CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_009767	Roseiflexus castenholzii DSM 13941, complete genome	102 crisprs	csm3gr7,csx19,csm2gr11,csx10gr5,cas10,cas6,cas3,cas7,WYL,cas5,DinG,cas4,PD-DExK,csm4gr5,csm5gr7,csx1,cas1,cas2,Cas9_archaeal,c2c9_V-U4,csa3,RT,csx15,csx3,cas8b2,cmr5gr11,cmr6gr7,DEDDh,cmr1gr7,cmr3gr5,cmr4gr7	36	89	1	1

1. NC_009767

CRISPR-Cas detection and classification

Crispr_ID: NC_009767_1

• CRISPR_ID: NC_009767_1
• CRISPR_location: 142939-143027
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_1

Consensus_repeat	Method
CCAGGACCCTTGAGCGCGCGGGCGCGCC	CRISPRCasFinder

spacers of NC_009767_1

>1.1|142967|33|NC_009767|CRISPRCasFinder
TCTGTCGCGCCTGTACGCCCGCATTGCTCAGAC

CRISPR arrays and Neighbor proteins around NC_009767_1

CRISPR arrays

The CRISPR arrays of NC_009767_1

>merge|NC_009767|1|142939-143027|CRISPRCasFinder
CCAGGACCCTTGAGCGCGCGGGCGCGCCTCTGTCGCGCCTGTACGCCCGCATTGCTCAGACCCAGGACCCTTGAGCGCGCGGGCGCGCC

>NC_009767|1|1|142939-143027|CRISPRCasFinder
CCAGGACCCTTGAGCGCGCGGGCGCGCC	TCTGTCGCGCCTGTACGCCCGCATTGCTCAGAC
CCAGGACCCTTGAGCGCGCGGGCGCGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_011997660.1|141787_142405_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|173926
NC_009767.1|WP_157042492.1|149100_149253_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997669.1|154991_156293_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009767.1|WP_157042493.1|149775_152340_+|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl|CDD|335469
NC_009767.1|WP_011997663.1|144594_145233_+|cyclodeaminase/cyclohydrolase-family-protein	unknown	unknown	gnl|CDD|377428
NC_009767.1|WP_011997664.1|145305_146256_+|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223566
NC_009767.1|WP_011997656.1|138017_138929_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009767.1|WP_011997661.1|142578_142926_+|hypothetical-protein	unknown	unknown	gnl|CDD|372376
NC_009767.1|WP_011997657.1|139331_139541_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997667.1|153078_154194_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_157042752.1|154197_154920_-|trehalose-utilization-protein-ThuA	unknown	unknown	gnl|CDD|153236
NC_009767.1|WP_011997658.1|139672_141034_+|aspartate-aminotransferase-family-protein	unknown	unknown	gnl|CDD|223238
NC_009767.1|WP_011997659.1|141026_141791_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_011997662.1|143240_144605_+|histidine--tRNA-ligase	unknown	unknown	gnl|CDD|273080
NC_009767.1|WP_011997654.1|135102_136470_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270451
NC_009767.1|WP_011997655.1|136890_137790_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_009767.1|WP_011997652.1|132881_133745_+|MgtC/SapB-family-protein	unknown	unknown	gnl|CDD|224204
NC_009767.1|WP_157042494.1|156491_158147_-|amino-acid-permease	unknown	unknown	gnl|CDD|223605
NC_009767.1|WP_011997665.1|146792_149102_-|recombinase	unknown	unknown	gnl|CDD|153085
NC_009767.1|WP_011997653.1|134043_134799_-|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl|CDD|274328

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_011997660.1|141787_142405_+|GNAT-family-N-acetyltransferase	gnl|CDD|173926	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.	1.08536e-05
NC_009767.1|WP_157042752.1|154197_154920_-|trehalose-utilization-protein-ThuA	gnl|CDD|153236	cd03142, GATase1_ThuA, Type 1 glutamine amidotransferase (GATase1)-like domain found in Sinorhizobium meliloti Rm1021 ThuA (SmThuA). Type 1 glutamine amidotransferase (GATase1)-like domain found in Sinorhizobium meliloti Rm1021 ThuA (SmThuA). This group includes proteins similar to SmThuA which plays a role in a major pathway for trehalose catabolism. SmThuA is induced by trehalose but not by related structurally similar disaccharides like sucrose or maltose. Proteins in this group lack the catalytic triad of typical GATase1 domains: a His replaces the reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. S. meliloti Rm1021 thuA mutants are impaired in competitive colonization of Medicago sativa roots but are more competitive than the wild-type Rml021 in infecting alfalfa roots and forming nitrogen-fixing nodules.	4.18375e-123
NC_009767.1|WP_011997669.1|154991_156293_-|PAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	4.98216e-43
NC_009767.1|WP_157042493.1|149775_152340_+|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl|CDD|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	4.44607e-47
NC_009767.1|WP_011997663.1|144594_145233_+|cyclodeaminase/cyclohydrolase-family-protein	gnl|CDD|377428	pfam04961, FTCD_C, Formiminotransferase-cyclodeaminase. Members of this family are thought to be Formiminotransferase- cyclodeaminase enzymes EC:4.3.1.4. This domain is found in the C-terminus of the bifunctional animal members of the family.	2.51598e-67
NC_009767.1|WP_011997664.1|145305_146256_+|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	6.54087e-53
NC_009767.1|WP_011997656.1|138017_138929_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	6.93599e-89
NC_009767.1|WP_011997661.1|142578_142926_+|hypothetical-protein	gnl|CDD|372376	pfam12905, Glyco_hydro_101, Endo-alpha-N-acetylgalactosaminidase. Virulence of pathogenic organisms such as the Gram-positive Streptococcus pneumoniae is largely determined by the ability to degrade host glycoproteins and to metabolize the resultant carbohydrates. This family is the enzymatic region, EC:3.2.1.97, of the cell surface proteins that specifically cleave Gal-beta-1,3-GalNAc-alpha-Ser/Thr (T-antigen, galacto-N-biose), the core 1 type O-linked glycan common to mucin glycoproteins. This reaction is exemplified by the S. pneumoniae protein Endo-alpha-N-acetylgalactosaminidase, where Asp764 is the catalytic nucleophile-base and Glu796 the catalytic proton donor.	0.00672549
NC_009767.1|WP_011997667.1|153078_154194_+|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.34847e-67
NC_009767.1|WP_011997658.1|139672_141034_+|aspartate-aminotransferase-family-protein	gnl|CDD|223238	COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism].	1.16853e-177
NC_009767.1|WP_011997659.1|141026_141791_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	6.6388e-22
NC_009767.1|WP_011997662.1|143240_144605_+|histidine--tRNA-ligase	gnl|CDD|273080	TIGR00442, hisS, histidyl-tRNA synthetase. This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff. [Protein synthesis, tRNA aminoacylation].	2.47426e-141
NC_009767.1|WP_011997654.1|135102_136470_-|ABC-transporter-substrate-binding-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.07048e-95
NC_009767.1|WP_011997655.1|136890_137790_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.63118e-98
NC_009767.1|WP_011997652.1|132881_133745_+|MgtC/SapB-family-protein	gnl|CDD|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.52332e-43
NC_009767.1|WP_157042494.1|156491_158147_-|amino-acid-permease	gnl|CDD|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	4.12867e-15
NC_009767.1|WP_011997665.1|146792_149102_-|recombinase	gnl|CDD|153085	cd01676, RNR_II_monomer, Class II ribonucleotide reductase, monomeric form. Ribonucleotide reductase (RNR) catalyzes the reductive synthesis of deoxyribonucleotides from their corresponding ribonucleotides. It provides the precursors necessary for DNA synthesis. RNRs are separated into three classes based on their metallocofactor usage. Class I RNRs, found in eukaryotes, bacteria, and bacteriophage, use a diiron-tyrosyl radical. Class II RNRs, found in bacteria, bacteriophage, algae and archaea, use coenzyme B12 (adenosylcobalamin, AdoCbl). Class III RNRs, found in anaerobic bacteria, bacteriophage, and archaea, use an FeS cluster and S-adenosylmethionine to generate a glycyl radical. Many organisms have more than one class of RNR present in their genomes. All three RNRs have a ten-stranded alpha-beta barrel domain that is structurally similar to the domain of PFL (pyruvate formate lyase). Class II RNRs are found in bacteria that can live under both aerobic and anaerobic conditions. Many, but not all members of this class, are found to be homodimers. This particular subfamily is found to be active as a monomer. Adenosylcobalamin interacts directly with an active site cysteine to form the reactive cysteine radical.	3.16163e-98
NC_009767.1|WP_011997653.1|134043_134799_-|SpoIIE-family-protein-phosphatase	gnl|CDD|274328	TIGR02865, Stage_II_sporulation_protein_E, stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs. [Cellular processes, Sporulation and germination].	1.86595e-18

Protein sequences

>NC_009767.1|WP_011997661.1|142578_142926_+|hypothetical-protein
MKQRLWGSIAGLLNIARRLTGTLLLIIGILGLLLPVLPGWSLIIPGVALLGRRDRLVRLSHLAVRYALRWMRRRRQRHLRTLGWRLTSEYGRTRRIVLPAIVATERAVARALAWG
>NC_009767.1|WP_011997660.1|141787_142405_+|GNAT-family-N-acetyltransferase
MSEIVIVNTRPEHIDQLVQHQRICFPTLADHELMRREHFESQLRLFPEGQHVALDGDRVVGQSSTFRISGAIALAPHTYHWIVAGNFFTNHDPEGEWLYGADMSVHPDYRGRGISRMLYNARKDLVRRLGLRGMVGGGMIPGYVRYRDQMSPLEYAQAVAAGLLTDPTLTPQLRAGFELRGILPNYIEAGELGNDSTLIVWENRG
>NC_009767.1|WP_011997659.1|141026_141791_+|Uma2-family-endonuclease
MAEVITAPAVIEYPESDGKPVGETDVHRREILHIVETLDRHFRHVPDIYVSGNLMFYYEEGNPSAVVSPDVFVVKGVRKGLRRTYKLWEEGAAPCVVMEMTSRSTRLEDKGNKRALYAMLGVREYFLFDPLGEYLKPPLQGFTLIDGEYTALPFEADGSIISHELGLKLYRDDTMLRLIDLTTGKEVVRTEHLSDALQDALAQAQSAQEQARLAEEQARLAEEQARREAEARRAAEAELERLRVELQRLRGEDV
>NC_009767.1|WP_011997658.1|139672_141034_+|aspartate-aminotransferase-family-protein
MTATPTRSIILRTTIPGPRSRELLERRAAAVPNGLYKAHQIAIESASGALVTDVDGNTFIDFVGGIGVLNAGHCPPSVVAAIQEQAAKLIHFSALVGTYEPYIALCERLNALAPISGPCKTILSNSGAEGVENAIKIARAATGRQAIIAFEGAYHGRTLLTLTLTSKYTFKKTFGPFAPEVYRAPFPAAYRMGVSEEEAVERCWEAFERILVAHVGPEAIAAVIIEPVQGEGGFIPTPREFMRRLRDFCTRNGSILIADEVQCGFGRTGTLFAMEQMAVEPDILVSAKSIAAGMPLAATTGRAAIMDKAHIGGIGGTYGGNPLACVAALEVVRMFDDGELLRRAKQIGAIVRERGAIWLRDIPLVGNVRGLGAMLAIELVKDRATRAPAADEVLEVVQYCAEHGVLTMRAGLYANCIRLLMPLVITDDQLHEGLDVLEEALHVVAQQKGGGHG
>NC_009767.1|WP_011997657.1|139331_139541_+|hypothetical-protein
MVRWMADEELAALLRRYYSGEGGLWPTIRERVAAELRRRGIEGARHIRFRRRDDEYEVIIEDASGYEPE
>NC_009767.1|WP_011997656.1|138017_138929_-|sugar-ABC-transporter-permease
MSVFSVPRLRANAREWRESVLFLLLVGPNLLLLAAFTFWPMIYNAYLSTISWNFLSPIRRFVGLRNYETVLSSEIFRVVLINTAVFTVVSVAATMALGLGLALLLNQPLRWREGTRAVLFTPTVLSGAAIAIVWIYIFDPRFGLLAQILGWFGILSPNWLADPNWAMTALLIVYIWKNTGYAVVIYLAGLQTIDRTLYEAARIDGAGPWGQFWHVTLPGLSPIIFFLLVTSILACFQAFDIIRVMTDGGPVNATNMLVYHLYERGFIQSQAGPAGVVAMVMFVLMLILTLLQLRFLERRVHYS
>NC_009767.1|WP_011997655.1|136890_137790_-|carbohydrate-ABC-transporter-permease
MEQQAGLQQRAAMKRHGRRQRARALQQRLLWRMAGYAAIIVSVLVIGLPIYWMLVASLKTSREIYIVPPTWIPLNPTLDNYPDAWRAAPFARYYINSIIVTLATTLSKMTLAVLTAYALVFLRFPGKNIVFLIVLAALMVPAQITIVPNFLTMGDLGLVNTYWGLILPGAATAFGTFLMRQYFMTLPREVFEAAEIDGAGHMRRLWEIAVPLAMPALVTTGLFAVVNEWNEFLWPLIITSTEDMRTLPIGVARLLDQEGLARWGVVMAGTMFVVLPVVVLFVWAQRYIVEGIAAGAVKG
>NC_009767.1|WP_011997654.1|135102_136470_-|ABC-transporter-substrate-binding-protein
MAKINRRQFLRGVAAGAGALTLAACGGAATTSPTGEPAAPPATAAPPTAMPQGSMGSTVEITYWGSFSGVLGEAEQATVETFNSMQQDVRVNYQFQGNYEETAQKLTAAVQARQTPDVSLLSDVWWFSFYINGQLQPLDDLMAAEGVKREAYVDVLLNEGIRKNTVYWIPFARSTPLFYYNKDAWAEAGLDDRAPKTWEEFMEWAPKLNREGRSAFAHPGAASYIAWLFQGVIWQYGGRYSDPDFTIRIHEENGIRAGNFYRDTTQTYKWATTPKDVTQDFVTGLSASAMLSTGALAGVEKNAQFPVGTGFLPEGPSGFGCCTGGAGMAVLSGLPAEKQQAAMKWIAFATGDEWAVDWSQRTGYMPVRKAAVESERMKQYLAERPNFRTAVEQLPKTRPQDSARVYVRGGDQIIGKGLERITIAGEDPAKVWMDVKAELEETAKPTVELLKTVEG
>NC_009767.1|WP_011997653.1|134043_134799_-|SpoIIE-family-protein-phosphatase
MLHIDIAVVKVPRYGASESGDTLEVIERPGGGLSVVLVDGQGSGRGAKTLSNLIATRAISQLKDGARDGIVARAVHDYLYTYRMGQASATLNILSIDFASGSLRVSRNNPAPFFVLSAEQVQLHNEPSTPIGLYPSTRPVITELALHSGLQIVMFTDGLLKAGERYGVDMELGNYLAGWRSESDDPATALAEALLNRAMELDRNEPTDDISIVVAAVVGRTSPHRARRMTVSVPIERIIECHEDGGNGVGD
>NC_009767.1|WP_011997652.1|132881_133745_+|MgtC/SapB-family-protein
MRGEGVMQDIVTELVRLLGPINLDVIFRLVLTMILCGLVGLERSGHERASGFRPHILVGLGACLVTMAGAYGFADLTGERDALRVASYVVSGIGFMGAGAILRHGTTVRGLTTAATLWGCAGIGVTVATGLGWLAIAGTVLFLVTLTILEWFEMRLNFGSPVSRLRIHLHDDNRAVGKALDALARLGAPVKRATVLPGAGTSALLDVELARALTADQAPLLAKQLLTLKKYVVQVDTTVAPLDEPSDDEELAEAQEGEVAPLNLSDDDLLRDLNDSDEKEKTLAPRA
>NC_009767.1|WP_011997662.1|143240_144605_+|histidine--tRNA-ligase
MSSRVQNIRGMRDHLPSAMILRQHIINTLTSVFERYGFEPLQTPIVEYAETLDGKIGDDEKLIYRFEDHGGRKVALRYDQTVPLARVVAQYQGQLTFPWRRYAIGQSYRGERPGRGRYRELWQADIDIVGSASPVADAEILAVLTDALTALGFTGFTTLISHRQVLGGIARVSGLDDASAGNVYRAIDKLDKIGIDGVRNELLQSGVTPDAAERILALIDLYGSADDVLNELAQRLHDDERAQQAIDNLRAIIGYARAMGVPEERIAIAPRLARGLSYYTGAVFESIIQEPPMGSLLGGGRYDELIGMFAGRSIPTVGLAFGIERLHDVMEALGMGPESRTIAVALVTLFNPEMAMESLGLAQELRRAGLMIETTLDPSEKLGRQLQYADRRGIPYALVLGPDELARGEVVVKHLRSGEQRSVARSAVAGMLHAAAEAQRTPRIANEQGGIHER
>NC_009767.1|WP_011997663.1|144594_145233_+|cyclodeaminase/cyclohydrolase-family-protein
MSDRLLETTVGQFLDRLASSAPTPGGGSVAALTGAMAAGLITMVCDLTIGKKQYAEFEAEAKAIRERAEAYRAELQQLAQADIDVFNQLSAVYKLPRTTEADAASRRAAIQTVMRQATEIPLRTARAAAALLPLCAPLARYGNRTAVTDVAAAALLIRAAVPAALINVESNLAVIEDQIFAREARAQAEDLLMGLDGEVEGVLTLTRTRLKG
>NC_009767.1|WP_011997664.1|145305_146256_+|NAD(P)/FAD-dependent-oxidoreductase
MHDLIIVGGGAAGLAAAAYALDKQLDVMVVYENLGGKINQKFTMHADTDFLVGHILVHLDAPETTSEEVTRLGAETVQEFERQVTTQRGRALFDRVRRVTKEGDVFKVETERSGTLQAAAVIIASGAVPKQIDAPGREFINHGIGYTPVTFARALAGKTAVVIGCTQRALRGAAELAPTAAQVYLVAPKFPHDDPVFAVLRKRPNVEVLEGYTVTEVTGTTTVDTVVVEQDGKVRRIPVDAAFADVGLTPNSAMVKDVVETDADGFIIVDKRNATSLPGLFAAGDVTTVYGEHTLIAIGEGARAALAAHDYLLARG
>NC_009767.1|WP_011997665.1|146792_149102_-|recombinase
MTQSHTARNGTHDTGSIDVRHPDVIVPTTIIKRDGRVVPFDVTRIENAMARCFASFGRTPDTPIPELAQRVVNIVAAKSQGKPPTVEGVQDIVEMVLQAAGEFEAAKRYILYRAERARERERRPIPDHVRRAFDEARVYFPTPLQQFQFFDKYSRFNYDLGRRETWIETVDRAVDYLHELAGDRLPRETYERIRRSILEMRAMPSMRLLAMAGPAARRNAVAIYNCSYQPVESIDSFVEALIISMAGCGVGFSVESRYVENFPRIKRQTGKPPTTFVVEDSAEGWADALRYGLETWFEGGDVHFDLSHLRPAGAPLRTKGGRASGPEPFRAMLDFVRNRIFARQGSFLRPIDAHDIMCAVGNAAVSGGVRRTAMISLFDYDDDEMRLAKSGDFERENSQRWNANNSAVWPRGGLTQLEFIRHFMEMVESQRGEPGIFNREASNLMKPARRKEAEFGTNPCGEIVLRPWQFCNLSAAVARVDDTFDTLRDKVEVATIIGTIQSLATHFPGLRPMWRQNCEEERLLGVDITGQMDSPVAQDAQVKRRLKEIAIEVNRQTATSLGINSSAAITCVKPSGNSSQLLDCASGLHARWAPYYIRNVRVSVHSPLFKVLRDAGAPMDPENGQTRENATTWVVHFPVKSPEGAVTRNQRSAIEQCEYWLQNKLYWTEHNPSCTVTYKPDEVIDLMKWVWDHRDVIGGLTFLPSFDAQYAQMPYVEITKEEYERMAAEFPEIDFSKIWRYEEEDLTTAAQELACMAGVCEVDALPAGQ
>NC_009767.1|WP_157042492.1|149100_149253_+|hypothetical-protein
MNPRPPETRQEIPRGALIGCQIRCTAYHYVKQFSYGQAGQNTLTPVTGTT
>NC_009767.1|WP_157042493.1|149775_152340_+|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MYCKKRCIIACTHAHLSQVASGHVSPVLLDRSTPLAYHRTIASQLLRSAPIAGLAASGSGHLPLTEIYVERGIVPARNRSSSAPSSLADLARAPRARLALEGSAGSGKSMAVRWLALACAAAVAGEPEGAATIFADWMPPAPLPVLLEASAFVAAAEPWSLIEAQLSASGLAAFAGSVHQALLNGEALIVIEDVTPRSIAMVTQIVAAFPANRSICTCRPHTSTNSSPAHLLQAHGFQLVHFAPLERAQVDTLVERLLTAMNRRRAVREVSGAAPSAMLRSGTIAEQIADLQGRLLIDDGLRALTFEPLAAAIAVAVDAGGHTLPAARARVYQQVIAALWGNDALPPTVLAPLALAMQRAAHDDGRSGALMRPDVERLIREGVPDADESQIAAVIEHAFETGLLDITTSETLQPAYHMPQMGLRAFLAARALAHAEDFDAIIARYADDPAWRETLTLAVWQRMNALPADDGQGQGADLSIFRHLLDRSEHGKQDRDERSAKKKPSRRAPKPIPVPQHGAGASAIAPAQATLLAAACLEAIEAQRYPDILRDVQQRLLAMVADPAVAVEDRVLAGLMLGRLGDPRFESLLPPLAQIDAGVFVYGTNDAPYSEEGPAQRIDLPAYQIGVYPVTNAEYARFLAARPGHPKPHYWYDPRFNNPSQPVVGVTWHDAVAYAAWLTRALAAEGRLPTGMVVRLPLETEWEKAAVWGPRARVKRRFPWGDQWVAGAANVAETRVGPDGKSRWATTPVGCFPGGISLYGVHDLIGNVWEWTASSTEAAPGRGAATGQRTALSRLYGDPSGAPMQRHHYVLRGSSFNSTTAHARATYRGSHLPPDYWRYNIGFRIVIARPIAGE
>NC_009767.1|WP_011997667.1|153078_154194_+|glycosyltransferase-family-4-protein
MNIAFIDSWVQSSVEGSGTAVAINGLQHTLQKRGIRVTRLAPPQPWPRNLTARRLLFNLHLPTILRRLRYDLVVGFDIDGFLWSKQERHTPYLASIKGVLAEESRQERGAVRRLLWSLSRLEGINARNADGVITTSDYCRGAIRRHYDVAEQRVRLVPEGIDLTRWRRIAREAPPRSDGATILCVARQYPRKRITDLVRAMPRVRAAVPNAHAIIVGDGPEHAGLRALVAELRLGDAVNLTGAIPDDDIVAQMYYRADIFCLPSIQEGFGIVFLEAMASGLPIVATTATAIPEVVPHRRAGLLVPPGDVDALAEALIELLRNPDQRAAYGAFGQAHVAAYDWDCVADRFLEQVESFMRTPTERLAHPFLTP
>NC_009767.1|WP_157042752.1|154197_154920_-|trehalose-utilization-protein-ThuA
MVTPIRVAVWNEFRHEQDSRHPASSIYGAQGIHGAIAEGLREHGGFEVRTATLDEPEHGLSDDVLATTDVLIWWGHMAHHLVQDAVVDRVHARVLDGMGLIVLHSGHFSKIFRKLMGTTCDLKWREADDIERIWVVEPGHPIAAGLDECFELPEEMYGERFDIPAPEQLVFISWFTGGEVFRSGCCYTRGRGKIFYFRPGHESYPTYRDSNVRRVIANAVRWAAPSGGPKPVFGNAKPRS
>NC_009767.1|WP_011997669.1|154991_156293_-|PAS-domain-containing-protein
MSGDSTSSDTDFVHRIARLEADLEAAHRRIAELERVVERGYGMVDAIPAMVYFKDREHRYQYGNRAFTERIRVSAEEMAGKTDYDLFPPEVAAAYLADDERVMATGEPSLGIELPVSRPDGTIGWVSNSAVPYRDRSGAVVGMVGIAIDITRRKQIEEALRRNQEVQRALLDTIPAMVYLKDRQHRYLLGNRVFADAAGISVDEVEGKTDHDLFLPEEAEAYIADDEQVMATGEPHLGIEEKITEANGRVTWLMVYKAPFRDEQGRVTGMVGIAFDVTARKEMEEALRRSQAEQQALIEQQAQLLATIRQLSTPVLPVTQDALVLPLIGDIDTARSQQIVETLLNSVQRYRAKWAIIDITGVPLVDTAVANHLIQATQGVALLGARTILVGVSPELAQTIVGLGVDLKGLISQSDLRSAIAFVLKRSQQRSFV
>NC_009767.1|WP_157042494.1|156491_158147_-|amino-acid-permease
MRRRNVAGRSQSIAAPRAFARKATGLVRQAGMIDVLVYNVNFISIGLMVALMLLIIPSYAGGNIYLSLLFCALLALPTACVYAFLSAAMPRSGGDYVYVSRVLGPALGMMGSWNMTIWWILYGGVPSAFLATYGVAPFCRVLAAMTGNATLIGVADWTVTPTGQFVVGALLILILTTLFTIGLKSFFRVQNILFLLATLSAFVALIVGLTANAAAFPDVFNRYVGALNGQPDTYQQIVNASGYAAAPFDWMNTLLPMTWIYLTMGFSFSSAYIGGEVKQAARLQTWAIPGTVIYAAVWGFLLVWATTRAVGADFLGAVSTLGDLGAESVGLSAMPRFHELIAYASQNPLVAFLICFGFIFWSYAWLPGQILNASRNLLAYAVDGLMPARLATVSERFHTPVVSLWIMGILSIVSLAIYVFTPYFATLSGIFGFILTFMLVSLAAVLLPYRRPEVFEGSPVKWRVAGVPVISIVGVLSLAACTVMEWAYLNDPFSGISLDPSTLSEGVLGFGMFLINIGIFLSGLIVYVVAQAIRRRAGIDVSLNYKDIPVE

Crispr_ID: NC_009767_2

• CRISPR_ID: NC_009767_2
• CRISPR_location: 275871-275975
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_2

Consensus_repeat	Method
CCCCCCTTCTCCCACAAGGGGCGAAGGGGG	CRISPRCasFinder

spacers of NC_009767_2

>2.1|275901|45|NC_009767|CRISPRCasFinder
CATTTTCGCGGCGGGTTTCGTGGTTACGCTCAAATAATGACCTTC

CRISPR arrays and Neighbor proteins around NC_009767_2

CRISPR arrays

The CRISPR arrays of NC_009767_2

>merge|NC_009767|2|275871-275975|CRISPRCasFinder
CCCCCCTTCTCCCACAAGGGGCGAAGGGGGCATTTTCGCGGCGGGTTTCGTGGTTACGCTCAAATAATGACCTTCCCCCCCTTCTCCCACAAGGAGCGAAGGGGG

>NC_009767|2|2|275871-275975|CRISPRCasFinder
CCCCCCTTCTCCCACAAGGGGCGAAGGGGG	CATTTTCGCGGCGGGTTTCGTGGTTACGCTCAAATAATGACCTTC
CCCCCCTTCTCCCACAAGGAGCGAAGGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_041330123.1|277461_277932_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240032
NC_009767.1|WP_011997766.1|285007_285832_-|peptidase	unknown	unknown	gnl|CDD|235334
NC_009767.1|WP_011997751.1|263359_264742_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042754.1|279587_281126_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173810
NC_009767.1|WP_011997752.1|264775_265093_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330122.1|274987_275602_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_011997765.1|284370_284790_-|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NC_009767.1|WP_011997763.1|282537_283413_-|hypothetical-protein	unknown	unknown	gnl|CDD|226582
NC_009767.1|WP_049768774.1|278214_279036_+|metallophosphoesterase	unknown	unknown	gnl|CDD|224327
NC_009767.1|WP_011997760.1|279032_279581_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997753.1|265159_271948_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274350
NC_009767.1|WP_011997756.1|276016_277459_-|glycosyl-transferase-family-1	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_157042498.1|283405_284359_-|FAD:protein-FMN-transferase	unknown	unknown	gnl|CDD|224394
NC_009767.1|WP_011997746.1|256813_258535_-|hypothetical-protein	unknown	unknown	gnl|CDD|379080
NC_009767.1|WP_011997747.1|258893_259826_+|1-phosphofructokinase-family-hexose-kinase	unknown	unknown	gnl|CDD|274464
NC_009767.1|WP_011997749.1|261026_261710_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009767.1|WP_041330121.1|260052_261024_+|MoxR-family-ATPase	unknown	unknown	gnl|CDD|223786
NC_009767.1|WP_011997762.1|281851_282343_-|heme-binding-domain-containing-protein	unknown	unknown	gnl|CDD|379587
NC_009767.1|WP_011997750.1|261990_263247_+|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|225567
NC_009767.1|WP_011997754.1|272114_274709_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_011997766.1|285007_285832_-|peptidase	gnl|CDD|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0.00130415
NC_009767.1|WP_011997765.1|284370_284790_-|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	4.23474e-07
NC_009767.1|WP_157042754.1|279587_281126_+|S8-family-serine-peptidase	gnl|CDD|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	3.18271e-124
NC_009767.1|WP_011997754.1|272114_274709_+|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.46102e-08
NC_009767.1|WP_011997763.1|282537_283413_-|hypothetical-protein	gnl|CDD|226582	COG4097, COG4097, Predicted ferric reductase [Inorganic ion transport and metabolism].	2.83519e-07
NC_009767.1|WP_049768774.1|278214_279036_+|metallophosphoesterase	gnl|CDD|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	1.54918e-16
NC_009767.1|WP_011997753.1|265159_271948_+|tetratricopeptide-repeat-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	5.31769e-53
NC_009767.1|WP_011997756.1|276016_277459_-|glycosyl-transferase-family-1	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	9.26609e-21
NC_009767.1|WP_157042498.1|283405_284359_-|FAD:protein-FMN-transferase	gnl|CDD|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	1.19373e-61
NC_009767.1|WP_041330123.1|277461_277932_-|NUDIX-domain-containing-protein	gnl|CDD|240032	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	3.75974e-46
NC_009767.1|WP_011997747.1|258893_259826_+|1-phosphofructokinase-family-hexose-kinase	gnl|CDD|274464	TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family. This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.	2.96116e-82
NC_009767.1|WP_011997749.1|261026_261710_-|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.64345e-42
NC_009767.1|WP_041330121.1|260052_261024_+|MoxR-family-ATPase	gnl|CDD|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	8.19562e-102
NC_009767.1|WP_011997762.1|281851_282343_-|heme-binding-domain-containing-protein	gnl|CDD|379587	pfam14376, Haem_bd, Haem-binding domain. This domain contains a potential haem-binding motif, CXXCH. This family is found in association with pfam00034 and pfam03150.	3.01409e-56
NC_009767.1|WP_011997746.1|256813_258535_-|hypothetical-protein	gnl|CDD|379080	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.	1.21066e-05
NC_009767.1|WP_011997750.1|261990_263247_+|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|225567	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane].	2.47658e-36
NC_009767.1|WP_041330122.1|274987_275602_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.46067e-31

Protein sequences

>NC_009767.1|WP_041330122.1|274987_275602_-|Uma2-family-endonuclease
MTVTAAVQPMWIAIANQITDIDLTALQGTWSVAQYLALTAHTNRLIEYTDGVIEVLPMPTEKHQAISLVLLLSFLAFVRPRGGVAFYAPLRLEIRPGKFREPDLLLLLRSDDPRRQNDYWRGADLVAEIVSADNPARDLEEKPRDYAEAGIPEYWIVNPLDETITVLTLAGDAYAPYGVFRRGVAARSRLLDGFAVRVDEVFDA
>NC_009767.1|WP_011997754.1|272114_274709_+|tetratricopeptide-repeat-protein
MTTARSSLETIELPHLVRAIELALRLGDSGAAWRAAHALRRVFPEAIAPQVWLGQALLDAGNAAVAVDYFRRALRLNPLDANAWAGLAGALARTGEAKAATAALNRAVLHDPLGSIALTPGIAPEPSTAGKGIEYLHRGLAELAVAELATALARFPRRDDLRFYYIEALRRSGDLAGARHALTHLTSPDAGRLPALLARAALHEHDTAAKRYCAAYDPDGRLTRRFFAPEAPPWMLPPPPVVRWSEEFDPVRPYLEHLTAYHALPATAGSHTCATQPLAAPKRLPETSDPPSPATGAGKEQDAALSARASDARQPESTDPEVKHFLAIAERVRQRLIDASAAPRPLVPYADGRTFTQVTLSSRTALQRRFGADGCAALDQRLQQYAMALQQRGVMAHICYYDDADTLRLDDGIAAAPVAVEAGALRDLLRTLSGALSERGRTLGAVLIIGGDDIVPFHRLPNPLPDDDVVVLSDNPYATDDPAYVAPQRMVARLPDGNVGDPSLLFAQLDRMTAYHYGSRPQLRRLQRSSGRRLARDAPPLDVLSAGYCAEIWKDASRAVLDALTADAPLTSSPPHLAENLDLRTLSGRRLLYFNLHGAAGLPNLYGQPDAVWPGAATRLPVALRPDQIDDTTADGALILSEACYGAELAGRTVDASIPLRALAHGALAFVGATVNAYGSLTNPLIGADLLFHAMMKHLARGEPIGRALHQARIEFAQEMYRRQGFLDDVDIKTLIEFVLLGDPWGALYDANIEPKPWNTDRTIVAVERMPKPRARVVLDEAEAPRDALQRARAILRRVLPHGAALPLRITAQLNPRRQRKSDPERDLTFSARDHVPTVDGQSVAHTAHVTISGQAVVKVALTR
>NC_009767.1|WP_011997753.1|265159_271948_+|tetratricopeptide-repeat-protein
MAVQLAGWAHRYLEALCGQSNFSAARTVAPLWLATDAAHTPEVGVPVSAPLTIQMAAEIFPRLALIGPAGAGKTTSLRALAIGLAEAFLSGNSRTAWSGAHAPLPLYIELARFRGSIEATLADTFGIGAPPPLDELARDRPLLFLLDGLDELPPATQLTGLAALSHTLAATGAQTRWISTCRSEYLGLFRPWLNGAEVRVLQPLRPRDVVAQLQRQVGDGAAAWIQRNDDILQLATRPRWLTALIEAREALNAPIQSRGRLLATWMPALVTTALAAHPRSIPASQAVHALTTIAHLLEHQGQTELTLDSAITAIEVSAYVSDTQVTARALRQSPLVHERTLRAATGEAAILALIDAGILNFDAERRLIGFHHPLLRSFAQALLLARTRPDQWSASILSRTWTDAVIFAYSLSEDREAVVRRLLASGAVGLTARCLIDAEAPAHYDELLERSGSLTPPLRVMIADAFAAEGLDRAALEQLERAGNEGYDEAGLFGRLGDLYCRSGQWRLARVAYEQALAREADDLRYRQQLGVVCSRMGELEQAAAALETVLDAQQKRSAAAAHELGHVYLQQGRFARALEAYRHAAQQQPGEPAYRRSVAVALRRLGRLEEAEAELRDLIAASGSDAATYAELGEVYADAGHNAKAVESYARAVALRPDDPMLYARLGQVRRSIGDWSGARAALQRAVELDSSNAALQDELGQALEACGEMESALAAYRAAVSLDPQCATYHRRLGALLRNCGDNDGAAAALRTALELRPDSAATYGELAELLWRTGDTDQALDAYRRAHALAPESPDHTRALGLAYRRLGRSRDAERLLRQALTLAPERADLHYDYGIAAEALEQWDTALAAYEQAAMLDPQCADYARAAGALLLRRGDLARARSLLAVALRRARRDPETLFQVGMLHAAAGAWHLAARSFQRAARLSGSAQHESALGRAYLHLSMADEACAAFERALLLHPDDIETLDAYQTALESCGRLEAAYSVGRRVARLAPGNAAIQQRVGSLALRLGRVNEALELLDRAVALDSRLVAAHLDRSRALLAAGRAEAALAAAQQAHTLAPDQALPLALAAEALITLRRDDEARPLLERALALDATLLSSCVALRDLLARADDYAAAVSLAQRAVALAPADISHHVRLGELLLETGDLTQAEQALQYALQYIASVDEEQRNRMSARIYALISRIRARIADWEQAVAYARASVDCAPGNSEYRALLADALEGAGNLAAAVAELESAAAAEPDRIDWQQRLGHFLYRIGNYSGALNALRRAAAGSGAAEDYYALGRCLCALSDLPAAAEALEQALRLRPDAASWRVELALVHLERGWHGEALAELNQAVATAPDRTEVRRARARALMAIGQLDHARADLVEALRREPRDAESYALLAEILLDLGHTLQALDSARRAATLQPDNPQYRRMLARALRASGRRAEAIEHLSGVVNDTSPPQWWEELADDHLALGHLPAARIALEHAVAAAPDQATTRFRLGDVLLRLGEPAAATEQLRIAITRRPDYAAAHARLAEALIASAIDSPDHLAAAVEAARLAVAVEGQCADHWRVLGAVLRMQGVLEDAVQALRRACELDPESASAAFLLGLTLLEQNNPAAAIAPLADAVALAPEIASHHGCLGIAHRLAVAPIVEPDDLRTAPPNRRAALTIARRSFQQAITLDPRCARWWYELGLTEQQSANHAPAVEAFARAMALADDHAVSMTTGVYPPLQGSERIAILRSRALSLYLVGRLDDARADLESVIAHNAALPADRYLLGRVLLDCGHATAARTELTSATASDPRHAQAHLFLGRACLALNEPQTAIDAIEQAAELRPDHAPTAAALSQAYAAAGRRERAIAAAQRAVRLDSSAGEHHHLLATLYAASGRLQEARAALINALTLQPDVAAWHAQMGDICQRMGMIDAARSAYARAVQLAPDHADYRYAQARLLRQQGRIDEARQVFEKALEHEPQQGAWHYELAELLRQQRDPAAIEHYAAAVQLAPDEPRHWLGLVEGLLERQERDAAQETVERALLRFGDHAALHAVAGALQEEQGEIERAAWHYEQALTRDPQNATYCWRLGRAQFELGNPDAARELLERALALDPGSADAHATIARLFASENDSRAALVHSQRAVELRPDDPALQIQLAEVLAQMRRFDEARQALERAVQRAPSDPELLARYGEMALTVGLYHEALGAFERAIAQRPDEPRYHFFAGRAHRRLKQYSRAIERFRRAVKLRPGYSEAVIELSTLGPLAFVAQHLRGESDAA
>NC_009767.1|WP_011997752.1|264775_265093_+|hypothetical-protein
MTTTIQIGMAITLFITGIGMLICGLVIIMTREYQEAMRSLAGQSSRLSSKALADIGVQAALDGAAHLLEAITRLVQTAIGTGAFLCLLGTIICGLAFWMMMMIGA
>NC_009767.1|WP_011997751.1|263359_264742_+|hypothetical-protein
MFIPLQHNQAEAIPTTDARQLQQDQRLRLLSREGRELRLGEYGAALFRVVLILICGIDLILYSTSHPALLAHGIALVIAVGALIAGLTVAMPLWALLMVDGAAAGTLILATGGAASPMLVLVPAIVVQGGLSVEERDTLASAGIGVIVLLLVAALDPAQANHLLIEIAAMHVIVSIAAVWSVRRTRLTLTRLHDEIAQRKRLDQDRNEARRALEWQRQNLAVLGACATLDDLAGRVVERAGAITGAPASFDDASASTSFSSHTLDITGMGRLVVQRTAAELDRSQRDALEHLVDTAAQRAVALRSIDMLDRHHRALMALWEGAGILRAAPHLNPTLLDVCQRIAAALDLNWMALIGPDERQMLAPLMIARGRAHMSPPRLQPVHFRLAAEVLRSGRSLVRVEQERTLAFLPVRVAGEPSLVLAARGAVDDAAVQALLLLLGDLIGERLAGCTHSREHHRC
>NC_009767.1|WP_011997750.1|261990_263247_+|N-acetylmuramoyl-L-alanine-amidase
MTVPINTSIRSPNYGSRGGRPISMIVLHATAGTARSALAWLTNPAARVSAHYLIDKAGQIYRLVPDEYAAWHAGRAAWRGETAINEVSLGIELENANNGRDPYPTAQLSALIRLTREKVAQYRIAPDMVVRHLDVAVPRGRKNDPAGFPWTEFLQHIFAETTIAAPDRPIPPSRRAALNQILLNEAYRQVGAVEWPDWAMTRAARLAKLGLPVAPSFEVTVEGRNYIGQSFGCETLVSPIAEWKRVDRLSALTAPEHQPLREALLQAIYAQAGETYRPDWAFHQYALREPVGPPLSASFRVRVGNEEWSAAIYALDVLYSPVGRWKEIGRLSALIEARGERDPLAEALLERLYERAGSQWRPMWPSQQYALRERLGAPLGPSFRVSFDGRDYVAEAFALDVLYCAIGEWDNVQRLSER
>NC_009767.1|WP_011997749.1|261026_261710_-|response-regulator-transcription-factor
MASRRARIVLADQQHLFRQGLAQLLRNAGHVVVGEADTLESLDRCMIDTEPEIVMLDRYLPGGDVFEYVHMLHTLQPQTSVLLLVAYEHEVQELQGQAFLTGASGCLSKELQSPAYLQAVRRMQDGQLLFPAEVLRRAARPQTISGPIASLSELTSRELEILQLIAEGLGNREIAARLDISYNTAMKHVSNILAKLKVSNRMEAGLLFLRHTADGTLPGVARQTRLR
>NC_009767.1|WP_041330121.1|260052_261024_+|MoxR-family-ATPase
MEDIKTIVERIAANVEQVIIGKRRAIDQALAALLCKGHVLLEDVPGTGKTMLAKAIARSIGCSFKRIQFTPDLLPSDVTGISIFNQRTHEFEFRPGPIFAQIVLADEINRATPKTQSALLEAMEERQITVDGVTHPLPQPFLVLATQNPIEYEGTFPLPEAQLDRFFMRIHLGYPERKDEIAILRRQRQAHPIETLTQVVAAEDLIDLQERIKSIYVDELIEEYIVSLVTATRNHEDVYLGVSARGSLALYRAAQAQAAILGRDYVLPDDVKALAEPVLAHRLIINPSARIRDISATDVISDVLKAVAVPGARAGRRFERVAR
>NC_009767.1|WP_011997747.1|258893_259826_+|1-phosphofructokinase-family-hexose-kinase
MLLTVTPNPAIDRVLIVRGFRKSDVCRVIERIDSAGGKGFNVTRAAITLGVPVHTCALLGGDNGRKIAALAQAEGLDGDWSWLSAGESRICLLITDPEARDHLTINETGPTVDPSDWTAFMELVWRQARDAAFIALSGSVPPGVTPAQYVELVRGLPPEAFVCIDTSGPTLAAALDLPVDLLKINIHELSAALGSAIDTPDQAITAAAHVLQRGPRRMIVTLGAQGAVAVDAHGAWHARTPPLDPISPVGSGDAALAGIIATLHHGRSLAEALRTGVACGAANTLMVGAGRMRRDDVMRLHAATNLIALR
>NC_009767.1|WP_011997746.1|256813_258535_-|hypothetical-protein
MGRTSVGRFSLARYWPEVVAFVIPLLVASALLFGYVGPLNGFWSTDQGVKLIQVQSLLLNKFSSSALIYPGAAIDQDDRVSPLRGQYYQHGGQTYAMFSDAFALISSVPFFFFGFAGLYLVPLVSLAALSLICTCIARPLLGPGGALLSALALTLTSPLLFYSVIFWEHLPAMLLTTLALWQSLEGYHRNERRRFFGAGIAIGAAAWLRNEAILAAPALIGAVLLTRRSQSLQTAAWIGIGAGAGVLPLLLYNQIVFGAAVGPHVLVAGAAQYRGASDPLMMRIEWADRLLVPLDEPVLAGLVIVLVIVSIITAIWRARSAANVGFALAIVVTIVIAAAIQRAPRGGLQTTLLMTFPAVLLCCFPVAPKERLDRVDTPLILTAFGLTFIALAWLALLPDGGAQWGPRMLLPAAPALTIAGFWRAGSWLRRPAAGAAVAGVSAIVLFVAMLSQCAGLRQLRDFNTANHTLLTTVAQSGASAIITDTWYGPPLLAPIFYDERMIFLVDDGADLDYLIERLSNAGFDTVYYLSGRRDEITSDARRWRELTPIGAPARLAHHLTGQLYQINTPPPSD
>NC_009767.1|WP_011997756.1|276016_277459_-|glycosyl-transferase-family-1
MKRLAYASPVNPAPSGISDYSEELLPYLGMYAEVTLYIEDGLRPTHPRLVQHLEIRPVSRLERDHRRRPFDAIIYHMGNSPAHLGIWRALQRTPGVVVLHDFVLHHFMLQEMVAVRGQIDRYRAEMRRRYGDEGARVAELMLRGRFPEAAFDFPFCEDVLERATGILAHSRYVLDRVTALKPGLATALVPMGVPLPMLIPRNEACERLGLPQNALILASFGHINPYKRLEPALRALRDLRAVHPDARYLLVGSISPNYDAPGVVERLGLTEAVTITGYVSRSTFEDYVAAADICLNLRHPTAGETSASLLRLLGAGRPTLVTATGSFTELPPGVAAQVDPDGSESDLILGYCRLLAERPDVAAAMGAAARKYVAHCHTLEGAARAYVEFLARHCGWGDIRPLRAAPLWDVEGRPPRRAAPRERLSFARDADQSAAQRAPAPPPLVQTVAEALIGLGVTGDDRAVLDAAARALAEIGFGRE
>NC_009767.1|WP_041330123.1|277461_277932_-|NUDIX-domain-containing-protein
MTINYTAWLRSYVGHQRLLQLAASAFIRNDRGHVLLGQRSDVMLWAPPSGVVQLGETPARTLVREVLEETGLHVVVERLIGLYTGREFEWTYPNGDQAQIVSAFFACRVTGGMLQPDHTEFVSLAYYPPDRLPPLMPRYVRMVRDAFAGRAEAAFD
>NC_009767.1|WP_049768774.1|278214_279036_+|metallophosphoesterase
MHISDLHAGRTFHPHVADQLTREARDLRPDLLIISGDLVQRADFVAQWKAITQYLQQLPEPRLIVPGNHDVPLFHLVERFFRPLDRYRRFISTDLNPVFERPGIVVVGGNSAHGLTIDGGYVSPEQQRTMAQLFVRYPDDVCKIAVLHHGVVRPPGCEKRSIVRNATDVTRMLEQSGVDVLLCGHHHVSYVGVAGSAKRFVVCQSGTSTSRRVRAGERGRNAYSVLTIEDATIHISQRRYVEMSGRFEPLGEYAFQRRGIWLPLHRRDTPQTL
>NC_009767.1|WP_011997760.1|279032_279581_+|hypothetical-protein
MTQEQTSQQQKVDTGPLPPLPPLPEPPPSPRQASRRTMLVAGIAVLAVAGIALWWFTRPSDPMSDPRPVQTVQNFVAATEARDVSRMLSYVEPTDLKRQISPELRSYMEYITDLQFKNETYTLVDNNGSIARVRLTGTVRYTVDYGSVYSGERSFDTIFELVLLEGTWYLRSLQLPELEQQQ
>NC_009767.1|WP_157042754.1|279587_281126_+|S8-family-serine-peptidase
MSLRILLALAIALFASASSPTDPRFDEQWALYKVGATCAWERTRGSADVIVAVVDSGVDPTHPDLAARLRSDGYDFVDNDADPRDENGHGTHVAGIIAAILDNNEGIAGLAPEVTILPVRVMNARGKGSDRAIARGIRFAADRGAKVINLSLGATLTLNADEPSALVNDAIIYAQQQGALVVVAAGNDAVPLPNAIAVDNPDVLVVAATDQRDHKAPFSNSGPWIAVSAPGVNILSTMPTYEVFLTSDQVPRDERFRRDYDYMSGTSQATPYVAALAALLFSANPDWSAAQVAETIRTNATDIRDLNPRFELGTGRIDACKSFGGPPAEQAPQPAPRPSAPRSESLLGLLALCVCGIVLALAFAAIALIGAGRRRSPRPAPAPVPVPVYAPPTPSSPPQPYQATPPVSTAQSAPTGAWGTLAVIAGAAQPRTYALSGAELVIGRSEECQIVLIGDGSVSRRHAIIRNNGRQVTVEDAGSSHGTYLNGARIIQPTPVRRGDVLQVGQTQLRFG
>NC_009767.1|WP_011997762.1|281851_282343_-|heme-binding-domain-containing-protein
MTTSIQQRTTSLDARRIAAGVLAGMMGLVLLIQFIPYGRDHTNPPVIAEPSWDNPQTRALFFRACADCHSNETTWPWYSNIAPASWLITRDVMKGRAEFNVSEWGRPDNEGDDAAKLVQNGEMPPWFYLPLHPEANLSPVERQQLINGLLATFGGEAEREDEK
>NC_009767.1|WP_011997763.1|282537_283413_-|hypothetical-protein
MSDEKAARLAAIRAANAAKRGGAAQPSNSVEGASAGVPPRSVRAGSVVGETPSINRNASSRPQRAPELDAFADMPPAMAFQTFLGIVLAVILGAFAAIVALPAWLPGLSASLLGAEPKAYWYLSRSSAFVAYILLWLSMVFGLLMTNKLARVWPGGPTAFDLHQHASLLGLAFALFHALILLGDRYIQATLIQVLVPFQYSGYEPLWVGLGQLGFYGLTIVGLSFYIKDRIGRKVWRLIHFLSFAIFGLALLHGIWSGSDSQSDLARAIYWTSGGSVLFLTIYRVLVARSR
>NC_009767.1|WP_157042498.1|283405_284359_-|FAD:protein-FMN-transferase
MPSIAFQSMGCQMHAFLDGNDDAATRTLRAVPRWFAEWERILSRFRSDSELSALNTRAGEGWVRASRTLWEVLNDALVAARLSDGLVTPTVLTALEATGYDRDFAQIAAGAPAQSSASLPASGDWRAIRLDPQRRTVALPPGMRLDLNGVAKGWAATRAAQRLAAHGPALVDAGGDIAVRGARAGGEPWAIGIANPFQPDVPLDVVLLTDGGVATSGRDVRRWRQGSVERHHIIDPRTGAPAETDVLAVTVIAPSLFEAEVAAKVVVILGSVAGMEWLSARPWLASLIVTDAQEVLHTATFEQFRWHEPEDMEVVYE
>NC_009767.1|WP_011997765.1|284370_284790_-|hypothetical-protein
MTRTRIPSQTFKLIISTASIAATLTGWALLAIQNPPAATATESFSQAPAVVAPPPAWLSEPPVIPTLPPLIAVAQPPESADIQPVAPAAGSAQPVAPAAPAPVVVANPPVLREVSAPLRVNPPVQAQRPAPVVVTRSSR
>NC_009767.1|WP_011997766.1|285007_285832_-|peptidase
MNQRTLLGVAAALTAFVLVIIGALVGRVTQTAVPSATDVIVAPTQAPTDAPVALDPTVEALIREREAAYRQALNEANQRITEANQRLEEANRRIEQQAAAQQAAAQQAAAQQAAAQQAAAQQAAAQQSAPTYPVSAEQAQAIAQNLAQGAYLVKPAELVLYQGAPAYEIVFDAGAVYVDAQSGTVLANTLAQPVASQPVNAEQAAQIALAYRGGGQIRKVEFERERGIDVYEVKFTDGAEVYVAASDGAVVYARLDKAKEEEKRDDDEKRSDDD

Crispr_ID: NC_009767_3

• CRISPR_ID: NC_009767_3
• CRISPR_location: 288077-288192
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_3

Consensus_repeat	Method
GACCGTCGCTGCCAATGACCTGTGACCATCCGGCATGGTCAC	CRISPRCasFinder

spacers of NC_009767_3

>3.1|288119|32|NC_009767|CRISPRCasFinder
TGTAATGGTTCGTGCACTGGCGCTTCAGCAGA

CRISPR arrays and Neighbor proteins around NC_009767_3

CRISPR arrays

The CRISPR arrays of NC_009767_3

>merge|NC_009767|3|288077-288192|CRISPRCasFinder
GACCGTCGCTGCCAATGACCTGTGACCATCCGGCATGGTCACTGTAATGGTTCGTGCACTGGCGCTTCAGCAGAGACCGTCGCTGCCAATGACCTGTGACCATCCGGCATGGTCAC

>NC_009767|3|3|288077-288192|CRISPRCasFinder
GACCGTCGCTGCCAATGACCTGTGACCATCCGGCATGGTCAC	TGTAATGGTTCGTGCACTGGCGCTTCAGCAGA
GACCGTCGCTGCCAATGACCTGTGACCATCCGGCATGGTCAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_011997766.1|285007_285832_-|peptidase	unknown	unknown	gnl|CDD|235334
NC_009767.1|WP_157042754.1|279587_281126_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173810
NC_009767.1|WP_011997775.1|293966_294332_-|metallopeptidase-family-protein	unknown	unknown	gnl|CDD|240572
NC_009767.1|WP_011997774.1|292655_293939_-|glycoside-hydrolase	unknown	unknown	gnl|CDD|119353
NC_009767.1|WP_011997773.1|291519_292656_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997763.1|282537_283413_-|hypothetical-protein	unknown	unknown	gnl|CDD|226582
NC_009767.1|WP_049768775.1|290306_291398_+|proline-racemase-family-protein	unknown	unknown	gnl|CDD|368491
NC_009767.1|WP_049768774.1|278214_279036_+|metallophosphoesterase	unknown	unknown	gnl|CDD|224327
NC_009767.1|WP_011997778.1|296384_296666_+|acylphosphatase	unknown	unknown	gnl|CDD|172920
NC_009767.1|WP_011997760.1|279032_279581_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997770.1|288728_289787_-|M42-family-metallopeptidase	unknown	unknown	gnl|CDD|349906
NC_009767.1|WP_011997777.1|295731_296388_+|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl|CDD|273990
NC_009767.1|WP_157042498.1|283405_284359_-|FAD:protein-FMN-transferase	unknown	unknown	gnl|CDD|224394
NC_009767.1|WP_041330123.1|277461_277932_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240032
NC_009767.1|WP_011997767.1|285997_286681_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009767.1|WP_011997762.1|281851_282343_-|heme-binding-domain-containing-protein	unknown	unknown	gnl|CDD|379587
NC_009767.1|WP_011997769.1|288297_288729_-|cation-channel-family-protein	unknown	unknown	gnl|CDD|366146
NC_009767.1|WP_011997765.1|284370_284790_-|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NC_009767.1|WP_011997776.1|294459_295053_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|131997
NC_009767.1|WP_011997779.1|296655_297480_-|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|274648

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_011997766.1|285007_285832_-|peptidase	gnl|CDD|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0.00130415
NC_009767.1|WP_157042754.1|279587_281126_+|S8-family-serine-peptidase	gnl|CDD|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	3.18271e-124
NC_009767.1|WP_011997775.1|293966_294332_-|metallopeptidase-family-protein	gnl|CDD|240572	cd12952, MMP_ACEL2062, Minimal MMP-like domain found in Acidothermus cellulolyticus hypothetical protein ACEL2062 and similar protein. The subfamily includes an uncharacterized protein from Acidothermus cellulolyticus (ACEL2062) and its homologs from bacteria. Although its biological role remains unclear, ACEL2062 contains a minimal metalloprotease (MMP)-like domain consisting of 3-stranded mixed 2-beta sheets and a HExxHxxGxxD/S (x could be any amino acid) motif. It may belong to a superfamily of bacterial zinc metallo-peptidases, which is characterized by a conserved HExxHxxGxxD motif.	3.23111e-47
NC_009767.1|WP_011997774.1|292655_293939_-|glycoside-hydrolase	gnl|CDD|119353	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.	1.3679e-84
NC_009767.1|WP_011997763.1|282537_283413_-|hypothetical-protein	gnl|CDD|226582	COG4097, COG4097, Predicted ferric reductase [Inorganic ion transport and metabolism].	2.83519e-07
NC_009767.1|WP_049768774.1|278214_279036_+|metallophosphoesterase	gnl|CDD|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	1.54918e-16
NC_009767.1|WP_011997778.1|296384_296666_+|acylphosphatase	gnl|CDD|172920	PRK14444, PRK14444, acylphosphatase; Provisional.	7.1744e-57
NC_009767.1|WP_049768775.1|290306_291398_+|proline-racemase-family-protein	gnl|CDD|368491	pfam05544, Pro_racemase, Proline racemase. This family consists of proline racemase (EC 5.1.1.4) proteins which catalyze the interconversion of L- and D-proline in bacteria. This family also contains several similar eukaryotic proteins including Trypanosoma cruzi PA45-A, a protein with B-cell mitogenic properties which has been characterized as a co-factor-independent proline racemase.	1.47665e-152
NC_009767.1|WP_011997770.1|288728_289787_-|M42-family-metallopeptidase	gnl|CDD|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	1.57274e-142
NC_009767.1|WP_011997777.1|295731_296388_+|phosphate-signaling-complex-protein-PhoU	gnl|CDD|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	8.0355e-51
NC_009767.1|WP_157042498.1|283405_284359_-|FAD:protein-FMN-transferase	gnl|CDD|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	1.19373e-61
NC_009767.1|WP_041330123.1|277461_277932_-|NUDIX-domain-containing-protein	gnl|CDD|240032	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	3.75974e-46
NC_009767.1|WP_011997767.1|285997_286681_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.79915e-79
NC_009767.1|WP_011997762.1|281851_282343_-|heme-binding-domain-containing-protein	gnl|CDD|379587	pfam14376, Haem_bd, Haem-binding domain. This domain contains a potential haem-binding motif, CXXCH. This family is found in association with pfam00034 and pfam03150.	3.01409e-56
NC_009767.1|WP_011997769.1|288297_288729_-|cation-channel-family-protein	gnl|CDD|366146	pfam00520, Ion_trans, Ion transport protein. This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.	7.57318e-05
NC_009767.1|WP_011997765.1|284370_284790_-|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	4.23474e-07
NC_009767.1|WP_011997776.1|294459_295053_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|131997	TIGR02952, RNA_polymerase_sigma-70_factor_ECF_subfamily, RNA polymerase sigma-70 factor, TIGR02952 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is found in a limited number of Gram-positive bacterial lineages.	8.82322e-39
NC_009767.1|WP_011997779.1|296655_297480_-|LLM-class-flavin-dependent-oxidoreductase	gnl|CDD|274648	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes one such subfamily, exemplified by Rv1855c from Mycobacterium tuberculosis. [Unknown function, Enzymes of unknown specificity].	5.10523e-51

Protein sequences

>NC_009767.1|WP_011997767.1|285997_286681_+|response-regulator-transcription-factor
MKILLIEDDQRLARLIARVLRDEHHQVDVVHDGDAGQEHALRGIYEVAIIDWMLPGRDGPSICRAVRAARLPTALLLLTARGQIEDKMVGFDSGADDYLVKPFAFEELLARVRALGRRFTLQPDDRDELRVGDLVLDLRHHTARRGARPLDLTPTEWNLLEYLMRNAGQALSRQQILDYVWSYEHDVQPQMVDVYIAYLRRKLNAPGERDPIVTVRGVGYRLEESRV
>NC_009767.1|WP_011997766.1|285007_285832_-|peptidase
MNQRTLLGVAAALTAFVLVIIGALVGRVTQTAVPSATDVIVAPTQAPTDAPVALDPTVEALIREREAAYRQALNEANQRITEANQRLEEANRRIEQQAAAQQAAAQQAAAQQAAAQQAAAQQAAAQQSAPTYPVSAEQAQAIAQNLAQGAYLVKPAELVLYQGAPAYEIVFDAGAVYVDAQSGTVLANTLAQPVASQPVNAEQAAQIALAYRGGGQIRKVEFERERGIDVYEVKFTDGAEVYVAASDGAVVYARLDKAKEEEKRDDDEKRSDDD
>NC_009767.1|WP_011997765.1|284370_284790_-|hypothetical-protein
MTRTRIPSQTFKLIISTASIAATLTGWALLAIQNPPAATATESFSQAPAVVAPPPAWLSEPPVIPTLPPLIAVAQPPESADIQPVAPAAGSAQPVAPAAPAPVVVANPPVLREVSAPLRVNPPVQAQRPAPVVVTRSSR
>NC_009767.1|WP_157042498.1|283405_284359_-|FAD:protein-FMN-transferase
MPSIAFQSMGCQMHAFLDGNDDAATRTLRAVPRWFAEWERILSRFRSDSELSALNTRAGEGWVRASRTLWEVLNDALVAARLSDGLVTPTVLTALEATGYDRDFAQIAAGAPAQSSASLPASGDWRAIRLDPQRRTVALPPGMRLDLNGVAKGWAATRAAQRLAAHGPALVDAGGDIAVRGARAGGEPWAIGIANPFQPDVPLDVVLLTDGGVATSGRDVRRWRQGSVERHHIIDPRTGAPAETDVLAVTVIAPSLFEAEVAAKVVVILGSVAGMEWLSARPWLASLIVTDAQEVLHTATFEQFRWHEPEDMEVVYE
>NC_009767.1|WP_011997763.1|282537_283413_-|hypothetical-protein
MSDEKAARLAAIRAANAAKRGGAAQPSNSVEGASAGVPPRSVRAGSVVGETPSINRNASSRPQRAPELDAFADMPPAMAFQTFLGIVLAVILGAFAAIVALPAWLPGLSASLLGAEPKAYWYLSRSSAFVAYILLWLSMVFGLLMTNKLARVWPGGPTAFDLHQHASLLGLAFALFHALILLGDRYIQATLIQVLVPFQYSGYEPLWVGLGQLGFYGLTIVGLSFYIKDRIGRKVWRLIHFLSFAIFGLALLHGIWSGSDSQSDLARAIYWTSGGSVLFLTIYRVLVARSR
>NC_009767.1|WP_011997762.1|281851_282343_-|heme-binding-domain-containing-protein
MTTSIQQRTTSLDARRIAAGVLAGMMGLVLLIQFIPYGRDHTNPPVIAEPSWDNPQTRALFFRACADCHSNETTWPWYSNIAPASWLITRDVMKGRAEFNVSEWGRPDNEGDDAAKLVQNGEMPPWFYLPLHPEANLSPVERQQLINGLLATFGGEAEREDEK
>NC_009767.1|WP_157042754.1|279587_281126_+|S8-family-serine-peptidase
MSLRILLALAIALFASASSPTDPRFDEQWALYKVGATCAWERTRGSADVIVAVVDSGVDPTHPDLAARLRSDGYDFVDNDADPRDENGHGTHVAGIIAAILDNNEGIAGLAPEVTILPVRVMNARGKGSDRAIARGIRFAADRGAKVINLSLGATLTLNADEPSALVNDAIIYAQQQGALVVVAAGNDAVPLPNAIAVDNPDVLVVAATDQRDHKAPFSNSGPWIAVSAPGVNILSTMPTYEVFLTSDQVPRDERFRRDYDYMSGTSQATPYVAALAALLFSANPDWSAAQVAETIRTNATDIRDLNPRFELGTGRIDACKSFGGPPAEQAPQPAPRPSAPRSESLLGLLALCVCGIVLALAFAAIALIGAGRRRSPRPAPAPVPVPVYAPPTPSSPPQPYQATPPVSTAQSAPTGAWGTLAVIAGAAQPRTYALSGAELVIGRSEECQIVLIGDGSVSRRHAIIRNNGRQVTVEDAGSSHGTYLNGARIIQPTPVRRGDVLQVGQTQLRFG
>NC_009767.1|WP_011997760.1|279032_279581_+|hypothetical-protein
MTQEQTSQQQKVDTGPLPPLPPLPEPPPSPRQASRRTMLVAGIAVLAVAGIALWWFTRPSDPMSDPRPVQTVQNFVAATEARDVSRMLSYVEPTDLKRQISPELRSYMEYITDLQFKNETYTLVDNNGSIARVRLTGTVRYTVDYGSVYSGERSFDTIFELVLLEGTWYLRSLQLPELEQQQ
>NC_009767.1|WP_049768774.1|278214_279036_+|metallophosphoesterase
MHISDLHAGRTFHPHVADQLTREARDLRPDLLIISGDLVQRADFVAQWKAITQYLQQLPEPRLIVPGNHDVPLFHLVERFFRPLDRYRRFISTDLNPVFERPGIVVVGGNSAHGLTIDGGYVSPEQQRTMAQLFVRYPDDVCKIAVLHHGVVRPPGCEKRSIVRNATDVTRMLEQSGVDVLLCGHHHVSYVGVAGSAKRFVVCQSGTSTSRRVRAGERGRNAYSVLTIEDATIHISQRRYVEMSGRFEPLGEYAFQRRGIWLPLHRRDTPQTL
>NC_009767.1|WP_041330123.1|277461_277932_-|NUDIX-domain-containing-protein
MTINYTAWLRSYVGHQRLLQLAASAFIRNDRGHVLLGQRSDVMLWAPPSGVVQLGETPARTLVREVLEETGLHVVVERLIGLYTGREFEWTYPNGDQAQIVSAFFACRVTGGMLQPDHTEFVSLAYYPPDRLPPLMPRYVRMVRDAFAGRAEAAFD
>NC_009767.1|WP_011997769.1|288297_288729_-|cation-channel-family-protein
MNRAQSRIWELVEVSYDSDSHSPVLDWYDTGMMALILLNVLAVVIASVEEIGGRFAGFFSAFEVFSVAAFTVKYIVKLWACTADARYAHPVLGRVKYALTPMVIIDPLAFLPFYLWFFAIDLRFLRALRLFRLLRVLKLGRYQ
>NC_009767.1|WP_011997770.1|288728_289787_-|M42-family-metallopeptidase
MNNHSLAFLKQLLATPGPSGEEVAAGRVWRREAETFADRVYADVRGSSYAVLEGGAPRVLLAGHIDEIGVMVSYIDDDGFLWFSPIGGWDPQVLVGQRVRLLGRAGDVIGVIGKKPIHQMKSEEREKASKIEDLWIDIGAANRAEAEALVRVGAAGVIDAPIYDLPGGKVVSRSIDDRIGAFTVLEALRLLARDRPRATVAAVATSQEEITFAGARTAAFSFEPQVAIAVDVTFATDHPNADRKQYGNVRLGGGPVLSRGSANSPVVYDMLVAVAEREGIPYSVQINPRYTGTDADAIHIARGGVATGVVSIPNRYMHSPNEMIALSDVEHAARLIAAFVRSLGPETDFIPR
>NC_009767.1|WP_049768775.1|290306_291398_+|proline-racemase-family-protein
MGARTWQTRRRQSVRLKNLITAVDLHACGEPGRVIIGGVLDVPGRTMFEKMKFFEEHLDDIRLRLLREPRGYPALCANVILPPAHPDAQAGFIIMEQAEYPPMSGTNTICVATTLLETGMLPMTEPVTEFILEAPAGLIGVKAECRDGKVTRVTFRNVPAFAVHLDVSIEVPRVGTVKVDVAWGGMFYVIADASQFGLRLTPDEGRDITRISEMIRAATREQYPVVHPDNPAIVGPTISQISGPPSHPQAHYKNVVTLSTGTFDWNNPSTWTGVIDRSPCGTGTSAKMATLYARGRLGLHTDFHHEGILGTLFTGRLIEETQVGPYKAVVSTISGAAWITAISQFVLDPSDPYPNGFTVGDIW
>NC_009767.1|WP_011997773.1|291519_292656_-|hypothetical-protein
MIKSEIKANEREAAQLFVRGVAAARGGQRRLAAVLLSRVVQLDPQHEMGWLWLSGVLDDPKDIAFCLRSALAINPHNERARRGLEWLNSRQLLRDDDTAITASFARVAPAAPTDSPTDGVVQETPISWRSRIASAFRRLAPRSSPSSDHAESWWVGWRHSRQEMGRARALLWIMPVLLLLLTLALNYALRTAVERNEALVAAELARRVSAAETQAQSVDDAAARVLVVPAILEPELAAEREAATLAYLSRLEEPRARLRGAIESYRNATSRPGGSSIVHATSAQRLRDEIEQAYAVIAALEPPQTLAEAHVLYLQGLELELTALDHMLAFYSGFRAEDANRAALTMAEAARRLDQARQALDRQRAELSVERPLPHAIR
>NC_009767.1|WP_011997774.1|292655_293939_-|glycoside-hydrolase
MRHVFSSPLAASLYAVALIVWALLVVDTVSLARRATEPPIFPTPTTVAVVTPVAATRVAAPTSMPPVQATVVPLMTPELDAEDGWFHPKTGRYIAAWLPNSFGSENRESFEANADILDEISPFWYSPSPGGELRFGREARDRTLLELAHGKNVLVIPTVHNVVTGEDPVPGILRNPRLRSYHVQQIVDEVLTYGYDGIDIDYEFLSSSLRDDYSAFILELADALHAHGKLLTVAVHAKDCDYCGLGGFQDWAVIGQVVDRLRIMTYDYHWRGGGPGPVAPVYWVERVARYAVTVVDPAKVVIGVPFYGYNWSRDGSGNARGQTWAMINEIIQTYRLSVNLMESNQNGLVQENWITYSSRTEGRREVWFATSSGLDAKLRLVQELDLAGIAIWRLGGEDPRNWEIIRARLLQDPYESQRVLSRLLPEH
>NC_009767.1|WP_011997775.1|293966_294332_-|metallopeptidase-family-protein
MDRETFESIVIEALDSLPPEFAGYLHNVEVRIEMRPTREQRRALGLRPWQTIYGLYEGVPLTERAGGEPLLPDVITIFQAPLVRDFPSRDALREEVRRTVLHEIAHFFGISDERLHELDAY
>NC_009767.1|WP_011997776.1|294459_295053_-|sigma-70-family-RNA-polymerase-sigma-factor
MVYPSPPTDSRNESEAQIIARAKAGDADAISMLYERYAPQVRRYIVSRLGDPVLAEDVCSDVFVKMLEGLDRYEDRGWPFSAWLYRIAYARTMDMLRQARRRPSVPLDESAPHALEPPDEAVISRIAYHELRSVMRVLTRDQRLVLRLRFDEDRTLAEIAESLGRTVGSVKALQHRGLTRLAEALADHPAHQPVSVF
>NC_009767.1|WP_011997777.1|295731_296388_+|phosphate-signaling-complex-protein-PhoU
MRDHYIKQLQAVHDDLLRMGSRVEHQLADAIKALDRLDIVLAREVVARDREIDAARNAIDERVFELIAMQQPVATDLRSLLAAVAIAGELERAADYAKGIAKKVERSLHTPAIIEAPIELHRLGTLVQNMLHTCLDAFVQLDVALARSLGERDHEIDALEDRVVEMLKDIACRDPNKLDCALLLIDTAHVLERLADRTTNIAERVIFIATAKAEEINP
>NC_009767.1|WP_011997778.1|296384_296666_+|acylphosphatase
MIDMARAHVFISGRVQGVNFRASARTYAREIGVSGWVRNLEDGRVEAVFEGARPAVQRMVSWCYSGPAHARVDAVDVHWEKPTGEEREFSIIW
>NC_009767.1|WP_011997779.1|296655_297480_-|LLM-class-flavin-dependent-oxidoreductase
MTLPVGFCLGTFGVSYAELRAAACLLDDLRFDSVWLWDHYVSWNDPRESVIEGLTALAALAEATQRIRLGPLVANNLNRHPGRLAKIAATLQEIAQGRFELGIGGGGWRPEQEAFGIDQGTVDERTERVAEAVQVIRLLWSGEPVTFHGRYYRLTNATVAPPPQPPPPIIVGARGVRLCRIAGRFADGLNVQWRDYGRLNEQLAALDEGLSESGRTRAGFDLSIHADWRDLHPDPVAALDRWQALGFTRTIVYVAAPFPDDDFRRLAQTLHLTR

Crispr_ID: NC_009767_4

• CRISPR_ID: NC_009767_4
• CRISPR_location: 338176-338286
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_4

Consensus_repeat	Method
CCAGCATGAGGCGTTGATCGGTAATCATCACTGCGGC	CRISPRCasFinder

spacers of NC_009767_4

>4.1|338213|37|NC_009767|CRISPRCasFinder
TTGGGAAGTCGTGCAGTGGCCGCGAACGGTCGCTCAG

CRISPR arrays and Neighbor proteins around NC_009767_4

CRISPR arrays

The CRISPR arrays of NC_009767_4

>merge|NC_009767|4|338176-338286|CRISPRCasFinder
CCAGCATGAGGCGTTGATCGGTAATCATCACTGCGGCTTGGGAAGTCGTGCAGTGGCCGCGAACGGTCGCTCAGCCAGCATGAGGCGTTGATCGGTAATCATCACTGCGGC

>NC_009767|4|4|338176-338286|CRISPRCasFinder
CCAGCATGAGGCGTTGATCGGTAATCATCACTGCGGC	TTGGGAAGTCGTGCAGTGGCCGCGAACGGTCGCTCAG
CCAGCATGAGGCGTTGATCGGTAATCATCACTGCGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_011997800.1|324617_326192_-|phosphoglycerate-dehydrogenase	unknown	unknown	gnl|CDD|237436
NC_009767.1|WP_157042757.1|348143_349088_+|RluA-family-pseudouridine-synthase	unknown	unknown	gnl|CDD|223638
NC_009767.1|WP_011997816.1|345632_346259_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997804.1|333642_334476_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NC_009767.1|WP_011997806.1|336393_337017_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NC_009767.1|WP_011997801.1|326967_329346_-|regulator-of-chromosome-condensation-RCC1	unknown	unknown	gnl|CDD|227511
NC_009767.1|WP_011997811.1|340471_341791_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NC_009767.1|WP_011997818.1|347332_347908_+|signal-peptidase-II	unknown	unknown	gnl|CDD|173251
NC_009767.1|WP_011997815.1|345121_345454_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NC_009767.1|WP_011997803.1|332391_333636_-|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|182528
NC_009767.1|WP_011997809.1|338404_339958_-|aldehyde-dehydrogenase	unknown	unknown	gnl|CDD|365919
NC_009767.1|WP_011997805.1|334541_336305_-|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NC_009767.1|WP_011997807.1|337613_337820_-|DUF2283-domain-containing-protein	unknown	unknown	gnl|CDD|378367
NC_009767.1|WP_011997802.1|330057_332067_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|366166
NC_009767.1|WP_011997812.1|342151_342592_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997813.1|342588_344184_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997817.1|346409_346775_+|conjugal-transfer-protein-TraR	unknown	unknown	gnl|CDD|274340
NC_009767.1|WP_011997808.1|337816_338101_-|DUF4258-domain-containing-protein	unknown	unknown	gnl|CDD|379454
NC_009767.1|WP_011997814.1|344711_345023_-|hypothetical-protein	unknown	unknown	gnl|CDD|370140
NC_009767.1|WP_011997799.1|322194_323031_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_011997800.1|324617_326192_-|phosphoglycerate-dehydrogenase	gnl|CDD|237436	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional.	0
NC_009767.1|WP_157042757.1|348143_349088_+|RluA-family-pseudouridine-synthase	gnl|CDD|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	3.13738e-108
NC_009767.1|WP_011997804.1|333642_334476_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	8.01316e-121
NC_009767.1|WP_011997806.1|336393_337017_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.08693e-15
NC_009767.1|WP_011997801.1|326967_329346_-|regulator-of-chromosome-condensation-RCC1	gnl|CDD|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	5.62673e-44
NC_009767.1|WP_011997811.1|340471_341791_+|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.40101e-47
NC_009767.1|WP_011997818.1|347332_347908_+|signal-peptidase-II	gnl|CDD|173251	PRK14790, PRK14790, lipoprotein signal peptidase; Provisional.	5.3864e-99
NC_009767.1|WP_011997815.1|345121_345454_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	8.46256e-10
NC_009767.1|WP_011997809.1|338404_339958_-|aldehyde-dehydrogenase	gnl|CDD|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	0
NC_009767.1|WP_011997805.1|334541_336305_-|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.46637e-34
NC_009767.1|WP_011997807.1|337613_337820_-|DUF2283-domain-containing-protein	gnl|CDD|378367	pfam10049, DUF2283, Protein of unknown function (DUF2283). Members of this family of hypothetical bacterial proteins have no known function.	8.42314e-13
NC_009767.1|WP_011997802.1|330057_332067_+|alpha/beta-fold-hydrolase	gnl|CDD|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	5.27438e-12
NC_009767.1|WP_011997817.1|346409_346775_+|conjugal-transfer-protein-TraR	gnl|CDD|274340	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family. Members of this predicted regulatory protein are found only in endospore-forming members of the Firmicutes group of bacteria, and in nearly every such species; Clostridium perfringens seems to be an exception. The member from Bacillus subtilis, the model system for the study of the sporulation program, has been designated both yteA and yzwB. Some (but not all) members of this family show a strong sequence match to Pfam family pfam01258 the C4-type zinc finger protein, DksA/TraR family, but only one of the four key Cys residues is conserved. All members of this protein family share an additional C-terminal domain. Smaller proteins from the proteobacteria with just the N-terminal domain, including DksA and DksA2 are RNA polymerase-binding regulatory proteins even if the Zn-binding site is not conserved. [Unknown function, General].	2.09269e-26
NC_009767.1|WP_011997808.1|337816_338101_-|DUF4258-domain-containing-protein	gnl|CDD|379454	pfam14076, DUF4258, Domain of unknown function (DUF4258). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 95 and 124 amino acids in length.	1.46823e-08
NC_009767.1|WP_011997814.1|344711_345023_-|hypothetical-protein	gnl|CDD|370140	pfam08822, DUF1804, Protein of unknown function (DUF1804). This family of bacterial protein is uncharacterized.	0.000238063
NC_009767.1|WP_011997803.1|332391_333636_-|FtsX-like-permease-family-protein	gnl|CDD|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	7.05083e-58

Protein sequences

>NC_009767.1|WP_011997808.1|337816_338101_-|DUF4258-domain-containing-protein
MTNAQPIAHYRISEHARNEMSRRQISESEITSVLAAPEQVEIVREGRAVYQSRFQIGDPPKLYLVRVFVDVDVIPPVVVTVYRTSKVAKYWGKE
>NC_009767.1|WP_011997807.1|337613_337820_-|DUF2283-domain-containing-protein
MKVIYDRETDTLTVIFADTLVAESDEDKPGVILDYDMAGNLVSIEILDASRRVASPERIEYQVTLPTL
>NC_009767.1|WP_011997806.1|336393_337017_-|TetR/AcrR-family-transcriptional-regulator
MQDILNEPAYGPTAARILMTATRLFMQRGYSAVSISDIVQAADVTKPTLYYHFSDKEELFVLVAIHMLAEMYATMRRAIANQPDTRARLVALAQVLLHEPNSDTRMMRHQAREHLNPERQRRLAEAFKRYMVDPLREVMQQGIDSGELRGRSADDLTMLFLGLMEGFQRQTAPPVEPERSDIYQSISTDHFSAETLVDLFLYGTAAR
>NC_009767.1|WP_011997805.1|334541_336305_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MTSVPQAKPGVRFPRPSLPVIIAAVLIVAVVATLVVPRLAGSGADPLRGGTPVTITRETLIAGISATGRIEPRQEAALGFTLPGRVADILVAEGDLVQAGAPLIRLDSREAEAQIASARAALAQAEADLRQLQEGATPEEIAQAQAQVESARGALAQTAGSVTNADIAAARARVEEARARLSALQGAPNNDELTAARAALTEAQAALDRQRSALATAKIDAERQVFERANRLRDAQTAFAAARDNLARVEADGKDPLTGAPLTDAGKRAYADAFAQAERAMQDAERALNQARIAHETARQNEITGLAEAEARVATAQANLDALLTPNPDRIAAARAALAQAEADLARLLGEQRQGALAAQQANLAAAEANLARLTADPRATDLARAQARVAQAQAQLDLAQIRLDDTTLKAPFTGVVARITVAPGEQAGQNPVLTLIDVSRFNVTVTVDEVDVARVAPGQEVEVLIDALGPPPLTGVVQRIAPQATNERNVTAYEVELEVTPGERPVRSGMTASATIITAKRENAISVPVQAIREENGVTVVDVIVTNNGRTTLVAQPVEVGIRAGDRVEIVSGLQEGQQVLLPGAR
>NC_009767.1|WP_011997804.1|333642_334476_-|ABC-transporter-ATP-binding-protein
MHPETEYITPVGAIDFVTEPVVRIEHVTKEFITGGNRFRALDDVSLDIHRGEMVAIMGPSGSGKSTLMTILGLLDVPTSGSYWLDGQDVSKLDRVQQARVRNQKLGFVFQNFNLLPRLTALKNVELPLVYGRVGAREREERARQALEAVGLGAKMNNRPNELSGGQKQRVAIARALVSNPAMVLADEPTGALDTRTGAEIMALFRQLNREQGITIVIVTHDPEIGKQMDRVIGLRDGRISENILQEYYHVVPAAEELELPMREKEPVAVPVIRTEQE
>NC_009767.1|WP_011997803.1|332391_333636_-|FtsX-like-permease-family-protein
MFKELALMAVDSLRANMFRSLLTMLGIIIGSATLVAVLSLGNALQSQVFERFVDLGTRRIAVLPGDPQARGARDIPGYGLLSIQDYRALEQLVARHPDVFRTIVPEVSLRVQARFGSSAANPTVVGTTKDYQLVQTVPVQYGRFLTDDDDRQAARVAVLGALIAEDLFGKENVKDAIGKTIEVNGQPLQVVGILRQLGGPFSSDQRILTPVSTARLRIAGSQDLPGRGLQMSSILISLQSEQMVARGEALVTATLRATRNVPDGAIDDFRLNLPTQALNVLAGINGAITGFIALVAGISLVVGGIGIMNIMLVAVTERTREIGVRKALGATDSDVLSQFVLEAVAISVAGSLIGVTGAIGLVTLVGAAAGLSVSISWVAVFLALTFACAIGVGFGYYPARRAALLLPIEALRYE
>NC_009767.1|WP_011997802.1|330057_332067_+|alpha/beta-fold-hydrolase
MHLRFALLIIALFLSACAVPSASNPTPTLAPGAEALLGAPTTTPVPAPTAAPGSTVAPTATAVRTVARYETANCEFPPPGGVSVECGWLTVPEDRAKPDNGREVRLHVAIFRSTRPDPPPDPIVYLEGGPGVDALERLPLVFDLWFRPFLANRDFILYDPRGAGYSTPSLACPELTKLSFDMLPMDVRAAESSRLWGEAALKCRERLVAEGIDLAQYNTLTGAADLEDLRLALGYEQWNLIGSSYGTRLALTAMREYPQGIRSVVLDSTRPPQINESQTPADAERAFQTLFRGCAADPDCNAAYPDLERVFYDLVEKLNTQPVTLPGVDPFTGRTYEVLINGDTLISTLFQAMYSTEIIPLLPRAIYGAAQKNEFSLWVRLIMNNVSQSDYFSYGVMYSSRCYDEILFETREAMAKADEPFPHQQDVFDMTAFWDICNAWGVGVAPPIENQPVRSAIPALILAGTYDPATPPDDGKEAVATLRNGFFFEFPSSGHGVLLDGGCPLSMALAFLDNPQRQPDAACLAQLGGPAFDVEGAAVRMIPFRDSDAGIAGVTPQGWTNFGQGVYGRPSGDVAIVQMRTPLSALEMLARLDQQFDLDSKPESAGEYRSERYAWQLYTATIRGQPTDIALTEDGGRALLVLMISDPGNRDEMYEQVFLPVLDALRVIS
>NC_009767.1|WP_011997801.1|326967_329346_-|regulator-of-chromosome-condensation-RCC1
MNHRTILRWLLVVSVVGGILWSAQTGHTAPTPTTTEPPSTTTEPPSTTTEPPSTATRLHTSSFSPLQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTSGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLVSGVTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDGRLLYRTTPVDVVVVTLPKVYLPLVIKG
>NC_009767.1|WP_011997800.1|324617_326192_-|phosphoglycerate-dehydrogenase
MDRILVAEPIAEEGLARLRAAARVDVRTDLDKAGLIAILPEYDALIVRSATKVTADVLAAGTRLRVVGRAGTGVDNIDLDAATRQGIMVVNAPASNSVAVAELTIGLILSLARHIPQAHSTVVAGKWERNRFMGFEVRNKTLGLVGLGRIGAEVARRARGLEMHVVAYDPVVSTERALQLGVTLAPLEEVLAQADIVSLHVPLIDSTRNLINAMRLAQMKRGAYLINAARGGVVDETALLEAINGGHLAGAALDTYSTEPPVGNPLVGHPRVITLPHLGASTVEAQALTGVDVAEGVLVALSGGSPHYAVNAPYIPPEHRGLVAPYVDLGRRLGMLCAGLVHDPVHNFEIEYRGELATVDTTPVRLAVLQGLLAGTREERVTPVNAPILARELGLKLTEFSTEDAGNFSGLLVLRAQTSDGAREFAGTILRGEPHVVEADGFWVTFVPAGPMLFTYHRDRPGMIGKVGTLLGEADVNIASMDVGRLAPREQAMMVLRLDDPVPPHVIARLREEPDIQHATTLII
>NC_009767.1|WP_011997799.1|322194_323031_+|hypothetical-protein
MTPAELLSFLGLAWSRLLLFPGGICLIIAVWLAEAFAQRPTSQGLRSFPTAWLSAPLPASAVALPWLGVALLPLPGAVALSRPIDLATVIALLEWPRLLAISTDLQYGNRARGVQRLAAALNGYPPLILALVLLSLGTGTLEVAGLLRIPDGATPLWQAVWFWLGAGALILALPPLIEIGPFALDAPDELRPGLRLRMLGIILIAALPGVALLTRDGADEWWRTALPPLTLGGALWIVHRSARLQSALRWARIYLGYDLLLALALLAAGLLALQARLA
>NC_009767.1|WP_011997809.1|338404_339958_-|aldehyde-dehydrogenase
MDDHITDDLPCYGLYINGSWVDAEGGLMPVNEPARGRTMAYVARGSAADVDRAVAAAREAFDRGPWPHTPGHERARILNAIADLIEEHTAEFAELESRNLGAPLRKTTFVDIPWSVEHLRVFAELATIHPYEALPWTDIPSVSWNFVWREPIGVCGQIVPWNYPLLMTIWKIAPALAAGNTVVLKPASYTPLTALMLMRLIHEAGLLPRGVLNIVTGPGAEVGDALARHPGVDKVSFTGSTETGRHIMRLASDTIKRLTLELGGKSPSLVMPDADLELATDGVLFGVFFNGGQSCEAGTRCLVPESLHDEFLERLVTRARSLRIGDPLDLETDLGPLVSEAQCRIVEEYIDVGKHEGARLVTGGKRARIPGFEYGPFIEPTIFTGVQNGTRLAQEEIFGPVLSVIPYRTVTEAIELANASRYGLGAAVWSRDLQGAIEVAKRIRTGTVWINDHHIILPRAPFGGYKQSGIGREHGIYGLMAYTELKHIHVDLMQKRSGRVWWDVLIPQRDQSEEAGL
>NC_009767.1|WP_011997811.1|340471_341791_+|extracellular-solute-binding-protein
MQWPVLVRRGWLVVLSSLLLVSCGLLEPPPPTPTPEPRVLRVYTVRDPAIEGVVEIVSQEFRRRHPDVQIELIDGSGDYSELRGSAAAGNVPDVVWLIDMLTESLLESDLIIDLEEFARGDDSVNLADVHPMALELGRSRKRPGLFMIPVSLETIQMYYNRSLWEQSGAPLPRDDWTWDDLIAACKRLQGAAPGVDCLSFTNASLNGYAWWVYWLPWVRGAGGDALSADGTQSTLSSPQSLTGLQAYVDLWLTHKIAAPPASGGRDCFVDQTCAAFFSFAGVAQRYRDQIGDRFAWDVQLVPSHPAGRFTGIGTYGFAVTRASRDPQLAWDFVKIFIAPETQRALTAAHLGTPVLLSLSNDPTMMQLPAPPANMRAFVIGREAGIAPPRYPTACGSVYTGPVASALDDALNAAVRGLASVEGAFAVADRKIQTCLDANR
>NC_009767.1|WP_011997812.1|342151_342592_+|hypothetical-protein
MSTIAQTRFSNATLLRAGGAAALAAVAANVVARLILGAVMPLPPDFMPLTFGPIIAFTLFFTLIGIGVLAVVNRVAANPLRTYNIIGVIAFFVSLAPNLAGAANPSAMPMGGTGTDYLILIVFHVVAAAVFLGVLNLLVRRMQPHR
>NC_009767.1|WP_011997813.1|342588_344184_+|hypothetical-protein
MIRRLIILALASLGASSLYLPGFTNALLADDWAVIQRNLDLSLRDLPHLLTATHGGWYRPVFDLFIAACARIFGFEAMGYHVVALVLYVAVTTLVADIISTMTQRIDIGMLAAILFSVHGAHAEPILWVSASNELLAGLFVLLSLRIYLAFRTAPAPGRYYALTVVCYVLAIGAKETAIFLPVALAVYDLLDANAETWRERLRRLTPVAPLLAIQGLFVAFRLSTGSPYPVEIDPVRIAINLGYYLAVGLFALPDNYGYLTSLPLWRDQPVLPFVAVTGATGALGMLGWLGWQARQRIPRHQARILLFAAAWSAIALHPVLLTATGRTAFMATIGIAWMIAVGWSAVWQVAEERRALCVTALILLIGTHAGVASYRAYWWRQAGREMERALAWMDSTLTDVPSGAIVCVTGLPDHLHHAYVFRNAFPTLNRVRFPDHMVHAFLDADRHLAQTAEVCKSAYIIHYIDAPLPAAARSARFCYALDYVIPMTIDDAACWSCRAQRRVMPRAATGHAARSEESARVAQDPSRGSG
>NC_009767.1|WP_011997814.1|344711_345023_-|hypothetical-protein
MPRRLSLPCDRLCAMYEAGATTITLARLYDCHPATIARYLRQCGVTLRTGRFTARPFDEALFRRLYLEEQLPLTRIAIALNVSVSTLGNWRRRLGIPPRRRRA
>NC_009767.1|WP_011997815.1|345121_345454_-|helix-turn-helix-transcriptional-regulator
MSTEQNRRRRRATYVWKPEMIRALREHMDLTQRELADLLEVRQQTISEWETGLHTPHRSTQKTLSMVAERAGFPYLPQTAETPADGDGAQHNGEAPAERVDAGGAGANSD
>NC_009767.1|WP_011997816.1|345632_346259_+|hypothetical-protein
MALISYEELATGLEEAWLIAGLHEHAVIESIQPETLDRTYRAELFPEHPEPIGEGWSPPWVELNLVWTAAHQLYSEGRDIAPGPLELAWTYTVDIRSVDRSDAELIRAFNGAVRAALRRVAPDFPPPADYIAVEIRRGYRIDEKPSPVYVQIIGTNVTDLSDLWGQRSSEALRDVLRSELLIVATLLHSLGETFTPGGIGGYRSVDTA
>NC_009767.1|WP_011997817.1|346409_346775_+|conjugal-transfer-protein-TraR
MPSTTIFAAQRERLEAERDALLAEIAALERERASREESAGIGNVVAEEMMETLVRERDLALRSNARDLLEQVNAALRRIDEGTYGICADCGEPIPLERLEALPYATLCVRCQAARERARRW
>NC_009767.1|WP_011997818.1|347332_347908_+|signal-peptidase-II
MTNSRTTLRHELQRYWLRPAVIAATILAFDQATKAWVLNTLGTVEGTSRPLIGDWLSLTLIHNTGIAFGMFDAGFSHVFTATSLIISLGAMYFYRYHLPGPHLISQVCLGLIVGGAIGNIIDRLRFGYVIDFVHVHWFPGIFNVADSAITVGVAVLALFLLLTGDGDQRRAGSDDALLNDLLNQDPRRPGP
>NC_009767.1|WP_157042757.1|348143_349088_+|RluA-family-pseudouridine-synthase
MHGELLQLIVEAADEGHRLDRYIAGKVPDLSRTYARHLIEDARVLLNNRQVRPASPVRVGDVVTVQLPEPQPVGLVAEALPLQIVYEDDDVVVIDKPAGIVVHPAPGHNRGTLVNALIARYPEMAISGDLRPGIVHRLDRDTSGLLVAARNDRALHSLQAQQQARRMLKIYLVVVEGRMNESGGVIDAPIARHPTDRVRMAVMAGGRPARTHWRVLEELGEYALIEARLETGRTHQIRVHFASRNRPVLADPLYGPKRPRATFGLTRQFLHAHRLGFALPSSGAWVEFTSPLPDDLAAALARLRQRANSAIRRT

Crispr_ID: NC_009767_5

• CRISPR_ID: NC_009767_5
• CRISPR_location: 344336-344447
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_5

Consensus_repeat	Method
GCGCTCATCGTCGGCAACATATTCGAGCCAATGGGAG	CRISPRCasFinder

spacers of NC_009767_5

>5.1|344373|38|NC_009767|CRISPRCasFinder
TTTGCCGCTTCTCTCATCTGTGCGCAGGTGAGCTCTGC

CRISPR arrays and Neighbor proteins around NC_009767_5

CRISPR arrays

The CRISPR arrays of NC_009767_5

>merge|NC_009767|5|344336-344447|CRISPRCasFinder
GCGCTCATCGTCGGCAACATATTCGAGCCAATGGGAGTTTGCCGCTTCTCTCATCTGTGCGCAGGTGAGCTCTGCGCGCTCATCGCCGGCAACATATTCGAGCCAATGGGAG

>NC_009767|5|5|344336-344447|CRISPRCasFinder
GCGCTCATCGTCGGCAACATATTCGAGCCAATGGGAG	TTTGCCGCTTCTCTCATCTGTGCGCAGGTGAGCTCTGC
GCGCTCATCGCCGGCAACATATTCGAGCCAATGGGAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_011997811.1|340471_341791_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NC_009767.1|WP_157042757.1|348143_349088_+|RluA-family-pseudouridine-synthase	unknown	unknown	gnl|CDD|223638
NC_009767.1|WP_011997816.1|345632_346259_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997803.1|332391_333636_-|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|182528
NC_009767.1|WP_011997806.1|336393_337017_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NC_009767.1|WP_011997823.1|354091_354769_-|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|319787
NC_009767.1|WP_011997818.1|347332_347908_+|signal-peptidase-II	unknown	unknown	gnl|CDD|173251
NC_009767.1|WP_011997815.1|345121_345454_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NC_009767.1|WP_011997809.1|338404_339958_-|aldehyde-dehydrogenase	unknown	unknown	gnl|CDD|365919
NC_009767.1|WP_011997805.1|334541_336305_-|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NC_009767.1|WP_011997807.1|337613_337820_-|DUF2283-domain-containing-protein	unknown	unknown	gnl|CDD|378367
NC_009767.1|WP_011997822.1|352752_353661_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl|CDD|234708
NC_009767.1|WP_011997812.1|342151_342592_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997813.1|342588_344184_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997820.1|349704_350634_+|malate-dehydrogenase	unknown	unknown	gnl|CDD|180477
NC_009767.1|WP_011997817.1|346409_346775_+|conjugal-transfer-protein-TraR	unknown	unknown	gnl|CDD|274340
NC_009767.1|WP_011997808.1|337816_338101_-|DUF4258-domain-containing-protein	unknown	unknown	gnl|CDD|379454
NC_009767.1|WP_011997821.1|350980_352756_+|GAF-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_009767.1|WP_011997814.1|344711_345023_-|hypothetical-protein	unknown	unknown	gnl|CDD|370140
NC_009767.1|WP_011997804.1|333642_334476_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_011997811.1|340471_341791_+|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.40101e-47
NC_009767.1|WP_157042757.1|348143_349088_+|RluA-family-pseudouridine-synthase	gnl|CDD|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	3.13738e-108
NC_009767.1|WP_011997804.1|333642_334476_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	8.01316e-121
NC_009767.1|WP_011997806.1|336393_337017_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.08693e-15
NC_009767.1|WP_011997818.1|347332_347908_+|signal-peptidase-II	gnl|CDD|173251	PRK14790, PRK14790, lipoprotein signal peptidase; Provisional.	5.3864e-99
NC_009767.1|WP_011997815.1|345121_345454_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	8.46256e-10
NC_009767.1|WP_011997809.1|338404_339958_-|aldehyde-dehydrogenase	gnl|CDD|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	0
NC_009767.1|WP_011997805.1|334541_336305_-|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.46637e-34
NC_009767.1|WP_011997807.1|337613_337820_-|DUF2283-domain-containing-protein	gnl|CDD|378367	pfam10049, DUF2283, Protein of unknown function (DUF2283). Members of this family of hypothetical bacterial proteins have no known function.	8.42314e-13
NC_009767.1|WP_011997822.1|352752_353661_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl|CDD|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.66098e-104
NC_009767.1|WP_011997823.1|354091_354769_-|HAD-IA-family-hydrolase	gnl|CDD|319787	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase. L-2-Haloacid dehalogenase catalyzes the hydrolytic dehalogenation of L-2-haloacids to produce the corresponding D-2-hydroxyacids with an inversion of the C2-configuration. 2-haloacid dehalogenases are of interest for their potential to degrade recalcitrant halogenated environmental pollutants and their use in the synthesis of industrial chemicals. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.03609e-47
NC_009767.1|WP_011997820.1|349704_350634_+|malate-dehydrogenase	gnl|CDD|180477	PRK06223, PRK06223, malate dehydrogenase; Reviewed.	0
NC_009767.1|WP_011997817.1|346409_346775_+|conjugal-transfer-protein-TraR	gnl|CDD|274340	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family. Members of this predicted regulatory protein are found only in endospore-forming members of the Firmicutes group of bacteria, and in nearly every such species; Clostridium perfringens seems to be an exception. The member from Bacillus subtilis, the model system for the study of the sporulation program, has been designated both yteA and yzwB. Some (but not all) members of this family show a strong sequence match to Pfam family pfam01258 the C4-type zinc finger protein, DksA/TraR family, but only one of the four key Cys residues is conserved. All members of this protein family share an additional C-terminal domain. Smaller proteins from the proteobacteria with just the N-terminal domain, including DksA and DksA2 are RNA polymerase-binding regulatory proteins even if the Zn-binding site is not conserved. [Unknown function, General].	2.09269e-26
NC_009767.1|WP_011997808.1|337816_338101_-|DUF4258-domain-containing-protein	gnl|CDD|379454	pfam14076, DUF4258, Domain of unknown function (DUF4258). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 95 and 124 amino acids in length.	1.46823e-08
NC_009767.1|WP_011997821.1|350980_352756_+|GAF-domain-containing-sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.02761e-48
NC_009767.1|WP_011997814.1|344711_345023_-|hypothetical-protein	gnl|CDD|370140	pfam08822, DUF1804, Protein of unknown function (DUF1804). This family of bacterial protein is uncharacterized.	0.000238063
NC_009767.1|WP_011997803.1|332391_333636_-|FtsX-like-permease-family-protein	gnl|CDD|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	7.05083e-58

Protein sequences

>NC_009767.1|WP_011997813.1|342588_344184_+|hypothetical-protein
MIRRLIILALASLGASSLYLPGFTNALLADDWAVIQRNLDLSLRDLPHLLTATHGGWYRPVFDLFIAACARIFGFEAMGYHVVALVLYVAVTTLVADIISTMTQRIDIGMLAAILFSVHGAHAEPILWVSASNELLAGLFVLLSLRIYLAFRTAPAPGRYYALTVVCYVLAIGAKETAIFLPVALAVYDLLDANAETWRERLRRLTPVAPLLAIQGLFVAFRLSTGSPYPVEIDPVRIAINLGYYLAVGLFALPDNYGYLTSLPLWRDQPVLPFVAVTGATGALGMLGWLGWQARQRIPRHQARILLFAAAWSAIALHPVLLTATGRTAFMATIGIAWMIAVGWSAVWQVAEERRALCVTALILLIGTHAGVASYRAYWWRQAGREMERALAWMDSTLTDVPSGAIVCVTGLPDHLHHAYVFRNAFPTLNRVRFPDHMVHAFLDADRHLAQTAEVCKSAYIIHYIDAPLPAAARSARFCYALDYVIPMTIDDAACWSCRAQRRVMPRAATGHAARSEESARVAQDPSRGSG
>NC_009767.1|WP_011997812.1|342151_342592_+|hypothetical-protein
MSTIAQTRFSNATLLRAGGAAALAAVAANVVARLILGAVMPLPPDFMPLTFGPIIAFTLFFTLIGIGVLAVVNRVAANPLRTYNIIGVIAFFVSLAPNLAGAANPSAMPMGGTGTDYLILIVFHVVAAAVFLGVLNLLVRRMQPHR
>NC_009767.1|WP_011997811.1|340471_341791_+|extracellular-solute-binding-protein
MQWPVLVRRGWLVVLSSLLLVSCGLLEPPPPTPTPEPRVLRVYTVRDPAIEGVVEIVSQEFRRRHPDVQIELIDGSGDYSELRGSAAAGNVPDVVWLIDMLTESLLESDLIIDLEEFARGDDSVNLADVHPMALELGRSRKRPGLFMIPVSLETIQMYYNRSLWEQSGAPLPRDDWTWDDLIAACKRLQGAAPGVDCLSFTNASLNGYAWWVYWLPWVRGAGGDALSADGTQSTLSSPQSLTGLQAYVDLWLTHKIAAPPASGGRDCFVDQTCAAFFSFAGVAQRYRDQIGDRFAWDVQLVPSHPAGRFTGIGTYGFAVTRASRDPQLAWDFVKIFIAPETQRALTAAHLGTPVLLSLSNDPTMMQLPAPPANMRAFVIGREAGIAPPRYPTACGSVYTGPVASALDDALNAAVRGLASVEGAFAVADRKIQTCLDANR
>NC_009767.1|WP_011997809.1|338404_339958_-|aldehyde-dehydrogenase
MDDHITDDLPCYGLYINGSWVDAEGGLMPVNEPARGRTMAYVARGSAADVDRAVAAAREAFDRGPWPHTPGHERARILNAIADLIEEHTAEFAELESRNLGAPLRKTTFVDIPWSVEHLRVFAELATIHPYEALPWTDIPSVSWNFVWREPIGVCGQIVPWNYPLLMTIWKIAPALAAGNTVVLKPASYTPLTALMLMRLIHEAGLLPRGVLNIVTGPGAEVGDALARHPGVDKVSFTGSTETGRHIMRLASDTIKRLTLELGGKSPSLVMPDADLELATDGVLFGVFFNGGQSCEAGTRCLVPESLHDEFLERLVTRARSLRIGDPLDLETDLGPLVSEAQCRIVEEYIDVGKHEGARLVTGGKRARIPGFEYGPFIEPTIFTGVQNGTRLAQEEIFGPVLSVIPYRTVTEAIELANASRYGLGAAVWSRDLQGAIEVAKRIRTGTVWINDHHIILPRAPFGGYKQSGIGREHGIYGLMAYTELKHIHVDLMQKRSGRVWWDVLIPQRDQSEEAGL
>NC_009767.1|WP_011997808.1|337816_338101_-|DUF4258-domain-containing-protein
MTNAQPIAHYRISEHARNEMSRRQISESEITSVLAAPEQVEIVREGRAVYQSRFQIGDPPKLYLVRVFVDVDVIPPVVVTVYRTSKVAKYWGKE
>NC_009767.1|WP_011997807.1|337613_337820_-|DUF2283-domain-containing-protein
MKVIYDRETDTLTVIFADTLVAESDEDKPGVILDYDMAGNLVSIEILDASRRVASPERIEYQVTLPTL
>NC_009767.1|WP_011997806.1|336393_337017_-|TetR/AcrR-family-transcriptional-regulator
MQDILNEPAYGPTAARILMTATRLFMQRGYSAVSISDIVQAADVTKPTLYYHFSDKEELFVLVAIHMLAEMYATMRRAIANQPDTRARLVALAQVLLHEPNSDTRMMRHQAREHLNPERQRRLAEAFKRYMVDPLREVMQQGIDSGELRGRSADDLTMLFLGLMEGFQRQTAPPVEPERSDIYQSISTDHFSAETLVDLFLYGTAAR
>NC_009767.1|WP_011997805.1|334541_336305_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MTSVPQAKPGVRFPRPSLPVIIAAVLIVAVVATLVVPRLAGSGADPLRGGTPVTITRETLIAGISATGRIEPRQEAALGFTLPGRVADILVAEGDLVQAGAPLIRLDSREAEAQIASARAALAQAEADLRQLQEGATPEEIAQAQAQVESARGALAQTAGSVTNADIAAARARVEEARARLSALQGAPNNDELTAARAALTEAQAALDRQRSALATAKIDAERQVFERANRLRDAQTAFAAARDNLARVEADGKDPLTGAPLTDAGKRAYADAFAQAERAMQDAERALNQARIAHETARQNEITGLAEAEARVATAQANLDALLTPNPDRIAAARAALAQAEADLARLLGEQRQGALAAQQANLAAAEANLARLTADPRATDLARAQARVAQAQAQLDLAQIRLDDTTLKAPFTGVVARITVAPGEQAGQNPVLTLIDVSRFNVTVTVDEVDVARVAPGQEVEVLIDALGPPPLTGVVQRIAPQATNERNVTAYEVELEVTPGERPVRSGMTASATIITAKRENAISVPVQAIREENGVTVVDVIVTNNGRTTLVAQPVEVGIRAGDRVEIVSGLQEGQQVLLPGAR
>NC_009767.1|WP_011997804.1|333642_334476_-|ABC-transporter-ATP-binding-protein
MHPETEYITPVGAIDFVTEPVVRIEHVTKEFITGGNRFRALDDVSLDIHRGEMVAIMGPSGSGKSTLMTILGLLDVPTSGSYWLDGQDVSKLDRVQQARVRNQKLGFVFQNFNLLPRLTALKNVELPLVYGRVGAREREERARQALEAVGLGAKMNNRPNELSGGQKQRVAIARALVSNPAMVLADEPTGALDTRTGAEIMALFRQLNREQGITIVIVTHDPEIGKQMDRVIGLRDGRISENILQEYYHVVPAAEELELPMREKEPVAVPVIRTEQE
>NC_009767.1|WP_011997803.1|332391_333636_-|FtsX-like-permease-family-protein
MFKELALMAVDSLRANMFRSLLTMLGIIIGSATLVAVLSLGNALQSQVFERFVDLGTRRIAVLPGDPQARGARDIPGYGLLSIQDYRALEQLVARHPDVFRTIVPEVSLRVQARFGSSAANPTVVGTTKDYQLVQTVPVQYGRFLTDDDDRQAARVAVLGALIAEDLFGKENVKDAIGKTIEVNGQPLQVVGILRQLGGPFSSDQRILTPVSTARLRIAGSQDLPGRGLQMSSILISLQSEQMVARGEALVTATLRATRNVPDGAIDDFRLNLPTQALNVLAGINGAITGFIALVAGISLVVGGIGIMNIMLVAVTERTREIGVRKALGATDSDVLSQFVLEAVAISVAGSLIGVTGAIGLVTLVGAAAGLSVSISWVAVFLALTFACAIGVGFGYYPARRAALLLPIEALRYE
>NC_009767.1|WP_011997814.1|344711_345023_-|hypothetical-protein
MPRRLSLPCDRLCAMYEAGATTITLARLYDCHPATIARYLRQCGVTLRTGRFTARPFDEALFRRLYLEEQLPLTRIAIALNVSVSTLGNWRRRLGIPPRRRRA
>NC_009767.1|WP_011997815.1|345121_345454_-|helix-turn-helix-transcriptional-regulator
MSTEQNRRRRRATYVWKPEMIRALREHMDLTQRELADLLEVRQQTISEWETGLHTPHRSTQKTLSMVAERAGFPYLPQTAETPADGDGAQHNGEAPAERVDAGGAGANSD
>NC_009767.1|WP_011997816.1|345632_346259_+|hypothetical-protein
MALISYEELATGLEEAWLIAGLHEHAVIESIQPETLDRTYRAELFPEHPEPIGEGWSPPWVELNLVWTAAHQLYSEGRDIAPGPLELAWTYTVDIRSVDRSDAELIRAFNGAVRAALRRVAPDFPPPADYIAVEIRRGYRIDEKPSPVYVQIIGTNVTDLSDLWGQRSSEALRDVLRSELLIVATLLHSLGETFTPGGIGGYRSVDTA
>NC_009767.1|WP_011997817.1|346409_346775_+|conjugal-transfer-protein-TraR
MPSTTIFAAQRERLEAERDALLAEIAALERERASREESAGIGNVVAEEMMETLVRERDLALRSNARDLLEQVNAALRRIDEGTYGICADCGEPIPLERLEALPYATLCVRCQAARERARRW
>NC_009767.1|WP_011997818.1|347332_347908_+|signal-peptidase-II
MTNSRTTLRHELQRYWLRPAVIAATILAFDQATKAWVLNTLGTVEGTSRPLIGDWLSLTLIHNTGIAFGMFDAGFSHVFTATSLIISLGAMYFYRYHLPGPHLISQVCLGLIVGGAIGNIIDRLRFGYVIDFVHVHWFPGIFNVADSAITVGVAVLALFLLLTGDGDQRRAGSDDALLNDLLNQDPRRPGP
>NC_009767.1|WP_157042757.1|348143_349088_+|RluA-family-pseudouridine-synthase
MHGELLQLIVEAADEGHRLDRYIAGKVPDLSRTYARHLIEDARVLLNNRQVRPASPVRVGDVVTVQLPEPQPVGLVAEALPLQIVYEDDDVVVIDKPAGIVVHPAPGHNRGTLVNALIARYPEMAISGDLRPGIVHRLDRDTSGLLVAARNDRALHSLQAQQQARRMLKIYLVVVEGRMNESGGVIDAPIARHPTDRVRMAVMAGGRPARTHWRVLEELGEYALIEARLETGRTHQIRVHFASRNRPVLADPLYGPKRPRATFGLTRQFLHAHRLGFALPSSGAWVEFTSPLPDDLAAALARLRQRANSAIRRT
>NC_009767.1|WP_011997820.1|349704_350634_+|malate-dehydrogenase
MRPKISIIGAGFVGSTAAHWIASKELGDVVLVDIIDGVPQGKGLDLLQAGPIEGFDVKITGTNDYAATANSDIIIVTSGAPRKPGMSREDLIRVNADITRDCISKAAPLSPDAVIIMVNNPLDTMTYLAKQVSGFPKNRVVGQAGVLDTARYRTFIAMEAGVSVEDIQAMLMGGHGDEMVPLPRFTTISGIPVTEFISKERLDAIIERTRKGGGEIVNLLKTGSAYYAPSAATVQMVEAILRDKKRVLPCACYLEGEYGLNDIYFGVPCVLGAGGVERVLELPLNDEEMALVRKSAEAVSSSIATLKQM
>NC_009767.1|WP_011997821.1|350980_352756_+|GAF-domain-containing-sensor-histidine-kinase
MDAAERIPLPSKISLQRQMIGGDRFYNLSRWGVTILLIGIVQLIAGESLWSPTAAHSPMIVVMWGYVVFTTLATIMVFIPQIAAFLRFSFAVDILALLLLTLFNPDPREILYPLFLLPLVNAAFRLNSSASLLTGLITAFAYIGAYLIARIGPGNGSIPSDPLGYVGLTLRALALVFIPWITGGLAERWSASNRLSVALAEEKAAEALREANAYRDQTRALYEAAYTLATTNDYQNVLEVTLDESQKLAPYTCGMVLLSTGQTNQLFVASSRGLDPNDQERIVTIGPGAIGRTIRGSDPVVLDNFRDDPELMAFTSLHRHRTACLLPLRFGLNTYGVMVFASDHERAFGHEEVEKLAALASYALVALQNAQLIYDLQQERTKLLSKEEEVRHQLARDLHDGPAQALAAITMNVEFIKRLLERDPARVLPELDKLGQLAKRTTHDVRTMLFELRPLALETQGLDVTLQQYFERFRDNPTKIILEADTIDAQLDTKVEGTLFNIVQEAVNNALKHAKAQHIWVRLRQTPTTLETIIEDDGRGFDVEKVRASYDQRGSFGLLNIEERASLMGGVAEVTSTPGKGTTWKVIVPLQ
>NC_009767.1|WP_011997822.1|352752_353661_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MTSANPYLSLARVRAALHALDLRPSRSMGQNFLIDGAALAKIVNAAQLTSDDTVIEVGPGLGVLTWELMHRTRAVIAVELDHRLADRLRAEFRAFSNLAIIQGDVLRLPPEAILAEHDPDASSGARPYKVVANLPYAITSAALRHFLSNPLRPALMVVLVQREVADRICARPGNLSVLAHAVQIYAEPEIIARIPASCFFPTPEVESTVLRLRIRPQPAVVPDQPEALLRLIKAGFLHPRKQLGNALPGGMAAMGMKTDKQKILNALTAAGINATRRAETVTLDEWGAVYRALKMDSEKVKG
>NC_009767.1|WP_011997823.1|354091_354769_-|HAD-IA-family-hydrolase
MTREYDVITFDCYGTLIDWDGGIRSGFAASARRAGVEIDLDAALAAYHTIEPQVEAGEYRPYRQVLAETAQRAAAMLGWPMDDDTAQFFAATLPQWTPFDDTNPALERLHAAGYRLGILSNVDDDLLAATIRHFTAPIDLIVTAQQVGSYKPDTGHFIAARERIGGLRWLHVAQSHFHDVVPAARLGLPVVWVNRKREPLPPDGPAPLAEVPDLRAFVEWIEGRG

Crispr_ID: NC_009767_6

• CRISPR_ID: NC_009767_6
• CRISPR_location: 364358-364436
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_6

Consensus_repeat	Method
CAACGACATCAACGTTGCCGGGCTT	CRISPRCasFinder

spacers of NC_009767_6

>6.1|364383|29|NC_009767|CRISPRCasFinder
ACGCCGGATGGCGCGAACACGCCATCGGG

CRISPR arrays and Neighbor proteins around NC_009767_6

CRISPR arrays

The CRISPR arrays of NC_009767_6

>merge|NC_009767|6|364358-364436|CRISPRCasFinder
CAACGACATCAACGTTGCCGGGCTTACGCCGGATGGCGCGAACACGCCATCGGGCAACGACATCAACATTGCCGGGCTT

>NC_009767|6|6|364358-364436|CRISPRCasFinder
CAACGACATCAACGTTGCCGGGCTT	ACGCCGGATGGCGCGAACACGCCATCGGG
CAACGACATCAACATTGCCGGGCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_011997838.1|376113_376791_+|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl|CDD|376498
NC_009767.1|WP_041330129.1|372293_373475_+|putative-C-S-lyase	unknown	unknown	gnl|CDD|275146
NC_009767.1|WP_041331394.1|357044_357866_+|metallophosphoesterase	unknown	unknown	gnl|CDD|277331
NC_009767.1|WP_011997827.1|359130_359793_+|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|366010
NC_009767.1|WP_011997839.1|377363_378062_+|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|180984
NC_009767.1|WP_011997840.1|379068_379698_+|ArsR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225222
NC_009767.1|WP_041330128.1|354790_356173_-|LCP-family-protein	unknown	unknown	gnl|CDD|367673
NC_009767.1|WP_011997834.1|369540_370353_+|YhfC-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|337619
NC_009767.1|WP_011997826.1|358609_359035_+|DUF3054-domain-containing-protein	unknown	unknown	gnl|CDD|378616
NC_009767.1|WP_011997837.1|375201_376044_+|6-pyruvoyltetrahydropterin-synthase	unknown	unknown	gnl|CDD|376501
NC_009767.1|WP_011997835.1|371029_372025_-|response-regulator	unknown	unknown	gnl|CDD|225971
NC_009767.1|WP_011997829.1|360542_363041_+|TIGR03663-family-protein	unknown	unknown	gnl|CDD|274709
NC_009767.1|WP_157042758.1|359845_360463_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|223736
NC_009767.1|WP_011997823.1|354091_354769_-|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|319787
NC_009767.1|WP_011997820.1|349704_350634_+|malate-dehydrogenase	unknown	unknown	gnl|CDD|180477
NC_009767.1|WP_011997822.1|352752_353661_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl|CDD|234708
NC_009767.1|WP_011997833.1|368691_369540_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997821.1|350980_352756_+|GAF-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_009767.1|WP_011997832.1|367212_368679_+|leucyl-aminopeptidase	unknown	unknown	gnl|CDD|234863
NC_009767.1|WP_011997831.1|366767_366983_-|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl|CDD|238219

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_011997838.1|376113_376791_+|GTP-cyclohydrolase-I-FolE	gnl|CDD|376498	pfam01227, GTP_cyclohydroI, GTP cyclohydrolase I. This family includes GTP cyclohydrolase enzymes and a family of related bacterial proteins.	8.08908e-112
NC_009767.1|WP_041330129.1|372293_373475_+|putative-C-S-lyase	gnl|CDD|275146	TIGR04350, aminotransferase_class_I_and_II, putative C-S lyase. Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A).	2.38647e-165
NC_009767.1|WP_041331394.1|357044_357866_+|metallophosphoesterase	gnl|CDD|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	3.80912e-63
NC_009767.1|WP_011997827.1|359130_359793_+|histidine-phosphatase-family-protein	gnl|CDD|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	2.22084e-49
NC_009767.1|WP_011997839.1|377363_378062_+|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|180984	PRK07454, PRK07454, SDR family oxidoreductase.	8.34427e-58
NC_009767.1|WP_041330128.1|354790_356173_-|LCP-family-protein	gnl|CDD|367673	pfam03816, LytR_cpsA_psr, Cell envelope-related transcriptional attenuator domain.	9.39518e-46
NC_009767.1|WP_011997834.1|369540_370353_+|YhfC-family-intramembrane-metalloprotease	gnl|CDD|337619	pfam10086, DUF2324, Putative membrane peptidase family (DUF2324). This domain, found in various hypothetical bacterial proteins, has no known function. This family appears to be related to the prenyl protease 2 family pfam02517, suggesting this family may be peptidases.	1.57465e-40
NC_009767.1|WP_011997826.1|358609_359035_+|DUF3054-domain-containing-protein	gnl|CDD|378616	pfam11255, DUF3054, Protein of unknown function (DUF3054). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	1.24811e-20
NC_009767.1|WP_011997840.1|379068_379698_+|ArsR-family-transcriptional-regulator	gnl|CDD|225222	COG2345, COG2345, Predicted transcriptional regulator [Transcription].	1.95405e-36
NC_009767.1|WP_011997835.1|371029_372025_-|response-regulator	gnl|CDD|225971	COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].	8.0082e-97
NC_009767.1|WP_011997829.1|360542_363041_+|TIGR03663-family-protein	gnl|CDD|274709	TIGR03663, TIGR03663, TIGR03663 family protein. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.	1.01926e-39
NC_009767.1|WP_157042758.1|359845_360463_+|helix-turn-helix-domain-containing-protein	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	8.66518e-29
NC_009767.1|WP_011997823.1|354091_354769_-|HAD-IA-family-hydrolase	gnl|CDD|319787	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase. L-2-Haloacid dehalogenase catalyzes the hydrolytic dehalogenation of L-2-haloacids to produce the corresponding D-2-hydroxyacids with an inversion of the C2-configuration. 2-haloacid dehalogenases are of interest for their potential to degrade recalcitrant halogenated environmental pollutants and their use in the synthesis of industrial chemicals. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.03609e-47
NC_009767.1|WP_011997820.1|349704_350634_+|malate-dehydrogenase	gnl|CDD|180477	PRK06223, PRK06223, malate dehydrogenase; Reviewed.	0
NC_009767.1|WP_011997822.1|352752_353661_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl|CDD|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.66098e-104
NC_009767.1|WP_011997837.1|375201_376044_+|6-pyruvoyltetrahydropterin-synthase	gnl|CDD|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	3.93123e-42
NC_009767.1|WP_011997821.1|350980_352756_+|GAF-domain-containing-sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.02761e-48
NC_009767.1|WP_011997832.1|367212_368679_+|leucyl-aminopeptidase	gnl|CDD|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NC_009767.1|WP_011997831.1|366767_366983_-|heavy-metal-associated-domain-containing-protein	gnl|CDD|238219	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.	5.01382e-18

Protein sequences

>NC_009767.1|WP_011997829.1|360542_363041_+|TIGR03663-family-protein
MSIAELPPQVAAPPGDSATPATTRPHAAIISLEQAAYLAILLLAVISRLWGLGDRALHHDETLHAYFSWLVFRGEGYVHDPLLHGPFLYFFGALIYFFFSVSDATARLGPALFGIALVMLPYLLRRELGRSAALLASVYILISPAFMYIARFIRHDPYTILFELLALIGAVRYATTRRPLWLYVVALSLALMFVTMETFFLYMAIFAPLVALVFFWKVWKPGAAVLAALGVAVVALVFWLPGYPERPFPSSDTVNRVAGPYICPSELQPFPPPNPMRVARPGPIFGWSPLATFDNNYALCVRHQPDDNFGLYFIKLGEFVNHPAILTGLVLVLATLAALWWVVWRRRDATGATIWEHACAGGDATVATFASLGRDRRLLIAGGLFFLVYTLFFTAFLTNTAGVITGTTGSLLYWLAQHEVERGGQPPHYYAVLLAIYEPLLIMWGVVGLAMAGVLGWRRVMRRNRDADSAADGRESGADDERASSGDDPVAWLPLVLAWWSIATFALYSWAGEKMPWLTVHVALPLTLLGAWAAGRVLVWWRRGITAEAERNGFSLSRIVRPFPIFLGLLTVISIYCLLLITVTIRADAQPAALTPWIAPLWMVLMALLTAGAWVLRGRRWTTGALAAGVTLIVAAYTLRSAYQLSFRYGDIPREMMIYTQTSPDVKRVIDRLDEALRRRSNATTATVWYDNETVWDWYHIRFARAEEQPPLLQRAPGDDVIAVLMLLENYENEQNRRFLEGFLVQRYPLRWWFPEEETYRLPRDWMTAPVDRQSSLLMRMLRQPFDPRTSQQFWQYVLYRVPPHPLGSTDFVVAVRPEIAPEMGLGFGGER
>NC_009767.1|WP_157042758.1|359845_360463_+|helix-turn-helix-domain-containing-protein
MSALRDIHGEIAAVQRPAGYVFYGLEDSGAEMYLLYRGRVRLYTISPEGRALTILILDAPAVFGEVTLAEGAYHDSYAISVTPCTVGAVHRETLRRALRNQPSLALRFMTVMGQRLRAIERKLSDIAFKSVPQRLAAALLGLWTEQRDTPPTVRSTHQQLAELIGSHRETVTKALGDFRAAGLIRVDDDAIHLIDLVRLTHLAYS
>NC_009767.1|WP_011997827.1|359130_359793_+|histidine-phosphatase-family-protein
MTTNLYLIRHGEAFSNVEPIMGGMRGDRGLTDRGFAQVHALARRLARGEIVADVLYASTLPRARMTAEPVAEALNLSIHWDDDLQELRPGEADGMHIDEARARFPQMSLFFKEYFTPIAPGGESWAGFQFRASAALERLITRHHGQTIVAVCHGGIVEVSFLFMLGLGPHARGRNAFHVQNTAITHWRQMTSRDGRMEWQLITHNDCWHLHELESERDHA
>NC_009767.1|WP_011997826.1|358609_359035_+|DUF3054-domain-containing-protein
MAIHEQSHSATAIGRRTATLALGDVFALLIFAAIGRASHGEEAGLTALAQVAETAAPFIVGWLAVAPLIGAYRADVTGAPPRMLTRTALTWLVAWPIGLGLRALIRQTTIPLSFALVTFITVLTIMILWRGAFTLIAARRS
>NC_009767.1|WP_041331394.1|357044_357866_+|metallophosphoesterase
MAGISLFGWPVIAAGGAFSIAALGHMLLGEPARPILERVTMRLPALPPELDGLRIGHLTDSHLGFRYSETNLAWGVEQMQRERPELIVLTGDIVTHHWAIPDVPRLLRGLRAPLGVYAVPGNHDHWEGLADLRAALTLANIPLLLNEHRRLSWNGGDLWLIGIDDVWDGRPSLRQALRGVPPHGFKLLLSHAPDVAESAAHVGIHVQLSGHTHGGHLRLPLLGPFTLPRYGKRYIIGEYQVDGLTLYVSRGLGGAPLRLLCPPEATIITLRRG
>NC_009767.1|WP_041330128.1|354790_356173_-|LCP-family-protein
MYDRYDKDTSNRQARRRAYTGDTIAIRRARVATPPARCSAWQRIRRVLMLSGVLLIILVALLYWQFAAAVAPLSVADARPFPPLNPPGTGINVLLIGVDERPDHPEEGVRSDTLIVVHLDTIGRRVSLLSIPRDTRVDVRDIGPTKINVAYGRGYTAAEKLYGETTTPAQGGMALAAETVERFLDLPIHYTAQINFDGFARVIDALGGVTIDVPRRIVDDAYPTPDFGTVRIAFEPGPQRMDGARALIYARTRHADSDFGRAERQQQVIRAIIDELRSRGPIGAALLAPALGRALDGAFATTLPLSRPDMLLGMAWIATGIDPSAIGQYRIAPDTAPNFREIGSDILWDPEEVRGVVRTFLATPDVETEEARIQVLNGAGITGLARRVSGELESAGFTVVPAADAPRSDVLRTIVYDVTGKPATARRLAVLLNADIRRGSPDGVNPTVDIVVVLGRDQVK
>NC_009767.1|WP_011997823.1|354091_354769_-|HAD-IA-family-hydrolase
MTREYDVITFDCYGTLIDWDGGIRSGFAASARRAGVEIDLDAALAAYHTIEPQVEAGEYRPYRQVLAETAQRAAAMLGWPMDDDTAQFFAATLPQWTPFDDTNPALERLHAAGYRLGILSNVDDDLLAATIRHFTAPIDLIVTAQQVGSYKPDTGHFIAARERIGGLRWLHVAQSHFHDVVPAARLGLPVVWVNRKREPLPPDGPAPLAEVPDLRAFVEWIEGRG
>NC_009767.1|WP_011997822.1|352752_353661_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MTSANPYLSLARVRAALHALDLRPSRSMGQNFLIDGAALAKIVNAAQLTSDDTVIEVGPGLGVLTWELMHRTRAVIAVELDHRLADRLRAEFRAFSNLAIIQGDVLRLPPEAILAEHDPDASSGARPYKVVANLPYAITSAALRHFLSNPLRPALMVVLVQREVADRICARPGNLSVLAHAVQIYAEPEIIARIPASCFFPTPEVESTVLRLRIRPQPAVVPDQPEALLRLIKAGFLHPRKQLGNALPGGMAAMGMKTDKQKILNALTAAGINATRRAETVTLDEWGAVYRALKMDSEKVKG
>NC_009767.1|WP_011997821.1|350980_352756_+|GAF-domain-containing-sensor-histidine-kinase
MDAAERIPLPSKISLQRQMIGGDRFYNLSRWGVTILLIGIVQLIAGESLWSPTAAHSPMIVVMWGYVVFTTLATIMVFIPQIAAFLRFSFAVDILALLLLTLFNPDPREILYPLFLLPLVNAAFRLNSSASLLTGLITAFAYIGAYLIARIGPGNGSIPSDPLGYVGLTLRALALVFIPWITGGLAERWSASNRLSVALAEEKAAEALREANAYRDQTRALYEAAYTLATTNDYQNVLEVTLDESQKLAPYTCGMVLLSTGQTNQLFVASSRGLDPNDQERIVTIGPGAIGRTIRGSDPVVLDNFRDDPELMAFTSLHRHRTACLLPLRFGLNTYGVMVFASDHERAFGHEEVEKLAALASYALVALQNAQLIYDLQQERTKLLSKEEEVRHQLARDLHDGPAQALAAITMNVEFIKRLLERDPARVLPELDKLGQLAKRTTHDVRTMLFELRPLALETQGLDVTLQQYFERFRDNPTKIILEADTIDAQLDTKVEGTLFNIVQEAVNNALKHAKAQHIWVRLRQTPTTLETIIEDDGRGFDVEKVRASYDQRGSFGLLNIEERASLMGGVAEVTSTPGKGTTWKVIVPLQ
>NC_009767.1|WP_011997820.1|349704_350634_+|malate-dehydrogenase
MRPKISIIGAGFVGSTAAHWIASKELGDVVLVDIIDGVPQGKGLDLLQAGPIEGFDVKITGTNDYAATANSDIIIVTSGAPRKPGMSREDLIRVNADITRDCISKAAPLSPDAVIIMVNNPLDTMTYLAKQVSGFPKNRVVGQAGVLDTARYRTFIAMEAGVSVEDIQAMLMGGHGDEMVPLPRFTTISGIPVTEFISKERLDAIIERTRKGGGEIVNLLKTGSAYYAPSAATVQMVEAILRDKKRVLPCACYLEGEYGLNDIYFGVPCVLGAGGVERVLELPLNDEEMALVRKSAEAVSSSIATLKQM
>NC_009767.1|WP_011997831.1|366767_366983_-|heavy-metal-associated-domain-containing-protein
MISDQFRVPGISCQHCVNAITKAVSALPGVRQVVVNLGDKSVRVDHDRQVTADDLIRAINDAGYDDVAVLV
>NC_009767.1|WP_011997832.1|367212_368679_+|leucyl-aminopeptidase
MRVTVTAGDPLSTATDLLVLGLWEEESLPSPLDDLIEPGDWSGKAKQTLLIYPRGALPARRVLLIGLGKRSAPDLDQMREVAAIATQRARELKVDRFAFVIPVLSEQTPETVAAAITEGSLLGSYRFLEYKSDLKPEDRREVDELTLLAPVDAVDEAARGIARGGAVARGVNLARDLANLPPNDLTPARLAERARELAVAFDLPITVLGPAEMREQGFGGILAVGQGSVNEPRFIVIDYGAQYADAPTICLAGKGMTFDSGGISIKPAENMDAMKMDMSGAAAVLGALHAIAELRLPLHVVALIGAAENMPGGSAYRPGDILKTLSGKMIEVLNTDAEGRIVLADVLTYAQRYHPSAIIDLATLTGAISVALGPHAIGLFANDDALAQRLVRAGEAAGERAWQLPLWQPYREMVKSEIADVRNATGRQAGAITAAAFLNAFVGDYPWAHLDIAGTAWTDSKPKAYQPKGATGVGVRLLLQALRDWTQA
>NC_009767.1|WP_011997833.1|368691_369540_+|hypothetical-protein
MNPAPRYDRIVSLVLLALLGLAVVFLIDINPNILRARFGGDFPSITVSWLLIASLVVIASAGADIFIRAHPQMQTRSLPTIHLGIVQVELAPSFWILPSFAIIASFAFFRLFSASLETLAFVLVLIAAGGFLFGTLVAQHYSLDRRANVRQGARLALQAMALLLAFGVFSAIYYARMRTLYSATLIGASATLLAYAMLSLTSGRHLFVLSLLVGLTLAEATWALNYWAASFLTGGALLLALFYIITGLLQGHLEGTLTRRVIWEYGALGSLMLLAVMYTTLR
>NC_009767.1|WP_011997834.1|369540_370353_+|YhfC-family-intramembrane-metalloprotease
MEPTFQIGSGRVAATIVAVLFEALFPLAAAWFVSRRLRVSWRYFAYGAIIFLLFQLITRVPLVLAIQRALAPQLQASRPLLFSWLAALALTAGLAEEIGRYVGYRWLFREEKTWSRAVMYGLGHGGLESIVLVAGLTLLGLINLLALSAVDLATLPLTDDQRELARQQLAAIAAQPDWLPLVGAWERLWTLPFHVALSVMVAQVFRRRQIWWLWVAIATHTLVNLLAVGVAPAFMLQGTAAILIPEVIVTLAGTASLWVIWRLRERDVAR
>NC_009767.1|WP_011997835.1|371029_372025_-|response-regulator
MAAKILVADDNPAMREAIVRFVEAEGYVALAARNGREALNLALAELPDLVLLDVTMPDYDGYEVCRRLKADPRTALIPVTMLTVLDAPEHRWRGIEAGADDFLTKPFDERLLRARIQSQLRTKRLTDQLERTESVIFALALAVEAKDMYTEGHLWRLAYYGEQLATAAGLGHDVRRAVWQGGLLHDIGKIGVADSILRKPAPLTPEEYAQIKQHPECGARIIAPMRFARDVAPIIRGHHEHWDGSGYPYGLRGEEIPIGARIIAIVDAYDAMTTDRPYRKALSPERAVQRLRARCGIQWDPSLTALFIMLIEQKRLIVPNDAGVTHHIPVV
>NC_009767.1|WP_041330129.1|372293_373475_+|putative-C-S-lyase
MPSMPHDFDQVFDRRRTGSIKWTFYGDDVLPMWVADMDFPAPPPILAALHARIDRGDFGYELPSPTLSECICERIHRLYRWDITPDQIVYIPSLVTGLNAVCRAIGESGDGVLVQTPVYPPFLTAPVNQGRVVQMAELTLVPNGRTFGYRVDYERMAAVVNDRTRLFILCNPHNPTGEAYSHEELLRMAAFCEQHDLIICSDEIHCDLLLGDTRHTPIATLAPEIAERTITLMAPSKTFNIPGLKASFAIVTDPNLRKRLMAAMEGIVPWLNSFALAAMEVAYRDCDDWLSDLRAYLTANRNAVTHFVIERMPQVKTTIPQATYLAWFDCREAGIEGNPYEFFRREAKVALNDGVPFGAGGEGFVRLNFGCPRALLMEGLERMKSALDKRSFK
>NC_009767.1|WP_011997837.1|375201_376044_+|6-pyruvoyltetrahydropterin-synthase
MIYATRRFEFSAAHRYWRSDWSAEENERVFGPCAYPYGHGHNYTLDVTITGDLDPRTGMVMNMTELKALVSEVLEEFDHKHLNEDTPYFCEQLPTTENIVRVLWRLIAARLPHTARLARLRLYETSDLWAEYDGAEETTFARMYAFSAAHRLHSPLLSDKENLAIYGKCNNPNGHGHTYTLEVTVAGPVDPETGMVIDLTAMDRTVRSVLDRLDYRHLDREIAAFATQPSTAENIVIYLWQELAPRFEGRLRHLKLWETRKNVFEYTGPGAALPHTRHNR
>NC_009767.1|WP_011997838.1|376113_376791_+|GTP-cyclohydrolase-I-FolE
MTYHNGNNGHHDHALADVDEREYETLIIQGRGKLEGMSYHSDAAIEDAVRVILKQIGENPEREGLQKTPSRVAKMYAELTAGYHIDPDALINEAVFSVGYDEMVLVKNIEFSSLCEHHMLPFMGRVHVAYIPNGRVVGLSKIPRIVEMFARRLQVQERMTVQIADFINQRLEPLGVAVVAEGVHMCAVMRGVKKAGATMVTSAMRGVFRDDPKTRSEFMAHIERG
>NC_009767.1|WP_011997839.1|377363_378062_+|SDR-family-NAD(P)-dependent-oxidoreductase
MKTILITGASRGIGRATALALAAPGVAMTLAARSVSLLDEVAADVRAAGASAVIAPCDVTDEDEIRHLIEQTTIATGRIDLLVHSVGGAYVAPVTQITQTHWDEQVRVHLTSLFLICKHATPFMHNGGLLVYVASVAARQVFPNWSAYCAAKHGALGLLGAVREEVRPYGVRVTAVLPAATDTGLWDDLPGDWNRAAMMQPADVAAAIASLAAYPPHVAVEELTVGHVAGRL
>NC_009767.1|WP_011997840.1|379068_379698_+|ArsR-family-transcriptional-regulator
MTLAQYTEDTPAGKILTYLRRHGEATIKDLEELLGISTTAVREHLAHLEAKGLLTTRQARGGPGRPRLVYSLTPRAEDLFPKEYDTLVTLLLREIASREGKERLDALLEAVGKRLAEEYRGQVVGDDVEERLAHLRVTLEARGIPVEVTPDGALQVFACPYHDVAQEHAGVCIMERRMLEQVLGERVEIEGTIREGRRNCHFQITRSSE

Crispr_ID: NC_009767_7

• CRISPR_ID: NC_009767_7
• CRISPR_location: 403841-403947
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_7

Consensus_repeat	Method
ACCTACAACGAGATGCCGTTACAGAAATAACCGTCAC	CRISPRCasFinder

spacers of NC_009767_7

>7.1|403878|33|NC_009767|CRISPRCasFinder
GCGAGCCGTTCTTTGTTTCCGCTGCGAACGTGT

CRISPR arrays and Neighbor proteins around NC_009767_7

CRISPR arrays

The CRISPR arrays of NC_009767_7

>merge|NC_009767|7|403841-403947|CRISPRCasFinder
ACCTACAACGAGATGCCGTTACAGAAATAACCGTCACGCGAGCCGTTCTTTGTTTCCGCTGCGAACGTGTACCTACAACGAGATGCCGTTACAGAAATAACCGTCAC

>NC_009767|7|7|403841-403947|CRISPRCasFinder
ACCTACAACGAGATGCCGTTACAGAAATAACCGTCAC	GCGAGCCGTTCTTTGTTTCCGCTGCGAACGTGT
ACCTACAACGAGATGCCGTTACAGAAATAACCGTCAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_011997866.1|407297_408014_-|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl|CDD|234997
NC_009767.1|WP_011997874.1|417184_420766_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|226415
NC_009767.1|WP_011997869.1|410673_411510_-|pantoate--beta-alanine-ligase	unknown	unknown	gnl|CDD|376824
NC_009767.1|WP_011997862.1|402272_403154_+|three-Cys-motif-partner-protein-TcmP	unknown	unknown	gnl|CDD|275267
NC_009767.1|WP_011997873.1|416184_417195_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293807
NC_009767.1|WP_011997868.1|409768_410287_-|adenine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|235028
NC_009767.1|WP_011997853.1|390241_390718_+|M67-family-metallopeptidase	unknown	unknown	gnl|CDD|163701
NC_009767.1|WP_011997856.1|392462_392672_+|preprotein-translocase-subunit-SecG	unknown	unknown	gnl|CDD|235881
NC_009767.1|WP_011997854.1|390935_391217_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|340594
NC_009767.1|WP_011997876.1|423168_424647_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997859.1|396027_399267_+|isoleucine--tRNA-ligase	unknown	unknown	gnl|CDD|235681
NC_009767.1|WP_041331408.1|421179_423015_+|translational-GTPase-TypA	unknown	unknown	gnl|CDD|224138
NC_009767.1|WP_011997855.1|391240_392392_+|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl|CDD|180967
NC_009767.1|WP_049768777.1|401567_401885_-|hypothetical-protein	unknown	unknown	gnl|CDD|236608
NC_009767.1|WP_011997858.1|394719_395586_+|sulfurtransferase	unknown	unknown	gnl|CDD|225450
NC_009767.1|WP_011997857.1|392796_394467_+|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173878
NC_009767.1|WP_011997870.1|411516_412353_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl|CDD|234723
NC_009767.1|WP_041330131.1|400641_401256_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997865.1|406537_407269_-|metallophosphoesterase	unknown	unknown	gnl|CDD|224682
NC_009767.1|WP_011997871.1|412428_412797_-|hypothetical-protein	unknown	unknown	gnl|CDD|224929

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_011997866.1|407297_408014_-|phosphoadenylyl-sulfate-reductase	gnl|CDD|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.97173e-95
NC_009767.1|WP_011997874.1|417184_420766_-|AAA-family-ATPase	gnl|CDD|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	3.14368e-30
NC_009767.1|WP_011997869.1|410673_411510_-|pantoate--beta-alanine-ligase	gnl|CDD|376824	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (EC:6.3.2.1) catalyzes the formation of pantothenate from pantoate and alanine.	7.08355e-167
NC_009767.1|WP_011997862.1|402272_403154_+|three-Cys-motif-partner-protein-TcmP	gnl|CDD|275267	TIGR04474, conserved_hypothetical_protein, three-Cys-motif partner protein. Members of this family occur regularly as a partner to as a member of family pfam07505, which has been called a phage protein but which seems to occur also in other contexts. Members average about 400 residues in length, but the conserved region covered by the model averages 260 residues and excludes the C-terminus. Conserved motifs suggest enzymatic activity. Note that its frequent partner protein (see pfam07505) has a three-cysteine motif that resembles the Cx3CxxC motif of radical SAM proteins, and that in one branch (see TIGR04471) actually becomes Cx3CxxC. We suggest the name three-Cys-motif partner protein (tcmP), and renaming pfam07505 to three-Cys-motif family protein.	8.58747e-53
NC_009767.1|WP_011997873.1|416184_417195_-|MBL-fold-metallo-hydrolase	gnl|CDD|293807	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Bacillus subtilis yflN protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	4.1876e-28
NC_009767.1|WP_011997868.1|409768_410287_-|adenine-phosphoribosyltransferase	gnl|CDD|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	5.93315e-97
NC_009767.1|WP_011997853.1|390241_390718_+|M67-family-metallopeptidase	gnl|CDD|163701	cd08070, MPN_like, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding). This family contains archaeal and bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation. The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	7.62695e-43
NC_009767.1|WP_011997856.1|392462_392672_+|preprotein-translocase-subunit-SecG	gnl|CDD|235881	PRK06870, secG, preprotein translocase subunit SecG; Reviewed.	5.9126e-06
NC_009767.1|WP_011997854.1|390935_391217_+|MoaD/ThiS-family-protein	gnl|CDD|340594	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins. CysO, also termed 9.5 kDa culture filtrate antigen cfp10A, together with CysM (Cysteine synthase M), forms a protein complex CysM-CysO that represents a new cysteine biosynthetic pathway in Mycobacterium tuberculosis. The replacement of the acetyl group of O-acetylserine by CysO thiocarboxylate to generate a protein-bound cysteine is catalyzed by CysM in a pyridoxal 5?-phosphate (PLP)-dependent manner. The family also includes QbsE that functions as the sulfide donor for the biosynthesis of thioquinolobactin in Pseudomonas fluorescens. A JAMM motif protein QbsD catalyzes removal of the carboxy-terminal dipeptide from QbsE. Both CysO and QbsE are similar to prokaryotic sulfur carrier proteins such as ThiS and MoaD, containing the beta-grasp ubiquitin-like fold.	2.97266e-43
NC_009767.1|WP_011997859.1|396027_399267_+|isoleucine--tRNA-ligase	gnl|CDD|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NC_009767.1|WP_041331408.1|421179_423015_+|translational-GTPase-TypA	gnl|CDD|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NC_009767.1|WP_011997855.1|391240_392392_+|molybdopterin-synthase-adenylyltransferase-MoeB	gnl|CDD|180967	PRK07411, PRK07411, molybdopterin-synthase adenylyltransferase MoeB.	0
NC_009767.1|WP_049768777.1|401567_401885_-|hypothetical-protein	gnl|CDD|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	8.05979e-07
NC_009767.1|WP_011997858.1|394719_395586_+|sulfurtransferase	gnl|CDD|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	8.54795e-107
NC_009767.1|WP_011997857.1|392796_394467_+|peptide-ABC-transporter-substrate-binding-protein	gnl|CDD|173878	cd08513, PBP2_thermophilic_Hb8_like, The substrate-binding component of ABC-type thermophilic oligopeptide-binding protein Hb8-like import systems, contains the type 2 periplasmic binding fold. This family includes the substrate-binding domain of an ABC-type oligopeptide-binding protein Hb8 from Thermus thermophilius and its closest homologs from other bacteria. The structural topology of this substrate-binding domain is similar to those of DppA from Escherichia coli and OppA from Salmonella typhimurium, and thus belongs to the type 2 periplasmic binding fold protein (PBP2) superfamily. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. The type 2 periplasmic binding proteins are soluble ligand-binding components of ABC or tripartite ATP-independent transporters and chemotaxis systems. Members of the PBP2 superfamily function in uptake of a variety of metabolites in bacteria such as amino acids, carbohydrate, ions, and polyamines. Ligands are then transported across the cytoplasmic membrane energized by ATP hydrolysis or electrochemical ion gradient. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	9.73507e-141
NC_009767.1|WP_011997870.1|411516_412353_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl|CDD|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	4.24235e-158
NC_009767.1|WP_011997865.1|406537_407269_-|metallophosphoesterase	gnl|CDD|224682	COG1768, COG1768, Predicted phosphohydrolase [General function prediction only].	1.04814e-68
NC_009767.1|WP_011997871.1|412428_412797_-|hypothetical-protein	gnl|CDD|224929	COG2018, COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only].	5.62876e-27

Protein sequences

>NC_009767.1|WP_011997862.1|402272_403154_+|three-Cys-motif-partner-protein-TcmP
MTTHTFGGDWTDDKLERLRKYLAAYTTIFNKNERARKLKTIYVDAFAGTGYRDRKTQPNDQLPLFPELEQPEAAAFLDGSARIALGVEPPFKQYLLIERDSKREQALQQLKRDFPDKQIKIVKEDANNYLTQWCAEQDWRYSRAVVFLDPYGMQVSWGLIEALARTKAIDLWFLFPLGVAVNRLLTRKAPPTGAWADALTRILGTDAWKSAFYVQKNQLTLFGEEESCEKEADFERIGRFFVERLKTVFYGVAENPLPLRNSRHNPLYLLCFASGNPKGSQTAIKIAQHILST
>NC_009767.1|WP_049768777.1|401567_401885_-|hypothetical-protein
MDISPDALIFQVSLFEKDESMLVEAAKQDRAAFGVLYYRYASRVYKYLRTRLDNDDDAADLTQQVFYRLSQRSQNTKIAESLFLHDCFVLPLMLSLMLDVASTQR
>NC_009767.1|WP_041330131.1|400641_401256_-|hypothetical-protein
MTLKPTLFTIIIGLLLVISALVNTSESRLSISNAQEQGEHCVVYAEATAPGSSAAPVAWRGCYPTFEAIAVATDGRVHLPPSASPDDLSDDMLHSQSATDVHPAQSSFVLTIEYDDTNYRGASLTTTGMMPCPSDGSAFLLPSLGAWDNRIESVRLYSNCNRAFHYENESYGGNYGDYRSDTPDMTSMRNQASSLKICQNCLAR
>NC_009767.1|WP_011997859.1|396027_399267_+|isoleucine--tRNA-ligase
MAFQPVDTRVNFPRLEEQILDLWQRKQIVERSLESGDKPFVFYEGPPTANGRPGIHHAISRIFKDVICRYRAMQGYKIIGRREGWDTHGLPVEIEVEKKLGFSGKPDIEKYGVAEFNAQCRQSVWEYIQDWRQFTRRIAYWVSEDAYITYENDYIESLWWIFRQLWDRGLLFRDYKVSMHCPRCGTSLSDHEVSLGFKDDVDDPSVWVKFRVRETSHEALRGASFVAWTTTPWTLPANVALAVKPDAAYVVVSHDGERFVLAEALLHSVLGDGVTVERTFQGADLVGTRYENLFDGVPAPGDTVDWSRAYTVVADDFVSLEDGTGIVHIAPAYGDLEIGRKYGLPTLFSVDLAGNVLPEFASLGFAGKFFKQADPDITRNLKARGLLLRSGRVKHSYPFCWRCDTPLLYYAKRSWYIRTTAMKDRLVANNLLIHWVPEHIRDGRFGNWLENNIDWAVSRERYWGTPIPIWMAEDGYAECIGSLAELEQKVGRTLKDLELHRPYVDEITWVDPQHGLMRRIPDVADCWFDSGAMPIAQWHYPMENTEIYELAKQADYICEAVDQTRGWFYTLHAISTLLFDRPAFKNVICLGHILDAEGQKMSKSRGNVVDPWTVMNEHGADALRWYLFTAAPPGSPRRFSAGLVAESLRKFLLTLWNTYAFFATYANLDGWTPTKDGVDQHLDPATLVPIDRWALARLNSLVRTVTDAFEAYDVTTAARAIEDFVDELSNWYVRRNRRRFWKSEHDRDKQAAYATLYTCLLTVAKLAAPFVPFVAEAIYRNLVGLEGHEGQTDTPESVHLVAWPQVNEALLEERLVADTEVLLKAVSVGRAARRAAGIKVRQPLRELWVRALTPTALEGLRRFEAELRDELNVKAVRYLDSTATLVEYRLKPNLRLVGRKYGKLVPAITAALRDLTGDAARAAAQAVEAGETITLTLEGQAIDLLPEEVLVESSSPEGYAVAEDGGVLVALDTTLTPELTMEGLARELVRNIQDARKDAGFAISDRIIVFLGGADGDAAVEAMLRAWGDYVREETLADDLRLCAPPDHVHTTSLELDEGRTLTIGVSRGGTETRPHGYV
>NC_009767.1|WP_011997858.1|394719_395586_+|sulfurtransferase
MTTDHLVSLDWLAERLNDPDIRIADLRWYLLEPGRGRTEYLEAHIPGAVYLDIDTDLSAPPFQGPGRHPIPAPEAFAAVASRTGIGSKTHVIAYDSVGGAYAARLWWLLRYFGHERVSLLDGGWPAWVAAGLPVESGEVTPPPTMFIPHPNRAMVVDADTVDVLRRDPRVLILDARAAERYQGIAEPLDPRAGHIPGAVSAPYADNVDADGRMRSVEELRARYAALGADRAETIVCYCGSGVTAAHTILALARAGWKNTLLYEGSWSDWSRDPARPAATGSEPWGGEG
>NC_009767.1|WP_011997857.1|392796_394467_+|peptide-ABC-transporter-substrate-binding-protein
MARRIRWQILIAAISSLTVLLLMSYLALTRASVARPLTGGDYVEGVVGAPLHLNPLLVDPAADPVAADLHRLIFEGLTRPGPDGLPMPALAESWTVDDSGTVYTFTLRSGVAWHDGAPVTVDDVLFTMRAVQGPAFAGDQNVAAFWRTVLVDRAGERSVSFRLDSPFAPFLRLTGFPILPAHLLRDTPPEQWEAMAFNRLPVGAGPYRLIERDDQHALLRANSSYFGSPPFIETIELRFFRTEQDALAALTRGDIQGLAFLSTGALADVNLPRNVVRRQALLDACTVLTFNLRDGPLTEIGVRRALAMALDKDALIAGVLNGQVARLDTPILHGWWAEAPDVQWYEPDPARAVSALDALGYVAGADGIRARNGQRLAFTLLTDSSPKRRAVAEEIARQWSAIGVRIVIEQVESGDLQRRLETHDFTMALHGWQRLGSDPDVFELWHSSQAERGRNYTGLTDADIDELLYNARKIYDIADRAALYNEFQQRWVDLAPGIMLYQPFLIHATVADLGSIIAVAPDEAVSPRLIMGREGRFADVNRWYLRSDREIRGDLR
>NC_009767.1|WP_011997856.1|392462_392672_+|preprotein-translocase-subunit-SecG
MEIALYTALIIVSAALTFLVVVQGRTAGLQQRDTIYRTKRGIEKTMHQATIALAVVFLLLALIASLPIW
>NC_009767.1|WP_011997855.1|391240_392392_+|molybdopterin-synthase-adenylyltransferase-MoeB
MILSSLSNEEIRRYSRHLILPEFGMEGQRKLKQGSVLLIGTGGLGSPLALYLAAAGVGHIGLVDFDIVDESNLQRQIIHGTSTLGIRKTESAKMRLRDLNPHIDIATYETQITSENAFDLMRPYDVIVDGTDNFPTRYLTNDACVMLGKPNVYGSIFRFEGQATVFSPKHGGPCYRCLYPEPPPPGLVPSCAEGGVLGVLPGVIGTIQATEAIKLLTGIGEPLIGRLLLYDALAMRFRELKLRRNPDCPVCGDHPTVTELIDYQQFCGISPEEAHRDATIEITPAEVAEWLQSDHPPFLLDVREANEWEICHLPGAVRISVNELAERMNELDSAVEMVVYCRSGVRSARAVDLLRQAGFRKVKNLAGGILRWADEVDPGVPKY
>NC_009767.1|WP_011997854.1|390935_391217_+|MoaD/ThiS-family-protein
MAVTVTIPTALRQYTGGNASVALATGSVGQILAALSEQYPQLGKHLYNEQGTLRSFVNIYVGDEDIRHLQGIETPVPDGETVSIIPAIAGGVR
>NC_009767.1|WP_011997853.1|390241_390718_+|M67-family-metallopeptidase
MMIVLPEHMRIAIARHAEETYPDECVGLLLGRIDGSRMEVEDVFPAPNRWTVDVGLTPTDADHSLRDRFYLDPRDYLRAERMARERNLDVVGCYHSHPDHPAIPSPRDLTGAQGIGGGSQFAFLIQSVREGRAAELTAWTLDDAGMRFVPEETVERLR
>NC_009767.1|WP_011997865.1|406537_407269_-|metallophosphoesterase
MRGMLWSISDLHLSFARPKPMDIFGSRWKNHPDRIAAAWRARVKPDDIVLLAGDTSWAMKLQDALVDLEWIAALPGRKIISRGNHDYWWSSERTNRVRRSMPPGIDILEASAIDLGDVVVCATRGWNAPETPGFQESADRPYYERELARLDRALAEAQRLAEGKRPIVVMIHFPPFAARRPTEFARRIAAAKASACVYGHLHRPEDWATATQGVVDGVYYQLTSCDYLGFGPVAVRGVRAAEG
>NC_009767.1|WP_011997866.1|407297_408014_-|phosphoadenylyl-sulfate-reductase
MENDFERMSSWSPEELQRLNEQFETQPPEALLTWAAHMFCPRVALTCSFSGPSGMVLLDMVARLNLDIPVVFLDTDLLFPETYELVAIAERRYGIPIRRRRPVLSVEEQDRQEGPQLYARDPDRCCQVRKVAPLAETLRTYDAWISGIRRDQSDTRATIDLLEWNTRYNLVKISPLAFWTDRQVWAYIHHHQVPYNPLLDRGYPSIGCLPCTRPADASDPRAGRWVGFAKTECGLHTP
>NC_009767.1|WP_011997868.1|409768_410287_-|adenine-phosphoribosyltransferase
MTINLTDLIRNVPDFPVPGIQFKDITPLLQHGAAFKQVIDTLAARYEGRSLDAVVGVESRGFIFSAPLAYRLGIGLVPIRKPGKLPWETFAVEYDLEYGSNKLEMHRDALDPGARVVVIDDVLATGGTVAAACQLVETAGAVVEEVACLIELTLLKGRERLANYSFFSMLQY
>NC_009767.1|WP_011997869.1|410673_411510_-|pantoate--beta-alanine-ligase
MRVIATIGEFRAARAAMHGAVGLVPTMGYLHEGHLSLVRRARAENDHVIVTIFVNPTQFGPSEDLSRYPRDLPRDLALLEAEKIDVVFAPNVAEMYPPGFGTFVDVGPIAAPLEGAARPGHFRGVATVVCKLFNITTPHRAYFGQKDAQQTLVIRRMTLDLNLPVEIIVCPIVREPDGLAMSSRNVYLNPKERRAATVLFRALQAVQERFRAGERNGDALRAAMRAVIDAEPLAHPDYVSIADLDDLHELDRVTSRALASLAVRIGTTRLIDNCILEA
>NC_009767.1|WP_011997870.1|411516_412353_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MRKTITDIQQMKVRGEPIAMLTAYDAVTAALFDAAGVPMLLVGDSLGDNVLGFGSTIPVTIDDMVRHTAAVARGAQSALIVADMPFLTYATLEMAVVAARRLMQEGGAQAVKLEGGQAMTPIVRRLVECGVPVMGHLGYTPQSAHVFGKVRVQGRSVAAARRLIEDALALESAGAFALVLELVPAPLAAAITERLRIPTIGIGAGPHCDGQVQVSTDMLGLRDDFKPRHARRFADLAPIIRNAAAAYIAAVGERSFPADEHSSRMDETVLREALEGLS
>NC_009767.1|WP_011997871.1|412428_412797_-|hypothetical-protein
MASRTEEMVRHLKALQMNTPDIEASAVVSVDVLIMASALPADVEEDRVSAMSAAMLSLGERIANELKRGQLDQVFVRGEEGYVVLVSIGDEAVLTALAASRAKLGLVFLEMKRTANELLSLV
>NC_009767.1|WP_011997873.1|416184_417195_-|MBL-fold-metallo-hydrolase
MSPEPITRYDTSGNIRIYRMPLRVFPGMSANVYVVIAGDYAALIDTGSGLGESDADLRAAFAALRSDWNERLTWTDLRRIIITHAHIDHYGGLTALRTLTDAPIAVHELDRRVLTHHEERFVMARRALAAFLRRAGVSPAKHAMLLQLYGWSKNLFRSVDVATTFREGDMIDDLFRVYHSPGHCPGQVCLHIGDVLLSADHVLPQTSIFLPPESITLSTGLDHYLRALRAIDALSGIRLTLGGHGAPIDDLHGWIERIIGAQEQRLDQVRALCSEPHTIAELTAALYPAAAGYEELLALQKAGAYVEYLDMRGELTIANLADVDLDESAAPRYWRG
>NC_009767.1|WP_011997874.1|417184_420766_-|AAA-family-ATPase
MEKSLRIELFGTLTVLVDGHPVPDSAWRSRQERRLLAILAAARGRLIAADRLYEWLWPGSDHASAAVNLRSAISSLRRLLEPEADRASHRYILTRSGGYAWNMESGAWIDVDAFLSLTEPTGTDDSVAAKREAERLERAVALYRGDFLEEEQDLAWVIMERERLRARYLDALRRLAEIKLDRGDPTAAMALAGRGIAVASLAEPLWRILMLAQARAGDTAGALQSYERYRHLLDHELGAVPSPQTQALHMAILRGDLGVERRIGSPPLQGDHNERLRSTDVRSAGGPLQAIRLPRSASTPIVGRQEELALLRRWLADLDQRTGGIVTIVGEAGIGKTRLLTETLRIAADRGALTLELRATSLDQGLPFAAVSEVLRSLVRNAPEQRLRRLPQFALAQIADLFPALRERLPDLPALPDVPPDERRTRQIEGLCELALDLAHTLPLVIALDDAQWADEATLATIGRLARQSSRRSLLIMLAYRADELSDNPSLHRLLRTLGRDMLLRPLVLNRLDAAAVAELLATLAGVETGRVARLAPQLAISTGGNPLAIMVTVQALLESRGAASLAALLPDLEAGAPFPDPTEAPQMRELVRTRLDRLPATARNLAEHLALINRPASLDMIERLGGTDALEAAQILLERQILVEDDDAHLAFNHDLVRSITAATLSSPRRRLLHHRIGEAMAALEGHLPERAAEIAYHFRQAGRTADRETLRYATDAGDHARRAFGYRDALRHYDAALEAGERLGDEAPVEVMQRAFAGRLLTCETLLDWHGLEETSARYERWAMQRSVTPPTLVAPRRLVLLRALMGDLAGAAAISAAHTARAQKGGCVEPLPSIADMLQRTALILQPDTLSVVSERSRGEARKRRMGIGDRRSLGADIVSRETVESEIQSADLRSMRDADAAWHAFPSFMLAHPVPGNPAEELPELLGADEAAAALFQIGWAALMQGLLRSARPCLIRSYALAVETGQAPAAVVSALQLAHLNALTGKPDETAIWLERSLETSARASEAAWASIWPRIHQGFLWLIDDRLAQAEERFVDMAARLAGAPAFQSHRASIAVGMGMIALARGDLTGADSYFHEALRASQQLYGFIYVSAHHGLARLAALRNDLPRARDVLLHALRYSAQRALLPEYVRTVIEVARIERDFGDPIPVLPYLRIAVRLARDAGLAPLASAASALSTRLEESHRVP
>NC_009767.1|WP_041331408.1|421179_423015_+|translational-GTPase-TypA
MIRRNDIRNIAIIAHVDHGKTTLVDGLLRQGRIFRENQPVAERVLDSNDLERERGITIMAKNTAVTYRGVKINIVDTPGHADFGGEVERVMNMVDGVLLLVDAVDGPMPQTRFVLRKALQAGHRAIVVVNKIDRPNARPNHVVNETFDLFIELGATDEQAEFATIYTNALKGVAGRSPLKIHDSLEPLFDAILDQIPGPQVDPDGPAQLLVTNTVYDDYKGKILIGRLRRGTLRKGQAVARIARDGSVIPAKVSQLFVFNGLDRNEIEEVAAGDIIAIAGIGDASIGDTIADAQCPEALPSIAVEEPTVRMTFSVNTSPFAGREGTHVTSRTLRERLYQELERDVALRVADTDSPDAFIVSGRGELHLTILIETMRREGYEFQVSRPEVIFKEIDGVKYEPIEQVELEVAEPYQGAVIELMGQRRGQMRDMSIRDGGSVHMIFHVPTRGLLGFRQTFLTATRGEGVMNSLFIGYEPLAGEIVTRSNGSLVASERGVATAYALNQAQERGTLFITPGTEVYEGMIVGQHIRERDLEVNVCRRKHLTNIRSSTAEEGIRLETPRVLSLDDAIEYISDDELVEVTPKSIRLRKRLLTLTERQREQKRRETGVKS
>NC_009767.1|WP_011997876.1|423168_424647_+|hypothetical-protein
MHYLYLRLALIVLLLAAGASSAAAAPAAEEGSTTAVFFRETQNWIAPPFYQFWSKNGGLPIFGYPLAPTDLMTSPDDGNTYATQIFERNRLEYHPENPEPYRVQLGRLGVEVLQKQGRNWQDFPKGTPKRGCDFFPETGHTLCEPFRSYWRRYGLDLGFRGVTRAESIALFGLPISEPMMETNADGATVLTQWFERARFEYHPNNPPQYRVLLGLLGKELYGPYRPGVASVSGRVVERGMPFWDAVSNSGMQIKQASVGIEGPYYPEDHPLSGVTEVVMTSQGEISVSTEGWFTTLVDIQPDNSFAFSDFIPTLPGAFMMLGPGRIDGVCADGKEADFLSYGSVLFGSGQDLDFALEGGQAANFGDFRVNVICLSPPEPDARYHDAAFAAVQCAAGRPLTRDPEFDAFAVEAQRAHRNERVEAMVREHPRIRGITFLGVTFDGAPSSDPCIFGGKNFRDIRLLFEQATTIGVAVFPSSSANYPVGTLVIVRD

Crispr_ID: NC_009767_8

• CRISPR_ID: NC_009767_8
• CRISPR_location: 508413-508516
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_8

Consensus_repeat	Method
CCGTCAGGCGTTTTCTTCTCAAGCATTCAAAG	CRISPRCasFinder

spacers of NC_009767_8

>8.1|508445|40|NC_009767|CRISPRCasFinder
CAGAAGATTGACCGTGAGACGCTGGAGCAGCGCCGACAGG

CRISPR arrays and Neighbor proteins around NC_009767_8

CRISPR arrays

The CRISPR arrays of NC_009767_8

>merge|NC_009767|8|508413-508516|CRISPRCasFinder
CCGTCAGGCGTTTTCTTCTCAAGCATTCAAAGCAGAAGATTGACCGTGAGACGCTGGAGCAGCGCCGACAGGCCGTCAGGCGTTTTCTTCTCAAGCATTCAAAG

>NC_009767|8|8|508413-508516|CRISPRCasFinder
CCGTCAGGCGTTTTCTTCTCAAGCATTCAAAG	CAGAAGATTGACCGTGAGACGCTGGAGCAGCGCCGACAGG
CCGTCAGGCGTTTTCTTCTCAAGCATTCAAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_011997941.1|512029_513181_-|transposase	unknown	unknown	gnl|CDD|376573
NC_009767.1|WP_157042510.1|511313_512036_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997933.1|501586_504673_+|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|225100
NC_009767.1|WP_011997927.1|492778_494146_-|glucose-dehydrogenase	unknown	unknown	gnl|CDD|369642
NC_009767.1|WP_011997939.1|510745_511357_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997945.1|517803_518055_+|UPF0175-family-protein	unknown	unknown	gnl|CDD|377095
NC_009767.1|WP_011997932.1|500681_501353_+|hypothetical-protein	unknown	unknown	gnl|CDD|380093
NC_009767.1|WP_011997937.1|509395_509869_+|SgcJ/EcaC-family-oxidoreductase	unknown	unknown	gnl|CDD|274053
NC_009767.1|WP_011997928.1|494482_495436_+|polyprenyl-synthetase	unknown	unknown	gnl|CDD|173833
NC_009767.1|WP_011997935.1|505057_508372_+|type-III-restriction-endonuclease-subunit-R	unknown	unknown	gnl|CDD|368155
NC_009767.1|WP_011997930.1|498302_499589_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|366721
NC_009767.1|WP_011997944.1|516037_517000_+|type-II-restriction-endonuclease-AvaI	unknown	unknown	gnl|CDD|370354
NC_009767.1|WP_011997926.1|491133_492711_-|PucR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|226355
NC_009767.1|WP_011997931.1|499808_500567_+|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|224007
NC_009767.1|WP_011997938.1|509930_510737_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042511.1|513692_513932_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997943.1|514607_516038_+|restriction-endonuclease-subunit-M	unknown	unknown	gnl|CDD|223931
NC_009767.1|WP_011997929.1|495458_497666_+|alpha-amylase	unknown	unknown	gnl|CDD|200452
NC_009767.1|WP_157042509.1|508773_509085_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042761.1|504698_505061_+|four-helix-bundle-protein	unknown	unknown	gnl|CDD|274132

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_011997941.1|512029_513181_-|transposase	gnl|CDD|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	6.15043e-06
NC_009767.1|WP_011997933.1|501586_504673_+|site-specific-DNA-methyltransferase	gnl|CDD|225100	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair].	1.06258e-18
NC_009767.1|WP_011997927.1|492778_494146_-|glucose-dehydrogenase	gnl|CDD|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	2.50321e-43
NC_009767.1|WP_011997945.1|517803_518055_+|UPF0175-family-protein	gnl|CDD|377095	pfam03683, UPF0175, Uncharacterized protein family (UPF0175). This family contains small proteins of unknown function.	5.36469e-22
NC_009767.1|WP_011997932.1|500681_501353_+|hypothetical-protein	gnl|CDD|380093	pfam18029, Glyoxalase_6, Glyoxalase-like domain. This entry comprises a diverse set of domains related to the Glyoxalase domain. The exact specificity of these proteins is uncertain.	3.15211e-11
NC_009767.1|WP_011997937.1|509395_509869_+|SgcJ/EcaC-family-oxidoreductase	gnl|CDD|274053	TIGR02246, hypothetical_protein, conserved hypothetical protein. This family consists of uncharacterized proteins found in a number of genera and species, including Streptomyces, Xanthomonas, Oceanobacillus iheyensis, Caulobacter crescentus CB15, and Xylella fastidiosa. The function is unknown.	6.70787e-17
NC_009767.1|WP_011997928.1|494482_495436_+|polyprenyl-synthetase	gnl|CDD|173833	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX)D) located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational changes that close the active site to solvent, protecting and stabilizing reactive carbocation intermediates. Farnesyl diphosphate synthases produce the precursors of steroids, cholesterol, sesquiterpenes, farnsylated proteins, heme, and vitamin K12; and geranylgeranyl diphosphate and longer chain synthases produce the precursors of carotenoids, retinoids, diterpenes, geranylgeranylated chlorophylls, ubiquinone, and archaeal ether linked lipids. Isoprenyl diphosphate synthases are widely distributed among archaea, bacteria, and eukareya.	2.70546e-38
NC_009767.1|WP_011997935.1|505057_508372_+|type-III-restriction-endonuclease-subunit-R	gnl|CDD|368155	pfam04851, ResIII, Type III restriction enzyme, res subunit.	2.66282e-07
NC_009767.1|WP_011997930.1|498302_499589_-|FAD-dependent-oxidoreductase	gnl|CDD|366721	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.	9.09872e-48
NC_009767.1|WP_011997926.1|491133_492711_-|PucR-family-transcriptional-regulator	gnl|CDD|226355	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms].	1.5419e-27
NC_009767.1|WP_011997931.1|499808_500567_+|sugar-phosphate-isomerase/epimerase	gnl|CDD|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	4.97962e-20
NC_009767.1|WP_011997943.1|514607_516038_+|restriction-endonuclease-subunit-M	gnl|CDD|223931	COG0863, COG0863, DNA modification methylase [DNA replication, recombination, and repair].	0.000995255
NC_009767.1|WP_011997929.1|495458_497666_+|alpha-amylase	gnl|CDD|200452	cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes firmicutes, bacteroidetes, and proteobacteria. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	1.89356e-29
NC_009767.1|WP_157042761.1|504698_505061_+|four-helix-bundle-protein	gnl|CDD|274132	TIGR02436, S23_ribosomal_protein, four helix bundle protein. This family describes a protein of unknown function whose structure is a bundle of four long alpha helices. Some of the first members of this family were found encoded in the (atypically large) intervening sequence (IVS) of Leptospira 23S RNA, a region often present in the rRNA gene and removed during rRNA processing without re-ligation. However, this location is not conserved, and naming this protein as a 23S RNA protein is both confusing and inaccurate.	1.06251e-24
NC_009767.1|WP_011997944.1|516037_517000_+|type-II-restriction-endonuclease-AvaI	gnl|CDD|370354	pfam09194, Endonuc-BsobI, Restriction endonuclease BsobI. Members of this family of prokaryotic restriction endonucleases recognize the double-stranded sequence CYCGRG (where Y = T/C, and R = A/G) and cleave after C-1. They catalyze the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.	0

Protein sequences

>NC_009767.1|WP_011997935.1|505057_508372_+|type-III-restriction-endonuclease-subunit-R
MNTASSFTVHHSSFQQLENRLVLLAWLNSLFGYTSNRALLEDCKSVDEGYGPDGRSFLYHHLVARGSQVKISNDDLARYDENIRLHLEKINRGRIERITLRYFQYLAALYTEIYLDRLFNHRGGADGRPPLLADLNAFATMRNDERGMRNDERGMRNDERGMRNDERGMRNDERGMQRDSSLIIQDSDLTKLAYWMATGSGKTLILHLNYHQFLHYNREPIDNILLITPNEGLSEQHLAELAASGIPARRFDVNASSLWTGGRDIVQVIEITKLVEEKRGGGVSVPVEAFEGRNLIFVDEGHKGAGGEAWRKYREALGATGFTLEYSATFGQALSAARNDPLTAEYGKSILFDYSYKYFYSDGFGKDFRILNLRDETRSDQTEMLLMGNLLSFYEQVRLYEEQTDALRPYNLEKPLWVFVGSTVNAVYTENKQPRSDVLTVVRFLHHALSDRDWAIKTIKAVLGGKTGLVSPDGQDVFAGRFGYLRKTGATPEQLYDDILRRIFNAPAGGGLHLCEIKSSPGELGLKAANAGDYFGLIYIGDTSAFKKLAEEEAGDIALEGDAIAHSLFERINRPDSGLHVLIGAKKFMEGWNSWRVASMGLLNIGRQEGSQIIQLFGRGVRLKGKAMSLKRSAALEGSHPPHLRLLETLNIFAVRANYMAQFRDYLEREGVEVEPPIELPLFVWANEQFLKQGLVVPRPPEVRDFTAETALLLEPDSRIRVHVDLSVKVQAIESTRLGLHTADVRGGRAQAIPAESLDWVDWQQAYLDVLAYKARKGWSNLVIQPETLRQIVELKDKGVPVCTVIADERVIRPQSFRDRALLQQVVTQLLCRYVDRLYQTRREQWDEQTMVYRPLDENDPNLGFRPPGVNEKRAGYVIRVPRSEQQLVEAVRTLLEEQERLYQQENAGLPRIHFDRHLYQPLLVDMPGKAQIAPPGLKESEARFVCDLRDYWDAEKNNSLEGKEVFLLRNLSRGYGIGFFEERGFYPDFILWVVDQATKAQRIVFIEPHGMVHAKAYIHDEKARLHERLPVLADEIGKRSGRTDITLDAFIVSATSYDDLHQHYDDGTWDRARFAERHILFQERGQNYDYLRILFGQLTSAST
>NC_009767.1|WP_157042761.1|504698_505061_+|four-helix-bundle-protein
MEQKRDILERTKAFALRIIRLYSALPQKTEAQVLGKQVLRSGTSVGAQLREGKRSRSDVEMISKTESALQELEETAYWLELLAESGIVKAELLADLQRETDELTAILVTSVKTLKSRKAK
>NC_009767.1|WP_011997933.1|501586_504673_+|site-specific-DNA-methyltransferase
MKTITLEKFQSLLRELFQFDCADLDFGIYRIMNLKRAVIERFIAEDLPKEIAEELQRGAFAEQERAQQTLKEVRQKLLDVLGEDALDANGNLAEKYRETRAGREYLEAQAKAAGGRSAEALEADVYNRLYAFFSRYWQEGDFISKRRYSKKERYAIPYNGEEVYLYWANHDQYYVKTGEYFTDYTYQAPNGVTVQFKLKQADVEQNNVKGEKRFFLPRLDEISWDEPARLLTIPFEFRPLTEQENIAFGQKNQQESIIAKAVAEIPKRVQAADALAALLAERRKTEKGETVTCLEHHLRQYTRRNTSDFFIHKDLRGFLSRELDFYLKNEVLNLDEMEAAGEGLAEGWFQLMRLIKRIGLKIVEFLAQIEDFQKALWEKKKFVTETFYVVAVGNIPEAFYPEVAANDPQWEEWEQLGMVNAECRKMTAEERSSFLMHHSSLPLDTRHFPPEFTDRLLASFQNLDEMTDGLLVHSENWQALNLLQEKYRERVKCIYIDPPYNTGNDEFLYKDSYQHSCWLSMMSQRLSLSSSYLESQGCLFISIDDIEFPALRYMLQHLFREDTIISELVWKKRSGGDMTAGRGARLSVDHDYVVAALTEGASGFSGLPISEEDYTNPDNDPDGPWTTGDLTCNKTAEERPNLFYDLIDPTTGNVFKCNPKRVWAYEPEKMKQFIERTVNGRWLPKVLFPSDPTKRPKLKVFLKERERATRLFSSWMEEVPLNAKATRLLDNILGQRVLLYPKPVELIESLARQTLMNEADVVLDYFAGSGTTGHAVINLNRKDGGRRKFILVEMAQYFDTVLLPRIKKVTFTPEWKDGKPRRMATAEEAARSPRIVKVIRLESYEDALNNLTFDEESGQQALDLFGQEYLLSYMLKWETRRSETLLNVAQLQSPFSYKLHIHRDGETREQPVDLPETFAYLLGLDVQTRKVYRNDERRMMNDESHHSSFITHHSYLVYRGALRDGRSVAVIWRETKGWTTEDYRRDAAFVSEQKLAEGADEVWVNGDALIPGARSLDPIFKERMMNAE
>NC_009767.1|WP_011997932.1|500681_501353_+|hypothetical-protein
MSEQGWQEFLSAEGIDDWVVLHGGATAVFRVGSLSEAVRLAEAIAGITGLEDSGVVMTIANDHLTVRLTRDIWRLEPRHIELARAISAIAQEHHVPADRAAVQEVQVAIAAKRDEIDVNFWRAVLGYVPAADDNAVDPLGHGSTVWMQELDESKPLRHAMHIDVSVAREQAMVRLQAALAAGGRIVDDSHAPSHWTLADRAGNRVCIAAWPDGSTRRLSSGSE
>NC_009767.1|WP_011997931.1|499808_500567_+|sugar-phosphate-isomerase/epimerase
MATNPLSLQMYTLRDQAATDYVGTLRKVKEIGYGAVEVAGVGGMSAAALRQELDAIGLMVSGAHVPIQMLESQLNAIIADMQTLGAPYLICPWMPPERRRSADDYRALARILNGIGAAVADAGLTFCYHHHDFELHLLGDTTGLHLLLHECDPRAVAFEIDVYWSAYAGVDPVQLINEFAGRAPLIHLKDMAPGSRTFAEVGHGTLDIPAILSAARTAGAQWFVVEQDVCQRPPLESVRMSYEYLKGLMSDK
>NC_009767.1|WP_011997930.1|498302_499589_-|FAD-dependent-oxidoreductase
MHVLIIGAGLAGLTCGRILDSLGVRVTLVEASDGIGGRVRSDYADGFTFDRGFQVLFEAYPAARRHLDLDALHLRRFDPGAIICLAGKRFVLTDPLRDQAAALDAALTPIIPPLDKLRVLLLAQRLRRQLIDEVLAGDDETTLAYLRRSGFSEQTINHFFRPFYGGIFLDRSLRTSAKCFRFDFKMLSEGAAALPAHGMGAIAGQLGDALLERGLIRLHTPVAELITNNGRVTGARLASGEELFADAVVVATPAPEAARLSSLPMPQGALQTITLYFGGSQPVYRGRKIALNAAPDALINNAQMISNVAPEYAPTGRHLLSATVLGASPLSDDDLFRAALADLRRMFAGDADALAALEGYQPLRVYRVAYAQFPQAPGIHPLLPDNRSGRPGLYFAGEFTEASSLNAAMISGEKCAAAVIEERQASRF
>NC_009767.1|WP_011997929.1|495458_497666_+|alpha-amylase
MAVYTVRSTRHTLTVTLAELELEFSLDDGGLRALRRPDGQDVIGRGTPHAGIDVSLADTGWLTERSFARYLNHTLFNIPGGVEIVLVIGLGPLKIYDRYRVIGSLIARRISLENTGEDELALCGVRLAISGACVGAPERCRFEAPANVVRPRMPIATLRSDVRQGHWSDATTLETPAFALAPADAHGVLALHNDMLGETLACWYADTSHPARPRVEGDGNSVTLLHEIRLAERLPIEVALSVGVQMLLLERAPWHEALPRIRRMMPQRRIDVSPPSWLADTAIFVTHPMHYGDVAGLIDALDAIRRLGCATICLLPVHDIAAPHRHALEWSPMRPEDLYALRSFATLDASIGGIEGLRRVVAAAHARSMQVMIDLPLSGCAADSPYVYHHPEWFCLDQTGQFIRFSGEVDTLYFDWRNADVRSLAISEALALMEQTGIDGFRVLVARDVPPGWPLGSAFSGSSSMGVTRLIEELYAAIRQHYPDAALMTDLAGPLLASSRDLLIDQAAHHMFTQLAIGRLSVPEMQHWLADVLAIGDPGTLRACFTESHHSCVSNPLAEVLRGSRAARMILAGMVGCGYVPMIRAGQEHDQADREFIAQLLNARTRSIALRRGTVEPDGARCNDPAIFVMLRRHEEECVVTLLNASPMRRWVTLELPRSDVPEGDYLVSDLLNEPLIDGAPDVLLQHGDLTAFPVALGPFAARFLALRSAPAPVLHTSGGHIQESGNPSPHPPDG
>NC_009767.1|WP_011997928.1|494482_495436_+|polyprenyl-synthetase
MMPLMPLPVPDEIVGDLAKVEQVIHARMQGRPIVAQTASAALRGMEKPYLRAALVVLAARLGRYDARRVIHAAAAAELIHFATAVHDNLINEAARRRGQPIGDQRWNGDVALMSGDYLLALAASEMALAPDARIISMYSRVVMTFCEGRLAPVTAVAPLDQALAQHEYVVESRTAALFETAARVGVVCGGSDDTLSNTLGRFGRELGMAMHIAAEVRDYEIDGPYAGHDLRAGRITLPLIYAVDAGGGADLAAVVDQHAPDTHYLTAAIDQVRRLGVPPARARMRDHAQRAMDALAFVPPGDIRNALGALADRVSHM
>NC_009767.1|WP_011997927.1|492778_494146_-|glucose-dehydrogenase
MRFILILIVLAALTGCGMRLNSAPANERPVGTLIPTSATTPAPAAPVATAVAGTPAQPPAAPTSVPTQPPPATPESASTQPAAPTSVPTQPLPAPAQPEPPTASQMPQIALQQIVDGFDRPLHITHAGDGSGRLFVVEKVGRIRIVRNGQALPEPFLDITDRVGSRANEQGLLSVAFHPRYRENGWLFVNYTDTEGNTVVSRFSAEGDRADPSSEEVALTIEQPFANHNGGLIVFGPDGMLYVGMGDGGSAGDPLGAGQDRWTLLGKILRINVDTLPYTIPPDNPWADGSGGRQEVWILGVRNPWRFSFDRATGDLFVADVGQNRLEEVHMLPAGKSAGANLGWNIMEGNECFRRNDCDRRALDLPIDVYPHSLGCSVTGGHVYRGAAFPALQGVYVFGDFCSGRIWGLRPSASGWERTELWQSNIQIAAFGEDEAGELYVAGYNNGVLYRIVVE
>NC_009767.1|WP_011997926.1|491133_492711_-|PucR-family-transcriptional-regulator
MPPVTVQDVVRLALPEGVVVAAGSAGLSHQVSWVATPRATPPVFTNLRGGEFVLVATSALHALDERLTLANLAERLAQVPIAAIAVQGDIPDQARATAETLRLPLLHLPDASDIREVEREVQRLISDYDAQIERRAAQLGHVLTQRSLAGAGVNGLLDTLAERTGRSLAFYSPTGEVRALRARGPARVALQTLQPRGTGATTHLGQQIWVQQIGQIASGDAAGRNFGYLALCGDTLDDWDRLAAHQGASALALELAKEQAVLAAEERLRGDFVQAVLVGAAADDKTLVQRGRELGYDLRQPHVALLCGVANGDDRAIARLAGALSAALSALGVAAPLMRRIDDVLCYIPAVSRGRRAHEIADLLHARLTDDIPGVLVAIGREAPALTHWSRSLREAEQALLIGRELLGNGRVLDFGDLGVYRLLLLLRESPELWEFYRTTLATLVDYDRDQHGELLKTLEAFFDHNGNLARTAEALHIHRNTLLYRLTRIKEISGRDPDVAEDRLALWLALKAHRVLKTISEPVT
>NC_009767.1|WP_157042509.1|508773_509085_-|hypothetical-protein
MTTLYNRLALWQHPKLTNFLKWGSAVAEAKPKPNLTKQDSLQDCLTDKKNLPDANRPADKTRLKRARTIAETVTPILATRHDRKPTLPATRTLANQNLCQPTP
>NC_009767.1|WP_011997937.1|509395_509869_+|SgcJ/EcaC-family-oxidoreductase
MVLKQDWRNYSYKTNCEKDRNHSTAEQQIEQIIHRQQDAWNRGNAAGYSQDCDENLSFTNIVGEMAFGRQAFEAKHAFIFSHIFKGSRLEMDVRRIQFPAPNVALVDIVCTLRDYVALPPGVPPRPDGLLRTCLLEVLMRTEAGWRVVAYHNVDVKV
>NC_009767.1|WP_011997938.1|509930_510737_+|hypothetical-protein
MKKIFVWMILVVALSACGAPANSTPDSAPANSTPDSAPANSTPDSAPIKPTPTEPFSGVINEFESTQTPIANPTPEGDSNECDNPFYPVADEATWFFSISTGENAIHTMSVDDFGKFTITVKGANSTFTIDGQCNSEGVTIMNVPGAQTTYSGEYGSSAVTTVSVSGVSLPNNIAPGQQWTQTITVTTESGTSIIETNYTAVGFENVTVPAGEFYALKIEQDGYVTVFGQKVAMHGFNWYAEGVGPVKGAMDGAPVLELMMYDIPDKK
>NC_009767.1|WP_011997939.1|510745_511357_+|hypothetical-protein
MFERSRVTILLALLALTLSAPACGTSSSPQPAQEETAQSVQATEPPANSSSASGTDPNAVVSCSQILPPDELKNLLINLTPTLTENSYPGGTSCLWSYVNAAGQSSTFFLQVDFSPNAVSLWESTRQSELSNEPSDIVVISIDGLADESYVWSSKTTGLSVVYARIGDKTLIMRYVPQDVIYMANESGIIDMAQRIFERMSGG
>NC_009767.1|WP_157042510.1|511313_512036_+|hypothetical-protein
MTWRSGFSRGCLADKKGTSRINTSSLLFAAAGALIVVIGILGFLPAVQRRNDARRGALIVIGIPGALPATFALLVVFQGRQVSPRGGGSGFDPEPTSDQSVILKPAALPAMCAVPTPAKPPKDMKTYNLHTCTVIFPKTLQVNSYCLNPVTQLGGATVILPQGTSQYVNLPPNCSVVVDEDKLYAKKVACYGASGAKVTLTVQDSCIPADANLPPVVKPSCPPDFKLTVVSPFYGLCLIH
>NC_009767.1|WP_011997941.1|512029_513181_-|transposase
MSACDELHSKMEEPIRPLVDVKHAHHLSNWLWIVCGILLSGSVALSKIALYLPLTAQAEGRIARIRRWLKNVYVDVWQFYRPLLEKVLQGWQAAEAAVILDGVMVFGDRLQIFRLSLRHGSRAIPLSWVVVPGKGLTSVERLRPLIQRAAEFLAPRVGAVVFPADRGFRDVEWAALCLEVGWHYVIRLANNTLITLEDGRRLSIAAPGVPPGEACYWRNAAITQSQDWPANLSVTWTKGARGQAPELLAVMSDRRACNQRLREYGWRMSIEESFRDDKSGGFDLEHTRLQDPQRLERLLLAVAIATLWRHELGEQALHDHSVQAELDPGGKRRELSIFQLGLRFLRRCLLALTTARLPKLRLVLSNLALEPLSPRHLAKEKCQ
>NC_009767.1|WP_157042511.1|513692_513932_-|hypothetical-protein
MIEPEPLLSSGLTEPETELLQTGGAPPKGSNPDFTQHNIPKTAAAKCPDLTDPKLNLQGWALPFNLHGAHGATQHPLNA
>NC_009767.1|WP_011997943.1|514607_516038_+|restriction-endonuclease-subunit-M
MLNPAKVSDILKGEQNIGLSKIAHLDKQLFQRFKSKFAVQPSLSRLLVSFQANKTRPVYRWYKFKEAFSASLVEHLFHKYGITAGRILDPFAGSGTALFAASAMGIDADGIELLPIGHEIITAKRILDAEFTSEDFERLRRWSELRVWEQSETRVPLPELRITQGAYPGKTKEAIEKYIGACQQENSRVQAVLRFALLCVLESISFTRKDGQYLRWDYRSGRTHGKKIFDKGEIPEFGQAISEKLNEILEDASPVHQTTLFPIEKLQGQICLYDGSCLQVLPRLSDNAYDAIMTSPPYCNRYDYTRTYALELALLGTGEQGLLRLRQEMLSCTVENRAKDLLSINPLWTTALAAADEQDLLQAILTYLEDQKAQRALNNNGIPRMVGGYFYEMACVIAECARVLKPNAPLFMVNDNVRYAGASISVDMILSDIAEKLGFQVDHILVLPNGKGNSSQQMGEHGREPLRKCIYVWRKS
>NC_009767.1|WP_011997944.1|516037_517000_+|type-II-restriction-endonuclease-AvaI
MSFPPYRNHLQSSDDLVTSYEATRAGFVALALEKNRRSTPYVAEARALQEAASRAKTPADLLTIKGIEAGLLTAAGLSDKALVHLQPEDKAEAINGLIKNFLEPAGEKFVEELVFRFLLTRGDALGGSMRNIGGVLAQRKLTRAIISTLVIAGISYRWQHSKTKQWVDMTDDDSEIELSLRGLSWENKGEPRTLMYNLTVPLVKNNVDMCVFNLNPDDLQDQDKGYTSAASYIALGELKGGIDPAGADEHWKTARAALDRIREAFSKAQHSPHIFFIGAAIEKKMAVEIWDQLEKGLLTNAANLNDPNQIASVSRWLCTL
>NC_009767.1|WP_011997945.1|517803_518055_+|UPF0175-family-protein
MALQQITIEIPEKVLLAEKTDAESFGREIRMLAAVKLYEMGRLSSGRAAELAGMSRVEFLLNLNRYKVFPFAAELDDLENAHA

Crispr_ID: NC_009767_9

• CRISPR_ID: NC_009767_9
• CRISPR_location: 567479-567590
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_9

Consensus_repeat	Method
GCGGAAGATGCGCCGCCAGATCGCACCCGACCTCAGCGCA	CRISPRCasFinder

spacers of NC_009767_9

>9.1|567519|32|NC_009767|CRISPRCasFinder
TATGCCCAAATCGCTGCGGTGGGGGGGAATTG

CRISPR arrays and Neighbor proteins around NC_009767_9

CRISPR arrays

The CRISPR arrays of NC_009767_9

>merge|NC_009767|9|567479-567590|CRISPRCasFinder
GCGGAAGATGCGCCGCCAGATCGCACCCGACCTCAGCGCATATGCCCAAATCGCTGCGGTGGGGGGGAATTGGCGGAAGATGCGCCGCCAGATCGCACCCGACCTCAGCGCA

>NC_009767|9|9|567479-567590|CRISPRCasFinder
GCGGAAGATGCGCCGCCAGATCGCACCCGACCTCAGCGCA	TATGCCCAAATCGCTGCGGTGGGGGGGAATTG
GCGGAAGATGCGCCGCCAGATCGCACCCGACCTCAGCGCA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_011997987.1|573768_576255_+|hypothetical-protein	unknown	unknown	gnl|CDD|223498
NC_009767.1|WP_011997982.1|564907_565531_+|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase	unknown	unknown	gnl|CDD|319806
NC_009767.1|WP_011997975.1|556163_556598_-|ester-cyclase	unknown	unknown	gnl|CDD|377824
NC_009767.1|WP_011997991.1|581843_583310_+|flippase	unknown	unknown	gnl|CDD|240533
NC_009767.1|WP_011997988.1|576687_578418_+|B12-binding-domain-containing-radical-SAM-protein	unknown	unknown	gnl|CDD|132511
NC_009767.1|WP_011997990.1|580485_581670_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_011997989.1|579058_580228_+|DUF1624-domain-containing-protein	unknown	unknown	gnl|CDD|226034
NC_009767.1|WP_011997981.1|563777_564821_+|GHMP-kinase	unknown	unknown	gnl|CDD|225325
NC_009767.1|WP_011997979.1|562111_562402_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_011997985.1|569441_570686_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133022
NC_009767.1|WP_011997980.1|562600_563551_-|ParA-family-protein	unknown	unknown	gnl|CDD|224113
NC_009767.1|WP_011997978.1|560814_562107_+|adenylosuccinate-synthase	unknown	unknown	gnl|CDD|234904
NC_009767.1|WP_011997984.1|567681_568404_+|acyltransferase	unknown	unknown	gnl|CDD|100053
NC_009767.1|WP_011997974.1|554102_556220_+|DUF2029-domain-containing-protein	unknown	unknown	gnl|CDD|378217
NC_009767.1|WP_041330143.1|584980_585883_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133029
NC_009767.1|WP_011997992.1|583326_584670_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340850
NC_009767.1|WP_041330142.1|570942_572958_+|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	unknown
NC_009767.1|WP_011997973.1|553087_554110_+|fumarylacetoacetate-hydrolase	unknown	unknown	gnl|CDD|376566
NC_009767.1|WP_011997977.1|559624_560470_-|tellurium-resistance-protein-TerC	unknown	unknown	gnl|CDD|274742
NC_009767.1|WP_041331441.1|557443_559621_+|hypothetical-protein	unknown	unknown	gnl|CDD|225942

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_011997987.1|573768_576255_+|hypothetical-protein	gnl|CDD|223498	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism].	1.54384e-05
NC_009767.1|WP_011997982.1|564907_565531_+|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase	gnl|CDD|319806	cd07503, HAD_HisB-N, histidinol phosphate phosphatase and related phosphatases. This family includes the N-terminal domain of the Escherichia coli bifunctional enzyme histidinol-phosphate phosphatase/imidazole-glycerol-phosphate dehydratase, HisB. The N-terminal histidinol-phosphate phosphatase domain catalyzes the dephosphorylation of histidinol phosphate, the eight step of L-histidine biosynthesis. This family also includes Escherichia coli GmhB phosphatase which is highly specific for D-glycero-D-manno-heptose-1,7-bisphosphate, it removes the C(7)phosphate and not the C(1)phosphate, and this is the third essential step of lipopolysaccharide heptose biosynthesis. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.19226e-63
NC_009767.1|WP_011997975.1|556163_556598_-|ester-cyclase	gnl|CDD|377824	pfam07366, SnoaL, SnoaL-like polyketide cyclase. This family includes SnoaL a polyketide cyclase involved in nogalamycin biosynthesis. This family was formerly known as DUF1486. The proteins in this family adopt a distorted alpha-beta barrel fold. Structural data together with site-directed mutagenesis experiments have shown that SnoaL has a different mechanism to that of the classical aldolase for catalyzing intramolecular aldol condensation.	2.87182e-37
NC_009767.1|WP_011997990.1|580485_581670_+|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.4869e-29
NC_009767.1|WP_011997989.1|579058_580228_+|DUF1624-domain-containing-protein	gnl|CDD|226034	COG3503, COG3503, Predicted membrane protein [Function unknown].	1.30324e-13
NC_009767.1|WP_011997981.1|563777_564821_+|GHMP-kinase	gnl|CDD|225325	COG2605, COG2605, Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only].	1.88381e-97
NC_009767.1|WP_011997988.1|576687_578418_+|B12-binding-domain-containing-radical-SAM-protein	gnl|CDD|132511	TIGR03471, HpnJ, hopanoid biosynthesis associated radical SAM protein HpnJ. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0975) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4901) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnJ) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopanoid biosynthesis locus was described consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and another radical SAM enzyme (ZMO0874), HpnH. Although discontinuous in Z. mobilis, we continue the gene symbol sequence with HpnIJKL. One of the well-described hopanoid intermediates is bacteriohopanetetrol. In the conversion from hopene several reactions must occur in the side chain for which a radical mechanism might be reasonable. These include the four (presumably anaerobic) hydroxylations and a methyl shift.	1.40083e-73
NC_009767.1|WP_011997985.1|569441_570686_+|glycosyltransferase-family-2-protein	gnl|CDD|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.92499e-56
NC_009767.1|WP_011997980.1|562600_563551_-|ParA-family-protein	gnl|CDD|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	5.7598e-59
NC_009767.1|WP_011997978.1|560814_562107_+|adenylosuccinate-synthase	gnl|CDD|234904	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.	0
NC_009767.1|WP_011997977.1|559624_560470_-|tellurium-resistance-protein-TerC	gnl|CDD|274742	TIGR03716, R_switched_YkoY, integral membrane protein, YkoY family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains proteins YceF and YkoY from Bacillus subtilis. A transport function is proposed.	1.4332e-51
NC_009767.1|WP_011997974.1|554102_556220_+|DUF2029-domain-containing-protein	gnl|CDD|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	0.000327181
NC_009767.1|WP_041330143.1|584980_585883_+|glycosyltransferase-family-2-protein	gnl|CDD|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	4.12153e-71
NC_009767.1|WP_011997992.1|583326_584670_+|glycosyltransferase-family-4-protein	gnl|CDD|340850	cd03823, GT4_ExpE7-like, glycosyltransferase ExpE7 and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).	1.22251e-53
NC_009767.1|WP_011997991.1|581843_583310_+|flippase	gnl|CDD|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	6.90556e-60
NC_009767.1|WP_011997973.1|553087_554110_+|fumarylacetoacetate-hydrolase	gnl|CDD|376566	pfam01557, FAA_hydrolase, Fumarylacetoacetate (FAA) hydrolase family. This family consists of fumarylacetoacetate (FAA) hydrolase, or fumarylacetoacetate hydrolase (FAH) and it also includes HHDD isomerase/OPET decarboxylase from E. coli strain W. FAA is the last enzyme in the tyrosine catabolic pathway, it hydrolyzes fumarylacetoacetate into fumarate and acetoacetate which then join the citric acid cycle. Mutations in FAA cause type I tyrosinemia in humans this is an inherited disorder mainly affecting the liver leading to liver cirrhosis, hepatocellular carcinoma, renal tubular damages and neurologic crises amongst other symptoms. The enzymatic defect causes the toxic accumulation of phenylalanine/tyrosine catabolites. The E. coli W enzyme HHDD isomerase/OPET decarboxylase contains two copies of this domain and functions in fourth and fifth steps of the homoprotocatechuate pathway; here it decarboxylates OPET to HHDD and isomerises this to OHED. The final products of this pathway are pyruvic acid and succinic semialdehyde. This family also includes various hydratases and 4-oxalocrotonate decarboxylases which are involved in the bacterial meta-cleavage pathways for degradation of aromatic compounds. 2-hydroxypentadienoic acid hydratase encoded by mhpD in E. coli is involved in the phenylpropionic acid pathway of E. coli and catalyzes the conversion of 2-hydroxy pentadienoate to 4-hydroxy-2-keto-pentanoate and uses a Mn2+ co-factor. OHED hydratase encoded by hpcG in E. coli is involved in the homoprotocatechuic acid (HPC) catabolism. XylI in P. putida is a 4-Oxalocrotonate decarboxylase.	3.19956e-61
NC_009767.1|WP_011997984.1|567681_568404_+|acyltransferase	gnl|CDD|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	1.91607e-39
NC_009767.1|WP_041331441.1|557443_559621_+|hypothetical-protein	gnl|CDD|225942	COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism].	3.18538e-05

Protein sequences

>NC_009767.1|WP_011997982.1|564907_565531_+|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase
MQTVFLDRDGVINENRVDHVKSWQEFVFLPGALAALRWLNLAGFRVFVVTNQAIIGRGIVPASVVEDIHTRMQVQVALHGGQIHDIRYCPHDDHAKCDCRKPRPGMLRDLARRWNVDLAHAYLVGDAWSDIAAGHAIGIRSILVRTGRGAQQLARPETQQHPPDHVANDLLGAVAWIMHQEEVALTRRGVAQSLYERSVGAPFFSVR
>NC_009767.1|WP_011997981.1|563777_564821_+|GHMP-kinase
MLIARSPVRISFGGGGTDLAAYYERFGGMVVSASINKYIYGIVTKNFDTTFQVISADYRGSILQVPVDGRVVSSSLEMRMGQVIYEHFNLRVPLNIFIASEVPPGTGLGSSSAVSVTLCNICSTLAGEAMNKRQLAETAYEIETKRLEAPIGKQDQYAAAFGGLNCFEFSAEGVRVTPLAMSVGNIRALERRLMLFYTGATRQAREILSEQRERSEQRSGRTVEALHRIKELGWQIKAALETGRFDDFGAMLDESWRHKKQLASGISNSAIDDAYAAALAAGAGGGKITGAGGGGFLMIYCREERQEAVHAALERLGLIQVRFAFEFEGSRILLHTNLLNSPYNWNE
>NC_009767.1|WP_011997980.1|562600_563551_-|ParA-family-protein
MARVVAVANLKGGIGKTTTVVNVGAGLALKGARVLLVDTDAQGNLAMALGVHPRRTLYDVLVDGAPVERCIIEARSGLDLLPADATLLGAQPIIARRPDWSRVLSQALQPVAGAYDFVLIDSAGSLTPLNVNALVCAHDVIAPTTVEHFSVKSLELLMAQIGRIKGGAGHVRMIIPTMYDPRVRQSGELLAMLHARYGDRVTPPVRVNVRLSEAPALGKTIYEYDPRSRGAIDYAMLVEHISRAFGFAVRPQPPAQADPAPVPQPAAAPYRSVPTANPEVCPHCGRALQHTSLAGYRISYCAQCRYKKQELVRDRQ
>NC_009767.1|WP_011997979.1|562111_562402_-|hypothetical-protein
MGVDDFRAETRRLLERALEDAQQTDEREALIERYTDELTLLYGRHAHALLTEVIEDARTRLDARLSPDPIRQTIATVQTTVQDLWNALWGPGDIRR
>NC_009767.1|WP_011997978.1|560814_562107_+|adenylosuccinate-synthase
MPVVAVIGAQWGDEGKGHIVDMLAERARLVIRYGGGNNAGHTVVNRHGTFKLHIVPSGVFDPAIVNIVGSGVVVDPAVLLEEIANLEARGISTAKLFVSDRAHVIMPYHILQDKFDESLRGEAKIGTTGRGIGPAYADKMMRIGIRMGDLLHEETLLQRLRLALEIKNKMLTTWYGAQPLSLHETFLKYLEYGSKLERHVTDVYPIIQRALDRDLPVLLEGAQGVLLDIDHGSYPYVTSSPPGAAGACQGSGIPPARLSSVIGVCKAYTTRVGEGPFPTEIEDETATTLRQLGTPWAEVGTTTGRLRRVGWFDAVMARYAVRVNGIDTLAITKLDVLDTLPRIKVCVGYRRHDTELDYPPANPFILGQVEPIYEDLPGWQTSTAGVRTFDQLPAEARAYVARLCELVGARLGMVSVGPGHDQIIEVHRII
>NC_009767.1|WP_011997977.1|559624_560470_-|tellurium-resistance-protein-TerC
MDIAAVTIIIQLIFLEGILSIDNAAVLGAMVAHLPNDRPITWTPVLRFLTAWSQRVLGYQREAALKVGLLGAYVGRGLMLALASVIIHVPWLRAIGAAYLVYLAFHHFAELYHAHRAEAGHDPIPRARGGFWSTVLAIELADLAFSIDNVIAAVALSDAFWVVMTGVAIGILVMRFAATIFTRMIAWEPALQTGAFLLLLAIGAELLAEEMWHVHIEEMTQFVISASILILTVVVARTPLRVPVALAARPLIWLSAMIQLRIEATTAAMTGSFRRKEQPTE
>NC_009767.1|WP_041331441.1|557443_559621_+|hypothetical-protein
MKHLLPLLIVLLATSCSVPQQSPVETPQSSPAPIATVLPTADVFADYWGRSGGEAALGRAIGAPILLDGAPTQVYQRGMIALLPEGPSARPLPPGWADGPPSDLARLPVSSWRAMLMAPSGATPLTPLRVQVSVAGYTGRAALHLYDGRARLIGRWDVVVANGVGGVEVAPGGALGVHSALLIIDGAIAGGASRLYTLDAETTLVTGQERFDALYPMIRGFMEQCVLEYALDGVPVRGYRSPDNPLLWLRDHTYQARGFRYFETDVTSMIDAFRRAQRPDGSFPDFLAHPELGVMRSLRKEVEADVEYLFIQAVYEAWQMTGDDAWLRTNLDAMRRAARYATSDPLRWDTEQGLIKRPYTIDTWDFSYGPTTTDPTTGKPAPRHWIDDQTIWGIFHGDNTGLAYALELLARIEERVGDPTRAQQWRTEANGIMDRLNALSWNGRFFTHFVPLAPFDTPGVDEAAQLSLSNAYALNRGVLRHNQGRAIVDEYFRRGLQRGATFAEWYSIDPPFPEGSFGLAGRPGERPGEYVNGGLMPLVGGELARGAFRYGAERYAFEILHRYYFLISSTGATYLWYYPAGNPGISGADTLPTDGWGASAMLGALMEGAAGIEDRAALYRDVVLSPRWIFTRDVDGVQAIARYAASDGYVAYRWRRMSGGVELQATGSGERMRVRIPLPEGVTAPTSVLLNGAPQDYTIEDASGSRYVVFDMTAPFGTVQAIWAP
>NC_009767.1|WP_011997975.1|556163_556598_-|ester-cyclase
MRIETNRAIARYVAEAVWNQGRLDVIDEVFAPGFVNHDPSAHQVRNAKALKRWIERLRIAFPDMHMTIEDLIAEHDRVVVRWKWTGTHTGFYGSIPPSYNAVTLHGVTIERFVEGKIAEAWWSYDGSAMMLQIGAFPVAMEAGR
>NC_009767.1|WP_011997974.1|554102_556220_+|DUF2029-domain-containing-protein
MRDVPRFTWFSLLIIALAALLVAMGATVVAAPPLCDIGAGEDVGCARGFETREGDGYGSFRWTDGHAGVTLAAAGYGGLYIVDVVMAAPRPPYAPSPSVTLLIAGVSVEVAPADATRRYRFLHPPGFPSGDAIRLTIQSDTWKPADDRRNLGVLVYLARARPLGAPALPSVQHTLALLAIGLAAVRVGRRVAHPARQTAISLTMIGVCGALWGWLPTQIAPFLPIYALLLGSAALLFARAERRAPPQQPVTWREPAWLAALGGVALDALVVAGIARGAWVVPVIGAQAALVVWGTWSAVGRLWSLTDLLRIALAVRLLALASRLLSGEIGSDPDVELFYNYGRATLELGLPIVEYPSGALIPWALLALPGSRELFALALPLVNTAADLVIVWAIWQIGAQRRATEAGDNAAAPACFYALSPLLLPFWHGKYDALPTALLALGLVAFAHRRMGWSGGALGIGGALKWTPWLAAFALALGLERARSRHPFALLAFAAGGFIAVAATSIPFALIDWRRFLAPYTLQGGRAITGESLWFLALLISTPEHRLRLPAPWGAVETGQWFLGVAVAVQGAMLAGLMLSALRSPLPAWRLIALAALMPAAFLLLNRVFSPQYMVTITVAALIASAAVGAPPHAIRRIILLLAIAQAANLLVWPNTVSWWTLASAIMFVTTLSALGLLVLMAHDAPSLASCFHRYRKRPDLEHHR
>NC_009767.1|WP_011997973.1|553087_554110_+|fumarylacetoacetate-hydrolase
MRLVTFQFIDRQPRVGVVIGDTIIDLAAAAPLVFDDPPPPPWRLLDVLEGMPDGMGLDGAAEIVAAVIDQIGGADDEGMETSRYGPLTIGGVEMLIPLDEAHLLAPLPRPPSLRCFEASERHMAALARLHGGGMPYYWYERPIFAFGNHAAIYGPDAKIPLPRTTAFDYELEVACVIGRAGRDIPLDEANDYIAGYVLLNDWTARDVQHEELIAGFAFSKSKDAATSLGPWLATPDELDEYTLDGGHFNLTLIARVNGIEQSRGNLRDLAYTFAQMAAAASQDCTLYPGDIIACGAIGGSLLEATDGQGPWIEPDDLVELEAAGLGVLRNRIVVRDFLRA
>NC_009767.1|WP_011997984.1|567681_568404_+|acyltransferase
MKQVNLYLSRQASSIGRYIWEQIVQAAAGWIPGIVGIGVRAVLYRAILHMDGVAAIEEGVRIRFADNVRLGRGVYLDHGVYLHACPGGISIGPDSYVMKNAILHVYNFRDLPRAGIRIGARSLIGEACILRGQGGITIGDDVFLAPLVQMLAVNHVYHDTSRPISLQGITCQGITVENGAWIGGGAIILDGVRIGKNAVVGAGAVVTRDVPDYCVAVGNPARIVRDLRSQPAAPANVPVY
>NC_009767.1|WP_011997985.1|569441_570686_+|glycosyltransferase-family-2-protein
MTTLSVVIPAYNEEDGIAAIVERVLAIEPELPKYGVDALECIVVDDGSRDRTAEIVRRYVPRVRLIQQPNKGYGGALKTGFQAASGELLGFLDADSTYPPEYFPQMCRVALDGADLVIGSRMAGATSEMPLVRRIGNFIFANLLSLVAGVRISDSASGQRVIRREVLPILYPLPDTLDFTPAMSTRALHENLRMVEVPIPYKERSGRSKLSVVRDGLRFFKSIVWTALTYNPVRIFGGIGALLLLLSMLVMVLAFGLQAFGIDSVVSFPRLFGALVLAVAGVTLYTTGTSFSYIVALFHKRPIRQGMFGPRGNGRKIEKHYWWLGILAVLLGVALYVAAVAFDLTNPALQVSWFAPVVSALMVLTGVQLVSAWSLARVLAELSAREGLAARDLTGNSVSDVAANAESVRTAAVS
>NC_009767.1|WP_041330142.1|570942_572958_+|twin-arginine-translocation-signal-domain-containing-protein
MTKRTSRPIISRRRFLQACACTVAAGALGATGYVVANAPLPPPYPESSVFQTPVAGIPTPGAPILLVTNPGAQPSFGAYLGAILRAEGFVAFRMARLDAINPALLAQFPLVLLTVGPLTAEASDLFRAYVLNGGHLIAFRPDPRLADLMGVRALGGDVTDGMLAVADHLLAQGITTQALQVHTPMAQYELAGAEAVAWIARRDSSRTSYPAVTLMRAKKGIAALWAFDLPRNIALIRQGNPAAANQERDGMEGVRTVDLFVDWIDLDRIDIPQADEQQRLLANMIHALAGEAPLPRLWHLPAGASAVLVATGDAHGLLASHIATALELVSRYDGALSIYYAPPPMSNRSRTLRRVRWLAEELPVAGAVFTDDAGYPTPKDVARWRERGHGFGLHPYVEQGVGKGYHEYWNTFIKLGYGPAEPTVRTHRVLWSGWVETARVQAQYGLRMSLDHYHSGPLMRRADGRWVHGYLTGSGLPMPFVDEQGNLLRVYQQHTHIVDEHLMRVFDTGYEMGVDVNEAIAIACRQIDAAVEQYPSALGLQCHIDPFAFGGEKAEAASVWFDRVLDHAASRGVMIVSAEQWLAFTEMRDQAEMRNLMWNESEGVLMFEAVISAESQRAPALLLPLEHRRRILRQVTIDSVLASAEQKRVGGVAYGAVALAAGRRQVRAYYR
>NC_009767.1|WP_011997987.1|573768_576255_+|hypothetical-protein
MTNVQHSSWRRYLGLALVTASILALQVTFTRIFSIMIWHHFTYLIIGVALLGGGASGTFLAVRAWDADTLKRRLGKLVVAYSLMVLINLAIIGSIAIDPLRGGQIAHTLIGLAVYFVGLFTTFFLGGLIVSGVFTLWHREAHRLYFADMLGASVATLAIVWVIQMIGGPATIVLTALLTLAGSALFGVASGRRWRIGAAILGIGQAALIGWLLIGASLHLPVPGSKELGWAQQQFNTYPEYTRWNPVGRVDVLPTIQVKEPMIVGGISKVYLASDAFQRAPLYDLKLVTLDGTSMTGMYRFDGTDEDLKRFRFLDHAIISAPYHMGLKHDTALKIGIGGGLDILLARLYGAQQITAIELNADVVKLLEGPYREFSGNLAGHPSTRIVVAEGRSFLTRDATTYDLIQGIGLDNLVALSGSAYVLSESYIYTVDSFTLILNRLNPKGVFAWTRNVDQPPREMLRITALAAEALRRRGVADPASHIAIVANDTNTQATLLVSPSPFSPEAIERLRAWAESNAFAVLHDPLQRLDTVYAEYLHAPDARAFEEAYPFNIFPVTDDNPFFYNYFKWQNLTFDQAFTGKLNRFPIGNLILIVMSGFSLASAATFIVAPLWRHNRRGLRLPMARPMLIYFSALGIGYIFVQIVLIQRFTLFIGYPTSAITTTIFSMLLFSAVGSLLSRRLIDRSAHLRIALAAIVLAIGVYIVALPPLFQALLHLPDAARIALSVLIIAPLALLMGMPFPTGLRQLGAHGAELVPWAWGMNGVFSVVGSTLVIIISMASTFTVAMACAALFYGVAAIVAARLYRRVEVRLPGVAGAPVDVVEGVRG
>NC_009767.1|WP_011997988.1|576687_578418_+|B12-binding-domain-containing-radical-SAM-protein
MSEHETNATNGKHIAPGDKKQGIKLVAPARADERAGEIKFVDMPREKHPRLDVLVLNPPSPDGDLFLRDIARVGRRTRDGIIWPQTALAQIGAVVQQAGYTVDVVDAIGLEMSWEEFERYMYKQKPRYMIIHATAPTLTNDMRTTFIGKAVGAITMAIGTHVTPMSRETLESYPTLDIVVRGEPEMTILDVIQTIDRQVELEHATETVPVGNPDLTSPWRKLPFPDASYLTTRGRFLGVYPQVIARALRETRGIAFRNEHGEVQINPDRPFIENLDSLPLPLHHMLPWKKYKVPIVGGPYTFVLTSRGCPAGCRYCIKHVTYQASVRHRSPQHVLEEMYMLKEMGMHHIHFEADLFTVKKEFVYDLCNAIIKDGIKLQWSCNSRVDFVDAEELALMKKAGCFMIAWGLESGSEAVLKRARKGTTVKRIEETITASRKVGIKNWGYFIIGLPGETVETIQQTIALSKRLPLDIALFHIATPYPGTPFYYEAVENGWIQMDRWEDYDMYNHTVLNYPHLSSKDLEYWAKRAAREWSLRPGPIMTFLKAASNRETLGHLWKIGTNHIRWMSGSLTGSGA
>NC_009767.1|WP_011997989.1|579058_580228_+|DUF1624-domain-containing-protein
MTTHATAGVIPQTSAAAQTATLSRITAIDALRGVALTLMALTHAAFFIGVGMQAESYGGQPVSLQSPPYWLSGLLTTLASPIFFCLAGVSLALLEQSRVRKGASSWSVSRFILARAGVIMALDLTICAWLWMGKMPYIHVLTAMGLAMIVLAGLRLLPTRVILAAAIVTLLAYQGILEVLRPQLEAGAPQSMAQALFLTYSYETLLPVGFPLLGWGPVMWLGFVLGRNLSHPLLRQPRTWVGIGAGLLALWLALRLIGGYGDLGAYRAGDPWPYFLVMSKAPPSLSYLAFKLGIAALIFAVLIAFPKGIETGLLRVLTLIGQTSLFFYVMHIVVYHLLAQAFFAINAPALPGIIYGYTIWLAGMVPLVWLCSRYRVERKKRPESVLRYL
>NC_009767.1|WP_011997990.1|580485_581670_+|glycosyltransferase-family-4-protein
MRLLVVATNTTPPSLSAEVRAGRHQRVDYLDLAQRFGTVHHDYNALRPNWLARRFEDLFRFDVRQAMAVARLAKRGGYDVVVSLSERVGIPLALMLDRRIRHVVIFHHGMSPQKLRLIRALKLQRRWDVIAAISRAEAEGMRVALGLDDQRVVALHTPVDVAFYKPSRPSTGGEAFIQSLGLSHRDYPTLIRAMRRLPHIPCHLRVGSTWVTRRGGHESERLPPNVSLQPFVHPSILRQCYEESRFIIVPIRASTQWSAGCTSVQAAQAMGKPVVATRRPGLSEYLIDGETGVLVEPGDDQGMAETIETLWNDPQRVVRMGRRAREWMASNHSLDQWLDRVEALIQRAICSTARHWTNGSFLASVCAICLSPAWGTCLRAMGETLSALTSVIAA
>NC_009767.1|WP_011997991.1|581843_583310_+|flippase
MNHLATTVLRNSAFGMASHIAMKLLSFTFSVLIIRNLGATDFGQYAAVLGFGSVFLFIADLGLSPYTVREVARLRDQTDGKERIQALYADVLILRLILSVIAGILVVSAAILTGRPLLMIGAIAINSLTVLIYAVHGSSEAVLSGYERLDLVSGMQVVNQLAFVTIGGLALWLGFGYYGLIVATMIGVTLMTALVVRAVLRLGVRPGRITWRRWLPLLRAALPFGIIGLTLGISYRFDTVLLNIYGGDAVTGHYNAAYNLIFSLVTLSNVLNTALYPSLSRQSITAPETLPLVYERVLRYLMLVALPIAVGGFIVAAPLIGLLFGADYAPAAPLFAILIWVLPLMFLSEFLGYVVVIAGREALVARSIIVSSSINVVANLIFIPIYGVLAAAVITVITEAVLVIQYVWLVRDLLGRMQWGALLRVALAVVAMAALVYLARSLPVLATVALGGALYGGLLLAMRVVGPDEAAFVRGVLTARRASAGGHS
>NC_009767.1|WP_011997992.1|583326_584670_+|glycosyltransferase-family-4-protein
MKIVLPVHHFLPRYTAGAELYTYRLARWLRHHGHDVEVVAVESVDHEKPGVFDVTSDTFDGIPVYRLHFNRYAQERHWEYDNPLIGEWFARYLEQERPDLVHFQAGYLMGIAPLRAAVAAGLPTVLTLHDYWFICPRWTLLRGDGALCRAVPDDPAECAWCLRLDRRRFRLPERVTGGRFGEIMRRAGYDPGRESIALRRKALLSSLALPDAVVAPSRFLAQQVRAYVQPERLHVSRLGLDLTLFSDVQRDKEHRTLRIGFIGQIAPHKGVHLLIAAFQKVQARFGRIELHLYGGLTANPGYVARLRRMAAKDPRIHFHGRIENTSVPATLASLDAIVVPSIWYENSPLAIMEAHAAGTPVVTADIGGMAELVRDGVDGLHFRFNDATDLAHVLQRLVDEPDLLSRLRSGIQQPRSIDEEMVQVLAIYDDAIARRSAPVVCSSEQND
>NC_009767.1|WP_041330143.1|584980_585883_+|glycosyltransferase-family-2-protein
MSPRVLIIILCYNGVADTLACLESLQRVEYPSFDLLVIDNASSDGTPEVVRARFPQVKVIENGANLGFAAGNNVGLRYALRHGYDYALLLNNDTEVAPDFLARLIDAAESDPKIGAVGPTITYYERPDLIWSAGGMIDWKRGIAVMRANEVDSGQYHEPADVDFVTGCALLVKRAVLERAGLLDERFFMYFEETEWCVRIRRAGFRILHVPRSRVLHKIPLNARFDKEYLAYYMTRNRLLFLRATGAPLRAWLDALLIQDLRTYLSMVMRPKWRTRSGRIGMRHAWIDFWRGRFGKWEMR

Crispr_ID: NC_009767_10

• CRISPR_ID: NC_009767_10
• CRISPR_location: 665171-665301
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_10

Consensus_repeat	Method
GAGACGCCAACGGCCACATCGACGCCAACCGACACGCCGGTTCCGCCAAC	CRISPRCasFinder

spacers of NC_009767_10

>10.1|665221|31|NC_009767|CRISPRCasFinder
TCCCACGCTGCGCCCAACTGCGGCGCCAACC

CRISPR arrays and Neighbor proteins around NC_009767_10

CRISPR arrays

The CRISPR arrays of NC_009767_10

>merge|NC_009767|10|665171-665301|CRISPRCasFinder
GAGACGCCAACGGCCACATCGACGCCAACCGACACGCCGGTTCCGCCAACTCCCACGCTGCGCCCAACTGCGGCGCCAACCGAGACGCCAACGGCCACATCGACGCCAACCGACACGCCGGTTCCGCCAAC

>NC_009767|10|10|665171-665301|CRISPRCasFinder
GAGACGCCAACGGCCACATCGACGCCAACCGACACGCCGGTTCCGCCAAC	TCCCACGCTGCGCCCAACTGCGGCGCCAACC
GAGACGCCAACGGCCACATCGACGCCAACCGACACGCCGGTTCCGCCAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_157042765.1|659119_661840_-|glycosyl-transferase	unknown	unknown	gnl|CDD|273955
NC_009767.1|WP_012119072.1|666030_666345_+|methylated-DNA--protein-cysteine-methyltransferase	unknown	unknown	gnl|CDD|226219
NC_009767.1|WP_012119079.1|675366_676407_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_012119070.1|661980_663885_+|hypothetical-protein	unknown	unknown	gnl|CDD|227829
NC_009767.1|WP_012119077.1|671224_672691_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270451
NC_009767.1|WP_011998034.1|646128_647595_-|LPS-biosynthesis-protein	unknown	unknown	gnl|CDD|349772
NC_009767.1|WP_012119067.1|654679_657505_+|hypothetical-protein	unknown	unknown	gnl|CDD|375050
NC_009767.1|WP_012119074.1|667639_668908_+|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl|CDD|274511
NC_009767.1|WP_157042516.1|651175_651532_-|hypothetical-protein	unknown	unknown	gnl|CDD|341358
NC_009767.1|WP_157042764.1|650202_651270_+|hypothetical-protein	unknown	unknown	gnl|CDD|224496
NC_009767.1|WP_012119073.1|666494_667505_+|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NC_009767.1|WP_012119080.1|676417_678277_+|family-20-glycosylhydrolase	unknown	unknown	gnl|CDD|119335
NC_009767.1|WP_012119078.1|672822_675333_+|spermine-synthase	unknown	unknown	gnl|CDD|223498
NC_009767.1|WP_012119068.1|658347_658965_+|glucosaminidase-domain-containing-protein	unknown	unknown	gnl|CDD|376625
NC_009767.1|WP_011998035.1|648415_650203_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119075.1|668972_669980_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009767.1|WP_012119065.1|652885_653284_-|VOC-family-protein	unknown	unknown	gnl|CDD|319898
NC_009767.1|WP_012119066.1|653562_654660_+|cytochrome-c-peroxidase	unknown	unknown	gnl|CDD|188554
NC_009767.1|WP_012119081.1|678273_679524_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_012119076.1|670019_670928_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_157042765.1|659119_661840_-|glycosyl-transferase	gnl|CDD|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	2.30434e-164
NC_009767.1|WP_012119072.1|666030_666345_+|methylated-DNA--protein-cysteine-methyltransferase	gnl|CDD|226219	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.79202e-32
NC_009767.1|WP_012119079.1|675366_676407_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	7.10249e-52
NC_009767.1|WP_012119070.1|661980_663885_+|hypothetical-protein	gnl|CDD|227829	COG5542, COG5542, Predicted integral membrane protein [Function unknown].	8.00981e-05
NC_009767.1|WP_012119077.1|671224_672691_+|extracellular-solute-binding-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.1215e-48
NC_009767.1|WP_011998034.1|646128_647595_-|LPS-biosynthesis-protein	gnl|CDD|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	4.16628e-42
NC_009767.1|WP_012119067.1|654679_657505_+|hypothetical-protein	gnl|CDD|375050	pfam17210, SdrD_B, SdrD B-like domain. This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.	1.66111e-13
NC_009767.1|WP_012119074.1|667639_668908_+|PQQ-binding-like-beta-propeller-repeat-protein	gnl|CDD|274511	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking].	6.99896e-25
NC_009767.1|WP_157042516.1|651175_651532_-|hypothetical-protein	gnl|CDD|341358	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	0.000105015
NC_009767.1|WP_157042764.1|650202_651270_+|hypothetical-protein	gnl|CDD|224496	COG1580, FliL, Flagellar basal body-associated protein [Cell motility and secretion].	0.00297589
NC_009767.1|WP_012119073.1|666494_667505_+|LacI-family-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	8.265e-114
NC_009767.1|WP_012119080.1|676417_678277_+|family-20-glycosylhydrolase	gnl|CDD|119335	cd06565, GH20_GcnA-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	2.54368e-102
NC_009767.1|WP_012119078.1|672822_675333_+|spermine-synthase	gnl|CDD|223498	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism].	4.98856e-20
NC_009767.1|WP_012119068.1|658347_658965_+|glucosaminidase-domain-containing-protein	gnl|CDD|376625	pfam01832, Glucosaminidase, Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.	1.07891e-08
NC_009767.1|WP_012119075.1|668972_669980_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.32902e-77
NC_009767.1|WP_012119065.1|652885_653284_-|VOC-family-protein	gnl|CDD|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	2.10626e-15
NC_009767.1|WP_012119066.1|653562_654660_+|cytochrome-c-peroxidase	gnl|CDD|188554	TIGR04039, MXAN_0977_Heme2, di-heme enzyme, MXAN_0977 family. This model describes a subfamily of di-heme proteins related to the di-heme cytochrome c peroxidase and to MauG (methylamine utilization G), an enzyme that performs a tryptophan tryptophylquinone modification to the methylamine dehydrogenase light chain.	4.36278e-119
NC_009767.1|WP_012119081.1|678273_679524_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.20178e-45
NC_009767.1|WP_012119076.1|670019_670928_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.1185e-88

Protein sequences

>NC_009767.1|WP_012119070.1|661980_663885_+|hypothetical-protein
MRVDRLLWRGAFFIRGSIAIGAAMVAAIVALFMLPVRAVYDVGSQFAPISSLYAPERSGSISYAYSQGQSLVLAPMVGAGMYGVLVRMGGPGGHDPLPARVEIGGYSAAIGDVGSIRVFRFLAPANAHGALAVRLTSATLQPPDDPRRLGLLLDYLEIRSLGWALPSLFAAGVALILIGSAWIAMTLLIKDRWLALALLTLMAIGTVWIVWGLRGQSASPLLWSVAAAVLAAFGALAAHPPPWLVRRTLVAVTLLVVAWRVALWVVAWVALQTNAWLAPLAQWMVSDARALSTLTIPLFVPFGQVTGAAWSQWDSRLYLSIVLLGYQHPPEEYANMAFLPLYPLFIRMLLPLTGGDAVAAGLIVTHCALLAAALIIADVVRRDFDEQIAYRAVATLLCFPTSFFLGAVYAESLALALLALTLWGLRRQRWMLAGVAGFFLSLTRLPGVLMAPVIAVALLEHAGWRRPPLTRAYLAPLLPLAGLGLFMAYQWWRFGSPLLFMQTQRDIWDQHLSPPWVQLSMMIETIAAGADHWSGRWMTRIFQLLVWTTFAGLTAMTLRRLPPIYGLTAVMMLAPAYLTNVSHSLPRYVLLALPAFVAAAALIERRPVLLMATPVALALLAWATALFVNGFFVG
>NC_009767.1|WP_157042765.1|659119_661840_-|glycosyl-transferase
MLRRGRAIEPDIRMGRVLARLTLAFLALGVLVSLGVAGVAYGAYSDLAASLKPRLAAIENRESFETTRLYDRNGQLLYEFFGAGKRTRVSIDQVSTYLISATVAIEDRTFFENRGVDYLGIARTLLTSLQAGEETGGASTITQQLIKNVVLSDEERRYENRYQRKLIEIILAQELSEQYSKNDILELYLNEIYYGNLAYGIEAAANVYFGIPAKDLNLPQAALLAGLPQLPNVYDPFNYLDGGVLKGVRLGDGWLSPAYRLPTGTPPPKWRQVAVLRQMVDEGIISDPVARRAAAVDLAFASQDVPLNAPHFVFYVRRLLEEEYGPQFANMGLSVYTTIDLDLQRMAQEKAAERIQELEARNIHNAAVVILQPNTGQILAMVGSIDYNKTIPTKTPGESGNVLDGQVNVTVRERQPGSALKPFTYLAAMERGMTPETVIWDVPTKFPLIAGEWYEPQNYNGRWNGPVRMRAALANSLNMPAVKALKYAGIDETISLLRRAGITTLQRGSGFYGLALTLGGGEVTPLELTTAYNTLASGGRYYPPVAILKVVDSSGRTLQEFRPTLRPQTLNPDHVAIITDMLSDDAARAPVWGLNSKLKLSRPAAVKTGTSNDWRDAWAVGYTPYVTVGVWTGNNNNEPTKKVESLTGGGVIWHNIMEELFANPKFQRLLAEPYLDGRLPLDFTKPSWLVRKPICPLPGPYHVSREELFAPDMLPAGSVPVSDTTQLCRDIFTEVQVVRLSDAPIETTSLITDTAVAAQWYCAPGEGQSIASEQVTTILTWNVPPPDPDEQIVYTWEGMQSAMGDWTVAPIVASAIPPCTAEMLTPHTPPVPGAVRMPDLRRFGENQAKEQLAALGIFNVYVDYQTRDRIPDVFDDYAPYAVVSTLPAPGEWIDPNMTVVLGVRAP
>NC_009767.1|WP_012119068.1|658347_658965_+|glucosaminidase-domain-containing-protein
MFTEQTPILGRPTASVAQLAAFILARPHGVYTAHDIEAVIVPVYWQLCAEVGIDPTLAVAQMIHETGNLTSFWAARPQRNPAGIGVTGQKQTTPPPNREGWAFNGQSQQWEAGVSFATWEHDAVPAHVGRLLAYALPIGAENPVQLAAIERALRYRALPARIRGSAPILKQLGRAHNPTGQGWASPGVDYGAKIAAIAVRIVMGK
>NC_009767.1|WP_012119067.1|654679_657505_+|hypothetical-protein
MKRFLLPGHRTLAMIVSTMMIMALVAISLPMAASVQAAGVISGNVFRDFDGDGARDENEPGVGGITVTAYDPSGVVAGIAVSFATLCLGPGNPIAECTALNTPAIGSYTLNAGGAGPYRIEFSGWPAYMRPAVQGAGNNTSIQFVPDGNSSNVNFALHNPAEYCQQGPDIVTSCYTNGDPQGGGTTAGRFAIVQVPFEPPTTGPGDNVYLAIGQQVGATWGLAYQRSSRTLMAAAVVKRHVGFGTGGIGAIYRIDRDRVAAPAVLIDLNASGYPSGVAVGPDPRSPGDLAINEADPSRDPAAFDAVGKIGIGGIALSEDEETLWVVNLTSRALLEIRIGVPPVTPTAADITVHPLPTPACSDGVFRPWAVKMYAGQVYVGGVCSGELPYAGKNIDTTDLTASIYRHDPDGPTGNFTEVFSFPLDYPRGRASNAGGGNRASAAWLPWINAWSDIGPPMVLPGQGPYGQTIYPQPMLTSIDFDVDGAMLLAFNDRAGMQLGNRNYSTIAADTGEYEGVAAGDLLRICVNPAAPSGYSLENAGACPGGLVGGSTTNQQGPGNGEFFNRDEYGTAHDEVTIGGMAMHYGLRRVIVTSYDALPADQNGPVRSGGLRWFNAANGALTNAYVIFGRDQPIGSPPGTRVRRATFGKSAGLGDLETFCDQAPIEIGNRVWLDANRNGVQDPDEPPIPGVTVELWRNGVRIGVAVTDAEGTYYFRSGRDPVDADREDNIIHDGGIGIRTRTGTPGGASEYEIRIPNITGPNRQTALTNLTLTTANADDTPNGDSRDSDGVAIGNNAVFVIPYENHAAAGTNNHTYDFGFFEGVPTAIVLEYFTAIQEGGTVTVRWATLMELDAAGFRLLRSATGRIDDAVIVTPTLIRARGGPAGGAMYEWRDPTGQPDIAYAYWLEEIETTGRVNRYGPAMARAPSASPPYRVMIPVIIR
>NC_009767.1|WP_012119066.1|653562_654660_+|cytochrome-c-peroxidase
MQRFVHFFSLALLIAVFITVIRGDSPIARTPAPGESPQAMIALGRRLFYDRRLSANEQIACAACHRQELGFSDGRVVSNGATGALLRRNTPGLFNSGELLAFTWANVEVRTLEQQVERALFTVDPPEMWVRGYETTVIDRLRADPEYLRQFTAAFPADDDPFTWRRITGALAAFVRSLAARNTPYDRYVYAGDRAALSDSAQRGMALFFSPGLACGHCHVDVPSPERATPPRWSDLAYVATGAGYSADRGLAEQTGNPADAYRFRVPPLRNVAVTAPYMHDGSLPTLEAVIRFYESGGRWGAGVEPERVAARHPLIAGFALSDEERRDLIAFLEALTDDEALRNPAFADPFLSDARTPSVRSLSR
>NC_009767.1|WP_012119065.1|652885_653284_-|VOC-family-protein
MQLEHVALNVADPDAMAQWYVTHLGMQIVRHIPTPNATYFLSDSVRRSVIEIYRNPAAPVPDYASLSPLALHLAFSTSDMEGDIARLVAAGATHVSPIDTTPSGDRLTFLRDPWQVALQLAQRSTPLLEPTP
>NC_009767.1|WP_157042516.1|651175_651532_-|hypothetical-protein
MLHDHRRIVGLLTERDLVAARRRLERVYRRFDELTVADALSPDALNHIVCIAPDMPRKEVVEAWTCGGVITCLVTPEGSLDAAPLGIITHADLLYRMQGCLPEKEPRSRVRHRSRSAA
>NC_009767.1|WP_157042764.1|650202_651270_+|hypothetical-protein
MGKRRRAIKPGTRRAAAQAPSVRRGVLLLVAGMMTLLAVAGAGWWMMRSAENALPAAPTRPAAVIGGVTGCRGIPRFVARLGYADRLGISTSERTHKGLVIFDGRVPVSADPAQRDIHQEPSWDDAGTLGPFVIDRDGHIYTAAVPRTAVSDNPPGSLNVVYRIDSETAELQPFVTLPGAVGSSENPFGILGMAYDCDTHALYVSTVAGSTRQAEQGRIVRIDLASREISDEVIGVDAIGLAVFQGRVGKRLYIGLARSADVGSVALDAAGHATGEFRVDLALDERLAQFAEPRVRRISFDQTNMTLFVVPFAFNLRAVSEQQQVTLRYGYDAERDSWVPFPASIPASGRVNLRG
>NC_009767.1|WP_011998035.1|648415_650203_+|hypothetical-protein
MRRMVSTLVFLLLVACSQPAVSPSPPPAPARTPVVRPITPPADPGRLALRATPSPDAAPLLAERLAQVERALVRAEPLMALEGLDTAQQTAWQLAIADERVRQALVTADGRMVRSEVFGVYPLGPADDALAGAECQNRACYRVELYDYARNRTVIAIVEPQAQRVYRVAALDDTQPTVVPRHLLDLAAQIALASPDVRKELDLPPDQSMIQQPQMKVQFQATACERSRRLCTAPIFVWGDRALWVIVDLVDYTIIGLRWTDLGASSRRPVTEQRLQDDVVTARFCDQKTDLRRSGWSLRYLLTSTDGLRIEDVRFNETPVLRSAKLVDVHISYSQQEGFGYSDALGCPAFSAAAVVAWDGPQIEAIRSANGVEGFALVQRFRSEFWPTPCNYAYRQRYEFYQDGSFRIVFVSEGRGCGNDGMYRPVMRIAMADDQYTFSEWDGAGWRDWTTEGWQVQRDTTLYTPEGFQYRIVNGARRGWHIAPGRGQFGDGGRGDYAYLYAVRGDADRDEGESDLPTLGDCCNTDERQGPERFLTPPESLERAPLVIWYVPQLKNSDTPGAEYCWADSVLNDGVFVPRIWPCAAGPLFVPVGGE
>NC_009767.1|WP_011998034.1|646128_647595_-|LPS-biosynthesis-protein
MDTQFVHRLVRRQWRLVIVGGGFVGVLALLVSVFQSPIYQASTTVLVNQGRGTAAPDYESVLMSQQLTRTYAELLKKRPLYEMVIANLRLETTPERLMQQVRVSTIRDTQLIVVTARDRSPQRAADIANELVRLLQEQDRQLLTGSYGSGARGLSVVEPAWADAVPASPKTLRDTLLGLIFGLLGMSGIALVREYVDQTIKNGDEAVCAVGAPVLAAVSARSINNDVRRRSIGDGDDTSAEDYWMLAVRTRSALADNPARSLTTTSAEPLADAYAVAVHLAAIYARLGQRVILVDADLRHPTLHSWFNLSGDTGLHAALACTHSLPVYRYLQPTSVANLMLLPAGEPVANPLILFDSPRLRERIGELYQHADFIIIAAPALLSAAESLLLAQAADAALLVLRAETTPHAAAAAARALLDQARIRLPGIVLTGVPDHDAASRIGAFVSVMSRPMFGKRLIESLAVAEEKSSRSISMSSASTASSQSPKQ
>NC_009767.1|WP_012119072.1|666030_666345_+|methylated-DNA--protein-cysteine-methyltransferase
MSGYYDDVYDLVCRIPRGRVSTYGRIAAMTTVPRGARCVGWALHALGPAQARHVPWWRVINAAGRISNEYHAALQRALLEAEGVVFDERGSIDLKRYLWDGTTS
>NC_009767.1|WP_012119073.1|666494_667505_+|LacI-family-transcriptional-regulator
MRRRSTIREVASRAGVSYQTVSRVINNSPDVADATREHVLRVIAELDYHPNAQAVSLSRNRTDIVGIIVDTVTSTFFAQTIDGVVKALRRHGRFTLLATVEDATQFDVIDTLQRSRRIDGMVIVLPLANSLSLSRLTPGRVPTVHIDLQYDMDVYGITVNNYRGARLATEHLIDLGHRRIGIITGRHDIPVGQLRLDGYRAALRDHGIPFDPTLIAPGDFSFASGVAGAERLLALDPRPTAIFACNDLMAIGTLHVATRYGLRIPADLSVMGFDDTPEAALACPPLTTMRQPLRAMGEMAADLVCRLIDGEQPEQMRYTVETELVVRFSTGRCPGD
>NC_009767.1|WP_012119074.1|667639_668908_+|PQQ-binding-like-beta-propeller-repeat-protein
MHTTGQRGLWMVAILALLGAIGYVALRPPSPASFDAALPAPTVGANLAAQAAPDNPFAQSAPASPDSPPVGEWSMEGLNPARTRAVETPIAPPLNQQRVIVTASFEEGVSPPVIARGLMLLETKDALSAIDLRTGRQRWAYRQKGAYISPAIAGDTVYFRAEQANQGQLVALELSSGRQRWAFTPKRLSAAANNYFGGHLTSPVVVEGVVYVGAGKELYALDAISGKMRWEFSAQDFITSSAAVADGRVFVSDFSYFYAIDLTSGGLIWSYPAHSAVYFSSVAAGDLVLISSGQNLIALDVRNGARRWEKSVSGKSLIPAGAQGDTVFVKTTNELFALDRSDGRELWSFRDVNYVSLPALTQEYVFVVNGMGAGASVVALDMTTGANVWSQPVPRLATTAPVIAGRAIYVRTTDGRVIELLS
>NC_009767.1|WP_012119075.1|668972_669980_+|sugar-ABC-transporter-permease
MAVQTAQVPARQKRKPALFGLIPAGKIERREALWFWIFISPWVIGFLAFTLYPIVMSAYYSMTVFNVASPPVWVGFENYLDLFNDRVYWKSLQVTGYYTLLSVPLGIAFGLMLAVLLNQRVPALGVFRTLYYLPALLTGSVAVALLFSWLLNPQFGAINLIIRNLVGPNGLIPLGITGPRWLQDPNWVIPSFTLMSLWGFGGTMLIYLSALQGVPTALYEAAEIDGANRIQQFFNVTVPMISPVILFTFITGVIGAMQQFTAAYVISGGMNLGAPAYSSMFYNLYLFLNAFRRYRMGLASAQAWILLIVILLLTLAMFWASRRYVHYESDEEGAI
>NC_009767.1|WP_012119076.1|670019_670928_+|carbohydrate-ABC-transporter-permease
MATQTTSSGVRPATPFVRRGLWASKRRREQIVTIISTIIVALGLIIILFPLVWMFSTSLKTRAEVAKFPPVWIPSVPQWDNYRVALTGENRFDIYFKNTLIYAGGAALGETLSCALVAYGFARLRAPGKNALFVLVLATMMLPFWVTLIPQYIIFARLGWIDTYLPLLVPKFFGSAYLIFLLRQFYKTLPKDYEEAALIDGAGYFGIWWRIIVPLSLPAVGAVAIMSFMFHYQDFMGPLLYINSQYNYPVAIGLQQFRAPFGGTAFHLLMAASLVTLIPPMVLFFLAQRYFIQGIVVTGVKG
>NC_009767.1|WP_012119077.1|671224_672691_+|extracellular-solute-binding-protein
MKIRQYPWILLLGALMLVLAACGGQQGASPTAAPGEAPTTAPASDLPTPTPVIEFAQQPQSGQKVLVWMVRINTVENRWERDVVLPAYQQVAPDVFVKVLNINQDDIAVKREAMIAAKEPLHVWSSNWGGDGFASDRFRGLLADLTPLIERDKWDTSDFIPEVFGIYNVEGKQYGIPFLTTGSYVYYNMKLFDEAGVPYPPSDWNDKSWTWDAFLETAKKLTKNPDDPSTAVYGGVNGLWPPFDSIPMIWGKDPFTAQALETGFSDPIKLDEQTAAAFQAVHDLVYVHKVAPDQAASQALDQLGGAFLSGRVAMFMTGGWGHWNYKDIIDDPNGFCWGAAPLPWGTPDATIRATIFTDPWVVTAGMDAENTDMAWNFVKFLASAEQQRAYTLATGTPPVRQSLLNDYYKQYEKCVPAEKTKESFQGAFSHGRESSNHLLVKFDELSQTWDNLLSPFWNDPNAKASDLMPLLESDVNAALERIRKEAGR
>NC_009767.1|WP_012119078.1|672822_675333_+|spermine-synthase
MKQAQQTGVVFALFFVSGASGLIDEVVWFRLLSLSFGVSVYAASAVLTAFMGGLALGSWAFGRITARLTQRHKSEATATALLRLFALLLMGVALFAFATPALFSSLTNLYVWIAHRLQPEPFAYHAARTALATLALVPPTFLMGGTLPLLAHLLAVRHRDHGRRLGALYAINTFGGVLGALAAGLVLIPSLGVSGSLYLGGALDLTAAGVAFWLARTWREAPLDPAATPQPAASAPTPTPRHASRPLAQRASGGRAVVAVQAMGASATDAPAAHNGAIATTAMPSASKRALPLPTPARLALIGYTLSGFAALGYQVVWTRTLAIFSLNAVYSFTIMLVTFLIGLAVGSAWMGRRIDRYEQPLALFGWLQIGIGMSAVIALYAFARMPTLLDIFTARTGFLASLWAEFFAAAVIMMMPTLLMGAVFPVAARLYATPPDTDNPVAPDRGGVGARVGRLYALNTVGATLGAFMAGFVFIPLIGLQHSSLLLAMLNLALGAGATLRASPTLGERLRLAGVTGATLLAAALLPPGVYLGFREGVIPELVYYREGVDATVAVFEVKYPPLKMSFVNGRNEVPTDKHSMRAFHVLGHLPALLRPDAQNALMIGFGNGIASGAMATHPLPRIHAVELVAEQVEAARLYEAENRSVLDRPGFQITIEDGRNYLLRSAERYDIITADATHPINSSSWALFTFEFYTMVKSRLTDDGVFVQWLPFHDLSERDYRDIVCTFQRVFPHTTLWYTGATHSFLVATPRPLTRDQVLALDVQLRQSAAGADLGDGRLLAADLIMHEEEVAAFAANGRIVRDDRAFFIPAMDRERILAALEPYARAAARDAGR
>NC_009767.1|WP_012119079.1|675366_676407_+|Gfo/Idh/MocA-family-oxidoreductase
MADKLRVGVLGLTHDHVWSNLRDLASCEDGMLVAAADPNPALREHIRSLGCEQVFDDYSDMLDAVKLDAVYVFSDNLRGAELTEMAAARGLHVMVEKPMAATYADAARMRGAAAAVGVQLMVNWPIMWWPAVQYALNLIAEGRIGQVWQVNYRAAHIGPRELGCSPFFCEWLYDPRRNGAGALMDYCCYGAALTCALLGLPSRVTALTGRLWKPDLLAEDNAVIVMQHARAISTSTASWTQVGDMTSYEPMIYGSEGTIHIREHGRELWLADREHRNGIRLDIPEPPIGMRNSAEYFLGHIRSGKPITGLCSAEVGLMAQEVLEAGILSAAEGRTVSLPLPLTLLA
>NC_009767.1|WP_012119080.1|676417_678277_+|family-20-glycosylhydrolase
MESLSLLPMPQSLTMLPGRYVATSAQRILLQGTAPGDLWFTARRLQNALRAYAGVEWELTATPEGPPGEIGATLRVAADSVIHPQGYALTIKDGGIIIEAPEPAGIFYGVCTLIQIIEQSGRSLPCLHINDHPDFAARGVMIDISRDKVPTMETLLMLTDMLAGWKINQVQLYTEHTFAYRNHPDVWARASPLTGEEVLALDAYCKERFIELVPNQNSFGHMHRWLIHPRYAALAEIHGEFQAPWGVMRGPFSLAPEDPDSLKLVRSLYDELLPHFSSRLFNVGCDETVDLGQGRSRDACAQRGVGRVYLDFLLKLYDAVKQHGRTMMFWGDIVNNHPELIDELPRDLIALEWGYEADHPFDRHCARYAAAGIPFYVCPGTSSWQSIAGRTDNTLGNLRNAAENGLKHGAIGYLITDWGDMGHWQVLPISFLGFAVGAAFAWAYAANRDMNVPAAVSRHAFTDPTGAMGQVAYDLGNVYRAVGYEPPNSSVLFWVLQAPDSDARDLPPLDFDRALDAINAAIQPIAVERMIRPDAPLILQEFDNTVRLLRHACRLGQLLTQPDGAGALPRRRLLNDDMREIIREYERLWLARNRLGGLSDSVARLERVRARYNPQEQTP
>NC_009767.1|WP_012119081.1|678273_679524_+|Gfo/Idh/MocA-family-oxidoreductase
MIRIGIVGCGRILNAHLQGYLQLRRLGIDNFRITALCARRLEDALMFRKRGEGPPPRPPVLDPATGDPLAAPHTYVSDIHDDVEVAVYTDYRDLIASGKVDAINDLTTLALHHQVGLAAIDAGLHLLSQKPLAISVRAAKKMVTAAKARGVTFGVFENVRQARGVRAMAWAVRQGLIGEPQISVMGFLGGLWSPDRVVAETPWRHKKLLGGGGGSIDIGVHQMHLQRYVVGEIAAVSAVARTFAPVRYLRDPQGNVLDQVQADVDDTFMATLQFERGAIGQLWWSWAGSPEEVSISGAPAIIGSKGVIRNGQIVTADGERLPLDETFEQEMTPAERERFFPLGLTDPCAIQNLDWLRAIECGADPETSGEEGLRDLACAFAILESSALGRTVTQQEVLDGAVDAYQRAIDEHYGLL

Crispr_ID: NC_009767_11

• CRISPR_ID: NC_009767_11
• CRISPR_location: 681123-681456
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers

Consensus repeat of NC_009767_11

Consensus_repeat	Method
TCCCTCCCCCCTGCGTGCGGGGGGTTCTGGGATGCAGGGCTGTACAC	PILER-CR
CCCCTGCCCCCTCGCGTGCGGGGGTTCTG	CRISPRCasFinder

spacers of NC_009767_11

>11.1|681170|20|NC_009767|PILER-CR
CAGCGAAGGCGCGACCCCTG
>11.2|681237|32|NC_009767|PILER-CR
TTTTCCAGCCCCACCAGAAGTCTTTGGGGTCT
>11.3|681213|33|NC_009767|CRISPRCasFinder
GTTTTCCAGCCCCACCAGAAGTCTTTGGGGTCT
>11.4|681275|32|NC_009767|CRISPRCasFinder
GGATGCAGGGCTGTACACCAGCGAAGGCGCGA
>11.5|681336|31|NC_009767|CRISPRCasFinder
GTTGACTACAACGTTGCAAAACAGGTGATGC
>11.6|681396|32|NC_009767|CRISPRCasFinder
CGAACACTCGTAGTGACCGCAAATTGCGGACA

CRISPR arrays and Neighbor proteins around NC_009767_11

CRISPR arrays

The CRISPR arrays of NC_009767_11

>merge|NC_009767|11|681123-681456|PILER-CR,CRISPRCasFinder
TCTCTGGCCCCTGCGTGCGGGGGGTTCTGGGATGCAGGGCTGTACACCAGCGAAGGCGCGACCCCTGCCCCCCTGCGTGCGGAGGGTTCTGTTTTCCAGCCCCACCAGAAGTCTTTGGGGTCTTCCCTTCCCCCTGCGTGCGGGGGGTTCTGGGATGCAGGGCTGTACACCAGCGAAGGCGCGACCCCTGCCCCCTCGCGTGCGGGGGTTCTGGTTGACTACAACGTTGCAAAACAGGTGATGCGCCCCTGCCCCCCGCGTGCGGGGGTTCTGCGAACACTCGTAGTGACCGCAAATTGCGGACACCCCTGCTCCCACGTGCGGGGGGTTCTGG

>NC_009767|11|1|681123-681292|PILER-CR
TCTCTGGCCCCTGCGTGCGGGGGGTTCTGGGATGCAGGGCTGTACAC	CAGCGAAGGCGCGACCCCTG
CCCCCCTGCGTGCGGAGGGTTCTGTTTTCCAGCCCCACCAGAAGTCT	TTGGGGTCTTCCCTTCCCCCTGCGTGCGGGGG
GTTCTGGGATGCAGGGCTGTACAC

>NC_009767|11|11|681184-681456|CRISPRCasFinder
CCCCTGCCCCCCTGCGTGCGGAGGGTTCT	GTTTTCCAGCCCCACCAGAAGTCTTTGGGGTCT
TCCCTTCCCCCTGCGTGCGGGGGGTTCTG	GGATGCAGGGCTGTACACCAGCGAAGGCGCGA
CCCCTGCCCCCTCGCGTGCGGGGGTTCTG	GTTGACTACAACGTTGCAAAACAGGTGATGC
GCCCCTGCCCCCCGCGTGCGGGGGTTCTG	CGAACACTCGTAGTGACCGCAAATTGCGGACA
CCCCTGCTCCCACGTGCGGGGGGTTCTGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_157042766.1|679580_680936_+|beta-glucosidase	unknown	unknown	gnl|CDD|274539
NC_009767.1|WP_012119079.1|675366_676407_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_012119088.1|689668_691735_-|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173810
NC_009767.1|WP_012119077.1|671224_672691_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270451
NC_009767.1|WP_012119076.1|670019_670928_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_009767.1|WP_012119078.1|672822_675333_+|spermine-synthase	unknown	unknown	gnl|CDD|223498
NC_009767.1|WP_012119074.1|667639_668908_+|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl|CDD|274511
NC_009767.1|WP_012119092.1|695659_698479_-|hypothetical-protein	unknown	unknown	gnl|CDD|274708
NC_009767.1|WP_012119084.1|683552_684287_-|VOC-family-protein	unknown	unknown	gnl|CDD|379203
NC_009767.1|WP_012119073.1|666494_667505_+|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NC_009767.1|WP_012119080.1|676417_678277_+|family-20-glycosylhydrolase	unknown	unknown	gnl|CDD|119335
NC_009767.1|WP_012119085.1|684594_685563_-|esterase	unknown	unknown	gnl|CDD|223700
NC_009767.1|WP_012119090.1|692994_693528_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119075.1|668972_669980_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009767.1|WP_012119089.1|691873_692809_+|GlcNAc-PI-de-N-acetylase	unknown	unknown	gnl|CDD|274584
NC_009767.1|WP_012119086.1|685592_688235_-|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009767.1|WP_012119083.1|681743_683438_-|formate--tetrahydrofolate-ligase	unknown	unknown	gnl|CDD|376511
NC_009767.1|WP_012119081.1|678273_679524_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_012119091.1|693781_695659_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NC_009767.1|WP_083760262.1|688454_689633_+|MFS-transporter	unknown	unknown	gnl|CDD|340893

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_157042766.1|679580_680936_+|beta-glucosidase	gnl|CDD|274539	TIGR03356, BGL, beta-galactosidase.	0
NC_009767.1|WP_012119079.1|675366_676407_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	7.10249e-52
NC_009767.1|WP_012119088.1|689668_691735_-|S8-family-serine-peptidase	gnl|CDD|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	1.58116e-103
NC_009767.1|WP_012119077.1|671224_672691_+|extracellular-solute-binding-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.1215e-48
NC_009767.1|WP_012119076.1|670019_670928_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.1185e-88
NC_009767.1|WP_012119078.1|672822_675333_+|spermine-synthase	gnl|CDD|223498	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism].	4.98856e-20
NC_009767.1|WP_012119074.1|667639_668908_+|PQQ-binding-like-beta-propeller-repeat-protein	gnl|CDD|274511	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking].	6.99896e-25
NC_009767.1|WP_012119084.1|683552_684287_-|VOC-family-protein	gnl|CDD|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	5.30194e-41
NC_009767.1|WP_012119073.1|666494_667505_+|LacI-family-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	8.265e-114
NC_009767.1|WP_012119080.1|676417_678277_+|family-20-glycosylhydrolase	gnl|CDD|119335	cd06565, GH20_GcnA-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	2.54368e-102
NC_009767.1|WP_012119085.1|684594_685563_-|esterase	gnl|CDD|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	2.14733e-12
NC_009767.1|WP_012119092.1|695659_698479_-|hypothetical-protein	gnl|CDD|274708	TIGR03662, Chlor_Arch_YYY, Chlor_Arch_YYY domain. Members of this highly hydrophobic probable integral membrane family belong to two classes. In one, a single copy of the region covered by this model represents essentially the full length of a strongly hydrophobic protein of about 700 to 900 residues (variable because of long inserts in some). The domain architecture of the other class consists of an additional N-terminal region, two copies of the region represented by this model, and three to four repeats of TPR, or tetratricopeptide repeat. The unusual species range includes several Archaea, several Chloroflexi, and Clostridium phytofermentans. An unusual motif YYYxG is present, and we suggest the name Chlor_Arch_YYY protein. The function is unknown.	1.02044e-93
NC_009767.1|WP_012119075.1|668972_669980_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.32902e-77
NC_009767.1|WP_012119089.1|691873_692809_+|GlcNAc-PI-de-N-acetylase	gnl|CDD|274584	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase, also called 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species. [Cellular processes, Detoxification].	1.45157e-49
NC_009767.1|WP_012119086.1|685592_688235_-|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.16734e-119
NC_009767.1|WP_012119083.1|681743_683438_-|formate--tetrahydrofolate-ligase	gnl|CDD|376511	pfam01268, FTHFS, Formate--tetrahydrofolate ligase.	0
NC_009767.1|WP_012119081.1|678273_679524_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.20178e-45
NC_009767.1|WP_012119091.1|693781_695659_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	5.87625e-113
NC_009767.1|WP_083760262.1|688454_689633_+|MFS-transporter	gnl|CDD|340893	cd17335, MFS_MFSD6, Major facilitator superfamily domain-containing protein 6. Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.36438e-74

Protein sequences

>NC_009767.1|WP_157042766.1|679580_680936_+|beta-glucosidase
MRHFPDDFLWGAATAAFQIEGATREDGRGESIWDRFCATPGKVLNGDTGDPACDHYHRWRDDIALMKSLGFPAYRFSIAWSRIMPKGRGAVNPAGLDFYDRLVDGLLAAGIRPFVTLYHWDLPQALEDAGGWPARDTAAAFADYADVVARRLGDRVKHWITLNEPWCSAFLGYWTGDHAPGRKEGPALAAAHHLLLGHGLALAALRAAHSDVRAGITLNFSPADPASDSDADRAAAWRYDGFFNRWYLDPLYRSAYPADMLALYAQMGQAPPVQDDDMRIIAAPLDFLGVNYYSRAVIRDDPQAGGLRYAHKRPEGEYTQMDWEVHPASLRRLLERLHRDYAPTTLYITENGAAYPDEVSSDGGVHDPDRVRYIARHLAACHDAIAAGVPLRGYFVWSLMDNFEWAFGYSRRFGIVYVDYATQRRIPKDSALFLRQVIAANALTETQMFTR
>NC_009767.1|WP_012119081.1|678273_679524_+|Gfo/Idh/MocA-family-oxidoreductase
MIRIGIVGCGRILNAHLQGYLQLRRLGIDNFRITALCARRLEDALMFRKRGEGPPPRPPVLDPATGDPLAAPHTYVSDIHDDVEVAVYTDYRDLIASGKVDAINDLTTLALHHQVGLAAIDAGLHLLSQKPLAISVRAAKKMVTAAKARGVTFGVFENVRQARGVRAMAWAVRQGLIGEPQISVMGFLGGLWSPDRVVAETPWRHKKLLGGGGGSIDIGVHQMHLQRYVVGEIAAVSAVARTFAPVRYLRDPQGNVLDQVQADVDDTFMATLQFERGAIGQLWWSWAGSPEEVSISGAPAIIGSKGVIRNGQIVTADGERLPLDETFEQEMTPAERERFFPLGLTDPCAIQNLDWLRAIECGADPETSGEEGLRDLACAFAILESSALGRTVTQQEVLDGAVDAYQRAIDEHYGLL
>NC_009767.1|WP_012119080.1|676417_678277_+|family-20-glycosylhydrolase
MESLSLLPMPQSLTMLPGRYVATSAQRILLQGTAPGDLWFTARRLQNALRAYAGVEWELTATPEGPPGEIGATLRVAADSVIHPQGYALTIKDGGIIIEAPEPAGIFYGVCTLIQIIEQSGRSLPCLHINDHPDFAARGVMIDISRDKVPTMETLLMLTDMLAGWKINQVQLYTEHTFAYRNHPDVWARASPLTGEEVLALDAYCKERFIELVPNQNSFGHMHRWLIHPRYAALAEIHGEFQAPWGVMRGPFSLAPEDPDSLKLVRSLYDELLPHFSSRLFNVGCDETVDLGQGRSRDACAQRGVGRVYLDFLLKLYDAVKQHGRTMMFWGDIVNNHPELIDELPRDLIALEWGYEADHPFDRHCARYAAAGIPFYVCPGTSSWQSIAGRTDNTLGNLRNAAENGLKHGAIGYLITDWGDMGHWQVLPISFLGFAVGAAFAWAYAANRDMNVPAAVSRHAFTDPTGAMGQVAYDLGNVYRAVGYEPPNSSVLFWVLQAPDSDARDLPPLDFDRALDAINAAIQPIAVERMIRPDAPLILQEFDNTVRLLRHACRLGQLLTQPDGAGALPRRRLLNDDMREIIREYERLWLARNRLGGLSDSVARLERVRARYNPQEQTP
>NC_009767.1|WP_012119079.1|675366_676407_+|Gfo/Idh/MocA-family-oxidoreductase
MADKLRVGVLGLTHDHVWSNLRDLASCEDGMLVAAADPNPALREHIRSLGCEQVFDDYSDMLDAVKLDAVYVFSDNLRGAELTEMAAARGLHVMVEKPMAATYADAARMRGAAAAVGVQLMVNWPIMWWPAVQYALNLIAEGRIGQVWQVNYRAAHIGPRELGCSPFFCEWLYDPRRNGAGALMDYCCYGAALTCALLGLPSRVTALTGRLWKPDLLAEDNAVIVMQHARAISTSTASWTQVGDMTSYEPMIYGSEGTIHIREHGRELWLADREHRNGIRLDIPEPPIGMRNSAEYFLGHIRSGKPITGLCSAEVGLMAQEVLEAGILSAAEGRTVSLPLPLTLLA
>NC_009767.1|WP_012119078.1|672822_675333_+|spermine-synthase
MKQAQQTGVVFALFFVSGASGLIDEVVWFRLLSLSFGVSVYAASAVLTAFMGGLALGSWAFGRITARLTQRHKSEATATALLRLFALLLMGVALFAFATPALFSSLTNLYVWIAHRLQPEPFAYHAARTALATLALVPPTFLMGGTLPLLAHLLAVRHRDHGRRLGALYAINTFGGVLGALAAGLVLIPSLGVSGSLYLGGALDLTAAGVAFWLARTWREAPLDPAATPQPAASAPTPTPRHASRPLAQRASGGRAVVAVQAMGASATDAPAAHNGAIATTAMPSASKRALPLPTPARLALIGYTLSGFAALGYQVVWTRTLAIFSLNAVYSFTIMLVTFLIGLAVGSAWMGRRIDRYEQPLALFGWLQIGIGMSAVIALYAFARMPTLLDIFTARTGFLASLWAEFFAAAVIMMMPTLLMGAVFPVAARLYATPPDTDNPVAPDRGGVGARVGRLYALNTVGATLGAFMAGFVFIPLIGLQHSSLLLAMLNLALGAGATLRASPTLGERLRLAGVTGATLLAAALLPPGVYLGFREGVIPELVYYREGVDATVAVFEVKYPPLKMSFVNGRNEVPTDKHSMRAFHVLGHLPALLRPDAQNALMIGFGNGIASGAMATHPLPRIHAVELVAEQVEAARLYEAENRSVLDRPGFQITIEDGRNYLLRSAERYDIITADATHPINSSSWALFTFEFYTMVKSRLTDDGVFVQWLPFHDLSERDYRDIVCTFQRVFPHTTLWYTGATHSFLVATPRPLTRDQVLALDVQLRQSAAGADLGDGRLLAADLIMHEEEVAAFAANGRIVRDDRAFFIPAMDRERILAALEPYARAAARDAGR
>NC_009767.1|WP_012119077.1|671224_672691_+|extracellular-solute-binding-protein
MKIRQYPWILLLGALMLVLAACGGQQGASPTAAPGEAPTTAPASDLPTPTPVIEFAQQPQSGQKVLVWMVRINTVENRWERDVVLPAYQQVAPDVFVKVLNINQDDIAVKREAMIAAKEPLHVWSSNWGGDGFASDRFRGLLADLTPLIERDKWDTSDFIPEVFGIYNVEGKQYGIPFLTTGSYVYYNMKLFDEAGVPYPPSDWNDKSWTWDAFLETAKKLTKNPDDPSTAVYGGVNGLWPPFDSIPMIWGKDPFTAQALETGFSDPIKLDEQTAAAFQAVHDLVYVHKVAPDQAASQALDQLGGAFLSGRVAMFMTGGWGHWNYKDIIDDPNGFCWGAAPLPWGTPDATIRATIFTDPWVVTAGMDAENTDMAWNFVKFLASAEQQRAYTLATGTPPVRQSLLNDYYKQYEKCVPAEKTKESFQGAFSHGRESSNHLLVKFDELSQTWDNLLSPFWNDPNAKASDLMPLLESDVNAALERIRKEAGR
>NC_009767.1|WP_012119076.1|670019_670928_+|carbohydrate-ABC-transporter-permease
MATQTTSSGVRPATPFVRRGLWASKRRREQIVTIISTIIVALGLIIILFPLVWMFSTSLKTRAEVAKFPPVWIPSVPQWDNYRVALTGENRFDIYFKNTLIYAGGAALGETLSCALVAYGFARLRAPGKNALFVLVLATMMLPFWVTLIPQYIIFARLGWIDTYLPLLVPKFFGSAYLIFLLRQFYKTLPKDYEEAALIDGAGYFGIWWRIIVPLSLPAVGAVAIMSFMFHYQDFMGPLLYINSQYNYPVAIGLQQFRAPFGGTAFHLLMAASLVTLIPPMVLFFLAQRYFIQGIVVTGVKG
>NC_009767.1|WP_012119075.1|668972_669980_+|sugar-ABC-transporter-permease
MAVQTAQVPARQKRKPALFGLIPAGKIERREALWFWIFISPWVIGFLAFTLYPIVMSAYYSMTVFNVASPPVWVGFENYLDLFNDRVYWKSLQVTGYYTLLSVPLGIAFGLMLAVLLNQRVPALGVFRTLYYLPALLTGSVAVALLFSWLLNPQFGAINLIIRNLVGPNGLIPLGITGPRWLQDPNWVIPSFTLMSLWGFGGTMLIYLSALQGVPTALYEAAEIDGANRIQQFFNVTVPMISPVILFTFITGVIGAMQQFTAAYVISGGMNLGAPAYSSMFYNLYLFLNAFRRYRMGLASAQAWILLIVILLLTLAMFWASRRYVHYESDEEGAI
>NC_009767.1|WP_012119074.1|667639_668908_+|PQQ-binding-like-beta-propeller-repeat-protein
MHTTGQRGLWMVAILALLGAIGYVALRPPSPASFDAALPAPTVGANLAAQAAPDNPFAQSAPASPDSPPVGEWSMEGLNPARTRAVETPIAPPLNQQRVIVTASFEEGVSPPVIARGLMLLETKDALSAIDLRTGRQRWAYRQKGAYISPAIAGDTVYFRAEQANQGQLVALELSSGRQRWAFTPKRLSAAANNYFGGHLTSPVVVEGVVYVGAGKELYALDAISGKMRWEFSAQDFITSSAAVADGRVFVSDFSYFYAIDLTSGGLIWSYPAHSAVYFSSVAAGDLVLISSGQNLIALDVRNGARRWEKSVSGKSLIPAGAQGDTVFVKTTNELFALDRSDGRELWSFRDVNYVSLPALTQEYVFVVNGMGAGASVVALDMTTGANVWSQPVPRLATTAPVIAGRAIYVRTTDGRVIELLS
>NC_009767.1|WP_012119073.1|666494_667505_+|LacI-family-transcriptional-regulator
MRRRSTIREVASRAGVSYQTVSRVINNSPDVADATREHVLRVIAELDYHPNAQAVSLSRNRTDIVGIIVDTVTSTFFAQTIDGVVKALRRHGRFTLLATVEDATQFDVIDTLQRSRRIDGMVIVLPLANSLSLSRLTPGRVPTVHIDLQYDMDVYGITVNNYRGARLATEHLIDLGHRRIGIITGRHDIPVGQLRLDGYRAALRDHGIPFDPTLIAPGDFSFASGVAGAERLLALDPRPTAIFACNDLMAIGTLHVATRYGLRIPADLSVMGFDDTPEAALACPPLTTMRQPLRAMGEMAADLVCRLIDGEQPEQMRYTVETELVVRFSTGRCPGD
>NC_009767.1|WP_012119083.1|681743_683438_-|formate--tetrahydrofolate-ligase
MRSDLDIAQAARLRPIRAVAADLGLTDDDIELYGRSIAKIDLGILQRLTDQPRGRYIVVTAITPTPLGEGKTTTTIGLGQALARLGKRSVVTIRQPSMGPTFGIKGGAAGGGYSQVLPMEQFNLHLTGDIHAIGAAHNLLAAMIDNHLHHGNQCGIDPYAIFWSRVVDISDRVLRNVVVGLGKKEDGPMRQTQFDITVASEVMAILALTTNLHDLRQRLGRIVAAYTRDGAPVTAEDLHAAGAMTVLLKEAIKPNLLQTLEGSPALVHCGPFANIAHGASSVLADMIGLHCADYVVTESGFGADIGFEKFCDIKCRASGLAPDAVVLVATVRALKAHSGRYTITAGRPLDPRLAEENPEDVADGAANLAAQVRIARLFGRPVVVAINRFPDDFPSEVEVIRQVARESGAFDVVESFVFAEGGAGGCDLARAAIQACEAPGTFTPLYPLDMSLREKIETLATKVYGATRVEYTPEASRRLAQFEHQGYGNLPICMAKTHLSISHDPKLRGAPSGYVFPIRDVRLAAGAGFIYPLAGDIRTMPGLPAHPAAERIDIDAEGRTRGLS
>NC_009767.1|WP_012119084.1|683552_684287_-|VOC-family-protein
MITCIDHIVILVRDLLAAIDDYTALGFTVTPGGVHADGATHNALVAFADGSYLELIAFRREAPDHVWWRFTADGEGLIDFALLPDAIDEDVAAARVRGLEIAGPFAGGRERPDGVRIAWKTARPATPDLPFLCGDVTPRDLRVPTGAARQHANGVTGMARVLVAARDLAESAARYRALLGAEGATSTEGITFLLGSSAIVLVALNEHLRREGLCALELCGGAPGNLDPARTHGASIRIGALSPQ
>NC_009767.1|WP_012119085.1|684594_685563_-|esterase
MPHVAPPALPVVYDARARCVTFFSPALGLSRSFYIYIPPDVDDDHPAPALYLLRGHEREWINPFEDSSRGGRNVIDVYEAQRAAGRIAPLVLVFPGTSSDDNRIPGMLLNMCAPHLAYGASGIGSGRFADYFFHDLIPYVESHFPVIAGGRARGIVGFSLGGAMALSVAARRPDLFACAGAYDGTFLYACNRGRSIRKQDRVVANPIFDAAYGVPRDRAFVAQHNAANLILRGNREALARITWIVAYGPESQEPWQSNYYRGEHLLACLRARGLANALDNPALPDGDHSWRTADRFMNLTLPLYDRALRQESLRAPDCVRHP
>NC_009767.1|WP_012119086.1|685592_688235_-|serine/threonine-protein-kinase
MPEINLIGRTIGRFEILSELGRGGMAVVYKARQTSPNRIVALKVLPPELSLDRTYIARFRQEADSAAALEHPNIVPIYVVDETEGLHYIAMKFIDGRTLKEVIQERGTLPLDETIRLMEQVASALDYAHSRGVIHRDIKPSNMMLDRSGWVYLTDFGLARGTGGGSGLTVTGTVMGTPEYMSPEQAQGLPNVGPPTDIYALGVVIYEMLTGHMPFKADTPLAMLVARLQQAPIPPRDVRSDLPLPVEDVIMRALARKPEARYQSAGELVAALRQAAGLGTGSMRSATPPLSPPVGTPLPYVRTMPTSPPAGTVAPRPQTLPVSPAYGAPAQPPSPPSGVPTIHAAPSESPASGVPTMNVPPGTLPPQQYTTQAPAKPKKGGGMGLIIGGIAALLLLAIGGVFLLRPSDSGGSAQVDAALTQANELFNQRGAFDQAIEAYQQVLNLDATNVDAHTRIALIYQMRSRYTDAEESARAAIAADSRAVLAHAVLAESLHSQGRYNEALDAADEAVAVDPDHPAGYASRAVIKAARALDDADAAMLSEAVDDAEMALDKAAGRENLLQALAHNARGVVYWYQYQFSNDQSMVARGGDEFNRAIGLQGQIAVFHSNLGYFYNDQGANALQRGNRQDAVALLDLARQQFERAQETDPAYGHAHAGLGWNLYYLDDYAGAVAEFDKALSINPQDTDAHLGKSYALLAFSPPDYDGAIATLEQAIAITPYRPDLFARLGWTHMSKGFSLPSGSSEQTSTYQRAEDRFREALDRNDRFVSALTGLGWAQSALGQYEQALDTLQQSLAIKDDQADAHFGVGWTYYNQGRFNDAEVSFRRAIEIAPNDGGNYYWLGLTLEQLGRVEEAKQAYRTAVEKGSRFAQQELDRLGG
>NC_009767.1|WP_083760262.1|688454_689633_+|MFS-transporter
MIVSRILSMTVRTSLQARATHLLIAPKAFYFFWFVALGSFMPFITLHYRSIGLDLAQIGVLLSLGGFLQIISPLWGLVADALRLRRLLLPVVIAGAVLPALLLGVTTDFWLIFALVTMMSLFFAPVAPLADSATLAALGNARERYGSQRVWGAVGWGLSTIAFGWAVERMGLGLIFWVYPIAGMLAALAALAMPRAELVTVNVAQAARRLLRDGRWARFLIGAMLIGCSGALMHGFFSLYMEDLGAGGEQIGLAYTIASISELPVMALSAFAIRRWGSRRLIIAAGGVYAVRMALYWAAPAPEWALAIQLLHGLCFASLWKSGVVEAQRLAPPGLEATAQSLFGMSVFGVAVALANTVGGVIYRDYGYGALFAAAALVAALGAFILALGREG
>NC_009767.1|WP_012119088.1|689668_691735_-|S8-family-serine-peptidase
MQRLLVFVALIFTLAPLPKPIAASDAADELVVRLAEGWALTASARVHGPFAAPLNALLAQADVREAQALGGGAYLLRFAHSFNHRTMIARLIRTPGVVYAERNHERQVLRVPNDEDIDRQWSLAVIQAFDAWNITTGSDIIIAILDTGVSPSHPDLRGRVLPGFDFVNNDDDPRDDDGHGTFTAGVAAAEGDNGIGAAGVCWRCRILPVKVLNRRGRGNDAAIAAGIRFAVDRGARIISMSFGGPDDSRVLREAVAYALERDVLLVAASGNGQAEGNLPNYPAAYPGVLAVSATGPDDAVTSFSTTGDFVALAAPGAGVWSTTWRRPTGDTYGFADGTSAACPHVAGAVALVWTVRPELAARQVAEVLMLGADDRGAPGKDPAYGYGRLNLFRALQVALDPNLLIRSRIEGVVRSVAPDQTTITLSSGQETRPDPNGFYRFENLPAGQYTIIARTPSGESLQHEVSLTGTALSVARVDFALDSAAVAGAAFAPVSPQRGAVYFPETGHTLRGVFLSYWRAHGGLPVFGYPISEEFIERGEDGREALVQYFQRHRFELRPENRPPYNVQLSRMGDIILRARGVDWFALPKGAPTSGCRYFPETGHSLCEPFLSAWRSNGLEFDRRRGASEAENLALFGMPISEPQIETLPDGRLILVQWFERARFEDHGPDGILFGLLGEELARVRGWR
>NC_009767.1|WP_012119089.1|691873_692809_+|GlcNAc-PI-de-N-acetylase
MATHVTHNLTAYGIDSRWLRDHRSERRILFVYAHPDDESFGNAGTILRYTRDGVDVHYACATRGEAGDVPPEMLAGYADVGALRTVEQMCAAGALGLTGVHFLGHRDSGMAGSPDNQHPAALIRQPLTNVAGQIVALIRAIRPQIVVTFGPYGGYGHPDHIFCHRAATAAFEAAGNPILYPEQVNMGLDPWQPQRLYYSTFGTRFLSSVVIVMRLLGKDPARFGRNGDVDLVRAAREATPVTTSIDTSACFEQAMQARACHHSQGGGIGWLRRLPKPIQRRLNAVEHFTRVVPPWNGGAVEQDLFPRDQSP
>NC_009767.1|WP_012119090.1|692994_693528_+|hypothetical-protein
MAVTSKDLRNNARLSASRPLTIVPRVGVNSVMYLITGLLALLAIYAVMGNVVGWGRERLDDLRYGATRTFHAQAVVGHDDNPATPSHFVAMNLNRQVVVIYMPGGDSTKTRVITGPYLFGAGEDKTPVLLDFADLNNDGALDMLVKVKNEAIVYLNRNGQFEPISAEDRALLMEMRR
>NC_009767.1|WP_012119091.1|693781_695659_+|ABC-transporter-ATP-binding-protein
MWDVPGRRRARRPFEPETAATWSERMAQIRDAFGNIPGAFRLVWRADRRSTIMMAILTLIAAALPAAQAWAGALIVDSVVNSFTARVDPLIGLEHALPFLGFELTLLLIGAASTQMRTFYEHVLNARLAHTINTEIIRKALALDLHYFEDASFYDKLQNARREADFRALGIINGSYNVVQNLLTLLSFAALLLAFSPLITLVLFGATIPAFVAQGRFSNLYFRLLTWRAPEFRRMQYLEHVLTVDSSVKEVKLFNLGEPLLKRYHDAFHVFFREDVDLARRRSFISVGLGALASLSYYGAYAWIVFLTIGGAITLGGMTFYLTLFRQSQGAFQGLFGSVTRLYEHGLFMENLFTFLGLQPQMTSAAQPVPVPPQLQRGLEFRNVSFRYPGRDDWALREINLTIAPGEKLALVGPNGAGKTTLIKLMTRLYDPTEGQILLDGVDLRDYDLDEVRRRIGVIFQDFVRYQLTVRENIGFGQIDHLDDAQRIGAAAQRGGADDVVAVLPGGMETMLGRWFENGFELSGGQWQKIALSRAFMRDGEVLVLDEPTAALDAEREYEIFQRFRELTAGKIAVLISHRFSTVRMADRIAVIEGGRITEIGSHAELLARGGTYARLFEMQAEGYR
>NC_009767.1|WP_012119092.1|695659_698479_-|hypothetical-protein
MLTAVLTYWFAALAFGIVGMPAARLLFGALPDRGYAFARTVGLLLTGYLAWLAAMFGLASFGAPLIVVAALAVVIGGVLALRRVSAKAASPAVALRWVRRNWGIVVFYEALFAAALIFLALLRAQEYGFVGPHPWGTERPMDYAFFNAIRVSAVFPPHDPWMSGYSINYYYFGYLLMAAVSLVTGVHPAVGYNMSLALTFALTALGIAGLITNLVALATSQLPDAPRATDVEVERVDADATPYSDGMASLSRMQAAFAVPLDRGASWFWGMRRASTQQQMTAQQASTELAEQSPSTQASADVEADMPDGQALPNSEGERAPEIDGAPPDAHRCIPWHGWLAALLTVVAVLLAGNQAGTLQVIVGNERIVALDGAQLAAALVQALSGAETITLPYPARTGDFNVFDTLIREDRMRDFNWWWPSRAVWDERPVWNPETQQIEPVRGYAITEFPFFSFWLGDMHPHVMALPFGVLALALALALLASSAPLRLWRNRAELLLSGVILGSLYMINSWDLPTYLLLFLGVLALKTATQPETPAISGEAASGVPLIDRLAPRWRGYLINALLILATSVVLIAPFLLTFTSLIGGRAPLIDLPLIGEMTRILGFVTGKTGLHSFLIIFGTFLAPLIGLTAALARGTARTLLIASGVTVVIGAFIGFPLAALLPLGLAATLIAGQRAGHPADAFALGTLALGSAICLGVELVYIRDVFENRMNTIFKFYYQTWLIWGVAGGYAAWRLMQIVGICWRAQPRRSARIAAMLAMPLVALILLASGLTYPWLTAGKAFAEGRHVGLEGRTPRERTPEGAEAIAWVRANTPGDAVILEAVGPSYDTAGIGYGGVSSSTGRATVMGWEGHQQQWRGGDPKVLAEIAPRATDVATIYSTADTALVRALLAIYGVDYIYVGEAERQTYPAEGLAKLSTLGDVVFQNDEVTIYRVRP

Crispr_ID: NC_009767_12

• CRISPR_ID: NC_009767_12
• CRISPR_location: 708257-708503
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_009767_12

Consensus_repeat	Method
CCCGACCAAGGCGTAGCGCGAGATGTATCTCGCATT	CRT

spacers of NC_009767_12

>12.1|708293|34|NC_009767|CRT
GGTGGAGAGGCAAGAGGCGAGAGGCAAGAGGCGG
>12.2|708363|35|NC_009767|CRT
TGGGGAGAGTTGTGAGAGAGGCGAGGTGAGAGAGT
>12.3|708434|34|NC_009767|CRT
GGTGGAGAGGCAAGAGGCGAGAGGCAAGAGGCGG

CRISPR arrays and Neighbor proteins around NC_009767_12

CRISPR arrays

The CRISPR arrays of NC_009767_12

>merge|NC_009767|12|708257-708503|CRT
CCCGACCAAGGCGTAGCGCGAGATGTATCTCGCATTGGTGGAGAGGCAAGAGGCGAGAGGCAAGAGGCGGCCCGACCAAGGCGTAGCGCGAGATGTATCTCGCATTTGGGGAGAGTTGTGAGAGAGGCGAGGTGAGAGAGTCCCGACCAAGGCGTAGCGCGAGATGTATCTCGCATTGGTGGAGAGGCAAGAGGCGAGAGGCAAGAGGCGGCCCGACCATGGCGTAGCGCGAGATGTATCTCGCATT

>NC_009767|12|1|708257-708503|CRT
CCCGACCAAGGCGTAGCGCGAGATGTATCTCGCATT	GGTGGAGAGGCAAGAGGCGAGAGGCAAGAGGCGG
CCCGACCAAGGCGTAGCGCGAGATGTATCTCGCATT	TGGGGAGAGTTGTGAGAGAGGCGAGGTGAGAGAGT
CCCGACCAAGGCGTAGCGCGAGATGTATCTCGCATT	GGTGGAGAGGCAAGAGGCGAGAGGCAAGAGGCGG
CCCGACCATGGCGTAGCGCGAGATGTATCTCGCATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119085.1|684594_685563_-|esterase	unknown	unknown	gnl|CDD|223700
NC_009767.1|WP_012119088.1|689668_691735_-|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173810
NC_009767.1|WP_012119098.1|715631_715979_-|hypothetical-protein	unknown	unknown	gnl|CDD|375906
NC_009767.1|WP_012119096.1|714141_714810_+|biotin/lipoyl-binding-protein	unknown	unknown	gnl|CDD|273776
NC_009767.1|WP_157042519.1|717896_718043_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119089.1|691873_692809_+|GlcNAc-PI-de-N-acetylase	unknown	unknown	gnl|CDD|274584
NC_009767.1|WP_012119093.1|699418_707458_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274708
NC_009767.1|WP_157042518.1|717033_717360_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330150.1|717514_717745_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119095.1|711742_713056_-|hypothetical-protein	unknown	unknown	gnl|CDD|223021
NC_009767.1|WP_012119084.1|683552_684287_-|VOC-family-protein	unknown	unknown	gnl|CDD|379203
NC_009767.1|WP_012119090.1|692994_693528_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119091.1|693781_695659_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NC_009767.1|WP_012119092.1|695659_698479_-|hypothetical-protein	unknown	unknown	gnl|CDD|274708
NC_009767.1|WP_012119099.1|715979_716225_-|DUF433-domain-containing-protein	unknown	unknown	gnl|CDD|377269
NC_009767.1|WP_012119094.1|708953_710219_-|hypothetical-protein	unknown	unknown	gnl|CDD|237057
NC_009767.1|WP_012119101.1|718771_719992_-|AMP-binding-protein	unknown	unknown	gnl|CDD|341239
NC_009767.1|WP_012119086.1|685592_688235_-|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009767.1|WP_157042517.1|715271_715478_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_083760262.1|688454_689633_+|MFS-transporter	unknown	unknown	gnl|CDD|340893

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119088.1|689668_691735_-|S8-family-serine-peptidase	gnl|CDD|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	1.58116e-103
NC_009767.1|WP_012119098.1|715631_715979_-|hypothetical-protein	gnl|CDD|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	2.48935e-18
NC_009767.1|WP_012119096.1|714141_714810_+|biotin/lipoyl-binding-protein	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	9.08322e-14
NC_009767.1|WP_012119089.1|691873_692809_+|GlcNAc-PI-de-N-acetylase	gnl|CDD|274584	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase, also called 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species. [Cellular processes, Detoxification].	1.45157e-49
NC_009767.1|WP_012119093.1|699418_707458_-|tetratricopeptide-repeat-protein	gnl|CDD|274708	TIGR03662, Chlor_Arch_YYY, Chlor_Arch_YYY domain. Members of this highly hydrophobic probable integral membrane family belong to two classes. In one, a single copy of the region covered by this model represents essentially the full length of a strongly hydrophobic protein of about 700 to 900 residues (variable because of long inserts in some). The domain architecture of the other class consists of an additional N-terminal region, two copies of the region represented by this model, and three to four repeats of TPR, or tetratricopeptide repeat. The unusual species range includes several Archaea, several Chloroflexi, and Clostridium phytofermentans. An unusual motif YYYxG is present, and we suggest the name Chlor_Arch_YYY protein. The function is unknown.	7.42029e-153
NC_009767.1|WP_012119095.1|711742_713056_-|hypothetical-protein	gnl|CDD|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	2.4469e-08
NC_009767.1|WP_012119084.1|683552_684287_-|VOC-family-protein	gnl|CDD|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	5.30194e-41
NC_009767.1|WP_012119085.1|684594_685563_-|esterase	gnl|CDD|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	2.14733e-12
NC_009767.1|WP_012119091.1|693781_695659_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	5.87625e-113
NC_009767.1|WP_012119092.1|695659_698479_-|hypothetical-protein	gnl|CDD|274708	TIGR03662, Chlor_Arch_YYY, Chlor_Arch_YYY domain. Members of this highly hydrophobic probable integral membrane family belong to two classes. In one, a single copy of the region covered by this model represents essentially the full length of a strongly hydrophobic protein of about 700 to 900 residues (variable because of long inserts in some). The domain architecture of the other class consists of an additional N-terminal region, two copies of the region represented by this model, and three to four repeats of TPR, or tetratricopeptide repeat. The unusual species range includes several Archaea, several Chloroflexi, and Clostridium phytofermentans. An unusual motif YYYxG is present, and we suggest the name Chlor_Arch_YYY protein. The function is unknown.	1.02044e-93
NC_009767.1|WP_012119099.1|715979_716225_-|DUF433-domain-containing-protein	gnl|CDD|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	1.47858e-24
NC_009767.1|WP_012119094.1|708953_710219_-|hypothetical-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	1.14206e-08
NC_009767.1|WP_012119101.1|718771_719992_-|AMP-binding-protein	gnl|CDD|341239	cd05913, PaaK, Phenylacetate-CoA ligase (also known as PaaK). PaaK catalyzes the first step in the aromatic degradation pathway, by converting phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Phenylacetate-CoA ligase has been found in proteobacteria as well as gram positive prokaryotes. The enzyme is specifically induced after aerobic growth in a chemically defined medium containing PA or phenylalanine (Phe) as the sole carbon source. PaaKs are members of the adenylate-forming enzyme (AFE) family. However, sequence comparison reveals divergent features of PaaK with respect to the superfamily, including a novel N-terminal sequence.	5.7673e-91
NC_009767.1|WP_012119086.1|685592_688235_-|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.16734e-119
NC_009767.1|WP_083760262.1|688454_689633_+|MFS-transporter	gnl|CDD|340893	cd17335, MFS_MFSD6, Major facilitator superfamily domain-containing protein 6. Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.36438e-74

Protein sequences

>NC_009767.1|WP_012119093.1|699418_707458_-|tetratricopeptide-repeat-protein
MNTTPVSPDNPPARRLSWSPWGWLALILFVGTFFRSMALTTWDGTSYLHPDERFIIFTAYNLQVPRSFSDYLRSDCAINGRIPAARATTDGAGNPIPLNQQEPTRDSGCNTLNPRNYNWSRFFVYGTLPTTVTRVAVELQANLSGRADRISPEMVRDTGRTLSMLYDLGTIVIVFLIGRRLFDRRAGLIASLLYATAAFPIQMSHFFTVDAATTFFTTLSIYWAVRIAQGGGVGSAIGAGLSIGAAMACRVTLATLGLAVIVAAFARLAEETGRQYADGETPGILARLLTAPTRMLFALAWRVALAGVITVVAFRLLQPDAFTGPSLFDVRPEPRFLDNISSVGRLISGEADFPPSQQWAQRTPFLFSLQNMVLWGMGLPLGMAAWGAWLAAGWRIVRRGDVRLLVLWAWIAFYFAWQGGQFVMTMRYYVLLYGLLIVLAAGGLLALWDRAQCAVGPRWRRIAWRAPLIVAVAGTALWAFAFTRIYTEPHSRIQASRWIYQNIPPGAVITFERWDDPLPLPIDGQNPGQYIGIGTEPYGEDEPLKYYGYIASDGSAVEGLLDQLDRADYLIFSSNRVYDSATRLPMRYPALSRYYYHLFEGNLGFELVADIYSFPKLFGIEIPTPILAEEAFSVYDHPRVLIFRKTADYSRARAEQLILGDVAWGEVYKITTLRVNKAPTALRLTQDQWSLYRTAGDWATLFNPASAAHAVPWLFWILAIEALGMACFALVFRRMATLPDRGYALSKILGLLIVSYAAWLLASVGPSGAHGTLQAPLVPFGKWSVVLCAIAFVGAGALALRRNRALIAAFWQQRRTAILTAEGVFLAFFFGFLLLRALNPDLWHPARGGEKPMDLAFLTAVVKSPAFPPYDPWFAGGYLNYYYFGFVLVATLIHLTGIVPTTAYNLAVPTFAALTAIGAWGAAYNLVALRKRLTPDVALEPQPHTRWQRWFAAVVSRSAVWQTYERRAMIAGVAAALFAVLAGNLAQAVWFFPGAGNAQDPGLPETCRALASYAAQQECRGRAEWAFWDATRLVAMRLGDGTINEFPFFTFLFADLHAHMLALPLILAALNLIVAVVRHPGNRPQTLRSLAFSPLAVVILLLALTVGALYATNTWDYPTAAGLGALGLAVYAWNRYQRGLSPQRALTLWIALTAVLVVLSRLLFLPFIQRFATDYAGFEWWNGSRTPTSEFLQIHGLWLFLAVSGALALAYLTGRLSARVAAAIGGGLIVLAALMATLSIPALPLQALLLAGGILLLADMLLRAGVVAPSGAEEAVEQAGPVQLTLPGIVDDPPARATSNALHPGAGATRLFVLLLGLAALGITFLIEIVVAKGDIGRMNTVFKFGMQVWLLFAVVSGVALSWMWSATAAWRSGALSWGWRAAVALLIAAAFVYPLTATPARLADRYDSTIGPTLDGMAFMRSPRSGWAENDRNFTFAEDAAALEWLRANVRGTPIVLEAHLEAYRWGGRVSVYTGLPTLLGWPWHMTQQRSVADSGPVIEARKMVIRDLYNDPNTGETLRMLRLYGIEYVIVGRLERALYDPAGLAKFDALAAAGQIEMVYRAGETRIYHVPPADHPPAVLTTSLPVRAPAPAPQNDLMLPMRVGELPAVEMHGWNRLADNPAIAVLLWLLAWYVLAALGLPVAMLVFGARAPDGGWLWARPIGMLLFGYAIWLPVSARLWQYDMAGMIIGALLALTVSGAALATLGKRRMRQEIVAPPSSTLVLDLRRGLWALRDMLRERWRWIAGGEALFLSAFAFMLALRWLNPDLWQPIWGGEKPFEFGFLNALIRTPVLPPYNPFYSDGVINYYYYGFFLMSLPVRLTGIAPEVAYNLIVPTLFGLMLSAVFAVIVRIRGLWRWGVAGALLVGVAGNLAAVVPANWARGVAPVIAALTEGLPGFGERLGDWFVGPTRVIPFTINEFPYFSFLFADLHPHTIALPLTVLMMALTFEALVAQPGAWQERFARWGMTALTLGALAVTNSWDFPTYGLLLGGTLLGRAWRESQRFDWRLAARLGGAALGGVALGGVALALYLPFFQNFRAMVSGINPVRDATHLSDYLLLYGIFLAPLVVVLFGAAWQALHITFRRAQRAHLSTMGASPEATGFVAGAPGAPGMGRVPLALLILTGGIVVVTGAVTLLPPLLLALRLEGLATAFGIAAERLAPLTLRIWLVALLAITVGMALVRALRPGTWFAFWSLGVALIVSLLCEILYVRDHLDGGDWYRMNTVFKFGLQAWVLLAMATTLLLPAFLRALRRRGAAAQAVGYGALIALLLLAAVYPVVGTASRTAYRFPGNTTGPTLDGLAFMERESFPLPAYLQPTGAPPVIIPLRYDYEAIRWLDQNVEGTPVVLQSSIEFYRAYGVRVAANTGFPTIVSPLHESEQRDPQAVYRRDLDVAQIYRTTDAREALRLLSRYQVRYIYVGPIERAVYGDAGLLKFQQMTGSFLEIAFRNDQATIYRVNDHVHTLPMLPPLNRPAPAQAAPLPVEEEESIAPEPMAPVVPPDDDLRNPAVIAELERQVQVNPGDAGPAYALAEQYRALGRFEDAVAVLRPAARANPNDVALHHLFGDVLIDAGRFDEAIEAYRAAVSASPVAGNYNKLGVGLLTIGRPGDAEREFLQAIAVDPTLPEPYFRLGTLYEQRGDERLAIQRYREYLEIAPDGYLAPLAREALERLTSTP
>NC_009767.1|WP_012119092.1|695659_698479_-|hypothetical-protein
MLTAVLTYWFAALAFGIVGMPAARLLFGALPDRGYAFARTVGLLLTGYLAWLAAMFGLASFGAPLIVVAALAVVIGGVLALRRVSAKAASPAVALRWVRRNWGIVVFYEALFAAALIFLALLRAQEYGFVGPHPWGTERPMDYAFFNAIRVSAVFPPHDPWMSGYSINYYYFGYLLMAAVSLVTGVHPAVGYNMSLALTFALTALGIAGLITNLVALATSQLPDAPRATDVEVERVDADATPYSDGMASLSRMQAAFAVPLDRGASWFWGMRRASTQQQMTAQQASTELAEQSPSTQASADVEADMPDGQALPNSEGERAPEIDGAPPDAHRCIPWHGWLAALLTVVAVLLAGNQAGTLQVIVGNERIVALDGAQLAAALVQALSGAETITLPYPARTGDFNVFDTLIREDRMRDFNWWWPSRAVWDERPVWNPETQQIEPVRGYAITEFPFFSFWLGDMHPHVMALPFGVLALALALALLASSAPLRLWRNRAELLLSGVILGSLYMINSWDLPTYLLLFLGVLALKTATQPETPAISGEAASGVPLIDRLAPRWRGYLINALLILATSVVLIAPFLLTFTSLIGGRAPLIDLPLIGEMTRILGFVTGKTGLHSFLIIFGTFLAPLIGLTAALARGTARTLLIASGVTVVIGAFIGFPLAALLPLGLAATLIAGQRAGHPADAFALGTLALGSAICLGVELVYIRDVFENRMNTIFKFYYQTWLIWGVAGGYAAWRLMQIVGICWRAQPRRSARIAAMLAMPLVALILLASGLTYPWLTAGKAFAEGRHVGLEGRTPRERTPEGAEAIAWVRANTPGDAVILEAVGPSYDTAGIGYGGVSSSTGRATVMGWEGHQQQWRGGDPKVLAEIAPRATDVATIYSTADTALVRALLAIYGVDYIYVGEAERQTYPAEGLAKLSTLGDVVFQNDEVTIYRVRP
>NC_009767.1|WP_012119091.1|693781_695659_+|ABC-transporter-ATP-binding-protein
MWDVPGRRRARRPFEPETAATWSERMAQIRDAFGNIPGAFRLVWRADRRSTIMMAILTLIAAALPAAQAWAGALIVDSVVNSFTARVDPLIGLEHALPFLGFELTLLLIGAASTQMRTFYEHVLNARLAHTINTEIIRKALALDLHYFEDASFYDKLQNARREADFRALGIINGSYNVVQNLLTLLSFAALLLAFSPLITLVLFGATIPAFVAQGRFSNLYFRLLTWRAPEFRRMQYLEHVLTVDSSVKEVKLFNLGEPLLKRYHDAFHVFFREDVDLARRRSFISVGLGALASLSYYGAYAWIVFLTIGGAITLGGMTFYLTLFRQSQGAFQGLFGSVTRLYEHGLFMENLFTFLGLQPQMTSAAQPVPVPPQLQRGLEFRNVSFRYPGRDDWALREINLTIAPGEKLALVGPNGAGKTTLIKLMTRLYDPTEGQILLDGVDLRDYDLDEVRRRIGVIFQDFVRYQLTVRENIGFGQIDHLDDAQRIGAAAQRGGADDVVAVLPGGMETMLGRWFENGFELSGGQWQKIALSRAFMRDGEVLVLDEPTAALDAEREYEIFQRFRELTAGKIAVLISHRFSTVRMADRIAVIEGGRITEIGSHAELLARGGTYARLFEMQAEGYR
>NC_009767.1|WP_012119090.1|692994_693528_+|hypothetical-protein
MAVTSKDLRNNARLSASRPLTIVPRVGVNSVMYLITGLLALLAIYAVMGNVVGWGRERLDDLRYGATRTFHAQAVVGHDDNPATPSHFVAMNLNRQVVVIYMPGGDSTKTRVITGPYLFGAGEDKTPVLLDFADLNNDGALDMLVKVKNEAIVYLNRNGQFEPISAEDRALLMEMRR
>NC_009767.1|WP_012119089.1|691873_692809_+|GlcNAc-PI-de-N-acetylase
MATHVTHNLTAYGIDSRWLRDHRSERRILFVYAHPDDESFGNAGTILRYTRDGVDVHYACATRGEAGDVPPEMLAGYADVGALRTVEQMCAAGALGLTGVHFLGHRDSGMAGSPDNQHPAALIRQPLTNVAGQIVALIRAIRPQIVVTFGPYGGYGHPDHIFCHRAATAAFEAAGNPILYPEQVNMGLDPWQPQRLYYSTFGTRFLSSVVIVMRLLGKDPARFGRNGDVDLVRAAREATPVTTSIDTSACFEQAMQARACHHSQGGGIGWLRRLPKPIQRRLNAVEHFTRVVPPWNGGAVEQDLFPRDQSP
>NC_009767.1|WP_012119088.1|689668_691735_-|S8-family-serine-peptidase
MQRLLVFVALIFTLAPLPKPIAASDAADELVVRLAEGWALTASARVHGPFAAPLNALLAQADVREAQALGGGAYLLRFAHSFNHRTMIARLIRTPGVVYAERNHERQVLRVPNDEDIDRQWSLAVIQAFDAWNITTGSDIIIAILDTGVSPSHPDLRGRVLPGFDFVNNDDDPRDDDGHGTFTAGVAAAEGDNGIGAAGVCWRCRILPVKVLNRRGRGNDAAIAAGIRFAVDRGARIISMSFGGPDDSRVLREAVAYALERDVLLVAASGNGQAEGNLPNYPAAYPGVLAVSATGPDDAVTSFSTTGDFVALAAPGAGVWSTTWRRPTGDTYGFADGTSAACPHVAGAVALVWTVRPELAARQVAEVLMLGADDRGAPGKDPAYGYGRLNLFRALQVALDPNLLIRSRIEGVVRSVAPDQTTITLSSGQETRPDPNGFYRFENLPAGQYTIIARTPSGESLQHEVSLTGTALSVARVDFALDSAAVAGAAFAPVSPQRGAVYFPETGHTLRGVFLSYWRAHGGLPVFGYPISEEFIERGEDGREALVQYFQRHRFELRPENRPPYNVQLSRMGDIILRARGVDWFALPKGAPTSGCRYFPETGHSLCEPFLSAWRSNGLEFDRRRGASEAENLALFGMPISEPQIETLPDGRLILVQWFERARFEDHGPDGILFGLLGEELARVRGWR
>NC_009767.1|WP_083760262.1|688454_689633_+|MFS-transporter
MIVSRILSMTVRTSLQARATHLLIAPKAFYFFWFVALGSFMPFITLHYRSIGLDLAQIGVLLSLGGFLQIISPLWGLVADALRLRRLLLPVVIAGAVLPALLLGVTTDFWLIFALVTMMSLFFAPVAPLADSATLAALGNARERYGSQRVWGAVGWGLSTIAFGWAVERMGLGLIFWVYPIAGMLAALAALAMPRAELVTVNVAQAARRLLRDGRWARFLIGAMLIGCSGALMHGFFSLYMEDLGAGGEQIGLAYTIASISELPVMALSAFAIRRWGSRRLIIAAGGVYAVRMALYWAAPAPEWALAIQLLHGLCFASLWKSGVVEAQRLAPPGLEATAQSLFGMSVFGVAVALANTVGGVIYRDYGYGALFAAAALVAALGAFILALGREG
>NC_009767.1|WP_012119086.1|685592_688235_-|serine/threonine-protein-kinase
MPEINLIGRTIGRFEILSELGRGGMAVVYKARQTSPNRIVALKVLPPELSLDRTYIARFRQEADSAAALEHPNIVPIYVVDETEGLHYIAMKFIDGRTLKEVIQERGTLPLDETIRLMEQVASALDYAHSRGVIHRDIKPSNMMLDRSGWVYLTDFGLARGTGGGSGLTVTGTVMGTPEYMSPEQAQGLPNVGPPTDIYALGVVIYEMLTGHMPFKADTPLAMLVARLQQAPIPPRDVRSDLPLPVEDVIMRALARKPEARYQSAGELVAALRQAAGLGTGSMRSATPPLSPPVGTPLPYVRTMPTSPPAGTVAPRPQTLPVSPAYGAPAQPPSPPSGVPTIHAAPSESPASGVPTMNVPPGTLPPQQYTTQAPAKPKKGGGMGLIIGGIAALLLLAIGGVFLLRPSDSGGSAQVDAALTQANELFNQRGAFDQAIEAYQQVLNLDATNVDAHTRIALIYQMRSRYTDAEESARAAIAADSRAVLAHAVLAESLHSQGRYNEALDAADEAVAVDPDHPAGYASRAVIKAARALDDADAAMLSEAVDDAEMALDKAAGRENLLQALAHNARGVVYWYQYQFSNDQSMVARGGDEFNRAIGLQGQIAVFHSNLGYFYNDQGANALQRGNRQDAVALLDLARQQFERAQETDPAYGHAHAGLGWNLYYLDDYAGAVAEFDKALSINPQDTDAHLGKSYALLAFSPPDYDGAIATLEQAIAITPYRPDLFARLGWTHMSKGFSLPSGSSEQTSTYQRAEDRFREALDRNDRFVSALTGLGWAQSALGQYEQALDTLQQSLAIKDDQADAHFGVGWTYYNQGRFNDAEVSFRRAIEIAPNDGGNYYWLGLTLEQLGRVEEAKQAYRTAVEKGSRFAQQELDRLGG
>NC_009767.1|WP_012119085.1|684594_685563_-|esterase
MPHVAPPALPVVYDARARCVTFFSPALGLSRSFYIYIPPDVDDDHPAPALYLLRGHEREWINPFEDSSRGGRNVIDVYEAQRAAGRIAPLVLVFPGTSSDDNRIPGMLLNMCAPHLAYGASGIGSGRFADYFFHDLIPYVESHFPVIAGGRARGIVGFSLGGAMALSVAARRPDLFACAGAYDGTFLYACNRGRSIRKQDRVVANPIFDAAYGVPRDRAFVAQHNAANLILRGNREALARITWIVAYGPESQEPWQSNYYRGEHLLACLRARGLANALDNPALPDGDHSWRTADRFMNLTLPLYDRALRQESLRAPDCVRHP
>NC_009767.1|WP_012119084.1|683552_684287_-|VOC-family-protein
MITCIDHIVILVRDLLAAIDDYTALGFTVTPGGVHADGATHNALVAFADGSYLELIAFRREAPDHVWWRFTADGEGLIDFALLPDAIDEDVAAARVRGLEIAGPFAGGRERPDGVRIAWKTARPATPDLPFLCGDVTPRDLRVPTGAARQHANGVTGMARVLVAARDLAESAARYRALLGAEGATSTEGITFLLGSSAIVLVALNEHLRREGLCALELCGGAPGNLDPARTHGASIRIGALSPQ
>NC_009767.1|WP_012119094.1|708953_710219_-|hypothetical-protein
MSDTPRNPLSPAAVRSLLNAATRLRQQGDIRRARILLRALATQHPNNPWVWRALADVAENEQERRAALRRIVALVRSTATPGAAPAEPSSTMAQPPPPASSSASVASMPATQPGAAPRDSATAPTASLPPSPPALPSSPGAPRITPPAPASLSTASAGASSAPAERTIPPQPTPTAPLSFSRYNWIGIAAIGASLLIVAALLTNARFPGGAIRPTSTLILATPEPVGGPASSTPSPNLPASSLTTVPATPAALRESPVATIAPTGAPSPPATLTPLPTSTPLPTLPVGTVILRDAWTLTLLRPDHTLVLNGAIGSRQPDGRFVLALVAVGNGGDAAIPAPPELFVLIDDQGNRYLPEPALSTLYLETFGRGRYGDFSLDEAIPPRIGQVSVPVIFDVPVGARGLTLHLGDSVAGWPVLGLP
>NC_009767.1|WP_012119095.1|711742_713056_-|hypothetical-protein
MAEPETLLQLGIEAAREGNREEARNLFSLLTRQEPDNVQAWLWLAGVAEGPEQRRAALERVIALDPNNEMAIKGLQAMGAPLPKRESERPTEAPPSPPPASEAQAKPASPMTDEEKFAAELDSAFDDYDALPRATPPPRADTPPEDAGKLPPMPPRSSPTPPRSSPTPPRSSPARARDEDEEEEPARRGPSPLLWILLGVIALVLIVFLIIQLFFPPGGGPAPTPPTQVVEQPTTAPGAGGEAATPEGGAVPPVAEVTPQPSEATPETTPGVEPTVAPPTEQPTPEPAPVTPPEQAQPAPAAIGTILQADGWNYTYPNQLYALSLGPKVGNFTAEQGTFLHVLVFVANNTGTNQPLPRDFFVLKDAQGRVYQARPEVSSAAVRPGVNADVGHETPIPANGLTTSVYLVFDVAPGATDLMLFARNKPDQGFIVIGRVP
>NC_009767.1|WP_012119096.1|714141_714810_+|biotin/lipoyl-binding-protein
MIHPAFAFSEESFATVVPEKSIIERLDMQATSSVPHAGGVQRQRLSRRRMLWIVLLLLILVGIGGIAWRATTVAPVPAATAPVLRETLTETVSGSGSVQPARALDVVFVASGEVAEVLVEVGDVVRAGQSLARLDTTELELQLAQAEANLKSAEARLAAARGEGASELDIRQAQLSLQAAEIQLAKVSKGNATAANIRSAQANLESARAPCSAVGGVAAADG
>NC_009767.1|WP_157042517.1|715271_715478_+|hypothetical-protein
MVHVWRRFRDRTINRAMLQVAMGPVRATFHTLLVQRTRRWSASDGMDQALLDHEDTRSGRLPARSGSI
>NC_009767.1|WP_012119098.1|715631_715979_-|hypothetical-protein
MRFLVDECTGPAVVRWLHEQQHDVFSVYDEARGMDDDDVIAKAYSENWILITNDKDFGEEVYREKRLHRGVVLLRLEDERAASKIAVLQRLLGGYAEQLADRFVVVTERQVRFAQ
>NC_009767.1|WP_012119099.1|715979_716225_-|DUF433-domain-containing-protein
MKEQQLLERITLNPKVMAGKPVIRGTRLTVEYILNLLAHGATISEILEEYNGLTHEDIQACLLFATKALASTSFMPLGESA
>NC_009767.1|WP_157042518.1|717033_717360_-|hypothetical-protein
MTEVIEHGQGVRLAAAELRDECQHRRRLIGEPGGRCSTMAQWSRSARVQQAQAKNLERIPAFASSRPAGGEMRSSQATLRSSRRPSSAAHCQFRAVRQTTQPALAQVQ
>NC_009767.1|WP_041330150.1|717514_717745_+|hypothetical-protein
MRTAMASRAPGANRSFRLTGAFPRSVEPPGARLIASLRTGESVQISAGIRAVFSASAADSVIATLRQTLDKLGTAG
>NC_009767.1|WP_157042519.1|717896_718043_-|hypothetical-protein
MSIVVRLGDGLRNVIDPRLCSGRNRCEVARQPEAAQKWQMQRPLQVAW
>NC_009767.1|WP_012119101.1|718771_719992_-|AMP-binding-protein
MDIGAFYAGFDQRVRDIVAYGYDRSPAFRRRMEAAGLTPDDIQTTADLARLPILRKEQLVEIHRQGPGLGGMLTVPLSALRRIFQSPGPIYDPEPDEPDSWRWAPAFRAAGFAPGDIVLNCFGYHLTPAGVMFEEGARAIGCTVIPAGIGNQAQQIDAMAHLGVTAYAGLPSYLKALLERATEQGHDPRSWTLNKAFVAAEPLPPSLRALFEEQYGILVYDGYGAAETGNLGYNGPERQGWHLPDDALVQICDLNTGAPLPPGQTGDVVVTLFRRDYILVRFAVGDLSALMEPGTPTIISTPRLVGWLGRSGDSVKVRGLFVHPRHVEEAIRTLQGVAAYQAVVVREHHRDDMICRIVPTADADATSLRQSAEQALYDALKIHCRVEIVLSLPEGAKPFVDERRWE

Crispr_ID: NC_009767_13

• CRISPR_ID: NC_009767_13
• CRISPR_location: 749509-749613
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_13

Consensus_repeat	Method
AGTAGCGATGCCGTCACTCAGGAGTAAGCGTT	CRISPRCasFinder

spacers of NC_009767_13

>13.1|749541|41|NC_009767|CRISPRCasFinder
GCTTCTGAACAAACTCGGATGCTTCGCTTATCAGCCACAAA

CRISPR arrays and Neighbor proteins around NC_009767_13

CRISPR arrays

The CRISPR arrays of NC_009767_13

>merge|NC_009767|13|749509-749613|CRISPRCasFinder
AGTAGCGATGCCGTCACTCAGGAGTAAGCGTTGCTTCTGAACAAACTCGGATGCTTCGCTTATCAGCCACAAAAGTAGCGATGCCGTCACTCAGGAGCAAGCGTT

>NC_009767|13|12|749509-749613|CRISPRCasFinder
AGTAGCGATGCCGTCACTCAGGAGTAAGCGTT	GCTTCTGAACAAACTCGGATGCTTCGCTTATCAGCCACAAA
AGTAGCGATGCCGTCACTCAGGAGCAAGCGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_157042523.1|752885_753494_+|hypothetical-protein	unknown	unknown	gnl|CDD|131303
NC_009767.1|WP_012119119.1|743734_744925_-|CoA-transferase	unknown	unknown	gnl|CDD|367110
NC_009767.1|WP_012119117.1|742404_743223_-|TlyA-family-RNA-methyltransferase	unknown	unknown	gnl|CDD|224110
NC_009767.1|WP_012119115.1|735510_736560_-|D-TA-family-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|143494
NC_009767.1|WP_012119128.1|760028_760400_+|DsrE-family-protein	unknown	unknown	gnl|CDD|376874
NC_009767.1|WP_012119112.1|731980_733348_+|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl|CDD|234856
NC_009767.1|WP_012119124.1|753333_753630_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042524.1|753635_754754_-|SPFH-domain-containing-protein	unknown	unknown	gnl|CDD|366488
NC_009767.1|WP_012119120.1|745046_746570_+|AMP-binding-protein	unknown	unknown	gnl|CDD|341264
NC_009767.1|WP_041331508.1|756985_759502_+|DUF2309-domain-containing-protein	unknown	unknown	gnl|CDD|378378
NC_009767.1|WP_012119116.1|737239_742033_+|hypothetical-protein	unknown	unknown	gnl|CDD|379155
NC_009767.1|WP_157042521.1|733325_734648_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl|CDD|225174
NC_009767.1|WP_157042522.1|751899_752478_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119118.1|743222_743711_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119126.1|755360_756941_+|NADH-dehydrogenase	unknown	unknown	gnl|CDD|236171
NC_009767.1|WP_012119114.1|734828_735470_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012119130.1|762151_763159_+|sodium-dependent-bicarbonate-transport-family-permease	unknown	unknown	gnl|CDD|377582
NC_009767.1|WP_012119129.1|760633_762010_+|transcriptional-regulator	unknown	unknown	gnl|CDD|366125
NC_009767.1|WP_012119122.1|749870_751715_+|APC-family-permease	unknown	unknown	gnl|CDD|223605
NC_009767.1|WP_012119111.1|730692_731811_+|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_157042523.1|752885_753494_+|hypothetical-protein	gnl|CDD|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	8.27677e-09
NC_009767.1|WP_012119119.1|743734_744925_-|CoA-transferase	gnl|CDD|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	0
NC_009767.1|WP_012119115.1|735510_736560_-|D-TA-family-PLP-dependent-enzyme	gnl|CDD|143494	cd06820, PLPDE_III_LS_D-TA_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Low Specificity D-Threonine Aldolase-like. This subfamily is composed of uncharacterized bacterial proteins with similarity to low specificity D-threonine aldolase (D-TA), which is a fold type III PLP-dependent enzyme that catalyzes the interconversion between D-threonine/D-allo-threonine and glycine plus acetaldehyde. Both PLP and divalent cations (eg. Mn2+) are required for catalytic activity. Low specificity D-TAs show similarity to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. AR exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on its similarity to AR, it is possible that low specificity D-TAs also form dimers in solution. Experimental data show that the monomeric form of low specificity D-TAs exhibit full catalytic activity.	6.39981e-177
NC_009767.1|WP_012119117.1|742404_743223_-|TlyA-family-RNA-methyltransferase	gnl|CDD|224110	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].	8.74946e-116
NC_009767.1|WP_012119128.1|760028_760400_+|DsrE-family-protein	gnl|CDD|376874	pfam02635, DrsE, DsrE/DsrF-like family. DsrE is a small soluble protein involved in intracellular sulfur reduction. This family also includes DsrF.	3.67452e-11
NC_009767.1|WP_012119112.1|731980_733348_+|phosphoribosylamine--glycine-ligase	gnl|CDD|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	3.54469e-90
NC_009767.1|WP_157042524.1|753635_754754_-|SPFH-domain-containing-protein	gnl|CDD|366488	pfam01145, Band_7, SPFH domain / Band 7 family. This family has been called SPFH, Band 7 or PHB domain. Recent phylogenetic analysis has shown this domain to be a slipin or Stomatin-like integral membrane domain conserved from protozoa to mammals.	6.477e-27
NC_009767.1|WP_012119120.1|745046_746570_+|AMP-binding-protein	gnl|CDD|341264	cd05941, MCS, Malonyl-CoA synthetase (MCS). MCS catalyzes the formation of malonyl-CoA in a two-step reaction consisting of the adenylation of malonate with ATP, followed by malonyl transfer from malonyl-AMP to CoA. Malonic acid and its derivatives are the building blocks of polyketides and malonyl-CoA serves as the substrate of polyketide synthases. Malonyl-CoA synthetase has broad substrate tolerance and can activate a variety of malonyl acid derivatives. MCS may play an important role in biosynthesis of polyketides, the important secondary metabolites with therapeutic and agrochemical utility.	0
NC_009767.1|WP_041331508.1|756985_759502_+|DUF2309-domain-containing-protein	gnl|CDD|378378	pfam10070, DUF2309, Uncharacterized protein conserved in bacteria (DUF2309). Members of this family of hypothetical bacterial proteins have no known function.	0
NC_009767.1|WP_012119116.1|737239_742033_+|hypothetical-protein	gnl|CDD|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	8.79993e-23
NC_009767.1|WP_157042521.1|733325_734648_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl|CDD|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	1.86427e-107
NC_009767.1|WP_012119126.1|755360_756941_+|NADH-dehydrogenase	gnl|CDD|236171	PRK08168, PRK08168, NADH-quinone oxidoreductase subunit L.	7.49453e-83
NC_009767.1|WP_012119114.1|734828_735470_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	6.1926e-27
NC_009767.1|WP_012119130.1|762151_763159_+|sodium-dependent-bicarbonate-transport-family-permease	gnl|CDD|377582	pfam05982, Sbt_1, Na+-dependent bicarbonate transporter superfamily. Family of bacterial proteins that are likely to be part of the Na(+)-dependent bicarbonate transporter (sbt) family. Members carry 10TMS in a 5+5 duplicated structure. The loop between helices 5 and 6 in Synechocystis PCC6803 is likely to be the location for regulatory mechanisms governing the activation of the transporter.	8.01233e-120
NC_009767.1|WP_012119129.1|760633_762010_+|transcriptional-regulator	gnl|CDD|366125	pfam00486, Trans_reg_C, Transcriptional regulatory protein, C terminal.	8.84627e-13
NC_009767.1|WP_012119122.1|749870_751715_+|APC-family-permease	gnl|CDD|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	1.0487e-29
NC_009767.1|WP_012119111.1|730692_731811_+|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	2.498e-39

Protein sequences

>NC_009767.1|WP_012119120.1|745046_746570_+|AMP-binding-protein
MKTPLTTIDALRRAVEHAPQRPFLLFEGLSFSYKDIAAIAACWAARLRAVGVERGDRVALFLENSPAFVTAYLGTHMIGAIVVLVNTLYRQTELRHILNDSAAKVVIVGDQAHADLLRQANAPGVVIFASDVVLEGADDAPDWTRAPEPGDIALIGYTSGTTGRSKGAMLTHANLMANSAAVTVAWHWTEHDRLLLTLPLFHIHGLGVGLNGTLYTASTVDLRRGFDAADVLDTLARGETTMFFGVPTMYTRLIAEARRRQAAGASARVDGMRLFVSGSAPLSPQTFAEFEELFGHRILERYGMTETVMNLTNPYDGERRPGTVGMPFPGQEARIVDVRTRQPLPDGEIGEIQVRGPHVFAGYWRNPQATAEAFDADGWFNTGDLGWRSADGYFTITGRARELIISGGYNIYPREVEEVLLAHPAVSEAAVVGLPDAEFGEQVVAVVVPATSATDSLEQELIDWCRARLASYKKPRRIVFVASLPRNALGKVQKHVMQQQLTPSGAT
>NC_009767.1|WP_012119119.1|743734_744925_-|CoA-transferase
MTLPLEGLRVLDLSRALAGPFCSMMLGDLGADIIKVEQPGIGDHTRAWGPPFEGGESTYFLSVNRNKRSLALDFRNERGAAVLRRLIASSDVLLENFVPGTLDRRGFGYEACRAIRPDLVYCSISGFGQTGPDRERAAYDQIAQGLGGLMSLIGEPGGPPMRVGIAITDIMAGMFAAYAILAALYHRARTGEGQWVDTSLLEGQLAMLTYQAGNYFATGRAPDRPGNQHPSIVPYGVYRAADGYFTLGVGTDDLWERFCDALELTALRNDPRFRTNVSRLAHRAELNALLEPVFASLRVADVERHLNAAGVPCGAVRDLAQVFTDPQVQALGSVVTIDHPTAGSIRVVAPPYHFSATPPAIRRSPPLLGQHTDEILAEIGYEPHEIATLRSAGVVA
>NC_009767.1|WP_012119118.1|743222_743711_-|hypothetical-protein
MTERQGLFTVQTSLHLSPENRARLEHLVRERHSNPPDVVSHILADYPLTQLPRDTNGTEGEPIHIRIYLTPEQRAAFEAHLAEHKTTLSALVSRVVADYLATLPPPPPTPSPSKPKVDLAKRRADLARLKARRDEAGKDAPAWLHAYIAQMEVELRRLEREV
>NC_009767.1|WP_012119117.1|742404_743223_-|TlyA-family-RNA-methyltransferase
MAKKVRLDQLLVQRGLAETRARAQALILAGEVRVNGVTRHKGGELVPDDAEIEVIGALPYVSRGGYKLAHALDTFALSPANLVALDIGASTGGFTDVLLQRGAARVYAVDVGYGLIDWRLRQDPRVVVLERTNIRYLEVLPSPEEEALAAPVLADCAVIDVSFISLKLVLPAVQRLLQPNAWMIALIKPQFEAGPAQVGKGGVVRDPAVHAAVVRDVLTFAATIGLSPHGLTRSPITGPAGNVEFLAWLGGPGPVLNVGWAIEEAVRKTSAN
>NC_009767.1|WP_012119116.1|737239_742033_+|hypothetical-protein
MRTRLWVVGSFIGALLLIALAAPSVSEATIPNRQLWTHAPGTCGPALGGAVFGRAGDNCGGSGTTFDSVNVESPVILRDIATAAAPCPGIAEGGVCYRMWYTGFDAGGVRRIGYAVSPDGATWTRVPGSAGGGAVLGPGPAGNFDNAGVSFPYVIRNGAVFEMWYNGFNGSVFTIGFATSTDGATWTRVAGPLTQGAVLRPTSAATFDQAIVAAPAVIRDEASPQLPCENGRTSGVCYRMWYQGTDAANVFRIGYALSPDGVNWMRAAGGNPVLGVGAAGEWDAGSVGAPVVLKDGALFRMWYNSQASNQSIGHVVSTDGVTWVRPAPNQAVYRGADDPGTLSPDNVWTPFVIKEGAAFRMWYTVSSRPNAVRVGQATMTPGMLLPAPALSRDLGEYTLLLTTQMIPPGGSVLLMLPASVPFADVTVGTMSGFGAGATFTAERAAVTDAFAQGTARGALVIRLPDGAPAGVKTITFTLANPPSTPAIMTVQTFDVREVIEYATIDLSQATNVGPTATPTPVPPSPTSAPPTATATEGPTATATSTPTPTDTPQPPTATSTLLPTNTPQPPTATPAPTADPSNRQPWLHIPGTCPVSVEGAVFTIAGQNCGGGGTSFDTSEIFPPMVLRDTATPALPCENGRTGGVCYRMWYVGVDGSGTRRIGHALSPDGMTWTRFIGSGVGGSVFEPSGVPGDFDSTGVSTMYVVRDGNTFRMWYSGFGNTGAIEGIGYATSPDGITWTRVPGTAGTGAPNRNAVLVERGGVNDFDQDYIVAPSVLIDEATPALPCENGRTSGRCYRMWYEGVNNVSAYVFAIGYAVSPDGINWTRIPGGSGGAVLARINNFTDFDSNSVGVPTVIKDGAFFRMWYEAKSYATPAFSTGYVVSTDGVNWVRPIPNNPVFTGADDPGTFSPDGVWAARALKLGSSYRKYYTVGLRPNARRFGLAQMTPGAPLGSVALSVSGNLYTLSFTTASFIPAGGSVLISLPPDVDFAQVTPGAISGFGAGATLVADPAAVTDAASGGVARGALLIRLPNGAPAGPKTVQFTLGAPPPSTAPLLVQTFDLREVLEYGEVLMDGTPPLATLTATPAPPTNTPTPVPPTATPTAGPSATPTAVTPTATTTPSGSGALRFDGVNDEVRGGQIAGLGGAQTIELWVRPATAGQNSVIIAHSDDNTGWSLELNGGRVTWWVASTGGWRAAQHPTALVANTWYHVAVTYDGATARVFVNGAPGSAATIGAITQGPFLRIGGLTGYGFFNGDLDDVRISNVARYSGAFTPPSTAHPADANTRALYRFDEGSGQTTSDASGNGYHLTLGASGGADSADPLWVASTAPIAPPPPTATPTPVPPTNTPTATSLPPTATPTGTAGPNPTPFPPTNTPTATATPIPPSNNALRFDGVNDEVRGGQIAGLGGAQTIELWVRPATAGQNSVIIAHSDDNTGWSLELNGGRVTWWVASTGGWRAAQHPTALVANTWYHVAVTYDGATARVFVNGAPGSAATIGAITQGPFLRIGGLTGYGFFNGDLDDVRISNVARYSGAFTPPSTAHPADANTRALYRFDEGSGQTTSDASGNGYHLTLGASGGADSADPLWVASTAP
>NC_009767.1|WP_012119115.1|735510_736560_-|D-TA-family-PLP-dependent-enzyme
MRIDDLDTPAVVIDLDRLEANIARFQAHLDRHGIANRPHIKTHKIPQIAQMQIAAGAVGITCQKLGEAEVMADAGITDIFLPYNILGAAKLERLVALARRVQVSVTADSPDVVTGLGAAMSGAGLELPVLVECDTGMGRCGVQTPAEAAELAFQIARTAGLRFGGLMTYPSSPAIGPFMREAVRLLRERGLPVERVSGGGTAGMWHAHEHPEVTEYRAGMYVYGDRYTLRAGALRLEECAMSVLTTVVSRPTPDRGVIDGGSKTFSSDLLGLEGYGLILEYPEARIVNLSEEHGVVDFSQCAQKPAIGERVRVLPNHCCVVSNLFDEVIGARRGEVETIWRVAARGTVR
>NC_009767.1|WP_012119114.1|734828_735470_+|Uma2-family-endonuclease
MNTLLRPPATLTLTLPLVAAEPIIVPRPGRPWTVADLQQFAGREERYELVRGDLLMMSSASPKQGRYAMRLGSALQQYVEAHDLGEVYTAEPGFQLQPEPDAVVRAPDVAFVQKERIPPPEDESGFWSLAPDLVVEIISPFETAVQVQAKVQDYLTAGSRLIWLVYPETHTVVEYRAAGAMRLYASADTLDGADVVPGFQYPLAQLFRETRRM
>NC_009767.1|WP_157042521.1|733325_734648_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MVSVTLADLSEQTLSSTWPDTLELTLDGIAQGGEAVGRWQNRVVFAAGGIPGERVVVRLRERHESYARGDVIDVLLASPDRVAPRLPGASHMPWQHIAFDAQQRLRRQILADQLAKFAGVDPAVVEATAFASKPWEYRNNTRLHCDGRRIGYYESNTRSIAELDHDPLLHPVLNEALAALRSALADELDDAPPLEVTLRVSEAYGYCIAALRGRGDRRSLAARWRARCPVLAGVVFTVPPPHMLPPLGADTLVEELADLTFLLRPTTFFQVNVAAAATLLNLIRAGLGDEARGRLLDLYCGAGAFTLPLARNAIEIVGVEEYAGAVADAERSAAVNHISNVRFITGSAEAVLANLDGPFDAVVLDPPRRGCHPRVLHALIERAPRRIVYVSCHPATLARDLKTLIAGGYAVVRATPVDLFPQTPHIESVVALMRAGSAQV
>NC_009767.1|WP_012119112.1|731980_733348_+|phosphoribosylamine--glycine-ligase
MKILLLGDDGRAHALAWKLINSPRSPEVICAPGNGGTAPFAPSVTLDVADVAGLSRWTFEEQIDLVIPATSAPLHAGLVDEVLSLHIGVWGASRRAAALERSRCLAKEFMIRHGIPTAPGRPFIDLAMAERYLATLTLPVMIKTDHPSGGEEIFDDRYAALEGLRRLFAARSLDGGEGVVIEAVLRGPRVALSALTDGRTVVPLLATRLYDRVEEGDRGAQARGVGAHTGNSAFAQRLTRYLHEKFILPFVAGLEKEGLPCWGLIGVDCIITTEGPRATALRFSFREGEAQVVLPRLEDDLIPWLEASITRRLHELPPPTWSATASVGLGLMARGYPNFFPTGGQIRGLEEIDPGVMLFHSATTNPAATAPYASRLASNRSRSADALSSMIGGLLGMGGAPQSWGGLRTTGGLVATVVAQGVSLPGARGRALVNADRVQFEGRTYRSDIGERDFG
>NC_009767.1|WP_012119111.1|730692_731811_+|STAS-domain-containing-protein
MRSWINTLMTTRATDPDVQRRALIVMQLIIMMLVANVLFAILAIVSPDGGSVLIPVASSALFIGAYALAQRGYASVAAWIVVGAFLSGALFAVANLDSERSVNVGYFLTALIVIASLSLTPPQLWLVTGGVTGGFLLTLITAHPDLWNLPNARHNVLNSSVLLVVVGLVSYIGARIAQRTIRDAQQARQMAEQAQHELARANADLEERIAERTSELSRTLAAQQALTDELRRSLAAQQELSQLILDLSLPVIPVRDGTVVVPLSGTIDSARAAKLTESVLKTIEQRNVDTVILDITGVPIVDTQVAQALVRTASAARLMGAETILVGIRPEVAQTLIGLGIHLGLRTAATLQEGLDLSVRYVNGALRSRHAV
>NC_009767.1|WP_012119122.1|749870_751715_+|APC-family-permease
MMTELKRLVVGRPLANDQLVHERLPKRLALAVFSSDALSSTAYATEAILIVLSAAGAAALGLATPIALGIAVLLMTVAFSYSQTIKAYPQGGGTYIVARENLGTIPSLTAASALLIDYILTVAVSMSAGVAAITSAWPVLDPYRVELAVGLIGLVSLANLRGMKESGAMFAIPTYTFIASMFLLIGAGLVNVVTGNVTPAPPPQTPHLPAEAGALSLFLILRAFAAGCTALTGIEAIADGVPAFRKPESHNAAITLAIMAVLLVTMFLGITVLANAYHIIPDGSHEPETANSQLARAIFGAGSPFYFLLQIATMAILVLASNTAFADFPRLAYFLARDRYFPRQFTQRGDRLVFSNGIVALGLIASILVVAFHAREQALLPLYAVGVFISFTISQVGMVQHWRRAQTPGWRRSALINGFGATMTGVVMVVLAVTKFREGAWAVLLLIPMVVMALLSIHNHYVAVAEQLSLEGAPRPAPVRRHTALVLVSGVHRGVIPALQYALSIAPDNVTAVYVDLDAENTEKIRRKWEEWGCGIPLVILPSPYRSLMQPLLQYIDEVEARYDDDVLTIILPEFVPSKWWQYMLHNQTGLQLKAALFFSRGKVVTSVPYHLEH
>NC_009767.1|WP_157042522.1|751899_752478_-|hypothetical-protein
MRPPVEFWLTTGLVILTRIGDGLSTHLVTPDLSREMNPLAAGGWPALIAAAAVVLVFSTALNYCYLFRPVDNFPQAGGLSLGAFKRHYFDPRANQTLATRTGSVLAYVFGYIVPRTLSAWSLLLIVNNLLTAFEFEPYISLKKTYPVWIAFYLMLPVLALTFLERLQRRDFSRYQEAHARAERPRNDESATS
>NC_009767.1|WP_157042523.1|752885_753494_+|hypothetical-protein
MAHLPHPIRLRTGGVEHVRQFVAQPESLTHGQALLLDQVRAAVRLSHSSIRTEESQMPRVTEYMLFPEKRHPNGMDVANVEAFLRHLAVAGLHRAAAAPHAYSDRWLTIGRSSWFRPNGGVMGRDGPGALRETGVSSARPDFPSNDGHSVRSHPRQGCRARSSGSRHPAGSATAARRSPCRGSLPGRPAESRRDRRGRCRCR
>NC_009767.1|WP_012119124.1|753333_753630_-|hypothetical-protein
MAYLVWTIIGVFVAVLLGAVLPHRSMSGSVVVLPLVGVFGALLGGIIGSGIVHADHAVTLPGALGAILGTVIFVLLSQTQPDAGNRRIGRGNPGADDF
>NC_009767.1|WP_157042524.1|753635_754754_-|SPFH-domain-containing-protein
MKQSHLQGASRRSAVMSDRKRQNQPSTQQGGRGMNVAGRTIAIVFALLIIVGLGAATARFVQVDEGQRGIIITSGAVEGVQEPGVFFRPFAPLTRVEIVNVRRQTLQISQNVASSDKQLYDIDIQIDFSRKTDPESLRQMYARLGAEDDLLRLQLEGFASDALKSASTQFTLDQALSDRGGFSQRIRANLTSPPGPGQQSPADQLFVVIEAVKVLDIKVSEEYARLLSEKANLEVKIETEERRRQQIEAEQANNLFQAEQEARVALTREKGQTAAALEAANREAQVRAIQGRYWRENPELFELRTRELMVEMLKSGNIWFIDPNTNITLLLNQMATGTTVVPNPSSGQRTSTQPSQPATPEQPAAPTTPTTP
>NC_009767.1|WP_012119126.1|755360_756941_+|NADH-dehydrogenase
MEGMMGGNLALIGYLAPLSLAVVALIAWLSRSVNLTFQLGRIASIGSFLLLLGLGIVVFTSGPMVSPVIGVGEAGIALRLDALSVMMSWLVTLLGTLLIQFSRNYLDGDPHQKLFFIRLYLTVSAVLLMVLSGNLWQLVLAWIGMSLALHELLVFYPERPRALRAARKKFITARIGDVCLIVAAVLLAQTFGTTDLGMIREAAASALAGGTIPAGAAIAAILIVIVAALKSAMFPFHGWLLEVMETPTPVSALLHAGLLNAGIFLVVRFGELVFLSTPALILLIVLGGFTAIFASSSMITQTSVKVSLAYSSAAHMGFMIMLCGFGAHTVAIMHLIAHSCYKAHAFLSSGSIIEYVRDTGAQKLDTAPHPLSLLANMAVSVAVFLAVATAIGIDITKRPGETAMITIFMIAVAYLLVKGNTDKAPISVIGRTMLMATLVTMAFFALEVMAEALLGGAVAVYPPLDMPTMIAVVLAVVLFGIVMAFSAFLPALVNRPAWRALYVHLKNGFYANAMFDRFLDVFRLAR
>NC_009767.1|WP_041331508.1|756985_759502_+|DUF2309-domain-containing-protein
MHMAETRTRPAPMMAASLQMVTADMIAAAAKRAEQRIAPLWPLRNFVAVNPYLGLLDYSFETAAELLARRAGARTTAPRAFYAQAIRDGRITDADLASALAEGSPSPGAPATVEALKAFALSNAPEPTFTTLPTVADVAREITGVNWADIVTDSISAWAGAYFDLGQSYWRSPWKPMSAYAAWRAEATYDRTPHIRGAQGFHQALRELPESAMETIIAAVEMLHIPADGLEAYLHRLLLTIHGWAGYARYLRWEAELYGGADHTLTDLLAIRLVWEVALWRSFASRGMAEAWRTRSHELVGDQLDAALQRAIAGDLLLQRAFEKAYQRQLFACLGTPKPVKHATRKRAQAAFCIDVRSEIFRRALETVTDEIETIGFAGFFGFPIEYVPLAETRGGAQCPVLLTPQFVIAESVGGASETEVTAVIEKRALNQRVAKVWRMFKFGPVSCFGFVGPVGLAYVRKLLLDTLGITRPVPHPATFGLDARTRERVKPSLEPRAIGGRTTGMSPEQRVNVAEGALKAMSLTSNFARLVLLAGHGSTTVNNPHATGLDCGACGGHTGEANVRVAVQILNDPAARTGLKARGIVIPDDTVFVAGLHDTTTDDVTIFDKNDIPASHADDLRRLEADLAAAGRLARAERAALLKIDPKGNIDGAVRQRSRDWSQVRPEWGLAGCAAFIAAPRDRTAGAKLDGRSFLHNYDWRQDEGFGVLELIMTAPMIVASWINLQYYGSTVDNRVFGSGNKTLHNVVGTLGVLEGNSGDLRVGLPWQSVHDGERYVHEPMRLHVMIEAPIEAMTAIIARHEQVRQLLDNGWLYLFALDERGKVTHTYAGGLRWEAC
>NC_009767.1|WP_012119128.1|760028_760400_+|DsrE-family-protein
MTTKPQLVIIITHAGHDPGAATLGFLTASAALAAGNRAAVLLRGEGVLCATSEGWAAGLHAAGYPPLREARDAYRTAGGTLYLSQPCLRRYWLNADNGLLPDVRVLSIADIAALCVGTTTVTF
>NC_009767.1|WP_012119129.1|760633_762010_+|transcriptional-regulator
MSLNAGEPMNPFGNRKPVIAPDLFTGRRDLIAAVCERLTAAPPQCCAIIGDARSGKTSLLYYLRSAAPGRPICGDTTARFVFSYVNAGPYADLGASQSHGALYFWRDLARATSQALDRHDDLPALPDQGIAETAIVDAVYALKCVVEDMLRQRSDRTFVFLIDNVEGIARLPRHTASFLRSLTQDPDIGARVAYVVTASVPLSRLYPADELREPSSFWSLFASELFIGGLDDADITALFGRAPELNDADRAWIRRLGGANLMLLLIAAAHVYHWRMHPNGSSPNDIERAAIEEARPLCRTWWRKLLETYAIATDAREALLEQNRAPTSDEGVLFDALRQRGLAQRDRNGWRISSTIFAQALSDQPGMPSIETSLPLPSAPPAFTHLEGEVYAFLREHAGRVCTRDEVKRAIWPVSPPSDSALQKIIERIRDKIEPDPKHPRKLIAVRGQGYMLRRDVE
>NC_009767.1|WP_012119130.1|762151_763159_+|sodium-dependent-bicarbonate-transport-family-permease
MDTIEIIRSNLLSPLVLAFILGVVATLIRSEVEIPESVIKAISVYLLFSIGLNGGVELAGTPISAFLLPALVTIALAIAVPTWCYLILRGLGRFDIPNAAGIAAHYGSVSSVTFVAGISFVERLPEGQNSFEAFIPALAALMEWGIIVALFIGRWRLGATQSQNSELGRVIRDTLTGRSVVLLLGGLLIGVIIGEQGFARIKPLYGDLFRGVLVFFLIEMGMLAGRQLRDFVKVGLFMAVFGTIMPLIHGMIGTSLGLLAGLSPNGAFILGVITASASYIDAPAAVRATFPQANPSIYLTSSLGITLPVNLIIGLPLYYEYARWLGAALGRMEYQ

Crispr_ID: NC_009767_14

• CRISPR_ID: NC_009767_14
• CRISPR_location: 779040-779141
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_14

Consensus_repeat	Method
GCGTCGCAGGACACACCGATGTTGTGTTAT	CRISPRCasFinder

spacers of NC_009767_14

>14.1|779070|42|NC_009767|CRISPRCasFinder
TGCGACGTGTATTTCTTGGCAATTGAGACAACCAGTCGCGCA

CRISPR arrays and Neighbor proteins around NC_009767_14

CRISPR arrays

The CRISPR arrays of NC_009767_14

>merge|NC_009767|14|779040-779141|CRISPRCasFinder
GCGTCGCAGGACACACCGATGTTGTGTTATTGCGACGTGTATTTCTTGGCAATTGAGACAACCAGTCGCGCAGCGTCGCAGGACACACCGATGTTGTGTTAT

>NC_009767|14|13|779040-779141|CRISPRCasFinder
GCGTCGCAGGACACACCGATGTTGTGTTAT	TGCGACGTGTATTTCTTGGCAATTGAGACAACCAGTCGCGCA
GCGTCGCAGGACACACCGATGTTGTGTTAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119143.1|777058_778198_+|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173847
NC_009767.1|WP_012119142.1|776577_776823_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119151.1|787496_787835_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119141.1|774412_775699_-|citrate-synthase	unknown	unknown	gnl|CDD|99869
NC_009767.1|WP_012119152.1|787964_789515_+|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|236901
NC_009767.1|WP_012119135.1|767418_767814_-|HEPN-domain-containing-protein	unknown	unknown	gnl|CDD|368314
NC_009767.1|WP_012119145.1|779286_779931_-|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl|CDD|273990
NC_009767.1|WP_157042525.1|778206_778824_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119148.1|782031_782991_-|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl|CDD|223646
NC_009767.1|WP_012119137.1|768277_769840_+|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009767.1|WP_012119136.1|767800_768166_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_012119150.1|785536_787186_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009767.1|WP_012119146.1|779957_780776_-|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224042
NC_009767.1|WP_012119149.1|783214_785224_-|PstS-family-phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270372
NC_009767.1|WP_012119153.1|789483_790287_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009767.1|WP_012119138.1|769849_771181_+|cell-cycle-protein	unknown	unknown	gnl|CDD|274232
NC_009767.1|WP_012119140.1|773253_774213_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009767.1|WP_012119154.1|790348_791290_+|hydroxymethylglutaryl-CoA-lyase	unknown	unknown	gnl|CDD|163676
NC_009767.1|WP_012119147.1|780775_782035_-|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl|CDD|223654
NC_009767.1|WP_012119139.1|771520_773257_+|penicillin-binding-protein-2	unknown	unknown	gnl|CDD|223839

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119143.1|777058_778198_+|acyl-CoA-dehydrogenase	gnl|CDD|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
NC_009767.1|WP_012119153.1|789483_790287_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.23812e-51
NC_009767.1|WP_012119141.1|774412_775699_-|citrate-synthase	gnl|CDD|99869	cd06116, CaCS_like, Chloroflexus aurantiacus (Ca) citrate synthase (CS)_like. CS catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or Krebs cycle). This group is similar to gram-negative Escherichia coli (Ec) CS (type II, gltA) and Arabidopsis thaliana (Ath) peroxisomal (Per) CS. However EcCS and AthPerCS are not found in this group. The overall CS reaction is thought to proceed through three partial reactions and involves both closed and open conformational forms of the enzyme: a) the carbanion or equivalent is generated from AcCoA by base abstraction of a proton, b) the nucleophilic attack of this carbanion on OAA to generate citryl-CoA, and c) the hydrolysis of citryl-CoA to produce citrate and CoA. There are two types of CSs: type I CS and type II CSs. Type I CSs are found in eukarya, gram-positive bacteria, archaea, and in some gram-negative bacteria and are homodimers with both subunits participating in the active site. Type II CSs are unique to gram-negative bacteria and are homohexamers of identical subunits (approximated as a trimer of dimers). Some type II CSs are strongly and specifically inhibited by NADH through an allosteric mechanism. C. aurantiacus is a gram-negative thermophilic green gliding bacterium, its CS belonging to this group may be a type I CS; it is not inhibited by NADH or 2-oxoglutarate and is inhibited by ATP. Both gram-positive and gram-negative bacteria are found in this group.	0
NC_009767.1|WP_012119152.1|787964_789515_+|PAS-domain-containing-protein	gnl|CDD|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	1.2461e-81
NC_009767.1|WP_012119135.1|767418_767814_-|HEPN-domain-containing-protein	gnl|CDD|368314	pfam05168, HEPN, HEPN domain.	3.86312e-29
NC_009767.1|WP_012119145.1|779286_779931_-|phosphate-signaling-complex-protein-PhoU	gnl|CDD|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	1.12e-40
NC_009767.1|WP_012119149.1|783214_785224_-|PstS-family-phosphate-ABC-transporter-substrate-binding-protein	gnl|CDD|270372	cd13654, PBP2_phosphate_like_2, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.3257e-103
NC_009767.1|WP_012119148.1|782031_782991_-|phosphate-ABC-transporter-permease-subunit-PstC	gnl|CDD|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	6.58113e-87
NC_009767.1|WP_012119137.1|768277_769840_+|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.31862e-122
NC_009767.1|WP_012119136.1|767800_768166_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	1.5976e-16
NC_009767.1|WP_012119150.1|785536_787186_+|HAMP-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	3.28725e-38
NC_009767.1|WP_012119146.1|779957_780776_-|phosphate-ABC-transporter-ATP-binding-protein	gnl|CDD|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	3.50018e-179
NC_009767.1|WP_012119138.1|769849_771181_+|cell-cycle-protein	gnl|CDD|274232	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW. This family consists of FtsW, an integral membrane protein with ten transmembrane segments. In general, it is one of two paralogs involved in peptidoglycan biosynthesis, the other being RodA, and is essential for cell division. All members of the seed alignment for this model are encoded in operons for the biosynthesis of UDP-N-acetylmuramoyl-pentapeptide, a precursor of murein (peptidoglycan). The FtsW designation is not used in endospore-forming bacterial (e.g. Bacillus subtilis), where the member of this family is designated SpoVE and three or more RodA/FtsW/SpoVE family paralogs are present. SpoVE acts in spore cortex formation and is dispensible for growth. Biological rolls for FtsW in cell division include recruitment of penicillin-binding protein 3 to the division site. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	3.14433e-80
NC_009767.1|WP_012119139.1|771520_773257_+|penicillin-binding-protein-2	gnl|CDD|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	4.16288e-91
NC_009767.1|WP_012119154.1|790348_791290_+|hydroxymethylglutaryl-CoA-lyase	gnl|CDD|163676	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	2.73565e-152
NC_009767.1|WP_012119147.1|780775_782035_-|phosphate-ABC-transporter-permease-PstA	gnl|CDD|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	1.58985e-86
NC_009767.1|WP_012119140.1|773253_774213_+|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	5.89308e-15

Protein sequences

>NC_009767.1|WP_157042525.1|778206_778824_+|hypothetical-protein
MRSFARLTRIGMVLCVVMACVLSLQLMGLAAVDQPRGSQWAEARARWNAQAPGSYHIAVRIEALGNVCVQRLEVRGAWVRRVIENTCDAFWVDPLTVDELFALASDIESIPASRCSPSPHDCPCHRVFTLRRIEYDAAYGFPVTILARSEVQFHPAARDFWEYLWQNQQLPTCQPARRRFTVQVLSLTPLAPEDSTQTSAIEKVQ
>NC_009767.1|WP_012119143.1|777058_778198_+|acyl-CoA-dehydrogenase
MDFALSEQHEMLRQTVRAFAEQEARPTAAARDEAMEFPVDLVKKMGQLGLMGVAVSEQYGGAGLDYVSYAIVIEELSRVDASLGVIASVNNSLVCYGIETFGTEDQKRELLTPLAEGRMLGAFSLSEPGAGSDAAAQKTTAARDGDYYVINGIKNWVTNGDYADTIILMAMTDPGKGHRGITAFLVDPREPGCSIVKVEHKLGIRSAHSCQMAYDNYRLPAWRRLGEEGQGFKIAMTILNAGRIGIAAQAVGIAQGAYEAALEYAKIREQFGKPIIENQAIGFTLADMATRIKAARLLTYEAAWRKDQHLDFVSAASMAKLYASETAMWTATKAVQVFGSNGYSKEYPVERYFRDAKITEIYEGTSEIQRLVIAREIAR
>NC_009767.1|WP_012119142.1|776577_776823_-|hypothetical-protein
MQHKNYDEQTVNEVAERVPEARRVLRSYHISASNAMPLDIAAAEASVTPDELLAVVEYKARRRARQAPAIREYALEEELVA
>NC_009767.1|WP_012119141.1|774412_775699_-|citrate-synthase
MTKNTLTITDNRTGKTYEIPIEHDAIRATDLRQIKVNPDDFGLMSYDPAFMNTAACVSRITYIDGDKGILEYRGYPIEQLAEQSSYLEVAYLLLYGELPSKERLAWWEYRISRHLFLHNSLVELIQAFRYDAHPMGILISSVAAMSTLYPEAKNIHDPAVREKQIWRIIGQIPTIAAFAYRHRIGRPFNLPDSSLSYTANLLYMMDYMNQRDYEVNPVLAKALDVLFILHADHEQNCSTSVMRSVGSSHADPYSALSAAAAALYGPLHGGANEAVLRMLQQIGHPKNVPAFIERVKKGETRLMGFGHRVYKNYDPRAKIIRQIAHEVFAATAANPLLDIAMELERVALEDEYFISRKLYPNVDFYSGLIYQALRFPIEYFPFLFAIPRASGWLAQWLEMLDDPEQKITRPRQIYLGHARRDYVPVDQR
>NC_009767.1|WP_012119140.1|773253_774213_+|tetratricopeptide-repeat-protein
MKQRTGRCVACIALVIVLAACSEPLVEPRAPRTPTAVIDRYNAIVATAEAGDDLLMRARAYYDRGNIWFEQQNYIEAIADYDRALALDPSMSRAFHNRGLAYALLKEYDAALRDYAQAIHLDPAYRRAYENRVRLLEELTASTPDETLLQQLADDYGSLARLIPEAEAPYRYRQGLILVRLNDRTAAREAFDAAIRARPQHVDALYERALLHYAVGDLNAALADLDTALRLSPRAANAYYARGLIRHTQGDPRSAIADFGQALLLRPDYPEALIARAATYAEQGNITAARADLKRLDELQLDPALQPAREALRIRINAP
>NC_009767.1|WP_012119139.1|771520_773257_+|penicillin-binding-protein-2
MTDRLRARIDWFAGALGVLILGSGLFIASVMQWRLHLLAGLWLLSLPARRLIGRYRATADRSLRGLMVMAVLGFAAIGLQLARNQATQSEATLRAVASLAQPVASEPSQPIFPETDPAERTSLGSGRAFPVVINAGMRGRIVDRNGVVLAETVDGRRTYPNPALGHLIGFQSRLYGTTGLEARFDAQLSGVATLSPTAILEARLLGSPVEQVPADLTLTLDSRLQAAAQQALGERAGAVVLLDVPTGAILAMVTYPRFDPNQLVLPEPVTQADVDRVQAAWAELNARADAPLLNRATQGRYPPGSVIKTLTAAAALDSGVLADPSAPVTCPNLLPTEAGAPPVRNAVDNLFRRTGDPSDLVRVYAFSCNTAFAQVGLSLGADRFLEYARRFGLQTADTRSGPADLRDIPAEIGTIANDASFLQRPAALADTAFGQGQALVTPLDMAQMAASIANDGRLMRPYLVAEARAGERVIYQAQPEMVRQVVSPETSRRMLDMMRISVEIGYAQPIALPGVSIGAKTGTAETPRGVPHSWIVAVAPVEQPQYAIAVIVEYGGEGSRSALPVARQVLAAALGVTP
>NC_009767.1|WP_012119138.1|769849_771181_+|cell-cycle-protein
MATIARLRVRLGGRTLEFELLITAFLFIAICLAALIAGAGGRVRWVDLTIIGAFAGLFLTISLALALRDWGEDQMVLPIAALLAGVGMLMARRLEPDLVQRYGEVYSGIALKQVIWIFGGALLLALVSFVPWRLQWLKHYRYTWLLLGLVLVGATAVFGVERNGARLWLSLGFFQLQPVEMLKVLLVIYLATYLDDHRELIGRGVYWLGPLKLPPLPYLAPIVMMWGATIGLIIVQKDLGAALLFFVIFLAMLYVVSGRARYAAVGLFAFALGAAALYPLFGHVRVRLNAWLDPWSDPFGIGFQMVRALHALAAGGWVGTGIGAGDPTTVPESHTDFVFVAIGEELGLAGTLALTVCYALFALRGYLIAIHARDGFQQLLATGLTTAIAAQAFIIMAGTTHLIPLTGITLPFISYGGSSTLINFAMVGLLLRVSASRKPPQTL
>NC_009767.1|WP_012119137.1|768277_769840_+|serine/threonine-protein-kinase
MSATTPLIGATIGNYEIQALIGSGGMATVYRGFDHNLGRAVAIKILSEEARAHPGFVDRFRQEARIIANLRHPNIVQVYDFGVHNGMPYMVQELLPGPTLEQRITDAVCNGRPLSLDEIVAITRQLAAALDAAHAAGVIHRDVKPANAMWNALGSLVLTDFGIARNMLASGNQTQVGMVVGTPGYLSPEQAQGLPVTPASDIYSLGVVVFEMLAGRLPFNGDTPMSIAIQHIQTPPPPLRTLRSDIPPAIEAVVLRALAKDPAARFERAEQFAAALERACLTSTPGVAATAIHQQATAIWQSGGAAVKPASPSIPAAASAPPVVETRASPKQERRFSLLPLLGGAFALLLLVGAFLAMRGSGSTAGQIGDAAPTAPLATVAPTAASAATPAPEVAIPPPDTPVAPTTAPPPTPIPPATPVSPPAPPVATGSALADLRSLLTSVASEGRSRRDAQKWLRTLEEFEREIGRGEARKAQDKLRELQRELTQAEKAGKLSAEASGQALQYIQTIANAYGIDLGR
>NC_009767.1|WP_012119136.1|767800_768166_-|nucleotidyltransferase-domain-containing-protein
MSATLSLPANVAPRGLPPVAETLPAAIERLVREVNPEKIILFGSYAYGNPTPDSDVDLLVVVQTNEPYRQRYLRVARALQPRLFPLDLIVKTPEEIEEALSAFSPFLHEIYTKGICLYERK
>NC_009767.1|WP_012119135.1|767418_767814_-|HEPN-domain-containing-protein
MKESNPLDWVAKAEGDLDMARRALRGKMRHTDAAVFHAQQCAEKYLKALLIAGTITFPKTHDLTILRHLCISNGIPVNVDEPALDFLSGYAVNARYPGAEPSLEEAREAIAIARSVRAFARRWLGMKGGRP
>NC_009767.1|WP_012119145.1|779286_779931_-|phosphate-signaling-complex-protein-PhoU
MVHDYDYLRHTLDAMGRRVKDALHESLQALRRSDAIGAQRVVHDDPDINALQQAVEDRIARFITQRQPLLRDLRRVLAMLTVAGELERIGDYAKQVAERVRRSRDEQHPLLLTAELLELGAMTEDMLSASIDAFLAEDVVAARSVAALDDQIDARRRAIIAALRQAALNDASLFDAAIAAIDITRALERVADRATNIAERTVYLATATHETLNE
>NC_009767.1|WP_012119146.1|779957_780776_-|phosphate-ABC-transporter-ATP-binding-protein
MAVAERSSINTAQSNGKYAVELHDTHIYYGSFRAVKNVTLQIERQRITAFIGPSGCGKSTVLRAINRMNDLIPGSRLEGRILFHGKNIYDPDVDPVEVRRRVGMVFQKPNPFPKSIYDNIMFGPRINGWRGTKAQADELVERALRGAAIWDEVKDKLQQPGTALSGGQQQRLCIARALAVQPEVILMDEPCSALDPISTLKIEELMLELRRNYTIIIVTHNMQQASRVSDYTAFFLMDADRAGQLVEYGSTEQIFTSPNDKRTEDYISGRFG
>NC_009767.1|WP_012119147.1|780775_782035_-|phosphate-ABC-transporter-permease-PstA
MSTTVNPGNRPTGYLPEGADINRNIAARRLRGKVWQAFFLSSLIIGLLALATLLYTIVDDSFGYIAVQTKIDPEKLSDRPLEELSKEELIEILRANISPGLFRRFDRDEPFSERSKESVLQLIEERVIGREVVAAYKLTESLLERDRIEATVRERFPRAELEFHSWINREFLTRPMSSSPILAGVGNAILGSLWVIAITMLLAIPIGILGGVYLEEYASDTWYYRLIETNINNLAGVPSIIYGILGLAVFVRALEALTSGATFGVTDSNGRTILSAGLTMALLVLPLMIINAREAIRAVPQSIRQASYGLGATKWQTVWHHVLPNALPGILTGTILSMSRAMGETAPLIVVGASTFVVFFPDSVFDKFTVIPIQIYNWTQQPGAQFRSIAAAAIIVLLVTLLLLNATAILLRNRFKRSY
>NC_009767.1|WP_012119148.1|782031_782991_-|phosphate-ABC-transporter-permease-subunit-PstC
MEQEVRVGIERAAAVGGSAINLRGKRRFGEHIIETIVFICGALSIFTTTAIVIVLFQEAWMFFGSPEVNLTEFFGTTTWQPETGRFGIWPLMTSTLLTSFIALLVAVPLGLGAAIYLSEYASPTARGYLKPILEVLAGVPTVVYGYFALTFVTPVILQGLLGKERVEIYNMLSAGLTMGIMILPLVASMSEDALSAVPRSLREGSYGLGATRLETSVRVVVPAALSGILAAVIVAMSRAVGETMIVALAAGAGPRFTFNPLQAAETMTGHIARISGGDISYASIQYTSIFAIALVLFFMTLLLNLLSGWVVRRFREVYE
>NC_009767.1|WP_012119149.1|783214_785224_-|PstS-family-phosphate-ABC-transporter-substrate-binding-protein
MQVFRTRMFAMALMLALIAPLIAACGGGGATQPTVAPTTAPAEATPAPVAPTAAPTAPPATGATPAPAQPTPAPAAEIDYDGLPDVDPGAVTGNIVTAGSSTVFPLTQRMAERFKDEGYAGNITIDSIGTGAGFERFCKAGETDISNASRPIRPAEVENCRAIGREPVEFRVGTDALAVVVNPANTFVDTLTKAQLADIFSGKAKTWKDVNPDWPANPIKLFSPGSDSGTFDFFVEVVMDPAFEKKGKEAILNAPGIQLSENDNVLVQGVEGDPNAIGYFGYAYFIAEKDRLKAVKIEGVEPNDQTAESGTYPLARPLFIYSDAKIMKEKPQVADFINFYLTYVNDEVLDVGYFPASQQAINVAKANWLAAMGMELALPEVDPGAVTGNIVTAGSSTVFPLTQRMAERFKDEGYAGNITIDSIGTGAGFERFCKAGETDISNASRPIRPAEVENCRAIGREPVEFRVGTDALAVVVNPANTFVDTLTKAQLADIFSGKAKTWKDVNPDWPANPIKLFSPGSDSGTFDFFVEVVMDPAFEKKGKEAILNAPGIQLSENDNVLVQGVEGDPNAIGYFGYAYFIAEKDRLKAVKIEGVEPNDQTAESGTYPLARPLFIYSDAKIMKEKPQVADFINFYLTYVNDEVLDVGYFPASQQAITVAKLNWLGAMKP
>NC_009767.1|WP_012119150.1|785536_787186_+|HAMP-domain-containing-protein
MNTASLSTPAGRSLSTTLALALISLSVVALLVSNALQMASNWQVHQRGLAREQESRAHGAAVEVRAFFDARWNMLATSIKMSSLATAPAEQRTEALERLLVLDPLFEQLIILDDQRFVVASASQNPHKTVNFLDPALIDEIMRRTALRDRLISSLRIDAASGEPGIVMALPLVDSFENYHGALIATVNARLLWTTVQRQTPDPDSLAYVVDRQGNLLACSDTARVMRGDNASGVAIVQRFIRERSASIQTMHYTGLSGAEVVGSYEALDDPPWAVVIETPRAVAYRSVLNDLVVSGIILLGAVVVSGGIGLYLARWLTAPLIDLTRVANRIASGERDVPVDARGPREIQILARAFTAMTAQLEANLETLEQRVAQRTADLRAALAEVEARAREQARLLEEIAHQREVIRELSVPVLPVTEDALVMPLIGAIDTERLADIQDRALHALQRSRACYLLVDITGVPVVDSQVAQGLIAIASMCRLLGAEMVLIGIRPEVAQTIVGLGLNLSSLRTAADLQTVLRDFAAQRRDRVARNGEAIERRNGRGSLPA
>NC_009767.1|WP_012119151.1|787496_787835_+|hypothetical-protein
MPEKKSRQSSPPRGAIGRLRGSVGVAEQALRGRTERVKRLTPPPPPLSATLERVLTIGGLPLLLARLFWHNLREVRFWWPVVLPLLIWTAWRTYHRERAKSRHHDTPAQIRA
>NC_009767.1|WP_012119152.1|787964_789515_+|PAS-domain-containing-protein
MSASVQSDIQDGLKTSICEIARRLCVATDAKACYLAMRERPTAPPRFIGAVGVQGDPPDWNEIDGDHLVRRIGHKRELVVAERSMHALLLALPASGRDIGVAVLLFDSEPPPVSDAFVAAAQLAGLALESVWQLAALHDQAEQLAERTRLREIQVSRNLIRGVIDSVPMGLVLIDPVGYVLAANRALAERFGLEPAMLVGRFYGDVLGEWSEAAAARTFATRQPQRLRRTLQRPGGSESLIEIASIPLFDASGAAHQAVEVWEDITERVALQTQLVRAEKLAAIGHLAASIAHEVGNPLQAIQGFLALFLEQCPPETPNQHFLQLAEEEIDRIVRVLERLRDLYRPRADVFTHVNVNELIESVLLLTGKQLERSRIQVLRELAPDLPAIQGVADQLKQVLLNLVLNAAEAMPNGGTLHVQTYRYHPTEGKGAVAIAITDTGIGISPDQLTRIFDGLHTTKERGMGLGLYTSRAIIERHLGRISAQSIPGEGTTFEIVLPVRHEEIRHETTGENPGR
>NC_009767.1|WP_012119153.1|789483_790287_+|response-regulator-transcription-factor
MRQPAKILVVDDERAVRIMLETALRAHGYRVETAANGADARMRIEHEEFDLLLLDLQLGDIDGIDILREVKERSPATEVILLTAHGSINSAIAALRYGAFDYLLKPAQVAEIRERVERALNNRRINLQRTELLQRISESARALGLIESGSHPISAPSTSSDHLTVGPLMLDLRRHAAYLGEHVLTLTRTEFALLTALAQNPDTALSYTALSEAVYGRAQPEDEARSLLRPHIARLRQKLDATKTPGIALISIRSMGYMLQTENAPVP
>NC_009767.1|WP_012119154.1|790348_791290_+|hydroxymethylglutaryl-CoA-lyase
MIADPRLPRSVSIREVGPRDGLQNEEVILATAQKVQLIDRLADAGLTLIEVGAFVRPANVPQMADTAEVFAALPRRPGVTYSAIVPNVIGARRAIAARADALQVFLSASESHNRSNVNMSIEQSLMQAADIAAVAREAGVHFEAVVSVAFGCPFEGDVPLERVMDLTARLFDLGAGQITFGDTTGMGHPGLVRALLQAFYARFPQARPRLHLHSARGAGLANVLMALQLGVDCFDASVGGIGGCPFAPGAPGNICTEDLAHMLHEMGISTGIHLPTLLDVARMLEGMLGRTVPGQTMKAGICKHLPPDGSPRR

Crispr_ID: NC_009767_15

• CRISPR_ID: NC_009767_15
• CRISPR_location: 814464-814573
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_15

Consensus_repeat	Method
GGCGGTGCGCTGAGCCGGTCGAAGCG	CRISPRCasFinder

spacers of NC_009767_15

>15.1|814490|58|NC_009767|CRISPRCasFinder
CGGTGCGCTGAGCCGGTTGAAGCGTCGTCACGCCCGGCAACGACCAGGAACGCGCGCA

CRISPR arrays and Neighbor proteins around NC_009767_15

CRISPR arrays

The CRISPR arrays of NC_009767_15

>merge|NC_009767|15|814464-814573|CRISPRCasFinder
GGCGGTGCGCTGAGCCGGTCGAAGCGCGGTGCGCTGAGCCGGTTGAAGCGTCGTCACGCCCGGCAACGACCAGGAACGCGCGCAGGCGGTGCGCTGACCCGGTCGAAGCG

>NC_009767|15|14|814464-814573|CRISPRCasFinder
GGCGGTGCGCTGAGCCGGTCGAAGCG	CGGTGCGCTGAGCCGGTTGAAGCGTCGTCACGCCCGGCAACGACCAGGAACGCGCGCA
GGCGGTGCGCTGACCCGGTCGAAGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_157042528.1|817590_818064_+|transposase	unknown	unknown	gnl|CDD|379129
NC_009767.1|WP_049768780.1|809529_810960_-|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|143465
NC_009767.1|WP_049768782.1|818331_818529_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_049768782.1|814743_814941_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119168.1|807242_808280_-|hydroxyacid-dehydrogenase	unknown	unknown	gnl|CDD|240650
NC_009767.1|WP_157042527.1|816737_817325_+|hypothetical-protein	unknown	unknown	gnl|CDD|379565
NC_009767.1|WP_083760263.1|805693_806077_-|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl|CDD|377129
NC_009767.1|WP_012119167.1|806452_807268_-|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl|CDD|319818
NC_009767.1|WP_012119170.1|808533_809511_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119164.1|804143_805694_-|DAK2-domain-containing-protein	unknown	unknown	gnl|CDD|274671
NC_009767.1|WP_012119166.1|806154_806361_+|mitochondrial-large-ribosomal-subunit-protein-bL28m	unknown	unknown	gnl|CDD|376396
NC_009767.1|WP_012119172.1|811646_812636_+|CAP-domain-containing-protein	unknown	unknown	gnl|CDD|349398
NC_009767.1|WP_012119173.1|812732_813941_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|236545
NC_009767.1|WP_041330158.1|816050_816263_+|DUF2281-domain-containing-protein	unknown	unknown	gnl|CDD|378366
NC_009767.1|WP_041330159.1|818776_819718_+|DMT-family-transporter	unknown	unknown	gnl|CDD|307170
NC_009767.1|WP_041330156.1|810993_811242_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119174.1|815091_815781_-|tyrosine-type-recombinase/integrase	unknown	unknown	gnl|CDD|131303
NC_009767.1|WP_012119179.1|820923_821904_-|terpene-synthase	unknown	unknown	gnl|CDD|173835
NC_009767.1|WP_012119178.1|819772_820906_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009767.1|WP_012119175.1|816259_816607_+|transcriptional-modulatorof-MazE/toxin-MazF	unknown	unknown	gnl|CDD|367091

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_157042528.1|817590_818064_+|transposase	gnl|CDD|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	0.000754342
NC_009767.1|WP_049768780.1|809529_810960_-|aldehyde-dehydrogenase-family-protein	gnl|CDD|143465	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.	0
NC_009767.1|WP_012119168.1|807242_808280_-|hydroxyacid-dehydrogenase	gnl|CDD|240650	cd12173, PGDH_4, Phosphoglycerate dehydrogenases, NAD-binding and catalytic domains. Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases. PGDH in E. coli and Mycobacterium tuberculosis form tetramers, with subunits containing a Rossmann-fold NAD binding domain. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence.	8.35252e-117
NC_009767.1|WP_157042527.1|816737_817325_+|hypothetical-protein	gnl|CDD|379565	pfam14338, Mrr_N, Mrr N-terminal domain. This domain is found at the N-terminus of the Mrr restriction endonuclease catalytic domain, pfam04471. Fold recognition analysis predicts that it is a diverged member of the winged helix variant of helix turn helix proteins. It may play a role in DNA sequence recognition.	1.65686e-14
NC_009767.1|WP_083760263.1|805693_806077_-|Asp23/Gls24-family-envelope-stress-response-protein	gnl|CDD|377129	pfam03780, Asp23, Asp23 family, cell envelope-related function. The alkaline shock protein Asp23 was identified as an alkaline shock protein that was expressed in a sigmaB-dependent manner in Staphylococcus aureus. Following an alkaline shock Asp23 accumulates in the soluble protein fraction of the S. aureus cell. Asp23 is one of the most abundant proteins in the cytosolic protein fraction of stationary S. aureus cells, with a copy-number of >25000 per cell. A second Asp23-family protein, AmaP, which is encoded within the asp23-operon, is required to localize Asp23 to the cell membrane. The overall function for the family is thus a cell envelope-related one in Gram-positive bacteria.	1.22479e-17
NC_009767.1|WP_012119164.1|804143_805694_-|DAK2-domain-containing-protein	gnl|CDD|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	2.01381e-146
NC_009767.1|WP_012119166.1|806154_806361_+|mitochondrial-large-ribosomal-subunit-protein-bL28m	gnl|CDD|376396	pfam00830, Ribosomal_L28, Ribosomal L28 family. The ribosomal 28 family includes L28 proteins from bacteria and chloroplasts. The L24 protein from yeast also contains a region of similarity to prokaryotic L28 proteins. L24 from yeast is also found in the large ribosomal subunit.	1.13134e-12
NC_009767.1|WP_012119172.1|811646_812636_+|CAP-domain-containing-protein	gnl|CDD|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	5.47645e-17
NC_009767.1|WP_012119173.1|812732_813941_-|Uma2-family-endonuclease	gnl|CDD|236545	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional.	1.50182e-18
NC_009767.1|WP_041330158.1|816050_816263_+|DUF2281-domain-containing-protein	gnl|CDD|378366	pfam10047, DUF2281, Protein of unknown function (DUF2281). Members of this family of hypothetical bacterial proteins have no known function.	0.00906705
NC_009767.1|WP_041330159.1|818776_819718_+|DMT-family-transporter	gnl|CDD|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	2.08283e-05
NC_009767.1|WP_012119167.1|806452_807268_-|Cof-type-HAD-IIB-family-hydrolase	gnl|CDD|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.31786e-72
NC_009767.1|WP_012119174.1|815091_815781_-|tyrosine-type-recombinase/integrase	gnl|CDD|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	5.38262e-18
NC_009767.1|WP_012119179.1|820923_821904_-|terpene-synthase	gnl|CDD|173835	cd00687, Terpene_cyclase_nonplant_C1, Non-plant Terpene Cyclases, Class 1. This CD includes terpenoid cyclases such as pentalenene synthase and aristolochene synthase which, using an all-trans pathway, catalyze the ionization of farnesyl diphosphate, followed by the formation of a macrocyclic intermediate by bond formation between C1 with either C10 (aristolochene synthase) or C11 (pentalenene synthase), resulting in production of tricyclic hydrocarbon pentalenene or bicyclic hydrocarbon aristolochene. As with other enzymes with the 'terpenoid synthase fold', they have two conserved metal binding motifs, proposed to coordinate Mg2+ ion-bridged binding of the diphosphate moiety of FPP to the enzymes. Metal-triggered substrate ionization initiates catalysis, and the alpha-barrel active site serves as a template to channel and stabilize the conformations of reactive carbocation intermediates through a complex cyclization cascade. These enzymes function in the monomeric form and are found in fungi, bacteria and Dictyostelium.	1.4194e-64
NC_009767.1|WP_012119178.1|819772_820906_-|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.4818e-34
NC_009767.1|WP_012119175.1|816259_816607_+|transcriptional-modulatorof-MazE/toxin-MazF	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	3.76519e-06

Protein sequences

>NC_009767.1|WP_012119173.1|812732_813941_-|Uma2-family-endonuclease
MTTTTARPTPAADAPADDPFRYGWRFVPRPTPDDPRHLEQVPLTLEDVLHPEVGDFIVHSDRHETDRMYLTEVLRARLESSGAAIVLSDVRIAWDIPDLRPHGPDVMVIPGIRERQNWSTFEVAVEGARPALIIEITSPETRENDLERKVAHYARAGVAQYVIVDDMGRGRTRRLRLLDYRLEHGHYVAHPADANGRVYLAMANLWLGIEGDHVVCYDEHGIAFGNYATVVQQAAEDRARARAEAEAREAEARARAEAETRARAEAEAREAEARARAEAETRARAEAEAREAEARARAEAEARARAEAETRARAEAEARKAEARARAEAEMREAEARARAEAEARARAEAEAREAEARARAEAETRARAEAEAREAEARARAEAEARLHALEEELRRLRGGG
>NC_009767.1|WP_012119172.1|811646_812636_+|CAP-domain-containing-protein
MIRCLHAITIILLTGFILLLSSFARAPLARGADSAVFAQPGNQPGRGTSALGDPPQPDTPPVDAATNAGAGTNATPTEAVQSAVTVFLPLIARPLPPLPDDWLGRVNGYRARAGVPLVSADVTLNNNCFEHARYMAENNDLTHNQNPSLPYASPAGQICAQKGNAWMGWGGAWRQRDAIDGWMESVGHRLWLLYPTTPTFGFGFYSNGQRSAAGLDVLSRARFDDDAAYAGWPVRYPAPGQQGVPATRYPITLQWPYFDQKPVVTGTSLRALPGTVLGHTTTTDLPVNHKGVAIIPNQAFPPNATIEVTVTGSYKGQPFSFTWQFQTGN
>NC_009767.1|WP_041330156.1|810993_811242_-|hypothetical-protein
MTQTVINPPRVEATSNVERSDLTGAPLYVIVDAFKRRGQSLLRVPGYERTGAAYRPIAPTERRSASARAGRRTTPFTRHGVM
>NC_009767.1|WP_049768780.1|809529_810960_-|aldehyde-dehydrogenase-family-protein
MTHSDTPEYRFYLAGEWRTGAPYTVACPYDGAPVAVVHRATLDDLEQAIQAAVAAFRTTRSTPLHRRAAALRAIAASIETRAEELARTIALEAGKPIKQARIEVARSIVTFSTAADEATRSNDEALRLDAAPGGEGRHAIVRRFPVGPVAAITPFNFPLNLVAHKVAPAIAAGCSVVLKPASQTPVTALKLAEMIASSGWIPEALSVLPLASRDAAPLIEDERFGLLTFTGSPAVGWEMKRRAGRKRVTLELGGNAGVIIHSDADLAFAAERCVVGGFSYAGQSCISVQRIFVHAPVYDAFMNLFVPQVRALKVGHPLDETSDLSSLINPAEAERVAAWLDEARGAGAEFLTGGVVQSGVVAPTIVARAAPELRVNCQEIFAPVVTVQPYETFEAALEAVNNSDFGLQAGVFTRDVGRIFQAFDTLEVGGVIINDVPTWRLDPMPYGGVKQSGFGREGLRYAIEEMTERKLLVMRG
>NC_009767.1|WP_012119170.1|808533_809511_+|hypothetical-protein
MSRLITRIVALVFAVVTLAAITPLPSDERFVEPNSALQPVFRVERAMPPPVKAPPERIRFPVATRRTVALPEIGIAEQTPPSAEVVAPLPFIAGDGPPMRGTRIAQTGRLDVYVGLRTFTPEQIAAIAPRLEELLRGNEERFGFQLQQRVSIAFYRPSLAPSKDTRGIAYTEEGRAEVYYRPNEDIERALVVASHELAHHLQAQRYGDDAQKRADIILLEGLATWITGPPWLAKYGVARWKERARQIGDSGVPLRLLNAQRYGDNIAYELWASFVDFLIERDGMEKMHALYVSGRGREPGSADYQGIYGASLNELANEWRVWVRS
>NC_009767.1|WP_012119168.1|807242_808280_-|hydroxyacid-dehydrogenase
MHNSDLSPIHQRPRIWTDIRLLPEAAALLEAHAEVAAGGDPATLPGSAAAIISAMINADGAWMDRAGPTLMAIARPGIGVDNIDLAAATERGILVINTPDGPTESTAEHAVALVLALAKQVVAADHRFRTAGWSAARLRGVEVRGKTLGVVGLGRIGRRVAQICRQGLGMRVAAYDPLAPAEAFAALDVVHVETLDNLLPQSEFLTLHCALTPSTRGLIGARELALLPKGAFLINVSRGAVIDQAALIDALTTGHLAGAGLDVFDPEPLPNDHPLLQFPHVILTPHIASFTDDGVRVMHHGAVAQIVRLLRGEHPPHIVNPEALPGRRAKMNHGTQPDALPTDRP
>NC_009767.1|WP_012119167.1|806452_807268_-|Cof-type-HAD-IIB-family-hydrolase
MPFQLIALDLDGTVIDHDLTIHPDVRETIAAVQARGIDVTLATGRMFGAALPFARELDIRAPIICYQGALVRHPLTGDTLYHAAMPAELAAAAVRELLDADMCVVAYIDDIHHITAYRPELERYLAFHPEGTEMVVTPDLDRLVERVPPTKLLFVAEPPVVERELMRLTARFGGALAVVRSHAIFGELTAPHVSKGNALSALAQSLGAPREAVLAIGDQENDISMITWAGLGLAMGNATPAVRARAHAVLPPVSEAGVAHALRRYVLNCAS
>NC_009767.1|WP_012119166.1|806154_806361_+|mitochondrial-large-ribosomal-subunit-protein-bL28m
MAKCMVCNKSVSFGRNIRHKASGGWARRAPKTNRTFKPNVQKTTIMVDGEKVQIKVCTQCLRTMYRAR
>NC_009767.1|WP_083760263.1|805693_806077_-|Asp23/Gls24-family-envelope-stress-response-protein
MHHATGETMNTVNNHTAIGKPAGRVLIAPRAIASIAAAAALQTDGVAGLTDPQGPPFVLPPGEARRGVDVHVHQNDLAVDVHLIVQTGRSIADVARAAQSAVRAALSFTLDLPEPTVNIRVQGVGGR
>NC_009767.1|WP_012119164.1|804143_805694_-|DAK2-domain-containing-protein
MTGAWNGEHLLEALRAASRDLERHAASLNALNVFPVPDGDTGTNMALTLSSALRDITPHPSCGTVAEQVGYWATMRGRGNSGIILSQILRGVAAALAGHHLMSGREMAVALTHGSTRAYEAVLRPVEGTMLTVIRCAGEAAQRAIAAGEASLSAVLEAAVREARAAVARTPQLLATLRDAGVVDAGGQGLLVLLEALLRYARGEASDSHAPTVTPTATVDDHAESAGYCTSFVIHHATAPPETLRRVFAALGESLVIAGDRALVKIHLHTPRPGDALNQALAYGILDQIEVVNMDLQRMAHHSGAALSDTQPDTPANPAPGIIALAPGAGYAAILRDLRADLVWETNTPPTIDEWRAAFERLPQQEIIVLPNDPQAAETAQATAPLFARRIAIVPATSPPQGIAALLALNFQADVDQNIRAMTAAAERVRVITFDGQRRNEMETPAEAVQDAYNVCHTLQQMGANAAEVVTLYYGQAVDQTHAERLAQEIRVAFPMLHVEVHAGGQPGSGVAIALE
>NC_009767.1|WP_049768782.1|814743_814941_+|hypothetical-protein
MPLPRRRVVARGVAWMARVRGPARDDAQLPETVAGGHGLALARLMLKRCAERVEARFIPGMVERT
>NC_009767.1|WP_012119174.1|815091_815781_-|tyrosine-type-recombinase/integrase
MLSKAIIFHGKNHCQGRAILSAKKRADRRRSDIRLRGSSIRTEQSYLHRYKHGHARRARHSTDAQPHLRHDAGGRILAHLDGAPYLAACVLYGSGLRLLAALRRRSLHTRLAQVRRRSEAHPALPVSMLPALAHTYPAAVTSWERHDVFPARDLSVDPRTLAVSGSQRAITGAVRAAGITTRATAHTLRAAFAHQRNDAGYRLDDLQQRMDHADIRTTRHSLKGQPPAA
>NC_009767.1|WP_041330158.1|816050_816263_+|DUF2281-domain-containing-protein
MTLDEKIYQYVRKLPYSFQEELFDFVQYLLTKAEQQEKQDWAFLSLSAAMREMEDEPELYSMSDIKVAFA
>NC_009767.1|WP_012119175.1|816259_816607_+|transcriptional-modulatorof-MazE/toxin-MazF
MKKAGQIVLFQFPQTDLEKGKLRPALLLGKLPGEYDDWLICMVSSQTRQYIAGFDEIVKEDDEDFEQSGLKVASVIRVGRLAVVAGEILLGAIGEISQERLYRVKRNLSNWLSEK
>NC_009767.1|WP_157042527.1|816737_817325_+|hypothetical-protein
MDQNEVAIAFDIVLEEIENAIAALNREGSQALQVGKYDVARELMEKGSQVTAFRTKVVDLQKEWINIFAALMPSKVQKRSIKVDARLKRGLRTPEDEFRAPILQCLVDLGGSAPMTEVLDRVERVMKDRLNAYDRLPLPSDSTLIRWRNTAQWARNVMVREGLLASDSPRGVWEITPAGRRWLAAAIEAEMKRRA
>NC_009767.1|WP_157042528.1|817590_818064_+|transposase
MVCPSEIYAVGVPHNAHTRSTRGERRGAGLRRSLPDLHDRRRPAARPRAARDGIVRTGALWRMRPNDPPPWPTVSPPTQRWRQAGGVAPLVHARRAQLRAIEGRAPAPRAATVDARAMPATPDSGARASDDGHHRRTVSTGHVAVDPLVQSLAVAVR
>NC_009767.1|WP_049768782.1|818331_818529_+|hypothetical-protein
MPLPRRRVVARGVAWMARVRGPARDDAQLPETVAGGHGLALARLMLKRCAERVEARFIPGMVERT
>NC_009767.1|WP_041330159.1|818776_819718_+|DMT-family-transporter
MQTSSTSTAPTQRAAFSWSGMGIALLAHTGWGAYPVLARYLQTVSDMPSMALLGLGNLIALAVYLPFVWRHVDKRILRSTLIWGFALVVVLRAITNLLAARFTLAIYIQPITLMTPLFVALLSAGLFREPLPPLTWSAITLSLLGAALMMSDDVGAPGVTLALTPSDWIGITLATASALCLAIYMILVPRTVQHAVPGEAVLLMQLVTLTIVSTGISLLIGEEWVRFAALTPMDWSVFAAFVFGVLLGSNLGQIVSLRRLGAPLVSSVMAWRLIATLALAALLLGERLDSWRQVLGALIVLTTITGYLWRQGR
>NC_009767.1|WP_012119178.1|819772_820906_-|STAS-domain-containing-protein
MTTDIMPESTMQAQMTRLRQFLSAYMPVAFLFGVVFLALALIFRDLATGISGVAIIVNGGILLYALRSVRQGKVQSAIVATSVGLLAGGLVILLAQPFLFATLTLSPLLVVILGLQYLTIQPLKRLIAASGLCSVIAVSVGHLLPQGFIASTLPEWFRDVLQIGAASAAVVFVMMLIWHFSVLLNEMLSSLRVANRELETQQTKLVRTNEQLQQQLASERELLNLVSALETPVVSLAEGILLAPIVGHIDSRRADILRSHLLEVVHANRTRLMILDITGVTTIDTSVAQALMMTIQALRLLGCKVVVSGISATVAMTLTHLGVDLHNVETVRSPEEALERLERGEPMSHLRQPLMNGAEMRAFLPGLMNGNGAHHKA
>NC_009767.1|WP_012119179.1|820923_821904_-|terpene-synthase
MDQDYRARLVYPFSGAISPHADIVDQATLAWAAMFGLLTDSLRHKSRRLQYGLLAARAYPRADREMLQIAADWIAWLFFMDDQCDETGIGRDLQRMIALHERFLAILDGATPEAHDCALTYALADLRRRLALRAPDNWLRRFSEHVRLYFTANRWETVNRQRGATPNVATYCAARLFSGAVYACFDLIELAEQIELPFYARHHSIVQQLEQAANNIICWCNDVLSYPKEMQHGDRHNLVLVIQGEHQCSLPEAIDRALDLHAREVATFVRKRTCVPYFDAAVNTALEKYVTGLQFWICANRDWSLTATRYAPTHKSQEMVMAVAQQ

Crispr_ID: NC_009767_16

• CRISPR_ID: NC_009767_16
• CRISPR_location: 818052-818161
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_16

Consensus_repeat	Method
GGCGGTGCGCTGAGCCGGTCGAAGCG	CRISPRCasFinder

spacers of NC_009767_16

>16.1|818078|58|NC_009767|CRISPRCasFinder
CGGTGCGCTGAGCCGGTTGAAGCGTCGTCACGCCCGGCAACGACCAGGAACGCGCGCA

CRISPR arrays and Neighbor proteins around NC_009767_16

CRISPR arrays

The CRISPR arrays of NC_009767_16

>merge|NC_009767|16|818052-818161|CRISPRCasFinder
GGCGGTGCGCTGAGCCGGTCGAAGCGCGGTGCGCTGAGCCGGTTGAAGCGTCGTCACGCCCGGCAACGACCAGGAACGCGCGCAGGCGGTGCGCTGACCCGGTCGAAGCG

>NC_009767|16|15|818052-818161|CRISPRCasFinder
GGCGGTGCGCTGAGCCGGTCGAAGCG	CGGTGCGCTGAGCCGGTTGAAGCGTCGTCACGCCCGGCAACGACCAGGAACGCGCGCA
GGCGGTGCGCTGACCCGGTCGAAGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_049768780.1|809529_810960_-|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|143465
NC_009767.1|WP_012119181.1|822992_824105_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NC_009767.1|WP_049768782.1|818331_818529_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_049768782.1|814743_814941_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042526.1|814002_814476_+|transposase	unknown	unknown	gnl|CDD|379129
NC_009767.1|WP_012119184.1|827453_828326_+|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl|CDD|376615
NC_009767.1|WP_157042527.1|816737_817325_+|hypothetical-protein	unknown	unknown	gnl|CDD|379565
NC_009767.1|WP_012119180.1|821931_822768_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|215135
NC_009767.1|WP_012119182.1|824388_825735_-|murein-biosynthesis-integral-membrane-protein-MurJ	unknown	unknown	gnl|CDD|240528
NC_009767.1|WP_157042768.1|825731_826727_-|uroporphyrinogen-decarboxylase	unknown	unknown	gnl|CDD|239548
NC_009767.1|WP_012119172.1|811646_812636_+|CAP-domain-containing-protein	unknown	unknown	gnl|CDD|349398
NC_009767.1|WP_012119173.1|812732_813941_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|236545
NC_009767.1|WP_012119185.1|828864_829371_-|DUF3368-domain-containing-protein	unknown	unknown	gnl|CDD|225269
NC_009767.1|WP_041330158.1|816050_816263_+|DUF2281-domain-containing-protein	unknown	unknown	gnl|CDD|378366
NC_009767.1|WP_041330159.1|818776_819718_+|DMT-family-transporter	unknown	unknown	gnl|CDD|307170
NC_009767.1|WP_041330156.1|810993_811242_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119174.1|815091_815781_-|tyrosine-type-recombinase/integrase	unknown	unknown	gnl|CDD|131303
NC_009767.1|WP_012119179.1|820923_821904_-|terpene-synthase	unknown	unknown	gnl|CDD|173835
NC_009767.1|WP_012119178.1|819772_820906_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009767.1|WP_012119175.1|816259_816607_+|transcriptional-modulatorof-MazE/toxin-MazF	unknown	unknown	gnl|CDD|367091

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_049768780.1|809529_810960_-|aldehyde-dehydrogenase-family-protein	gnl|CDD|143465	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.	0
NC_009767.1|WP_012119181.1|822992_824105_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.42841e-62
NC_009767.1|WP_157042526.1|814002_814476_+|transposase	gnl|CDD|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	0.000840406
NC_009767.1|WP_157042527.1|816737_817325_+|hypothetical-protein	gnl|CDD|379565	pfam14338, Mrr_N, Mrr N-terminal domain. This domain is found at the N-terminus of the Mrr restriction endonuclease catalytic domain, pfam04471. Fold recognition analysis predicts that it is a diverged member of the winged helix variant of helix turn helix proteins. It may play a role in DNA sequence recognition.	1.65686e-14
NC_009767.1|WP_012119180.1|821931_822768_-|methyltransferase-domain-containing-protein	gnl|CDD|215135	PLN02244, PLN02244, tocopherol O-methyltransferase.	1.35255e-34
NC_009767.1|WP_012119182.1|824388_825735_-|murein-biosynthesis-integral-membrane-protein-MurJ	gnl|CDD|240528	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.07283e-101
NC_009767.1|WP_157042768.1|825731_826727_-|uroporphyrinogen-decarboxylase	gnl|CDD|239548	cd03465, URO-D_like, The URO-D _like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases. Uroporphyrinogen decarboxylase (URO-D) decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, an important branching point of the tetrapyrrole biosynthetic pathway. The methyltransferases represented here are important for ability of methanogenic organisms to use other compounds than carbon dioxide for reduction to methane.	1.05711e-37
NC_009767.1|WP_012119172.1|811646_812636_+|CAP-domain-containing-protein	gnl|CDD|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	5.47645e-17
NC_009767.1|WP_012119173.1|812732_813941_-|Uma2-family-endonuclease	gnl|CDD|236545	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional.	1.50182e-18
NC_009767.1|WP_012119185.1|828864_829371_-|DUF3368-domain-containing-protein	gnl|CDD|225269	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	1.6067e-22
NC_009767.1|WP_041330158.1|816050_816263_+|DUF2281-domain-containing-protein	gnl|CDD|378366	pfam10047, DUF2281, Protein of unknown function (DUF2281). Members of this family of hypothetical bacterial proteins have no known function.	0.00906705
NC_009767.1|WP_041330159.1|818776_819718_+|DMT-family-transporter	gnl|CDD|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	2.08283e-05
NC_009767.1|WP_012119178.1|819772_820906_-|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.4818e-34
NC_009767.1|WP_012119174.1|815091_815781_-|tyrosine-type-recombinase/integrase	gnl|CDD|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	5.38262e-18
NC_009767.1|WP_012119179.1|820923_821904_-|terpene-synthase	gnl|CDD|173835	cd00687, Terpene_cyclase_nonplant_C1, Non-plant Terpene Cyclases, Class 1. This CD includes terpenoid cyclases such as pentalenene synthase and aristolochene synthase which, using an all-trans pathway, catalyze the ionization of farnesyl diphosphate, followed by the formation of a macrocyclic intermediate by bond formation between C1 with either C10 (aristolochene synthase) or C11 (pentalenene synthase), resulting in production of tricyclic hydrocarbon pentalenene or bicyclic hydrocarbon aristolochene. As with other enzymes with the 'terpenoid synthase fold', they have two conserved metal binding motifs, proposed to coordinate Mg2+ ion-bridged binding of the diphosphate moiety of FPP to the enzymes. Metal-triggered substrate ionization initiates catalysis, and the alpha-barrel active site serves as a template to channel and stabilize the conformations of reactive carbocation intermediates through a complex cyclization cascade. These enzymes function in the monomeric form and are found in fungi, bacteria and Dictyostelium.	1.4194e-64
NC_009767.1|WP_012119184.1|827453_828326_+|prolipoprotein-diacylglyceryl-transferase	gnl|CDD|376615	pfam01790, LGT, Prolipoprotein diacylglyceryl transferase.	6.76238e-81
NC_009767.1|WP_012119175.1|816259_816607_+|transcriptional-modulatorof-MazE/toxin-MazF	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	3.76519e-06

Protein sequences

>NC_009767.1|WP_157042527.1|816737_817325_+|hypothetical-protein
MDQNEVAIAFDIVLEEIENAIAALNREGSQALQVGKYDVARELMEKGSQVTAFRTKVVDLQKEWINIFAALMPSKVQKRSIKVDARLKRGLRTPEDEFRAPILQCLVDLGGSAPMTEVLDRVERVMKDRLNAYDRLPLPSDSTLIRWRNTAQWARNVMVREGLLASDSPRGVWEITPAGRRWLAAAIEAEMKRRA
>NC_009767.1|WP_012119175.1|816259_816607_+|transcriptional-modulatorof-MazE/toxin-MazF
MKKAGQIVLFQFPQTDLEKGKLRPALLLGKLPGEYDDWLICMVSSQTRQYIAGFDEIVKEDDEDFEQSGLKVASVIRVGRLAVVAGEILLGAIGEISQERLYRVKRNLSNWLSEK
>NC_009767.1|WP_041330158.1|816050_816263_+|DUF2281-domain-containing-protein
MTLDEKIYQYVRKLPYSFQEELFDFVQYLLTKAEQQEKQDWAFLSLSAAMREMEDEPELYSMSDIKVAFA
>NC_009767.1|WP_012119174.1|815091_815781_-|tyrosine-type-recombinase/integrase
MLSKAIIFHGKNHCQGRAILSAKKRADRRRSDIRLRGSSIRTEQSYLHRYKHGHARRARHSTDAQPHLRHDAGGRILAHLDGAPYLAACVLYGSGLRLLAALRRRSLHTRLAQVRRRSEAHPALPVSMLPALAHTYPAAVTSWERHDVFPARDLSVDPRTLAVSGSQRAITGAVRAAGITTRATAHTLRAAFAHQRNDAGYRLDDLQQRMDHADIRTTRHSLKGQPPAA
>NC_009767.1|WP_049768782.1|814743_814941_+|hypothetical-protein
MPLPRRRVVARGVAWMARVRGPARDDAQLPETVAGGHGLALARLMLKRCAERVEARFIPGMVERT
>NC_009767.1|WP_157042526.1|814002_814476_+|transposase
MACPSEIHAVGVPHDAHTRSTRGERRGAGLRRSLPDLHDRRRPAARPRAARDGIVRTGALWRMRPNDPPPWPTVSPPTQRWRQAGGVAPLVHARRAQLRAIEGRAPAPRAATVDARAMPATPDSGARASDDGHHRRTVSTGHVAVDPLVQSLAVAVR
>NC_009767.1|WP_012119173.1|812732_813941_-|Uma2-family-endonuclease
MTTTTARPTPAADAPADDPFRYGWRFVPRPTPDDPRHLEQVPLTLEDVLHPEVGDFIVHSDRHETDRMYLTEVLRARLESSGAAIVLSDVRIAWDIPDLRPHGPDVMVIPGIRERQNWSTFEVAVEGARPALIIEITSPETRENDLERKVAHYARAGVAQYVIVDDMGRGRTRRLRLLDYRLEHGHYVAHPADANGRVYLAMANLWLGIEGDHVVCYDEHGIAFGNYATVVQQAAEDRARARAEAEAREAEARARAEAETRARAEAEAREAEARARAEAETRARAEAEAREAEARARAEAEARARAEAETRARAEAEARKAEARARAEAEMREAEARARAEAEARARAEAEAREAEARARAEAETRARAEAEAREAEARARAEAEARLHALEEELRRLRGGG
>NC_009767.1|WP_012119172.1|811646_812636_+|CAP-domain-containing-protein
MIRCLHAITIILLTGFILLLSSFARAPLARGADSAVFAQPGNQPGRGTSALGDPPQPDTPPVDAATNAGAGTNATPTEAVQSAVTVFLPLIARPLPPLPDDWLGRVNGYRARAGVPLVSADVTLNNNCFEHARYMAENNDLTHNQNPSLPYASPAGQICAQKGNAWMGWGGAWRQRDAIDGWMESVGHRLWLLYPTTPTFGFGFYSNGQRSAAGLDVLSRARFDDDAAYAGWPVRYPAPGQQGVPATRYPITLQWPYFDQKPVVTGTSLRALPGTVLGHTTTTDLPVNHKGVAIIPNQAFPPNATIEVTVTGSYKGQPFSFTWQFQTGN
>NC_009767.1|WP_041330156.1|810993_811242_-|hypothetical-protein
MTQTVINPPRVEATSNVERSDLTGAPLYVIVDAFKRRGQSLLRVPGYERTGAAYRPIAPTERRSASARAGRRTTPFTRHGVM
>NC_009767.1|WP_049768780.1|809529_810960_-|aldehyde-dehydrogenase-family-protein
MTHSDTPEYRFYLAGEWRTGAPYTVACPYDGAPVAVVHRATLDDLEQAIQAAVAAFRTTRSTPLHRRAAALRAIAASIETRAEELARTIALEAGKPIKQARIEVARSIVTFSTAADEATRSNDEALRLDAAPGGEGRHAIVRRFPVGPVAAITPFNFPLNLVAHKVAPAIAAGCSVVLKPASQTPVTALKLAEMIASSGWIPEALSVLPLASRDAAPLIEDERFGLLTFTGSPAVGWEMKRRAGRKRVTLELGGNAGVIIHSDADLAFAAERCVVGGFSYAGQSCISVQRIFVHAPVYDAFMNLFVPQVRALKVGHPLDETSDLSSLINPAEAERVAAWLDEARGAGAEFLTGGVVQSGVVAPTIVARAAPELRVNCQEIFAPVVTVQPYETFEAALEAVNNSDFGLQAGVFTRDVGRIFQAFDTLEVGGVIINDVPTWRLDPMPYGGVKQSGFGREGLRYAIEEMTERKLLVMRG
>NC_009767.1|WP_049768782.1|818331_818529_+|hypothetical-protein
MPLPRRRVVARGVAWMARVRGPARDDAQLPETVAGGHGLALARLMLKRCAERVEARFIPGMVERT
>NC_009767.1|WP_041330159.1|818776_819718_+|DMT-family-transporter
MQTSSTSTAPTQRAAFSWSGMGIALLAHTGWGAYPVLARYLQTVSDMPSMALLGLGNLIALAVYLPFVWRHVDKRILRSTLIWGFALVVVLRAITNLLAARFTLAIYIQPITLMTPLFVALLSAGLFREPLPPLTWSAITLSLLGAALMMSDDVGAPGVTLALTPSDWIGITLATASALCLAIYMILVPRTVQHAVPGEAVLLMQLVTLTIVSTGISLLIGEEWVRFAALTPMDWSVFAAFVFGVLLGSNLGQIVSLRRLGAPLVSSVMAWRLIATLALAALLLGERLDSWRQVLGALIVLTTITGYLWRQGR
>NC_009767.1|WP_012119178.1|819772_820906_-|STAS-domain-containing-protein
MTTDIMPESTMQAQMTRLRQFLSAYMPVAFLFGVVFLALALIFRDLATGISGVAIIVNGGILLYALRSVRQGKVQSAIVATSVGLLAGGLVILLAQPFLFATLTLSPLLVVILGLQYLTIQPLKRLIAASGLCSVIAVSVGHLLPQGFIASTLPEWFRDVLQIGAASAAVVFVMMLIWHFSVLLNEMLSSLRVANRELETQQTKLVRTNEQLQQQLASERELLNLVSALETPVVSLAEGILLAPIVGHIDSRRADILRSHLLEVVHANRTRLMILDITGVTTIDTSVAQALMMTIQALRLLGCKVVVSGISATVAMTLTHLGVDLHNVETVRSPEEALERLERGEPMSHLRQPLMNGAEMRAFLPGLMNGNGAHHKA
>NC_009767.1|WP_012119179.1|820923_821904_-|terpene-synthase
MDQDYRARLVYPFSGAISPHADIVDQATLAWAAMFGLLTDSLRHKSRRLQYGLLAARAYPRADREMLQIAADWIAWLFFMDDQCDETGIGRDLQRMIALHERFLAILDGATPEAHDCALTYALADLRRRLALRAPDNWLRRFSEHVRLYFTANRWETVNRQRGATPNVATYCAARLFSGAVYACFDLIELAEQIELPFYARHHSIVQQLEQAANNIICWCNDVLSYPKEMQHGDRHNLVLVIQGEHQCSLPEAIDRALDLHAREVATFVRKRTCVPYFDAAVNTALEKYVTGLQFWICANRDWSLTATRYAPTHKSQEMVMAVAQQ
>NC_009767.1|WP_012119180.1|821931_822768_-|methyltransferase-domain-containing-protein
MTAHESVHPTPDEVGAYYDLMGPFYATLWGDNIHVGYWTGPDDMSSHVEAQDRLTDLLIEKVNLTTGQTLIDVGCGVGRPAIRLSRHSGASVVGITVSADQVARATMLAEQNGVTDRVRFERADAMALPFDDETFDAAWAFESLLHMPDRQHVLQEIWRVLRPGGKFALTDVTEERPLSDEHRALLYGSFMLRSLETIERYPALVTAAGFVVDEVIDISAHTKRTLQFVSDALIQKRDDIRALYGDDLLATLEQVWPQLAAIQRDHLGYVVLVAQKPR
>NC_009767.1|WP_012119181.1|822992_824105_-|serine-hydrolase
MKNVKLTIDPKRLQRAYDILQRWLDERIVTAIASVLLHRGRLAGEFYGGSAAPAPNAPPINGNSLFHIASIGKPMTAFAVMLLVEAGRLTLDDPVADILTEFRGAGRDVITVRQLLTHTSGLPQDPDRSRLPPNATTSEELRTYLAAGPIVPPGSKVEYSNVGYGLLGLIIEEVGRQSFASFMHERVFAPAGLRDTWLAPPEDLFPRIVHVGGTLDPGSPTERFNSAHARRQTHPAGSVLATARDVARFFQVVLNGGAIDGRQVISPVAARLMITNQTPGLRGGIEGFMTWDDCAWGLGFDLRGNKHPHFSGEFTSPATFGHTGISGVFAWADPALDLVCVMLANRTLFDQWNTSRWSRFSTAVVASLTG
>NC_009767.1|WP_012119182.1|824388_825735_-|murein-biosynthesis-integral-membrane-protein-MurJ
MIRREFSIAEGTLLFTTAYVISAGLGIVRQALFNAGFGAGMEASAYYAAFRLPDTIASLIGGGALSNAMIPALLGARYESGDVAEQRLVNLTATTLTVAVSLVVLVCMIFAPFFVRFVLAPGFDAETAALTIALTRIMLAQLALVVLASVAIAVLNARNQFLLTAISIVTHNVTMIGGILAARFIPGVGIYGPAFGVVGDAILQLIILCPGLRANRFRVRPAWDLRDARLRQLFRLLAPNGLSSGVNYAGGIVDTAFASLAREAGALPALFNAGLLMGVPLRLIGVALAQAAFPRIAAYAARNDRKRLRRTLLAALAGSMTLAVAAALTLALIGRALVRLLFERGRFDAAASDLTTLLLGVYIAGLPMYVATEVLTRGLIALHDTQTPLVTNCAQLAGRGVLIWVWIEPWGVVAIPAAFAITSVLETVALGAALAWRMRRRREARGER
>NC_009767.1|WP_157042768.1|825731_826727_-|uroporphyrinogen-decarboxylase
MTRRERLAAAIRGEPVDRPPVALWRHFPVDDQDPEQLALSVAAFQSQYDWDFVKFTPSSSFCVENWGCRVVYRGHSEGTSDYVARPVSVPADWRRITPLDPRAGALGAHLVAVRRARALIDPDVPLLATVFSPISQAKNLIGGGMDIVHLRRHRSDLLDALEAITETTIRFVEAVLETGADGIFYAMQRCTADVISEAEYREVCRPLDMRILEAAHAASAAHGKPPFILLHLHGMHSYFDIAAEYPAQALNWHDRDTGPDLAEGARRFPGMVVGGLSQRDIVEGSPTAVQSLARQAIAAMGGRRMCLSTGCVMPTTAPWGNIRALRDVVGP
>NC_009767.1|WP_012119184.1|827453_828326_+|prolipoprotein-diacylglyceryl-transferase
MGLYPPDDPFLINVSLFGIPVVVRWYGVIIVSGAMLAGWIAARRAQQRGYDPEHIWNLLLVGMIFGIIGARAYYVLFEWPRFAGASWLEIINPATGGLAIHGALIGALTAATLYTRWHHLPLRTFLDIAMPPFLLAQAIGRWGNFMNQEAYGSPTSLGFGVLIDEEHRIGPYRDMQQFPPDTLFHATFLYESVWNLIGFGILIWLERRLRDRLRPLDMALLYAVWYGLGRFWIEGFRTDSLCLSGIGGACEGSLRVAQVVSLLLVAGGFIGLLINHCYVARHTAQPRGCE
>NC_009767.1|WP_012119185.1|828864_829371_-|DUF3368-domain-containing-protein
MSEPVVSDTGPLITLAKLNLLHLLKQLYGEVLLPQSVHEEAVIEGIRRGFEDAHTLQRFLSQERWEPIEIRHIPDDIASSHLDQGEQESIALALAVDGLLLIDEERGREAARQHGVKVRGTLGVLVHAYRVGLITADQLRFYFGQIEERTDIWISPTLCRRLLHEVLG

Crispr_ID: NC_009767_17

• CRISPR_ID: NC_009767_17
• CRISPR_location: 951630-951738
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_17

Consensus_repeat	Method
GTGACCATGCCGGATGGTCACAGGTCATTGGTATAA	CRISPRCasFinder

spacers of NC_009767_17

>17.1|951666|37|NC_009767|CRISPRCasFinder
GCCGGCTAGCCGGCGCGCAATCTCATCAGGATTGGCA

CRISPR arrays and Neighbor proteins around NC_009767_17

CRISPR arrays

The CRISPR arrays of NC_009767_17

>merge|NC_009767|17|951630-951738|CRISPRCasFinder
GTGACCATGCCGGATGGTCACAGGTCATTGGTATAAGCCGGCTAGCCGGCGCGCAATCTCATCAGGATTGGCAGTGACCACGCCGGATGGTCACAGGTCATTGGTATAA

>NC_009767|17|16|951630-951738|CRISPRCasFinder
GTGACCATGCCGGATGGTCACAGGTCATTGGTATAA	GCCGGCTAGCCGGCGCGCAATCTCATCAGGATTGGCA
GTGACCACGCCGGATGGTCACAGGTCATTGGTATAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119281.1|952987_953764_-|anti-sigma-factor	unknown	unknown	gnl|CDD|236090
NC_009767.1|WP_012119275.1|946885_948151_+|Glu/Leu/Phe/Val-dehydrogenase	unknown	unknown	gnl|CDD|223411
NC_009767.1|WP_012119272.1|943985_944264_+|hypothetical-protein	unknown	unknown	gnl|CDD|223090
NC_009767.1|WP_012119276.1|948193_949180_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|372253
NC_009767.1|WP_157042772.1|946184_946832_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|223532
NC_009767.1|WP_012119280.1|952380_952956_-|hypothetical-protein	unknown	unknown	gnl|CDD|378149
NC_009767.1|WP_012119271.1|943301_943979_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009767.1|WP_012119283.1|954521_956960_-|two-component-sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_009767.1|WP_012119286.1|961277_962144_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl|CDD|223268
NC_009767.1|WP_012119285.1|959305_960385_-|low-specificity-L-threonine-aldolase	unknown	unknown	gnl|CDD|178323
NC_009767.1|WP_012119270.1|942769_943276_+|crossover-junction-endodeoxyribonuclease-RuvC	unknown	unknown	gnl|CDD|234587
NC_009767.1|WP_012119277.1|949163_950114_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009767.1|WP_012119288.1|963790_964729_+|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl|CDD|234929
NC_009767.1|WP_012119287.1|962720_963785_+|bifunctional-N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	unknown	unknown	gnl|CDD|224128
NC_009767.1|WP_012119282.1|953820_954426_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|236608
NC_009767.1|WP_012119269.1|941998_942766_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|234640
NC_009767.1|WP_012119284.1|957450_958908_+|polymerase	unknown	unknown	gnl|CDD|273357
NC_009767.1|WP_041330175.1|950127_951312_-|hypothetical-protein	unknown	unknown	gnl|CDD|224387
NC_009767.1|WP_012119268.1|939957_941874_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl|CDD|273520
NC_009767.1|WP_157042773.1|951974_952376_+|response-regulator	unknown	unknown	gnl|CDD|381085

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119281.1|952987_953764_-|anti-sigma-factor	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	4.74523e-06
NC_009767.1|WP_012119275.1|946885_948151_+|Glu/Leu/Phe/Val-dehydrogenase	gnl|CDD|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	0
NC_009767.1|WP_012119272.1|943985_944264_+|hypothetical-protein	gnl|CDD|223090	COG0011, COG0011, Uncharacterized conserved protein [Function unknown].	1.3856e-06
NC_009767.1|WP_012119276.1|948193_949180_-|ABC-transporter-permease	gnl|CDD|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	6.49292e-23
NC_009767.1|WP_157042772.1|946184_946832_+|GNAT-family-N-acetyltransferase	gnl|CDD|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	1.38047e-14
NC_009767.1|WP_012119280.1|952380_952956_-|hypothetical-protein	gnl|CDD|378149	pfam09335, VTT, VMP1, TMEM41, and TVP38 (VTT) domain. The VTT domain was previously called the SNARE-associated domain, but was renamed as there seems to be no evidence for association with SNARE proteins.	1.79009e-08
NC_009767.1|WP_012119271.1|943301_943979_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.57382e-23
NC_009767.1|WP_012119283.1|954521_956960_-|two-component-sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.80528e-33
NC_009767.1|WP_012119286.1|961277_962144_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	gnl|CDD|223268	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism].	2.94391e-126
NC_009767.1|WP_012119285.1|959305_960385_-|low-specificity-L-threonine-aldolase	gnl|CDD|178323	PLN02721, PLN02721, threonine aldolase.	4.619e-151
NC_009767.1|WP_012119270.1|942769_943276_+|crossover-junction-endodeoxyribonuclease-RuvC	gnl|CDD|234587	PRK00039, ruvC, Holliday junction resolvase; Reviewed.	1.42974e-85
NC_009767.1|WP_012119277.1|949163_950114_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.90035e-98
NC_009767.1|WP_012119288.1|963790_964729_+|ribose-phosphate-pyrophosphokinase	gnl|CDD|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	4.96009e-172
NC_009767.1|WP_012119287.1|962720_963785_+|bifunctional-N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	gnl|CDD|224128	COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane].	1.27785e-129
NC_009767.1|WP_012119282.1|953820_954426_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	3.88741e-52
NC_009767.1|WP_012119269.1|941998_942766_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl|CDD|234640	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator.	4.07584e-137
NC_009767.1|WP_012119284.1|957450_958908_+|polymerase	gnl|CDD|273357	TIGR00947, 2A73, putative bicarbonate transporter, IctB family. This family of proteins is suggested to transport inorganic carbon (HCO3-), based on the phenotype of a mutant of IctB in Synechococcus sp. strain PCC 7942. Bicarbonate uptake is used by many photosynthetic organisms including cyanobacteria. These organisms are able to concentrate CO2/HCO3- against a greater than ten-fold concentration gradient. Cyanobacteria may have several such carriers operating with different efficiencies. Note that homology to various O-antigen ligases, with possible implications for mutant cell envelope structure, might allow alternatives to the interpretation of IctB as a bicarbonate transport protein. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	5.87343e-15
NC_009767.1|WP_041330175.1|950127_951312_-|hypothetical-protein	gnl|CDD|224387	COG1470, COG1470, Predicted membrane protein [Function unknown].	5.78563e-41
NC_009767.1|WP_012119268.1|939957_941874_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl|CDD|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NC_009767.1|WP_157042773.1|951974_952376_+|response-regulator	gnl|CDD|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	1.47286e-11

Protein sequences

>NC_009767.1|WP_041330175.1|950127_951312_-|hypothetical-protein
MRALRLMIVFITLVVLTVSAAAPVQAQEQDPQQTPRDLFLFTRYPVQEAIIGDPTTIRLTLGTDTTPQIVRLTTRNAPDGWNVSFRGDGKVIQAVYVYPKNEASVDFRVEPPKDVAAGTYRLTIVASGETREVTLPIELILKDKETSSTGLTLDVDLPRLRGTSGTTFRYNITVKNESDRETPVSLIAEAPRGFQIDFRFGGQSITSIPFGPNESKSLSLEVRPLPDIPAGSYEIPVLVQGGEYRATTTLVAELTGQPQLVLTTPDGRLSGEARIGEKTAIKLVVRNTGSAPARNIQLSASPPIGWTVEFEPQTISELANNQTVEVTANIQPSNQAIAGDYVVNLTARTDEGASDSAEFRVTVLTSTLWGLVGVALIAIAVVGVGMAVMRFGRR
>NC_009767.1|WP_012119277.1|949163_950114_-|ABC-transporter-ATP-binding-protein
MDETVVECRDLTKQYESLVAVDRLNLTVRKGEIFGLLGPNGAGKTTTILMLLGLTEPTSGSVRVLGLDPARQPLSVKSRVGYLPDQVGFYDGLTARENLSYIAKLNGIRGREMQDRIRAALGQVGLSDVADRRVGTFSRGMRQRLGVAEVLLKRPQLIIMDEPTLALDPEAVREFLDLIRRLKADGMTIMLSSHLLHQVQAVCDRVGLFHKGRMVLEGTVGDLAQHVLGGAYRIHVEADGGTALDEALRKIPDVVQVTCDGARTYHIEARSDLRADIARAIVEAGGRLLALSADMPRLDEIYTRYFQKEAAYATAA
>NC_009767.1|WP_012119276.1|948193_949180_-|ABC-transporter-permease
MLRQPESLPLGRQREGSPWTGLWAVVAKEMADYLTSARMLILEALIVLTATGTVYAASQSLRDGAGGDTFLFLQLFTTAREPLPAFVGFLGLLVPLLGIALAFDSVNGEFNQRTISKVLAQPIYRDALLFGKFLAGLGALALTLTAIWLLIVGMGLVRLGVPPDGEEVVRSLWFLLVTIFYGGVWLALAMLFSIVFRQPATAALAAIAVWLFFTAFWGIIASLLANLLRPVPPGDPLALIDQVQLELALARISPNTLFTEVALATLNPTVRSLGIILPIQLHGAVLGTPLPATQSMLLTWPHATGLIAATIVLFALGYVLFQRQEIRA
>NC_009767.1|WP_012119275.1|946885_948151_+|Glu/Leu/Phe/Val-dehydrogenase
MRSDRDNPFRIAQEQFDRAAALLELPDNVREVLRVPQRELTVRFPVMMDDGSTRIFTGYRVQHNLGRGPTKGGIRYHPSVDIDEVRALAMWMTWKCALVNIPYGGAKGGVVCDPAQLSSGELERLTRRFATEVAIVVGSERDIPAPDVNTNPQIMAWFMDTLSMQQGHTINAVVTGKPIEVGGSLGRNEATGRGVSLMVREWARRQRRRLEDLRVVVQGFGNVGGVAASLISALGCRVIAVGDASGGYLCRNGLNIAEMRRYAAQHPRRLLEGYSAPGVERIDNRALLETPCDVLVPAALENQITDQNAERIRATLIVEGANGPTTPQADEILEERGIVVVPDILANAGGVTVSYFEWVQGLQSFFWNEQDVNHRLEQIMVSAFEQVCDLADRRGISLRLAAYLLAVRRVADANLIRGLYP
>NC_009767.1|WP_157042772.1|946184_946832_+|GNAT-family-N-acetyltransferase
MLTISRVVTPALIPLQIRAARMDDIYPILRLHCEAFADKFGAAFGVHGTARGIEAMAEAWRRQGRSALRGMFVAESNGLVVGTVSLRTWDTASDTSGAAELAFHQVLGVWGAVRSIFALSLLEHAIERSEGYITDVAVLARYRRNGIARALLDHVEQEARQRGKRFLGLYVSASNTPARRLYASVGFVDHRTRRSWLAALILRQRTWIYMRKELG
>NC_009767.1|WP_012119272.1|943985_944264_+|hypothetical-protein
MVHRDHPVGLTAQVSLYPLRQEHLSPAIDAALALWRERGLDVRPGAMSTLIAGEEATVWEALRAAFAAAAACGETVMVVTVSNACPWVSSTQ
>NC_009767.1|WP_012119271.1|943301_943979_+|class-I-SAM-dependent-methyltransferase
MRGDVTAAPLNPFDAPELAVGYEAWYATEGRAADQAERRLLTWLLSGLPQPQTLVEIGVGTGHFARWLASEGYRVVGVDRSAPMLAEALQRGSVPLIRADAADLPFANDAFDVALLITTLEFLPCPERALQEAARVARQGMILGVLNRWHPLAWQRKRSGLSVWQVARFYAPPELARLVHQALHRSVASMTWRTTLLPAPWVQSSSRLPVGAFIGMRVVLSKWKG
>NC_009767.1|WP_012119270.1|942769_943276_+|crossover-junction-endodeoxyribonuclease-RuvC
MIASRTIGIDPGTARMGWGIVEETGGTVSLVDCGVLTTPAGVSQASRLLQLYNDLCSLIARYHPAAAAIEELFFGKNVNTALNVGQARGIALLAFAQAGIPVHEYKPLQVKQALAGYGGADKRQVQEMVRLTLRLPTIPRPDDAADAVAVAICHTYAAPMLRRIGEGR
>NC_009767.1|WP_012119269.1|941998_942766_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MSGHSKWHSIRRTKGVLDQRRGQLFTKLARDITIATREGGSGDPEANFRLRLAVDKARAANMPMDNIQRAIDRGLGRGGSDAAALEEIYYEGYAPGGVALLIEAATDNRNRTASDVRATMTKNGGSPGEPGSVSWMFETRGLITIDLSVKRLDPDEVMLIAIDAGAEDVQIEDDIVEVYTDFKQLAAVRQQLIAAGLPVTGAEKTMIAKTTVQPDTADALKAMRLIEKLEDLDDVQKVYSNLEITSELAEQFVSG
>NC_009767.1|WP_012119268.1|939957_941874_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MGDNRWLKNSFVYLIILVAALALFFNYFNNAQGQAEERGIYQVLADAKAGRVEKIEAQSGNTEILVTYRDTRTKVRSRIESNDSITMLLVQAGVPLDAVNVEVRAAPAWGGLLNVFTILLPVLLMIGFFVFFMRQAQGSNNQALSFGKSRARMFSGDKPTVTFADVAGQEEAKQDLTEVVEFLKFPDKFAALGARIPRGVLMVGPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQTLNQILVEMDGFDTNTNVIVIAATNRPDVLDPALVRPGRFDRQVVLDAPDVKGRIEVLRVHTKGKPLADDVQLDVIARQTPGFSGADLANAVNEAAILAARRSKKKIGMAELQDAIERVALGGPERRSRVLTEREKLLTAYHESGHAIAAAGMPKAFPVQKVTIVPRGRAGGYTLYLPEEDSIRYTTASQFAAQLVSALGGRVAEEIVFGPDEVSTGAAGDIQQVTRIARAMVTRYGMSAKLGPIAFGEREELIFLGREITEQRNYSDAVAREIDNEVHRIVSEAYERTRLILTYNREVLNDMASALIEYETLDGERLKELISRVVKIDEIERRPNGGNGVLDTSSTLTAPQA
>NC_009767.1|WP_157042773.1|951974_952376_+|response-regulator
MKEVRQGRILVVEEDYDLGRLFEAMLSIEGYHVTVTRHPDEAHRLLPQLEPNLIVFDWSFHNTRGYVWIDELRTSNHTAHIPVLLVCGAPPPRSIYEMLANAGVPIIEKPFDLIAFNRCIAALMHSRERAIGA
>NC_009767.1|WP_012119280.1|952380_952956_-|hypothetical-protein
MSEAGSQATGKQNAIPTRRRAWMRPVLVAAIAITLNIIAYLTIPPDLAYRLGAFGYLGVFLITLISNATIVIPIPYFGLVAALSPGLSMVGVGIAGALGSVIGESVGFFVGRSGRGVVEQTRFYRWVQRQLEHPWRAFFVLFALSAPPNPAFDVAGITAGAMGLPYWIFLIAVFLARLVRFGMIALFGGAT
>NC_009767.1|WP_012119281.1|952987_953764_-|anti-sigma-factor
MTTQPQLSEHDLEILSAYIDGQVSADERRALERRLQEDAALRLAYEEMRATVQALRDLEPLRPPRSFTLDPARIAAQRPPAARLGWGRLLQVAGVFAGVLIVAIGVLNVLGSMRAGAPSMAVQPTAPAAAPFAVAPTEPPTTAAEVRESIPGSTVTAPIPHGGAAAPAALDNGAEAGTPQALTTIRATPELAMQPEVAPQPTIAPPAISSPGTVDLAQPTPLAEPSTPAGAPDPTLLLVVAVIVVLAGGVWLWRRSRG
>NC_009767.1|WP_012119282.1|953820_954426_-|sigma-70-family-RNA-polymerase-sigma-factor
MANEELRLVAAAQRGDVESFNALVRLYEGRVYNLCYRLLGDADSAADATQDAFLSAYRHLDAFRGGSFRSWVFRIATNVCYDALRARQRRPVVSLDAAGETSAEEPSSFQIADTSETPDEFALRRELARAIEAGLTQLPVDQRLVVVLCDLQGLTYEEIAEVTGANLGTIKSRLSRGRARLRDVLRQEELLPLRFRHEGEE
>NC_009767.1|WP_012119283.1|954521_956960_-|two-component-sensor-histidine-kinase
MDTKRHPFPWQASVLLIFAGAPLIAGTISFISALNLLGQPSIGILPLWQGAIRCNAVSPITPPSWPGMASGALQTGDCIEMINDVSALTWPYRELERYADSHNQSNLVDLIIRRGGEPLIVRVPVLRLTWLHVLQLQAGIIPIILVVWTLALVVLLAQPHTEANRVFAALFLVLALAIAGLFHGLNDAEGRYYTAFTIVSSMAWIGPLLHHLALLTPRPLPRFAFLRFALHPIGLAAMTLHLDSMLEFVPLLQPWRGSAPGVASAINGVTMLIGLAAFLGRVGFWAWRGDRSIADQMWVLLMSWGLGAGPLTLASAYYLLTYRAPLWTSLQPFLFCLLILCTGTAYAMLRYQSFAYRGRVLNVLAMIYLSAAIACVVMVIVLIGIFRTPVDGLLFMALWSATFATTLFWHTDSPFRRLYRRFFLRHQHHYQATLDFATRMNQTSDLDALVQQGATLIRQAVMSDWVAVRHALASDRIWLATATIIEIRQANPPHADTTCLPETPAVICQLASEGELLGTLYVGARHVPEPLDEEDERLIGLLATMLAHAMHIRAQIQRLSEVPALMIAAQEQERERIAQEIHDGVLPVLGALPFGLTQIEQSVQTGAPADTIISICEAYRERAVRTTRELRSILRHLQPPIVGGTHLGLSIQAFTQEICNLYQVQATIHGATVVYPLDEFTSRHAYRIIQQAIVNALQHARPDRLDVSIEAEQHGWTCRVSDNGHGFDPQQSSQTNGFGIFSMRERARIIGATLTIESQPGQGTTVTLRVKGKKREGRKESGALNIEGGQSTPLRYSSEALRVENESTRIAS
>NC_009767.1|WP_012119284.1|957450_958908_+|polymerase
MSLLSHSPRDDLAITLGRSPLIAALAAVLLGVIGGAGVAFGPFWLGFAALAALMGVYALLIDTRVGLAVVIGIATIIPFATLPFRAVVTPTLLTLALAALMGVWSLRLLVRRDERLIVTPIGLAIIGFLGITLFAFLLGSNASPEPSLIHNYVKFVMATLFFFSVVNCVRDRETVRWVIRFLIIGAALSALIALVLYVIPDQLALQILVSFGRIGYPTEGRVLRYVEDDPNGLMRAIGLSVDPNSFGGMLALIGALAATQAVSERPALPRRLLLIATGAILLALFLTYSRAALGGMIVAAMYVATLRYRRLWWVILAVGALAAALFIGLGVGERFVERVVEGVQFRDRANQMRLAEYQNAIAIIQAYPVFGIGFGQAPEIDLVAGVSSIYLAIAQRTGLVGLTAFLSIIAWFFARNWSVLRAAARSGDEERAAWLVALQAALAAALAVGLLDHYFFNIEFSHMSALLWGTVGLAVAIEGLEEETD
>NC_009767.1|WP_012119285.1|959305_960385_-|low-specificity-L-threonine-aldolase
MPSKPIDLRSDTVTLPTPAMRTAMARAEVGDDVYGEDPTINRLEEFAAQRVGKAAAMFVPSGTMGNLCALLAHCQRGDEVIVGDASHIYNYEAGGASVVGGVAFHVLPNQPDGTIALDHLRAAVRWLDDPHCAETRLICLENTHNSCGGVALSPEYLASVAAFARERGLLVHLDGARMFNAAIALSVDVTELTRHVDSVMFCLSKGLAAPVGSVVCGDEAFIRRARRARKVLGGSMRQAGVIAAAGIVALETMVDRLEEDHANARMLAEGLAGFPQIVIEPERVQTNIVIFTLRDGISAEEFVVRLRERGVLMGDMGGGRVRAVTHYGIDAGDITETLAVAEEVLRAGSGVRDQGFPLH
>NC_009767.1|WP_012119286.1|961277_962144_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase
MTAMILDGRALAKTLREELRADIQAFVQTTGVTPSLAVVKIAGDPASERYTRTIRKGCEDIGIVFYDHTLPPDTTQAALEETLHALSFDRAVNGILLHLPLPPGFDSNRAIAQIDPHKDVDGVHPYNAGLLAMGQPTMVPNTPAGGMELLLRNHILIKGQRATVVGRSVVVGKPMALLLLQEHATVTIAHSRTKDLASVVREADIVVAATGKPGLITADMVRPGAVVVDFGVNVLGDGKVVGDVDFAGVAEIASAITPVPGGTGPVTNIMLLRNVLRAARLQGVGRGE
>NC_009767.1|WP_012119287.1|962720_963785_+|bifunctional-N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase
MIPFFTTVRLGVVVLAAGEGTRMRSALPKVLHPLCGRPLIGHILAAVDALQPAIGTIVLASDALDTVRARFGDTYRYVVQSERLGTGHATLQARSIMVNQCDDALVLVGDAPLIRSATLQRLVALRREQNALVALLSFTADPPTGYGRVIRDAEGNVTAIVEERDATDTQRAVTEVNSGILCFDAAWMWPALDRIQRSPVKGEYYLTDLVALAIADHGIGAVQALRADDPSETLGVNDRVQLAQAEHVLRLRLLDALMRSGVTVVDPAATYVDVDVVVGQDTTLLPGTMLRGATRVGARCTIGPHTSLIDTIVADDAHVRYTLAEGVVIPAHAVIGPFAHLRGAQHAVDEVYQA
>NC_009767.1|WP_012119288.1|963790_964729_+|ribose-phosphate-pyrophosphokinase
MEGRLQIFSGNANRSLAQEIASHLNINLGRAMVGTFKNGETRVKVEENVRGSDVFVVQPTCTPVNHNLMELLLLIDALRRASAARVTAVIPYYGYAKQEKKTTGREPISAKLVANLIRTAGADRVLTMDLHAPAIEGFFDIPVDHLQAGPILAEHVREMNLPRLVVVSPDAGGVGRANSFRERIGAGLAIIAKQRPQPDVAEMLDMVGDVEGKTAVIVDDMISTGGTLAEAARVLRERGALAVYACATHGIFAGDATEIIAQSALVETIVTNTIPLPEGCRKARIRAISIAPLFAEAIMRIHKDLSLSALFS

Crispr_ID: NC_009767_18

• CRISPR_ID: NC_009767_18
• CRISPR_location: 962441-962556
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_18

Consensus_repeat	Method
TTCCCTTTGCACTCTCTTGCCTCTCGTCTCTTACCTCGCACC	CRISPRCasFinder

spacers of NC_009767_18

>18.1|962483|32|NC_009767|CRISPRCasFinder
CAGGAATATTCCTCGTTGGGCATGGTCTCTTC

CRISPR arrays and Neighbor proteins around NC_009767_18

CRISPR arrays

The CRISPR arrays of NC_009767_18

>merge|NC_009767|18|962441-962556|CRISPRCasFinder
TTCCCTTTGCACTCTCTTGCCTCTCGTCTCTTACCTCGCACCCAGGAATATTCCTCGTTGGGCATGGTCTCTTCTTCCCTTTGCACTCTCTTGCCTCTCGTCTCTTACCTCGCACC

>NC_009767|18|17|962441-962556|CRISPRCasFinder
TTCCCTTTGCACTCTCTTGCCTCTCGTCTCTTACCTCGCACC	CAGGAATATTCCTCGTTGGGCATGGTCTCTTC
TTCCCTTTGCACTCTCTTGCCTCTCGTCTCTTACCTCGCACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119281.1|952987_953764_-|anti-sigma-factor	unknown	unknown	gnl|CDD|236090
NC_009767.1|WP_012119293.1|970253_971198_+|DMT-family-transporter	unknown	unknown	gnl|CDD|273359
NC_009767.1|WP_012119290.1|966062_966476_+|cytidine-deaminase	unknown	unknown	gnl|CDD|273572
NC_009767.1|WP_012119294.1|971720_973763_-|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NC_009767.1|WP_012119289.1|964762_966070_+|HlyC/CorC-family-transporter	unknown	unknown	gnl|CDD|224173
NC_009767.1|WP_012119291.1|966820_969319_-|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|100097
NC_009767.1|WP_012119283.1|954521_956960_-|two-component-sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_009767.1|WP_012119284.1|957450_958908_+|polymerase	unknown	unknown	gnl|CDD|273357
NC_009767.1|WP_012119286.1|961277_962144_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl|CDD|223268
NC_009767.1|WP_012119292.1|969579_969969_-|hypothetical-protein	unknown	unknown	gnl|CDD|130896
NC_009767.1|WP_012119285.1|959305_960385_-|low-specificity-L-threonine-aldolase	unknown	unknown	gnl|CDD|178323
NC_009767.1|WP_012119280.1|952380_952956_-|hypothetical-protein	unknown	unknown	gnl|CDD|378149
NC_009767.1|WP_012119288.1|963790_964729_+|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl|CDD|234929
NC_009767.1|WP_041330179.1|975245_976703_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119282.1|953820_954426_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|236608
NC_009767.1|WP_012119287.1|962720_963785_+|bifunctional-N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	unknown	unknown	gnl|CDD|224128
NC_009767.1|WP_012119295.1|973899_975126_+|MFS-transporter	unknown	unknown	gnl|CDD|183255
NC_009767.1|WP_041330175.1|950127_951312_-|hypothetical-protein	unknown	unknown	gnl|CDD|224387
NC_009767.1|WP_012119277.1|949163_950114_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009767.1|WP_157042773.1|951974_952376_+|response-regulator	unknown	unknown	gnl|CDD|381085

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119281.1|952987_953764_-|anti-sigma-factor	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	4.74523e-06
NC_009767.1|WP_012119293.1|970253_971198_+|DMT-family-transporter	gnl|CDD|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	6.54907e-16
NC_009767.1|WP_012119290.1|966062_966476_+|cytidine-deaminase	gnl|CDD|273572	TIGR01354, Cytidine_deaminase, cytidine deaminase, homotetrameric. This small, homotetrameric zinc metalloprotein is found in humans and most bacteria. A related, homodimeric form with a much larger subunit is found in E. coli and in Arabidopsis. Both types may act on deoxycytidine as well as cytidine. [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides].	3.82223e-49
NC_009767.1|WP_012119294.1|971720_973763_-|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.9583e-65
NC_009767.1|WP_012119289.1|964762_966070_+|HlyC/CorC-family-transporter	gnl|CDD|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	4.49856e-118
NC_009767.1|WP_012119291.1|966820_969319_-|NTP-transferase-domain-containing-protein	gnl|CDD|100097	cd05805, MPG1_transferase, GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	4.30892e-177
NC_009767.1|WP_012119283.1|954521_956960_-|two-component-sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.80528e-33
NC_009767.1|WP_012119284.1|957450_958908_+|polymerase	gnl|CDD|273357	TIGR00947, 2A73, putative bicarbonate transporter, IctB family. This family of proteins is suggested to transport inorganic carbon (HCO3-), based on the phenotype of a mutant of IctB in Synechococcus sp. strain PCC 7942. Bicarbonate uptake is used by many photosynthetic organisms including cyanobacteria. These organisms are able to concentrate CO2/HCO3- against a greater than ten-fold concentration gradient. Cyanobacteria may have several such carriers operating with different efficiencies. Note that homology to various O-antigen ligases, with possible implications for mutant cell envelope structure, might allow alternatives to the interpretation of IctB as a bicarbonate transport protein. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	5.87343e-15
NC_009767.1|WP_012119286.1|961277_962144_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	gnl|CDD|223268	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism].	2.94391e-126
NC_009767.1|WP_012119292.1|969579_969969_-|hypothetical-protein	gnl|CDD|130896	TIGR01837, to_the_polyhydroxyalkanoate_inclusion, poly(hydroxyalkanoate) granule-associated protein. This model describes a domain found in some proteins associated with polyhydroxyalkanoate (PHA) granules in a subset of species that have PHA inclusion granules. Included are two tandem proteins of Pseudomonas oleovorans, PhaI and PhaF, and their homologs in related species. PhaF proteins have a low-complexity C-terminal region with repeats similar to AAAKP. [Fatty acid and phospholipid metabolism, Biosynthesis].	2.77087e-14
NC_009767.1|WP_012119285.1|959305_960385_-|low-specificity-L-threonine-aldolase	gnl|CDD|178323	PLN02721, PLN02721, threonine aldolase.	4.619e-151
NC_009767.1|WP_012119280.1|952380_952956_-|hypothetical-protein	gnl|CDD|378149	pfam09335, VTT, VMP1, TMEM41, and TVP38 (VTT) domain. The VTT domain was previously called the SNARE-associated domain, but was renamed as there seems to be no evidence for association with SNARE proteins.	1.79009e-08
NC_009767.1|WP_012119288.1|963790_964729_+|ribose-phosphate-pyrophosphokinase	gnl|CDD|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	4.96009e-172
NC_009767.1|WP_012119282.1|953820_954426_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	3.88741e-52
NC_009767.1|WP_012119287.1|962720_963785_+|bifunctional-N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	gnl|CDD|224128	COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane].	1.27785e-129
NC_009767.1|WP_012119295.1|973899_975126_+|MFS-transporter	gnl|CDD|183255	PRK11646, PRK11646, multidrug efflux MFS transporter MdtH.	2.32263e-101
NC_009767.1|WP_041330175.1|950127_951312_-|hypothetical-protein	gnl|CDD|224387	COG1470, COG1470, Predicted membrane protein [Function unknown].	5.78563e-41
NC_009767.1|WP_012119277.1|949163_950114_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.90035e-98
NC_009767.1|WP_157042773.1|951974_952376_+|response-regulator	gnl|CDD|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	1.47286e-11

Protein sequences

>NC_009767.1|WP_012119286.1|961277_962144_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase
MTAMILDGRALAKTLREELRADIQAFVQTTGVTPSLAVVKIAGDPASERYTRTIRKGCEDIGIVFYDHTLPPDTTQAALEETLHALSFDRAVNGILLHLPLPPGFDSNRAIAQIDPHKDVDGVHPYNAGLLAMGQPTMVPNTPAGGMELLLRNHILIKGQRATVVGRSVVVGKPMALLLLQEHATVTIAHSRTKDLASVVREADIVVAATGKPGLITADMVRPGAVVVDFGVNVLGDGKVVGDVDFAGVAEIASAITPVPGGTGPVTNIMLLRNVLRAARLQGVGRGE
>NC_009767.1|WP_012119285.1|959305_960385_-|low-specificity-L-threonine-aldolase
MPSKPIDLRSDTVTLPTPAMRTAMARAEVGDDVYGEDPTINRLEEFAAQRVGKAAAMFVPSGTMGNLCALLAHCQRGDEVIVGDASHIYNYEAGGASVVGGVAFHVLPNQPDGTIALDHLRAAVRWLDDPHCAETRLICLENTHNSCGGVALSPEYLASVAAFARERGLLVHLDGARMFNAAIALSVDVTELTRHVDSVMFCLSKGLAAPVGSVVCGDEAFIRRARRARKVLGGSMRQAGVIAAAGIVALETMVDRLEEDHANARMLAEGLAGFPQIVIEPERVQTNIVIFTLRDGISAEEFVVRLRERGVLMGDMGGGRVRAVTHYGIDAGDITETLAVAEEVLRAGSGVRDQGFPLH
>NC_009767.1|WP_012119284.1|957450_958908_+|polymerase
MSLLSHSPRDDLAITLGRSPLIAALAAVLLGVIGGAGVAFGPFWLGFAALAALMGVYALLIDTRVGLAVVIGIATIIPFATLPFRAVVTPTLLTLALAALMGVWSLRLLVRRDERLIVTPIGLAIIGFLGITLFAFLLGSNASPEPSLIHNYVKFVMATLFFFSVVNCVRDRETVRWVIRFLIIGAALSALIALVLYVIPDQLALQILVSFGRIGYPTEGRVLRYVEDDPNGLMRAIGLSVDPNSFGGMLALIGALAATQAVSERPALPRRLLLIATGAILLALFLTYSRAALGGMIVAAMYVATLRYRRLWWVILAVGALAAALFIGLGVGERFVERVVEGVQFRDRANQMRLAEYQNAIAIIQAYPVFGIGFGQAPEIDLVAGVSSIYLAIAQRTGLVGLTAFLSIIAWFFARNWSVLRAAARSGDEERAAWLVALQAALAAALAVGLLDHYFFNIEFSHMSALLWGTVGLAVAIEGLEEETD
>NC_009767.1|WP_012119283.1|954521_956960_-|two-component-sensor-histidine-kinase
MDTKRHPFPWQASVLLIFAGAPLIAGTISFISALNLLGQPSIGILPLWQGAIRCNAVSPITPPSWPGMASGALQTGDCIEMINDVSALTWPYRELERYADSHNQSNLVDLIIRRGGEPLIVRVPVLRLTWLHVLQLQAGIIPIILVVWTLALVVLLAQPHTEANRVFAALFLVLALAIAGLFHGLNDAEGRYYTAFTIVSSMAWIGPLLHHLALLTPRPLPRFAFLRFALHPIGLAAMTLHLDSMLEFVPLLQPWRGSAPGVASAINGVTMLIGLAAFLGRVGFWAWRGDRSIADQMWVLLMSWGLGAGPLTLASAYYLLTYRAPLWTSLQPFLFCLLILCTGTAYAMLRYQSFAYRGRVLNVLAMIYLSAAIACVVMVIVLIGIFRTPVDGLLFMALWSATFATTLFWHTDSPFRRLYRRFFLRHQHHYQATLDFATRMNQTSDLDALVQQGATLIRQAVMSDWVAVRHALASDRIWLATATIIEIRQANPPHADTTCLPETPAVICQLASEGELLGTLYVGARHVPEPLDEEDERLIGLLATMLAHAMHIRAQIQRLSEVPALMIAAQEQERERIAQEIHDGVLPVLGALPFGLTQIEQSVQTGAPADTIISICEAYRERAVRTTRELRSILRHLQPPIVGGTHLGLSIQAFTQEICNLYQVQATIHGATVVYPLDEFTSRHAYRIIQQAIVNALQHARPDRLDVSIEAEQHGWTCRVSDNGHGFDPQQSSQTNGFGIFSMRERARIIGATLTIESQPGQGTTVTLRVKGKKREGRKESGALNIEGGQSTPLRYSSEALRVENESTRIAS
>NC_009767.1|WP_012119282.1|953820_954426_-|sigma-70-family-RNA-polymerase-sigma-factor
MANEELRLVAAAQRGDVESFNALVRLYEGRVYNLCYRLLGDADSAADATQDAFLSAYRHLDAFRGGSFRSWVFRIATNVCYDALRARQRRPVVSLDAAGETSAEEPSSFQIADTSETPDEFALRRELARAIEAGLTQLPVDQRLVVVLCDLQGLTYEEIAEVTGANLGTIKSRLSRGRARLRDVLRQEELLPLRFRHEGEE
>NC_009767.1|WP_012119281.1|952987_953764_-|anti-sigma-factor
MTTQPQLSEHDLEILSAYIDGQVSADERRALERRLQEDAALRLAYEEMRATVQALRDLEPLRPPRSFTLDPARIAAQRPPAARLGWGRLLQVAGVFAGVLIVAIGVLNVLGSMRAGAPSMAVQPTAPAAAPFAVAPTEPPTTAAEVRESIPGSTVTAPIPHGGAAAPAALDNGAEAGTPQALTTIRATPELAMQPEVAPQPTIAPPAISSPGTVDLAQPTPLAEPSTPAGAPDPTLLLVVAVIVVLAGGVWLWRRSRG
>NC_009767.1|WP_012119280.1|952380_952956_-|hypothetical-protein
MSEAGSQATGKQNAIPTRRRAWMRPVLVAAIAITLNIIAYLTIPPDLAYRLGAFGYLGVFLITLISNATIVIPIPYFGLVAALSPGLSMVGVGIAGALGSVIGESVGFFVGRSGRGVVEQTRFYRWVQRQLEHPWRAFFVLFALSAPPNPAFDVAGITAGAMGLPYWIFLIAVFLARLVRFGMIALFGGAT
>NC_009767.1|WP_157042773.1|951974_952376_+|response-regulator
MKEVRQGRILVVEEDYDLGRLFEAMLSIEGYHVTVTRHPDEAHRLLPQLEPNLIVFDWSFHNTRGYVWIDELRTSNHTAHIPVLLVCGAPPPRSIYEMLANAGVPIIEKPFDLIAFNRCIAALMHSRERAIGA
>NC_009767.1|WP_041330175.1|950127_951312_-|hypothetical-protein
MRALRLMIVFITLVVLTVSAAAPVQAQEQDPQQTPRDLFLFTRYPVQEAIIGDPTTIRLTLGTDTTPQIVRLTTRNAPDGWNVSFRGDGKVIQAVYVYPKNEASVDFRVEPPKDVAAGTYRLTIVASGETREVTLPIELILKDKETSSTGLTLDVDLPRLRGTSGTTFRYNITVKNESDRETPVSLIAEAPRGFQIDFRFGGQSITSIPFGPNESKSLSLEVRPLPDIPAGSYEIPVLVQGGEYRATTTLVAELTGQPQLVLTTPDGRLSGEARIGEKTAIKLVVRNTGSAPARNIQLSASPPIGWTVEFEPQTISELANNQTVEVTANIQPSNQAIAGDYVVNLTARTDEGASDSAEFRVTVLTSTLWGLVGVALIAIAVVGVGMAVMRFGRR
>NC_009767.1|WP_012119277.1|949163_950114_-|ABC-transporter-ATP-binding-protein
MDETVVECRDLTKQYESLVAVDRLNLTVRKGEIFGLLGPNGAGKTTTILMLLGLTEPTSGSVRVLGLDPARQPLSVKSRVGYLPDQVGFYDGLTARENLSYIAKLNGIRGREMQDRIRAALGQVGLSDVADRRVGTFSRGMRQRLGVAEVLLKRPQLIIMDEPTLALDPEAVREFLDLIRRLKADGMTIMLSSHLLHQVQAVCDRVGLFHKGRMVLEGTVGDLAQHVLGGAYRIHVEADGGTALDEALRKIPDVVQVTCDGARTYHIEARSDLRADIARAIVEAGGRLLALSADMPRLDEIYTRYFQKEAAYATAA
>NC_009767.1|WP_012119287.1|962720_963785_+|bifunctional-N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase
MIPFFTTVRLGVVVLAAGEGTRMRSALPKVLHPLCGRPLIGHILAAVDALQPAIGTIVLASDALDTVRARFGDTYRYVVQSERLGTGHATLQARSIMVNQCDDALVLVGDAPLIRSATLQRLVALRREQNALVALLSFTADPPTGYGRVIRDAEGNVTAIVEERDATDTQRAVTEVNSGILCFDAAWMWPALDRIQRSPVKGEYYLTDLVALAIADHGIGAVQALRADDPSETLGVNDRVQLAQAEHVLRLRLLDALMRSGVTVVDPAATYVDVDVVVGQDTTLLPGTMLRGATRVGARCTIGPHTSLIDTIVADDAHVRYTLAEGVVIPAHAVIGPFAHLRGAQHAVDEVYQA
>NC_009767.1|WP_012119288.1|963790_964729_+|ribose-phosphate-pyrophosphokinase
MEGRLQIFSGNANRSLAQEIASHLNINLGRAMVGTFKNGETRVKVEENVRGSDVFVVQPTCTPVNHNLMELLLLIDALRRASAARVTAVIPYYGYAKQEKKTTGREPISAKLVANLIRTAGADRVLTMDLHAPAIEGFFDIPVDHLQAGPILAEHVREMNLPRLVVVSPDAGGVGRANSFRERIGAGLAIIAKQRPQPDVAEMLDMVGDVEGKTAVIVDDMISTGGTLAEAARVLRERGALAVYACATHGIFAGDATEIIAQSALVETIVTNTIPLPEGCRKARIRAISIAPLFAEAIMRIHKDLSLSALFS
>NC_009767.1|WP_012119289.1|964762_966070_+|HlyC/CorC-family-transporter
MDVEIGLVLAGILLCLFVLAFTSAIDAAMTAISRHRLGLLHETDARRAQVIDRLLAEPYRFKATVLLLNSTATITATALTLRLCDDQMWQWRLAALTGLLLGILIFAEALPKALAIGNPAATARALASPMALIARLLAPFIWVIGLLTRPFLRVASGQTTSSMPLVTEEELRMLVNVGEEEGLIEPEEREMIEGIFSFGDTTVREVMIPRVDIVALEETASIDEALNIIITTGHSRIPVYRETIDHIVGILYAKDLLLWLRSGQRDASIGALLRTAHFVPDTMKVDALLKDLQARKIHLAIVVDEYGGTAGLITIEDVIEEIVGEIQDEYDVDEQPIRVLAPGDMEVDARVPIDDINDLTGLRLASEESDRIGGMVFERLGRVPKVGDTVQIADGVTVVVLSMDGLRLRKLRLQYRLPQEDAISATPGEDRKNHE
>NC_009767.1|WP_012119290.1|966062_966476_+|cytidine-deaminase
MSELTPELTELLAAAAAARERAYCPYSRFAVGAAVRTASGMLFSGCNIENAAYPSAICAERVALFGAYAAGERAIVALAVIADTPEPVSPCGGCRQVIFELAPRAVVLLANLQGAWRIVSVEELLPAGFTFDRLSEP
>NC_009767.1|WP_012119291.1|966820_969319_-|NTP-transferase-domain-containing-protein
MKAVVMAGGEGSRLRPLTINRPKPMVPIVDRHVMAHIIELLKRHGITDIVVTVQYLANVIQDHFGDGSAYGVHIEYSLEEQPLGTAGSVKNAERFLREPFLVISGDALTDFDLTKIIEFHQSHGATATITLTRVPNPLDYGVVVVDERGYVRQFLEKPSWGEVFSDTVNTGIYVVTPEIFRYIEKGAFTDWSKDVFPRMLRSGNLPVGYVAEGYWTDIGTIEEYMRASRDYMQGKVNLPRVGERIFDEVWVEGDVEIAPDAQFHGPVFLGHGVKIKSGAIIHGPSAIRDYTIIDTRATIDRSIIWRNSYIGERAELRGAIVMRQCNIKSRAVLFEGTVVGDQTIINAGAVIGANVKIWPSKEVEEGATISSSIIWGSQGRRVLFGRSGISGLVNIDLTPEFGARLGAAFGATLPRGAVVTTSRDTHYTPRMIKRGLVAGLPSAGVHVAELHDVPLPVARVITRAINAAGGVHVRLSPLDSRVVDIKFFDADGLDIDTATERKIEGVFFREDYRRVYLDEIGRINEVEHINQIYTDMFLGALRPDALASIARNFQVVIDYANANTSNFLPAILRRLHIEAVELNANLDAQLLFQTPQQFEAGMERLARITPVLEASLGARLDAGGEKIFLVDDTGKRLPGMQALAAITALALAVNGGGTVAVPVTAPRAFEMIAAKYGGRIVRTRATLGALMRTAAASRDMLLLGDGAGSVIFPSFYPIADGMFAIVKIVELLALQQVRLSEIVRDLPHYFMSQARVPCRWEFKGKVMRILNQQYQDRKLDQVDGVKIDLGDEWVLILPDPDGPFFHVIAEGSSDEQARVLAEKYAGLVTGLQ
>NC_009767.1|WP_012119292.1|969579_969969_-|hypothetical-protein
MTEEVEVKVTEVEESAPGANKWIIDGMRRLLLASFGAVAMTFDEVEAFVKKLVERGELAQKDAEKLLHEMQNRLTANRPQVEKVSDRVEQGMEEFLNRLNIPSKRDIDELSQKIAQLAARVEELRKSQE
>NC_009767.1|WP_012119293.1|970253_971198_+|DMT-family-transporter
MQPHARTGYALSALAAVVWASTAPGLSYLITRYAIPGLTLALWRDLLIAVVCAGGLLAFRPALLRIGTRAIVQLALTGMISIGMYHALWLWSVTLNGAAIAVVLIYTYPVFVALGAWLLFREQITKAHIVALALALAGCALVVRAYDPAILRISWTGAVIGLLTALTHTVYVLIGQRNAPSISPWTTLAYTMIFGALTLVALALAADYLAPSTRSYLWSIEAPSAWVILAMIAVGPTLGGYALFTQSLRYIPGKVAGLISVIEAPVAALIAVTLLGERLELLQVVGIVLILVAVVLPRFAARVQQTATLVASRG
>NC_009767.1|WP_012119294.1|971720_973763_-|diguanylate-cyclase
MTQAGHSETRPHADAFLHARAVNHSPHARVSAEEGDGFDHLSIEHTLKRERQLNALTQILHSAHDIHSVMPNVLRMVAELVEADAVALPLIRRDTETLEFCYTLGVPESLLATKVPRGANLSWQIIEHQLPVLINGYHHHERALQSLVAHDVRAVIGTPVAVDEQPVGVLAVYRIGRDDPFTAHDLNILTVVGRQIGLTIDRIQRYQTAVQEAERRIALLYASQQIGATLDLPHLYRTIHQAITTLIPCESFALMLIDSGSNRLDVVYCDADAHDPAEHIVDEAVAQVLAGGQSLCVAGGGQNTRLLIVMRRGGQTLGVMSARTRASHICSATDLEMLDQLATTAAIAIENARLFEAARREADMRTRLYEASQRLGALLDLNQIYDEIYRATMSLVTCDGFLVALKSGEQAPPGVIYCVGRAYSKACANLAHRAIEKEESLRCDNTECGSSVLVAVMRRGGRVIGAILVRASQPYTYTDADRSALELLGATAAIAIDNARLFADARRHATIDELTGVWNRRSFFENARREFLRSQRTLRPLAVLMFDIDHFKSVNDTYGHAVGDQALRDLAERCRNQLRGIDIIGRYGGEEFAVALPDTDIDAAEHIAERLRTAVENTPFATAQGSISLTISIGVAVCHPDDQTTLDAIIDRADRALYLAKRSGRNSVRVWSYSAKESKG
>NC_009767.1|WP_012119295.1|973899_975126_+|MFS-transporter
MTDAQISVTLSPVQRRHGAMVMLVITFLMWGGFFMVIPLLSLRYVDDLGWSAGAVGLVLAIRQLTQQGLTVFGGALADRFGAKELIVVGMLIRAISFSAMAVATTYPFLMISAILAALGGALFDSPSSAAMVALTRPEERNRYFAVLGIVRGLGMSLGPLVGAALLRVDFAFVALAAGGCFFVASGITFLLLPPVRVAAERSELLAGILMALRDRRFMAFNVLLMGYWFMWVQLTISLPLAARALAGTSDAVSWLYALNAGMSVLLQYPVVRLAERWLRPLPVLMFGIVLMALGLGSVVFAGAIGALLVSVALFSFGALLAAPGQQTVAADLANPAALGSYFGVSALALALGGGIGNYAGGALYSLGHDINFPALPWLVCLGVGIGSAAGLAALDRRLVRRAESGVRG
>NC_009767.1|WP_041330179.1|975245_976703_+|hypothetical-protein
MSDYQSEPLVSPIRRRNWRDIVRFAPLTAHPHIALVVSRRGRVISVIPANARRVLSDYLDWPFEYREVDMRERLLELNLRLDSQDAGYAFTVVLQLVYQVVRPERVVVEHIDVLHEFAEAIIQRARAIAQKLGERGDVHTPGAAEQIIRTAVQRTLYRVAARFAPCQEREATAAMTDELWNDTVLKATLAASNLELLRPAVQIQESRRALHQSSPHLLFTDSQVAESLASEVQQADTQPKDALHNVKPSDFARESQSDASPHAQMVSMMGEDKARAAWNGNDIRSGASVSSSTVSSLSPIWEDEQNAADGADDGQADMWATSSKTVALDTDTGLLSSERPAAASLPSDGTHWRESLEPVEQSEIEQSPTRSTPCLPSNEYSRHEIVARWIELLRAQDAWVFRYVVQMIVAHPEKTAAVIGDLTTDPVLCDRATDPDCSMLLAETLRGILDMESAERGSLADAEQRAVLSEEEPDWMVLRRVFDDP

Crispr_ID: NC_009767_19

• CRISPR_ID: NC_009767_19
• CRISPR_location: 966663-966764
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_19

Consensus_repeat	Method
AACCCCTCTTGCCCCAAGCCTCGTGCCTC	CRISPRCasFinder

spacers of NC_009767_19

>19.1|966692|44|NC_009767|CRISPRCasFinder
AAGCGAAGCCGACGAAGAGTATTACTGATATTCACCTGATGTTC

CRISPR arrays and Neighbor proteins around NC_009767_19

CRISPR arrays

The CRISPR arrays of NC_009767_19

>merge|NC_009767|19|966663-966764|CRISPRCasFinder
AACCCCTCTTGCCCCAAGCCTCGTGCCTCAAGCGAAGCCGACGAAGAGTATTACTGATATTCACCTGATGTTCAACCCCTCTTGCTCCAAGCCTCGTGCCTC

>NC_009767|19|18|966663-966764|CRISPRCasFinder
AACCCCTCTTGCCCCAAGCCTCGTGCCTC	AAGCGAAGCCGACGAAGAGTATTACTGATATTCACCTGATGTTC
AACCCCTCTTGCTCCAAGCCTCGTGCCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119281.1|952987_953764_-|anti-sigma-factor	unknown	unknown	gnl|CDD|236090
NC_009767.1|WP_012119293.1|970253_971198_+|DMT-family-transporter	unknown	unknown	gnl|CDD|273359
NC_009767.1|WP_012119290.1|966062_966476_+|cytidine-deaminase	unknown	unknown	gnl|CDD|273572
NC_009767.1|WP_012119294.1|971720_973763_-|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NC_009767.1|WP_012119291.1|966820_969319_-|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|100097
NC_009767.1|WP_012119300.1|979787_980921_+|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl|CDD|238082
NC_009767.1|WP_012119283.1|954521_956960_-|two-component-sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_009767.1|WP_012119284.1|957450_958908_+|polymerase	unknown	unknown	gnl|CDD|273357
NC_009767.1|WP_012119286.1|961277_962144_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl|CDD|223268
NC_009767.1|WP_012119292.1|969579_969969_-|hypothetical-protein	unknown	unknown	gnl|CDD|130896
NC_009767.1|WP_012119285.1|959305_960385_-|low-specificity-L-threonine-aldolase	unknown	unknown	gnl|CDD|178323
NC_009767.1|WP_012119299.1|978619_979585_-|threonine/serine-dehydratase	unknown	unknown	gnl|CDD|180709
NC_009767.1|WP_083760266.1|977355_977817_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|377965
NC_009767.1|WP_012119288.1|963790_964729_+|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl|CDD|234929
NC_009767.1|WP_041330179.1|975245_976703_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119282.1|953820_954426_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|236608
NC_009767.1|WP_012119287.1|962720_963785_+|bifunctional-N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	unknown	unknown	gnl|CDD|224128
NC_009767.1|WP_012119298.1|977797_978550_-|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|224007
NC_009767.1|WP_012119289.1|964762_966070_+|HlyC/CorC-family-transporter	unknown	unknown	gnl|CDD|224173
NC_009767.1|WP_012119295.1|973899_975126_+|MFS-transporter	unknown	unknown	gnl|CDD|183255

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119281.1|952987_953764_-|anti-sigma-factor	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	4.74523e-06
NC_009767.1|WP_012119293.1|970253_971198_+|DMT-family-transporter	gnl|CDD|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	6.54907e-16
NC_009767.1|WP_012119290.1|966062_966476_+|cytidine-deaminase	gnl|CDD|273572	TIGR01354, Cytidine_deaminase, cytidine deaminase, homotetrameric. This small, homotetrameric zinc metalloprotein is found in humans and most bacteria. A related, homodimeric form with a much larger subunit is found in E. coli and in Arabidopsis. Both types may act on deoxycytidine as well as cytidine. [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides].	3.82223e-49
NC_009767.1|WP_012119294.1|971720_973763_-|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.9583e-65
NC_009767.1|WP_012119291.1|966820_969319_-|NTP-transferase-domain-containing-protein	gnl|CDD|100097	cd05805, MPG1_transferase, GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	4.30892e-177
NC_009767.1|WP_012119300.1|979787_980921_+|DNA-polymerase-III-subunit-beta	gnl|CDD|238082	cd00140, beta_clamp, Beta clamp domain. The beta subunit (processivity factor) of DNA polymerase III holoenzyme, refered to as the beta clamp, forms a ring shaped dimer that encircles dsDNA (sliding clamp) in bacteria. The beta-clamp is structurally similar to the trimeric ring formed by PCNA (found in eukaryotes and archaea) and the processivity factor (found in bacteriophages T4 and RB69). This structural correspondence further substantiates the mechanistic connection between eukaryotic and prokaryotic DNA replication that has been suggested on biochemical grounds. .	1.75541e-117
NC_009767.1|WP_012119283.1|954521_956960_-|two-component-sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.80528e-33
NC_009767.1|WP_012119284.1|957450_958908_+|polymerase	gnl|CDD|273357	TIGR00947, 2A73, putative bicarbonate transporter, IctB family. This family of proteins is suggested to transport inorganic carbon (HCO3-), based on the phenotype of a mutant of IctB in Synechococcus sp. strain PCC 7942. Bicarbonate uptake is used by many photosynthetic organisms including cyanobacteria. These organisms are able to concentrate CO2/HCO3- against a greater than ten-fold concentration gradient. Cyanobacteria may have several such carriers operating with different efficiencies. Note that homology to various O-antigen ligases, with possible implications for mutant cell envelope structure, might allow alternatives to the interpretation of IctB as a bicarbonate transport protein. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	5.87343e-15
NC_009767.1|WP_012119286.1|961277_962144_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	gnl|CDD|223268	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism].	2.94391e-126
NC_009767.1|WP_012119292.1|969579_969969_-|hypothetical-protein	gnl|CDD|130896	TIGR01837, to_the_polyhydroxyalkanoate_inclusion, poly(hydroxyalkanoate) granule-associated protein. This model describes a domain found in some proteins associated with polyhydroxyalkanoate (PHA) granules in a subset of species that have PHA inclusion granules. Included are two tandem proteins of Pseudomonas oleovorans, PhaI and PhaF, and their homologs in related species. PhaF proteins have a low-complexity C-terminal region with repeats similar to AAAKP. [Fatty acid and phospholipid metabolism, Biosynthesis].	2.77087e-14
NC_009767.1|WP_012119285.1|959305_960385_-|low-specificity-L-threonine-aldolase	gnl|CDD|178323	PLN02721, PLN02721, threonine aldolase.	4.619e-151
NC_009767.1|WP_012119299.1|978619_979585_-|threonine/serine-dehydratase	gnl|CDD|180709	PRK06815, PRK06815, threonine/serine dehydratase.	0
NC_009767.1|WP_083760266.1|977355_977817_+|SH3-domain-containing-protein	gnl|CDD|377965	pfam08239, SH3_3, Bacterial SH3 domain.	2.36386e-13
NC_009767.1|WP_012119288.1|963790_964729_+|ribose-phosphate-pyrophosphokinase	gnl|CDD|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	4.96009e-172
NC_009767.1|WP_012119282.1|953820_954426_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	3.88741e-52
NC_009767.1|WP_012119287.1|962720_963785_+|bifunctional-N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	gnl|CDD|224128	COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane].	1.27785e-129
NC_009767.1|WP_012119298.1|977797_978550_-|sugar-phosphate-isomerase/epimerase	gnl|CDD|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	2.9636e-18
NC_009767.1|WP_012119289.1|964762_966070_+|HlyC/CorC-family-transporter	gnl|CDD|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	4.49856e-118
NC_009767.1|WP_012119295.1|973899_975126_+|MFS-transporter	gnl|CDD|183255	PRK11646, PRK11646, multidrug efflux MFS transporter MdtH.	2.32263e-101

Protein sequences

>NC_009767.1|WP_012119290.1|966062_966476_+|cytidine-deaminase
MSELTPELTELLAAAAAARERAYCPYSRFAVGAAVRTASGMLFSGCNIENAAYPSAICAERVALFGAYAAGERAIVALAVIADTPEPVSPCGGCRQVIFELAPRAVVLLANLQGAWRIVSVEELLPAGFTFDRLSEP
>NC_009767.1|WP_012119289.1|964762_966070_+|HlyC/CorC-family-transporter
MDVEIGLVLAGILLCLFVLAFTSAIDAAMTAISRHRLGLLHETDARRAQVIDRLLAEPYRFKATVLLLNSTATITATALTLRLCDDQMWQWRLAALTGLLLGILIFAEALPKALAIGNPAATARALASPMALIARLLAPFIWVIGLLTRPFLRVASGQTTSSMPLVTEEELRMLVNVGEEEGLIEPEEREMIEGIFSFGDTTVREVMIPRVDIVALEETASIDEALNIIITTGHSRIPVYRETIDHIVGILYAKDLLLWLRSGQRDASIGALLRTAHFVPDTMKVDALLKDLQARKIHLAIVVDEYGGTAGLITIEDVIEEIVGEIQDEYDVDEQPIRVLAPGDMEVDARVPIDDINDLTGLRLASEESDRIGGMVFERLGRVPKVGDTVQIADGVTVVVLSMDGLRLRKLRLQYRLPQEDAISATPGEDRKNHE
>NC_009767.1|WP_012119288.1|963790_964729_+|ribose-phosphate-pyrophosphokinase
MEGRLQIFSGNANRSLAQEIASHLNINLGRAMVGTFKNGETRVKVEENVRGSDVFVVQPTCTPVNHNLMELLLLIDALRRASAARVTAVIPYYGYAKQEKKTTGREPISAKLVANLIRTAGADRVLTMDLHAPAIEGFFDIPVDHLQAGPILAEHVREMNLPRLVVVSPDAGGVGRANSFRERIGAGLAIIAKQRPQPDVAEMLDMVGDVEGKTAVIVDDMISTGGTLAEAARVLRERGALAVYACATHGIFAGDATEIIAQSALVETIVTNTIPLPEGCRKARIRAISIAPLFAEAIMRIHKDLSLSALFS
>NC_009767.1|WP_012119287.1|962720_963785_+|bifunctional-N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase
MIPFFTTVRLGVVVLAAGEGTRMRSALPKVLHPLCGRPLIGHILAAVDALQPAIGTIVLASDALDTVRARFGDTYRYVVQSERLGTGHATLQARSIMVNQCDDALVLVGDAPLIRSATLQRLVALRREQNALVALLSFTADPPTGYGRVIRDAEGNVTAIVEERDATDTQRAVTEVNSGILCFDAAWMWPALDRIQRSPVKGEYYLTDLVALAIADHGIGAVQALRADDPSETLGVNDRVQLAQAEHVLRLRLLDALMRSGVTVVDPAATYVDVDVVVGQDTTLLPGTMLRGATRVGARCTIGPHTSLIDTIVADDAHVRYTLAEGVVIPAHAVIGPFAHLRGAQHAVDEVYQA
>NC_009767.1|WP_012119286.1|961277_962144_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase
MTAMILDGRALAKTLREELRADIQAFVQTTGVTPSLAVVKIAGDPASERYTRTIRKGCEDIGIVFYDHTLPPDTTQAALEETLHALSFDRAVNGILLHLPLPPGFDSNRAIAQIDPHKDVDGVHPYNAGLLAMGQPTMVPNTPAGGMELLLRNHILIKGQRATVVGRSVVVGKPMALLLLQEHATVTIAHSRTKDLASVVREADIVVAATGKPGLITADMVRPGAVVVDFGVNVLGDGKVVGDVDFAGVAEIASAITPVPGGTGPVTNIMLLRNVLRAARLQGVGRGE
>NC_009767.1|WP_012119285.1|959305_960385_-|low-specificity-L-threonine-aldolase
MPSKPIDLRSDTVTLPTPAMRTAMARAEVGDDVYGEDPTINRLEEFAAQRVGKAAAMFVPSGTMGNLCALLAHCQRGDEVIVGDASHIYNYEAGGASVVGGVAFHVLPNQPDGTIALDHLRAAVRWLDDPHCAETRLICLENTHNSCGGVALSPEYLASVAAFARERGLLVHLDGARMFNAAIALSVDVTELTRHVDSVMFCLSKGLAAPVGSVVCGDEAFIRRARRARKVLGGSMRQAGVIAAAGIVALETMVDRLEEDHANARMLAEGLAGFPQIVIEPERVQTNIVIFTLRDGISAEEFVVRLRERGVLMGDMGGGRVRAVTHYGIDAGDITETLAVAEEVLRAGSGVRDQGFPLH
>NC_009767.1|WP_012119284.1|957450_958908_+|polymerase
MSLLSHSPRDDLAITLGRSPLIAALAAVLLGVIGGAGVAFGPFWLGFAALAALMGVYALLIDTRVGLAVVIGIATIIPFATLPFRAVVTPTLLTLALAALMGVWSLRLLVRRDERLIVTPIGLAIIGFLGITLFAFLLGSNASPEPSLIHNYVKFVMATLFFFSVVNCVRDRETVRWVIRFLIIGAALSALIALVLYVIPDQLALQILVSFGRIGYPTEGRVLRYVEDDPNGLMRAIGLSVDPNSFGGMLALIGALAATQAVSERPALPRRLLLIATGAILLALFLTYSRAALGGMIVAAMYVATLRYRRLWWVILAVGALAAALFIGLGVGERFVERVVEGVQFRDRANQMRLAEYQNAIAIIQAYPVFGIGFGQAPEIDLVAGVSSIYLAIAQRTGLVGLTAFLSIIAWFFARNWSVLRAAARSGDEERAAWLVALQAALAAALAVGLLDHYFFNIEFSHMSALLWGTVGLAVAIEGLEEETD
>NC_009767.1|WP_012119283.1|954521_956960_-|two-component-sensor-histidine-kinase
MDTKRHPFPWQASVLLIFAGAPLIAGTISFISALNLLGQPSIGILPLWQGAIRCNAVSPITPPSWPGMASGALQTGDCIEMINDVSALTWPYRELERYADSHNQSNLVDLIIRRGGEPLIVRVPVLRLTWLHVLQLQAGIIPIILVVWTLALVVLLAQPHTEANRVFAALFLVLALAIAGLFHGLNDAEGRYYTAFTIVSSMAWIGPLLHHLALLTPRPLPRFAFLRFALHPIGLAAMTLHLDSMLEFVPLLQPWRGSAPGVASAINGVTMLIGLAAFLGRVGFWAWRGDRSIADQMWVLLMSWGLGAGPLTLASAYYLLTYRAPLWTSLQPFLFCLLILCTGTAYAMLRYQSFAYRGRVLNVLAMIYLSAAIACVVMVIVLIGIFRTPVDGLLFMALWSATFATTLFWHTDSPFRRLYRRFFLRHQHHYQATLDFATRMNQTSDLDALVQQGATLIRQAVMSDWVAVRHALASDRIWLATATIIEIRQANPPHADTTCLPETPAVICQLASEGELLGTLYVGARHVPEPLDEEDERLIGLLATMLAHAMHIRAQIQRLSEVPALMIAAQEQERERIAQEIHDGVLPVLGALPFGLTQIEQSVQTGAPADTIISICEAYRERAVRTTRELRSILRHLQPPIVGGTHLGLSIQAFTQEICNLYQVQATIHGATVVYPLDEFTSRHAYRIIQQAIVNALQHARPDRLDVSIEAEQHGWTCRVSDNGHGFDPQQSSQTNGFGIFSMRERARIIGATLTIESQPGQGTTVTLRVKGKKREGRKESGALNIEGGQSTPLRYSSEALRVENESTRIAS
>NC_009767.1|WP_012119282.1|953820_954426_-|sigma-70-family-RNA-polymerase-sigma-factor
MANEELRLVAAAQRGDVESFNALVRLYEGRVYNLCYRLLGDADSAADATQDAFLSAYRHLDAFRGGSFRSWVFRIATNVCYDALRARQRRPVVSLDAAGETSAEEPSSFQIADTSETPDEFALRRELARAIEAGLTQLPVDQRLVVVLCDLQGLTYEEIAEVTGANLGTIKSRLSRGRARLRDVLRQEELLPLRFRHEGEE
>NC_009767.1|WP_012119281.1|952987_953764_-|anti-sigma-factor
MTTQPQLSEHDLEILSAYIDGQVSADERRALERRLQEDAALRLAYEEMRATVQALRDLEPLRPPRSFTLDPARIAAQRPPAARLGWGRLLQVAGVFAGVLIVAIGVLNVLGSMRAGAPSMAVQPTAPAAAPFAVAPTEPPTTAAEVRESIPGSTVTAPIPHGGAAAPAALDNGAEAGTPQALTTIRATPELAMQPEVAPQPTIAPPAISSPGTVDLAQPTPLAEPSTPAGAPDPTLLLVVAVIVVLAGGVWLWRRSRG
>NC_009767.1|WP_012119291.1|966820_969319_-|NTP-transferase-domain-containing-protein
MKAVVMAGGEGSRLRPLTINRPKPMVPIVDRHVMAHIIELLKRHGITDIVVTVQYLANVIQDHFGDGSAYGVHIEYSLEEQPLGTAGSVKNAERFLREPFLVISGDALTDFDLTKIIEFHQSHGATATITLTRVPNPLDYGVVVVDERGYVRQFLEKPSWGEVFSDTVNTGIYVVTPEIFRYIEKGAFTDWSKDVFPRMLRSGNLPVGYVAEGYWTDIGTIEEYMRASRDYMQGKVNLPRVGERIFDEVWVEGDVEIAPDAQFHGPVFLGHGVKIKSGAIIHGPSAIRDYTIIDTRATIDRSIIWRNSYIGERAELRGAIVMRQCNIKSRAVLFEGTVVGDQTIINAGAVIGANVKIWPSKEVEEGATISSSIIWGSQGRRVLFGRSGISGLVNIDLTPEFGARLGAAFGATLPRGAVVTTSRDTHYTPRMIKRGLVAGLPSAGVHVAELHDVPLPVARVITRAINAAGGVHVRLSPLDSRVVDIKFFDADGLDIDTATERKIEGVFFREDYRRVYLDEIGRINEVEHINQIYTDMFLGALRPDALASIARNFQVVIDYANANTSNFLPAILRRLHIEAVELNANLDAQLLFQTPQQFEAGMERLARITPVLEASLGARLDAGGEKIFLVDDTGKRLPGMQALAAITALALAVNGGGTVAVPVTAPRAFEMIAAKYGGRIVRTRATLGALMRTAAASRDMLLLGDGAGSVIFPSFYPIADGMFAIVKIVELLALQQVRLSEIVRDLPHYFMSQARVPCRWEFKGKVMRILNQQYQDRKLDQVDGVKIDLGDEWVLILPDPDGPFFHVIAEGSSDEQARVLAEKYAGLVTGLQ
>NC_009767.1|WP_012119292.1|969579_969969_-|hypothetical-protein
MTEEVEVKVTEVEESAPGANKWIIDGMRRLLLASFGAVAMTFDEVEAFVKKLVERGELAQKDAEKLLHEMQNRLTANRPQVEKVSDRVEQGMEEFLNRLNIPSKRDIDELSQKIAQLAARVEELRKSQE
>NC_009767.1|WP_012119293.1|970253_971198_+|DMT-family-transporter
MQPHARTGYALSALAAVVWASTAPGLSYLITRYAIPGLTLALWRDLLIAVVCAGGLLAFRPALLRIGTRAIVQLALTGMISIGMYHALWLWSVTLNGAAIAVVLIYTYPVFVALGAWLLFREQITKAHIVALALALAGCALVVRAYDPAILRISWTGAVIGLLTALTHTVYVLIGQRNAPSISPWTTLAYTMIFGALTLVALALAADYLAPSTRSYLWSIEAPSAWVILAMIAVGPTLGGYALFTQSLRYIPGKVAGLISVIEAPVAALIAVTLLGERLELLQVVGIVLILVAVVLPRFAARVQQTATLVASRG
>NC_009767.1|WP_012119294.1|971720_973763_-|diguanylate-cyclase
MTQAGHSETRPHADAFLHARAVNHSPHARVSAEEGDGFDHLSIEHTLKRERQLNALTQILHSAHDIHSVMPNVLRMVAELVEADAVALPLIRRDTETLEFCYTLGVPESLLATKVPRGANLSWQIIEHQLPVLINGYHHHERALQSLVAHDVRAVIGTPVAVDEQPVGVLAVYRIGRDDPFTAHDLNILTVVGRQIGLTIDRIQRYQTAVQEAERRIALLYASQQIGATLDLPHLYRTIHQAITTLIPCESFALMLIDSGSNRLDVVYCDADAHDPAEHIVDEAVAQVLAGGQSLCVAGGGQNTRLLIVMRRGGQTLGVMSARTRASHICSATDLEMLDQLATTAAIAIENARLFEAARREADMRTRLYEASQRLGALLDLNQIYDEIYRATMSLVTCDGFLVALKSGEQAPPGVIYCVGRAYSKACANLAHRAIEKEESLRCDNTECGSSVLVAVMRRGGRVIGAILVRASQPYTYTDADRSALELLGATAAIAIDNARLFADARRHATIDELTGVWNRRSFFENARREFLRSQRTLRPLAVLMFDIDHFKSVNDTYGHAVGDQALRDLAERCRNQLRGIDIIGRYGGEEFAVALPDTDIDAAEHIAERLRTAVENTPFATAQGSISLTISIGVAVCHPDDQTTLDAIIDRADRALYLAKRSGRNSVRVWSYSAKESKG
>NC_009767.1|WP_012119295.1|973899_975126_+|MFS-transporter
MTDAQISVTLSPVQRRHGAMVMLVITFLMWGGFFMVIPLLSLRYVDDLGWSAGAVGLVLAIRQLTQQGLTVFGGALADRFGAKELIVVGMLIRAISFSAMAVATTYPFLMISAILAALGGALFDSPSSAAMVALTRPEERNRYFAVLGIVRGLGMSLGPLVGAALLRVDFAFVALAAGGCFFVASGITFLLLPPVRVAAERSELLAGILMALRDRRFMAFNVLLMGYWFMWVQLTISLPLAARALAGTSDAVSWLYALNAGMSVLLQYPVVRLAERWLRPLPVLMFGIVLMALGLGSVVFAGAIGALLVSVALFSFGALLAAPGQQTVAADLANPAALGSYFGVSALALALGGGIGNYAGGALYSLGHDINFPALPWLVCLGVGIGSAAGLAALDRRLVRRAESGVRG
>NC_009767.1|WP_041330179.1|975245_976703_+|hypothetical-protein
MSDYQSEPLVSPIRRRNWRDIVRFAPLTAHPHIALVVSRRGRVISVIPANARRVLSDYLDWPFEYREVDMRERLLELNLRLDSQDAGYAFTVVLQLVYQVVRPERVVVEHIDVLHEFAEAIIQRARAIAQKLGERGDVHTPGAAEQIIRTAVQRTLYRVAARFAPCQEREATAAMTDELWNDTVLKATLAASNLELLRPAVQIQESRRALHQSSPHLLFTDSQVAESLASEVQQADTQPKDALHNVKPSDFARESQSDASPHAQMVSMMGEDKARAAWNGNDIRSGASVSSSTVSSLSPIWEDEQNAADGADDGQADMWATSSKTVALDTDTGLLSSERPAAASLPSDGTHWRESLEPVEQSEIEQSPTRSTPCLPSNEYSRHEIVARWIELLRAQDAWVFRYVVQMIVAHPEKTAAVIGDLTTDPVLCDRATDPDCSMLLAETLRGILDMESAERGSLADAEQRAVLSEEEPDWMVLRRVFDDP
>NC_009767.1|WP_083760266.1|977355_977817_+|SH3-domain-containing-protein
MGARRRAARAETIYPALSSGCDDCCCVAVGGWCRWRLVSGCRAADNLGTQAHTNVPAPFGADAPAPSPEPAASPPVTPPSAPPMLQVVAERLNLRAGPGTDYPVLTTLSRGDKVEYLGKTAGSGADVWIRVRRGTQEGWVFRAFLQEPTSPSP
>NC_009767.1|WP_012119298.1|977797_978550_-|sugar-phosphate-isomerase/epimerase
MTRIPIALQLYSVRDDAARDLQGVLAAVADMGYEGVEFAGYYGHDARTIRDWLDAYGLKVAGAHVGIETLLGDELARTIEFHQTLGNTTLIVPGLAEQWRNSRAAWLTTAETLNAIAVALKPYGMRTGYHNHHIEFAPMEGELPWDTLFSNTTDDVIMQFDTGNALHGGAQAAPFLRRYPGRAKTVHLKEYSATNDSALIGEGDVPWNEIFELCETIGGTEWYIVEQESYAYPPLECVRRCLQALKAMGK
>NC_009767.1|WP_012119299.1|978619_979585_-|threonine/serine-dehydratase
MNDMLHEILRAARRLRRALRPTPLEESIRLGALTDGRALLKLENTQPTGSFKVRGALNVLLSLPSHVRERGVVAASSGNHGAAVAYSALRLGAPALIFVPEDTSPVKVNAMRDFGADVRVYGDDCVVTETYARSYATDHGLTYISPYNDPLVIGGQGTIGVELARQIDRLDAILVAVGGGGLISGIAAYMKAVQPDVRIIGCSPIHSPAMYESVLAGEVVSPPVLPTLSDGTAGGVEPGAITLDLCRALVDEWVLVSEGEIAAAMRLMIETQHTLVEGSAGVAVAGYLRLKEEMRGKTAAIIICGGNVSLATLRTVIDMHI
>NC_009767.1|WP_012119300.1|979787_980921_+|DNA-polymerase-III-subunit-beta
MKLSCLQENLKRGLAVVSHAVAGKSTLPVLSNILIASDDGRLKLAATNLEIGITCWIGAKIEEEGAVAVPAKLLSDVVGSLPNDRIDLTLDGRTQTLNLKCARFESNIKGTESGEFPAIPTVDNRTPTAVFPPTLLRETIQQVAFAASTEETRPVLQGVQLRLRDNRAIFAAADGFRLAQRIVELPEPVAQPQDLIIPARALNELARILNDDESQVEMIVTHSGGQVLFHTSTVDLVSRLIDGKYPDVDRVIPQQYQTRAVLDTQELTKAVKLASYFTVAPSNSVRLHMEPGGDLGPGRMTISANAVDVGDNKGQVDAMIEGEGGQIALNVKFLSDAIAAIPTPQLALETQSPQHPAVFKPVGADGYIHIVMPMTVR

Crispr_ID: NC_009767_20

• CRISPR_ID: NC_009767_20
• CRISPR_location: 984797-985092
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_009767_20

Consensus_repeat	Method
AGCCCGCCCGCCGCTTCTCGTGGTTCGACAAGTC	PILER-CR

spacers of NC_009767_20

>20.1|984831|56|NC_009767|PILER-CR
CAAACCGGCTCACAGCGCCGTTGCCGACGACTCTGCCACCGTGGCGGCAGCGCCAC
>20.2|984921|50|NC_009767|PILER-CR
TGCTGCGCCTACCACTCCCGACGAAGCCGCAGGCGGCGCGCATGGTGCGA
>20.3|985005|56|NC_009767|PILER-CR
CAAACCGGCTCACAGCGCCGTTGCCGACGACTCTGCCACCGTGGCGGCAGCGCCAC

CRISPR arrays and Neighbor proteins around NC_009767_20

CRISPR arrays

The CRISPR arrays of NC_009767_20

>merge|NC_009767|20|984797-985092|PILER-CR
CCCGCTCGTCGTTTCTCGTGGTTCGGCAAGTCCAAACCGGCTCACAGCGCCGTTGCCGACGACTCTGCCACCGTGGCGGCAGCGCCACAGCCTGCCCGCCGCTTTTCGTGGTTCGACAGGTCTGCTGCGCCTACCACTCCCGACGAAGCCGCAGGCGGCGCGCATGGTGCGAAGCCCGCTCGTCGTTTCTCGTGGTTCGGCAAGTCCAAACCGGCTCACAGCGCCGTTGCCGACGACTCTGCCACCGTGGCGGCAGCGCCACAGCCTGCCCGCCGCTTTTCGTGGTTCGACAGGTC

>NC_009767|20|2|984797-985092|PILER-CR
CCCGCTCGTCGTTTCTCGTGGTTCGGCAAGTCCA	AACCGGCTCACAGCGCCGTTGCCGACGACTCTGCCACCGTGGCGGCAGCGCCACAG
CCTGCCCGCCGCTTTTCGTGGTTCGACAGGTCTG	CTGCGCCTACCACTCCCGACGAAGCCGCAGGCGGCGCGCATGGTGCGAAG
CCCGCTCGTCGTTTCTCGTGGTTCGGCAAGTCCA	AACCGGCTCACAGCGCCGTTGCCGACGACTCTGCCACCGTGGCGGCAGCGCCACAG
CCTGCCCGCCGCTTTTCGTGGTTCGACAGGTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119302.1|981310_982459_+|DUF2029-domain-containing-protein	unknown	unknown	gnl|CDD|378217
NC_009767.1|WP_012119295.1|973899_975126_+|MFS-transporter	unknown	unknown	gnl|CDD|183255
NC_009767.1|WP_083760268.1|992136_993537_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012119312.1|995595_996834_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119294.1|971720_973763_-|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NC_009767.1|WP_012119305.1|988284_989406_-|DUF2029-domain-containing-protein	unknown	unknown	gnl|CDD|378217
NC_009767.1|WP_012119300.1|979787_980921_+|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl|CDD|238082
NC_009767.1|WP_012119310.1|993239_994319_-|DUF2029-domain-containing-protein	unknown	unknown	gnl|CDD|378217
NC_009767.1|WP_012119301.1|980927_981272_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119311.1|994315_995347_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133030
NC_009767.1|WP_012119299.1|978619_979585_-|threonine/serine-dehydratase	unknown	unknown	gnl|CDD|180709
NC_009767.1|WP_083760266.1|977355_977817_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|377965
NC_009767.1|WP_012119307.1|990366_991071_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009767.1|WP_041330179.1|975245_976703_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_083760267.1|989392_990544_-|flippase-like-domain-containing-protein	unknown	unknown	gnl|CDD|377103
NC_009767.1|WP_012119293.1|970253_971198_+|DMT-family-transporter	unknown	unknown	gnl|CDD|273359
NC_009767.1|WP_012119298.1|977797_978550_-|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|224007
NC_009767.1|WP_012119313.1|997619_998033_-|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|366864
NC_009767.1|WP_012119304.1|986315_988295_-|DUF2079-domain-containing-protein	unknown	unknown	gnl|CDD|370724
NC_009767.1|WP_012119308.1|991073_992150_-|glycosyltransferase	unknown	unknown	gnl|CDD|133029

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119302.1|981310_982459_+|DUF2029-domain-containing-protein	gnl|CDD|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	1.69774e-13
NC_009767.1|WP_083760267.1|989392_990544_-|flippase-like-domain-containing-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	4.13076e-33
NC_009767.1|WP_083760268.1|992136_993537_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.8732e-70
NC_009767.1|WP_012119294.1|971720_973763_-|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.9583e-65
NC_009767.1|WP_012119300.1|979787_980921_+|DNA-polymerase-III-subunit-beta	gnl|CDD|238082	cd00140, beta_clamp, Beta clamp domain. The beta subunit (processivity factor) of DNA polymerase III holoenzyme, refered to as the beta clamp, forms a ring shaped dimer that encircles dsDNA (sliding clamp) in bacteria. The beta-clamp is structurally similar to the trimeric ring formed by PCNA (found in eukaryotes and archaea) and the processivity factor (found in bacteriophages T4 and RB69). This structural correspondence further substantiates the mechanistic connection between eukaryotic and prokaryotic DNA replication that has been suggested on biochemical grounds. .	1.75541e-117
NC_009767.1|WP_012119305.1|988284_989406_-|DUF2029-domain-containing-protein	gnl|CDD|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	2.81019e-16
NC_009767.1|WP_012119310.1|993239_994319_-|DUF2029-domain-containing-protein	gnl|CDD|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	0.00158103
NC_009767.1|WP_012119298.1|977797_978550_-|sugar-phosphate-isomerase/epimerase	gnl|CDD|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	2.9636e-18
NC_009767.1|WP_012119311.1|994315_995347_-|glycosyltransferase-family-2-protein	gnl|CDD|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.73393e-88
NC_009767.1|WP_012119299.1|978619_979585_-|threonine/serine-dehydratase	gnl|CDD|180709	PRK06815, PRK06815, threonine/serine dehydratase.	0
NC_009767.1|WP_083760266.1|977355_977817_+|SH3-domain-containing-protein	gnl|CDD|377965	pfam08239, SH3_3, Bacterial SH3 domain.	2.36386e-13
NC_009767.1|WP_012119307.1|990366_991071_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.54024e-15
NC_009767.1|WP_012119295.1|973899_975126_+|MFS-transporter	gnl|CDD|183255	PRK11646, PRK11646, multidrug efflux MFS transporter MdtH.	2.32263e-101
NC_009767.1|WP_012119293.1|970253_971198_+|DMT-family-transporter	gnl|CDD|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	6.54907e-16
NC_009767.1|WP_012119313.1|997619_998033_-|DUF86-domain-containing-protein	gnl|CDD|366864	pfam01934, DUF86, Protein of unknown function DUF86. The function of members of this family is unknown.	2.64767e-30
NC_009767.1|WP_012119304.1|986315_988295_-|DUF2079-domain-containing-protein	gnl|CDD|370724	pfam09852, DUF2079, Predicted membrane protein (DUF2079). This domain, found in various hypothetical prokaryotic proteins, has no known function.	2.95052e-76
NC_009767.1|WP_012119308.1|991073_992150_-|glycosyltransferase	gnl|CDD|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.51211e-50

Protein sequences

>NC_009767.1|WP_012119302.1|981310_982459_+|DUF2029-domain-containing-protein
MKRNREVGGRLPYSEPLLHTLLRLLIGGGVLLCGLLLAQRLPNPDLFGDYVAACAWWQRLPEHLWLAGLSRCDANVDYNAFGPGAHPPFSTVFFLPLGFLAWTDARLAWLIISGACLIGVWHYYRVPVSVCAATALFGVFGLYRGTMEPFLFALMMVALSQEEERPLFSAALIGLAAAIKVYPVLMLAALVIARRLNALIAGIVTGGLATAAGDLVLGIGKTGAWMGHMTPNALAWRINPDNLSLVRIAGDFVPQLSPLVVAVALFGAAVALLINAPHGQVRMHTLVPTTLLVTPLVWSHYIVHTGLLQLTRLEQVLLFAGSGLIFLGILGIFPFQSAAIAYGPVLAALVLIWHRAWRSGTELSVRKKLSGAAPSESSIPNC
>NC_009767.1|WP_012119301.1|980927_981272_+|hypothetical-protein
MDLLHKYWRWLALIVLIIVLTNSRSLPWPLVTLILGVAAGYLLREGWIVWRRAGGPPTRSKVTYWRGQRIEVGPPRAGPALPDIRGIGPALIYLIPGLIFALVAVAVVLRNLGL
>NC_009767.1|WP_012119300.1|979787_980921_+|DNA-polymerase-III-subunit-beta
MKLSCLQENLKRGLAVVSHAVAGKSTLPVLSNILIASDDGRLKLAATNLEIGITCWIGAKIEEEGAVAVPAKLLSDVVGSLPNDRIDLTLDGRTQTLNLKCARFESNIKGTESGEFPAIPTVDNRTPTAVFPPTLLRETIQQVAFAASTEETRPVLQGVQLRLRDNRAIFAAADGFRLAQRIVELPEPVAQPQDLIIPARALNELARILNDDESQVEMIVTHSGGQVLFHTSTVDLVSRLIDGKYPDVDRVIPQQYQTRAVLDTQELTKAVKLASYFTVAPSNSVRLHMEPGGDLGPGRMTISANAVDVGDNKGQVDAMIEGEGGQIALNVKFLSDAIAAIPTPQLALETQSPQHPAVFKPVGADGYIHIVMPMTVR
>NC_009767.1|WP_012119299.1|978619_979585_-|threonine/serine-dehydratase
MNDMLHEILRAARRLRRALRPTPLEESIRLGALTDGRALLKLENTQPTGSFKVRGALNVLLSLPSHVRERGVVAASSGNHGAAVAYSALRLGAPALIFVPEDTSPVKVNAMRDFGADVRVYGDDCVVTETYARSYATDHGLTYISPYNDPLVIGGQGTIGVELARQIDRLDAILVAVGGGGLISGIAAYMKAVQPDVRIIGCSPIHSPAMYESVLAGEVVSPPVLPTLSDGTAGGVEPGAITLDLCRALVDEWVLVSEGEIAAAMRLMIETQHTLVEGSAGVAVAGYLRLKEEMRGKTAAIIICGGNVSLATLRTVIDMHI
>NC_009767.1|WP_012119298.1|977797_978550_-|sugar-phosphate-isomerase/epimerase
MTRIPIALQLYSVRDDAARDLQGVLAAVADMGYEGVEFAGYYGHDARTIRDWLDAYGLKVAGAHVGIETLLGDELARTIEFHQTLGNTTLIVPGLAEQWRNSRAAWLTTAETLNAIAVALKPYGMRTGYHNHHIEFAPMEGELPWDTLFSNTTDDVIMQFDTGNALHGGAQAAPFLRRYPGRAKTVHLKEYSATNDSALIGEGDVPWNEIFELCETIGGTEWYIVEQESYAYPPLECVRRCLQALKAMGK
>NC_009767.1|WP_083760266.1|977355_977817_+|SH3-domain-containing-protein
MGARRRAARAETIYPALSSGCDDCCCVAVGGWCRWRLVSGCRAADNLGTQAHTNVPAPFGADAPAPSPEPAASPPVTPPSAPPMLQVVAERLNLRAGPGTDYPVLTTLSRGDKVEYLGKTAGSGADVWIRVRRGTQEGWVFRAFLQEPTSPSP
>NC_009767.1|WP_041330179.1|975245_976703_+|hypothetical-protein
MSDYQSEPLVSPIRRRNWRDIVRFAPLTAHPHIALVVSRRGRVISVIPANARRVLSDYLDWPFEYREVDMRERLLELNLRLDSQDAGYAFTVVLQLVYQVVRPERVVVEHIDVLHEFAEAIIQRARAIAQKLGERGDVHTPGAAEQIIRTAVQRTLYRVAARFAPCQEREATAAMTDELWNDTVLKATLAASNLELLRPAVQIQESRRALHQSSPHLLFTDSQVAESLASEVQQADTQPKDALHNVKPSDFARESQSDASPHAQMVSMMGEDKARAAWNGNDIRSGASVSSSTVSSLSPIWEDEQNAADGADDGQADMWATSSKTVALDTDTGLLSSERPAAASLPSDGTHWRESLEPVEQSEIEQSPTRSTPCLPSNEYSRHEIVARWIELLRAQDAWVFRYVVQMIVAHPEKTAAVIGDLTTDPVLCDRATDPDCSMLLAETLRGILDMESAERGSLADAEQRAVLSEEEPDWMVLRRVFDDP
>NC_009767.1|WP_012119295.1|973899_975126_+|MFS-transporter
MTDAQISVTLSPVQRRHGAMVMLVITFLMWGGFFMVIPLLSLRYVDDLGWSAGAVGLVLAIRQLTQQGLTVFGGALADRFGAKELIVVGMLIRAISFSAMAVATTYPFLMISAILAALGGALFDSPSSAAMVALTRPEERNRYFAVLGIVRGLGMSLGPLVGAALLRVDFAFVALAAGGCFFVASGITFLLLPPVRVAAERSELLAGILMALRDRRFMAFNVLLMGYWFMWVQLTISLPLAARALAGTSDAVSWLYALNAGMSVLLQYPVVRLAERWLRPLPVLMFGIVLMALGLGSVVFAGAIGALLVSVALFSFGALLAAPGQQTVAADLANPAALGSYFGVSALALALGGGIGNYAGGALYSLGHDINFPALPWLVCLGVGIGSAAGLAALDRRLVRRAESGVRG
>NC_009767.1|WP_012119294.1|971720_973763_-|diguanylate-cyclase
MTQAGHSETRPHADAFLHARAVNHSPHARVSAEEGDGFDHLSIEHTLKRERQLNALTQILHSAHDIHSVMPNVLRMVAELVEADAVALPLIRRDTETLEFCYTLGVPESLLATKVPRGANLSWQIIEHQLPVLINGYHHHERALQSLVAHDVRAVIGTPVAVDEQPVGVLAVYRIGRDDPFTAHDLNILTVVGRQIGLTIDRIQRYQTAVQEAERRIALLYASQQIGATLDLPHLYRTIHQAITTLIPCESFALMLIDSGSNRLDVVYCDADAHDPAEHIVDEAVAQVLAGGQSLCVAGGGQNTRLLIVMRRGGQTLGVMSARTRASHICSATDLEMLDQLATTAAIAIENARLFEAARREADMRTRLYEASQRLGALLDLNQIYDEIYRATMSLVTCDGFLVALKSGEQAPPGVIYCVGRAYSKACANLAHRAIEKEESLRCDNTECGSSVLVAVMRRGGRVIGAILVRASQPYTYTDADRSALELLGATAAIAIDNARLFADARRHATIDELTGVWNRRSFFENARREFLRSQRTLRPLAVLMFDIDHFKSVNDTYGHAVGDQALRDLAERCRNQLRGIDIIGRYGGEEFAVALPDTDIDAAEHIAERLRTAVENTPFATAQGSISLTISIGVAVCHPDDQTTLDAIIDRADRALYLAKRSGRNSVRVWSYSAKESKG
>NC_009767.1|WP_012119293.1|970253_971198_+|DMT-family-transporter
MQPHARTGYALSALAAVVWASTAPGLSYLITRYAIPGLTLALWRDLLIAVVCAGGLLAFRPALLRIGTRAIVQLALTGMISIGMYHALWLWSVTLNGAAIAVVLIYTYPVFVALGAWLLFREQITKAHIVALALALAGCALVVRAYDPAILRISWTGAVIGLLTALTHTVYVLIGQRNAPSISPWTTLAYTMIFGALTLVALALAADYLAPSTRSYLWSIEAPSAWVILAMIAVGPTLGGYALFTQSLRYIPGKVAGLISVIEAPVAALIAVTLLGERLELLQVVGIVLILVAVVLPRFAARVQQTATLVASRG
>NC_009767.1|WP_012119304.1|986315_988295_-|DUF2079-domain-containing-protein
MSAEPHPSLRDPFLWIALLLIGGMLGWLSVARYEGFNAGMYDLGNMAQSIWSATRGEPLLYSRPEGSRASRLAGHVEVGYFLFAPFYALWPDPRMLLVAQAALFALGAIPVYRLAWRRLDAPYSGERAMPYAARCLTLIYLLYPTAQTSVLFDFHADTVAAPLILLALDALDVRSWRRFALWTALALSMKFYVAALVVGIGVVVWLWEEQRRAGMLTTLAGGVYGALAFFVIRPLFATQSAGGAAEITGNYLAYYFGAIHEIAATLPDRLLNAVVVFGPALLVAWRGWRWLLPGLPLAGAMLISTGPGGAFDYRYHHYALVAPFLVMATIDGAARMQRTTPSLPGEPRHRGRSWRGDLGFTVAVTAIFSALLVNTPLNPLFWIGAPGYGFDRSVYGVTPRDARLAAFLTTRVPPDAPLAASTFVATHLVNRETVYLVRYPFEARPEHLPDLLPQVQYALPDALFDWYLQLDDGYGGGLDYDREAIAILLRDPSFALVDMEDGLLLFERDADSGHALVNRVSVVDDNGASVLQQFGPFDLVRANIEVIGERRLRASFAWRVRAALPPGVKFVAVSRLDGAPGARFVHLPGYALHPVWEWSAGDVIEETFDVLVPPDTPPGRYAWRVGWYDVRHPDATLTDERSRMAGTAEYVVTFIEVTP
>NC_009767.1|WP_012119305.1|988284_989406_-|DUF2029-domain-containing-protein
MPKPNDHRAARRLMIMTATGFLVATLIVISRESGADFAQDYAAAWAWWHGMDPGTPTFLIFEACCPEDNVTGAYQTAHPPFATMIVLPFGLLPFKTARAIWLLIGSFSIVIAWRYAQVDHKMALATASMWVIGLSLGSLEPIVLLALAIALRMRSSRANVSAVLIGVTAAIKIYPGILLLALLIARRWKEGASGVLAALIATLVADRLVGGDALADWIAYIPWNIERYIASAGNASAVRLVSLVFPDIPTSLLSLGMILALLAPIAPYLYRYRSGDWRTLLPVMILGSPLVGPHYIACVGLAYSNRVAAYFLGIGGGISLLARIGLFPLSYETEAFIVAPMLAGLFILWLEAIRRMIVQHYPIARKKSTSDVR
>NC_009767.1|WP_083760267.1|989392_990544_-|flippase-like-domain-containing-protein
MQPLWSAHRHSGMVCRANIRWTRHGHDRPDSAGNSWRETLQTTADFRGGNPDDRSSSRMKHWSHWIRVGLGIALIVLLVVQFANTRSVWQTIIAAHPFPLAGSIVIYFVGVMLSCLKWHLLLRAQGIRASFARLVEWYLMGALAGTLLPSDIGGDLGRGYAAARALGNRAGVWTSVVMERLTGLLALVAMASLTLAFLPDVLDAPAWAPIGAGLGMALTTVGFAALSGFLPLRLARVPHWMERIIAQLQDVITPYRNNLGTIVACLGLSVMFHTNNALSFWLLAISVKSDAPVATMILWPLAGVFGLLPLTPGGLGVREGVTAALLMRVGLTPDQAVAAAMIARMLLLLCSLTGLPTLVAIISSIDKRASTTGKKEMPDDAQA
>NC_009767.1|WP_012119307.1|990366_991071_-|class-I-SAM-dependent-methyltransferase
MPFYDYYGERAATAAGIGWVRAQARYVLDRLMQASPSAASLLEIGPGRGVFADACRQHHVRYCALDINIRLLRGLADRSHNGMQARATQIPCADEMFDITFASHVIEHSPAYNDALAFLEEMRRVAKRGGLVAIVAPDYLALREDFWNCDYSHSFVTTRRRLRQMYHDTGLTILDECNLYGPLTGIVGWCAGQTFGGHVMGMIARTVPGIVGEKLYKLRLTFAGAILMIGRVAG
>NC_009767.1|WP_012119308.1|991073_992150_-|glycosyltransferase
METFDPGVTIVLITYNSAAYVRECLQSVRCAAPEVHVLIVDNASTDNTVEIVRRDFPECTLVPLPQNIGHSAACNLALQRAKTAWVLFLDHDTTTPVGWLEPLLAIAAATWPDVGMVGSRAVLVEQGRIHHDGGYAHYVGHMTLRNGFAPLADVACDTTPVEVGAQASTSLLVHRERALAVGGFDPRFFIYLNDFDLSLRMRLRGWRCYVAPESVVYHRQGNPETSWRGSGDYPERRAYLIYRNRWMLIARMYALRTLMVCLPALVVYEMALAAIALRKGWRRAYWRAFRDVVRLWPALRFHRSRIQSSRRISDRELLSAYGFSYVPGLLRHPAEQAIQQVFERAFAAYWRLVQPLLE
>NC_009767.1|WP_083760268.1|992136_993537_-|glycosyltransferase-family-4-protein
MASSQCQARARRNCHGRAVAVADTQFLQPCCAPAADCAAAAKSGCAGCAAELGCAGVTDSQYRHRVYSRIRALPAAINRAGSDNMADARAGGWPVVRILTLNYEYPPLGGGASPVTRALCEHLAAVGHEVDVVTMGYQHLPQFEISGRVRVIRVPALRRSMVRAETPELLSYIASALLPTLALTQRRRYNVVHAHFIVPTGILAAAVRRVSGLPLVITAHGSDVPGYNPDRFTRGHRLIAPVWRVVAHSADVIVSPSHYLRALIQRTCERPVEVIPYGFDPPPVRISKRKRRILFVSRLFPRKGAHYLLEALAGLPLDGWEITIAGDGPMLEALQAQAQHLGLSVDWRGFIKGAPLDELYASSAIFVFPSTNDNFPVVLLEALAGGCAVITTNISGMPEVVGDAGILVPPQDVPALRDAIRRLMNDDDLRADLSARARARIAHFAWDNVIRRYLEVYQGAGVYGNV
>NC_009767.1|WP_012119310.1|993239_994319_-|DUF2029-domain-containing-protein
MRPGGTQAGFVLARWQPWTVIVAGAVLIAVIHHAYATAYTSPDLQVWWMAARLWLEGIDPYGPIGDHMLGTGSGFAYPFPAVLLCLPLTPLPLAWASTVWALMSLAVVGALPFALRDHPVPWMPTVMLAYFPLWASLEEGQWGTMLLMWTALSLYWLRTERWLPSGVVASLALLKPNVGIALLAGIVAYALCVHAPRRWWNGLGIGLLIFWAGTQALAPGWPIAWLEQLRAYDAEDQNRIDAVSMTGALAGMMVMICTFIAWRRRNVRLVLAGIVTVVLLLLPTRSFYNHVVLLLPIALLPPRVAAPVALLSWGVLALPTLSTDIVFTRAFALYLPLSIGLAATIWQTHEQEAGPLCAS
>NC_009767.1|WP_012119311.1|994315_995347_-|glycosyltransferase-family-2-protein
MGITTTHKPHTETVHQWDGASAPYLSVVVPVYNEEETIPHLYRRLTTELEHLGLPYEIIAVDDGSSDRSFALLRDLARADRRLRVVRFRRNFGQTAAFSAGFDRAQGEVVVTIDADLQNDPADIGALLAKIEEGYDVVSGWRAHRQDPFLNRRLPSIIANRLISWATGVRLHDYGCSLKAYRLEVVRGIRLYGELHRFIPAIASWQGVTVTELPVRHAPRRFGRSKYGISRTLRVLLDLVTVRFLLSYGTRPMHIFGLLGLLAGGLGMLIGAYLTWIKLAYGAAISDRPLLLLAVLLIVLGVQFMSLGLIGELVVRTYYEAQAKPIYVVREEVDGETWRGSQQ
>NC_009767.1|WP_012119312.1|995595_996834_-|hypothetical-protein
MAITTNASIDQSAARTSATAWRWALRLYAGYSALFILWNAWVSSVYPKWVEEASVAVWFPSAPVGTWLERVVLLPLLRYDVLWYVGIAQHGYGHRPGDTAFHPLYPLLIGVLGRFLGGAYLLAAWLIAQVCCVALLAMLYRLVTLDDDDATAQRTTLFLIGSPLGFSFLLPYTESLLLLSIVAAWYAGRKGRWWLAGAAGGAAALTKQPGVVVVAPLLWELWQQYRVTVRTMGARALIRPLAGLSLTPLALLGWIVYRATLGDVAFSWREPGTLVSALLVTPSYADVWGETFSWPWVNFGYALNQLREHPYFYLLLNLMVMLIMLALTLASAARVRRSYAIYSLALAAMNLAIVYPLWPYMGIIRRFTIIFPMFIQLARWGRSPAVLWLTLTCNAILWTLIASMYVRNAFVP
>NC_009767.1|WP_012119313.1|997619_998033_-|DUF86-domain-containing-protein
MVRPDVIRKRLEKLDEYLAILRQLQRYSCDEFVANPERYGSAKRFLQLAIDSLNDVGNHVVAEAGLGTVDWYSDIPHRLREAGLIDSSQEETWIRMIGLRNILVHDYLKIDRTIVFRVLQENLGDLEGFKQVFAQFL

Crispr_ID: NC_009767_21

• CRISPR_ID: NC_009767_21
• CRISPR_location: 1001118-1002206
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 17 spacers

Consensus repeat of NC_009767_21

Consensus_repeat	Method
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	CRT

spacers of NC_009767_21

>21.1|1001152|21|NC_009767|CRT
ATGGTCGGGCGCCTCGCGCCT
>21.2|1001207|21|NC_009767|CRT
ATGGTCGGGCGCCTCGCGCCT
>21.3|1001262|35|NC_009767|CRT
ATGGTCGGGCCCCTCGCGCCTCGCGCCTCTTGCCT
>21.4|1001331|21|NC_009767|CRT
ATGGTCGGGCCCCTCGCGCCT
>21.5|1001386|21|NC_009767|CRT
ATGGTCGGGCGCCTCGCGCCT
>21.6|1001441|21|NC_009767|CRT
ATGGTCGGGCGCCTCGCGCCT
>21.7|1001496|49|NC_009767|CRT
ATGGTCGGGCACCTCGCGCCTCGCGCCTCGCGCCTCGCGCCTCTTGCCT
>21.8|1001579|21|NC_009767|CRT
ATGGTCGGGCGCCTCTTGCCT
>21.9|1001634|21|NC_009767|CRT
ATGGTCGGGCGCCTCGCGCCT
>21.10|1001689|21|NC_009767|CRT
ATGGTCGGGCGCCTCTTGCCT
>21.11|1001744|42|NC_009767|CRT
ATGGTCGGGCGCCTCGCGCCTCGCGCCTCGCGCCTCGCACCT
>21.12|1001820|32|NC_009767|CRT
CTTGCCTCGCGCCTCGCGCGCCTCACACCCCG
>21.13|1001886|21|NC_009767|CRT
ATGGTCGGGCGCCTCGCGCCT
>21.14|1001941|35|NC_009767|CRT
ATGGTCGGGCGCCTCGCGCCTCGCGCCTCTTGCCT
>21.15|1002010|21|NC_009767|CRT
ATTGTCGGGCCCCTCGCGCCT
>21.16|1002065|42|NC_009767|CRT
ATGGTCGGGCCCCTCTCGCCTCTCGCCTCGCGCCTCGCACCT
>21.17|1002141|32|NC_009767|CRT
CTTGCCTCGCGCCTCGCGCGCCTCACACCCCG

CRISPR arrays and Neighbor proteins around NC_009767_21

CRISPR arrays

The CRISPR arrays of NC_009767_21

>merge|NC_009767|21|1001118-1002206|CRT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCGCCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCGCCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCCCCTCGCGCCTCGCGCCTCTTGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCCCCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCGCCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCGCCTCGCGCCTTGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCACCTCGCGCCTCGCGCCTCGCGCCTCGCGCCTCTTGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCGCCTCTTGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCGCCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCGCCTCTTGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCGCCTCGCGCCTCGCGCCTCGCGCCTCGCACCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCCTTGCCTCGCGCCTCGCGCGCCTCACACCCCGCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCGCCTCGCGCCTCGCCACAAATGCGAGATACATCTCGCGCTACGCCATGGTCGGGCGCCTCGCGCCTCGCGCCTCTTGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATTGTCGGGCCCCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATGGTCGGGCCCCTCTCGCCTCTCGCCTCGCGCCTCGCACCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCCTTGCCTCGCGCCTCGCGCGCCTCACACCCCGCGCCACAAATGCGAGATAAATCTCGCGCTACGCC

>NC_009767|21|2|1001118-1002206|CRT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCGCCTCGCGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCGCCTCGCGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCCCCTCGCGCCTCGCGCCTCTTGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCCCCTCGCGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCGCCTCGCGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCGCCTCGCGCCT
TGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCACCTCGCGCCTCGCGCCTCGCGCCTCGCGCCTCTTGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCGCCTCTTGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCGCCTCGCGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCGCCTCTTGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCGCCTCGCGCCTCGCGCCTCGCGCCTCGCACCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	CTTGCCTCGCGCCTCGCGCGCCTCACACCCCG
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCGCCTCGCGCCT
CGCCACAAATGCGAGATACATCTCGCGCTACGCC	ATGGTCGGGCGCCTCGCGCCTCGCGCCTCTTGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATTGTCGGGCCCCTCGCGCCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	ATGGTCGGGCCCCTCTCGCCTCTCGCCTCGCGCCTCGCACCT
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC	CTTGCCTCGCGCCTCGCGCGCCTCACACCCCG
CGCCACAAATGCGAGATAAATCTCGCGCTACGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119318.1|1005829_1006498_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_009767.1|WP_012119312.1|995595_996834_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_083760267.1|989392_990544_-|flippase-like-domain-containing-protein	unknown	unknown	gnl|CDD|377103
NC_009767.1|WP_083760268.1|992136_993537_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012119319.1|1006494_1007934_-|glycosyltransferase	unknown	unknown	gnl|CDD|223515
NC_009767.1|WP_012119316.1|1003599_1004871_-|hypothetical-protein	unknown	unknown	gnl|CDD|200557
NC_009767.1|WP_012119315.1|998909_1000901_-|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl|CDD|273676
NC_009767.1|WP_012119310.1|993239_994319_-|DUF2029-domain-containing-protein	unknown	unknown	gnl|CDD|378217
NC_009767.1|WP_012119314.1|997989_998421_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|376187
NC_009767.1|WP_012119320.1|1008088_1009447_+|hypothetical-protein	unknown	unknown	gnl|CDD|379252
NC_009767.1|WP_012119311.1|994315_995347_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133030
NC_009767.1|WP_012119307.1|990366_991071_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009767.1|WP_012119321.1|1010445_1011912_-|polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|240533
NC_009767.1|WP_049768786.1|1002300_1003263_-|glycosyltransferase	unknown	unknown	gnl|CDD|340825
NC_009767.1|WP_049768787.1|1003241_1003496_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119317.1|1004899_1005826_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379214
NC_009767.1|WP_012119322.1|1012392_1013457_-|pseudaminic-acid-synthase	unknown	unknown	gnl|CDD|163337
NC_009767.1|WP_049768788.1|1009615_1009969_+|transposase	unknown	unknown	gnl|CDD|379129
NC_009767.1|WP_012119313.1|997619_998033_-|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|366864
NC_009767.1|WP_012119308.1|991073_992150_-|glycosyltransferase	unknown	unknown	gnl|CDD|133029

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119319.1|1006494_1007934_-|glycosyltransferase	gnl|CDD|223515	COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane].	0.00016064
NC_009767.1|WP_012119311.1|994315_995347_-|glycosyltransferase-family-2-protein	gnl|CDD|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.73393e-88
NC_009767.1|WP_083760267.1|989392_990544_-|flippase-like-domain-containing-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	4.13076e-33
NC_009767.1|WP_083760268.1|992136_993537_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.8732e-70
NC_009767.1|WP_012119322.1|1012392_1013457_-|pseudaminic-acid-synthase	gnl|CDD|163337	TIGR03586, PseI, pseudaminic acid synthase. Members of this family are included within the larger pfam03102 (NeuB) family. NeuB itself (TIGR03569) is involved in the biosynthesis of neuraminic acid by the condensation of phosphoenolpyruvate (PEP) with N-Acetyl-D-Mannosamine. In an analagous reaction, this enzyme, PseI, condenses PEP with 6-deoxy-beta-L-AltNAc4NAc to generate pseudaminic acid.	0
NC_009767.1|WP_012119316.1|1003599_1004871_-|hypothetical-protein	gnl|CDD|200557	cd10931, CE4_u7, Putative catalytic domain of uncharacterized bacterial proteins from the carbohydrate esterase 4 superfamily. This family corresponds to a group of uncharacterized bacterial proteins with high sequence similarity to the catalytic domain of the six-stranded barrel rhizobial NodB-like proteins, which remove N-linked or O-linked acetyl groups from cell wall polysaccharides and belong to the larger carbohydrate esterase 4 (CE4) superfamily.	2.39858e-68
NC_009767.1|WP_012119315.1|998909_1000901_-|asparagine-synthase-(glutamine-hydrolyzing)	gnl|CDD|273676	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family].	6.26901e-117
NC_009767.1|WP_012119310.1|993239_994319_-|DUF2029-domain-containing-protein	gnl|CDD|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	0.00158103
NC_009767.1|WP_012119313.1|997619_998033_-|DUF86-domain-containing-protein	gnl|CDD|366864	pfam01934, DUF86, Protein of unknown function DUF86. The function of members of this family is unknown.	2.64767e-30
NC_009767.1|WP_012119320.1|1008088_1009447_+|hypothetical-protein	gnl|CDD|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.91028e-23
NC_009767.1|WP_012119318.1|1005829_1006498_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.64843e-15
NC_009767.1|WP_012119307.1|990366_991071_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.54024e-15
NC_009767.1|WP_012119321.1|1010445_1011912_-|polysaccharide-biosynthesis-protein	gnl|CDD|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.37115e-25
NC_009767.1|WP_049768786.1|1002300_1003263_-|glycosyltransferase	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	1.68631e-24
NC_009767.1|WP_012119317.1|1004899_1005826_-|GNAT-family-N-acetyltransferase	gnl|CDD|379214	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions.	2.39408e-10
NC_009767.1|WP_049768788.1|1009615_1009969_+|transposase	gnl|CDD|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.23456e-10
NC_009767.1|WP_012119314.1|997989_998421_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	5.79323e-26
NC_009767.1|WP_012119308.1|991073_992150_-|glycosyltransferase	gnl|CDD|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.51211e-50

Protein sequences

>NC_009767.1|WP_012119315.1|998909_1000901_-|asparagine-synthase-(glutamine-hydrolyzing)
MCGIYGIWHRDGQPVDLMALRTATSRLRHRGPDDEGYLLANPALGACTPYAGAETDRRLGLPPLDHAGGKQDSLAFGFRRLAILDLSPAGHQPMASADERFWIVFNGEIYNYIELREELQRLGRRFRSGSDTEVILAAYAQWGAACLDRLNGMWAFAIWDRERRTLFLARDRFGIKPLYYAATGQTFAFASEIKALVGPHALPFEPEPLAVYQFLADGRLPSPQRGATFFVGVRALPPGHCLRIEADSAITPQRYYDVALPDNHHQPPSMNDIIDAYRDLFIDSVRLELRSDVAVGTCLSGGVDSSSIVCAVNRLMRQDGLSAAQIGERQKTFSAVYESDGRYNERRHIERVLRSTAADGHFVIPTVERLNADLERLAWHQDEPFQSTSIFAQWCVMGLARERGVTVLLDGQGADELLAGYRPYARYLGDLLRHGRGTTFAREMLLISARSGQSVLPLLRNALIFTLPAPAIELAYAGRQMLRAPSPVVRADFAAACRRAALADIPSWCEQTSLDRHLRDAIMESSLPHLLRYEDRNSMAFSIESRVPFLDHRLVEFVFQQAPHLRIRHGWTKWVHRQAMDGLLPDAIAWRSDKVGFETPEVAWQRDLLAARPDLFADGAACGVYLDLPAVRRAVEEWCARGGDTRRVWRWISLEIWLRVWGR
>NC_009767.1|WP_012119314.1|997989_998421_-|nucleotidyltransferase-domain-containing-protein
MFLNLERLPDIFKKYPDIHAVYLFGSAVTGRLHAESDLDLAIVPRPGAGELPRLDILTDLARAGFCRVDLVILDTNDIVLKHEVVRHNQVIYQTEDFDRGAYFSRIARQFLDFRPYLDVQRRAYKQRIVHGQARRDPQETREA
>NC_009767.1|WP_012119313.1|997619_998033_-|DUF86-domain-containing-protein
MVRPDVIRKRLEKLDEYLAILRQLQRYSCDEFVANPERYGSAKRFLQLAIDSLNDVGNHVVAEAGLGTVDWYSDIPHRLREAGLIDSSQEETWIRMIGLRNILVHDYLKIDRTIVFRVLQENLGDLEGFKQVFAQFL
>NC_009767.1|WP_012119312.1|995595_996834_-|hypothetical-protein
MAITTNASIDQSAARTSATAWRWALRLYAGYSALFILWNAWVSSVYPKWVEEASVAVWFPSAPVGTWLERVVLLPLLRYDVLWYVGIAQHGYGHRPGDTAFHPLYPLLIGVLGRFLGGAYLLAAWLIAQVCCVALLAMLYRLVTLDDDDATAQRTTLFLIGSPLGFSFLLPYTESLLLLSIVAAWYAGRKGRWWLAGAAGGAAALTKQPGVVVVAPLLWELWQQYRVTVRTMGARALIRPLAGLSLTPLALLGWIVYRATLGDVAFSWREPGTLVSALLVTPSYADVWGETFSWPWVNFGYALNQLREHPYFYLLLNLMVMLIMLALTLASAARVRRSYAIYSLALAAMNLAIVYPLWPYMGIIRRFTIIFPMFIQLARWGRSPAVLWLTLTCNAILWTLIASMYVRNAFVP
>NC_009767.1|WP_012119311.1|994315_995347_-|glycosyltransferase-family-2-protein
MGITTTHKPHTETVHQWDGASAPYLSVVVPVYNEEETIPHLYRRLTTELEHLGLPYEIIAVDDGSSDRSFALLRDLARADRRLRVVRFRRNFGQTAAFSAGFDRAQGEVVVTIDADLQNDPADIGALLAKIEEGYDVVSGWRAHRQDPFLNRRLPSIIANRLISWATGVRLHDYGCSLKAYRLEVVRGIRLYGELHRFIPAIASWQGVTVTELPVRHAPRRFGRSKYGISRTLRVLLDLVTVRFLLSYGTRPMHIFGLLGLLAGGLGMLIGAYLTWIKLAYGAAISDRPLLLLAVLLIVLGVQFMSLGLIGELVVRTYYEAQAKPIYVVREEVDGETWRGSQQ
>NC_009767.1|WP_012119310.1|993239_994319_-|DUF2029-domain-containing-protein
MRPGGTQAGFVLARWQPWTVIVAGAVLIAVIHHAYATAYTSPDLQVWWMAARLWLEGIDPYGPIGDHMLGTGSGFAYPFPAVLLCLPLTPLPLAWASTVWALMSLAVVGALPFALRDHPVPWMPTVMLAYFPLWASLEEGQWGTMLLMWTALSLYWLRTERWLPSGVVASLALLKPNVGIALLAGIVAYALCVHAPRRWWNGLGIGLLIFWAGTQALAPGWPIAWLEQLRAYDAEDQNRIDAVSMTGALAGMMVMICTFIAWRRRNVRLVLAGIVTVVLLLLPTRSFYNHVVLLLPIALLPPRVAAPVALLSWGVLALPTLSTDIVFTRAFALYLPLSIGLAATIWQTHEQEAGPLCAS
>NC_009767.1|WP_083760268.1|992136_993537_-|glycosyltransferase-family-4-protein
MASSQCQARARRNCHGRAVAVADTQFLQPCCAPAADCAAAAKSGCAGCAAELGCAGVTDSQYRHRVYSRIRALPAAINRAGSDNMADARAGGWPVVRILTLNYEYPPLGGGASPVTRALCEHLAAVGHEVDVVTMGYQHLPQFEISGRVRVIRVPALRRSMVRAETPELLSYIASALLPTLALTQRRRYNVVHAHFIVPTGILAAAVRRVSGLPLVITAHGSDVPGYNPDRFTRGHRLIAPVWRVVAHSADVIVSPSHYLRALIQRTCERPVEVIPYGFDPPPVRISKRKRRILFVSRLFPRKGAHYLLEALAGLPLDGWEITIAGDGPMLEALQAQAQHLGLSVDWRGFIKGAPLDELYASSAIFVFPSTNDNFPVVLLEALAGGCAVITTNISGMPEVVGDAGILVPPQDVPALRDAIRRLMNDDDLRADLSARARARIAHFAWDNVIRRYLEVYQGAGVYGNV
>NC_009767.1|WP_012119308.1|991073_992150_-|glycosyltransferase
METFDPGVTIVLITYNSAAYVRECLQSVRCAAPEVHVLIVDNASTDNTVEIVRRDFPECTLVPLPQNIGHSAACNLALQRAKTAWVLFLDHDTTTPVGWLEPLLAIAAATWPDVGMVGSRAVLVEQGRIHHDGGYAHYVGHMTLRNGFAPLADVACDTTPVEVGAQASTSLLVHRERALAVGGFDPRFFIYLNDFDLSLRMRLRGWRCYVAPESVVYHRQGNPETSWRGSGDYPERRAYLIYRNRWMLIARMYALRTLMVCLPALVVYEMALAAIALRKGWRRAYWRAFRDVVRLWPALRFHRSRIQSSRRISDRELLSAYGFSYVPGLLRHPAEQAIQQVFERAFAAYWRLVQPLLE
>NC_009767.1|WP_012119307.1|990366_991071_-|class-I-SAM-dependent-methyltransferase
MPFYDYYGERAATAAGIGWVRAQARYVLDRLMQASPSAASLLEIGPGRGVFADACRQHHVRYCALDINIRLLRGLADRSHNGMQARATQIPCADEMFDITFASHVIEHSPAYNDALAFLEEMRRVAKRGGLVAIVAPDYLALREDFWNCDYSHSFVTTRRRLRQMYHDTGLTILDECNLYGPLTGIVGWCAGQTFGGHVMGMIARTVPGIVGEKLYKLRLTFAGAILMIGRVAG
>NC_009767.1|WP_083760267.1|989392_990544_-|flippase-like-domain-containing-protein
MQPLWSAHRHSGMVCRANIRWTRHGHDRPDSAGNSWRETLQTTADFRGGNPDDRSSSRMKHWSHWIRVGLGIALIVLLVVQFANTRSVWQTIIAAHPFPLAGSIVIYFVGVMLSCLKWHLLLRAQGIRASFARLVEWYLMGALAGTLLPSDIGGDLGRGYAAARALGNRAGVWTSVVMERLTGLLALVAMASLTLAFLPDVLDAPAWAPIGAGLGMALTTVGFAALSGFLPLRLARVPHWMERIIAQLQDVITPYRNNLGTIVACLGLSVMFHTNNALSFWLLAISVKSDAPVATMILWPLAGVFGLLPLTPGGLGVREGVTAALLMRVGLTPDQAVAAAMIARMLLLLCSLTGLPTLVAIISSIDKRASTTGKKEMPDDAQA
>NC_009767.1|WP_049768786.1|1002300_1003263_-|glycosyltransferase
MAAFYVLELWYWLQRLYRQAFEQLRQIRADLVFANDWSALPLGWRLAARWNTPMILDLHEYAPLEWEEQWKWRLFAAPMTVYFLRHYAVHAAATLTVAPEIAQRYGEEFGFLPTVVLNAPEYVALEDHAVDPHTVRLIHHGGALRARNLELMIDTIRLCDRRYHLSFMLVGDEGYIRRLHAYADRVAPGRVTFLDPVAPDQIVPKIASFDIGIFLLQPTNYNYSIALPNKLFDFIHAGLAVCVGPSPGMAAFVREWRCGVVAPSFDPAEVAATLNRLGVDEIRAMRQAARVAAAAINASTEMTKVVELCNRLLRRAQAAR
>NC_009767.1|WP_049768787.1|1003241_1003496_-|hypothetical-protein
MQTSRPTICIISFSPIARDARVLRQIDHLTPHYDLVVLGYGAPPKRWRNADSVRWFSVDPPRWYEMQHLKALLVAGRVWQPSTC
>NC_009767.1|WP_012119316.1|1003599_1004871_-|hypothetical-protein
MDCESKSPSATTYAQRHIDCVLGIRGIRLDASLEYTIFREISRLPEAETKVRDQWGNWEWTFSDAQREGKLYRPWLDEPLAELRHRLMQEHPEWPWEPLWPDGHSFALCLTHDVDIISQYPTFGSLFRNFSRIYRCDERRLELVYQLTGTLFLIRPFRSAKDPLWHYEDWLKLEDRFRFRSTFFFFPYRLIKPASVDANYHPNEKIVFAERAMTVGQMMQVIHHSGWEIGLHGSYHSATEPNILKYERQQIESILNDNIVSVRQHWLHYDVHQTPRLQLEAGLRCDSTQGFNRSIGFRAGTSFPYWCWDHSTKSELSILEIPQHIMDGALFTTNALEYDVELAVLHCIQLMDRVAQVGGCLTLSWHPNYLNDEKWWFVYQTLLEEGKRRNAWGCTAGQLYAWWTQREKRLQWAPLSAKDASLL
>NC_009767.1|WP_012119317.1|1004899_1005826_-|GNAT-family-N-acetyltransferase
MWIFHQAWWLDAVAPNSWGEITVEQGGKIQARLPYVIKQKYGLKIITMPPLTPFLGPWIRNAKGKYVNRLSVEKELIGELFERIPQFDLFLQNFHHSVTNWQPLYWKEFQQTTHYTYLIPDLTNLDKVWENLKESARREIRKATYRFNLMVRTDLNIDDFLDLHIRTFRRQGKELPYPVSLVQRLDETCLKYNTRKIFIAEDVQGRRHAGVYIVWDEDSAYYLMGGGDPELRSSGATSLCMWEAIKFASTVTKSFDFEGSMIEPIERFFRSFGAYQTPYFQVMKYNSLPLKIYADVRSWTKILLRRKS
>NC_009767.1|WP_012119318.1|1005829_1006498_-|class-I-SAM-dependent-methyltransferase
MINPKRWKSFWDVQVTPLHYGDTEEWYRKFAEEINALIDTAGYAGGPVLESGCGNGALFKYLLINKSEYVGVDFSKRMLQIFRSRFSDVNLICADAAVFYVNRHFELIFSNGVVQYFNHAMIQRYVHNSFHMLKKGGVLLIANVPWKDLRSGYVSGTLYQEPVVDSRHRFTRNLLSLLKGDGLGYWYNPQDFFGFSRLGFRVTLFGSLYHPYRFSISLKKEF
>NC_009767.1|WP_012119319.1|1006494_1007934_-|glycosyltransferase
MKPQQGPFCPDLKHQFAKANQRLVEMEEKYDLLHFQIDGWCVWPLLRFSVGSLLYGFEYSHSTARYSYFDLASAAAVDLYKILTASSREVVVRAYDSNRSEKRGEKFIDIFFDDLLVHTGSYFKIEILSNPIFSEARKAALVKADMTSTLFGFIAKLLSKTISSQEIHKISREISIVLSKKEGLENFKQEYIYTVINNFIWSYRLYRWLFRKIRPRYLLIVNPYGDHAVVAAARSMDVEVIEFQHGYIVPWHVGYSWPKYARNYKKHMPIPDKIFLYGEYWRQFLITDGFWDESELIVVGSLRMDYHRQTNLSRPKGTVRLLWTTQPIAVDKSIDFMVKFLEEYTGTTPLEIYIKLHPGETSKAKYEDAFKSFKFVKVLNSTEMPSVFDILRSSHIHVSLSSTCHFEALALGIPTVVLPVEGHEHVTPLKEFSGAFLAENPRDLVEIINNLENITISSSTSHLLFANDSLNNIKKEIGL
>NC_009767.1|WP_012119320.1|1008088_1009447_+|hypothetical-protein
MRNLPRAIIPVLRKFELLFSERVWEWAKILLIGAILAPGKRTVTSALRVMGLSDDAQFQNCHRVLNRAVWSPYAASRILLRLLVDAFVPSDTAIVLGLDDHIERRRGAKIKAKGIYRDPVRSSRSFFVKTSGLRWLCLMLLAPIPWAQRVWALPFLTVLAPSERCHQELGKRHKQLTDWARQIIFQVRQWLPERVLVVVADSSYAALELLAACQGLPNPVTVVTRLRLDAALYDTAYVHPAGRPGRPRKKGARQPTLEQRRSDPTTDWQHTSVRWYGGTTRTVRLASATAVWYHSGLPPVSIRWVLITDPDGKFEAQALLSTNPAATPKESVEWFVMRWQVEVTFEEARAHLGIETQRQWSDLAILRTTPVLLGLFSLVTLFAHHLLQAGELPVRQAAWYTKALPTFSDTLAFVRKQLWPVTISWMSPAEADMVKIPKSLLVRLTDALAYAA
>NC_009767.1|WP_049768788.1|1009615_1009969_+|transposase
MVALTSTVVHSEHSPTNLTDERQDLIRSYVEVQTETESRQRADLRAVLNGLRSKLKRGCWWGLLPRLFPPKSTVRSSLQKWVEKGTLVKINDVLRLRVWGDAEERERVETTGGVIDV
>NC_009767.1|WP_012119321.1|1010445_1011912_-|polysaccharide-biosynthesis-protein
MKSEIKGLILTSVIYGIGDILLKAFNFFLLPIYTRLLNPSDYGILAVTGFLSFIMSIFMSLSLHSFLTPLYFSTGNHQERRENIGSLFLLSILVGGVIALSIDQVARPFFSLVIRDVPFDPYIRLTIWTSYLSTWSRIPLLLLRVRERSFAYVLITLSSSLLQTVLSIWFVVYLKRGIEGLLIANLIATSVTSVICLISVSSNMILSLKVKIWKHALIFSLPLIPHELSGWILELSDRAILQWYVSLDQVGIYSLAYSYGSLITLIGYAMNMAWVPFLHKTDSIEGERASERFSYMATYFTVTLCFFGLFLGLAAKPVISLITTALFHDAGGIAPLIVAALLLSNIYYFPVNFIFLRRKTTKVAFATVVSSFTNIILNLWLIPVHGVIAAAWTTFISYGVMTLLTWYFSLKVYPIFYQYRRLMVVFLISAFLWVIGVVYPWNSFWFEIMGKLVLLAAFPALLIIFGFFTEKEKSYLRLALRSYPIFQR
>NC_009767.1|WP_012119322.1|1012392_1013457_-|pseudaminic-acid-synthase
MSTYITIKDRHIGKSSPVYIIAEISANHNQDFDQAVRIVHAAKDAGADAVKLQTYIPDTLTIRSDKECFRIKSGTLWDGRTLYDLYSEAYTPWEWQPKLKTIANEIGIDLFSTAFDPTAVDFLEEMDVPAHKVASFEIVDIPLIEKMARTGKPLIISTGMATLGEIEEAVQSARNAGATQIALLKCTSSYPALPEEMNLRTIPHLAEAFGVPVGISDHTLGIAVPITAVALGACIVEKHLTLSRAIPGPDSSFSLEPHEFSAMVKAIRTVEKALGKVQYGVSGREMGSRVFRRSLFVIKDMKAGEMFSLENVRSIRPGHGLSPKYLDEILGRKAAKDIERGTPLSWDLIDTYKS

Crispr_ID: NC_009767_22

• CRISPR_ID: NC_009767_22
• CRISPR_location: 1020266-1020374
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_22

Consensus_repeat	Method
CCATCCGCCTGCTCCCTTCCATTCCTCGTCTCTCAAG	CRISPRCasFinder

spacers of NC_009767_22

>22.1|1020303|35|NC_009767|CRISPRCasFinder
CTTGTTCGACATCATTGACAATCTGGCCAATCCCA

CRISPR arrays and Neighbor proteins around NC_009767_22

CRISPR arrays

The CRISPR arrays of NC_009767_22

>merge|NC_009767|22|1020266-1020374|CRISPRCasFinder
CCATCCGCCTGCTCCCTTCCATTCCTCGTCTCTCAAGCTTGTTCGACATCATTGACAATCTGGCCAATCCCACCATCCGCCTGCTCCCTTCCATTCCTCGTCTCTCAAG

>NC_009767|22|19|1020266-1020374|CRISPRCasFinder
CCATCCGCCTGCTCCCTTCCATTCCTCGTCTCTCAAG	CTTGTTCGACATCATTGACAATCTGGCCAATCCCA
CCATCCGCCTGCTCCCTTCCATTCCTCGTCTCTCAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_041330185.1|1015361_1016084_-|acylneuraminate-cytidylyltransferase	unknown	unknown	gnl|CDD|133011
NC_009767.1|WP_012119325.1|1016686_1017889_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase	unknown	unknown	gnl|CDD|274662
NC_009767.1|WP_012119336.1|1032444_1033239_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009767.1|WP_012119326.1|1017885_1018863_-|UDP-N-acetylglucosamine-4,6-dehydratase-(inverting)	unknown	unknown	gnl|CDD|132628
NC_009767.1|WP_012119337.1|1033241_1034534_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340825
NC_009767.1|WP_012119319.1|1006494_1007934_-|glycosyltransferase	unknown	unknown	gnl|CDD|223515
NC_009767.1|WP_157042536.1|1023627_1024020_-|four-helix-bundle-protein	unknown	unknown	gnl|CDD|377534
NC_009767.1|WP_157042535.1|1016205_1016547_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|132626
NC_009767.1|WP_157042775.1|1034530_1035523_-|glycosyltransferase	unknown	unknown	gnl|CDD|133029
NC_009767.1|WP_012119334.1|1029312_1030881_-|hypothetical-protein	unknown	unknown	gnl|CDD|379080
NC_009767.1|WP_012119330.1|1024351_1024990_-|N-acetyltransferase	unknown	unknown	gnl|CDD|100048
NC_009767.1|WP_041331588.1|1022095_1023277_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl|CDD|99740
NC_009767.1|WP_012119331.1|1025275_1026346_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl|CDD|340819
NC_009767.1|WP_012119320.1|1008088_1009447_+|hypothetical-protein	unknown	unknown	gnl|CDD|379252
NC_009767.1|WP_012119332.1|1027245_1028283_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_012119321.1|1010445_1011912_-|polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|240533
NC_009767.1|WP_012119323.1|1013453_1014962_-|UDP-2,4-diacetamido-2,4,-6-trideoxy-beta-L-altropyranose-hydrolase	unknown	unknown	gnl|CDD|274663
NC_009767.1|WP_012119322.1|1012392_1013457_-|pseudaminic-acid-synthase	unknown	unknown	gnl|CDD|163337
NC_009767.1|WP_049768788.1|1009615_1009969_+|transposase	unknown	unknown	gnl|CDD|379129
NC_009767.1|WP_157042774.1|1030953_1032210_-|glycosyltransferase	unknown	unknown	gnl|CDD|340825

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_041330185.1|1015361_1016084_-|acylneuraminate-cytidylyltransferase	gnl|CDD|133011	cd02518, GT2_SpsF, SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat. Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.	4.17145e-103
NC_009767.1|WP_012119325.1|1016686_1017889_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase	gnl|CDD|274662	TIGR03588, PseC, UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.	0
NC_009767.1|WP_012119336.1|1032444_1033239_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	3.0765e-18
NC_009767.1|WP_012119326.1|1017885_1018863_-|UDP-N-acetylglucosamine-4,6-dehydratase-(inverting)	gnl|CDD|132628	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase (inverting). This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.	0
NC_009767.1|WP_012119337.1|1033241_1034534_-|glycosyltransferase-family-4-protein	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	2.70319e-45
NC_009767.1|WP_012119319.1|1006494_1007934_-|glycosyltransferase	gnl|CDD|223515	COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane].	0.00016064
NC_009767.1|WP_157042536.1|1023627_1024020_-|four-helix-bundle-protein	gnl|CDD|377534	pfam05635, 23S_rRNA_IVP, 23S rRNA-intervening sequence protein. This family consists of bacterial proteins encoded within an intervening sequence present within some 23S rRNA genes. It folds into an anti-parallel four-helix bundle and forms homopentamers.	6.30823e-28
NC_009767.1|WP_157042535.1|1016205_1016547_-|methyltransferase-domain-containing-protein	gnl|CDD|132626	TIGR03587, Pse_Me-ase, pseudaminic acid biosynthesis-associated methylase. Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme.	8.37714e-10
NC_009767.1|WP_157042775.1|1034530_1035523_-|glycosyltransferase	gnl|CDD|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.15654e-39
NC_009767.1|WP_012119334.1|1029312_1030881_-|hypothetical-protein	gnl|CDD|379080	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.	2.30295e-08
NC_009767.1|WP_012119330.1|1024351_1024990_-|N-acetyltransferase	gnl|CDD|100048	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain. WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity.	2.66328e-59
NC_009767.1|WP_041331588.1|1022095_1023277_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl|CDD|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	2.10028e-160
NC_009767.1|WP_012119331.1|1025275_1026346_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl|CDD|340819	cd03786, GTB_UDP-GlcNAc_2-Epimerase, UDP-N-acetylglucosamine 2-epimerase and similar proteins. Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family (EC 5.1.3.14) are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.13214e-140
NC_009767.1|WP_012119320.1|1008088_1009447_+|hypothetical-protein	gnl|CDD|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.91028e-23
NC_009767.1|WP_012119332.1|1027245_1028283_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	8.89111e-50
NC_009767.1|WP_012119321.1|1010445_1011912_-|polysaccharide-biosynthesis-protein	gnl|CDD|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.37115e-25
NC_009767.1|WP_012119323.1|1013453_1014962_-|UDP-2,4-diacetamido-2,4,-6-trideoxy-beta-L-altropyranose-hydrolase	gnl|CDD|274663	TIGR03590, PseG, UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.	3.56958e-61
NC_009767.1|WP_012119322.1|1012392_1013457_-|pseudaminic-acid-synthase	gnl|CDD|163337	TIGR03586, PseI, pseudaminic acid synthase. Members of this family are included within the larger pfam03102 (NeuB) family. NeuB itself (TIGR03569) is involved in the biosynthesis of neuraminic acid by the condensation of phosphoenolpyruvate (PEP) with N-Acetyl-D-Mannosamine. In an analagous reaction, this enzyme, PseI, condenses PEP with 6-deoxy-beta-L-AltNAc4NAc to generate pseudaminic acid.	0
NC_009767.1|WP_049768788.1|1009615_1009969_+|transposase	gnl|CDD|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.23456e-10
NC_009767.1|WP_157042774.1|1030953_1032210_-|glycosyltransferase	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	7.9879e-29

Protein sequences

>NC_009767.1|WP_012119326.1|1017885_1018863_-|UDP-N-acetylglucosamine-4,6-dehydratase-(inverting)
MNWHEVVVLVTGGTGSFGKKFAKIMLEDYQPEKVIIYSRDELKQHEMRIAGFDHPSIRYFIGDVRDLARLRRAMYGVDIVVHAAALKQVPACEYNPIEAVMTNINGARNVIDAAIDMGVKKVVAISTDKAVNPVNLYGATKLCAEKLFIQSNSYSGSTGTRFSCVRYGNVVGSSGSVIPLFREQRRSGRITVTDPRMTRFWITLDQGVRFVIRCIEQMHGGEVFVPKIPSMNIMDLAKAIAPDCVVESIGIRPGEKLHEVLISEDEARHTLELEDMYVVQPRYPWWQVKDWEGGKPLPEGFRYASNTNSQWLSVSELRVLAEDLI
>NC_009767.1|WP_012119325.1|1016686_1017889_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase
MIAASEKLAIDGGVPVRQNPLPYGKQWLEDDDITAVIEVLRSDWLTTGPKVSEFEQEFAGFVDSKEAVAVSSGTAALHAAMHAIGIGPGDEVIVPAMTFAATANCVVFQGGTPVFVDVDPATLLIDPVQVETKITPRTRAVIAVDYAGQPCDYDALRDIADRYKLILVADACHALGGQYKGRPVGSLADISTFSFHPVKHITAGEGGMITTNNPELARRMRTFRNHGIPIDHRQREQQGSWFYEMVELGYNYRLSDIQCALGLSQLRKLPRWLNRRQEIARHYDAAFYGVPVVRPLHVRADVSHAYHLYVIRLDCQQLRTTRTEVFKALRAEGIMVNVHYIPVHLHPYYRQRLGCREGEYPVAESIYNQLISLPIFPAMTDEDVKDVIKAMDKVIAAYRK
>NC_009767.1|WP_157042535.1|1016205_1016547_-|methyltransferase-domain-containing-protein
MTYQRKIWEGDFGKAYTDRNVIDWRTRLPAFRKMLDGLLVEQVCEVGCNRGHNLIALAELIGEPSNIIGVEPNQHALEIARASSVKIGCLYGHAMRSLSLITLMKIYCGNAIF
>NC_009767.1|WP_041330185.1|1015361_1016084_-|acylneuraminate-cytidylyltransferase
MRIVAIVQARTGSTRLPRKVLIELCGEPMLKRVVNRTARSAILHDVIVATTIEQEDETIVELCKKHGWPCFCGSINDVLDRYYKAARDYRVDVIVRITSDCPLIDPCIIDLVISKFLEKNPLDYASNTVQRSFPRGLDVEVVSFEALERAWHEDCNPLWREHVTPYIYLHPEKFALTAVVNNKDYSYMRWTVDTPEDLDFVRRVYDHFGHDNFSWKEVLAVLDEHQDWLAINSHIQQKVI
>NC_009767.1|WP_012119323.1|1013453_1014962_-|UDP-2,4-diacetamido-2,4,-6-trideoxy-beta-L-altropyranose-hydrolase
MMSYLPNLVIRADASTRIGTGHVMRCLALAQAWQDAGGQAIFVMVMDIPALTQRLETEGMHVLRIKAEAGSLDDAAYTIDIARQLGADWLVIDGYHFDSHYQYSIKDAGLKLLCIDDISHLNHYYADIILNQNLHAEDLVYSCESNTRLLLGTKYVLLRREFLRWQKWEREISEVTRNVLVTMGGSDPDNVTSKVIRSLKEVAIDGMEAKIVLGGGNLHLKELRSVVQDLAFPVFLETNVRNMPEVMAWADVAVSAGGITCWELAFMRLPSLIITLTDNQRANNEKLAMVGSFVNLGWHTHISYSELAKEFLSLSAKPETRAKMASLGRNLVDGDGIERTLMHLRCNAFYLRHLKESDGQLLWKWANDPDVRAASFLSNPVEWDYHIQWFQSKLTDNLCQFYIAINDTGNSIGQVRYDIDDREAVISISLDSAFRGKGYGTEVIRKSSQKLFSSSNVEKIHAYVKPDNMASVKAFMKAGFKLSGTTVVKGQEALHFVLARPR
>NC_009767.1|WP_012119322.1|1012392_1013457_-|pseudaminic-acid-synthase
MSTYITIKDRHIGKSSPVYIIAEISANHNQDFDQAVRIVHAAKDAGADAVKLQTYIPDTLTIRSDKECFRIKSGTLWDGRTLYDLYSEAYTPWEWQPKLKTIANEIGIDLFSTAFDPTAVDFLEEMDVPAHKVASFEIVDIPLIEKMARTGKPLIISTGMATLGEIEEAVQSARNAGATQIALLKCTSSYPALPEEMNLRTIPHLAEAFGVPVGISDHTLGIAVPITAVALGACIVEKHLTLSRAIPGPDSSFSLEPHEFSAMVKAIRTVEKALGKVQYGVSGREMGSRVFRRSLFVIKDMKAGEMFSLENVRSIRPGHGLSPKYLDEILGRKAAKDIERGTPLSWDLIDTYKS
>NC_009767.1|WP_012119321.1|1010445_1011912_-|polysaccharide-biosynthesis-protein
MKSEIKGLILTSVIYGIGDILLKAFNFFLLPIYTRLLNPSDYGILAVTGFLSFIMSIFMSLSLHSFLTPLYFSTGNHQERRENIGSLFLLSILVGGVIALSIDQVARPFFSLVIRDVPFDPYIRLTIWTSYLSTWSRIPLLLLRVRERSFAYVLITLSSSLLQTVLSIWFVVYLKRGIEGLLIANLIATSVTSVICLISVSSNMILSLKVKIWKHALIFSLPLIPHELSGWILELSDRAILQWYVSLDQVGIYSLAYSYGSLITLIGYAMNMAWVPFLHKTDSIEGERASERFSYMATYFTVTLCFFGLFLGLAAKPVISLITTALFHDAGGIAPLIVAALLLSNIYYFPVNFIFLRRKTTKVAFATVVSSFTNIILNLWLIPVHGVIAAAWTTFISYGVMTLLTWYFSLKVYPIFYQYRRLMVVFLISAFLWVIGVVYPWNSFWFEIMGKLVLLAAFPALLIIFGFFTEKEKSYLRLALRSYPIFQR
>NC_009767.1|WP_049768788.1|1009615_1009969_+|transposase
MVALTSTVVHSEHSPTNLTDERQDLIRSYVEVQTETESRQRADLRAVLNGLRSKLKRGCWWGLLPRLFPPKSTVRSSLQKWVEKGTLVKINDVLRLRVWGDAEERERVETTGGVIDV
>NC_009767.1|WP_012119320.1|1008088_1009447_+|hypothetical-protein
MRNLPRAIIPVLRKFELLFSERVWEWAKILLIGAILAPGKRTVTSALRVMGLSDDAQFQNCHRVLNRAVWSPYAASRILLRLLVDAFVPSDTAIVLGLDDHIERRRGAKIKAKGIYRDPVRSSRSFFVKTSGLRWLCLMLLAPIPWAQRVWALPFLTVLAPSERCHQELGKRHKQLTDWARQIIFQVRQWLPERVLVVVADSSYAALELLAACQGLPNPVTVVTRLRLDAALYDTAYVHPAGRPGRPRKKGARQPTLEQRRSDPTTDWQHTSVRWYGGTTRTVRLASATAVWYHSGLPPVSIRWVLITDPDGKFEAQALLSTNPAATPKESVEWFVMRWQVEVTFEEARAHLGIETQRQWSDLAILRTTPVLLGLFSLVTLFAHHLLQAGELPVRQAAWYTKALPTFSDTLAFVRKQLWPVTISWMSPAEADMVKIPKSLLVRLTDALAYAA
>NC_009767.1|WP_012119319.1|1006494_1007934_-|glycosyltransferase
MKPQQGPFCPDLKHQFAKANQRLVEMEEKYDLLHFQIDGWCVWPLLRFSVGSLLYGFEYSHSTARYSYFDLASAAAVDLYKILTASSREVVVRAYDSNRSEKRGEKFIDIFFDDLLVHTGSYFKIEILSNPIFSEARKAALVKADMTSTLFGFIAKLLSKTISSQEIHKISREISIVLSKKEGLENFKQEYIYTVINNFIWSYRLYRWLFRKIRPRYLLIVNPYGDHAVVAAARSMDVEVIEFQHGYIVPWHVGYSWPKYARNYKKHMPIPDKIFLYGEYWRQFLITDGFWDESELIVVGSLRMDYHRQTNLSRPKGTVRLLWTTQPIAVDKSIDFMVKFLEEYTGTTPLEIYIKLHPGETSKAKYEDAFKSFKFVKVLNSTEMPSVFDILRSSHIHVSLSSTCHFEALALGIPTVVLPVEGHEHVTPLKEFSGAFLAENPRDLVEIINNLENITISSSTSHLLFANDSLNNIKKEIGL
>NC_009767.1|WP_041331588.1|1022095_1023277_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MPLLDLKAQYIAIRDEIRAAIDRVADAQMFILGPEVEALEREVAAYSGCAYGIGVSSGTDALLVALMAIDIQPGDEVITTPYTFFATAGSIARLGAVPVFVDIDPLTFNIDPAGIEARITPRTRVIMPVHLYGQMADMDPIMEIAQRHNLIVIEDAAQAIGSEYKGRRAGAIGHMGCFSFFPSKNLGGFGDGGMVTTNDAALAERVRLLRGHGAHPKYYHKLIGGNFRLDALQAAVLRVKLKYLDDWTAGRQRNAAIYRRLFSEAGLVTDPPDCLTDGCRARSTGACALPPGKVVLPVKAPERRHIYNQFVIRVSQREKVMATLKARKIGHEIYYPVPLHLQECFAYLGHRPGDLPVSECAAAETLALPIYPELTDEMLEAVVDAVASGVRGE
>NC_009767.1|WP_157042536.1|1023627_1024020_-|four-helix-bundle-protein
MSNEAAGKSISRIERFEDLEAWQQARKLVNTVYNLSDVGAFARDFTLRDQRRRAAVSIMSNIAEGFESRTQSLSIERLGRAKASYGEVRSQLYLAYNRQYVSGEVFEQTLAQAESASRLIHGLIRYTNDL
>NC_009767.1|WP_012119330.1|1024351_1024990_-|N-acetyltransferase
MNIDRLYYAHPTAIIDEPCEIGAGTKIWHFCHVMAGARIGANCVLGQNVLVAGGVIIGNGCKIQNNVSLYTGVELEDFVFCGPSCVFTNVINPRAEINRRAEFLRTLVRRGATIGANATIICGATIGRYAFIGAGAVVRGDVPDYALMLGVPARRCGWMSRHGYRLPEPDADGVMVCPGSGWRYRLVAPEAVQCEDWGEEEALKVKGGQVEG
>NC_009767.1|WP_012119331.1|1025275_1026346_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MSKPLTIVTIVGARPQFIKAAAVSRVLRARHREVLVHTGQHYDANMSAIFFDELGIPPPDVNLAVGSAGHGAQTGAMLAKIEEVLLAEHPDWVLVYGDTNSTLAGALAAAKLRIPVAHVEAGLRSFNRAMPEEINRVLTDHLSDLLLCPSQTAIDNLAREGITRSVILVGDVMADALRLAAERADTPVLESFGVQPGDYALATVHRAENTDDPLRLQGILIGLTLLDMPVIFPAHPRARRAIAALEWTPPAHVRLVEPVGYLGMVALMRGARVILTDSGGVQKEAYWLGVPCVTLRDETEWVETVAHGWNTLVGADPERIVAAARQPYPTTPHPPLYGDGHAAERCVAALEKGGEG
>NC_009767.1|WP_012119332.1|1027245_1028283_-|Gfo/Idh/MocA-family-oxidoreductase
MADTSQQSRQTATRRRIPPVAVIGCGYWGKNLVRNFYHLGALAMVCDSTEAGRAAAAQIAPDVPVVASLDEVTAGAVVIATPAVTHYDLARQALETGRDVFVEKPLALTYAQGARLVQIAREQRRILMVGHVLEYHPAVVRLIDMVRSGALGDIYYIYSNRLSLGKVRREENILWSFAPHDIAIILRLLGAMPVQVSAAGGNYIQPNIADVTVTNLLFDNGVRAHIHVSWLHPFKEQRLVVIGSQKMASFDDVAKELVLYDQRVEVREGEPVPVRGAGERVAFDATEPLRLECEAFLRAVLTREPPLTDGESGLRVLRVLQAAQRSLVTNGEPVPLLVETLQDQG
>NC_009767.1|WP_012119334.1|1029312_1030881_-|hypothetical-protein
MDHSISSIKESETTIAQRRAHRIASWSALSIVLLALSLWNLDGPAMWWDEGWTLSVARNWAEQGHYGRLRNGQRARPGLEAAFTTTLPVGMMMRAFGVGLWQGRLFGALCAVAVVLLLAALAARLYDRRVAVATVVAALCMTAFPTIHPLLLGRRVLAEIPMLMYLLVGYLFLWRALVNRWVALFPAALFLALAWVSKAQLSPFLIVSLTMSALVAALMRRWRIAALFTLVAGGTVLGARILQQSVYPILIDAQLPPDPTTGLIETVAIVTAPARRLDAIQNLAIFGLPALCGMLWGTWRLWHDRSAASSGAPVWYTRLTLLALCGSWLAWYLVFSIGWVRYMGPAIIVASIFVADLLANATDGFAIRHSLVSLINLLTLRRWTRTGGAALFGTVLVLWGGTLTAVSVAATYPVRDYSAQRVAQWLNAQPEGTRIETYETELHFLLDQPYTFPPDQVHVALLRRLWEIDDNVLIAYDPMVNDPDFLVEGGTSVAKLYESTLASGRFRLVLEDGPYRVFERVR
>NC_009767.1|WP_157042774.1|1030953_1032210_-|glycosyltransferase
MRVGKTAKYLRQFGHEVRIVTARNLPYPADLPFEVPSEHVIATPWVDVSMPHTLATRLRRHRSGVVALFDKAPAGQMQYTIALRLLDAYRALVAFPDDAIGWFPFGWNAAQRLLKRWRPDVLVASSGPPTSLLIANALHQQYNLPWVGELRDLWTDNHYYSYPMWRRVLETWLERRTLRTAAGLVTVSEPLAHALRLRYNLPTEVVLNGFDPADYPPMRPTRADPQLTIVYTGTIYRINQRAAPLFAALQRLGARAARVRVTVYSHSISGIVAIRSEAQQYGVEHLLDVRDAVPHREALAQQRAADVLLLLLWNDPRERGVYTGKLFEYLGARRPILGIGPADNVAADLIRERRAGMVSADPVEIAGQLTRWLDAKECGGIPDLPASASAGLSREEQTRRLERFLGQVIDRYNISSDT
>NC_009767.1|WP_012119336.1|1032444_1033239_-|class-I-SAM-dependent-methyltransferase
MPQLLDYPTYAWQVWRGARSRGEADLDRCRRADVAGYVDFSRPLTILDLANGRLRPQYAILRAQGHRVVGIDLVNRPVTSWKARAYAVARALYAKRLRLPPAVMRANALVCGDVGRLPFPDATFDLVTSVAAFEHFLDVPAVVAEVARVLKPGGVVWAAIHVFTAPSGGHNLSFAEVPLRHVPPGVDPWDHLRRRQLPFSVPLNEWRIRDYLAVFGRHFEIIRHYCHMREGEHLLTPEIEAELTARGYTRDELTCGAYVIAARR
>NC_009767.1|WP_012119337.1|1033241_1034534_-|glycosyltransferase-family-4-protein
MTAIHRSERRLLMISYYYAPTENPGTRRVGAFVRYLPQYGYRPAVLTTSSYGALADDEERLIFRAPDILDIGRWLARRIKNGQVAATGTSWSPIVTPDSTLSRALNKILIPDIHTGWLPGAVLRGIQVLRAGTFRAIFSSAPPPSAHLTALALKRLSGLPWVADFRDGWTFEPPDPTLLRSVARMRIERALEEAVVRNADQIVTVNQVLADDLRRRHPFVNVTVISNGYDAAEVGTLRPHTKGERLRVVHTGALAHSRSHTNVAGLLAALDNLRQNRSSVLADLEVCFIGNLGAAEQEALTCNGRRRPITIQGPVPHHEALQRQAEADVLLLVTAPNAASVTTSKLFEYLASGRPILALTGRSAAAALIEEFNAGIVVAPDDVDGICRALEWFYERWCSNNLPTRVDPRVQRFERRSLTGELAKIFDTLM
>NC_009767.1|WP_157042775.1|1034530_1035523_-|glycosyltransferase
MRPLLSTVIVNSDGCADTLRCMESLCAHPPDLAALAPRAGALPEHEIILVDNRSRDGCVTLVRERFPAVRILESPARQGFSKNYNLGIRHANGVFVLALNNDTLVHPGALTTLLNAILDTPAYGMVGPRLIGRDGWVQAVCARPVLTPLEYLLTQSIADPGFPIGRLWLLSQQISVARRRSGSVPCISGACMLVRRTAFEQAGLFDEAVDFYYEDIEWCHRMACHGWQVGYVAEATITHLGDQSIRNVKVWAKKSEYFSALRYFRRYHGLTDEGARVLRAATSFGWLMRGIAFVLAEGLFGLKGHARAYLYLWHWILRDPSARPDRVESQ

Crispr_ID: NC_009767_23

• CRISPR_ID: NC_009767_23
• CRISPR_location: 1027108-1027217
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_23

Consensus_repeat	Method
GACGCGCCAGACCCCTCGCGCGGCTCGGGGTGAC	CRISPRCasFinder

spacers of NC_009767_23

>23.1|1027142|42|NC_009767|CRISPRCasFinder
AATGCCCTTGCCTGTATTGCGCTGTAAGAAAATTCCCCATCA

CRISPR arrays and Neighbor proteins around NC_009767_23

CRISPR arrays

The CRISPR arrays of NC_009767_23

>merge|NC_009767|23|1027108-1027217|CRISPRCasFinder
GACGCGCCAGACCCCTCGCGCGGCTCGGGGTGACAATGCCCTTGCCTGTATTGCGCTGTAAGAAAATTCCCCATCAGACGCGCCAGACCCCTCGCGCTGCTCGGGGTGAC

>NC_009767|23|20|1027108-1027217|CRISPRCasFinder
GACGCGCCAGACCCCTCGCGCGGCTCGGGGTGAC	AATGCCCTTGCCTGTATTGCGCTGTAAGAAAATTCCCCATCA
GACGCGCCAGACCCCTCGCGCTGCTCGGGGTGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_041330185.1|1015361_1016084_-|acylneuraminate-cytidylyltransferase	unknown	unknown	gnl|CDD|133011
NC_009767.1|WP_012119325.1|1016686_1017889_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase	unknown	unknown	gnl|CDD|274662
NC_009767.1|WP_012119336.1|1032444_1033239_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009767.1|WP_012119326.1|1017885_1018863_-|UDP-N-acetylglucosamine-4,6-dehydratase-(inverting)	unknown	unknown	gnl|CDD|132628
NC_009767.1|WP_157042538.1|1038577_1039561_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042536.1|1023627_1024020_-|four-helix-bundle-protein	unknown	unknown	gnl|CDD|377534
NC_009767.1|WP_012119340.1|1036654_1038574_-|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl|CDD|132152
NC_009767.1|WP_157042535.1|1016205_1016547_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|132626
NC_009767.1|WP_157042775.1|1034530_1035523_-|glycosyltransferase	unknown	unknown	gnl|CDD|133029
NC_009767.1|WP_012119330.1|1024351_1024990_-|N-acetyltransferase	unknown	unknown	gnl|CDD|100048
NC_009767.1|WP_041331588.1|1022095_1023277_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl|CDD|99740
NC_009767.1|WP_012119334.1|1029312_1030881_-|hypothetical-protein	unknown	unknown	gnl|CDD|379080
NC_009767.1|WP_012119342.1|1039641_1040505_-|hypothetical-protein	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012119332.1|1027245_1028283_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_157042774.1|1030953_1032210_-|glycosyltransferase	unknown	unknown	gnl|CDD|340825
NC_009767.1|WP_012119337.1|1033241_1034534_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340825
NC_009767.1|WP_157042537.1|1035527_1036799_-|glycosyltransferase	unknown	unknown	gnl|CDD|133029
NC_009767.1|WP_012119331.1|1025275_1026346_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl|CDD|340819
NC_009767.1|WP_012119322.1|1012392_1013457_-|pseudaminic-acid-synthase	unknown	unknown	gnl|CDD|163337
NC_009767.1|WP_012119323.1|1013453_1014962_-|UDP-2,4-diacetamido-2,4,-6-trideoxy-beta-L-altropyranose-hydrolase	unknown	unknown	gnl|CDD|274663

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_041330185.1|1015361_1016084_-|acylneuraminate-cytidylyltransferase	gnl|CDD|133011	cd02518, GT2_SpsF, SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat. Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.	4.17145e-103
NC_009767.1|WP_012119325.1|1016686_1017889_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase	gnl|CDD|274662	TIGR03588, PseC, UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.	0
NC_009767.1|WP_012119336.1|1032444_1033239_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	3.0765e-18
NC_009767.1|WP_012119326.1|1017885_1018863_-|UDP-N-acetylglucosamine-4,6-dehydratase-(inverting)	gnl|CDD|132628	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase (inverting). This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.	0
NC_009767.1|WP_157042536.1|1023627_1024020_-|four-helix-bundle-protein	gnl|CDD|377534	pfam05635, 23S_rRNA_IVP, 23S rRNA-intervening sequence protein. This family consists of bacterial proteins encoded within an intervening sequence present within some 23S rRNA genes. It folds into an anti-parallel four-helix bundle and forms homopentamers.	6.30823e-28
NC_009767.1|WP_012119340.1|1036654_1038574_-|asparagine-synthase-(glutamine-hydrolyzing)	gnl|CDD|132152	TIGR03108, eps_aminotran_1, exosortase A system-associated amidotransferase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. This model represents a distinct clade among a set of amidotransferases largely annotated (not necessarily accurately) as glutatime-hydrolyzing asparagine synthases. Members of this clade are essentially restricted to the characteristic exopolysaccharide (EPS) regions that contain the exosortase 1 genome (xrtA), in genomes that also have numbers of PEP-CTERM domain (TIGR02595) proteins.	0
NC_009767.1|WP_157042535.1|1016205_1016547_-|methyltransferase-domain-containing-protein	gnl|CDD|132626	TIGR03587, Pse_Me-ase, pseudaminic acid biosynthesis-associated methylase. Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme.	8.37714e-10
NC_009767.1|WP_157042775.1|1034530_1035523_-|glycosyltransferase	gnl|CDD|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.15654e-39
NC_009767.1|WP_012119330.1|1024351_1024990_-|N-acetyltransferase	gnl|CDD|100048	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain. WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity.	2.66328e-59
NC_009767.1|WP_041331588.1|1022095_1023277_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl|CDD|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	2.10028e-160
NC_009767.1|WP_012119334.1|1029312_1030881_-|hypothetical-protein	gnl|CDD|379080	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.	2.30295e-08
NC_009767.1|WP_012119342.1|1039641_1040505_-|hypothetical-protein	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.71801e-11
NC_009767.1|WP_012119332.1|1027245_1028283_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	8.89111e-50
NC_009767.1|WP_157042774.1|1030953_1032210_-|glycosyltransferase	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	7.9879e-29
NC_009767.1|WP_012119337.1|1033241_1034534_-|glycosyltransferase-family-4-protein	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	2.70319e-45
NC_009767.1|WP_157042537.1|1035527_1036799_-|glycosyltransferase	gnl|CDD|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.05171e-43
NC_009767.1|WP_012119331.1|1025275_1026346_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl|CDD|340819	cd03786, GTB_UDP-GlcNAc_2-Epimerase, UDP-N-acetylglucosamine 2-epimerase and similar proteins. Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family (EC 5.1.3.14) are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.13214e-140
NC_009767.1|WP_012119322.1|1012392_1013457_-|pseudaminic-acid-synthase	gnl|CDD|163337	TIGR03586, PseI, pseudaminic acid synthase. Members of this family are included within the larger pfam03102 (NeuB) family. NeuB itself (TIGR03569) is involved in the biosynthesis of neuraminic acid by the condensation of phosphoenolpyruvate (PEP) with N-Acetyl-D-Mannosamine. In an analagous reaction, this enzyme, PseI, condenses PEP with 6-deoxy-beta-L-AltNAc4NAc to generate pseudaminic acid.	0
NC_009767.1|WP_012119323.1|1013453_1014962_-|UDP-2,4-diacetamido-2,4,-6-trideoxy-beta-L-altropyranose-hydrolase	gnl|CDD|274663	TIGR03590, PseG, UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.	3.56958e-61

Protein sequences

>NC_009767.1|WP_012119331.1|1025275_1026346_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MSKPLTIVTIVGARPQFIKAAAVSRVLRARHREVLVHTGQHYDANMSAIFFDELGIPPPDVNLAVGSAGHGAQTGAMLAKIEEVLLAEHPDWVLVYGDTNSTLAGALAAAKLRIPVAHVEAGLRSFNRAMPEEINRVLTDHLSDLLLCPSQTAIDNLAREGITRSVILVGDVMADALRLAAERADTPVLESFGVQPGDYALATVHRAENTDDPLRLQGILIGLTLLDMPVIFPAHPRARRAIAALEWTPPAHVRLVEPVGYLGMVALMRGARVILTDSGGVQKEAYWLGVPCVTLRDETEWVETVAHGWNTLVGADPERIVAAARQPYPTTPHPPLYGDGHAAERCVAALEKGGEG
>NC_009767.1|WP_012119330.1|1024351_1024990_-|N-acetyltransferase
MNIDRLYYAHPTAIIDEPCEIGAGTKIWHFCHVMAGARIGANCVLGQNVLVAGGVIIGNGCKIQNNVSLYTGVELEDFVFCGPSCVFTNVINPRAEINRRAEFLRTLVRRGATIGANATIICGATIGRYAFIGAGAVVRGDVPDYALMLGVPARRCGWMSRHGYRLPEPDADGVMVCPGSGWRYRLVAPEAVQCEDWGEEEALKVKGGQVEG
>NC_009767.1|WP_157042536.1|1023627_1024020_-|four-helix-bundle-protein
MSNEAAGKSISRIERFEDLEAWQQARKLVNTVYNLSDVGAFARDFTLRDQRRRAAVSIMSNIAEGFESRTQSLSIERLGRAKASYGEVRSQLYLAYNRQYVSGEVFEQTLAQAESASRLIHGLIRYTNDL
>NC_009767.1|WP_041331588.1|1022095_1023277_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MPLLDLKAQYIAIRDEIRAAIDRVADAQMFILGPEVEALEREVAAYSGCAYGIGVSSGTDALLVALMAIDIQPGDEVITTPYTFFATAGSIARLGAVPVFVDIDPLTFNIDPAGIEARITPRTRVIMPVHLYGQMADMDPIMEIAQRHNLIVIEDAAQAIGSEYKGRRAGAIGHMGCFSFFPSKNLGGFGDGGMVTTNDAALAERVRLLRGHGAHPKYYHKLIGGNFRLDALQAAVLRVKLKYLDDWTAGRQRNAAIYRRLFSEAGLVTDPPDCLTDGCRARSTGACALPPGKVVLPVKAPERRHIYNQFVIRVSQREKVMATLKARKIGHEIYYPVPLHLQECFAYLGHRPGDLPVSECAAAETLALPIYPELTDEMLEAVVDAVASGVRGE
>NC_009767.1|WP_012119326.1|1017885_1018863_-|UDP-N-acetylglucosamine-4,6-dehydratase-(inverting)
MNWHEVVVLVTGGTGSFGKKFAKIMLEDYQPEKVIIYSRDELKQHEMRIAGFDHPSIRYFIGDVRDLARLRRAMYGVDIVVHAAALKQVPACEYNPIEAVMTNINGARNVIDAAIDMGVKKVVAISTDKAVNPVNLYGATKLCAEKLFIQSNSYSGSTGTRFSCVRYGNVVGSSGSVIPLFREQRRSGRITVTDPRMTRFWITLDQGVRFVIRCIEQMHGGEVFVPKIPSMNIMDLAKAIAPDCVVESIGIRPGEKLHEVLISEDEARHTLELEDMYVVQPRYPWWQVKDWEGGKPLPEGFRYASNTNSQWLSVSELRVLAEDLI
>NC_009767.1|WP_012119325.1|1016686_1017889_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase
MIAASEKLAIDGGVPVRQNPLPYGKQWLEDDDITAVIEVLRSDWLTTGPKVSEFEQEFAGFVDSKEAVAVSSGTAALHAAMHAIGIGPGDEVIVPAMTFAATANCVVFQGGTPVFVDVDPATLLIDPVQVETKITPRTRAVIAVDYAGQPCDYDALRDIADRYKLILVADACHALGGQYKGRPVGSLADISTFSFHPVKHITAGEGGMITTNNPELARRMRTFRNHGIPIDHRQREQQGSWFYEMVELGYNYRLSDIQCALGLSQLRKLPRWLNRRQEIARHYDAAFYGVPVVRPLHVRADVSHAYHLYVIRLDCQQLRTTRTEVFKALRAEGIMVNVHYIPVHLHPYYRQRLGCREGEYPVAESIYNQLISLPIFPAMTDEDVKDVIKAMDKVIAAYRK
>NC_009767.1|WP_157042535.1|1016205_1016547_-|methyltransferase-domain-containing-protein
MTYQRKIWEGDFGKAYTDRNVIDWRTRLPAFRKMLDGLLVEQVCEVGCNRGHNLIALAELIGEPSNIIGVEPNQHALEIARASSVKIGCLYGHAMRSLSLITLMKIYCGNAIF
>NC_009767.1|WP_041330185.1|1015361_1016084_-|acylneuraminate-cytidylyltransferase
MRIVAIVQARTGSTRLPRKVLIELCGEPMLKRVVNRTARSAILHDVIVATTIEQEDETIVELCKKHGWPCFCGSINDVLDRYYKAARDYRVDVIVRITSDCPLIDPCIIDLVISKFLEKNPLDYASNTVQRSFPRGLDVEVVSFEALERAWHEDCNPLWREHVTPYIYLHPEKFALTAVVNNKDYSYMRWTVDTPEDLDFVRRVYDHFGHDNFSWKEVLAVLDEHQDWLAINSHIQQKVI
>NC_009767.1|WP_012119323.1|1013453_1014962_-|UDP-2,4-diacetamido-2,4,-6-trideoxy-beta-L-altropyranose-hydrolase
MMSYLPNLVIRADASTRIGTGHVMRCLALAQAWQDAGGQAIFVMVMDIPALTQRLETEGMHVLRIKAEAGSLDDAAYTIDIARQLGADWLVIDGYHFDSHYQYSIKDAGLKLLCIDDISHLNHYYADIILNQNLHAEDLVYSCESNTRLLLGTKYVLLRREFLRWQKWEREISEVTRNVLVTMGGSDPDNVTSKVIRSLKEVAIDGMEAKIVLGGGNLHLKELRSVVQDLAFPVFLETNVRNMPEVMAWADVAVSAGGITCWELAFMRLPSLIITLTDNQRANNEKLAMVGSFVNLGWHTHISYSELAKEFLSLSAKPETRAKMASLGRNLVDGDGIERTLMHLRCNAFYLRHLKESDGQLLWKWANDPDVRAASFLSNPVEWDYHIQWFQSKLTDNLCQFYIAINDTGNSIGQVRYDIDDREAVISISLDSAFRGKGYGTEVIRKSSQKLFSSSNVEKIHAYVKPDNMASVKAFMKAGFKLSGTTVVKGQEALHFVLARPR
>NC_009767.1|WP_012119322.1|1012392_1013457_-|pseudaminic-acid-synthase
MSTYITIKDRHIGKSSPVYIIAEISANHNQDFDQAVRIVHAAKDAGADAVKLQTYIPDTLTIRSDKECFRIKSGTLWDGRTLYDLYSEAYTPWEWQPKLKTIANEIGIDLFSTAFDPTAVDFLEEMDVPAHKVASFEIVDIPLIEKMARTGKPLIISTGMATLGEIEEAVQSARNAGATQIALLKCTSSYPALPEEMNLRTIPHLAEAFGVPVGISDHTLGIAVPITAVALGACIVEKHLTLSRAIPGPDSSFSLEPHEFSAMVKAIRTVEKALGKVQYGVSGREMGSRVFRRSLFVIKDMKAGEMFSLENVRSIRPGHGLSPKYLDEILGRKAAKDIERGTPLSWDLIDTYKS
>NC_009767.1|WP_012119332.1|1027245_1028283_-|Gfo/Idh/MocA-family-oxidoreductase
MADTSQQSRQTATRRRIPPVAVIGCGYWGKNLVRNFYHLGALAMVCDSTEAGRAAAAQIAPDVPVVASLDEVTAGAVVIATPAVTHYDLARQALETGRDVFVEKPLALTYAQGARLVQIAREQRRILMVGHVLEYHPAVVRLIDMVRSGALGDIYYIYSNRLSLGKVRREENILWSFAPHDIAIILRLLGAMPVQVSAAGGNYIQPNIADVTVTNLLFDNGVRAHIHVSWLHPFKEQRLVVIGSQKMASFDDVAKELVLYDQRVEVREGEPVPVRGAGERVAFDATEPLRLECEAFLRAVLTREPPLTDGESGLRVLRVLQAAQRSLVTNGEPVPLLVETLQDQG
>NC_009767.1|WP_012119334.1|1029312_1030881_-|hypothetical-protein
MDHSISSIKESETTIAQRRAHRIASWSALSIVLLALSLWNLDGPAMWWDEGWTLSVARNWAEQGHYGRLRNGQRARPGLEAAFTTTLPVGMMMRAFGVGLWQGRLFGALCAVAVVLLLAALAARLYDRRVAVATVVAALCMTAFPTIHPLLLGRRVLAEIPMLMYLLVGYLFLWRALVNRWVALFPAALFLALAWVSKAQLSPFLIVSLTMSALVAALMRRWRIAALFTLVAGGTVLGARILQQSVYPILIDAQLPPDPTTGLIETVAIVTAPARRLDAIQNLAIFGLPALCGMLWGTWRLWHDRSAASSGAPVWYTRLTLLALCGSWLAWYLVFSIGWVRYMGPAIIVASIFVADLLANATDGFAIRHSLVSLINLLTLRRWTRTGGAALFGTVLVLWGGTLTAVSVAATYPVRDYSAQRVAQWLNAQPEGTRIETYETELHFLLDQPYTFPPDQVHVALLRRLWEIDDNVLIAYDPMVNDPDFLVEGGTSVAKLYESTLASGRFRLVLEDGPYRVFERVR
>NC_009767.1|WP_157042774.1|1030953_1032210_-|glycosyltransferase
MRVGKTAKYLRQFGHEVRIVTARNLPYPADLPFEVPSEHVIATPWVDVSMPHTLATRLRRHRSGVVALFDKAPAGQMQYTIALRLLDAYRALVAFPDDAIGWFPFGWNAAQRLLKRWRPDVLVASSGPPTSLLIANALHQQYNLPWVGELRDLWTDNHYYSYPMWRRVLETWLERRTLRTAAGLVTVSEPLAHALRLRYNLPTEVVLNGFDPADYPPMRPTRADPQLTIVYTGTIYRINQRAAPLFAALQRLGARAARVRVTVYSHSISGIVAIRSEAQQYGVEHLLDVRDAVPHREALAQQRAADVLLLLLWNDPRERGVYTGKLFEYLGARRPILGIGPADNVAADLIRERRAGMVSADPVEIAGQLTRWLDAKECGGIPDLPASASAGLSREEQTRRLERFLGQVIDRYNISSDT
>NC_009767.1|WP_012119336.1|1032444_1033239_-|class-I-SAM-dependent-methyltransferase
MPQLLDYPTYAWQVWRGARSRGEADLDRCRRADVAGYVDFSRPLTILDLANGRLRPQYAILRAQGHRVVGIDLVNRPVTSWKARAYAVARALYAKRLRLPPAVMRANALVCGDVGRLPFPDATFDLVTSVAAFEHFLDVPAVVAEVARVLKPGGVVWAAIHVFTAPSGGHNLSFAEVPLRHVPPGVDPWDHLRRRQLPFSVPLNEWRIRDYLAVFGRHFEIIRHYCHMREGEHLLTPEIEAELTARGYTRDELTCGAYVIAARR
>NC_009767.1|WP_012119337.1|1033241_1034534_-|glycosyltransferase-family-4-protein
MTAIHRSERRLLMISYYYAPTENPGTRRVGAFVRYLPQYGYRPAVLTTSSYGALADDEERLIFRAPDILDIGRWLARRIKNGQVAATGTSWSPIVTPDSTLSRALNKILIPDIHTGWLPGAVLRGIQVLRAGTFRAIFSSAPPPSAHLTALALKRLSGLPWVADFRDGWTFEPPDPTLLRSVARMRIERALEEAVVRNADQIVTVNQVLADDLRRRHPFVNVTVISNGYDAAEVGTLRPHTKGERLRVVHTGALAHSRSHTNVAGLLAALDNLRQNRSSVLADLEVCFIGNLGAAEQEALTCNGRRRPITIQGPVPHHEALQRQAEADVLLLVTAPNAASVTTSKLFEYLASGRPILALTGRSAAAALIEEFNAGIVVAPDDVDGICRALEWFYERWCSNNLPTRVDPRVQRFERRSLTGELAKIFDTLM
>NC_009767.1|WP_157042775.1|1034530_1035523_-|glycosyltransferase
MRPLLSTVIVNSDGCADTLRCMESLCAHPPDLAALAPRAGALPEHEIILVDNRSRDGCVTLVRERFPAVRILESPARQGFSKNYNLGIRHANGVFVLALNNDTLVHPGALTTLLNAILDTPAYGMVGPRLIGRDGWVQAVCARPVLTPLEYLLTQSIADPGFPIGRLWLLSQQISVARRRSGSVPCISGACMLVRRTAFEQAGLFDEAVDFYYEDIEWCHRMACHGWQVGYVAEATITHLGDQSIRNVKVWAKKSEYFSALRYFRRYHGLTDEGARVLRAATSFGWLMRGIAFVLAEGLFGLKGHARAYLYLWHWILRDPSARPDRVESQ
>NC_009767.1|WP_157042537.1|1035527_1036799_-|glycosyltransferase
MVPPCRACAVAGGTRQRADQPRQAPVGAAAVRGVGGAVCHTGSVEQGMNRPVTVVTVNYNHSHYLPAYLDSLRRSSYPISNMIVVDNDSTDESLALLRSYPDVTVLANQRNIGYSAALNQAIRCAQTNLVCATGPDVVVDANWLGPLVAYYQRNPETIFAVASRVLTMDRMQVQSAGGSLHFCGHLCVYEMWEPVISTDDTTPHEVGAIDSTSALFDREKFLAIGGCDPDFFVYHEEFDYCYRARMRGWTCWYHPGSVVYHGEGSAEFSVRGSGAYPRKRPFLHTRNRLLSVFKNYQMRTIVAILPALLLVELLTLFALWRLGLHGAYGDAARWLWRYRKETALKRTIVQRSRRVDDGRLLSADALTISPALLNSPTMRLAKGALDRMLALYWRGVRGVLYPSRRWYDHRTLRSARDRTDKRR
>NC_009767.1|WP_012119340.1|1036654_1038574_-|asparagine-synthase-(glutamine-hydrolyzing)
MCGICGIATPDLQQPVDAALLRRMNARIIHRGPDSDGFHVESGLGMAMRRLAIIDVRGGHQPIAGEDGQTLVTFNGEIFNFQELRRELEQYGHRFATSSDTEVIVHAYEQWGDDALLRFNGMFAFALWDRRKRRLLLARDGMGKKPLFWWHSSVHGLLWGSEAKCILAAPWVARQVEPLALHHYLTLQYTPDPLTMFQGVFQLPAAHKLVFEAGAAPKIERWRQIAFEPKLNLSDTEAIEQARVLLREAVARRLIAEVPLGAFLSGGIDSSIIVALMAEQMSAPVKTFSIGFDEPLFSETRYARAVAERYATDHHEFIFRPADLTATIEAVVEACDEPLADPAALPLFELSRQTRRHVTVALCGDGGDETLAGYRRYALDGLLRPYAALPAWITRRAVPAAVGWLPDPTWIPEDRSPITGLKRLAQWSATTPKASLVRWGSYFSHDDKLALYTDRWRDAFANVDTADLIAAAYDNARAASHLDRTLHADHVTYLAGDLLPKTDRMSMAHAVEVRAPLLDDWWVAWTARLPERFKVRGTQTKWLLKAAFGDKLPPEVAARGKQGFSVPVGQWLRGELRAWARERLLGNPALREWFRPAALAQLLAEHDSGRINHGKRLWALLLFGVWVERYVIQEVWNKA
>NC_009767.1|WP_157042538.1|1038577_1039561_-|hypothetical-protein
MIRSTFCEASHRRVWISCLIGALSAIVLIRLHPNHIDGILVDMGWAFNAARDLWEGRDPYRHEPSMMLVPYPLTAAIVIFPWAFFPGIWGLVLLFGIGSACLAYILIRDNQYWRLIVFVSPAYFMALKSIQWSPFFMLALFLPVFAPVLLAKPTIAFPVALSIKWTPIRLIMTTLIGIIPFILIPDWFWRWIDQSRHYGGFIPILSWFGPIFLVSIFFYRNYKTRFFFLMSMTPQHLFFYDQLLLWVIPKTRQQMLILTVSSWIGFLYILMNFETLWVNEVYLLTTTYLPAFFIVLWQEPAVHKRFHAIFMILLNKHDRFAFDRTKE
>NC_009767.1|WP_012119342.1|1039641_1040505_-|hypothetical-protein
MTTPVTMPEVDPAQPPPPEYLPDYDRFITEDDAPVDNFFSEKQQRLLTEPLYSADVAARLGRPLLAAANVGIFFGEGEPAIVPDALLSLDVRLADDLWPKPNRSYFIWRFAKPPDVVVEIVSNREGGELDRKRTRYAQLGVGYCLVFDPQRLLGTELLRCYELRGRTYTPCDSPILRDVGLGARLWDGEYEGVQAVWLRWCDRDGHLIPTGAELAAQERQRAEAERQRAEAEQQRAEVERQRAEAEQQRAEAERQRAEAERQRAERLAARLRALGIDPDADMPEIHQ

Crispr_ID: NC_009767_24

• CRISPR_ID: NC_009767_24
• CRISPR_location: 1214126-1214234
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_24

Consensus_repeat	Method
GGCATCTTCAATCGTCATTGGTATACGATCGTGAAAGC	CRISPRCasFinder

spacers of NC_009767_24

>24.1|1214164|33|NC_009767|CRISPRCasFinder
ACCACGACACTGGGGCTTCACCAGATGCAACCG

CRISPR arrays and Neighbor proteins around NC_009767_24

CRISPR arrays

The CRISPR arrays of NC_009767_24

>merge|NC_009767|24|1214126-1214234|CRISPRCasFinder
GGCATCTTCAATCGTCATTGGTATACGATCGTGAAAGCACCACGACACTGGGGCTTCACCAGATGCAACCGGGCATCCTCAATCGTCATTGGTATACGATCGTGAAAGC

>NC_009767|24|21|1214126-1214234|CRISPRCasFinder
GGCATCTTCAATCGTCATTGGTATACGATCGTGAAAGC	ACCACGACACTGGGGCTTCACCAGATGCAACCG
GGCATCCTCAATCGTCATTGGTATACGATCGTGAAAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119456.1|1195113_1196340_+|2-methylfumaryl-CoA-isomerase	unknown	unknown	gnl|CDD|211976
NC_009767.1|WP_012119469.1|1216973_1218428_+|aspartate-ammonia-lyase	unknown	unknown	gnl|CDD|237031
NC_009767.1|WP_012119473.1|1226040_1234671_+|hypothetical-protein	unknown	unknown	gnl|CDD|380149
NC_009767.1|WP_041330219.1|1220098_1221202_+|chromosome-partitioning-protein	unknown	unknown	gnl|CDD|349755
NC_009767.1|WP_012119472.1|1223083_1224442_+|hypothetical-protein	unknown	unknown	gnl|CDD|379252
NC_009767.1|WP_012119465.1|1206752_1209368_-|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl|CDD|274529
NC_009767.1|WP_012119464.1|1203565_1206310_+|beta-glucosidase	unknown	unknown	gnl|CDD|224389
NC_009767.1|WP_157042548.1|1221496_1222993_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274350
NC_009767.1|WP_012119457.1|1196349_1197393_+|CoA-ester-lyase	unknown	unknown	gnl|CDD|225184
NC_009767.1|WP_157042549.1|1234833_1235592_+|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl|CDD|378429
NC_009767.1|WP_012119466.1|1209718_1212046_+|family-78-glycoside-hydrolase-catalytic-domain	unknown	unknown	gnl|CDD|379971
NC_009767.1|WP_157042547.1|1219201_1219387_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119463.1|1202519_1203347_-|YceI-family-protein	unknown	unknown	gnl|CDD|377274
NC_009767.1|WP_012119458.1|1197408_1198467_+|MaoC-family-dehydratase	unknown	unknown	gnl|CDD|239535
NC_009767.1|WP_012119461.1|1199933_1201121_+|amidohydrolase/deacetylase-family-metallohydrolase	unknown	unknown	gnl|CDD|236423
NC_009767.1|WP_012119459.1|1198487_1199297_-|enoyl-CoA-hydratase	unknown	unknown	gnl|CDD|181249
NC_009767.1|WP_012119468.1|1215773_1216775_-|class-II-fructose-bisphosphatase	unknown	unknown	gnl|CDD|236536
NC_009767.1|WP_157042781.1|1214352_1215741_-|hypothetical-protein	unknown	unknown	gnl|CDD|377781
NC_009767.1|WP_041331649.1|1201203_1202169_+|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl|CDD|187570
NC_009767.1|WP_157042546.1|1218577_1218763_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119456.1|1195113_1196340_+|2-methylfumaryl-CoA-isomerase	gnl|CDD|211976	TIGR04253, mesacon_CoA_iso, mesaconyl-CoA isomerase. Members of this protein family belong by homology to the family of CoA transferases. However, the characterized member from Chloroflexus aurantiacus appears to perform an intramolecular transfer, making it an isomerase. The enzyme converts mesaconyl-C1-CoA to mesaconyl-C4-CoA as part of the bicyclic 3-hydroxyproprionate pathway for carbon fixation.	0
NC_009767.1|WP_012119469.1|1216973_1218428_+|aspartate-ammonia-lyase	gnl|CDD|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0
NC_009767.1|WP_012119473.1|1226040_1234671_+|hypothetical-protein	gnl|CDD|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	2.96089e-29
NC_009767.1|WP_041330219.1|1220098_1221202_+|chromosome-partitioning-protein	gnl|CDD|349755	cd02035, ArsA, Arsenical pump-driving ATPase ArsA. ArsA ATPase functions as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes, respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.	2.36338e-22
NC_009767.1|WP_012119465.1|1206752_1209368_-|ATP-dependent-chaperone-ClpB	gnl|CDD|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NC_009767.1|WP_012119464.1|1203565_1206310_+|beta-glucosidase	gnl|CDD|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	9.64873e-80
NC_009767.1|WP_157042548.1|1221496_1222993_-|tetratricopeptide-repeat-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.88954e-10
NC_009767.1|WP_012119457.1|1196349_1197393_+|CoA-ester-lyase	gnl|CDD|225184	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism].	9.3855e-67
NC_009767.1|WP_157042549.1|1234833_1235592_+|carboxypeptidase-regulatory-like-domain-containing-protein	gnl|CDD|378429	pfam10411, DsbC_N, Disulfide bond isomerase protein N-terminus. This is the N-terminal domain of the disulfide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerization. DsbC is required for disulfide bond formation and functions as a disulfide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity.	0.000416019
NC_009767.1|WP_012119466.1|1209718_1212046_+|family-78-glycoside-hydrolase-catalytic-domain	gnl|CDD|379971	pfam17389, Bac_rhamnosid6H, Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.	6.15142e-14
NC_009767.1|WP_012119472.1|1223083_1224442_+|hypothetical-protein	gnl|CDD|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.60291e-25
NC_009767.1|WP_012119463.1|1202519_1203347_-|YceI-family-protein	gnl|CDD|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	3.26489e-26
NC_009767.1|WP_012119458.1|1197408_1198467_+|MaoC-family-dehydratase	gnl|CDD|239535	cd03451, FkbR2, FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.	8.53662e-58
NC_009767.1|WP_012119461.1|1199933_1201121_+|amidohydrolase/deacetylase-family-metallohydrolase	gnl|CDD|236423	PRK09237, PRK09237, amidohydrolase/deacetylase family metallohydrolase.	0
NC_009767.1|WP_012119459.1|1198487_1199297_-|enoyl-CoA-hydratase	gnl|CDD|181249	PRK08139, PRK08139, enoyl-CoA hydratase; Validated.	3.5944e-151
NC_009767.1|WP_012119468.1|1215773_1216775_-|class-II-fructose-bisphosphatase	gnl|CDD|236536	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed.	2.91637e-138
NC_009767.1|WP_157042781.1|1214352_1215741_-|hypothetical-protein	gnl|CDD|377781	pfam07143, CrtC, CrtC N-terminal lipocalin domain. This family contains the members of the old Pfam family DUF2006. Structural characterization of family member NE1406 (from DUF2006 now merged into this family) has revealed a lipocalin-like fold with domain duplication.	2.48137e-08
NC_009767.1|WP_041331649.1|1201203_1202169_+|GDP-mannose-4,6-dehydratase	gnl|CDD|187570	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs. GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	4.79478e-121

Protein sequences

>NC_009767.1|WP_012119466.1|1209718_1212046_+|family-78-glycoside-hydrolase-catalytic-domain
MSTQQSPVWIRLPQCAETPVVAAYRLHVHIEQDSVARVRVSADERYELWLDGHRIGRGPERGVPDMWFYDMYDLSLRAGRHVLTARVWRLKELAPLAQMSVAPGFVLWADAPFRHLLSTGIAQWEVKLLTGYSFFLPGATSYSPWFSGANQVIDGASFDWEALNGDGDGWEPAAHRMEGRALLFGIQPEHALTPGPLPAQCSIPRTAGIVRWVSAGAWENPEIVAVLPDNRMDEERDHWQALAAGQAPFILPPHERRQVIFDLTDYVCAYPQIVVSGGSGSVLTIGWAEALFWDLKGQRKERRDQIEDRYFVSLMRDVFRSDGGAERVFTTLWWRAGRYLHLLVETADEPLTIESFTLTETRYPLEMESRLTLDDERLSRALPLMVRALQMCSHETYLDCPYYEQMMYVGDARLEALTTYAISRDDRLARKALMLFDHSRQASGMVLARFPCCDRQIIPPFALWWVAMIHDYAMWRGDQAFIAGLLPGMRAVLDGFLRLIDSDGLLPSPSGWNFVDWVPAWRHGVPPDGDRGVSGVLNWHLAYTLRLAAELEQWAGEAELAQRYERHRTRLAARLIACFWNDARGLFADDLEHTSFSEHTQALAVLSGALDPQQQQRIAERLRNDRHLTRTTIFFTHYLFEAYYILGMADAFFERLDVWLSLPDEGFKTTPEQPEPTRSDCHGWGAHPLYHCFATILGIRPASFGFDHVVIAPMPGHLSAVSGALAHPRGMIDVTITQINGRMTIDINLPEGLTGTFRYGHVVQELTAGAHRWCA
>NC_009767.1|WP_012119465.1|1206752_1209368_-|ATP-dependent-chaperone-ClpB
MTFNTNRLTQKSEEALLSAQSMAERNGNSQIEPEHLLLALLEQTDGVVPQVLTKLNVAVGALVQQLRAEINKFPRVSGGGVQLQYSPRMRTVVVRAADEMPQFGDEYISTEHLLLSILQHAGGGAERVLRQAGITREKLLQALREVRGSQRVTSPTPEGTYAALEQYGRDLTELARRGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVREDVPEALKNKRIIALDMGALIAGAKYRGEFEERLKAVLKEIQERDDVILFVDELHTVVGAGAAEGAMDASNMLKPMLARGELHMVGATTLDEYRKHIEKDAALERRFQPVMVDPPSVEDTISILRGLKERYETHHGVRITDAAIVAAATLSDRYISDRFLPDKAIDLIDEAAARLRMEITSDPQELDDLKRRIMQLEIEREALKKEKDKASKERLEKLEQELANLQEQRRAVEAQLQREREQLTRVQQLKEQIDQTRVEIERAQRVYDYNKAAELQYGRLNTLERQLAEIEEQIRASGGGMLRQEVTEQDIAEIVSKWTGVPVSKLLEGEIEKLVHMEERLHQRVVGQDEAVSAVANAVRRARAGLQDPNRPLGSFLFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQILDDGRLTDGHGRVVNFKNTVIIMTSNIASPTIQELAQRGASQDIIRASVMEELRTQLRPEFLNRIDEIIVFKPLSREQIGQIVEIQLNRLRRLLADRKISLELSPAAREKLVAEGYDPVFGARPLKRVIQQRIQNPLALHLLQGEFRDGDTILIDVAPDGSLAFERIVVGEVVSP
>NC_009767.1|WP_012119464.1|1203565_1206310_+|beta-glucosidase
MTDTGVALTNDVEARIEALLRQMTLAEKVALMAGSSMWTTTPIERLGIPAIKVTDGPNGARGAGGFVGGAVTAACFPVGIALAATWNSRLVEEVGEALAEEAQSKGARLLLAPTVNIHRSPLNGRNFECYSEDPYLSARMAVAYITGLQRRGVGATIKHYVCNDSEFERNTISSEVDERTLREIYLPPFRAAVQEAKTWAVMAAYNRVNGVYASEHPVLLNDILKREWGFDGIVMSDWFGTKSVVEAAANGLDLEMPGPTRWRGERLVAAVENGQVRMEAIDESACRILRTIARAGAFETPEIPPEQAIDRPEHRALIRRAAAESMVLLKNDGGILPLNLANLSSIAIIGPNAKTAQIMGGGSAQVNAHYAISPYDGIAARVGGQVILEYEIGCTNHRHLPRFDSRLVTPESGEGRGFTVAYYNTHDLSGEPVHQAATESSEQVWLGEVAPGVDPRQFSARFTARFTPAERGTHTFSLISAGLSRLFVDDVLIIDNWTTQTRGDAFFGAGSAEATAPMTLEAGRTYALRLEYSNQGATMLAAVRLGYLPPVAEDAIERAAALAAQSDVALVFVGLNADWESEGYDRPHMDLVGRQDELVERVAAANPRTIVVLQTGSPVTMPWLDRVAAVLQAWYPGQECGNAIADVLFGDVNPSGRLPQTFPVRLEDNPAYINYPGENGRVRYGEGIFVGYRYYEKKKVAPLFPFGFGLSYTTFRYDNLRLSADVIAPDDRLTAQIDITNTGMVAGQEVVQLYVRDSAARVARPAKELKGFVKVALQPGETQTVTFSLDREALAYWDDVQHAWVAEAGEFEVLVGSSSQDIRARAVFHLNDTVAFGGPTKSPVQLSVDSPVKALIEHDGARAVLERHMPGFVEQAGVGVMMGLTLAQMAAFAADRITPELLGAIAADLARIQA
>NC_009767.1|WP_012119463.1|1202519_1203347_-|YceI-family-protein
MNRNRLFLGAAAALIVLIAGFWIFDSVLGDTQPASGPMTAIPINAQPTSAPEPTTAPADPAPATPTETAPVATASPAPVAPTEAPTAPPAGVAPNQVIRYQIVADESKVSFRIAEDLRGQRIEAIGTTNQVAGEFAINPSDLTTAQIGVIQVNARTFATDSGNRDRAIRNFILNTDQYEFITFTPTAIEGLSGSGALNEPFTFTIRGDLTIRDITRPVAFEATVRAESAERLVGVATTTVKRSDYNLQIPSVPFVANVSDDVVLTIEFVALAAAQ
>NC_009767.1|WP_041331649.1|1201203_1202169_+|GDP-mannose-4,6-dehydratase
MRVFITGITGPVGSALADYLVALPGVEVHAFKRWRSDTRPIAHLAGRITLHEGDIEDPYSVMRAVERAAPDRVYHLAAQSYPSESWDAPIVTMRTNVEGTINVLEAVRRHAPRARVHLAGTSAEYGWVQPEDTPIPETHPTRPLSPYGVSKVAAGLSGLQYAANYGMHVVVTRSFNHVGPHQGDRCAIQTFCRQMALIEYDRQEPVIYVGNLEARRDFTHTRDVARALWLLLDHGAPGEIYNLCSGVATRIGDIVAMVQQHGRVPTEVRVDPARLRPSDEPLLVGDNTKLRQTTGWQPQITVPMIVEELMAYWRERLASGG
>NC_009767.1|WP_012119461.1|1199933_1201121_+|amidohydrolase/deacetylase-family-metallohydrolase
MDDLLIRGGHVIDPANDLDAPADVAIRDGRIAAVAPALDPAQALHVIDASGQIVTPGLVDLHTHFYWGATYWGIEADPVAARSGVTTWVDAGSAGAYSFPGFREFICAASRVRTFAFLNLSAIGLIAPTWEFANLDYCDVDLAIRTVEENRDIIVGIKARIDHNTTRGVGIRPLHLARALADRVALPLMVHIGNGPPPIDEIVALLRPGDILTHCFTGGTHRLLLKDGRLSPIARELQQRGVLLDIGHGTGSFSYRTAEAALQEGVLPDIISSDIHQLSVQGPMFDLPTTLSKFLDLGLTLPDVIDRATRRPALAIGKPELGTLHPGSPGDVALFRVEEGDYTFFDVEMNARRGNRRLTCTATIVGGTLLPRLPERPPAIWAILPDHQRRILVRE
>NC_009767.1|WP_012119459.1|1198487_1199297_-|enoyl-CoA-hydratase
MQVAETLPATEPYVIADRDARGVVRLTLNRPRQFNALSEEMLAALQAELDAVAADPQARVVIIAGQGKAFCAGHDLKQMRANSSQEYYEELFARCSQVMLTIQRLPQPVIARVHGIATAAGCQLVAMCDLAVAAEEATFAVSGINVGLFCSTPGVALSRNIGRKAAFEMLVTGEFIDAHTAQALGLVNRVVPATDLDAEVQRLTDAIVARPAEAIAIGKSLFYRQIEMGIADAYRLAGETMACNMMEPCAQEGIDAFIEKRRPVWAPDK
>NC_009767.1|WP_012119458.1|1197408_1198467_+|MaoC-family-dehydratase
MSVKTNPGNFFEDFRLGQEIVHATPRTVTEGDVALYTSLYGSRFALTSSTPFAQTLGLERAPIDSLLVFHIVFGKTVPDISLNAIANLGYAGGRFGVTVYPGDTLSTTSTVIGLRQNKDGKTGVVYVHSVGVNQRNEIVLEYTRWVMVRKRDLNAPAPETIVPTLPESVPVTDLTVPYRLQPGQYDLARAGSSYLWEDYEVGEKIDHVDGVTIEEAEHMQATRLYQNTARVHFNLHVEKEGRFGRRIVYGGHIISLARALSFNGLANALSIAAINSGRHTNPSFAGDTIYAWSEILDKMEIPGRADIGALRVRTVAAKDRSCHDFPYQNADGTYDPAVVLDFDYTVLMPRRM
>NC_009767.1|WP_012119457.1|1196349_1197393_+|CoA-ester-lyase
MKLPIHFYKPLAAGAPQPIRELPVRPERVIHFFPPHVEKIRARIPEVAKQVDVLCGNLEDAIPIDAKEAARAGFIEVARNTDFGDTALWVRVNALNSPWVLDDIADIVATVGNKLDVMMIPKVEGPWDIHFVDQYLALLEAKHQIQKPILIHALLETAQGMMNLEAIAGASPRMHGFSLGPADLAASRGMKTTRVGGGHPFYGVLADPQEGQEHRPFYQQDLWHYTIARMVDVAVAHGLRAFYGPFGDIKDEAACEAQFRNAFLLGCTGAWSLAPNQIPIAKRVFSPDVNEVLFAKRILDAMPDGSGVAMIDGKMQDDATWKQAKVIVDLARMIAKKDPELAQAYGF
>NC_009767.1|WP_012119456.1|1195113_1196340_+|2-methylfumaryl-CoA-isomerase
MNGILSGMRIVEGSAFVAAPLGGMTLAQLGADVIRFDPIGGGLDYKRWPVTLDGKHSLFWAGLNKGKRSIAIDIRHPRGQELLTQLICAPGDEAGLFITNFPARGWLSYEALKAHRADLIMVNLLGRRDGGSEVDYTVNPQLGLPFMTGPFTSPEVVNHVLPAWDIVTGQMIALGLLAAERHRRRTGEGQLVKLALKDVGLAMIGHLGMIAEVMINDADRPKQGNYLYGAFGRDFETLDGKRVMVVGLTDLQWKALGKATGLTDAFNALGARLGLDMNDEGNRFRARREIAALLEPWFHARTFAEVRRVFEEHRVTWGPYRTVREAIAQDPDCSTENPMFTMVEQPGIGTYLMPASPLDFSRMPRLPAQRAPRLGEHTDEILLEVLGLSDGEVGKLHDEGIVAGPEEE
>NC_009767.1|WP_157042781.1|1214352_1215741_-|hypothetical-protein
MMINAGVRRQEWRSYPYLLVPDDPQLRFPQAEGYQDMASDTYYASGIVQGEQTGKRYAFFVIFARLSGFSSASGIDMHLGALFDLANGGYTTFASYDLPPKRWFRQRLTITRGHLGVAWNSPCWKSRFWARYDASGDLVPFGYTLDVCGRDSRGDPLALDLVVDAVKPPQPVGGPVHNGAITVMGQPNTRSYFQSLSYRGSLRWRGVEEAVWGDIGWLDRQWFPEYVGAYSGILADRYSHQWAQMSFDNGWELSLWRNFARHERNREIPFSGLTITDPEGRTSFTDAYRIEALSYCRDEGYVTPLYAPVQRLFGVRGDRRYFLDAYRFHVPSLDLIVTSTPLAPAPAHRMPVDYLTGPTRLEGTMAGRPVTGYGFNERTLGLWRPWELCQALADSLRPLVDEGKAPSTLVQAIDDARLAIDTKRTNEARRILDRQVRPALDTLPESQCQRLIRLGNDLAAML
>NC_009767.1|WP_012119468.1|1215773_1216775_-|class-II-fructose-bisphosphatase
MSVTQLSRNTGLDLVRATEAAAISAGRWMGLGRRNEANAAAEHAMAATLDLLDFDGWIVVGEEGRLKSPSGLISGRHVGRGGPPVDVVVDPVDGLRLLVQGRSGAIAVAAVAPRGALWSPAPAAYMEKLVVSRETAHALVPECLGAPAGWTLALIARTLGKEIRDLVVFVLDRPRHVDLVNEIRAAGARVMLADDGDIAGAVLAAMPGGPVDVLMGIGGAAEGIIAACAVRSLGGAMLARLAPQSAAEHHAIEERGLDIRRVLTCNDMVATNEVFFVATGITDGLLLHGVRYQRDRAETNSLILRCETRTRRVIYAEHLLPDVDAVLSKEREP
>NC_009767.1|WP_012119469.1|1216973_1218428_+|aspartate-ammonia-lyase
MTEGFRIEKDSLGEVQVPANALYGAQTQRAVMNFPVSGMRPYPAFVWAQAMIKRAAAEVNRDLGLFNDVTVGDRAISGRQIADAIIQAADEVLDGQHADQFVVDPFQAGAGTSHNMNLNEVIANRANQILGFAIDDPKKPVSPNDHVNMAQSTNDTIPTAIRLGCLWRIDELLAAIDRLADALEAKAEEFDPIVKSGRTHLQDAVPVRLGQEFGAYALAVRNDRERIAVAADRLRRLGIGGTAVGSGLNAHPEYHLRMVKRLSELTGQELRSAGNLFEAMQSMADPADFSASLRTLSITLTRIANDLRLLASGPTTGLDEIRLPAVQPGSSIMPGKVNPVLAEMLNMACFHVQGCDLTVSLAAQAGQLELNVMMPIIAHNLFEMMHVLIGAINAFTEKCVVGITANPAKATGWLAKNPILVTALNPVIGYLNGAAVAKEALATGKTIKEVVVEKGLMSAEQVDELLDVRAMTEGGIMGFGGGGG
>NC_009767.1|WP_157042546.1|1218577_1218763_-|hypothetical-protein
MRPVRDRRYPPPPPNPMMPPSVIARTSKIKKITQYSWALRAEALAEIVEAPEGLPRPERGL
>NC_009767.1|WP_157042547.1|1219201_1219387_-|hypothetical-protein
MRPVRDRRYPPPPPNPMMPPSVIARTSKIKKITQYSWALRAEALAEIVKAPPGLPRPERGL
>NC_009767.1|WP_041330219.1|1220098_1221202_+|chromosome-partitioning-protein
MVKLLVYTGSPGAGISMAAAAEAARAADAGKRTLLLTYGSTAGLGALLGVAIGSVPVEVAPRLNALALDARSELAAAWEETRATLLPPFSNLAGDELPQPPASDAAFALLRIRDLAPNYDRVVVDAGPHDPLIEALGVPDNLRWIARLLIGLDGQPAQGSLLPGLLLPPEFVSNLRRVLVEAERLRNLLDAPASMVCYVLRPDAAALAEARLAIPAIQLHGVAVGALVAGPLLPPNPEDARLAPLERLQAALLDEAAAIWSARPLLRLDMSATAGGHMPLLLAGRAMGDAGAVTVRSPIGNDYRGEPALTFELPGLPQGAIGLTLSGDDLIVRVGSYRRHVPLPSRLRGVRAVRATREGDLLVVRRR
>NC_009767.1|WP_157042548.1|1221496_1222993_-|tetratricopeptide-repeat-protein
MVLKPVKFHRIQFIQILLILAATLLAARLAFHPDPRDALRQADALFVAGRHYEAFHAYHALATRAPGFAPARLRLGMALTVRGESAAASREFGWALRLGLNEADTALARLYQGRLAADMGYADEASRMWMQIPTSSALYSLRLALEAEERLSQNDYAGAESGYRAALAVGLPDTWRRTAHARIAALIAGSDLSGAWNEARMAVTKEGRLHPIEQPLATPLRPLPRPDVAQIAAILASDEAIRPQLLGQIYLDVGWTRLAEEQFAIARERGSLTQAAEAYSAYAQLLNGDVGVALARLHDLALAAPDDPRPRILLALGRLAVHDAQAALTELQEARRLAPNDPDVLLALGEWHTAQRDYPAAAAAYAEALRVAPAAMRGAYALALAQYHLKTSLQICEKGLPAATEAVARLPKNAQSWSALAHARLACGDIAGARDAAALAQTLDPASAEAAYHYGRALAALGDRTAARTALIRAADLAPASEWRIRAEEQMAMWGMAP
>NC_009767.1|WP_012119472.1|1223083_1224442_+|hypothetical-protein
MRNLPRAIIPVLRKFELLFSERVWEWAKILLIGAILAPGKRTVTSALRVMGLSDDAQFQNYHRVLNRAVWSPYAASRILLRLLVDAFVPSDTAIVLGLDDHIERRRGAKIKAKGIYRDPVRSSRSFFVKTSGLRWLCLMLLAPIPWAQRVWALPFLTVLAPSERCHQELGKRHKQLTDWARQIIFQVRQWLPERVLVVVADSSYAALELLAACQGLPNPVTVVTRLRLDAALYDTAYVHPAGRPGRPRKKGARQPTLEQRLSDPTTDWQHTSVRWYGGTTRTVRLASATAVWYHSGLPPVSIRWVLITDPDGKFEAQALLSTNPAATPKEIVEWFVMRWQVEVTFEEARAHLGIETQRQWSDLAILRTTPVLLGLFSLVTLFAHHLLQAGELPVRQAAWYTKALPTFSDTLAFVRKQLWPVTISWMSPAEADMVKIPKSLLVRLTDALAYAA
>NC_009767.1|WP_012119473.1|1226040_1234671_+|hypothetical-protein
MATTHTSHRARRLHMRRWAVISAAALMLSTLLAFFGARVASAVGDLTVRVYADSNRNGQYDGGEPAVSGVPVSVFNTDNNLLYSVNTNASGLAIFPNTPNGDYRVEVTNPNNGLPNGTVVSVPGPTTPGQDNALVFFVNINNAPVQRDVGLRSLDASGIDAGAPAGFRTIVVRAWDDQDANGIQDAGEPGLSGLTLGLYTPSNVLVATATAGPDGTYRFVDNVPAGVSNYTIRVTGGIPAGWVLTTPNANFDSEDRRDSDAQLVVGEPRITVPNAARGVNDDSLDVGFARGAVSGFVWRDLDQNGLRDPGEPFINGVEVELRDSSDNLIDTQTTRSILNDPANRAGFFEFVSVPLTATYRVRIPNDEFNAATDPLYGHATPPNQTATPPAIGDQGLINGTTDGPAVIGASDFLQTPNFTLDATNRRNETSNFGLYAGTVGDFVWHDVNRNGSVDPLETTLGLANALVFVDLDSDCQIDTGEPQMTTDLYGNYRFDSLPLGITYTVVLDASNFAPGGALEGLGYTTGAPCGSTEGVVITTTLLTASQPTDFTVDFGIVRAEIGNFVWEDDNGNGIFDLSETGIQSVTVQLYGAGPDNTFFTVDDVTIGLSQTTNASGIYTITDILSGTYYATFDLSALPPAYVASIVTPTGWLSVDPPASSSDDVNDVRALVSGRVWRTPTFTIARGSQNPGVDAAVYRPASLSGRVFFDQNGNNQDETSPEPGLSNFTVNLLRAADNTLMMTTTTLADGSYAFSSVAPLTYVVEIVRPDPSNWSFVAPDNPSAGDPLASDVDANGRTSVLTVTSGITVTDVDAGLRGNNIVQGYVFFDRDGSFTQTANDQALNSATATLTVTVATVNLTTTYTLTATTTGSDPNYSFAGLPGGTAGVTYTLAFAPPDGTYTASLADVGGNDALDSDGPFIAVTGATVGVSNTLDYDQGYWRPVTVRARIFDEITALPPDNVYNVGDTGITTATVTITTTNGAVTPLGSSGIDSTGVVTFTLPPTTTTYWLNVPTPAGFTPSPGNTGALEVNTPSPLLADNTAPSPTTEFQFGYFRPGAVTGAVRFDRDADNNLFGDSEPGMQGVTVTLRLGGSDVLTTTTDATGAYTFTNVAPANGYSVWVINPDTANFLLVTPTGGDNDMQSTDGGNTYAETNPFTVTSGAVVSGSSDAAVRGRSTVNGAVWEDLNGNGVRDGGEGVGALPGVTVNLTVTVNLPGLLSTQIVTTTTTDASGAYTVTNLPGWASVSSEVSFTLRFATPTGWYETLADVGTQPATDDSDGIGAGVDQLDDQGLQRNTTATRDRGYYQGVTVVARVFEENPPVDNAFATGDTGITTATVTITTTNGTVTPLSVTPIDASGLITFTLVPTDSATPYWVNVAPISGFTRSPGNTGAAQVTPNPTSGQTVGPTNLEFGHYRPVTVVVRVFEEVNPPVDNAFATGDTGITTATVTITTTNGTVTPLSVTPIDASGLITFTLVPTDSATPYWVNVAPISGFTRSPGNTGAAQVIPNPTSGQTVGPTNLEFGHYRPVTVVARVFEEVNLPVDNAFATGDTGITTATVTITTTNGTVTPLSVTPIDASGLITFTLVPTDSATPYWVNVAPISGFTRSPGNTGAAQVIPNPTSGQTVGPTNLEFGHYRPVTVVARVFEEVNLPVDNAFATGDTGITTATVTITTTNGTVTPLSVTPIDASGLITFTLVPTDSATPYWVNVAPISGFTRSPGNTGAAQVIPNPTSGQTVGPSGLEFGHYRPVTVVARVFEENPPVDNVFATGDTGITTATVAITTTNGTVTPLSVTPIDASGLITFTLVPTDSATPYWVNVTTPAGFTPSPGNTGAAQVTPNPGPGGTVGPTNLEFGYYRPGAVTGAVRFDRDADNNLFGDSEPGMQGVTVTLRLGGSDVLTTTTDATGAYTFTNVAPANGYSVRVINPDTANFLLVTPTGGDNDMQSTDGGNTYAETNPFTVTSGAVVSGSSDAAVRGRSTVNGAVWEDLNGNGVRDGGEGVGALPGVTVNLTVTVNLPGLLSTQIVTTTTTDASGAYTVTNLPGWASVSSEVSFTLRFATPTGWYETLADVGPQPANNDSDGIGAGADQLDDQGLQRNTTATRDRGYYRPVVIQVRVFEETTSPIDNAYAAGDAPVPGATVALTPNVTLGGPFGPDATGIISYTVAPTTTAYTVGVTPPTGYVASPGNTGTATAPAPLTSGQSIMPLPFGYYRNGVISGTVWFDTNSNGLFDSGEPTMAGVTVTLTLDPDTTVNGNETSIGTFTTGDNGIYQFTAITPTGALTSGTLYRVQFALPAGYAFTAQGAPVTTDNNSDASTVNGYTDRFTVGSNETVTYVDAGAVGNLSLSGTTWEDIDADGVFDAGESPLSGVTLTLTVTSSINSTNPVVTYTVTSGAGSPNFTFNQLPAGNYQLSVTGRPLGYLLSTTGTLSGTLPATGQNFGLYRTASVGDRVWLDVNGNGAYEAGVDAGVPGIAVRLRDAATDTVISTTTTLASGDVGFYGFENVTPGSYVVEFVVPTGFQTVNNGTGSLSVDNDNDAQNNGRTASFTLASSQISTTVDAGLIGSGSISGIAWVDENFNDVRDPGETQRIAGVAVTLTITPTGLGAPLTFNAVTATNGSYAFGNLPPGTFVLTFTKPAGYFDIATRVGSDPTIDSDAPVATGTLGAGQSITTLDAGYRMQTRVFLPLIAVPVTPPDLVVEEFTVTPAKTSYAAGEPVLITVKVKNVGGSPTTIGFWVDLYINPSVAPTTPNVRWNDVCGISPCYGIAWYVNQSLAPGQSITLTSAPGQFAGPQSVWPGSFAGGTNTLYVYVDSYNPPVPTGAVVESNETNNRAQITGFVVTGASLSNGAGPGTPSSTPDAPVALPPRQLPGPVER
>NC_009767.1|WP_157042549.1|1234833_1235592_+|carboxypeptidase-regulatory-like-domain-containing-protein
MRRQHLSPSFLICGVLLLMVGLSAMLPGAARAQQDPVPAPSPRPAIQFTEQSSGGGSSAPDRSAIPGHIGGTVIDVVSSAPVPGMPVRIGDNVVFTDQDGNYGIWVSPGTYLVNVAPAPEQGTVVDGPAAVVVEPETSVIQHLRVALPVPDVKAVEPPVEAPVEAPVEAPRRLPRTNDPSDVTWVWVSFGILLIGAGIGLGMLPAGRRALATSAAGIAHLSNQALLQKLLSERPSRSTKDDALLRELLESQE

Crispr_ID: NC_009767_25

• CRISPR_ID: NC_009767_25
• CRISPR_location: 1249931-1250043
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_25

Consensus_repeat	Method
TCCGCGACAGCGGACTGGCCAGGGCATCTGCCCGCGACG	CRISPRCasFinder

spacers of NC_009767_25

>25.1|1249970|35|NC_009767|CRISPRCasFinder
CTGCCAGGTGCAATGCTTCAATGTCTCTTGCTCAT

CRISPR arrays and Neighbor proteins around NC_009767_25

CRISPR arrays

The CRISPR arrays of NC_009767_25

>merge|NC_009767|25|1249931-1250043|CRISPRCasFinder
TCCGCGACAGCGGACTGGCCAGGGCATCTGCCCGCGACGCTGCCAGGTGCAATGCTTCAATGTCTCTTGCTCATTCCGCGACAGCGGACTGGCCAGGGCATCTGCCCGCGACG

>NC_009767|25|22|1249931-1250043|CRISPRCasFinder
TCCGCGACAGCGGACTGGCCAGGGCATCTGCCCGCGACG	CTGCCAGGTGCAATGCTTCAATGTCTCTTGCTCAT
TCCGCGACAGCGGACTGGCCAGGGCATCTGCCCGCGACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119487.1|1248771_1249764_-|DUF368-domain-containing-protein	unknown	unknown	gnl|CDD|377196
NC_009767.1|WP_012119493.1|1256473_1257379_-|sugar-kinase	unknown	unknown	gnl|CDD|238571
NC_009767.1|WP_012119497.1|1260492_1261623_+|sodium-ion-translocating-decarboxylase-subunit-beta	unknown	unknown	gnl|CDD|377182
NC_009767.1|WP_012119484.1|1246636_1247032_+|hypothetical-protein	unknown	unknown	gnl|CDD|226054
NC_009767.1|WP_012119495.1|1258995_1259340_+|sodium-pump-decarboxylase-subunit-gamma	unknown	unknown	gnl|CDD|377277
NC_009767.1|WP_012119479.1|1241137_1242037_-|decarboxylating-6-phosphogluconate-dehydrogenase	unknown	unknown	gnl|CDD|236582
NC_009767.1|WP_012119488.1|1250239_1251592_-|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223587
NC_009767.1|WP_012119490.1|1253422_1254673_+|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl|CDD|179997
NC_009767.1|WP_157042550.1|1245015_1245534_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012119478.1|1239604_1240771_+|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|234623
NC_009767.1|WP_012119491.1|1254681_1255929_+|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl|CDD|179997
NC_009767.1|WP_041331660.1|1257443_1258985_+|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl|CDD|227136
NC_009767.1|WP_012119483.1|1245557_1246574_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NC_009767.1|WP_012119496.1|1259336_1259792_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit	unknown	unknown	gnl|CDD|236449
NC_009767.1|WP_012119492.1|1255947_1256472_+|PH-domain-containing-protein	unknown	unknown	gnl|CDD|367615
NC_009767.1|WP_012119485.1|1247194_1248058_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|369777
NC_009767.1|WP_041330227.1|1248511_1248709_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041331654.1|1242364_1243495_+|GHMP-kinase	unknown	unknown	gnl|CDD|225941
NC_009767.1|WP_041330222.1|1243898_1245008_+|sortase	unknown	unknown	gnl|CDD|320678
NC_009767.1|WP_012119489.1|1251957_1252731_+|histidinol-phosphatase	unknown	unknown	gnl|CDD|238819

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119487.1|1248771_1249764_-|DUF368-domain-containing-protein	gnl|CDD|377196	pfam04018, DUF368, Domain of unknown function (DUF368). Predicted transmembrane domain of unknown function. Family members have between 6 and 9 predicted transmembrane segments.	3.07349e-97
NC_009767.1|WP_012119493.1|1256473_1257379_-|sugar-kinase	gnl|CDD|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	3.02698e-104
NC_009767.1|WP_012119497.1|1260492_1261623_+|sodium-ion-translocating-decarboxylase-subunit-beta	gnl|CDD|377182	pfam03977, OAD_beta, Na+-transporting oxaloacetate decarboxylase beta subunit. Members of this family are integral membrane proteins. The decarboxylation reactions they catalyze are coupled to the vectorial transport of Na+ across the cytoplasmic membrane, thereby creating a sodium ion motive force that is used for ATP synthesis.	4.98193e-179
NC_009767.1|WP_012119484.1|1246636_1247032_+|hypothetical-protein	gnl|CDD|226054	COG3523, IcmF, Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport].	0.00196639
NC_009767.1|WP_012119495.1|1258995_1259340_+|sodium-pump-decarboxylase-subunit-gamma	gnl|CDD|377277	pfam04277, OAD_gamma, Oxaloacetate decarboxylase, gamma chain.	2.30479e-05
NC_009767.1|WP_012119479.1|1241137_1242037_-|decarboxylating-6-phosphogluconate-dehydrogenase	gnl|CDD|236582	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase.	0
NC_009767.1|WP_012119488.1|1250239_1251592_-|DEAD/DEAH-box-helicase	gnl|CDD|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	3.9262e-146
NC_009767.1|WP_157042550.1|1245015_1245534_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.47642e-14
NC_009767.1|WP_012119478.1|1239604_1240771_+|S1-RNA-binding-domain-containing-protein	gnl|CDD|234623	PRK00087, PRK00087, bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1.	6.79371e-108
NC_009767.1|WP_012119491.1|1254681_1255929_+|glucose-1-phosphate-adenylyltransferase	gnl|CDD|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	2.21367e-167
NC_009767.1|WP_041331660.1|1257443_1258985_+|acyl-CoA-carboxylase-subunit-beta	gnl|CDD|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NC_009767.1|WP_012119483.1|1245557_1246574_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.29544e-54
NC_009767.1|WP_012119496.1|1259336_1259792_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit	gnl|CDD|236449	PRK09282, PRK09282, pyruvate carboxylase subunit B; Validated.	7.91258e-26
NC_009767.1|WP_012119492.1|1255947_1256472_+|PH-domain-containing-protein	gnl|CDD|367615	pfam03703, bPH_2, Bacterial PH domain. Domain found in uncharacterized family of membrane proteins. 1-3 copies found in each protein, with each copy flanked by transmembrane helices. Members of this family have a PH domain like structure.	1.27524e-13
NC_009767.1|WP_012119485.1|1247194_1248058_+|methyltransferase-domain-containing-protein	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	2.21343e-11
NC_009767.1|WP_012119490.1|1253422_1254673_+|glucose-1-phosphate-adenylyltransferase	gnl|CDD|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NC_009767.1|WP_041331654.1|1242364_1243495_+|GHMP-kinase	gnl|CDD|225941	COG3407, MVD1, Mevalonate pyrophosphate decarboxylase [Lipid metabolism].	3.66996e-44
NC_009767.1|WP_041330222.1|1243898_1245008_+|sortase	gnl|CDD|320678	cd05829, Sortase_F, Sortase domain found in the class F family of sortases. Class F sortases are mainly present in Actinobacteria, Chlorobacteria and Firmicutes. Their functions are largely unknown.	1.48916e-27
NC_009767.1|WP_012119489.1|1251957_1252731_+|histidinol-phosphatase	gnl|CDD|238819	cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate fructose-1,6-bisphosphate, inositol monophospate, 3'-phosphoadenosine-5'-phosphate, or similar substrates.	4.39316e-98

Protein sequences

>NC_009767.1|WP_012119487.1|1248771_1249764_-|DUF368-domain-containing-protein
MHTPEAATRPFSALRLFFTGIAMGIADLIPGVSGGTMAFILGIYEHLLSAIKSFNVQLLRLLGQGRWRAALTSIPWGFLIPLGLGVGTAVLAMARVMRYLLENQPVYLFAFFFGLIVASIIAVGATVRWNPGAAAALAGGTAAGYVIVGLVPLTMPHDPVTLFFSGALAIMAMILPGISGSFILLILGQYAYVLDAVADLNLLAIVPVALGAVVGLLGFVRLLSWLLRHYHNVTVAVLMGFMVGSLRKIWPWKEVVETMLDRHGEPVPIRERNILPDMAAQEFWIALAIAVIGFVLLNVIDHAQTGANPMLRRLGRNRQARQEQDSRVPG
>NC_009767.1|WP_041330227.1|1248511_1248709_+|hypothetical-protein
MNIIWALLSVLFGAYFLHLGIQGFRRGTITYRLHTYTGCLAKVVSGFCLLIGLGGLLIALNFLQS
>NC_009767.1|WP_012119485.1|1247194_1248058_+|methyltransferase-domain-containing-protein
MASHTARSASIHAVRRYYEQNTRLFRALGLGNRAHAVHRAVWDEATATFDAALQRVNALALAEVRTLLAEQSVSVLRLLDLGCGLGGTLAYCARALPEARLAGVTLSMTQAQIAQRTLPRARAVVITGDFHHLPFTANFHVALAIESLAHSHDLNRAFEQASAALLPGGRLIVCDDVVVRAPSNAAEERWLTTFRAGWCVPGVQLLDETIAAARRAGFVLRSARDLTGALRLHRLPPFLAGAARDLMRLAGRASLFFHSVSGSLALQECLARGIVAYHLMVFEKRRR
>NC_009767.1|WP_012119484.1|1246636_1247032_+|hypothetical-protein
MIPLRNSLRQRRLRFPMLWMTGWTLTLAGIVLALLIWQIGAPWVAVLIGGSGALLSAAGGWWQWATRQCPPRRPTLFVIRHRQHQAMRLLRSIEADLSCHIEIVEMLVRQVDAMDGSVNDNHDRGRRGEGV
>NC_009767.1|WP_012119483.1|1245557_1246574_-|serine-hydrolase
MIPETHPVDNLLRPFDGHVPGISALLLVDGSAQYARALGKANLEQNTAISIATNFRLASVSKQFTAAAVLRLAERGALSLDEPIVRFFESAPAFWRQITVHHLLTHTSGLVDYEELIDPNTATQLHDCDVFALVRRVDTGYAAPGAAFRYSNTGYCLLALIVERVAAQPFAAFLREQVFLPAGMRFTVAYEGESSAIPRRAFGYSFRGGTFVRTDQNLTSATLGDGGIYSSTIDLERWDAALSNDTLLPEPWRAAMFTPHIAMPSGESYGYGWFLTSIAGRRAAYHTGETIGFRTAIVRLLDRRCTAVVLANRSEAAPLPLARTLIETALEKDMVSWE
>NC_009767.1|WP_157042550.1|1245015_1245534_-|Uma2-family-endonuclease
MTDAPSATDIGHLLDMLVREQRIKLEITGGVPTWRLLPSVRHQKVIDRIRASITPVSEVSGGCGCYHLSDVSLVFPDGSYRRPDIAIFCIEPPDIDESWECVPEAVIEIVSPGYSEKDLSINPTWYIDQGVRDVLVVEPRERWVQHFSAGRPPATHPWHYTAELHCGCRVTI
>NC_009767.1|WP_041330222.1|1243898_1245008_+|sortase
MIARLLMIIIVCAGALLPSSAHAQRGERCFTETGYCIGGRIREFWEQNGGLRVFGYPITPLQTETIEGRTLQVQWFERARLELHPANRRPYDVQLGRLGAELLARSDRGGTPVNVAASGECRLFPQTGVSACGPILAAWRSVGLQLDGKPGVSEAESLALFGVPLTDARLETLADGKAYVVQWFERGRFEVHPENMPPANVLLGLLGREYGPVARAGRTAGDVPARIVAGDVGMDARIVAVGLDAQGMPIVPDHDVGWYNRSALPGQGENVVLWGHVLRFSHAPRIPAPFARLKELRPGARLTVYDSNGTAFDYVVTRQVWVRPTDVEWMLPQGRERLTLISCIGDKVIVGREVVDMSHRLITIAEPVR
>NC_009767.1|WP_041331654.1|1242364_1243495_+|GHMP-kinase
MATADADLRAALRAHGLTWEEYPDLTGAARERGAAAALAYPMQGVLKYHGLSDWDYRIAFLPSVSLCNDAGHTLTLVEFDPDLATDCATINGHVARGRELERVRQSLDAIRAASGATVRARVMSRNVTRGTRMGKGLGSSAAASAALALAAIAALYGDEAAANRRLVSCMARLLAGSGCRSAAGGCSIWFSSPGMPHEDSFAVRLDDAGQLDDVRLITVPLDSRIGLKTEQAHLDAPGSALFRCWMLSRRDEALACIAAARTGDWRTLGQWAELDSMRLHGITMSGSLENKLIGWEPENIVLFRMCNDLRSSGVPVYCSTDTGPTAVFITHRDYEDAVVSAIEGLGLSLEAIRGRVAGPARLVDIAWAGGELGVAD
>NC_009767.1|WP_012119479.1|1241137_1242037_-|decarboxylating-6-phosphogluconate-dehydrogenase
MDIGITGLGRMGANMARRWLRGGHRVVVHNRSRGPVDELATAGAVPAYTLDELVAALKPPRAVWVMLPAGEVTERAIVALANLMAPGDTIVDAGNTMYKDDLRRAEELKARGIYYVDQGTSGGIWGLELGYCLMVGGDADVVARLEPAFRTLAPQDGYLHCGPVGSGHFVKMVHNGVEYGMMQAYAEGFEIMRSKTEFNLDLHKIAAVWNHGSVVRSWLLELAEDAFRQDPHLESIQGYVEDSGEGRWTIQTAIELDVPAPVITLSLFERFHSRKPESFAAKVLAALRKGFGGHPVKPA
>NC_009767.1|WP_012119478.1|1239604_1240771_+|S1-RNA-binding-domain-containing-protein
MKAVPDNAVQETEDFDWTQMLDDYDYARPQRGEVREGVVMKIEDGGILVSIGTKREGIIPIADVRAIGDEVLNNLKVGDRIQVYVQDPENRQGDLVLSLTMVQVARDWEEAARLSAEGGIVQGQVIGYNKGGLLVQFNRIRGFVPASQVAQLHGRTAAEERQQALQRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLLTELQPGDILTGRVNQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLSPGQEVRVMVVEIDAERERIGLSLRRLQPNPWDTIDQRYSLGQLVSGPVTNVAPFGAFVQIEEAVEGLIHASELDADPQAQPRDLLQPGQIITARIISLDKQRQRMGLSLRRNSADEPPPEETPVEAPSTDM
>NC_009767.1|WP_012119488.1|1250239_1251592_-|DEAD/DEAH-box-helicase
MSFEIFRFHPQINAGIRDLGYHTPTPIQEQVIPHALAGRDVIGIAQTGTGKTAAFVLPILHHLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKHTGIRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLLDHLERGTLTLDHLEVLTLDEADQMFDMGFLPDVRRILRLAPVERQTMLFSATMPDAVRSLAREALRDPLTVQIGRSAPVATVTHAIYPVPEHLKTSLLIELLERTDAESVLIFTRTKHRAQRLGDTLARLGYRATSLHGNLSQNRRQAALDGFRSGRYQILTATDIAARGIDVARISHVINYDMPQTAEAYTHRIGRTGRAARTGDAFTLVTRGDTAMVRAIERLIGEPLKREIVPGFDYNAAAPVHETRSDAVHSNRHTAPRHHEAHPHAAPHGAAPSRRRASRDHDTGARPAHTPRITGMMRTERLDRREARRRRD
>NC_009767.1|WP_012119489.1|1251957_1252731_+|histidinol-phosphatase
MASETLEALREFAADLAWHAGRLTLRYFQTGITPDIKEDRTPVTIADREAEQVMRRMIEARYPHHSILGEEEGETRPGASHRWILDPIDGTKSFVQGVPLYGVLVGLERDGEAVVGAVSFPALGDFLTAAKGQGCQWNGRQARVSQVREVRQATLLSSDAESMAPRGREAAYRRLAASVRLVRTWGDAYGYSLVATGRAEIMLDPVMSVWDCAALFPIVTEAGGTFTDWHGAPTIHAGEAIGTNGLLLEQVLNIIRG
>NC_009767.1|WP_012119490.1|1253422_1254673_+|glucose-1-phosphate-adenylyltransferase
MRVVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKFRIIDFTLSNCVNSGIFDVAVLTQYRPHSLNAHIGNGKPWDLDRANGGVQLLQPYQGRRDESWYKGTADAVYQNLNYIRERRADLVLVLSGDHIYKMNYAEMIEFHQQKRADMTVAVMHVPLEETDRFGIMTVDENQRVIEFTEKPKNRDKGTLASMGIYLFNVDTLIKRLSENGEGSPRIDFGKHVIPAMIGRDAVYAFPFEGYWVDVGTIQSYWETSMDLLNPDNTLNLYDTDWVIHTRSEERPPAKMGPQARVSRSLICNGCIIRGTVEHSVLSPGVYVSPGAVVRDSVVMNDTWIGPGAVLDRVIVDKNVVVGAGVRLGCGDDLTPNREQPDKLMTGITIVGKGAHIPPNIRIGRNVIINADRDEEDFPTGDVKSGETI
>NC_009767.1|WP_012119491.1|1254681_1255929_+|glucose-1-phosphate-adenylyltransferase
MLRTFAMILAGGESPALSVLTAERSEAAVPFAGKYRIIDFTLSNCVNSGIYNVGVLTQYRPRSLHEHIGVGKPWDLDRRIGGVRVLHPYLTSEGGAWQRGNADALRANLDIIAEQKVDAVLVLAGDHVYKMDYRPMLQLHEDLDADLTLAVHSVSPHEAHRYGIVSVDADGIVTQFEEKPRRPRSSLASMGIYVFRKHFLMEVLANGDEQNIGRDLMPKLVHQTSVVSYHFQGYWADVGTVQAYYEANMALLVETPALDLYDPEWVIHTRSEERPAAEIGEHARVDGNLLCDGCRIYGTVARSIIAPGVVVGEGAVVRDSILLSATVVEPGAVVDRCIVDKDVVIGSGAVVGDGEDNTPNQRSPDLLNTGLTLVGRSAQIPPNVRIGRNVVIRPRVTAAAFGGQTLVSSGATITR
>NC_009767.1|WP_012119492.1|1255947_1256472_+|PH-domain-containing-protein
MTFEQNRARVVAAIWQAIAQSGVDLSSVPRDQQDRLVAAIADTLLPTVNQMLDEVAPPVSAEVSGDERILWEGRPFLSLTERYVLTTERVRIYRGLIGRAVDDIELVRLQDVDFSQNAGERILGIGDIHLRGADVSTPEATLRNVHQPEEVRELIRRAWLDARKRYGVSFREQM
>NC_009767.1|WP_012119493.1|1256473_1257379_-|sugar-kinase
MPDVVTLGECMAVLYPPDPVSLDEARTLLIDIGGAEANLAIALCRLGHSARFISRVGDDPFGKRIRTVLSNEGVDTSSLRTDPDAQTGVFFREWLADGARRVYYYRRNSAASRIGPDDLTPAQFSGAQIVHLTGITPALSASCAAACMRAIDLARAAGALVSFDPNFRPRLWRAAQARDTLIPLMRAADILLMGHEDAQALFEVSNDDDALATAAALGARIVVLKCAERGARALVAGQRLAVPAAPVAHVIDPVGAGDGFNAGFLAGWLRGWSISESLTLGARIGAAAVATLGDYAGYPRL
>NC_009767.1|WP_041331660.1|1257443_1258985_+|acyl-CoA-carboxylase-subunit-beta
MTADDPRILELRALRERARQGGGPERIARHHARGKLTARERLDLLLDPGSFYEFEPFATGRLVDGETFYGDGVVTGYGKIDGRTVFVYSQDFTVLGGSLGEAQARKICRVMDLALSDGAPIIGLIDSGGARIQEGVHSLGGYGEIFRRNTKCSGVVPQISVMLGPCAGGAAYSPAVTDLIIMVERRSFMFITGPDVIKEVTGETIDLEGLGGAYVHMAISGACHLTAPDDQTALALCRLALSYLPSNNTENPPFVPTDDDPLRADEELNRIVPLDPGKAYRMHDVVERVVDHGSWLELQPMWAMNAITGWARMGGRSVGIVAQEPSVMAGVIDIDASDKIARFVRTCDCFNIPLVTFVDSPGFLPGIDQEHRGIIRHGAKVLYAYAEATVPKISIVTRKAYGGAYIVMSSKSLGGDISFAWPSAEVAVMGADGAVNLLYRDQIASAPDPAAERARLAREYERKFNNPYHAAAAGFFDDVIEPRETRARVIAALDALRDKSVAPPPRRHGNMPV
>NC_009767.1|WP_012119495.1|1258995_1259340_+|sodium-pump-decarboxylase-subunit-gamma
MPDNLRIALSLLVIGMSITFGALLLLWGLMALLTALTSRSVGETPAAAEADERPSLPVQPDLSKRRRRAAAAAVAIVLAREQAARSVVATTSTVSPWQAAGRMARVGQEGRERL
>NC_009767.1|WP_012119496.1|1259336_1259792_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit
MKVRVLIEGTAYEVEIVDLHSRPVVAIVDGERFEVWPESASALPVGSLDGRQAQAPPASPAPSLSPSAVSAPSAAPPIESGTVRAPIPGVILAVRVKPGDQVTAGQEVCVLEAMKMQNSIRAKQSGVVSAVYVSDGQHVKHHQPLMVIKSE
>NC_009767.1|WP_012119497.1|1260492_1261623_+|sodium-ion-translocating-decarboxylase-subunit-beta
MDFSTLIPELIQGLANLTPGNLVMIAVAATLIALAVVKQYEPVLLLPIGFGCLVANIPLTGMTDGEGLFGILYRAGISTELFPLLIFIGVGAMIDFGPLLAMPRMALLGAAGQFGIFGTLILATLLGFPLNQAASIGVIGAIDGPTSIYVASQLAPELLAPIAVAAYSYMSLVPIIQPPLMRLLTSRRERRIRMAYAPRPVSRQALILFPLVVTLIIGLLVPAATPLISMLMLGNLLRESGVVERLSNAAQNEVINVATLFLGLTIGSTMGAESFLSLVTLQVLGLGLLAFVLDTVAGLLFGKVLALVSGGTVNPLIGAAGISAFPMAGRLAAKVALAEDPDNFILMHAMGANTAGQLGSVVAGGALLALVSGILG

Crispr_ID: NC_009767_26

• CRISPR_ID: NC_009767_26
• CRISPR_location: 1294968-1295075
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas7

Consensus repeat of NC_009767_26

Consensus_repeat	Method
GCGCGTAGGCTGCACAGCGGCAGCGACGCACTCTC	CRISPRCasFinder

spacers of NC_009767_26

>26.1|1295003|38|NC_009767|CRISPRCasFinder
CGGTGTCATAGCCGCCGGAGCGGTGTGGGTGCATGAAT

CRISPR arrays and Neighbor proteins around NC_009767_26

CRISPR arrays

The CRISPR arrays of NC_009767_26

>merge|NC_009767|26|1294968-1295075|CRISPRCasFinder
GCGCGTAGGCTGCACAGCGGCAGCGACGCACTCTCCGGTGTCATAGCCGCCGGAGCGGTGTGGGTGCATGAATGCGCGTAGGCTGCACAGCGGCAGCGACGCACTCTC

>NC_009767|26|23|1294968-1295075|CRISPRCasFinder
GCGCGTAGGCTGCACAGCGGCAGCGACGCACTCTC	CGGTGTCATAGCCGCCGGAGCGGTGTGGGTGCATGAAT
GCGCGTAGGCTGCACAGCGGCAGCGACGCACTCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119540.1|1311103_1311949_+|NERD-domain-containing-protein	unknown	unknown	gnl|CDD|377990
NC_009767.1|WP_012119528.1|1292199_1292856_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl|CDD|178974
NC_009767.1|WP_012119527.1|1291497_1292055_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|131997
NC_009767.1|WP_012119537.1|1304887_1307128_+|hypothetical-protein	unknown	unknown	gnl|CDD|377001
NC_009767.1|WP_157042555.1|1291018_1291171_-|XamI-family-restriction-endonuclease	unknown	unknown	gnl|CDD|312917
NC_009767.1|WP_157042554.1|1290903_1291017_-|XamI-family-restriction-endonuclease	unknown	unknown	gnl|CDD|312917
NC_009767.1|WP_012119531.1|1295420_1295804_-|response-regulator	unknown	unknown	gnl|CDD|381085
NC_009767.1|WP_012119526.1|1289692_1290091_+|Zn-ribbon-domain-containing-OB-fold-protein	unknown	unknown	gnl|CDD|224462
NC_009767.1|WP_012119536.1|1303440_1304616_-|galactokinase	unknown	unknown	gnl|CDD|179937
NC_009767.1|WP_012119529.1|1292872_1293547_+|peptidase-M50	unknown	unknown	gnl|CDD|100079
NC_009767.1|WP_012119533.1|1298946_1301325_-|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NC_009767.1|WP_157042553.1|1290173_1290320_+|hypothetical-protein	unknown	unknown	gnl|CDD|132912
NC_009767.1|WP_012119534.1|1301441_1302632_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|274368
NC_009767.1|WP_012119525.1|1288522_1289677_+|acetyl-CoA-acetyltransferase	unknown	unknown	gnl|CDD|235688
NC_009767.1|WP_041330240.1|1294664_1294892_+|hypothetical-protein	cas7	cd09689_cas7_CAS-I-C	gnl|CDD|377458
NC_009767.1|WP_012119539.1|1310117_1310993_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|366166
NC_009767.1|WP_012119532.1|1296346_1298707_+|endopeptidase-La	unknown	unknown	gnl|CDD|223542
NC_009767.1|WP_012119530.1|1293557_1294322_+|triose-phosphate-isomerase	unknown	unknown	gnl|CDD|234589
NC_009767.1|WP_012119538.1|1307186_1310051_+|hypothetical-protein	unknown	unknown	gnl|CDD|376008
NC_009767.1|WP_041330242.1|1302662_1303349_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_041330240.1|1294664_1294892_+|hypothetical-protein	cas7	cd09689_cas7_CAS-I-C	1.1e-22	75.3	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119540.1|1311103_1311949_+|NERD-domain-containing-protein	gnl|CDD|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	6.66946e-16
NC_009767.1|WP_012119528.1|1292199_1292856_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl|CDD|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	5.70995e-98
NC_009767.1|WP_012119527.1|1291497_1292055_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|131997	TIGR02952, RNA_polymerase_sigma-70_factor_ECF_subfamily, RNA polymerase sigma-70 factor, TIGR02952 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is found in a limited number of Gram-positive bacterial lineages.	5.13502e-46
NC_009767.1|WP_012119537.1|1304887_1307128_+|hypothetical-protein	gnl|CDD|377001	pfam03170, BcsB, Bacterial cellulose synthase subunit. This family includes bacterial proteins involved in cellulose synthesis. Cellulose synthesis has been identified in several bacteria. In Agrobacterium tumefaciens, for instance, cellulose has a pathogenic role: it allows the bacteria to bind tightly to their host plant cells. While several enzymatic steps are involved in cellulose synthesis, potentially the only step unique to this pathway is that catalyzed by cellulose synthase. This enzyme is a multi subunit complex. This family encodes a subunit that is thought to bind the positive effector cyclic di-GMP. This subunit is found in several different bacterial cellulose synthase enzymes. The first recognized sequence for this subunit is BcsB. In the AcsII cellulose synthase, this subunit and the subunit corresponding to BcsA are found in the same protein. Indeed, this alignment only includes the C-terminal half of the AcsAII synthase, which corresponds to BcsB.	1.01394e-78
NC_009767.1|WP_157042555.1|1291018_1291171_-|XamI-family-restriction-endonuclease	gnl|CDD|312917	pfam09572, RE_XamI, XamI restriction endonuclease. This family includes the XamI (recognizes GTCGAC but cleavage site unknown) restriction endonuclease.	1.20102e-14
NC_009767.1|WP_157042554.1|1290903_1291017_-|XamI-family-restriction-endonuclease	gnl|CDD|312917	pfam09572, RE_XamI, XamI restriction endonuclease. This family includes the XamI (recognizes GTCGAC but cleavage site unknown) restriction endonuclease.	4.56117e-07
NC_009767.1|WP_012119531.1|1295420_1295804_-|response-regulator	gnl|CDD|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	5.90147e-26
NC_009767.1|WP_012119526.1|1289692_1290091_+|Zn-ribbon-domain-containing-OB-fold-protein	gnl|CDD|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	4.24658e-31
NC_009767.1|WP_012119536.1|1303440_1304616_-|galactokinase	gnl|CDD|179937	PRK05101, PRK05101, galactokinase; Provisional.	2.41754e-165
NC_009767.1|WP_012119529.1|1292872_1293547_+|peptidase-M50	gnl|CDD|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	2.57569e-16
NC_009767.1|WP_012119533.1|1298946_1301325_-|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	3.81995e-63
NC_009767.1|WP_157042553.1|1290173_1290320_+|hypothetical-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	0.000164215
NC_009767.1|WP_012119534.1|1301441_1302632_-|PAS-domain-containing-protein	gnl|CDD|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	7.8875e-80
NC_009767.1|WP_012119525.1|1288522_1289677_+|acetyl-CoA-acetyltransferase	gnl|CDD|235688	PRK06064, PRK06064, thiolase domain-containing protein.	9.53228e-125
NC_009767.1|WP_041330240.1|1294664_1294892_+|hypothetical-protein	gnl|CDD|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	4.87003e-25
NC_009767.1|WP_012119539.1|1310117_1310993_-|alpha/beta-hydrolase	gnl|CDD|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.31885e-25
NC_009767.1|WP_012119532.1|1296346_1298707_+|endopeptidase-La	gnl|CDD|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NC_009767.1|WP_012119530.1|1293557_1294322_+|triose-phosphate-isomerase	gnl|CDD|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	2.17832e-148
NC_009767.1|WP_012119538.1|1307186_1310051_+|hypothetical-protein	gnl|CDD|376008	pfam18582, HZS_alpha, Hydrazine synthase alpha subunit middle domain. The crystal structure of hydrazine synthase multiprotein complex isolated from the anammox organism Kuenenia stuttgartiensis implies a two-step mechanism for hydrazine synthesis: a three-electron reduction of nitric oxide to hydroxylamine at the active site of the gamma-subunit and its subsequent condensation with ammonia, yielding hydrazine in the active centre of the alpha-subunit. The alpha-subunit consists of three domains: an N-terminal domain which includes a six-bladed beta-propeller, a middle domain binding a pentacoordinated c-type haem (haem alphaI) and a C-terminal domain which harbours a bis-histidine-coordinated c-type haem (haem alphaII). This entry represents the middle domain of subunit alpha of hydrazine synthase (HZS).	5.36125e-09
NC_009767.1|WP_041330242.1|1302662_1303349_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.83279e-87

Protein sequences

>NC_009767.1|WP_041330240.1|1294664_1294892_+|hypothetical-protein
MFEHDRSAARGKMATRKLFVFKRESDLDDAPVHNLFELIAVQRKPEANPPRNFSDYEVTVDKAGVPQGMTLIEKR
>NC_009767.1|WP_012119530.1|1293557_1294322_+|triose-phosphate-isomerase
MRTPLLAGNWKMYKTTGEARELVEGLLHGLGDVGDRKVLVCPPFTALQTVHDLVQGTPIALGAQDVYIEPQGAFTGAISPVMLRDLGCAYVIVGHSERRAIFGEGDELIGKKVRAALAHDLTPILCVGETKPQRDAGHAETVVVAQVRAALTGMTPEQIGRIVIAYEPVWAIGTGDTATPADAQAMHETIRRILGDMAGSDTAATINILYGGSVKPDNIDDLMAQPDIDGALVGGASLKADSFLRIVHFLSPQE
>NC_009767.1|WP_012119529.1|1292872_1293547_+|peptidase-M50
MFSTPDEGIFAGRSNDTVELFKAWAGTTIAYAVFQTGATNLASSRFLTNLFIAAVVCGLGFVLHELAHRIVARRFGAQAHFVANVQMLAISIVVAFLPLGLFFAAPGAVWHRGYLTPRQSGLIALAGPATNMALAGVFLVAAPVAFLAGLRDTWIVQLFYTGVALNAWLGLFNMIPAGPFDGAKVLAWNSVVFGVTVAIGILLAFVLPGNLLNIWLFVLRLFGG
>NC_009767.1|WP_012119528.1|1292199_1292856_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MDFTNERRAMIDLLIRRGISDQRVLDAMAQTPRHVFVPAHERSHAYSDQALPIGEGQTISQPYMVALMIEALQLAPTDRVLEIGAGSGYAAAVLSRIVAKVHTIECREALAASAAALLRTLGYDNVTVHVGDGTQGLPDYAPFDAILVSAASPWVPAPLREQLASSGRLVIPVGGRQAQILLRLRRTGDTLRTERLCDVRFVPLIGGHAWTTEHYPER
>NC_009767.1|WP_012119527.1|1291497_1292055_-|sigma-70-family-RNA-polymerase-sigma-factor
MDASPADSDFPLSDSDLIKRAQDGDHAAFAQIYDRYAQPLYRYIYFRIGDPDLAEDLRAEVFLRAFEGLDRYEDRGWPLSAWLYRIARDRTVDVIRRRRLRQTVPLESWGGACEGPDHEVVMRLDHEELRRHLCDLTDDQRQVLYLRFMVDLPIQEVAQRLGRSEGAVKALQHRGLQSLARRLAL
>NC_009767.1|WP_157042555.1|1291018_1291171_-|XamI-family-restriction-endonuclease
MQLDLLKQNPEALSTLRMCTAPPLAADRLIGLAGVSKNLINTMVKRETSG
>NC_009767.1|WP_157042554.1|1290903_1291017_-|XamI-family-restriction-endonuclease
MAPALLDGDLTKLCNILIKSLDRDIFPWLKSGANPTN
>NC_009767.1|WP_157042553.1|1290173_1290320_+|hypothetical-protein
MIVLRAEIVLCGVRPEIAESIVHERMHLNDARHFATMQEGVAALLRHD
>NC_009767.1|WP_012119526.1|1289692_1290091_+|Zn-ribbon-domain-containing-OB-fold-protein
MDLAKHWRLRHARYRLEGQRNRLTGEVRFPPAPPRPGEAEDTWEPYLLSGRGRVYSFSVVRQPPEGFEDRTPYLVALVRLEEGPMVTAQLTDCDLDQAAIDMPVEMVTRRLRDLGPTGLIVYGYKFRPIMQM
>NC_009767.1|WP_012119525.1|1288522_1289677_+|acetyl-CoA-acetyltransferase
MRHVYIIGTGATAVGEHWDRNAASLAVEALTGALGTIPASRLGALYVASALSGTLHAQSQIGALIATTAGIPGVEAITVEAGGASGGVALRQACMAVASGAVDLAAVVGVEKVTDVLDARREAALALATDADWEAIHGVTLTALWALLMRRYMHEYGYAADDFAPFPINAHANGIANPHAMYRFPITADKVRSAPMVSEPLGLLDCSTAADGAAAVVIADEGLARELCANPVRIAGSAVATDTLALHCRSNPLWLAAAAQTTTAALRSAHLTHDDVQVFDITDPHGIAAALALESSGFAERGTAVALAREGAITPKGRLPLATGGGCKARGDTVGANGVYQIVELVAQLRGHAGAAQVNGARVALAQCMGGIGATVATHILTLD
>NC_009767.1|WP_012119531.1|1295420_1295804_-|response-regulator
MMAQHTILIVDDEANQRLMLTQALRTNDEREIASAASVAEALEWLNHHTADLIITDYNMPSANGLALVAHVRQRALPTRIILITAYYSPELQEAARQLGVDHFLTKPVPLSLLRRLANDLGDVTSSA
>NC_009767.1|WP_012119532.1|1296346_1298707_+|endopeptidase-La
MGKMIETSDHDLPLAILGELVIMPHMTVPLQVGQGKSYRAMEQAWENDHLVLLIFVSESEIETYKSSQPQQLPPVGVIARLDEFVKLPDGTARIILEGISRALVQTMLQSEPFYRVRCHAISDPEPRGIEIEALMDSVKQQIDEFVDHLGEVPQDAVAFVHRIDKPGHLADIVTWAPAFEFEERLDILNELDPVERLRRAHRLLARQLELLKLRQKIQQDTKEVLDQSQREYFLREQMRVIRRELGEDDDVDDPIDELKRKIAQLDAPDYVKEQAMHELKRLAQQGMNSPEAGVIRTYLDWILNLPWAEEELPEISLHEAQKVLDEDHYGLERVKERILEYLAVRKLAGNRMRSPILCFVGPPGVGKTSLGRSIARALGRKFVRTSLGGIRDEAEIRGHRRTYIGALPGRIIQGMKTAKSRYPVYVLDEIDKVGQDFRGDPTSALLEVLDPEQNNAFSDHYLEIPFDLSQVVFIATANQLDTIPNPLRDRMEIIEIGGYTEDEKLGIAQGFLVRKQREFHGLAPDQLIITDAAIIKLVREYTREAGVRNLEREIASLCRKTARKVAAASDGDPVEFPIVIDAPDIPNYLGPERYTFGLAEEKDEVGVATGVTWSPTGGDVLSIEVLPVRGKGGLQLTGQLGEVMKESAQAAMSYARFRAEQLGVDPSYFDEHNIHIHVPEGAVPKDGPSAGITLTTALISAVTGKPVRRDVAMTGEITLRGKVLPIGGLKEKTLAAHRAGIRTFILPKDNAKDIAELPKKVREELQLIPVSSMDEVLKIALAHQGS
>NC_009767.1|WP_012119533.1|1298946_1301325_-|diguanylate-cyclase
MYFFIQDDWKIALLSTAVESMSEAVLMTDPAGKILLLNRQFEELWRLTPGWMETITARDRIQQLAHLLCDPDQFLNRLDEVYAHPDLEALDWLTLRDGRIIERHTRGLHLEERIIGRIWVFRNITSREWAQRELKVMKRVLEALNRIVEPQRQLQAGVQALAQELEARAAWLWGVEGSDFARLLAHYGARELRIDLTPRAPGDPCECLQRLLDHGFPATAHPIVCPRLAHLNTPDQEPARHISVPIYSRDRPLAILNLVLPSIQPFNVAELRMFAAIANQFSVAIERARLFESVREEQRAAEVLRQAAATLSASLDFEQVLDHVLDQIVALMPCDGASVMLVEGTQARVVRVYGYEALSDEAERAIHTVTFEIARTPTLRRLLETRQPWIIGETHNNPAWVRIEYALPIRSWLGVPVIVRQQVVAFICVDSFVPYAYRPEHARRLATLASSVSLALHNAQLYEQTNAALERERRLSELTRTISSALDIEVILDTVVRLSVELVGADAAVLGLLSADHAALVRTHTFNMPESLMQHVQGVQPVWSAVETRQSVIRHHVMLKAGRVTHHIPSVIGTPIIAGGKALGVLAVYHLHRQRFFGEHDRSMLEIVGQQTGVAITNAHLFTETQRLATTDHLTGLFNRHHFFALAPRELERARRYHHPLALLVIDVDYFKTINDTFGHSAGDVVLRSVAKQMQRELRDADILARFGGEEFIALLPETNRAGALRVAERLRAAVAGVPLLREPPVQVTISIGCAVLDSVSEHDRLDTLIHRADRALYIAKSRGRNQVASDP
>NC_009767.1|WP_012119534.1|1301441_1302632_-|PAS-domain-containing-protein
MEWIIATLLLALVLSLIWGWRQRTRLQPPPSLPESPVPSPDAFSSLFHAAAAAFDDGLVLVDADRRVQYLNAHAEELLNLSRTVSVGQGLIMLARDYQVDAMVEEAIASAEPRESILQPLGRQRTLRLRAVPLDHGTKGALLLVRDVTQLSQLERSRRDLVANVSHELRTPLASIKLLVETLQSDPPAPVAQRMLSQIAQEVDAITQLVEELHELSQIESGRVALQLVPTPLAPLVAHTIERIRPQMERKSIRVIACLPDDLPPALIDGNRVGQVLLNLLHNASKFTPDGGQVAIEASVIMVGDGSPLPPGIPSSHLPGQWLLVSIADNGIGIPARDLARIFERFYKVDRARTRNAGGTGLGLAIAKHLVEGHGGRIWATSVEGEGSIFYLTLPVA
>NC_009767.1|WP_041330242.1|1302662_1303349_-|response-regulator-transcription-factor
MSTILLVEDDPILSETLRYNLEREGYSVINAVDGVAGLERARRDQPDMVILDVMLPRLDGFSVCRILRQESEVPILILTARQDEIDRIAGLELGADDYVAKPFSLGELLARVRAIMRRSERRIGMMREVLDAGSLRVDTGSRRAWRDNVELNLSQKEFDLLVCLMRNRSMALSRDMLLERVWGYDFLGDSRTVDVHIRWLREKVEPDPSRPVYIHTVRGIGYRFEAPN
>NC_009767.1|WP_012119536.1|1303440_1304616_-|galactokinase
MLDTGTLRARFQQHYGIHPSVIVRAPGRVNLIGEHTDYNDGFVFPVAIDRATYVAARLRHDQLVRVASSDLNEEDTFAIDQIERSNRPWHNYIRGVALALRVAGHPLLGADLLIASDVPRGAGLSSSAALEVAVGYAFQVLNNLNILGEELALLAQGAENNFVGVQCGIMDQLIAVLGRADHALLIDCRDLSYRAVPLPPSVAVVICDSHIPRTLAASAYNQRRQECDMAVQLLRRWYPGIRALRDVSEDHLAAHSDALPEPIRSRARHVVRENRRTLQGAEALERGDVVTFGRLMNESHASLRDDYQVSLPDIDILVETAHHLAGCYGSRLTGAGFGGCTVSLVERNEVESFSRDLLRVYHNATGRTATIYVCRASDGVGRATDNAGPQE
>NC_009767.1|WP_012119537.1|1304887_1307128_+|hypothetical-protein
MLWMPWFHRLSSCVLILLIIVGSAGSARAQGGAPSQPERDQNVVTLERIGSNDQTLSGVFDGTRYLFNIPANWRLESGAQAQLDLSVFFPLGGDQQRLGGFLEARFNRVLIGTVDLTQPGDRRVTFAIPDQALTPVRGDGRHEFEVALDNPTGCDVAPGERTAVVVRSTSRFILPHTLTPLDTDLRNLPRPIFQGSFDPDRATIVLPDDPSRDDLQAALTVAAAFGRLTEGRLQIDLTTVQRLSPQARTGNHLILSGSHTGLAPLARNLTLPAPLRETGFDAPGATPADGILQMIVSPWNAERVVLLVSGGSNEGVLKAARALSAVPARINGRPDVAVVRDLPNAPADMALAIDQRFSDLGLEPRVLRDRVGTFDLKFNLPPGQQIDEGAYLDLTFNHAATVDFGQSSLSVGLNGVPIGSVRFSDETTRVTTSRITIPPSAARSGANVLTIQTNLAPRSLCTDSRTIDLWTTIWPESALHLPMKPAAAEPRRTFNLSSYPLPFTLHPGLATTAFVLPQRAPAAWNAAALLAFQIGRQTRDAILQPLVVFADNVPSDVRVSRDLLIVGRPSALPILTDLGDVLPAPFDANSDAPRSIDAPVVYRVPPDASVAYLQMVAAPWNPERVVVAALGSDDAGIEQAALMLIDPRQRARLAATLAIVDPQQRVTLGHGRAVITGAAPTPVVTATPIATPTAQPTAQPDQPAPVPESDTSSNNALLLVAALAAAIVGIGVVIFWRVPWRRPPGT
>NC_009767.1|WP_012119538.1|1307186_1310051_+|hypothetical-protein
MLMQRRWQPALRTILSFVLCLLLFLMSAPAQAQTPLPPLVFVARSRLATGDYLFPRDVGPAGHLITGMTKFAPGSKLLIRDQAGQLRVLIDTARPAGDPLNPLGLRDVQSPDVSFDARRIVFAGTFGPETFRNQPNGRPYYSWRLFEIGVDGRGLRQLTHSDRDITIPEGPANAEAYAFYDDLFPAYLADGRIVFSSSRYPARSPYDGRRSFNLYMIDGDGGNMRRLTTERSAALHPAPLPDGRIVFSRWWVNFNQPSERGIYNRIDNRAGMEIARDQSGRPIMVERRIQVVETAPPALAASQPTAPPKPTPLPTISFVEKIDPATGSIVRLTKTPAPPTPTPRARPTATPTAALPGGTPRTIVVEQPITGYRLPDGTLVYSNTNTTFNPARGRLADGFPIRDAPNTWHLMAIEADGSGMRRFAWTPRYASALTNDSGLDTYNAVQPAVVLSGGELLIAYTTQRDQTMAHSTLYTGVRVARPGIENMALNTTESIAGYRWDDGTAFRPPYALAPAGLPDGRIIFAQTAAISAPARTGTYTDTRNGRTITLRLQSSSLRYELRTIYPNGAQNEVVPLAGLSDDYDAVEARPIVARPVGDGPGMWRLPRGTPPPVSDDPLESNVPLGLLDTFGNPAYPWSRRSIQSVELVAVRNANVYANPPLELPFINNSPPPGSVAFADIYIDANQFGGATSRAPNPDDQARAVKWLTVPVNPDGSFIASAPADVPTFIVLRDKSGRIVRGGNRHTLSIAQGNSAGRPGQPMFCIGCHMGHASGSIANPSLAERGWTNIAPAASIAASSSIENGAPARINDRRGYVTAPNGTLIDRTPPWTANGGAGQWIRLEWQLPMAILEVRLVGAEPGQEGRSADYEVSGELRFYLRGQELGGTARSVEAVAPLSRGGTLIRLPQPIAADRVEFTVTAVRGAQRGAPAPAALSEIEVAGQGATPDALGVGR
>NC_009767.1|WP_012119539.1|1310117_1310993_-|alpha/beta-hydrolase
MFHDFQSMRIPTRDAEIHLVRGGSGPPLLLLHGYPQTHLMWRKVAPRLAADFTVIAADLRGYGDSSKPPGGADHAAYSKRAMAQDMVEVMDALGFSRFMVAGHDRGARVVHRLCRDHPDVVIRAAVLDIAPTLFMYTTADRAFAEAYYHWFFLIQPYDLPERLIGADPKYYLRKKLAHWGRTPSAFEPDVFAEYVRCFSDPATIHATCEDYRAAASIDLRHDEADLHVPIACPLLALWGAEGFIGRRYDVLAVWRQHAVDVRGHAVPGGHYLPEEAPEETYAALRTFFAET
>NC_009767.1|WP_012119540.1|1311103_1311949_+|NERD-domain-containing-protein
MARLIQQPDSIRQDFYRRIRAKIQYEKNEYQQCINRDMPFLGGFMNEFTGFMFEMDRLWNHMKGATGEHLVLHAIARFLPHSWVIAQGAILEPYPNWFTQIDHVLIGPPGIFLVETKAWSGSYFVQGDKWKRKDGHCWVNCSSPTRQADYHRNMWLLWMQQHVSGDFYRKIIPLIHSVIVLTNIEWIKAKSTPVPILIGTRCLINYLLSQKQIGLQASEIETIAHLTAFQPRYNQQVPRCPKCHALMIPRLAKKGHLQGNWFYGCPNYPACREIHSIQNIP

Crispr_ID: NC_009767_27

• CRISPR_ID: NC_009767_27
• CRISPR_location: 1330006-1330098
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas5,cas7,cas3,WYL

Consensus repeat of NC_009767_27

Consensus_repeat	Method
GTCGCCTTCCCCCCGGAAGGCGTGGA	CRISPRCasFinder

spacers of NC_009767_27

>27.1|1330032|41|NC_009767|CRISPRCasFinder
TTGAAACTGCGGAAAAGTCGTGATAGGAGCGATGGATGACG

CRISPR arrays and Neighbor proteins around NC_009767_27

CRISPR arrays

The CRISPR arrays of NC_009767_27

>merge|NC_009767|27|1330006-1330098|CRISPRCasFinder
GTCGCCTTCCCCCCGGAAGGCGTGGATTGAAACTGCGGAAAAGTCGTGATAGGAGCGATGGATGACGGTCGCCTTCCCCCCGGAAGGCGTGGA

>NC_009767|27|24|1330006-1330098|CRISPRCasFinder
GTCGCCTTCCCCCCGGAAGGCGTGGA	TTGAAACTGCGGAAAAGTCGTGATAGGAGCGATGGATGACG
GTCGCCTTCCCCCCGGAAGGCGTGGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_041330252.1|1328294_1329221_-|IS66-family-transposase	unknown	unknown	gnl|CDD|376980
NC_009767.1|WP_041331683.1|1324543_1325479_+|DevR-family-CRISPR-associated-autoregulator	cas7	pfam01905_cas7_CAS-I	gnl|CDD|376656
NC_009767.1|WP_012119559.1|1336423_1337290_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119558.1|1333532_1336034_-|ligase-associated-DNA-damage-response-DEXH-box-helicase	unknown	unknown	gnl|CDD|274994
NC_009767.1|WP_012119556.1|1331689_1332994_-|BCD-family-MFS-transporter	unknown	unknown	gnl|CDD|349950
NC_009767.1|WP_012119547.1|1319116_1320172_+|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_009767.1|WP_012119560.1|1338034_1339258_+|MFS-transporter	unknown	unknown	gnl|CDD|340883
NC_009767.1|WP_041330254.1|1329254_1329968_-|hypothetical-protein	unknown	unknown	gnl|CDD|237871
NC_009767.1|WP_157042783.1|1342102_1343134_+|glycosyltransferase	unknown	unknown	gnl|CDD|133016
NC_009767.1|WP_157042558.1|1327534_1327774_+|hypothetical-protein	unknown	unknown	gnl|CDD|187766
NC_009767.1|WP_157042556.1|1326338_1326566_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119553.1|1326645_1326951_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119555.1|1330244_1330565_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_012119548.1|1320174_1322754_+|DEAD/DEAH-box-helicase	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NC_009767.1|WP_157042782.1|1341291_1342032_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|379312
NC_009767.1|WP_157042559.1|1339703_1341089_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119557.1|1333201_1333486_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119564.1|1343130_1344615_+|sugar-transferase	unknown	unknown	gnl|CDD|274398
NC_009767.1|WP_157042557.1|1326982_1327324_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119551.1|1325481_1326177_+|hypothetical-protein	cas5	cls000048_cas5_CAS-I-A	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012119547.1|1319116_1320172_+|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	1.5e-39	130.5	2.4
NC_009767.1|WP_041331683.1|1324543_1325479_+|DevR-family-CRISPR-associated-autoregulator	cas7	pfam01905_cas7_CAS-I	2.5e-63	208.3	0.0
NC_009767.1|WP_012119548.1|1320174_1322754_+|DEAD/DEAH-box-helicase	cas3	COG1203_cas3_CAS-I	6.2e-55	181.4	0.0
NC_009767.1|WP_012119551.1|1325481_1326177_+|hypothetical-protein	cas5	cls000048_cas5_CAS-I-A	1.4e-65	215.8	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_041330252.1|1328294_1329221_-|IS66-family-transposase	gnl|CDD|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.97591e-38
NC_009767.1|WP_012119547.1|1319116_1320172_+|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	9.40307e-32
NC_009767.1|WP_012119556.1|1331689_1332994_-|BCD-family-MFS-transporter	gnl|CDD|349950	cd06176, MFS_BCD_PucC-like, Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily. The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.0469e-132
NC_009767.1|WP_012119558.1|1333532_1336034_-|ligase-associated-DNA-damage-response-DEXH-box-helicase	gnl|CDD|274994	TIGR04121, ATP-dependent_helicase, DEXH box helicase, DNA ligase-associated. Members of this protein family are DEAD/DEAH box helicases found associated with a bacterial ATP-dependent DNA ligase, part of a four-gene system that occurs in about 12 % of prokaryotic reference genomes. The actual motif in this family is DE[VILW]H.	0
NC_009767.1|WP_157042782.1|1341291_1342032_+|methyltransferase-domain-containing-protein	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.24696e-24
NC_009767.1|WP_012119560.1|1338034_1339258_+|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.10884e-20
NC_009767.1|WP_157042558.1|1327534_1327774_+|hypothetical-protein	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.04322e-07
NC_009767.1|WP_012119555.1|1330244_1330565_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	3.23611e-14
NC_009767.1|WP_012119548.1|1320174_1322754_+|DEAD/DEAH-box-helicase	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	9.79114e-48
NC_009767.1|WP_157042783.1|1342102_1343134_+|glycosyltransferase	gnl|CDD|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	9.25248e-117
NC_009767.1|WP_012119564.1|1343130_1344615_+|sugar-transferase	gnl|CDD|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	1.03342e-125
NC_009767.1|WP_041331683.1|1324543_1325479_+|DevR-family-CRISPR-associated-autoregulator	gnl|CDD|376656	pfam01905, DevR, CRISPR-associated negative auto-regulator DevR/Csa2. This group of families is one of several protein families that are always found associated with prokaryotic CRISPRs, themselves a family of clustered regularly interspaced short palindromic repeats, DNA repeats found in nearly half of all bacterial and archaeal genomes. These DNA repeat regions have a remarkably regular structure: unique sequences of constant size, called spacers, sit between each pair of repeats. It has been shown that the CRISPRs are virus-derived sequences acquired by the host to enable them to resist viral infection. The Cas proteins from the host use the CRISPRs to mediate an antiviral response. After transcription of the CRISPR, a complex of Cas proteins termed Cascade cleaves a CRISPR RNA precursor in each repeat and retains the cleavage products containing the virus-derived sequence. Assisted by the helicase Cas3, these mature CRISPR RNAs then serve as small guide RNAs that enable Cascade to interfere with virus proliferation. Cas5 contains an endonuclease motif, whose inactivation leads to loss of resistance, even in the presence of phage-derived spacers. This family used to be known as DUF73. DevR appears to be negative auto-regulator within the system.	1.28417e-97
NC_009767.1|WP_041330254.1|1329254_1329968_-|hypothetical-protein	gnl|CDD|237871	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional.	0.00360973

Protein sequences

>NC_009767.1|WP_041330254.1|1329254_1329968_-|hypothetical-protein
MLSNYAAWACYETVVPEEVHRRAARCEWPATPTHGSWCKIAKCKRSVLAAQCLDQCISDQDTLIRAVTTRKAQRVTVQGFIPPLDDIPRFRDTGAMDDPLPPPDGIPPDVWNTWSLAARVLITTLVQQVAALTTRVQDLEQRLAQTSQNSSKPHSSDPPSAPLRPAKTPRGRPRGGQPDHPGATRERRETDTIVPLRPTACPQCATTLAPTLPDATPPQTTQGWELPPIILIVTDYV
>NC_009767.1|WP_041330252.1|1328294_1329221_-|IS66-family-transposase
MMDALPPEARIGYGPRVTALVGHLHGTYHLSDRAIGDLLANVADLPIGLGSVVTSTQRVSQALSPLDAAIHTAVHTAAVVHIDETSWREAGQRRWLWAPTTDQGASVRITTSRGRVGLDALLPATFDGIVESDRWNAYNRYPAAHRQICWAHLTRNIRARAEGGMRDSPWARDRLDHVESMFTALHAFRDGATTRAGLQTDMQPIQQAIHTTVEDGRTRTWYKVTALSQELLTWWDVLWTFVTHPGVEPTNNAAERVLRPAVIWRTQCFGAQSADGSCFVEWIFSVLTTCRQQGRNVWNRLTDAVRAP
>NC_009767.1|WP_157042558.1|1327534_1327774_+|hypothetical-protein
MPQVIVKSRGVSISTDAILACAEGGTALPIVSGGGARSGAALYTTRLTGFVLIHRAQLQAYTDQRALTLAATIVLSKNR
>NC_009767.1|WP_157042557.1|1326982_1327324_+|hypothetical-protein
MLLRPNFSAFIHQLIERLTQLSTHYSPGSLLCLPTDRAARDALLRLTHAIALAADDTRWAVVRGHSACTCAAANLSDFMGNAEFVGLHTFLLVPALGRAMPCRQPHYQGQCPV
>NC_009767.1|WP_012119553.1|1326645_1326951_-|hypothetical-protein
MKVDAQARPSRLRIRGNLAHHGIVGNADLGHKHTTIAGDKAFLYETDERVVGKSTPQAEAPVRLARIIGARQETPNAMGLGPLERQHWDGKGFDRVAKHGR
>NC_009767.1|WP_157042556.1|1326338_1326566_-|hypothetical-protein
MTARLVFVQGGQQATNGGSETKRRRSGARVATGQFHHCTVEHATQSATVVIVGIFGNEAQVRRVCIAASKIYTAR
>NC_009767.1|WP_012119551.1|1325481_1326177_+|hypothetical-protein
MLWLIARYQPTSLFSLKHSDATSTGGKSLLVPTPFAIRTALLDAAIRTAGVGIGPQAFNTIKSLRLAIRPPAHAAVTGALVKILKPERKAAARGRAMQQTITFREYVHLAGVLSLAFGGDEATLQAITPWLMQVNYFGKRGSFMQLLEQPTLQPELPSGFVPLSGNSTSFPVDGTLQLLDDYGPNLQFDQVNIYNDKTLKKTDRSRLCVVLPYRLERSARSFTLYKALDDA
>NC_009767.1|WP_041331683.1|1324543_1325479_+|DevR-family-CRISPR-associated-autoregulator
MKPIYSLSICGRLTLELHSLNNEGGEGNQTMTRTVAVVDTAGNVHKVNAISGDMFKHIQAEHFYLLARENKMPLCKGCETFRADRILGDAEFLKDLPDTDSAAITNLLKKCALEDTEGTLIARGARSIPRKSVAEFSWVVGLPDKVRTESYFHVRYAQERGGEDVSQPIFHRPASSGVYASVANFELARIGFNDVSQTYAIADDERLRRHQTFLRSVLYTYVEPAGAMRNTQNPHILNFEGVVTASYGVLPAPTISPLADDYKEQVQAVARALDGDGKLEVHTFANTAEFAAVMQKIIQETKPYQLFAQGG
>NC_009767.1|WP_012119548.1|1320174_1322754_+|DEAD/DEAH-box-helicase
MALYPYQEQVKSHLLSGCSVVLQAPTGSGKTRAALAPFIEAFFDLPDDAFPKQCLYSVPMRVLASQFYREYRTLAERYERIHRRALDVRIQTGERPEDPELVGDLVFATLDQTLSSALGVPYSLSTGRANLNVGAVLGSYLVFDEFHLFPPEATQATLQLLRLVGRLAPFLLMTATFSQTMLESIGKLLDAEVVVVPPDEVASIETRQGQRPRKQRRFEVADQALDAKAVLAAHGRRSLAVCNTVDRAIALYEQLRQAGCRPAPVSDPTLAPIYQALAQARGEEWDRAVAQGVQILRERLAEGGEDKPWVMLLHSRFERPHRQLKEALLQALWNPQGLEAGGDPSLIVVATQVVEVGLDISAQTLHTEIAPAASVLQRAGRCARYPGEQGRVIVYPVPAKENGEPDYAPYSSKAEVAVCDRSWQAFRERQCAILDFAAEQEVINQAHSEADAAMLQAMQEGQGELWQRITDALVRGDASARPQLIRKVDSRTVIVYEPPFGLSEESPYRFQGISLWHGTLRGKLKALNQLRGDLGLDWAVRYPVAHGDEDDESITYTWKDAQTPDDISLSLIFAVHPRLASYDAEHGLRLGVASAGSYTSPTATLRRQRPDYAGYQLESYADHIAAMRRVFEGDPTSRIPLANGRLRRRLAWPARRFAEQDGDWRLPQGLLERAVRLGFALHDVGKLSEAWQRFAAKYQKAIGEGAPPFLVAHTHYERGNPAHEEAQKKVRCYKPSTHAGESAFASAQLLYEALEGRTYAGLYRAAFAAIARHHSPGLDKANPYRLHPRAGETVAEALAVVGDTSWRDWAQWLRSKEEAPNVRKHLPEAPPDGDWAWWFQYFIIVRILRLCDGLSQEEG
>NC_009767.1|WP_012119547.1|1319116_1320172_+|WYL-domain-containing-protein
MKRAANKAERLLQIEQLLLAHPEGLTQAELARRLGVNRSTILRNLADASRHIYEEPDGRLKIDHCADLINLRLNLHEALAMHLAARLLATRMDRQNRHAAAALRKLGHAMERWAQRISVHVLHAADIMDNAAQRDDPVYISVLERLTEGWASERKVRVWHQLATGEKVLEYLFSPYFIEPYAIGQTTHVIGRARLLGERGWSGEKMRTFKIERIRRAEMTAESYQIPEDFDPRVYLSDAWGIWSSEGEPVEVALRFSAQVARRVQETRWHRSERTELQPDGSLIWRARIAEPKEMIPWIRGWGADVEVLEPKALRETLMGEAKAMAELYGWRVSSSPTDKRSTTLDDFFGG
>NC_009767.1|WP_012119555.1|1330244_1330565_-|nucleotidyltransferase-domain-containing-protein
MKPVDHIPEIVRRIVQVSNPVKIVLFGSHARNAAGPDSDLDLLVVLAHSDHPRQDSWRIRRALRRLLVSVDIVVATTEQVQRLAQTPGLIYRTALQEGTVLYERTG
>NC_009767.1|WP_012119556.1|1331689_1332994_-|BCD-family-MFS-transporter
MRWTTIFRLGLINVAVALTAVPIESTLNRVMISELRLPASLVALLIALPYAFSPIQIWIGSFSDRHPLLGLRRTPYTVIGLLLCAGGSALSPTAAFAMAENFWAGLPLGLLAFGAWGMGFNFATVSYLSLATDLSGEEHRARTVGVMWFMLIVSVIIAGVSLSRMLRDYTPAALFTAFYGVCAVALLIGIAALWGLEARDDEAAPAERRSFAQMIATVAGTPQARLFFIYLVLLLIAILGQDVLLEPFAADVFGVPVEVTTRYTSIWGAALLVGLLATSPLARRRGKPFAAAIGGTLVAIGLVLIALTGILGMPEIFTPSLILFGFGSGVSTAANLALMLDMTIPGQIGAFVGAWGVANSMARLLGTVLSGVTRDILTDLFNDRMPGYVIVFLLQAAAMAASLALLPRISTARFRHEMAPSARELAALAGEAQG
>NC_009767.1|WP_012119557.1|1333201_1333486_+|hypothetical-protein
MKPRDSQGNDADELPIYLSIIGLAALLCFAFMMTGSFWMTTVVLVLGCLHLARYFPAVDEIVQNDIALRWLRHLTPLIIFGIFVFQVMVQQSMW
>NC_009767.1|WP_012119558.1|1333532_1336034_-|ligase-associated-DNA-damage-response-DEXH-box-helicase
MHHALRPIEEWFARRGWTPFPFQQEVWQAYLAGESGLIHATTGAGKTYAAWLGAVAEWLADKSSTRTTPALRVLWITPLRALVADTVEALRAPLDDLDVPWQVEARTGDTSAAVRARQRLRLPAALVTTPESLSLLLTQPEWRDLFADLRLVVVDEWHELLSTKRGVQVELALARLRGLHPHLRVWGVSATMGNLDAALDALIPVIEGQPSRARIVRGLLPKPMVIETLLPETIERFPWAGHLGLTLLPQVVATIERGKTSLVFTNTRSQAEIWYQALLEARPDWAGMLALHHGSLDRKVREWVEEALRARRLRCVVCTSSLDLGVDFSPVDQVIQIGSPKGVARLLQRAGRSGHRPGAVSRVTCAPASALELIEIAAARDAIAQERIEARQPLETPLDVLVQHLVTCALGGGFTADELLAEVRSTRAFRRLSDAEWQWALDFVVRGGASLHAYPEFHRVVKRDGRYVVANAEVARRHRINIGTIVSETTLKVQYTRGGVLGAVEESFAARLKTGDVFFFAGKALEFVQLRDTTVFVRKAERREGVTPRWMGGRMPLSTELSRAIRAWIEEARNGILRGAEMEAVRPLLEVQARWSLLPDADELLIERVQTREGHHLFVYPFEGRLAHEGMAALIAFRLSRLRPITFTMAMNDYGFELLAPEPAPLEEALGVVFDSARGAQRWSIAGADAPLFSVQRLADDILASLNATEMMKRQFREIARIAGLVYEGYPGEKSARQVQASSSLMYDVFAQYDPENRLLEQARREVLERQLEQSRLAAALARVAAGRIVVVDTPRPTPFAFPLLVDRLRESLSSEKLADRVRKMQLALEREA
>NC_009767.1|WP_012119559.1|1336423_1337290_-|hypothetical-protein
MSTRIFVTLTIILLTLLVQRSPTSVSSSTPSSKPHVIPPSTLLQGDAACVYRPSVQRFFCDTARDGGDAEVVVQFGLASDIPLLGDIDGDGRDDPCVYRPSVQRFFCDTARDGGDAEVVVQFGLASDIPLLGDIDGDGRDDPCVYRPSVQRFFCDTARDGGDAEVVVQFGLASDIPLLGDIDGDGRDDPCVYRPSVQRFFCDTARDGGDAEVAVQFGLASDIPLLGDIDGDGRDDPCVYRPSVQRFFCDTARDGGDAEVVVQFGVSGDIPLIGSLGQPFGVALPLVVR
>NC_009767.1|WP_012119560.1|1338034_1339258_+|MFS-transporter
MQSFSHLFLQRLERFVIGSYPESVRANVRIELFASFWYGLFFAASLTFFPVILRRLGATPFDLALYVIFSYIGQTLSPLSLALLQRASPLCFSIIAWSFGRGLLLCGALLTGAPWLLALAALFWIAEALPAPAYARIMQQIYPPRYRGRAMSAVRIGVAIVVLVATPVAGWALDQVGHQPLFALAAIFGVVSSLIFSRVRPLDGVAEPESPPTLRELLPIVRRDRRFMLYLIVLVVYGFGAVMALPLYPLVQVSRLQLSYTTIGYLNLVQSIFWLAGFFVWGRLLDRYGPLWVLRLSMLLAAFVPFTYVWAGNAWMLLPAFICQGLMQGGFELGITTGVIDLAERGRVMEYTALQAAIIGVRGMLAPLLGSLLLGIGASEALVLGAATGLVIASCVLLGAVQPPRTS
>NC_009767.1|WP_157042559.1|1339703_1341089_-|hypothetical-protein
MRLFVLLVILTPFALSSSPVVESEEMTFAAYLPLINVPDTRVLWGYDLRVSRGAQAESLLPTLPATWARAGDLVWGAIETQRGVYDWEAAAGLEANIRRLRAAGVEPIVLVQSAPAWARRLPDRACSPVAPEAYADLARFAAAVAARYRSGDLAVRYWQFWNEPDFTPAVADTKGIGCWNTGVAPWYGGDAYGAALRVFANAVRSVVPGAQIIGGNFAHFWPDDRQTLGFLRGMIEGGGLACDMIGFSGYTRWGSAERMTLKAQSLRRTLAAYGLAWMPLAAVEVADVCPEGQPCPPDFHQAQANYAARIYALAIALNLRGILWYTLLEQGAGFQHSHLADVGSSGVTPRPAFYAYRNAALLLQGAAYAGPPLNDVRFDQEGVPHMLRFIARDGAPLYVFWRPTAQDEAGWGLVTSSGRRATCISHLERPTPLAVDCSDQDGDGLIRFTVSDAPIYIRLAP
>NC_009767.1|WP_157042782.1|1341291_1342032_+|methyltransferase-domain-containing-protein
MTTRQQIERTHHDLVASRERRDFYAWGALDIADAYACSLIDSPQGKVILDLGCGRGAHTVRFAQSGAHVAAIDLSRGMVTVTQQRVITAGVGDRVAVQQMSAESLGFADATFDYVFGHSVLHHTDLAVTRREVWRVLKPGGRAVFLEPLDHNPLLNLFRRLTPWRRTPTEKPLRLRDLGFFAEPFVHSSHCEFYLLALGAFVFVPLQRRALFQRALRLLNAVDQKVFRQVPALRRYAWVTVLELRR
>NC_009767.1|WP_157042783.1|1342102_1343134_+|glycosyltransferase
MALPFVSIITPCYNEHRTIGLLLEGIYRQSYPRTAMEVVIADGGSTDATLEFIHAFQSRHPDLAIRVVPNPQRITPAALNRAIAAARGEILIRLDAHAIPARDYVARCVEALEQGLGDNVGGVWEIRPGDDSWIARAIAVAASHPLAVGDAHYRRAPETARSVDTVPFGAFRRALFDRIGLFNERLPINQDYELNARIRRHGGVVWLDPAIRSVYMRPTLGALARQYWRYGFWKARMLTHYPTTLRWRQAVPPLFVAGLLGLAISAPCAKAARRMLAALIGLYGGALGAAGAHAAVGRRDPALSAGLPLAIATMHFCWGSGFLWSVWSLLAERRSSEQVVQTR
>NC_009767.1|WP_012119564.1|1343130_1344615_+|sugar-transferase
MNRRAALNTASRSHAMPFHLRLEISERRLLLRIGDLALTAIAVFGALWVWARLADRSLDMGLVREQIGWVALIGIGWTLWMMLADMYNLRLVARVGPSMRRILLGGLALLFAYLILFFVLSRAPVTGMLAAIETGAPPLRFAPALAIVALVVLMVIWRMAYIRVLGAPHARRRLLILGAGRAGSILSHVILKGHSPYYEIVGFVDDTPQTRCAHIGSVPVLGGVDCLGDVVWERRVDEIVIASGEVSGEVLQVLMDCYENGVAITPMPLLYERLTGKIAVEHVGSQWYVALPLHSRPTRTAEAVMKRLLDLSGGIVLVVALLILLPFVALAIRLDSPGPVFHRQQRVGWRGKPFTVLKFRSMVQDAEPDGEAQWATKDDPRVTRVGRLLRRMRLDELPQALNVLRGEMSLVGPRPERPEFVERLQQIIPFYRVRLAVKPGLTGWAQINYGYGDSVEATLNKLQYDLYYLKHQSFWFDLLILARTVHVVLRMKGQ

Crispr_ID: NC_009767_28

• CRISPR_ID: NC_009767_28
• CRISPR_location: 1339587-1339683
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_28

Consensus_repeat	Method
AGGGTGACAGGCGCCCGACGTCGTGATGG	CRISPRCasFinder

spacers of NC_009767_28

>28.1|1339616|39|NC_009767|CRISPRCasFinder
TGACGCCGCCGATGGAACGCGCCAAGTCGCAGTCCGCTT

CRISPR arrays and Neighbor proteins around NC_009767_28

CRISPR arrays

The CRISPR arrays of NC_009767_28

>merge|NC_009767|28|1339587-1339683|CRISPRCasFinder
AGGGTGACAGGCGCCCGACGTCGTGATGGTGACGCCGCCGATGGAACGCGCCAAGTCGCAGTCCGCTTAGGGCGACAGGCGCCCGACGTCGTGATGG

>NC_009767|28|25|1339587-1339683|CRISPRCasFinder
AGGGTGACAGGCGCCCGACGTCGTGATGG	TGACGCCGCCGATGGAACGCGCCAAGTCGCAGTCCGCTT
AGGGCGACAGGCGCCCGACGTCGTGATGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119566.1|1347707_1349060_-|aspartate-aminotransferase-family-protein	unknown	unknown	gnl|CDD|223239
NC_009767.1|WP_041330252.1|1328294_1329221_-|IS66-family-transposase	unknown	unknown	gnl|CDD|376980
NC_009767.1|WP_012119569.1|1351602_1353054_-|potassium/proton-antiporter	unknown	unknown	gnl|CDD|235410
NC_009767.1|WP_012119559.1|1336423_1337290_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119556.1|1331689_1332994_-|BCD-family-MFS-transporter	unknown	unknown	gnl|CDD|349950
NC_009767.1|WP_012119558.1|1333532_1336034_-|ligase-associated-DNA-damage-response-DEXH-box-helicase	unknown	unknown	gnl|CDD|274994
NC_009767.1|WP_157042782.1|1341291_1342032_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|379312
NC_009767.1|WP_012119560.1|1338034_1339258_+|MFS-transporter	unknown	unknown	gnl|CDD|340883
NC_009767.1|WP_012119564.1|1343130_1344615_+|sugar-transferase	unknown	unknown	gnl|CDD|274398
NC_009767.1|WP_157042558.1|1327534_1327774_+|hypothetical-protein	unknown	unknown	gnl|CDD|187766
NC_009767.1|WP_012119570.1|1353513_1354020_-|thiol-peroxidase	unknown	unknown	gnl|CDD|179055
NC_009767.1|WP_012119567.1|1349341_1349950_+|hypothetical-protein	unknown	unknown	gnl|CDD|380573
NC_009767.1|WP_012119568.1|1350030_1351377_-|diaminopimelate-decarboxylase	unknown	unknown	gnl|CDD|143501
NC_009767.1|WP_012119555.1|1330244_1330565_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_157042783.1|1342102_1343134_+|glycosyltransferase	unknown	unknown	gnl|CDD|133016
NC_009767.1|WP_157042559.1|1339703_1341089_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119557.1|1333201_1333486_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042560.1|1344756_1347420_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042557.1|1326982_1327324_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330254.1|1329254_1329968_-|hypothetical-protein	unknown	unknown	gnl|CDD|237871

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119566.1|1347707_1349060_-|aspartate-aminotransferase-family-protein	gnl|CDD|223239	COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism].	0
NC_009767.1|WP_041330252.1|1328294_1329221_-|IS66-family-transposase	gnl|CDD|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.97591e-38
NC_009767.1|WP_012119569.1|1351602_1353054_-|potassium/proton-antiporter	gnl|CDD|235410	PRK05326, PRK05326, potassium/proton antiporter.	0
NC_009767.1|WP_012119556.1|1331689_1332994_-|BCD-family-MFS-transporter	gnl|CDD|349950	cd06176, MFS_BCD_PucC-like, Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily. The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.0469e-132
NC_009767.1|WP_012119558.1|1333532_1336034_-|ligase-associated-DNA-damage-response-DEXH-box-helicase	gnl|CDD|274994	TIGR04121, ATP-dependent_helicase, DEXH box helicase, DNA ligase-associated. Members of this protein family are DEAD/DEAH box helicases found associated with a bacterial ATP-dependent DNA ligase, part of a four-gene system that occurs in about 12 % of prokaryotic reference genomes. The actual motif in this family is DE[VILW]H.	0
NC_009767.1|WP_157042782.1|1341291_1342032_+|methyltransferase-domain-containing-protein	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.24696e-24
NC_009767.1|WP_012119560.1|1338034_1339258_+|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.10884e-20
NC_009767.1|WP_157042558.1|1327534_1327774_+|hypothetical-protein	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.04322e-07
NC_009767.1|WP_012119570.1|1353513_1354020_-|thiol-peroxidase	gnl|CDD|179055	PRK00522, tpx, thiol peroxidase.	5.6513e-77
NC_009767.1|WP_012119567.1|1349341_1349950_+|hypothetical-protein	gnl|CDD|380573	cd06350, PBP1_GPCR_family_C-like, ligand-binding domain of membrane-bound glutamate receptors that mediate excitatory transmission on the cellular surface through initial binding of glutamate; categorized into ionotropic glutamate receptors (iGluRs) and metabotropic glutamate receptors (mGluRs). Ligand-binding domain of membrane-bound glutamate receptors that mediate excitatory transmission on the cellular surface through initial binding of glutamate and are categorized into ionotropic glutamate receptors (iGluRs) and metabotropic glutamate receptors (mGluRs). The metabotropic glutamate receptors (mGluR) are key receptors in the modulation of excitatory synaptic transmission in the central nervous system. The mGluRs are coupled to G proteins and are thus distinct from the iGluRs which internally contain ligand-gated ion channels. The mGluR structure is divided into three regions: the extracellular region, the seven-spanning transmembrane region and the cytoplasmic region. The extracellular region is further divided into the ligand-binding domain (LBD) and the cysteine-rich domain. The LBD has sequence similarity to the LIVBP, which is a bacterial periplasmic protein (PBP), as well as to the extracellular region of both iGluR and the gamma-aminobutyric acid (GABA)b receptor. iGluRs are divided into three main subtypes based on pharmacological profile: NMDA, AMPA, and kainate receptors. All family C GPCRs have a large extracellular N terminus that contain a domain with homology to bacterial periplasmic amino acid-binding proteins.	0.00390426
NC_009767.1|WP_012119568.1|1350030_1351377_-|diaminopimelate-decarboxylase	gnl|CDD|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	7.65924e-172
NC_009767.1|WP_012119555.1|1330244_1330565_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	3.23611e-14
NC_009767.1|WP_157042783.1|1342102_1343134_+|glycosyltransferase	gnl|CDD|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	9.25248e-117
NC_009767.1|WP_012119564.1|1343130_1344615_+|sugar-transferase	gnl|CDD|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	1.03342e-125
NC_009767.1|WP_041330254.1|1329254_1329968_-|hypothetical-protein	gnl|CDD|237871	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional.	0.00360973

Protein sequences

>NC_009767.1|WP_012119560.1|1338034_1339258_+|MFS-transporter
MQSFSHLFLQRLERFVIGSYPESVRANVRIELFASFWYGLFFAASLTFFPVILRRLGATPFDLALYVIFSYIGQTLSPLSLALLQRASPLCFSIIAWSFGRGLLLCGALLTGAPWLLALAALFWIAEALPAPAYARIMQQIYPPRYRGRAMSAVRIGVAIVVLVATPVAGWALDQVGHQPLFALAAIFGVVSSLIFSRVRPLDGVAEPESPPTLRELLPIVRRDRRFMLYLIVLVVYGFGAVMALPLYPLVQVSRLQLSYTTIGYLNLVQSIFWLAGFFVWGRLLDRYGPLWVLRLSMLLAAFVPFTYVWAGNAWMLLPAFICQGLMQGGFELGITTGVIDLAERGRVMEYTALQAAIIGVRGMLAPLLGSLLLGIGASEALVLGAATGLVIASCVLLGAVQPPRTS
>NC_009767.1|WP_012119559.1|1336423_1337290_-|hypothetical-protein
MSTRIFVTLTIILLTLLVQRSPTSVSSSTPSSKPHVIPPSTLLQGDAACVYRPSVQRFFCDTARDGGDAEVVVQFGLASDIPLLGDIDGDGRDDPCVYRPSVQRFFCDTARDGGDAEVVVQFGLASDIPLLGDIDGDGRDDPCVYRPSVQRFFCDTARDGGDAEVVVQFGLASDIPLLGDIDGDGRDDPCVYRPSVQRFFCDTARDGGDAEVAVQFGLASDIPLLGDIDGDGRDDPCVYRPSVQRFFCDTARDGGDAEVVVQFGVSGDIPLIGSLGQPFGVALPLVVR
>NC_009767.1|WP_012119558.1|1333532_1336034_-|ligase-associated-DNA-damage-response-DEXH-box-helicase
MHHALRPIEEWFARRGWTPFPFQQEVWQAYLAGESGLIHATTGAGKTYAAWLGAVAEWLADKSSTRTTPALRVLWITPLRALVADTVEALRAPLDDLDVPWQVEARTGDTSAAVRARQRLRLPAALVTTPESLSLLLTQPEWRDLFADLRLVVVDEWHELLSTKRGVQVELALARLRGLHPHLRVWGVSATMGNLDAALDALIPVIEGQPSRARIVRGLLPKPMVIETLLPETIERFPWAGHLGLTLLPQVVATIERGKTSLVFTNTRSQAEIWYQALLEARPDWAGMLALHHGSLDRKVREWVEEALRARRLRCVVCTSSLDLGVDFSPVDQVIQIGSPKGVARLLQRAGRSGHRPGAVSRVTCAPASALELIEIAAARDAIAQERIEARQPLETPLDVLVQHLVTCALGGGFTADELLAEVRSTRAFRRLSDAEWQWALDFVVRGGASLHAYPEFHRVVKRDGRYVVANAEVARRHRINIGTIVSETTLKVQYTRGGVLGAVEESFAARLKTGDVFFFAGKALEFVQLRDTTVFVRKAERREGVTPRWMGGRMPLSTELSRAIRAWIEEARNGILRGAEMEAVRPLLEVQARWSLLPDADELLIERVQTREGHHLFVYPFEGRLAHEGMAALIAFRLSRLRPITFTMAMNDYGFELLAPEPAPLEEALGVVFDSARGAQRWSIAGADAPLFSVQRLADDILASLNATEMMKRQFREIARIAGLVYEGYPGEKSARQVQASSSLMYDVFAQYDPENRLLEQARREVLERQLEQSRLAAALARVAAGRIVVVDTPRPTPFAFPLLVDRLRESLSSEKLADRVRKMQLALEREA
>NC_009767.1|WP_012119557.1|1333201_1333486_+|hypothetical-protein
MKPRDSQGNDADELPIYLSIIGLAALLCFAFMMTGSFWMTTVVLVLGCLHLARYFPAVDEIVQNDIALRWLRHLTPLIIFGIFVFQVMVQQSMW
>NC_009767.1|WP_012119556.1|1331689_1332994_-|BCD-family-MFS-transporter
MRWTTIFRLGLINVAVALTAVPIESTLNRVMISELRLPASLVALLIALPYAFSPIQIWIGSFSDRHPLLGLRRTPYTVIGLLLCAGGSALSPTAAFAMAENFWAGLPLGLLAFGAWGMGFNFATVSYLSLATDLSGEEHRARTVGVMWFMLIVSVIIAGVSLSRMLRDYTPAALFTAFYGVCAVALLIGIAALWGLEARDDEAAPAERRSFAQMIATVAGTPQARLFFIYLVLLLIAILGQDVLLEPFAADVFGVPVEVTTRYTSIWGAALLVGLLATSPLARRRGKPFAAAIGGTLVAIGLVLIALTGILGMPEIFTPSLILFGFGSGVSTAANLALMLDMTIPGQIGAFVGAWGVANSMARLLGTVLSGVTRDILTDLFNDRMPGYVIVFLLQAAAMAASLALLPRISTARFRHEMAPSARELAALAGEAQG
>NC_009767.1|WP_012119555.1|1330244_1330565_-|nucleotidyltransferase-domain-containing-protein
MKPVDHIPEIVRRIVQVSNPVKIVLFGSHARNAAGPDSDLDLLVVLAHSDHPRQDSWRIRRALRRLLVSVDIVVATTEQVQRLAQTPGLIYRTALQEGTVLYERTG
>NC_009767.1|WP_041330254.1|1329254_1329968_-|hypothetical-protein
MLSNYAAWACYETVVPEEVHRRAARCEWPATPTHGSWCKIAKCKRSVLAAQCLDQCISDQDTLIRAVTTRKAQRVTVQGFIPPLDDIPRFRDTGAMDDPLPPPDGIPPDVWNTWSLAARVLITTLVQQVAALTTRVQDLEQRLAQTSQNSSKPHSSDPPSAPLRPAKTPRGRPRGGQPDHPGATRERRETDTIVPLRPTACPQCATTLAPTLPDATPPQTTQGWELPPIILIVTDYV
>NC_009767.1|WP_041330252.1|1328294_1329221_-|IS66-family-transposase
MMDALPPEARIGYGPRVTALVGHLHGTYHLSDRAIGDLLANVADLPIGLGSVVTSTQRVSQALSPLDAAIHTAVHTAAVVHIDETSWREAGQRRWLWAPTTDQGASVRITTSRGRVGLDALLPATFDGIVESDRWNAYNRYPAAHRQICWAHLTRNIRARAEGGMRDSPWARDRLDHVESMFTALHAFRDGATTRAGLQTDMQPIQQAIHTTVEDGRTRTWYKVTALSQELLTWWDVLWTFVTHPGVEPTNNAAERVLRPAVIWRTQCFGAQSADGSCFVEWIFSVLTTCRQQGRNVWNRLTDAVRAP
>NC_009767.1|WP_157042558.1|1327534_1327774_+|hypothetical-protein
MPQVIVKSRGVSISTDAILACAEGGTALPIVSGGGARSGAALYTTRLTGFVLIHRAQLQAYTDQRALTLAATIVLSKNR
>NC_009767.1|WP_157042557.1|1326982_1327324_+|hypothetical-protein
MLLRPNFSAFIHQLIERLTQLSTHYSPGSLLCLPTDRAARDALLRLTHAIALAADDTRWAVVRGHSACTCAAANLSDFMGNAEFVGLHTFLLVPALGRAMPCRQPHYQGQCPV
>NC_009767.1|WP_157042559.1|1339703_1341089_-|hypothetical-protein
MRLFVLLVILTPFALSSSPVVESEEMTFAAYLPLINVPDTRVLWGYDLRVSRGAQAESLLPTLPATWARAGDLVWGAIETQRGVYDWEAAAGLEANIRRLRAAGVEPIVLVQSAPAWARRLPDRACSPVAPEAYADLARFAAAVAARYRSGDLAVRYWQFWNEPDFTPAVADTKGIGCWNTGVAPWYGGDAYGAALRVFANAVRSVVPGAQIIGGNFAHFWPDDRQTLGFLRGMIEGGGLACDMIGFSGYTRWGSAERMTLKAQSLRRTLAAYGLAWMPLAAVEVADVCPEGQPCPPDFHQAQANYAARIYALAIALNLRGILWYTLLEQGAGFQHSHLADVGSSGVTPRPAFYAYRNAALLLQGAAYAGPPLNDVRFDQEGVPHMLRFIARDGAPLYVFWRPTAQDEAGWGLVTSSGRRATCISHLERPTPLAVDCSDQDGDGLIRFTVSDAPIYIRLAP
>NC_009767.1|WP_157042782.1|1341291_1342032_+|methyltransferase-domain-containing-protein
MTTRQQIERTHHDLVASRERRDFYAWGALDIADAYACSLIDSPQGKVILDLGCGRGAHTVRFAQSGAHVAAIDLSRGMVTVTQQRVITAGVGDRVAVQQMSAESLGFADATFDYVFGHSVLHHTDLAVTRREVWRVLKPGGRAVFLEPLDHNPLLNLFRRLTPWRRTPTEKPLRLRDLGFFAEPFVHSSHCEFYLLALGAFVFVPLQRRALFQRALRLLNAVDQKVFRQVPALRRYAWVTVLELRR
>NC_009767.1|WP_157042783.1|1342102_1343134_+|glycosyltransferase
MALPFVSIITPCYNEHRTIGLLLEGIYRQSYPRTAMEVVIADGGSTDATLEFIHAFQSRHPDLAIRVVPNPQRITPAALNRAIAAARGEILIRLDAHAIPARDYVARCVEALEQGLGDNVGGVWEIRPGDDSWIARAIAVAASHPLAVGDAHYRRAPETARSVDTVPFGAFRRALFDRIGLFNERLPINQDYELNARIRRHGGVVWLDPAIRSVYMRPTLGALARQYWRYGFWKARMLTHYPTTLRWRQAVPPLFVAGLLGLAISAPCAKAARRMLAALIGLYGGALGAAGAHAAVGRRDPALSAGLPLAIATMHFCWGSGFLWSVWSLLAERRSSEQVVQTR
>NC_009767.1|WP_012119564.1|1343130_1344615_+|sugar-transferase
MNRRAALNTASRSHAMPFHLRLEISERRLLLRIGDLALTAIAVFGALWVWARLADRSLDMGLVREQIGWVALIGIGWTLWMMLADMYNLRLVARVGPSMRRILLGGLALLFAYLILFFVLSRAPVTGMLAAIETGAPPLRFAPALAIVALVVLMVIWRMAYIRVLGAPHARRRLLILGAGRAGSILSHVILKGHSPYYEIVGFVDDTPQTRCAHIGSVPVLGGVDCLGDVVWERRVDEIVIASGEVSGEVLQVLMDCYENGVAITPMPLLYERLTGKIAVEHVGSQWYVALPLHSRPTRTAEAVMKRLLDLSGGIVLVVALLILLPFVALAIRLDSPGPVFHRQQRVGWRGKPFTVLKFRSMVQDAEPDGEAQWATKDDPRVTRVGRLLRRMRLDELPQALNVLRGEMSLVGPRPERPEFVERLQQIIPFYRVRLAVKPGLTGWAQINYGYGDSVEATLNKLQYDLYYLKHQSFWFDLLILARTVHVVLRMKGQ
>NC_009767.1|WP_157042560.1|1344756_1347420_+|hypothetical-protein
MKTYPVPAMDVPRSCSESRHGAVGWRQWGLAGVLAILAFGIGLVFAPGGLRFDAADPAAERHLVRFSAAEANEREAYRWSERGAAMRLFGLTRRPLIVDLRMTSPRPAGAAPAEIRFALGSWHSNAFIIEGDWRRYQALLPPRPGAPDLRLETRTFRPAKESDKRDLGAALNRVAIFPADGLTPPIGAIATLGMVRAIILLLLPIALFAATSRTEPRTAPWIAVVGGAVLLAVAVAHPVDAVALLPDLWLIPVGTAVSAAIFFGAQPHLTPMLVFLRHALASDAARLAAVLVVAAIQGMVFLALVPPWQHYDEPAHFEFAWLLAFHPSWPAVGTVNPAIAWIGGEGRALSHLPTYHLLVSLPLRLTDGWSVIDQLYLARVVSLALFIATIAILGGIARTLFSVGHPMRWLLPLVAALIPPFADIMTAVNNDVGAIMAFSLFLWSVVHILVLGWSARRAAWMIGAALLAAAMKNVTLIAVPLAAVVLFIAWGIRQRWRWRRLVGLLAALVTGVLAFSLAWSDPAAWYRYGGVSGDGAARVALSDAPHGRHAFRLAAGFSPYEVSGLSAPLALADLPVIAGGPVTIGAWVWASRATTAAGPIILYNDLTPELRTITMASVDVDVQPRFVVWTFDAPPVMRTMQVLMPAPTPMNGEPPVTFFFDGLVVVQGKYPAHTPPQLNDAATAGHWNGQTVTNLVRNGSAEHGWLYLRPMIDSAAWPLVRRSPSRVLTSLLDFERTGPIVLFNVVPDLTFRSLMTFGWGEVEPEDRVWRNVLPIMMLALLLGFARAVVANAGHASPRRVAVAVFAFVGLLLWTNAALRILPALVAQPAPFPRYGFPAIAPLALVIAAGWLAWWPMHRRATGAAALVIAMLMVNALAYATMWWRWYV
>NC_009767.1|WP_012119566.1|1347707_1349060_-|aspartate-aminotransferase-family-protein
MTAIDVAERIQSDLAHLLHPLYHPSGHQSPKIWVKGCGAIVIDIEGREYIDGLSGLWNVHVGHGRRELAEAAAEQMTTLAYCSAYTGSSNLPAINLAERLSQLMYPSINTFFFTSGGAEATETSFKTARYYWKLLGKPDKVKFISRARGYHGVTMAAMSATGLPVYWPMFEPRVPGIIHIESPYPYRFVNPTPDISDGIAAANLLEEAILREGPDTVAAFIAEPVQGAGGVIVPQDDYFGRIREICDTYDVLLIADEVITGFGRTGRWFALEHYGIEPDIVQFAKGITSGYVPLGGIGVSDRIREAIHSAPPDKRYMHAYTYSGHPTCCAVALRNLQIIEEEGLVERAAQIGERLLNGLQTLYALDGVGDVRGKGMMAAVELVVDKATKQPYPAEANMGARVYQEMMRRGLFTRVLGDMILLAPPLVSTEEQIDRIVTIIGESVQAVIRG
>NC_009767.1|WP_012119567.1|1349341_1349950_+|hypothetical-protein
MGIFDFLFGRDRHNRQSRPVTGSTTRLSSDEQALERYRYFLRTAPPDAIEQAYTDAFAQLTPEQRAYALRELMNVLPPHERASVPQQDDPQTLARLATRAELREPGTVERLFNRHDAPAPVAHQAMPATGGMGFGGALAGTFLGALIGGVVGSMAAQAILDGFAADEMIGDLGIEEMSTGFEDFGGDLSADVGGDVDMGDGW
>NC_009767.1|WP_012119568.1|1350030_1351377_-|diaminopimelate-decarboxylase
MNHTTQEGINNAHLWPLTTVVDMHGRLMIGGCNVATLARQYGTPLYLFDEETIRSACRTWRTALAACYRGETAVHYASKALLNTALTHLIADEGLGLDVVSGGELYVALRAGFPPQRIHMHGNAKTRAELEQALASGIGQIIVDNLDELAMLANLTAYRSPPQPIALRIAPDIVTNTHAHIQTGHATSKFGLPLDALDAAAERLRTAPGLCLIGLHAHLGSQLFDLEPYAAEIDTLLDSASRLRDRHGFIIQQINIGGGAGVPYTADQHPFDVHALAMRLGEALTDECRRRGFPLLHLVIEPGRSIIARAGVALYTIIATKNLPHMRFLHIDGGMGDNIRPALYGARYSAVLAERANAPIEESVAITGRYCESGDVLIHAAPLPRASVGDILAVPVAGAYTLSMASTYNLTPRPAVVMVNGGSVRLIQRRETYEDMIARDVVSSQGQV
>NC_009767.1|WP_012119569.1|1351602_1353054_-|potassium/proton-antiporter
MSLELMLLIAALLLILSIIAGKASLRFGVPAPLLFLLIGMLAGSDGPGGIAFDDAWLAQSVGVLALVLILFSGGLYTDLQMIRPVLWTGLILANLGVVISALLVAVVAHLLLHFSLLEGFLLGAIISSTDAAAVFAVMRTRDVNLRDNLEGLIELESGSNDPIAVFLTIGLTMVLADPSRSLASLAPLFVLQMTIGGVAGYALGRIMAIAINRARLQLEGLYPALMLGLVLLTYGGTALINGSGFLAVYLAGIVLGNCDFAHKRSLLRFYDGLAWLMQIAMFLVLGLLVYPSRLVPLIGEGLLMSAFLIFVARPVAVFVSLAFTRYDWRAKAMVSWAGLRGAAPIVLATFPLLAGLDRAGVMFNLVFFIVLTSVLIQGTTIARVARWLGVQQSQPPATFRYPQEFIPQVSASSQLVELTVAPGSPACGRAIMELGLPRGALVVLIHRNTDTLVPGGTTILEPGDRVLLLTERSALNEVRRVLG
>NC_009767.1|WP_012119570.1|1353513_1354020_-|thiol-peroxidase
MERPNAFDFWGPKTLIGPELKPGDPAPAFTLTTGKDTISSQQFAGKPLVISVIPSIDTGVCSKQTRRFNQEAAALGDAVNILTVSADLPFAQGRWCGAEGVDKVVMASDHLDMSFGAAYGTYVKELRIESRAVFVVDKDGIIRHVEYVPVAGHEPNYDAALAALKELL

Crispr_ID: NC_009767_29

• CRISPR_ID: NC_009767_29
• CRISPR_location: 1402390-1402501
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_29

Consensus_repeat	Method
TGTGCGTCGGCGCGTCAATCGTTGCGAGCCGTTCC	CRISPRCasFinder

spacers of NC_009767_29

>29.1|1402425|42|NC_009767|CRISPRCasFinder
AGCCTTGTGGCGCTGCTCACCACCCTGCCGGAAGTTTCTCCG

CRISPR arrays and Neighbor proteins around NC_009767_29

CRISPR arrays

The CRISPR arrays of NC_009767_29

>merge|NC_009767|29|1402390-1402501|CRISPRCasFinder
TGTGCGTCGGCGCGTCAATCGTTGCGAGCCGTTCCAGCCTTGTGGCGCTGCTCACCACCCTGCCGGAAGTTTCTCCGTGTGCATCGGCGCGTCAATCGTTGCGAGCCGTTCC

>NC_009767|29|26|1402390-1402501|CRISPRCasFinder
TGTGCGTCGGCGCGTCAATCGTTGCGAGCCGTTCC	AGCCTTGTGGCGCTGCTCACCACCCTGCCGGAAGTTTCTCCG
TGTGCATCGGCGCGTCAATCGTTGCGAGCCGTTCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119614.1|1405754_1408355_+|DUF4157-domain-containing-protein	unknown	unknown	gnl|CDD|379338
NC_009767.1|WP_012119616.1|1409380_1410574_-|cell-division-protein-FtsZ	unknown	unknown	gnl|CDD|236468
NC_009767.1|WP_012119622.1|1415992_1417423_-|UDP-N-acetylmuramate--L-alanine-ligase	unknown	unknown	gnl|CDD|234757
NC_009767.1|WP_012119615.1|1408623_1409376_+|type-I-methionyl-aminopeptidase	unknown	unknown	gnl|CDD|235576
NC_009767.1|WP_012119618.1|1411853_1412681_-|FtsQ-type-POTRA-domain-containing-protein	unknown	unknown	gnl|CDD|224505
NC_009767.1|WP_012119606.1|1394117_1395752_-|replication-associated-recombination-protein-A	unknown	unknown	gnl|CDD|237355
NC_009767.1|WP_041331717.1|1401348_1402320_+|stage-II-sporulation-protein-M	unknown	unknown	gnl|CDD|376676
NC_009767.1|WP_041331713.1|1398656_1399553_-|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|334588
NC_009767.1|WP_012119604.1|1390594_1391752_-|FAD-binding-oxidoreductase	unknown	unknown	gnl|CDD|223737
NC_009767.1|WP_012119613.1|1404005_1405415_-|MFS-transporter	unknown	unknown	gnl|CDD|341045
NC_009767.1|WP_012119603.1|1390001_1390598_+|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl|CDD|234691
NC_009767.1|WP_012119617.1|1410591_1411836_-|cell-division-protein-FtsA	unknown	unknown	gnl|CDD|223918
NC_009767.1|WP_012119608.1|1397015_1398056_+|histone-deacetylase-family-protein	unknown	unknown	gnl|CDD|212525
NC_009767.1|WP_012119602.1|1389314_1389971_+|transcriptional-repressor-LexA	unknown	unknown	gnl|CDD|234688
NC_009767.1|WP_012119607.1|1396094_1396355_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl|CDD|225170
NC_009767.1|WP_012119619.1|1412673_1413789_-|D-alanine--D-alanine-ligase	unknown	unknown	gnl|CDD|234993
NC_009767.1|WP_012119621.1|1414718_1415996_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009767.1|WP_049768886.1|1400016_1401078_+|mannose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|380413
NC_009767.1|WP_012119609.1|1398062_1398647_+|thymidine-kinase	unknown	unknown	gnl|CDD|235272
NC_009767.1|WP_012119620.1|1413827_1414715_-|UDP-N-acetylmuramate-dehydrogenase	unknown	unknown	gnl|CDD|173112

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119614.1|1405754_1408355_+|DUF4157-domain-containing-protein	gnl|CDD|379338	pfam13699, DUF4157, Domain of unknown function (DUF4157). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteristic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.	3.27764e-16
NC_009767.1|WP_012119616.1|1409380_1410574_-|cell-division-protein-FtsZ	gnl|CDD|236468	PRK09330, PRK09330, cell division protein FtsZ; Validated.	0
NC_009767.1|WP_012119622.1|1415992_1417423_-|UDP-N-acetylmuramate--L-alanine-ligase	gnl|CDD|234757	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional.	1.69509e-180
NC_009767.1|WP_012119615.1|1408623_1409376_+|type-I-methionyl-aminopeptidase	gnl|CDD|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	3.08033e-152
NC_009767.1|WP_012119618.1|1411853_1412681_-|FtsQ-type-POTRA-domain-containing-protein	gnl|CDD|224505	COG1589, FtsQ, Cell division septal protein [Cell envelope biogenesis, outer membrane].	1.30979e-16
NC_009767.1|WP_012119606.1|1394117_1395752_-|replication-associated-recombination-protein-A	gnl|CDD|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NC_009767.1|WP_041331717.1|1401348_1402320_+|stage-II-sporulation-protein-M	gnl|CDD|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	3.63065e-33
NC_009767.1|WP_041331713.1|1398656_1399553_-|site-specific-DNA-methyltransferase	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	1.39673e-48
NC_009767.1|WP_012119604.1|1390594_1391752_-|FAD-binding-oxidoreductase	gnl|CDD|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	1.58783e-66
NC_009767.1|WP_012119613.1|1404005_1405415_-|MFS-transporter	gnl|CDD|341045	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.32483e-29
NC_009767.1|WP_012119603.1|1390001_1390598_+|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl|CDD|234691	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY.	9.7336e-48
NC_009767.1|WP_012119617.1|1410591_1411836_-|cell-division-protein-FtsA	gnl|CDD|223918	COG0849, ftsA, Cell division ATPase FtsA [Cell division and chromosome partitioning].	2.24121e-148
NC_009767.1|WP_012119608.1|1397015_1398056_+|histone-deacetylase-family-protein	gnl|CDD|212525	cd10001, HDAC_classII_APAH, Histone deacetylase class IIa. This subfamily includes bacterial acetylpolyamine amidohydrolase (APAH) as well as other Class II histone deacetylase (HDAC) and related proteins. Deacetylases of class II are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues of histones (EC 3.5.1.98) and possibly other proteins to yield deacetylated histones/other proteins. Mycoplana ramosa APAH exhibits broad substrate specificity and catalyzes the deacetylation of polyamines such as putrescine, spermidine, and spermine by cleavage of a non-peptide amide bond.	4.2939e-145
NC_009767.1|WP_012119602.1|1389314_1389971_+|transcriptional-repressor-LexA	gnl|CDD|234688	PRK00215, PRK00215, transcriptional repressor LexA.	8.99588e-72
NC_009767.1|WP_012119607.1|1396094_1396355_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl|CDD|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	9.92783e-13
NC_009767.1|WP_012119619.1|1412673_1413789_-|D-alanine--D-alanine-ligase	gnl|CDD|234993	PRK01966, ddl, D-alanine--D-alanine ligase.	0
NC_009767.1|WP_012119621.1|1414718_1415996_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.77158e-08
NC_009767.1|WP_049768886.1|1400016_1401078_+|mannose-6-phosphate-isomerase	gnl|CDD|380413	cd07010, cupin_PMI_type_I_N_bac, Phosphomannose isomerase in bacteria and archaea, N-terminal cupin domain. This subfamily contains type I phosphomannose isomerase (PMI; E.C. 5.3.1.8; also known as mannose-6-phosphate isomerase) found in many bacteria (e.g. Bacillus subtilis) and archaea. PMI catalyzes the reversible isomerization of fructose-6-phosphate (F6P) and mannose-6-phosphate (M6P), the first committed step in the synthesis of mannosylated glycoproteins. The active site, located within the N-terminal jelly roll-like beta-barrel cupin fold, contains a single essential zinc atom and forms a deep, open cavity large enough to contain M6P or F6P. PMI type I also has a C-terminal beta-barrel fold which has diverged considerably from the N-terminal domain and is not included here. This subfamily does not contain an alpha helical domain that exists in eukaryotic and some prokaryotic PMIs. F6P is a substrate for glycolysis and gluconeogenesis, while M6P is a substrate for production of activated mannose donor guanosine 5'-diphosphate D-mannose, an important precursor of mannosylated biomolecules such as glycoproteins, bacterial exopolysaccharides and fungal cell wall components. PMI is also essential for survival, virulence and possibly pathogenicity of some bacteria and protozoan parasites, as well as for cell wall integrity of certain yeasts. Thus, PMI is a potential target against fungal infections causing serious illness or death.	4.31447e-73
NC_009767.1|WP_012119609.1|1398062_1398647_+|thymidine-kinase	gnl|CDD|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	5.65302e-85
NC_009767.1|WP_012119620.1|1413827_1414715_-|UDP-N-acetylmuramate-dehydrogenase	gnl|CDD|173112	PRK14649, PRK14649, UDP-N-acetylmuramate dehydrogenase.	0

Protein sequences

>NC_009767.1|WP_041331717.1|1401348_1402320_+|stage-II-sporulation-protein-M
MLVEDFINRKKSSWERLSVIVERSRRGGLTSLEDEEITELGRLYRSATSDLAVARRDFPGHRVVDYLNGLVARAHAEVYQRRADRSSGLARYFAADLPRTFRETWLYTLASLLMFLIPALIGFFITLNDPPAGSLLVPGIDSVISDIRAGREWWKSINDEGRSASAALIATNNIRVAILAFAGGVLLGAPTLFVLAQNGLLLGVVAGAAQAYGFSGNLWGFVAAHGVIELSVIIIAGGAGLQLGWAVARPGLISRRAALMLAARRAVRLLLGCALLLIIAGAIEGFISPSDLSLALKCAVALLSGTALYTYLLLAGRERKRKS
>NC_009767.1|WP_049768886.1|1400016_1401078_+|mannose-6-phosphate-isomerase
MSSIDLYPLITQPRLVQPLWGGTFLGDWLGLSQPRPERLGEVWLVYEANPITEGALAGQTLAQVTRDYGAALVGERTIARYGADFPLLAKFIDAADRLSIQVHPDDAYAHTHEAATGFHGKTEAWHILCAASGADVVYGLAHSCDRAELAAAITAGALEPLLRRLPVSAGDTIFVPAGTLHAINAGIILFEIQQKSDLTYRVYDYGRVDAATGKPRELHIEKALDVIDYSPAPRGVVPPLPLEAGRDLLLACRSFALERLAFAGVLERTVDPATFEILTVIEGVVMLRWNGGIRALRRGEAVVLPACLGSYALAPTGEARLLRAYVPDLDALWREFAQRGVDATRITETVVER
>NC_009767.1|WP_041331713.1|1398656_1399553_-|site-specific-DNA-methyltransferase
MIDHNTTGAIYLADNLDILRALPSGSVDLIYIDPPFNTGKHQQRVQLKTERSDDGDRVGFQGQRYKSIILGSRRFSDVFDDYLAFLEPRLVEAHRVLAPSGSFYFHVDYREVHYCKVLLDAIFGRESFLNEIIWAYDYGGRPKNRWPPKHDNILLYVKNLSRYVFNVDEIERIPYMAPGLVGPEKAARGKLPTDCWWHTIVPTNGAEKTGYPTQKPLGILRRIVQASSKPGSLVLDFFAGSGTTGIAALELGRRFILVDNNPEALAVMARRFDGVAGIRWVGFDPAPYQQQTTAPIIP
>NC_009767.1|WP_012119609.1|1398062_1398647_+|thymidine-kinase
MTRLSSGGRIEVICGCMFSGKTEELIRRLNHVRLARQRLIAFTPRRDTRYRLGSLVSHNGLSVEARVIDSIRDTPAHLNTDIHVVAVDELHLLDDPPDAAREVCQDLADRGLRVIVAGLDQDFRAQPFPAMAQLMAVAEQVDKLYAICVRCGAYATRSQRLIDGKPAPADAPTIVVGGQELYEARCRACYEPAR
>NC_009767.1|WP_012119608.1|1397015_1398056_+|histone-deacetylase-family-protein
MIVVASDTHLQHNPPHEFLDGALIPIYETPERVAIIRAALERAAIGPVVEPRAFGIEPVRTVHDDGYLTYLETIYDRWVVAGGAPEAVIPGTLAVRWMSRPHDHPLAAPGYYTFDTCAPIVAGTYAAARAAADVALTGAELLLIGSRCAYALCRPPGHHAGRDLCGGYCFLNNAAIAAAYLVRNAPDATCAILDIDFHHGNGTQQIFYERSDVLFVSIHAAPSYQYPFFLGYADERGAGAGEGYNLNLPLDAGVGDREYLVALDRALDAIAAFAPRFLVLSAGFDTFEGDPVANHGDSFALSMAVYPEIGRRIAALNLPTLVVQEGGYAIDALGDNVVGLLQGLEE
>NC_009767.1|WP_012119607.1|1396094_1396355_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGPISWIIFGALAGWVASLLVGIEERQGCLMNIIIGILGAFVGGLIMDLLGFGGTNFGWDVRSFGVAVLGAIVLLAITGQIRQRRR
>NC_009767.1|WP_012119606.1|1394117_1395752_-|replication-associated-recombination-protein-A
MPRNQKTLFDTQREEALSRQAPLAARMRPRALDEFVGQDHIVGEGKLLRRAITNDALFSIILWGPPGSGKTTLARIIADTTHAHFEQLSAVSAGVADLRRVVKEAQDRLGMFQQRTIVFIDEIHRFNKAQQDAILPYVEDGTIILIGATTENPSFEVNPALRSRARVFVLESLTDEQIGVIVDRALTDAERGLGALNVLLAADARGYLINMSNGDARTALNALEAAALAKSPGIGGKRLLTVDDIRDALQSRAVQYDKNGELHYDAISALHKSVRDSDPDAALYWLGRMLDGGEDPLYIARRVVRMAIEDIGMADPHALPLTIAAQQAVHFLGQPEGDLALAQAVVYLAQAPKSNAVYVAYAAALNDVAETRNEPVPLHLRNAPTALMKRLGYARGYKYAHDDDDAQAETRNEPVPLHLRNAPTALMKRLGYARGYKYAHDDDDAQVEQEHFPPNLRGRRYYEPTGRGFEATVRERLAWRDARASHGTAKGVSREERTRSATGQNHTPSDLDPQALAGEEPQIPADDVAETRHVSRSPSRRRSK
>NC_009767.1|WP_012119604.1|1390594_1391752_-|FAD-binding-oxidoreductase
MPPQTADVVIIGAGIIGASIAYHLAVRGCTNVVILEKEETEISGSTARSAAGVRHQFSTEVNIRLSLYSIERLKHFTDEVGGHSGLQQIGYLFLIDNQTDWETYRANVALQRSLGVRVELLSPEEAGRFIPGMRTDDLIGATFGPDDGFCDPHGIAIGYLNRARELGVALERATPAIGIRVVGDHVAGVETPTGVINCPIVVNAAGPWAGEVGMLAGLEIPVRPYRRCIYVTEPFPAIPGPIPLTIDVGTGFYMRKEHENVLFGKSNYAEPPGYNLAVDWEWLDTVLEAGLRRFPILERAGLAEKLCWAGAYEITPDHMPILGKHPELEGYVDASGFSGHGIMHAPATGLLIAEEILDGRAHTIDIDPLRINRFRGVLRRELNVI
>NC_009767.1|WP_012119603.1|1390001_1390598_+|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MLTIPHLALILIAYLAGSIPFSLLVARARGVDLRVAGSGNVGAANVWRTCGFGAFLLALSGDMLKGALPTFAAQMLNVPPLAVVTVGAAAMLGHARSIFLGFRGGKAVATGGGALLAMAPLVALAGLAVWGATFSIVRISSVASLAAAAACAVVAAVFFAQGALPMTYALFVWGAVVSILLLHRANIRRLRAGAENRF
>NC_009767.1|WP_012119602.1|1389314_1389971_+|transcriptional-repressor-LexA
MRSSDQLSARQRDILAFIEAFTQEHGYPPSIREIQDGLHISSTSVVAYNLRALESKGLIDRDGRVSRGIKLKNMLPVALNPARGGRVPLLGVITAGQPLPNPEDTSTAAVEMIEVPPDVAPPEKLQDVYALKVRGHSMIDALIDDDDIVLLRYQETAENGQMVAVRIEDDNAVTLKRFYREGDKVRLQPANVTMEPIYVDATKVHIQGRVVGVMRSMW
>NC_009767.1|WP_012119613.1|1404005_1405415_-|MFS-transporter
MVEETFSSSPALPSGIWSAGRRMLTVGLVLIIVATAFEMLAVAATMPATARELGGLAWYGWAFSAFMLANMVAATVAGPEADRRGVAVPFITGTLLFVAGLLIAGLAPTMPSLIIGRAVQGLGSGIIGAVVYIIVGRGYEADARPRMLAIISSAWVVPGMVGPGLAGMITEHIGWRWVFLGLIPLPLVAALMALPSLQRLAPAQRSFDTHDYRTRSNEIRMALVLATGAAMTISGLGWLIAAPLAGIALIAPSIIIAVVALRYVLPPGTLRAAPGLPAVIATMGLLNLSFFGVDAFVPLTLTAIRGLSVVTAGLALTAATLTWTAGAWMQERLVRRHPPGSIAAAGLLVMLIGIGATTTTIAPVAPPLLSIATWGIAGCGIGLAYSALSLAMLQNAASGHEGRASSALQIAGQLGTALGAGVGGVIIGSGEQGQTVEAGRVALHFVLMSLLAGLAILTAHRVHAANRRD
>NC_009767.1|WP_012119614.1|1405754_1408355_+|DUF4157-domain-containing-protein
MNRRMQRKPSSTEPSSLSLSHVSHPALAPQNAIDRGQPAPDANQTGAMPGGHTFDSLQIGVNERQPPSSAIMPSTSQHLFDDLRARASRATNYDLSRVPIHCDSPLASAGGVEALTAGQEIHVAPGQYRPEISHGAHVLLHELAHVVQQGSGAARDAADPDRYHRLEQDAETTARRAAHLDSSAPATGLRALAPPTPTFPQAFDPRYHRQATVHGLIGSGFSAEEIGQIYAANWERDFSQAHPALANIVLTWKALKLAAFNQEPLDPAIDRFNQAVDTLIGMIPDRVSELANYQSYGGYNFYEHMDNPAGEEALRGDSARSRANREDLLVIPEGERIPQYMVDSREYIKAQLFRAAQSYRGDMRGQSAEGTAEAFRSRAAELEERMPGAPVARGGLRTTAVAQETAIQVANTPLQEIIFEDDTITVPRGTGNGADEGAALSTSGPAFHAEVDRRFWDQTGYKVNQRLDPNLPEDQPYVRIWLRIRNQVRAERQAALREREARTITMPAETIRGTVPRGPTGRWGSDGADAMGRAGHALEDFFAHSNFVELAIGQPAPTLLYDPETGGVRQVEGQLGTGSFGENDKNHSLAHKIRALADEIESEMPLVNRVAGRTNVDPTPEQVRVGSEAPPVPHSHDEDAHEGKPGLFDWIKAAGGTGLRAAGRIIGGGVLAGAAVGGVAGAIGGGVIGAKIGALLGPIGVIGGAALGGLLGGIAGFFASGGMEGMRTRIKETFRDVIATPQGIAMLRRIAETLERMTRANEEAGSHTALAKDQPGHDDSPLGRLRTIKFELAQELAAAADRMILGGMRQVFDAPSPESANVLLHDIYAQLDALIAPPGDHPLQHLIDHRREEAIQALEAYQTHSH
>NC_009767.1|WP_012119615.1|1408623_1409376_+|type-I-methionyl-aminopeptidase
MSVVLHTRQQIALMRAAGRLVAETFEVLREHVRPGVTTRELDRIAEQFVRKHGAIPAYKGYRGFPATICVAINNVVCHGIPGNERLKEGDIIGIDIGVRLNGWYGDACITVPVGTISPEAQRLLDVTEEAMWRGIRAARGGARLGDIGAAIQTYVEANGFSVVREWTGHGVGQLLHEEPTVLHYGKPGTGMRLRPGMTFTIEPMVNAGRPEAVLDKTDGWTVRTADGSLSAQFEHTIAITEGEPEVLTLP
>NC_009767.1|WP_012119616.1|1409380_1410574_-|cell-division-protein-FtsZ
MIDYTSLSQAAENFAVIKVVGVGGGGSNAVDRMVDEGVHGIEFITINTDAQALLHSRASTRIRIGDKLTKGLGSGGNPVIGQKAAEETTEEIYEALKGADMVFITAGMGGGTGTGASPVIASIAQDLGMLTVGVVTKPFSFEGNHRRKTAEQGIEQLRPMVDTLIVIPNDRLLQTASKNTSMLQAFQMADNVLRQGIQGISDLITQRGLINVDFADVKTIMARQGSALMAIGIGSGDNRMVDAVNEAIASPLLEVSIDGAKGVLFNVTGGEDLGILEVYEAADIVAKAVDPEANIIFGAVIDPTFPPGQVKITLIATGFDASRPTDARKRIYMSGAQQQQPAQPKRDMAYAEPHPPAAPQTAATRPQPPQPARSQGAHISPDDLDIPPFLRNRRKNG
>NC_009767.1|WP_012119617.1|1410591_1411836_-|cell-division-protein-FtsA
MAHRTIVGIDVGTTKVCTIVGQVYDNGRINVLGVGLTPSKGLDKGVVVNIDDAVNAIATSIEKAERLSGYRISAAFVGIAGRHIQSLNSRGVVAVARSDHEITRHDVARAVEAAQAVAIPTQREVIHVIPRAYVVDGNEGIRDPIGMSGFRLEVETHIITGEIMAIQNLIKSVQKTGVEIDDLVLQPLAAGEAVLSADDKDRGVVLVDIGGGTTDIAVFAQGGIWHTSVIPVGGNHFTNDIVIVQQTPHNTAEYLKLKYGAAIAEETEEPDVIEAEGFAPGERQQISRHMLNQVLQARAEELTELIYNEIRRSGYEGLLPAGIVLTGGTAQLPRLDELMRDMLGIPVRIGAPTDLTGLADTLNSPAYATAIGLLRWGMRHGMSGFHSGGGPPPDHGGWVSTYERFKRWLKEFLP
>NC_009767.1|WP_012119618.1|1411853_1412681_-|FtsQ-type-POTRA-domain-containing-protein
MRNDLHYNQPNTRARIAARRNRRRNAVSAMPGLRRAIGGWLASGRIASLVLFLASLGGLIAIAVSPQFVVRRVQINGAQILDTADIEEMAGVTGASIWLVQTDNVEARLAQNASIERVEASLILPDILTINLAERQPNVRWQVGDIRYLVDAEGRVLGPDTATFVTDTLIVEDRSGRTIEPNDRIDPDVLLLVRALALRLPNEAGVTPATISWDIEHGVMVTTADGRMIVFGRKERLDEKIEILRFLTIQEPTEYTWLDLRPATPYYRNDTPPQP
>NC_009767.1|WP_012119619.1|1412673_1413789_-|D-alanine--D-alanine-ligase
MTRKVRVGVLFGGQSGEHEVSLVSARAVMDGLDPERYDVTPIGITKHGRWIIAPDAHTRLLAQADPAKLPGGSSAGAADAADGVDDVETTDPLTLMVAGEQSPLKTLDVVFPVLHGPMGEDGTVQGLLELMEIPYVGCGVMASAVGMDKAMTKVAFSGAGLPVLPWLLIRRREWEREPAHVLDWVEQRLTYPMFVKPANLGSSVGISKVTGRAALARGIAEAAAYDRRIVVEQGIPAREIEVSILGNNEPEASVPGEVVPSGEWYDYEAKYLSGASKILIPAPITLELAARVRRLAVQAFKAIDGAGLARVDFLLNRETGDLYLNEINTMPGFTPVSMYAMMWEASGLPYTQLLDRLIELALERRGRGRYA
>NC_009767.1|WP_012119620.1|1413827_1414715_-|UDP-N-acetylmuramate-dehydrogenase
MQYLEYEPLAPYTSWRIGGPTRYFVQVASVAEMIQALTWAHQRDLPIFVLGGGSNVLIRDTGFNGLVMRVRAHDMRLEINGDEARAIVEAGAPMAGTARRLARQGWAGLEWAEGLPGTIGGALYGNAGCYGSDIATVLERAWVLVDGEPQEWPTERFVYGYRTSVLKQIRTDSMAWRDQPIILAAAFRLRRDDLTALAQRMERTSLERRSKTPWGASCGSVFKNPPTESAGRLIEAAGLKGRRIGNAEIAARHANYIINLGGASSDDVLRLIDLARERVLALTGIELELEIQIVG
>NC_009767.1|WP_012119621.1|1414718_1415996_-|tetratricopeptide-repeat-protein
MTDESTPAFHRRVAEELEARYGSDPRAPAGWREIQTWHWEQAGAYTSAIETALTITETRITRLDFGGARQWTERVLTLLERIDVKDRHPYELRACALALAVLEFGGQYREGLEYARRMLRAAQRLNNTEAEARALLGVGRMQRELGQLAQSEAALQSVRSLASRDDLSDLEAEARLHLAKVHQLQGRHLEALQELQLAREEHENDDDKLKLARVLTGIGDVYRVLGAHQEALTFYTRALSLEQGRGSLIGQAILKDKLALVLLNQQKPSDALVSAEESLDLRRRINDVVGQARSYIVIGAVMSRLGRHEQAMESYRRAYELQELTQNPRGQCIALIHLGDAACALRQPQAALLHYERALALARRDRDQIGIARALERLGDLHYAQEQSVQALARWNEALRIRETLRHVDEADALRNRIRAIQPAE
>NC_009767.1|WP_012119622.1|1415992_1417423_-|UDP-N-acetylmuramate--L-alanine-ligase
MHYHIVGIAGAGMSAIAHILLDQGHTVSGSDLQQNTLTAALEQRGARIRYGHEPAFVGDADRLVATSAVQDEHIELVEARKRGIPVLRRADLWREWSHGRQVVAVAGTHGKTTTTALIALMLTRAGIAPGFLIGGETPDLGVNARWGNPAAPLVVEADEYDRTFLALTPDIAIITNVEWEHVDIYPSPDEYEAAFRTFARQVAHPQRLIVCGDNAGARRVVGHPDAQQYGIEEAIARNPASCRLALMDWMAANVRYDGSMTHFDLWRYDRRTCGTRLEGMYTMRLVGDHNVQNALAAIAAATTLGIDRTAIGAALAEYRGARRRFDIKGEVNGITVIDDYAHHPTEVRATLAAARARFPQHRIVVYLQPHTFSRTYAMLDNWTHAFDAADIVRIGDVYPARETGEPRAAARALAGRIAHPDVEVVGDVATATATITALLQPGDLLLTLGAGDGYRVGEMALLALGQADDQSESSET

Crispr_ID: NC_009767_30

• CRISPR_ID: NC_009767_30
• CRISPR_location: 1451175-1451839
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 12 spacers

Consensus repeat of NC_009767_30

Consensus_repeat	Method
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCNC	CRT

spacers of NC_009767_30

>30.1|1451207|19|NC_009767|CRT
CAGGCGGGATAGGTGGAAT
>30.2|1451258|18|NC_009767|CRT
AGGCGGGATAGGTGGAAT
>30.3|1451308|18|NC_009767|CRT
GGCGGAATGAGGGAGGAT
>30.4|1451358|18|NC_009767|CRT
AGGCGGGATAGGTGGAAG
>30.5|1451408|19|NC_009767|CRT
CAGGCGGGATAGGTGGAAG
>30.6|1451459|19|NC_009767|CRT
CAGGCGGGATAGGTGGAAT
>30.7|1451510|18|NC_009767|CRT
AGGCGGGATAGGTGGAAT
>30.8|1451560|46|NC_009767|CRT
CCCAGGCGGGTCTGTGACCCGCCCCCCCAGGCGGGATAGGTGGAAG
>30.9|1451638|19|NC_009767|CRT
CAGGCGGGATAGGTGGAAG
>30.10|1451689|19|NC_009767|CRT
CAGGCGGGATAGGTGGAAG
>30.11|1451740|18|NC_009767|CRT
GGCGGAATGAGGGAGGAT
>30.12|1451790|18|NC_009767|CRT
AGGCGGGATAGGTGGAAG

CRISPR arrays and Neighbor proteins around NC_009767_30

CRISPR arrays

The CRISPR arrays of NC_009767_30

>merge|NC_009767|30|1451175-1451839|CRT
TAGACAGGGGCGGGTCTGTGACCCGCCCCCCCCAGGCGGGATAGGTGGAATGGGGAAGGGGCGGGTCTGTGACCCGCCCCCCCAGGCGGGATAGGTGGAATGGGGAAGGGGCGGGTCTGTGACCCGCCCCCCAGGCGGAATGAGGGAGGATGGGGAAGGGGCGGGTCTGTGACCCGCCCCCCCAGGCGGGATAGGTGGAAGGGGGAAGGGGCGGGTCTGTGACCCGCCCCCTCCAGGCGGGATAGGTGGAAGGGGGAAGGGGCGGGTCTGTGACCCGCCCCCTCCAGGCGGGATAGGTGGAATGGGGAAGGGGCGGGTCTGTGACCCGCCCCCCCAGGCGGGATAGGTGGAATGGGGAAGGGGCGGGTCTGTGACCCGCCCCCCCCCCAGGCGGGTCTGTGACCCGCCCCCCCAGGCGGGATAGGTGGAAGGGGGAAGGGGCGGGTCTGTGACCCGCCCCCTCCAGGCGGGATAGGTGGAAGGGGGAAGGGGCGGGTCTGTGACCCGCCCCCTCCAGGCGGGATAGGTGGAAGGGGGAAGGGGCGGGTCTGTGACCCGCCCCCCAGGCGGAATGAGGGAGGATGGGGAAGGGGCGGGTCTGTGACCCGCCCCCCCAGGCGGGATAGGTGGAAGGGGGAAGGGGCGGGTCGCAGACCCGCCCCCCC

>NC_009767|30|3|1451175-1451839|CRT
TAGACAGGGGCGGGTCTGTGACCCGCCCCCCC	CAGGCGGGATAGGTGGAAT
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCCC	AGGCGGGATAGGTGGAAT
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCCA	GGCGGAATGAGGGAGGAT
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCCC	AGGCGGGATAGGTGGAAG
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCTC	CAGGCGGGATAGGTGGAAG
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCTC	CAGGCGGGATAGGTGGAAT
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCCC	AGGCGGGATAGGTGGAAT
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCCC	CCCAGGCGGGTCTGTGACCCGCCCCCCCAGGCGGGATAGGTGGAAG
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCTC	CAGGCGGGATAGGTGGAAG
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCTC	CAGGCGGGATAGGTGGAAG
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCCA	GGCGGAATGAGGGAGGAT
GGGGAAGGGGCGGGTCTGTGACCCGCCCCCCC	AGGCGGGATAGGTGGAAG
GGGGAAGGGGCGGGTCGCAGACCCGCCCCCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119648.1|1452777_1453563_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119643.1|1444326_1445502_+|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl|CDD|225118
NC_009767.1|WP_157042564.1|1461534_1461678_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119654.1|1458336_1459848_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119646.1|1451897_1452251_+|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132914
NC_009767.1|WP_012119641.1|1440472_1441066_+|Holliday-junction-branch-migration-protein-RuvA	unknown	unknown	gnl|CDD|184760
NC_009767.1|WP_012119636.1|1433176_1434892_-|ATP-binding-protein	unknown	unknown	gnl|CDD|379114
NC_009767.1|WP_012119635.1|1431881_1432316_+|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|225293
NC_009767.1|WP_012119651.1|1454780_1455854_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_009767.1|WP_041331730.1|1437081_1439859_+|copper-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|319783
NC_009767.1|WP_012119644.1|1446960_1449102_+|hypothetical-protein	unknown	unknown	gnl|CDD|377001
NC_009767.1|WP_012119649.1|1453562_1454258_+|HAD-hydrolase-like-protein	unknown	unknown	gnl|CDD|319809
NC_009767.1|WP_157042785.1|1452303_1452681_+|ATP-binding-protein	unknown	unknown	gnl|CDD|379279
NC_009767.1|WP_012119655.1|1459860_1461105_-|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|182528
NC_009767.1|WP_041331745.1|1455920_1456643_-|polyprenol-monophosphomannose-synthase	unknown	unknown	gnl|CDD|133062
NC_009767.1|WP_012119638.1|1435570_1436737_-|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173847
NC_009767.1|WP_012119634.1|1431472_1431961_+|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|376187
NC_009767.1|WP_012119650.1|1454374_1454533_-|Flp-family-type-IVb-pilin	unknown	unknown	gnl|CDD|226366
NC_009767.1|WP_157042563.1|1441222_1444330_+|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|274368
NC_009767.1|WP_012119640.1|1439990_1440476_+|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|239645

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119643.1|1444326_1445502_+|SpoIIE-family-protein-phosphatase	gnl|CDD|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	5.00318e-44
NC_009767.1|WP_012119646.1|1451897_1452251_+|STAS-domain-containing-protein	gnl|CDD|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	9.323e-29
NC_009767.1|WP_012119641.1|1440472_1441066_+|Holliday-junction-branch-migration-protein-RuvA	gnl|CDD|184760	PRK14604, ruvA, Holliday junction branch migration protein RuvA.	9.98526e-111
NC_009767.1|WP_012119636.1|1433176_1434892_-|ATP-binding-protein	gnl|CDD|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.53305e-14
NC_009767.1|WP_012119635.1|1431881_1432316_+|DUF86-domain-containing-protein	gnl|CDD|225293	COG2445, COG2445, Uncharacterized conserved protein [Function unknown].	3.78004e-24
NC_009767.1|WP_012119651.1|1454780_1455854_-|sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.01355e-44
NC_009767.1|WP_041331730.1|1437081_1439859_+|copper-translocating-P-type-ATPase	gnl|CDD|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_009767.1|WP_012119644.1|1446960_1449102_+|hypothetical-protein	gnl|CDD|377001	pfam03170, BcsB, Bacterial cellulose synthase subunit. This family includes bacterial proteins involved in cellulose synthesis. Cellulose synthesis has been identified in several bacteria. In Agrobacterium tumefaciens, for instance, cellulose has a pathogenic role: it allows the bacteria to bind tightly to their host plant cells. While several enzymatic steps are involved in cellulose synthesis, potentially the only step unique to this pathway is that catalyzed by cellulose synthase. This enzyme is a multi subunit complex. This family encodes a subunit that is thought to bind the positive effector cyclic di-GMP. This subunit is found in several different bacterial cellulose synthase enzymes. The first recognized sequence for this subunit is BcsB. In the AcsII cellulose synthase, this subunit and the subunit corresponding to BcsA are found in the same protein. Indeed, this alignment only includes the C-terminal half of the AcsAII synthase, which corresponds to BcsB.	7.07832e-56
NC_009767.1|WP_012119649.1|1453562_1454258_+|HAD-hydrolase-like-protein	gnl|CDD|319809	cd07506, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.70289e-36
NC_009767.1|WP_157042785.1|1452303_1452681_+|ATP-binding-protein	gnl|CDD|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	6.35361e-16
NC_009767.1|WP_012119655.1|1459860_1461105_-|FtsX-like-permease-family-protein	gnl|CDD|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	6.34429e-67
NC_009767.1|WP_041331745.1|1455920_1456643_-|polyprenol-monophosphomannose-synthase	gnl|CDD|133062	cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.	1.55274e-108
NC_009767.1|WP_012119638.1|1435570_1436737_-|acyl-CoA-dehydrogenase	gnl|CDD|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	3.40859e-177
NC_009767.1|WP_012119634.1|1431472_1431961_+|nucleotidyltransferase-domain-containing-protein	gnl|CDD|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	1.52305e-22
NC_009767.1|WP_012119650.1|1454374_1454533_-|Flp-family-type-IVb-pilin	gnl|CDD|226366	COG3847, Flp, Flp pilus assembly protein, pilin Flp [Intracellular trafficking and secretion].	6.22507e-08
NC_009767.1|WP_157042563.1|1441222_1444330_+|PAS-domain-S-box-protein	gnl|CDD|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	3.29624e-69
NC_009767.1|WP_012119640.1|1439990_1440476_+|NUDIX-domain-containing-protein	gnl|CDD|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	1.94411e-21

Protein sequences

>NC_009767.1|WP_012119644.1|1446960_1449102_+|hypothetical-protein
MHTFRRCQAHTLLSMARMLLILSVLVFTVAPSTPIAAAQAQTDADTYRFADLGYGDRTARTMYGNLDYFFPVPAGEEPLEGARLDLVYSHSPLLDSERSTMTIVVNGLSVQSVRLTSDTRARATLTVPLPLSVFGGDGFFVQVRFHMRLTRDECEETRNPALWATIHGDSRLTLPTQSISAYRLDQFNWLFAPPPDHRPPLALVIPAEPSPEELEAAGLVAFQLGRRAAAIRAEPRLEVFTTPPDRAGVIVGSAPALAAMLPWGVVDWDGRAVTMAGIPISTDHGVLALAESSVPRLLVSGATPSAVRLAAQTLNDPDRRTLLDGAYVAVTDAPVAAPSSLPWANGAASFAQLGVSSRTVIGPGEHRIDLAFTRPAGWQLHDGSVLTLDVEATPAVRQETSWIAASVNGIDLGAQPLKLTEPNPHRYTFALPADLLTATLDGRAVRYLDLTVRLFLDPPETGCVVVDGDSLRATLLPTSAWRLPHSVSSAFDLGRFPAPLLSVDTSLPLIIVLPQQPAAAERAVALQLLAALGRWADADGLPPPRLVTVDQVNERSGRHLILIGGAERNTLSAEAIARQPDRFAARQTVVYRPNETAQGRLVLGPSPWQRDAGVLIIDGATPDDLAIGVTALERRETLERLRGPVALIRQDAPPQTGPAAAAPPSSLTPQIETSLLERLAGWQIAGAVLLGAFLSALVILLTIQVRGRTRRRG
>NC_009767.1|WP_012119643.1|1444326_1445502_+|SpoIIE-family-protein-phosphatase
MNDLFEQISGQTPSVRHILVVDDDPDINRLLRARLTARGYDVSTAASGEEALTLLADSPADVIFLDISLPGMNGLQTLAEVRQRRLDAAVIMTTAFGSEQIAVEALRQGADDYLRKPFESDEFRRVLERTVQRLELERQNRVLRQQLEAHHRRLLSEMARAAEVQARLLPQMAPVLPGFQLAAECIPARDVGGDFYDWQQPAPHVLSFWLCDVMGKGLDAALLMATVRAVMRAVVRSSPPAEAMRYVAAALNDDLIQSGRFVTLFLAQLDAGSGRLAFIDAGHGLAFVRRANGSVETFDTPRGLPLGILPYEQYDQREVVMNPGDALVVYSDGLIDARVDLNLTPQALADQLCGAASALAMLDRLVTLLAPVQTPPDDMTLLVLYRKTDQG
>NC_009767.1|WP_157042563.1|1441222_1444330_+|PAS-domain-S-box-protein
MNTTHAASSSAQVIRRIIAGFALALGSITVIALISYGWTQYILANERDRFNLLAANSLQLIRLQQIALAAEQVMDTSDPEIAAQARETLSAAIDEMAQSQQELSRMVATLPPDDPLWRLYADPATAFDARVQEFLARARRLRDTAPDPQHPDLQVIRRMALYDLPPLFRNASRLYVDARRSLLQTLDIMHATFLGVTLLALAFEGIFIFRPMVREARGYITQRDVSESRLRARERVTRALYDITSTSQLDHLQKVQALLEMGCDYFHMPVGVLTRIDGEELEIVAVRDPGHRMKPGERFPLADRYCAAVLDAGAPVIIDHASQSGWNDHRCYRLTRMEAYIGAPVQVRGTTAGTLCFASAMPRTTPFTDGDYDLIRLMAQWIGSEQDRLQTEAALRESEERFALLASVTTEGVIISEQGMIVDANAAAGTLFGVPPERLRGMPVFEFTTPEGREKVARALTTGYDRPYEVLARRIDGTLFPAEVTGRNIPYHGRTARVTTIRDISRQRLAEAALRASEERFRQLAENVNQVFWMSTPSLDQILYVNPAYERIWGRSCDSLYAQPSSLFEAIVPEDRERALALHRAEYARGYSIEFQILHTDGQQRWILTRAFPVINEAGAVYRIAAISEDVTERKQAEAELRAAMTALEVQYQTADRAQSELRAILDASSEVIALLAPDGAFLTVNRRFCDIFGVPADQVLGRRLIDMRAEIRWFFGDADEVYERMLSALQDAQDVFREQVVQLRPQHRELAIFSAPVWTANQVHLGRLYVFRDVTHERAVERMKSEFVAMVSHELRTPLTSIKGYIDMLLDGDAGPLAVEHQELLQIVKSNADRLLLLINDLLDMSRIEAGKLMLHRAPLDVRPLIRQVATALRPQLDAKHQRLNLDLSETPPDDAPPLMFGDAARVHQILTNVLSNAIKYTPQGGEISVRLSVEPPWMCIAVQDTGIGLTPEEQERIFDRFYRVRNRATREASGTGLGLAITRSLVDLHQGRITVESEAGRGSTFRICFPLLTSLDGINDDEALAQVSTGELT
>NC_009767.1|WP_012119641.1|1440472_1441066_+|Holliday-junction-branch-migration-protein-RuvA
MIASVRGTLIAVAADHVVIETGGIGWMIYAPRQVLAAPGDIGAEMRLFTCLIVREDALTLYGFKTVEQRQLFETLLSVTGVGPQAALNLLSSGTTDELRLAIATGDVARLARTPRIGKKLAERLVLELKGKLDIKGLPVAPGVSPAVAAVNAELSEMLVSLGFSSAEASTAIAALPPDAPLDLEERLRLALRYFGAR
>NC_009767.1|WP_012119640.1|1439990_1440476_+|NUDIX-domain-containing-protein
MVGKPSLLAHHKPIYAVGAVAYRYDARGRLQVLVIKKRNGYWTLPKGGVRPGEEHATALLRELREETGLVGIVEDEVAQVQYITPRRRLPRRKIVTYYLVRVALDAIAIPGAHPGEVIEQVRWVRPQGAQRRVKRKRIRNIIARAETCLRARNDQSVTESQ
>NC_009767.1|WP_041331730.1|1437081_1439859_+|copper-translocating-P-type-ATPase
MPEQTIHLAVTGMTCASCSARVAKALKKAPGVTDATVNLASEQAEVHFDSSLVTPDRLITAVEEAGYGVITEHVDIPITGMTCASCAARIEKALRRVPGVIDAAVNLASERATVTFTPADVTWSDLVAAIEDAGYGVIDQRTAADAGEDGEAAARARELANRRRTLTVAVVLTAPLFLLSMGRDLGLIMPWLIGAGAEMARSMSGPLHEMMNHIAARDDLLNWLFMILATPVQFYAGRDFYVHAWKALKNHRTATMDTLIAVGSSAAYFYSAALMVTGMAGHVYFETAAVIITLILVGKYLEARAKSQTGAAIRALIGLQPKMARVVRGGREVDIPAADVRRGDIVVVRPGEKIPVDGVIISGSSAVDESMITGESMPVEKREGDTVIGATLNRSGGFQMRATRVGRETALAQIIALVQQAQGSRAPVQRLVDQVSAVFVPIVLLVALLTFLGWFFIGGTGFTQAMIFAVAVLVIACPCALGLATPTAIMVGVGTGAAHGILIKNAESLERAGKVQTVVLDKTGTVTVGKPAVTDIVVHATDALASVVQSAPLIQTQADDSVHPNGSQDVVRQTSDATAMATIHGISVAAADLGDRRADLEQFLKSVGDGDLPDAHPLSAAVTRVAQQRTELLRLAASAESRSEHPLGEAIVRAAQDAGISVVQPERFEAIAGHGVIALVEGRTIVIGNPALMLDRGIDTSALDAHVARLQSEGKTAMIVAVDRMAMGVIAVADTVRHTSRAAVETLHRRGIDVLLITGDNRRTAEAIARQAGIDRHKVYAEVRPEDKARIVREVQEGAGMRRIVAMVGDGINDAPALAQADVGVAMGSGADVALETADIALMRGDLHGVAQAIDLSRRTLQTIRWNLFWAFIYNVLLIPVAAGALYPFTGWQLNPMLAAGAMAFSSVFVVTNSLRLRRALSVER
>NC_009767.1|WP_012119638.1|1435570_1436737_-|acyl-CoA-dehydrogenase
MEYDLPEDLRLLRQTVRDFANKEIAPIAREIDEEERVPFEMLRKAADLGLLGVPFPEEYGGSEAGITGYCVLLEEVNRKCASTGTIIGAHTQLCSMSIHLAGTPDQKERYLRPLIEGRMWGAWALTEPNAGSDAAHIRTTAVRDGDSWVLNGGKMWITNGSFADVIVVFANTDPSLGPRGITAFIVEKGFPGFKVGKVEPKMGLRASHTASIFFEDCRVPAANVLGEVGRGYALALQTLDIGRCGLGAACLGAAKEAYELSLKYAVERQQFGRPIADFQAIQFKLADMAVKIYTMEQIVYDCAKKVDRGETARLESSIVKLYCTDALAWILDEAIQIHGGMGFSRELPLERMYRDARVFRIYEGTNEIQRYVIASELLKTVGHKVRLY
>NC_009767.1|WP_012119636.1|1433176_1434892_-|ATP-binding-protein
MLTSLTIRNFKLFPDVAIDLGERVVFIGPNNSGKTSALQALALWDVGVKRWLERRGSGTIPAERAGVTINRKDLLAIPIPAANLLWRDLRVREGERHDGKPRTRNVRIEIGVKGSDEQQWECRLEFDYANEESIYCRPPVGPDNARLAVPAHLKNLQVAYLPPMSGLAAREDRLEMGSIRVRLGEGRTAEVLRNLCWQVVQSENGDQKWQEICESIERLFGSRLLPPQYIAERGEITLTYRTRSGTMLDISSSGRGEQQTLLLLAHMAVHTGAVLLLDEPDAHLEILRQRQIYDVLTRQAERTKSQLIATSHSEVVMNEAAQRDVVVAFVGRPHRIDDRGSQVLRSLRDIGFEQYYLAETMGWVLYLEGSTDLAILRAFAERINHPARSVLERPFVCYVANQPRKAQEHFYALREAKPDLVGIAIYDRLARGVPDDPHLRQHMWSRNELENYLCQRETLLTFAVSKGEESEGALFTASWRDAMAQAIQEIEQALRLLGKDPWGPDIKASDEFLTPLFQRFFQIRDRPNEMNKTNFHVLAAFVSPEAIDDEIRRALDAIGEVAQMARPRVDS
>NC_009767.1|WP_012119635.1|1431881_1432316_+|DUF86-domain-containing-protein
MSVEFSGIERRLDELSERLARLTPLRERPRSDFDVDPYLRDIAERNLEVAAQRCIDICHRIIALEGARKPRDYREAIVRMGELGVLPPEFAANLAPIAGFRNILIHEYLLIDRDEVYRNLANLDNLERFVTLIRNWLRRQGEKG
>NC_009767.1|WP_012119634.1|1431472_1431961_+|nucleotidyltransferase-domain-containing-protein
MFDIDLQTFQQRVAAIAATHLQVQLVYLFGSRAGGEFGPMSDIDLAAVLDREASIPHLRDELAYRFAEALNDGSVDLIILNQAPIELAYAVIAEGRALYQRSLVERIEYEADVMSRYGDYLPVLRAQRWDIVHGSGDERRVQRYREAFGRTQRAPGASDPVA
>NC_009767.1|WP_012119646.1|1451897_1452251_+|STAS-domain-containing-protein
MTLLSEPCDDGITIVRMDGRLDLVTAAQVKQQLTELVASGHRRLIFDLDRVSFVDSSGLGALISGLKVARQAGGDLRIARANQQVRTLLNLTMLERVLRPYETLEEARAGYSQIVAD
>NC_009767.1|WP_157042785.1|1452303_1452681_+|ATP-binding-protein
MIDRFWDDAARIDRLPSDRWRHLFTMALAEVAANGLRHAYPPDAAERPLRVRLRLFPDRIEALLIDQGVPYQPIASAPHALDDETDIALLPEGGYGLFIARSALESLRYRRTRSGYNCWKLVKKI
>NC_009767.1|WP_012119648.1|1452777_1453563_+|hypothetical-protein
MADTQTRRSATDLQSANASSSTTLAPRQRPTPLWGRSRNQTQAQADSGRPQRGSRLTSFWKALIITSFVINIVLLTVVLLLVGFIFQWRQQIASTAVQGQGFAADNVAELRSIVAGLQGATIRTTIPLDQPLPLKDAGVVVPVDQQTTVTLVEPVPLQLSGADIDLGNGNRLRANNIRLTLPAGTPLRIALKMDIPLDDVTIPVRLNVPVEIPLKDTELGPQFQRLGWLVDRLVGPLAPVLGLDPIPPAPPAPRYQPSQQP
>NC_009767.1|WP_012119649.1|1453562_1454258_+|HAD-hydrolase-like-protein
MRHKLILWDIDGTLLYSGGVAGEAMRAAMTRVYGRSSDNERRAYAGKTDQQIILETFPDRPAAELLSQLDVFTATYLDILSEWAEAFRTRGRVLEGVVDVLRRLRAEGVVQSLLTGNLAPVARLKLDLMGIAEFFDFDSGAYGSDSPRRIDLAPIAAARAAQRHGRVFAHADIVVIGDTPNDIACARAAGARAVAVATGPFSIEELRTHAPDAVLPSLADTGTALAAILAE
>NC_009767.1|WP_012119650.1|1454374_1454533_-|Flp-family-type-IVb-pilin
MVRSFFAKEEGQGLVEYALILVLIAIVVIGILTLLGNRVSQVFSQINSGLSR
>NC_009767.1|WP_012119651.1|1454780_1455854_-|sensor-histidine-kinase
MTDAPPSLKELYDKANADLEKARRELNEIEALLRQTSNEVEKLQQRELTVSNRLRDLDVNIDRYSKADVKNYYASAQEVQMRLLTMRSQLEQLQYRQQATKQRQSLLFELITALEPLLGVATPAGNAGGMVGSDQLIADIIQAQEKERLRISLQMHDGPAQSMSNLVLRAEICQRLLDRDPEMARAELGALKNAINATLQDTRRFIFDLRPMILDDLGLAPTLRRYVQQVSEKNKLEINLMVQNLEMRLPPHYEVAIFRFIQEALNNVIKHANASQARVLVSIRDDVGAARVIHVSVEDDGSGFHVGEVLSDDSGRRNMGIATLRQQVETLLRGEFGIESAVGRGTRVEAIIPLPAG
>NC_009767.1|WP_041331745.1|1455920_1456643_-|polyprenol-monophosphomannose-synthase
MSTDVALADCTVVIPTYNERENITELIQRILEMSRFRVLVVDDNSPDGTAAVVAELADDEPRVGLLLRPEKHGLGSAYVAGFRRALAEGAAFICEMDADFSHDPSYLPQLLAAAETRYDLALGSRYVPGGGTTDWGIIRQLISRGGNLYARAILGLPVMDATGGFRCYRRRVLETINLDDIQSNGYAFQIELVYRTMRAGFRIGELPIIFPDRRVGRSKMSRRIVLEALINVWRLRFRNL
>NC_009767.1|WP_012119654.1|1458336_1459848_+|hypothetical-protein
MPSTSALESVSERQTRLRPTLDQVYLVAALMLIALRPLLTPIPPHDFWWHMATGRVILESGTIPQVDLFSYTRAGEPFFNQGWLAQLLMALLHQIGGLPLIIVVQALVLTLAYGLLLRLCILRTNRVRMGAAILLLATLPLSFDNWTVRPQTYVFPLFAGFLTVLTEYRLGMTRRLWLLPILMALWVNMHGSFVLGFALIGIVFIGEAIRRWREQGVLGKTLDPSLVVWGAATALATLLNPRVAEVLGYVTNLLGSSQVTDLVTEWSPPTIRDINGAIFFLFVIVTALVMIYARSRPDLTDLLLFGAFLWLALGATRNIVWLGFVATPLLATQAATLLPPPSPRRFQGVPTMNAALIGLLAILLLIGSPWIKPALLPPDVGALLAKGTPVEATQALQALPQRPQRLFHAMSYGSYLIWAAPEQKVFIDPRIELYPYDQWRDYILLGQGADVEALLAKYAIDGMMLSIEEQQPLLEYARARPDQWREVYADDETVVLVTRNVQR
>NC_009767.1|WP_012119655.1|1459860_1461105_-|FtsX-like-permease-family-protein
MNLVETIRIALSSLSANKLRSALTMLGIIIGVGAVITLLALGGAIQTLVTRELQGLGSNLVFVFPGTNDPEQNRRVPPRLTNEDVAALADPLNVPAAAAVTPQLTRGALIVYAGAGFDGRVAGVTPNYPQVRNARVVSGRFFDQTELDLRSRVAVIGADVRASLFPDEDPIGKRIRINDVSFEVIGEMAPRGGNFGPSEDNLVFVPITTAQTRLFPPPPGAVSRIDVSVVYIQAVDERRIDDVIDQVTEVLRRRNGLTFQDNNFTIVTQQDLIASFGTITGALTAFLGAIAAISLLVGGIGIMNIMLVSVTERTREIGLRKAVGARRRDIRFQFVIEATMLSLLGGLLGIALGYALSALGTALLQGVAEGAEARVQLDAILLATLTSIAVGLIFGIYPAVRASRLNPIDALRYE
>NC_009767.1|WP_157042564.1|1461534_1461678_-|hypothetical-protein
MREDNDAESGQRSSYAVLPGGKGNSSQQMGEHGREALRKCIYVWRKI

Crispr_ID: NC_009767_31

• CRISPR_ID: NC_009767_31
• CRISPR_location: 1645928-1646037
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_31

Consensus_repeat	Method
CTTTAGCCCGCAGCGCCCTCGGGTCCGCTGCGCGCCCC	CRISPRCasFinder

spacers of NC_009767_31

>31.1|1645966|34|NC_009767|CRISPRCasFinder
TACGAAAAGAAGAACATCAAGTTTGTCATAATTA

CRISPR arrays and Neighbor proteins around NC_009767_31

CRISPR arrays

The CRISPR arrays of NC_009767_31

>merge|NC_009767|31|1645928-1646037|CRISPRCasFinder
CTTTAGCCCGCAGCGCCCTCGGGTCCGCTGCGCGCCCCTACGAAAAGAAGAACATCAAGTTTGTCATAATTACTTTAGCCCGCAGCGCCCTCGGGTCCGCTGCGCGCCCC

>NC_009767|31|27|1645928-1646037|CRISPRCasFinder
CTTTAGCCCGCAGCGCCCTCGGGTCCGCTGCGCGCCCC	TACGAAAAGAAGAACATCAAGTTTGTCATAATTA
CTTTAGCCCGCAGCGCCCTCGGGTCCGCTGCGCGCCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119803.1|1646803_1647322_-|VUT-family-protein	unknown	unknown	gnl|CDD|376842
NC_009767.1|WP_012119808.1|1653089_1654382_+|DUF1080-domain-containing-protein	unknown	unknown	gnl|CDD|368908
NC_009767.1|WP_041330306.1|1654996_1655797_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|224343
NC_009767.1|WP_012119792.1|1635032_1636448_-|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl|CDD|236447
NC_009767.1|WP_012119802.1|1646276_1646786_+|PspC-domain-containing-protein	unknown	unknown	gnl|CDD|377200
NC_009767.1|WP_012119805.1|1648777_1649881_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226359
NC_009767.1|WP_012119799.1|1641723_1642692_-|response-regulator	unknown	unknown	gnl|CDD|333815
NC_009767.1|WP_012119794.1|1637560_1639141_-|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl|CDD|236448
NC_009767.1|WP_012119806.1|1649904_1650288_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|211538
NC_009767.1|WP_012119810.1|1655811_1656309_+|YajQ-family-cyclic-di-GMP-binding-protein	unknown	unknown	gnl|CDD|377366
NC_009767.1|WP_012119798.1|1640559_1641555_-|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl|CDD|235617
NC_009767.1|WP_012119796.1|1639712_1640204_-|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl|CDD|172948
NC_009767.1|WP_012119793.1|1636475_1637348_-|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl|CDD|184515
NC_009767.1|WP_049768800.1|1656312_1657758_+|30S-ribosomal-protein-S12-methylthiotransferase-RimO	unknown	unknown	gnl|CDD|223694
NC_009767.1|WP_012119804.1|1647721_1648756_+|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NC_009767.1|WP_012119801.1|1644401_1645547_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119807.1|1650438_1652061_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119795.1|1639183_1639660_-|ATP-synthase-F1-subunit-delta	unknown	unknown	gnl|CDD|365949
NC_009767.1|WP_012119800.1|1642714_1644385_-|response-regulator	unknown	unknown	gnl|CDD|223715
NC_009767.1|WP_012119797.1|1640235_1640469_-|ATP-synthase-F0-subunit-C	unknown	unknown	gnl|CDD|349414

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119803.1|1646803_1647322_-|VUT-family-protein	gnl|CDD|376842	pfam02592, Vut_1, Putative vitamin uptake transporter.	3.34058e-13
NC_009767.1|WP_012119808.1|1653089_1654382_+|DUF1080-domain-containing-protein	gnl|CDD|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	2.59149e-05
NC_009767.1|WP_041330306.1|1654996_1655797_+|helix-turn-helix-domain-containing-protein	gnl|CDD|224343	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown].	9.82129e-29
NC_009767.1|WP_012119792.1|1635032_1636448_-|F0F1-ATP-synthase-subunit-beta	gnl|CDD|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NC_009767.1|WP_012119802.1|1646276_1646786_+|PspC-domain-containing-protein	gnl|CDD|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	1.66394e-20
NC_009767.1|WP_012119805.1|1648777_1649881_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	0
NC_009767.1|WP_012119799.1|1641723_1642692_-|response-regulator	gnl|CDD|333815	pfam00072, Response_reg, Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.	9.63601e-08
NC_009767.1|WP_012119794.1|1637560_1639141_-|F0F1-ATP-synthase-subunit-alpha	gnl|CDD|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NC_009767.1|WP_012119806.1|1649904_1650288_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl|CDD|211538	TIGR00026, Hypothetical_protein_Rv1261c/MT1299/Mb1292c., deazaflavin-dependent oxidoreductase, nitroreductase family. This model represents a family of proteins found in paralogous families in the genera Mycobacterium and Streptomyces. Seven members are in Mycobacterium tuberculosis. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. [Unknown function, Enzymes of unknown specificity].	7.32783e-14
NC_009767.1|WP_012119810.1|1655811_1656309_+|YajQ-family-cyclic-di-GMP-binding-protein	gnl|CDD|377366	pfam04461, DUF520, Protein of unknown function (DUF520). Family of uncharacterized proteins.	1.14458e-78
NC_009767.1|WP_012119798.1|1640559_1641555_-|F0F1-ATP-synthase-subunit-A	gnl|CDD|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	1.64131e-39
NC_009767.1|WP_012119796.1|1639712_1640204_-|F0F1-ATP-synthase-subunit-B	gnl|CDD|172948	PRK14473, PRK14473, F0F1 ATP synthase subunit B; Provisional.	7.0064e-75
NC_009767.1|WP_012119793.1|1636475_1637348_-|F0F1-ATP-synthase-subunit-gamma	gnl|CDD|184515	PRK14111, PRK14111, F0F1 ATP synthase subunit gamma; Provisional.	9.04939e-176
NC_009767.1|WP_049768800.1|1656312_1657758_+|30S-ribosomal-protein-S12-methylthiotransferase-RimO	gnl|CDD|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	4.86992e-160
NC_009767.1|WP_012119804.1|1647721_1648756_+|LacI-family-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.5043e-103
NC_009767.1|WP_012119795.1|1639183_1639660_-|ATP-synthase-F1-subunit-delta	gnl|CDD|365949	pfam00213, OSCP, ATP synthase delta (OSCP) subunit. The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.	9.40685e-27
NC_009767.1|WP_012119800.1|1642714_1644385_-|response-regulator	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.34003e-44
NC_009767.1|WP_012119797.1|1640235_1640469_-|ATP-synthase-F0-subunit-C	gnl|CDD|349414	cd18121, ATP-synt_Fo_c, membrane-bound Fo complex of F-ATP synthase, subunit c. Subunit c (also called subunit 9, or proteolipid) of the Fo complex of F-ATP synthase. The F-ATP synthase (also called FoF1-ATPase) consists of two structural domains: the F1 (factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons though the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts, or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Methanosarcina acetivorans.	8.90283e-17

Protein sequences

>NC_009767.1|WP_012119801.1|1644401_1645547_-|hypothetical-protein
MSLYVPSGASPLVTGALARIERRLPHPGEITVRVGQRVEPDTPVALAYIPAAPRIINLARILTIPPARVKRSLLHDIGAPIAQGAPLAQTGRFGKKKVLSPVSGVLASVDEATGYIAIVPDPERYELTANVPGVVMEIIPYEGVRIETPAAQVYGIFGIGASQYGVLQLMVTDPAEPITPDKINARFAYTIIIGGSTISATALQRAVQERVRGIIVGGIDEAELRAFLGVEGYAPWDVGPPHWRAPSSPHPAADLVLMVTEGFGNHPMSRPLFDLLASYAGKEALIEGTTHIWTDMRRPRVVIPLTTRAAGMPIDAPRPTVRPGAFVRVLHQPRLGQSGQVRTLSPAPQRLPSRVRAPAAEVVLEDGTITRVSAVAVEALN
>NC_009767.1|WP_012119800.1|1642714_1644385_-|response-regulator
MRQAIDTGSFTSLTNASPPRLLIVDDEQHMCDVCSRTLQRAGYDVMATIDPHVAIAALDSGQQFDLLLTDIKMPTMSGLDLAQIAREKDPEIAIIIMTGYASLENLHQSVRRGVADFLSKPFELEQLRLAVDQALRKRAIQQDNFRLRTLEQLLAVSEAFSATLELPELARIALDAMIDRSGFQTGFLLLGDESETLSQAVAHPHDARLTDAGQELAKRSFELRQLLYEHTALYGTRHTRRLHTALAVPLRAQGRVNGVVVLCDERSTTLRPGVQQGLMLLANHAGAALRNAALYQQLDEAYQRRQELDRLKSEFIAIASHELRTPLSIVLGYTMMVRDQVEGGQREYLQRVLEGAQRIKEIVDDMVNLRHIDTGEAQPQLAPLDLVGTIRQAVEHLRSSVELSGRTIVTHLPEMLPPILTDREKVVLVLNHLLSNAIKFTPAQGQITVTISVRPYADIEKMNSASISKPSAALRTLPWVIVDVADTGIGIPAREQMRIFDRFYQVGDSLTRERGGVGLGLALVRELIASLGGAVWVVSREGEGSTFSFALPFRQT
>NC_009767.1|WP_012119799.1|1641723_1642692_-|response-regulator
MTYRLVVVPGDSSELRALPGRFADAVEVQTLDTANDALWEVRNDPPGVIIANVDLPGMSGIDLAEILPNFGAPTRLVLWSRHADPQIARRVAGFGVQHVVSSDMALDDLCDLLYRELNEAATTTTQAAEPPPESTPEPPPPPAPPKETPVAASAPPTRPARPKAESLRQTEAAPARPAETGAPRQARRRDGPLVLTPEDQRAIRLRMEALDRDVGSKCIILADRAGMVLVETGLTIGLPTMVLLPLLSTSFSTAGQITQMLRETESSALYVHEGSHYDLYCFDIAQRFMLVIVFDKSGTPAKIGSVWVYAKRAIRDIQELLG
>NC_009767.1|WP_012119798.1|1640559_1641555_-|F0F1-ATP-synthase-subunit-A
MRNRILTVTGILLAVGIVLYIIGVRSTKLHISVAAEPVVCLGGARATLETCASGFPITNSLITTLIVLAIIIVAILAGTRGMQMIPRGFQNVLEVMVEAFYNFAQSVDRRNVAKFFPFCASAFFFILVSNVIGLVPGVGSIGVCVPTAEHKETAIVAPVADVTMAEEPAGASDFFASWPLACEKGTTLVPYLRAPSADLNVTLAWALISVGLIQYFGFQALGLGYLTKFFNFREGFMAALVGILELISEFVRIIAFAFRLFGNIFAGEVILVVMAFLFPYLLPAPFYAFELFVAFMQALIFSVLSLVFMSLATEAHGGHESHGHGETAAHS
>NC_009767.1|WP_012119797.1|1640235_1640469_-|ATP-synthase-F0-subunit-C
MTDDGLRLIAAALAVGIGAVGPGVGIGVIFSGALQAMGRNPEAEGTLRTYMFLGFALVEALFIFALVIALLIAFRIV
>NC_009767.1|WP_012119796.1|1639712_1640204_-|F0F1-ATP-synthase-subunit-B
MEKLGINWGLLIAQLINVVFVVWLLTTFLYRPILNMLNQRTNRIQEGLQDAERVREQLANAKRDYDAELAKARQEAASILAQAQERARAQAAEIIAQAHRDAEKIKSDTLAQAEQERQRMLGELKDRMAELVVLTAERVLNAELKANHDRLIEESLAELGKYN
>NC_009767.1|WP_012119795.1|1639183_1639660_-|ATP-synthase-F1-subunit-delta
MSASEAQVIARALFDSLTGAALQALHTATSINGEVTTERLLAALPADAPREVRNLILALGKEGNLDRLPAVVAAFEQMTRRGGARPLTGEVTSAVELSPQQRERITEQLKARYGPDLEVRFSVDESLIGGLIIRIGDQVLDTSLRTRMAAIQRNMMTG
>NC_009767.1|WP_012119794.1|1637560_1639141_-|F0F1-ATP-synthase-subunit-alpha
MMTVATTEELYQRLLKSIREGVDLQPKMVNVGTVIQVGDGVAKISGLEQAMASELLEFPPKAGRSEPVFGIALNLEKDAVSAIILGDYLGIEEGDQVNSTGRVISAPVGQALIGRVVNALGQPIDGKGPIQTTKYRPIERIAPGVITRKSVDTPVQTGIIAIDAMIPIGRGQRELIIGDRQTGKTAVAIDTIINQKGKGMVCIYVAIGQKRAQVAQIINFLEKYGAMDYTIVVSATASESAALQYIAPYAGCAMGEEVMENGVIIDGQEVRDALIVYDDLSKHATAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARLNEDYGGGSLTALPIIETQANDVSAYIPTNVISITDGQIYLETDLFNAGIRPALNVGISVSRVGGAAQTRAMRSVSDRLKIDMAQFRDLAAFAQFASDLDATTRAQIERGQRLQEVLKQPQFQPMPLEEQVVILFAGINGYLDDVPINQIGRFKSELVNYMRTAHPEVGKMIFENRLDRKFPSPEIRSAIEHMLKEFKQMSTFAEG
>NC_009767.1|WP_012119793.1|1636475_1637348_-|F0F1-ATP-synthase-subunit-gamma
MPSTREIRRRIRSVKNLAQITRAMEMVSASKMRRAQRNVLATRPYADRLLDVMGELTGRAVGMRRGTLLEVRPVVKGVALIVVTPDRGLAGSLVANVLRRASRFILDEQEKKHTVEVLAIGKKGRDFMVRTRQNLVAEVTKLGDYPRLTDILGIATNVINGFLSGRYDEVYVLYSQFVNTLVQRPTIKRLLPIDPPHEPAERMVDYTYEPSQEEVLRALLPRFVEVQLYQAVLEAIASEHSARMVAMRNATDNAKELQRDLTLSYNKTRQANITKEVSEIASGAAALAEM
>NC_009767.1|WP_012119792.1|1635032_1636448_-|F0F1-ATP-synthase-subunit-beta
MAGATGIVTDIIGVVINAKFPEHETPEIYNALEIRLENGKRLVAEVQQQLGGGVVKAVAMSSTDGMRRGVKAIDTGRPIAVPVGPGTLGRVFDVLGDPIDGEGPVQTTEYRPIHRPPPALEDQSTTAQIFETGIKVIDLIAPFTRGGKTGIFGGAGVGKTVIIQELIANVAKEQSGYSVFAGVGERSREGNDLIHEMKEARIDEKTRVFDKTVMVFGQMNEPPGARLRVGLTAMTMAEYFRDEGRDVLLFIDNIFRFVQAGSEVSALLGRMPSQVGYQPTLGTEMGELQERITSTKKGSITSMQAVYVPADDYTDPAPATVFSHLDATITLERSIAAKGIYPAVDPLASTSRILDPNIVGEEHYRVAREVQRVLQRYKDLQDIIAILGVEELSDEDKLTVARARKIERFFSQPFTVAQQFTGRPGKYVPIGETVKSFARLLAGEVDHIPEQFFLLQGGLDDVIQAYEASRR
>NC_009767.1|WP_012119802.1|1646276_1646786_+|PspC-domain-containing-protein
MDVSTPRLMRSRGDALIAGVAGGIARYLGVDSTLVRLIFVVLAFSGAGVLLYPLLWIIMPLERTPAPGRATNPAGREPFVDGERVQRLRSDPPTGTDGDADSEIPINNLNDRNPSHALPSARRTWQLGVILIGVGILALLSLLLGPAFGKLLFPMVLIAAGVLVLLRNR
>NC_009767.1|WP_012119803.1|1646803_1647322_-|VUT-family-protein
MRFIILYILAILAANLTADDILTVWALQFSLGTLFFGVIFTLRDLIHRQYDKTVVYATILAAVGVNVIAAAASFASPRIIAASAIALFLSELTDTEVYHALRHRIWIIRALSSNACSAPLDTLLFTMLAFYGVWSNDLIASVIVGDSLLKYAIAASAVGLGVTIRPHAQRVI
>NC_009767.1|WP_012119804.1|1647721_1648756_+|LacI-family-transcriptional-regulator
MKATIKQVAQRAGVSVATVSYVLNGAGVVTDETRRRVLDAIAELNYQPQYAARSMRGRSHTLGVTLPSHPGRLAEPALAEVLSGLADAAAVRGYFLLLATAGADQDETELCLSLARSRRVDGLVLLDMLVDDPRAQALAAAGIPHVCAGPPPAGVDSPSVVIDMRAAAVDAVRHLLSLGHRRIGLIQLPSDLAVSESIVEGYRQALTDAGLPFDPTLVVESGRTEEDGYQAMTELLATSRAPTAVLAGSDELAFGAMHALNDARLIVGRDVALVGLDDLPLAAHVNPPLTAVRQPRRAQGQQLAILLDDAIMKRNASLRMVTLSARLIIRRSSGSAWRAAEGVN
>NC_009767.1|WP_012119805.1|1648777_1649881_+|ABC-transporter-ATP-binding-protein
MASIKYDHVWKRFGDFAALKDLTLDIADQEFLVLVGPSGCGKTTALRCLAGLEEVTDGAIMIGDRVVNDVPPKDRDIAMVFQSYALYPHMSVYDNMAFGLKLRKTPKAEIDRRVKEAAEMLHIGHLLDRKPKALSGGQRQRVALGRAIVRHPSVFLMDEPLSNLDAKLRVQTRAEISKLHQRLKTTFIYVTHDQTEAMTMGTRIAVMRDGVLQQLDTPQNLYDHPANMFVAGFIGSPSMNFFEATLVRGDGQVLVDFGPFQLPVPPSRVDAIADHIGMPIFFGIRPEDIHDSHYVPRGVDESARLMTVVNVVEPLGSEVYAYVENGGREMVARLDPRTKARTGETFEVIIDMTKMHIFDRDTERALI
>NC_009767.1|WP_012119806.1|1649904_1650288_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MHPDLHTLAQLDFGYLTTTGRVTGKPHTIEIWFALHGRTVYMLAGNHASDWVKNARRTPNVSMTIGGFAFVGTARIVDQAEEDALARRLILAKYQPGYGEDLSDWGRTALAVAVDLNAVSETRPGML
>NC_009767.1|WP_012119807.1|1650438_1652061_-|hypothetical-protein
MKSRSLVYRMVVLFACLVGLATVFFAYRTSAAAVYIVRGPTTAVCSITGQTAPATFQDSIFGSELHGFLDQESVTISFQFPDGRIFSPNDTRLLDGVVDLPPHFALPPYRADVAGDLYFEFPVTNKWPYGCYRLTAVGQGSRQTAVGYLVVTPRTGPPPAPSPARLAVWNNGTFNAFAFHDDLINIHGTNFFPNEVISIWITQPDGTVLDYPQQVASDIGNFQSSFIFTNAHQTGKYTFTALGTLSGYQVFAPFELRARSSTPSGWAQLRVAFPAQASTRQNGGIAITGSLFAPGEYVGLWMTLPNNAVRSLPTQVADGNGDFFVVIDLDERLPTGRYSITAKGVASGRLQIAGFDVTPGSFQPASANNPAEPVPAVVESNVGDQTEVGALTTTSAARASVTFLDRTGAADTVRVEGSGYAPNEPVGIWMTFPDGAVLGMASLNVDSNGTFSVDVDLGVVLTAGRYRVSVQGVDSNRLVIVTFDAADRGAPGGVAPSTAPIQTLGGPTNLGGTAGNPGPEQTPRDQQRCAEPEAFWTPDC
>NC_009767.1|WP_012119808.1|1653089_1654382_+|DUF1080-domain-containing-protein
MHCLRRFALIGILALTLTGCSVSIGANPTATPEPRPTSTPRPTSTPRPTSTPLPTAAPTARPKPTIAPTTPSGPTGTGGGEIIPVTIDRLETFDHPGGLFSIDVPAGWNLEQDSNETNLLYLWMDAAENALIILAITETQEALTQDDLVERATAFVELFKDEKNFSMDPPEKLRSGGVQIIWSYTAQASGGVEAPLLANTFVYRDVDKVSLLTFGIPREQFNDLKPSLDAILQSYVIDPAVPLSGGESVQRFAFDFTRDEGKWVIDNSTSLQASIEGGVYRITLSDPDLYYLTAPDVTAANDMEVSADVLIQGNSRAGVAVRYGVGNPNNTRNYYTCWIDGGNQYGCFVSVNDRWTTLREPISSPAVKPGKVNRVSLRAEGDRIIFSVNGVEVQTFTDTSITRGQAALYLENFSTEAGAEFDNVMVTLVK
>NC_009767.1|WP_041330306.1|1654996_1655797_+|helix-turn-helix-domain-containing-protein
MSQLGERLRAARESQGISLSQAAAETRILQRYLVALEDGDYQNLPGDVYVRGFIRNYAAFLGLSADELIDLYRYERGRTDPIRIVPATSNPRVRGCIAPSLVGVFFVVLALVGVTYLVLSATNRIGENAQLATIPTATIPPAPSPLPTALPEATPVPIIIPATATVAVAGGVIEPSPTSTQEPEAPIVLEVRIDPGDNPGSWLEIKTDGESVFRRVLAPGRSVRFTARRSVSVRAGNAAVVTVVINDQERRLGTRPGEVVTFEWPP
>NC_009767.1|WP_012119810.1|1655811_1656309_+|YajQ-family-cyclic-di-GMP-binding-protein
MPAESTFDIVSDFERQELVNAIDQARREVATRYDLKDTKTEIVLSEKELTITTESEMHLAAVRDLVQTKALRRNLSIKIFKFGPVQEVSGGRVRQVATLQRGIPEDVAKKLAKLIRDHFPKVQPRIQGDALRVGSKSRDELQAVIRLVKERQDEFDIPLQFTNYR
>NC_009767.1|WP_049768800.1|1656312_1657758_+|30S-ribosomal-protein-S12-methylthiotransferase-RimO
MKVHIITLGCPKNQVDSEGMSGILAAQGHTLAASADDADVVIVNTCSFIAAAREETLAVLRDVAACKTPEQRLVAAGCMAESHRAIVAATPGVDATLGTREWTRIAEVVETFQPAATMAPLNAASAREIIPLTSAGVPSPAPHDLSVPGAYADWRTAPIRRRAVGPSAYLKISDGCNLRCAFCTIPSFKGDMRSKAIGAILGEAQELAAAGVKEIVLVAQHLTDYGRDLGLKDGLAILLDEICAVLPENVWVRLMYAYPHGIGERLIATMARHPQICHYLDMPLQHAHPETLRRMRRPPDTDRTRRLIDDLRAAIPDIAIRSTFIVGFPGETNTEFRALLAFLEDVQFDRVGVFRYSREPGTPAAALPDQLAPRIIERRWHEIMRLQQRISRERNRRWLGRVVRVLVEGQGQTDDGRMLSVGRSFRDAPEVDGQVLFWGAATPGTFVDVRVTQALDYDLWGDVVGVLDGEERIVKCIQSVG

Crispr_ID: NC_009767_32

• CRISPR_ID: NC_009767_32
• CRISPR_location: 1711794-1711893
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_32

Consensus_repeat	Method
GATTGAAGATGCCGCATTCTTGTCATT	CRISPRCasFinder

spacers of NC_009767_32

>32.1|1711821|46|NC_009767|CRISPRCasFinder
GTGGAGAAGGTGGTCAGATCGAAGAGGACGATTAAGTACCAATGAA

CRISPR arrays and Neighbor proteins around NC_009767_32

CRISPR arrays

The CRISPR arrays of NC_009767_32

>merge|NC_009767|32|1711794-1711893|CRISPRCasFinder
GATTGAAGATGCCGCATTCTTGTCATTGTGGAGAAGGTGGTCAGATCGAAGAGGACGATTAAGTACCAATGAAGATTGAAGATGCCTCATTCTTGTCATT

>NC_009767|32|28|1711794-1711893|CRISPRCasFinder
GATTGAAGATGCCGCATTCTTGTCATT	GTGGAGAAGGTGGTCAGATCGAAGAGGACGATTAAGTACCAATGAA
GATTGAAGATGCCTCATTCTTGTCATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119855.1|1708623_1709070_-|septum-formation-initiator-family-protein	unknown	unknown	gnl|CDD|368217
NC_009767.1|WP_012119850.1|1704066_1704594_-|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl|CDD|223427
NC_009767.1|WP_041330325.1|1708119_1708569_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_083760288.1|1710138_1710984_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl|CDD|234581
NC_009767.1|WP_012119867.1|1718878_1720888_+|hypothetical-protein	unknown	unknown	gnl|CDD|369609
NC_009767.1|WP_012119860.1|1713161_1713773_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_157042577.1|1717943_1718111_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119866.1|1718231_1718672_+|phage-holin-family-protein	unknown	unknown	gnl|CDD|377198
NC_009767.1|WP_012119861.1|1713803_1714415_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012119852.1|1706020_1706800_-|hypothetical-protein	unknown	unknown	gnl|CDD|227865
NC_009767.1|WP_157042793.1|1711192_1711618_+|carbonic-anhydrase	unknown	unknown	gnl|CDD|239474
NC_009767.1|WP_012119853.1|1707039_1708038_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133029
NC_009767.1|WP_157042794.1|1712193_1712334_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl|CDD|273688
NC_009767.1|WP_012119859.1|1712697_1713165_+|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl|CDD|224146
NC_009767.1|WP_012119851.1|1704595_1705861_-|hypothetical-protein	unknown	unknown	gnl|CDD|237864
NC_009767.1|WP_012119849.1|1703617_1703974_-|NADH-quinone-oxidoreductase-subunit-A	unknown	unknown	gnl|CDD|376344
NC_009767.1|WP_012119856.1|1709280_1709700_-|polymer-forming-cytoskeletal-protein	unknown	unknown	gnl|CDD|377376
NC_009767.1|WP_012119863.1|1715937_1717185_+|FAD-binding-oxidoreductase	unknown	unknown	gnl|CDD|223737
NC_009767.1|WP_012119864.1|1717105_1717822_-|ligase-associated-DNA-damage-response-endonuclease-PdeM	unknown	unknown	gnl|CDD|274996
NC_009767.1|WP_012119862.1|1714429_1715368_-|acetamidase/formamidase-family-protein	unknown	unknown	gnl|CDD|225279

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119855.1|1708623_1709070_-|septum-formation-initiator-family-protein	gnl|CDD|368217	pfam04977, DivIC, Septum formation initiator. DivIC from B. subtilis is necessary for both vegetative and sporulation septum formation. These proteins are mainly composed of an amino terminal coiled-coil.	2.3922e-09
NC_009767.1|WP_012119850.1|1704066_1704594_-|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl|CDD|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.10352e-55
NC_009767.1|WP_083760288.1|1710138_1710984_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl|CDD|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	1.54909e-153
NC_009767.1|WP_012119867.1|1718878_1720888_+|hypothetical-protein	gnl|CDD|369609	pfam07944, Glyco_hydro_127, Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.	7.62791e-46
NC_009767.1|WP_012119860.1|1713161_1713773_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.71864e-38
NC_009767.1|WP_012119866.1|1718231_1718672_+|phage-holin-family-protein	gnl|CDD|377198	pfam04020, Phage_holin_4_2, Mycobacterial 4 TMS phage holin, superfamily IV. These proteins are predicted transmembrane proteins with probably four transmembrane spans. The 1.E.40 is represented by the mycobacterial 4 phage holin, but it also contains many cyanobacterial. proteobacterial and firmicute proteins. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as in those of the bacteriophage of these organisms. The primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded the enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases.	8.19053e-25
NC_009767.1|WP_012119861.1|1713803_1714415_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.57851e-38
NC_009767.1|WP_012119852.1|1706020_1706800_-|hypothetical-protein	gnl|CDD|227865	COG5578, COG5578, Predicted integral membrane protein [Function unknown].	0.000269858
NC_009767.1|WP_012119851.1|1704595_1705861_-|hypothetical-protein	gnl|CDD|237864	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional.	1.59635e-06
NC_009767.1|WP_012119853.1|1707039_1708038_-|glycosyltransferase-family-2-protein	gnl|CDD|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.22188e-56
NC_009767.1|WP_157042794.1|1712193_1712334_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl|CDD|273688	TIGR01552, Hypothetical_protein_Rv3357/MT3465/Mb3392., prevent-host-death family protein. This model recognizes a region of about 55 amino acids toward the N-terminal end of bacterial proteins of about 85 amino acids in length. The best-characterized member is prevent-host-death (phd) of bacteriophage P1, the antidote partner of death-on-curing (doc) (TIGR01550) in an addiction module. Addiction modules prevent plasmid curing by killing the host cell as the longer-lived killing protein persists while the gene for the shorter-lived antidote is lost. Note, however, that relatively few members of this family appear to be plasmid or phage-encoded. Also, there is little overlap, except for phage P1 itself, of species with this family and with the doc family. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	0.00782393
NC_009767.1|WP_012119859.1|1712697_1713165_+|thioredoxin-dependent-thiol-peroxidase	gnl|CDD|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	1.04094e-79
NC_009767.1|WP_157042793.1|1711192_1711618_+|carbonic-anhydrase	gnl|CDD|239474	cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	1.80286e-65
NC_009767.1|WP_012119849.1|1703617_1703974_-|NADH-quinone-oxidoreductase-subunit-A	gnl|CDD|376344	pfam00507, Oxidored_q4, NADH-ubiquinone/plastoquinone oxidoreductase, chain 3.	9.23683e-40
NC_009767.1|WP_012119856.1|1709280_1709700_-|polymer-forming-cytoskeletal-protein	gnl|CDD|377376	pfam04519, Bactofilin, Polymer-forming cytoskeletal. This is a family of bactofilins, a functionally diverse class of cytoskeletal, polymer-forming, proteins that is widely conserved among bacteria. In the example species C. crescentus, two bactofilins assemble into a membrane-associated laminar structure that shows cell-cycle-dependent polar localization and acts as a platform for the recruitment of a cell wall biosynthetic enzyme involved in polar morphogenesis. Bactofilins display distinct subcellular distributions and dynamics in different bacterial species, suggesting that they are versatile structural elements that have adopted a range of different cellular functions.	1.10761e-30
NC_009767.1|WP_012119863.1|1715937_1717185_+|FAD-binding-oxidoreductase	gnl|CDD|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	6.99275e-54
NC_009767.1|WP_012119864.1|1717105_1717822_-|ligase-associated-DNA-damage-response-endonuclease-PdeM	gnl|CDD|274996	TIGR04123, hypothetical_protein, metallophosphoesterase, DNA ligase-associated. Members of this protein family are an uncharacterized putative metallophosphoesterase associated with a DNA ligase, a helicase, and a putative exonuclease. It may play a role in DNA repair. Its system is present in about 12 % of prokaryotic reference genomes.	4.24517e-87
NC_009767.1|WP_012119862.1|1714429_1715368_-|acetamidase/formamidase-family-protein	gnl|CDD|225279	COG2421, COG2421, Predicted acetamidase/formamidase [Energy production and conversion].	3.71121e-106

Protein sequences

>NC_009767.1|WP_157042793.1|1711192_1711618_+|carbonic-anhydrase
MPPARRVAVVACMDARLHPEKVLGIDIGDAHVIRNAGGRAHDAIRSLVISQQLLGTREIVVLHHTDCGMLTFTNEQLAAKIAADLNVHVEGQDFLPFADLEQSVRDDVALLRNSPLIPKDIPISGAIYDVRTGRVHEVVRA
>NC_009767.1|WP_083760288.1|1710138_1710984_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MRFDVLTLFPGMFTGPLSESILKRAIQAGRISVVLHDIRAYATDRHRTTDDAPYGGGAGMVMKPEPLAACIRAVLAMTDNDTGESAPKPPVILMTPDGEPFTQRIAAELATCPRLVLVCGRYEGVDERVRAALIDRELSIGDYVLTGGELAAMVVIDAVARLVPGVIDAESAAEESFSDGLLEYPQYTRPAVWEGREVPPVLVSGHHGEVAQWRRRERLRRTLERRPDLLARAVLTDADRAYLRTLGWRVPVAGGADDSTRIATDRDGADDSTRIATDRDG
>NC_009767.1|WP_012119856.1|1709280_1709700_-|polymer-forming-cytoskeletal-protein
MFGNRKQSQAISAPALNGKPETVIGANTSFVGTLKSDGNIRIDGRVEGDIEILGNLIIGETGQVIATIKAQNVHVSGAVKGEITALEQLEISPTGKVWGDITTSALHIEPGGLFRGQSSMTTNIDEPLLLEAPRPDRRD
>NC_009767.1|WP_012119855.1|1708623_1709070_-|septum-formation-initiator-family-protein
MPRPQRASTLRNHILRDRLRPERAGVHALTLVLVVLALWMMASFVGQIMTGAQLEQRRAALIAENARIEATNRALLDQVEYAESPAYAEQIAREQLGLAAEGDTVVLPTFADRPDGKATPTPIALPAPTPQLNWRAWIQALTASDDAP
>NC_009767.1|WP_041330325.1|1708119_1708569_+|hypothetical-protein
MNFVYDNRRSAAIGIGLIVLGVIWWLNLWWLLLPGALIAGGVAAYIQRRATRTSEAVQAVLWGVGLGVLLLIDFLFPGVLFLAGISILARGRETEIDAQMQRFIGGLRRPRTGAPSPETTRVPITVHPGAAPHPPMDRPATGETTRLRE
>NC_009767.1|WP_012119853.1|1707039_1708038_-|glycosyltransferase-family-2-protein
MLSVIIVTWNGRRFLDPCLRAVSAQLQPSDEIIVVDNGSVDGTAAWLAHAWRRVRLIALPSNLGFAGGVNVGLRAARGELLLLLNNDAFVESGCVPALVETMYQYPQIGAAAGVLTFDHRPELIASAGITARRDGLALDRWSGCNVHSLPATRQAVMGASGGLALYRRTMLEDIGLMAPDFFNYLEDVDLAWRAQLRGWACFLAPNARARHIYSATGGQGSPLKQRLLGRNRLRAIIRCFPTGVLRACLPHILAYEVLALTYAALTRKPAMIAGRVEALRDRRTLLHERRCIQARRIVSDYAFAAWLEPPPPPWQTLRTARYLNAILEAREH
>NC_009767.1|WP_012119852.1|1706020_1706800_-|hypothetical-protein
MNPFRVFWQSARDTFEDLLPLTLISTVWLLVVLPLPLLAGGFAVGGAPLGAAAFLLLTTLPMGIVSTGLTVLAQRIHEGRTISWSDFVAGARQYYRFGWQLYGAWLAGLLILVVNLVFYAQMEAPASAYLMLLFAYLLVAWISLLIYLGPLALLQERPSVRLAFRNAFVLAFGRPLFTIVTQGLMSIIVFLSLWPPLLLLLLITPALLAVWGFRATVTLIADAEARRAAQQEHQRAVATTPSNPPATEKGRGGQIRPRE
>NC_009767.1|WP_012119851.1|1704595_1705861_-|hypothetical-protein
MDSPGTPLTGWRPFIAAVIVAIATVALCYLAAPAHLAAAPAAQIGTLSMEISKRLQGSDVIQVGQELTFTIRITNTGTISITTLPLIDEYESSILQLERTDPLSSTNIVTPAIGGGLITWSDLTTDTVFGPLNPGQSIEIITVFRAIAPRVATVNRARIGAAVGFGGQEYAGEGRSSSGDAIGGQVVVRKEIVTDTVAASGLPLTFTITISNDGAADLTRIPLRDTFDPTYLAFAGAVPPPTVTSTSSITESVLEWDDVLPGLGLTRLRPGEVITVTTIFTALRSVDGAFINRAEAVGVRDEFDDEVQAPRQAEVPIRIIPGPAEATPTPTSTATPTPAPVEEPQPRPTDVPATPTETPTPTIEAVIATETPEAAGAVVTPTVPAPATLPRTGGSGGIPWILAVAALIIGTALALRLRLRF
>NC_009767.1|WP_012119850.1|1704066_1704594_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MERKRIIRYSVSPSAFGYLLIAATERGICTVALGDNPAALINDLARRFGDTILDQAGGLPGGWMNILLGYLNGERKNLDLPLDVAATPFQQEVWNALRAIPYGTTQTYQQVAQRIGRPDATRAVAQACANNPVALIVPCHRVVRTDGTSGGYRWGIERKRALIAHEAAHIELCAS
>NC_009767.1|WP_012119849.1|1703617_1703974_-|NADH-quinone-oxidoreductase-subunit-A
MLIDYLPILTLFLVAMFIAVFVIVLSRYLGPQRPNRRKLMPYESGMEPIGPAQRRFPIKFNLVAMLFILFDIEIIFLFPYALVYRQLGVPGLAVMGVFFVVLVIGLVYEWRRGALRWE
>NC_009767.1|WP_157042794.1|1712193_1712334_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MVIGITEDATTRRILNSDDARTRWRDILDAANRGEDVIITRYGKPN
>NC_009767.1|WP_012119859.1|1712697_1713165_+|thioredoxin-dependent-thiol-peroxidase
MADQRLNVGDPAPDFTAMTDSGDTIRLSDFRGKRVILYFYPKDDTSGCTTQACGFRDAYPQIEEKNAVVLGVSPDGVKSHQKFKTRHNLPFTLLVDEDHTIAEAYGVWAEKSMYGKKYWGIERSHFVIDENGMIVEAAVKVKPEESVKRAVAALG
>NC_009767.1|WP_012119860.1|1713161_1713773_-|Uma2-family-endonuclease
MTALVIKTDSPVVAGPLQGRWTLADWEALPDDGNRYEIIDGVLYMTTAPHSFHQWIIRRLERFIGIPAEDAGLAYCFPAPIGVIMPGCDPVQPDYVVVLQSRADLFRNGRIYGVPDLIVEVLSPGTRAYDERVKLAAYAAAGVPEYAIVDPEARQVRRYLLEAPGRYAPPQVAEATAQVAFACLPDIAFRVADLFTGAPDTTI
>NC_009767.1|WP_012119861.1|1713803_1714415_-|Uma2-family-endonuclease
MTALVIKTDSPVVAGPLQGHWTLADWEALPDDGNRYEIIDGVLYMTTAPHSFHQWIILSLIQFVGLPVRERGLGYMFMAPIGVIMPGFDPVQPDLIFIRAERADLFRNGRIYGVPDLIVEVLSPGTRAYDERVKLAAYAAAGVPEYAIVDPEARQVRRYLLEAPGRYAPPQVAEATAQVAFACLPDIAFRVADLFAGAPDTTV
>NC_009767.1|WP_012119862.1|1714429_1715368_-|acetamidase/formamidase-family-protein
MAEHTLRPDQVHHKWDNSLPPAIEIEPGDIVHCETAEVTNNQVTPGCDASVLTNLDFDQLYPLAGPIFVKGAEPGDILEVEILRMQTLDWGWTGIIPGLGLLANDFTAPYIRHFDLSNGVTAPLRDDIHIPIQPFCGTMGVALDEPGAFDVLPCGKAGGNIDTRHLNVGAKLYLPVFVPGALFSSGDCHAAQGDGEVCVTGIECPMQFSLRFNVLKGRSLRPWSYQFFTPPGPIQPAYDEKGYFVTTAIGPDLMTNAQNAVRDMIAWLEREKGLSREDAYILCSLAGDLRISQIVDAPNWCVSFYMALSVFR
>NC_009767.1|WP_012119863.1|1715937_1717185_+|FAD-binding-oxidoreductase
MNSTHDPQSYWQATAPATILPVDLPPTANVVVVGGGFFGAATTLFLARAGAAPILVEQAAPACGATGRNGGFHVVGTAEGYADAVARLGRETARAIMQITLDSRALLRQALVEEQIACDYREPGHLTLALGEAQYADLQRHVAALRADGFAAELFDRQQTQALIRTPLSEEITGALYGPENALLHSARLVYGLIAAAQRHGARLAMARVERLVPHNGHVRVITNCGVVEAGAVVVTVNAWTRDLIPTLRDVITPVRGQALAYAPIPRVFEQGIGASVTPTGEYWHQTPDGSIVIGGCRALAPGRDVGVTETVPTPEVIAAIEEVLPRLFPHLSGLEVTRRWAGLMAFTTDYVPVADAAPAMPGVWVAGGFCGHGMPFGMRFGQLLAEAALSGVLPAALTPFRVTRPTLQPRHHQQ
>NC_009767.1|WP_012119864.1|1717105_1717822_-|ligase-associated-DNA-damage-response-endonuclease-PdeM
MPDDQTVSPPSLIIAGEEVQLLTERALFWQRTATLIIADPHIGKASAFRAAAVAVPEDTTHADLDRLSRLIARCNAQKVVILGDLLHARSGRTTATLAAVSAWRARHASLDLILVRGNHDVRAGDPPSAWDIACLDEPWQMPPFILRHHPAAHPDGYALAGHLHPAARLIGAGRQRATLPCFWFGAQVGVLPAFGSFTGATLIAPERDDQVFVIAGDDVVAVSGALRGTESAQRAGRR
>NC_009767.1|WP_157042577.1|1717943_1718111_+|hypothetical-protein
MHAGDVQCRRVLHAIAVAETSLADDQLEKVPRPARAPAMAAGLSKFGSSMRQVDY
>NC_009767.1|WP_012119866.1|1718231_1718672_+|phage-holin-family-protein
MIDSPPQPPTRWQMARSLVLRWLVTSLAIFAAIQIVPGIEFVGPGWEIGLVALLFGLVNTALRPILTLLTCPLVLLTLGLFTLVINALLLLLTAYIAGGLGVQFRVDSFWSAFLGGLVIAIVNTLLLWMAGEAPVRIIVQNDRSDR
>NC_009767.1|WP_012119867.1|1718878_1720888_+|hypothetical-protein
MKSSPLTPLVCIPLPTGAVRPRGWLYRQLRLQADGLSGHLDQCWPDVADSAWIGGAAEGWERGPYWLDGMVPLAFVLNDASLIARVSRWIDIILEQQHDDGWLGPRRDASDARRRSLDPWPVFVLLKALSQFQEATGDRRVIPAMLRFLRRLDALLDEQPLFDWGRYRWADLVVSLHWLYDRTRESWLLDLAEKAQRQGFDWRAHFEQFPYPSRQRREDIYPPAPLPGCTFRLDMASHVVNNAMAIKTSGVWYRQSGDPRDRDAVWQAIETLDAFHGQVNGVFSGDEHLAGLNPSQGTELCAVVEYQYSLETLISMLGDPRLADRLERITFNALPAAFAPDMWSHQYVQQVNQIRCAILEDNIYTNNRADANTFGLEPNYGCCTANMHQGWPKFVTHLWMRTSGDGLAAVSYAPCELTMTAGGRRVRLTVETDYPFDESVRIVVESRAAARFPLLLRFPGWAVGATLSIDGRRETVHPGTFHRVERVWDGAVTIDLHLPMRVAVTRRPSGSAAIEYGPLVFALPIGETWQRIVPDAQGRYAAGERLRPGCPPDIADRLGDWEVLPTTPWNYGLELDAAQPERSVRIVHHPVGERPFSPEGAPVAAYAHGRRIPTWGEEHGAAGPPPAPVHVDTSLEVVRLIPYGCTNLRIAEFPLLESGSTTLQDSGTP

Crispr_ID: NC_009767_33

• CRISPR_ID: NC_009767_33
• CRISPR_location: 1824757-1824854
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_33

Consensus_repeat	Method
CGGTGACCATCCGGCATGGTCACC	CRISPRCasFinder

spacers of NC_009767_33

>33.1|1824781|50|NC_009767|CRISPRCasFinder
TGACGACGAGGCGCGTTTCGTCGTTCGGTTTGACGCATTTTACCAATGAC

CRISPR arrays and Neighbor proteins around NC_009767_33

CRISPR arrays

The CRISPR arrays of NC_009767_33

>merge|NC_009767|33|1824757-1824854|CRISPRCasFinder
CGGTGACCATCCGGCATGGTCACCTGACGACGAGGCGCGTTTCGTCGTTCGGTTTGACGCATTTTACCAATGACCTGTGACCATCCGGCATGGTCACC

>NC_009767|33|29|1824757-1824854|CRISPRCasFinder
CGGTGACCATCCGGCATGGTCACC	TGACGACGAGGCGCGTTTCGTCGTTCGGTTTGACGCATTTTACCAATGAC
CTGTGACCATCCGGCATGGTCACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119962.1|1832719_1834552_+|hypothetical-protein	unknown	unknown	gnl|CDD|224839
NC_009767.1|WP_157042796.1|1829212_1829848_+|translation-initiation-factor-IF-3	unknown	unknown	gnl|CDD|234582
NC_009767.1|WP_012119942.1|1812774_1814649_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119954.1|1826298_1826952_-|thiaminase-II	unknown	unknown	gnl|CDD|381700
NC_009767.1|WP_012119955.1|1827260_1828049_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_041330366.1|1829852_1830065_+|50S-ribosomal-protein-L35	unknown	unknown	gnl|CDD|234676
NC_009767.1|WP_083760289.1|1820718_1821429_+|hypothetical-protein	unknown	unknown	gnl|CDD|335169
NC_009767.1|WP_012119959.1|1830101_1830455_+|50S-ribosomal-protein-L20	unknown	unknown	gnl|CDD|179959
NC_009767.1|WP_011958657.1|1818911_1819085_+|50S-ribosomal-protein-L34	unknown	unknown	gnl|CDD|366117
NC_009767.1|WP_012119951.1|1822681_1823371_+|KH-domain-containing-protein	unknown	unknown	gnl|CDD|224760
NC_009767.1|WP_012119948.1|1819545_1820715_+|DNA-adenine-methylase	unknown	unknown	gnl|CDD|225927
NC_009767.1|WP_012119946.1|1817225_1818737_+|30S-ribosomal-protein-S1	unknown	unknown	gnl|CDD|223613
NC_009767.1|WP_012119961.1|1831676_1832720_+|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl|CDD|234780
NC_009767.1|WP_012119953.1|1825456_1826299_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119956.1|1828274_1829063_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_041330368.1|1830451_1831240_+|RNA-methyltransferase	unknown	unknown	gnl|CDD|349968
NC_009767.1|WP_012119950.1|1821564_1822602_+|membrane-protein-insertase-YidC	unknown	unknown	gnl|CDD|274665
NC_009767.1|WP_012119952.1|1823445_1824264_+|ribokinase	unknown	unknown	gnl|CDD|238912
NC_009767.1|WP_012119941.1|1811832_1812762_-|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|224331
NC_009767.1|WP_012119947.1|1819148_1819517_+|ribonuclease-P-protein-component	unknown	unknown	gnl|CDD|376392

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119962.1|1832719_1834552_+|hypothetical-protein	gnl|CDD|224839	COG1928, PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones].	1.94857e-05
NC_009767.1|WP_157042796.1|1829212_1829848_+|translation-initiation-factor-IF-3	gnl|CDD|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	1.06141e-94
NC_009767.1|WP_012119954.1|1826298_1826952_-|thiaminase-II	gnl|CDD|381700	cd19365, TenA_C-like, uncharacterized TenA_C proteins. This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. This family includes mostly uncharacterized TenA_C- like proteins.	6.4509e-109
NC_009767.1|WP_012119955.1|1827260_1828049_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	3.95738e-99
NC_009767.1|WP_041330366.1|1829852_1830065_+|50S-ribosomal-protein-L35	gnl|CDD|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	5.89642e-11
NC_009767.1|WP_083760289.1|1820718_1821429_+|hypothetical-protein	gnl|CDD|335169	pfam02963, EcoRI, Restriction endonuclease EcoRI.	1.88044e-12
NC_009767.1|WP_012119959.1|1830101_1830455_+|50S-ribosomal-protein-L20	gnl|CDD|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	9.85811e-63
NC_009767.1|WP_011958657.1|1818911_1819085_+|50S-ribosomal-protein-L34	gnl|CDD|366117	pfam00468, Ribosomal_L34, Ribosomal protein L34.	2.91914e-08
NC_009767.1|WP_012119951.1|1822681_1823371_+|KH-domain-containing-protein	gnl|CDD|224760	COG1847, Jag, Predicted RNA-binding protein [General function prediction only].	1.76237e-44
NC_009767.1|WP_012119948.1|1819545_1820715_+|DNA-adenine-methylase	gnl|CDD|225927	COG3392, COG3392, Adenine-specific DNA methylase [DNA replication, recombination, and repair].	1.35572e-83
NC_009767.1|WP_012119946.1|1817225_1818737_+|30S-ribosomal-protein-S1	gnl|CDD|223613	COG0539, RpsA, Ribosomal protein S1 [Translation, ribosomal structure and biogenesis].	8.37237e-67
NC_009767.1|WP_012119961.1|1831676_1832720_+|phenylalanine--tRNA-ligase-subunit-alpha	gnl|CDD|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NC_009767.1|WP_012119956.1|1828274_1829063_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	1.00647e-98
NC_009767.1|WP_041330368.1|1830451_1831240_+|RNA-methyltransferase	gnl|CDD|349968	cd18095, SpoU-like_rRNA-MTase, SAM-dependent rRNA methylase related to SpoU-TrmH. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	5.22455e-61
NC_009767.1|WP_012119950.1|1821564_1822602_+|membrane-protein-insertase-YidC	gnl|CDD|274665	TIGR03592, yidC_oxa1_cterm, membrane protein insertase, YidC/Oxa1 family, C-terminal domain. This model describes full-length from some species, and the C-terminal region only from other species, of the YidC/Oxa1 family of proteins. This domain appears to be univeral among bacteria (although absent from Archaea). The well-characterized YidC protein from Escherichia coli and its close homologs contain a large N-terminal periplasmic domain in addition to the region modeled here. [Protein fate, Protein and peptide secretion and trafficking].	6.87169e-79
NC_009767.1|WP_012119952.1|1823445_1824264_+|ribokinase	gnl|CDD|238912	cd01937, ribokinase_group_D, Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.	1.53131e-39
NC_009767.1|WP_012119941.1|1811832_1812762_-|HEAT-repeat-domain-containing-protein	gnl|CDD|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	1.54365e-08
NC_009767.1|WP_012119947.1|1819148_1819517_+|ribonuclease-P-protein-component	gnl|CDD|376392	pfam00825, Ribonuclease_P, Ribonuclease P.	9.48005e-25

Protein sequences

>NC_009767.1|WP_012119952.1|1823445_1824264_+|ribokinase
MTIPDYLLIGHMTRDVLFDGSYAPGGTALYAALTARRLGRRVGVVSARAAIPPDWSADIAVAFAATMDAPIFENRYTPQGRVQLLHADSGVLTLDNVPAAWRSARIVHLAPILAETPEHLVNAFPDALLGMTPQGMMRAWNAPFPAPITYQPWDPPPHVLARIDALVLSIEDVRFDEALAHAYARYCPIVALTRGAAGATLFIYGEPHYIDACPAIERDPTGAGDVFAAALLVRLDETGDPLEAARFAACIAARSVEGVGPGAIPYREDVER
>NC_009767.1|WP_012119951.1|1822681_1823371_+|KH-domain-containing-protein
MKSIEISARTVAEAVRLALAQLGKDRDEVAIEVLEPGTNGDEALVRVTVVDDETEEPSAPSRATATGPVEQVARQILEDILERMDIHAYVTAVVSAVPDQRGEPEETITLHIEGADEEAMSLLIGRRGETLRSLQFMVNLLVSRRVQKWPQIVVDVGNYRQRRQESLEGLARRMAERVRQSGRPLMLEPMGAYERRIVHLALRSDPTVYTESSGEGENRKVVIYPAKRS
>NC_009767.1|WP_012119950.1|1821564_1822602_+|membrane-protein-insertase-YidC
MPVWLAFVEFLQQVLLTFYAWTGSAGLAIILFTIVARLLILPLTIKSLQSSRKMQELQPHMKELQRKYGKDPQKLQEETMRLYREYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSPAEHAGSAMLRVLNEQGIAFSTATTATLGQPQLAGSFLWLPDLGKTDPYYILPILSVIFQLIVQLMATPRIQDPQQKAMMQSMLILPIVFGYIGFIFPSGAVLYWVVGSILSIIQQYVISGWGSLANYLKFLPTDGGLLPPITPPAQSAASAVGGGSPAASEESSRKVDFWDVLRPLTEARSEPAEPQSLSSGSAAPVESAAPTEAARAEARRVSSQMNPRRRRARR
>NC_009767.1|WP_083760289.1|1820718_1821429_+|hypothetical-protein
MWLEKNQLHKQRTGTIINVTSKKQQLDIIKALQQVIDYIDQKFSKKISLIHKPEWRLRDIVAELRQTYPDVKFHYHFESSSIRPDGGILCIHGQRDDTLTYPILIAEVKNQGTNDLRVAEGRPRQARGNAIERLGKNLIGLRTALMRESIFPFVCFGYGCDFEDKSSILDRVATMAMFGELNKTYLHDEGDGKFKRGSFYFRQEPWSVEEMADIMKDIAERSVFYYFSKYGEKHFQ
>NC_009767.1|WP_012119948.1|1819545_1820715_+|DNA-adenine-methylase
MGDNQSLIIGDNWQLSLWEKDDPVVENPEYLSRQLITYIGNKRALLGCIGIALERVKRRLGKNRLRVADLFSGSGVVSRYMKAHASLLISNDIEDYAAVTSRCYLRNRSTVDFVLLSEIVADLNARVVAESLPKGFIEEMYAPKDEKNITKEDRVFYTRENARRIDNYRRLIEECPNEMKDLLLGPLLSEASVHANTAGVFKGFYKNRHTGVEHFGGSGSDALTRILGRIMLESPVLSLFECDYEVFQEDANILARRLEGLDLVYIDPPYNQHPYGSNYFMLNLIVHYQRPANISRISGIPQDWRRSGYNVKNKALPLLKDLLEHIDASFILISFNNEGFIQPETMRILLEKIGKVDVIELPYNAFRGSRNFNNRSIYVTEYMFLVERR
>NC_009767.1|WP_012119947.1|1819148_1819517_+|ribonuclease-P-protein-component
MKRAYRLRTPEQYQRVRRDGRTWDAGMLMLNAAPNRRRISRCGFIVAKRLGGAVVRNRIRRRVREAVRLLYPQIAPGWDMVFIARSPALAEIAFPQLQALVQRLLQRAGVVQGAVSETPDKD
>NC_009767.1|WP_011958657.1|1818911_1819085_+|50S-ribosomal-protein-L34
MPKRTWQPKRIPRRRKHGFLARMATKDGRAVLRRRRLQGRYRLTVSDERRQIRRGHR
>NC_009767.1|WP_012119946.1|1817225_1818737_+|30S-ribosomal-protein-S1
MTDQERPVEERNELLGDSAPTAAGVAVADAETQQQSIESPPVGETPDGAGAAADVSDVAVSSDGGDSRESVRAADESPAAVAESASEAPVPAAETPPTGSAEVAPEAAAPAGTAEAASYQAPAEAPTGRPRRVKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKVRVKSVEPDGRRISLTMRMKERGAEPRSGRGKKKPEVDYDKLAALRVGDNVEGTVTGLAPFGVFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTFKVLEVDAEGARISLSLRRAQRGQKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNARVARVEDAVKVGDKVQVRVLDVDPQSKRISLSLRLEDTPREPPPREERPREERPREERPRMERAVRSEGRPPREERPPRRERVSDAYSPEEDDFGGNATLDDLMSKFGGPRRSERRRRQDDDDDVEDRSLRRQRDAIRRTLQQLDDD
>NC_009767.1|WP_012119942.1|1812774_1814649_-|hypothetical-protein
MTAGTIERPTFTGTEAQQALAEEIYQLMAAQGRLFAFDAPIRQTLQNLADFYARQRQMDPAEAARLIDEALRANDHIFMRQETNGDVVFITSRRGRYIPPQVDTVHTFKQRLYEPENPLPVDDISVVVTTTRPALTTVEPVFISEYWQQQAGLIPVVVESTVETPVEPVAAAPEVVEPVSHSVLLEEERQEERQIASPAEPTPLNTVIVLPNGLQIDLRRPVDELMAQHGHALMSHLRAAIENDPLRRLVLFGNQAFPEAALVSFGKNDLRRISDYIKEVGEPLLDTQIIADIFYHNPRQSDYEVFRFALNYRLSREKDFEFVGIEGARLWSVRNLPAIGTKRVKASEMGQIAGYIEEGFDDSLAEQSAESIRTSGQVSHILTFFEWEYGILPLTRALAALLPQPLLADQRSAVLRFELPQHYVSTLVELRYPTGNRGGWLQGLDTLFHDYLVPGALITLMRTDDPRTFAITYEEQEETQDRLLVLDETKKTPKFTFANMSYACVVDTDMLVNQQQYGRLRNLKAFPMNERRKADLMLEHVFEIIGAPVGTRAEPKYAAAFETLFVALNVLRPASREYLTHLLTEGDDFTPDESRPGWWFYTPPPSLEQEEDEDQDDEDFDDEE
>NC_009767.1|WP_012119941.1|1811832_1812762_-|HEAT-repeat-domain-containing-protein
MDLAAHLRTLAAREHLSMRELRSLSGLDPHDHATVWTEWQRIPVGRRIEIAHAMVELAEDNIDLDFTVMFQWLLDDADATVRASAIEGLWECDGLPVLRRMLALLHDPAGQVRAAAAMALGRFAYMAEIEEIDAVYGQQVHDALLALIRDPAQPTEVRRRAIESAGYFAASDAVQQQIELAYASSDQLMRESALTAMGRSMLPRWLPIVSRELESPSPALRYEAARAAGEMADLARSLVARVVRLCNDADTEVALAAIWALGQIGGETARRTLQRISGSDDEARSQAAAEALDELTLEEGFSGGDWRNN
>NC_009767.1|WP_012119953.1|1825456_1826299_-|hypothetical-protein
MTHQLLALDFSGMLSLEAVRFGMPDRLERTLRHSGLWDLGVDVERYWNDIVKPTWETGSTTPTPYALLIARRLSCDDALQRAERFVQAYLQASVIDPAWRPLFDAMQSAEHMTPLVATDHYAEATDHIARQIAAMGWHAAALRTDDTGKTSPQIISTPNGDRPPSRAVLIANSADLGVRKDSALFWRRVQEGLGEQPTEILIVDDFGANENLLDFYADPVKVNRRQAQTIDAMRSVFGAPVQTFPFILDRTLPDREALYAAYRAKVEATVREMVTVLHGR
>NC_009767.1|WP_012119954.1|1826298_1826952_-|thiaminase-II
MRFTETLWSSITGIYQAIIQHPFNEELAQGTLSHEKFAFYMQQDALYLADFARALATMAGRAPDEEAIIQFARFAEGVAVVERALHFTYFREFGIDAPTRQQSPSCFAYTNFLLATTAGRSYEEGMAALLPCFWIYREVGSDIYRRAAPNNPYQKWIDTYAGQEFAEWVNRAIDLTDAIADQASEPQKARMRDAFVHSSRLEWMFWDSAYRLEQWMP
>NC_009767.1|WP_012119955.1|1827260_1828049_-|DUF4058-family-protein
MEPPFPGMDPYLEHSSLWPDVHHRIISAACDYLQARIAPGYIAQITPYVALEQIEIAAPRRALVPDIGVYEREPAAIAAASVDAPTLTGVALAEIPTRYARIEIRSVVDETLVTAIELLSPVNKRPGPDGADAYEKKRQELFMSGVHLLEIDLLRGGKRPNLARPDPLPNAPYFIFLSRAERWPAIDIWTCPLQQPLPTVPVPLRRPDPDAPLPLTRLVHQVYRNARYDLRIDYRQPPPPPDLSPEDAAWLDAHLHAKGLRP
>NC_009767.1|WP_012119956.1|1828274_1829063_-|DUF4058-family-protein
MEPPFPGMDPYLEHSSLWPDVHTGLITAMRDDLQARIAPGYIAQITPYVALEQIEIAAPRRALVPDIGVYEREPAAIAAASVDAPTLTGVALAEIPTRYARIEIRSVVDETLVTAIELLSPVNKRPGPDGADAYEKKRQELFMSGVHLLEIDLLRGGKRPNLARPDPLPNAPYFIFLSRAERWPAIDIWTCPLQQPLPTVPVPLRRPDPDAPLPLTRLVHQVYRNARYDLRIDYRQPPPPPDLSPEDAAWLDAHLRAKGLRP
>NC_009767.1|WP_157042796.1|1829212_1829848_+|translation-initiation-factor-IF-3
MRDRLRINNRIRAREVRLIDENGAQVGIVPIRDALLMAEERGLDLVEVAPNAVPPVCRILDYGKFRYEQSKKEREARKNQKQVDVKQIRLEPKTDEHDLDVKAKQARRFLLDGDKVKFNLRFRGREIFHQEIGLEMLERMAEELRDVSVVEQRPTMEGRVLTLLLAPNQKARTQAQRERQQQAPRTPTQAKSQVSVPASDAAPDDQSDEEE
>NC_009767.1|WP_041330366.1|1829852_1830065_+|50S-ribosomal-protein-L35
MPKMKTHKGAAKRFTLTGTGKMVRAAGRRGHFRRRMSLRILQHLDRTFEVHKTVQRRLRRALPYIAKHSR
>NC_009767.1|WP_012119959.1|1830101_1830455_+|50S-ribosomal-protein-L20
MARVKRGVMVRKRHKKLLEQAKGYRGSRSRRVKVARETVMKALWYAYRDRRNRKRDFRRLWIIRINAAARMHGMSYSRLMNGLKRAGIELDRKVLADMAVRDPAAFGRVVEQAQQVV
>NC_009767.1|WP_041330368.1|1830451_1831240_+|RNA-methyltransferase
MITSPANQHVKRIRSLAADRQKRRRERMFVLEGVRLVADALESGATLTLVLYAPEQLQQTPAGLDLLQRLQRLPVGYAATPQVIASVADTVHPQGVVALARWPQIPPGKPGLILVIDAVQDPGNLGTLLRSAEAVGVAQTLCSVGTVDVYAPKVVRSAMGAHIRLSIEQDVRWDEIGERLADVDHVYAADPHARMPYYAADWRQPSALLVGNEAHGLSEAARRLATKPITIPMCGRAESLNVAVAASVILFEALRQRTLGRG
>NC_009767.1|WP_012119961.1|1831676_1832720_+|phenylalanine--tRNA-ligase-subunit-alpha
MSLIDQLNQLEQEALAALDHAADLTALAEWKSAYLGKQGALSRLSRGLGALPAEERPAAGARFNAARATLEQALERAEAQLKRAARQHAFEADQVDVTLPGRAPAVGRLHPTTQMLRTIYTILGEMGFQVWESPEVETDEFNFQLLNMPPDHPARDMWDTFYVETASGEPTLLLRTHTSPGQIYAMRANAPNPVRAILPGKCYRYEQVTARHEMQFFQVEGIAIGERISFADLKGTLVAFAERLYGKGVKTRFRPSYFPFTEPSVEFDIECFLCGGAGCRVCKHSGWLEILGAGMIHPTVLRNGGYDPEKVSGFAFGMGPERMAMLRYGIDDIRWFFSGDERFLQQF
>NC_009767.1|WP_012119962.1|1832719_1834552_+|hypothetical-protein
MKARLPLIALVALFLALCVLYNLTTPLGEGPDEPGHAAYVFFVARERRLPVQCLPPCVSDVPGSGHHPPLAYLLATPAALWLPHPLRAFDLPGNPRFTWAGGDQVNAVAHGSREQWPWDAQVWAWRLARGVSSLAGAATVVFTYLAVRALHRSTEHAANGDLMALLAAALVALNPQFIFISSLISNDALLAALGAALLWLVVSSPRSLLRAMLIGVVLGLALITKQSAWVFAPFVFVWCVTGGVAHMSAKTLHPLHAADGSAATPRSSMAVVVAGAMIIAGWWYLRNWQLYGDPLGLQAFRAEFATQAFDATNLAVWAGALTALYESFWARFGWMNLPAPPWTMAVYVALLAVSVAGWVRLLARPNKAICRWTWQLAALPILSLVWVVSFAFTAGLVAWQGRLLFPAIAAIATLLACGLSVWLRHGASVMLLIVGMAGIAAWLPVSVIRPAYPFQTLSSSAVRAWEGHETYARFARSTEPGAVIRRWRIEGTPRPGATIELALLWNAVSRQDRDWWTFVHLVDANRRIVTEDNREPRNGAYPMSQWVAGDWVEARYSLAIPAHLSPGEYALWVGLWDPATGRRAAFFDDDNVYDPDGDHVVLTTLMITSP

Crispr_ID: NC_009767_34

• CRISPR_ID: NC_009767_34
• CRISPR_location: 1838267-1838463
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_009767_34

Consensus_repeat	Method
NNNGNGCGGGCGCAGCGCGAAGCGGAGCGNGC	CRT

spacers of NC_009767_34

>34.1|1838296|28|NC_009767|CRT
ACAGCGCGAAGCGGAGCGGGCGCAACGT
>34.2|1838353|19|NC_009767|CRT
CGCGCGACAGGCAGCCGAG
>34.3|1838401|34|NC_009767|CRT
GCAACGTGAAGCGCGCGCGCGACAGGCAGCCGAG

CRISPR arrays and Neighbor proteins around NC_009767_34

CRISPR arrays

The CRISPR arrays of NC_009767_34

>merge|NC_009767|34|1838267-1838463|CRT
GCGCGGGCGCAGCGCGAAGCGGAGCGAGCACAGCGCGAAGCGGAGCGGGCGCAACGTGAAGCGCAGGCGCGCGAAGCCGAAGCGCGCGCGCGACAGGCAGCCGAGGAGCGGGCGCAGCGCGAAGCGGAGCGGGCGCAACGTGAAGCGCGCGCGCGACAGGCAGCCGAGGAGCGGGCGCAGCGCGAAGCGGAGCGGGC

>NC_009767|34|4|1838267-1838463|CRT
GCGCGGGCGCAGCGCGAAGCGGAGCGAGC	ACAGCGCGAAGCGGAGCGGGCGCAACGT
GAAGCGCAGGCGCGCGAAGCCGAAGCGCG	CGCGCGACAGGCAGCCGAG
GAGCGGGCGCAGCGCGAAGCGGAGCGGGC	GCAACGTGAAGCGCGCGCGCGACAGGCAGCCGAG
GAGCGGGCGCAGCGCGAAGCGGAGCGGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012119962.1|1832719_1834552_+|hypothetical-protein	unknown	unknown	gnl|CDD|224839
NC_009767.1|WP_157042796.1|1829212_1829848_+|translation-initiation-factor-IF-3	unknown	unknown	gnl|CDD|234582
NC_009767.1|WP_012119968.1|1844612_1846547_-|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|376556
NC_009767.1|WP_012119973.1|1852363_1852885_+|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl|CDD|100051
NC_009767.1|WP_041330377.1|1848920_1849877_-|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|224423
NC_009767.1|WP_157042584.1|1846806_1847334_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119972.1|1851784_1852102_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012119961.1|1831676_1832720_+|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl|CDD|234780
NC_009767.1|WP_012119959.1|1830101_1830455_+|50S-ribosomal-protein-L20	unknown	unknown	gnl|CDD|179959
NC_009767.1|WP_041330368.1|1830451_1831240_+|RNA-methyltransferase	unknown	unknown	gnl|CDD|349968
NC_009767.1|WP_012119967.1|1843951_1844203_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330375.1|1847317_1847896_-|peroxidase-related-enzyme	unknown	unknown	gnl|CDD|130981
NC_009767.1|WP_012119956.1|1828274_1829063_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_012119963.1|1834561_1837063_+|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl|CDD|234804
NC_009767.1|WP_012119955.1|1827260_1828049_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_012119966.1|1841174_1843607_-|CHAT-domain-containing-protein	unknown	unknown	gnl|CDD|378942
NC_009767.1|WP_012119971.1|1849875_1851570_+|gamma-glutamyltransferase	unknown	unknown	gnl|CDD|223482
NC_009767.1|WP_012119954.1|1826298_1826952_-|thiaminase-II	unknown	unknown	gnl|CDD|381700
NC_009767.1|WP_041330366.1|1829852_1830065_+|50S-ribosomal-protein-L35	unknown	unknown	gnl|CDD|234676
NC_009767.1|WP_012119965.1|1839112_1840699_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379233

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012119962.1|1832719_1834552_+|hypothetical-protein	gnl|CDD|224839	COG1928, PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones].	1.94857e-05
NC_009767.1|WP_157042796.1|1829212_1829848_+|translation-initiation-factor-IF-3	gnl|CDD|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	1.06141e-94
NC_009767.1|WP_012119968.1|1844612_1846547_-|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|376556	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase. This family includes zinc amidases that have N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls (preferentially: D-lactyl-L-Ala). The structure is known for the bacteriophage T7 structure and shows that two of the conserved histidines are zinc binding.	3.17977e-19
NC_009767.1|WP_041330377.1|1848920_1849877_-|alpha/beta-fold-hydrolase	gnl|CDD|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	1.97493e-12
NC_009767.1|WP_012119973.1|1852363_1852885_+|gamma-carbonic-anhydrase-family-protein	gnl|CDD|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	1.62421e-74
NC_009767.1|WP_012119961.1|1831676_1832720_+|phenylalanine--tRNA-ligase-subunit-alpha	gnl|CDD|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NC_009767.1|WP_012119959.1|1830101_1830455_+|50S-ribosomal-protein-L20	gnl|CDD|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	9.85811e-63
NC_009767.1|WP_041330368.1|1830451_1831240_+|RNA-methyltransferase	gnl|CDD|349968	cd18095, SpoU-like_rRNA-MTase, SAM-dependent rRNA methylase related to SpoU-TrmH. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	5.22455e-61
NC_009767.1|WP_041330375.1|1847317_1847896_-|peroxidase-related-enzyme	gnl|CDD|130981	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme. This protein family with length of about 200 amino acids. One member, from Myxococcus xanthus, is a selenoprotein, with an otherwise conserved Cys replaced by Sec. This family is drawn narrowly enough to suggest that These proteins contain a domain described by TIGR00778, with a CxxCxxxHxxxxxxxG motif. Some members of that family are known to act as peroxidases or correlate with resistance to oxidative stress.	2.80807e-66
NC_009767.1|WP_012119956.1|1828274_1829063_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	1.00647e-98
NC_009767.1|WP_012119963.1|1834561_1837063_+|phenylalanine--tRNA-ligase-subunit-beta	gnl|CDD|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0
NC_009767.1|WP_012119955.1|1827260_1828049_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	3.95738e-99
NC_009767.1|WP_012119966.1|1841174_1843607_-|CHAT-domain-containing-protein	gnl|CDD|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	4.94851e-07
NC_009767.1|WP_012119971.1|1849875_1851570_+|gamma-glutamyltransferase	gnl|CDD|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	5.61334e-154
NC_009767.1|WP_012119954.1|1826298_1826952_-|thiaminase-II	gnl|CDD|381700	cd19365, TenA_C-like, uncharacterized TenA_C proteins. This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. This family includes mostly uncharacterized TenA_C- like proteins.	6.4509e-109
NC_009767.1|WP_041330366.1|1829852_1830065_+|50S-ribosomal-protein-L35	gnl|CDD|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	5.89642e-11
NC_009767.1|WP_012119965.1|1839112_1840699_-|helix-turn-helix-domain-containing-protein	gnl|CDD|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	6.9696e-06

Protein sequences

>NC_009767.1|WP_012119963.1|1834561_1837063_+|phenylalanine--tRNA-ligase-subunit-beta
MRVPLSWLKEFVDITLSVEELAERLTRAGLECEGIERIGVEGADLPWDPEKIVIGGILEVRQHPNADRLVLADVDYGAGAPHTVVTGAPNLFPYKDKGRLSQPLKGVFAREGAELYDGHAEGWVKMRLKGRPVRGIMSDAMLCSEKELGLSEDHEGILILPDDAPVGMPLRDYLGDVVLKFDVLPNMARCLSILGVAREIAALTGASLRMPEMNVVEHGPPIEGRVRVTIEEPDLCPRFTATLIEGVTIGPSPLWMQRRLTMAGMRPINNIVDISNYVMLEFGGPNHMFDADRVADQHLIIRLARLGERLVTLDNKEHNLDASLGGGMLPLLVCDPRGPLSLAGVMGGASSEVSATTTRVLLEVAVWDPTIIRRMGTALRARSEASKRFERGVDYELPPLVQRRALSLLQRIAGGKVAQGMVDNYPRPWQPVILDLTPREVRRIVGVALSATEIADLLRPLGFACDLIDNGAVVRVTVPSSRRDVTMLADLCEEVARMYGYDRIPLTLMADALPEQRNNSSLELELRVRDLLAGAGLDEAITYSLTSMAAVAAVNPADADPSRYLRLANPLTPEREFLRRSLLPTLLEALAQNLRERERVLLFEIGRVYLKRAPGSDEPRPEEPRRLALALAGRRHERAWHTSDETFMDFFDLKGVVETLLARLNISGVQYVPVSDDPRFHPGRAARLERDGRVLGVIGELHPDVCERLEIAAPRAMAAELDLELIGALIEPVRYRAISRYPATTQDLSLVAAIDVPAERVTVTIRKYAGALLESLTLFDVYESEQVGVGKRSLTYRLVFRAPDRTLNDAEIAKIRQKIVRGLEHDLGATIRG
>NC_009767.1|WP_012119962.1|1832719_1834552_+|hypothetical-protein
MKARLPLIALVALFLALCVLYNLTTPLGEGPDEPGHAAYVFFVARERRLPVQCLPPCVSDVPGSGHHPPLAYLLATPAALWLPHPLRAFDLPGNPRFTWAGGDQVNAVAHGSREQWPWDAQVWAWRLARGVSSLAGAATVVFTYLAVRALHRSTEHAANGDLMALLAAALVALNPQFIFISSLISNDALLAALGAALLWLVVSSPRSLLRAMLIGVVLGLALITKQSAWVFAPFVFVWCVTGGVAHMSAKTLHPLHAADGSAATPRSSMAVVVAGAMIIAGWWYLRNWQLYGDPLGLQAFRAEFATQAFDATNLAVWAGALTALYESFWARFGWMNLPAPPWTMAVYVALLAVSVAGWVRLLARPNKAICRWTWQLAALPILSLVWVVSFAFTAGLVAWQGRLLFPAIAAIATLLACGLSVWLRHGASVMLLIVGMAGIAAWLPVSVIRPAYPFQTLSSSAVRAWEGHETYARFARSTEPGAVIRRWRIEGTPRPGATIELALLWNAVSRQDRDWWTFVHLVDANRRIVTEDNREPRNGAYPMSQWVAGDWVEARYSLAIPAHLSPGEYALWVGLWDPATGRRAAFFDDDNVYDPDGDHVVLTTLMITSP
>NC_009767.1|WP_012119961.1|1831676_1832720_+|phenylalanine--tRNA-ligase-subunit-alpha
MSLIDQLNQLEQEALAALDHAADLTALAEWKSAYLGKQGALSRLSRGLGALPAEERPAAGARFNAARATLEQALERAEAQLKRAARQHAFEADQVDVTLPGRAPAVGRLHPTTQMLRTIYTILGEMGFQVWESPEVETDEFNFQLLNMPPDHPARDMWDTFYVETASGEPTLLLRTHTSPGQIYAMRANAPNPVRAILPGKCYRYEQVTARHEMQFFQVEGIAIGERISFADLKGTLVAFAERLYGKGVKTRFRPSYFPFTEPSVEFDIECFLCGGAGCRVCKHSGWLEILGAGMIHPTVLRNGGYDPEKVSGFAFGMGPERMAMLRYGIDDIRWFFSGDERFLQQF
>NC_009767.1|WP_041330368.1|1830451_1831240_+|RNA-methyltransferase
MITSPANQHVKRIRSLAADRQKRRRERMFVLEGVRLVADALESGATLTLVLYAPEQLQQTPAGLDLLQRLQRLPVGYAATPQVIASVADTVHPQGVVALARWPQIPPGKPGLILVIDAVQDPGNLGTLLRSAEAVGVAQTLCSVGTVDVYAPKVVRSAMGAHIRLSIEQDVRWDEIGERLADVDHVYAADPHARMPYYAADWRQPSALLVGNEAHGLSEAARRLATKPITIPMCGRAESLNVAVAASVILFEALRQRTLGRG
>NC_009767.1|WP_012119959.1|1830101_1830455_+|50S-ribosomal-protein-L20
MARVKRGVMVRKRHKKLLEQAKGYRGSRSRRVKVARETVMKALWYAYRDRRNRKRDFRRLWIIRINAAARMHGMSYSRLMNGLKRAGIELDRKVLADMAVRDPAAFGRVVEQAQQVV
>NC_009767.1|WP_041330366.1|1829852_1830065_+|50S-ribosomal-protein-L35
MPKMKTHKGAAKRFTLTGTGKMVRAAGRRGHFRRRMSLRILQHLDRTFEVHKTVQRRLRRALPYIAKHSR
>NC_009767.1|WP_157042796.1|1829212_1829848_+|translation-initiation-factor-IF-3
MRDRLRINNRIRAREVRLIDENGAQVGIVPIRDALLMAEERGLDLVEVAPNAVPPVCRILDYGKFRYEQSKKEREARKNQKQVDVKQIRLEPKTDEHDLDVKAKQARRFLLDGDKVKFNLRFRGREIFHQEIGLEMLERMAEELRDVSVVEQRPTMEGRVLTLLLAPNQKARTQAQRERQQQAPRTPTQAKSQVSVPASDAAPDDQSDEEE
>NC_009767.1|WP_012119956.1|1828274_1829063_-|DUF4058-family-protein
MEPPFPGMDPYLEHSSLWPDVHTGLITAMRDDLQARIAPGYIAQITPYVALEQIEIAAPRRALVPDIGVYEREPAAIAAASVDAPTLTGVALAEIPTRYARIEIRSVVDETLVTAIELLSPVNKRPGPDGADAYEKKRQELFMSGVHLLEIDLLRGGKRPNLARPDPLPNAPYFIFLSRAERWPAIDIWTCPLQQPLPTVPVPLRRPDPDAPLPLTRLVHQVYRNARYDLRIDYRQPPPPPDLSPEDAAWLDAHLRAKGLRP
>NC_009767.1|WP_012119955.1|1827260_1828049_-|DUF4058-family-protein
MEPPFPGMDPYLEHSSLWPDVHHRIISAACDYLQARIAPGYIAQITPYVALEQIEIAAPRRALVPDIGVYEREPAAIAAASVDAPTLTGVALAEIPTRYARIEIRSVVDETLVTAIELLSPVNKRPGPDGADAYEKKRQELFMSGVHLLEIDLLRGGKRPNLARPDPLPNAPYFIFLSRAERWPAIDIWTCPLQQPLPTVPVPLRRPDPDAPLPLTRLVHQVYRNARYDLRIDYRQPPPPPDLSPEDAAWLDAHLHAKGLRP
>NC_009767.1|WP_012119954.1|1826298_1826952_-|thiaminase-II
MRFTETLWSSITGIYQAIIQHPFNEELAQGTLSHEKFAFYMQQDALYLADFARALATMAGRAPDEEAIIQFARFAEGVAVVERALHFTYFREFGIDAPTRQQSPSCFAYTNFLLATTAGRSYEEGMAALLPCFWIYREVGSDIYRRAAPNNPYQKWIDTYAGQEFAEWVNRAIDLTDAIADQASEPQKARMRDAFVHSSRLEWMFWDSAYRLEQWMP
>NC_009767.1|WP_012119965.1|1839112_1840699_-|helix-turn-helix-domain-containing-protein
MRSVTPELELPRLTSADLIERFGNDEVALRRYRMLAALLREGRAPGEVARTFGVSRESLRRLREAFRHGGLAALKSRKRGGGHFVRNSPLARALRQELAAEPGIAANVLWRRVQARLRNEGILDVPRSTFYRLLARLRDEESGIGAQSATIRLLREALVALPEDPPLTLGRSDLAKLLLADETDVQQRGRRLQAALRAAIEQLRPPDDAGPVLNDPRWRHYLIIAGEYEAGETRVDLQEALALSASTYSRAKREALERLATLMPAAIEALPPPAPPAHFYAPPSASVVGYETELDLYVASLRRDSLALIWGDTEEAFALSAALASHLHTRGQKVIWHAAAPPDIELRPGLRLLQTLAAALAAEGDDELWRHLALPEAIPQVWHLDLLANTIGGRRWTVVVANTHWLTDSDAVQTLDVLTTAYEQREIRLALAGRNLPLWADADRWPPLPGDQSALPEFLQRLARRTVTAQAPFSVEVVRERAMQLIDTLPINQVAFLQPDERDRLIAALAPVEQLLVTLRGAAGQMPP
>NC_009767.1|WP_012119966.1|1841174_1843607_-|CHAT-domain-containing-protein
MPVDFDKLTLTPISACLVVEETASLWQIHAMLPPDRNDRLYRFVIVPRADGMFIVARWIEVEEIVHRLMRYQDVRGWTLPELAACPLPLNYVEPDEHLTTKLAEVPLATLIQRLSPVQGMDRQANSTYEARTVRDRHPGRRVVVLDSGTIYGVIFAELLTAGNVAFDPFRRETASAKPPMADDGDAMGDIEPDLLRSAAPLPEQITDVERSGSVTPESLPAERTPESALLNQIAGAQDDRVFNLWIEQRLQREVEITGGGRTLTRIVPPGEALAIGGMYAVNVNVAPPLASAHVRTGGVEQAEAMSAAAQIEVDVRLVADSAFFKVYGIPQQKIIFPRGGVSKNIAGFIIEPIQQGIGEITALLSLNQKPFQKIVAQVAIGEAALADLPAEPVRASGLTLAAATATTRSPLAYPTEMDASLIIIRETTGYTFILSLGSGYTVARLNLAEKEIVDVIRRARAAFLEKIVKRLDTARNVYVYQLKDTTIPETIHQEALRDLRQIGDLLFRSLFFAPGSGDDGKELGRLLRTATAERELRINVIAERFAFPWSLVYALPFKPSDPVDPMGFWGYRHIIEHTPQFSARQPAVFAPELNTSERLHVGFVFDQTIDTQFNAPIIAEQRQILPGIDGVAVTEYGTRDAFLDLLSRSQNVPQIIYFYGHAVSRSPGEKDAATGIEYGLGDSYLSVNGEAVTLDDMNLYAGLDLDRFDSAPLVVLNACESAELSPELYNGLVPYLIGRGARGIIGTEVLMPAFFAAEFAPALLRRFVAGNTRLGDLLRDMRREYLREKRNVLPLIYALYSNAELIVKRG
>NC_009767.1|WP_012119967.1|1843951_1844203_-|hypothetical-protein
MPVDFDKLTLTPISACLVVEETASLWQIHAMLPPDRNDRLYRFVIVRRERREARGGRGKRQERQEARGGRRAVETVRCNVSTG
>NC_009767.1|WP_012119968.1|1844612_1846547_-|N-acetylmuramoyl-L-alanine-amidase
MASLLRQRGVRLTSQDVTTGTPPMIGRCLTIPQWLDYVARYQFGQLTPSKVVLHHTWRPTVQQWRGLASMQGMQRYYANKGWASAPHIYVAPDGIWLFTPMKDIGIHAGPGNGSLKAGWYSIGVEMVGDYDRERPSGAVWEGTKAVLGGLSRRLNIPPATLLAFHRDYSKKSCPGWAVTKEWVLGEVNAWLNNAAPPPPPPPGPIGSIPPEIEELAEALLEQSYARRAEGYNSSWAFHQFAVENNLGFPMAKSQRLQHGGKTYAYQPFARDTLFCESPNWGDVQRLSQLLAGSIPPPGTLGRALLDATYATGGSPFRPDWAFHQYAVAGQTLGPPLEPSKKLVVDGVSYSYQVFATDTIFNRGTEWQNIQRLSALANTTNPAQAKVRDELLKATYAAAGQQYRPDWAFHQLARQWNLGAPLGKTDPITVGDKQYNFQVYATDTIYNIVPNWSDVKRLSAIFGPQQMLLAAPAPVARLLSPGAVFAPEWDAFHIQRFAVAGRAPSAYGSRSGSKIRLIVLHGDAGPALQSLETMAMPGSPRMPHYYVAAHGAIYQLIDDEFAAFHSGMAYWDGARRNINRSSIGVMLERPHTGYTDASQRALSWLIAHLRAKYNIPASGVVRWSDLSPDAAGDLADLPGNWYREG
>NC_009767.1|WP_157042584.1|1846806_1847334_-|hypothetical-protein
MGWDADDVDTPVCAVIARPAQPVEARSSLRHRRRRAKQSRHSATGAAGRSNPPAGHASARCHCEPPQAAKQSRHSATGAAGRSNLVTPPPAPPGEAILPPGTPVRAVIASRRRRRSNLVTPPPAPPGEAIPPAGHASARCHCEPPQAAKQSRHSATGAAGRDRVLPMPSSATGCT
>NC_009767.1|WP_041330375.1|1847317_1847896_-|peroxidase-related-enzyme
MDAPEHPISRFPLPVRIDELPPDIRKRIEQVAVKSGFVPNIFLALAHRPDEFRAFFAYHDALMNRPSNLSQAEKEMIVVATSAVNDCLYCVIAHGAILRIRSKNPRLAEQIAANYRRAEITPRQRAMLDYAQKVAVDSARISDDDWQPLYQHGFTQEDIWEIGAIAAFFAMSNRLANMSALRPNDEFYGMGR
>NC_009767.1|WP_041330377.1|1848920_1849877_-|alpha/beta-fold-hydrolase
MSRFWRLAPFLAGLGAGIAVGPTAYRTTEALRLMIFSTRQPLWRFPADLNLRAEDVTFPSQDGVTLRGWFIHRANADGSPAPTIVFIHGWPWNRCGNRAGATLLPDRTIDFLEPAAAFSRAGFHVLLFDLRNHGLSDARIPVTFGVNEARDVIGAVAMLRARQDVDGGRIGLIGYSMGANAALCAAPECAPIRGIVAVQPTSAQVFAPNTARDVLGPAGPTLIQIGGLIHRAFGAPPLSAIAPAAWVHRLRDTDVLYIQGAGDRWGSLADVAAMAANTPRARPVVAAPSNERYGGYLYVAGHVDAIIAFFRESLGVEG
>NC_009767.1|WP_012119971.1|1849875_1851570_+|gamma-glutamyltransferase
MVSLLILYTVLHYSTLFTSLTTKETPMPGMIVAPEPIAVESGARALMNGGNAIDAAVTCAFVQMIVNPQMCGLGGYALAVVRLAGEPAARTILLDAPALAGSRVRSDMWVDRVIGMNPDGWGYFLTDKVNDVGYRAICTPGAVKGLATLLERWGSISWAQALEPAIRVAEEGFMVDSVLASRWKTRALYPEASSLLDYILANEEARRIYLTADGRPYDEGMILRNPDYARTLRRLADAGPDDFYHGELAQRIAGDITANDGFVTAEDLADYALREEPPTIGTYRGYTIVSSQAPHGGPTLIEVLNILEGYDLRELEHNSADYILTVAMAMKAAFADRNRFIGDPAFEAVPLDRLTSKERAAQWRTRIDARQPIDVEALPGGPPDTTHVSVVDAAGNCVALTHSLGMSSGVITPGLGFMYNNSMINFNPIPGHRNSIAPRKGRTTGMSPTIVYADNRPVLVLGAPGANRIITGVLQVLVNIIDFGMSPAEAVQAPRFDCQGERIVVQNRIPEYICDTVREHYPVVRAPQSYGAFGLVQVISIDPVRGGLRGASDPGGAGMALHIG
>NC_009767.1|WP_012119972.1|1851784_1852102_+|hypothetical-protein
MAKRSARDLFGAFIGCIGSLAMLAALLPGLLSSAIGMILIGGAIMTGIVIVLSDLLSGRNALKSLIGVVLMGMLVFAFVYAPLWYLSSLAASGDLLRFNFSGVTP
>NC_009767.1|WP_012119973.1|1852363_1852885_+|gamma-carbonic-anhydrase-family-protein
MTEPFTFPDITDRLDIHPTAYISPYAYVHGTVSIGADSSVWPMVVIRGDNGFIRIGARCNIQDGSVLHADPDARLTIGDGVSIGHAAVVHGCTVEDDVLIGIGAVVLNHAQIGAGSLIAARALVTEGMIVPPGSLVMGIPGVIRPLGEGRLERIRRTAQRYVALKERYRSSGA

Crispr_ID: NC_009767_35

• CRISPR_ID: NC_009767_35
• CRISPR_location: 1960394-1960510
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: DinG

Consensus repeat of NC_009767_35

Consensus_repeat	Method
ACGTGGGAAGGACGCCTCGACCTTTGAGGTCTGCGCCAGGGG	CRISPRCasFinder

spacers of NC_009767_35

>35.1|1960436|33|NC_009767|CRISPRCasFinder
GTATATCTCTCCTTTGGGGGTAAATGGCGCTCT

CRISPR arrays and Neighbor proteins around NC_009767_35

CRISPR arrays

The CRISPR arrays of NC_009767_35

>merge|NC_009767|35|1960394-1960510|CRISPRCasFinder
ACGTGGGAAGGACGCCTCGACCTTTGAGGTCTGCGCCAGGGGGTATATCTCTCCTTTGGGGGTAAATGGCGCTCTACGTGGGAAGGACGCCTCGACCTTTGAGGTCTGCGCCAGGGG

>NC_009767|35|30|1960394-1960510|CRISPRCasFinder
ACGTGGGAAGGACGCCTCGACCTTTGAGGTCTGCGCCAGGGG	GTATATCTCTCCTTTGGGGGTAAATGGCGCTCT
ACGTGGGAAGGACGCCTCGACCTTTGAGGTCTGCGCCAGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120062.1|1964852_1965968_+|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase	unknown	unknown	gnl|CDD|237458
NC_009767.1|WP_012120060.1|1963531_1964245_+|magnesium-protoporphyrin-IX-methyltransferase	unknown	unknown	gnl|CDD|236059
NC_009767.1|WP_012120058.1|1961007_1962699_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	unknown	unknown	gnl|CDD|235085
NC_009767.1|WP_012120065.1|1971247_1972381_+|magnesium-chelatase-ATPase-subunit-I	unknown	unknown	gnl|CDD|131085
NC_009767.1|WP_012120048.1|1945523_1945982_+|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|273179
NC_009767.1|WP_012120059.1|1962719_1963541_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein	unknown	unknown	gnl|CDD|237293
NC_009767.1|WP_012120064.1|1969931_1971233_+|BCD-family-MFS-transporter	unknown	unknown	gnl|CDD|349950
NC_009767.1|WP_012120066.1|1972430_1975265_-|DNA-polymerase-III-subunit-epsilon	DinG	COG1199_DinG_CAS-IV-A	gnl|CDD|236148
NC_009767.1|WP_083760293.1|1965870_1969902_+|magnesium-chelatase-subunit-H	unknown	unknown	gnl|CDD|237117
NC_009767.1|WP_012120049.1|1946002_1946275_+|30S-ribosomal-protein-S18	unknown	unknown	gnl|CDD|178997
NC_009767.1|WP_012120061.1|1964473_1964803_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120067.1|1985595_1986717_-|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl|CDD|234832
NC_009767.1|WP_012120056.1|1958193_1958991_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009767.1|WP_012120053.1|1951568_1954430_-|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl|CDD|236499
NC_009767.1|WP_012120055.1|1956804_1958178_+|BCD-family-MFS-transporter	unknown	unknown	gnl|CDD|349950
NC_009767.1|WP_012120057.1|1959148_1960393_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	unknown	unknown	gnl|CDD|235076
NC_009767.1|WP_012120054.1|1954821_1955847_+|acyl-CoA-desaturase	unknown	unknown	gnl|CDD|239583
NC_009767.1|WP_041330409.1|1949237_1950149_+|hypothetical-protein	unknown	unknown	gnl|CDD|378504
NC_009767.1|WP_012120052.1|1950354_1951554_-|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl|CDD|235571
NC_009767.1|WP_049768808.1|1946385_1947906_+|peptidylprolyl-isomerase	unknown	unknown	gnl|CDD|372650

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012120066.1|1972430_1975265_-|DNA-polymerase-III-subunit-epsilon	DinG	COG1199_DinG_CAS-IV-A	1.2e-141	467.8	0.5

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120060.1|1963531_1964245_+|magnesium-protoporphyrin-IX-methyltransferase	gnl|CDD|236059	PRK07580, PRK07580, Mg-protoporphyrin IX methyl transferase; Validated.	6.63359e-125
NC_009767.1|WP_012120058.1|1961007_1962699_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	gnl|CDD|235085	PRK02910, PRK02910, ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit B.	0
NC_009767.1|WP_012120065.1|1971247_1972381_+|magnesium-chelatase-ATPase-subunit-I	gnl|CDD|131085	TIGR02030, Magnesium-chelatase_subunit_ChlI, magnesium chelatase ATPase subunit I. This model represents one of two ATPase subunits of the trimeric magnesium chelatase responsible for insertion of magnesium ion into protoporphyrin IX. This is an essential step in the biosynthesis of both chlorophyll and bacteriochlorophyll. This subunit is found in green plants, photosynthetic algae, cyanobacteria and other photosynthetic bacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	9.35182e-179
NC_009767.1|WP_012120048.1|1945523_1945982_+|single-stranded-DNA-binding-protein	gnl|CDD|273179	TIGR00621, Single-stranded_DNA-binding_protein, single stranded DNA-binding protein (ssb). All proteins in this family for which functions are known are single-stranded DNA binding proteins that function in many processes including transcription, repair, replication and recombination. Members encoded between genes for ribosomal proteins S6 and S18 should be annotated as primosomal protein N (PriB). Forms in gamma-protoeobacteria are much shorter and poorly recognized by this model. Additional members of this family include phage proteins. Eukaryotic members are organellar proteins. [DNA metabolism, DNA replication, recombination, and repair].	5.85983e-58
NC_009767.1|WP_012120059.1|1962719_1963541_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein	gnl|CDD|237293	PRK13185, chlL, protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional.	0
NC_009767.1|WP_012120064.1|1969931_1971233_+|BCD-family-MFS-transporter	gnl|CDD|349950	cd06176, MFS_BCD_PucC-like, Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily. The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.01509e-139
NC_009767.1|WP_012120066.1|1972430_1975265_-|DNA-polymerase-III-subunit-epsilon	gnl|CDD|236148	PRK08074, PRK08074, bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.	0
NC_009767.1|WP_083760293.1|1965870_1969902_+|magnesium-chelatase-subunit-H	gnl|CDD|237117	PRK12493, PRK12493, magnesium chelatase subunit H; Provisional.	0
NC_009767.1|WP_012120049.1|1946002_1946275_+|30S-ribosomal-protein-S18	gnl|CDD|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	1.47155e-36
NC_009767.1|WP_012120062.1|1964852_1965968_+|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase	gnl|CDD|237458	PRK13654, PRK13654, magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional.	0
NC_009767.1|WP_012120067.1|1985595_1986717_-|3-isopropylmalate-dehydrogenase	gnl|CDD|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NC_009767.1|WP_012120056.1|1958193_1958991_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	2.34016e-27
NC_009767.1|WP_012120053.1|1951568_1954430_-|2-oxoglutarate-dehydrogenase-E1-component	gnl|CDD|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NC_009767.1|WP_012120055.1|1956804_1958178_+|BCD-family-MFS-transporter	gnl|CDD|349950	cd06176, MFS_BCD_PucC-like, Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily. The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.95011e-121
NC_009767.1|WP_012120057.1|1959148_1960393_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	gnl|CDD|235076	PRK02842, PRK02842, ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit N.	0
NC_009767.1|WP_012120054.1|1954821_1955847_+|acyl-CoA-desaturase	gnl|CDD|239583	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; and acyl-CoA desaturases are present in ER membrane. ER-bound plant acyl-lipid desaturases and acyl-CoA desaturases require cytochrome b5 as an electron donor. Most of the eukaryotic desaturase domains have an adjacent N-terminal cytochrome b5-like domain. This domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain the residues: HXXXH, HXX(X)HH, and Q/HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase.	1.49509e-62
NC_009767.1|WP_041330409.1|1949237_1950149_+|hypothetical-protein	gnl|CDD|378504	pfam10882, bPH_5, Bacterial PH domain. This family of proteins with unknown function appear to be related to bacterial PH domains. This family was formerly known as DUF2679.	5.08277e-20
NC_009767.1|WP_012120052.1|1950354_1951554_-|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl|CDD|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
NC_009767.1|WP_049768808.1|1946385_1947906_+|peptidylprolyl-isomerase	gnl|CDD|372650	pfam13616, Rotamase_3, PPIC-type PPIASE domain. Rotamases increase the rate of protein folding by catalyzing the interconversion of cis-proline and trans-proline.	2.045e-22

Protein sequences

>NC_009767.1|WP_012120057.1|1959148_1960393_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N
MSATVIREDGAYHSFCGLTCVGWLYQKIKDSFFLVLGTHTCAHLLQNVLGVMVFARPRFGVALIEEADLSKQQPELNAIIDEIVADHHPSVIFLLSSCTPEVMKVEFDGLARAVSRPNLPVLFVPASGLDYTFSQAEDSVLQALLPFCPVAPADDRRVVFLGSVNDAIADDFHTEAARLGIPVAGFLPESHFRDLPPIGPGTVVAPLQPYLAKVAGRLARERGATVMTSLFPFGPDGTRAFWEDLAAAMGKAVDLSERERQAWERLEPHLEILRGKKVFFTADNLMELPLARFLRNAGCIILECSSPYINRKFHARELAALDGVRVVEQPNFDRQLRDIRALRPDLVISTLATTNPLVGHGVVAKWSTEFSFMPIQGWSGAATLAGMFTRPLKRHAQLDPLMDDPLWVAGLMPG
>NC_009767.1|WP_012120056.1|1958193_1958991_+|class-I-SAM-dependent-methyltransferase
MTEVLPIRFDAIAGAYDQVRGHPPEVAEQIGRAIAALVGNNAHVLELGVGTGRIALPVATAGCRVVGIDISAEMLHTARAKEGGGALRLLQGDIERLPFADAVFDATLAVHVLHLARDWRGVLAEALRVLRPGGVFIQGRDWRDPQSCVGRLRSKLRETLMDLLPGSRPPGAGAAVGQALVKLGATVEPEMVAAAWVAPISPAQVLEEMESRSDAETWVLDDATLSAALERLRAWAASVYDDLNRTEMVERRFVLQAARFGAERP
>NC_009767.1|WP_012120055.1|1956804_1958178_+|BCD-family-MFS-transporter
MNLLRTIGRFLLGALKVLRLALPKLGVGWMFALLTSNFNRVSIVELGVMAVIVTTMIGLHHFLSPFQVVWGRIADNHPVFGLRRTPYLLLGATVASLVFLALPSVALAMGEGSVLAIVAGYALLIIFGISIAAMGDCHHALIAEVTNPKTRGGVIAVVWTFTIMSTIIAATVIKARMPAYTPESMQALYNLTPLVVIGATLLGVLGIERRLSRQELAVALERARAAAPPGNPLSAAFGLLRQNPQVRAFFGFVFLSIIGIFLQDSILEVFGAEVFHMTLKETTTFTQTWGGGVLGGMLIMGLLSAIFPIGKKLIALIGGVGTAFGLGLLAVCALTEQRALLNPAIMLMGVSTGLYNVGALSLMMDMTVEGATGLYMGMWGMAQAFGTATANILAGALHTVLIEAQALSQTLGYGVIFGLEAVLMIVGIALLSGVSVEAFRGLTRADITRAMEAGAVA
>NC_009767.1|WP_012120054.1|1954821_1955847_+|acyl-CoA-desaturase
MSSVSNAEYIALKKLIKERGLLDKQPWFFIGVIALKVGMLVASIIILFLVDNLWIQALNAIFMGFVLAQIGFTSHSACHRQIFHKVGWNDVVGIFLGNLLLGLSAEWWTGKHNAHHAHPNHDGMDPDLDVPVVAFTPEQAESRRGIWRWMVKHQAFLFFPLLTLQGYALREVSYRFVLSPESRRRGIEIAMMALNLVWYPTLPILALGPVAGIGFILISQAFFGVYLGSVFAPNHKGMLIVDDNTQIDFLRLQVLTARNVSGHPITDFWYGGLNYQIEHHLFPSLPMHRLREASMIVKEFCAGHGISYHETSMIQSYREILGYLHEIGASLRAPKAVSSSV
>NC_009767.1|WP_012120053.1|1951568_1954430_-|2-oxoglutarate-dehydrogenase-E1-component
MPADTLFHGPNAGYVIELYERYRANPESVDPATRTFFAHWSPEEIATVAVATPPPAALPMIDLQTAPDIDLSKAHIGPTSPIDVTHTVAAARLIRYIRELGHLAARIDPLGSDPPGDPGLDAAIHDVTDADLALLPAYIVRGPLAAESRNALDGVQKLREVYCGTIGYETDHVQVFEERAWIRDAVESRRFFYGFDDVRKRELLERLTEVETFERYLHQTFVGQKRFSIEGCDMLIPMIDSIIRNAAVGGVREVVIGMAHRGRLNVLAHILGKPYSAILSEFLTAGRDAALSPAGRGAAGWVGDVKYHLGAHRAFREAGIEQMPITLAPNPSHLEFVNPVVAGRARAVQEQCDQAGAPVQDKRASLPILIHGDAAFPGQGIVAETLNLANLAGYSTGGTIHIIVNNQIGFTTSPREGRSTLYASDLAKGFEIPIVHVNADDVEGCIAVARMAYAYRERFGKDFLIDLVGYRRWGHNEGDEPAFTQPTMYTIIARHPTVREQWASKLIAEGVISAEESNQMMTTVWDRLQQARSEAEAHPHFEEPPPSPPPGIARRTHTAVAAERLVALNEALLQWPPGFRAHPRLERMLERRRTALHMPGAIEWAHAEILAFASLLEEGIPIRLTGQDVERGTFSQRHLVLHDAQTDERWCPLQALPQARASFAVYNSPLSEAAALGFEFGYSAHNPQALVIWEAQFGDFANGAQVIIDQFIVSARKKWGQTPALVMLLPHGYEGQGPEHSSARLERFLQLAAEDNIRVANCTTAAQYFHLLRRQALLLNADPRPLIVMTPKSLLRHPRAASSLHDLSEGRFQRVIDDPQARERPADVARLVLCSGKIYVDLLSASDTPLTNGVAVVRLEELYSFPVDELRDVLAGYPNLQEVIWLQEEPENMGAWRYVAPRLRELIGPDLTLSYVGRPASASPSEGSLALHLIEQQRLIAEALRAPAVEQYH
>NC_009767.1|WP_012120052.1|1950354_1951554_-|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MAVEIKVPTLGESIVEATVGAWRKHEGDPITAGEVLVELETDKVTVEVTAEESGVLSHILKPDGAIVTMGEILGIIAETAETPVAAQSHDGASGTRVMATPVARRVAETQGVDIAAIPGSGPGGRVTKEDVLKRERAPRPAPMEHTPPPPAPTSAPPPVPAPVSGEGRREERIRMSRRRQTIAARLVEAQRTAAMLTTFNEIDMSAVIDLRKRHRDPFRERHGVGLGFMSFFTKAVIGALKAFPLLNAEIRGDEIIIKHYYDIGIAVSTDEGLVVPVLRDANRLSFAEIERGIEELARRARESKLTIADLQGGTFTITNGGIFGSLMSTPILNTPQVGILGMHKIQERPVALDGQVVIRPMMYVALSYDHRIIDGREAVSFLVRVKELVEDPERLLLEG
>NC_009767.1|WP_041330409.1|1949237_1950149_+|hypothetical-protein
MRHWKPRSAHGRWMALGLLILALGGVTLAVVDLIRRLSGSPETWQIDIGALGWLLLLIGSLLAALWSAHRLMSALTLTYDIDRNGLYIRWAGNQVIIPLDRIITIDVGAGPVFLPFGPFQRVGTYWGRAFTGEAPLYLYATQPPGECLIIYTADAAYALSPEDPDAFVQDLEQRRSLGATKVLQPSLEHSRVFHYAFWRDRTVLALVLAAMMINLLAFGLVAVAYPSLAPLVEMRFDATGELAELRPRHQTLFLPLAAFGLSLLNTTAGLALYRSLPLGARLLQGASVIVQLLFLVAVVQILW
>NC_009767.1|WP_049768808.1|1946385_1947906_+|peptidylprolyl-isomerase
MTSNQRKPQPPRSTGARAPAPPRRHLRRSEIERRRQRAIVIGTVVVVALALIAITAGLVYERLWLPGRPVAQVGDVTLTRGDYEAERRGEAARSIAQSLYLATFGSQFAQQFLDQIPQIDAQAVAARDEPVDDALVQQWIDLQLIRQGAQTGFAIQVTDGEVAQEFINLYGAEFAPPVDAVTPTAVLPPTLPPTSQSEPTIGPGTPSPTPAGPTATPTPSPTPEPTQTPSPTPLPDEALARQQVALQRLYDEYVNEMRRVDPQRRIHLTIDDFRRGLYAQFLRQVLTSKVQEQLVPDATFTPTTDPSSIEVRHILLKVTVPLTATEEERERAFAARRAEAEALLADARAAADFAELARERSEDFNTKETGGTLPLFDKDGKTTDGRQIDPAIVQAIANAAENDIVGPVRTSFGWHIVQLVRRTVDTREVQLNKARAEAFERWLEEQRAAINIQRFPTLVPTPSPLPTGTPAPLPTVELGGEPTPTPLPTPTETGVPQGTPEITPTP
>NC_009767.1|WP_012120049.1|1946002_1946275_+|30S-ribosomal-protein-S18
MTDDQTRRSAGASRRRFGARRKVCAFCADKIRVVDYKDVKRLQRCMSERGKILPRRRTGVCARHQRSLTVAIKRARHMALLPFVAAHMHS
>NC_009767.1|WP_012120048.1|1945523_1945982_+|single-stranded-DNA-binding-protein
MAKDLNKVMIIGRLGKDPEMRHTPGGSPVTTFSVATGRQWKDGSGELHEETEWFNVVTWNKLAEICYEHLRKSSRVYIEGRLQTRHWEDQNGVTHYRTEVVASDMIMLDSRVPREPSHYSDEPPYHQPDHRSPARGQQAKDDFVIGDEDIPF
>NC_009767.1|WP_012120058.1|1961007_1962699_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B
MRLALWMYQGTAHHGVGRIANSMRGVHAVFHAPQGDDYVNPIFTMLERTPDFPRMTTSIVSGRDLAQGTVRLPETLRQVDAQVQPDLIIVCASCSTILLQEDLERMAHSAGTRAETLVYDANPYRMQEVRSADGLFTLLTQRFARSQPPTAVPSVNILGPASLGFHNRSDLICLRRMLATLGVQVNVVAPLGASIRDLERLPAAWATIAPYRELGQNAARWLDEQFGVPALTDSPIGVQPTLRWLRRLVETLNDAGERLQRLTNPLRLPPLTAFSLDGMSAPSSVPWFARTADMESYSMKRAFVFGDATHTVGMVKFLRDELGMQIVGAGTYLEHEADWVRGELQDYLPADETGSIDTSFLVTEVFQDVARRIADLTPELVCGTQMERHACRKLDLPCMVIAPPTHIENHLLSYRPVLGFDGADVLADTVYTTATLGMEKHLIDMFGDAGLEYEEPRTERREAEFGNQKVETGEPGTGAPVIAHADSNGGVAGSSSTLAAQTVTASPRLVTPVWAPEAQAMLKKVPFFVRGRVQKNVERYAAQHGYATITAEILVEAKEALGG
>NC_009767.1|WP_012120059.1|1962719_1963541_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein
MSLTLAIYGKGGIGKSTTSSNLSAALALKGAKVLQIGCDPKHDSTFALTGMLQPTVIDVLTEVDFHHEEVSVEDVVHTGFAGVDTLESGGPPAGSGCGGYVVGETVKLLHEFGLYDKYDVIVFDVLGDVVCGGFSAPLNYADYGVIIACNDFDSIFAANRLCLAIKQKSARYRVELAGIIANRVDYELGGGTTLLEQFAETVGTQIIGRVPYHDLIRRSRLMGKTLFEMEGPGKEECTTPFLEMAEYLLNRPRSTVPKPMGDREIFNVIGGWR
>NC_009767.1|WP_012120060.1|1963531_1964245_+|magnesium-protoporphyrin-IX-methyltransferase
MAMIDITRHKNTLRDYFDRDGFRRWSAIYGDAEVSRIRRTIRVGHARMLARAETWLLEWIGATGRAPSSLSALDAGCGTGLFSIMLAQHGINVTAVDIAPQMVAAAAERAQTAGVAQRITFTAGDIEDVAGVFDVVACFDVLIHYPQPAFDQLLRHLAQRARGMLLFTYAPYEPFLAAMHWIGGFFPRAHRRTEIQMIRENDVRRLVAGHGLRVGRIEPIRSGFYHVNLVEARGVRG
>NC_009767.1|WP_012120061.1|1964473_1964803_+|hypothetical-protein
MKRLLLALPALIAGGLWLWYRREKVMEGEGVVYLQSEHEHFHLHVDLPPGMEIEPGDTLEILTVPQTHGQTNGEMTYSSRIRLTKASSLRRELVKRSSLVEINELVEHP
>NC_009767.1|WP_012120062.1|1964852_1965968_+|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase
MINMPGEYSPTTRHALREAILNPRFYTTDFRAIDRLNVAHMRDEFDWIRNEFEFDYNKKHFVRNEEFLANFDDMPARDLFIEFLERSCTAEFSGCLLYAEMVKHLHDPTLRAIFRCMSRDEGRHAGFLNKTMADLGVEMNLQVLHTRKKYTYFQPKFIFYSVYLSEKIGYARYITIYRHLQHHPQGMIHPIFKWFEKWCNDEYRHGEFFSLLMRSQPDLLRGGNLRWIRFFLLAVYATMYLNDARRAGFYEALGLNWRDYDQRVIRLTNHIATQVFPVTLPVDDPRFFRHLDACVRYDAQIRALEGRNDPIAQVQRARLGAGIAARLLATYRLPPAPTTDANRWKGLEGFPNYPGPGWKQDASLNERVISA
>NC_009767.1|WP_083760293.1|1965870_1969902_+|magnesium-chelatase-subunit-H
MPIVGRVSKASRTIPVRAGNRTHHSTNGSYQHKSPGFRGGLGVAHRITSHPEPLTHKDSAMRFVFLTMDGNHFAALREGAGLLHRDEGIALSLACYDTNALRTAADWQRLTDDVAASDFVFGSMLFGEDFVRPLEPILAQATAPVCIITSNPALIRTTRLGRFDLRKKVEEQEASLLSRWMHKFRPKNGRGEGQRQLALMRNLGRVLQHIPGKARDLATYVAVHQYWMHSSPENLRRMLVMLIERYVPGYQGRLKVLPPIEYPDVALLHPDAPEPFADEREYEKWLAQRAKRRKNEPRQGAVGLLTLRTVALSGNMAHLHALYRALEQRGLDVRMAYAAGLDFRPAIERFFLERESRMHWFGSGNAGPHPRRARIDALVNGVGFALVGGMAASQPDEAVAALRDLDTRYLGFIPLSFQRVEEWRRDDSGLTPIQVAMNVALPELDGAIDPLVFGGPTVDSDRFVPLPEQIELAAERIARHVALRRTPPRTRKLAIVLFNFPPTLGNAGTAAYLDVFASVHRLLCALCDAGYTVEVPASPEELRHLVVQHNADLFGTPGSVAARLSINDYRRLFPAYTAIEPFWGAAPGELLTDGRDFFICGHVFGNVFVGLQPSFGYERDPMRLLMAKDAAPHHGFAAFYTWVAHVFGAHAVLHFGTHGALEFMPGKQSGLSAQCWPARLLGPLPNIYYYSVNNPSEGTIAKRRSAATLVSYMVPPLQQAGLYKGLRRLKDSLDAYRARPQSGMLDDIRAQAEQLGIGSELVDIKNDEAYVAALAHELLQIEQRMIPVGLHVLDKEPNPAELTDVLALVAAFACPSGVEQPLTHLVAAAMGYDYGRLQAALGHDPQAQEVFQQIDALVRDAMRALVDEYRNRAFSSPVPGVTFEQTLLQRASVSVGVLRRFRIYLEELLDRMMHDHELRNLLHALDGGYIPPSPGNDVVRNPAVVPTGRNIHGLDPYRVPTAVAQATGERLVSDLLARLCREQGRMPESVAIVLWGTDNLKSDGEGIAQALALMGARPVADELGNISDVALIPLAELGRPRIDAVMTVSGIFRDLFSHQMQLLSKAARLAAHADEPPEWNYVRKHALAHAVELGISLDEAATRVFSNAPGSYGANVNHLVESSTWNSDAEMSEAFVSRKSFAPGAHGEWRDARAVLERALATVDATFQNVDSFEIGISDIDHYYEYLGGVTKSVEKLRGSRPRVFVAEALATTGERISTLEQQVRIETRAKLLNPKWFEAMLAHGYQGVHEIEARVGNTYGWSATADAVEGWVYQGVAETFMLDETMRERLARLNPHAATAIAGRLLEAHSRGFWQADEATLDALQAIYADLEDRLEGVAVER
>NC_009767.1|WP_012120064.1|1969931_1971233_+|BCD-family-MFS-transporter
MTLIKNIRLGLLHVAIAMTFVLINSVLNRIMIHDLGILASVVAVLVVLPYILSPAQVWIGQYSDTHPMFGYRRTPYIALGTLLALAGAALAPHAALALVRDPLIGVPLAILLFGMWGVGYNLAVVAYLALASDMSTEQQRSRTVAIMWFMMIASVIVTAIVVGRALEPYSEERLFTVFLETGGVALALALVGLIGLEPRREPIAVQQSRAGQVAAIRAVLDNPQARIFFVYLIMMLAAILGQDVLLEPFGAQAFGMNVKETTQLTAMWGGATLSALLLYGAVLSRWMSKKRGAMIGGSIAATGFLLIALSGMLAIEAMFLPGIVLLGFGTGIATTTNLALMLDMTTAEQVGLFIGAWGVADALARGVGTLLGGVMRDVIAHMSGSAVSGYVSVFLIEALLLGISLVLLQRIDVTAFRSRQPSLTELVALSGDA
>NC_009767.1|WP_012120065.1|1971247_1972381_+|magnesium-chelatase-ATPase-subunit-I
MTTTSVETQNGKTTDSGVTTLPVYPFTAIVGQAELKLALLLCVIDPTIGGVMVMGHRGTAKSTAVRALAALLPPQRAVAGCPYGCDPAAPSSICPHCAAPDQDAAKNGQEKRRASAKRPPSVLRPVPVVDLPLGATEDRVVGALDIERALVEGVQTFAPGLLARANRGFLYIDEVNLLEDHLVDLLLDVAQSGVNVVEREGISVRHPARFVLVGSGNPEEGDLRPQLLDRFGLHARITTIDDVAERVEIVKRRRAFDADPVAFAQQWEREQQRLQRRIRMAQKRLPSVELTDEALYAAARLCVALNIDGHRGELTLARAAVALAAFEGRESAQPSDIARVATLSLRHRLRKDPLETSGDDARIERAVAETIGAAARA
>NC_009767.1|WP_012120066.1|1972430_1975265_-|DNA-polymerase-III-subunit-epsilon
MDQIYVAIDVETTGLEAGVDEIIEIAAVKFRTGEVIETFDTLVQPRHSLPLNSSRLTGITAEMLAGAPRFSEVAPRFAAFLKNYPLVGHNVRFDINMLQAQGMRLPQPAFDTFELATLLMPRTPAYRLSALAETLGIVHDEAHRALSDADVTRQVFLHLLRRIDALSLNDLNEIVRLTSRVDWTLRPLFEAAQRAKALRVFVDETPISDTDSRESDEKLTPLKPTGNDRPIDLAEIRWFFSPAGALGRAFEGYEQRNQQVRMSEAVADTLNQGGTLIAEAGTGTGKGLAYLVPAALHAARRGERVVISTNTINLQDQLFFKDIPALQRVMSNGVDDKPPFTAALLKGRSNYLCLKRYHDLRRDRDQRLMSDDVRALLKVQLWLHATESGDRAELPLQEGEHATWSKLSAAWDQCTGPRCSEFHRCFFFKARRQAEAAHLVIVNHALLVADLAAENDVIPPYDYLIIDEAHNLEDVATDQLSFNVDREGLLAFLDDIFVEDQAQIVGGLLSELPNHFRESMVTRIDIDRADTITAALRPAVARARDAVYGCFNTLIAFVRRDAELSAADARLRISSALRRKPAWAEVERAWDMLNNALTAIGEGLGQLETLLIDLKDAELPEYDALMLRVQTLKRYATEVRINIGHILTGGAEEKVTWLTHDRLRDTLTLSAAPLSVAEILRTNLFERKSATVLTSATLSVGGDFRFVRERIGLDEAEELALESPFDYTRQALLYIPNDIPEPSHPGYQRAMEQAIIDLARATNGRMLVLFTAINALRQTYRAIQEPLEDAGIAVLGQGIDGSRRSLLERFKEFPGTVLLGTSSFWEGVDVVGDALSVLVIAKLPFSVPTDPIFAARSEQFDDAFNQYAVPQSILRFKQGFGRLIRSKDDRGIVAVLDRRLLTKKYGQTFLDSLPHTTVRSGPLQRLPDLAKRFLAATNGMSGTA
>NC_009767.1|WP_012120067.1|1985595_1986717_-|3-isopropylmalate-dehydrogenase
MHAVITALPGDGIGPEVVAEGMRVLRAVGTRFGHTFEIREALIGGCAIDATGTALPDETLHLCRESDAVLLGAVGGPKWDNPEAPVRPEQGLLGIRKALGLFANLRPVTLHPRLIAASPLRPERLQGVDLLVVRELTGGIYFGEKGRDTTMDGGESAYDECVYTSAEIERIVRVAATLARNRRKKLTSVDKANVLETSRLWRSVTTRLMRAEFPDVQIEHMLVDACAMHLIRRPMDFDVIVTENMFGDILTDEASMLAGSMGMLPSASLGAPGNNGRGTQMGLYEPIHGSAPDIAGKGIANPLATILSVALLLRHSLGLEDEARAVETAVWRTLEEGIITGDIAMPGERSATTTEVGAAVAAWIEREEARSER

Crispr_ID: NC_009767_36

• CRISPR_ID: NC_009767_36
• CRISPR_location: 1975555-1984892
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 127 spacers
• Cas_protein_info: DinG

Consensus repeat of NC_009767_36

Consensus_repeat	Method
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	PILER-CR
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CRISPRCasFinder
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CRT

spacers of NC_009767_36

>36.1|1975591|37|NC_009767|PILER-CR
TGCCACGGGCTGCACGACGGCCTCCAGCGCACGCTGG
>36.2|1975664|36|NC_009767|PILER-CR
GCGGCAGCGCCGCCGGCAGCACGACTAGCCCGCCGT
>36.3|1975736|36|NC_009767|PILER-CR
CCGGCTGCTGCATGCTGGACTACGCGCGCGTTCGAT
>36.4|1975808|35|NC_009767|PILER-CR
CGCCATCTACGCCGTGCGCGGGATGTGTGCGTGGA
>36.5|1975879|39|NC_009767|PILER-CR
TTTCGTCGCCGAGCGAGCGACGCCGTTTTCCGTGACGAG
>36.6|1975954|37|NC_009767|PILER-CR
TCGACTTCAGGTATTGCCGACCTTTATCTTCTCCTAT
>36.7|1976027|40|NC_009767|PILER-CR
TTTTGATGCGCACTGTTGAGCGCATTGAATACGTTCTTTA
>36.8|1976103|39|NC_009767|PILER-CR
TATGCGGCGTATGAGCGTCGCCGCCCCCGCCGCGAATAG
>36.9|1976178|37|NC_009767|PILER-CR
TCCAGTTTGACGCCGACGCCCGCCGAACCTCGCACGA
>36.10|1976251|41|NC_009767|PILER-CR
TTGCGCGCAAAGAGCACGACTTCATTCGAGGGACCGGCGTC
>36.11|1976328|38|NC_009767|PILER-CR
TGCCAATCAAGAATGGCGCGACGGTCATTCACGTCGAA
>36.12|1976402|36|NC_009767|PILER-CR
TGATTTGCCGAATACGCTCACGCGTAAGACCAATGA
>36.13|1976474|35|NC_009767|PILER-CR
TCGACTGGCGCAATTACATCTTCGCCAATCGTCGC
>36.14|1976545|38|NC_009767|PILER-CR
TGTAAACCTTTTTGTGCGCTTGTATCTCCATACCGTAG
>36.15|1976619|39|NC_009767|PILER-CR
TTACCCCCGCACCCAGCAACCCCGTGCTGATTGAGTTTC
>36.16|1976694|38|NC_009767|PILER-CR
TCATACATCGGGCGACAGCCCATCTCCGACTTGTCCAC
>36.17|1976768|36|NC_009767|PILER-CR
TCGTTTGCGTCTGCGCCATTTGAAACGCCATCACGA
>36.18|1976840|37|NC_009767|PILER-CR
TTCCATGCCGATGAACCGCCCTTGCGCGTCAAAGAAG
>36.19|1976913|37|NC_009767|PILER-CR
TTTATACCCACGATGAATGCGTCCATATCGGTGGAAT
>36.20|1976986|38|NC_009767|PILER-CR
TCTTGCGTCTGGATTGCCTGCAACCGCGACAGATGCGA
>36.21|1977060|36|NC_009767|PILER-CR
TACCCTGGTACTATTCTGAACTAGTACCATTGCCTG
>36.22|1977132|37|NC_009767|PILER-CR
TTTTCGCGAGAGAGAGCACGCCAGTGACCGAAAAAGA
>36.23|1977205|37|NC_009767|PILER-CR
TCGATCCGGCAAGATCGCATTCACATCACGAATATCG
>36.24|1977278|37|NC_009767|PILER-CR
TCAGGTTACCCTGGTCAGCTTCCAGACAGGATTTATC
>36.25|1977351|38|NC_009767|PILER-CR
TAGACATGGACGATTCGTCGCCGCGCAATGTTGCTTGC
>36.26|1977425|36|NC_009767|PILER-CR
TCCTGATACCGCGGATCCATCATCGTCCCGGTCTTA
>36.27|1977497|36|NC_009767|PILER-CR
TTCAGGACGGCAGCCGCCGTCGACCGAAAACCCCAG
>36.28|1977569|38|NC_009767|PILER-CR
TCCGTGCATCGTGGCGTTGGCAAACTCTGCGTTTGGCA
>36.29|1977643|37|NC_009767|PILER-CR
TGTAGGGATTGGTATATTCAGACCGATTCAGCGCCAG
>36.30|1977716|39|NC_009767|PILER-CR
TTCGTTCCGTGAGCGGAAGTATCGTTATCAGTTGCACAG
>36.31|1977791|37|NC_009767|PILER-CR
ACATCCGACCATCGCCCGGCGCCTTTGCGCAAACGCC
>36.32|1977864|37|NC_009767|PILER-CR
ACGGGGAACTCCAATGAGAGGGGAACCAATTGAAGAC
>36.33|1977937|37|NC_009767|PILER-CR
AGGACGACGACGACGGCGGGCACCCAGGGACGCCGAA
>36.34|1978010|37|NC_009767|PILER-CR
TGAGACGCCGAACTCGGACGTCAACCGTGTGGAACGC
>36.35|1978083|36|NC_009767|PILER-CR
TGCGCTCCGGGAGGTATGGGCGTGGTCAACTGGTCA
>36.36|1978155|38|NC_009767|PILER-CR
TCTGGACGCGCGCCGGTGAGACCTGCCATCAGACCTTC
>36.37|1978229|37|NC_009767|PILER-CR
TGTACTCAGTCGTTGCGCGAGAGTCTGCACGTGCTCA
>36.38|1978302|38|NC_009767|PILER-CR
TCGGTGCTCGACGCATGGACGGCGTCGCTGCGTGCATC
>36.39|1978376|37|NC_009767|PILER-CR
TGCTGCGGACGCAAGTTCCGTCTGCGTCGCTGATGCA
>36.40|1978449|37|NC_009767|PILER-CR
TTCAGTTTCGCTTGAGACGCTGCGACCTGAGCAGTGG
>36.41|1978522|37|NC_009767|PILER-CR
TATGAGGAGCGGTGTCATGGGTGTCATGGAGGATGAC
>36.42|1978595|38|NC_009767|PILER-CR
TCTGGCGGAGGCGATGGACGCCGCGCTGTCCATCGCCG
>36.43|1978669|36|NC_009767|PILER-CR
TCCGCGACGGGGGTGGTGTATTTGCGTGGCGGATGG
>36.44|1978741|40|NC_009767|PILER-CR
TTGGACCGCCGAATCCGCGACGGTGCCGGAAGCGACCGCG
>36.45|1978817|36|NC_009767|PILER-CR
TCCGGTGTGGCTCAACCACACCTTGCCGATTAGGAG
>36.46|1978889|37|NC_009767|PILER-CR
TCGCCGTCCGCTGGCGTCCGGTCGGCGCGGTCGCCAA
>36.47|1978962|37|NC_009767|PILER-CR
TTGCCGCAACGCTTCAAACATGCGCGGTTCCGACGCG
>36.48|1979035|36|NC_009767|PILER-CR
TACGCAAGACAATCAGGTCGCATTTCTCACATTGCT
>36.49|1979107|38|NC_009767|PILER-CR
TTCAATCGAGCGCATTGTCGTCGCCAGCGTGCGGTCGA
>36.50|1979181|37|NC_009767|PILER-CR
TTCGCCGCCGCGCGCCTGAACCGTCACGCGCCGTTGC
>36.51|1979254|38|NC_009767|PILER-CR
TCAACGCGCCCGCGACGGCCGCAGCAGGCTTTCGCGGA
>36.52|1979328|38|NC_009767|PILER-CR
TCCAGCAGCGCCAGCGGCGGGATCACGGGTAGAACGAA
>36.53|1979402|37|NC_009767|PILER-CR
TTGGAGAAGATGCCGCCGCCCGCCGTTGAACGCCTGA
>36.54|1979475|37|NC_009767|PILER-CR
TCGTAACGCAGAAGGCGGGAGCAGCGGTGCGGGCGCT
>36.55|1979548|39|NC_009767|PILER-CR
TCTGGAGAACGGAACGACGATCCTGGTTGCAGGCGTCAC
>36.56|1979623|36|NC_009767|PILER-CR
TGCCGCGCCTCGCACCAAAAGCGCCAGCGCCTCGTG
>36.57|1979695|37|NC_009767|PILER-CR
TGGCGCGCGCGAGGATGGACCCCATGCCGAAATCAAA
>36.58|1979768|37|NC_009767|PILER-CR
TTTGATGGCGTGAAGCGACGGGCTGTTGATTTTGATG
>36.59|1979841|37|NC_009767|PILER-CR
TTGATTATATGGGTCTTCTGGTTCTTCGAGAAACAAT
>36.60|1979914|37|NC_009767|PILER-CR
TCCGAGAGGAGAGATGAGGAGCATCCTCAAGGAAAGA
>36.61|1979987|36|NC_009767|PILER-CR
TCGTACTGGATATTGACAACGGTTCGGTTCCGGTCT
>36.62|1980059|37|NC_009767|PILER-CR
TCTCGTATTGTCGATGCGTTTCGGCGGTGACATATGG
>36.63|1980132|37|NC_009767|PILER-CR
TCCGGTGCTGCGATTCTCGGCGGCGCTGGGTGAGTCG
>36.64|1980205|36|NC_009767|PILER-CR
TCCGGAAGCATAGACAGCGCGCGTCCACAGCAACCG
>36.65|1980277|38|NC_009767|PILER-CR
TGTTATTGCAGGGAAAATATGGTTTTACAGATGGCTAT
>36.66|1980351|38|NC_009767|PILER-CR
TCGGAGACGAATATGACGAGGAGGCGGACAGGTATTAC
>36.67|1980425|37|NC_009767|PILER-CR
TCGAGCGCGGCTCTGCGTGGTTTTTAAGCACTCCGCG
>36.68|1980498|37|NC_009767|PILER-CR
TTGAAGTACGTCGCTGGACGGCGTACTTCCAGCCGAC
>36.69|1980571|37|NC_009767|PILER-CR
TACTACTGGCTGCTCGCGCGCGATCCCCCCGCGCGCA
>36.70|1980644|37|NC_009767|PILER-CR
TCGTACTGGAACGGCGAGTGCGATGACGCGATTGCGT
>36.71|1980717|37|NC_009767|PILER-CR
TTGCGTGGCTTTGGGAGCCGAACGCGCGCTCCGAAAT
>36.72|1980790|39|NC_009767|PILER-CR
TTGTTGCGCCAGAGCGAGCGCGGCGGCGACGGCGCGGAG
>36.73|1980865|36|NC_009767|PILER-CR
TGGCATGTCGGTGCTGTGCGAGTTCAATGCCATCCT
>36.74|1980937|37|NC_009767|PILER-CR
TATACCTGTCTTCAATAGCCGAAGAACCCAACTCCAA
>36.75|1981010|38|NC_009767|PILER-CR
TTGCCAGGTTTGTACAAGGCGCAAAAAGAGTTGGCGGC
>36.76|1981084|37|NC_009767|PILER-CR
TTGGAGCGGGCGATGCAGGATCCGCGATTTCCGACAG
>36.77|1981157|37|NC_009767|PILER-CR
TGCCGATTGGAAGCGGCGCGCTCGATGTGGATGAGCG
>36.78|1981230|37|NC_009767|PILER-CR
TTCAGTGCTTCGCATACGCGCTGATCGTCGGGTGAAT
>36.79|1981303|37|NC_009767|PILER-CR
TCTACCCGGGCCGCTTCCAGATCGACGTTTCGATTGA
>36.80|1981376|37|NC_009767|PILER-CR
TATAGCTGACTGCGCGTCTGTAGTCGGGGCTGTCTTT
>36.81|1981449|38|NC_009767|PILER-CR
TTCGTCGGCATTGTCGGCGCTGTGCGGTCTGCGTGGGA
>36.82|1981523|36|NC_009767|PILER-CR
TAGTCGAAGCCTAGGGGGCTAGATTGGAGAACGCGA
>36.83|1981595|37|NC_009767|PILER-CR
TCGCGGCCGTTGCTCGCGATCTTCTGGCGCTTGACGG
>36.84|1981668|37|NC_009767|PILER-CR
TCCGAGTACGAGGTCGACTACGAGACCTCGTTTCAGG
>36.85|1981741|36|NC_009767|PILER-CR
TTCGGGCGCGCCATCGCCGCCGCGCGCGAGGCGCGG
>36.86|1981813|37|NC_009767|PILER-CR
TCGCCTCAACCACGCCGCGCCGGTTAAACAATCGCCA
>36.87|1981886|37|NC_009767|PILER-CR
TCTACGTTGGTTGTCGTCGATGCCGACACCGATGACG
>36.88|1981959|38|NC_009767|PILER-CR
TCCGTCTGGACCGGGCGCGTCGAAAACGTCGAAAGCGA
>36.89|1982033|39|NC_009767|PILER-CR
TTATGGACGGCGATCAATCGATCGCCGTCCTCGTGAAAA
>36.90|1982108|37|NC_009767|PILER-CR
TTGCGCCCGCGAGCGCGCCGCCCGTGACTTTGTTGAT
>36.91|1982181|37|NC_009767|PILER-CR
TCGATCACATTGGGCGCGCCGAGCGCGGCCAGCGTCG
>36.92|1982254|38|NC_009767|PILER-CR
TTTGGCGTGGGACGAGGACGAGCCGACTTTGGAGATTT
>36.93|1982328|35|NC_009767|PILER-CR
TTTATCGTGCGCGCGACGGCGCACGGAAAGCGCGT
>36.94|1982399|36|NC_009767|PILER-CR
TGACAGACGAGGTGCGTATCCCGCAGAGGCATTACG
>36.95|1982471|39|NC_009767|PILER-CR
TAAAGAATGAGTTTGGCGGAGTCATTGCGGGCGGTCCGA
>36.96|1982546|39|NC_009767|PILER-CR
TGGAGATGGCGATGAACTAACGTAAAAGATATCGTTAAC
>36.97|1982621|37|NC_009767|PILER-CR
TGTTGCGGCGCTTCGAGCACTGGCTGCGCTCACTGGT
>36.98|1982694|38|NC_009767|PILER-CR
TCAACCGGGGCTATCCGCGTTTCATTTTCGTGGCAAAA
>36.99|1982768|38|NC_009767|PILER-CR
TCCACGCGCTTGTGTAGCTCTCTGAACCCGAACCATCC
>36.100|1982842|33|NC_009767|PILER-CR
TATTGCCCGGAGGGGCGCGCCTTGCGTATCAGG
>36.101|1982911|38|NC_009767|PILER-CR
TCAACCGACCCCGGAGCGGGTAGCAGCGTTTGGCGTTG
>36.102|1982985|36|NC_009767|PILER-CR
TTCCTTGGGCGTGCGCCTCTTCGTCTTCGTCAGGGC
>36.103|1983057|36|NC_009767|PILER-CR
TTTCGATTTTTGTCCATTTTGTGCGATTTTTGTGTA
>36.104|1983129|38|NC_009767|PILER-CR
TGGACTTTGACGATGACGGGACGCAGCATGTATTCGAC
>36.105|1983203|37|NC_009767|PILER-CR
TGCCCTCGCGCCGCCCGGCAGCCGGATCGCCCCGACC
>36.106|1983276|36|NC_009767|PILER-CR
TCGTTTCCGTCGTTTTTTGTGCGATGATGATGATGC
>36.107|1983348|38|NC_009767|PILER-CR
TCTATTTTGAGGCGCGCACAGGGATGCAATACGAAGAA
>36.108|1983422|41|NC_009767|PILER-CR
TAGGCGGGACGGTTGGATGACCTGATAGGTGAGGTGCTGTA
>36.109|1983499|37|NC_009767|PILER-CR
TGTACTTGCGTGTGCCGGTGACAATCGTGATTGTCCT
>36.110|1983572|36|NC_009767|PILER-CR
TTTTAACGCCAGCATCGCCAGGCTCTCGAACTCGTC
>36.111|1983644|36|NC_009767|PILER-CR
TTGAAAGGAAGGAAACAATGGCGAACGGCGAACAGA
>36.112|1983716|40|NC_009767|PILER-CR
TCGAGGGCGGGCGCGTCATCGGCGCGAATGCGCTCGCCCT
>36.113|1983792|36|NC_009767|PILER-CR
TCCGCCGCCGGATCGCCCCGCCCAGGGGTAATCAGG
>36.114|1983864|36|NC_009767|PILER-CR
TCGAAACGCAGGCTTGACCTCGCCTACAACGCCGAA
>36.115|1983936|37|NC_009767|PILER-CR
TGTGCGTCGATTGACTAGGCGTTGCTACGTCGCGTCT
>36.116|1984009|37|NC_009767|PILER-CR
TCTTATGCTGAAAACAGCACAGAAAGGGGGGATTGAA
>36.117|1984082|40|NC_009767|PILER-CR
TTTGGTCGCCCGCCACGCTGAACAACCGCAAGTTCAACCG
>36.118|1984158|37|NC_009767|PILER-CR
TGGCGCTCGGTACGGGATGGGAACTGGTGATGGCGAA
>36.119|1984231|37|NC_009767|PILER-CR
TGGTCCATCGAGCCGGGACCTGTTACATCGAAATCAT
>36.120|1984304|38|NC_009767|PILER-CR
TTTCGCCATACAGACACCCCGAGCTGGTCTTGACCGAT
>36.121|1984378|36|NC_009767|PILER-CR
TGCACCAGCGCGCTGGAAAGAGTCGCGCGGGGATCG
>36.122|1984450|39|NC_009767|PILER-CR
TATGATGTCAGAGCGCTGCTCCCAGGGCTCCGGAGGCTC
>36.123|1984525|38|NC_009767|PILER-CR
TTCGGATTGCGGCGCTGCCGGATGAAATACAGCTCGAC
>36.124|1984599|37|NC_009767|PILER-CR
TCGGATAGTCGCGGGGTTAGCCTTGATGCACTAGTGG
>36.125|1984672|37|NC_009767|PILER-CR
TAGATATGCGCGCAAGCGTCACGAGACGACGCAAGCG
>36.126|1984745|37|NC_009767|PILER-CR
TATTGCGGTCAAACGCGCTATCGGACGCGGCTAGTTT
>36.127|1984818|38|NC_009767|PILER-CR
TTCGGTCGCAATCATCAATAGACGCACACGCGCAAAAA
>36.128|1975592|36|NC_009767|CRISPRCasFinder,CRT
GCCACGGGCTGCACGACGGCCTCCAGCGCACGCTGG
>36.129|1975665|35|NC_009767|CRISPRCasFinder,CRT
CGGCAGCGCCGCCGGCAGCACGACTAGCCCGCCGT
>36.130|1975737|35|NC_009767|CRISPRCasFinder,CRT
CGGCTGCTGCATGCTGGACTACGCGCGCGTTCGAT
>36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT
GCCATCTACGCCGTGCGCGGGATGTGTGCGTGGA
>36.132|1975880|38|NC_009767|CRISPRCasFinder,CRT
TTCGTCGCCGAGCGAGCGACGCCGTTTTCCGTGACGAG
>36.133|1975955|36|NC_009767|CRISPRCasFinder,CRT
CGACTTCAGGTATTGCCGACCTTTATCTTCTCCTAT
>36.134|1976028|39|NC_009767|CRISPRCasFinder,CRT
TTTGATGCGCACTGTTGAGCGCATTGAATACGTTCTTTA
>36.135|1976104|38|NC_009767|CRISPRCasFinder,CRT
ATGCGGCGTATGAGCGTCGCCGCCCCCGCCGCGAATAG
>36.136|1976179|36|NC_009767|CRISPRCasFinder,CRT
CCAGTTTGACGCCGACGCCCGCCGAACCTCGCACGA
>36.137|1976252|40|NC_009767|CRISPRCasFinder,CRT
TGCGCGCAAAGAGCACGACTTCATTCGAGGGACCGGCGTC
>36.138|1976329|37|NC_009767|CRISPRCasFinder,CRT
GCCAATCAAGAATGGCGCGACGGTCATTCACGTCGAA
>36.139|1976403|35|NC_009767|CRISPRCasFinder,CRT
GATTTGCCGAATACGCTCACGCGTAAGACCAATGA
>36.140|1976475|34|NC_009767|CRISPRCasFinder,CRT
CGACTGGCGCAATTACATCTTCGCCAATCGTCGC
>36.141|1976546|37|NC_009767|CRISPRCasFinder,CRT
GTAAACCTTTTTGTGCGCTTGTATCTCCATACCGTAG
>36.142|1976620|38|NC_009767|CRISPRCasFinder,CRT
TACCCCCGCACCCAGCAACCCCGTGCTGATTGAGTTTC
>36.143|1976695|37|NC_009767|CRISPRCasFinder,CRT
CATACATCGGGCGACAGCCCATCTCCGACTTGTCCAC
>36.144|1976769|35|NC_009767|CRISPRCasFinder,CRT
CGTTTGCGTCTGCGCCATTTGAAACGCCATCACGA
>36.145|1976841|36|NC_009767|CRISPRCasFinder,CRT
TCCATGCCGATGAACCGCCCTTGCGCGTCAAAGAAG
>36.146|1976914|36|NC_009767|CRISPRCasFinder,CRT
TTATACCCACGATGAATGCGTCCATATCGGTGGAAT
>36.147|1976987|37|NC_009767|CRISPRCasFinder,CRT
CTTGCGTCTGGATTGCCTGCAACCGCGACAGATGCGA
>36.148|1977061|35|NC_009767|CRISPRCasFinder,CRT
ACCCTGGTACTATTCTGAACTAGTACCATTGCCTG
>36.149|1977133|36|NC_009767|CRISPRCasFinder,CRT
TTTCGCGAGAGAGAGCACGCCAGTGACCGAAAAAGA
>36.150|1977206|36|NC_009767|CRISPRCasFinder,CRT
CGATCCGGCAAGATCGCATTCACATCACGAATATCG
>36.151|1977279|36|NC_009767|CRISPRCasFinder,CRT
CAGGTTACCCTGGTCAGCTTCCAGACAGGATTTATC
>36.152|1977352|37|NC_009767|CRISPRCasFinder,CRT
AGACATGGACGATTCGTCGCCGCGCAATGTTGCTTGC
>36.153|1977426|35|NC_009767|CRISPRCasFinder,CRT
CCTGATACCGCGGATCCATCATCGTCCCGGTCTTA
>36.154|1977498|35|NC_009767|CRISPRCasFinder,CRT
TCAGGACGGCAGCCGCCGTCGACCGAAAACCCCAG
>36.155|1977570|37|NC_009767|CRISPRCasFinder,CRT
CCGTGCATCGTGGCGTTGGCAAACTCTGCGTTTGGCA
>36.156|1977644|36|NC_009767|CRISPRCasFinder,CRT
GTAGGGATTGGTATATTCAGACCGATTCAGCGCCAG
>36.157|1977717|38|NC_009767|CRISPRCasFinder,CRT
TCGTTCCGTGAGCGGAAGTATCGTTATCAGTTGCACAG
>36.158|1977792|36|NC_009767|CRISPRCasFinder,CRT
CATCCGACCATCGCCCGGCGCCTTTGCGCAAACGCC
>36.159|1977865|36|NC_009767|CRISPRCasFinder,CRT
CGGGGAACTCCAATGAGAGGGGAACCAATTGAAGAC
>36.160|1977938|36|NC_009767|CRISPRCasFinder,CRT
GGACGACGACGACGGCGGGCACCCAGGGACGCCGAA
>36.161|1978011|36|NC_009767|CRISPRCasFinder,CRT
GAGACGCCGAACTCGGACGTCAACCGTGTGGAACGC
>36.162|1978084|35|NC_009767|CRISPRCasFinder,CRT
GCGCTCCGGGAGGTATGGGCGTGGTCAACTGGTCA
>36.163|1978156|37|NC_009767|CRISPRCasFinder,CRT
CTGGACGCGCGCCGGTGAGACCTGCCATCAGACCTTC
>36.164|1978230|36|NC_009767|CRISPRCasFinder,CRT
GTACTCAGTCGTTGCGCGAGAGTCTGCACGTGCTCA
>36.165|1978303|37|NC_009767|CRISPRCasFinder,CRT
CGGTGCTCGACGCATGGACGGCGTCGCTGCGTGCATC
>36.166|1978377|36|NC_009767|CRISPRCasFinder,CRT
GCTGCGGACGCAAGTTCCGTCTGCGTCGCTGATGCA
>36.167|1978450|36|NC_009767|CRISPRCasFinder,CRT
TCAGTTTCGCTTGAGACGCTGCGACCTGAGCAGTGG
>36.168|1978523|36|NC_009767|CRISPRCasFinder,CRT
ATGAGGAGCGGTGTCATGGGTGTCATGGAGGATGAC
>36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT
CTGGCGGAGGCGATGGACGCCGCGCTGTCCATCGCCG
>36.170|1978670|35|NC_009767|CRISPRCasFinder,CRT
CCGCGACGGGGGTGGTGTATTTGCGTGGCGGATGG
>36.171|1978742|39|NC_009767|CRISPRCasFinder,CRT
TGGACCGCCGAATCCGCGACGGTGCCGGAAGCGACCGCG
>36.172|1978818|35|NC_009767|CRISPRCasFinder,CRT
CCGGTGTGGCTCAACCACACCTTGCCGATTAGGAG
>36.173|1978890|36|NC_009767|CRISPRCasFinder,CRT
CGCCGTCCGCTGGCGTCCGGTCGGCGCGGTCGCCAA
>36.174|1978963|36|NC_009767|CRISPRCasFinder,CRT
TGCCGCAACGCTTCAAACATGCGCGGTTCCGACGCG
>36.175|1979036|35|NC_009767|CRISPRCasFinder,CRT
ACGCAAGACAATCAGGTCGCATTTCTCACATTGCT
>36.176|1979108|37|NC_009767|CRISPRCasFinder,CRT
TCAATCGAGCGCATTGTCGTCGCCAGCGTGCGGTCGA
>36.177|1979182|36|NC_009767|CRISPRCasFinder,CRT
TCGCCGCCGCGCGCCTGAACCGTCACGCGCCGTTGC
>36.178|1979255|37|NC_009767|CRISPRCasFinder,CRT
CAACGCGCCCGCGACGGCCGCAGCAGGCTTTCGCGGA
>36.179|1979329|37|NC_009767|CRISPRCasFinder,CRT
CCAGCAGCGCCAGCGGCGGGATCACGGGTAGAACGAA
>36.180|1979403|36|NC_009767|CRISPRCasFinder,CRT
TGGAGAAGATGCCGCCGCCCGCCGTTGAACGCCTGA
>36.181|1979476|36|NC_009767|CRISPRCasFinder,CRT
CGTAACGCAGAAGGCGGGAGCAGCGGTGCGGGCGCT
>36.182|1979549|38|NC_009767|CRISPRCasFinder,CRT
CTGGAGAACGGAACGACGATCCTGGTTGCAGGCGTCAC
>36.183|1979624|35|NC_009767|CRISPRCasFinder,CRT
GCCGCGCCTCGCACCAAAAGCGCCAGCGCCTCGTG
>36.184|1979696|36|NC_009767|CRISPRCasFinder,CRT
GGCGCGCGCGAGGATGGACCCCATGCCGAAATCAAA
>36.185|1979769|36|NC_009767|CRISPRCasFinder,CRT
TTGATGGCGTGAAGCGACGGGCTGTTGATTTTGATG
>36.186|1979842|36|NC_009767|CRISPRCasFinder,CRT
TGATTATATGGGTCTTCTGGTTCTTCGAGAAACAAT
>36.187|1979915|36|NC_009767|CRISPRCasFinder,CRT
CCGAGAGGAGAGATGAGGAGCATCCTCAAGGAAAGA
>36.188|1979988|35|NC_009767|CRISPRCasFinder,CRT
CGTACTGGATATTGACAACGGTTCGGTTCCGGTCT
>36.189|1980060|36|NC_009767|CRISPRCasFinder,CRT
CTCGTATTGTCGATGCGTTTCGGCGGTGACATATGG
>36.190|1980133|36|NC_009767|CRISPRCasFinder,CRT
CCGGTGCTGCGATTCTCGGCGGCGCTGGGTGAGTCG
>36.191|1980206|35|NC_009767|CRISPRCasFinder,CRT
CCGGAAGCATAGACAGCGCGCGTCCACAGCAACCG
>36.192|1980278|37|NC_009767|CRISPRCasFinder,CRT
GTTATTGCAGGGAAAATATGGTTTTACAGATGGCTAT
>36.193|1980352|37|NC_009767|CRISPRCasFinder,CRT
CGGAGACGAATATGACGAGGAGGCGGACAGGTATTAC
>36.194|1980426|36|NC_009767|CRISPRCasFinder,CRT
CGAGCGCGGCTCTGCGTGGTTTTTAAGCACTCCGCG
>36.195|1980499|36|NC_009767|CRISPRCasFinder,CRT
TGAAGTACGTCGCTGGACGGCGTACTTCCAGCCGAC
>36.196|1980572|36|NC_009767|CRISPRCasFinder,CRT
ACTACTGGCTGCTCGCGCGCGATCCCCCCGCGCGCA
>36.197|1980645|36|NC_009767|CRISPRCasFinder,CRT
CGTACTGGAACGGCGAGTGCGATGACGCGATTGCGT
>36.198|1980718|36|NC_009767|CRISPRCasFinder,CRT
TGCGTGGCTTTGGGAGCCGAACGCGCGCTCCGAAAT
>36.199|1980791|38|NC_009767|CRISPRCasFinder,CRT
TGTTGCGCCAGAGCGAGCGCGGCGGCGACGGCGCGGAG
>36.200|1980866|35|NC_009767|CRISPRCasFinder,CRT
GGCATGTCGGTGCTGTGCGAGTTCAATGCCATCCT
>36.201|1980938|36|NC_009767|CRISPRCasFinder,CRT
ATACCTGTCTTCAATAGCCGAAGAACCCAACTCCAA
>36.202|1981011|37|NC_009767|CRISPRCasFinder,CRT
TGCCAGGTTTGTACAAGGCGCAAAAAGAGTTGGCGGC
>36.203|1981085|36|NC_009767|CRISPRCasFinder,CRT
TGGAGCGGGCGATGCAGGATCCGCGATTTCCGACAG
>36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT
GCCGATTGGAAGCGGCGCGCTCGATGTGGATGAGCG
>36.205|1981231|36|NC_009767|CRISPRCasFinder,CRT
TCAGTGCTTCGCATACGCGCTGATCGTCGGGTGAAT
>36.206|1981304|36|NC_009767|CRISPRCasFinder,CRT
CTACCCGGGCCGCTTCCAGATCGACGTTTCGATTGA
>36.207|1981377|36|NC_009767|CRISPRCasFinder,CRT
ATAGCTGACTGCGCGTCTGTAGTCGGGGCTGTCTTT
>36.208|1981450|37|NC_009767|CRISPRCasFinder,CRT
TCGTCGGCATTGTCGGCGCTGTGCGGTCTGCGTGGGA
>36.209|1981524|35|NC_009767|CRISPRCasFinder,CRT
AGTCGAAGCCTAGGGGGCTAGATTGGAGAACGCGA
>36.210|1981596|36|NC_009767|CRISPRCasFinder,CRT
CGCGGCCGTTGCTCGCGATCTTCTGGCGCTTGACGG
>36.211|1981669|36|NC_009767|CRISPRCasFinder,CRT
CCGAGTACGAGGTCGACTACGAGACCTCGTTTCAGG
>36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT
TCGGGCGCGCCATCGCCGCCGCGCGCGAGGCGCGG
>36.213|1981814|36|NC_009767|CRISPRCasFinder,CRT
CGCCTCAACCACGCCGCGCCGGTTAAACAATCGCCA
>36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT
CTACGTTGGTTGTCGTCGATGCCGACACCGATGACG
>36.215|1981960|37|NC_009767|CRISPRCasFinder,CRT
CCGTCTGGACCGGGCGCGTCGAAAACGTCGAAAGCGA
>36.216|1982034|38|NC_009767|CRISPRCasFinder,CRT
TATGGACGGCGATCAATCGATCGCCGTCCTCGTGAAAA
>36.217|1982109|36|NC_009767|CRISPRCasFinder,CRT
TGCGCCCGCGAGCGCGCCGCCCGTGACTTTGTTGAT
>36.218|1982182|36|NC_009767|CRISPRCasFinder,CRT
CGATCACATTGGGCGCGCCGAGCGCGGCCAGCGTCG
>36.219|1982255|37|NC_009767|CRISPRCasFinder,CRT
TTGGCGTGGGACGAGGACGAGCCGACTTTGGAGATTT
>36.220|1982329|34|NC_009767|CRISPRCasFinder,CRT
TTATCGTGCGCGCGACGGCGCACGGAAAGCGCGT
>36.221|1982400|35|NC_009767|CRISPRCasFinder,CRT
GACAGACGAGGTGCGTATCCCGCAGAGGCATTACG
>36.222|1982472|38|NC_009767|CRISPRCasFinder,CRT
AAAGAATGAGTTTGGCGGAGTCATTGCGGGCGGTCCGA
>36.223|1982547|38|NC_009767|CRISPRCasFinder,CRT
GGAGATGGCGATGAACTAACGTAAAAGATATCGTTAAC
>36.224|1982622|36|NC_009767|CRISPRCasFinder,CRT
GTTGCGGCGCTTCGAGCACTGGCTGCGCTCACTGGT
>36.225|1982695|37|NC_009767|CRISPRCasFinder,CRT
CAACCGGGGCTATCCGCGTTTCATTTTCGTGGCAAAA
>36.226|1982769|37|NC_009767|CRISPRCasFinder,CRT
CCACGCGCTTGTGTAGCTCTCTGAACCCGAACCATCC
>36.227|1982843|32|NC_009767|CRISPRCasFinder,CRT
ATTGCCCGGAGGGGCGCGCCTTGCGTATCAGG
>36.228|1982912|37|NC_009767|CRISPRCasFinder,CRT
CAACCGACCCCGGAGCGGGTAGCAGCGTTTGGCGTTG
>36.229|1982986|35|NC_009767|CRISPRCasFinder,CRT
TCCTTGGGCGTGCGCCTCTTCGTCTTCGTCAGGGC
>36.230|1983058|35|NC_009767|CRISPRCasFinder,CRT
TTCGATTTTTGTCCATTTTGTGCGATTTTTGTGTA
>36.231|1983130|37|NC_009767|CRISPRCasFinder,CRT
GGACTTTGACGATGACGGGACGCAGCATGTATTCGAC
>36.232|1983204|36|NC_009767|CRISPRCasFinder,CRT
GCCCTCGCGCCGCCCGGCAGCCGGATCGCCCCGACC
>36.233|1983277|35|NC_009767|CRISPRCasFinder,CRT
CGTTTCCGTCGTTTTTTGTGCGATGATGATGATGC
>36.234|1983349|37|NC_009767|CRISPRCasFinder,CRT
CTATTTTGAGGCGCGCACAGGGATGCAATACGAAGAA
>36.235|1983423|40|NC_009767|CRISPRCasFinder,CRT
AGGCGGGACGGTTGGATGACCTGATAGGTGAGGTGCTGTA
>36.236|1983500|36|NC_009767|CRISPRCasFinder,CRT
GTACTTGCGTGTGCCGGTGACAATCGTGATTGTCCT
>36.237|1983573|35|NC_009767|CRISPRCasFinder,CRT
TTTAACGCCAGCATCGCCAGGCTCTCGAACTCGTC
>36.238|1983645|35|NC_009767|CRISPRCasFinder,CRT
TGAAAGGAAGGAAACAATGGCGAACGGCGAACAGA
>36.239|1983717|39|NC_009767|CRISPRCasFinder,CRT
CGAGGGCGGGCGCGTCATCGGCGCGAATGCGCTCGCCCT
>36.240|1983793|35|NC_009767|CRISPRCasFinder,CRT
CCGCCGCCGGATCGCCCCGCCCAGGGGTAATCAGG
>36.241|1983865|35|NC_009767|CRISPRCasFinder,CRT
CGAAACGCAGGCTTGACCTCGCCTACAACGCCGAA
>36.242|1983937|36|NC_009767|CRISPRCasFinder,CRT
GTGCGTCGATTGACTAGGCGTTGCTACGTCGCGTCT
>36.243|1984010|36|NC_009767|CRISPRCasFinder,CRT
CTTATGCTGAAAACAGCACAGAAAGGGGGGATTGAA
>36.244|1984083|39|NC_009767|CRISPRCasFinder,CRT
TTGGTCGCCCGCCACGCTGAACAACCGCAAGTTCAACCG
>36.245|1984159|36|NC_009767|CRISPRCasFinder,CRT
GGCGCTCGGTACGGGATGGGAACTGGTGATGGCGAA
>36.246|1984232|36|NC_009767|CRISPRCasFinder,CRT
GGTCCATCGAGCCGGGACCTGTTACATCGAAATCAT
>36.247|1984305|37|NC_009767|CRISPRCasFinder,CRT
TTCGCCATACAGACACCCCGAGCTGGTCTTGACCGAT
>36.248|1984379|35|NC_009767|CRISPRCasFinder,CRT
GCACCAGCGCGCTGGAAAGAGTCGCGCGGGGATCG
>36.249|1984451|38|NC_009767|CRISPRCasFinder,CRT
ATGATGTCAGAGCGCTGCTCCCAGGGCTCCGGAGGCTC
>36.250|1984526|37|NC_009767|CRISPRCasFinder,CRT
TCGGATTGCGGCGCTGCCGGATGAAATACAGCTCGAC
>36.251|1984600|36|NC_009767|CRISPRCasFinder,CRT
CGGATAGTCGCGGGGTTAGCCTTGATGCACTAGTGG
>36.252|1984673|36|NC_009767|CRISPRCasFinder,CRT
AGATATGCGCGCAAGCGTCACGAGACGACGCAAGCG
>36.253|1984746|36|NC_009767|CRISPRCasFinder,CRT
ATTGCGGTCAAACGCGCTATCGGACGCGGCTAGTTT
>36.254|1984819|37|NC_009767|CRISPRCasFinder,CRT
TCGGTCGCAATCATCAATAGACGCACACGCGCAAAAA

CRISPR arrays and Neighbor proteins around NC_009767_36

CRISPR arrays

The CRISPR arrays of NC_009767_36

>merge|NC_009767|36|1975555-1984892|PILER-CR,CRISPRCasFinder,CRT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGCCACGGGCTGCACGACGGCCTCCAGCGCACGCTGGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAACGCGGCAGCGCCGCCGGCAGCACGACTAGCCCGCCGTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAACCCGGCTGCTGCATGCTGGACTACGCGCGCGTTCGATGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAATCGCCATCTACGCCGTGCGCGGGATGTGTGCGTGGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTCGTCGCCGAGCGAGCGACGCCGTTTTCCGTGACGAGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGACTTCAGGTATTGCCGACCTTTATCTTCTCCTATGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTTGATGCGCACTGTTGAGCGCATTGAATACGTTCTTTAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATATGCGGCGTATGAGCGTCGCCGCCCCCGCCGCGAATAGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCAGTTTGACGCCGACGCCCGCCGAACCTCGCACGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGCGCGCAAAGAGCACGACTTCATTCGAGGGACCGGCGTCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGCCAATCAAGAATGGCGCGACGGTCATTCACGTCGAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGATTTGCCGAATACGCTCACGCGTAAGACCAATGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGACTGGCGCAATTACATCTTCGCCAATCGTCGCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGTAAACCTTTTTGTGCGCTTGTATCTCCATACCGTAGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTACCCCCGCACCCAGCAACCCCGTGCTGATTGAGTTTCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCATACATCGGGCGACAGCCCATCTCCGACTTGTCCACGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGTTTGCGTCTGCGCCATTTGAAACGCCATCACGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCCATGCCGATGAACCGCCCTTGCGCGTCAAAGAAGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTATACCCACGATGAATGCGTCCATATCGGTGGAATGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCTTGCGTCTGGATTGCCTGCAACCGCGACAGATGCGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATACCCTGGTACTATTCTGAACTAGTACCATTGCCTGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTTCGCGAGAGAGAGCACGCCAGTGACCGAAAAAGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGATCCGGCAAGATCGCATTCACATCACGAATATCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCAGGTTACCCTGGTCAGCTTCCAGACAGGATTTATCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATAGACATGGACGATTCGTCGCCGCGCAATGTTGCTTGCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCTGATACCGCGGATCCATCATCGTCCCGGTCTTAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCAGGACGGCAGCCGCCGTCGACCGAAAACCCCAGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCGTGCATCGTGGCGTTGGCAAACTCTGCGTTTGGCAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGTAGGGATTGGTATATTCAGACCGATTCAGCGCCAGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCGTTCCGTGAGCGGAAGTATCGTTATCAGTTGCACAGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAACATCCGACCATCGCCCGGCGCCTTTGCGCAAACGCCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAACGGGGAACTCCAATGAGAGGGGAACCAATTGAAGACGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAAGGACGACGACGACGGCGGGCACCCAGGGACGCCGAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGAGACGCCGAACTCGGACGTCAACCGTGTGGAACGCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGCGCTCCGGGAGGTATGGGCGTGGTCAACTGGTCAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCTGGACGCGCGCCGGTGAGACCTGCCATCAGACCTTCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGTACTCAGTCGTTGCGCGAGAGTCTGCACGTGCTCAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGGTGCTCGACGCATGGACGGCGTCGCTGCGTGCATCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGCTGCGGACGCAAGTTCCGTCTGCGTCGCTGATGCAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCAGTTTCGCTTGAGACGCTGCGACCTGAGCAGTGGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATATGAGGAGCGGTGTCATGGGTGTCATGGAGGATGACGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCTGGCGGAGGCGATGGACGCCGCGCTGTCCATCGCCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCGCGACGGGGGTGGTGTATTTGCGTGGCGGATGGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGGACCGCCGAATCCGCGACGGTGCCGGAAGCGACCGCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCGGTGTGGCTCAACCACACCTTGCCGATTAGGAGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGCCGTCCGCTGGCGTCCGGTCGGCGCGGTCGCCAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGCCGCAACGCTTCAAACATGCGCGGTTCCGACGCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATACGCAAGACAATCAGGTCGCATTTCTCACATTGCTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCAATCGAGCGCATTGTCGTCGCCAGCGTGCGGTCGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCGCCGCCGCGCGCCTGAACCGTCACGCGCCGTTGCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCAACGCGCCCGCGACGGCCGCAGCAGGCTTTCGCGGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCAGCAGCGCCAGCGGCGGGATCACGGGTAGAACGAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGGAGAAGATGCCGCCGCCCGCCGTTGAACGCCTGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGTAACGCAGAAGGCGGGAGCAGCGGTGCGGGCGCTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCTGGAGAACGGAACGACGATCCTGGTTGCAGGCGTCACGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGCCGCGCCTCGCACCAAAAGCGCCAGCGCCTCGTGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGGCGCGCGCGAGGATGGACCCCATGCCGAAATCAAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTGATGGCGTGAAGCGACGGGCTGTTGATTTTGATGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGATTATATGGGTCTTCTGGTTCTTCGAGAAACAATGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCGAGAGGAGAGATGAGGAGCATCCTCAAGGAAAGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGTACTGGATATTGACAACGGTTCGGTTCCGGTCTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCTCGTATTGTCGATGCGTTTCGGCGGTGACATATGGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCGGTGCTGCGATTCTCGGCGGCGCTGGGTGAGTCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCGGAAGCATAGACAGCGCGCGTCCACAGCAACCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGTTATTGCAGGGAAAATATGGTTTTACAGATGGCTATGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGGAGACGAATATGACGAGGAGGCGGACAGGTATTACGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGAGCGCGGCTCTGCGTGGTTTTTAAGCACTCCGCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGAAGTACGTCGCTGGACGGCGTACTTCCAGCCGACGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATACTACTGGCTGCTCGCGCGCGATCCCCCCGCGCGCAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGTACTGGAACGGCGAGTGCGATGACGCGATTGCGTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGCGTGGCTTTGGGAGCCGAACGCGCGCTCCGAAATGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGTTGCGCCAGAGCGAGCGCGGCGGCGACGGCGCGGAGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGGCATGTCGGTGCTGTGCGAGTTCAATGCCATCCTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATATACCTGTCTTCAATAGCCGAAGAACCCAACTCCAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGCCAGGTTTGTACAAGGCGCAAAAAGAGTTGGCGGCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGGAGCGGGCGATGCAGGATCCGCGATTTCCGACAGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGCCGATTGGAAGCGGCGCGCTCGATGTGGATGAGCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCAGTGCTTCGCATACGCGCTGATCGTCGGGTGAATGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCTACCCGGGCCGCTTCCAGATCGACGTTTCGATTGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATATAGCTGACTGCGCGTCTGTAGTCGGGGCTGTCTTTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCGTCGGCATTGTCGGCGCTGTGCGGTCTGCGTGGGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATAGTCGAAGCCTAGGGGGCTAGATTGGAGAACGCGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGCGGCCGTTGCTCGCGATCTTCTGGCGCTTGACGGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCGAGTACGAGGTCGACTACGAGACCTCGTTTCAGGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCGGGCGCGCCATCGCCGCCGCGCGCGAGGCGCGGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGCCTCAACCACGCCGCGCCGGTTAAACAATCGCCAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCTACGTTGGTTGTCGTCGATGCCGACACCGATGACGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCGTCTGGACCGGGCGCGTCGAAAACGTCGAAAGCGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTATGGACGGCGATCAATCGATCGCCGTCCTCGTGAAAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGCGCCCGCGAGCGCGCCGCCCGTGACTTTGTTGATGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGATCACATTGGGCGCGCCGAGCGCGGCCAGCGTCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTGGCGTGGGACGAGGACGAGCCGACTTTGGAGATTTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTATCGTGCGCGCGACGGCGCACGGAAAGCGCGTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGACAGACGAGGTGCGTATCCCGCAGAGGCATTACGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATAAAGAATGAGTTTGGCGGAGTCATTGCGGGCGGTCCGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGGAGATGGCGATGAACTAACGTAAAAGATATCGTTAACGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGTTGCGGCGCTTCGAGCACTGGCTGCGCTCACTGGTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCAACCGGGGCTATCCGCGTTTCATTTTCGTGGCAAAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCACGCGCTTGTGTAGCTCTCTGAACCCGAACCATCCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATATTGCCCGGAGGGGCGCGCCTTGCGTATCAGGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCAACCGACCCCGGAGCGGGTAGCAGCGTTTGGCGTTGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCCTTGGGCGTGCGCCTCTTCGTCTTCGTCAGGGCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTCGATTTTTGTCCATTTTGTGCGATTTTTGTGTAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGGACTTTGACGATGACGGGACGCAGCATGTATTCGACGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGCCCTCGCGCCGCCCGGCAGCCGGATCGCCCCGACCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGTTTCCGTCGTTTTTTGTGCGATGATGATGATGCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCTATTTTGAGGCGCGCACAGGGATGCAATACGAAGAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATAGGCGGGACGGTTGGATGACCTGATAGGTGAGGTGCTGTAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGTACTTGCGTGTGCCGGTGACAATCGTGATTGTCCTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTTAACGCCAGCATCGCCAGGCTCTCGAACTCGTCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTGAAAGGAAGGAAACAATGGCGAACGGCGAACAGAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGAGGGCGGGCGCGTCATCGGCGCGAATGCGCTCGCCCTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCCGCCGCCGGATCGCCCCGCCCAGGGGTAATCAGGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGAAACGCAGGCTTGACCTCGCCTACAACGCCGAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGTGCGTCGATTGACTAGGCGTTGCTACGTCGCGTCTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCTTATGCTGAAAACAGCACAGAAAGGGGGGATTGAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTGGTCGCCCGCCACGCTGAACAACCGCAAGTTCAACCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGGCGCTCGGTACGGGATGGGAACTGGTGATGGCGAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGGTCCATCGAGCCGGGACCTGTTACATCGAAATCATGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTTCGCCATACAGACACCCCGAGCTGGTCTTGACCGATGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATGCACCAGCGCGCTGGAAAGAGTCGCGCGGGGATCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATATGATGTCAGAGCGCTGCTCCCAGGGCTCCGGAGGCTCGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCGGATTGCGGCGCTGCCGGATGAAATACAGCTCGACGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATCGGATAGTCGCGGGGTTAGCCTTGATGCACTAGTGGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATAGATATGCGCGCAAGCGTCACGAGACGACGCAAGCGGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATATTGCGGTCAAACGCGCTATCGGACGCGGCTAGTTTGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAATTCGGTCGCAATCATCAATAGACGCACACGCGCAAAAAGTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT

>NC_009767|36|3|1975555-1984891|PILER-CR
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGCCACGGGCTGCACGACGGCCTCCAGCGCACGCTGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAC	GCGGCAGCGCCGCCGGCAGCACGACTAGCCCGCCGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAC	CCGGCTGCTGCATGCTGGACTACGCGCGCGTTCGAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAT	CGCCATCTACGCCGTGCGCGGGATGTGTGCGTGGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTCGTCGCCGAGCGAGCGACGCCGTTTTCCGTGACGAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGACTTCAGGTATTGCCGACCTTTATCTTCTCCTAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTTGATGCGCACTGTTGAGCGCATTGAATACGTTCTTTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TATGCGGCGTATGAGCGTCGCCGCCCCCGCCGCGAATAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCAGTTTGACGCCGACGCCCGCCGAACCTCGCACGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGCGCGCAAAGAGCACGACTTCATTCGAGGGACCGGCGTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGCCAATCAAGAATGGCGCGACGGTCATTCACGTCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGATTTGCCGAATACGCTCACGCGTAAGACCAATGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGACTGGCGCAATTACATCTTCGCCAATCGTCGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGTAAACCTTTTTGTGCGCTTGTATCTCCATACCGTAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTACCCCCGCACCCAGCAACCCCGTGCTGATTGAGTTTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCATACATCGGGCGACAGCCCATCTCCGACTTGTCCAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGTTTGCGTCTGCGCCATTTGAAACGCCATCACGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCCATGCCGATGAACCGCCCTTGCGCGTCAAAGAAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTATACCCACGATGAATGCGTCCATATCGGTGGAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCTTGCGTCTGGATTGCCTGCAACCGCGACAGATGCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TACCCTGGTACTATTCTGAACTAGTACCATTGCCTG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTTCGCGAGAGAGAGCACGCCAGTGACCGAAAAAGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGATCCGGCAAGATCGCATTCACATCACGAATATCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCAGGTTACCCTGGTCAGCTTCCAGACAGGATTTATC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TAGACATGGACGATTCGTCGCCGCGCAATGTTGCTTGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCTGATACCGCGGATCCATCATCGTCCCGGTCTTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCAGGACGGCAGCCGCCGTCGACCGAAAACCCCAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCGTGCATCGTGGCGTTGGCAAACTCTGCGTTTGGCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGTAGGGATTGGTATATTCAGACCGATTCAGCGCCAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCGTTCCGTGAGCGGAAGTATCGTTATCAGTTGCACAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	ACATCCGACCATCGCCCGGCGCCTTTGCGCAAACGCC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	ACGGGGAACTCCAATGAGAGGGGAACCAATTGAAGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	AGGACGACGACGACGGCGGGCACCCAGGGACGCCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGAGACGCCGAACTCGGACGTCAACCGTGTGGAACGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGCGCTCCGGGAGGTATGGGCGTGGTCAACTGGTCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCTGGACGCGCGCCGGTGAGACCTGCCATCAGACCTTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGTACTCAGTCGTTGCGCGAGAGTCTGCACGTGCTCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGGTGCTCGACGCATGGACGGCGTCGCTGCGTGCATC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGCTGCGGACGCAAGTTCCGTCTGCGTCGCTGATGCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCAGTTTCGCTTGAGACGCTGCGACCTGAGCAGTGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TATGAGGAGCGGTGTCATGGGTGTCATGGAGGATGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCTGGCGGAGGCGATGGACGCCGCGCTGTCCATCGCCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCGCGACGGGGGTGGTGTATTTGCGTGGCGGATGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGGACCGCCGAATCCGCGACGGTGCCGGAAGCGACCGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCGGTGTGGCTCAACCACACCTTGCCGATTAGGAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGCCGTCCGCTGGCGTCCGGTCGGCGCGGTCGCCAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGCCGCAACGCTTCAAACATGCGCGGTTCCGACGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TACGCAAGACAATCAGGTCGCATTTCTCACATTGCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCAATCGAGCGCATTGTCGTCGCCAGCGTGCGGTCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCGCCGCCGCGCGCCTGAACCGTCACGCGCCGTTGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCAACGCGCCCGCGACGGCCGCAGCAGGCTTTCGCGGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCAGCAGCGCCAGCGGCGGGATCACGGGTAGAACGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGGAGAAGATGCCGCCGCCCGCCGTTGAACGCCTGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGTAACGCAGAAGGCGGGAGCAGCGGTGCGGGCGCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCTGGAGAACGGAACGACGATCCTGGTTGCAGGCGTCAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGCCGCGCCTCGCACCAAAAGCGCCAGCGCCTCGTG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGGCGCGCGCGAGGATGGACCCCATGCCGAAATCAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTGATGGCGTGAAGCGACGGGCTGTTGATTTTGATG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGATTATATGGGTCTTCTGGTTCTTCGAGAAACAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCGAGAGGAGAGATGAGGAGCATCCTCAAGGAAAGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGTACTGGATATTGACAACGGTTCGGTTCCGGTCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCTCGTATTGTCGATGCGTTTCGGCGGTGACATATGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCGGTGCTGCGATTCTCGGCGGCGCTGGGTGAGTCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCGGAAGCATAGACAGCGCGCGTCCACAGCAACCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGTTATTGCAGGGAAAATATGGTTTTACAGATGGCTAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGGAGACGAATATGACGAGGAGGCGGACAGGTATTAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGAGCGCGGCTCTGCGTGGTTTTTAAGCACTCCGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGAAGTACGTCGCTGGACGGCGTACTTCCAGCCGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TACTACTGGCTGCTCGCGCGCGATCCCCCCGCGCGCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGTACTGGAACGGCGAGTGCGATGACGCGATTGCGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGCGTGGCTTTGGGAGCCGAACGCGCGCTCCGAAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGTTGCGCCAGAGCGAGCGCGGCGGCGACGGCGCGGAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGGCATGTCGGTGCTGTGCGAGTTCAATGCCATCCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TATACCTGTCTTCAATAGCCGAAGAACCCAACTCCAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGCCAGGTTTGTACAAGGCGCAAAAAGAGTTGGCGGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGGAGCGGGCGATGCAGGATCCGCGATTTCCGACAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGCCGATTGGAAGCGGCGCGCTCGATGTGGATGAGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCAGTGCTTCGCATACGCGCTGATCGTCGGGTGAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCTACCCGGGCCGCTTCCAGATCGACGTTTCGATTGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TATAGCTGACTGCGCGTCTGTAGTCGGGGCTGTCTTT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCGTCGGCATTGTCGGCGCTGTGCGGTCTGCGTGGGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TAGTCGAAGCCTAGGGGGCTAGATTGGAGAACGCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGCGGCCGTTGCTCGCGATCTTCTGGCGCTTGACGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCGAGTACGAGGTCGACTACGAGACCTCGTTTCAGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCGGGCGCGCCATCGCCGCCGCGCGCGAGGCGCGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGCCTCAACCACGCCGCGCCGGTTAAACAATCGCCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCTACGTTGGTTGTCGTCGATGCCGACACCGATGACG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCGTCTGGACCGGGCGCGTCGAAAACGTCGAAAGCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTATGGACGGCGATCAATCGATCGCCGTCCTCGTGAAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGCGCCCGCGAGCGCGCCGCCCGTGACTTTGTTGAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGATCACATTGGGCGCGCCGAGCGCGGCCAGCGTCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTGGCGTGGGACGAGGACGAGCCGACTTTGGAGATTT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTATCGTGCGCGCGACGGCGCACGGAAAGCGCGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGACAGACGAGGTGCGTATCCCGCAGAGGCATTACG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TAAAGAATGAGTTTGGCGGAGTCATTGCGGGCGGTCCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGGAGATGGCGATGAACTAACGTAAAAGATATCGTTAAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGTTGCGGCGCTTCGAGCACTGGCTGCGCTCACTGGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCAACCGGGGCTATCCGCGTTTCATTTTCGTGGCAAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCACGCGCTTGTGTAGCTCTCTGAACCCGAACCATCC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TATTGCCCGGAGGGGCGCGCCTTGCGTATCAGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCAACCGACCCCGGAGCGGGTAGCAGCGTTTGGCGTTG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCCTTGGGCGTGCGCCTCTTCGTCTTCGTCAGGGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTCGATTTTTGTCCATTTTGTGCGATTTTTGTGTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGGACTTTGACGATGACGGGACGCAGCATGTATTCGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGCCCTCGCGCCGCCCGGCAGCCGGATCGCCCCGACC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGTTTCCGTCGTTTTTTGTGCGATGATGATGATGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCTATTTTGAGGCGCGCACAGGGATGCAATACGAAGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TAGGCGGGACGGTTGGATGACCTGATAGGTGAGGTGCTGTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGTACTTGCGTGTGCCGGTGACAATCGTGATTGTCCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTTAACGCCAGCATCGCCAGGCTCTCGAACTCGTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTGAAAGGAAGGAAACAATGGCGAACGGCGAACAGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGAGGGCGGGCGCGTCATCGGCGCGAATGCGCTCGCCCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCCGCCGCCGGATCGCCCCGCCCAGGGGTAATCAGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGAAACGCAGGCTTGACCTCGCCTACAACGCCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGTGCGTCGATTGACTAGGCGTTGCTACGTCGCGTCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCTTATGCTGAAAACAGCACAGAAAGGGGGGATTGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTGGTCGCCCGCCACGCTGAACAACCGCAAGTTCAACCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGGCGCTCGGTACGGGATGGGAACTGGTGATGGCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGGTCCATCGAGCCGGGACCTGTTACATCGAAATCAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTTCGCCATACAGACACCCCGAGCTGGTCTTGACCGAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TGCACCAGCGCGCTGGAAAGAGTCGCGCGGGGATCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TATGATGTCAGAGCGCTGCTCCCAGGGCTCCGGAGGCTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCGGATTGCGGCGCTGCCGGATGAAATACAGCTCGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TCGGATAGTCGCGGGGTTAGCCTTGATGCACTAGTGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TAGATATGCGCGCAAGCGTCACGAGACGACGCAAGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TATTGCGGTCAAACGCGCTATCGGACGCGGCTAGTTT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA	TTCGGTCGCAATCATCAATAGACGCACACGCGCAAAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAA

>NC_009767|36|31|1975555-1984892|CRISPRCasFinder
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCCACGGGCTGCACGACGGCCTCCAGCGCACGCTGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAACG	CGGCAGCGCCGCCGGCAGCACGACTAGCCCGCCGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAACC	CGGCTGCTGCATGCTGGACTACGCGCGCGTTCGAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAATC	GCCATCTACGCCGTGCGCGGGATGTGTGCGTGGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTCGTCGCCGAGCGAGCGACGCCGTTTTCCGTGACGAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGACTTCAGGTATTGCCGACCTTTATCTTCTCCTAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTTGATGCGCACTGTTGAGCGCATTGAATACGTTCTTTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATGCGGCGTATGAGCGTCGCCGCCCCCGCCGCGAATAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCAGTTTGACGCCGACGCCCGCCGAACCTCGCACGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGCGCGCAAAGAGCACGACTTCATTCGAGGGACCGGCGTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCCAATCAAGAATGGCGCGACGGTCATTCACGTCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GATTTGCCGAATACGCTCACGCGTAAGACCAATGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGACTGGCGCAATTACATCTTCGCCAATCGTCGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTAAACCTTTTTGTGCGCTTGTATCTCCATACCGTAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TACCCCCGCACCCAGCAACCCCGTGCTGATTGAGTTTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CATACATCGGGCGACAGCCCATCTCCGACTTGTCCAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGTTTGCGTCTGCGCCATTTGAAACGCCATCACGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCCATGCCGATGAACCGCCCTTGCGCGTCAAAGAAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTATACCCACGATGAATGCGTCCATATCGGTGGAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTTGCGTCTGGATTGCCTGCAACCGCGACAGATGCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ACCCTGGTACTATTCTGAACTAGTACCATTGCCTG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTTCGCGAGAGAGAGCACGCCAGTGACCGAAAAAGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGATCCGGCAAGATCGCATTCACATCACGAATATCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CAGGTTACCCTGGTCAGCTTCCAGACAGGATTTATC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	AGACATGGACGATTCGTCGCCGCGCAATGTTGCTTGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCTGATACCGCGGATCCATCATCGTCCCGGTCTTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCAGGACGGCAGCCGCCGTCGACCGAAAACCCCAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGTGCATCGTGGCGTTGGCAAACTCTGCGTTTGGCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTAGGGATTGGTATATTCAGACCGATTCAGCGCCAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGTTCCGTGAGCGGAAGTATCGTTATCAGTTGCACAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAA	CATCCGACCATCGCCCGGCGCCTTTGCGCAAACGCC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAA	CGGGGAACTCCAATGAGAGGGGAACCAATTGAAGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAA	GGACGACGACGACGGCGGGCACCCAGGGACGCCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GAGACGCCGAACTCGGACGTCAACCGTGTGGAACGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCGCTCCGGGAGGTATGGGCGTGGTCAACTGGTCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTGGACGCGCGCCGGTGAGACCTGCCATCAGACCTTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTACTCAGTCGTTGCGCGAGAGTCTGCACGTGCTCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGGTGCTCGACGCATGGACGGCGTCGCTGCGTGCATC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCTGCGGACGCAAGTTCCGTCTGCGTCGCTGATGCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCAGTTTCGCTTGAGACGCTGCGACCTGAGCAGTGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATGAGGAGCGGTGTCATGGGTGTCATGGAGGATGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTGGCGGAGGCGATGGACGCCGCGCTGTCCATCGCCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGCGACGGGGGTGGTGTATTTGCGTGGCGGATGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGGACCGCCGAATCCGCGACGGTGCCGGAAGCGACCGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGGTGTGGCTCAACCACACCTTGCCGATTAGGAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGCCGTCCGCTGGCGTCCGGTCGGCGCGGTCGCCAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGCCGCAACGCTTCAAACATGCGCGGTTCCGACGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ACGCAAGACAATCAGGTCGCATTTCTCACATTGCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCAATCGAGCGCATTGTCGTCGCCAGCGTGCGGTCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGCCGCCGCGCGCCTGAACCGTCACGCGCCGTTGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CAACGCGCCCGCGACGGCCGCAGCAGGCTTTCGCGGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCAGCAGCGCCAGCGGCGGGATCACGGGTAGAACGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGGAGAAGATGCCGCCGCCCGCCGTTGAACGCCTGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGTAACGCAGAAGGCGGGAGCAGCGGTGCGGGCGCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTGGAGAACGGAACGACGATCCTGGTTGCAGGCGTCAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCCGCGCCTCGCACCAAAAGCGCCAGCGCCTCGTG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGCGCGCGCGAGGATGGACCCCATGCCGAAATCAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTGATGGCGTGAAGCGACGGGCTGTTGATTTTGATG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGATTATATGGGTCTTCTGGTTCTTCGAGAAACAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGAGAGGAGAGATGAGGAGCATCCTCAAGGAAAGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGTACTGGATATTGACAACGGTTCGGTTCCGGTCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTCGTATTGTCGATGCGTTTCGGCGGTGACATATGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGGTGCTGCGATTCTCGGCGGCGCTGGGTGAGTCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGGAAGCATAGACAGCGCGCGTCCACAGCAACCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTTATTGCAGGGAAAATATGGTTTTACAGATGGCTAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGGAGACGAATATGACGAGGAGGCGGACAGGTATTAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGAGCGCGGCTCTGCGTGGTTTTTAAGCACTCCGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGAAGTACGTCGCTGGACGGCGTACTTCCAGCCGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ACTACTGGCTGCTCGCGCGCGATCCCCCCGCGCGCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGTACTGGAACGGCGAGTGCGATGACGCGATTGCGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGCGTGGCTTTGGGAGCCGAACGCGCGCTCCGAAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGTTGCGCCAGAGCGAGCGCGGCGGCGACGGCGCGGAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGCATGTCGGTGCTGTGCGAGTTCAATGCCATCCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATACCTGTCTTCAATAGCCGAAGAACCCAACTCCAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGCCAGGTTTGTACAAGGCGCAAAAAGAGTTGGCGGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGGAGCGGGCGATGCAGGATCCGCGATTTCCGACAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCCGATTGGAAGCGGCGCGCTCGATGTGGATGAGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCAGTGCTTCGCATACGCGCTGATCGTCGGGTGAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTACCCGGGCCGCTTCCAGATCGACGTTTCGATTGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATAGCTGACTGCGCGTCTGTAGTCGGGGCTGTCTTT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGTCGGCATTGTCGGCGCTGTGCGGTCTGCGTGGGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	AGTCGAAGCCTAGGGGGCTAGATTGGAGAACGCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGCGGCCGTTGCTCGCGATCTTCTGGCGCTTGACGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGAGTACGAGGTCGACTACGAGACCTCGTTTCAGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGGGCGCGCCATCGCCGCCGCGCGCGAGGCGCGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGCCTCAACCACGCCGCGCCGGTTAAACAATCGCCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTACGTTGGTTGTCGTCGATGCCGACACCGATGACG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGTCTGGACCGGGCGCGTCGAAAACGTCGAAAGCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TATGGACGGCGATCAATCGATCGCCGTCCTCGTGAAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGCGCCCGCGAGCGCGCCGCCCGTGACTTTGTTGAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGATCACATTGGGCGCGCCGAGCGCGGCCAGCGTCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTGGCGTGGGACGAGGACGAGCCGACTTTGGAGATTT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTATCGTGCGCGCGACGGCGCACGGAAAGCGCGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GACAGACGAGGTGCGTATCCCGCAGAGGCATTACG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	AAAGAATGAGTTTGGCGGAGTCATTGCGGGCGGTCCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGAGATGGCGATGAACTAACGTAAAAGATATCGTTAAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTTGCGGCGCTTCGAGCACTGGCTGCGCTCACTGGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CAACCGGGGCTATCCGCGTTTCATTTTCGTGGCAAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCACGCGCTTGTGTAGCTCTCTGAACCCGAACCATCC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATTGCCCGGAGGGGCGCGCCTTGCGTATCAGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CAACCGACCCCGGAGCGGGTAGCAGCGTTTGGCGTTG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCCTTGGGCGTGCGCCTCTTCGTCTTCGTCAGGGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTCGATTTTTGTCCATTTTGTGCGATTTTTGTGTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGACTTTGACGATGACGGGACGCAGCATGTATTCGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCCCTCGCGCCGCCCGGCAGCCGGATCGCCCCGACC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGTTTCCGTCGTTTTTTGTGCGATGATGATGATGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTATTTTGAGGCGCGCACAGGGATGCAATACGAAGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	AGGCGGGACGGTTGGATGACCTGATAGGTGAGGTGCTGTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTACTTGCGTGTGCCGGTGACAATCGTGATTGTCCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTTAACGCCAGCATCGCCAGGCTCTCGAACTCGTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGAAAGGAAGGAAACAATGGCGAACGGCGAACAGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGAGGGCGGGCGCGTCATCGGCGCGAATGCGCTCGCCCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGCCGCCGGATCGCCCCGCCCAGGGGTAATCAGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGAAACGCAGGCTTGACCTCGCCTACAACGCCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTGCGTCGATTGACTAGGCGTTGCTACGTCGCGTCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTTATGCTGAAAACAGCACAGAAAGGGGGGATTGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTGGTCGCCCGCCACGCTGAACAACCGCAAGTTCAACCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGCGCTCGGTACGGGATGGGAACTGGTGATGGCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGTCCATCGAGCCGGGACCTGTTACATCGAAATCAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTCGCCATACAGACACCCCGAGCTGGTCTTGACCGAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCACCAGCGCGCTGGAAAGAGTCGCGCGGGGATCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATGATGTCAGAGCGCTGCTCCCAGGGCTCCGGAGGCTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGGATTGCGGCGCTGCCGGATGAAATACAGCTCGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGGATAGTCGCGGGGTTAGCCTTGATGCACTAGTGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	AGATATGCGCGCAAGCGTCACGAGACGACGCAAGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATTGCGGTCAAACGCGCTATCGGACGCGGCTAGTTT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGGTCGCAATCATCAATAGACGCACACGCGCAAAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT

>NC_009767|36|5|1975555-1984892|CRT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCCACGGGCTGCACGACGGCCTCCAGCGCACGCTGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAACG	CGGCAGCGCCGCCGGCAGCACGACTAGCCCGCCGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAACC	CGGCTGCTGCATGCTGGACTACGCGCGCGTTCGAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAATC	GCCATCTACGCCGTGCGCGGGATGTGTGCGTGGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTCGTCGCCGAGCGAGCGACGCCGTTTTCCGTGACGAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGACTTCAGGTATTGCCGACCTTTATCTTCTCCTAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTTGATGCGCACTGTTGAGCGCATTGAATACGTTCTTTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATGCGGCGTATGAGCGTCGCCGCCCCCGCCGCGAATAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCAGTTTGACGCCGACGCCCGCCGAACCTCGCACGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGCGCGCAAAGAGCACGACTTCATTCGAGGGACCGGCGTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCCAATCAAGAATGGCGCGACGGTCATTCACGTCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GATTTGCCGAATACGCTCACGCGTAAGACCAATGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGACTGGCGCAATTACATCTTCGCCAATCGTCGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTAAACCTTTTTGTGCGCTTGTATCTCCATACCGTAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TACCCCCGCACCCAGCAACCCCGTGCTGATTGAGTTTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CATACATCGGGCGACAGCCCATCTCCGACTTGTCCAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGTTTGCGTCTGCGCCATTTGAAACGCCATCACGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCCATGCCGATGAACCGCCCTTGCGCGTCAAAGAAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTATACCCACGATGAATGCGTCCATATCGGTGGAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTTGCGTCTGGATTGCCTGCAACCGCGACAGATGCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ACCCTGGTACTATTCTGAACTAGTACCATTGCCTG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTTCGCGAGAGAGAGCACGCCAGTGACCGAAAAAGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGATCCGGCAAGATCGCATTCACATCACGAATATCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CAGGTTACCCTGGTCAGCTTCCAGACAGGATTTATC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	AGACATGGACGATTCGTCGCCGCGCAATGTTGCTTGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCTGATACCGCGGATCCATCATCGTCCCGGTCTTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCAGGACGGCAGCCGCCGTCGACCGAAAACCCCAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGTGCATCGTGGCGTTGGCAAACTCTGCGTTTGGCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTAGGGATTGGTATATTCAGACCGATTCAGCGCCAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGTTCCGTGAGCGGAAGTATCGTTATCAGTTGCACAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAA	CATCCGACCATCGCCCGGCGCCTTTGCGCAAACGCC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAA	CGGGGAACTCCAATGAGAGGGGAACCAATTGAAGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAA	GGACGACGACGACGGCGGGCACCCAGGGACGCCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GAGACGCCGAACTCGGACGTCAACCGTGTGGAACGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCGCTCCGGGAGGTATGGGCGTGGTCAACTGGTCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTGGACGCGCGCCGGTGAGACCTGCCATCAGACCTTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTACTCAGTCGTTGCGCGAGAGTCTGCACGTGCTCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGGTGCTCGACGCATGGACGGCGTCGCTGCGTGCATC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCTGCGGACGCAAGTTCCGTCTGCGTCGCTGATGCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCAGTTTCGCTTGAGACGCTGCGACCTGAGCAGTGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATGAGGAGCGGTGTCATGGGTGTCATGGAGGATGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTGGCGGAGGCGATGGACGCCGCGCTGTCCATCGCCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGCGACGGGGGTGGTGTATTTGCGTGGCGGATGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGGACCGCCGAATCCGCGACGGTGCCGGAAGCGACCGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGGTGTGGCTCAACCACACCTTGCCGATTAGGAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGCCGTCCGCTGGCGTCCGGTCGGCGCGGTCGCCAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGCCGCAACGCTTCAAACATGCGCGGTTCCGACGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ACGCAAGACAATCAGGTCGCATTTCTCACATTGCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCAATCGAGCGCATTGTCGTCGCCAGCGTGCGGTCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGCCGCCGCGCGCCTGAACCGTCACGCGCCGTTGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CAACGCGCCCGCGACGGCCGCAGCAGGCTTTCGCGGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCAGCAGCGCCAGCGGCGGGATCACGGGTAGAACGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGGAGAAGATGCCGCCGCCCGCCGTTGAACGCCTGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGTAACGCAGAAGGCGGGAGCAGCGGTGCGGGCGCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTGGAGAACGGAACGACGATCCTGGTTGCAGGCGTCAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCCGCGCCTCGCACCAAAAGCGCCAGCGCCTCGTG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGCGCGCGCGAGGATGGACCCCATGCCGAAATCAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTGATGGCGTGAAGCGACGGGCTGTTGATTTTGATG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGATTATATGGGTCTTCTGGTTCTTCGAGAAACAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGAGAGGAGAGATGAGGAGCATCCTCAAGGAAAGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGTACTGGATATTGACAACGGTTCGGTTCCGGTCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTCGTATTGTCGATGCGTTTCGGCGGTGACATATGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGGTGCTGCGATTCTCGGCGGCGCTGGGTGAGTCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGGAAGCATAGACAGCGCGCGTCCACAGCAACCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTTATTGCAGGGAAAATATGGTTTTACAGATGGCTAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGGAGACGAATATGACGAGGAGGCGGACAGGTATTAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGAGCGCGGCTCTGCGTGGTTTTTAAGCACTCCGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGAAGTACGTCGCTGGACGGCGTACTTCCAGCCGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ACTACTGGCTGCTCGCGCGCGATCCCCCCGCGCGCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGTACTGGAACGGCGAGTGCGATGACGCGATTGCGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGCGTGGCTTTGGGAGCCGAACGCGCGCTCCGAAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGTTGCGCCAGAGCGAGCGCGGCGGCGACGGCGCGGAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGCATGTCGGTGCTGTGCGAGTTCAATGCCATCCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATACCTGTCTTCAATAGCCGAAGAACCCAACTCCAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGCCAGGTTTGTACAAGGCGCAAAAAGAGTTGGCGGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGGAGCGGGCGATGCAGGATCCGCGATTTCCGACAG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCCGATTGGAAGCGGCGCGCTCGATGTGGATGAGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCAGTGCTTCGCATACGCGCTGATCGTCGGGTGAAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTACCCGGGCCGCTTCCAGATCGACGTTTCGATTGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATAGCTGACTGCGCGTCTGTAGTCGGGGCTGTCTTT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGTCGGCATTGTCGGCGCTGTGCGGTCTGCGTGGGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	AGTCGAAGCCTAGGGGGCTAGATTGGAGAACGCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGCGGCCGTTGCTCGCGATCTTCTGGCGCTTGACGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGAGTACGAGGTCGACTACGAGACCTCGTTTCAGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGGGCGCGCCATCGCCGCCGCGCGCGAGGCGCGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGCCTCAACCACGCCGCGCCGGTTAAACAATCGCCA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTACGTTGGTTGTCGTCGATGCCGACACCGATGACG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGTCTGGACCGGGCGCGTCGAAAACGTCGAAAGCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TATGGACGGCGATCAATCGATCGCCGTCCTCGTGAAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGCGCCCGCGAGCGCGCCGCCCGTGACTTTGTTGAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGATCACATTGGGCGCGCCGAGCGCGGCCAGCGTCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTGGCGTGGGACGAGGACGAGCCGACTTTGGAGATTT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTATCGTGCGCGCGACGGCGCACGGAAAGCGCGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GACAGACGAGGTGCGTATCCCGCAGAGGCATTACG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	AAAGAATGAGTTTGGCGGAGTCATTGCGGGCGGTCCGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGAGATGGCGATGAACTAACGTAAAAGATATCGTTAAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTTGCGGCGCTTCGAGCACTGGCTGCGCTCACTGGT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CAACCGGGGCTATCCGCGTTTCATTTTCGTGGCAAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCACGCGCTTGTGTAGCTCTCTGAACCCGAACCATCC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATTGCCCGGAGGGGCGCGCCTTGCGTATCAGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CAACCGACCCCGGAGCGGGTAGCAGCGTTTGGCGTTG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCCTTGGGCGTGCGCCTCTTCGTCTTCGTCAGGGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTCGATTTTTGTCCATTTTGTGCGATTTTTGTGTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGACTTTGACGATGACGGGACGCAGCATGTATTCGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCCCTCGCGCCGCCCGGCAGCCGGATCGCCCCGACC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGTTTCCGTCGTTTTTTGTGCGATGATGATGATGC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTATTTTGAGGCGCGCACAGGGATGCAATACGAAGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	AGGCGGGACGGTTGGATGACCTGATAGGTGAGGTGCTGTA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTACTTGCGTGTGCCGGTGACAATCGTGATTGTCCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTTAACGCCAGCATCGCCAGGCTCTCGAACTCGTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TGAAAGGAAGGAAACAATGGCGAACGGCGAACAGA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGAGGGCGGGCGCGTCATCGGCGCGAATGCGCTCGCCCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CCGCCGCCGGATCGCCCCGCCCAGGGGTAATCAGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGAAACGCAGGCTTGACCTCGCCTACAACGCCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GTGCGTCGATTGACTAGGCGTTGCTACGTCGCGTCT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CTTATGCTGAAAACAGCACAGAAAGGGGGGATTGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTGGTCGCCCGCCACGCTGAACAACCGCAAGTTCAACCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGCGCTCGGTACGGGATGGGAACTGGTGATGGCGAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GGTCCATCGAGCCGGGACCTGTTACATCGAAATCAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TTCGCCATACAGACACCCCGAGCTGGTCTTGACCGAT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	GCACCAGCGCGCTGGAAAGAGTCGCGCGGGGATCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATGATGTCAGAGCGCTGCTCCCAGGGCTCCGGAGGCTC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGGATTGCGGCGCTGCCGGATGAAATACAGCTCGAC
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	CGGATAGTCGCGGGGTTAGCCTTGATGCACTAGTGG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	AGATATGCGCGCAAGCGTCACGAGACGACGCAAGCG
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	ATTGCGGTCAAACGCGCTATCGGACGCGGCTAGTTT
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT	TCGGTCGCAATCATCAATAGACGCACACGCGCAAAAA
GTTTCAGTGCTCTTCTGCGAGCCGAAAATTCGGAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120072.1|1990916_1992527_-|citramalate-synthase	unknown	unknown	gnl|CDD|237068
NC_009767.1|WP_012120061.1|1964473_1964803_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120069.1|1987628_1988243_-|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl|CDD|179314
NC_009767.1|WP_012120058.1|1961007_1962699_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	unknown	unknown	gnl|CDD|235085
NC_009767.1|WP_012120065.1|1971247_1972381_+|magnesium-chelatase-ATPase-subunit-I	unknown	unknown	gnl|CDD|131085
NC_009767.1|WP_012120076.1|1996236_1997259_-|ketol-acid-reductoisomerase	unknown	unknown	gnl|CDD|235491
NC_009767.1|WP_012120073.1|1992551_1993391_-|prephenate-dehydratase	unknown	unknown	gnl|CDD|223155
NC_009767.1|WP_012120064.1|1969931_1971233_+|BCD-family-MFS-transporter	unknown	unknown	gnl|CDD|349950
NC_009767.1|WP_012120075.1|1995518_1995929_-|four-helix-bundle-protein	unknown	unknown	gnl|CDD|377534
NC_009767.1|WP_012120066.1|1972430_1975265_-|DNA-polymerase-III-subunit-epsilon	DinG	COG1199_DinG_CAS-IV-A	gnl|CDD|236148
NC_009767.1|WP_083760293.1|1965870_1969902_+|magnesium-chelatase-subunit-H	unknown	unknown	gnl|CDD|237117
NC_009767.1|WP_012120070.1|1988332_1989751_-|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl|CDD|235490
NC_009767.1|WP_012120059.1|1962719_1963541_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein	unknown	unknown	gnl|CDD|237293
NC_009767.1|WP_012120062.1|1964852_1965968_+|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase	unknown	unknown	gnl|CDD|237458
NC_009767.1|WP_012120067.1|1985595_1986717_-|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl|CDD|234832
NC_009767.1|WP_012120071.1|1989929_1990859_-|branched-chain-amino-acid-transaminase	unknown	unknown	gnl|CDD|235841
NC_009767.1|WP_012120074.1|1993617_1995288_-|2-isopropylmalate-synthase	unknown	unknown	gnl|CDD|234864
NC_009767.1|WP_012120057.1|1959148_1960393_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	unknown	unknown	gnl|CDD|235076
NC_009767.1|WP_012120060.1|1963531_1964245_+|magnesium-protoporphyrin-IX-methyltransferase	unknown	unknown	gnl|CDD|236059
NC_009767.1|WP_012120068.1|1987145_1987622_-|YqhA-family-protein	unknown	unknown	gnl|CDD|377024

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012120066.1|1972430_1975265_-|DNA-polymerase-III-subunit-epsilon	DinG	COG1199_DinG_CAS-IV-A	1.2e-141	467.8	0.5

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120072.1|1990916_1992527_-|citramalate-synthase	gnl|CDD|237068	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional.	0
NC_009767.1|WP_012120073.1|1992551_1993391_-|prephenate-dehydratase	gnl|CDD|223155	COG0077, PheA, Prephenate dehydratase [Amino acid transport and metabolism].	1.83079e-101
NC_009767.1|WP_012120069.1|1987628_1988243_-|3-isopropylmalate-dehydratase-small-subunit	gnl|CDD|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	1.10039e-116
NC_009767.1|WP_012120058.1|1961007_1962699_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	gnl|CDD|235085	PRK02910, PRK02910, ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit B.	0
NC_009767.1|WP_012120065.1|1971247_1972381_+|magnesium-chelatase-ATPase-subunit-I	gnl|CDD|131085	TIGR02030, Magnesium-chelatase_subunit_ChlI, magnesium chelatase ATPase subunit I. This model represents one of two ATPase subunits of the trimeric magnesium chelatase responsible for insertion of magnesium ion into protoporphyrin IX. This is an essential step in the biosynthesis of both chlorophyll and bacteriochlorophyll. This subunit is found in green plants, photosynthetic algae, cyanobacteria and other photosynthetic bacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	9.35182e-179
NC_009767.1|WP_012120076.1|1996236_1997259_-|ketol-acid-reductoisomerase	gnl|CDD|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NC_009767.1|WP_012120064.1|1969931_1971233_+|BCD-family-MFS-transporter	gnl|CDD|349950	cd06176, MFS_BCD_PucC-like, Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily. The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.01509e-139
NC_009767.1|WP_012120075.1|1995518_1995929_-|four-helix-bundle-protein	gnl|CDD|377534	pfam05635, 23S_rRNA_IVP, 23S rRNA-intervening sequence protein. This family consists of bacterial proteins encoded within an intervening sequence present within some 23S rRNA genes. It folds into an anti-parallel four-helix bundle and forms homopentamers.	2.81082e-32
NC_009767.1|WP_012120066.1|1972430_1975265_-|DNA-polymerase-III-subunit-epsilon	gnl|CDD|236148	PRK08074, PRK08074, bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.	0
NC_009767.1|WP_083760293.1|1965870_1969902_+|magnesium-chelatase-subunit-H	gnl|CDD|237117	PRK12493, PRK12493, magnesium chelatase subunit H; Provisional.	0
NC_009767.1|WP_012120070.1|1988332_1989751_-|3-isopropylmalate-dehydratase-large-subunit	gnl|CDD|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NC_009767.1|WP_012120059.1|1962719_1963541_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein	gnl|CDD|237293	PRK13185, chlL, protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional.	0
NC_009767.1|WP_012120062.1|1964852_1965968_+|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase	gnl|CDD|237458	PRK13654, PRK13654, magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional.	0
NC_009767.1|WP_012120067.1|1985595_1986717_-|3-isopropylmalate-dehydrogenase	gnl|CDD|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NC_009767.1|WP_012120071.1|1989929_1990859_-|branched-chain-amino-acid-transaminase	gnl|CDD|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	0
NC_009767.1|WP_012120074.1|1993617_1995288_-|2-isopropylmalate-synthase	gnl|CDD|234864	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated.	0
NC_009767.1|WP_012120057.1|1959148_1960393_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	gnl|CDD|235076	PRK02842, PRK02842, ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit N.	0
NC_009767.1|WP_012120060.1|1963531_1964245_+|magnesium-protoporphyrin-IX-methyltransferase	gnl|CDD|236059	PRK07580, PRK07580, Mg-protoporphyrin IX methyl transferase; Validated.	6.63359e-125
NC_009767.1|WP_012120068.1|1987145_1987622_-|YqhA-family-protein	gnl|CDD|377024	pfam03350, UPF0114, Uncharacterized protein family, UPF0114.	2.01774e-24

Protein sequences

>NC_009767.1|WP_012120066.1|1972430_1975265_-|DNA-polymerase-III-subunit-epsilon
MDQIYVAIDVETTGLEAGVDEIIEIAAVKFRTGEVIETFDTLVQPRHSLPLNSSRLTGITAEMLAGAPRFSEVAPRFAAFLKNYPLVGHNVRFDINMLQAQGMRLPQPAFDTFELATLLMPRTPAYRLSALAETLGIVHDEAHRALSDADVTRQVFLHLLRRIDALSLNDLNEIVRLTSRVDWTLRPLFEAAQRAKALRVFVDETPISDTDSRESDEKLTPLKPTGNDRPIDLAEIRWFFSPAGALGRAFEGYEQRNQQVRMSEAVADTLNQGGTLIAEAGTGTGKGLAYLVPAALHAARRGERVVISTNTINLQDQLFFKDIPALQRVMSNGVDDKPPFTAALLKGRSNYLCLKRYHDLRRDRDQRLMSDDVRALLKVQLWLHATESGDRAELPLQEGEHATWSKLSAAWDQCTGPRCSEFHRCFFFKARRQAEAAHLVIVNHALLVADLAAENDVIPPYDYLIIDEAHNLEDVATDQLSFNVDREGLLAFLDDIFVEDQAQIVGGLLSELPNHFRESMVTRIDIDRADTITAALRPAVARARDAVYGCFNTLIAFVRRDAELSAADARLRISSALRRKPAWAEVERAWDMLNNALTAIGEGLGQLETLLIDLKDAELPEYDALMLRVQTLKRYATEVRINIGHILTGGAEEKVTWLTHDRLRDTLTLSAAPLSVAEILRTNLFERKSATVLTSATLSVGGDFRFVRERIGLDEAEELALESPFDYTRQALLYIPNDIPEPSHPGYQRAMEQAIIDLARATNGRMLVLFTAINALRQTYRAIQEPLEDAGIAVLGQGIDGSRRSLLERFKEFPGTVLLGTSSFWEGVDVVGDALSVLVIAKLPFSVPTDPIFAARSEQFDDAFNQYAVPQSILRFKQGFGRLIRSKDDRGIVAVLDRRLLTKKYGQTFLDSLPHTTVRSGPLQRLPDLAKRFLAATNGMSGTA
>NC_009767.1|WP_012120065.1|1971247_1972381_+|magnesium-chelatase-ATPase-subunit-I
MTTTSVETQNGKTTDSGVTTLPVYPFTAIVGQAELKLALLLCVIDPTIGGVMVMGHRGTAKSTAVRALAALLPPQRAVAGCPYGCDPAAPSSICPHCAAPDQDAAKNGQEKRRASAKRPPSVLRPVPVVDLPLGATEDRVVGALDIERALVEGVQTFAPGLLARANRGFLYIDEVNLLEDHLVDLLLDVAQSGVNVVEREGISVRHPARFVLVGSGNPEEGDLRPQLLDRFGLHARITTIDDVAERVEIVKRRRAFDADPVAFAQQWEREQQRLQRRIRMAQKRLPSVELTDEALYAAARLCVALNIDGHRGELTLARAAVALAAFEGRESAQPSDIARVATLSLRHRLRKDPLETSGDDARIERAVAETIGAAARA
>NC_009767.1|WP_012120064.1|1969931_1971233_+|BCD-family-MFS-transporter
MTLIKNIRLGLLHVAIAMTFVLINSVLNRIMIHDLGILASVVAVLVVLPYILSPAQVWIGQYSDTHPMFGYRRTPYIALGTLLALAGAALAPHAALALVRDPLIGVPLAILLFGMWGVGYNLAVVAYLALASDMSTEQQRSRTVAIMWFMMIASVIVTAIVVGRALEPYSEERLFTVFLETGGVALALALVGLIGLEPRREPIAVQQSRAGQVAAIRAVLDNPQARIFFVYLIMMLAAILGQDVLLEPFGAQAFGMNVKETTQLTAMWGGATLSALLLYGAVLSRWMSKKRGAMIGGSIAATGFLLIALSGMLAIEAMFLPGIVLLGFGTGIATTTNLALMLDMTTAEQVGLFIGAWGVADALARGVGTLLGGVMRDVIAHMSGSAVSGYVSVFLIEALLLGISLVLLQRIDVTAFRSRQPSLTELVALSGDA
>NC_009767.1|WP_083760293.1|1965870_1969902_+|magnesium-chelatase-subunit-H
MPIVGRVSKASRTIPVRAGNRTHHSTNGSYQHKSPGFRGGLGVAHRITSHPEPLTHKDSAMRFVFLTMDGNHFAALREGAGLLHRDEGIALSLACYDTNALRTAADWQRLTDDVAASDFVFGSMLFGEDFVRPLEPILAQATAPVCIITSNPALIRTTRLGRFDLRKKVEEQEASLLSRWMHKFRPKNGRGEGQRQLALMRNLGRVLQHIPGKARDLATYVAVHQYWMHSSPENLRRMLVMLIERYVPGYQGRLKVLPPIEYPDVALLHPDAPEPFADEREYEKWLAQRAKRRKNEPRQGAVGLLTLRTVALSGNMAHLHALYRALEQRGLDVRMAYAAGLDFRPAIERFFLERESRMHWFGSGNAGPHPRRARIDALVNGVGFALVGGMAASQPDEAVAALRDLDTRYLGFIPLSFQRVEEWRRDDSGLTPIQVAMNVALPELDGAIDPLVFGGPTVDSDRFVPLPEQIELAAERIARHVALRRTPPRTRKLAIVLFNFPPTLGNAGTAAYLDVFASVHRLLCALCDAGYTVEVPASPEELRHLVVQHNADLFGTPGSVAARLSINDYRRLFPAYTAIEPFWGAAPGELLTDGRDFFICGHVFGNVFVGLQPSFGYERDPMRLLMAKDAAPHHGFAAFYTWVAHVFGAHAVLHFGTHGALEFMPGKQSGLSAQCWPARLLGPLPNIYYYSVNNPSEGTIAKRRSAATLVSYMVPPLQQAGLYKGLRRLKDSLDAYRARPQSGMLDDIRAQAEQLGIGSELVDIKNDEAYVAALAHELLQIEQRMIPVGLHVLDKEPNPAELTDVLALVAAFACPSGVEQPLTHLVAAAMGYDYGRLQAALGHDPQAQEVFQQIDALVRDAMRALVDEYRNRAFSSPVPGVTFEQTLLQRASVSVGVLRRFRIYLEELLDRMMHDHELRNLLHALDGGYIPPSPGNDVVRNPAVVPTGRNIHGLDPYRVPTAVAQATGERLVSDLLARLCREQGRMPESVAIVLWGTDNLKSDGEGIAQALALMGARPVADELGNISDVALIPLAELGRPRIDAVMTVSGIFRDLFSHQMQLLSKAARLAAHADEPPEWNYVRKHALAHAVELGISLDEAATRVFSNAPGSYGANVNHLVESSTWNSDAEMSEAFVSRKSFAPGAHGEWRDARAVLERALATVDATFQNVDSFEIGISDIDHYYEYLGGVTKSVEKLRGSRPRVFVAEALATTGERISTLEQQVRIETRAKLLNPKWFEAMLAHGYQGVHEIEARVGNTYGWSATADAVEGWVYQGVAETFMLDETMRERLARLNPHAATAIAGRLLEAHSRGFWQADEATLDALQAIYADLEDRLEGVAVER
>NC_009767.1|WP_012120062.1|1964852_1965968_+|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase
MINMPGEYSPTTRHALREAILNPRFYTTDFRAIDRLNVAHMRDEFDWIRNEFEFDYNKKHFVRNEEFLANFDDMPARDLFIEFLERSCTAEFSGCLLYAEMVKHLHDPTLRAIFRCMSRDEGRHAGFLNKTMADLGVEMNLQVLHTRKKYTYFQPKFIFYSVYLSEKIGYARYITIYRHLQHHPQGMIHPIFKWFEKWCNDEYRHGEFFSLLMRSQPDLLRGGNLRWIRFFLLAVYATMYLNDARRAGFYEALGLNWRDYDQRVIRLTNHIATQVFPVTLPVDDPRFFRHLDACVRYDAQIRALEGRNDPIAQVQRARLGAGIAARLLATYRLPPAPTTDANRWKGLEGFPNYPGPGWKQDASLNERVISA
>NC_009767.1|WP_012120061.1|1964473_1964803_+|hypothetical-protein
MKRLLLALPALIAGGLWLWYRREKVMEGEGVVYLQSEHEHFHLHVDLPPGMEIEPGDTLEILTVPQTHGQTNGEMTYSSRIRLTKASSLRRELVKRSSLVEINELVEHP
>NC_009767.1|WP_012120060.1|1963531_1964245_+|magnesium-protoporphyrin-IX-methyltransferase
MAMIDITRHKNTLRDYFDRDGFRRWSAIYGDAEVSRIRRTIRVGHARMLARAETWLLEWIGATGRAPSSLSALDAGCGTGLFSIMLAQHGINVTAVDIAPQMVAAAAERAQTAGVAQRITFTAGDIEDVAGVFDVVACFDVLIHYPQPAFDQLLRHLAQRARGMLLFTYAPYEPFLAAMHWIGGFFPRAHRRTEIQMIRENDVRRLVAGHGLRVGRIEPIRSGFYHVNLVEARGVRG
>NC_009767.1|WP_012120059.1|1962719_1963541_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein
MSLTLAIYGKGGIGKSTTSSNLSAALALKGAKVLQIGCDPKHDSTFALTGMLQPTVIDVLTEVDFHHEEVSVEDVVHTGFAGVDTLESGGPPAGSGCGGYVVGETVKLLHEFGLYDKYDVIVFDVLGDVVCGGFSAPLNYADYGVIIACNDFDSIFAANRLCLAIKQKSARYRVELAGIIANRVDYELGGGTTLLEQFAETVGTQIIGRVPYHDLIRRSRLMGKTLFEMEGPGKEECTTPFLEMAEYLLNRPRSTVPKPMGDREIFNVIGGWR
>NC_009767.1|WP_012120058.1|1961007_1962699_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B
MRLALWMYQGTAHHGVGRIANSMRGVHAVFHAPQGDDYVNPIFTMLERTPDFPRMTTSIVSGRDLAQGTVRLPETLRQVDAQVQPDLIIVCASCSTILLQEDLERMAHSAGTRAETLVYDANPYRMQEVRSADGLFTLLTQRFARSQPPTAVPSVNILGPASLGFHNRSDLICLRRMLATLGVQVNVVAPLGASIRDLERLPAAWATIAPYRELGQNAARWLDEQFGVPALTDSPIGVQPTLRWLRRLVETLNDAGERLQRLTNPLRLPPLTAFSLDGMSAPSSVPWFARTADMESYSMKRAFVFGDATHTVGMVKFLRDELGMQIVGAGTYLEHEADWVRGELQDYLPADETGSIDTSFLVTEVFQDVARRIADLTPELVCGTQMERHACRKLDLPCMVIAPPTHIENHLLSYRPVLGFDGADVLADTVYTTATLGMEKHLIDMFGDAGLEYEEPRTERREAEFGNQKVETGEPGTGAPVIAHADSNGGVAGSSSTLAAQTVTASPRLVTPVWAPEAQAMLKKVPFFVRGRVQKNVERYAAQHGYATITAEILVEAKEALGG
>NC_009767.1|WP_012120057.1|1959148_1960393_+|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N
MSATVIREDGAYHSFCGLTCVGWLYQKIKDSFFLVLGTHTCAHLLQNVLGVMVFARPRFGVALIEEADLSKQQPELNAIIDEIVADHHPSVIFLLSSCTPEVMKVEFDGLARAVSRPNLPVLFVPASGLDYTFSQAEDSVLQALLPFCPVAPADDRRVVFLGSVNDAIADDFHTEAARLGIPVAGFLPESHFRDLPPIGPGTVVAPLQPYLAKVAGRLARERGATVMTSLFPFGPDGTRAFWEDLAAAMGKAVDLSERERQAWERLEPHLEILRGKKVFFTADNLMELPLARFLRNAGCIILECSSPYINRKFHARELAALDGVRVVEQPNFDRQLRDIRALRPDLVISTLATTNPLVGHGVVAKWSTEFSFMPIQGWSGAATLAGMFTRPLKRHAQLDPLMDDPLWVAGLMPG
>NC_009767.1|WP_012120067.1|1985595_1986717_-|3-isopropylmalate-dehydrogenase
MHAVITALPGDGIGPEVVAEGMRVLRAVGTRFGHTFEIREALIGGCAIDATGTALPDETLHLCRESDAVLLGAVGGPKWDNPEAPVRPEQGLLGIRKALGLFANLRPVTLHPRLIAASPLRPERLQGVDLLVVRELTGGIYFGEKGRDTTMDGGESAYDECVYTSAEIERIVRVAATLARNRRKKLTSVDKANVLETSRLWRSVTTRLMRAEFPDVQIEHMLVDACAMHLIRRPMDFDVIVTENMFGDILTDEASMLAGSMGMLPSASLGAPGNNGRGTQMGLYEPIHGSAPDIAGKGIANPLATILSVALLLRHSLGLEDEARAVETAVWRTLEEGIITGDIAMPGERSATTTEVGAAVAAWIEREEARSER
>NC_009767.1|WP_012120068.1|1987145_1987622_-|YqhA-family-protein
MTRLIGLVRYIILVAVLVTLVATTALILFGAIETYVVIRDIFSKGEFTSKVAKNLLLSFIEITDIFLLATVLYIVALGLYELFIDDRVPVPSWLEIHTLDDLKDKLIGVIIVVIGVGFLGQFTSWNGETNLLISGGGAALIIVALTFFLGQKSKKDKE
>NC_009767.1|WP_012120069.1|1987628_1988243_-|3-isopropylmalate-dehydratase-small-subunit
MHPISIITGRIVALPAHDIDTDQIIPARYLKVTDKSGLAEGLFYAWRFDAEGKPNPDFVLNRPEAQGATILVAGRNFGCGSSREHAPWALQGYGFKAVISPSFADIFRNNALKNGLLTVQTDEETWQQLVSLFEEDPTTEVIIDLATQTVTLPDGRQARFPIDPFTKHCLLQGIDQMGFLLNEEDAISAYESAHPPRVVTTARS
>NC_009767.1|WP_012120070.1|1988332_1989751_-|3-isopropylmalate-dehydratase-large-subunit
MPRTLFDKIWDTHIVRPQTAETPAVLYIDLHLIHEVTSPQAFTELRRRGLKVRRPDRTLATMDHSTPTTPRGPDGIIPVVDAQAAAQLRQLEQNCADFGIPLFALGSERQGIVHVIGPEQGLTQPGMTIVCGDSHTSTHGAFGALAFGIGTSEVAHVLATQCLIQNRPKTMEVRVDGRLKPGVTAKDIILAIIARYGVGAGVGHVFEYTGEAIRALSMEERMTICNMSIEGGARAGMIAPDDTTFQYIAGRPFAPKGAAWDEAVAYWRTLPTDDGAVYDRTITLDASQLTPMITYGTNPGMGIPIDGRIPTPEELPDQAARQALDKALRYMDLRPGQPLLGQKVDVVFLGSCTNSRISDLRMAASVLKGRKIAEGVRMMVVPGSQQVKKQAEAEGLDRIFREAGAEWREAGCSACLGMNDDKVPPGKYAVSTSNRNFEGRQGPGARTLLASPLTAVASAIEGVVADPRKYVG
>NC_009767.1|WP_012120071.1|1989929_1990859_-|branched-chain-amino-acid-transaminase
MPIRESKYIWFNGEMVAWEKATVHVMTHALHYGSSVFEGIRAYETPQGAAIFRLREHLRRLFDSCRIYRMELPFTPEQLFEACRAVVRDNGLTNAYIRPLVWRGYGEMGLNPLRSPVEVMVAAMEWGAYLGAEGLENGVDVHVSSWQRVAPNTLPAMAKAGGNYLSSQLIVMEAARNGYAEGIALDVHGWLSEGSGENLFLIRDGVIYTPPVTAALLPGITRDAVITLARQMGYEVREQNLPREMLYLADELFFTGTAAEVTPIRSVDKLPVGNGKRGPITTAIQKAFFGLFSGETEDRWGWLTPVAYS
>NC_009767.1|WP_012120072.1|1990916_1992527_-|citramalate-synthase
MQILLYDTTLRDGTQREGLSLSVEDKLKIARELDLLGVHYIEGGWPGSNPKDAEFFQRIRRADLRHARVAAFGSTRRADATCDTDANIQALVAAETPVVTLVGKSSTLHVEQVLETTRQENLAMIAESVAYFKERGKEVVYDAEHFFDGYKLDAAYALATLTAAAHAGADCLVLCDTNGGSLPHEVTEIVQAVQRRLANEGFSNGAAGRGPTLGIHTHNDGALAVANALAAVRAGCVHVQGTINGYGERCGNMDLIPLIANLQLKLGYRCITPEQLRRLTEVSHYVAAVANLNPDTHAPFVGHSAFAHKGGIHVAAVAKVPDSYQHIDPELVGNRMRVVVSELSGRGNVRMRAQELGLDLNGNERVVLQRIKELENRGFQFEAAEGSFEMLVRRAAPDYEPPFELLDFTVVVSKHGAGDIISQAMVKLKVGNEVMHTAAEGDGPVNALDKAIRKALLPHYPELADVQLVDYKVRIVDEHLGTAARPRVLIESARGEERWSTVGCSENIIEASFMALWDSLELPLARRRASCNAHRS
>NC_009767.1|WP_012120073.1|1992551_1993391_-|prephenate-dehydratase
MKRSIAYLGPPGSYSEIAALAYGGEDATYIPLTSMPAVVTAVETGAATVGILPIENVLEGSVTTTLDLLIHETDLRIAGETVIPIQHYLVGRAGLALHEIKVLYGHPQSLGQCRRFIERCLPGAATVASLSNSAAPAEALADERPAAAIGTLRAAQLVGAAVLASDIQDRSGNMTRFIALGKHDHPPTGDDKTSFCFGFDREDRPGVLVEALQELALVGINMTKLESRPSKEVLGQYIFLVDINGHREDPVVAAALERIRTKTGLFKVFGSYPRWRGQP
>NC_009767.1|WP_012120074.1|1993617_1995288_-|2-isopropylmalate-synthase
MEDHVRIFDTTLRDGEQAPGCTMTLEEKLEVARQLARLGVDIIEAGFPAASPGDWAAVHEIAKTVGTPDGPIIAALARANKDDIDKAWSAIQPAAKKRIHTFISSSDIHIEHQLRSTREEVLERARLMVRYARSLCDDVEFSPMDATRSDPEYVYRMLAAVVAEGATTLNIPDTVGYATPEEYAELIAGIYRHVPGADKVIISTHCHDDLGMAVANSLAGVRAGARQIECTINGIGERAGNASLEEVVMALKTRRSFFGVDTRINTRELARSSRLLSTIIGMPVPPNKAIVGANAFAHESGIHQDGVLKHRMTYEIMDATTIGLDGNAIVLGKHSGRNALRTKLAAMGYEFDSEEEFNQVFQRFKELCDKKKVVDDRDLEVLATGGSLHTPELYRLEHVQVTCGTGVTPVATVRITDPDGNTQTTAAHGTGPVDAIYKAIDKIVGRPNDLIEFSIKAVTEGIDAVAEVSVRIREPGDAVEEREYRVGRHRGPQIYSGYSANTDTIVAAAESYMAALNKMIAARQERLSAENVAYAAGYDRNRPTYAVDLFGKNATE
>NC_009767.1|WP_012120075.1|1995518_1995929_-|four-helix-bundle-protein
MRVESSVAMVKGYTHRNLILWNRAQQLALDVITIARRMPNTWSNAVIARQIIASATSIGANIAEGHGRYTPGAHRNHLAIAKGSTAETDRWLDLLRRSGYLSEEDEARLHSECQEIAAMLTSKTGACHPITHVNDS
>NC_009767.1|WP_012120076.1|1996236_1997259_-|ketol-acid-reductoisomerase
MANIYYENHADLARLAGRTIAVIGFGSQGHAHALNLKESGCDVIVGLYQGSKSWSKAEGLGLKVLPVAEAAKEAQIVMLALPDTAQAAIYRDAIGPHMTPGKTLMFAHGFNIRFGQIVPPEGVDVSMVAPKAPGHRVREVYTQGGGVPALVAVHQDASGNALADALAYARGLGCTRAGVIETTFAEETETDLFGEQVVLCGGVSALVKAAFETLVEAGYQPEVAYFECMHELKLIVDLFYQGGLNYMRYSVSDTAEWGDYTAGPKIITDETRATMKRILADIQSGAFAEDWIEENHNGRPRFNAYRTRDIAHPIEQVGRELRRMMPFVNPREVVPGEGGA

Crispr_ID: NC_009767_37

• CRISPR_ID: NC_009767_37
• CRISPR_location: 2062427-2062773
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_009767_37

Consensus_repeat	Method
GGGATTTCGGCGGCGGCCCGCAGGGCCTCCTGCAGCAGGTCGGGAT	PILER-CR

spacers of NC_009767_37

>37.1|2062473|56|NC_009767|PILER-CR
ATGGGTCCAGGTGGGGGGCCAGGTCGGCCAGGGCGCGGGCGCGGGCGTCGGCACGG
>37.2|2062575|55|NC_009767|PILER-CR
ATGGGTCCAGGTGGGGGCCAGGGCGGCCAAGACGAAGGCGCGGTTGTCGGCATCC
>37.3|2062676|72|NC_009767|PILER-CR
GCCTGGCGGCGCTTCGGCTCCTCCAGGTGGGGGTCCAGGTCGGCCAGGGCGCAGGCGCGCGAGAAAGCGTTC

CRISPR arrays and Neighbor proteins around NC_009767_37

CRISPR arrays

The CRISPR arrays of NC_009767_37

>merge|NC_009767|37|2062427-2062773|PILER-CR
CGGCGGCCCGCAGGGCCTCCTGCGGCAGGTCGGGATATGGGTCCAGGTGGGGGGCCAGGTCGGCCAGGGCGCGGGCGCGGGCGTCGGCACGGGGGATTTCGGCGGCGGCCCGCAGGGCCTCCTGCGGCAGGTCGGGATATGGGTCCAGGTGGGGGCCAGGGCGGCCAAGACGAAGGCGCGGTTGTCGGCATCCGGGATTTCGGCGGCGGCCCGCAGGGCCTCCTGCAGCGCCTGGCGGCGCTTCGGCTCCTCCAGGTGGGGGTCCAGGTCGGCCAGGGCGCAGGCGCGCGAGAAAGCGTTCGGGATTTCGGCGGCGGCCCGCAGGGCCTCCTGCAGCAGGTCGGGAT

>NC_009767|37|4|2062427-2062773|PILER-CR
CGGCGGCCCGCAGGGCCTCCTGCGGCAGGTCGGGATATGGGTCCAG	GTGGGGGGCCAGGTCGGCCAGGGCGCGGGCGCGGGCGTCGGCACGGGGGATTTCGG
CGGCGGCCCGCAGGGCCTCCTGCGGCAGGTCGGGATATGGGTCCAG	GTGGGGGCCAGGGCGGCCAAGACGAAGGCGCGGTTGTCGGCATCCGGGATTTCGG
CGGCGGCCCGCAGGGCCTCCTGCAGCGCCTGGCGGCGCTTCGGCTC	CTCCAGGTGGGGGTCCAGGTCGGCCAGGGCGCAGGCGCGCGAGAAAGCGTTCGGGATTTCGGCGGCGGCCCG
CAGGGCCTCCTGCAGCAGGTCGGGAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120115.1|2048735_2049515_+|sigma-factor-regulator-FecR	unknown	unknown	gnl|CDD|238703
NC_009767.1|WP_041330423.1|2055797_2059487_-|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl|CDD|234749
NC_009767.1|WP_012120125.1|2067226_2069791_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224400
NC_009767.1|WP_012120129.1|2077698_2081088_-|DUF3883-domain-containing-protein	unknown	unknown	gnl|CDD|350769
NC_009767.1|WP_012120127.1|2071068_2073798_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|274008
NC_009767.1|WP_012120114.1|2047942_2048689_+|NAD-dependent-deacylase	unknown	unknown	gnl|CDD|238703
NC_009767.1|WP_012120113.1|2046415_2047831_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|270916
NC_009767.1|WP_012120122.1|2063057_2066066_-|signal-transduction-protein	unknown	unknown	gnl|CDD|227922
NC_009767.1|WP_012120118.1|2051202_2055711_-|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl|CDD|234794
NC_009767.1|WP_012120131.1|2082193_2082835_-|hypothetical-protein	unknown	unknown	gnl|CDD|227645
NC_009767.1|WP_041330427.1|2061506_2062070_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120132.1|2082821_2083442_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120135.1|2085662_2086022_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042589.1|2059826_2060648_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120126.1|2069908_2071069_-|transcriptional-regulator	unknown	unknown	gnl|CDD|225420
NC_009767.1|WP_012120121.1|2060966_2061182_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330432.1|2084729_2085539_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120130.1|2081492_2082197_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl|CDD|378065
NC_009767.1|WP_012120116.1|2049536_2050157_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NC_009767.1|WP_041331858.1|2050254_2050800_+|hypothetical-protein	unknown	unknown	gnl|CDD|379721

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120115.1|2048735_2049515_+|sigma-factor-regulator-FecR	gnl|CDD|238703	cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity. .	3.0997e-94
NC_009767.1|WP_041330423.1|2055797_2059487_-|DNA-directed-RNA-polymerase-subunit-beta	gnl|CDD|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NC_009767.1|WP_012120131.1|2082193_2082835_-|hypothetical-protein	gnl|CDD|227645	COG5340, COG5340, Predicted transcriptional regulator [Transcription].	5.03867e-10
NC_009767.1|WP_012120114.1|2047942_2048689_+|NAD-dependent-deacylase	gnl|CDD|238703	cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity. .	6.0423e-117
NC_009767.1|WP_012120127.1|2071068_2073798_-|AAA-family-ATPase	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	9.97511e-10
NC_009767.1|WP_012120125.1|2067226_2069791_-|ATP-binding-protein	gnl|CDD|224400	COG1483, COG1483, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.71388e-36
NC_009767.1|WP_012120113.1|2046415_2047831_+|SH3-domain-containing-protein	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.87898e-54
NC_009767.1|WP_012120122.1|2063057_2066066_-|signal-transduction-protein	gnl|CDD|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	1.28323e-29
NC_009767.1|WP_012120118.1|2051202_2055711_-|DNA-directed-RNA-polymerase-subunit-beta'	gnl|CDD|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NC_009767.1|WP_012120126.1|2069908_2071069_-|transcriptional-regulator	gnl|CDD|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	1.60839e-68
NC_009767.1|WP_012120129.1|2077698_2081088_-|DUF3883-domain-containing-protein	gnl|CDD|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	8.79655e-66
NC_009767.1|WP_012120130.1|2081492_2082197_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl|CDD|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	4.03487e-21
NC_009767.1|WP_012120116.1|2049536_2050157_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	5.84825e-17
NC_009767.1|WP_041331858.1|2050254_2050800_+|hypothetical-protein	gnl|CDD|379721	pfam14907, NTP_transf_5, Uncharacterized nucleotidyltransferase. This family is likely to be an uncharacterized group of nucleotidyltransferases.	6.15044e-07

Protein sequences

>NC_009767.1|WP_041330427.1|2061506_2062070_-|hypothetical-protein
MAALAPHLDPYPDLPQEALRAAAEIPNAFWRARALAALDSHLDPYPDLMGEARQQVNSLLAPFPVRATLLALVAPFWPGLRRERDVWEALARAAASAAAEPWAWLPEALAGDATDKGLAGSSEALRAVEALARAGQSRAVAALLPLLREPPSEALTIAEAWLTDASPELARHAALYLAEVAGAAPAG
>NC_009767.1|WP_012120121.1|2060966_2061182_-|hypothetical-protein
MIPDFLTNLLASLVYDPLKVLRPRQHPPQPQDLERERRDELHRQTQALEALQTVLVRLSGERAVRIEVSAT
>NC_009767.1|WP_157042589.1|2059826_2060648_-|hypothetical-protein
MAAIAWALGWSVRSVAWMMRPFGSGLCQMTAWRDVPALAERGRWHVSKRRGRVGGRDGCGGSGERAVVAVGRESGAGAAREGDGTTRGLVADDVAIVTGSAQRRAFERQGCDVHRLRWVGRAWAGPAQAPGEGHPGAMEAVRRIVREPPPDGGPRRERSGERIRPLGQRKGPLEAGHRVRMGVVRLAEHRGRDTLLLRQAGVPHTNHRTAHAIGRWRVRSRSGRGFQRWAGGRQPAGEAPSRSPELRRTPLSNPMACANAPTAYGTDTARGVP
>NC_009767.1|WP_041330423.1|2055797_2059487_-|DNA-directed-RNA-polymerase-subunit-beta
MPPLTESVVLQPLIMPNDIGADSLHRSKIERYSFARISDAIELPKLIETQLKSFEWFRKEGLRELFDEISPITDFTGKNMELRFLDYHFGEPRYNEHECRERGITYSAPIRVNVQLRILSTGELKESEIFLGDFPLMTENGTFVINGAERVVVSQLIRSPGVYFKEEKDPTSGRSLHSAKLIPSRGAWLEFETNKRDVISVKVDRKRKIPVTILLRAVLGWKANPDGSGQWAPDTELDTRGRDEDVLELFTHVETGEHQYIRVTLDKDPARHAKEALLELYKRLRPGDPPTLDNARNLIEALLFNPRRYDLSRVGRYKLNKNLWEKDTRLEVRSQAPDLKVRVLLPDDIFKIVERIIQLNNETPGLRADDIDHLGNRRVRTVGELIQQQFRVGLLRMERVIKERMSLQDPETATPNALINIRPVVAAMREFFGGAQLSQFMDQTNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHHSHYGRICPVETPEGPNIGLIGTMSTYAQVNEMGFLETPYRKVYREVPNASEWERQGLLLRDVRDLRTGELIAVRGTRVDAAVARRIAVSLLRGQILREDIVDPKTGEVIASTGQEINRAIAERIVETPLRTIKIRPIVSQEVDYLSADEEDRFVIVQANAPLDEHNRFLEGTVSVRYAGDFDDVPIERVDYMDVSPKQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLRPDAPIVGTGMEYVAARDSGQVVVAKADGVVLSATGDEIIILEDDGNERSYRLRKFMRSNQDTCINQRPSVSRGQRVRKGDIIADSSSTDNGELALGQNVLVAFMPWEGGNFEDAILVSERLVREDIFTSIHIEKYEVEARDTKLGPEEITRDIPNVGQESLRNLDDRGIIYIGAEVQPNDILVGKITPKGETDLTAEERLLRAIFGEKAREVKDSSLRVPNGVRGKVIDVKVFTRNDDVELPVGVNQRVDVLLCQKRKISAGDKMAGRHGNKGVVSRILPIEDMPFLPDGTPVDIILNPIGVPSRMNIGQILETHLGWAAARLGYRVATPVFDGASETEIKEWLKRADLPPDGKITLYDGRTGEPFDHPVTVGYIYMMKLAHLVEDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVVGRVKTYEAIVKGEPIQEAGVPESFKVLIKELQSLGLSVEVLSADETPVELTDDVDSDLAALDGINLSGMERGEF
>NC_009767.1|WP_012120118.1|2051202_2055711_-|DNA-directed-RNA-polymerase-subunit-beta'
MLEINDFSAIRISLASPEDILSWSHGEVTKPETINYRTLKPERDGLFCERIFGPTKDWECYCGKYKRVRYKGVVCDKCGVEVTRSKVRRERMGHISLASPVSHIWFVKGTPSRLGLLLDISPRNLERVLYFASYIIVHVDEEVKAHRREALQAEYREKRERIQAEAESRQIELSTQLTQDLGGMESAQLSTQRRIEEEYRRLRDEISAEAERLRTDLEEKQGEAAEEDIIFRGTVLVEEGESITEKTLDALDELLDQELETLEQRKQRDLEDAEQLTGAERERKEYEASQERERLQERLQSELDRLVREEKERLEQLDSIKLKRILNEQEYRALREIAPGAFRADMGAGAIRDLIVRTVDLDKLAEELQNEVYTTQGQRRKKATKRLRVVEAFRKSGNRPEWMILTVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPEIIVRNEKRMLQEAVDALIDNGRRGRAVSGKGKHRLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLHQCGLPKKMALELFKPFVMRRLVEKGAAHNIKSAKRIVERVRPEVWDVLEEVIKDYLVLLNRAPSLHRLSIQAFEAKLIEGSAIQLHPLVCAAFNADFDGDQMAVHVPLSRKAQEEARMRMLSKYNLLSPATGDPIITPSQDIVLGCYYLTMVRDGAKGSGKMFASIDEALLAYDKGLVDIQAPIFVRMTGTLHGESDRPVRILNSDENGAPRMLLETTIGRIIFNNELLEPLRFRNRLIAKKGLREIIADCYKYYTNLNNLTEADLDTIRTMYGDRPRDDLARYFGSEMTASQADRIKTLGFKYATRGGMTIGVDDIEIPPKKQEILAEAEKRVAEVERQFRRGLITEEERYREIVEIWQNATKQTTEAVKQYLNPFGPVAMMVNSAARGNINQLSQMAGMRGLMSDPTGRIIELPIKSNFREGLSVLEYFVSTHGGRKGLADTALRTADAGYLTRRLIDVAQDNIVTIDDCGTDEGLWIYRSDDREVLQDFEQRILGRLLAAPLVDPRTGEVLADRNAEIDEALTRRCKELGIDAVYVRSPLACKADYGICRMCYGRNLATGKLVDIGEAVGIIAAQSIGEPGTQLTLRTFHTGGVASADDITQGLPRVQEIFEARTPKGKAILAEIDGIVELVREDEVRKIRVVSTDLYTDDHVLPPHYEPVVADGAQVNEGDVLAQSNRADLDSEPIVARLAGVVRIGAGQISVINEEREVREVIAPHTARLAAGIENGARVVAGQHLTEGSADPQELLALQGREAVQRYLVNEAQKVYRSQGVDINDKHIEVIVRQMLRRVRIEEPGDTDYLPGELIDSTEFVRRNAEIISQGGEPATASTMLLGITKASLTTDSFLAAASFQETTRVLTEAAITGKVDYLRGLKENVVIGKLIPAGTGIEKRRQLAEEVIGELANVVPTSTAVVEQERPEREADEALRRRLRALIGSDDNGDEVGKNGEFADETPFTGDSDDRDNEI
>NC_009767.1|WP_041331858.1|2050254_2050800_+|hypothetical-protein
MSLIAGNLGVVQRTLDAYQIAWAVCAGAAAHLYGNRRPIQDIDILIEPGRLPDVVRLLNQQQKVVQFDGQRILWRGIKIFDDLTIRRGREVYPFTLDADMRSRVRRLPLLGSLVPVLSPEDVALHKAVLARGPEEGKHDLADAVAIVRRQAFDYDYVQRRLALMRANGSATTVLARIGIEL
>NC_009767.1|WP_012120116.1|2049536_2050157_+|GNAT-family-N-acetyltransferase
MELRGPRVLIRPWKQHDDELADDWPPYNDPFDPLWNLPRPSSFSNGMWNALLDYGAYRRSWAVEHGGALIGRISLREIDERRGQARLGITFAAPYVGQGLGTEALTLFLDYYFETLRYHLIALDVAAPNVRAVRCYTRLGFQYIESDWRNAGALFDRRVLDQPVYAPLRRHFRDDARGLKVEFFEMRLYREEWMRRRTPTGAGHHG
>NC_009767.1|WP_012120115.1|2048735_2049515_+|sigma-factor-regulator-FecR
MSLTLPDDVIRRLSQSRRVVALTGGGVAAESGIPSFREAHTGLWAQYDVSELATPQAFVRNPRLVWEWYAYRRALAERAQPGASHYALVDLEQYYPEFTLITQSIDGLHWRAGSRDLIELNGSLRRCRCYESGHIAFAWDDDGEIPPRCVQCGSLLRPDVVMFGEGLPYHELRRARQVVEQCEVFLCVGTVGAIEPVASFPFVARRHGAFVLTIAPDESIYTLMADYVLSATPGAVMPELVQLIAGDVGGLEELHVDAI
>NC_009767.1|WP_012120114.1|2047942_2048689_+|NAD-dependent-deacylase
MQIPDSLIERMRTARRVAVLTGAGVSAESGVPTFRDAQTGLWARYDPAELASPDAFRANPNLVWQWYAYRRALVEAAAPNPGHLALADLERRIEDFTLITQNVDGLHRRAGSQNVVELHGNLFRYRCFHCAAPVELTIAPQDAPPPCPRCGGLVRPDVVWFGEWLPSQAWQTAVAAAERCELFLCIGTSGVVRPAADLPLIARSSGAYAVEINIAPGALDDRLDLHLYAPSGQLLPALMTAAFGDAAR
>NC_009767.1|WP_012120113.1|2046415_2047831_+|SH3-domain-containing-protein
MAQSPAPAAPLLHDRYRIDERLGATRLAVIYRAYDERLQRQVLVALFREELVSHEALRRRFIAEAQSGVRRLHPSLLSVYDSGAVAGRPFMVMEYVSGRTLRDLGPLTVEVALLYFRQIVGAVAVCQAVGAPHPPISSANIVVVEEGRVKLVENWSMTPSEFGADIAWYRAPERVAGHPPISGSVVYSLGLLLLEMLIGRRVNQGDDLNVMLQAHRHGALPTLAEMRPHLYIPSLAHLIARATASDPSQRFPDASALSQALDDVRRAISHSTSRLAPSASRPSASSGAVRGRSERASSSVNRPASMRPDPQPVDSMPPSDTMATAAHRLVMEKTRQHSLAALIAMVALFVLIGSGAYVLTSLVLEGLADIQLPRPQLTLPENVPLPDWLTGVANGSGEVLTVTIGDVEGLNLRDEPGLNTRVIALLPNGTRVRKLEGPRNVDNVPWVRVRGEINGRPVEGWVSQLYVRSDG
>NC_009767.1|WP_012120122.1|2063057_2066066_-|signal-transduction-protein
MISPNDLFTNLAASLAYDLLKAGAARLTTFVSGSPEEQTLRRCYQSAFAAMLSEVTASLDDAHQELVEYILRQFVIQPQVAEGLLALALKGADLPDLPRLRQHFDALGFDRATLPVDFDVALAAFTRGLTEALLDEAVRPGSPLYNRVSLGRVLALHALLQQQGKTLEEIRDAIRRLDAHGGATYNVIIARATGVAIGDGARVEAALPADVRDLLQQILQALKPPPDYTDADLLNAYLDWLIRQHSTLELRGIHRAGPSLAVPLERVYAALQAETVPPTEWQESYRLLEEDLQAWLEQQGLDDLAEAERRRYRWRFLAGHPLMPALEERDRPRLFSDRKAETLDLAQAVRRFRWLVILGDPGSGKTTLLRWLTLHLARALREGADRVRVPAMHVDAEADEDAPPVDLGPARLPVLVRIGDYAEARRATQARSEPPPSLLEFLGHHGWQRDFPTFGREHLRRGERLPADGLRRLIRDFFRRGQAMLLLDSLDEITAADDRREIIGAVESFLQEWITDPGGRSPLDPGALPWRDAGALSPDESGGNQIIITSRIAGYHAAPLSLHLTHATLQPMSDAAVDRFCQTWTLAVHRLLADPGDSEEEVARRAADEAQALQAALHDPTRPGLRELAGNPLLLTILAMVHHNSQARLPEQRVRLYQIAVENLVEVWRDTGLSEDEVVQVLAPLAAHIHERYPSGLIEENELREQVTHSLAEYRGENPDRPSPAFRRDVEAFLRAVRERVGLLSARGEAAYGFLHLTFQEYLAARHLAGDPNAALEAILARRDDPRWREPVLLALGYLSWSQNMAARGRLLRAFLEADDPLGDLLPRSALLMAAAIPEMTRTPPAIVEEVARRLLQACAARPVAWLRREVSAALARLHRREEASLLVERALVEALTAPPPPDAADPGPAAADLIREHKWFTPDLAEALVEALPRDLPGGLAHPPRPAGPGATGSPGPARRPPALPPRPAGRPRPGRTGGRRPRLAAPDPGPLRRTGREGLL
>NC_009767.1|WP_012120125.1|2067226_2069791_-|ATP-binding-protein
MTAFHTIAVPHDDILQGRLTLDVFAADLWEVYHRRGPEEYRDPDLFFQKTYLTDGLKNLFAVVEKRLKGQGGDPVIQMQTPFGGGKTHALIALYHKAREWGVKTAVIVGTPLAARETLWGLLAEQLTDSRARFEGFSAPGRESLRALLSAHQPLLILMDEVLEYAVKAAAEQVGGSTLAAQTLAFLQELTEAASILERVSLVITLPSSTLEQYDEQATRLFEQLKKISGRVEKVYTPVRDEEVGAILRRRLFSRVDEKAAAKIVNAFMDEAEQEALLPRGEESAAYRARFKATYPFLPEVVDVLYHRWGSFPNFQRTRGTLRLLGMVVHALKNSSRPYITLADFPLQEDEIRRELLKHIGNEYDSVLAADLLSAEAGARKANQEIGKAYQGLGLGERIASTIFMHSFVGGGGEAGATAAEVKRHNLMAGVPASVIAEVLNKLSSRLLFYLHEEGGRYYFSTTANLNRALTIRMENVTAEELRAAELDSLRKRVSGKVMRTFLWPEQSADIPDDPQPKLLILPAADPARMKHFVEEKGQTPRVHRNTLFFLTPHSERAPFENLLRRHLALSALLAVKTLSLTPEQRKELQDKEKQAARDLQEQIGSLYRLLYLPDPQGMALFDLGIPTYGGEQYLEERVYERLRTEGRLLEKLAPLVIKQRYLSNRDYVETRQLAESGSRTPGEPLVTGRHVWETCIAEGVRQGLFGLGELDENGQPQCRYFKEEVTPSLRSGEVLIRAEVCARQKTPESYTAPVVAPGTVSEPVGISTAVPTTSPVTGGVAVAPAAPGRNRLRIRFNLPFGKASSLFGLFNLLQTRFGKLHITIEAEGGSMSETEIEDKVRETFRQIGTDVEIE
>NC_009767.1|WP_012120126.1|2069908_2071069_-|transcriptional-regulator
MDVLELYQRIQRWEDLHTEFKEQDAHSDDIAAALVAFANTDGGQLIFGVSKDRVIIGVDDADRVMQRIDQIAYHNCEPPVTVIQETIPTEQGLAVVVNIPKGDQRPYRTQRGDYFIRTTSGRRRASRQELLRLFQSVESLYYDETLVLRASLSDLDYRRFTVFFEQSYQRLLQSEQEVENLLRNMRLVREQAGVWHPTLAGLLCFGREPQSFFPYAQVNAARIPGDSLATAPSDAKQIGGTLFDMLEDTARFLQIHLPSPHIIHGFAPEQRTEIPEEALRELLVNALVHRDYTVASPIRLLIFDRRIEIRTPGALPNTVTIEAILLGAAHVLRNPTIYTMFSRAGLVTSLGSGVLRAKELLEQHAHTTLELKVVANEFVVIITRPG
>NC_009767.1|WP_012120127.1|2071068_2073798_-|AAA-family-ATPase
MTEKSLYHGARWIRCDLHLHSPGAHGFTFPPGLSAAQRDEVVAQYVQQLQAQGIAIAAITDYQQIRTKWFIPIQQEAKKAGIYVYPGVELSFGGSVAGKYGLHVLAIFPYDSDLQEINRRIDKLLDGDVQEELVRENGSHRDLKPRENLADCLIRLRRETGCLLVFAHPNDENGLWKTYQPGEAADLLVRVEPDAIEQFEERDRQRLQDTGKVHPTLLGRIACVRSSDNHSIAEIGTKTLSEGAPRATYVKLSVLDDLRAIRLALHDHALLVRVGEPPKAEYTHFVHLEIEGNGFLGGLSLDFSPEMNVLIGGRGVGKSALLEVIRYALDLPAYAPTAYREGLVKHALGSGGKVVLAFYQVVRPGIERHYRIERVWDEQPRVFEGERSVSLSPLEVLGEREAPLFFGQREIYEVTQSARLRRRLLDEIIGRTAEMQLGQVKRITEELQRNARTILEHQERLAQRKDLEKRLQEIEHQIALYQQYGITQKLQQATALARDEERLKRAHEQLSQAQADWQEVQQRLAEHWTNALAGLKQADSVQAALLQQAAEVLRGLQDAFDGYLQQGEASFQQARAEFDRLLARWEQERRPLDEEIQRLKRELGTQSLDPDVLIRLTQEQEALRPQWETLRKIETTTANLQEERREKLADLREQRRQVFQLRQQQAQVISQALKDRVSVVVEYRGQRQEFAERLSAFFSGSGLDKESLRRLAEKGTDGIALAEWVRQGEKALCQNADLTSARAQQMLRFLEQNPQRIYELEVLAPEDEVEVQLKVNDLWLPLEKLSAGQRATAMLLILLTQHDRLLLIDQPEDDLDNRFIFDDVVPLLREQKGKRQIIAATHNPNIPVLGHAELVVALEAQEEHAAVAIQGAIDRKTVQDVVRRVMEGGEEAFRRRAEKYGLNIQGGSG
>NC_009767.1|WP_012120129.1|2077698_2081088_-|DUF3883-domain-containing-protein
MDMLIRPGDIVQASRWPEPLKVDLVEPFGDDYVRLVGVLMNARTHIDQVLPLQEVAQLRPLRLDGQFHASPRQVFLGLEARRYRYASLYDPLLAMNISKVDPLPHQIEAVYGYVLHQPRVRFLIADDPGAGKTIMAGLVIKEMKLRGLVRRILIVAPGHLRDQWQRELKERFDERFVLMDRQTMRNRFGENAWESEFQVITSLDFARQEDVMQALAGAHWDLTIVDEAHKMAAYKYGDKMEKTKRYRLGELLSRNSTQLLFLTATPHRGDPENFRLFLDLLQPGAFATVDMLDESIRAGDNPLFIRRLKEDLKDFEGKPLFLPRQVKTLTFDLGVESPAEKELYNALSRYVNEQYNKALASDRRRNVAFAMVILQRRLASSTYALYRSLERRKRRLEEMRQQANAFKEGRLSTPASAFSLDDVEDLSEEERWEQEAIWETLSGAENRAELEAELQTLEQLLQQARAIIEQENEVKLRHFRQALRTLQEQDPGAKILIFTESRDTLDYLERRMRDWGYRVCTIHGGMPLDARIEAEKTFKNEAQVMVATEAAGEGINLQFCHLMINYDIPWNPNRLEQRMGRIHRYGQTREVTIFNLVAADTREGRVLHRLFEKLDEIRSALGSDRVFDVIDELFPGRDLARLLADAAANARTLEDILREIEIQVDETYLRQVRDKLGESLATRYIDYTRIQEMNVRARERRLIPEYTQAFFQKAWEHLGGEMRPRAEVRRRGFFTLEKIPVPLRTLAEQDSFKKRFGNLQKRYPLVTFDKELAMKESQAEFVSFGHPLFEAVLEWAEQSLVEILVQGATFLDPDGRLDGVLLFYEGQINDGLGQVAGKRLFSLFIPHGNGRPQPMDPAILWDLAPAETPAAAESLDLEALKRQAQGWLLTHLESYRQELAAEREREAHIKRKYGVESLRYLILDLDNDLVHLQERAQAGEDVSLVMFNKEQQKNAYLQALKDLQETLERERQLTLETPRFLSAVRVLPLIAPAGGGTDEMHSDSAIEQAGMDLVLRYEREHGRQPQDVAAENLGYDVLSLELPGGTRRYIEVKARAGIGRVALTQNEWFTAHRLGEDYFLYVVMNAATAQPDLYIVRNPATRLAPEEQHEVRYLLPAEAIQSIAEREDL
>NC_009767.1|WP_012120130.1|2081492_2082197_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MKDYLAELVRAAPTLSEGRNRAREYLQACILGALQRAGAMIPLAFHGGTALRFLYASARYSEDLDFALEQEREHYDLRAYLRSVQSALAVEGYAVEFKVNDRKTVHSAFVRFPGLLYELGLSPQRGEVLAVKIEVDTAPPTGAGLETTLIRRHIPLRLQHHDRASLLAGKIHAILQRPFLKGRDLYDLLWYLSDPAWAQSHVDEILRDLERGSLDGTLDPFGVYLTCYRVLRAQ
>NC_009767.1|WP_012120131.1|2082193_2082835_-|hypothetical-protein
MKFDELLRIVGDEPVFETGLLLAGPTDPADVRRQLSRWVKAGSLYQVRRGLYALAPPYQKVKPHPFLVANRMVRGSYVSCQSALAHYGLIPEHVPVTVSVTAARPGQWETPLGVFAFHHLQPALLRGYRLLDLGGGQRAFVATPAKALLDLIYLYPGADSAAYLRELRLQNLESLDLAEVWRWAETLDRPKLKRAAAVLDELARADVEEYERL
>NC_009767.1|WP_012120132.1|2082821_2083442_-|hypothetical-protein
MDPNVVELAQKIGAFLLPLLPYLLKAGEEADKEAGKKFGGEAWEQAKALWGKLAPNERMHKAAEAAAALPENPAIQQGLAAEIARALEEDRDLQQEIARLWGEAQAAGVTVIAGGEHAVAIGGDVTGSVIVTGDRNTVQQGKYNIQIDQASGLAIGDGATVHRDAGQLQAVDLHHRRRTRRCNAPMMTWLHCNNLPSMVFYRYEIR
>NC_009767.1|WP_041330432.1|2084729_2085539_-|hypothetical-protein
MPLPRSATERLHNDDAHKRAIWRSPDGETRVIASIPDAITAIAGLTRGFDADIVGLGLHALLLTLHARRGYPSDAVRGAVIQAAETLRSVVPPQHAAVFDQALAIADSALLTGNDAIQALATFTTDAIARLDRAAERCGRRAAALLDEHDCLLILGDGAALRWMLHIAAGEGTTLKIADADCPHEATVCVVAGGCALMDGAIVGMHPSAIDAVAAARRRGMPVYALAPDGPTTAAAPGARLPAPLVSAIVTDRGVYRPERIAAYQHLPV
>NC_009767.1|WP_012120135.1|2085662_2086022_-|hypothetical-protein
MAQQTRTEPQVTALLAWLRRVALSLLFALAAGLIVFIVARGISGALLFIEHQELLRSATAALRNGIEGLPTADLHAARLRAEQSAEMHMRIGLILAFVTAALAAAGGYLWLEQRAARDA

Crispr_ID: NC_009767_38

• CRISPR_ID: NC_009767_38
• CRISPR_location: 2085534-2085638
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_38

Consensus_repeat	Method
CGGCATAGAAGGCTGTGTCTTTGCGCCTTTGTGTT	CRISPRCasFinder

spacers of NC_009767_38

>38.1|2085569|35|NC_009767|CRISPRCasFinder
CTGGCGCTCGATCTCGGCTCATCAACCGCGTACAG

CRISPR arrays and Neighbor proteins around NC_009767_38

CRISPR arrays

The CRISPR arrays of NC_009767_38

>merge|NC_009767|38|2085534-2085638|CRISPRCasFinder
CGGCATAGAAGGCTGTGTCTTTGCGCCTTTGTGTTCTGGCGCTCGATCTCGGCTCATCAACCGCGTACAGCGGCATAGAAGGCTGTGTCTTTGCGCCTTTGTGTT

>NC_009767|38|32|2085534-2085638|CRISPRCasFinder
CGGCATAGAAGGCTGTGTCTTTGCGCCTTTGTGTT	CTGGCGCTCGATCTCGGCTCATCAACCGCGTACAG
CGGCATAGAAGGCTGTGTCTTTGCGCCTTTGTGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120126.1|2069908_2071069_-|transcriptional-regulator	unknown	unknown	gnl|CDD|225420
NC_009767.1|WP_012120125.1|2067226_2069791_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224400
NC_009767.1|WP_012120131.1|2082193_2082835_-|hypothetical-protein	unknown	unknown	gnl|CDD|227645
NC_009767.1|WP_012120136.1|2085999_2086590_-|NUDIX-hydrolase	unknown	unknown	gnl|CDD|239217
NC_009767.1|WP_012120129.1|2077698_2081088_-|DUF3883-domain-containing-protein	unknown	unknown	gnl|CDD|350769
NC_009767.1|WP_012120141.1|2094692_2096213_+|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl|CDD|226465
NC_009767.1|WP_012120127.1|2071068_2073798_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|274008
NC_009767.1|WP_041330440.1|2096247_2096448_+|DUF951-domain-containing-protein	unknown	unknown	gnl|CDD|377606
NC_009767.1|WP_012120138.1|2089443_2091711_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120122.1|2063057_2066066_-|signal-transduction-protein	unknown	unknown	gnl|CDD|227922
NC_009767.1|WP_012120137.1|2086593_2088651_-|serine-carboxypeptidase	unknown	unknown	gnl|CDD|227632
NC_009767.1|WP_041330427.1|2061506_2062070_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120132.1|2082821_2083442_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120144.1|2097952_2098798_+|membrane-protein	unknown	unknown	gnl|CDD|259808
NC_009767.1|WP_012120140.1|2093682_2094696_+|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl|CDD|234605
NC_009767.1|WP_012120121.1|2060966_2061182_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120143.1|2096542_2097937_+|nodulation-protein-NfeD	unknown	unknown	gnl|CDD|223961
NC_009767.1|WP_012120135.1|2085662_2086022_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120130.1|2081492_2082197_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl|CDD|378065
NC_009767.1|WP_041330438.1|2091829_2093638_+|elongation-factor-4	unknown	unknown	gnl|CDD|235462

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120126.1|2069908_2071069_-|transcriptional-regulator	gnl|CDD|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	1.60839e-68
NC_009767.1|WP_012120125.1|2067226_2069791_-|ATP-binding-protein	gnl|CDD|224400	COG1483, COG1483, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.71388e-36
NC_009767.1|WP_012120131.1|2082193_2082835_-|hypothetical-protein	gnl|CDD|227645	COG5340, COG5340, Predicted transcriptional regulator [Transcription].	5.03867e-10
NC_009767.1|WP_012120136.1|2085999_2086590_-|NUDIX-hydrolase	gnl|CDD|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	3.38905e-11
NC_009767.1|WP_012120129.1|2077698_2081088_-|DUF3883-domain-containing-protein	gnl|CDD|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	8.79655e-66
NC_009767.1|WP_012120141.1|2094692_2096213_+|nucleoside-triphosphate-pyrophosphohydrolase	gnl|CDD|226465	COG3956, COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only].	1.3137e-126
NC_009767.1|WP_012120127.1|2071068_2073798_-|AAA-family-ATPase	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	9.97511e-10
NC_009767.1|WP_012120122.1|2063057_2066066_-|signal-transduction-protein	gnl|CDD|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	1.28323e-29
NC_009767.1|WP_012120137.1|2086593_2088651_-|serine-carboxypeptidase	gnl|CDD|227632	COG5322, COG5322, Predicted dehydrogenase [General function prediction only].	1.33166e-38
NC_009767.1|WP_041330440.1|2096247_2096448_+|DUF951-domain-containing-protein	gnl|CDD|377606	pfam06107, DUF951, Bacterial protein of unknown function (DUF951). This family consists of several short hypothetical bacterial proteins of unknown function. Structural modelling suggests this domain may bind nucleic acids.	1.67218e-25
NC_009767.1|WP_012120140.1|2093682_2094696_+|peptidyl-prolyl-cis-trans-isomerase	gnl|CDD|234605	PRK00059, prsA, peptidylprolyl isomerase; Provisional.	3.46193e-32
NC_009767.1|WP_012120144.1|2097952_2098798_+|membrane-protein	gnl|CDD|259808	cd08826, SPFH_eoslipins_u1, Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes a subgroup of the stomatin-like protein family (SLPs or slipins) that is found in bacteria and archaebacteria. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Bacterial and archaebacterial SLPs remain uncharacterized. This subgroup contains PH1511 from the hyperthermophilic archaeon Pyrococcus horikoshi.	7.39356e-109
NC_009767.1|WP_041330438.1|2091829_2093638_+|elongation-factor-4	gnl|CDD|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_009767.1|WP_012120143.1|2096542_2097937_+|nodulation-protein-NfeD	gnl|CDD|223961	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones].	3.59454e-65
NC_009767.1|WP_012120130.1|2081492_2082197_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl|CDD|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	4.03487e-21

Protein sequences

>NC_009767.1|WP_012120132.1|2082821_2083442_-|hypothetical-protein
MDPNVVELAQKIGAFLLPLLPYLLKAGEEADKEAGKKFGGEAWEQAKALWGKLAPNERMHKAAEAAAALPENPAIQQGLAAEIARALEEDRDLQQEIARLWGEAQAAGVTVIAGGEHAVAIGGDVTGSVIVTGDRNTVQQGKYNIQIDQASGLAIGDGATVHRDAGQLQAVDLHHRRRTRRCNAPMMTWLHCNNLPSMVFYRYEIR
>NC_009767.1|WP_012120131.1|2082193_2082835_-|hypothetical-protein
MKFDELLRIVGDEPVFETGLLLAGPTDPADVRRQLSRWVKAGSLYQVRRGLYALAPPYQKVKPHPFLVANRMVRGSYVSCQSALAHYGLIPEHVPVTVSVTAARPGQWETPLGVFAFHHLQPALLRGYRLLDLGGGQRAFVATPAKALLDLIYLYPGADSAAYLRELRLQNLESLDLAEVWRWAETLDRPKLKRAAAVLDELARADVEEYERL
>NC_009767.1|WP_012120130.1|2081492_2082197_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MKDYLAELVRAAPTLSEGRNRAREYLQACILGALQRAGAMIPLAFHGGTALRFLYASARYSEDLDFALEQEREHYDLRAYLRSVQSALAVEGYAVEFKVNDRKTVHSAFVRFPGLLYELGLSPQRGEVLAVKIEVDTAPPTGAGLETTLIRRHIPLRLQHHDRASLLAGKIHAILQRPFLKGRDLYDLLWYLSDPAWAQSHVDEILRDLERGSLDGTLDPFGVYLTCYRVLRAQ
>NC_009767.1|WP_012120129.1|2077698_2081088_-|DUF3883-domain-containing-protein
MDMLIRPGDIVQASRWPEPLKVDLVEPFGDDYVRLVGVLMNARTHIDQVLPLQEVAQLRPLRLDGQFHASPRQVFLGLEARRYRYASLYDPLLAMNISKVDPLPHQIEAVYGYVLHQPRVRFLIADDPGAGKTIMAGLVIKEMKLRGLVRRILIVAPGHLRDQWQRELKERFDERFVLMDRQTMRNRFGENAWESEFQVITSLDFARQEDVMQALAGAHWDLTIVDEAHKMAAYKYGDKMEKTKRYRLGELLSRNSTQLLFLTATPHRGDPENFRLFLDLLQPGAFATVDMLDESIRAGDNPLFIRRLKEDLKDFEGKPLFLPRQVKTLTFDLGVESPAEKELYNALSRYVNEQYNKALASDRRRNVAFAMVILQRRLASSTYALYRSLERRKRRLEEMRQQANAFKEGRLSTPASAFSLDDVEDLSEEERWEQEAIWETLSGAENRAELEAELQTLEQLLQQARAIIEQENEVKLRHFRQALRTLQEQDPGAKILIFTESRDTLDYLERRMRDWGYRVCTIHGGMPLDARIEAEKTFKNEAQVMVATEAAGEGINLQFCHLMINYDIPWNPNRLEQRMGRIHRYGQTREVTIFNLVAADTREGRVLHRLFEKLDEIRSALGSDRVFDVIDELFPGRDLARLLADAAANARTLEDILREIEIQVDETYLRQVRDKLGESLATRYIDYTRIQEMNVRARERRLIPEYTQAFFQKAWEHLGGEMRPRAEVRRRGFFTLEKIPVPLRTLAEQDSFKKRFGNLQKRYPLVTFDKELAMKESQAEFVSFGHPLFEAVLEWAEQSLVEILVQGATFLDPDGRLDGVLLFYEGQINDGLGQVAGKRLFSLFIPHGNGRPQPMDPAILWDLAPAETPAAAESLDLEALKRQAQGWLLTHLESYRQELAAEREREAHIKRKYGVESLRYLILDLDNDLVHLQERAQAGEDVSLVMFNKEQQKNAYLQALKDLQETLERERQLTLETPRFLSAVRVLPLIAPAGGGTDEMHSDSAIEQAGMDLVLRYEREHGRQPQDVAAENLGYDVLSLELPGGTRRYIEVKARAGIGRVALTQNEWFTAHRLGEDYFLYVVMNAATAQPDLYIVRNPATRLAPEEQHEVRYLLPAEAIQSIAEREDL
>NC_009767.1|WP_012120127.1|2071068_2073798_-|AAA-family-ATPase
MTEKSLYHGARWIRCDLHLHSPGAHGFTFPPGLSAAQRDEVVAQYVQQLQAQGIAIAAITDYQQIRTKWFIPIQQEAKKAGIYVYPGVELSFGGSVAGKYGLHVLAIFPYDSDLQEINRRIDKLLDGDVQEELVRENGSHRDLKPRENLADCLIRLRRETGCLLVFAHPNDENGLWKTYQPGEAADLLVRVEPDAIEQFEERDRQRLQDTGKVHPTLLGRIACVRSSDNHSIAEIGTKTLSEGAPRATYVKLSVLDDLRAIRLALHDHALLVRVGEPPKAEYTHFVHLEIEGNGFLGGLSLDFSPEMNVLIGGRGVGKSALLEVIRYALDLPAYAPTAYREGLVKHALGSGGKVVLAFYQVVRPGIERHYRIERVWDEQPRVFEGERSVSLSPLEVLGEREAPLFFGQREIYEVTQSARLRRRLLDEIIGRTAEMQLGQVKRITEELQRNARTILEHQERLAQRKDLEKRLQEIEHQIALYQQYGITQKLQQATALARDEERLKRAHEQLSQAQADWQEVQQRLAEHWTNALAGLKQADSVQAALLQQAAEVLRGLQDAFDGYLQQGEASFQQARAEFDRLLARWEQERRPLDEEIQRLKRELGTQSLDPDVLIRLTQEQEALRPQWETLRKIETTTANLQEERREKLADLREQRRQVFQLRQQQAQVISQALKDRVSVVVEYRGQRQEFAERLSAFFSGSGLDKESLRRLAEKGTDGIALAEWVRQGEKALCQNADLTSARAQQMLRFLEQNPQRIYELEVLAPEDEVEVQLKVNDLWLPLEKLSAGQRATAMLLILLTQHDRLLLIDQPEDDLDNRFIFDDVVPLLREQKGKRQIIAATHNPNIPVLGHAELVVALEAQEEHAAVAIQGAIDRKTVQDVVRRVMEGGEEAFRRRAEKYGLNIQGGSG
>NC_009767.1|WP_012120126.1|2069908_2071069_-|transcriptional-regulator
MDVLELYQRIQRWEDLHTEFKEQDAHSDDIAAALVAFANTDGGQLIFGVSKDRVIIGVDDADRVMQRIDQIAYHNCEPPVTVIQETIPTEQGLAVVVNIPKGDQRPYRTQRGDYFIRTTSGRRRASRQELLRLFQSVESLYYDETLVLRASLSDLDYRRFTVFFEQSYQRLLQSEQEVENLLRNMRLVREQAGVWHPTLAGLLCFGREPQSFFPYAQVNAARIPGDSLATAPSDAKQIGGTLFDMLEDTARFLQIHLPSPHIIHGFAPEQRTEIPEEALRELLVNALVHRDYTVASPIRLLIFDRRIEIRTPGALPNTVTIEAILLGAAHVLRNPTIYTMFSRAGLVTSLGSGVLRAKELLEQHAHTTLELKVVANEFVVIITRPG
>NC_009767.1|WP_012120125.1|2067226_2069791_-|ATP-binding-protein
MTAFHTIAVPHDDILQGRLTLDVFAADLWEVYHRRGPEEYRDPDLFFQKTYLTDGLKNLFAVVEKRLKGQGGDPVIQMQTPFGGGKTHALIALYHKAREWGVKTAVIVGTPLAARETLWGLLAEQLTDSRARFEGFSAPGRESLRALLSAHQPLLILMDEVLEYAVKAAAEQVGGSTLAAQTLAFLQELTEAASILERVSLVITLPSSTLEQYDEQATRLFEQLKKISGRVEKVYTPVRDEEVGAILRRRLFSRVDEKAAAKIVNAFMDEAEQEALLPRGEESAAYRARFKATYPFLPEVVDVLYHRWGSFPNFQRTRGTLRLLGMVVHALKNSSRPYITLADFPLQEDEIRRELLKHIGNEYDSVLAADLLSAEAGARKANQEIGKAYQGLGLGERIASTIFMHSFVGGGGEAGATAAEVKRHNLMAGVPASVIAEVLNKLSSRLLFYLHEEGGRYYFSTTANLNRALTIRMENVTAEELRAAELDSLRKRVSGKVMRTFLWPEQSADIPDDPQPKLLILPAADPARMKHFVEEKGQTPRVHRNTLFFLTPHSERAPFENLLRRHLALSALLAVKTLSLTPEQRKELQDKEKQAARDLQEQIGSLYRLLYLPDPQGMALFDLGIPTYGGEQYLEERVYERLRTEGRLLEKLAPLVIKQRYLSNRDYVETRQLAESGSRTPGEPLVTGRHVWETCIAEGVRQGLFGLGELDENGQPQCRYFKEEVTPSLRSGEVLIRAEVCARQKTPESYTAPVVAPGTVSEPVGISTAVPTTSPVTGGVAVAPAAPGRNRLRIRFNLPFGKASSLFGLFNLLQTRFGKLHITIEAEGGSMSETEIEDKVRETFRQIGTDVEIE
>NC_009767.1|WP_012120122.1|2063057_2066066_-|signal-transduction-protein
MISPNDLFTNLAASLAYDLLKAGAARLTTFVSGSPEEQTLRRCYQSAFAAMLSEVTASLDDAHQELVEYILRQFVIQPQVAEGLLALALKGADLPDLPRLRQHFDALGFDRATLPVDFDVALAAFTRGLTEALLDEAVRPGSPLYNRVSLGRVLALHALLQQQGKTLEEIRDAIRRLDAHGGATYNVIIARATGVAIGDGARVEAALPADVRDLLQQILQALKPPPDYTDADLLNAYLDWLIRQHSTLELRGIHRAGPSLAVPLERVYAALQAETVPPTEWQESYRLLEEDLQAWLEQQGLDDLAEAERRRYRWRFLAGHPLMPALEERDRPRLFSDRKAETLDLAQAVRRFRWLVILGDPGSGKTTLLRWLTLHLARALREGADRVRVPAMHVDAEADEDAPPVDLGPARLPVLVRIGDYAEARRATQARSEPPPSLLEFLGHHGWQRDFPTFGREHLRRGERLPADGLRRLIRDFFRRGQAMLLLDSLDEITAADDRREIIGAVESFLQEWITDPGGRSPLDPGALPWRDAGALSPDESGGNQIIITSRIAGYHAAPLSLHLTHATLQPMSDAAVDRFCQTWTLAVHRLLADPGDSEEEVARRAADEAQALQAALHDPTRPGLRELAGNPLLLTILAMVHHNSQARLPEQRVRLYQIAVENLVEVWRDTGLSEDEVVQVLAPLAAHIHERYPSGLIEENELREQVTHSLAEYRGENPDRPSPAFRRDVEAFLRAVRERVGLLSARGEAAYGFLHLTFQEYLAARHLAGDPNAALEAILARRDDPRWREPVLLALGYLSWSQNMAARGRLLRAFLEADDPLGDLLPRSALLMAAAIPEMTRTPPAIVEEVARRLLQACAARPVAWLRREVSAALARLHRREEASLLVERALVEALTAPPPPDAADPGPAAADLIREHKWFTPDLAEALVEALPRDLPGGLAHPPRPAGPGATGSPGPARRPPALPPRPAGRPRPGRTGGRRPRLAAPDPGPLRRTGREGLL
>NC_009767.1|WP_041330427.1|2061506_2062070_-|hypothetical-protein
MAALAPHLDPYPDLPQEALRAAAEIPNAFWRARALAALDSHLDPYPDLMGEARQQVNSLLAPFPVRATLLALVAPFWPGLRRERDVWEALARAAASAAAEPWAWLPEALAGDATDKGLAGSSEALRAVEALARAGQSRAVAALLPLLREPPSEALTIAEAWLTDASPELARHAALYLAEVAGAAPAG
>NC_009767.1|WP_012120121.1|2060966_2061182_-|hypothetical-protein
MIPDFLTNLLASLVYDPLKVLRPRQHPPQPQDLERERRDELHRQTQALEALQTVLVRLSGERAVRIEVSAT
>NC_009767.1|WP_012120135.1|2085662_2086022_-|hypothetical-protein
MAQQTRTEPQVTALLAWLRRVALSLLFALAAGLIVFIVARGISGALLFIEHQELLRSATAALRNGIEGLPTADLHAARLRAEQSAEMHMRIGLILAFVTAALAAAGGYLWLEQRAARDA
>NC_009767.1|WP_012120136.1|2085999_2086590_-|NUDIX-hydrolase
MPLAPIIETEIAALATRYGAPRRIIAMIDGNPFDPVAQSDRYGEVCMVVQRRNGRLLTAIKTFYPAGCFRLLTGGVEHGETIEAALHREVAEETGLHTVIRRFLAVVEYPPYAFATFAFLLDECGGKLGSRDPHERIGAFRDIDAHELPALAATLEAAPDRFDDEIGGNWRDWGRFRAIIHRVVYEVLTHGAADKD
>NC_009767.1|WP_012120137.1|2086593_2088651_-|serine-carboxypeptidase
MKRIVSISLGSARRDYQFVTTVLGQQIEVRRIGANGDTALAASLVRDFDGKVDAIGLGGLTPVFHVGAARYPHHEALTIAREARRTPVVAGNLIKQTLDRWCVQQANQAQRGMFNYRRILVTSGIDRYALAQALAQYDAELRFADPVVHSGLPFLPLPRSIPQLDMYAATTLPIAALLPYRVLHPVALGSEGHDARAEKHFAWADVIAGDFAYIRRFAPRDLNNKVIVTDDPSPEEIEDLRARGVRTLVTLSPRLESADKTHRPFVAADVLEAIVVAILESGPTPTEGDIINFIDEADWEPEVMTLSDTAEKPRFAFVIHPLSPKYIANHPRFRFTRYLPERLVERVAAHFPPMYISKIRGIRSQATGEEIEGLLFTLGATPRELMRRDTAFTYRRLIKCARMAERMGAKIMGLGAFTSVVGDAGITVAQKSDIGITSGNSLTVAATLEAAKQAVIKMGATDLTRGKAMVVGATGSIGSVCARLLAQAIGDVVLVAPRVERLLALKKQIEAETPGARVTAATSADAYLAECDLIVTTTSALSGRVINVDKLKPGAVVCDVARPPDVKKEDAARRPDVLVIESGEILLPGEPDFGFDIGLPPGTAYACLSETALLTMEHMYGDYTLGRNIDIEKVKEMYRLMKKHGLQLAGLRSFDEYITDEMIAEKRRLADERRRQLGMPVAATR
>NC_009767.1|WP_012120138.1|2089443_2091711_-|hypothetical-protein
MRIPTLSASFGAEATLLLTTLRDGALWRMLVLFALLLTLAAQLPLHYAIDVGREDGIGSDLPLVRGMFPPEEAAVGLFRWTTERAVVRLPGVGQRSLAATIRVLAVNDEVATRGARELELWSFDQRLALLPVRPAGAIYHLLIPPPADWSGDYQFEIRSATVTPTGDRRAVGTPLTTVTVFAGAGPALPPWRSILGWFGAGLALWVALRRSGFDPKTTQALMMPLLALAATGAWLDPPRFAFGAMPALIALTIGWALVMLLRAAPQALRLTGLALLVISVALWLIDWRGPTLDLGWANIHLRAVAGLVALASLAAAAIRPACASIAARLGIAVPASHWRWLLLIVVVVFATRYGGKIYPDSMPGDIGFHANRFVDVASGRVFLVSRNRGVDFPYPPAFYLILAPFTLLDIDRRALLHLGAALLDAISPLLVYTLAAALHRRRGNGSAYCASDCSFSTPLVAAALYGLAPAGYLTTWWNFSTHIFTQFAHLLLMTILVVAWKPARSEDALSAHHLPLHQRRRTILFVTLVVVQILVYLGHFGFWMNMSLLGGFGLATLAVLALRRRHGALQALAFYGAAFVTAQIVTTLFFYSAYATMFAQQLATATTGGLTGLAGRAPAPFEVLWRTLWDAGLRQHYGFFPLALIPAGITWLMNGAATQPDRRRVTAVVLALGTIIVAGGFAALPFFSGSTLSTRWLMFSAWLVAVGAAAGAAMLWRQGWAGRITTLAAGGYVVWVTASMWLAALLWRIRPPEPF
>NC_009767.1|WP_041330438.1|2091829_2093638_+|elongation-factor-4
MVDQQHIRNFSIIAHIDHGKTTLSDRLLEMTGTISERERREQLLDAMDLERERGITIKSKAVRMHYTARDGQTYQFNLIDTPGHVDFGFEVGRALAAGEGAILVVDASQGIEAQTLANVYLALENDLTIIPVLNKIDLPGADPDHVAMEIEQVLGLPAEDVLRVSAKQGVGIDALLEAIVERIPPPHGQHDRPLRALIFDSHYDPYKGVIAYVRIVDGALPVGARLRMLGTGAEADALEVGAFRPQMTPLDLLDTGEVGYVATGLKQIGECQVGDTITLASMPAEIALPGYRPAKPMVFAGLYPVDTNAYTDLRDALEKLKLNDAALSFVPEKSAALGFGFRCGFLGLLHMEIVRERLEREYGLDLLITAPSVEYQVLLSNGDVITVDNPADMPDAGRIESIEEPIMLITIITPTRYIGSIMELVTGKRGVFESMEHLDPQRVALKYKIPLSEIVVDFYDQLKSRTQGYASLDYTLAGYQPADLVKLDILVNGQPVDALSLIVHRDFAYAQGRALVERLRKLIPRQMFEVPIQAAIGSKVIARETIRAMRKDVLAKCYGGDVTRKRKLLEKQKEGKKRMKMVGSVEIPQEAFMAVLSLNADT
>NC_009767.1|WP_012120140.1|2093682_2094696_+|peptidyl-prolyl-cis-trans-isomerase
MNLKHAIAAVLVVLSLAACGAGSQTVARVDNVTLTRQELDQRIDRIEKGLQQQAGTGFPLPSRLDIEQELVSQFIDQQLTLGLARQRGITVSDADVNEQIERFRQQIQTGSGISLEQAIQEQLGLPGESSPEFRLFVTYFLARQKLGETLVSEVDIRQRISDEVMADTQRMVDVATVAHILVATEDEAKQVIERLDKGEDFADLAKELSQDPGSAENGGVYENIQRGQFVPEFDKAMFEDLQPGETTKTPVQTQFGWHVIRLVSRGEAPALDPANAPAVIEQRVAQELPFEQQSALERLLQSEKQKAIQEQRLVEPTFPTPTPEPLPTIAPLPTPAP
>NC_009767.1|WP_012120141.1|2094692_2096213_+|nucleoside-triphosphate-pyrophosphohydrolase
MITLVGLGPGDPGLITRAAWEMISAARVLYLRTAVHPTVAALPPSVVVRAFDDLYEQAERFDEVYERIADELIARARGGEAVVYATPGDPLTAEATSRHLLRRARAQGVPARVVPGVSFVEPVCALLGVDPLEHGLQLLDALDLMVGDTTVDAPSWASLHGFTYTPPLLPFPLTPTRPALICQVYSRSVASHVKLSLLERYPVDHLVTLVRAAGVVDAEAAVELPLHTLDHRNDFDHLTSLFVPPLTPLADLRGPDGVAYVVARLLGPGGCPWDREQTPQSLRASLLEEVHEALEALDAGNDEALVEELGDVLINVLMLSEMARQAERFDAGEVFNAVAGKLIRRHPHVFGELDVAASDQVLHNWEAIKRAEHATKGVSRQSALDGIPPSLPALAAAQKVVSKAARAGFDAPEIDHAWDALAEELAELRAVTTDPAQAEAELGDLLLAVARLGWRLDVDAESALRAAVARFRRRFARLETLLNGRDLRSLSIDEKLALWERARDDG
>NC_009767.1|WP_041330440.1|2096247_2096448_+|DUF951-domain-containing-protein
MPKPLLDIRVGDVVQMRKPHPCGGDTWQVVRIGAEIGIRCLTCHRKVMLLRSDFERRLKRIVERAT
>NC_009767.1|WP_012120143.1|2096542_2097937_+|nodulation-protein-NfeD
MPANCSSHQRSGMLIAALAIALLLLVWPAGSARAQQSGGPLYLIEVSGIVSAPTIDYLRRAVQIAEASSADALIISYSSTGGVLRDVRVFAAEVAQARVPIVVFITPRGTQAGPAGALFVTAAHISALSPDTSFGSPFPLAQVDDTLSQQTRDLLLDNVSSQMRKWNETRGRNAEWIDRAVREGVILNNQQAISLDPPAIDLVAADLRELLTLIDGRIVTLDDGRVVRISSIGRMPTPIEPTLFESLRLALTDPTVAFALLVLGSMAIYLELNTPGIGLFAGAGFLLLLGAAAGFLALPVLWWAMTLVILGLVLIGAEFVAPTHGGLMITGLVMLGIGGGNLIDATQAPGAGVAWWALLIVIGGIAATAALGLALALRSRKRPAAIGTEALVGRLAQVRRRLDPRGMVFVEGALWQAISETDPVEVGDWVRVVAVHNLQLIVRPLESEESTTREAQPPSTGRVV
>NC_009767.1|WP_012120144.1|2097952_2098798_+|membrane-protein
MGSGALFLCLGVLLFAVLMIGFSAVKIVPEYERGVVFRLGRLVGARGPGLFFLIPIIERMVRVDQRVITMDVPPQEVITLDNVTIKVNAVLYFMVVDPEKAIVKVMDYIRATMQIAQTTLRSVVGQVELDELLARRESINERLQRIIDEQTEPWGVKVTIVEVKDVELPQGMQRAMAKQAEAEREKRAKIIHADGELAASRMLAEAATVIASEPVTLQLRYLQTLTEIAVEKNSTIIFPLPVDTIKIFMDGLEQARRNGVAPVVRREDVSEQPREHDGQAA

Crispr_ID: NC_009767_39

• CRISPR_ID: NC_009767_39
• CRISPR_location: 2089322-2089417
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_39

Consensus_repeat	Method
CGTTCATATCCGTGTGCATCCGTGTGCCATCAG	CRISPRCasFinder

spacers of NC_009767_39

>39.1|2089355|30|NC_009767|CRISPRCasFinder
GAACAATTGGCAGCGATGAATCTTCCGTTA

CRISPR arrays and Neighbor proteins around NC_009767_39

CRISPR arrays

The CRISPR arrays of NC_009767_39

>merge|NC_009767|39|2089322-2089417|CRISPRCasFinder
CGTTCATATCCGTGTGCATCCGTGTGCCATCAGGAACAATTGGCAGCGATGAATCTTCCGTTACGTTCATATTCGTGTGCATCCGTGTGCCATCAG

>NC_009767|39|33|2089322-2089417|CRISPRCasFinder
CGTTCATATCCGTGTGCATCCGTGTGCCATCAG	GAACAATTGGCAGCGATGAATCTTCCGTTA
CGTTCATATTCGTGTGCATCCGTGTGCCATCAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120126.1|2069908_2071069_-|transcriptional-regulator	unknown	unknown	gnl|CDD|225420
NC_009767.1|WP_012120140.1|2093682_2094696_+|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl|CDD|234605
NC_009767.1|WP_012120131.1|2082193_2082835_-|hypothetical-protein	unknown	unknown	gnl|CDD|227645
NC_009767.1|WP_012120136.1|2085999_2086590_-|NUDIX-hydrolase	unknown	unknown	gnl|CDD|239217
NC_009767.1|WP_012120129.1|2077698_2081088_-|DUF3883-domain-containing-protein	unknown	unknown	gnl|CDD|350769
NC_009767.1|WP_012120141.1|2094692_2096213_+|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl|CDD|226465
NC_009767.1|WP_012120127.1|2071068_2073798_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|274008
NC_009767.1|WP_012120138.1|2089443_2091711_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120137.1|2086593_2088651_-|serine-carboxypeptidase	unknown	unknown	gnl|CDD|227632
NC_009767.1|WP_041330440.1|2096247_2096448_+|DUF951-domain-containing-protein	unknown	unknown	gnl|CDD|377606
NC_009767.1|WP_012120147.1|2100951_2102250_-|glycosyltransferase	unknown	unknown	gnl|CDD|274425
NC_009767.1|WP_012120132.1|2082821_2083442_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120135.1|2085662_2086022_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120144.1|2097952_2098798_+|membrane-protein	unknown	unknown	gnl|CDD|259808
NC_009767.1|WP_041330438.1|2091829_2093638_+|elongation-factor-4	unknown	unknown	gnl|CDD|235462
NC_009767.1|WP_012120143.1|2096542_2097937_+|nodulation-protein-NfeD	unknown	unknown	gnl|CDD|223961
NC_009767.1|WP_041330432.1|2084729_2085539_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120130.1|2081492_2082197_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl|CDD|378065
NC_009767.1|WP_012120145.1|2098785_2099568_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009767.1|WP_012120146.1|2099644_2100949_-|glycosyltransferase	unknown	unknown	gnl|CDD|274425

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120126.1|2069908_2071069_-|transcriptional-regulator	gnl|CDD|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	1.60839e-68
NC_009767.1|WP_012120131.1|2082193_2082835_-|hypothetical-protein	gnl|CDD|227645	COG5340, COG5340, Predicted transcriptional regulator [Transcription].	5.03867e-10
NC_009767.1|WP_012120136.1|2085999_2086590_-|NUDIX-hydrolase	gnl|CDD|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	3.38905e-11
NC_009767.1|WP_012120129.1|2077698_2081088_-|DUF3883-domain-containing-protein	gnl|CDD|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	8.79655e-66
NC_009767.1|WP_012120141.1|2094692_2096213_+|nucleoside-triphosphate-pyrophosphohydrolase	gnl|CDD|226465	COG3956, COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only].	1.3137e-126
NC_009767.1|WP_012120127.1|2071068_2073798_-|AAA-family-ATPase	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	9.97511e-10
NC_009767.1|WP_012120137.1|2086593_2088651_-|serine-carboxypeptidase	gnl|CDD|227632	COG5322, COG5322, Predicted dehydrogenase [General function prediction only].	1.33166e-38
NC_009767.1|WP_041330440.1|2096247_2096448_+|DUF951-domain-containing-protein	gnl|CDD|377606	pfam06107, DUF951, Bacterial protein of unknown function (DUF951). This family consists of several short hypothetical bacterial proteins of unknown function. Structural modelling suggests this domain may bind nucleic acids.	1.67218e-25
NC_009767.1|WP_012120147.1|2100951_2102250_-|glycosyltransferase	gnl|CDD|274425	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.	1.84287e-71
NC_009767.1|WP_012120140.1|2093682_2094696_+|peptidyl-prolyl-cis-trans-isomerase	gnl|CDD|234605	PRK00059, prsA, peptidylprolyl isomerase; Provisional.	3.46193e-32
NC_009767.1|WP_012120144.1|2097952_2098798_+|membrane-protein	gnl|CDD|259808	cd08826, SPFH_eoslipins_u1, Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes a subgroup of the stomatin-like protein family (SLPs or slipins) that is found in bacteria and archaebacteria. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Bacterial and archaebacterial SLPs remain uncharacterized. This subgroup contains PH1511 from the hyperthermophilic archaeon Pyrococcus horikoshi.	7.39356e-109
NC_009767.1|WP_041330438.1|2091829_2093638_+|elongation-factor-4	gnl|CDD|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_009767.1|WP_012120143.1|2096542_2097937_+|nodulation-protein-NfeD	gnl|CDD|223961	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones].	3.59454e-65
NC_009767.1|WP_012120130.1|2081492_2082197_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl|CDD|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	4.03487e-21
NC_009767.1|WP_012120145.1|2098785_2099568_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	5.21382e-08
NC_009767.1|WP_012120146.1|2099644_2100949_-|glycosyltransferase	gnl|CDD|274425	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.	9.33542e-55

Protein sequences

>NC_009767.1|WP_012120137.1|2086593_2088651_-|serine-carboxypeptidase
MKRIVSISLGSARRDYQFVTTVLGQQIEVRRIGANGDTALAASLVRDFDGKVDAIGLGGLTPVFHVGAARYPHHEALTIAREARRTPVVAGNLIKQTLDRWCVQQANQAQRGMFNYRRILVTSGIDRYALAQALAQYDAELRFADPVVHSGLPFLPLPRSIPQLDMYAATTLPIAALLPYRVLHPVALGSEGHDARAEKHFAWADVIAGDFAYIRRFAPRDLNNKVIVTDDPSPEEIEDLRARGVRTLVTLSPRLESADKTHRPFVAADVLEAIVVAILESGPTPTEGDIINFIDEADWEPEVMTLSDTAEKPRFAFVIHPLSPKYIANHPRFRFTRYLPERLVERVAAHFPPMYISKIRGIRSQATGEEIEGLLFTLGATPRELMRRDTAFTYRRLIKCARMAERMGAKIMGLGAFTSVVGDAGITVAQKSDIGITSGNSLTVAATLEAAKQAVIKMGATDLTRGKAMVVGATGSIGSVCARLLAQAIGDVVLVAPRVERLLALKKQIEAETPGARVTAATSADAYLAECDLIVTTTSALSGRVINVDKLKPGAVVCDVARPPDVKKEDAARRPDVLVIESGEILLPGEPDFGFDIGLPPGTAYACLSETALLTMEHMYGDYTLGRNIDIEKVKEMYRLMKKHGLQLAGLRSFDEYITDEMIAEKRRLADERRRQLGMPVAATR
>NC_009767.1|WP_012120136.1|2085999_2086590_-|NUDIX-hydrolase
MPLAPIIETEIAALATRYGAPRRIIAMIDGNPFDPVAQSDRYGEVCMVVQRRNGRLLTAIKTFYPAGCFRLLTGGVEHGETIEAALHREVAEETGLHTVIRRFLAVVEYPPYAFATFAFLLDECGGKLGSRDPHERIGAFRDIDAHELPALAATLEAAPDRFDDEIGGNWRDWGRFRAIIHRVVYEVLTHGAADKD
>NC_009767.1|WP_012120135.1|2085662_2086022_-|hypothetical-protein
MAQQTRTEPQVTALLAWLRRVALSLLFALAAGLIVFIVARGISGALLFIEHQELLRSATAALRNGIEGLPTADLHAARLRAEQSAEMHMRIGLILAFVTAALAAAGGYLWLEQRAARDA
>NC_009767.1|WP_041330432.1|2084729_2085539_-|hypothetical-protein
MPLPRSATERLHNDDAHKRAIWRSPDGETRVIASIPDAITAIAGLTRGFDADIVGLGLHALLLTLHARRGYPSDAVRGAVIQAAETLRSVVPPQHAAVFDQALAIADSALLTGNDAIQALATFTTDAIARLDRAAERCGRRAAALLDEHDCLLILGDGAALRWMLHIAAGEGTTLKIADADCPHEATVCVVAGGCALMDGAIVGMHPSAIDAVAAARRRGMPVYALAPDGPTTAAAPGARLPAPLVSAIVTDRGVYRPERIAAYQHLPV
>NC_009767.1|WP_012120132.1|2082821_2083442_-|hypothetical-protein
MDPNVVELAQKIGAFLLPLLPYLLKAGEEADKEAGKKFGGEAWEQAKALWGKLAPNERMHKAAEAAAALPENPAIQQGLAAEIARALEEDRDLQQEIARLWGEAQAAGVTVIAGGEHAVAIGGDVTGSVIVTGDRNTVQQGKYNIQIDQASGLAIGDGATVHRDAGQLQAVDLHHRRRTRRCNAPMMTWLHCNNLPSMVFYRYEIR
>NC_009767.1|WP_012120131.1|2082193_2082835_-|hypothetical-protein
MKFDELLRIVGDEPVFETGLLLAGPTDPADVRRQLSRWVKAGSLYQVRRGLYALAPPYQKVKPHPFLVANRMVRGSYVSCQSALAHYGLIPEHVPVTVSVTAARPGQWETPLGVFAFHHLQPALLRGYRLLDLGGGQRAFVATPAKALLDLIYLYPGADSAAYLRELRLQNLESLDLAEVWRWAETLDRPKLKRAAAVLDELARADVEEYERL
>NC_009767.1|WP_012120130.1|2081492_2082197_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MKDYLAELVRAAPTLSEGRNRAREYLQACILGALQRAGAMIPLAFHGGTALRFLYASARYSEDLDFALEQEREHYDLRAYLRSVQSALAVEGYAVEFKVNDRKTVHSAFVRFPGLLYELGLSPQRGEVLAVKIEVDTAPPTGAGLETTLIRRHIPLRLQHHDRASLLAGKIHAILQRPFLKGRDLYDLLWYLSDPAWAQSHVDEILRDLERGSLDGTLDPFGVYLTCYRVLRAQ
>NC_009767.1|WP_012120129.1|2077698_2081088_-|DUF3883-domain-containing-protein
MDMLIRPGDIVQASRWPEPLKVDLVEPFGDDYVRLVGVLMNARTHIDQVLPLQEVAQLRPLRLDGQFHASPRQVFLGLEARRYRYASLYDPLLAMNISKVDPLPHQIEAVYGYVLHQPRVRFLIADDPGAGKTIMAGLVIKEMKLRGLVRRILIVAPGHLRDQWQRELKERFDERFVLMDRQTMRNRFGENAWESEFQVITSLDFARQEDVMQALAGAHWDLTIVDEAHKMAAYKYGDKMEKTKRYRLGELLSRNSTQLLFLTATPHRGDPENFRLFLDLLQPGAFATVDMLDESIRAGDNPLFIRRLKEDLKDFEGKPLFLPRQVKTLTFDLGVESPAEKELYNALSRYVNEQYNKALASDRRRNVAFAMVILQRRLASSTYALYRSLERRKRRLEEMRQQANAFKEGRLSTPASAFSLDDVEDLSEEERWEQEAIWETLSGAENRAELEAELQTLEQLLQQARAIIEQENEVKLRHFRQALRTLQEQDPGAKILIFTESRDTLDYLERRMRDWGYRVCTIHGGMPLDARIEAEKTFKNEAQVMVATEAAGEGINLQFCHLMINYDIPWNPNRLEQRMGRIHRYGQTREVTIFNLVAADTREGRVLHRLFEKLDEIRSALGSDRVFDVIDELFPGRDLARLLADAAANARTLEDILREIEIQVDETYLRQVRDKLGESLATRYIDYTRIQEMNVRARERRLIPEYTQAFFQKAWEHLGGEMRPRAEVRRRGFFTLEKIPVPLRTLAEQDSFKKRFGNLQKRYPLVTFDKELAMKESQAEFVSFGHPLFEAVLEWAEQSLVEILVQGATFLDPDGRLDGVLLFYEGQINDGLGQVAGKRLFSLFIPHGNGRPQPMDPAILWDLAPAETPAAAESLDLEALKRQAQGWLLTHLESYRQELAAEREREAHIKRKYGVESLRYLILDLDNDLVHLQERAQAGEDVSLVMFNKEQQKNAYLQALKDLQETLERERQLTLETPRFLSAVRVLPLIAPAGGGTDEMHSDSAIEQAGMDLVLRYEREHGRQPQDVAAENLGYDVLSLELPGGTRRYIEVKARAGIGRVALTQNEWFTAHRLGEDYFLYVVMNAATAQPDLYIVRNPATRLAPEEQHEVRYLLPAEAIQSIAEREDL
>NC_009767.1|WP_012120127.1|2071068_2073798_-|AAA-family-ATPase
MTEKSLYHGARWIRCDLHLHSPGAHGFTFPPGLSAAQRDEVVAQYVQQLQAQGIAIAAITDYQQIRTKWFIPIQQEAKKAGIYVYPGVELSFGGSVAGKYGLHVLAIFPYDSDLQEINRRIDKLLDGDVQEELVRENGSHRDLKPRENLADCLIRLRRETGCLLVFAHPNDENGLWKTYQPGEAADLLVRVEPDAIEQFEERDRQRLQDTGKVHPTLLGRIACVRSSDNHSIAEIGTKTLSEGAPRATYVKLSVLDDLRAIRLALHDHALLVRVGEPPKAEYTHFVHLEIEGNGFLGGLSLDFSPEMNVLIGGRGVGKSALLEVIRYALDLPAYAPTAYREGLVKHALGSGGKVVLAFYQVVRPGIERHYRIERVWDEQPRVFEGERSVSLSPLEVLGEREAPLFFGQREIYEVTQSARLRRRLLDEIIGRTAEMQLGQVKRITEELQRNARTILEHQERLAQRKDLEKRLQEIEHQIALYQQYGITQKLQQATALARDEERLKRAHEQLSQAQADWQEVQQRLAEHWTNALAGLKQADSVQAALLQQAAEVLRGLQDAFDGYLQQGEASFQQARAEFDRLLARWEQERRPLDEEIQRLKRELGTQSLDPDVLIRLTQEQEALRPQWETLRKIETTTANLQEERREKLADLREQRRQVFQLRQQQAQVISQALKDRVSVVVEYRGQRQEFAERLSAFFSGSGLDKESLRRLAEKGTDGIALAEWVRQGEKALCQNADLTSARAQQMLRFLEQNPQRIYELEVLAPEDEVEVQLKVNDLWLPLEKLSAGQRATAMLLILLTQHDRLLLIDQPEDDLDNRFIFDDVVPLLREQKGKRQIIAATHNPNIPVLGHAELVVALEAQEEHAAVAIQGAIDRKTVQDVVRRVMEGGEEAFRRRAEKYGLNIQGGSG
>NC_009767.1|WP_012120126.1|2069908_2071069_-|transcriptional-regulator
MDVLELYQRIQRWEDLHTEFKEQDAHSDDIAAALVAFANTDGGQLIFGVSKDRVIIGVDDADRVMQRIDQIAYHNCEPPVTVIQETIPTEQGLAVVVNIPKGDQRPYRTQRGDYFIRTTSGRRRASRQELLRLFQSVESLYYDETLVLRASLSDLDYRRFTVFFEQSYQRLLQSEQEVENLLRNMRLVREQAGVWHPTLAGLLCFGREPQSFFPYAQVNAARIPGDSLATAPSDAKQIGGTLFDMLEDTARFLQIHLPSPHIIHGFAPEQRTEIPEEALRELLVNALVHRDYTVASPIRLLIFDRRIEIRTPGALPNTVTIEAILLGAAHVLRNPTIYTMFSRAGLVTSLGSGVLRAKELLEQHAHTTLELKVVANEFVVIITRPG
>NC_009767.1|WP_012120138.1|2089443_2091711_-|hypothetical-protein
MRIPTLSASFGAEATLLLTTLRDGALWRMLVLFALLLTLAAQLPLHYAIDVGREDGIGSDLPLVRGMFPPEEAAVGLFRWTTERAVVRLPGVGQRSLAATIRVLAVNDEVATRGARELELWSFDQRLALLPVRPAGAIYHLLIPPPADWSGDYQFEIRSATVTPTGDRRAVGTPLTTVTVFAGAGPALPPWRSILGWFGAGLALWVALRRSGFDPKTTQALMMPLLALAATGAWLDPPRFAFGAMPALIALTIGWALVMLLRAAPQALRLTGLALLVISVALWLIDWRGPTLDLGWANIHLRAVAGLVALASLAAAAIRPACASIAARLGIAVPASHWRWLLLIVVVVFATRYGGKIYPDSMPGDIGFHANRFVDVASGRVFLVSRNRGVDFPYPPAFYLILAPFTLLDIDRRALLHLGAALLDAISPLLVYTLAAALHRRRGNGSAYCASDCSFSTPLVAAALYGLAPAGYLTTWWNFSTHIFTQFAHLLLMTILVVAWKPARSEDALSAHHLPLHQRRRTILFVTLVVVQILVYLGHFGFWMNMSLLGGFGLATLAVLALRRRHGALQALAFYGAAFVTAQIVTTLFFYSAYATMFAQQLATATTGGLTGLAGRAPAPFEVLWRTLWDAGLRQHYGFFPLALIPAGITWLMNGAATQPDRRRVTAVVLALGTIIVAGGFAALPFFSGSTLSTRWLMFSAWLVAVGAAAGAAMLWRQGWAGRITTLAAGGYVVWVTASMWLAALLWRIRPPEPF
>NC_009767.1|WP_041330438.1|2091829_2093638_+|elongation-factor-4
MVDQQHIRNFSIIAHIDHGKTTLSDRLLEMTGTISERERREQLLDAMDLERERGITIKSKAVRMHYTARDGQTYQFNLIDTPGHVDFGFEVGRALAAGEGAILVVDASQGIEAQTLANVYLALENDLTIIPVLNKIDLPGADPDHVAMEIEQVLGLPAEDVLRVSAKQGVGIDALLEAIVERIPPPHGQHDRPLRALIFDSHYDPYKGVIAYVRIVDGALPVGARLRMLGTGAEADALEVGAFRPQMTPLDLLDTGEVGYVATGLKQIGECQVGDTITLASMPAEIALPGYRPAKPMVFAGLYPVDTNAYTDLRDALEKLKLNDAALSFVPEKSAALGFGFRCGFLGLLHMEIVRERLEREYGLDLLITAPSVEYQVLLSNGDVITVDNPADMPDAGRIESIEEPIMLITIITPTRYIGSIMELVTGKRGVFESMEHLDPQRVALKYKIPLSEIVVDFYDQLKSRTQGYASLDYTLAGYQPADLVKLDILVNGQPVDALSLIVHRDFAYAQGRALVERLRKLIPRQMFEVPIQAAIGSKVIARETIRAMRKDVLAKCYGGDVTRKRKLLEKQKEGKKRMKMVGSVEIPQEAFMAVLSLNADT
>NC_009767.1|WP_012120140.1|2093682_2094696_+|peptidyl-prolyl-cis-trans-isomerase
MNLKHAIAAVLVVLSLAACGAGSQTVARVDNVTLTRQELDQRIDRIEKGLQQQAGTGFPLPSRLDIEQELVSQFIDQQLTLGLARQRGITVSDADVNEQIERFRQQIQTGSGISLEQAIQEQLGLPGESSPEFRLFVTYFLARQKLGETLVSEVDIRQRISDEVMADTQRMVDVATVAHILVATEDEAKQVIERLDKGEDFADLAKELSQDPGSAENGGVYENIQRGQFVPEFDKAMFEDLQPGETTKTPVQTQFGWHVIRLVSRGEAPALDPANAPAVIEQRVAQELPFEQQSALERLLQSEKQKAIQEQRLVEPTFPTPTPEPLPTIAPLPTPAP
>NC_009767.1|WP_012120141.1|2094692_2096213_+|nucleoside-triphosphate-pyrophosphohydrolase
MITLVGLGPGDPGLITRAAWEMISAARVLYLRTAVHPTVAALPPSVVVRAFDDLYEQAERFDEVYERIADELIARARGGEAVVYATPGDPLTAEATSRHLLRRARAQGVPARVVPGVSFVEPVCALLGVDPLEHGLQLLDALDLMVGDTTVDAPSWASLHGFTYTPPLLPFPLTPTRPALICQVYSRSVASHVKLSLLERYPVDHLVTLVRAAGVVDAEAAVELPLHTLDHRNDFDHLTSLFVPPLTPLADLRGPDGVAYVVARLLGPGGCPWDREQTPQSLRASLLEEVHEALEALDAGNDEALVEELGDVLINVLMLSEMARQAERFDAGEVFNAVAGKLIRRHPHVFGELDVAASDQVLHNWEAIKRAEHATKGVSRQSALDGIPPSLPALAAAQKVVSKAARAGFDAPEIDHAWDALAEELAELRAVTTDPAQAEAELGDLLLAVARLGWRLDVDAESALRAAVARFRRRFARLETLLNGRDLRSLSIDEKLALWERARDDG
>NC_009767.1|WP_041330440.1|2096247_2096448_+|DUF951-domain-containing-protein
MPKPLLDIRVGDVVQMRKPHPCGGDTWQVVRIGAEIGIRCLTCHRKVMLLRSDFERRLKRIVERAT
>NC_009767.1|WP_012120143.1|2096542_2097937_+|nodulation-protein-NfeD
MPANCSSHQRSGMLIAALAIALLLLVWPAGSARAQQSGGPLYLIEVSGIVSAPTIDYLRRAVQIAEASSADALIISYSSTGGVLRDVRVFAAEVAQARVPIVVFITPRGTQAGPAGALFVTAAHISALSPDTSFGSPFPLAQVDDTLSQQTRDLLLDNVSSQMRKWNETRGRNAEWIDRAVREGVILNNQQAISLDPPAIDLVAADLRELLTLIDGRIVTLDDGRVVRISSIGRMPTPIEPTLFESLRLALTDPTVAFALLVLGSMAIYLELNTPGIGLFAGAGFLLLLGAAAGFLALPVLWWAMTLVILGLVLIGAEFVAPTHGGLMITGLVMLGIGGGNLIDATQAPGAGVAWWALLIVIGGIAATAALGLALALRSRKRPAAIGTEALVGRLAQVRRRLDPRGMVFVEGALWQAISETDPVEVGDWVRVVAVHNLQLIVRPLESEESTTREAQPPSTGRVV
>NC_009767.1|WP_012120144.1|2097952_2098798_+|membrane-protein
MGSGALFLCLGVLLFAVLMIGFSAVKIVPEYERGVVFRLGRLVGARGPGLFFLIPIIERMVRVDQRVITMDVPPQEVITLDNVTIKVNAVLYFMVVDPEKAIVKVMDYIRATMQIAQTTLRSVVGQVELDELLARRESINERLQRIIDEQTEPWGVKVTIVEVKDVELPQGMQRAMAKQAEAEREKRAKIIHADGELAASRMLAEAATVIASEPVTLQLRYLQTLTEIAVEKNSTIIFPLPVDTIKIFMDGLEQARRNGVAPVVRREDVSEQPREHDGQAA
>NC_009767.1|WP_012120145.1|2098785_2099568_-|tetratricopeptide-repeat-protein
MATAPGADYAAMLKRWLSQILWIAPEGVIIALLLAINAIVPSIWIGAGMTLLVVTFISRITALYLTSRALFQARWEAADALATVASMLHPWSPDALALRGAIALARSDSATAVRLLQRAQRLAPNRSAITAALSGAYLEEGEPQAAAVAARRALELDPANAAAHLHLAQALAAIGARAELIEDQLRAGLAHHPEPDAEASLRCALAHHLAQEERWAEAALALSAARAVLPHCSAAQRAIVSQRIAEIDRAIHSAREDHAA
>NC_009767.1|WP_012120146.1|2099644_2100949_-|glycosyltransferase
MNILFISAYVPSAIRVRPYGFIRALARRGHHITLVCGANADDRPALSALREVCARIVTVHMGKAEMLWNALRALPGDLPLQAALSFGQRMLEAVRTEDRSNRYDIAHIEHMRASALGYALLRTPAVLDSVDSISLLFERALRGSPSLKSRMLALIDLARTRAYEARYTRHFEQVIVSSPEDAWALRTLRRHLRPHPQPEPQRWCDSATNHNVHDAITVVPNGVDLDYFAPQPIARESATIVFSGKMSYHANEAAALHLVRDIMPLVWERRPEIRVVIAGSAPPPSVRALATDRRVTVTGYLDDLRPAIAGATLAVAPLRYGVGIQNKVLEAMAMATPVVAARHAARALHAVEGRDLLLAEHPREYADAIFRLMEDPQRAAAIGASGRRYVEQHHTWDAAAGRLETVYSTAIEQFNDVTRLSQTADERVAHPIGR
>NC_009767.1|WP_012120147.1|2100951_2102250_-|glycosyltransferase
MNILLLTQIVPYPPDSGPKVKTYHLLRHLAARYRVTLVCFTRNAQEEADANILRNLVAEVHTVPLRRSTVRNALTLAGSLVRGRSWIIERDDSATMHRLLTRLVREAEIAGRPYDLVHADQLNMAQFAEPLPLPRLLDEHNAVWTVFRRVAAQERGLKRLLWEREWRQLRTYEGRVCREFEAVTAVSHEDRQALIDAMGIERHIPVIPIAVDAEREQPIARQPDARGILSLATMMWPPNVDGVLWFARSIYPLIKQQVEGVRFFIVGQRPVPEVRALPEQDPTIEVTGYVPDPTPYIAASACLIVPLRSGGGMRVKILEALARGIPVVSTTIGYEGIDLVPGEHLLVGDTPEAFADAVVRLLRDPDFGAQLAASGRRRLLERYDWRAVCPAMDRVYERMKNQEPRTKNQEPRTKNQEPETENCKPIQSAEEG

Crispr_ID: NC_009767_40

• CRISPR_ID: NC_009767_40
• CRISPR_location: 2178282-2178464
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_009767_40

Consensus_repeat	Method
GTCCCCGTAAGGGCAGGTCTGAGACCTGCCCCTACTACTACCTACCGT	PILER-CR
CGTAAGGGCAGGTCTGAGACCTGCCC	CRISPRCasFinder

spacers of NC_009767_40

>40.1|2178330|26|NC_009767|PILER-CR
GCCCCGCACCCTGGCAAGTCCCCGTA
>40.2|2178404|10|NC_009767|PILER-CR
GCCATGGCAG
>40.3|2178308|31|NC_009767|CRISPRCasFinder
GCCCCGCACCCTGGCAAGTCCCCGTAGTCCC
>40.4|2178365|32|NC_009767|CRISPRCasFinder
CTACTACTACCTACCGTGCCATGGCAGGTCCC
>40.5|2178423|16|NC_009767|CRISPRCasFinder
CTACTACTACCTACCG

CRISPR arrays and Neighbor proteins around NC_009767_40

CRISPR arrays

The CRISPR arrays of NC_009767_40

>merge|NC_009767|40|2178282-2178464|PILER-CR,CRISPRCasFinder
CGTAAGGGCAGGTCTGAGACCTGCCCGCCCCGCACCCTGGCAAGTCCCCGTAGTCCCCGTAAGGGCAGGTCTGAGACCTGCCCCTACTACTACCTACCGTGCCATGGCAGGTCCCCGTAAGGGCAGGTCTGAGACCTGCCCCTACTACTACCTACCGTGCCATGGCAGGTCTCCGACCGGCCC

>NC_009767|40|5|2178282-2178439|PILER-CR
CGTAAGGGCAGGTCTGAGACCTGCCCGCCCCGCACCCTGGCAAGTCCC	CGTAGTCCCCGTAAGGGCAGGTCTGA
GACCTGCCCCTACTACTACCTACCGTGCCATGGCAGGTCCCCGTAAGG	GCAGGTCTGA
GACCTGCCCCTACTACTACCTACCGT

>NC_009767|40|34|2178282-2178464|CRISPRCasFinder
CGTAAGGGCAGGTCTGAGACCTGCCC	GCCCCGCACCCTGGCAAGTCCCCGTAGTCCC
CGTAAGGGCAGGTCTGAGACCTGCCC	CTACTACTACCTACCGTGCCATGGCAGGTCCC
CGTAAGGGCAGGTCTGAGACCTGCCC	CTACTACTACCTACCG
TGCCATGGCAGGTCTCCGACCGGCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120216.1|2190867_2192532_-|peptidase-M9	unknown	unknown	gnl|CDD|366791
NC_009767.1|WP_012120201.1|2163191_2164589_-|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009767.1|WP_012120211.1|2182438_2183878_+|pyruvate-kinase	unknown	unknown	gnl|CDD|223545
NC_009767.1|WP_012120210.1|2181773_2182442_+|ComEA-family-DNA-binding-protein	unknown	unknown	gnl|CDD|224472
NC_009767.1|WP_012120209.1|2178718_2181229_+|type-I-DNA-topoisomerase	unknown	unknown	gnl|CDD|235840
NC_009767.1|WP_012120206.1|2172627_2174382_-|beta-glucosidase	unknown	unknown	gnl|CDD|214807
NC_009767.1|WP_012120214.1|2187593_2188829_-|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270410
NC_009767.1|WP_012120207.1|2174413_2174941_-|pilus-assembly-protein	unknown	unknown	gnl|CDD|377921
NC_009767.1|WP_012120199.1|2161114_2162050_-|type-II-secretion-system-F-family-protein	unknown	unknown	gnl|CDD|224975
NC_009767.1|WP_012120215.1|2189308_2190679_+|dipeptidase	unknown	unknown	gnl|CDD|349929
NC_009767.1|WP_157042592.1|2183992_2184148_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120212.1|2184155_2184428_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120205.1|2170007_2172488_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NC_009767.1|WP_157042807.1|2184564_2185833_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120203.1|2166162_2167173_-|flagellar-protein-FlgA	unknown	unknown	gnl|CDD|274472
NC_009767.1|WP_012120202.1|2164615_2165908_-|MinD/ParA-family-protein	unknown	unknown	gnl|CDD|349765
NC_009767.1|WP_012120198.1|2160734_2161118_-|DUF192-domain-containing-protein	unknown	unknown	gnl|CDD|376876
NC_009767.1|WP_012120204.1|2167329_2169882_-|galactose-oxidase	unknown	unknown	gnl|CDD|276965
NC_009767.1|WP_012120200.1|2162063_2163047_-|secretion-system-protein	unknown	unknown	gnl|CDD|227300
NC_009767.1|WP_041330462.1|2186362_2186575_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120216.1|2190867_2192532_-|peptidase-M9	gnl|CDD|366791	pfam01752, Peptidase_M9, Collagenase. This family of enzymes break down collagens.	3.2387e-17
NC_009767.1|WP_012120201.1|2163191_2164589_-|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	1.8699e-159
NC_009767.1|WP_012120211.1|2182438_2183878_+|pyruvate-kinase	gnl|CDD|223545	COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism].	0
NC_009767.1|WP_012120210.1|2181773_2182442_+|ComEA-family-DNA-binding-protein	gnl|CDD|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	5.65894e-31
NC_009767.1|WP_012120209.1|2178718_2181229_+|type-I-DNA-topoisomerase	gnl|CDD|235840	PRK06599, PRK06599, DNA topoisomerase I; Validated.	0
NC_009767.1|WP_012120206.1|2172627_2174382_-|beta-glucosidase	gnl|CDD|214807	smart00758, PA14, domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.	6.08484e-19
NC_009767.1|WP_012120214.1|2187593_2188829_-|amino-acid-ABC-transporter-substrate-binding-protein	gnl|CDD|270410	cd13692, PBP2_BztA, Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold. BztA is the periplamic-binding protein component of ABC transporter specific for carboxylic amino acids, glutamine and asparagine. The BZtA domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.45238e-103
NC_009767.1|WP_012120207.1|2174413_2174941_-|pilus-assembly-protein	gnl|CDD|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	4.17956e-13
NC_009767.1|WP_012120199.1|2161114_2162050_-|type-II-secretion-system-F-family-protein	gnl|CDD|224975	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].	1.57387e-22
NC_009767.1|WP_012120215.1|2189308_2190679_+|dipeptidase	gnl|CDD|349929	cd05680, M20_dipept_like, uncharacterized M20 dipeptidase. Peptidase M20 family, unknown dipeptidase-like subfamily (inferred by homology to be dipeptidases). M20 dipeptidases include a large variety of bacterial enzymes including cytosolic nonspecific dipeptidase (CNDP), Xaa-methyl-His dipeptidase (anserinase),and canosinase. These dipeptidases have been shown to act on a wide range of dipeptides, but not larger peptides. For example, anserinase mainly catalyzes the hydrolysis of N-alpha-acetylhistidine while carnosinase degrades beta-alanyl-L-histidine.	0
NC_009767.1|WP_012120205.1|2170007_2172488_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	5.74377e-05
NC_009767.1|WP_012120203.1|2166162_2167173_-|flagellar-protein-FlgA	gnl|CDD|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	4.78626e-15
NC_009767.1|WP_012120202.1|2164615_2165908_-|MinD/ParA-family-protein	gnl|CDD|349765	cd03111, CpaE-like, pilus assembly ATPase CpaE. This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.	2.41395e-45
NC_009767.1|WP_012120198.1|2160734_2161118_-|DUF192-domain-containing-protein	gnl|CDD|376876	pfam02643, DUF192, Uncharacterized ACR, COG1430. Two structures have been solved for members of this large (>500 members) family of bacterial proteins present mostly in environmental bacteria and metagenomes (distant homologs are also present in several Plasmodium species). TOPSAN analysis for Structure 3pjy shows that there is much similarity with the other solved structure, Structure 3m7a, solved for UniProt:Q2GA55 (Saro_0823), a homolog of Thermotoga maritima TM1668, UniProt:Q9X1Z6., The homolog in Caulobacter crescentus (CC1388), UniProt:Q9A8G6, is associated with CspD, a cold shock protein (CC1387), UniProt:Q9A8G7. However, the genomic context of UniProt:Q2GA55 is most conserved with a putative xylose isomerase, suggesting a possible role in extracellular sugar processing. Saro_0821, UniProt:Q2GA57, is annotated as an AMP-dependent synthetase and ligase. Structure 3m7a structure corresponds to the C-terminal (27-165) fragment of the YP_496102 (Saro_0823) protein and it is structurally unique, as the best hits from Dali have a Z-score of 3.8 (1nt0, 2j1t, 3kq4) and it is thus a likely candidate for a new fold. Interestingly, many of the top Dali hits are involved in sugar metabolism. There are no obvious active site-like cavities on the protein surface of 3m7a (http://www.topsan.org/Proteins/JCSG/).	1.89292e-31
NC_009767.1|WP_012120204.1|2167329_2169882_-|galactose-oxidase	gnl|CDD|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	2.91245e-09
NC_009767.1|WP_012120200.1|2162063_2163047_-|secretion-system-protein	gnl|CDD|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	1.97138e-46

Protein sequences

>NC_009767.1|WP_012120207.1|2174413_2174941_-|pilus-assembly-protein
MPRRSTGQSLVEMALIAPILFALLFAIVDLGYYIWGYSTLFSAARAGAEVASQLPPYESRLALRGAGDPRWLEDPCVQRILEVTNDSTGFFPVDANQVTILYPNTLDPNPRRLGGTIEVRIDYVIEPLTPLVSFINTMLGDNGTMRIKVTAQRTIESLGNNPNFANGIACTEPQP
>NC_009767.1|WP_012120206.1|2172627_2174382_-|beta-glucosidase
MARRFQPGQALVEFVIASTLILLLLAAAVDIGLLFFNMQGLTTAAQEGATYGSRYLVVQPNGTVDLDYTMIRARVRQEAGTTGGINFVNMYDLNSDAIPDAEDTNGDGVLDHFQYFLDQNGDGRAIGDPVTGLIPEGTQPAGYVRLIDQYILVQAIEDVFPFNGNPLGPEDANGNRADDLVADVDTTPCANLADPNRQCYVFVIVKSDYNTVFGFTPAFGDKVPLSSRFVMPLRAGFVSPGAPTNTPVVQTNTPTPTPTDTPTPTATNTPTRTPTNTASPTTTNTPTNTPTRTNTPTRTNTPTNTNTPTNTNTPTRTPTFTPTPTPCAGGTGNGLRGDYFIYTPGGSVGTTNFFPGAPVASRLENINMARSDTSPIAGVGNDYFSVRWTGQVEPLFSGEYTFYANTDDGVRVWVNGVQIINDWRTKNSETNGRITLTACQRVNITVEYFEWTGSQNAILSWQHANVPKQVIPIQRLYASGSPPATATRTLTPTRTDTPTPSRTPTRTLTPTITNTPTPSRTPTRTLTPTITNTPTNTPPATNTPTRTPTLTPSHTPTLTPSRTPTNTPTRTPTLTPSRTPDTGT
>NC_009767.1|WP_012120205.1|2170007_2172488_-|VWA-domain-containing-protein
MKRRLLHHRTEGQNIVLLAGILALLVGMAALAVDLGVTYAEQRNIVRGTNAASLAGMNRLISGGRDADVALAIYESLRSNGIQVTVPGESPQPGDRAFEALYLGSDGAPIPGACSRVGACGSQRPQGVKYIQIDLKGNVDTYFARLFGQSTLPVGATAYASVGACATGYYPIGVRTTVGGQPMFDEYGFANYDGFYEDETYAQLRYQRLYLRTENNPNGGFSLLRWRNDIPAGNANALAEMLTGDGTYSRGYAEAPWPEIASGTDGPTRPDSYPFEPNTINTADWVYGNVFGGNPFNANVINQLDTLKRNRTLMTLPMYRFDNGSLSNPTYYLERFGAFLLVDYGVDTDGRAPDGPWMELAYVREGGQCANLVTGAPPTNNFTVGGSVTYTPRYQTYPDLNRPVQFLLILDVSGSMSWTFDGRGVQNGQTVFCTNPSQGCVSVQTAWPNAQERRIYTAKQVLRSFVAQIDQDRQSGLRPYDTVRLVTFSGRLGSFVNSSGAVGDNNRALNDLTEVLPAGWTNDRATLEAAINSAGMVDGDPYMTAGATPSAVAFARASQVFANAPERAPNGMKYRRVVIFVTDGVANVLRNGMQNNYGEGCQLGAENVGCQMGDPLPDGSLRPLNAMVAEAQALKEAYIRPSDGSVYVVALSGTFEATGLNLVASQPDYVKRADRSEELQQIFDDIQVSAIQGDCTPSQGELRDSMAPSEVPTDLRPELTDRIVGQVTLTDANNNVREAWITADPITRKLSYAFTNVPPGQYTLRAWLGYRAPQDGISRDKYELLVRGPDVTTEITVQVSAGRSLGGVIGVPISLDLNDSVCPALS
>NC_009767.1|WP_012120204.1|2167329_2169882_-|galactose-oxidase
MTHTTRLSGTMRVLMLIAALLTALAIIPSAPADASVIRFVALDDTQPEFGAGARILTSVVPSTLNNDPIPGQVTEPYAGAKTGSQGALALAAIRALRWGQIPDSPLPAARTEVGAAVIGNTIWVVGGSSAGGTTYHDTVYRGTVNTNYGQPGAGVITWATSTPLPSVSHWDTAPYNNSLSARTNAAVAARRTGGNAGNLYVIGGAVAPGSTFSSNSVLVGDVDTNGNLTWRNPSSPYRLPATVGLEGARAFVHTTTAGKTFLYVVGGIKDQAGPTPPTMSNVVYYAEINADGSLSLGSNNRTWSQTSLPAGVSDTAVTVGRYTKDDGTVQDMFFIYGGRNNASNENLDTNTVLKGVINPTTGAITWEDSTTGGNAVLPANRNGHGAVEFNGSIYVIGGRTGGTINRNGYASYIDPTNLGLFKDGTLNFYQDDFGALPSSAAPGRRNPGVVLVPTSNPNYAFAYLIGGTDGSAPSSQVFRATIGPSDDQTFYPTTGYYYSKPFSMLDLVNEQQATVRKMTWLTNIDAANGGDIRLEYRVYSPSSGNCNDTEGGWSEVRDPDAGSGRFSKFNPSGAAYAINTQEYGEGQRLPPGNCFQYRATFTRGTAQNASPVLLRLGMEVIIPGNPDLNWPNNAVTTTQNADNTTRGVEVRLRNQNQINPPTQPANVCHASQPGCNPEGTFYVDVFIFPPGVTPIMPTLPLFAPGGNSLSNPALAPYHRACLQIPKWVMQKDVTFTIAETFRWSDIKTVGIDGCVSAATNARNNTGKILRDFFDQGSGTYKVILVADSHTDLKGLVYESDAADGNHPAELNNVSAIFDVPFVAGGAPPPDGPAPPPDEPPTRVFLPLVMR
>NC_009767.1|WP_012120203.1|2166162_2167173_-|flagellar-protein-FlgA
MRRGGLLLLLGVVIAAAAALLFFFFFQTPPAPETTALPQEPTPVPLRKVVAARVDIPANTVLTDTETLLTLRDIPEPEYNAAPDQYFTSVGELTTKVTLRALNATEIIRARDLTDAGLSFQVPPPDTIDAPRNKVFPLEVGNLTGVADQIRPGDSVDLVMTYEIRRLIIRPSLTTDPETGQLVVTPIEETLVDRVTKTMVQNVQVLRVLKPAIPQDTGTPTPGGAQGEPAPPPSSAQQQGDTYVPGAQWILLLAMTDQEAEIVKFTLDQQDPKPQITLVLRGRDDGDIEETTGITLRLLTSRYGLPLPEPLQPLALAPEEITPGPARPTPTSFPQP
>NC_009767.1|WP_012120202.1|2164615_2165908_-|MinD/ParA-family-protein
MAGGPRTPDAAGPAKIRVMIVDDIAETRDNIEKLLFFEKDIEVVAKASTGREALALAKQHRPDVVLMDINMPDMDGIAATEALLSQVPEAQVIMMSVQGEQDYLRRAMLAGAREFLPKPIGAEELYSAIRHVHRLASTQRRYITTAPPGAGGSGEDEGAHGQVIAVFSPKGGTGTSSIACNLAVALRLLTNKKVALVDGNLTFGDVGAILNLVSSKTIADLVNRISELDRDLLNDVMATHASQVKVLLAPPNPQTGELVTSDHLRAILEMMKKEFDYVIVDTQASFQDRALAALDMSDRIVALMTLEIPCIKNIKLFLEVAELLEYPKEKIVLVLNKADNRLGMRVENVEANIQHKVALQIANAGHEMTLAVNQGVPLVISKRDLPTAKDIVALAKLLSSGLAAQTATTAKKTEKAPEKSGLFGKLLARR
>NC_009767.1|WP_012120201.1|2163191_2164589_-|CpaF-family-protein
MSLLKRIGGTPGATGQLPNTPAVGGAAAARPGAPVAPRREEENSIIELRQRVQQRLINELDPRLDLSNVARVRQQVEEIFNTILDSENIVLSRSERARLFESIAADILGFGPLQELLNDPEISEIMVNGPRKVYVEKRGKIQLSDVTFVDEQHVLRVIDRIVAPLGRRIDESSPMVDARLPDGSRVNAVIRPIALCGPTISIRKFRKEGITIEDLIRFGSLTREMAEFLSACVRASLNIVVSGGTGSGKTTMLNVLSSFIPDDERIITVENAAELQLRQEHVVPLESRPPNVEGKGEISIRDLVINTLRMRPERIVVGECRGGEALEMLQAMNTGHDGSMTTLHANSPRDAIARIETMCLMAGMDLPVRAIREQIASAVNLIVQLARLKDGSRKVIYITEVQGMEGDVVVLSDIFVFEQQGIDERGKIIGQLKPTGIRPRFIDRFEERNIYLPPNIFGYSSGSFF
>NC_009767.1|WP_012120200.1|2162063_2163047_-|secretion-system-protein
MPISADLTRFIAPAAIFVVILAVFALLARRSAGNASYEERLTQFAGRRTDQLQRSAKDQLREIDKVVARGKRGSETQRNLARADLKLTVTEFYAIKLLAAAVGAAVGAFIGRASWEAQLLSGIVGFALFSFFPDLYVGYAAKQRVTKFNAQLGDTINMLANSLRSGYSLLQSMELVSREAPEPTASEYRRVVQEVGLGLRTEDALDNLLKRVPSEDLDLLITAVKIQMESGGNLAQILDTIGHTIRERIRIKGEIAVLTAQGRISAYVITGLPIGLAIFITVINPNYMSPMFSFGMPPEHWCCLPVAGIVMIVIGFFAIMKIVDIEV
>NC_009767.1|WP_012120199.1|2161114_2162050_-|type-II-secretion-system-F-family-protein
MMSMLPMIGFGALMLLGVGLIVFGMRRSSQPDAISDRLSQFTERTMTLEEMELQQPFSQRVLVPLTKSILAKLGEYGPKQSAERLRISLAQAGNPGNLTPIQFSGIRLALAVILFLVVGAVTFLQGMEMSQALMYTAIGGVMGYLLPGIWLGQQIKKRKKAIIKALPDALDLLCICVEAGLSFDQAMQRLTEKWEDPLSKEFKRVLSDTRLGRPRRDAMKDMIDRCGVDDVQTFIGAVIQAEQLGVSIGRILRIQSDQMRIRRRQRAEEEAHKAPIKMLFPMVFLIFPALFIVILGPAVPRIMKSLGGLGG
>NC_009767.1|WP_012120198.1|2160734_2161118_-|DUF192-domain-containing-protein
MSTPSVASLTVIENLTRGTVIADRAEVARSLLARGRGLMGRTNLPAGYGLILVPESSIHMFFMRIPIDVLFVDRQHRVIGVREALPPWHPFAGVAPWRGHYVVELPVGAIRASGTEVGDKLRVTPGI
>NC_009767.1|WP_012120209.1|2178718_2181229_+|type-I-DNA-topoisomerase
MGEKLVIVESPAKARTIQKYLGSGYRVEASMGHVRDLPKSNLGVDLEANFAPVYEISPGKEKIIAALRKSIRQADAVYLATDPDREGEAIAWHITEAAKIPRDKPVYRVVFTEITPGAVRSAMASPRDIDRRLVDAQQARRVLDRLVGYKLSPLLWEKVRRGLSAGRVQSVAVRLIVEREREIEAFVPQEYWTIEADLLKQNASDSQRDAFRAMLIERSGKKLEKFDIGASDQAQAIIADLEGAAYIVRKVTRRDKRRSPAPPFTTSTLQQEAGRKLGFSAKRTMAVAQQLYEGVDIGGDEGLVGLITYMRTDSVNVSREAQEEARRVIRERFGEAYLPAKPPVYKTKAKGAQEAHEAIRPTLSRRTPEQVQPYLTSDQYRLYDLIWKRFVASQMEAAVFDSTVVDIGAGRDIGGRGAGSDPYTFRATGSVLKFPGFLAVYNVSLDEGEEDEDSERRLPLLEEGEALNLLQLLPVQHFTEPPPRFTEASLVKELERLGIGRPSTYAPTISTIIEREYVELADKKLVPTTLGRVVTDLLVEHFPSIVDYGFTSEMEQQLDDIAEGEKEWAPVLRAFYRPFEQKLAEAQRSMRNVKREEILTDLTCPRCNQGQLAVKFGRNGEFLACNRYPECDFTSDFHRDSDGRIVLDAPASPETSDVLCDVCGRPMILKKSRFGPFLGCSGYPECKNTRRLDKQGKPAPLPKATGVTCPKCGQGELLERRGKFGRPFFGCNRYPKCDYLVNSLDEVAHYTPDANEASKPQAEEPTATDAKATPARKRVKTDANGAAAAGKRVKTDANGAVAGEPMKTKASANGKRAKTGTNGAAAAPPKKRGTER
>NC_009767.1|WP_012120210.1|2181773_2182442_+|ComEA-family-DNA-binding-protein
MELFSELMQRKALVAAALLFALGAGILGQTALERLTPQGVQSGPNEPAADVSDDTFVEDSLDQDESVRPATPTRVACIVAYISGAVRAPDVYQLPVGARVKDLVLAAGGLSDDADIERINLAAPIADGQHVRVPWIGDGATMAATAPTESPASGESSGLIDLNRATAAELDALPGIGNVLANRIVEWREREGPFQSVDDLGKVEGIGPALLAKLKPLVTVAP
>NC_009767.1|WP_012120211.1|2182438_2183878_+|pyruvate-kinase
MTEQEHMRRTKIVATIGPVSSSPEMIERLLTAGMDVARLNFSHGTHEEHAQRIQVLRDIAARKERPLALLQDLQGPKIRTGPLVDRKPVMLRAGDRFTITTRNVPGTASLVSTTYAALPRDVHPGDRILISDGLIEAQVVRVSGSEVETEIVVGGELRENQGINLPGVEVSAPALTDKDRSDLRFGLAHGVDYVALSFVRRASDLLEIKAQITAAGASTPVIAKIEKPEALREFEAILEAADGIMVARGDLGVEMPPEQVPIVQKQLIEAANMAGKPVITATQMLDSMIRNPRPTRAEASDVANAIIDGTDAVMLSGETATGAYPVEAVRMMARIADVTEASGRRGDHSHESIWRFHEQPTVAAAISAAVHAIVQTLPVTSIVAFTMSGNTARLIARQRPKTPIFAFTPSEVVCRRLNLIWGVTPILSPYVDRLDDLENAVRSTLLGLGYARPGDQIAITGGHPIAARGTTNFVKVTRL
>NC_009767.1|WP_157042592.1|2183992_2184148_+|hypothetical-protein
MLETGLPGLLIVLALAVILCGPAPFVQGWRWLRRRAQEMVRSVRSKSLQEE
>NC_009767.1|WP_012120212.1|2184155_2184428_+|hypothetical-protein
MHQACALPWHTVVLLVAVALLSILMASPVALAAEPTPTPTVAVAREDNLAGPLLGLSLAMASSALAVGIALGLRRRIDEIGEASDARGQE
>NC_009767.1|WP_157042807.1|2184564_2185833_+|hypothetical-protein
MPAPASVPPDMMGIVIRDPWFDFDTNPAFPGQSNKTFQDRMGAVLAQMGVRWVRLDFRIAAPLDADPRLPPDFIEREIARNDYFINEVAPRYGFKVLGLLSFDLIQGTDAHVLNTGPFTETSIYGGGVNRYMDEWLTRALMIADRYGERVAAYQVLNEQNRLPQYLPGGPAGDGIEPVIVARMVTKLYRFCRGIPPLPRPERYGCATAAIILGGLHPRGATDGWSDQTILTDADYLKQIYASEPFQGFRDANSRWPIDGIGYHPYPEEIRLSPNDALVDRGLNRMRAALVEAGDPNVPFWITEIGYNVGFDVDGPRGPMPPQTEAGQAAFLHDVYVSLAARGDVARIFWFKYEDFPPADGPNAQRWGLVRIPFRAPQPGENCPGGACYAVDGEPERWRPAYLIYREIAGLPVYRQHFPIMAR
>NC_009767.1|WP_041330462.1|2186362_2186575_+|hypothetical-protein
MTDCFDRLRRWRSDEVASTGCAGLAMTACFDRLRRWRSDRASRHVCEGIASPPAAARNDRLLRPAAPVAQ
>NC_009767.1|WP_012120214.1|2187593_2188829_-|amino-acid-ABC-transporter-substrate-binding-protein
MHTSPNARTIALLLLTLILAGCGDLGGLLGNQPTPAPIILIATATPVPPSQATPTTDIVPSPTVAPPDTPVATSVLPTAAPPTPTPAPQKILARVKERGYLICGTNADLPGFGFYDNVRQAWSGFDVDFCRAVAAAIFGDATKVEFVALGTGPGPNNRFDAVREGRVDVLFRNTTWTLGRNISGLAFGPTTFHDGQTFMVRIRDRITKLEDLAGKVICVAKGTTSEQNLNDDFAARGIQFTARVLNGEDELYPAYDEGECDAVTSDSSQLAAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNVDRLRASTTDPRIKRLLGLEGNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVINLDRGPNKVWNLGAGGVLASPPFR
>NC_009767.1|WP_012120215.1|2189308_2190679_+|dipeptidase
MTWQTYLREQQDRFLAELLDFLHIPSVSALPEHAGDVQRAAEWVAERMRTAGIESVQILPTGGHPVVYGDWLHAPGKPTVLIYGHFDTQPADPLELWEHPPFEPVVRDGRVYARGASDDKGNMLPPILAVEALLRTTGALPVNVRFLFEGQEEIGSPQIPAFVKAHREMLACDLVVSSDGGQWSETEPVILTGLRGGCGVQIDVRGPNRDLHSGIYGGAVQNPIHALASILASMRGADGRILVEGFYDAVQPLTDDERRRFASAPFDEAAYMADLGVTALWGEAGYTVYERTWARPTLEINGVWGGFQGEGVKTVLPAEAHAKITCRLVANQDPATIVELIKAHVQQHTPPGVTVAVTPLKFLAKPYLMPFDHPGNRAARDVLVHMYGREPYEVRSGGSIPICTILLDELGVYTVNFAFALEDERQHSPNEFFRLSSFRRGQEGYCLLLERLADVG
>NC_009767.1|WP_012120216.1|2190867_2192532_-|peptidase-M9
MPRTTPAILLLVLVLTTTAPSPLQPPPTPACPRTYHIGPHSLIVMLYASGYDCTEEIAHALAAIADDQILERLIALTAPDFHSLTRRNALRVIGRMAERPPREPAHRVVARAAPALRIHLLTLLHTDPHDDVRADAIWILDTFFFPAYDAQPAFTTIALTPGSGANLRTRAAYAAARLIATRVGPLHDDDLAFLLAGLQSDEPGVRARAADAIARLRDDQLDVAARARVTAALEDAWTSAARLAPADALPSAPPAIHAGRFISGIPETSPGPFAARAALARALDRFGGERFAVLRAEFETIHLSSCLDQRTVRICTGSSTANLSAITAQLERLRTFFFDLTGITDPVPGDPHEQLTIKIFANRSVFREYMLAFVGFGADVDGIYVERDGVLFTYERNAAESVNTTDETIAHEFGHYLNGRYLFPGVWHDPGYHAEPKGWFDEGIAEYLAALSDSGAGSRAALDRLCTHSVPPDLARLLGQRDGYDQYGTFAYDEAWAFVTFLHQERPSAIRAIAAAFRANTYRQSDVPDLVGAPSLATIEMEWHAALVRWCRQR

Crispr_ID: NC_009767_41

• CRISPR_ID: NC_009767_41
• CRISPR_location: 2186946-2187029
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_41

Consensus_repeat	Method
CATGGATGCCCGTGCGCGGGGGG	CRISPRCasFinder

spacers of NC_009767_41

>41.1|2186969|38|NC_009767|CRISPRCasFinder
GGCGCCCGACGGCGTTGTCGTGGACCGGGGGCGAACCC

CRISPR arrays and Neighbor proteins around NC_009767_41

CRISPR arrays

The CRISPR arrays of NC_009767_41

>merge|NC_009767|41|2186946-2187029|CRISPRCasFinder
CATGGATGCCCGTGCGCGGGGGGGGCGCCCGACGGCGTTGTCGTGGACCGGGGGCGAACCCCATGGATGCCCATGCGCGGGGGG

>NC_009767|41|35|2186946-2187029|CRISPRCasFinder
CATGGATGCCCGTGCGCGGGGGG	GGCGCCCGACGGCGTTGTCGTGGACCGGGGGCGAACCC
CATGGATGCCCATGCGCGGGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120218.1|2193229_2194072_+|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl|CDD|224016
NC_009767.1|WP_157042807.1|2184564_2185833_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120211.1|2182438_2183878_+|pyruvate-kinase	unknown	unknown	gnl|CDD|223545
NC_009767.1|WP_012120209.1|2178718_2181229_+|type-I-DNA-topoisomerase	unknown	unknown	gnl|CDD|235840
NC_009767.1|WP_012120210.1|2181773_2182442_+|ComEA-family-DNA-binding-protein	unknown	unknown	gnl|CDD|224472
NC_009767.1|WP_012120206.1|2172627_2174382_-|beta-glucosidase	unknown	unknown	gnl|CDD|214807
NC_009767.1|WP_012120214.1|2187593_2188829_-|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270410
NC_009767.1|WP_012120216.1|2190867_2192532_-|peptidase-M9	unknown	unknown	gnl|CDD|366791
NC_009767.1|WP_012120220.1|2195194_2196025_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133031
NC_009767.1|WP_012120215.1|2189308_2190679_+|dipeptidase	unknown	unknown	gnl|CDD|349929
NC_009767.1|WP_012120223.1|2198624_2201285_-|hypothetical-protein	unknown	unknown	gnl|CDD|379080
NC_009767.1|WP_012120212.1|2184155_2184428_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120219.1|2194243_2195182_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133029
NC_009767.1|WP_012120205.1|2170007_2172488_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NC_009767.1|WP_012120222.1|2196724_2197279_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_009767.1|WP_041330462.1|2186362_2186575_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042592.1|2183992_2184148_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120217.1|2192636_2192978_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120207.1|2174413_2174941_-|pilus-assembly-protein	unknown	unknown	gnl|CDD|377921
NC_009767.1|WP_012120221.1|2196037_2196592_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120218.1|2193229_2194072_+|dTDP-4-dehydrorhamnose-reductase	gnl|CDD|224016	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane].	1.6391e-93
NC_009767.1|WP_012120222.1|2196724_2197279_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.7167e-39
NC_009767.1|WP_012120211.1|2182438_2183878_+|pyruvate-kinase	gnl|CDD|223545	COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism].	0
NC_009767.1|WP_012120209.1|2178718_2181229_+|type-I-DNA-topoisomerase	gnl|CDD|235840	PRK06599, PRK06599, DNA topoisomerase I; Validated.	0
NC_009767.1|WP_012120210.1|2181773_2182442_+|ComEA-family-DNA-binding-protein	gnl|CDD|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	5.65894e-31
NC_009767.1|WP_012120206.1|2172627_2174382_-|beta-glucosidase	gnl|CDD|214807	smart00758, PA14, domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.	6.08484e-19
NC_009767.1|WP_012120214.1|2187593_2188829_-|amino-acid-ABC-transporter-substrate-binding-protein	gnl|CDD|270410	cd13692, PBP2_BztA, Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold. BztA is the periplamic-binding protein component of ABC transporter specific for carboxylic amino acids, glutamine and asparagine. The BZtA domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.45238e-103
NC_009767.1|WP_012120215.1|2189308_2190679_+|dipeptidase	gnl|CDD|349929	cd05680, M20_dipept_like, uncharacterized M20 dipeptidase. Peptidase M20 family, unknown dipeptidase-like subfamily (inferred by homology to be dipeptidases). M20 dipeptidases include a large variety of bacterial enzymes including cytosolic nonspecific dipeptidase (CNDP), Xaa-methyl-His dipeptidase (anserinase),and canosinase. These dipeptidases have been shown to act on a wide range of dipeptides, but not larger peptides. For example, anserinase mainly catalyzes the hydrolysis of N-alpha-acetylhistidine while carnosinase degrades beta-alanyl-L-histidine.	0
NC_009767.1|WP_012120220.1|2195194_2196025_+|glycosyltransferase-family-2-protein	gnl|CDD|133031	cd04188, DPG_synthase, DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.	2.30323e-77
NC_009767.1|WP_012120216.1|2190867_2192532_-|peptidase-M9	gnl|CDD|366791	pfam01752, Peptidase_M9, Collagenase. This family of enzymes break down collagens.	3.2387e-17
NC_009767.1|WP_012120223.1|2198624_2201285_-|hypothetical-protein	gnl|CDD|379080	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.	1.18197e-06
NC_009767.1|WP_012120219.1|2194243_2195182_+|glycosyltransferase-family-2-protein	gnl|CDD|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.10908e-53
NC_009767.1|WP_012120205.1|2170007_2172488_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	5.74377e-05
NC_009767.1|WP_012120207.1|2174413_2174941_-|pilus-assembly-protein	gnl|CDD|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	4.17956e-13
NC_009767.1|WP_012120221.1|2196037_2196592_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	7.40855e-39

Protein sequences

>NC_009767.1|WP_041330462.1|2186362_2186575_+|hypothetical-protein
MTDCFDRLRRWRSDEVASTGCAGLAMTACFDRLRRWRSDRASRHVCEGIASPPAAARNDRLLRPAAPVAQ
>NC_009767.1|WP_157042807.1|2184564_2185833_+|hypothetical-protein
MPAPASVPPDMMGIVIRDPWFDFDTNPAFPGQSNKTFQDRMGAVLAQMGVRWVRLDFRIAAPLDADPRLPPDFIEREIARNDYFINEVAPRYGFKVLGLLSFDLIQGTDAHVLNTGPFTETSIYGGGVNRYMDEWLTRALMIADRYGERVAAYQVLNEQNRLPQYLPGGPAGDGIEPVIVARMVTKLYRFCRGIPPLPRPERYGCATAAIILGGLHPRGATDGWSDQTILTDADYLKQIYASEPFQGFRDANSRWPIDGIGYHPYPEEIRLSPNDALVDRGLNRMRAALVEAGDPNVPFWITEIGYNVGFDVDGPRGPMPPQTEAGQAAFLHDVYVSLAARGDVARIFWFKYEDFPPADGPNAQRWGLVRIPFRAPQPGENCPGGACYAVDGEPERWRPAYLIYREIAGLPVYRQHFPIMAR
>NC_009767.1|WP_012120212.1|2184155_2184428_+|hypothetical-protein
MHQACALPWHTVVLLVAVALLSILMASPVALAAEPTPTPTVAVAREDNLAGPLLGLSLAMASSALAVGIALGLRRRIDEIGEASDARGQE
>NC_009767.1|WP_157042592.1|2183992_2184148_+|hypothetical-protein
MLETGLPGLLIVLALAVILCGPAPFVQGWRWLRRRAQEMVRSVRSKSLQEE
>NC_009767.1|WP_012120211.1|2182438_2183878_+|pyruvate-kinase
MTEQEHMRRTKIVATIGPVSSSPEMIERLLTAGMDVARLNFSHGTHEEHAQRIQVLRDIAARKERPLALLQDLQGPKIRTGPLVDRKPVMLRAGDRFTITTRNVPGTASLVSTTYAALPRDVHPGDRILISDGLIEAQVVRVSGSEVETEIVVGGELRENQGINLPGVEVSAPALTDKDRSDLRFGLAHGVDYVALSFVRRASDLLEIKAQITAAGASTPVIAKIEKPEALREFEAILEAADGIMVARGDLGVEMPPEQVPIVQKQLIEAANMAGKPVITATQMLDSMIRNPRPTRAEASDVANAIIDGTDAVMLSGETATGAYPVEAVRMMARIADVTEASGRRGDHSHESIWRFHEQPTVAAAISAAVHAIVQTLPVTSIVAFTMSGNTARLIARQRPKTPIFAFTPSEVVCRRLNLIWGVTPILSPYVDRLDDLENAVRSTLLGLGYARPGDQIAITGGHPIAARGTTNFVKVTRL
>NC_009767.1|WP_012120210.1|2181773_2182442_+|ComEA-family-DNA-binding-protein
MELFSELMQRKALVAAALLFALGAGILGQTALERLTPQGVQSGPNEPAADVSDDTFVEDSLDQDESVRPATPTRVACIVAYISGAVRAPDVYQLPVGARVKDLVLAAGGLSDDADIERINLAAPIADGQHVRVPWIGDGATMAATAPTESPASGESSGLIDLNRATAAELDALPGIGNVLANRIVEWREREGPFQSVDDLGKVEGIGPALLAKLKPLVTVAP
>NC_009767.1|WP_012120209.1|2178718_2181229_+|type-I-DNA-topoisomerase
MGEKLVIVESPAKARTIQKYLGSGYRVEASMGHVRDLPKSNLGVDLEANFAPVYEISPGKEKIIAALRKSIRQADAVYLATDPDREGEAIAWHITEAAKIPRDKPVYRVVFTEITPGAVRSAMASPRDIDRRLVDAQQARRVLDRLVGYKLSPLLWEKVRRGLSAGRVQSVAVRLIVEREREIEAFVPQEYWTIEADLLKQNASDSQRDAFRAMLIERSGKKLEKFDIGASDQAQAIIADLEGAAYIVRKVTRRDKRRSPAPPFTTSTLQQEAGRKLGFSAKRTMAVAQQLYEGVDIGGDEGLVGLITYMRTDSVNVSREAQEEARRVIRERFGEAYLPAKPPVYKTKAKGAQEAHEAIRPTLSRRTPEQVQPYLTSDQYRLYDLIWKRFVASQMEAAVFDSTVVDIGAGRDIGGRGAGSDPYTFRATGSVLKFPGFLAVYNVSLDEGEEDEDSERRLPLLEEGEALNLLQLLPVQHFTEPPPRFTEASLVKELERLGIGRPSTYAPTISTIIEREYVELADKKLVPTTLGRVVTDLLVEHFPSIVDYGFTSEMEQQLDDIAEGEKEWAPVLRAFYRPFEQKLAEAQRSMRNVKREEILTDLTCPRCNQGQLAVKFGRNGEFLACNRYPECDFTSDFHRDSDGRIVLDAPASPETSDVLCDVCGRPMILKKSRFGPFLGCSGYPECKNTRRLDKQGKPAPLPKATGVTCPKCGQGELLERRGKFGRPFFGCNRYPKCDYLVNSLDEVAHYTPDANEASKPQAEEPTATDAKATPARKRVKTDANGAAAAGKRVKTDANGAVAGEPMKTKASANGKRAKTGTNGAAAAPPKKRGTER
>NC_009767.1|WP_012120207.1|2174413_2174941_-|pilus-assembly-protein
MPRRSTGQSLVEMALIAPILFALLFAIVDLGYYIWGYSTLFSAARAGAEVASQLPPYESRLALRGAGDPRWLEDPCVQRILEVTNDSTGFFPVDANQVTILYPNTLDPNPRRLGGTIEVRIDYVIEPLTPLVSFINTMLGDNGTMRIKVTAQRTIESLGNNPNFANGIACTEPQP
>NC_009767.1|WP_012120206.1|2172627_2174382_-|beta-glucosidase
MARRFQPGQALVEFVIASTLILLLLAAAVDIGLLFFNMQGLTTAAQEGATYGSRYLVVQPNGTVDLDYTMIRARVRQEAGTTGGINFVNMYDLNSDAIPDAEDTNGDGVLDHFQYFLDQNGDGRAIGDPVTGLIPEGTQPAGYVRLIDQYILVQAIEDVFPFNGNPLGPEDANGNRADDLVADVDTTPCANLADPNRQCYVFVIVKSDYNTVFGFTPAFGDKVPLSSRFVMPLRAGFVSPGAPTNTPVVQTNTPTPTPTDTPTPTATNTPTRTPTNTASPTTTNTPTNTPTRTNTPTRTNTPTNTNTPTNTNTPTRTPTFTPTPTPCAGGTGNGLRGDYFIYTPGGSVGTTNFFPGAPVASRLENINMARSDTSPIAGVGNDYFSVRWTGQVEPLFSGEYTFYANTDDGVRVWVNGVQIINDWRTKNSETNGRITLTACQRVNITVEYFEWTGSQNAILSWQHANVPKQVIPIQRLYASGSPPATATRTLTPTRTDTPTPSRTPTRTLTPTITNTPTPSRTPTRTLTPTITNTPTNTPPATNTPTRTPTLTPSHTPTLTPSRTPTNTPTRTPTLTPSRTPDTGT
>NC_009767.1|WP_012120205.1|2170007_2172488_-|VWA-domain-containing-protein
MKRRLLHHRTEGQNIVLLAGILALLVGMAALAVDLGVTYAEQRNIVRGTNAASLAGMNRLISGGRDADVALAIYESLRSNGIQVTVPGESPQPGDRAFEALYLGSDGAPIPGACSRVGACGSQRPQGVKYIQIDLKGNVDTYFARLFGQSTLPVGATAYASVGACATGYYPIGVRTTVGGQPMFDEYGFANYDGFYEDETYAQLRYQRLYLRTENNPNGGFSLLRWRNDIPAGNANALAEMLTGDGTYSRGYAEAPWPEIASGTDGPTRPDSYPFEPNTINTADWVYGNVFGGNPFNANVINQLDTLKRNRTLMTLPMYRFDNGSLSNPTYYLERFGAFLLVDYGVDTDGRAPDGPWMELAYVREGGQCANLVTGAPPTNNFTVGGSVTYTPRYQTYPDLNRPVQFLLILDVSGSMSWTFDGRGVQNGQTVFCTNPSQGCVSVQTAWPNAQERRIYTAKQVLRSFVAQIDQDRQSGLRPYDTVRLVTFSGRLGSFVNSSGAVGDNNRALNDLTEVLPAGWTNDRATLEAAINSAGMVDGDPYMTAGATPSAVAFARASQVFANAPERAPNGMKYRRVVIFVTDGVANVLRNGMQNNYGEGCQLGAENVGCQMGDPLPDGSLRPLNAMVAEAQALKEAYIRPSDGSVYVVALSGTFEATGLNLVASQPDYVKRADRSEELQQIFDDIQVSAIQGDCTPSQGELRDSMAPSEVPTDLRPELTDRIVGQVTLTDANNNVREAWITADPITRKLSYAFTNVPPGQYTLRAWLGYRAPQDGISRDKYELLVRGPDVTTEITVQVSAGRSLGGVIGVPISLDLNDSVCPALS
>NC_009767.1|WP_012120214.1|2187593_2188829_-|amino-acid-ABC-transporter-substrate-binding-protein
MHTSPNARTIALLLLTLILAGCGDLGGLLGNQPTPAPIILIATATPVPPSQATPTTDIVPSPTVAPPDTPVATSVLPTAAPPTPTPAPQKILARVKERGYLICGTNADLPGFGFYDNVRQAWSGFDVDFCRAVAAAIFGDATKVEFVALGTGPGPNNRFDAVREGRVDVLFRNTTWTLGRNISGLAFGPTTFHDGQTFMVRIRDRITKLEDLAGKVICVAKGTTSEQNLNDDFAARGIQFTARVLNGEDELYPAYDEGECDAVTSDSSQLAAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNVDRLRASTTDPRIKRLLGLEGNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVINLDRGPNKVWNLGAGGVLASPPFR
>NC_009767.1|WP_012120215.1|2189308_2190679_+|dipeptidase
MTWQTYLREQQDRFLAELLDFLHIPSVSALPEHAGDVQRAAEWVAERMRTAGIESVQILPTGGHPVVYGDWLHAPGKPTVLIYGHFDTQPADPLELWEHPPFEPVVRDGRVYARGASDDKGNMLPPILAVEALLRTTGALPVNVRFLFEGQEEIGSPQIPAFVKAHREMLACDLVVSSDGGQWSETEPVILTGLRGGCGVQIDVRGPNRDLHSGIYGGAVQNPIHALASILASMRGADGRILVEGFYDAVQPLTDDERRRFASAPFDEAAYMADLGVTALWGEAGYTVYERTWARPTLEINGVWGGFQGEGVKTVLPAEAHAKITCRLVANQDPATIVELIKAHVQQHTPPGVTVAVTPLKFLAKPYLMPFDHPGNRAARDVLVHMYGREPYEVRSGGSIPICTILLDELGVYTVNFAFALEDERQHSPNEFFRLSSFRRGQEGYCLLLERLADVG
>NC_009767.1|WP_012120216.1|2190867_2192532_-|peptidase-M9
MPRTTPAILLLVLVLTTTAPSPLQPPPTPACPRTYHIGPHSLIVMLYASGYDCTEEIAHALAAIADDQILERLIALTAPDFHSLTRRNALRVIGRMAERPPREPAHRVVARAAPALRIHLLTLLHTDPHDDVRADAIWILDTFFFPAYDAQPAFTTIALTPGSGANLRTRAAYAAARLIATRVGPLHDDDLAFLLAGLQSDEPGVRARAADAIARLRDDQLDVAARARVTAALEDAWTSAARLAPADALPSAPPAIHAGRFISGIPETSPGPFAARAALARALDRFGGERFAVLRAEFETIHLSSCLDQRTVRICTGSSTANLSAITAQLERLRTFFFDLTGITDPVPGDPHEQLTIKIFANRSVFREYMLAFVGFGADVDGIYVERDGVLFTYERNAAESVNTTDETIAHEFGHYLNGRYLFPGVWHDPGYHAEPKGWFDEGIAEYLAALSDSGAGSRAALDRLCTHSVPPDLARLLGQRDGYDQYGTFAYDEAWAFVTFLHQERPSAIRAIAAAFRANTYRQSDVPDLVGAPSLATIEMEWHAALVRWCRQR
>NC_009767.1|WP_012120217.1|2192636_2192978_-|hypothetical-protein
MHMRWIGVTLVALLTATLMAGIIGISIVQRRVIDAPHINLTLGSFHIRAFATHTPNCRIPGNQQGNSFCSSHSIYSTDEYYVVWLLNRSHRGAVTFEAAHRLAVIRLDPDSTP
>NC_009767.1|WP_012120218.1|2193229_2194072_+|dTDP-4-dehydrorhamnose-reductase
MRIAVTGAGGQLGKALQRVLSDAHEIIPLNHADLDLERSDCVQALVATDAQCVIHPAAYTHVDGCARDPDRAYRVNALGTRYVALACQALDAPLVYVSTNEVFDGTATSPYLEYDRPAPINPYGFSKWAGEQVVRELLRRFYIVRVAWLFGGERNFVRTVLRLAHERNEIAMVADEIGSPTYAPDAAAAIARLIETPYYGTYHLVNEGSCSRYEFAAATLRLAERTDVTLRPISLAEYQRASRVPPYTPLRNVAAADLGIRLRPWEEALTEYVGGLKNGG
>NC_009767.1|WP_012120219.1|2194243_2195182_+|glycosyltransferase-family-2-protein
MIDIIIPNYNGASLLPTCLDSLRAQTRRDFCVVVVDDGSADDSVALVQRRYPEVQVIALPRNRGLAAAVNTGIEATGGEYVVLLNNDTEAHPRWLEHLIGALDRYPAYAFAASKMMLFDRRDHIHSAGDYYRFDGVPGSRGVWQRDVGQFDVMEEVFGPCAGAAAYRRAALEELAEDGRVFDEDLVMYCEDVDLNVRARLRGMRTVYVPRAVVYHRLSATGGGALASYYCGRNFMLVWTKNMPAPQVRRYLPLLIWSQIRFVVHSLWHIREPAARARLRGQFDGLRTLPRFVRKRRHTTGRDAGRLVVETRY
>NC_009767.1|WP_012120220.1|2195194_2196025_+|glycosyltransferase-family-2-protein
MTSIESSPYLSVVIPAYNEERRLPATLRRVLDYLAQQPYASEVIVADDGSSDGTAAYVDRQLDVHRNLFLLRLDHRGKGYAVRSGALMARGEYILLCDADPAVPIEEWERLRRYLESGYDVAIGSREGLGARRIGEPWYRHIMGRIFNTIVRLVAVGGIQDTQCGFKALRRAVAHDLFRRVRIYGDDAPQVEGAAVTAYDVELLYLAVRRGYRIAEVPVVWQYGEETKVNPLRDSWRNLRDVLKVRWYALRGRYAGLDAPLATMAEESARRTIDIR
>NC_009767.1|WP_012120221.1|2196037_2196592_+|Uma2-family-endonuclease
MPVATAAITAEDLAQMSFGEQRVELVRGEVITMAPAGADHGEMAMTLGALIYTFVRERRLGVVYAAETGFILARNPDTVRAPDVAFVASERAAQQRGRSGFFEGPPDLAVEVVSPGDTAEDVEAKVLDYLEAGARMVWIVRPRTRTVTVYHSLRAVQVLRPGDLLDGGDVLPGFAVPVATLFGG
>NC_009767.1|WP_012120222.1|2196724_2197279_+|Uma2-family-endonuclease
MSIEAAAITAEDLAQMSFGEQRVELVRGEVITMAPAGAEHGEIAGFVFGILFSFVRAHNLGSLYAAETGFILARNPDTVRAPDVAFVASERAAQQRGRSGFFEGPPDLAVEVVSPSDTAEDVEAKVLDYLEAGARMVWIVRPRTRTVTVYHSLRAVQVLRPGDLLDGGDVLPGFAVPVAALFGG
>NC_009767.1|WP_012120223.1|2198624_2201285_-|hypothetical-protein
MRTRIAGALAPAALAALVAMHLLFFALRAWHVLTFPYPLDYGEGPLLAQVNALRSGISLPHLYSDPGTPPYLVVNYPPVYLVAVWLIAPLFDVAFPGSDATLLAGRLVTLLATLGSTFLLWRLAAPPHDSHSTAMPRIAVFITALAFLALPIVREWGALMRVDMLGVYLGLWGLLLTRRLSRWAALPLALSLLVKPSLIAAPAAALIWLWFRHRRRALEVALIIAAIGGAAAGALQLASGGWFWLHVVAANANPWSAALAEGFWQDQAAILWSLWLGAVCAAALLLARAAPDVSNRRCPVLPSDTTPAHGLLPVVYTCFGAYVAFGVGKVGAYTNYFLEFYAGAIWLIAAAIASLLATDRSRHGQRLSSTRRSDKPAPVSDAPAPSLSSRISMLTSWFLAAGARTQPSAARSRHFNSRFSVLSSSTLLLLLAAALLRYYPLWSENYVKPYGLIEGDNPPRLAFGAYGVWRDLQREQEILATLRRVNAALVADAQAAGAPIVTDIPGIAAQAGVPSRLQAFEHRQLYDAGLLDQRPLLRDMANGRVPLVVLDYLGNWLTPEMIALITHRYAQTGSRGTFDLYQPVDPGRRSDVALDIGAGIRATGVFLSPPGSTMYAPGERVVLTLELSRTTTDPGPCDADPCEIRVTLATSDGAPIAAWERPLIYDALRPADWDGAAIQHMHPIDLPVELPPGEYRLTVALRSGAELFTPPQRIAPIKVGDASGQLLGERGYFVPAPIFTFWLEAGGYEGPGDPLMPAVPFADGVVQCFLRACFHSAGNDITRLPIGELVLIGESGLRPAQPETGPSRFFPETGYTLHGTFLSAWEAYGGMETLGPPISSEMQRGAARVQYTRYARLERPEGTDIVLLANLGEEYLRLPGIPYRWR

Crispr_ID: NC_009767_42

• CRISPR_ID: NC_009767_42
• CRISPR_location: 2214286-2214401
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_42

Consensus_repeat	Method
GATGTGGTCGTACTGTTCAGCATCGGCGTCGTCCTCCTGAC	CRISPRCasFinder

spacers of NC_009767_42

>42.1|2214327|34|NC_009767|CRISPRCasFinder
CATGGAATACGTCATTGCGTGGATGACAACAGGG

CRISPR arrays and Neighbor proteins around NC_009767_42

CRISPR arrays

The CRISPR arrays of NC_009767_42

>merge|NC_009767|42|2214286-2214401|CRISPRCasFinder
GATGTGGTCGTACTGTTCAGCATCGGCGTCGTCCTCCTGACCATGGAATACGTCATTGCGTGGATGACAACAGGGATGCTGGTCGTACTGTTCAGCATCGGCGTCGTCCTCCTGAC

>NC_009767|42|36|2214286-2214401|CRISPRCasFinder
GATGTGGTCGTACTGTTCAGCATCGGCGTCGTCCTCCTGAC	CATGGAATACGTCATTGCGTGGATGACAACAGGG
ATGCTGGTCGTACTGTTCAGCATCGGCGTCGTCCTCCTGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_011997732.1|2211495_2212854_-|hypothetical-protein	unknown	unknown	gnl|CDD|379252
NC_009767.1|WP_012120226.1|2202945_2203395_+|prepilin-peptidase	unknown	unknown	gnl|CDD|227295
NC_009767.1|WP_012120236.1|2214791_2215151_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120228.1|2204274_2206113_+|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009767.1|WP_157042593.1|2214466_2214718_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120230.1|2208318_2209275_+|type-II-secretion-system-protein	unknown	unknown	gnl|CDD|227300
NC_009767.1|WP_012120240.1|2217300_2218182_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl|CDD|334323
NC_009767.1|WP_041330467.1|2206094_2208206_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NC_009767.1|WP_012120242.1|2219308_2220238_-|zinc-ABC-transporter-solute-binding-protein	unknown	unknown	gnl|CDD|238498
NC_009767.1|WP_012120244.1|2221448_2222324_-|DUF2085-domain-containing-protein	unknown	unknown	gnl|CDD|378277
NC_009767.1|WP_012120241.1|2218447_2219239_-|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224046
NC_009767.1|WP_012120227.1|2203538_2204360_+|IS5-family-transposase	unknown	unknown	gnl|CDD|379129
NC_009767.1|WP_012120237.1|2215272_2215650_+|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_083760295.1|2202441_2202924_+|TIGR04086-family-membrane-protein	unknown	unknown	gnl|CDD|274969
NC_009767.1|WP_012120243.1|2221107_2221434_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120233.1|2213513_2213840_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120232.1|2213038_2213359_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120231.1|2210468_2211554_+|hypothetical-protein	unknown	unknown	gnl|CDD|376743
NC_009767.1|WP_012120239.1|2216130_2217243_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl|CDD|224033
NC_009767.1|WP_157042594.1|2222596_2223475_+|sortase	unknown	unknown	gnl|CDD|377241

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_011997732.1|2211495_2212854_-|hypothetical-protein	gnl|CDD|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.71026e-24
NC_009767.1|WP_012120226.1|2202945_2203395_+|prepilin-peptidase	gnl|CDD|227295	COG4960, CpaA, Flp pilus assembly protein, protease CpaA [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	3.99031e-05
NC_009767.1|WP_012120228.1|2204274_2206113_+|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	4.22835e-117
NC_009767.1|WP_012120240.1|2217300_2218182_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl|CDD|334323	pfam00950, ABC-3, ABC 3 transport family.	4.82934e-56
NC_009767.1|WP_012120230.1|2208318_2209275_+|type-II-secretion-system-protein	gnl|CDD|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	9.92184e-29
NC_009767.1|WP_041330467.1|2206094_2208206_+|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.28804e-19
NC_009767.1|WP_012120242.1|2219308_2220238_-|zinc-ABC-transporter-solute-binding-protein	gnl|CDD|238498	cd01016, TroA, Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	2.61705e-139
NC_009767.1|WP_012120244.1|2221448_2222324_-|DUF2085-domain-containing-protein	gnl|CDD|378277	pfam09858, DUF2085, Predicted membrane protein (DUF2085). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.13999e-16
NC_009767.1|WP_012120241.1|2218447_2219239_-|metal-ABC-transporter-ATP-binding-protein	gnl|CDD|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	5.82015e-123
NC_009767.1|WP_012120227.1|2203538_2204360_+|IS5-family-transposase	gnl|CDD|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.35156e-23
NC_009767.1|WP_012120237.1|2215272_2215650_+|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	8.30369e-09
NC_009767.1|WP_083760295.1|2202441_2202924_+|TIGR04086-family-membrane-protein	gnl|CDD|274969	TIGR04086, hypothetical_protein, putative membrane protein, TIGR04086 family. Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. The function is unknown.	1.46273e-11
NC_009767.1|WP_012120239.1|2216130_2217243_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl|CDD|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	1.83091e-52
NC_009767.1|WP_012120231.1|2210468_2211554_+|hypothetical-protein	gnl|CDD|376743	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit. This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.	0.00353135
NC_009767.1|WP_157042594.1|2222596_2223475_+|sortase	gnl|CDD|377241	pfam04203, Sortase, Sortase family. The founder member of this family is S.aureus sortase, a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall.	3.84435e-35

Protein sequences

>NC_009767.1|WP_012120233.1|2213513_2213840_+|hypothetical-protein
MNPGKEVTTAGMVVGILALSIFGALVRVLLRLGEASPLCNDASFPLQAMAVWGDLLLLVIFPLGVGWWEFRKQIPRSALWRGLGIALLLLIAFYALFTAWRHPCVFGW
>NC_009767.1|WP_012120232.1|2213038_2213359_+|hypothetical-protein
MGQTYQSRAEPLERLIVFSIFAVVTYNLWGWAYERQLHLCGASGVNWEALFRDIAALVLLPIAVSLPPVCFWRDAQQWRSFRRGLIVPVVCLALHWTWHNLSCLLR
>NC_009767.1|WP_011997732.1|2211495_2212854_-|hypothetical-protein
MRNLPRAIIPVLRKFELLFSERVWEWAKILLIGAILAPGKRTVTSALRVMGLSDDAQFQNYHRVLNRAVWSPYAASRILLRLLVDAFVPSDTAIVLGLDDHIERRRGAKIKAKGIYRDPVRSSRSFFVKTSGLRWLCLMLLAPIPWAQRVWALPFLTVLAPSERYHQELGKRHKQLTDWARQIIFQVRQWLPERVLVVVADSSYAALELLAACQGLPNPVTVVTRLRLDAALYDTAYVHPAGRPGRPRKKGARQPTLEQRLSDPTTDWQHTSVRWYGGTTRTVRLASATAVWYHSGLPPVSIRWVLITDPDGKFEAQALLSTNPAATPKEIVEWFVMRWQVEVTFEEARAHLGIETQRQWSDLAILRTTPVLLGLFSLVTLFAHHLLQAGELPVRQAAWYTKALPTFSDTLAFVRKQLWPVTISWMSPAEADMVKIPKSLLVRLTDALAYAA
>NC_009767.1|WP_012120231.1|2210468_2211554_+|hypothetical-protein
MNARLNRRIWRHEGGAEAVEIIALIAVCIALLAAIGLGFNARGSDLGAAAVGTLTRFASEQSLNIGNVAIDGPDVQGPGISPITAPAVGIPRIVVQPPRISAPVQPQQSAYQPVQQAPAQQGSGNPLLDFWNSLTGWVQGAILGLAGAAVAVVAFLGLVAAGVITVASGVVLAAIAAVALAVGAIAGAIYVVATGRVDAWQIVLLGFGAASAVLIPIGLALRFPAVAAFFSSIPARIAALWSQRIAPWVRGVISNFWKWLHDREAVGAWLKKYGLPLALCSRALEEFVKGSYVEGFLIMLIITLVETFAKGNPAAYLVTFLIYPILKGIYGRYKARLYPSVPLTQHRRAHQSGEQVTTSGF
>NC_009767.1|WP_012120230.1|2208318_2209275_+|type-II-secretion-system-protein
MNPSGVEPAVLFGLCIFMLLVSGYHLVRALQAREQLIARAEDLGADPEVLSDPLRRQSFLVRWADRYDRSPQVQHLREQLRRAAVPWKPSDYYAIRVGVSFIVVIICWMMLDLPVFGAALVGAAAYFIVPRIFFFLRQNAYVRAFNKQLVEVTQLLANALRAGMSIQQAIGEVSERVPEPARSEFRQTHHELLLGDNLPLALHDMRRRVCSRDLDVLINAIVVQHQAGGNLVRVLNGMANTLNERQRLEREIDSLTSEARFSALVVMVLPIFFLLMIRDTPLGEALFQTVIGWVLLGVFAVVQVAVYFLIQRVARIEV
>NC_009767.1|WP_041330467.1|2206094_2208206_+|VWA-domain-containing-protein
MVQPIMTIVTERLVFPIRMPAVRMLWVAMLIAILLLPTSPATAQQTGQALDSGNSDVVLIIDNSGSMKQNDPQNLRLAAANLFIDLSDPRDKIGIVVLSDRMRTRSLTKNLVRIGSRQDIDELKGLVDALRNETKGQETHMGTALDLAYDLLDATPGSNRGANQRQFVVLLSDGLPTGVGQRERVDQAVQRFRERRYWKIFSIALGDEADPAYLDEKVSSPSGGQVVVARHAGELLDRYLDVYARAGDDRYINYVTVQPNTLAPLVDVRLDHQPTQIGVVLVRGDSNASISSLLAPDGADLVQPYYQNSVRRGAEPEYELYTAMSTDQVSLVGRWMINVDRPDALPTTIAVLSRSRLRIRMPAPAPLRDNEDTSLRYHPVGRPLLLVVGAQVAERNYDQHVTTPYLYRWVADMAPAAHMLTPFEGPPIVLVDDGRACDQRANDGRYSGVLPPFPTEGDYTLRLEFPGAHPNPIHVQKDYIVRVAALPTMTITLPPAATTLPINTPLTAWIDLPGRADFEIVNVMFPTAFVQRPDGVLETLEIESVDRGRFRFRYTPGFEGQYRINIAAEVHGRGAMGDIRYIDYADALIGVPKATPIVEISAAFTGTLVYDRRGILSVPLKIASRSPQEERLVITVTNPAGAITVPAEVLLQPNESIQRTISVRLPEKDRPARGALMLQLTAPEQRVIVQGETISVAIVRLPV
>NC_009767.1|WP_012120228.1|2204274_2206113_+|CpaF-family-protein
MTITRVTPKAGSTSPRSASSAAVSPKRREPGHSYHWTIGELLIPACERIVTIEDAAELRFHRTHPHVARLEARPPNVEGAGEVTIRQLVRNALRMRPDRIIVGEVRGAEALDMLQAMNTGHEGSMTTVHANSPRDAFSRLETMVMWAEGARELPLSAIREQLVGALDIVIQQTRLPNGRRKVISISEVQGIRHGEVELRDIFVFHSSVDDKGQVLGEFMATGALPRCLRKIEPACGALDHLFKSNYLRDTLGPEILQNPAITEIMVNGPFDVWIEERGKLRPAPEIRFRDHHHLLNVINTIIAPLNRRLDELNPMVDARLPDDERFPGGGRINAVLDPISLVGPVLTIRRFSHTPFTLDRLVALGSMSPQMAAFLRACVRIRRNMLISGGAGSGKTTLLGAIAKEIDLQRERIITIEDAAELRIGAPGDHVLGLETRPPDRFGEGEVTIRQLVRNALRMRPDRIIVGEVRGAEALDMLQAMNTGHEGSLTTLHANSPQEAFSRLETMVLWAREAEALSLSAIRRQLCTLDIVVQQARLADGSRKVVAIAEVVGLDERDQVHVEEIFRFEQHGIDPDGQVVGEHVATGYVPRVLEKLCAYGITLEEKAWCSRS
>NC_009767.1|WP_012120227.1|2203538_2204360_+|IS5-family-transposase
MGAPSQPAVQSETYATDLTDAQWEQIRPFVEIQAKTGPKRRVDLRAVLNGLLYKLKTGRQWELLPRSFPPKSTVHYSFQQWTKKGILVRINDALRRRVRVEAEGRENVEPTGGVIDAQSAKSSIAGGPERGFDGGKQVYGRKRHRLADTLGLLITACVHSARAYDGAAAKQVFTATKARGIALKKVWADQTYRGVLGPWMAANGMGELEIVERLPGQRGFQVQPKRWVVERTHAWLSGNRQLSREYDHNPRHSESWLYLASIRLLGRRLAKAS
>NC_009767.1|WP_012120226.1|2202945_2203395_+|prepilin-peptidase
MQYVMLTLMLAAAAVLVYVSITDIRERCIPNRVMFPALLTALLVALARPERWSLLLGGLVAGVLLVLPTLIYGLEKAGGGDVKLGLFIGLVLGWPAILPALGLAFVSATLFAAGGMLLRRLSWRSVIAFGPFLSLGGLLVGALLVLEQL
>NC_009767.1|WP_083760295.1|2202441_2202924_+|TIGR04086-family-membrane-protein
MTGNCGSQACAWRMVDCVSKTGCAAKERTMYRSDWLDDMRWGAVALGVATALTAQVAITLLVLNPLAITLIWTAVVLVELCIAVGAFVSGWRARRAALLNGLMAGLISAVVSLLATVVQAPAQVDLLNVLFLFVTFGLMGALGGVLAGYIRTRRLAQAHR
>NC_009767.1|WP_157042593.1|2214466_2214718_+|hypothetical-protein
MKRIFAIAAIVAFVAMIGALVLAAGPWRLLLIGLAGISGLVMSLARVMAFDTPSTRVQRAIAILYEVAFWLGLIGLALFSFTR
>NC_009767.1|WP_012120236.1|2214791_2215151_+|hypothetical-protein
MAKRIRLMADYAAYPLWWGEPDLVGNIDPSALPLSAETIARLMEWSARYDATLNKDDPAASGFPTDEEQRAFEDAGLELWRRVREELGAAYDVWYFSDRYQRLFSHPDELEAMMASSGE
>NC_009767.1|WP_012120237.1|2215272_2215650_+|nucleotidyltransferase-domain-containing-protein
MADADGPGAGAPLRVPQGMTPEQFRSFASAVRNGAGHLGSDIRVQGSRTAGTARPDSDIDIAIRVSPERFNQLIRERFGTPNPGSAKEHTMLHALEERFGYPVDISVIREGGPFDRGPWVPLPNE
>NC_009767.1|WP_012120239.1|2216130_2217243_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MSPLTEIILIAMVTAVACALPGAFLVLRRVAMISDAITHTVLLGIVLAFFVVRDTTSPLLVMAAATAGVATVALIELLNQTGRVREDAAIGLVFPFLFSIAVILIAQYAGNVHLDVDAVLLGELAFAPLDRYTLGDIDLGPRALWLMSGILGMSLLLLILFYKELKLATFDAALAATLGFMPTALHYGLMSVVSLTAVGAFNAVGSVLVVALMVAPPAAAYLLTDRLSHMLALSAIFGALAAILGCAAAFVLDTSLAGAMAVVSGLIFGVAWVFAPERGLVAQALRHARQRQEFAQAMLLVHLLHHEATPQARVECHPSHLSEHLRWNAAFTTQILHRAEQHGLLERQRDLIVLTESGRRLAVQTLGGEG
>NC_009767.1|WP_012120240.1|2217300_2218182_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MFNDLFFDYTLRTVALGSALLGIVSGMIGAFAVLRRQSLLGDAMSHAALPGIVLAFIVTGSKEPMALMIGAAFACWIGAMVVMSIVRTTRLKSDSALGLILATFFGAGLLLLTWVQKWPTAAQAGLDKYLFGQAATLLERDVVAMAVIGLPALLILALCWKECAILAFDPDFASSIGLPVRILDVLLTSLLVVAIIIGLQTVGAVLMSAMIVAPAAAARQWTDRLGVMVALSGIFGATAGVAGALLSSTAARLPTGPMIVVCISGLTLVSLLLAPQRGLVWAWVRNARPVAPS
>NC_009767.1|WP_012120241.1|2218447_2219239_-|metal-ABC-transporter-ATP-binding-protein
MTSEQLAIQVTDLTVAYRDKPVLWDIDLTVPGGVLMGIIGPNGAGKTTLLKTILGLIRPAAGQVLIYGKPYAEQRRLVAYVPQRSSVDWDFPASVLDVVMMGRYGALGWFRRPGKREHELAHEALTRVGMQEFAHRQISQLSGGQQQRVFLARALVQDAQVYFMDEPFQGVDATTERAIVGLLQDLRAAGKTVVVVHHDLQTVAEYFDWVALLNVRLVASGPVAEAFTEAALRAAYGGRIAFLEGQFPGAVAGEQRARIVVSP
>NC_009767.1|WP_012120242.1|2219308_2220238_-|zinc-ABC-transporter-solute-binding-protein
MKHFGLLLLMLVLVACASPGAPDGNLSDRPIRVVTTTGIVGDLVQNIGGERVSVISLMGPGVDPHVYKASARDVIRLQDADIIFYNGLHLEAAMGDVLERMQGRVRTVAVTAGIPRESLLPSDKYENLYDPHIWFDVTLWKRAAEHVRDALIDLDPSNASVYRANADNYIRQLDALHTYALEQSATIPAGQRVLITAHDAFRYFGRAYGFEVRGLQGISTATEAGAADVQALAEFIATRHIPAIFVETSVPQRTIEAVQAAVQERGFTVAIGGELFSDALGTPGTSEGTYIGMVRHNIDTIVRALRGAA
>NC_009767.1|WP_012120243.1|2221107_2221434_+|hypothetical-protein
MFRRKSLPQASHTMAPSEDELQRLHEQAVNRRYDLRVCNPAHGGFYAFMARYKDAADDPDALEQLAEEIVARQARLVHDAGLFESFGHLADLARWRARALRVRNGAPI
>NC_009767.1|WP_012120244.1|2221448_2222324_-|DUF2085-domain-containing-protein
MHDEPAASGEIPAEQIIAQAYALRAARAEAALAQRTAQERRWRIIFFFTLLALIAAVFFVPAPTLEKKLILVLSGVCAQQHNLVVGGIQLPLCARDTGMYLSLLTTLSVLTLYGRGKAGGLPPWPMLAILVGLVLTMAVDGINSTINEIGMTPWYEPRNDLRAATGMGAGVGLAVTLMLLFNRSLRRDVDETLPVVGQWRELGTIILIDAVLLAAILLDVGFLAWPLALLDVIGVSGTLFVTALTATAVVMNYDGTITRLAHLARPATFALILTGAFLAGMAWLRTALIGG
>NC_009767.1|WP_157042594.1|2222596_2223475_+|sortase
MRQPVTTQSDDETLLETLINAPLPPARLWQKPAVLRSLDEHRHQALSGYRLRTWVDHWLHRAERLFGIAALLIFGWWVVDGPVRDWWYAQQVTRHAPPVESAPRPMVVVRPPAAVERVIPADVPLPFTTPDMRQSPAEGFLAPRSPVEAVEEQGTPLPRRLIIPAIGLDTPVVEVFIVDGAWQVADYAAGYLHGTGLPGDPGNLALAGHAGLRGAVFRDLGRLTPGADIFVDAGTWRYQYRVRDMRDVWPTDVDVLDPTPTPTITLITCTNWDIQRLIVIGDLVGAQPLTGE

Crispr_ID: NC_009767_43

• CRISPR_ID: NC_009767_43
• CRISPR_location: 2238166-2238514
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers

Consensus repeat of NC_009767_43

Consensus_repeat	Method
GCGAGGCGCGAGGNGNGAGNGGCGAGGNGCGAGNGG	CRT

spacers of NC_009767_43

>43.1|2238202|42|NC_009767|CRT
GGCGCGACCATGGCGTAGCGCGAGATGTATCTCGCATTTGTA
>43.2|2238280|47|NC_009767|CRT
CTTGACCATGGCGTAGCGCGAGATTTATCTCGCATTTATAGCGAGGG
>43.3|2238363|40|NC_009767|CRT
GATGTATCTCGCATTTGTAGTGAGGCGCGAGGTGAGAGGG
>43.4|2238439|40|NC_009767|CRT
CGCGACCATGGCGTAGCGCAAGATGTATCTCGCATTTGTA

CRISPR arrays and Neighbor proteins around NC_009767_43

CRISPR arrays

The CRISPR arrays of NC_009767_43

>merge|NC_009767|43|2238166-2238514|CRT
TGCAGGCGTGAGGGGCGAGAGGCGAGGGGCGAGAGGGGCGCGACCATGGCGTAGCGCGAGATGTATCTCGCATTTGTAGCGAGGCGCGAGGTAAGAGGGGCGAGGCGCGAGGGGCTTGACCATGGCGTAGCGCGAGATTTATCTCGCATTTATAGCGAGGGGCGAGGCGCGAGGGGCGCGACCATGGCGTAGCGCAAGATGTATCTCGCATTTGTAGTGAGGCGCGAGGTGAGAGGGGCGAGGCGCGAGGTGAGAGGGGCGAGGCGCGAGGGGCGCGACCATGGCGTAGCGCAAGATGTATCTCGCATTTGTAGCGAGGCGCGAGGTGAGAGGGGCGAGGCGCGAGGGG

>NC_009767|43|6|2238166-2238514|CRT
TGCAGGCGTGAGGGGCGAGAGGCGAGGGGCGAGAGG	GGCGCGACCATGGCGTAGCGCGAGATGTATCTCGCATTTGTA
GCGAGGCGCGAGGTAAGAGGGGCGAGGCGCGAGGGG	CTTGACCATGGCGTAGCGCGAGATTTATCTCGCATTTATAGCGAGGG
GCGAGGCGCGAGGGGCGCGACCATGGCGTAGCGCAA	GATGTATCTCGCATTTGTAGTGAGGCGCGAGGTGAGAGGG
GCGAGGCGCGAGGTGAGAGGGGCGAGGCGCGAGGGG	CGCGACCATGGCGTAGCGCAAGATGTATCTCGCATTTGTA
GCGAGGCGCGAGGTGAGAGGGGCGAGGCGCGAGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_157042808.1|2249294_2249999_+|GDSL-family-lipase	unknown	unknown	gnl|CDD|239946
NC_009767.1|WP_012120251.1|2228967_2229411_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120248.1|2226463_2226994_-|ATP/GTP-binding-protein	unknown	unknown	gnl|CDD|225138
NC_009767.1|WP_049768895.1|2235563_2236322_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|378400
NC_009767.1|WP_012120258.1|2239996_2240476_+|phosphohistidine-phosphatase-SixA	unknown	unknown	gnl|CDD|224973
NC_009767.1|WP_041330476.1|2240700_2242158_-|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NC_009767.1|WP_012120255.1|2232438_2235513_-|FAD-binding-oxidoreductase	unknown	unknown	gnl|CDD|223325
NC_009767.1|WP_012120257.1|2236455_2237994_-|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl|CDD|234614
NC_009767.1|WP_012120254.1|2231120_2232071_-|mevalonate-kinase	unknown	unknown	gnl|CDD|224493
NC_009767.1|WP_012120261.1|2245384_2245777_-|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	unknown	unknown	gnl|CDD|319903
NC_009767.1|WP_012120265.1|2250210_2250939_+|esterase-family-protein	unknown	unknown	gnl|CDD|227283
NC_009767.1|WP_012120250.1|2227872_2228814_-|DUF1385-domain-containing-protein	unknown	unknown	gnl|CDD|377780
NC_009767.1|WP_012120260.1|2244566_2245151_-|metal-binding-protein	unknown	unknown	gnl|CDD|370771
NC_009767.1|WP_012120249.1|2227020_2227842_-|DUF4388-domain-containing-protein	unknown	unknown	gnl|CDD|373017
NC_009767.1|WP_012120263.1|2248595_2249225_-|peptidase-S16	unknown	unknown	gnl|CDD|366967
NC_009767.1|WP_041330478.1|2242421_2242889_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330481.1|2247204_2248611_+|transcriptional-regulator	unknown	unknown	gnl|CDD|225420
NC_009767.1|WP_041331879.1|2229738_2230854_-|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl|CDD|234664
NC_009767.1|WP_012120252.1|2229473_2229722_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042595.1|2242986_2243124_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120261.1|2245384_2245777_-|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	gnl|CDD|319903	cd07238, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.75927e-12
NC_009767.1|WP_012120248.1|2226463_2226994_-|ATP/GTP-binding-protein	gnl|CDD|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	4.08921e-57
NC_009767.1|WP_049768895.1|2235563_2236322_-|helix-turn-helix-domain-containing-protein	gnl|CDD|378400	pfam10114, PocR, Sensory domain found in PocR. PocR, a ligand binding domain, has a novel variant of the PAS-like Fold. Evidence suggests that it binds small hydrocarbon derivatives such as 1,3-propanediol. In (Natural history of sensor domains in bacterial signaling systems by Aravind L, LM Iyer, Anantharaman V, from 'Sensory Mechanisms in Bacteria: Molecular Aspects of Signal Recognition.' Caister Academic Press. 2010) - see (http://de.scribd.com/doc/28576661/Bacterial-Signaling-Chapter).	9.17401e-39
NC_009767.1|WP_012120258.1|2239996_2240476_+|phosphohistidine-phosphatase-SixA	gnl|CDD|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	9.25919e-35
NC_009767.1|WP_041330476.1|2240700_2242158_-|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	1.48356e-08
NC_009767.1|WP_012120255.1|2232438_2235513_-|FAD-binding-oxidoreductase	gnl|CDD|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	4.32067e-65
NC_009767.1|WP_012120257.1|2236455_2237994_-|glutamine-hydrolyzing-GMP-synthase	gnl|CDD|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NC_009767.1|WP_012120254.1|2231120_2232071_-|mevalonate-kinase	gnl|CDD|224493	COG1577, ERG12, Mevalonate kinase [Lipid metabolism].	2.17445e-79
NC_009767.1|WP_012120265.1|2250210_2250939_+|esterase-family-protein	gnl|CDD|227283	COG4947, COG4947, Uncharacterized protein conserved in bacteria [Function unknown].	3.68536e-81
NC_009767.1|WP_012120250.1|2227872_2228814_-|DUF1385-domain-containing-protein	gnl|CDD|377780	pfam07136, DUF1385, Protein of unknown function (DUF1385). This family contains a number of hypothetical bacterial proteins of unknown function approximately 300 residues in length. Some family members are predicted to be metal-dependent.	2.99723e-116
NC_009767.1|WP_012120260.1|2244566_2245151_-|metal-binding-protein	gnl|CDD|370771	pfam09988, DUF2227, Uncharacterized metal-binding protein (DUF2227). Members of this family of hypothetical bacterial proteins possess metal binding properties; however, their exact function has not, as yet, been determined.	7.88652e-48
NC_009767.1|WP_012120249.1|2227020_2227842_-|DUF4388-domain-containing-protein	gnl|CDD|373017	pfam14332, DUF4388, Domain of unknown function (DUF4388). This domain family is found in bacteria, and is typically between 102 and 135 amino acids in length.	5.89993e-22
NC_009767.1|WP_012120263.1|2248595_2249225_-|peptidase-S16	gnl|CDD|366967	pfam02190, LON_substr_bdg, ATP-dependent protease La (LON) substrate-binding domain. This domain has been shown to be part of the PUA superfamily. This domain represents a general protein and polypeptide interaction domain for the ATP-dependent serine peptidase, LON, Peptidase_S16, pfam05362. ATP-dependent Lon proteases are conserved in all living organisms and catalyze rapid turnover of short-lived regulatory proteins and many damaged or denatured proteins.	4.63663e-32
NC_009767.1|WP_157042808.1|2249294_2249999_+|GDSL-family-lipase	gnl|CDD|239946	cd04502, SGNH_hydrolase_like_7, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	1.55929e-87
NC_009767.1|WP_041330481.1|2247204_2248611_+|transcriptional-regulator	gnl|CDD|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	8.12745e-84
NC_009767.1|WP_041331879.1|2229738_2230854_-|tRNA-2-thiouridine(34)-synthase-MnmA	gnl|CDD|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0

Protein sequences

>NC_009767.1|WP_012120257.1|2236455_2237994_-|glutamine-hydrolyzing-GMP-synthase
MHESIPVLDFGSQTAQLIVRRLRELGVYSELLPHDTPEADVWALQPRGIVLSGGPASVYEPGAPQLPPWLLESDLPVLGICYGMQLQAHTLGGRVEGMQSREFGPAEITVVDPDLLFADMPTQQQVWMSHGDHIAALPPGFRVLAHSPGAPFAAAGDDRRRWYGIQFHPEVVHTRFGRDILRNFAFRICKCRGDWQPENFVAEAIERVRAQVGDGRVICALSGGVDSAVAALIVHHAIGDRLTCVFVDNGLLRQGEAEQVVATFREHFHIPLIAVDAADEFLEALAGVADPEQKRTIIGEKFVRIFEREARRIEGARFLAQGTLYPDVIESRAPDRQKGVTIKTHHNVGGLPADMQLTLVEPLRYLFKDEVRAAGHALGLPDEWVWRHPFPGPGLAVRVLGPVTRERLATLRAADAIFMQELRIAGLYRATQQAFAVLLPVRSVGVMGDGRTYADVVALRAVTTEDYMTADWARLPAELLARVSSRIVNEVPGVNRVVYDISSKPPATIEWE
>NC_009767.1|WP_049768895.1|2235563_2236322_-|helix-turn-helix-domain-containing-protein
MTTREVQDLLKLDRTTVYRMLKEGRLTGVKVGQQWRFHRRAVETLLQGASPAAASRSAPADAPRYAQPLTPVPLPLHCVQAIQDVFADLTRVGVVTTATDGEPLTRMSNGCRFCALIQATDAGRAACRASWRALAARSDRTPRIATCHAGLKYIHARIEVDGLPTAMLIAGQFRVDATPLDTQRLARDVGVDPGALDEALDAVTILDERMRAQLGVWLQKVAHTFEEIGRERATMISRLRAISDLAVLDRPD
>NC_009767.1|WP_012120255.1|2232438_2235513_-|FAD-binding-oxidoreductase
MKADNLSFLHRFGERVSFDRIERKLYGHDIAAIPGLVTPLLGDTLPDAVVQPQNEEELIELARWASANRVPLTPRGKATSGYGGAVPLRKGVVVDFYRMRTVLHIDAADQTVTVEPGITWEQLDRTLKREGLTLRLYPTSYPSSTVGGWLAQGGAGIGSYEFGYFRENVVSARLVLPSGEVRDLRDADLDLVADAEGITGMISQVTLRVMRLTGIQTLALAVYDAYAFQLLLQALIDRRLPIWSMSFINPKMAEMKNEAPLREHHGHPVEQRIILPKAYILTLAFRDADATAVQSAIPGIAAATGAEILSDEIARHEWDGRFKLMTIKRLSPSLVPAEVIVPLDRLADTLDAYNRLVAQPLVKEGVVIRLGVDGSPEVVILGFIPADQRSFSYNLVFGLALTVMNIAIKNGGRPYATGIYFARKADQALGKARAAQLKAFKSRIDPAGVMNPGKVFGGGAVGAFVDLASRFEPLVRRFGNAVPVTIGERPTGPVRDIPADVAWYAYACSQCGYCIDECDQFYGRGWESQSPRGKWFWLREYMEGREQWNQRMVDTFIACTTCEMCNLRCSANLPIEPAWMKLRGQLITEQKKMTFPPFEMMSAALTAQGNIWAGYRERRDAWFPKDLNERHGPDHRAKNVYFAGCTASYVEQDIGIASVRLLDAAGVDFTYLGPKENCCATPMLVAGRWDLFVETMKKNIAAVKAAGADTVISSCPACDMMWRHVYPAWAKKLGIEYNITAKHYSEIVAEKIHASEFAFPQTNRAPVTVTWHDSCHIGRVSGVYEPPRDLIKSVPNVHFVEMASNRDCGKCCGSVLTLIKEPDVAADLGKTRIDEALDIGAEKILALCPCCEFQLRVSAEKKRLPVEVVDLAHFAAEALGYELPDPNPEVRAQWAVFEAMIKLMTPEGFASLMTTMWPEMIDAMPLGMGRMMRAMGRVPGALEAMKPLFPILFPRLLPLMMPKLMPAMLARVGAMIPMPDYMAEQMPVLMPKVVDRLMPHMIGDVVPLVTQPLIDYLHEQARLN
>NC_009767.1|WP_012120254.1|2231120_2232071_-|mevalonate-kinase
MQSHTSAPGKIILCGEHAVVYGRPAIALPLSKIRARASVAPGAAGIGIRFDAPNLGRRWLLAAAPGDPLSELTLATLKQLGITRIPDIQITITSDIPIASGMGSGAAIATAIVRALATAFGRNLSAAEISALVYASEQRYHGTPSGIDNTVIAYEQAIWFQRRSEPPHLIEPLPIAAPFTLVIGDTGVRSATRLPVGEVRRRWQEDPARYEALFDLVADVVHQARHALARGDVATLGPLLDRNQEALEQIGVSSPELERLITAARRAGAAGAKLSGGGWGGVMIALVDPETVVSVREALLAVGAARVLETTVSASA
>NC_009767.1|WP_041331879.1|2229738_2230854_-|tRNA-2-thiouridine(34)-synthase-MnmA
MAKIMIAMSGGVDSSLAAALLHEAGHDVTGVTLHLWEGDDDRLAESLCCSQEMTESARRVCAQLGIPYYVFNYQREFRRSVIEYFLREYASGFTPNPCLECNREIKFRALLARARALGFDYVATGHYARIRVDKTPADHSASPSPNGAQRAVYRLLRAVDEEKDQSYMLYMLGQDDLARLMFPIGEYTKAEVRALAAARGLASANRPESQDICFVPGGDYRNLLREERPDALRPGPILDLEGREVGRHQGLPLYTIGQRRGLGIATGQPMYVMALDVARNAVIVGPESALRRTTLRAERVTFVSGSWPEAPFDCLAQIRAHADAVPARVTPVEPERVEVRFEHPQRAITPGQAIVFYDGAVVLGGGRIARD
>NC_009767.1|WP_012120252.1|2229473_2229722_-|hypothetical-protein
MPPDLLLILLIVTVSAALAHLLWGRRWVQIPVFWLAATGGALIALALDARLPLRLITPAGVPVLETTLGAWVMLIVASRLRL
>NC_009767.1|WP_012120251.1|2228967_2229411_-|hypothetical-protein
MGRWIGIGLTLVLLIIVGFIVGAYLSPDFRIASRDIAIVVLAVFQMISALISIALLLVLVYAVRTLTRVSRTSLIPKLEEVSVKLDQVLEQGRGVAANLRDTTRTVSGTTSFLADRAIAPVIRVSGLMAGVRAAAAYLARRDDEQAS
>NC_009767.1|WP_012120250.1|2227872_2228814_-|DUF1385-domain-containing-protein
MSEQSFSYGGQAVLEGVMMRGLRQATVAVRTPSGEIVFRHEPLNVERRRMWETLPFLRGILMLWDTLSLGIRALNFSASAALGEEEQPQSKGAIALTLIVSLAFAFGLFFVAPLLIASLIERLGATPLMRDAAEGFIQLAIFIGYLTLIGRMPDIQRTFGYHGAEHKTINAYEAGAPLTVESVRSFSLLHPRCGTSFLLVVVVLSIPFFALFSSLPLSERLLSRIILVPVIAAVSYELLRLSAANFHRGWVRRLIAPSLALQRLTTREPDDTMIAVAIAALIPALAADGVVPAAFDASLAHGVARPPADAALA
>NC_009767.1|WP_012120249.1|2227020_2227842_-|DUF4388-domain-containing-protein
MPLVGNIRDFGLSDFLYLVDRGYKTGCLHLSRADELASLYFEKGKLITATRKDDNVPVTELLVRKGKLTPVQAAQAAQAHQSQNGVSLSQVLVNLELIGRDELQRILQQHIEESVYALFGWNEGEFRFEQGQRPEPTAPIMPTPLAVEHLIMEGVRRIDEWGRIKDRIPNTDLIVRFIEQPIERTKGINLAADEWRVFARINGKDTLAEIARKTGMSEFDVCRIVYGFLTAGLVDVIRKPAPVPMLATGRPLAEAPRVKKSLVTRIINRIRGM
>NC_009767.1|WP_012120248.1|2226463_2226994_-|ATP/GTP-binding-protein
MQTVKMVISGAVNAGKTEFIKTISEIEVVSTERPATDDTRLIKKETTVAMDFGRIAIGDDLVLHLFGTPGQKRFDFMWEILSEGMLGLVILVDSTRPETFRETNRIIDFFMSYRETPYVVAANKQDRPNAWSPEELRLALRLPSHIKVLPCMATERESVKNVLLELLDVIMQRSED
>NC_009767.1|WP_012120258.1|2239996_2240476_+|phosphohistidine-phosphatase-SixA
MELYLLRHAIAEERSNDGSDSARMLTPEGAEKMRIGARGLRRLGVAIDRLLTSPLTRARETAEIVGAALDVAPETVGALAPGCNAATLIDLLADMPRAKSVMVVGHEPDLSSMIADLTGGSRVVMKKGGLALIDLSSFELSAGSLLWVLPPKVLRALGK
>NC_009767.1|WP_041330476.1|2240700_2242158_-|hypothetical-protein
MHRKPFFQTVSLLILVLLMVSCGGAPSPAAGFPSPTAVPSEPTITAPPTPILAPTPETPPATSLPEPTSAPPATSQPEPTPIPSPQPTVAPPPPTATPTPAPPTPVPPTSSFTGILFFLRDGALWIFDAGGERLIVDQVREFTPSANGNVIAVVREVERQFDVWTVRRDGSDLRRITNDRSVEASLSWSPDNAALIFAAADASEFLPQTWPDRALWCSAGQIVVLDIASGQRQALANGCDPALSPDGRRIAYSAPPTLRDPAIAGGAPVAGNAIRLINRRGENTWNFARADGADAPAPNTGMLVYAPAWSPDGASVAYHRYVGMQIEVDVNLSEIGGSFEGKGRPFAEGAGWLLPSRFAPDGRRTAIIEHNYSDARGFGGYDDWSVQVVALDGLRTVDLPQGSVTMLGGSATRLPRAASAAWSPDGTLLAVLLPPGWRPDVPLNEPFDPSGAESPGEVWLWQPGVAPSIRLISNVDFASPLAWLP
>NC_009767.1|WP_041330478.1|2242421_2242889_+|hypothetical-protein
MKQTQTTMTPTNPQSLDQNAEKTQSTFGSAAQHSSRRPSQPRIVLQPVVLDDMATSTPDIPRLEDMTESEIGHKTRDVEEEQRNPVQARSVANILRADRRKRRSHDGTDQTRMMLLDYRISLPGRSVIIGALFICGVIAVALFVTLLLAAKAPIV
>NC_009767.1|WP_157042595.1|2242986_2243124_+|hypothetical-protein
MTIGQQFDAALVVWMHVCVQQCQRRMRLPVYPTPLAGDVALQWRA
>NC_009767.1|WP_012120260.1|2244566_2245151_-|metal-binding-protein
MPDTPTHDIITVATGALLAPATYALLESNGRDYAATGATVLTGAHLISGLLFSPDLDIDSAIDNRWGIFFWIWRPYMWIIPHRHFWSHSLIIAPLLRLVYFSVVTMLIVIWGTWLLGYAGLGSSDLHAQAPAWIFDLMRRNPDMVRLFLFGFISGSAAHTIADWLVTGGRRYLHLAGIRLRSDYRNHDRARRHR
>NC_009767.1|WP_012120261.1|2245384_2245777_-|glyoxalase/bleomycin-resistance/dioxygenase-family-protein
MRPASFEQFVTFIYVRDLNASAAFYGDLLGLPLALDQGTCRIYCVASDAYLGVCQRNDTTAPPMPGSLILTLVTHDVDEWHRYLADRGVTVAQPPQYNPHFNIYHCFLRDPDGHLVEIQRFLDPAWPRAR
>NC_009767.1|WP_041330481.1|2247204_2248611_+|transcriptional-regulator
MDIHEQAITDLLAQAEGERVACVRANVRPIDLAQTMAAMANASGGTILIGVRGRQVEGVADVDAARAMAFDAALACLPPLVLPLPVVVTHNGATLLIVTVPSGLPHVYSVGGTYLRREGSANVPLAPDALRHLLIERGETSWDRMAPPDATLADLDAEKIAAYARRVGPIAEADPLAFLLRRGCLMQRSGTATGKTEFVPTNAGLLLFGVEIERWFPQAEVTLVRYQGREMSDAFLREDIRDTLPETARRAERWLIEHMRRGSRMVGLEREDWTQFPLGAVREALINALAHRDYTIRGDSIRVLLFSDRLECYSPGRLPGHVTLQNLVEERFSRNATLVQALADLGLIERLGYGIDRMLRQMADAGLPPPEFRETTAGFLVTLYGRTGDDRADAGGADVAAWRRMGLNERQIAALLFLAEHQRITNRDMQELAPDVSAETLRRDLVDLVERGLLLRVGDKRGAYYILK
>NC_009767.1|WP_012120263.1|2248595_2249225_-|peptidase-S16
MTHTSHNLTAELPLLALRGIVVFPPSVVPVAVSRPAAIRLVDDAVISGGLVAVSAQRGDDPDQCYAIGALARLHRLVRLHDGTLRIALQALERIAIEQVTQREPYLRALVHVLPDHINASDIATRMQEARARARELLDALPPNEEVRTQLESADDPRHLAALLASMLLVRANLAERQALLEIADVSERLVRISALLTHELDILRRHFRI
>NC_009767.1|WP_157042808.1|2249294_2249999_+|GDSL-family-lipase
MKHARTVHSWGGLCFLLASHPARNGRRRIVVEWYEPEVQELEQLNKSAPPPAGAVLFYGSSSLRLWTTLGEDMAPWTVVNRAFGGSTLAACVHFFDRLVIPCAPGSIVLYAGDNDLGDGRAPDDVVRSLRAMLARIDAALGSIPVAYMSIKPSPARWSLRDRIQRVNEAARALMEHRPSGYYIDVYTSMLGPDGRPRAELFDADGLHLSARGYQVWTHILRPYVAVLSGVQREP
>NC_009767.1|WP_012120265.1|2250210_2250939_+|esterase-family-protein
MQREYYLWWSPRLQRDMEMLVIGHAGARVLVFPTRAGRFYDYENWGLVETLRPSIEQGFLQLYCVDSVDRESLYAFHRPPQERIARHVQYESYILDEVLSLSRQLNPNPFVIAHGCSLGAYHAVNIAFRHPHLFHKVVALSGRYDLTVATGSFRALFDGYYDDTIYFHTPCHFIPRLTDPSILAHLRRMEITLVIGEEDPFIWTNHALSAALWEKDIPHALHIWPGEAHRIEHWREMIRHYL

Crispr_ID: NC_009767_44

• CRISPR_ID: NC_009767_44
• CRISPR_location: 2243183-2243295
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_44

Consensus_repeat	Method
CCTGCACCGTATATCGCTGCCTGTGAGTTACCCTGCCAC	CRISPRCasFinder

spacers of NC_009767_44

>44.1|2243222|35|NC_009767|CRISPRCasFinder
TGACCGGCGTGCTGCGTGCCCCACCGAAGCGCTCA

CRISPR arrays and Neighbor proteins around NC_009767_44

CRISPR arrays

The CRISPR arrays of NC_009767_44

>merge|NC_009767|44|2243183-2243295|CRISPRCasFinder
CCTGCACCGTATATCGCTGCCTGTGAGTTACCCTGCCACTGACCGGCGTGCTGCGTGCCCCACCGAAGCGCTCACCTGCACCGTATATCGCCGCCTGTGAGTTACCCTGCCAC

>NC_009767|44|37|2243183-2243295|CRISPRCasFinder
CCTGCACCGTATATCGCTGCCTGTGAGTTACCCTGCCAC	TGACCGGCGTGCTGCGTGCCCCACCGAAGCGCTCA
CCTGCACCGTATATCGCCGCCTGTGAGTTACCCTGCCAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_157042808.1|2249294_2249999_+|GDSL-family-lipase	unknown	unknown	gnl|CDD|239946
NC_009767.1|WP_012120267.1|2252886_2253480_+|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl|CDD|234720
NC_009767.1|WP_012120261.1|2245384_2245777_-|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	unknown	unknown	gnl|CDD|319903
NC_009767.1|WP_012120260.1|2244566_2245151_-|metal-binding-protein	unknown	unknown	gnl|CDD|370771
NC_009767.1|WP_049768895.1|2235563_2236322_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|378400
NC_009767.1|WP_012120268.1|2253486_2254743_-|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_009767.1|WP_012120258.1|2239996_2240476_+|phosphohistidine-phosphatase-SixA	unknown	unknown	gnl|CDD|224973
NC_009767.1|WP_041330476.1|2240700_2242158_-|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NC_009767.1|WP_012120255.1|2232438_2235513_-|FAD-binding-oxidoreductase	unknown	unknown	gnl|CDD|223325
NC_009767.1|WP_012120257.1|2236455_2237994_-|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl|CDD|234614
NC_009767.1|WP_012120254.1|2231120_2232071_-|mevalonate-kinase	unknown	unknown	gnl|CDD|224493
NC_009767.1|WP_012120269.1|2254754_2255690_-|TIGR01777-family-protein	unknown	unknown	gnl|CDD|187553
NC_009767.1|WP_012120265.1|2250210_2250939_+|esterase-family-protein	unknown	unknown	gnl|CDD|227283
NC_009767.1|WP_012120266.1|2251572_2252871_+|hypothetical-protein	unknown	unknown	gnl|CDD|223679
NC_009767.1|WP_012120263.1|2248595_2249225_-|peptidase-S16	unknown	unknown	gnl|CDD|366967
NC_009767.1|WP_041330478.1|2242421_2242889_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330481.1|2247204_2248611_+|transcriptional-regulator	unknown	unknown	gnl|CDD|225420
NC_009767.1|WP_041331879.1|2229738_2230854_-|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl|CDD|234664
NC_009767.1|WP_012120252.1|2229473_2229722_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042595.1|2242986_2243124_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120261.1|2245384_2245777_-|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	gnl|CDD|319903	cd07238, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.75927e-12
NC_009767.1|WP_012120260.1|2244566_2245151_-|metal-binding-protein	gnl|CDD|370771	pfam09988, DUF2227, Uncharacterized metal-binding protein (DUF2227). Members of this family of hypothetical bacterial proteins possess metal binding properties; however, their exact function has not, as yet, been determined.	7.88652e-48
NC_009767.1|WP_049768895.1|2235563_2236322_-|helix-turn-helix-domain-containing-protein	gnl|CDD|378400	pfam10114, PocR, Sensory domain found in PocR. PocR, a ligand binding domain, has a novel variant of the PAS-like Fold. Evidence suggests that it binds small hydrocarbon derivatives such as 1,3-propanediol. In (Natural history of sensor domains in bacterial signaling systems by Aravind L, LM Iyer, Anantharaman V, from 'Sensory Mechanisms in Bacteria: Molecular Aspects of Signal Recognition.' Caister Academic Press. 2010) - see (http://de.scribd.com/doc/28576661/Bacterial-Signaling-Chapter).	9.17401e-39
NC_009767.1|WP_012120268.1|2253486_2254743_-|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	6.80942e-97
NC_009767.1|WP_012120258.1|2239996_2240476_+|phosphohistidine-phosphatase-SixA	gnl|CDD|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	9.25919e-35
NC_009767.1|WP_041330476.1|2240700_2242158_-|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	1.48356e-08
NC_009767.1|WP_012120255.1|2232438_2235513_-|FAD-binding-oxidoreductase	gnl|CDD|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	4.32067e-65
NC_009767.1|WP_012120257.1|2236455_2237994_-|glutamine-hydrolyzing-GMP-synthase	gnl|CDD|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NC_009767.1|WP_012120254.1|2231120_2232071_-|mevalonate-kinase	gnl|CDD|224493	COG1577, ERG12, Mevalonate kinase [Lipid metabolism].	2.17445e-79
NC_009767.1|WP_012120269.1|2254754_2255690_-|TIGR01777-family-protein	gnl|CDD|187553	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8. This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.14457e-136
NC_009767.1|WP_012120265.1|2250210_2250939_+|esterase-family-protein	gnl|CDD|227283	COG4947, COG4947, Uncharacterized protein conserved in bacteria [Function unknown].	3.68536e-81
NC_009767.1|WP_012120266.1|2251572_2252871_+|hypothetical-protein	gnl|CDD|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	6.31064e-07
NC_009767.1|WP_012120263.1|2248595_2249225_-|peptidase-S16	gnl|CDD|366967	pfam02190, LON_substr_bdg, ATP-dependent protease La (LON) substrate-binding domain. This domain has been shown to be part of the PUA superfamily. This domain represents a general protein and polypeptide interaction domain for the ATP-dependent serine peptidase, LON, Peptidase_S16, pfam05362. ATP-dependent Lon proteases are conserved in all living organisms and catalyze rapid turnover of short-lived regulatory proteins and many damaged or denatured proteins.	4.63663e-32
NC_009767.1|WP_157042808.1|2249294_2249999_+|GDSL-family-lipase	gnl|CDD|239946	cd04502, SGNH_hydrolase_like_7, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	1.55929e-87
NC_009767.1|WP_041330481.1|2247204_2248611_+|transcriptional-regulator	gnl|CDD|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	8.12745e-84
NC_009767.1|WP_041331879.1|2229738_2230854_-|tRNA-2-thiouridine(34)-synthase-MnmA	gnl|CDD|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NC_009767.1|WP_012120267.1|2252886_2253480_+|leucyl/phenylalanyl-tRNA--protein-transferase	gnl|CDD|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	8.85097e-112

Protein sequences

>NC_009767.1|WP_157042595.1|2242986_2243124_+|hypothetical-protein
MTIGQQFDAALVVWMHVCVQQCQRRMRLPVYPTPLAGDVALQWRA
>NC_009767.1|WP_041330478.1|2242421_2242889_+|hypothetical-protein
MKQTQTTMTPTNPQSLDQNAEKTQSTFGSAAQHSSRRPSQPRIVLQPVVLDDMATSTPDIPRLEDMTESEIGHKTRDVEEEQRNPVQARSVANILRADRRKRRSHDGTDQTRMMLLDYRISLPGRSVIIGALFICGVIAVALFVTLLLAAKAPIV
>NC_009767.1|WP_041330476.1|2240700_2242158_-|hypothetical-protein
MHRKPFFQTVSLLILVLLMVSCGGAPSPAAGFPSPTAVPSEPTITAPPTPILAPTPETPPATSLPEPTSAPPATSQPEPTPIPSPQPTVAPPPPTATPTPAPPTPVPPTSSFTGILFFLRDGALWIFDAGGERLIVDQVREFTPSANGNVIAVVREVERQFDVWTVRRDGSDLRRITNDRSVEASLSWSPDNAALIFAAADASEFLPQTWPDRALWCSAGQIVVLDIASGQRQALANGCDPALSPDGRRIAYSAPPTLRDPAIAGGAPVAGNAIRLINRRGENTWNFARADGADAPAPNTGMLVYAPAWSPDGASVAYHRYVGMQIEVDVNLSEIGGSFEGKGRPFAEGAGWLLPSRFAPDGRRTAIIEHNYSDARGFGGYDDWSVQVVALDGLRTVDLPQGSVTMLGGSATRLPRAASAAWSPDGTLLAVLLPPGWRPDVPLNEPFDPSGAESPGEVWLWQPGVAPSIRLISNVDFASPLAWLP
>NC_009767.1|WP_012120258.1|2239996_2240476_+|phosphohistidine-phosphatase-SixA
MELYLLRHAIAEERSNDGSDSARMLTPEGAEKMRIGARGLRRLGVAIDRLLTSPLTRARETAEIVGAALDVAPETVGALAPGCNAATLIDLLADMPRAKSVMVVGHEPDLSSMIADLTGGSRVVMKKGGLALIDLSSFELSAGSLLWVLPPKVLRALGK
>NC_009767.1|WP_012120257.1|2236455_2237994_-|glutamine-hydrolyzing-GMP-synthase
MHESIPVLDFGSQTAQLIVRRLRELGVYSELLPHDTPEADVWALQPRGIVLSGGPASVYEPGAPQLPPWLLESDLPVLGICYGMQLQAHTLGGRVEGMQSREFGPAEITVVDPDLLFADMPTQQQVWMSHGDHIAALPPGFRVLAHSPGAPFAAAGDDRRRWYGIQFHPEVVHTRFGRDILRNFAFRICKCRGDWQPENFVAEAIERVRAQVGDGRVICALSGGVDSAVAALIVHHAIGDRLTCVFVDNGLLRQGEAEQVVATFREHFHIPLIAVDAADEFLEALAGVADPEQKRTIIGEKFVRIFEREARRIEGARFLAQGTLYPDVIESRAPDRQKGVTIKTHHNVGGLPADMQLTLVEPLRYLFKDEVRAAGHALGLPDEWVWRHPFPGPGLAVRVLGPVTRERLATLRAADAIFMQELRIAGLYRATQQAFAVLLPVRSVGVMGDGRTYADVVALRAVTTEDYMTADWARLPAELLARVSSRIVNEVPGVNRVVYDISSKPPATIEWE
>NC_009767.1|WP_049768895.1|2235563_2236322_-|helix-turn-helix-domain-containing-protein
MTTREVQDLLKLDRTTVYRMLKEGRLTGVKVGQQWRFHRRAVETLLQGASPAAASRSAPADAPRYAQPLTPVPLPLHCVQAIQDVFADLTRVGVVTTATDGEPLTRMSNGCRFCALIQATDAGRAACRASWRALAARSDRTPRIATCHAGLKYIHARIEVDGLPTAMLIAGQFRVDATPLDTQRLARDVGVDPGALDEALDAVTILDERMRAQLGVWLQKVAHTFEEIGRERATMISRLRAISDLAVLDRPD
>NC_009767.1|WP_012120255.1|2232438_2235513_-|FAD-binding-oxidoreductase
MKADNLSFLHRFGERVSFDRIERKLYGHDIAAIPGLVTPLLGDTLPDAVVQPQNEEELIELARWASANRVPLTPRGKATSGYGGAVPLRKGVVVDFYRMRTVLHIDAADQTVTVEPGITWEQLDRTLKREGLTLRLYPTSYPSSTVGGWLAQGGAGIGSYEFGYFRENVVSARLVLPSGEVRDLRDADLDLVADAEGITGMISQVTLRVMRLTGIQTLALAVYDAYAFQLLLQALIDRRLPIWSMSFINPKMAEMKNEAPLREHHGHPVEQRIILPKAYILTLAFRDADATAVQSAIPGIAAATGAEILSDEIARHEWDGRFKLMTIKRLSPSLVPAEVIVPLDRLADTLDAYNRLVAQPLVKEGVVIRLGVDGSPEVVILGFIPADQRSFSYNLVFGLALTVMNIAIKNGGRPYATGIYFARKADQALGKARAAQLKAFKSRIDPAGVMNPGKVFGGGAVGAFVDLASRFEPLVRRFGNAVPVTIGERPTGPVRDIPADVAWYAYACSQCGYCIDECDQFYGRGWESQSPRGKWFWLREYMEGREQWNQRMVDTFIACTTCEMCNLRCSANLPIEPAWMKLRGQLITEQKKMTFPPFEMMSAALTAQGNIWAGYRERRDAWFPKDLNERHGPDHRAKNVYFAGCTASYVEQDIGIASVRLLDAAGVDFTYLGPKENCCATPMLVAGRWDLFVETMKKNIAAVKAAGADTVISSCPACDMMWRHVYPAWAKKLGIEYNITAKHYSEIVAEKIHASEFAFPQTNRAPVTVTWHDSCHIGRVSGVYEPPRDLIKSVPNVHFVEMASNRDCGKCCGSVLTLIKEPDVAADLGKTRIDEALDIGAEKILALCPCCEFQLRVSAEKKRLPVEVVDLAHFAAEALGYELPDPNPEVRAQWAVFEAMIKLMTPEGFASLMTTMWPEMIDAMPLGMGRMMRAMGRVPGALEAMKPLFPILFPRLLPLMMPKLMPAMLARVGAMIPMPDYMAEQMPVLMPKVVDRLMPHMIGDVVPLVTQPLIDYLHEQARLN
>NC_009767.1|WP_012120254.1|2231120_2232071_-|mevalonate-kinase
MQSHTSAPGKIILCGEHAVVYGRPAIALPLSKIRARASVAPGAAGIGIRFDAPNLGRRWLLAAAPGDPLSELTLATLKQLGITRIPDIQITITSDIPIASGMGSGAAIATAIVRALATAFGRNLSAAEISALVYASEQRYHGTPSGIDNTVIAYEQAIWFQRRSEPPHLIEPLPIAAPFTLVIGDTGVRSATRLPVGEVRRRWQEDPARYEALFDLVADVVHQARHALARGDVATLGPLLDRNQEALEQIGVSSPELERLITAARRAGAAGAKLSGGGWGGVMIALVDPETVVSVREALLAVGAARVLETTVSASA
>NC_009767.1|WP_041331879.1|2229738_2230854_-|tRNA-2-thiouridine(34)-synthase-MnmA
MAKIMIAMSGGVDSSLAAALLHEAGHDVTGVTLHLWEGDDDRLAESLCCSQEMTESARRVCAQLGIPYYVFNYQREFRRSVIEYFLREYASGFTPNPCLECNREIKFRALLARARALGFDYVATGHYARIRVDKTPADHSASPSPNGAQRAVYRLLRAVDEEKDQSYMLYMLGQDDLARLMFPIGEYTKAEVRALAAARGLASANRPESQDICFVPGGDYRNLLREERPDALRPGPILDLEGREVGRHQGLPLYTIGQRRGLGIATGQPMYVMALDVARNAVIVGPESALRRTTLRAERVTFVSGSWPEAPFDCLAQIRAHADAVPARVTPVEPERVEVRFEHPQRAITPGQAIVFYDGAVVLGGGRIARD
>NC_009767.1|WP_012120252.1|2229473_2229722_-|hypothetical-protein
MPPDLLLILLIVTVSAALAHLLWGRRWVQIPVFWLAATGGALIALALDARLPLRLITPAGVPVLETTLGAWVMLIVASRLRL
>NC_009767.1|WP_012120260.1|2244566_2245151_-|metal-binding-protein
MPDTPTHDIITVATGALLAPATYALLESNGRDYAATGATVLTGAHLISGLLFSPDLDIDSAIDNRWGIFFWIWRPYMWIIPHRHFWSHSLIIAPLLRLVYFSVVTMLIVIWGTWLLGYAGLGSSDLHAQAPAWIFDLMRRNPDMVRLFLFGFISGSAAHTIADWLVTGGRRYLHLAGIRLRSDYRNHDRARRHR
>NC_009767.1|WP_012120261.1|2245384_2245777_-|glyoxalase/bleomycin-resistance/dioxygenase-family-protein
MRPASFEQFVTFIYVRDLNASAAFYGDLLGLPLALDQGTCRIYCVASDAYLGVCQRNDTTAPPMPGSLILTLVTHDVDEWHRYLADRGVTVAQPPQYNPHFNIYHCFLRDPDGHLVEIQRFLDPAWPRAR
>NC_009767.1|WP_041330481.1|2247204_2248611_+|transcriptional-regulator
MDIHEQAITDLLAQAEGERVACVRANVRPIDLAQTMAAMANASGGTILIGVRGRQVEGVADVDAARAMAFDAALACLPPLVLPLPVVVTHNGATLLIVTVPSGLPHVYSVGGTYLRREGSANVPLAPDALRHLLIERGETSWDRMAPPDATLADLDAEKIAAYARRVGPIAEADPLAFLLRRGCLMQRSGTATGKTEFVPTNAGLLLFGVEIERWFPQAEVTLVRYQGREMSDAFLREDIRDTLPETARRAERWLIEHMRRGSRMVGLEREDWTQFPLGAVREALINALAHRDYTIRGDSIRVLLFSDRLECYSPGRLPGHVTLQNLVEERFSRNATLVQALADLGLIERLGYGIDRMLRQMADAGLPPPEFRETTAGFLVTLYGRTGDDRADAGGADVAAWRRMGLNERQIAALLFLAEHQRITNRDMQELAPDVSAETLRRDLVDLVERGLLLRVGDKRGAYYILK
>NC_009767.1|WP_012120263.1|2248595_2249225_-|peptidase-S16
MTHTSHNLTAELPLLALRGIVVFPPSVVPVAVSRPAAIRLVDDAVISGGLVAVSAQRGDDPDQCYAIGALARLHRLVRLHDGTLRIALQALERIAIEQVTQREPYLRALVHVLPDHINASDIATRMQEARARARELLDALPPNEEVRTQLESADDPRHLAALLASMLLVRANLAERQALLEIADVSERLVRISALLTHELDILRRHFRI
>NC_009767.1|WP_157042808.1|2249294_2249999_+|GDSL-family-lipase
MKHARTVHSWGGLCFLLASHPARNGRRRIVVEWYEPEVQELEQLNKSAPPPAGAVLFYGSSSLRLWTTLGEDMAPWTVVNRAFGGSTLAACVHFFDRLVIPCAPGSIVLYAGDNDLGDGRAPDDVVRSLRAMLARIDAALGSIPVAYMSIKPSPARWSLRDRIQRVNEAARALMEHRPSGYYIDVYTSMLGPDGRPRAELFDADGLHLSARGYQVWTHILRPYVAVLSGVQREP
>NC_009767.1|WP_012120265.1|2250210_2250939_+|esterase-family-protein
MQREYYLWWSPRLQRDMEMLVIGHAGARVLVFPTRAGRFYDYENWGLVETLRPSIEQGFLQLYCVDSVDRESLYAFHRPPQERIARHVQYESYILDEVLSLSRQLNPNPFVIAHGCSLGAYHAVNIAFRHPHLFHKVVALSGRYDLTVATGSFRALFDGYYDDTIYFHTPCHFIPRLTDPSILAHLRRMEITLVIGEEDPFIWTNHALSAALWEKDIPHALHIWPGEAHRIEHWREMIRHYL
>NC_009767.1|WP_012120266.1|2251572_2252871_+|hypothetical-protein
MQPALSQNPQVESATSLLPLRPRSIEATGLTLSFIADQMLRALYLIGEMTGLQLVELLHLPWENVLDQAMAYLRREQMAEVKGSSGVGEKAYRYQATAKGITRAKEIGERTQYLGPAPVNLSDYRNVMHRQTTQGLVVTEAAIREAFSHLVLSDSILLQLGPAINSGRSIFLFGHAGNGKTSIAEATARLLSDSIAIPHAIIVDGQIIRIFDPIHHERRPLAEGQEYAYDQRWVLSRRPVVIAGGELNMGSLDLEYDEYSKYYEAPLQLKANGGLFLIDDFGRQQMRPRDLLNRWIVPLEKRVDYLTLHTGKKIEVPFDQLIIFSTNIEPKQLVDEAFLRRIRYKIEIGNPTPAEYREIMRRVCKAKNVPYSDDGLRYLLEVEYPRRKLELRAVHPRDLIDQVIDYARFLGVPPTMSRELLAAACKSYFVEM
>NC_009767.1|WP_012120267.1|2252886_2253480_+|leucyl/phenylalanyl-tRNA--protein-transferase
MLTPDMLIAAYCQGLFPMADEHGVIHWYDPHPRAILPLEAFHVPHRLARTVRKGVFTIRTDTAFTDVMRACAEPAPGRETTWISEEMIVAYSALHRMGFAHSVEAWRDGRLVGGLYGVAIRGLFAGESMFSRERDASKVALVHLVERLRRGGYVLLDSQFLGSPHLLQFGLIEIPRWEYRRRLAQALQIDASWDAPV
>NC_009767.1|WP_012120268.1|2253486_2254743_-|PDZ-domain-containing-protein
MRASLIFAALVTMLVLPMGCTLPSVDLPRPVATEQTTAPTAAVQAEATRAPITPSAPTTTPAPLPAQAPLPTLPPELTNPLEAEQAALTALYRQVNPAVVSIEVVADHPPVGGAPFTVPTSQGSGFLFDDQGHIVTNNHVVENGAKFQVRFSDGTVVMARLVGSDPGSDLAVLKVDALPPGAAPLPLADSRTVEVGQRAIAIGNPFGLRNTLTVGVVSGIGRSLSGPASNSGGRFRIPNIIQTDAAINPGNSGGPLLNIYGEVIGVNTAISSGSGAFEGVGYAVPSNAVSRVVPALIRDGRYDHPWMGIGMRDVDPLLADSLNLPARQGVLITEVVPDSPAARAGLRSGTQIVSVGGRELRIGGDIIIAINGQPVRDSDELVSYLELETSVGDTVMMTVQRGDRQEQITMTLGARPRE
>NC_009767.1|WP_012120269.1|2254754_2255690_-|TIGR01777-family-protein
MSAHKHIVITGATGLIGKALCRRLMARGDTVTVFTRRPDAARAVLPGATQYIAWDAATGGTWESVLETADAVVHLAGASIAGRRWTPAYKHEILESRTVSTHTLVEAMARASRRPSVFVCASGIDYYGPRGDEPVDENAPPGRNFLAQVCVAWEGEASRAADLGVRTVMMRTGIVLDRHEGALARLLLPFQLFVGGPILPGTQWWSWIHLDDEVGLIMRCIDDERASGPFNGVAPEPQRNRDFSATLGRVLGRPSWLPLPGFVLRLLLGEMAPALLIERQRAIPAKAQALGYPFAYPTLEPALRAALARLP

Crispr_ID: NC_009767_45

• CRISPR_ID: NC_009767_45
• CRISPR_location: 2268439-2268542
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_45

Consensus_repeat	Method
GCGCGCGCCTGCGCCAGTTGCGCCTC	CRISPRCasFinder

spacers of NC_009767_45

>45.1|2268465|52|NC_009767|CRISPRCasFinder
CGCCGCCTGAATCTGCTCCGGGCGGGCGCCGTTCCGCGCCATCTCCAGGCGC

CRISPR arrays and Neighbor proteins around NC_009767_45

CRISPR arrays

The CRISPR arrays of NC_009767_45

>merge|NC_009767|45|2268439-2268542|CRISPRCasFinder
GCGCGCGCCTGCGCCAGTTGCGCCTCCGCCGCCTGAATCTGCTCCGGGCGGGCGCCGTTCCGCGCCATCTCCAGGCGCGCGCGCGCCTGCGCCAGTTGCGCCTC

>NC_009767|45|38|2268439-2268542|CRISPRCasFinder
GCGCGCGCCTGCGCCAGTTGCGCCTC	CGCCGCCTGAATCTGCTCCGGGCGGGCGCCGTTCCGCGCCATCTCCAGGCGC
GCGCGCGCCTGCGCCAGTTGCGCCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120276.1|2261088_2261541_-|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl|CDD|223393
NC_009767.1|WP_012120277.1|2261686_2262757_-|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl|CDD|274250
NC_009767.1|WP_012120291.1|2277071_2277335_+|cation:proton-antiporter	unknown	unknown	gnl|CDD|237148
NC_009767.1|WP_012120285.1|2270783_2271413_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|379522
NC_009767.1|WP_012120278.1|2262765_2263869_-|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl|CDD|378455
NC_009767.1|WP_012120293.1|2278251_2279829_-|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl|CDD|341259
NC_009767.1|WP_041331884.1|2271899_2274272_+|putative-monovalent-cation/H+-antiporter-subunit-A	unknown	unknown	gnl|CDD|237156
NC_009767.1|WP_041330492.1|2275095_2276592_+|Na+/H+-antiporter-subunit-D	unknown	unknown	gnl|CDD|237163
NC_009767.1|WP_041331885.1|2277343_2277763_+|monovalent-cation/H(+)-antiporter-subunit-G	unknown	unknown	gnl|CDD|237169
NC_009767.1|WP_041330486.1|2260236_2260626_-|DUF309-domain-containing-protein	unknown	unknown	gnl|CDD|377120
NC_009767.1|WP_041330488.1|2260643_2260988_-|sulfurtransferase	unknown	unknown	gnl|CDD|238786
NC_009767.1|WP_012120288.1|2274704_2275052_+|Na+/H+-antiporter-subunit-C	unknown	unknown	gnl|CDD|183659
NC_009767.1|WP_012120281.1|2266315_2267251_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009767.1|WP_012120279.1|2264243_2265212_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009767.1|WP_012120280.1|2265344_2266319_-|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NC_009767.1|WP_157042596.1|2267247_2268021_-|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|131480
NC_009767.1|WP_012120287.1|2274283_2274700_+|Na+/H+-antiporter-subunit-B	unknown	unknown	gnl|CDD|237122
NC_009767.1|WP_012120284.1|2269671_2270784_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|378925
NC_009767.1|WP_012120273.1|2259413_2260244_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|379312
NC_009767.1|WP_012120290.1|2276601_2277072_+|Na+/H+-antiporter-subunit-E	unknown	unknown	gnl|CDD|237159

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120276.1|2261088_2261541_-|iron-sulfur-cluster-assembly-accessory-protein	gnl|CDD|223393	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones].	1.22396e-40
NC_009767.1|WP_012120277.1|2261686_2262757_-|GTP-3',8-cyclase-MoaA	gnl|CDD|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.33567e-158
NC_009767.1|WP_012120291.1|2277071_2277335_+|cation:proton-antiporter	gnl|CDD|237148	PRK12599, PRK12599, putative monovalent cation/H+ antiporter subunit F; Reviewed.	2.53466e-17
NC_009767.1|WP_012120285.1|2270783_2271413_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|379522	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region. This family comprises the C-terminal domain of transcriptional regulators of the TetR family. It includes the AefR transcriptional regulator from P. syringae. It is found in association with pfam00440.	8.28422e-17
NC_009767.1|WP_012120278.1|2262765_2263869_-|Mrp/NBP35-family-ATP-binding-protein	gnl|CDD|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	1.1509e-139
NC_009767.1|WP_012120293.1|2278251_2279829_-|long-chain-fatty-acid--CoA-ligase	gnl|CDD|341259	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD. This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.	0
NC_009767.1|WP_041331884.1|2271899_2274272_+|putative-monovalent-cation/H+-antiporter-subunit-A	gnl|CDD|237156	PRK12647, PRK12647, putative monovalent cation/H+ antiporter subunit A; Reviewed.	0
NC_009767.1|WP_041330492.1|2275095_2276592_+|Na+/H+-antiporter-subunit-D	gnl|CDD|237163	PRK12663, PRK12663, Na+/H+ antiporter subunit D.	0
NC_009767.1|WP_041331885.1|2277343_2277763_+|monovalent-cation/H(+)-antiporter-subunit-G	gnl|CDD|237169	PRK12674, PRK12674, putative monovalent cation/H+ antiporter subunit G; Reviewed.	4.44658e-31
NC_009767.1|WP_041330486.1|2260236_2260626_-|DUF309-domain-containing-protein	gnl|CDD|377120	pfam03745, DUF309, Domain of unknown function (DUF309). This domain is found in eubacterial and archaebacterial proteins of unknown function. The proteins contain a motif HXXXEXX(W/Y) where X can be any amino acid. This motif is likely to be functionally important and may be involved in metal binding.	1.21693e-20
NC_009767.1|WP_041330488.1|2260643_2260988_-|sulfurtransferase	gnl|CDD|238786	cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.	3.45656e-29
NC_009767.1|WP_012120288.1|2274704_2275052_+|Na+/H+-antiporter-subunit-C	gnl|CDD|183659	PRK12659, PRK12659, Na+/H+ antiporter subunit C.	2.45239e-65
NC_009767.1|WP_012120281.1|2266315_2267251_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	4.24846e-93
NC_009767.1|WP_012120279.1|2264243_2265212_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.21599e-102
NC_009767.1|WP_012120280.1|2265344_2266319_-|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	4.58723e-25
NC_009767.1|WP_157042596.1|2267247_2268021_-|alpha/beta-fold-hydrolase	gnl|CDD|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	2.95576e-27
NC_009767.1|WP_012120287.1|2274283_2274700_+|Na+/H+-antiporter-subunit-B	gnl|CDD|237122	PRK12509, PRK12509, Na+/H+ antiporter subunit B.	4.77407e-66
NC_009767.1|WP_012120284.1|2269671_2270784_-|ABC-transporter-permease	gnl|CDD|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	1.91654e-35
NC_009767.1|WP_012120273.1|2259413_2260244_-|methyltransferase-domain-containing-protein	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.28099e-18
NC_009767.1|WP_012120290.1|2276601_2277072_+|Na+/H+-antiporter-subunit-E	gnl|CDD|237159	PRK12651, PRK12651, Na+/H+ antiporter subunit E.	3.28348e-72

Protein sequences

>NC_009767.1|WP_157042596.1|2267247_2268021_-|alpha/beta-fold-hydrolase
MMIHPREYTLAGPEHAPAIVLIHGARMTRALWQPQIDALGASLRVIAPDLPGHGALAHVPFSLDAAVSQIATVIDTVADGRAIVCGLSLGGYVALAFGARHPQRTTALVLSGCTFAFHGLPGRLIGAPYVAVTRFATRTFSPLLARAEERTLRKTYPAALAEPIIARGFFYRFYADISAALLDFDPLPALRACDMPVLLLNGANDRFFRRDEHSYLRALRQGRLRLIENASHLANLDQPEAYTTALRDFVSEVVAVQ
>NC_009767.1|WP_012120281.1|2266315_2267251_-|ABC-transporter-ATP-binding-protein
MNDLPAIETIDLSRSFGPVHAVYRLNLMVAAGRIHGLLGPDGAGKTTTLRLLCGALRPDSGRAIVAGIDVARDPEGVRQRIGYMPQRFSLYGDLTVLENLRFYADAYSVPHAERATLLNRLLGFSRLEPFRNRRADELSGGMRQKLALACALIHHPQILLLDEPTTGVDPVSRREFWDLLHEAVHDRGMTVLLTTPYMDEAERCHEVSFMRAGDLLAHGTPRELQRLVPGAVLEIRAEPRHAAETVIRALPEVRDVHVFGDRLHVIAAPGFDDAMLHQTLTDAGVTLHAIRPVSPGMEDIFLYLQRERRSQ
>NC_009767.1|WP_012120280.1|2265344_2266319_-|universal-stress-protein
MTRHILLPLDGSTTAEAVIPYAVSLARATGASLLLLRIVTPGEISQSLFWKTTIPAELRREWTEEVLARTNMYLASVAERLHSMSLRVSFDVQPADDAAAAIIARAEHEPGVGLIAMTTHGYGGALRWAFGSVAAKVLHAAPTPLLVVRSNGGARPPVAEVAYRTICVPLDGSLLAEQALAEAQLIAARTGAALVLISVVAHTDDGAIEAREYLERIADQLRARQIDARARVAEGAPAEQIIRAAEAEEADLIVMATHGRTGLQHLWLGSIATKVVHDSALPVLLVRAQDEEALYQSPVTIRHGHPEQSEGSCATRSDSSLSLP
>NC_009767.1|WP_012120279.1|2264243_2265212_-|ABC-transporter-ATP-binding-protein
MTDYAVITDHLTRRFGSFVAVHEVSLHVSYGEVFGFLGPNGSGKTTTIRMLCGLLTPSSGRGRVLGLDIARDQEAIRRRIGYMSQKFSLYGDLTARENLTFYADVYGLPRAERATRIDALIDLAGLRGHDRVLTADLPGGWRQRLALACAIVHRPQVLFLDEPTSGVDPEARREFWDLIYDLAGEGVTVFVTTHFMDEAEHCNRIGLMYGGRLVALDAPMALKRTTFDGAVLEVEGTPQERARTTLLAQPGVRSVAPHGARLHVIVDDAALRLPHLAAALESAQVSDVHIEPIDPSLEDVFVAIVDRYLGKQPDSPDESATR
>NC_009767.1|WP_012120278.1|2262765_2263869_-|Mrp/NBP35-family-ATP-binding-protein
MGLFSRHNDRPSEQAVLQALATVQEPELGGDLVSRKMIKNLVIDGDTVRFAVELTTPACPLKDQIQRECEEALETIAGIPRNRVSIEFTAQVRPRGGIPEQVAIPGVNHVVAVSAGKGGVGKSTVAVNLAVALAREGAQVGLLDADVYGPSVPLMMGVRSQQPEAVSGPDGEPRMLPIEAHGIKMMSIGFLIDDRQPVIWRGPMVSQLLRQFLYQVLWAPLDYLIIDMPPGTGDIALTLAQSLQNAGLTGVVTVTTPQQVATADVLKSMEMFRKVNVPLLGIIENMAYFIAPDTGKRYDIFGSGGAARLAGQLGIPLLGQIPLGLSIREGGDHGQPAVLSNEPDAYADVFREVARKLAARISVMEYA
>NC_009767.1|WP_012120277.1|2261686_2262757_-|GTP-3',8-cyclase-MoaA
MQYDDVRRMTIPLYTAEQARQARPFYPTDTPAHDSYGRRIDYLRISLTDRCNMRCVYCMPEIGMQFMPRPELLTTDELLLVVRAAARAGFRKIRLTGGEPTLRPDIVEIVREIKRIPGITHLAMTTNALRLEKLAEPLKAAGLDRVNISIDTLDPEKFRNMTRGGSFEKVWAGIEAADRVGLHPLKLNSVVVRGMNDDEVPRLAALTLRYPWEMRFIEVMPLTGVADLAQSSVVTSAELIARLESVYGPLEDLGLAPADSARRYRIPGAPGKLGFISSVSEPFCATCNRMRLTSDGRLHLCLLRDHEVDLRAAIRSGATLDEIEQIIRYAVALKPWGHGLPDGVLPTLRGMSELGG
>NC_009767.1|WP_012120276.1|2261088_2261541_-|iron-sulfur-cluster-assembly-accessory-protein
MATIEQDVINQHQESEFPPVLEITEGASLRLQSMMKERNLEGYGLRVFVSGGGCSGLQYGMTFDNEERFGDTVWNAHGLRIMVDPISARYLTGATISYQQDNMLAGAFKIDNPNAVSSCGCGHSFRTKEQQGTDDDYDGYGNGGGCCSSH
>NC_009767.1|WP_041330488.1|2260643_2260988_-|sulfurtransferase
MHPFFRAPYLDLTTDQVKAKLDRGDPFRFIDVREPEEYAIARIEGAELLPLSRAAEWIGTLDPGQEYVFFCHHGQRSAYVAAYVASNLGFTRVANMTGGIEEWSLRIDPSVPRY
>NC_009767.1|WP_041330486.1|2260236_2260626_-|DUF309-domain-containing-protein
MDHYLEGIRLFNAGEYWHAHEQWEICWLASAQSEAMFYKGIIQAAAALEKWKRGQPRGMRLNYVKSRPKLAAFSPWMRGLHVAALITAMDQFVLNGGPPAPVPRITLDPPTAAALAAHIRSLEAASRHV
>NC_009767.1|WP_012120273.1|2259413_2260244_-|methyltransferase-domain-containing-protein
MYDALLPDLRCPTCAGALDLGDARRDAAGEIISGALRCACGAVYPIRDGIADFLGPPRPPTIAQLTNELPATAWAYERLWRPFALTLLSGESFPYQRELALVTEWIEATRGGLMVDVACSNGLYARALAQAIRHVPGHVVGIDHARPMLREARQRARAAGVRVSYLRASAQSLPVASSAASGVTIGGSLNEIGDLDACLREVRRILARDGRFVTMTLLKGQSAVGRTVQHIVSAGGIAFWSPEELLRRFRAAGLYPQRDEQYGIVLFTLACPSSPS
>NC_009767.1|WP_012120284.1|2269671_2270784_-|ABC-transporter-permease
MFSRLWPVMRKEFIHIRRDPRTLVVMFIAPLMQLILLGYAATTDVRDVPLAVFDQDRTSASRDLVEAFVASGQFAVAHYTGSDRELAALIDGGRARAGLIIPPGYAADVQGRRGAQVVFVLDGSDPSIAGSSLSAARLIGQAKSVSIQTERRGATAPLLEVRTRVWYNPDMASAVFMIPGLIGLVLQLQATLLTSSAIVRERERGTIEQLIITPIRSFELILGKILPYALVALLITLEVLILGTFWFGVPIKGDVGLLLAISCLFLLSTLSIGLLISTVANTQQEAFLLTFLTLLPSVFLSGFIYPVAAMPAALQFISGIIPLTYYLIVVRGIVIKGVDASTLLPQIGALALFGAILIVAATARFRKRLD
>NC_009767.1|WP_012120285.1|2270783_2271413_-|TetR/AcrR-family-transcriptional-regulator
MAGADDSNTRDRRRQIMDAALQVFSTKGFQKATNRDIAEAAGGISPGLIYHYFKDKQDLFLSMLRERATILALVDHPQQLMDLPPRQGLTLVGRSYLTMMSIPENVAVFRIILAEALHFPEVAAMIRQHFVDRVFGVLRAYLQRQIDNGRLRPHDTSISVRTFLGSIVVHVIAREVLRQPEALQLADDQAVAMAVDVFLHGLSLEGEDA
>NC_009767.1|WP_041331884.1|2271899_2274272_+|putative-monovalent-cation/H+-antiporter-subunit-A
MLTAVLSGFGGAIAAPWLHRVAPRSAGWIMALLPFALMIYFISLVPTVAGGETLRFSYAWVPSLGINLSFRIDGLSLLFALLITGIGTLVMIYAGGYLANDPMLGRMLTLLLIFMAAMLGIVTSDNLIGLFVFWELTTISSYLLIGYKHEYEKARKAALQSLLVTGIGGLALLAGFVLLGQVAGTLEISDLLTQGAAVRAHPLYGGILALVLFGAFTKSAQFPFHFWLPGAMEAPTPVSSYLHSATMVKAGVFLLARLNPVLGGTEAWQWLLTGFGSATMIVGALLAVQQTDLKRILAYTTVSALGTLVALIGVGTDDALKAAMVFTLSHALYKGALFQVAGSVDHETGTRDITNLGGLRAVMPITAAAGMLAAVSMAGLPPLFGFIAKEVQYKANLEEPILITVALLTNMLTVVAAGLVSLRVFFGPPTQTPKHAHEAPLSMRMGPVALALAGLGTGLFSVQIGNALIGPATGSVIGKTKEIELLLWAGIEGAAGQALVLSVVTLVVGAGLYRARGIFARFAAATAPLASWGAEGWYQRAVDGMLALAAWQTRLLQNGYLRFYIGLIIATVLALTTFTLVVGRVVITIPADWADVRVYELMVALIIIAATTFVIRATSRMAAVVGLGFVGYGTALVFLLFSGPDLAITQFAVETLVAILFVLVVYRLPRFSNLSTAGARVRSAGLAIAGGALMTVLTLMALASPTESRVSGFLAENSVPQAFGRNVVNVILVDFRGFDTMGEITVLGAAAIGIYALLRLVPASEHDEQKGADAQTGNGVPRERTETIDV
>NC_009767.1|WP_012120287.1|2274283_2274700_+|Na+/H+-antiporter-subunit-B
MHSLILATATRLLLPLMLIFSIFLLIRGHNEPGGGFVGGLVAGAGFTLYAAVYGVAQAQNTLRIDPKRLIGAGLLVAALSALFSLFLGLPFMTGLWYKEALPVIGKVGTPLLFDVGVYLVVVGITVTIMFTLFEVEGE
>NC_009767.1|WP_012120288.1|2274704_2275052_+|Na+/H+-antiporter-subunit-C
MEFIWAIVIGVLYAAGLYMIMRRSVVKIVLGLALLGYAANLLIFIVSHVTRGNPPLVPVGAEAPIAPYADPLPQALILTAIVIGFGVQAFTIVLFRRAYRSCGADDIDELRTTEQ
>NC_009767.1|WP_041330492.1|2275095_2276592_+|Na+/H+-antiporter-subunit-D
MDVLLVLPVLIPFITGIVMLVFWGRRDIHRALNVVGAALLLVAGIALLDGVSRNGIQATQLGNWPAPFGISFVADLLSAIMVVITGLTALAVAVYSLGSMDEARERFGYYPLLHIMFMGICGAFLTGDIFNLYVWFEVLLMSSFVLMALGGERAQLEGSIKYVTLNLLSSALFLSAVGILYGAVGTLNMADLSQQLSLLNQPGLVTTLAMLFLTAFGIKAAIFPLFAWLPASYHTPPIAVSAIFAGLLTKVGVYALIRVFSLLFVQNIALTHGLILALAGLTMVTGVLGAVAQNEFRRVLSFHIISQIGYMIMGLGLFTSLALAGAVFYIMHHIIVKMNLFLVSGVVHRLRGSYELKDLGDVYKVYPWLAILFLIPAFSLAGFPPLSGFWAKLMLVQAGLQVEQYVIVAVSLVVSLLTVFSMTKIWAEAFWKKAPAPTQSNTQSLAFMVVPVVGLALVTVVIGLSVQPFYDLAQRAADQLLNPAEYIAAVQSASLALR
>NC_009767.1|WP_012120290.1|2276601_2277072_+|Na+/H+-antiporter-subunit-E
MFLLNILLAIAWSALTGQFTPLDLAFGFVLGYGILWILRRQLRGERYFVKAPQMVRFVVYVLWEIILANLNVARVVLLTPKERIKPGIVAIPLDIRSDAEITMLANLITLTPGTLSLDVADDRSCLYVHAIDVGDPEQFRRGIKEGFERLVYEVFN
>NC_009767.1|WP_012120291.1|2277071_2277335_+|cation:proton-antiporter
MVQIIALWVVLPLLSIAVALPVIRLVRGPSLPDRVVALDVMGTIAIAIFAAYALTNSKPAFLDAALVVGLIGFIGTIAFAYYTERRI
>NC_009767.1|WP_041331885.1|2277343_2277763_+|monovalent-cation/H(+)-antiporter-subunit-G
MQEIVSAVLLVIGTLLLLLAGIGIVRMPDIFLRMSAASKASSLGAGCVLLAVAVSAADIAITVRAVAGVLFLFLTAPVASHMIGRAAYMIGVPLWKGTLVDELKGHYDTRRHTLRGVDDASPRPQRGTGPLGDVRDAGR
>NC_009767.1|WP_012120293.1|2278251_2279829_-|long-chain-fatty-acid--CoA-ligase
MDTSLYALLERQAAARNDQVYLYWRDEEISYAEFTRKVRQAAHGLRALGVEHSDKVALLLGNCPEFLTIFFACAALGAVAVPINPRLKAEEVGYILQNSDSVVLVVADTLLPIIAPALDGCPQLRHIVIVGAVPETSITRTLHPFTSLSAAGDHPVSAAVGPEDIASIIYTSGTTGRPKGVLLSHGNYLFDVWSYATACQISEADRLLCMLPLFHVNAQVASVLSALHQGGALILLEGFSPREFLPALARYRATSFSAVPTIYAILNNLPDAGQYDLSSLRVCICGAAPMPVEVFERFEQIYRAFILEGYGLSEGTCVSTLNPLDGRPRKIGSIGVALPGQEVRIVDDQGQPVPPGTVGEIVIRGPNVMQGYYKNPEATAAAIRDGWLFTGDLGSRDAEGYFFIVGRKKEMIIRGGENIYPKEIEEVLYRHPAVAEAAVVGLPDPIWGEQVAAFIVAHPGISVSAETIIEHCRAHLADFKCPQVVEFVESFPKTATGKIQKNRLVERYAGLSAHRSPDAEAGPKS

Crispr_ID: NC_009767_46

• CRISPR_ID: NC_009767_46
• CRISPR_location: 2295419-2295542
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_46

Consensus_repeat	Method
ACGGATAGGCGCGGATGGGGCGCGCTGTCGTTCCCG	CRISPRCasFinder

spacers of NC_009767_46

>46.1|2295455|52|NC_009767|CRISPRCasFinder
CTTCCGCTCCGGCGCACGGTGGGGGCGGGCACACGGATTGGCACGGATCGCA

CRISPR arrays and Neighbor proteins around NC_009767_46

CRISPR arrays

The CRISPR arrays of NC_009767_46

>merge|NC_009767|46|2295419-2295542|CRISPRCasFinder
ACGGATAGGCGCGGATGGGGCGCGCTGTCGTTCCCGCTTCCGCTCCGGCGCACGGTGGGGGCGGGCACACGGATTGGCACGGATCGCAACGGATAGGCGCGGATGGGGCGCGCCGTCGTTCCCG

>NC_009767|46|39|2295419-2295542|CRISPRCasFinder
ACGGATAGGCGCGGATGGGGCGCGCTGTCGTTCCCG	CTTCCGCTCCGGCGCACGGTGGGGGCGGGCACACGGATTGGCACGGATCGCA
ACGGATAGGCGCGGATGGGGCGCGCCGTCGTTCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120307.1|2296727_2296940_-|dodecin-domain-containing-protein	unknown	unknown	gnl|CDD|377810
NC_009767.1|WP_012120301.1|2289414_2291187_+|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl|CDD|341259
NC_009767.1|WP_012120309.1|2298940_2300215_+|tyrosine--tRNA-ligase	unknown	unknown	gnl|CDD|235645
NC_009767.1|WP_083760296.1|2284939_2285893_+|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|378964
NC_009767.1|WP_012120298.1|2286341_2287703_-|potassium-transporter	unknown	unknown	gnl|CDD|273349
NC_009767.1|WP_012120313.1|2308289_2309108_+|DUF1444-family-protein	unknown	unknown	gnl|CDD|237463
NC_009767.1|WP_012120305.1|2295553_2296165_-|cation-transporter	unknown	unknown	gnl|CDD|224151
NC_009767.1|WP_157042597.1|2286174_2286327_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120300.1|2288454_2288685_-|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366431
NC_009767.1|WP_012120306.1|2296161_2296416_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120303.1|2292506_2293673_+|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341487
NC_009767.1|WP_012120312.1|2305321_2308267_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl|CDD|223124
NC_009767.1|WP_012120308.1|2297036_2297528_-|YbaK/EbsC-family-protein	unknown	unknown	gnl|CDD|239824
NC_009767.1|WP_012120299.1|2287699_2288368_-|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl|CDD|223643
NC_009767.1|WP_011956813.1|2289089_2289260_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120310.1|2300237_2303753_-|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl|CDD|237999
NC_009767.1|WP_012120302.1|2291293_2292505_+|hypothetical-protein	unknown	unknown	gnl|CDD|379575
NC_009767.1|WP_012120311.1|2304554_2305316_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|212491
NC_009767.1|WP_012120314.1|2309107_2309830_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041331891.1|2293877_2295347_+|histidine-kinase	unknown	unknown	gnl|CDD|223715

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120301.1|2289414_2291187_+|long-chain-fatty-acid--CoA-ligase	gnl|CDD|341259	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD. This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.	0
NC_009767.1|WP_012120300.1|2288454_2288685_-|Lrp/AsnC-family-transcriptional-regulator	gnl|CDD|366431	pfam01037, AsnC_trans_reg, Lrp/AsnC ligand binding domain. The l-leucine-responsive regulatory protein (Lrp/AsnC) family is a family of similar bacterial transcription regulatory proteins. The family is named after two E. coli proteins involved in regulating amino acid metabolism. This entry corresponds to the usually C-terminal regulatory ligand binding domain. Structurally this domain has a dimeric alpha/beta barrel fold.	1.61465e-09
NC_009767.1|WP_083760296.1|2284939_2285893_+|AraC-family-transcriptional-regulator	gnl|CDD|378964	pfam12833, HTH_18, Helix-turn-helix domain.	4.7159e-23
NC_009767.1|WP_012120298.1|2286341_2287703_-|potassium-transporter	gnl|CDD|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	1.96966e-74
NC_009767.1|WP_012120313.1|2308289_2309108_+|DUF1444-family-protein	gnl|CDD|237463	PRK13668, PRK13668, hypothetical protein; Provisional.	7.32305e-18
NC_009767.1|WP_012120307.1|2296727_2296940_-|dodecin-domain-containing-protein	gnl|CDD|377810	pfam07311, Dodecin, Dodecin. Dodecin is a flavin-binding protein,found in several bacteria and few archaea and represents a stand-alone version of the SHS2 domain. It most closely resembles the SHS2 domains of FtsA and Rpb7p, and represents a single domain small-molecule binding form.	2.81491e-23
NC_009767.1|WP_012120309.1|2298940_2300215_+|tyrosine--tRNA-ligase	gnl|CDD|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NC_009767.1|WP_012120305.1|2295553_2296165_-|cation-transporter	gnl|CDD|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	2.03013e-34
NC_009767.1|WP_012120303.1|2292506_2293673_+|iron-containing-alcohol-dehydrogenase	gnl|CDD|341487	cd14865, Fe-ADH-like, iron-containing alcohol dehydrogenases (Fe-ADH)-like. This family contains iron-containing alcohol dehydrogenase (Fe-ADH) which catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is a member of the iron-activated alcohol dehydrogenase-like family. It is distinct from other alcohol dehydrogenases which contains different protein domains. Proteins of this family have not been characterized.	0
NC_009767.1|WP_012120308.1|2297036_2297528_-|YbaK/EbsC-family-protein	gnl|CDD|239824	cd04332, YbaK_like, YbaK-like. The YbaK family of deacylase domains includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, ProX, and PrdX. The primary function of INS is to hydrolyze mischarged cysteinyl-tRNA(Pro)'s, thus helping ensure the fidelity of translation. Organisms whose ProRS lacks the INS domain express an INS homolog in trans (e.g. YbaK, ProX, or PrdX).	1.06486e-31
NC_009767.1|WP_012120299.1|2287699_2288368_-|TrkA-family-potassium-uptake-protein	gnl|CDD|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	6.43102e-52
NC_009767.1|WP_012120312.1|2305321_2308267_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl|CDD|223124	COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism].	0
NC_009767.1|WP_012120310.1|2300237_2303753_-|cyclic-nucleotide-binding-domain-containing-protein	gnl|CDD|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	6.5574e-21
NC_009767.1|WP_012120302.1|2291293_2292505_+|hypothetical-protein	gnl|CDD|379575	pfam14353, CpXC, CpXC protein. This presumed domain is functionally uncharacterized. This domain is found in bacteria and archaea, and is typically between 122 and 134 amino acids in length. It contains four conserved cysteines forming two CpXC motifs.	1.36179e-19
NC_009767.1|WP_012120311.1|2304554_2305316_+|SDR-family-oxidoreductase	gnl|CDD|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.24217e-76
NC_009767.1|WP_041331891.1|2293877_2295347_+|histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.74777e-43

Protein sequences

>NC_009767.1|WP_041331891.1|2293877_2295347_+|histidine-kinase
MERSPTLVDTYLRARLLGMALVNVSLALLLIVLYIGLLTILLWIGIQDQMIAHMLASVGMAVAVIPVRQRLVRFSNWLLRLRWQNSEEILREFSAALSHTIEPDALRALLIADLPQRLRLYSATLWMLEPPEDQMFVAIGQEAHLPGATILAQGASIGKVRRCPDYLRVPVHADDEWARPFVAQGIGLLFPLRIGSRLVGIYGCGWSMSRRGYSRQTISLLVTLAPAIASALENTRAYTEIARLNNQLRRLDKLKDQFIEHVGHELRTPLTSLSLALQLLTHQPELMRDLSHVVRNSILQLEALVNRVLLLDHSFENATAHMHRHSSSIELLPLLEEVAESFMPAVCAKGLDLRVQAPEGLAAWGDVTLLRRALHEVIDNAIRYSDTGTVTITASVRDGLAVITVEDQGPGIPPDERDLLFNAFYRGRRTRALAEQPGVGLGLSLARRDIEALRGQIWLERTGSDGSVMCVALPAVELSYNEVGRSLSG
>NC_009767.1|WP_012120303.1|2292506_2293673_+|iron-containing-alcohol-dehydrogenase
MIDFFEYHMRTRLMYKIGLAREFANEVAQLGVQRALLVADPGVVQAGLLDRVRGGLEGSIDVVGAFTDVPSDSSVATVEQGAAVARDTGADVLIAVGGGSAIDTAKAMRILLTEGGTLYDYQGANLLTRPLFPMIAIPTTAGTGSEVTPVAVIRDEQAEQKLFFLSPYLGPELAILDPEMTRTLPPRLTAATGMDALSHAIETFVGVGANPITDSLALQAIDMISNYLRAATHNGDDLEARGNMLIAAAIAGIAFSTTGIGVNTGIIHAASHTVGAAYHVHHGTANSILLPHGMRFNAAVVPNRMVRIARAMGVNAGGRPEEDVIADGIAAVAKLAADCGLPARLRDVGVPEDALPALAEGTLMDGAIMSNPRPVEYEDALAILRAAY
>NC_009767.1|WP_012120302.1|2291293_2292505_+|hypothetical-protein
MSISYAELASLTCPVCRTSFEAEIWTIVDARERPDLAGMLLSGELNMVTCPQCGHQADAGGPLLVHDPDGRRVYFAAPADAPEHVWRERARELLYVLVGSLPEEARLPYLGDVQVEVESGGVRKALLRRGRRFAPPPSIAPKPSRNVHTSSPPVERLDIAAAPDAVVVAIEELIAADTATEAAAVVNRHPVLATPDADVVIEQLISAARAHGEHDIARALTEARVLLHDLRAGVAPGDRQDTRAAPALADVEGIRLADVAYQAFLRTESLPALREAVADYPVLLEPWADEDLAARVDAALDEGNEHLAQAIELRRDALTRLRVEMTGAEGLHQAIDALLRAGHEPDALAAVVGEYPALLTDAAHTALFELAAGARARGDHALAEYAVECRALLRRVREGLQEE
>NC_009767.1|WP_012120301.1|2289414_2291187_+|long-chain-fatty-acid--CoA-ligase
MNNSVDRPWFASYEPNVPRSVEIPNVTLNYFLAESTRKYPYNTATNFVLSYLARGLYTVGGKMTYQKLNEMVDRFANALYQLGVRKGDRVALMLPNSPHYVIAFFASMRIGAIVVNNNPTYTARELKHQLVDSGSETIVLLNLFYPRLQEIRAETPLKRVIVAHIYDTLGPLSRFLVHAKQSKQPDWVDVSHDSSVYLFQHLLERYGPNPPTVDVQPEDVALFQYTGGTTGLPKAAMLTHRNLVANTVQVASWLTKTDYGAEKMMCAIPFFHVYGMTVAMIYGLYLGGELTIVPNPRELDHVMDVMQRERSTLFPGVPAMYIRIVNHPRINEYDLKSIKACISGSAPLPIEVQEKFGQITGGRLVEGFGMTELSPVSHCNPVFGKRKKGSIGIPLPDVDAKIIDLETGEDIPFGSDKEGELVVKGPMVMKGYWNRPEETEATFTPDGWLRTGDICKVDEEGYFYIVDRKKDMMIASGYKVLPRDVEEVLFTHPKVLEAVVVGIPHPTRGDDTIKAFIVLKPGESATPDEIREFCKQHLAPYKVPREVEFRAELPKTMVGKVLRRVLIEEEKAKLAGAPAMETAGASSARG
>NC_009767.1|WP_011956813.1|2289089_2289260_+|hypothetical-protein
MRNVVGALAFLIGLGIGMIGGAALLAYAYQAAGLYPPDDATIKFIARERGWLRDDV
>NC_009767.1|WP_012120300.1|2288454_2288685_-|Lrp/AsnC-family-transcriptional-regulator
MLARAYVLIEAEAGQVSSVLATLRAIKGITLADPVTGPYDIIVTIEVPDQRDIGRLVMNELHGIPGIKRTVTCLAI
>NC_009767.1|WP_012120299.1|2287699_2288368_-|TrkA-family-potassium-uptake-protein
MPRLNGKPEFAVIGLGRFGSSLALTLAERGFSVLGIDRDRAIVQSLADRLTQTVALDSTDEHALRAVDIPSFDTVVIAIGSNFEANLLTTVAVKSLGVPHVICKATTDRQRTILLRVGADRVILPEHEAGCRLAQELAAPGMVDQIALGVEHSITELRVPSSFVGHTLRECDLRRRYGVTVLAVKRGEHLTVFPAPDFTFAHGDLLAVIGENQSVARIAELK
>NC_009767.1|WP_012120298.1|2286341_2287703_-|potassium-transporter
MRLSPRSSVRSSYRPRPMPAALRLVIGLAILVTVGTLTLMLPWMGAQRPLTWNEALFTAVSALSVTGLSIITPVSDLSLAGQIVLLLLIQIGGVGFMVMAVIVFQLLGRRITLTDRLALTDSMGLLVPGAIVQLVRRVLLTVLLIETIGAALLWIHWRDMLGPERALLYAIFHSVSAFCNAGFDLFSGLPQHPYGIPNDSTSLAILGTLIFLGGLGIPVLAELLTFWRIRFSLHTRITLTVVLTLVSIGAGGLFLTEQQPGHPLANESLERQIALALFQSISTRTAGFSAFQPLDELSPAGRLLTIVLMFIGCAPASMGGGITTGTFAVLMLAVGAYARGLASPQIGGRTLAPQTVRKAAAILTVSLLVVLTATWLILITHEASLDDALFEVVSAFATCGLSLQLTGELNLFGQLVICVMMFWGRLGALTLVVALAHQRPQLVTYPEEQVLIG
>NC_009767.1|WP_157042597.1|2286174_2286327_+|hypothetical-protein
MAQSSPDVHVTSLPIARSLPLQVAQVIAVLITAAVLIGLTLLLNTFVFNA
>NC_009767.1|WP_083760296.1|2284939_2285893_+|AraC-family-transcriptional-regulator
MRNGENVERHNDVELALWSYGAVEVAWLEQAMHLAPASPSAMRVAALFAQGGVVRIRGAAVERINGSDPLAGTKTYQGSTASDRDRRGIAAPCYDGLELEPGAGWLWSGRAPLTIMPHPPGGALLAVLPATTLMARLGNVDALTGRILSVVQGCGAVCVQLLSALVLQAPLLSAGQRLILGDGALDAIIVWLRGEQTTDDHLSTRRRELLNAIYSYIDHRLEDYQLCPRVIADRFGVSVRYLHMLFAATGITVTRWITIRRLEVIRSELLRCGGDHGSIRDIATRWGFHDLSRFSRVFRQHFGEPPSVYVRRRVGIR
>NC_009767.1|WP_012120305.1|2295553_2296165_-|cation-transporter
MTDETSSSRASTGASLRRAVGFVALANFAYFGVEFAIALAIGSVALFADSIDFLEDTALNVLILVGLGWSPIWRGRLGMILAAILLIPGLATLWKAWEKFLHPTPPDPAWLAVAGVGALVVNLTCALALARHRKHHGSLAKAAFLSARNDALANVAIVAAGLLTAVILSGWPDLIVGLGILAINADAARQVWIAARREVRAEN
>NC_009767.1|WP_012120306.1|2296161_2296416_-|hypothetical-protein
MSTAELDALIDRLLPRVLADRDLGDGRVFTRLHLQHLWALSCLYAGQCYDETLLIDRLTTRLPRHVILSQDINTVPAPPRSYYS
>NC_009767.1|WP_012120307.1|2296727_2296940_-|dodecin-domain-containing-protein
MSESVYKIIELVGTSAESWEKAAVNAIETASRHLKDLRVGEVAEMDIHLEDGKIMYRTKLKVSFKYHEDI
>NC_009767.1|WP_012120308.1|2297036_2297528_-|YbaK/EbsC-family-protein
MTCLERLSAYLRDNRVSYTIHHHPTAYTASDVAAYEHVPPHTFAKVVMVFIDGRLAMLVVPADTRADLARLAEIIGAREICLADEREFASVFPDCEPGAMPPFGNLYNLPVYLDRDLAECAMITLQAGTHQDAITMRSEDFIRLVHPFIASFERDTQILAGHF
>NC_009767.1|WP_012120309.1|2298940_2300215_+|tyrosine--tRNA-ligase
MTTILDELRWRGLLYESSDGLDDLLERERVTLYIGFDPSADSLHIGHLLPLLTLARFQRWGHTPIALAGGGTGLIGDPSGKTQERPLLSKEQVAANVEAIKRQLAQFLDFNAGDHSAMLLNNAEWLTRLSLMDFLRDVGKHLTVNYMLAKDSVRSRMMSETGISFTEFSYMLLQAYDFAYLFEHYGCKLQAGGSDQWGNITAGIELIRRTSGQKAYGLVYPLVTKADGTKFGKTESGAVWLDPKRTSPYRFYQFWYNVDDADVGKYLRYFTWLSAAEIEELEQITARQPERRTAQQRLAREVTRMVHGEAALARAEEASQALFGGSLASLSADDVADIFEDVPSITLPRQDLEGDGMSLIDALVRCGIATSKSDARRAIEGGGIYINNVQSADVGRRLTLHDSIDGQCIVLRKGRRHYHLIRLV
>NC_009767.1|WP_012120310.1|2300237_2303753_-|cyclic-nucleotide-binding-domain-containing-protein
MMAMTTLKTTITTDFGPPQTVSRPLPGGIWAAVRHGVAASPTPTVQVYALIRKRITHRSVSDPLWTILRDRTDPAKYRPHAIPDVAADPVSEGDQTLYIVRSPRGNYIRLTEAQHEVWRAMDGTRTVSELGLAAFRQHGLILPIGELVAGLKAEGLLFDQPTGIYRAINDAITRGTTGAWRRRLRCILTGATLALPGIDAFYDRVYRWGGRLLFTRVFALLAGMIALIGIITFGLAMSSGSETYEVIRLNDSVTLGLAALWAVTLLSFVVHESAHALAVKHFGRTLTRGGVMLYYGLPAAFVDTSDIWRSPRRARVMVSAVGPAADLLVGSLAAIAAYLLPDTPVGAIAYKLAFTSFVSSVFNLNPLLELDGYYILVDLLRMPDLRRSALAYVRGPLWEKLGAHLRMRSTHWMQRMGKRPPATTLNLDERTLPLSRKERIYAIYGAATTLYTFLAIIGAVWFWQQQILEPALELLRGIWWQRLIGMALILTVVLPAVIAILLAFWEAGQTMVGWLVRRGYGRQPGLLAAVGVLLALIASLAVIGTRDGPWGWVALALGPALWIVALNALLAIRTYYRGATIYPAVLALVVTTTLAGMAGIARALPLPPGIWVILDGLAFVGLLVAGFTVLLDADLRTTPLHELLGTAILLMIAFAIGGVALFSVQTVYPTTGALAWLAMAAPAYFGALALALLLQHLFGLADSRLIWSWALLWASTLVKTAGYIADLRGDGLALDVLGAGLWTTAWLVHGAILRHLTLREFHWEHIPSMNESDRLVRAFQLTYCGCYRLLHSVYGERRARALDDRMDILAATANWEITLDHEQARIGQQVTTLPIAVQGARFAEVLRYTVAEIEQIAGAAFARRCIQAAYDALPWPERETASRLCFPDTPWARELSSSFGDMRAARLRLLRQVDIFLHCDDDELEALVASVIEQTLAGGATVLRAGAAAPGIWIIEAGEVVARRGERIVAELHRGDAIGAAEVMGNTPCAYTYRTTMTSSLLFLPAEEFFHLTAGRVPHATAGLELTEVLRLLEQVPLFADLPRNTLRGLAAIAEQHTYPARTVIVRQGRPSGTFFIIRKGTAAVVRHDSSAANEGQSRARLIARLGPQEFFGELELLRNAPPVASVIALTSLTTLTLPHAAIQALVHNDGSVSRQLERIGTGRLKALESR
>NC_009767.1|WP_012120311.1|2304554_2305316_+|SDR-family-oxidoreductase
MSTLNEKTAFITGGGRGIGRAIALTFAGAGAAVAVAGRNREALDEVCAIIEQRGGRAVAVTCDVADAMQVYTAVSTARAALGPFDILVNNAGVTYSAKLTDTDDALWERVIQVNLNGAYYCCKAIVPDMIARGGGRIINIASMASLVGMPFSAAYSAAKHGLLGLTRSLALELQRYHITSNAICPAWVDTDMMAEAINALAAKTGRTPEEAREALLSRGGQQRAMSPEEVAIAALRLAGPDGAVTNGEAIVLH
>NC_009767.1|WP_012120312.1|2305321_2308267_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MPAYLVTVCSRHDPAEPDHLFLLDGDLDGVAVARMTTDLLHDPVVQEASWTLIDNLDDEPVAGVAGVFLVEIAYRPGVTDNEAESVRSGAARLGIGGLNMVKTLRRYRVAQPGDERDLYNDLIQTALRYPAGSGAVERRAWYAHLLHPPADHEPFVARVPITTASDDDLMRISQEGILSLDLDEMRAIQAYYRSEGREPTDGELETLAQTWSEHCSHKTFKGRIIYKNLVPPDADDTALPAEVYPSLHRLMRDDEIDSLIRTFLMAATRRVLEQRKSLDFAVISAFVDNAGIVAFDNDYEVSFKVETHNHPSALEPFGGANTGVGGVVRDVLGVSAQPIANTDVLCFGPLDLPSADLSPGVLHPRRVAAGVVAGVRDYGNKLGIPTVNGAVLYDRGYVANPLVYCGTVGLAPRDAHPRAVRPGDAIVVIGGRTGRDGIHGATFSSAELTHTTAEEVGSAVQIGDPITEKKMMDVILQARDRKLYSAITDCGAGGLSSAVGEMGAECGAEVDLARAPLKYAGLQPWEIWLSEAQERMVLAVPQSRLTDLLTLCAGEDVEATVIGRYTDTGRLVVRYNDMLVVDLAMSFLHNGRPQRVLEAHWYGVAPSKQRRTNDGHCVETEASNLLLALLAHPNIASKEPIVRTYDHEVGGRTVVKPLIGDGPGDAAVLQPLPSSMRGIAIGCGINPRYGRIDPYWMALACVDEALRNVVAVGADPARAALLDNFCWGDPRLPDRMAGLVRAAAGCYDAAVAYGAPFISGKDSLNNEYRDAEGRRTPIPPTLLISALALVPDIRRAVTSDLKEVDNSVYLVGITKAELGGAHLFDVLPQSSIAATVSRAQTRVPRVDLVQAPHLMAALHRAIDAGLVRACHDLSEGGLGVAAAEMALAGNLGLALDLRTVPRDPDVDDDLTLLFSESPSRFLVEVRPADTAAFETMLAGYAHARIGVVTAADVQITGLTGATVVHLPLSAITAAWQGATVV
>NC_009767.1|WP_012120313.1|2308289_2309108_+|DUF1444-family-protein
MRNGDTPLMEADQFAAYIERRLSLYDDVLEVRERRGSSLIVHARGHEVTVSLDRFYRAYARDPARLDAIVQTMVSMLTRDIPARDRGDFAVLREHLFPMLKPISLLVFVRDRRLPMLVYRPFLADLIITYVVDEPQSVAYINEQHLDQWGVSERDIHEAALRNLRRRTDERVPYAMIGEDEQRLFIFNSNDGYDATRLLLTDILADWAQRVRGQLVIGIPNRDFLIALGDENPDILRSVAAQIQIDAVQRDYGLTDRLFTLVGGQIREYEMA
>NC_009767.1|WP_012120314.1|2309107_2309830_+|hypothetical-protein
MESGVLLLTIGAFGVAGTLAWRDRQPQYLIALASGLVATLLSPLWQRLYGFSYDPSLSPFFSVLDRPLPTMIFLAGWTIMLPPLVIFFLYQRRWWRSGYFTGALTFVLFTLYHILIETIGVRAGWWRYVDGGALPFDISVHVLAGLMNGLVSLGGLAVLLITRHYAWPMLMAVVLPTPLLMSALVHGLLGAPLYTVLLLRAQSWAASIGMLGTLGLILWGAHIIASELGRRPFIGRATPL

Crispr_ID: NC_009767_47

• CRISPR_ID: NC_009767_47
• CRISPR_location: 2330464-2330576
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas4

Consensus repeat of NC_009767_47

Consensus_repeat	Method
GTGGAAGTGGCAGATACCACGCTCAAGCGGGATCGAACC	CRISPRCasFinder

spacers of NC_009767_47

>47.1|2330503|35|NC_009767|CRISPRCasFinder
GGTATGAACGCTTGAACCGGCGTCTCTGTGACAGG

CRISPR arrays and Neighbor proteins around NC_009767_47

CRISPR arrays

The CRISPR arrays of NC_009767_47

>merge|NC_009767|47|2330464-2330576|CRISPRCasFinder
GTGGAAGTGGCAGATACCACGCTCAAGCGGGATCGAACCGGTATGAACGCTTGAACCGGCGTCTCTGTGACAGGGTGGAAGTGGCAGATACCACGCTCAAGCGGGATCGAACC

>NC_009767|47|40|2330464-2330576|CRISPRCasFinder
GTGGAAGTGGCAGATACCACGCTCAAGCGGGATCGAACC	GGTATGAACGCTTGAACCGGCGTCTCTGTGACAGG
GTGGAAGTGGCAGATACCACGCTCAAGCGGGATCGAACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120341.1|2334191_2334704_-|SRPBCC-family-protein	unknown	unknown	gnl|CDD|176854
NC_009767.1|WP_157042599.1|2324725_2324980_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330504.1|2327123_2327939_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120336.1|2328878_2330114_+|PrsW-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|379143
NC_009767.1|WP_012120332.1|2324976_2325489_-|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl|CDD|187768
NC_009767.1|WP_012120338.1|2330960_2331845_+|carbon-nitrogen-hydrolase	unknown	unknown	gnl|CDD|143597
NC_009767.1|WP_012120329.1|2322754_2324392_+|hypothetical-protein	unknown	unknown	gnl|CDD|378464
NC_009767.1|WP_012120343.1|2335432_2336305_+|hypothetical-protein	unknown	unknown	gnl|CDD|133150
NC_009767.1|WP_012120346.1|2339040_2339838_+|hypothetical-protein	unknown	unknown	gnl|CDD|226218
NC_009767.1|WP_012120339.1|2331855_2332902_+|agmatine-deiminase-family-protein	unknown	unknown	gnl|CDD|377332
NC_009767.1|WP_012120342.1|2335166_2335352_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_083760297.1|2325759_2327001_-|site-2-protease-family-protein	unknown	unknown	gnl|CDD|308008
NC_009767.1|WP_012120330.1|2324393_2324729_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330510.1|2332918_2333737_-|DUF92-domain-containing-protein	unknown	unknown	gnl|CDD|376674
NC_009767.1|WP_012120347.1|2339844_2340258_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120333.1|2325492_2325741_-|hypothetical-protein	unknown	unknown	gnl|CDD|187768
NC_009767.1|WP_012120344.1|2336605_2338195_-|flippase	unknown	unknown	gnl|CDD|240533
NC_009767.1|WP_012120345.1|2338246_2339041_+|hypothetical-protein	unknown	unknown	gnl|CDD|226953
NC_009767.1|WP_012120335.1|2328254_2328869_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293792
NC_009767.1|WP_012120328.1|2321803_2322538_-|metallophosphoesterase-family-protein	unknown	unknown	gnl|CDD|378975

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012120332.1|2324976_2325489_-|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	3.4e-23	77.4	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120341.1|2334191_2334704_-|SRPBCC-family-protein	gnl|CDD|176854	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket; they bind diverse ligands. Included in this superfamily are the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, and the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), as well as the SRPBCC domains of phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of this superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	6.73236e-09
NC_009767.1|WP_012120346.1|2339040_2339838_+|hypothetical-protein	gnl|CDD|226218	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.78848e-46
NC_009767.1|WP_041330510.1|2332918_2333737_-|DUF92-domain-containing-protein	gnl|CDD|376674	pfam01940, DUF92, Integral membrane protein DUF92. Members of this family have several predicted transmembrane helices. The function of these prokaryotic proteins is unknown.	1.29509e-73
NC_009767.1|WP_012120336.1|2328878_2330114_+|PrsW-family-intramembrane-metalloprotease	gnl|CDD|379143	pfam13367, PrsW-protease, Protease prsW family. This is a family of putative peptidases, possibly belonging to the MEROPS M79 family. PrsW, appears to be a member of a widespread family of membrane proteins that includes at least one previously known protease. PrsW appears to be responsible for Site-1 cleavage of the RsiW anti-sigma factor, the cognate anti-sigma factor, and it senses antimicrobial peptides that damage the cell membrane and other agents that cause cell envelope stress, The three acidic residues, E75, E76 and E95 in Aflv_1074, appear to be crucial since their mutation to alanine renders the protein inactive. Based on predictions of the bioinformatics programme TMHMM it is likely that these residues are located on the extracytoplasmic face of PrsW placing them in a position to act as a sensor for cell envelope stress.	2.1799e-23
NC_009767.1|WP_012120332.1|2324976_2325489_-|CRISPR-associated-protein-Cas4	gnl|CDD|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	7.67629e-21
NC_009767.1|WP_012120338.1|2330960_2331845_+|carbon-nitrogen-hydrolase	gnl|CDD|143597	cd07573, CPA, N-carbamoylputrescine amidohydrolase (CPA) (class 11 nitrilases). CPA (EC 3.5.1.53, also known as N-carbamoylputrescine amidase and carbamoylputrescine hydrolase) converts N-carbamoylputrescine to putrescine, a step in polyamine biosynthesis in plants and bacteria. This subgroup includes Arabidopsis thaliana CPA, also known as nitrilase-like 1 (NLP1), and Pseudomonas aeruginosa AguB. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 11. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer; P. aeruginosa AugB is a homohexamer, Arabidopsis thaliana NLP1 is a homooctomer.	0
NC_009767.1|WP_012120329.1|2322754_2324392_+|hypothetical-protein	gnl|CDD|378464	pfam10646, Germane, Sporulation and spore germination. The GerMN domain is a region of approximately 100 residues that is found, duplicated, in the Bacillus GerM protein and is implicated in both sporulation and spore germination. The domain is found in a number of different bacterial species both alone and in association with other domains such as Amidase_3 pfam01520, Gmad1 and Gmad2. It is predicted to have a novel alpha-beta fold.	3.63277e-19
NC_009767.1|WP_012120343.1|2335432_2336305_+|hypothetical-protein	gnl|CDD|133150	cd05483, retropepsin_like_bacteria, Bacterial aspartate proteases, retropepsin-like protease family. This family of bacteria aspartate proteases is a subfamily of retropepsin-like protease family, which includes enzymes from retrovirus and retrotransposons. While fungal and mammalian pepsin-like aspartate proteases are bilobal proteins with structurally related N- and C-termini, this family of bacteria aspartate proteases is half as long as their fungal and mammalian counterparts. The monomers are structurally related to one lobe of the pepsin molecule and function as homodimers. The active site aspartate occurs within a motif (Asp-Thr/Ser-Gly), as it does in pepsin. In aspartate peptidases, Asp residues are ligands of an activated water molecule in all examples where catalytic residues have been identified. This group of aspartate proteases is classified by MEROPS as the peptidase family A2 (retropepsin family, clan AA), subfamily A2A.	2.24476e-05
NC_009767.1|WP_012120339.1|2331855_2332902_+|agmatine-deiminase-family-protein	gnl|CDD|377332	pfam04371, PAD_porph, Porphyromonas-type peptidyl-arginine deiminase. Peptidyl-arginine deiminase (PAD) enzymes catalyze the deimination of the guanidino group from carboxy-terminal arginine residues of various peptides to produce ammonia. PAD from Porphyromonas gingivalis (PPAD) appears to be evolutionarily unrelated to mammalian PAD (pfam03068), which is a metalloenzyme. PPAD is thought to belong to the same superfamily as aminotransferase and arginine deiminase, and to form an alpha/beta propeller structure. This family has previously been named PPADH (Porphyromonas peptidyl-arginine deiminase homologs). The predicted catalytic residues in PPAD are Asp130, Asp187, His236, Asp238 and Cys351. These are absolutely conserved with the exception of Asp187 which is absent in two family members. PPAD is also able to catalyze the deimination of free L-arginine, but has primarily peptidyl-arginine specificity. It may have a FMN cofactor.	0
NC_009767.1|WP_083760297.1|2325759_2327001_-|site-2-protease-family-protein	gnl|CDD|308008	pfam02163, Peptidase_M50, Peptidase family M50.	5.19086e-54
NC_009767.1|WP_012120333.1|2325492_2325741_-|hypothetical-protein	gnl|CDD|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	0.00178908
NC_009767.1|WP_012120344.1|2336605_2338195_-|flippase	gnl|CDD|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.11597e-53
NC_009767.1|WP_012120345.1|2338246_2339041_+|hypothetical-protein	gnl|CDD|226953	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.06433e-28
NC_009767.1|WP_012120335.1|2328254_2328869_+|MBL-fold-metallo-hydrolase	gnl|CDD|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	2.09845e-45
NC_009767.1|WP_012120328.1|2321803_2322538_-|metallophosphoesterase-family-protein	gnl|CDD|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	6.9844e-14

Protein sequences

>NC_009767.1|WP_012120336.1|2328878_2330114_+|PrsW-family-intramembrane-metalloprotease
MPASAKLVARAMVGSPIARPFGGCLFVAGMLALLGFAFLGHLALWILEPVTRVGIFLTGVLIGTVASLPLLALLRWLDRRERESLWLAIGAVVWGAVISTGLSAIFNALGFGFISVSLEIVGGVDSELIGQLLAATLVAPPVEEAFKGLAILVLFWFLRAEFDNVRDGIIYGALVGIGFNIAEYALYVMQGYAESGVAPFAEQFAGRFVFLGFNGHMLWSAICGAGVGFARQSTGGGCTTLGAPVAGYLAATFGHALNNSVGVFLLGVILVVMGYDVEGGLMSVSPFALWTAAAIMNVLVQGVFYVALLVLLALTSRWEREVIRTYLADEVGVSVTPEEYSAIVNDRMFGALGSRGTPWQLALAQNELAFRKWHVAREGGNPATDPLVAAWRQDIATLREEWLRSRQVSQA
>NC_009767.1|WP_012120335.1|2328254_2328869_+|MBL-fold-metallo-hydrolase
MELRSRAVGPWPMNSYALVCPTTRHSVLIDPGAESDELIAMLDDTTPVAILLTHTHPDHIGALEEVRNRLGVPVFAHPGPCVAGMAPVDRALAHGDVVTVGDSVIRAWHTPGHTADMVCYLVEGAPIAVVGDTLFDGGPGRTWSVDDFHTTLVTLRTIVLTWSDDTICYPGHGPSFRLGDRRAAIERFLAHAPEGFCGDATWDV
>NC_009767.1|WP_041330504.1|2327123_2327939_+|hypothetical-protein
MAAKDGKSLFCYGLKPSLKTWKPLGLAAKDGKSLFCYGLKPSLKTWKPLGLAAKDGKSPFCYGLKPSLKTWKPLGLAAKDGKSPFCYGLKPSLKTWKPLGLAAKDGKSPFCYGLKPSLKTWKPLGLAAKDGKSPFCYGLKPSLKTWKPLGLAAKDGKSPFCYGLKPSLKTWKPLGLAAKDGKSPFCYGLKPSLKTWKPLGLAAKDGKSPFCYGLKPSLKTWKPLGLAAKDGKSPFCYGLKPSLKTWKPRRGLCDLSRGFSLQRPGMPVLFV
>NC_009767.1|WP_083760297.1|2325759_2327001_-|site-2-protease-family-protein
MPGPATFTIVDRHFCNTVHYPIRSTPVRWCYSCRALFKRRSTVFESLPDGLVTIAAFLLMLGLLVLVHELGHFLTAVWFGIKVEEFGLGYPPRAMVLFERNGVKYTLNWLPIGGFVRFGGEGEQIYGVGSLSAASPWKKIAVLFAGPLMNLLLAFLIFSGIFMARGVPEAFNGARIDVVYPATPAERAGLQSGDLLVSLNGRTLDTDLSVIRLIAAENRGRTIEAVVERDGARVVLMITPGPWQRDGVAFENGFGFAYTPNIQIVPATPLKALNAGFSYTFDILGRFIAGIGQMLGSLLGITEAPQGGVAGVVGIARGTGEVIQRDGWLGFWQWTALISLNLFLINLLPIPALDGSHILFSLIEIARGGKKIPPEREAMVHAIGFMMLMGLMVVITVSDVANWIGGNPVLGGG
>NC_009767.1|WP_012120333.1|2325492_2325741_-|hypothetical-protein
MPGPRLPIIRASEIGEYVYCARAWWLRRVAGLEPEERARREYGTTLHHRHARSVALSRLFAIIAALLGTLALALLIGGWMAG
>NC_009767.1|WP_012120332.1|2324976_2325489_-|CRISPR-associated-protein-Cas4
MAITVGLALLLLALVALIGALRLRASAGLPWAPVVYRDTDAQSPERPLIARRIGLVGKPDYLIQKRGRLIPVEVKPGRNATRPYESDLMQLAAYCLLLEETTGVAPPYGLLCYADRTFRLSYTAQVRQETLALIEEMRAALDNECDRSHDDPARCLGCGFFSMCDQALRR
>NC_009767.1|WP_157042599.1|2324725_2324980_-|hypothetical-protein
MMVITCTMVAEQIDERLSGALTNEALAAWAFDRFYDVELGLARFEEGAAARIADVLDALMFSDYEAFRLNEEELRRLAALLRMP
>NC_009767.1|WP_012120330.1|2324393_2324729_-|hypothetical-protein
MKIRTHPRIGAICVGDEVYSYRYHLFARVEAVFPAAVCVKIAAIGGVHPLELTLIPQLWRADDIENLSVCRYCGGRSDLSLERETGIPFRVCAHCRIVPPQEHRYVQWRWW
>NC_009767.1|WP_012120329.1|2322754_2324392_+|hypothetical-protein
MSEPTPTGPGYCPYLGLKQNRAIRFSSPTPEHRCYVSGEPVDIPVDQSAFCLSRNHVQCPLYMGLTLPSIPATVSSSGATTTAPGGLRGWLRTLSPRDRAIYALMLGMLALIVLVYAIAGWQALTGTAPVTGAPSPITVAPPETATATPAPLPSPSATATPPPPTPTALPTSTPSPQPNPSPTQEPVIIVPTALPTQPTGTAGVAPSPTDNATATPSPTVAAPATPSPTGQPAPASPTLTATAAPPPTTAPTAPPQPPTAVPPAMPRTPAPPAAPTVQQQRLWLYFGDATGTLFVPVQRLVPVEDRKVATAAINALIEGPRNGLERLIDPQARLLSIAINNGLATVNFDRPPHLNGDPRGLHSIVLTLTHFETISRVQFQVNGRNIGIDGSGPIGRPVVNPLNPNNLPVDYAATEFLPTYYLANDGYHTIRIIRMVPKTRQVAEGTVRALIEGPGIYEYAVQRTIPPGTELRAISINQGVARVDFSARFAEASDRNAAVRTLVESLTTLPRVSGVQILVEGRSLAEWWGEPYGRVYPKPLINPEG
>NC_009767.1|WP_012120328.1|2321803_2322538_-|metallophosphoesterase-family-protein
MRILILSDIHSNIVALETVLSAAKPYDTVWNLGDTIGYGPRPNECVATIRTEASMMLAGNHDLACLGLLDLSDFNPDARAANVWNGDQLTDDHRMLLEELEPIQPINERFLAAHGSPREPVWEYLLTRYQALDNFRRFAQQVCLIGHSHVPLVFRLTPDGRCEGPSSPDDGARLTLEDGFRYIINPGSIGQPRNQDPRAAFAIFDTAIDTITFHRVAYDIALTQRQMRDAQLPEALIARLEYGI
>NC_009767.1|WP_012120338.1|2330960_2331845_+|carbon-nitrogen-hydrolase
MSRLVAVGLVQMRMTDDPQRNFGAAVEGIREAAARGAQIVCLPELFRSLYFCQSEDHRHFALAEPIPGPSTEALSALARDLGVVIIASLFEKRAEGLYHNTAAVIDADGRYLGKYRKMHIPDDPLYYEKFYFTPGDLGFKVFATRYARAGVLICWDQWYPEAARLTALRGADILFYPTAIGWHPQEKDAYGAAQHASWEIIQRSHGIANGCYVVSVNRTGHEGDSDGGIEFWGQSFVSDPSGTILAKAAVDRPDVLVVSIDLARIDEQRTHWPFLRDRRIDAYGEMTRRYIDEE
>NC_009767.1|WP_012120339.1|2331855_2332902_+|agmatine-deiminase-family-protein
MTTSQPTPAQLGYRMPAEWAPHQATWLSWPHNEESWPGKLHIVLPIYARMVAALARSETVHINVNDEAMEEEACRLLHSVGAEGDIHFHHFPTNDAWCRDHGAIFVVRDGDDPLAAIRWEYNAWGGKYPPFDLDRQIPRRMAEALGAPCFDGGMVLEGGSIDVNGEGLLLTTEACLLNPNRNPHLTREQIEQRLCDYLGVSTVLWLGDGIVGDDTDGHVDDLTRFVAPDTVVTAVESDPSDENYDALQENLRRLRRMTDHRGGALRIVALPMPPAIVYEGRRLPASYANFYIANRVVLLPTFNHPNDDRAAAILAELFPTREIVGIDCTDMVWGLGAWHCLTQQVPAV
>NC_009767.1|WP_041330510.1|2332918_2333737_-|DUF92-domain-containing-protein
MIDVPRIAAGLVLSTVIGAVAYRRQSLDLSGWLGAVVTGTLTFGFGGWTWGCVLIVFFVTSSALSHFRQAQKQRIAGEKFEKGGRRDLWQALANGGAGATLALVYGLAGEPTVLLAAYVGIMATVTADTWATEIGVLSPHSPRLITSGRVVPPGTSGGVTIYGFGASAAGAFLIGAATLGLMAVEREIWLPLLLPVALAGGVGGSLLDSLLGATVQAMYLSPTGETEKRASREGRVFPLVRGWRWMNNDMVNFLSSLAGGAVAAGMYAWIAG
>NC_009767.1|WP_012120341.1|2334191_2334704_-|SRPBCC-family-protein
MNTVRSGNLTWDKTKTNNGLVVTVERNRRIAASADRVFATLSDPQTLAGLLPRVKKVEVLHRGASSARVATHMAMGPFATIRSEGDVRWKQDQEVVFTSRHPVTVESHWSFVPEGKGTDLRVKLTIDLAPMLGPLAAMVPADQVASMIGPDLDQALSALARRIEGSGVRG
>NC_009767.1|WP_012120342.1|2335166_2335352_+|hypothetical-protein
MAEKKSKTDVTARDKSGRVTNHNCANCGERIMNDREMVVVMDGRRRNKTYHHRACFQKAVA
>NC_009767.1|WP_012120343.1|2335432_2336305_+|hypothetical-protein
MVEDRTQIEFPAQGATTVALCEPFGVLCCRASGPGGHPLRVLIDTGTDPSAVDARLVHRLALPTGGSGIGQGAANTVAFTEAVFPWLRLGNADAPGNQALTVRDLYAPALDLSGLPFAVDVVIGYSVLRHLTLRIDFRTRSLTLAHPDLGFPSIGSSGVVMPLSFFEHFPAIGNLVIDGVVIPQATIDTGSNAAITVGPDLAVRLGLRRNGADVRIVRGEGFGGGGDVLRRRFDQVRLGPFTLTNIDIDAPLTWGGDLGRASRANIGMPLLARFATVVIDYGREQAGFEP
>NC_009767.1|WP_012120344.1|2336605_2338195_-|flippase
MLNETASIFLLAVAALIPLLLGAAWAWQRFYREDQSDTARTIAKNSALPIAANLINKAIDFGFAVIALRFLGPEGNGAYAFVALIAGLYFLTITNWGLNDLTVREAAPDLSRAPRLFSITLLLRLGITTLLLPIAALLVVGYSLLERPLSSAEITALALLMLHLYPAALAAACSASFQAYQRMEVTALVVLLTNVVKTLAGVGALLIAPDAPARVVALAAVALAATVLNAVIFYILQRRMLFRAPLVWDWPTGRDLLREGFPLLLNSLLLAVFFRFDVVLLRAQAGVAALGLYDAAYKVINMTQIVSPYFVAALFPLLARYAVTDRAALERMYHRALGLLQLVAWPVAVGGTLLAPVIIAVLGGRAFLPGAALALAILIWYLPLSYANGVTQYVLIALRRQRAITVAFVIGAVFNLGMNLLLIPAYGYLAAASVTVATEVALLLPFLRTLRREGAMPPLLRLMWRPALASLIMGAAMWPALVLSPWLAIAVGASVYPAALWALGAFGPEERALMRRMLSKSGVSSGGAH
>NC_009767.1|WP_012120345.1|2338246_2339041_+|hypothetical-protein
MRLYYEIAIRSFRRATIYRSAYVAGILTNAFFGVLFSSMYRALYEGRERIAGLTLHDAISYVWLSQALIAIGAGWISWHMELERGIRTGDIVADLARPWNFYAFWLSRVLGERLFNLLVRGSLTYLIGILYFDALIPSIEALAAFAIAVLLSILISAALNFLVNITAFWLIDITGLVLVTNLTMGFFSGFLLPLAFFPPALAVIAQALPFQAITSIPVRTLLGQVRGADLALALTTQVCWAMALTGAALLALRAAMRKIVLQGG
>NC_009767.1|WP_012120346.1|2339040_2339838_+|hypothetical-protein
MLAISLRLIGARIRSQMQYKTSFWLDLVGTAVSTGMEFVVLFLLLQRFTLIGGWRLHEIGLLYGLTSVSFGLAEMIGRGFDSPFERLIQHGDFDRVLTRPLSSFVQVLASEVQLRRLGRAVQGAGVLIFSLAQVEAFWTPVLLLLLLLSILSGALIYVGLIVIGATICFWTIKTPEVINVFTFGGQQLTSLPLSIYDRWIRAVFLSIAPVAFASYPAALVILGRSDPHGLPAWIAWCAPVVASVFFAAVLGFWQIGVRRYQSTGT
>NC_009767.1|WP_012120347.1|2339844_2340258_-|hypothetical-protein
MISRFLALTLLAFLVAACGSAPLAEPPVYPDATAASQGESPLADAMVSGLTAEIVGEQQASAIRLFRVPGSIAWEQVKQFYAGRLESSGWRADGRLLVEGDTISYAAWRNGDQLLALAHTEDASTGATYLAVAVLRR

Crispr_ID: NC_009767_48

• CRISPR_ID: NC_009767_48
• CRISPR_location: 2542547-2542655
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas6,csx1,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas2

Consensus repeat of NC_009767_48

Consensus_repeat	Method
CATACCACACCCGCGCAGGAGAAGCGTCATGG	CRISPRCasFinder

spacers of NC_009767_48

>48.1|2542579|45|NC_009767|CRISPRCasFinder
CAACATCGCGTGCATGGCGGGTTGACCTGGCAGACCTCCCACACA

CRISPR arrays and Neighbor proteins around NC_009767_48

CRISPR arrays

The CRISPR arrays of NC_009767_48

>merge|NC_009767|48|2542547-2542655|CRISPRCasFinder
CATACCACACCCGCGCAGGAGAAGCGTCATGGCAACATCGCGTGCATGGCGGGTTGACCTGGCAGACCTCCCACACACATACCACACCCGCGCAGGAGAAGCGTCATGG

>NC_009767|48|41|2542547-2542655|CRISPRCasFinder
CATACCACACCCGCGCAGGAGAAGCGTCATGG	CAACATCGCGTGCATGGCGGGTTGACCTGGCAGACCTCCCACACA
CATACCACACCCGCGCAGGAGAAGCGTCATGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120499.1|2552107_2552740_+|orotate-phosphoribosyltransferase	unknown	unknown	gnl|CDD|234771
NC_009767.1|WP_012120502.1|2554643_2555816_+|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341473
NC_009767.1|WP_012120500.1|2552773_2553898_+|glycosyltransferase	unknown	unknown	gnl|CDD|340828
NC_009767.1|WP_012120497.1|2543681_2543963_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NC_009767.1|WP_157042609.1|2540189_2540333_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120490.1|2534513_2534996_+|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl|CDD|367635
NC_009767.1|WP_049768818.1|2532276_2534517_+|hypothetical-protein	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811
NC_009767.1|WP_041331922.1|2535014_2535848_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274212
NC_009767.1|WP_157042611.1|2550397_2551408_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120495.1|2541532_2542396_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl|CDD|273848
NC_009767.1|WP_041330577.1|2554332_2554539_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120504.1|2557325_2558177_+|DUF2079-domain-containing-protein	unknown	unknown	gnl|CDD|370724
NC_009767.1|WP_157042610.1|2541093_2541246_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120493.1|2537002_2538433_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	COG1332_csm5gr7_CAS-III-A	gnl|CDD|187793
NC_009767.1|WP_012120494.1|2538726_2540193_+|hypothetical-protein	csx1	mkCas0109_csx1_CAS-III	gnl|CDD|187833
NC_009767.1|WP_157042813.1|2558278_2558686_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120492.1|2535860_2537003_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl|CDD|273866
NC_009767.1|WP_012120506.1|2559647_2561591_+|PhoX-family-phosphatase	unknown	unknown	gnl|CDD|225752
NC_009767.1|WP_041330579.1|2555951_2557322_+|DUF2079-domain-containing-protein	unknown	unknown	gnl|CDD|370724
NC_009767.1|WP_012120488.1|2529901_2531317_-|hypothetical-protein	unknown	unknown	gnl|CDD|290220

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012120495.1|2541532_2542396_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	2.2e-23	77.9	0.0
NC_009767.1|WP_012120493.1|2537002_2538433_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	COG1332_csm5gr7_CAS-III-A	1.3e-29	98.7	0.0
NC_009767.1|WP_012120497.1|2543681_2543963_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	6.1e-28	91.6	0.1
NC_009767.1|WP_012120494.1|2538726_2540193_+|hypothetical-protein	csx1	mkCas0109_csx1_CAS-III	1.1e-190	629.2	0.0
NC_009767.1|WP_012120490.1|2534513_2534996_+|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	3e-43	141.8	0.0
NC_009767.1|WP_049768818.1|2532276_2534517_+|hypothetical-protein	cas10	cd09680_cas10_CAS-III	3.3e-79	261.8	0.0
NC_009767.1|WP_041331922.1|2535014_2535848_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	2.4e-71	234.6	0.0
NC_009767.1|WP_012120492.1|2535860_2537003_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	8.1e-27	89.0	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120499.1|2552107_2552740_+|orotate-phosphoribosyltransferase	gnl|CDD|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	1.67488e-53
NC_009767.1|WP_012120490.1|2534513_2534996_+|type-III-A-CRISPR-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	5.27935e-32
NC_009767.1|WP_012120497.1|2543681_2543963_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.92512e-28
NC_009767.1|WP_012120500.1|2552773_2553898_+|glycosyltransferase	gnl|CDD|340828	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.	2.14682e-35
NC_009767.1|WP_049768818.1|2532276_2534517_+|hypothetical-protein	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	2.98133e-86
NC_009767.1|WP_041331922.1|2535014_2535848_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl|CDD|274212	TIGR02582, CRISPR_type_III-associated_RAMP_protein_Csm3, CRISPR type III-A/MTUBE-associated RAMP protein Csm3. Members of this CRISPR-associated (cas) gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm3, for CRISPR/cas Subtype Mtube, protein 3.	9.65936e-86
NC_009767.1|WP_012120506.1|2559647_2561591_+|PhoX-family-phosphatase	gnl|CDD|225752	COG3211, PhoX, Predicted phosphatase [General function prediction only].	0
NC_009767.1|WP_012120495.1|2541532_2542396_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	5.87393e-13
NC_009767.1|WP_012120502.1|2554643_2555816_+|iron-containing-alcohol-dehydrogenase	gnl|CDD|341473	cd08194, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like. This family contains iron-containing alcohol dehydrogenase (Fe-ADH) most of which have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. It is distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.	0
NC_009767.1|WP_012120504.1|2557325_2558177_+|DUF2079-domain-containing-protein	gnl|CDD|370724	pfam09852, DUF2079, Predicted membrane protein (DUF2079). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.99866e-16
NC_009767.1|WP_012120493.1|2537002_2538433_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.81072e-16
NC_009767.1|WP_012120494.1|2538726_2540193_+|hypothetical-protein	gnl|CDD|187833	cd09702, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TIGR02710 family.	2.97681e-06
NC_009767.1|WP_012120492.1|2535860_2537003_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl|CDD|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	8.27919e-26
NC_009767.1|WP_041330579.1|2555951_2557322_+|DUF2079-domain-containing-protein	gnl|CDD|370724	pfam09852, DUF2079, Predicted membrane protein (DUF2079). This domain, found in various hypothetical prokaryotic proteins, has no known function.	3.03239e-32
NC_009767.1|WP_012120488.1|2529901_2531317_-|hypothetical-protein	gnl|CDD|290220	pfam13485, Peptidase_MA_2, Peptidase MA superfamily.	5.49796e-07

Protein sequences

>NC_009767.1|WP_012120495.1|2541532_2542396_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MPVSLIFTIRPLAAAEKPASLGRAAHAAILRLIGDSDPALATRLHDDDGPKPLTVSNVIGLEARQHMARVYPDRRYRLRVTLLTPALEAIAAAWRPAALAPLDLDGLLWRIEQITDNPGDDPWAGRAAYEELATALLARHATSARWTFEFATPVTFRQRGLNQPLPLPALTFGSLLERWNAFAPIALPDETRRFAEECIAVSRFELRSRSDPTKGGAPQIGAIGRVTYAAVNRDRYWLACIDALAHFTLFSGIGAGVARGYGQARLLDDDHTGARPHTTGQPDGLSA
>NC_009767.1|WP_157042610.1|2541093_2541246_+|hypothetical-protein
MPVSLIFTIRPLAAAEKPASLGLPVTIRHGQPEQREGSCATRLDSSLRSE
>NC_009767.1|WP_157042609.1|2540189_2540333_+|hypothetical-protein
MTHGHTVAFGRNRSDEAVADLRHTSQTPAPSSLGDRLASRRTRRSIG
>NC_009767.1|WP_012120494.1|2538726_2540193_+|hypothetical-protein
MHLLVLANIGNSDLIADSRRLQRPRADGEAAWQTFERHTFETPIIEPCVRWIIGRNGRIDRLILFYTDQPATPETLKPDRSGMSLRDKDTLWYARIIERLLRERFGDRIGHLECQAIRRIDGRNINPSIYDEAFDAYAGLVAPLVDAQTTCYVLMAGGIPACNTALQLNAISAFGDRCRVVYQPEGGQPYDLRVGDQVLNVFRRATAIDALERLDFATALPLVRQVADGAVAALVAYAHYRECFDFERAQTTLSHGIRQASGELRSFLANLEHDLDPLMLRSDIDALLRELVANATITFRNGRYADFLGRLFRFQEAALRFIIETKLGLPTDMSKERKATNLPEYRQRIDADPGLKAWLDARTIDGTPLRYDTPNIPTLQAMLDYLIDPASVKPDGAPYLPKDERGRLTGVKQRLDKITSLSQLRNQSVIAHGFAGVSRERLAEVYGGDPDALIADLREIVKLLGLSAQESPFEQIAGIAIEQLRHLT
>NC_009767.1|WP_012120493.1|2537002_2538433_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MALVRNQVVSLTVTTITPLHIGTGDRLAANLDYYVDGDATLVINADAALELVVETWQQRRVPYEEQLRRFNAELAQEEERIRRADERLRRQIEQFEESPPRRKDEYERQANRFREEAQRLKERKQRLAEHSANPPQPDDTGDLLPPELIAGSTFDQLVDGGLLPRDRLRERATVNGRPLVRYALNGRPASGEVYEQIKDVADRLYLPGSSLKGAIRSALAWDMAHSPAVAALQHAVKGGPKNADDAIEQEVFLGTLRTQRRINNTVRDVLRALRIGDSAPVAVAPDLLAVRIYRSRSAQGLIALEAIPVDVEFRAALQIEQYPFESGVARAVIDFGDWQRRLQPDELAAACRRRAGRLIDGELAYFNRQTDAAELVRFYADLRARLERMDARAFLLPIGWGAGWRSKTLDDRLRQGTDRDNAFAQIVQRHTLKKHKSAGFRPGDAFPETRKVIMRGALPWRPLGWVEARFDLNGER
>NC_009767.1|WP_012120492.1|2535860_2537003_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MNDLTVYALVPPPDRRTLCFHFGRQGIGLEETGETFPSDSLFAALVAQAATLDNADLDAEGIPAFARPFRNGNPPLFHSSLFPRLGDLPLLPRPALPLVTPDDDIRMRIGKRFKRLKYLSPALFADVCAGRPIADAPLMLQDGKVWITAAEARTLTVDPWRRQANESDEAWKRRLETTPIWSIVSEPYVTVDRVSCASAYYEVGRVTFAPGAGLALLVRFVDPAWRLRFEQLLDLLGHSGLGGRRASSGAFDWQPGKALDVTWGAAGGRAVLLSRYLPAQHEIAALRSDRAAYQLVNIGGWLFSPGHLPQRRQRVRMVAEGSVLDVRAANPRGQVVDVRPDYRKSKNPHPALGKNVGTPHPVYRSGLALTAPIPDWKEES
>NC_009767.1|WP_041331922.1|2535014_2535848_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MTERFVTLHGRIFLRADIELLTGLHIGGAAAGLEIGGLDKPVIRNPRTNEPYIPGSSLKGKLRSLMEKAHGAPQTFRVNEGVFVHAPESIAQYRQYQMIGGVFGVLPRWGPNGNRNAFTVPAPTRLAVRDVPLRAESREELKRLRTDLPFTEIKWEAAIDRVTSAAAPRQIERVPAGAVFGPAELVYSVYVGKEETPTGVAALFDTVIEALLHLEDDYLGGMGSRGNGQVRLKNLHISARRVRNGQYGDEMQFDSQPASLKELDRAALKTWLEKTFA
>NC_009767.1|WP_012120490.1|2534513_2534996_+|type-III-A-CRISPR-associated-protein-Csm2
MSNPRSEQRLTGDQLAQELAPQETLKRIITEDTTESIQALTATAERIGSRLARDVTTSQIRNIFGTVRAIEQDVKTIDDDRPLPLPVQRELQMLRPKLAYQYGRVQGRDDDPGKAAMGALTKILSDSIGLVGADTRRFRNFVDFFEAILAYHRRYGGRTN
>NC_009767.1|WP_049768818.1|2532276_2534517_+|hypothetical-protein
MHELAHRAALEALRFWVAAANREHAPAAPDAACDVVDRAARFVCGGDAPPCLDLTRPLATVFGSLQGASAAYVRRAPLALTDDILFPSTDARVDTAATDRLRAALRAADNQSAHLPLAPRIEALFFAFQRFAWCLPSPLAGVSLYDAARIHAAVAAALTADSGLLLVGGDVSGVQEFIYSISAAGATRQLRGRSFYLQLLTEACAHYVLHQAGMPFCNLLYAGGGRFYVLLPASFESRLGEWRRAIGRLLLDAHGGALYLAIGGVRFAPHDYSESTWQELTRRIDDVKRRRFADLDDATFARLFEPTQPEPPPDVEEQSAEPLDAMGESLADLGRQLARVALLSVEPVEPRAVSFDRGKAGWNDVLRVLGLNVELLDHLCAYRVDHSRRRRVLLIDDRDPQSIALGPQDVVGTRYTVAVAQLATDRDVAQYQALERDAGDEQTLRVGDVKPFNLLAEQSIGARRMGVLRMDVDDLGDLFGRRLSRPSGLAGLAVTAALSTTLSRYFEGWVGELCRRANDDGGAGGVYAVYSGGDDLFLVGSWHRMPRLAQQIRNDFARYVLGRAPNAGETLPITLSGGITLHAARYPLYQAADDAAEALDAAKRHARPDRHAKDAVTFLGRTLGWEHFGEAADLCAALVDLVQAQGVPRSLLMVIQTLDARFRQEQRRNRSGAAQFAYGPWVWQGAYQLTRVAERSPNGVKAQIERLRDRIVGNEGVPQRFIERAGLAARWAQLLVRERSNAKEER
>NC_009767.1|WP_012120488.1|2529901_2531317_-|hypothetical-protein
MRMLARLQAAMIVFLALVAYLMPAPVQAQTTLPQWYELRTQKFAILYADGDLARAEEYATFVDEVYDEITSIFSHAAPTPVTLRLYPTRRVYDAANPLAAPIQGIIAHADFRRNEVVVILDQTTAQSPEEIKNNVRHELTHIVLAELSSNRLNVGFHEGIAQYVERPTPDLERKATALRQALERDALLPWSALDDRDQIYGSPQIGYPQTLSIVAFLVERFSFVKLREFVTVSARSSGYRSALERTYGMPSTDLERMWREWLPSYLDGGFRHNALTEYDLTPIETLIADGRYAEAKRELELAIPWLRNTQQHDVLARAQDLLAQSEAGLYAEDLAQQTRAALEAHDYATAENLAKRALDAYMTLENQSRIETLTVYATIARRGLRATELLEQATALAGDWRTFADARIIADQAAAEFLSLGNQENAARALTLRAEIDRVQSLAGIALLIIGLAGIAVGFTRRLIVREAEVW
>NC_009767.1|WP_012120497.1|2543681_2543963_+|CRISPR-associated-endonuclease-Cas2
MLYVIAYDIPDDARRLKLANVLEGFGQRVQRSVFECDLTEREYRALIKKVERVVNLNEGDSVRIYRLCGACVANVDVRGEGPPVEKSVDIYIV
>NC_009767.1|WP_157042611.1|2550397_2551408_+|hypothetical-protein
MLSVDDIRAVIQSVVGHDVGAIAALCHASSSVQAALTPDVLRALAHRVTSDPFSAARVLCDAPMSVWKALDAESIRMMAHAVASRYDCAIMVAMSTSSAIWKVLDDDAIRSLARGILPLCDDAMLGVSLMGSSVPALWTKLTAEEAHPFVQATARDMFLATEMLITAPDDFLTTLFADDLRALVMSSAQHSITAAHTLLGVRNAVWASLDGQTKDSLIHAALRDPGAFVDVLQTMSATPLLSWKPEIFLWLNDAAPERWTAVLPVLPDETLYEALMAMSNDVLQRRDTRDTLMTIARRDGADVIRRALRARARRLVPTSILPPSTEDKRTKGDRRG
>NC_009767.1|WP_012120499.1|2552107_2552740_+|orotate-phosphoribosyltransferase
MTTDIAYEIAATLLEAGALLIRPREPFIFASGLRSPIYCDNRMLLGDVAARRIVTRGFAAQCADAQVVAGPATGGIAWAAWVAEALSIPMAYVRSGAKGHGRGRQVEGATVRDRRVALLEDTVSTGESALQAADALRAEGALVTHCVCIFTWGWADTEARFAAAHLHLVPLATLPAVLDVAQRTGRLTPEARALVESWAANPRAWMPPEA
>NC_009767.1|WP_012120500.1|2552773_2553898_+|glycosyltransferase
MSRTSIVPTLSDHCSTPHLSVVWQSRWGIPIGYAVSSEALALALAARGVELSYRPTPWHMPGTIRYPALLAAAARAPRDDVPQVSYDQADLFYTRHAGYKIGYTMLEVDGLPREWVAACNAMDEVWTPSRWGATVFANAGVTRPIYVMPLGYDPVCFRPDGPARRIAERFTFLSVFEWGERKAPDILLRAYAASFTRRDDVALLLRVNNFDAEVDVARQIAALRLPADAPPIALLYNRYISDESLGALYRSADCFVLPTRGEGWGLPILEAMACGLPVIATDWSGQTEFFHGGVGYPVRVRRLVAADAKCPYYLGWRWAEPDIEHLIALMRHVYEHPNEARVVGARAAQEAATRWTWAHAAERIHRRLMDATDG
>NC_009767.1|WP_041330577.1|2554332_2554539_-|hypothetical-protein
MPHSLQTPSPFVRSFCGAALLNLLPCLIVCLRHRALRPGLGGVVRDMPRHPAPVGFYAQEQRSIERLS
>NC_009767.1|WP_012120502.1|2554643_2555816_+|iron-containing-alcohol-dehydrogenase
MMPPREFLMPAQVLIGSGAAEQVGAQCQKRGWKKALIVSDKIMLSLGLVGKVEQYLADSGIASAVYAGVNTEPVVEYVQEGLQVYKEGNCDFVVAVGGGSPIDTAKAIAVLVTNPGSIEQYKGIGKIGAPGVPVVAIPTTAGTGSEATVYTVITDQKTDVKMLIGSPYLMPTIAIVDPMLTVSSPQSVTAATGVDALVHAIEAYVSVKRQPMTDIFCLSAIRLIAQSIRQAWANGNNMEAREQMMLGAFQAGVAFSNSSVALVHGMSRPIGAHFHIAHGVSNAALLAVVTEFSLIGDPLRYAQIAEAMGEPVQGLSMMEAADRVVHAIRRLVSDIKIPSLRQLGVERERLIELAPSMADAAIDSGSPANNPRKPTRQEIIDLYVKAYDEA
>NC_009767.1|WP_041330579.1|2555951_2557322_+|DUF2079-domain-containing-protein
MKPIYDPIQVRRYVISGILIVATFFLTIAALLKESDAAYHSAILIDFYPVERNNSGEYRFTQPRSHIFIPPFVSDAVALSFRTYSPGPLPERTLTLRLDERTFVSLASGHSVRRLLLVLSPAGVGAGQLLTLETAPAEAPGDLRRLGVFTANIELQPLNPHIYQRFALVVLAPVTASLLLLVMRCGVLASACSAALVAGMVLWGWTIAWGATFGLGVILVFDRMLNCGRGMFWLRQSIDQLLSCLSLPDMVISTLILIWISTVGWSSLAIHERYATGAYDLGLFDQWLWLISRGLTPYSTGIGVHLLGDHAAVLLYPLATLYLFVPDVRALLLVQVLAVGMGGLALYRIGSTRGSSWMGALVAGAYLLHPSTHNMALFHFHPDALAAAALLIVLLGIERRNATMMAVAVVVCAAKENFALTTALLGAWLVIRGERRLGSALFFGSLAWFSIATFLI
>NC_009767.1|WP_012120504.1|2557325_2558177_+|DUF2079-domain-containing-protein
MFNGQSQSVFASRFDRYGATPGDILRSIFLRPDRVVLDLFHSENLHYLALVLAPLGMLPLLSPLHAALALPALTLNMLSNYDAQRSLLFHYDALPVALVSYACLDAAIMLRGWWKPRVAFVVCALCIICGACWTVAAVPLRIQDALFPAVRDVEWSYVRRYILTYIPRDAAVSVSPALHPHLMHRTQAFVFPNPFVRIHYVNPAGAPQPPSIDWIVHDYYGMGRATANRERELLSDLERRKLFVPVMRVGTITLMKRTDSSLPASCFGAGWQSVDCLSAYQNR
>NC_009767.1|WP_157042813.1|2558278_2558686_+|hypothetical-protein
MECGAKKPPLFLAISAADNEPLAAQIERAIHERRLAVVDLPLLTDVAQGDPYLAEQLAALHAQWEVRPQPSRGLLDRLRRRIAWWLLEPEIRQINAVHATLTRLIDSLIVLADRERAARRRIEEYQAHTSAEPLQ
>NC_009767.1|WP_012120506.1|2559647_2561591_+|PhoX-family-phosphatase
MGGRDEQDKLIVRSVEGKGKEFERILEERLSRRDFLKAAAVTSGLVVAATAMNADVAAAQTRPAPLPPKFGKVAPTTPEVDEIAVPDGYYAATLIRWGEPIFADAPEFDVWTQTKEKQEKQFGYNCDYVGYFPLPSYTSNNSTRGLLVVNHEYTNPELMFPGYDVENPNPTRTQVDVELAAHGVSVIEVARGRDGRWNVVRNSPYNRRLTGYTPMTVSGPAADHEWMKTNADPTGRNVLGTLNNCAGGKTPWGTVLTAEENFHQYFANLRAMPNSDYRKAIHNRYGMPSGASERRWENFHDRFDIAKEPNEGFRFGWIVEFDPYNPNSVPVKRTALGRFRHEAATIVIAPSGQVVAYSGDDARGEYVYKFVSNGRYNPRNRAANFNLLDDGTLYVARFNADGTGEWLPLKHGFGPLNEGNGFMSQGDVLIKTRNAADALGATKMDRPEDIETNPVNKKVYIILTNNSQRGVGNGPPVDAANPRANNRAGHIIELTEEGNNHAATRFTWNIFILAGLPTDESTYFAGYDKSKVSPIGAPDNIVFDLAGNAWVATDGAASAIKLNDGLFAIPVAGSERGHVQQFFSSVAGSEVCGPEFTPDNRTLFLAIQHPGEGGTFDKPISTWPDRQGLARPSVITIQAFDNRRIGR

Crispr_ID: NC_009767_49

• CRISPR_ID: NC_009767_49
• CRISPR_location: 2544138-2549358
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 68 spacers
• Cas_protein_info: cas2,cas1,cas6,csx1,csm5gr7,csm4gr5,csm3gr7,csm2gr11,Cas9_archaeal

Consensus repeat of NC_009767_49

Consensus_repeat	Method
GTGGAAAAACCCCAAATCCCCGCC----AGGGGATTGAAAC	PILER-CR
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CRISPRCasFinder
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CRT

spacers of NC_009767_49

>49.1|2544175|41|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGCGCCAACTGATCGCGAATATCCGCTGCGGTGCCGATTTC
>49.2|2544253|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTGCTTGCGCTGTCGGTCATCGAGAGCGCGCCGCTTGCGG
>49.3|2544330|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTATCCAGACCATCAATGCTACGACGAGCAATGTTGCC
>49.4|2544405|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTCAATCAACTGCTGCGTTATCGTTATCATCGCTCTAA
>49.5|2544480|41|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AAAGAAACAAACGAAGAGCCGCCGAAATGGAGAGGGAGGTG
>49.6|2544558|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTGAGAATTTCCATCTCCTCCTCTGTCAGCAGCGCGCGCA
>49.7|2544635|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTCTCCATATTCGCTCCTTTGTTAATGTACCCGGC
>49.8|2544707|43|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTAGTAATAGTCGCCGTAGCCACCGAGTTGTCTATAGAACGAC
>49.9|2544787|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTCCTCCGATAAGAGGAATGTACAGCGAGGTGGCGGA
>49.10|2544861|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GGTTCACAATCGGCTCGATCTTACCAATCTCCCTCG
>49.11|2544934|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTTCCCCCCCCCTATATTTCAGCCTCTTTGGAGGCTAGGG
>49.12|2545011|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTTCGTGCCGCTTCCGCTTGCGGCGATCACAACAGCGCGA
>49.13|2545088|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GAAACGCTGCGGGCCTCAATGCCGGATTGTCCGCCCAGTG
>49.14|2545165|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ACATGAACCCCATCGTCTCGATTGACAAGACCGACCG
>49.15|2545239|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ACTATTCTGTCCTCTCGGACAAATGTGGTGGAAAAA
>49.16|2545312|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AAGGGGACCAAGTAAATGATCCGCTATCGTGCTCAAAAC
>49.17|2545388|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCAACTCGAAAGTTGAGCGTGAACGCGATAAGAAATGCCG
>49.18|2545465|42|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GGGCTGTACGCGGATATCTTCCCCGATCTCTCGCCCAGAGAG
>49.19|2545544|44|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TACCATATCGCTACGGTAATTAAAGGTGAGCGCCACCGATCTAA
>49.20|2545625|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCGCTATAAGCGCGAGATCCACCTCCTGAAACGAGGG
>49.21|2545699|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AATCGAGTAAACCGTGGAATAGTCTGTTTTTAATTCGGA
>49.22|2545775|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CATTTGTTGCGCTAGTCGATTGTTTCGAGAAGTTCAAT
>49.23|2545850|45|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCAACAGCAGCGTGGCTGTTGCTGTTAACCCAGGCTGGCGACTGT
>49.24|2545932|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GGGCTTGACCTCGTCGGTCAAGCTCCAGCCTTTGGTGGCG
>49.25|2546009|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGTGTTCTCGACGCAGGGGATCGAGGGGGTGGAACAAC
>49.26|2546085|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GATAAGGTAGGTAAAATATTCCTCCTTTCCGAGGAAA
>49.27|2546159|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTCGGTTTCTGCGGTTGAGATGGCGCGGGCGGCAT
>49.28|2546231|43|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGGAGAAAACCACCTGCGGGTTTTCTCTAATCTGGTGGGCGAG
>49.29|2546311|45|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGCCCGCCGTCTGCCGCGCCTTCAGCGGGCGCGGCGCGGGAGCGG
>49.30|2546393|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTGGCGTTCGGGAGCATGATCGTCTTGGCGGAGGCATGG
>49.31|2546469|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCGGATTGACCTAAGCCTGGTCGAGTAGGAACTCCCTCAA
>49.32|2546546|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ACGGACGCGCATGGCAAATTGCCAAAACGCAACCAG
>49.33|2546619|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCAAAGACCCATATAATCATTCCCCTCTGTGTCT
>49.34|2546690|43|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TACCAGATCGGGTAAAACCGGTTCTGGTACCGAATTTCTAGTG
>49.35|2546770|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGGGCGCAAACTCGCCGCTGTGCAACTGATAACGATACT
>49.36|2546846|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTTCGCCGTCGATTTCGCTCACGCACAGGCGGGCGACGAC
>49.37|2546923|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCAAATCATCGACGAGTCTGGAAATGATGTGACATCTCTG
>49.38|2547000|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TAAATACGCGATTGCGTATTACTGGAATGGGGAACTTTT
>49.39|2547076|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTTACATTCCCAGCGGTGTACGTCGAGCATTTTGG
>49.40|2547148|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATGTCGGCGTGGCGGCGCTGTACCGCACTGCGCCGGAGG
>49.41|2547224|42|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTTCGTCAAGACCTCCATTTCCTCCTCTGTCAGCAGCGCCCG
>49.42|2547303|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGCCTCCCGCAAGCTCCTCCTCGAATCCCCACGAAAAC
>49.43|2547379|41|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTTGTTCGAGATACGGCGGATAGATACGCTGATAAGTTAAA
>49.44|2547457|43|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTACAAACCCCCCCACCCCGACGCCTAAAAGCAAGTTCAGTGC
>49.45|2547537|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ACAACGCACCTTCATGCTCCAAGAGCATGTAATCGC
>49.46|2547610|41|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGTATTTGCGCCTTCGACCACAGAAACTGCTATATAAGCAG
>49.47|2547688|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GAAGAACACAAAAACATATTAGAAAAATTAAAACGAG
>49.48|2547762|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GGCAATGTTGATGTCCAACCAGACATAGTTTCTGGCGCT
>49.49|2547838|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTGATAAGACTGACCGTTACGCGAGCCTTCATGATT
>49.50|2547911|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCAAGTATCATTGATCACCACCTTCATAAGAGCGATGAA
>49.51|2547987|41|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGACATCCACGCCCGCAGGAAACGCCACCCGCGCCATCTCG
>49.52|2548065|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTTAATAAACGCGCATTGTCGACCAAGCGACTACGGCA
>49.53|2548140|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGAAGCCACTCTCGCGCAGGCGCGCGCGGCGGCGTATG
>49.54|2548215|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTCCTCGCTGTTCGGGTCACGAAGCAATCGCCGCATCTTC
>49.55|2548292|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCCAAGTTAGCCGCCGGTCTCGTATCGACCGCCCATTGTT
>49.56|2548369|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TACAGCCTAATCAGGCTGTACGCGACGATCTCATAAG
>49.57|2548443|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCAAGGAAACTCACAATTGCTTAATCTTAGAAACA
>49.58|2548515|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATTGAAAATGCGCCGGCTGGCATCGTCACGGTGCTAAA
>49.59|2548590|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TAAGGGTGTACGCGGCGATTTCGTAGGTAAGCCAAACAA
>49.60|2548666|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AACGGCGGACATATCCGCCGAAATTGAAGAGGCGATGAA
>49.61|2548742|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTGAGCGAGTTTTTCGGTGTGAAACGCTACCTCAGG
>49.62|2548815|41|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTAAATTATTACTGACGCAACAAAAGCATTGTTTACAAAAA
>49.63|2548893|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AGAAAACCCCCGAATGACCAACCGAACCTGCACACCGTAC
>49.64|2548970|42|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCGTTCTCGATGCCTTCGATGCTTTCGGGTGGTGTCTCGCTG
>49.65|2549049|44|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGTCTCGCGCCGCCTCCACTGCGCGCTCCGCGTCAATAATCGC
>49.66|2549130|36|NC_009767|CRISPRCasFinder,CRT
GTACAGGAACGCGTGTACGCTTATCCCGTGAACTCA
>49.67|2549203|41|NC_009767|CRISPRCasFinder,CRT
CGCAACCGCCGCGCGATATGCGACGCCTCGGTCCACGTAAA
>49.68|2549281|41|NC_009767|CRISPRCasFinder,CRT
CCCCGTGCGGGCTGCGAAATACATCGCCCGCGCTCGTTCGA

CRISPR arrays and Neighbor proteins around NC_009767_49

CRISPR arrays

The CRISPR arrays of NC_009767_49

>merge|NC_009767|49|2544138-2549358|PILER-CR,CRISPRCasFinder,CRT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCGCGCCAACTGATCGCGAATATCCGCTGCGGTGCCGATTTCGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTTGCTTGCGCTGTCGGTCATCGAGAGCGCGCCGCTTGCGGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTTATCCAGACCATCAATGCTACGACGAGCAATGTTGCCGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGTCAATCAACTGCTGCGTTATCGTTATCATCGCTCTAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACAAAGAAACAAACGAAGAGCCGCCGAAATGGAGAGGGAGGTGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGTGAGAATTTCCATCTCCTCCTCTGTCAGCAGCGCGCGCAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCTCTCCATATTCGCTCCTTTGTTAATGTACCCGGCGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGTAGTAATAGTCGCCGTAGCCACCGAGTTGTCTATAGAACGACGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCTCCTCCGATAAGAGGAATGTACAGCGAGGTGGCGGAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGGTTCACAATCGGCTCGATCTTACCAATCTCCCTCGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTTTCCCCCCCCCTATATTTCAGCCTCTTTGGAGGCTAGGGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTTTCGTGCCGCTTCCGCTTGCGGCGATCACAACAGCGCGAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGAAACGCTGCGGGCCTCAATGCCGGATTGTCCGCCCAGTGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACACATGAACCCCATCGTCTCGATTGACAAGACCGACCGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACACTATTCTGTCCTCTCGGACAAATGTGGTGGAAAAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACAAGGGGACCAAGTAAATGATCCGCTATCGTGCTCAAAACGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTCAACTCGAAAGTTGAGCGTGAACGCGATAAGAAATGCCGGTGGAAAACCCCCAAATCCCCGCCAGGGGATTGAAACGGGCTGTACGCGGATATCTTCCCCGATCTCTCGCCCAGAGAGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTACCATATCGCTACGGTAATTAAAGGTGAGCGCCACCGATCTAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCCGCTATAAGCGCGAGATCCACCTCCTGAAACGAGGGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACAATCGAGTAAACCGTGGAATAGTCTGTTTTTAATTCGGAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCATTTGTTGCGCTAGTCGATTGTTTCGAGAAGTTCAATGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTCAACAGCAGCGTGGCTGTTGCTGTTAACCCAGGCTGGCGACTGTGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGGGCTTGACCTCGTCGGTCAAGCTCCAGCCTTTGGTGGCGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTCGTGTTCTCGACGCAGGGGATCGAGGGGGTGGAACAACGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGATAAGGTAGGTAAAATATTCCTCCTTTCCGAGGAAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCTCGGTTTCTGCGGTTGAGATGGCGCGGGCGGCATGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTGGAGAAAACCACCTGCGGGTTTTCTCTAATCTGGTGGGCGAGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCGCCCGCCGTCTGCCGCGCCTTCAGCGGGCGCGGCGCGGGAGCGGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTTGGCGTTCGGGAGCATGATCGTCTTGGCGGAGGCATGGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCCGGATTGACCTAAGCCTGGTCGAGTAGGAACTCCCTCAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACACGGACGCGCATGGCAAATTGCCAAAACGCAACCAGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTCAAAGACCCATATAATCATTCCCCTCTGTGTCTGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTACCAGATCGGGTAAAACCGGTTCTGGTACCGAATTTCTAGTGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCGGGCGCAAACTCGCCGCTGTGCAACTGATAACGATACTGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGTTCGCCGTCGATTTCGCTCACGCACAGGCGGGCGACGACGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGCAAATCATCGACGAGTCTGGAAATGATGTGACATCTCTGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTAAATACGCGATTGCGTATTACTGGAATGGGGAACTTTTGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCTTACATTCCCAGCGGTGTACGTCGAGCATTTTGGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACATGTCGGCGTGGCGGCGCTGTACCGCACTGCGCCGGAGGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTTTCGTCAAGACCTCCATTTCCTCCTCTGTCAGCAGCGCCCGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTCGCCTCCCGCAAGCTCCTCCTCGAATCCCCACGAAAACGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTTTGTTCGAGATACGGCGGATAGATACGCTGATAAGTTAAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGTACAAACCCCCCCACCCCGACGCCTAAAAGCAAGTTCAGTGCGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACACAACGCACCTTCATGCTCCAAGAGCATGTAATCGCGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCGTATTTGCGCCTTCGACCACAGAAACTGCTATATAAGCAGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGAAGAACACAAAAACATATTAGAAAAATTAAAACGAGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGGCAATGTTGATGTCCAACCAGACATAGTTTCTGGCGCTGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTTGATAAGACTGACCGTTACGCGAGCCTTCATGATTGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTCAAGTATCATTGATCACCACCTTCATAAGAGCGATGAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCGACATCCACGCCCGCAGGAAACGCCACCCGCGCCATCTCGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGTTAATAAACGCGCATTGTCGACCAAGCGACTACGGCAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCGAAGCCACTCTCGCGCAGGCGCGCGCGGCGGCGTATGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCTCCTCGCTGTTCGGGTCACGAAGCAATCGCCGCATCTTCGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGCCAAGTTAGCCGCCGGTCTCGTATCGACCGCCCATTGTTGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTACAGCCTAATCAGGCTGTACGCGACGATCTCATAAGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCCAAGGAAACTCACAATTGCTTAATCTTAGAAACAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACATTGAAAATGCGCCGGCTGGCATCGTCACGGTGCTAAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTAAGGGTGTACGCGGCGATTTCGTAGGTAAGCCAAACAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACAACGGCGGACATATCCGCCGAAATTGAAGAGGCGATGAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTTGAGCGAGTTTTTCGGTGTGAAACGCTACCTCAGGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGTAAATTATTACTGACGCAACAAAAGCATTGTTTACAAAAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACAGAAAACCCCCGAATGACCAACCGAACCTGCACACCGTACGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGCGTTCTCGATGCCTTCGATGCTTTCGGGTGGTGTCTCGCTGGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACTCGTCTCGCGCCGCCTCCACTGCGCGCTCCGCGTCAATAATCGCGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACGTACAGGAACGCGTGTACGCTTATCCCGTGAACTCAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCGCAACCGCCGCGCGATATGCGACGCCTCGGTCCACGTAAAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAACCCCCGTGCGGGCTGCGAAATACATCGCCCGCGCTCGTTCGAGTGGAAAAACCCCAAATCCCCGCCAGGGGATTGGCGT

>NC_009767|49|6|2544138-2549129|PILER-CR
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGCGCCAACTGATCGCGAATATCCGCTGCGGTGCCGATTTC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGCTTGCGCTGTCGGTCATCGAGAGCGCGCCGCTTGCGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTATCCAGACCATCAATGCTACGACGAGCAATGTTGCC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTCAATCAACTGCTGCGTTATCGTTATCATCGCTCTAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AAAGAAACAAACGAAGAGCCGCCGAAATGGAGAGGGAGGTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTGAGAATTTCCATCTCCTCCTCTGTCAGCAGCGCGCGCA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCTCCATATTCGCTCCTTTGTTAATGTACCCGGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTAGTAATAGTCGCCGTAGCCACCGAGTTGTCTATAGAACGAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCCTCCGATAAGAGGAATGTACAGCGAGGTGGCGGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GGTTCACAATCGGCTCGATCTTACCAATCTCCCTCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTCCCCCCCCCTATATTTCAGCCTCTTTGGAGGCTAGGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTCGTGCCGCTTCCGCTTGCGGCGATCACAACAGCGCGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GAAACGCTGCGGGCCTCAATGCCGGATTGTCCGCCCAGTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACATGAACCCCATCGTCTCGATTGACAAGACCGACCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACTATTCTGTCCTCTCGGACAAATGTGGTGGAAAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AAGGGGACCAAGTAAATGATCCGCTATCGTGCTCAAAAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAACTCGAAAGTTGAGCGTGAACGCGATAAGAAATGCCG
GTGGAAAACCCCCAAATCCCCGCCAGGGGATTGAAAC	GGGCTGTACGCGGATATCTTCCCCGATCTCTCGCCCAGAGAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TACCATATCGCTACGGTAATTAAAGGTGAGCGCCACCGATCTAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCGCTATAAGCGCGAGATCCACCTCCTGAAACGAGGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AATCGAGTAAACCGTGGAATAGTCTGTTTTTAATTCGGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CATTTGTTGCGCTAGTCGATTGTTTCGAGAAGTTCAAT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAACAGCAGCGTGGCTGTTGCTGTTAACCCAGGCTGGCGACTGT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GGGCTTGACCTCGTCGGTCAAGCTCCAGCCTTTGGTGGCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCGTGTTCTCGACGCAGGGGATCGAGGGGGTGGAACAAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GATAAGGTAGGTAAAATATTCCTCCTTTCCGAGGAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCGGTTTCTGCGGTTGAGATGGCGCGGGCGGCAT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TGGAGAAAACCACCTGCGGGTTTTCTCTAATCTGGTGGGCGAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGCCCGCCGTCTGCCGCGCCTTCAGCGGGCGCGGCGCGGGAGCGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGGCGTTCGGGAGCATGATCGTCTTGGCGGAGGCATGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCGGATTGACCTAAGCCTGGTCGAGTAGGAACTCCCTCAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACGGACGCGCATGGCAAATTGCCAAAACGCAACCAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAAAGACCCATATAATCATTCCCCTCTGTGTCT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TACCAGATCGGGTAAAACCGGTTCTGGTACCGAATTTCTAGTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGGGCGCAAACTCGCCGCTGTGCAACTGATAACGATACT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTTCGCCGTCGATTTCGCTCACGCACAGGCGGGCGACGAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GCAAATCATCGACGAGTCTGGAAATGATGTGACATCTCTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TAAATACGCGATTGCGTATTACTGGAATGGGGAACTTTT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTTACATTCCCAGCGGTGTACGTCGAGCATTTTGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ATGTCGGCGTGGCGGCGCTGTACCGCACTGCGCCGGAGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTCGTCAAGACCTCCATTTCCTCCTCTGTCAGCAGCGCCCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCGCCTCCCGCAAGCTCCTCCTCGAATCCCCACGAAAAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTGTTCGAGATACGGCGGATAGATACGCTGATAAGTTAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTACAAACCCCCCCACCCCGACGCCTAAAAGCAAGTTCAGTGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACAACGCACCTTCATGCTCCAAGAGCATGTAATCGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGTATTTGCGCCTTCGACCACAGAAACTGCTATATAAGCAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GAAGAACACAAAAACATATTAGAAAAATTAAAACGAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GGCAATGTTGATGTCCAACCAGACATAGTTTCTGGCGCT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGATAAGACTGACCGTTACGCGAGCCTTCATGATT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAAGTATCATTGATCACCACCTTCATAAGAGCGATGAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGACATCCACGCCCGCAGGAAACGCCACCCGCGCCATCTCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTTAATAAACGCGCATTGTCGACCAAGCGACTACGGCA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGAAGCCACTCTCGCGCAGGCGCGCGCGGCGGCGTATG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCCTCGCTGTTCGGGTCACGAAGCAATCGCCGCATCTTC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GCCAAGTTAGCCGCCGGTCTCGTATCGACCGCCCATTGTT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TACAGCCTAATCAGGCTGTACGCGACGATCTCATAAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCAAGGAAACTCACAATTGCTTAATCTTAGAAACA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ATTGAAAATGCGCCGGCTGGCATCGTCACGGTGCTAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TAAGGGTGTACGCGGCGATTTCGTAGGTAAGCCAAACAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AACGGCGGACATATCCGCCGAAATTGAAGAGGCGATGAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGAGCGAGTTTTTCGGTGTGAAACGCTACCTCAGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTAAATTATTACTGACGCAACAAAAGCATTGTTTACAAAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AGAAAACCCCCGAATGACCAACCGAACCTGCACACCGTAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GCGTTCTCGATGCCTTCGATGCTTTCGGGTGGTGTCTCGCTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCGTCTCGCGCCGCCTCCACTGCGCGCTCCGCGTCAATAATCGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC

>NC_009767|49|42|2544138-2549358|CRISPRCasFinder
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGCGCCAACTGATCGCGAATATCCGCTGCGGTGCCGATTTC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGCTTGCGCTGTCGGTCATCGAGAGCGCGCCGCTTGCGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTATCCAGACCATCAATGCTACGACGAGCAATGTTGCC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTCAATCAACTGCTGCGTTATCGTTATCATCGCTCTAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AAAGAAACAAACGAAGAGCCGCCGAAATGGAGAGGGAGGTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTGAGAATTTCCATCTCCTCCTCTGTCAGCAGCGCGCGCA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCTCCATATTCGCTCCTTTGTTAATGTACCCGGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTAGTAATAGTCGCCGTAGCCACCGAGTTGTCTATAGAACGAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCCTCCGATAAGAGGAATGTACAGCGAGGTGGCGGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GGTTCACAATCGGCTCGATCTTACCAATCTCCCTCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTCCCCCCCCCTATATTTCAGCCTCTTTGGAGGCTAGGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTCGTGCCGCTTCCGCTTGCGGCGATCACAACAGCGCGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GAAACGCTGCGGGCCTCAATGCCGGATTGTCCGCCCAGTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACATGAACCCCATCGTCTCGATTGACAAGACCGACCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACTATTCTGTCCTCTCGGACAAATGTGGTGGAAAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AAGGGGACCAAGTAAATGATCCGCTATCGTGCTCAAAAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAACTCGAAAGTTGAGCGTGAACGCGATAAGAAATGCCG
GTGGAAAACCCCCAAATCCCCGCCAGGGGATTGAAAC	GGGCTGTACGCGGATATCTTCCCCGATCTCTCGCCCAGAGAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TACCATATCGCTACGGTAATTAAAGGTGAGCGCCACCGATCTAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCGCTATAAGCGCGAGATCCACCTCCTGAAACGAGGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AATCGAGTAAACCGTGGAATAGTCTGTTTTTAATTCGGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CATTTGTTGCGCTAGTCGATTGTTTCGAGAAGTTCAAT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAACAGCAGCGTGGCTGTTGCTGTTAACCCAGGCTGGCGACTGT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GGGCTTGACCTCGTCGGTCAAGCTCCAGCCTTTGGTGGCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCGTGTTCTCGACGCAGGGGATCGAGGGGGTGGAACAAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GATAAGGTAGGTAAAATATTCCTCCTTTCCGAGGAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCGGTTTCTGCGGTTGAGATGGCGCGGGCGGCAT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TGGAGAAAACCACCTGCGGGTTTTCTCTAATCTGGTGGGCGAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGCCCGCCGTCTGCCGCGCCTTCAGCGGGCGCGGCGCGGGAGCGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGGCGTTCGGGAGCATGATCGTCTTGGCGGAGGCATGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCGGATTGACCTAAGCCTGGTCGAGTAGGAACTCCCTCAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACGGACGCGCATGGCAAATTGCCAAAACGCAACCAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAAAGACCCATATAATCATTCCCCTCTGTGTCT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TACCAGATCGGGTAAAACCGGTTCTGGTACCGAATTTCTAGTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGGGCGCAAACTCGCCGCTGTGCAACTGATAACGATACT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTTCGCCGTCGATTTCGCTCACGCACAGGCGGGCGACGAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GCAAATCATCGACGAGTCTGGAAATGATGTGACATCTCTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TAAATACGCGATTGCGTATTACTGGAATGGGGAACTTTT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTTACATTCCCAGCGGTGTACGTCGAGCATTTTGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ATGTCGGCGTGGCGGCGCTGTACCGCACTGCGCCGGAGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTCGTCAAGACCTCCATTTCCTCCTCTGTCAGCAGCGCCCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCGCCTCCCGCAAGCTCCTCCTCGAATCCCCACGAAAAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTGTTCGAGATACGGCGGATAGATACGCTGATAAGTTAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTACAAACCCCCCCACCCCGACGCCTAAAAGCAAGTTCAGTGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACAACGCACCTTCATGCTCCAAGAGCATGTAATCGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGTATTTGCGCCTTCGACCACAGAAACTGCTATATAAGCAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GAAGAACACAAAAACATATTAGAAAAATTAAAACGAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GGCAATGTTGATGTCCAACCAGACATAGTTTCTGGCGCT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGATAAGACTGACCGTTACGCGAGCCTTCATGATT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAAGTATCATTGATCACCACCTTCATAAGAGCGATGAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGACATCCACGCCCGCAGGAAACGCCACCCGCGCCATCTCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTTAATAAACGCGCATTGTCGACCAAGCGACTACGGCA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGAAGCCACTCTCGCGCAGGCGCGCGCGGCGGCGTATG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCCTCGCTGTTCGGGTCACGAAGCAATCGCCGCATCTTC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GCCAAGTTAGCCGCCGGTCTCGTATCGACCGCCCATTGTT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TACAGCCTAATCAGGCTGTACGCGACGATCTCATAAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCAAGGAAACTCACAATTGCTTAATCTTAGAAACA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ATTGAAAATGCGCCGGCTGGCATCGTCACGGTGCTAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TAAGGGTGTACGCGGCGATTTCGTAGGTAAGCCAAACAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AACGGCGGACATATCCGCCGAAATTGAAGAGGCGATGAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGAGCGAGTTTTTCGGTGTGAAACGCTACCTCAGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTAAATTATTACTGACGCAACAAAAGCATTGTTTACAAAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AGAAAACCCCCGAATGACCAACCGAACCTGCACACCGTAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GCGTTCTCGATGCCTTCGATGCTTTCGGGTGGTGTCTCGCTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCGTCTCGCGCCGCCTCCACTGCGCGCTCCGCGTCAATAATCGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTACAGGAACGCGTGTACGCTTATCCCGTGAACTCA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGCAACCGCCGCGCGATATGCGACGCCTCGGTCCACGTAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCCCGTGCGGGCTGCGAAATACATCGCCCGCGCTCGTTCGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGGCGT

>NC_009767|49|7|2544138-2549358|CRT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGCGCCAACTGATCGCGAATATCCGCTGCGGTGCCGATTTC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGCTTGCGCTGTCGGTCATCGAGAGCGCGCCGCTTGCGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTATCCAGACCATCAATGCTACGACGAGCAATGTTGCC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTCAATCAACTGCTGCGTTATCGTTATCATCGCTCTAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AAAGAAACAAACGAAGAGCCGCCGAAATGGAGAGGGAGGTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTGAGAATTTCCATCTCCTCCTCTGTCAGCAGCGCGCGCA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCTCCATATTCGCTCCTTTGTTAATGTACCCGGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTAGTAATAGTCGCCGTAGCCACCGAGTTGTCTATAGAACGAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCCTCCGATAAGAGGAATGTACAGCGAGGTGGCGGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GGTTCACAATCGGCTCGATCTTACCAATCTCCCTCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTCCCCCCCCCTATATTTCAGCCTCTTTGGAGGCTAGGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTCGTGCCGCTTCCGCTTGCGGCGATCACAACAGCGCGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GAAACGCTGCGGGCCTCAATGCCGGATTGTCCGCCCAGTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACATGAACCCCATCGTCTCGATTGACAAGACCGACCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACTATTCTGTCCTCTCGGACAAATGTGGTGGAAAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AAGGGGACCAAGTAAATGATCCGCTATCGTGCTCAAAAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAACTCGAAAGTTGAGCGTGAACGCGATAAGAAATGCCG
GTGGAAAACCCCCAAATCCCCGCCAGGGGATTGAAAC	GGGCTGTACGCGGATATCTTCCCCGATCTCTCGCCCAGAGAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TACCATATCGCTACGGTAATTAAAGGTGAGCGCCACCGATCTAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCGCTATAAGCGCGAGATCCACCTCCTGAAACGAGGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AATCGAGTAAACCGTGGAATAGTCTGTTTTTAATTCGGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CATTTGTTGCGCTAGTCGATTGTTTCGAGAAGTTCAAT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAACAGCAGCGTGGCTGTTGCTGTTAACCCAGGCTGGCGACTGT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GGGCTTGACCTCGTCGGTCAAGCTCCAGCCTTTGGTGGCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCGTGTTCTCGACGCAGGGGATCGAGGGGGTGGAACAAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GATAAGGTAGGTAAAATATTCCTCCTTTCCGAGGAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCGGTTTCTGCGGTTGAGATGGCGCGGGCGGCAT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TGGAGAAAACCACCTGCGGGTTTTCTCTAATCTGGTGGGCGAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGCCCGCCGTCTGCCGCGCCTTCAGCGGGCGCGGCGCGGGAGCGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGGCGTTCGGGAGCATGATCGTCTTGGCGGAGGCATGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCGGATTGACCTAAGCCTGGTCGAGTAGGAACTCCCTCAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACGGACGCGCATGGCAAATTGCCAAAACGCAACCAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAAAGACCCATATAATCATTCCCCTCTGTGTCT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TACCAGATCGGGTAAAACCGGTTCTGGTACCGAATTTCTAGTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGGGCGCAAACTCGCCGCTGTGCAACTGATAACGATACT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTTCGCCGTCGATTTCGCTCACGCACAGGCGGGCGACGAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GCAAATCATCGACGAGTCTGGAAATGATGTGACATCTCTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TAAATACGCGATTGCGTATTACTGGAATGGGGAACTTTT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTTACATTCCCAGCGGTGTACGTCGAGCATTTTGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ATGTCGGCGTGGCGGCGCTGTACCGCACTGCGCCGGAGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTCGTCAAGACCTCCATTTCCTCCTCTGTCAGCAGCGCCCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCGCCTCCCGCAAGCTCCTCCTCGAATCCCCACGAAAAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTTGTTCGAGATACGGCGGATAGATACGCTGATAAGTTAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTACAAACCCCCCCACCCCGACGCCTAAAAGCAAGTTCAGTGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ACAACGCACCTTCATGCTCCAAGAGCATGTAATCGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGTATTTGCGCCTTCGACCACAGAAACTGCTATATAAGCAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GAAGAACACAAAAACATATTAGAAAAATTAAAACGAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GGCAATGTTGATGTCCAACCAGACATAGTTTCTGGCGCT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGATAAGACTGACCGTTACGCGAGCCTTCATGATT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCAAGTATCATTGATCACCACCTTCATAAGAGCGATGAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGACATCCACGCCCGCAGGAAACGCCACCCGCGCCATCTCG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTTAATAAACGCGCATTGTCGACCAAGCGACTACGGCA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGAAGCCACTCTCGCGCAGGCGCGCGCGGCGGCGTATG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CTCCTCGCTGTTCGGGTCACGAAGCAATCGCCGCATCTTC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GCCAAGTTAGCCGCCGGTCTCGTATCGACCGCCCATTGTT
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TACAGCCTAATCAGGCTGTACGCGACGATCTCATAAG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCAAGGAAACTCACAATTGCTTAATCTTAGAAACA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	ATTGAAAATGCGCCGGCTGGCATCGTCACGGTGCTAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TAAGGGTGTACGCGGCGATTTCGTAGGTAAGCCAAACAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AACGGCGGACATATCCGCCGAAATTGAAGAGGCGATGAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TTGAGCGAGTTTTTCGGTGTGAAACGCTACCTCAGG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTAAATTATTACTGACGCAACAAAAGCATTGTTTACAAAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	AGAAAACCCCCGAATGACCAACCGAACCTGCACACCGTAC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GCGTTCTCGATGCCTTCGATGCTTTCGGGTGGTGTCTCGCTG
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	TCGTCTCGCGCCGCCTCCACTGCGCGCTCCGCGTCAATAATCGC
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	GTACAGGAACGCGTGTACGCTTATCCCGTGAACTCA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CGCAACCGCCGCGCGATATGCGACGCCTCGGTCCACGTAAA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGAAAC	CCCCGTGCGGGCTGCGAAATACATCGCCCGCGCTCGTTCGA
GTGGAAAAACCCCAAATCCCCGCCAGGGGATTGGCGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120499.1|2552107_2552740_+|orotate-phosphoribosyltransferase	unknown	unknown	gnl|CDD|234771
NC_009767.1|WP_012120502.1|2554643_2555816_+|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341473
NC_009767.1|WP_012120500.1|2552773_2553898_+|glycosyltransferase	unknown	unknown	gnl|CDD|340828
NC_009767.1|WP_012120497.1|2543681_2543963_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NC_009767.1|WP_157042609.1|2540189_2540333_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120490.1|2534513_2534996_+|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl|CDD|367635
NC_009767.1|WP_157042611.1|2550397_2551408_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041331922.1|2535014_2535848_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274212
NC_009767.1|WP_012120495.1|2541532_2542396_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl|CDD|273848
NC_009767.1|WP_041330577.1|2554332_2554539_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120507.1|2561675_2562182_-|HNH-endonuclease	Cas9_archaeal	cas9_archaeal	gnl|CDD|224321
NC_009767.1|WP_012120504.1|2557325_2558177_+|DUF2079-domain-containing-protein	unknown	unknown	gnl|CDD|370724
NC_009767.1|WP_157042610.1|2541093_2541246_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120493.1|2537002_2538433_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	COG1332_csm5gr7_CAS-III-A	gnl|CDD|187793
NC_009767.1|WP_012120494.1|2538726_2540193_+|hypothetical-protein	csx1	mkCas0109_csx1_CAS-III	gnl|CDD|187833
NC_009767.1|WP_157042813.1|2558278_2558686_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120496.1|2542651_2543671_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|376633
NC_009767.1|WP_012120506.1|2559647_2561591_+|PhoX-family-phosphatase	unknown	unknown	gnl|CDD|225752
NC_009767.1|WP_041330579.1|2555951_2557322_+|DUF2079-domain-containing-protein	unknown	unknown	gnl|CDD|370724
NC_009767.1|WP_012120492.1|2535860_2537003_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl|CDD|273866

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012120495.1|2541532_2542396_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	2.2e-23	77.9	0.0
NC_009767.1|WP_012120490.1|2534513_2534996_+|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	3e-43	141.8	0.0
NC_009767.1|WP_012120507.1|2561675_2562182_-|HNH-endonuclease	Cas9_archaeal	cas9_archaeal	5e-11	36.5	0.0
NC_009767.1|WP_012120493.1|2537002_2538433_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	COG1332_csm5gr7_CAS-III-A	1.3e-29	98.7	0.0
NC_009767.1|WP_012120497.1|2543681_2543963_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	6.1e-28	91.6	0.1
NC_009767.1|WP_012120494.1|2538726_2540193_+|hypothetical-protein	csx1	mkCas0109_csx1_CAS-III	1.1e-190	629.2	0.0
NC_009767.1|WP_012120492.1|2535860_2537003_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	8.1e-27	89.0	0.0
NC_009767.1|WP_041331922.1|2535014_2535848_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	2.4e-71	234.6	0.0
NC_009767.1|WP_012120496.1|2542651_2543671_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1.2e-101	334.6	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120499.1|2552107_2552740_+|orotate-phosphoribosyltransferase	gnl|CDD|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	1.67488e-53
NC_009767.1|WP_012120500.1|2552773_2553898_+|glycosyltransferase	gnl|CDD|340828	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.	2.14682e-35
NC_009767.1|WP_012120497.1|2543681_2543963_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.92512e-28
NC_009767.1|WP_012120490.1|2534513_2534996_+|type-III-A-CRISPR-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	5.27935e-32
NC_009767.1|WP_041331922.1|2535014_2535848_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl|CDD|274212	TIGR02582, CRISPR_type_III-associated_RAMP_protein_Csm3, CRISPR type III-A/MTUBE-associated RAMP protein Csm3. Members of this CRISPR-associated (cas) gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm3, for CRISPR/cas Subtype Mtube, protein 3.	9.65936e-86
NC_009767.1|WP_012120496.1|2542651_2543671_+|CRISPR-associated-endonuclease-Cas1	gnl|CDD|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.32617e-125
NC_009767.1|WP_012120495.1|2541532_2542396_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	5.87393e-13
NC_009767.1|WP_012120502.1|2554643_2555816_+|iron-containing-alcohol-dehydrogenase	gnl|CDD|341473	cd08194, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like. This family contains iron-containing alcohol dehydrogenase (Fe-ADH) most of which have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. It is distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.	0
NC_009767.1|WP_012120507.1|2561675_2562182_-|HNH-endonuclease	gnl|CDD|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	1.7352e-27
NC_009767.1|WP_012120493.1|2537002_2538433_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.81072e-16
NC_009767.1|WP_012120494.1|2538726_2540193_+|hypothetical-protein	gnl|CDD|187833	cd09702, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TIGR02710 family.	2.97681e-06
NC_009767.1|WP_012120504.1|2557325_2558177_+|DUF2079-domain-containing-protein	gnl|CDD|370724	pfam09852, DUF2079, Predicted membrane protein (DUF2079). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.99866e-16
NC_009767.1|WP_012120506.1|2559647_2561591_+|PhoX-family-phosphatase	gnl|CDD|225752	COG3211, PhoX, Predicted phosphatase [General function prediction only].	0
NC_009767.1|WP_041330579.1|2555951_2557322_+|DUF2079-domain-containing-protein	gnl|CDD|370724	pfam09852, DUF2079, Predicted membrane protein (DUF2079). This domain, found in various hypothetical prokaryotic proteins, has no known function.	3.03239e-32
NC_009767.1|WP_012120492.1|2535860_2537003_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl|CDD|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	8.27919e-26

Protein sequences

>NC_009767.1|WP_012120497.1|2543681_2543963_+|CRISPR-associated-endonuclease-Cas2
MLYVIAYDIPDDARRLKLANVLEGFGQRVQRSVFECDLTEREYRALIKKVERVVNLNEGDSVRIYRLCGACVANVDVRGEGPPVEKSVDIYIV
>NC_009767.1|WP_012120496.1|2542651_2543671_+|CRISPR-associated-endonuclease-Cas1
MDTLYVTEQGSEIGCDGERLAVRRDNAIIASIPLIKIEDIVIIGNVGLSTPAIKRMLDNGINVTFLTVHGRYQGRLVGSVSAHAALRAAQYRRADDRAWSLRLAQRFVEGKLRNCRALLRRFARNRADAPAEAGQAADDLDRFIDRVPRTTTLNALMGVEGSATARYFAGVRALIGAEWRFEARIRRPPPDRVNALLSFGYTLLVHKMLGAVEAAGFDPYLGYLHHIDYGRPSLALDLIEEFRPILVDSLVIRCCNDGRIAFDDFTETPDGDYPVLLSDDGKRRFVAAFEERMRTEATHPDGADGRPGKVSYLRCLALQARRLARAVQGGADYEPFAVR
>NC_009767.1|WP_012120495.1|2541532_2542396_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MPVSLIFTIRPLAAAEKPASLGRAAHAAILRLIGDSDPALATRLHDDDGPKPLTVSNVIGLEARQHMARVYPDRRYRLRVTLLTPALEAIAAAWRPAALAPLDLDGLLWRIEQITDNPGDDPWAGRAAYEELATALLARHATSARWTFEFATPVTFRQRGLNQPLPLPALTFGSLLERWNAFAPIALPDETRRFAEECIAVSRFELRSRSDPTKGGAPQIGAIGRVTYAAVNRDRYWLACIDALAHFTLFSGIGAGVARGYGQARLLDDDHTGARPHTTGQPDGLSA
>NC_009767.1|WP_157042610.1|2541093_2541246_+|hypothetical-protein
MPVSLIFTIRPLAAAEKPASLGLPVTIRHGQPEQREGSCATRLDSSLRSE
>NC_009767.1|WP_157042609.1|2540189_2540333_+|hypothetical-protein
MTHGHTVAFGRNRSDEAVADLRHTSQTPAPSSLGDRLASRRTRRSIG
>NC_009767.1|WP_012120494.1|2538726_2540193_+|hypothetical-protein
MHLLVLANIGNSDLIADSRRLQRPRADGEAAWQTFERHTFETPIIEPCVRWIIGRNGRIDRLILFYTDQPATPETLKPDRSGMSLRDKDTLWYARIIERLLRERFGDRIGHLECQAIRRIDGRNINPSIYDEAFDAYAGLVAPLVDAQTTCYVLMAGGIPACNTALQLNAISAFGDRCRVVYQPEGGQPYDLRVGDQVLNVFRRATAIDALERLDFATALPLVRQVADGAVAALVAYAHYRECFDFERAQTTLSHGIRQASGELRSFLANLEHDLDPLMLRSDIDALLRELVANATITFRNGRYADFLGRLFRFQEAALRFIIETKLGLPTDMSKERKATNLPEYRQRIDADPGLKAWLDARTIDGTPLRYDTPNIPTLQAMLDYLIDPASVKPDGAPYLPKDERGRLTGVKQRLDKITSLSQLRNQSVIAHGFAGVSRERLAEVYGGDPDALIADLREIVKLLGLSAQESPFEQIAGIAIEQLRHLT
>NC_009767.1|WP_012120493.1|2537002_2538433_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MALVRNQVVSLTVTTITPLHIGTGDRLAANLDYYVDGDATLVINADAALELVVETWQQRRVPYEEQLRRFNAELAQEEERIRRADERLRRQIEQFEESPPRRKDEYERQANRFREEAQRLKERKQRLAEHSANPPQPDDTGDLLPPELIAGSTFDQLVDGGLLPRDRLRERATVNGRPLVRYALNGRPASGEVYEQIKDVADRLYLPGSSLKGAIRSALAWDMAHSPAVAALQHAVKGGPKNADDAIEQEVFLGTLRTQRRINNTVRDVLRALRIGDSAPVAVAPDLLAVRIYRSRSAQGLIALEAIPVDVEFRAALQIEQYPFESGVARAVIDFGDWQRRLQPDELAAACRRRAGRLIDGELAYFNRQTDAAELVRFYADLRARLERMDARAFLLPIGWGAGWRSKTLDDRLRQGTDRDNAFAQIVQRHTLKKHKSAGFRPGDAFPETRKVIMRGALPWRPLGWVEARFDLNGER
>NC_009767.1|WP_012120492.1|2535860_2537003_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MNDLTVYALVPPPDRRTLCFHFGRQGIGLEETGETFPSDSLFAALVAQAATLDNADLDAEGIPAFARPFRNGNPPLFHSSLFPRLGDLPLLPRPALPLVTPDDDIRMRIGKRFKRLKYLSPALFADVCAGRPIADAPLMLQDGKVWITAAEARTLTVDPWRRQANESDEAWKRRLETTPIWSIVSEPYVTVDRVSCASAYYEVGRVTFAPGAGLALLVRFVDPAWRLRFEQLLDLLGHSGLGGRRASSGAFDWQPGKALDVTWGAAGGRAVLLSRYLPAQHEIAALRSDRAAYQLVNIGGWLFSPGHLPQRRQRVRMVAEGSVLDVRAANPRGQVVDVRPDYRKSKNPHPALGKNVGTPHPVYRSGLALTAPIPDWKEES
>NC_009767.1|WP_041331922.1|2535014_2535848_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MTERFVTLHGRIFLRADIELLTGLHIGGAAAGLEIGGLDKPVIRNPRTNEPYIPGSSLKGKLRSLMEKAHGAPQTFRVNEGVFVHAPESIAQYRQYQMIGGVFGVLPRWGPNGNRNAFTVPAPTRLAVRDVPLRAESREELKRLRTDLPFTEIKWEAAIDRVTSAAAPRQIERVPAGAVFGPAELVYSVYVGKEETPTGVAALFDTVIEALLHLEDDYLGGMGSRGNGQVRLKNLHISARRVRNGQYGDEMQFDSQPASLKELDRAALKTWLEKTFA
>NC_009767.1|WP_012120490.1|2534513_2534996_+|type-III-A-CRISPR-associated-protein-Csm2
MSNPRSEQRLTGDQLAQELAPQETLKRIITEDTTESIQALTATAERIGSRLARDVTTSQIRNIFGTVRAIEQDVKTIDDDRPLPLPVQRELQMLRPKLAYQYGRVQGRDDDPGKAAMGALTKILSDSIGLVGADTRRFRNFVDFFEAILAYHRRYGGRTN
>NC_009767.1|WP_157042611.1|2550397_2551408_+|hypothetical-protein
MLSVDDIRAVIQSVVGHDVGAIAALCHASSSVQAALTPDVLRALAHRVTSDPFSAARVLCDAPMSVWKALDAESIRMMAHAVASRYDCAIMVAMSTSSAIWKVLDDDAIRSLARGILPLCDDAMLGVSLMGSSVPALWTKLTAEEAHPFVQATARDMFLATEMLITAPDDFLTTLFADDLRALVMSSAQHSITAAHTLLGVRNAVWASLDGQTKDSLIHAALRDPGAFVDVLQTMSATPLLSWKPEIFLWLNDAAPERWTAVLPVLPDETLYEALMAMSNDVLQRRDTRDTLMTIARRDGADVIRRALRARARRLVPTSILPPSTEDKRTKGDRRG
>NC_009767.1|WP_012120499.1|2552107_2552740_+|orotate-phosphoribosyltransferase
MTTDIAYEIAATLLEAGALLIRPREPFIFASGLRSPIYCDNRMLLGDVAARRIVTRGFAAQCADAQVVAGPATGGIAWAAWVAEALSIPMAYVRSGAKGHGRGRQVEGATVRDRRVALLEDTVSTGESALQAADALRAEGALVTHCVCIFTWGWADTEARFAAAHLHLVPLATLPAVLDVAQRTGRLTPEARALVESWAANPRAWMPPEA
>NC_009767.1|WP_012120500.1|2552773_2553898_+|glycosyltransferase
MSRTSIVPTLSDHCSTPHLSVVWQSRWGIPIGYAVSSEALALALAARGVELSYRPTPWHMPGTIRYPALLAAAARAPRDDVPQVSYDQADLFYTRHAGYKIGYTMLEVDGLPREWVAACNAMDEVWTPSRWGATVFANAGVTRPIYVMPLGYDPVCFRPDGPARRIAERFTFLSVFEWGERKAPDILLRAYAASFTRRDDVALLLRVNNFDAEVDVARQIAALRLPADAPPIALLYNRYISDESLGALYRSADCFVLPTRGEGWGLPILEAMACGLPVIATDWSGQTEFFHGGVGYPVRVRRLVAADAKCPYYLGWRWAEPDIEHLIALMRHVYEHPNEARVVGARAAQEAATRWTWAHAAERIHRRLMDATDG
>NC_009767.1|WP_041330577.1|2554332_2554539_-|hypothetical-protein
MPHSLQTPSPFVRSFCGAALLNLLPCLIVCLRHRALRPGLGGVVRDMPRHPAPVGFYAQEQRSIERLS
>NC_009767.1|WP_012120502.1|2554643_2555816_+|iron-containing-alcohol-dehydrogenase
MMPPREFLMPAQVLIGSGAAEQVGAQCQKRGWKKALIVSDKIMLSLGLVGKVEQYLADSGIASAVYAGVNTEPVVEYVQEGLQVYKEGNCDFVVAVGGGSPIDTAKAIAVLVTNPGSIEQYKGIGKIGAPGVPVVAIPTTAGTGSEATVYTVITDQKTDVKMLIGSPYLMPTIAIVDPMLTVSSPQSVTAATGVDALVHAIEAYVSVKRQPMTDIFCLSAIRLIAQSIRQAWANGNNMEAREQMMLGAFQAGVAFSNSSVALVHGMSRPIGAHFHIAHGVSNAALLAVVTEFSLIGDPLRYAQIAEAMGEPVQGLSMMEAADRVVHAIRRLVSDIKIPSLRQLGVERERLIELAPSMADAAIDSGSPANNPRKPTRQEIIDLYVKAYDEA
>NC_009767.1|WP_041330579.1|2555951_2557322_+|DUF2079-domain-containing-protein
MKPIYDPIQVRRYVISGILIVATFFLTIAALLKESDAAYHSAILIDFYPVERNNSGEYRFTQPRSHIFIPPFVSDAVALSFRTYSPGPLPERTLTLRLDERTFVSLASGHSVRRLLLVLSPAGVGAGQLLTLETAPAEAPGDLRRLGVFTANIELQPLNPHIYQRFALVVLAPVTASLLLLVMRCGVLASACSAALVAGMVLWGWTIAWGATFGLGVILVFDRMLNCGRGMFWLRQSIDQLLSCLSLPDMVISTLILIWISTVGWSSLAIHERYATGAYDLGLFDQWLWLISRGLTPYSTGIGVHLLGDHAAVLLYPLATLYLFVPDVRALLLVQVLAVGMGGLALYRIGSTRGSSWMGALVAGAYLLHPSTHNMALFHFHPDALAAAALLIVLLGIERRNATMMAVAVVVCAAKENFALTTALLGAWLVIRGERRLGSALFFGSLAWFSIATFLI
>NC_009767.1|WP_012120504.1|2557325_2558177_+|DUF2079-domain-containing-protein
MFNGQSQSVFASRFDRYGATPGDILRSIFLRPDRVVLDLFHSENLHYLALVLAPLGMLPLLSPLHAALALPALTLNMLSNYDAQRSLLFHYDALPVALVSYACLDAAIMLRGWWKPRVAFVVCALCIICGACWTVAAVPLRIQDALFPAVRDVEWSYVRRYILTYIPRDAAVSVSPALHPHLMHRTQAFVFPNPFVRIHYVNPAGAPQPPSIDWIVHDYYGMGRATANRERELLSDLERRKLFVPVMRVGTITLMKRTDSSLPASCFGAGWQSVDCLSAYQNR
>NC_009767.1|WP_157042813.1|2558278_2558686_+|hypothetical-protein
MECGAKKPPLFLAISAADNEPLAAQIERAIHERRLAVVDLPLLTDVAQGDPYLAEQLAALHAQWEVRPQPSRGLLDRLRRRIAWWLLEPEIRQINAVHATLTRLIDSLIVLADRERAARRRIEEYQAHTSAEPLQ
>NC_009767.1|WP_012120506.1|2559647_2561591_+|PhoX-family-phosphatase
MGGRDEQDKLIVRSVEGKGKEFERILEERLSRRDFLKAAAVTSGLVVAATAMNADVAAAQTRPAPLPPKFGKVAPTTPEVDEIAVPDGYYAATLIRWGEPIFADAPEFDVWTQTKEKQEKQFGYNCDYVGYFPLPSYTSNNSTRGLLVVNHEYTNPELMFPGYDVENPNPTRTQVDVELAAHGVSVIEVARGRDGRWNVVRNSPYNRRLTGYTPMTVSGPAADHEWMKTNADPTGRNVLGTLNNCAGGKTPWGTVLTAEENFHQYFANLRAMPNSDYRKAIHNRYGMPSGASERRWENFHDRFDIAKEPNEGFRFGWIVEFDPYNPNSVPVKRTALGRFRHEAATIVIAPSGQVVAYSGDDARGEYVYKFVSNGRYNPRNRAANFNLLDDGTLYVARFNADGTGEWLPLKHGFGPLNEGNGFMSQGDVLIKTRNAADALGATKMDRPEDIETNPVNKKVYIILTNNSQRGVGNGPPVDAANPRANNRAGHIIELTEEGNNHAATRFTWNIFILAGLPTDESTYFAGYDKSKVSPIGAPDNIVFDLAGNAWVATDGAASAIKLNDGLFAIPVAGSERGHVQQFFSSVAGSEVCGPEFTPDNRTLFLAIQHPGEGGTFDKPISTWPDRQGLARPSVITIQAFDNRRIGR
>NC_009767.1|WP_012120507.1|2561675_2562182_-|HNH-endonuclease
MGQRVLVLNASYEPLQFISVRRAIVLLLQDKAELVEAAEQRLRARGISLEVPLVIRLVRYIRIPRRMRLPCSRRSILMRDRETCQYCGAQPGRAHLTVDHVVPRSRGGETTWENVVTACRDCNHRKGGRTPEEAGMTLLTIPRQPQYVAFALLGELERHDVWRKYAYV

Crispr_ID: NC_009767_50

• CRISPR_ID: NC_009767_50
• CRISPR_location: 2724473-2724574
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_50

Consensus_repeat	Method
TCCTTGCCTCCCACGTGGATTCGGG	CRISPRCasFinder

spacers of NC_009767_50

>50.1|2724498|52|NC_009767|CRISPRCasFinder
CGTCGTTGTGACGCGGGTGTCATCCGCGAGGTCGCTAATGGGGCGATGTCTG

CRISPR arrays and Neighbor proteins around NC_009767_50

CRISPR arrays

The CRISPR arrays of NC_009767_50

>merge|NC_009767|50|2724473-2724574|CRISPRCasFinder
TCCTTGCCTCCCACGTGGATTCGGGCGTCGTTGTGACGCGGGTGTCATCCGCGAGGTCGCTAATGGGGCGATGTCTGTCCTTGCCTCCCACGTGGATACGGG

>NC_009767|50|43|2724473-2724574|CRISPRCasFinder
TCCTTGCCTCCCACGTGGATTCGGG	CGTCGTTGTGACGCGGGTGTCATCCGCGAGGTCGCTAATGGGGCGATGTCTG
TCCTTGCCTCCCACGTGGATACGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120626.1|2720148_2721390_-|mandelate-racemase	unknown	unknown	gnl|CDD|239440
NC_009767.1|WP_157042819.1|2721414_2722194_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|212491
NC_009767.1|WP_012120623.1|2716337_2717852_-|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224053
NC_009767.1|WP_012120639.1|2739151_2740018_+|CHAP-domain-containing-protein	unknown	unknown	gnl|CDD|236304
NC_009767.1|WP_012120636.1|2734165_2735203_+|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009767.1|WP_012120629.1|2723331_2724054_-|GntR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224715
NC_009767.1|WP_012120621.1|2713990_2715121_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224094
NC_009767.1|WP_012120635.1|2732929_2734156_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|274577
NC_009767.1|WP_157042623.1|2727432_2732088_+|cell-division-protein-FtsK	unknown	unknown	gnl|CDD|274860
NC_009767.1|WP_012120637.1|2735433_2737509_+|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl|CDD|223704
NC_009767.1|WP_012120632.1|2727033_2727315_+|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl|CDD|274862
NC_009767.1|WP_012120630.1|2725042_2726044_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|198111
NC_009767.1|WP_012120624.1|2717915_2719010_-|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|379168
NC_009767.1|WP_012120631.1|2726261_2726963_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|238017
NC_009767.1|WP_012120634.1|2732084_2732933_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|366133
NC_009767.1|WP_012120620.1|2712984_2713971_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NC_009767.1|WP_012120628.1|2722186_2723335_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270453
NC_009767.1|WP_012120638.1|2737628_2739041_+|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NC_009767.1|WP_012120625.1|2719086_2720109_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|119321
NC_009767.1|WP_012120622.1|2715190_2716186_+|DUF3048-domain-containing-protein	unknown	unknown	gnl|CDD|378618

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120626.1|2720148_2721390_-|mandelate-racemase	gnl|CDD|239440	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA. rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	8.66481e-148
NC_009767.1|WP_157042819.1|2721414_2722194_-|SDR-family-oxidoreductase	gnl|CDD|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.57546e-67
NC_009767.1|WP_012120623.1|2716337_2717852_-|sugar-ABC-transporter-ATP-binding-protein	gnl|CDD|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NC_009767.1|WP_012120639.1|2739151_2740018_+|CHAP-domain-containing-protein	gnl|CDD|236304	PRK08581, PRK08581, amidase domain-containing protein.	2.72139e-11
NC_009767.1|WP_012120636.1|2734165_2735203_+|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.76249e-56
NC_009767.1|WP_012120629.1|2723331_2724054_-|GntR-family-transcriptional-regulator	gnl|CDD|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.58801e-41
NC_009767.1|WP_012120621.1|2713990_2715121_+|ABC-transporter-permease	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	9.2616e-76
NC_009767.1|WP_012120635.1|2732929_2734156_+|VWA-domain-containing-protein	gnl|CDD|274577	TIGR03436, acidobact_VWFA, VWFA-related Acidobacterial domain. Members of this family are bacterial domains that include a region related to the von Willebrand factor type A (VWFA) domain (pfam00092). These domains are restricted to, and have undergone a large paralogous family expansion in, the Acidobacteria, including Solibacter usitatus and Acidobacterium capsulatum ATCC 51196.	4.60826e-10
NC_009767.1|WP_157042623.1|2727432_2732088_+|cell-division-protein-FtsK	gnl|CDD|274860	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain. This model describes the C-terminal domain, or longer subunit, of the Firmicutes type VII secretion protein EssC. This protein (homologous to EccC in Actinobacteria) and the WXG100 target proteins are the only homologous parts of type VII secretion between Firmicutes and Actinobacteria. [Protein fate, Protein and peptide secretion and trafficking].	5.39383e-110
NC_009767.1|WP_012120637.1|2735433_2737509_+|SpoIIE-family-protein-phosphatase	gnl|CDD|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	6.24821e-54
NC_009767.1|WP_012120632.1|2727033_2727315_+|WXG100-family-type-VII-secretion-target	gnl|CDD|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	2.9997e-20
NC_009767.1|WP_012120630.1|2725042_2726044_+|helix-turn-helix-domain-containing-protein	gnl|CDD|198111	smart01043, BTAD, Bacterial transcriptional activator domain. Found in the DNRI/REDD/AFSR family of regulators. This region of AFSR along with the C terminal region is capable of independently directing actinorhodin production. This family contains TPR repeats.	6.0403e-15
NC_009767.1|WP_012120624.1|2717915_2719010_-|sugar-ABC-transporter-substrate-binding-protein	gnl|CDD|379168	pfam13407, Peripla_BP_4, Periplasmic binding protein domain. This domain is found in a variety of bacterial periplasmic binding proteins.	2.37333e-42
NC_009767.1|WP_012120631.1|2726261_2726963_+|FHA-domain-containing-protein	gnl|CDD|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	0.00108365
NC_009767.1|WP_012120634.1|2732084_2732933_+|FHA-domain-containing-protein	gnl|CDD|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	1.45263e-15
NC_009767.1|WP_012120620.1|2712984_2713971_+|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.63964e-94
NC_009767.1|WP_012120628.1|2722186_2723335_-|extracellular-solute-binding-protein	gnl|CDD|270453	cd14750, PBP2_TMBP, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose; possesses type 2 periplasmic binding fold. This group represents the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.55254e-55
NC_009767.1|WP_012120638.1|2737628_2739041_+|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	5.82936e-06
NC_009767.1|WP_012120625.1|2719086_2720109_-|ABC-transporter-permease	gnl|CDD|119321	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group also contains E. coli RbsC, AlsC, and MglC, which are TMs of other monosaccharide transporters, the ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also be involved in low affinity ribose transport. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Proteins in this subgroup have a single TM which homodimerizes to generate the transmembrane pore.	3.72505e-78
NC_009767.1|WP_012120622.1|2715190_2716186_+|DUF3048-domain-containing-protein	gnl|CDD|378618	pfam11258, DUF3048, Protein of unknown function (DUF3048) N-terminal domain. Some members in this bacterial family of proteins are annotated as YerB. However currently no function is known. This entry represents the N-terminal domain.	8.54645e-56

Protein sequences

>NC_009767.1|WP_012120629.1|2723331_2724054_-|GntR-family-transcriptional-regulator
MTDHKTVLADTVYESLKARIMEQVYAPCERLNIDALALELSVSPTPVREALARLAAERLVTFEAFKGYRVSALLTKTQIAQLMHARRLIEIDAARLAATSMLVADLIAVERLLQRILDESAHIEVRSWSQGYRQFNQLDQQFHETIVSAAGNEFLFNAYRSLNVHVELGRFYRVFGTIEQTQTCKEHAAIVQALRSRQPDRAAAAVERHLHATEERIFRLIENSASSSNPLRSANIRGEQ
>NC_009767.1|WP_012120628.1|2722186_2723335_-|extracellular-solute-binding-protein
MTVRVALIGGPMYNALYTRLDQFSQQSGVQVEVAFVGDHPALNTFLATDAAADCHVVSTHTKYAPSQQRLLAPLDELLTPAEWSDFMPSLLELARIDGRLYGIPRNIDVRLLHYRTDLIDQPPTTWDELLDLARRVNHPPEWYGFLFPGTESGLFGTFYELVESANARLFSPDLTPNIENDGGRWALGFLRTCYAEGLVPPEIVTWHYDEVHLWFRAGRAAMVGDWPGYYADYCATDSQVRERFALALYPAGPSGGVRVYGGSHTFALTHRGVEQTDAVALLRFLTAPEQQLLEAKQGSTPVRHSVMQRIEQHATPHERQRWATLAAAIERVVIPPKFERYPLVEQALWTTVQQAMVGAIAIDEALHRLTDRITRIVAGNDG
>NC_009767.1|WP_157042819.1|2721414_2722194_-|SDR-family-oxidoreductase
MGELAEKVIFLTGGAQGIGRACAIAYARAGGSVVIADINLDLAKATLERDLQGNGLAIQCDVASSESVRAAIEQTLAHYGKIDAIHNNAAISRPSAPLHETSEEQWDALMATNLKSVYYTTFYGIDALKASRGCILNTASMVGVLGQERHAAYVATKGAMIALTKAMALDYASYGIRVNAICPAAVWTPLLHEWVQDQPDPAAARQFLDGIHVLGYCPDGDVVADAAVFLLSERARFITGVALPVSGGAELGYRRIAAG
>NC_009767.1|WP_012120626.1|2720148_2721390_-|mandelate-racemase
MRSTVITAVHARDVRFPLKPGEGVDAIHTNPQYAYAVTLLATNTSLRGTGLAFTLGAGTELVCDAIRMLAQPLEGREIEELMADFGRLTRQIADHPQMRWLGPHKGVVHLALASLTNACFDLWAKARGVPLWKLLLDLTPEAIMALLDLSYLEDVLTPSEAINMLYREMTHRNERAAILTQGYPGYDTSVGWFHYDDRQLIENARRAADAGFSAMKLKVGSPDPAHDIRRALLVRETVGRDVRIMLDANQQWTLPMALHACQELASMQPYWIEEPTHPDDVIGHQTLARSIAPLRLAVGEHLPNRVVFKNYMQANAAHFIQADCTRVGGVSEFITVSLLARRFNLPVAPHVGDMGQIHQHLTLFNRIALGHETVFLEYIPHLRDRFRYPAQVEDGVYRTPQEPGSSADLIDCT
>NC_009767.1|WP_012120625.1|2719086_2720109_-|ABC-transporter-permease
MSNSQADSKAQRRGAWNSVGSSVFSAFRRSDASVVLAVLFLFALFSLSNPSFLTSFNLFNISRTAALFVFIALGQAIVIVAGGMNLSLGAIGGLTVVVAGWCMDTMGWSPWVGVSLALLTGMLCGMFNGFIVVKMRLNSFVVTLASLFIFTGLIQGISQGFPYSNIPKEFTILGRGDFIGIPYLLLLALVVLMVMEYVFKFRIVGRHLLATGGNPEAARLSGIRTDRVIFLSHTLSGLFAAIAGLLWVSRMGSAQPSTGADWLIISFAVAIIGGTALNGGAFSALGILASALLLTLIRNGLIMLNVNVYFEQTFLGLIVLLAVSIESIRQALNKHTNRSP
>NC_009767.1|WP_012120624.1|2717915_2719010_-|sugar-ABC-transporter-substrate-binding-protein
MTKQCRNTLSRHITGLMALAFILAACGDPAATAPTPASIQTEATGAPPTVVPPTTGAFKPVWYAPAPHPYFEEVRKGVTAFEADTGIKVEQQIGPDWTQGSQNQRIEALAAQGFNAFAVYPADASGANGLYEELTTAGAHIINFGTSTAQPTTASFAVATDVKAAAMQATEELIKAMGGKGNIINVLEVLEDPNTALRKQGIEEVVARYPDVTIIQEVAGMTSIETAVQKISDALSANVDRVDGIIATGYTPSVAIAQVLTEYRARGGQRQIHAVGIDTDEAVMKAIADGVMDGTIVQNPFGHGYLSLLLLKYLSEGYKPKADAYFVNAGFIFVTKENLDTYQQDILKVTEQIKSEMLDKYLER
>NC_009767.1|WP_012120623.1|2716337_2717852_-|sugar-ABC-transporter-ATP-binding-protein
MLQVHRITKTFPGVRALSDVSIDFAPGKIHALVGENGAGKSTLIKIIGGIYSPDSGKIILDGMTLHLRSSKDALVHHINLVSQEIQVIPRSTVAENIMLDKLDRYQRRGHIDWTRLKRDAAEYAQMVNLTIPVTQTVADLSVAHKQLIMIARALSANARVLIMDEPTSTLTPHESDNLLTLLRRLKNNGVIVIFVSHKLEEVLAIADTVSVLRDGVLIGTQPATGLTRGQIIHMMIGRDVRALELTPLPVNATDVVLEARNICQRGRFHNISFTLRRGEILGFYGMVGSGRTELAHILIGEQRMDSGHVLIHGKPARIRTMADSLFTYRMGYISENRKEQGLILSASIKTNIAITIWHNLRDRLGSIRPAAETAIAREFMQNLDIHALDPDQSVSLLSGGNQQKVSIAKWLAAQCNILIIDEPTIGVDIGAKEYIHRLIWRLAAHEGKSIILISSDLPEITALARRILVFRNFRIVGEICNNGENNAPVRGYDDISQEIAHLLT
>NC_009767.1|WP_012120622.1|2715190_2716186_+|DUF3048-domain-containing-protein
MRTFPLLRPATGLLALAILVAFVTPVAAAPPRAPAAFERGTITRRPYVVMIDNHPNAYPQTGLDKAAVVFEALAEAGITRFMAVYVPGVSPDVPAIGPVRSARLYFVRWAMGMRGMYIHAGGAPDALRRAREAQEIIDVDALMRSGGAYFSRVRARKAPHNLYTSTARLDQAAARFGNAEINDPDLGFPIKAEAPPEQRPAAQEIGYYFMYRQDSVGWTYDPAGNAYLRLRRGKPAVDAATGQQLRASNIVVIEVQERPIPGDPKGRIQQDVVGSGPGFLFQDGLAREITWRKESEAAPLRFYLADGSEAAMNPGQVWIAAVPKLSNLTVK
>NC_009767.1|WP_012120621.1|2713990_2715121_+|ABC-transporter-permease
MATVAKEAQSQTGRPRTFDDVGQLSQYQLIWRRYKKNRLSVVGAIALIIMYAMALFADVIAPYDPNEIDANHQYAQPSTIVWANGGLALQGMRQVVDSVNFQIIYEPDPDVTYPIRLFVRGSPYIMWGFIPLDIHLFGVDAPPEANAKIFLWGADRQGRDLFSRVLKGAQISLTIGFFGVMISMVIGSIVGTASGYFGGWIDNVIQRVIELIQTFPFISLFIAIAAALPITMPVVQRYMLITMILALITWTGFSREVRGKVLSYRNADYTAAAIAAGASHWRVITTHMIPNAMSHIIVVASFAVPGAIAAETALSFLNLGMLPPAVSWGVLLQDAQQIKSVTLYPWLLIPLGAIVLASLCLYLLGDGLRDAVDPYA
>NC_009767.1|WP_012120620.1|2712984_2713971_+|ABC-transporter-permease
MTTFLARRIVYMIITMILASFIGFFLIELPPGSIVDIKIDQLRAQGGNVPQDQIEALKRRYGVDDPLHIKYWKWVSRTLQGDFGTSFETDTPVAGIIAQRLPITFALTFGTALFAWLISIPLGVYLATNRGSIPDYIITFVQFLGIAIPNFALALILMVFAALVLRQDVGLGFFSPQYIGAPWSFAKFLNLLSNLWIPVVVLGASATAGLTRVMRANLLDVLNAQYIQTARAKGLQENAVIWKHAVRNAVHPLVMSIGYLLPAIVVGDALAGVILNLPTLGALYLRALQATDMYLGITILMMQCMMLLLGNLIADLLLAWVDPRVRLE
>NC_009767.1|WP_012120630.1|2725042_2726044_+|helix-turn-helix-domain-containing-protein
MRHDLLDLCLPLLLYADEMVQRQATLILMTTFGTHAFTLLRRRLGASDPDACREATEALRVLERHSGHPAAYRPFRGIHIECLGTFHVYVGNQEILPHHWAQANGSRAGSRKVQAVLAYLVHRGRHGATSEEILAAVWDSTGSAGALARTITALRRTIEQFGGSELAERALVYADGRYILKPTAYTSDVQAFEQAIHVAEQTESERDLATAAPIYRHACALYNGNYMAMIKMAADDIEERRVELLNAFLNAIERQAEHEYQNGNDDRCLALCRQGLRFDPSDSAITLWKLRCLARQRRINEVKREYWRYLRSLGVPPDAEDPVVLWMNAHSSR
>NC_009767.1|WP_012120631.1|2726261_2726963_+|FHA-domain-containing-protein
MEYEFEVCWGPSQCKTVVRAPYQTISEVIETLVVQLNLPRYDAREQRIEYGLYRDREEKRERIQDTQTLAQARIRAGRVYIANVTAPWWQTKATETPPQKSGTDRLPRRKLPVTPSRSYVCRLQLAPNCVVVVQGDYLELNRNYLSEKLPSAMVLAEKARVFSGYNSRLMHVSRTRHCDLFRQHEQWYIRAHKPTYVNGQVLNHGQTSVIQPPGTTIVLGQGGWSVTVELIEQ
>NC_009767.1|WP_012120632.1|2727033_2727315_+|WXG100-family-type-VII-secretion-target
MAPISLDPEQARSTASTFDGCKGTIEGELSRMMGSVNEVLATWSGQSRQQFEAEWDQWTNRLRNMMEELQGLANGLRREADEFESVDRSFVSA
>NC_009767.1|WP_157042623.1|2727432_2732088_+|cell-division-protein-FtsK
MLAPSDMRASKDDTGGPETFNRPPRILRILPTDEIEIPAPPAPPPLALSASLGFILIPAVTGVFYLIALVARGGQGGSVWFSLPIIIISFVSVGFGVWNYITQRRVQERARLEYANAYAETLAQVRAHLRRLDDDQRRVREENDPDPAALMDIAGGRGADALPEARLWERRPHDDDFLRLRVGRGDLPTSIAIKPPRANQFQYSPELRQALDLAREFSIVRNVPVTLPLRERGSMGIAGSDERVISFVYALVWQIVVHHAPNEVRLAAFWSIRFDSFWSWLRWLPHTRAFDDESYRLLARYDGDPEHLIQVRESLQRELRQRSEYGAANRPHVVVILDSYPDFGARDDMFGDLIVRGRDLKFSVLCLVNDARQTPGDCDGYIELASRSTLAFAGVGGGYQKFIPDTVSRDDSDRLARRLATVTQVMLDARRELPRSVRFSTILGLGELKSYKPDSWWCDPENPSDSWHPAPVGMTGPDVHQDRLLINLNEGFHGVHGIVAGTTGSGKSEFLLTFLMSLAVLHSPDRLNLMLIDFKGGATFKDLENLPHTVGMVTDLEGYQAERALLAINSELDRRKNRLQRVGAANIREYRRKQRSEPSLEHIPNLMIVIDEFDELVRDYPDFVNELIRVAKQGRSLGVHLLFATQQPSQVKEGLLRNLTYWIALRVTSPDDSKTMVSIPDAAYLTTETPGRGYFRVNKQVVAFQSARVTIPYQPFEQGESYGEVDITGRRRVISAQDLGIERFVDSVASICDHYHHDANALHAMVVKVLDQYEQALQRRELPQPVSDDRRTFQSIIDNALRRYLEVCQHADVSPTDEGRAIIRTMVAQLQGKHEVDTELALIAQAMEQARSPQYAASKYRVWTMPLPADIPLVTLLDQAPADHWMKAPVGLLDYPTRAEQRPLVLDLIGEHGNVLVVGAPRSGKTVLLRTLMLALAINHSPKDLWIYTIDSNGRGCGMALSTEPADDPRDRVLPHLADRLTPQDSARIERLLVELDAAIEDRRRLFREYGADTLHDYRQRHSRNPSLPSPPPVILVVIDTIADLVDAQPESTIESFLAIIREARSYGIAFVATAGTAKEVSRWQGLFETRIVLRVSDENDSDALLGKKVAFRIRADQPGRAFLRTSNGPVELHIAFPALRDTQQYARGRQPDDMMRYTNLEEQQLAHAIKIAARRYRALSSFSLPHPLRLLPERIELKELLDETTPPAIPFARDNLTLRPVLLDFDGGMNHLLIAGGPDSGKSEALRAILCALALRSTPDQTRFVLVDYRRKTLDIFAKSPFAGEYPVKIPDHPVPAPTSFANAKGEQRAVTLVTTEAELAGLCMALLDDLQKRVKDGVAEPRLVLVVNDLDLMIGREPEYLASLASYAMRGSDIGFHVILAATDFSSLQNNQLVKAIRTERCGLYLGKPVEAGSDTPNIAGVGVKWTKTLAKAQFPPGRGLALVRGQQMLVQVALATSDLLNTLVCPPQNVAADDHSAMSGTADSREFVDGAAITDLCAVPECIDGDHPLRGEVGQLPDLQTVTAFSNGASAAIQSSDGNQESDNRREL
>NC_009767.1|WP_012120634.1|2732084_2732933_+|FHA-domain-containing-protein
MTEYELWRYLEQYAQMSNAWWYSVAVLPATIISACAYFLMWLALRRTRQLPKMFLWLCVASLPTILVAPSFYVSTNLTDALARVGFGMPASEQQISRTVALQIGAYLSQVATLGIVGASLAFVTLIAAILVGGYAPPQVIQSIQSISQSFSKAMTRAFGPSREARVANSKYGVLTVTRGGAQQGAKFSVINSAIIGKVEAHIVVTDPVVSRKHARLEVKNDTVFLVDLGSTNGTFVKRSGREFELNGDPFELRHGDYIYLGVPSEPESVELIYERSPAGGQS
>NC_009767.1|WP_012120635.1|2732929_2734156_+|VWA-domain-containing-protein
MRRLFALCAILGMLTLLTPSAYAQSQGCRGIEVHAAQMEFPNVVVQFSVCDAAGNRIAGIDRSAIRLTEDGRPVADFDMESIVADAQTPVQSVALSNGGASFMLTTTGASIGIVFDATQLLNGSGAQARNSIGEGRAAIEAFLLEEGEPPPPRTRSPGNIEHIGLFIPVDQPDQSLQPETLPAFTQDRYAVINTLRQSLPIRQKKTSLNAAIQSAIEATARDAQQRGAEAAVLVVSDGGDALTGDTFTALIAQAQQRRVRIVAFGFGTDKALQSNGFRLKQLAEATGGIYLERPNARAAGDAFLRVAEPRPAALYRVRYSTQIIDDGKPHSLELEVNAPDRLIYQFPLTYAGADSGIRLTPLGDALLRQYFVFAVPIALFLSLFLTLISGAMFWLSTSSSGLKGKTQR
>NC_009767.1|WP_012120636.1|2734165_2735203_+|serine/threonine-protein-kinase
MPELPVPSKLGRFEVIELIGVGLTGEVYQARDRNGAMVALKVLARSKQRDPTVFGYFTNEQTLLREMTHHRRHPHIVEYVADNLVQPPYYLATRLVEGARGLDAIIGDRMPLPVGKGAPQPAAFVVRVISQIASALDYLHSGHPTYSPIIHRDVKPSNILIDASGNAVLIDFSIASHPHYALINEKTLGTPGYMAPEQYTGEEVPASDQFALALVALHMLTGRRPLPDKATAALRQIERWRDTRYDDITQMLDHRIHTADVLIRALAHNPAHRYESCEAFADRLRRALAQDGEDVRDAARIHPVPEMPSQPARLSIPYSWIGISVVMLIALIVLIVAALSPATGA
>NC_009767.1|WP_012120637.1|2735433_2737509_+|SpoIIE-family-protein-phosphatase
MSTSTASFDIDARTDRGRQRSNNQDSIGRADQWTTDRHQPIDRALRERYGRLYIVADGVGGNADGADASRMVVDEVMRVFYFDPAGVLPEEPVERLRAAIEHANNRVHAEAQRRRNNMASTIVAALIHNDTLTIANVGDSPAFLCRNGQSPQRLTKAHIRREADGSTALAQAMGDPRVYPAVFSLPLQQGDAVVLCSDGLTDLVQPTEIAEIVNGKTASAATRALIALANRRGGHDNISAIVVRNAPPPVSSVSPHMSKRLRLLIISLPVAILLAVFVIALPFLNPLPDTGGGAVRPTAAAQNLVIPGSHNNPSDLAQLPTVTLGALPTATDTPTPAPTRQARPTMRPTLISATPVTTTVVTEVSSADNPSPTQTPELKMPNVIGKSRSDAEQIIKDVLKVAPVIEEVRDDSATPSDHVVATEPRPGEPVRSGVPIKLRIKSRSSSAPPDHNPAPNNPPSAPDKPPSPPDNPPAPSATPTPGLSAPAPSLTPTKSPGPSATPTTPSPGPSPDNSGGSGGTGGTGGSGGTGGSDGGSGGTGGGSGGTGGSGGTGGSGGTGGSGGTGGSDGGSGGTGGSGGTGGSGGSGGTGGSGGTGGSDGGSGGTGGSDGGSGGSGGSGGSGGSGGSGGTGGTGGSGGSGGSDGGSGGTGGSDGGSGGTGGSDGGSGGTGGGSGGTGGTGGSGGTGGGSGN
>NC_009767.1|WP_012120638.1|2737628_2739041_+|hypothetical-protein
MAQQSYTLHLEAGRSMPVELSTDEPIYRLIDRLVQEHRLPSTDQHGRRVQYALYADHTRRLSREMSLRQAGYDQGGNLYLANVDAPWWEQTPALTRRLSHQSETKQDNRLRLYALLGGVFVVLTIGIVATLILFSVRRSPQVAQQPTLTVKSDMLVERSPTSTLAPLPMSAATAATATDGLPATATLAPLPTTAATATLASLPTAAATAATARDGLPATATLAPLPTAAATAASAPPSTLTVAALPTTAASPAQPFAVFPTATLVNLDADAVTVVGVKREYLDRGKRLFFQGRTSFGAYLWNEPELRTRLPASQGNVVISNGDRVAILSQENGAVHVRILTNALDPADPKVIGATGYLPRWLVFDEGVPPPAPTATPNPGKLFVYKLNEDDQPGCISMRIVRTNASGWSFVVDGTNLRGRFDNAGNARLCGLGADQEVTISVLDRNGRIIPGGRSVPSKGRAIMIGEWRQ
>NC_009767.1|WP_012120639.1|2739151_2740018_+|CHAP-domain-containing-protein
MARIGADLEQLRATIASLRQGNANLQETFQRTRQAMQALQSSPWAGRHRQQAEAVWERIQAQFTPAINALENLTARTEQFAHNLEAAGSRFNDGAAISSKAPTAPGVDTMPKSPLPPGDGAINGQQPPPYRPFESGPTTVPGVLQDTAGCTNYVLRRVNLDDMKRWPNAHEWNEAARNAGYVISDVPEVGSKGAIMVFEAGLLKGAYSSDGHVAYVEQVERDPDGTLRVTISEAKPVENNGEIVWGTHTPPTTRTIALRVGEDGKVASIDGNPISPNDVSFILGRRAM

Crispr_ID: NC_009767_51

• CRISPR_ID: NC_009767_51
• CRISPR_location: 2740110-2740223
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_51

Consensus_repeat	Method
GCCTTATACCAATTACCTGTGAACACCCGGCATGGTCAC	CRISPRCasFinder

spacers of NC_009767_51

>51.1|2740149|36|NC_009767|CRISPRCasFinder
TGTAGCGATTGAGGCTCCATACCTCCATTACGCTGC

CRISPR arrays and Neighbor proteins around NC_009767_51

CRISPR arrays

The CRISPR arrays of NC_009767_51

>merge|NC_009767|51|2740110-2740223|CRISPRCasFinder
GCCTTATACCAATTACCTGTGAACACCCGGCATGGTCACTGTAGCGATTGAGGCTCCATACCTCCATTACGCTGCGCCTTATACCAATGACCTGTGAACACCCGGCATGGTCAC

>NC_009767|51|44|2740110-2740223|CRISPRCasFinder
GCCTTATACCAATTACCTGTGAACACCCGGCATGGTCAC	TGTAGCGATTGAGGCTCCATACCTCCATTACGCTGC
GCCTTATACCAATGACCTGTGAACACCCGGCATGGTCAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120642.1|2742915_2744046_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120635.1|2732929_2734156_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|274577
NC_009767.1|WP_012120643.1|2744051_2744921_+|DNA-adenine-methylase	unknown	unknown	gnl|CDD|223415
NC_009767.1|WP_012120639.1|2739151_2740018_+|CHAP-domain-containing-protein	unknown	unknown	gnl|CDD|236304
NC_009767.1|WP_012120636.1|2734165_2735203_+|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009767.1|WP_012120641.1|2741681_2742518_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120647.1|2748546_2749983_-|cysteine--tRNA-ligase	unknown	unknown	gnl|CDD|234705
NC_009767.1|WP_157042623.1|2727432_2732088_+|cell-division-protein-FtsK	unknown	unknown	gnl|CDD|274860
NC_009767.1|WP_012120648.1|2749988_2750768_-|serine-O-acetyltransferase	unknown	unknown	gnl|CDD|200082
NC_009767.1|WP_041330615.1|2750947_2751202_-|FmdB-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225210
NC_009767.1|WP_012120632.1|2727033_2727315_+|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl|CDD|274862
NC_009767.1|WP_012120650.1|2751332_2752553_-|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|225755
NC_009767.1|WP_012120630.1|2725042_2726044_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|198111
NC_009767.1|WP_012120631.1|2726261_2726963_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|238017
NC_009767.1|WP_012120634.1|2732084_2732933_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|366133
NC_009767.1|WP_012120646.1|2747563_2748577_-|methyltransferase	unknown	unknown	gnl|CDD|283886
NC_009767.1|WP_012120638.1|2737628_2739041_+|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NC_009767.1|WP_012120637.1|2735433_2737509_+|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl|CDD|223704
NC_009767.1|WP_012120644.1|2745005_2746343_-|S41-family-peptidase	unknown	unknown	gnl|CDD|223864
NC_009767.1|WP_012120645.1|2746786_2747560_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl|CDD|236959

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120635.1|2732929_2734156_+|VWA-domain-containing-protein	gnl|CDD|274577	TIGR03436, acidobact_VWFA, VWFA-related Acidobacterial domain. Members of this family are bacterial domains that include a region related to the von Willebrand factor type A (VWFA) domain (pfam00092). These domains are restricted to, and have undergone a large paralogous family expansion in, the Acidobacteria, including Solibacter usitatus and Acidobacterium capsulatum ATCC 51196.	4.60826e-10
NC_009767.1|WP_012120637.1|2735433_2737509_+|SpoIIE-family-protein-phosphatase	gnl|CDD|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	6.24821e-54
NC_009767.1|WP_012120639.1|2739151_2740018_+|CHAP-domain-containing-protein	gnl|CDD|236304	PRK08581, PRK08581, amidase domain-containing protein.	2.72139e-11
NC_009767.1|WP_012120636.1|2734165_2735203_+|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.76249e-56
NC_009767.1|WP_012120647.1|2748546_2749983_-|cysteine--tRNA-ligase	gnl|CDD|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NC_009767.1|WP_157042623.1|2727432_2732088_+|cell-division-protein-FtsK	gnl|CDD|274860	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain. This model describes the C-terminal domain, or longer subunit, of the Firmicutes type VII secretion protein EssC. This protein (homologous to EccC in Actinobacteria) and the WXG100 target proteins are the only homologous parts of type VII secretion between Firmicutes and Actinobacteria. [Protein fate, Protein and peptide secretion and trafficking].	5.39383e-110
NC_009767.1|WP_012120648.1|2749988_2750768_-|serine-O-acetyltransferase	gnl|CDD|200082	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase. Cysteine biosynthesis [Amino acid biosynthesis, Serine family].	5.47723e-88
NC_009767.1|WP_041330615.1|2750947_2751202_-|FmdB-family-transcriptional-regulator	gnl|CDD|225210	COG2331, COG2331, Uncharacterized protein conserved in bacteria [Function unknown].	2.33862e-20
NC_009767.1|WP_012120632.1|2727033_2727315_+|WXG100-family-type-VII-secretion-target	gnl|CDD|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	2.9997e-20
NC_009767.1|WP_012120650.1|2751332_2752553_-|winged-helix-turn-helix-domain-containing-protein	gnl|CDD|225755	COG3214, COG3214, Uncharacterized protein conserved in bacteria [Function unknown].	2.565e-105
NC_009767.1|WP_012120630.1|2725042_2726044_+|helix-turn-helix-domain-containing-protein	gnl|CDD|198111	smart01043, BTAD, Bacterial transcriptional activator domain. Found in the DNRI/REDD/AFSR family of regulators. This region of AFSR along with the C terminal region is capable of independently directing actinorhodin production. This family contains TPR repeats.	6.0403e-15
NC_009767.1|WP_012120631.1|2726261_2726963_+|FHA-domain-containing-protein	gnl|CDD|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	0.00108365
NC_009767.1|WP_012120634.1|2732084_2732933_+|FHA-domain-containing-protein	gnl|CDD|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	1.45263e-15
NC_009767.1|WP_012120646.1|2747563_2748577_-|methyltransferase	gnl|CDD|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	1.66598e-101
NC_009767.1|WP_012120638.1|2737628_2739041_+|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	5.82936e-06
NC_009767.1|WP_012120643.1|2744051_2744921_+|DNA-adenine-methylase	gnl|CDD|223415	COG0338, Dam, Site-specific DNA methylase [DNA replication, recombination, and repair].	2.11478e-55
NC_009767.1|WP_012120644.1|2745005_2746343_-|S41-family-peptidase	gnl|CDD|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	1.8058e-93
NC_009767.1|WP_012120645.1|2746786_2747560_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl|CDD|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	2.96815e-65

Protein sequences

>NC_009767.1|WP_012120639.1|2739151_2740018_+|CHAP-domain-containing-protein
MARIGADLEQLRATIASLRQGNANLQETFQRTRQAMQALQSSPWAGRHRQQAEAVWERIQAQFTPAINALENLTARTEQFAHNLEAAGSRFNDGAAISSKAPTAPGVDTMPKSPLPPGDGAINGQQPPPYRPFESGPTTVPGVLQDTAGCTNYVLRRVNLDDMKRWPNAHEWNEAARNAGYVISDVPEVGSKGAIMVFEAGLLKGAYSSDGHVAYVEQVERDPDGTLRVTISEAKPVENNGEIVWGTHTPPTTRTIALRVGEDGKVASIDGNPISPNDVSFILGRRAM
>NC_009767.1|WP_012120638.1|2737628_2739041_+|hypothetical-protein
MAQQSYTLHLEAGRSMPVELSTDEPIYRLIDRLVQEHRLPSTDQHGRRVQYALYADHTRRLSREMSLRQAGYDQGGNLYLANVDAPWWEQTPALTRRLSHQSETKQDNRLRLYALLGGVFVVLTIGIVATLILFSVRRSPQVAQQPTLTVKSDMLVERSPTSTLAPLPMSAATAATATDGLPATATLAPLPTTAATATLASLPTAAATAATARDGLPATATLAPLPTAAATAASAPPSTLTVAALPTTAASPAQPFAVFPTATLVNLDADAVTVVGVKREYLDRGKRLFFQGRTSFGAYLWNEPELRTRLPASQGNVVISNGDRVAILSQENGAVHVRILTNALDPADPKVIGATGYLPRWLVFDEGVPPPAPTATPNPGKLFVYKLNEDDQPGCISMRIVRTNASGWSFVVDGTNLRGRFDNAGNARLCGLGADQEVTISVLDRNGRIIPGGRSVPSKGRAIMIGEWRQ
>NC_009767.1|WP_012120637.1|2735433_2737509_+|SpoIIE-family-protein-phosphatase
MSTSTASFDIDARTDRGRQRSNNQDSIGRADQWTTDRHQPIDRALRERYGRLYIVADGVGGNADGADASRMVVDEVMRVFYFDPAGVLPEEPVERLRAAIEHANNRVHAEAQRRRNNMASTIVAALIHNDTLTIANVGDSPAFLCRNGQSPQRLTKAHIRREADGSTALAQAMGDPRVYPAVFSLPLQQGDAVVLCSDGLTDLVQPTEIAEIVNGKTASAATRALIALANRRGGHDNISAIVVRNAPPPVSSVSPHMSKRLRLLIISLPVAILLAVFVIALPFLNPLPDTGGGAVRPTAAAQNLVIPGSHNNPSDLAQLPTVTLGALPTATDTPTPAPTRQARPTMRPTLISATPVTTTVVTEVSSADNPSPTQTPELKMPNVIGKSRSDAEQIIKDVLKVAPVIEEVRDDSATPSDHVVATEPRPGEPVRSGVPIKLRIKSRSSSAPPDHNPAPNNPPSAPDKPPSPPDNPPAPSATPTPGLSAPAPSLTPTKSPGPSATPTTPSPGPSPDNSGGSGGTGGTGGSGGTGGSDGGSGGTGGGSGGTGGSGGTGGSGGTGGSGGTGGSDGGSGGTGGSGGTGGSGGSGGTGGSGGTGGSDGGSGGTGGSDGGSGGSGGSGGSGGSGGSGGTGGTGGSGGSGGSDGGSGGTGGSDGGSGGTGGSDGGSGGTGGGSGGTGGTGGSGGTGGGSGN
>NC_009767.1|WP_012120636.1|2734165_2735203_+|serine/threonine-protein-kinase
MPELPVPSKLGRFEVIELIGVGLTGEVYQARDRNGAMVALKVLARSKQRDPTVFGYFTNEQTLLREMTHHRRHPHIVEYVADNLVQPPYYLATRLVEGARGLDAIIGDRMPLPVGKGAPQPAAFVVRVISQIASALDYLHSGHPTYSPIIHRDVKPSNILIDASGNAVLIDFSIASHPHYALINEKTLGTPGYMAPEQYTGEEVPASDQFALALVALHMLTGRRPLPDKATAALRQIERWRDTRYDDITQMLDHRIHTADVLIRALAHNPAHRYESCEAFADRLRRALAQDGEDVRDAARIHPVPEMPSQPARLSIPYSWIGISVVMLIALIVLIVAALSPATGA
>NC_009767.1|WP_012120635.1|2732929_2734156_+|VWA-domain-containing-protein
MRRLFALCAILGMLTLLTPSAYAQSQGCRGIEVHAAQMEFPNVVVQFSVCDAAGNRIAGIDRSAIRLTEDGRPVADFDMESIVADAQTPVQSVALSNGGASFMLTTTGASIGIVFDATQLLNGSGAQARNSIGEGRAAIEAFLLEEGEPPPPRTRSPGNIEHIGLFIPVDQPDQSLQPETLPAFTQDRYAVINTLRQSLPIRQKKTSLNAAIQSAIEATARDAQQRGAEAAVLVVSDGGDALTGDTFTALIAQAQQRRVRIVAFGFGTDKALQSNGFRLKQLAEATGGIYLERPNARAAGDAFLRVAEPRPAALYRVRYSTQIIDDGKPHSLELEVNAPDRLIYQFPLTYAGADSGIRLTPLGDALLRQYFVFAVPIALFLSLFLTLISGAMFWLSTSSSGLKGKTQR
>NC_009767.1|WP_012120634.1|2732084_2732933_+|FHA-domain-containing-protein
MTEYELWRYLEQYAQMSNAWWYSVAVLPATIISACAYFLMWLALRRTRQLPKMFLWLCVASLPTILVAPSFYVSTNLTDALARVGFGMPASEQQISRTVALQIGAYLSQVATLGIVGASLAFVTLIAAILVGGYAPPQVIQSIQSISQSFSKAMTRAFGPSREARVANSKYGVLTVTRGGAQQGAKFSVINSAIIGKVEAHIVVTDPVVSRKHARLEVKNDTVFLVDLGSTNGTFVKRSGREFELNGDPFELRHGDYIYLGVPSEPESVELIYERSPAGGQS
>NC_009767.1|WP_157042623.1|2727432_2732088_+|cell-division-protein-FtsK
MLAPSDMRASKDDTGGPETFNRPPRILRILPTDEIEIPAPPAPPPLALSASLGFILIPAVTGVFYLIALVARGGQGGSVWFSLPIIIISFVSVGFGVWNYITQRRVQERARLEYANAYAETLAQVRAHLRRLDDDQRRVREENDPDPAALMDIAGGRGADALPEARLWERRPHDDDFLRLRVGRGDLPTSIAIKPPRANQFQYSPELRQALDLAREFSIVRNVPVTLPLRERGSMGIAGSDERVISFVYALVWQIVVHHAPNEVRLAAFWSIRFDSFWSWLRWLPHTRAFDDESYRLLARYDGDPEHLIQVRESLQRELRQRSEYGAANRPHVVVILDSYPDFGARDDMFGDLIVRGRDLKFSVLCLVNDARQTPGDCDGYIELASRSTLAFAGVGGGYQKFIPDTVSRDDSDRLARRLATVTQVMLDARRELPRSVRFSTILGLGELKSYKPDSWWCDPENPSDSWHPAPVGMTGPDVHQDRLLINLNEGFHGVHGIVAGTTGSGKSEFLLTFLMSLAVLHSPDRLNLMLIDFKGGATFKDLENLPHTVGMVTDLEGYQAERALLAINSELDRRKNRLQRVGAANIREYRRKQRSEPSLEHIPNLMIVIDEFDELVRDYPDFVNELIRVAKQGRSLGVHLLFATQQPSQVKEGLLRNLTYWIALRVTSPDDSKTMVSIPDAAYLTTETPGRGYFRVNKQVVAFQSARVTIPYQPFEQGESYGEVDITGRRRVISAQDLGIERFVDSVASICDHYHHDANALHAMVVKVLDQYEQALQRRELPQPVSDDRRTFQSIIDNALRRYLEVCQHADVSPTDEGRAIIRTMVAQLQGKHEVDTELALIAQAMEQARSPQYAASKYRVWTMPLPADIPLVTLLDQAPADHWMKAPVGLLDYPTRAEQRPLVLDLIGEHGNVLVVGAPRSGKTVLLRTLMLALAINHSPKDLWIYTIDSNGRGCGMALSTEPADDPRDRVLPHLADRLTPQDSARIERLLVELDAAIEDRRRLFREYGADTLHDYRQRHSRNPSLPSPPPVILVVIDTIADLVDAQPESTIESFLAIIREARSYGIAFVATAGTAKEVSRWQGLFETRIVLRVSDENDSDALLGKKVAFRIRADQPGRAFLRTSNGPVELHIAFPALRDTQQYARGRQPDDMMRYTNLEEQQLAHAIKIAARRYRALSSFSLPHPLRLLPERIELKELLDETTPPAIPFARDNLTLRPVLLDFDGGMNHLLIAGGPDSGKSEALRAILCALALRSTPDQTRFVLVDYRRKTLDIFAKSPFAGEYPVKIPDHPVPAPTSFANAKGEQRAVTLVTTEAELAGLCMALLDDLQKRVKDGVAEPRLVLVVNDLDLMIGREPEYLASLASYAMRGSDIGFHVILAATDFSSLQNNQLVKAIRTERCGLYLGKPVEAGSDTPNIAGVGVKWTKTLAKAQFPPGRGLALVRGQQMLVQVALATSDLLNTLVCPPQNVAADDHSAMSGTADSREFVDGAAITDLCAVPECIDGDHPLRGEVGQLPDLQTVTAFSNGASAAIQSSDGNQESDNRREL
>NC_009767.1|WP_012120632.1|2727033_2727315_+|WXG100-family-type-VII-secretion-target
MAPISLDPEQARSTASTFDGCKGTIEGELSRMMGSVNEVLATWSGQSRQQFEAEWDQWTNRLRNMMEELQGLANGLRREADEFESVDRSFVSA
>NC_009767.1|WP_012120631.1|2726261_2726963_+|FHA-domain-containing-protein
MEYEFEVCWGPSQCKTVVRAPYQTISEVIETLVVQLNLPRYDAREQRIEYGLYRDREEKRERIQDTQTLAQARIRAGRVYIANVTAPWWQTKATETPPQKSGTDRLPRRKLPVTPSRSYVCRLQLAPNCVVVVQGDYLELNRNYLSEKLPSAMVLAEKARVFSGYNSRLMHVSRTRHCDLFRQHEQWYIRAHKPTYVNGQVLNHGQTSVIQPPGTTIVLGQGGWSVTVELIEQ
>NC_009767.1|WP_012120630.1|2725042_2726044_+|helix-turn-helix-domain-containing-protein
MRHDLLDLCLPLLLYADEMVQRQATLILMTTFGTHAFTLLRRRLGASDPDACREATEALRVLERHSGHPAAYRPFRGIHIECLGTFHVYVGNQEILPHHWAQANGSRAGSRKVQAVLAYLVHRGRHGATSEEILAAVWDSTGSAGALARTITALRRTIEQFGGSELAERALVYADGRYILKPTAYTSDVQAFEQAIHVAEQTESERDLATAAPIYRHACALYNGNYMAMIKMAADDIEERRVELLNAFLNAIERQAEHEYQNGNDDRCLALCRQGLRFDPSDSAITLWKLRCLARQRRINEVKREYWRYLRSLGVPPDAEDPVVLWMNAHSSR
>NC_009767.1|WP_012120641.1|2741681_2742518_+|hypothetical-protein
MVSTLRLSTDELAFALLLSDQPVAAQQVLVSSIGRELSKEEAQGRLSAAGNALFGQGLVDIRDDGSIVSSPVLTEVSLVLTRAAATLRFTLSAPTGQRALSYHFLDDAIYEHWVDRGVAHVVSRVSEDAIMEGCVAFFNLSDLQEIAVATGMLPDAVFRQALRQHDVTATIGLLRDYGIAEDTGMLLAEDMVHTQAIGDMLAIYYHGDNRAPMSDEGCLVVLGQQRFWLFQPVKQGEDVQVMLLPGTIDSVREQVQRLTRVCRQIAAREAAVARTGKE
>NC_009767.1|WP_012120642.1|2742915_2744046_+|hypothetical-protein
MQQESLTFNGFISNVHYTACLAAELPEYDFNEFDINKVKPCGKIIVPDGALAYTKWVSPKRTRSYPFARLYDILNAPKRITVIPVLKDEGADGDLDRIQYSTISWMNLLDIYIILAYYNSAEKNQREGQTGKNKISRQMFASECVKEQIDEVMKYKNSALHWNFYVMETRFVDIYNKALNSYEEISCRTGVSMHNSTIQKDYLNKITNDFEEFKGLPLSGSKGASLREVRTTHINEHLADGSKARLNIRNYLGGVYYLTADEVINDGSRYVIQESKNATKRSLPSLDDIKDGIFKLALFSNIDALMLEDRKVEFSVRLKLTGKGLCETIMIPCSNCELEQFLARNTFTGREKEIIRKLQVECFYNPRLHVQIGPNQ
>NC_009767.1|WP_012120643.1|2744051_2744921_+|DNA-adenine-methylase
MIRSPLRYPGGKSRAIQRMLYLIPDSFDEYREPFVGGGSFFILLRQKYPDVKMWINDLNTELFYFWKCAQEDSARLAREVMKIKVERANGRELFYELLGMDTSKMSEFERAVRFFVLNRITFSGVVEAGGYSEGAFIGRFTRSSIERLALLGEILEGVRITNSDYKDLLQDGDQRVFTFLDPPYFAATKSRLYGKNGMLHEIFDHFEFAEQMKKCRHSWLITYDDSPEIRQNFHFAYMHRWELQYGMNNYKQRKAEKGAELFLSNYPLPIGQEASPALPDSVFIQRSLW
>NC_009767.1|WP_012120644.1|2745005_2746343_-|S41-family-peptidase
MAFRFRFLRRLAAASLFLLAGFAGGWVSATIFADSISLTRLVPAIGPGLVANQETPPSLRQQFRVFWEVWNLVETEFYQRDKINHTRMIRGAITGMLASLDDPYTVYQEPELASQTNEHMQGRMGGIGTYLRITDGRAFLYKPIKGAPAEAAGLKQDDEIVAIDGEPVAPMIAGLDVNEAAVKVASKIRGQAGTQVRLTIRRQPDDQVFDITLTRADIVVPGVEAQLVDGGIAYIRIIEFKANTVPEFDQALRELLPQAPNGIVLDMRNNPGGFLDQARAVLGRLYNGVALYEQNSKGEITEIRTVGGDIRAFDVPIVVLVNGSSASASEIVAGALRDSRPNVTLIGEKTFGKGSVQNIYHLSDGSSARITFAHWLTPARTEIDKVGITPQYVIPYAEDPATQTLCVGDRQPPPGATTCADNQLFYAIRLLRTGEAPPSMPAAAR
>NC_009767.1|WP_012120645.1|2746786_2747560_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MPRRSRDTVQSNTYRFFVDPAAFDTERVRLFDPELGHQLANVLRLGRGERVVLLDGEGWQYTVMLETVDRRGTVNGVIESREVAGGEPRLALTVYLPLIRAERFEWALQKGVELGVAAFVPTVCARSIDAAPDERRLARWRRIIREAAEQSRRGRLPRLAPSLTFNEACTQFTLHSPALLLWEGDNATPLAGALHALRRDTSPAALGIFSGPEGGLTNDERQWAERHGIMIVSLGPRTLRAETAPIAAIAIIMYEIG
>NC_009767.1|WP_012120646.1|2747563_2748577_-|methyltransferase
MESDGQTKPVTWLELSVSCESEAVEPVSELLARYGYNGGVAIEPPIIPGDDGPEYRYDPVRPATVRTYLALDDTAEETRARIEQGLWLLGMIRPVGPLQVRRIEEEDWANAWKQYYTIQRIGARIVIVPSWLDYQPLPDDLVVRLDPGMAFGTGLHPTTQLCLIALEQYVTPEMCVLDLGCGSGILAIAAARLGAARVLALDTDPIAVEATRANAALNHVADRIVVAEGSLGRGASFGHWLRPDAEGHAEPPSLLPVSLPSDTPPQFDVIVANIIARVLAAVAPDCAVALRPGGLLISSGIIADREPDVVAAYAAAGLEAVFRRQEGDWVALVHRKP
>NC_009767.1|WP_012120647.1|2748546_2749983_-|cysteine--tRNA-ligase
MSIRIYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYRGYAVQHVVNFTDVDDKIINRAHALGRDPKELAESYIAEFLEDLEALNVKRAHIYPRATETMPEIQRFISRLIETGHAYVVDGDVYFRVSTAPDYGKLSRRSLDDMIAGNRIGIDERKENPADFALWKAAKPGEPFWDSPWGPGRPGWHIECSAMNLAHLGEQIDIHGGGTDLIFPHHENEIAQTESLTGKTFARYWMHNGMLQIQTRLADGTYKLEKMSKSLGNVVTIREFLARYHPDVLRLTVLSSSYRSPLAFGEEIAADQERKLARLRSALEPPIGTIEAGPAVEVLLAAVRTARERFIAAMDDDFNTAGALAALFDLVRSINTARDAGVGGAPFAEAQATFRELVDVLGLTLIAPRPVTQQAAPFIDLLVEVRSELRKAKQFALADMVRDRLAQLGVMLEDTPQGTRWKVTDKPNL
>NC_009767.1|WP_012120648.1|2749988_2750768_-|serine-O-acetyltransferase
MPRKNDNLLCVIRDDIRAIFLNDPAARNLAEVLLYPGLHAILFHRLAHALWRRGVPFIPRLISQISRFLTGIEIHPGAVIGRGFFIDHGMGVVIGETSEIGDWVTLYQGVTLGGTGKQRGKRHPTVRNGAVIGVGAIVLGAITIGEGARVGGGAVVVKDVPPHATAVGVPARIVAQRDPHTGETRRVEHLPDPEGEMLRSLRAKVLELEERLTELEIATNHHLEHHVEDDALASQCWSALDTNGNGTIDEYGYMAGDGI
>NC_009767.1|WP_041330615.1|2750947_2751202_-|FmdB-family-transcriptional-regulator
MPTYVYACDTCGAQFEQFQSFKDEPLRVCRCGKEGSVRRVFQPVGIVFKGSGWYITDSRKSDSASIGSDSSSKSEKSETGASES
>NC_009767.1|WP_012120650.1|2751332_2752553_-|winged-helix-turn-helix-domain-containing-protein
MPLTLTPNAIRPLLLTVQGLDRPKKHPATKDSVLAAMQRMKALQIDTIHVVARSPYLVLWSRLGAYEPRWLTDLLAERAIFEYWSHEACFLPIEDYPAYRSLMLAGQTRSNTYARRWLHENRTIAAALMDHIRNNGPVRSAEFARTDGTRGGWWNWKVEKMALEMLFIVGDLMIDRREHFQRLYDLRERVLPAWDDTCAPDVEVAQRTLILAAAQALGAAPARWLADYFRTGKAETARIAAALAAEGALAIAHVAGWREPVYIHPHRLPLAQAAADGALQSTVTTLLSPFDPVVWDRRRALELFGFDYRIECYTPASKRRYGYFTLPILHRGALVGRLDPKAHRKDGIFEVKALYLEPGVDPDEDLAINLAEALRSCAVWHGTPEVVVRFCDPPAFGALLKRALRL

Crispr_ID: NC_009767_52

• CRISPR_ID: NC_009767_52
• CRISPR_location: 2821379-2821483
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_52

Consensus_repeat	Method
CTGGGCATCGACCCGGATGCGGATACCCTGTAA	CRISPRCasFinder

spacers of NC_009767_52

>52.1|2821412|39|NC_009767|CRISPRCasFinder
ATACCGAACCTCCCAAGCCTTCGCCGCTCAACGCAGCGA

CRISPR arrays and Neighbor proteins around NC_009767_52

CRISPR arrays

The CRISPR arrays of NC_009767_52

>merge|NC_009767|52|2821379-2821483|CRISPRCasFinder
CTGGGCATCGACCCGGATGCGGATACCCTGTAAATACCGAACCTCCCAAGCCTTCGCCGCTCAACGCAGCGACTGGGCATCGACCCGGATGTGGATACCCTGTAA

>NC_009767|52|45|2821379-2821483|CRISPRCasFinder
CTGGGCATCGACCCGGATGCGGATACCCTGTAA	ATACCGAACCTCCCAAGCCTTCGCCGCTCAACGCAGCGA
CTGGGCATCGACCCGGATGTGGATACCCTGTAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120702.1|2820043_2820736_+|hypothetical-protein	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012120694.1|2809166_2810570_-|dipeptidase	unknown	unknown	gnl|CDD|349929
NC_009767.1|WP_012120695.1|2810581_2813125_-|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223107
NC_009767.1|WP_012120707.1|2841906_2842773_-|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|366542
NC_009767.1|WP_012120700.1|2818489_2819224_+|hypothetical-protein	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_049768826.1|2840285_2840999_-|dienelactone-hydrolase-family-protein	unknown	unknown	gnl|CDD|223489
NC_009767.1|WP_012120699.1|2817245_2817923_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NC_009767.1|WP_012120701.1|2819245_2820022_+|hypothetical-protein	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012120708.1|2842769_2843546_-|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|366542
NC_009767.1|WP_012120696.1|2813142_2814384_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NC_009767.1|WP_157042820.1|2814449_2815835_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|223154
NC_009767.1|WP_012120698.1|2815870_2817208_-|MFS-transporter	unknown	unknown	gnl|CDD|340890
NC_009767.1|WP_041330631.1|2821551_2837082_-|isopeptide-forming-domain-containing-fimbrial-protein	unknown	unknown	gnl|CDD|380149
NC_009767.1|WP_012120710.1|2844641_2845769_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_012120693.1|2807630_2808965_-|DUF4038-domain-containing-protein	unknown	unknown	gnl|CDD|379072
NC_009767.1|WP_012120713.1|2848948_2849431_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012120712.1|2848098_2848425_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120711.1|2845958_2848037_-|NAD(+)-synthase	unknown	unknown	gnl|CDD|235057
NC_009767.1|WP_012120709.1|2843574_2844645_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_012120706.1|2841245_2841989_+|lysoplasmalogenase	unknown	unknown	gnl|CDD|377946

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120702.1|2820043_2820736_+|hypothetical-protein	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.17389e-16
NC_009767.1|WP_012120694.1|2809166_2810570_-|dipeptidase	gnl|CDD|349929	cd05680, M20_dipept_like, uncharacterized M20 dipeptidase. Peptidase M20 family, unknown dipeptidase-like subfamily (inferred by homology to be dipeptidases). M20 dipeptidases include a large variety of bacterial enzymes including cytosolic nonspecific dipeptidase (CNDP), Xaa-methyl-His dipeptidase (anserinase),and canosinase. These dipeptidases have been shown to act on a wide range of dipeptides, but not larger peptides. For example, anserinase mainly catalyzes the hydrolysis of N-alpha-acetylhistidine while carnosinase degrades beta-alanyl-L-histidine.	0
NC_009767.1|WP_012120695.1|2810581_2813125_-|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|223107	COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism].	6.687e-147
NC_009767.1|WP_012120707.1|2841906_2842773_-|sugar-phosphate-isomerase/epimerase	gnl|CDD|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	6.58247e-22
NC_009767.1|WP_012120700.1|2818489_2819224_+|hypothetical-protein	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.31454e-16
NC_009767.1|WP_049768826.1|2840285_2840999_-|dienelactone-hydrolase-family-protein	gnl|CDD|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	2.26318e-44
NC_009767.1|WP_012120699.1|2817245_2817923_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	9.51469e-13
NC_009767.1|WP_012120701.1|2819245_2820022_+|hypothetical-protein	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.43935e-16
NC_009767.1|WP_012120708.1|2842769_2843546_-|sugar-phosphate-isomerase/epimerase	gnl|CDD|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	8.09852e-20
NC_009767.1|WP_012120696.1|2813142_2814384_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	3.8819e-39
NC_009767.1|WP_157042820.1|2814449_2815835_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|223154	COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].	6.60335e-91
NC_009767.1|WP_012120698.1|2815870_2817208_-|MFS-transporter	gnl|CDD|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.10505e-95
NC_009767.1|WP_041330631.1|2821551_2837082_-|isopeptide-forming-domain-containing-fimbrial-protein	gnl|CDD|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	6.3979e-53
NC_009767.1|WP_012120710.1|2844641_2845769_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.29446e-63
NC_009767.1|WP_012120693.1|2807630_2808965_-|DUF4038-domain-containing-protein	gnl|CDD|379072	pfam13204, DUF4038, Protein of unknown function (DUF4038). A family of putative cellulases.	4.12657e-162
NC_009767.1|WP_012120713.1|2848948_2849431_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.52037e-11
NC_009767.1|WP_012120711.1|2845958_2848037_-|NAD(+)-synthase	gnl|CDD|235057	PRK02628, nadE, NAD synthetase; Reviewed.	0
NC_009767.1|WP_012120709.1|2843574_2844645_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	4.91246e-72
NC_009767.1|WP_012120706.1|2841245_2841989_+|lysoplasmalogenase	gnl|CDD|377946	pfam07947, YhhN, YhhN family. The members of this family are similar to the hypothetical protein yhhN expressed by E. coli. Many are annotated as possible transmembrane proteins, and in fact they all have a high proportion of hydrophobic residues. A human member of this family, formerly known as TMEM86B, is a lysoplasmalogenase that catalyzes the hydrolysis of the vinyl ether bond of lysoplasmalogen. Putative conserved active site residues have been proposed for the YhhN family.	1.01969e-13

Protein sequences

>NC_009767.1|WP_012120702.1|2820043_2820736_+|hypothetical-protein
MSSTMTAAAPIVYPDSDGMPMADNTQQFRAIVTIQGNLEALFRDRADVFVAGDLLWYPVEGRPDIRRAPDAMVVFGRPKGDRGSYRQWEEEGIAPQVVFEVLSPGNTLTEMAAKFEFYDRYGVEEYYLYDPASGDLSGWRREGGRLRVIEEIDGWVSPRLGVRFRREGGEVRMYLPDGRPFLSFVELQDQLERERQRAEAEQQRAEAERQRAERLAARLRALGIDPDEDV
>NC_009767.1|WP_012120701.1|2819245_2820022_+|hypothetical-protein
MSSTMTAAAPIVYPDSDGMPMADNTQQFRAIVTIQGNLEALFRDRADVFVAGDLLWYPVEGRPDIRRAPDAMVVFGRPKGDRGSYRQWEEEGIAPQVVFEVLSPGNTLTEMAAKFEFYDRYGVEEYYLYDPASGDLSGWRREGGRLRVIEEIDGWVSPRLGVRFRREGGEVRMYLPDGRPFLSFVEVQEQLDRERQRAEAEQQRAEAERQRAEAEQQRAEAERQRAEAEQQRAEAERQRAERLAARLRALGIDPDEDV
>NC_009767.1|WP_012120700.1|2818489_2819224_+|hypothetical-protein
MSSTMTAAAPIVYPDSDGMPMADNTQQFRAIVTIQGNLEALFRDRADVFVAGDLLWYPVEGRPDIRRAPDAMVVFGRPKGDRGSYRQWEEEGIAPQVVFEVLSPGNTLTEMAAKFEFYDRYGVEEYYLYDPASGDLSGWRREGGRLRVIEEIDGWVSPRLGVRFRREGGEVRMYLPDGRPFLSFVEVQEQLDRERQRAEAERQRAEAERQRAEAEQQRAEAERQRAERLAARLRALGIDPDEDV
>NC_009767.1|WP_012120699.1|2817245_2817923_-|TetR/AcrR-family-transcriptional-regulator
MDGPSHEATGSTVERILTIAATLFAEHGYHGLSMRTLAAAVGLNIATIHYHVSSKQELYKAVFRRLAERERALIAAYTHPLTDDDITDPVALQQRLNALVDALVDLTIEQPETPRLWLRRWLERDESPVAVEAEVSLPLYDMVLTALERAQSAGTITATDIDLRLILTSFVWILYGYFAGSPLDATGARVDPTNPERVAAFKRFLHVYTARMLGLPDNPGIKQNP
>NC_009767.1|WP_012120698.1|2815870_2817208_-|MFS-transporter
MGRLLRYIAYSMGNFANTIAYQVFGNRIQFYYVDVLGLNAAAAGVIWTIYGLWNAINDPLMGQLSDRTRTPMGRRVPYVLFGAVPLGLSFFFLWTPPGQSPWLLAAYFLIILFIFDTLYSLTIIAYNALFPEVAPHLKARIDLSAVREVLATIALLLSFILAPILAEGVGYIWMGAIMGTLVAVGYLISMAGVREDISKIKDDRFGLIESLRIALSSRPFRWFIGANIAKEYIWLVLAAMLPFWRKYALGIQGQTEVFGMRLSGGDAEAILLGVPILLTIPMLLIWRPMVARIGPRRSWIITSFCFIPGFLAMILANDFYTGLIGTLLVVPGLAGSMIMPFPLISEVIDDDAARHGYRREGIFFGINGGITKLAFSAQGVLFAAVLSLSGYVAGSDAQPESAAWGVRFLIGGTPMIAALLIAFFMWKYPLERAVRRDLALERTSS
>NC_009767.1|WP_157042820.1|2814449_2815835_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MTLLHGFKAQDMDWRSGRVFAYIYQPAEIAATLVKEAYSLYLSENCLDPTTFPSVAQLENDVVRMIAGLLQGDECVVGNMTSGGTESILLAVKTARDWARAHRPHVTQPEMILARTAHAAFHKAGHYLGVKPVVVEFDPVTFEADVTAMRAAITDNTILLVASAPCYSQGVIDPVPAIATLAQEYGALCHVDACVGGMYLPFLRTLGRTIPPFDFSVPGVTSISVDMHKYGYAAKGASVVLYRDRSLRRHQIFASTETTAYTIINPTALSSRSAGPIAGAWAILNYLGEAGYRDLVATVQAATERLMAGVDAIDGLYVLGRPAMSMFSFASQAINVFQLADALRRRGWYLQPQFSTPRSPRNLHVSITYGVAHNVDALIADIAACVEEVRHMPPIDLALVRSVVEALTQDPSPAVVEGLMAAVGLQPGALPQEMALINEVLDTLPDAVANEVLIDFFNNLY
>NC_009767.1|WP_012120696.1|2813142_2814384_-|ATP-binding-protein
MTIFRQIQHRLPEPTTRRLVMITGARQTGKTTLARRLYAQLRRLSLDEAEERIRLRELPTRAWATTIGEAVLDEAQKEPAIFEKIKFAYDQGTINFSVLLGSSQIVMLQRIRETLAGRVFMYELWPLMLSELVGGEHPSPLTLLARLCEEEGDADALLSDQPPVLLGEEAYRRAFWFDYGLRWGGMPGLLELTDSDRRDWLASYANTYLERDLADVARLDELVPFRRFMRLAALRSGQTLSYADLARDADISPGTARNYLNYLQLSYQVFLLLPYVDSPGKRLVKSPKLYWIDPGLWRYQTGYWGDASGALLESYVVGECFKWLRTTGTQAECWFYRTHSGLEVDLLLSTASGIWGIEVKSSPEVRLSQATALRRLAAEFGARWRGGLVAYPGERLERLDTNLWAMPITRLFS
>NC_009767.1|WP_012120695.1|2810581_2813125_-|SDR-family-NAD(P)-dependent-oxidoreductase
MHRMTHPQRTWLITGCASGFGARLAQRLIERGERVAATDRSVDLLTRLHSDDPARLLCLAMDVTDPDAIRRAVRTAVAHFGRIDVLVNNAGLGHGGPLEEAKLEDIRRLFDVNIIGMILVTQAVLPHMRNAGRGHIINLSSDSGVVGFPFQGIYTATKHAVEGFSDCLYQEVTPFGIHVSVIQPCGMFKTDMPASTITAARAAMRPDSPYYARAVRMAEALAAAWEQSSDPQEVVDAIIETADANSPPLRRRVGPPERTGLVGLRHRMPHEEFVRFIASVTGDGATRPAMPKGRVDGGRLVVRTLREAGVTHAFTIVGGHNYHLINACREEGIRVIDVRNEMHAAHMADAYARFTRRPALLTVDAAPGLVNAVAGIEVAYEAQVPMIIACAQGSLEGRDIGVMQAIDQVRLMRPITKWQRTCFDVRRLPEYTAAAVRHATTGRPGPAFLDFPLEVMHAVIEEDTVTFPRHYRVTVGPPGDPALVRQALDVIRKARRPLLIVGSGVWWARGEEELRRFVETTGIPVLSRNLARGIIPDDHPLSAGFYPTPAAMADAFLVIGTRLDWTIGYGRFPLFSMDAPVVQVDIHPESIGKTRPIDLGIVGDAAQVLRQLNELVAEGSDWAMEKEWSHIAHGSIGAMRAETAAAADLAARDPARPMHSIQLMQALADCLPRDTIKIVDGGYSAAFAIQYLDACVPGGVTWVGSTGHIGVGLGFAIGAKLAHPDHPVVAIMGDGAFGLCGMEFDTAVRHHLPMIVVIANDAGWGETRDGQRRRWGDAAVIGTNLGPTRYDELARALGGYGERVERPEAIAPAIRRAFDSGLPAIVDVRTDPEQRSAAVTGLPWIVE
>NC_009767.1|WP_012120694.1|2809166_2810570_-|dipeptidase
MSGSTASETLATVIAHLRDRQHAHLTALGEFLSIPSVSMDPAHAADMATAAQWMVDCLQRIGMTRTEIVATAGHPIVFSEWLDAGSAMPTLLIYGHYDVQPADPIDAWHTPPFAPSIRDGNLYARGASDDKGQVMAVVAALDAWLHTFGRLPINVKLLVEGEEETSSVGLRRFVRTETERLHCNAVLMVDSSMLTPQHPLILYGTRGNCYLEITVRGPASDLHSGTFGGAVENPFNVLVRLLASLQDGDMRRVQVPGFYDRVRTVDDAERRLLASLPLNDAVLQAMTGAPALAGEAGYSAIERASIRPTLDIHGISGGFTGPGKKTVIPAQATAKLSMRLVPNQDPEDIARQVIDFLRRQAPPTVSLDVHILSASRPVLIDYRVPEVQAASQAFEKAFGALAGFMIGGGTLPIAADFQEALGAPLVITGFGLPDDNMHAPNEKLNLSCFFRGSEMIAHYLAALASCP
>NC_009767.1|WP_012120693.1|2807630_2808965_-|DUF4038-domain-containing-protein
MSLPRICVSTNRRFLMTESGEPFFWLGDTAWELFHRLSLPEAEHYLNARRQQGFNLIQAVALAELDGLHTPNAQGHVPLLGDDPTRPNEFYFRHVDAIIRMASDKGLYIGLLPTWGDKVHARLWGIGPVIFNAGNARIYGRFLGERYRNDTNIIWILGGDRPAHGYEEVWAAMAQGITEGSGFKPFFTYHPMGGTSSSAVLHDADWLDMNMLQSGHCLMDAPNWEMIRADYERTPTKPALDGEPNYEHHPIDPYLRPWKPEYGRFTDYDVRKQAYRAVFAGACGHTYGSHSVWQMWSSRYAPTTFPSLPWDEALYGPGAQQLVHLKNLILAHPYFTRIPAPDLLPDVAPIPLPVDQEDRINPVRAAHPVATRDSEGTYGLVYFPMAGQSLRVDLRVLRGEVRSAWFDPRSGATHPIGMHSQGIVTFVSPIGGPDWVLVLKAEQP
>NC_009767.1|WP_041330631.1|2821551_2837082_-|isopeptide-forming-domain-containing-fimbrial-protein
MRRRPTLRFAPLLTLLVGALTIGSFFLGTIALAAGNPLPVATVNSASGLIGEPVTLTVTFDNASTGTGDQTGYGPYIDLFLDTTGPDGAPSFDGLVTTDIRATYLNQPLPGLELITISGPTYVHPLTGQTLSVPGYGTRFQNGDTIAVLTLPFGSFTNTQPPAPIDVTLRISNLADLGTPLPVTAIAGFRYGADPLDNPGADPPIRQTTPSDADVTPILWRLTKTYLGPEDETATGRNYPRRYRLDVDIAEGQPVTNLQITDTLSNSMRITGNTAAQMSARLYNTPGVPTEVFNPANLSGTATPAAPGGTLVYTFGDKTGVRGVDASFEFEFYIPRDTSAATPTVPQGTDSTLANNTGSSSATWTPIDTRDAPTSITITLPPDAHTLQQHSLATQKSVTPVDRATLAPTGGVIIPGQTLLRYDIDFQVSDYFAVQNVYLEDIISDGQRLFVRTSGGPSTVPTLQVENAYVTGASPTRMNVATAPFGGANTIVYEQRFTTRSTPLSDPTSPPSGSVFVINTPAPSSSGTTYVRFNISQELIARGFSGRLVGGDIPNAGGAPQNNNPPLFGPTQGRITFYAEVKDEFSDDFPSGDRSVDQLDILRNTVPQIRGEQINTTTINNPTPTVIGQATDDTAASVELPIGDRSKTLYALNGQTTNLGDPVTVQPGDLVTYRLTYRLPISSFENIRLIDFPPLPVFPVPDRMFFDAAAAPGTIPGANMVTRGPSDTYLTTINPPTTVRVATTANITGYNPAGIGSFSGAPTTIDGVALANGDRVLVKDQTDARQNGVYVVVDATTGAWNRAADFDTPRELTNGPLVGVTAGATNANQHFRQSNQNFNTFNTDPITWAPFITTDAAGNSFTLNFGWHDDVDGGRRSSLIDVLVTLRVADAAFANDLFLTNQLRVSESSTNAGSKDFDEIVMFEVIRPNVTINKGIVGYNASGLTLGGVTFNPPDGPTTFTGAPVYTNTQALAIGASDSLVLTDAGDRVRYAIVLQNEARGDAYDVTVTDAIPSAYARPATLAAANFAVRRGDGTLLTGDVVSGTVRVATTAPLTGATFTTTPNNGQFTNAPRTIDGVTLNVGDRVLVKDQTSATQNGVYVVTAVFPGVNQATLTRADDFDDNTELTGGYRVAVLGGLSSNANRAFSATGPITLNTTPVTWSDAGISDYYATYNPLTGAFSVVLADNYTAGNTTAPTRDDRRGGLSRGASGPSSNIVGVTNGSNTIIITYDVTLGDNVEPNQQIINTATLTNVATSDGGIDDLPDPFDTALVTIRRPEIAKTLTATEIENATNARQQAVIGELVTYTLILTVPEGVMSNAALTDTLDVGLAFVDVTGVTASPSLSFVGGGLPTVGATPANTTIGAGGQTLVFNFGAITNSDRNNAADETIAITYRAVVLNTVANQSGAQRNNRADFSWDVPGQGSYALLPVETENVTIIEPTLAVGKTLPPGPYDAGDTIDYTITISHTAGSQTDAYDAVITDTLPIDPFGSGSLILTPAVLSVTDSASLLTTADFTLTGSDATSWTLSNPTPIDVAQGRTISIVVRGTLSNAAMPGATITNTAFLRWTSLDGNPGQRSTHAADSTERTGADGPGGALNDYAATGSATFVIPTVTPGKALVATSEAHTSDSNVTIGEIVRFRIAIGGPEASVYAFSLVDRLPPGLTFLNDGSARFAFIANSNITTAGVYDVAPVSCPAINPTGVATLADVLNPTILPSSSINCTFGDSNISSNETTNQDVYGSGTDVFFRFGNLSNNDNDADEEFIVVEFNAIVDNDTTDPNDAGDVRNNTVVARMNPPGFGAFETDPSAPTSVTVVEPNIAFNAATNNKTATPTSGDAFDLITYTVTFANATGAMVSDAFDARILDTLPADVTLIPASISVSSAGGCATGVTNASAGNTVDVTIGRVPPGCNVTITYQATLNVSVVPGQAITNTASLTYTSLPGNTGTGGFFGSTAGTSGSATGERNGSGGINDYAGSDTAMVTIVAPALAKRIVATSEAHTADPLVLADFNNAGFDGFLPGSVFTGGNNTWDDAPGNVTVFSTFVRIAGNSTERGGGFITFATPVDLSNHTALALSARLVAGNGANNIDIHLQDADGTNWRWRFPASNFTTSTFTLVPQNLLGPNSTTIAAGTTPGLDLRNIVRLEIRGDDGTAQFDIDIDAVIAFGNIAAPGEIVRYRLVTTIPEGTSPNLQLLDRIPTGMRFINDNTARVAFVSTNGITSTSAGAQVPALSGTGLNITGNQDSVVGLSLAVGSGNGLAIGEGTAFDGNVSSSNDVLTDTDTYNNGSDVFFRLGNIVNNDNDDDLEFIVIEFNAQVLNVFNVGNQSGVGLNNDFQYFRNGSQVGSTSAQNGINRITVVEPQINNLSKTLASAPPVDAGDVFTYTLRFANGVAWPTSPAVPVRVATTGNIAGFNATGGFGGTGQFANAPATVDGVTLNVGDRILVRSQTNAAENGIYTLVFIDPFTGARVWDRATDMDDTAELALGYRVFVQEGATLAGRTYYLDEPVPTINAGALNWREVAPAMTVAVATTGSLGGANFNSSGGLLGRGTLTTTATTIDGIPVNATNFPVGTRILVKNQSTAANGVYQVTGFTSPTLTLERVPEFDSHLEAVIGAQVYVTGGTINAGRTFAVQTAPSETPITTSTNFEIVDQVAAFDVTVFDQLPPTLELLGVQIDAPTGTTATNGSTLGVGGVISYTLDRLDSVQDITAGRNDVVITATVRVVTGTVASAQITNTARVQYTSLPGARGTLSNPTGSNVDAGTAGTQNGERTGQGVLNPTNNTPPSNNGIRNNYSVGAIALNHLAAPMFDKQFQGGSISDDDSSVPGTSGASVAVGEAVLYDLRVTLPEGTTNNLRVVDAVPDGMRFDTSFNGGLGYQIVTTAGGSLAENFSDPAAVASPTLSVSGTGTLGQDGVDALFSFGNVTIADDNNPNNNSFIIRVRLIATNTAANQSGASRDNGGALRYTNGYSGGDNELRDPTEPRVTIIEPTPSILKSVSGAAADAGDPITYTLRIENIALRSEMDAYDVVISDTIAPELINPTIVAVNVTGAPDVSAADFEIATVGPDRILRTTAPITLPLGATVTITFTGDLTSTVTTDQIITNRASMFWSSTPGTNPDERTGADVPNPPECSSLPGDCNLDSTQLNNYGLISSVTTTAIAPVVVSKSVVEGIAPSTPGTDVTIGEIVTYRLAVSLPEGVTSGLVITDTVPSGMAYLPGSATLITGTLATGDPPLAGGHPTDAGSLAFNGVFSDTTDPSVTPIGSGQFLNGTGIRFEFDQITLPGDNDARNNTFFIRYQVVVLDVAGNTGFSGSQKTLTNSGQFDVPSTPQPPTDLLIDPNGATVTVVEPELAIAKSVTPASGDAGDAVTYTITLSHTARSLADAFDVAISDALPATVGSSLTAPITIANVNATHSVDGDITGNFSVAGNTLTTTTPFTLPRGETVTLTITGVLRQSVQPGEVITNTAVLTSTSLPGPNQDLSPDATGVSDGTDRERSRSSSSSATHSVGQGAFSKAILSTSATHTSGTDVTIGEVISYTLIVDLPEGTIRDLTLTDDLPAGLDYEGVTVITDAAQSGGLLTQDFAGTVPSITVTGGAGSGDDVTFTFTGDVVVTGDNDAANNRFLVVARVRALNEPGMVGLIPPGQTILTNTATMRYTDGSNITRAFTDTETVRVVEPQLTITKDIVQMVANAGDPITITLTVTNIGASDAFDVVITDTLPPEFDADTTSFGTAGSDYPATFTPSRTGNQVRYEGGPIPVGATMTFTFRVNLTGTVTPGTTITNTARMAQSTSLPGDDPTERVQTPVESSDTLTIRSNSLSGFVYVDSDNDGVFDTGESGIGGVTITLSGTDHLGNSVLLTTTTTITGFYRFDNLYPGVYTLLETQPSGYLDGTDAIGTQGGATGNDVLSNIVLPVDTSTNGENNNFGEIPAARIAGFVYEDDNNDGVFDTGENGIGGVTVTLTGTDDLGNPVNLTTTTTITGFYAFDNLRPGTYTVSETQPSGYLDGLDTAGTLGGDTTVNDRIASIALPPGAASLNNNFGELRPASLSGLVYRDDNNNGSRDGSEPGISGVTITLTGTDDLGNPVNLTTTTTITGFYTFDNLRPGTYTVIETQPSGYFDGAETVGTAGGSILSNDVIGNITLNAGVAATGYDFGEVPAARIAGFVYEDDDNDGVFDTGENGIGGVTITLTGTDDLGNPVSLTTTTTITGFYAFDNLRPGTYTVSETQPSGYLDGRDTAGTLGGDTMINDRIAGITLPPGGASLNNNFGELRPASLSGLVYRDDNDNGVPDAGEPGISGVTITLTGTDDLGNSVLLTTTTTITGFYTFDNLRPGTYTVSETQPAAYNDGRDRVGTEGGDLSNDQVSTIVLGAGVDAANYDFGELGTFVSGVVWIDTNRDGTLDSGESGRLGGVTITLRDSLGNVVSTTTTLADGSYRFDNLPAGNYTIEQMQPTGYGSSTPNTLSVTVPLTGLTDQNFGETVSTLSGFVYVDSDNDGVFDTGESGIGGVTVTLLDGVGNVVSTTLTMADGSYRFENLLAGTYTISETQPLIYSDGQDSVGTIGGAPVGTLVSNDVIGDIVLPAGIDGITYNFGELANAGLGDRVWLDRNGDGVQDAGEPGIGGVTVYLDLNNNGSLNAGEPTVTTDADGRYFFGGLAGGTYTVRVDATTLPAGVSQTYDLDGATATPHTAIASLAAGATRTDVDFGYRGSASIGDRVWLDRNGDGAQDVGEPGIGGVTVYLDLNNNGARDPNEPFDATDASGNYLIDGLHAGTYTVRIDASTLPGGIDATYDLDGIGTPGMVTGVTLSDGQARIDVDFGYQGSASIGDRVWNDANANGIQEGGETGVSGIVVALYDSTGTLLITTTTDLNGNYLFDNLPAGTYTVGIGATPGRSISPRGAGSDPALDSDVDRTTRRSNLITLSTGEARRDLDIGLYQLASVGSLVWLDRDLDGIHEADEPGIGGIEVRLLRSDGTLVATRTTDANGYYMFTDVEPGEYRIAFSVPPGYYVSPPHRGSDRGNDSDADPATGQTPIFTLTPGQIDPTWYLGLSPISPTAIQLTRFSVERSANGIVIRWETAAEFQTRGFHIERSASGSRNDAARITDRLIPARGSIGSGAAYVWSDTTAAPGVRYTYWLVEETTDGSTHIYGPATSEATTGGTYTVVLPLIIR
>NC_009767.1|WP_049768826.1|2840285_2840999_-|dienelactone-hydrolase-family-protein
MADVVIHAPDGALHAYLATPDGTGPWPGVVVIHDALGMRSDTHRQADWLAGEGFLTAAPDLFDGGTVITCLRSIIRDYLTWQGMMFRHIAATRDWLAQRNDCTGRIGVIGFCMGGGFALLLAPGHGFAASSVNYGILPDDLERAVTGACPIVANYGAKDAMLRGAAGRLERALTALGIDHDVKEYPDAGHAFLNNHDPREVHALLRVAWHVTQMGYHEPSARDARQRIVTFFNRHLR
>NC_009767.1|WP_012120706.1|2841245_2841989_+|lysoplasmalogenase
MKPTQFRFLAYALLALAALVMLAGLATGNRGDARNRIPLPLRMLSSLLVWFAALLLWCSADPAVRRQAALAAAGMGCGFLGDLIMARVIPLPEHVISGMLTFGAGHGCYISATAGHLAQRGALKAASAPLLASWLIGAIGWYFVARNPAKSGVLNSAALAYALLLASTSGMGAALAMRDSRYLSLALGGALFFISDLILAGELFRDLFFPHIGDTIWLTYLTGQGLIVEALGTERARILPSTDAERE
>NC_009767.1|WP_012120707.1|2841906_2842773_-|sugar-phosphate-isomerase/epimerase
MTTDHVRLSAFGDEIADDLTEQLDMLQSEGIGAIEVRKVWGRNILDLAPDDLHRLRELLDARGFVVSAIGSPIGKSPITAPRSFEQERLERAIVAAEALGTRIIRIFSFHLPADKAHIYRDEVIERITALTKRAAASGILLVHENESGIYGDTAERCRDLLAAIGSPSLRAAFDPANFVQCRVHPMRDAWPLLADFVVHVHIKDALFADGSVRPAGEGDGDIPSLLAALRMRDYRGYLTIEPHLQAVDASGNLSRVEGMRVAIRALRRLMEESARVPFQALRRLAPGP
>NC_009767.1|WP_012120708.1|2842769_2843546_-|sugar-phosphate-isomerase/epimerase
MRFGVCISPDQIEAVAAAGFDFCELPARAVMPFDDDAAAAPALRAIAAAPIRPESFNVLVPAEIPLCGPHADLGVLRAYLRRAFSRMASLGAAIAVLGSGAARRIPDGWSRDQALDQLADAVALAGEEAGRYGITLALEHLNRRECNVFNTIGECATFIRERGLRDVRLLADLYHIEVEREPLDAVASAMPQVAHVHVAGGGRQSPDAPGYDYAGFMRILRNAGYDARISAECSWHNLAEQAPVTFAFMRTHWQGGRS
>NC_009767.1|WP_012120709.1|2843574_2844645_-|Gfo/Idh/MocA-family-oxidoreductase
MSSAEIRFGIIGAGVAGRYHAQAIVQTPGARLVAVCAGRPERAAALAEAFGASVEPNAEALLARNDIDAVCICTPSGQHAAQGIAAAHAGKHVLVEKPIAITLADADALIDACRAAGVHLGVALQRRTDPEFRAARDAIAAGALGRMVLGAITIPYLRTQAYYDSADWRGTWALDGGGALMNQGIHLLDLLLWLMDDDVVEVQAYTTTLARAIEVEDCVSAALRFAGGALGSIAATTAVAPGFPHRVEVYGTHGGLQIEGEAIVRWETADESTVSAPRIATGGAGRQEAGAGALPTGISALGHTRILHDFVAAIRDRRAPLVTGEEARRALSVALAVYESARTGRAARPKMGGRPA
>NC_009767.1|WP_012120710.1|2844641_2845769_-|Gfo/Idh/MocA-family-oxidoreductase
MTDHSNPPGLRFGIIGSAAGIAESHLKALTELPGATIVGMADIAIERGEARARAVGCPFFADHRAMLDAVRPDVAVICAPHPLHAALAIDCLDAGAHVLVEKPLAVSVSEADAMIAAADRAGRLLAVCFQQRFRPVIEHARTLIESGAIGDIVRVLCVEPWFRTQFYYDSAAWRGTWRGEGGGVLMNQGPHPLDLLCHLTGSPAKVWGWVRTMGHTIECEDVAQALLEYPNGAPGYIYFSTVEAGSERRMEIVGDCGALVIVFDNLTIHRFAVPLSEYRTTVREMWSQPQVQTETLRLPSDIGEHGGHLGVYLDLVRAIAEGRRPRCDAREARISLELSNAIIYSGMTGQPVTLPLDRQAYDALLDDLRAGRRKL
>NC_009767.1|WP_012120711.1|2845958_2848037_-|NAD(+)-synthase
MPAFNSIYTHGFIRAAVCIPSLRVATPEHNVARTLALAERASATNAAVALFPELGLSAYTCDDLFQQDALLEGVLNALERLVDASRALTPVLLVGAPLRIDSGLYNCAVVIYRGRILGIVPKSYIPNYREFYEKRQFSAARDAIRQTVRLAGDTVPFGADLIFTAENIPGFTLHVEICEDVWVPAPPSTFAALAGATILANLSASNITIGKADYRRMLCAAQSGVCLAAYLYSAAGPGESTTDLAWDGHALIYELGELLAESERFARDEQIITADIDIERIVQERIRTTSFADSSGDHRERLRAMRRIPFTFETPTGDVPLQRTIARFPYVPADPVRRDERCYEAYSIQVHGLMKRLVSTGIEKVVIGVSGGLDSTQALIVAARTMDRLDLPRTNILAYTMPGFATSETTLTNARNLMRALGVSAGEIDIRPSCMQMLRDIGHPFARGEPVYDVTFENVQAGDRASHLFRLANMHGALVVGTGDLSELALGWATYGVGDHMSHYNVNASAPKTLIQHLIRWVADSGQFDDATSAILRSILSTEISPELVPPDGADHSRPAQSTQAIIGPYELQDFNLFYITRYGFRPSKVAFLAWNAWSDATRGEWPPGLPGDDRRQYDLATIRRWLEVFLWRFFKISQFKRSALPNGPKIGSGGSLSPRGDWRAPSDAEADVWLDELRRNVPENLVGSCGS
>NC_009767.1|WP_012120712.1|2848098_2848425_-|hypothetical-protein
MTRRRHLQASLVYVIVDVAQRRGQTTLRLPGYGHAPMVYADLPPDDRGRLWIEPLHVWLGVQNQHVVCYGTTGVSIGDHPDLQAAPATAEQRIAALETKLWRLRGELP
>NC_009767.1|WP_012120713.1|2848948_2849431_-|Uma2-family-endonuclease
MSASAREAIVAPPDNPFPYGRRYVERTVPNGSITFEQAPLTLEDVLHPQEGDQVTHSNLHQHICVYLYTVLRRRLAGVTGAVVLYDVRIAWDDLALKAHRPDLAAIFGVREHKNWSAFDVAAEGVRPTVLIEITSPETRGIDLTVKFDEYDLAGVEFYYQ

Crispr_ID: NC_009767_53

• CRISPR_ID: NC_009767_53
• CRISPR_location: 2848475-2848842
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers

Consensus repeat of NC_009767_53

Consensus_repeat	Method
GGTCGCGCTAGACCCCTCGCTT	PILER-CR

spacers of NC_009767_53

>53.1|2848497|52|NC_009767|PILER-CR
CGCTCGGGGTGACAATTCTCTCCGATCTCTCACGATCCAACCAGATAGTTGA
>53.2|2848571|77|NC_009767|PILER-CR
ACGATTGAAGGCGCCGCCTTCGTGTCATTCCGAGCCCTTCGCTTCGCTCAGGGTAAACGCAGCGCGGAATCTGAGCG
>53.3|2848670|52|NC_009767|PILER-CR
CGCTCGGGGTGACAATTCTCTCCGATCTCTCACGATCCAACCAGATAGTTGA
>53.4|2848744|77|NC_009767|PILER-CR
ACGATTGAAGGCGCCGCCTTCGTGTCATTCCGAGCCCTTCGCTTCGCTCAGGGTAAACGCAGCGCGGAATCTGAGCG

CRISPR arrays and Neighbor proteins around NC_009767_53

CRISPR arrays

The CRISPR arrays of NC_009767_53

>merge|NC_009767|53|2848475-2848842|PILER-CR
GGTCGCGCTAGACCCCTCGCTTCGCTCGGGGTGACAATTCTCTCCGATCTCTCACGATCCAACCAGATAGTTGAGGTCGCGCTAGACCCCTCGCTTACGATTGAAGGCGCCGCCTTCGTGTCATTCCGAGCCCTTCGCTTCGCTCAGGGTAAACGCAGCGCGGAATCTGAGCGGGTCGCGCTAGACCCCTCGCTTCGCTCGGGGTGACAATTCTCTCCGATCTCTCACGATCCAACCAGATAGTTGAGGTCGCGCTAGACCCCTCGCTTACGATTGAAGGCGCCGCCTTCGTGTCATTCCGAGCCCTTCGCTTCGCTCAGGGTAAACGCAGCGCGGAATCTGAGCGGGTCGCGCTAGACCCCTCGCTT

>NC_009767|53|7|2848475-2848842|PILER-CR
GGTCGCGCTAGACCCCTCGCTT	CGCTCGGGGTGACAATTCTCTCCGATCTCTCACGATCCAACCAGATAGTTGA
GGTCGCGCTAGACCCCTCGCTT	ACGATTGAAGGCGCCGCCTTCGTGTCATTCCGAGCCCTTCGCTTCGCTCAGGGTAAACGCAGCGCGGAATCTGAGCG
GGTCGCGCTAGACCCCTCGCTT	CGCTCGGGGTGACAATTCTCTCCGATCTCTCACGATCCAACCAGATAGTTGA
GGTCGCGCTAGACCCCTCGCTT	ACGATTGAAGGCGCCGCCTTCGTGTCATTCCGAGCCCTTCGCTTCGCTCAGGGTAAACGCAGCGCGGAATCTGAGCG
GGTCGCGCTAGACCCCTCGCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120718.1|2855312_2855510_-|hypothetical-protein	unknown	unknown	gnl|CDD|234701
NC_009767.1|WP_012120716.1|2852689_2853955_-|glycosyltransferase	unknown	unknown	gnl|CDD|340830
NC_009767.1|WP_012120707.1|2841906_2842773_-|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|366542
NC_009767.1|WP_012120717.1|2854926_2855313_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	unknown	unknown	gnl|CDD|226180
NC_009767.1|WP_012120719.1|2856394_2857375_-|zinc-dependent-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|176645
NC_009767.1|WP_041330631.1|2821551_2837082_-|isopeptide-forming-domain-containing-fimbrial-protein	unknown	unknown	gnl|CDD|380149
NC_009767.1|WP_012120714.1|2849490_2850420_+|RluA-family-pseudouridine-synthase	unknown	unknown	gnl|CDD|223638
NC_009767.1|WP_012120712.1|2848098_2848425_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120708.1|2842769_2843546_-|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|366542
NC_009767.1|WP_157042625.1|2854225_2854507_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_083760304.1|2851837_2852542_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_083760305.1|2854595_2854694_+|DUF4926-domain-containing-protein	unknown	unknown	gnl|CDD|379816
NC_009767.1|WP_012120715.1|2850457_2851786_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NC_009767.1|WP_012120703.1|2820757_2821411_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012120710.1|2844641_2845769_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_049768826.1|2840285_2840999_-|dienelactone-hydrolase-family-protein	unknown	unknown	gnl|CDD|223489
NC_009767.1|WP_012120713.1|2848948_2849431_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012120706.1|2841245_2841989_+|lysoplasmalogenase	unknown	unknown	gnl|CDD|377946
NC_009767.1|WP_012120709.1|2843574_2844645_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_012120711.1|2845958_2848037_-|NAD(+)-synthase	unknown	unknown	gnl|CDD|235057

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120718.1|2855312_2855510_-|hypothetical-protein	gnl|CDD|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0.00779029
NC_009767.1|WP_012120719.1|2856394_2857375_-|zinc-dependent-alcohol-dehydrogenase-family-protein	gnl|CDD|176645	cd05282, ETR_like, 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain.	2.59447e-139
NC_009767.1|WP_012120714.1|2849490_2850420_+|RluA-family-pseudouridine-synthase	gnl|CDD|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.96796e-59
NC_009767.1|WP_012120717.1|2854926_2855313_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	gnl|CDD|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	4.56343e-36
NC_009767.1|WP_041330631.1|2821551_2837082_-|isopeptide-forming-domain-containing-fimbrial-protein	gnl|CDD|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	6.3979e-53
NC_009767.1|WP_012120707.1|2841906_2842773_-|sugar-phosphate-isomerase/epimerase	gnl|CDD|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	6.58247e-22
NC_009767.1|WP_012120708.1|2842769_2843546_-|sugar-phosphate-isomerase/epimerase	gnl|CDD|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	8.09852e-20
NC_009767.1|WP_012120716.1|2852689_2853955_-|glycosyltransferase	gnl|CDD|340830	cd03800, GT4_sucrose_synthase, sucrose-phosphate synthase and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.	7.10004e-130
NC_009767.1|WP_083760305.1|2854595_2854694_+|DUF4926-domain-containing-protein	gnl|CDD|379816	pfam16277, DUF4926, Domain of unknown function (DUF4926). This family consists of uncharacterized proteins around 70 residues in length and is mainly found in various Caulobacter, Microcystis and Cyanothece species. The function of this family is unknown.	5.33397e-08
NC_009767.1|WP_012120715.1|2850457_2851786_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	5.65433e-61
NC_009767.1|WP_012120703.1|2820757_2821411_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	5.86417e-17
NC_009767.1|WP_012120710.1|2844641_2845769_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.29446e-63
NC_009767.1|WP_049768826.1|2840285_2840999_-|dienelactone-hydrolase-family-protein	gnl|CDD|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	2.26318e-44
NC_009767.1|WP_012120713.1|2848948_2849431_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.52037e-11
NC_009767.1|WP_012120706.1|2841245_2841989_+|lysoplasmalogenase	gnl|CDD|377946	pfam07947, YhhN, YhhN family. The members of this family are similar to the hypothetical protein yhhN expressed by E. coli. Many are annotated as possible transmembrane proteins, and in fact they all have a high proportion of hydrophobic residues. A human member of this family, formerly known as TMEM86B, is a lysoplasmalogenase that catalyzes the hydrolysis of the vinyl ether bond of lysoplasmalogen. Putative conserved active site residues have been proposed for the YhhN family.	1.01969e-13
NC_009767.1|WP_012120709.1|2843574_2844645_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	4.91246e-72
NC_009767.1|WP_012120711.1|2845958_2848037_-|NAD(+)-synthase	gnl|CDD|235057	PRK02628, nadE, NAD synthetase; Reviewed.	0

Protein sequences

>NC_009767.1|WP_012120712.1|2848098_2848425_-|hypothetical-protein
MTRRRHLQASLVYVIVDVAQRRGQTTLRLPGYGHAPMVYADLPPDDRGRLWIEPLHVWLGVQNQHVVCYGTTGVSIGDHPDLQAAPATAEQRIAALETKLWRLRGELP
>NC_009767.1|WP_012120711.1|2845958_2848037_-|NAD(+)-synthase
MPAFNSIYTHGFIRAAVCIPSLRVATPEHNVARTLALAERASATNAAVALFPELGLSAYTCDDLFQQDALLEGVLNALERLVDASRALTPVLLVGAPLRIDSGLYNCAVVIYRGRILGIVPKSYIPNYREFYEKRQFSAARDAIRQTVRLAGDTVPFGADLIFTAENIPGFTLHVEICEDVWVPAPPSTFAALAGATILANLSASNITIGKADYRRMLCAAQSGVCLAAYLYSAAGPGESTTDLAWDGHALIYELGELLAESERFARDEQIITADIDIERIVQERIRTTSFADSSGDHRERLRAMRRIPFTFETPTGDVPLQRTIARFPYVPADPVRRDERCYEAYSIQVHGLMKRLVSTGIEKVVIGVSGGLDSTQALIVAARTMDRLDLPRTNILAYTMPGFATSETTLTNARNLMRALGVSAGEIDIRPSCMQMLRDIGHPFARGEPVYDVTFENVQAGDRASHLFRLANMHGALVVGTGDLSELALGWATYGVGDHMSHYNVNASAPKTLIQHLIRWVADSGQFDDATSAILRSILSTEISPELVPPDGADHSRPAQSTQAIIGPYELQDFNLFYITRYGFRPSKVAFLAWNAWSDATRGEWPPGLPGDDRRQYDLATIRRWLEVFLWRFFKISQFKRSALPNGPKIGSGGSLSPRGDWRAPSDAEADVWLDELRRNVPENLVGSCGS
>NC_009767.1|WP_012120710.1|2844641_2845769_-|Gfo/Idh/MocA-family-oxidoreductase
MTDHSNPPGLRFGIIGSAAGIAESHLKALTELPGATIVGMADIAIERGEARARAVGCPFFADHRAMLDAVRPDVAVICAPHPLHAALAIDCLDAGAHVLVEKPLAVSVSEADAMIAAADRAGRLLAVCFQQRFRPVIEHARTLIESGAIGDIVRVLCVEPWFRTQFYYDSAAWRGTWRGEGGGVLMNQGPHPLDLLCHLTGSPAKVWGWVRTMGHTIECEDVAQALLEYPNGAPGYIYFSTVEAGSERRMEIVGDCGALVIVFDNLTIHRFAVPLSEYRTTVREMWSQPQVQTETLRLPSDIGEHGGHLGVYLDLVRAIAEGRRPRCDAREARISLELSNAIIYSGMTGQPVTLPLDRQAYDALLDDLRAGRRKL
>NC_009767.1|WP_012120709.1|2843574_2844645_-|Gfo/Idh/MocA-family-oxidoreductase
MSSAEIRFGIIGAGVAGRYHAQAIVQTPGARLVAVCAGRPERAAALAEAFGASVEPNAEALLARNDIDAVCICTPSGQHAAQGIAAAHAGKHVLVEKPIAITLADADALIDACRAAGVHLGVALQRRTDPEFRAARDAIAAGALGRMVLGAITIPYLRTQAYYDSADWRGTWALDGGGALMNQGIHLLDLLLWLMDDDVVEVQAYTTTLARAIEVEDCVSAALRFAGGALGSIAATTAVAPGFPHRVEVYGTHGGLQIEGEAIVRWETADESTVSAPRIATGGAGRQEAGAGALPTGISALGHTRILHDFVAAIRDRRAPLVTGEEARRALSVALAVYESARTGRAARPKMGGRPA
>NC_009767.1|WP_012120708.1|2842769_2843546_-|sugar-phosphate-isomerase/epimerase
MRFGVCISPDQIEAVAAAGFDFCELPARAVMPFDDDAAAAPALRAIAAAPIRPESFNVLVPAEIPLCGPHADLGVLRAYLRRAFSRMASLGAAIAVLGSGAARRIPDGWSRDQALDQLADAVALAGEEAGRYGITLALEHLNRRECNVFNTIGECATFIRERGLRDVRLLADLYHIEVEREPLDAVASAMPQVAHVHVAGGGRQSPDAPGYDYAGFMRILRNAGYDARISAECSWHNLAEQAPVTFAFMRTHWQGGRS
>NC_009767.1|WP_012120707.1|2841906_2842773_-|sugar-phosphate-isomerase/epimerase
MTTDHVRLSAFGDEIADDLTEQLDMLQSEGIGAIEVRKVWGRNILDLAPDDLHRLRELLDARGFVVSAIGSPIGKSPITAPRSFEQERLERAIVAAEALGTRIIRIFSFHLPADKAHIYRDEVIERITALTKRAAASGILLVHENESGIYGDTAERCRDLLAAIGSPSLRAAFDPANFVQCRVHPMRDAWPLLADFVVHVHIKDALFADGSVRPAGEGDGDIPSLLAALRMRDYRGYLTIEPHLQAVDASGNLSRVEGMRVAIRALRRLMEESARVPFQALRRLAPGP
>NC_009767.1|WP_012120706.1|2841245_2841989_+|lysoplasmalogenase
MKPTQFRFLAYALLALAALVMLAGLATGNRGDARNRIPLPLRMLSSLLVWFAALLLWCSADPAVRRQAALAAAGMGCGFLGDLIMARVIPLPEHVISGMLTFGAGHGCYISATAGHLAQRGALKAASAPLLASWLIGAIGWYFVARNPAKSGVLNSAALAYALLLASTSGMGAALAMRDSRYLSLALGGALFFISDLILAGELFRDLFFPHIGDTIWLTYLTGQGLIVEALGTERARILPSTDAERE
>NC_009767.1|WP_049768826.1|2840285_2840999_-|dienelactone-hydrolase-family-protein
MADVVIHAPDGALHAYLATPDGTGPWPGVVVIHDALGMRSDTHRQADWLAGEGFLTAAPDLFDGGTVITCLRSIIRDYLTWQGMMFRHIAATRDWLAQRNDCTGRIGVIGFCMGGGFALLLAPGHGFAASSVNYGILPDDLERAVTGACPIVANYGAKDAMLRGAAGRLERALTALGIDHDVKEYPDAGHAFLNNHDPREVHALLRVAWHVTQMGYHEPSARDARQRIVTFFNRHLR
>NC_009767.1|WP_041330631.1|2821551_2837082_-|isopeptide-forming-domain-containing-fimbrial-protein
MRRRPTLRFAPLLTLLVGALTIGSFFLGTIALAAGNPLPVATVNSASGLIGEPVTLTVTFDNASTGTGDQTGYGPYIDLFLDTTGPDGAPSFDGLVTTDIRATYLNQPLPGLELITISGPTYVHPLTGQTLSVPGYGTRFQNGDTIAVLTLPFGSFTNTQPPAPIDVTLRISNLADLGTPLPVTAIAGFRYGADPLDNPGADPPIRQTTPSDADVTPILWRLTKTYLGPEDETATGRNYPRRYRLDVDIAEGQPVTNLQITDTLSNSMRITGNTAAQMSARLYNTPGVPTEVFNPANLSGTATPAAPGGTLVYTFGDKTGVRGVDASFEFEFYIPRDTSAATPTVPQGTDSTLANNTGSSSATWTPIDTRDAPTSITITLPPDAHTLQQHSLATQKSVTPVDRATLAPTGGVIIPGQTLLRYDIDFQVSDYFAVQNVYLEDIISDGQRLFVRTSGGPSTVPTLQVENAYVTGASPTRMNVATAPFGGANTIVYEQRFTTRSTPLSDPTSPPSGSVFVINTPAPSSSGTTYVRFNISQELIARGFSGRLVGGDIPNAGGAPQNNNPPLFGPTQGRITFYAEVKDEFSDDFPSGDRSVDQLDILRNTVPQIRGEQINTTTINNPTPTVIGQATDDTAASVELPIGDRSKTLYALNGQTTNLGDPVTVQPGDLVTYRLTYRLPISSFENIRLIDFPPLPVFPVPDRMFFDAAAAPGTIPGANMVTRGPSDTYLTTINPPTTVRVATTANITGYNPAGIGSFSGAPTTIDGVALANGDRVLVKDQTDARQNGVYVVVDATTGAWNRAADFDTPRELTNGPLVGVTAGATNANQHFRQSNQNFNTFNTDPITWAPFITTDAAGNSFTLNFGWHDDVDGGRRSSLIDVLVTLRVADAAFANDLFLTNQLRVSESSTNAGSKDFDEIVMFEVIRPNVTINKGIVGYNASGLTLGGVTFNPPDGPTTFTGAPVYTNTQALAIGASDSLVLTDAGDRVRYAIVLQNEARGDAYDVTVTDAIPSAYARPATLAAANFAVRRGDGTLLTGDVVSGTVRVATTAPLTGATFTTTPNNGQFTNAPRTIDGVTLNVGDRVLVKDQTSATQNGVYVVTAVFPGVNQATLTRADDFDDNTELTGGYRVAVLGGLSSNANRAFSATGPITLNTTPVTWSDAGISDYYATYNPLTGAFSVVLADNYTAGNTTAPTRDDRRGGLSRGASGPSSNIVGVTNGSNTIIITYDVTLGDNVEPNQQIINTATLTNVATSDGGIDDLPDPFDTALVTIRRPEIAKTLTATEIENATNARQQAVIGELVTYTLILTVPEGVMSNAALTDTLDVGLAFVDVTGVTASPSLSFVGGGLPTVGATPANTTIGAGGQTLVFNFGAITNSDRNNAADETIAITYRAVVLNTVANQSGAQRNNRADFSWDVPGQGSYALLPVETENVTIIEPTLAVGKTLPPGPYDAGDTIDYTITISHTAGSQTDAYDAVITDTLPIDPFGSGSLILTPAVLSVTDSASLLTTADFTLTGSDATSWTLSNPTPIDVAQGRTISIVVRGTLSNAAMPGATITNTAFLRWTSLDGNPGQRSTHAADSTERTGADGPGGALNDYAATGSATFVIPTVTPGKALVATSEAHTSDSNVTIGEIVRFRIAIGGPEASVYAFSLVDRLPPGLTFLNDGSARFAFIANSNITTAGVYDVAPVSCPAINPTGVATLADVLNPTILPSSSINCTFGDSNISSNETTNQDVYGSGTDVFFRFGNLSNNDNDADEEFIVVEFNAIVDNDTTDPNDAGDVRNNTVVARMNPPGFGAFETDPSAPTSVTVVEPNIAFNAATNNKTATPTSGDAFDLITYTVTFANATGAMVSDAFDARILDTLPADVTLIPASISVSSAGGCATGVTNASAGNTVDVTIGRVPPGCNVTITYQATLNVSVVPGQAITNTASLTYTSLPGNTGTGGFFGSTAGTSGSATGERNGSGGINDYAGSDTAMVTIVAPALAKRIVATSEAHTADPLVLADFNNAGFDGFLPGSVFTGGNNTWDDAPGNVTVFSTFVRIAGNSTERGGGFITFATPVDLSNHTALALSARLVAGNGANNIDIHLQDADGTNWRWRFPASNFTTSTFTLVPQNLLGPNSTTIAAGTTPGLDLRNIVRLEIRGDDGTAQFDIDIDAVIAFGNIAAPGEIVRYRLVTTIPEGTSPNLQLLDRIPTGMRFINDNTARVAFVSTNGITSTSAGAQVPALSGTGLNITGNQDSVVGLSLAVGSGNGLAIGEGTAFDGNVSSSNDVLTDTDTYNNGSDVFFRLGNIVNNDNDDDLEFIVIEFNAQVLNVFNVGNQSGVGLNNDFQYFRNGSQVGSTSAQNGINRITVVEPQINNLSKTLASAPPVDAGDVFTYTLRFANGVAWPTSPAVPVRVATTGNIAGFNATGGFGGTGQFANAPATVDGVTLNVGDRILVRSQTNAAENGIYTLVFIDPFTGARVWDRATDMDDTAELALGYRVFVQEGATLAGRTYYLDEPVPTINAGALNWREVAPAMTVAVATTGSLGGANFNSSGGLLGRGTLTTTATTIDGIPVNATNFPVGTRILVKNQSTAANGVYQVTGFTSPTLTLERVPEFDSHLEAVIGAQVYVTGGTINAGRTFAVQTAPSETPITTSTNFEIVDQVAAFDVTVFDQLPPTLELLGVQIDAPTGTTATNGSTLGVGGVISYTLDRLDSVQDITAGRNDVVITATVRVVTGTVASAQITNTARVQYTSLPGARGTLSNPTGSNVDAGTAGTQNGERTGQGVLNPTNNTPPSNNGIRNNYSVGAIALNHLAAPMFDKQFQGGSISDDDSSVPGTSGASVAVGEAVLYDLRVTLPEGTTNNLRVVDAVPDGMRFDTSFNGGLGYQIVTTAGGSLAENFSDPAAVASPTLSVSGTGTLGQDGVDALFSFGNVTIADDNNPNNNSFIIRVRLIATNTAANQSGASRDNGGALRYTNGYSGGDNELRDPTEPRVTIIEPTPSILKSVSGAAADAGDPITYTLRIENIALRSEMDAYDVVISDTIAPELINPTIVAVNVTGAPDVSAADFEIATVGPDRILRTTAPITLPLGATVTITFTGDLTSTVTTDQIITNRASMFWSSTPGTNPDERTGADVPNPPECSSLPGDCNLDSTQLNNYGLISSVTTTAIAPVVVSKSVVEGIAPSTPGTDVTIGEIVTYRLAVSLPEGVTSGLVITDTVPSGMAYLPGSATLITGTLATGDPPLAGGHPTDAGSLAFNGVFSDTTDPSVTPIGSGQFLNGTGIRFEFDQITLPGDNDARNNTFFIRYQVVVLDVAGNTGFSGSQKTLTNSGQFDVPSTPQPPTDLLIDPNGATVTVVEPELAIAKSVTPASGDAGDAVTYTITLSHTARSLADAFDVAISDALPATVGSSLTAPITIANVNATHSVDGDITGNFSVAGNTLTTTTPFTLPRGETVTLTITGVLRQSVQPGEVITNTAVLTSTSLPGPNQDLSPDATGVSDGTDRERSRSSSSSATHSVGQGAFSKAILSTSATHTSGTDVTIGEVISYTLIVDLPEGTIRDLTLTDDLPAGLDYEGVTVITDAAQSGGLLTQDFAGTVPSITVTGGAGSGDDVTFTFTGDVVVTGDNDAANNRFLVVARVRALNEPGMVGLIPPGQTILTNTATMRYTDGSNITRAFTDTETVRVVEPQLTITKDIVQMVANAGDPITITLTVTNIGASDAFDVVITDTLPPEFDADTTSFGTAGSDYPATFTPSRTGNQVRYEGGPIPVGATMTFTFRVNLTGTVTPGTTITNTARMAQSTSLPGDDPTERVQTPVESSDTLTIRSNSLSGFVYVDSDNDGVFDTGESGIGGVTITLSGTDHLGNSVLLTTTTTITGFYRFDNLYPGVYTLLETQPSGYLDGTDAIGTQGGATGNDVLSNIVLPVDTSTNGENNNFGEIPAARIAGFVYEDDNNDGVFDTGENGIGGVTVTLTGTDDLGNPVNLTTTTTITGFYAFDNLRPGTYTVSETQPSGYLDGLDTAGTLGGDTTVNDRIASIALPPGAASLNNNFGELRPASLSGLVYRDDNNNGSRDGSEPGISGVTITLTGTDDLGNPVNLTTTTTITGFYTFDNLRPGTYTVIETQPSGYFDGAETVGTAGGSILSNDVIGNITLNAGVAATGYDFGEVPAARIAGFVYEDDDNDGVFDTGENGIGGVTITLTGTDDLGNPVSLTTTTTITGFYAFDNLRPGTYTVSETQPSGYLDGRDTAGTLGGDTMINDRIAGITLPPGGASLNNNFGELRPASLSGLVYRDDNDNGVPDAGEPGISGVTITLTGTDDLGNSVLLTTTTTITGFYTFDNLRPGTYTVSETQPAAYNDGRDRVGTEGGDLSNDQVSTIVLGAGVDAANYDFGELGTFVSGVVWIDTNRDGTLDSGESGRLGGVTITLRDSLGNVVSTTTTLADGSYRFDNLPAGNYTIEQMQPTGYGSSTPNTLSVTVPLTGLTDQNFGETVSTLSGFVYVDSDNDGVFDTGESGIGGVTVTLLDGVGNVVSTTLTMADGSYRFENLLAGTYTISETQPLIYSDGQDSVGTIGGAPVGTLVSNDVIGDIVLPAGIDGITYNFGELANAGLGDRVWLDRNGDGVQDAGEPGIGGVTVYLDLNNNGSLNAGEPTVTTDADGRYFFGGLAGGTYTVRVDATTLPAGVSQTYDLDGATATPHTAIASLAAGATRTDVDFGYRGSASIGDRVWLDRNGDGAQDVGEPGIGGVTVYLDLNNNGARDPNEPFDATDASGNYLIDGLHAGTYTVRIDASTLPGGIDATYDLDGIGTPGMVTGVTLSDGQARIDVDFGYQGSASIGDRVWNDANANGIQEGGETGVSGIVVALYDSTGTLLITTTTDLNGNYLFDNLPAGTYTVGIGATPGRSISPRGAGSDPALDSDVDRTTRRSNLITLSTGEARRDLDIGLYQLASVGSLVWLDRDLDGIHEADEPGIGGIEVRLLRSDGTLVATRTTDANGYYMFTDVEPGEYRIAFSVPPGYYVSPPHRGSDRGNDSDADPATGQTPIFTLTPGQIDPTWYLGLSPISPTAIQLTRFSVERSANGIVIRWETAAEFQTRGFHIERSASGSRNDAARITDRLIPARGSIGSGAAYVWSDTTAAPGVRYTYWLVEETTDGSTHIYGPATSEATTGGTYTVVLPLIIR
>NC_009767.1|WP_012120703.1|2820757_2821411_+|Uma2-family-endonuclease
MSSTMTAAAPIVYPDSDGMPMADNTQQFRAIVTIQGNLEALFRDRADVFVAGDLLWYPVEGRPDIRRAPDAMVVFGRPKGDRGSYRQWEEEGIAPQVVFEVLSPGNTLTEMAAKFEFYDRYGVEEYYLYDPASGDLSGWRREGGRLRVIEEIDGWVSPRLGVRFRREGGEVRMYLPDGRPFLSFVEVQEQLDRERQRAERLAARLRALGIDPDADTL
>NC_009767.1|WP_012120713.1|2848948_2849431_-|Uma2-family-endonuclease
MSASAREAIVAPPDNPFPYGRRYVERTVPNGSITFEQAPLTLEDVLHPQEGDQVTHSNLHQHICVYLYTVLRRRLAGVTGAVVLYDVRIAWDDLALKAHRPDLAAIFGVREHKNWSAFDVAAEGVRPTVLIEITSPETRGIDLTVKFDEYDLAGVEFYYQ
>NC_009767.1|WP_012120714.1|2849490_2850420_+|RluA-family-pseudouridine-synthase
MLVTIPITDPGVSLRDALTAALGSEGEAAWLIARGGVWVNGRRVRDPDVRLPVDATVVVQRPPDGIYRDPVVTSAMILYEDADLIALDKPIDTYVEATPWDAEGHLRAALAHFLEVRDGSAPPLHLAHRLDRDTSGVLLLSKAPDVNAALQRAFREGAVRKTYLALCAGLPAFDEIEIETGHGRGRGGVFRVFPHEEIGRALPQGGTVKAMRTRLRVVRRMDDAALACATPLTGRTHQIRLHLAFLGHPLIGDVKYGGPSTWRGVVVQHHHLHAWRLELPHPRSGTALIIESPAPTWANLPDAKTLLAR
>NC_009767.1|WP_012120715.1|2850457_2851786_-|serine-hydrolase
MQPVYSQSRNRRRRRHHAQRAATPVWRAVAIAAGALLIVLGTCSAPFITRRMQQEAAPPPTPLPAAVAPAPTVAASATPRPTQIPQPSATPAPPPTPTLMAGAGPGAPPLSPLGREIDAYLSGLTSSGQFQGAVLVAQNGEVVIARGYGNADDNVPNTVQTRFRLASVTKQFTAAAILALQQDGKLTVDDAICAYLDPCPDAWKPLTIRHLLTHTSGLVDYTAFAGFEPTEMNPATPQELVERFRDFPLSFAPGTLYHYCNSNYVLLGLIIERVSGMEYADYLEQRFFVPLGMTNTGYDTSRGTIIDGAQGYVTPGRKSGFLDASTLYAAGGLYSTVGDLFRWDQALSTEEALTRTQLEQMFTPALRNYGFGWKIETIDGRRRISHPGNMTGVATFFARYPDDRATIIVLANMEYANAEGIANYVASRMFAPAATTTPPTTR
>NC_009767.1|WP_083760304.1|2851837_2852542_-|hypothetical-protein
MDHNPGATAPRNAPVEGEKFVLWKSQAASCPFVSFVDHNPGATAPRNAPVEGEKFVLWKSQAASCPFVSFVDHNPGATAPRNAPVEGEKFVLWKSQAASCPFVSFVDHNPGATAPRNAPVEGEKFVLWKSQAASCPFVSFVDHNPGATAPRNAPVEGEKFVLWKSQAASCPFVSFVDHNPGATAPRNAPVEGEKFVLWKSQAASCPFVSFVDHNPGATAPRNAPVEGEKVDGRL
>NC_009767.1|WP_012120716.1|2852689_2853955_-|glycosyltransferase
MRIAMLSVHSSPLARLGGKEAGGMNVYVRELSREFGRRGISVDIFTRAQERTAPAIVPIDQGVRLIHVRAGPSAPYDKNRLLDYLPEFIGRVRCFADSEDLHYDIIHSHYWVSGEAALALRRSWGAPVVHMFHTLGAMKNQVARGSEERETRQRVAVEGGILREADMIIAATPLDRAQMVWHYNADAEKIRVVPAGVDLRRFRPRDLVEARAALDLPPPPHRVVLLVARIEPLKGIDALIEAGALLLQRHPAWCGALTTLIVGGGGEEERAQWNAEQRRLDALRQRLDIADVVHFAGAQPQDRLPLYYAAADVVTMPSHYESFGMAALEALACGRPVIATNAGGPAFIVEDGVSGLLTPPADPVTLARHLERLLRDDAGRAAMGAAARERALRFGWEHVACDILSVYRDLLRQRSAWMRAG
>NC_009767.1|WP_157042625.1|2854225_2854507_-|hypothetical-protein
MPRPKPKYPIQLLENEEKELRQLVRSRKSRRGKVMRARSVLDAHDHPEWSNPFPSLPCEMLPLRGLFALLRASAPVFSTTESAMSSIHVAQNE
>NC_009767.1|WP_083760305.1|2854595_2854694_+|DUF4926-domain-containing-protein
MNDTPKLLDVVALLEDIPDHDFRRGQVGTVRE
>NC_009767.1|WP_012120717.1|2854926_2855313_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin
MRYLTLHEILEIYLRVMQQSGGLAGIRDLGALESAVAQPRMTFGGAELYPTVVEKAVSLGFSLIQNHPFVDGNKRTAHAAMETFLVLNRYEIRATVDEQESVILQVASGRMNRNEFVHWLNAHIEPRS
>NC_009767.1|WP_012120718.1|2855312_2855510_-|hypothetical-protein
MTTITIALSDDQLQKLQQIATLFRVTPEELVRVSVEELLSRPEEEFRKALEYVLQKNTELYQRLA
>NC_009767.1|WP_012120719.1|2856394_2857375_-|zinc-dependent-alcohol-dehydrogenase-family-protein
MRAVRFASFGEPADVLTIENIPAPQTGPGQVLVRVQVRPINPSDLFVIRGLYGILPRLPAVPGFEGAGVIVGVGEGVTDRTIGQTVIPMGAAGLWQEYVVVPAARTIPVPATIGDRQAATALINPATAWLMLTDTLRVEPGEWVLQNAANSIVGRHVIRLAQRLGFRTINVVRRREVMDDLRTLGADDIICEQDENVVARVHALTGGKGVRYALDSVGGASGARLAASLAMGGTMLVYGAIAGEPLTIHLGTLLFRSATIRGWWLSHWLQTATPEQAQDLFTTLFGLIADGTLHTPVAAEYDLGDVREAVIAAEHKTRPGKVLLVG

Crispr_ID: NC_009767_54

• CRISPR_ID: NC_009767_54
• CRISPR_location: 2918986-2919303
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers

Consensus repeat of NC_009767_54

Consensus_repeat	Method
CCTCTCGCCTCTCCCCTCTCACCCCGCGCCTCTCGCCTCTCCCCT	CRT

spacers of NC_009767_54

>54.1|2919031|39|NC_009767|CRT
CTCACCCCGCGCCTCTCGCCTCTCCCCTCTCACCCCGCG
>54.2|2919115|18|NC_009767|CRT
CTCACCCCGCGCCTTGTC
>54.3|2919178|18|NC_009767|CRT
CTCCCCTCTCACCCCGCG
>54.4|2919241|18|NC_009767|CRT
CTCACCCCGCGCCTTGTC

CRISPR arrays and Neighbor proteins around NC_009767_54

CRISPR arrays

The CRISPR arrays of NC_009767_54

>merge|NC_009767|54|2918986-2919303|CRT
CGTCAAGCGTCATTGGTATCACCCCGCGCCTCTCGCCTCTCCCCTCTCACCCCGCGCCTCTCGCCTCTCCCCTCTCACCCCGCGCCTCTCGCCTCTCCCCTCTCACCCCGCGCCTCTCGCCTCTCCCCTCTCACCCCGCGCCTTGTCCCTCTCGCCTCTCCCCTCTCACCCCGCGCCTTGTCCCTCTCGCCTCTCCCCTCTCACCCCGCGCCTCTCGCCTCTCCCCTCTCACCCCGCGCCTCTCGCCTCTCCCCTCTCACCCCGCGCCTTGTCCCTCTCGCCTCTCCCCTCTCACCCCGCGCCTCTCGCCTCTCCCCT

>NC_009767|54|8|2918986-2919303|CRT
CGTCAAGCGTCATTGGTATCACCCCGCGCCTCTCGCCTCTCCCCT	CTCACCCCGCGCCTCTCGCCTCTCCCCTCTCACCCCGCG
CCTCTCGCCTCTCCCCTCTCACCCCGCGCCTCTCGCCTCTCCCCT	CTCACCCCGCGCCTTGTC
CCTCTCGCCTCTCCCCTCTCACCCCGCGCCTTGTCCCTCTCGCCT	CTCCCCTCTCACCCCGCG
CCTCTCGCCTCTCCCCTCTCACCCCGCGCCTCTCGCCTCTCCCCT	CTCACCCCGCGCCTTGTC
CCTCTCGCCTCTCCCCTCTCACCCCGCGCCTCTCGCCTCTCCCCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120768.1|2912253_2913546_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012120775.1|2920902_2921166_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042821.1|2919455_2920541_-|hypothetical-protein	unknown	unknown	gnl|CDD|274833
NC_009767.1|WP_049768829.1|2907717_2908563_+|polyphosphate-kinase-2-family-protein	unknown	unknown	gnl|CDD|274737
NC_009767.1|WP_012120765.1|2909353_2910118_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009767.1|WP_012120770.1|2914949_2915231_+|DUF4212-domain-containing-protein	unknown	unknown	gnl|CDD|379403
NC_009767.1|WP_157042631.1|2926402_2927059_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_085979102.1|2933224_2934571_-|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224172
NC_009767.1|WP_012120771.1|2915249_2917418_+|cation-acetate-symporter	unknown	unknown	gnl|CDD|274698
NC_009767.1|WP_012120767.1|2911207_2912254_+|hypothetical-protein	unknown	unknown	gnl|CDD|223893
NC_009767.1|WP_012120777.1|2924203_2925037_-|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NC_009767.1|WP_012120772.1|2917623_2918826_+|cation:proton-antiporter	unknown	unknown	gnl|CDD|223551
NC_009767.1|WP_012120782.1|2931959_2932649_-|hypothetical-protein	unknown	unknown	gnl|CDD|237874
NC_009767.1|WP_157042630.1|2921419_2924005_-|helicase	unknown	unknown	gnl|CDD|274800
NC_009767.1|WP_041331968.1|2908652_2909375_+|septum-formation-protein-Maf	unknown	unknown	gnl|CDD|376812
NC_009767.1|WP_012120778.1|2925104_2925800_-|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NC_009767.1|WP_157042629.1|2910101_2911205_+|YegS/Rv2252/BmrU-family-lipid-kinase	unknown	unknown	gnl|CDD|224513
NC_009767.1|WP_012120769.1|2913975_2914578_+|hypothetical-protein	unknown	unknown	gnl|CDD|223021
NC_009767.1|WP_012120781.1|2927859_2931207_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173795
NC_009767.1|WP_012120774.1|2920642_2920906_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120768.1|2912253_2913546_+|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	6.78252e-61
NC_009767.1|WP_012120782.1|2931959_2932649_-|hypothetical-protein	gnl|CDD|237874	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau.	5.02679e-06
NC_009767.1|WP_157042821.1|2919455_2920541_-|hypothetical-protein	gnl|CDD|274833	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated. A phylogenetic tree of the DUF2342 family (TIGR03624) consists of two major branches. One of these branches, modeled here, is observed almost entirely to be found in coenzyme F420 biosynthesizing species of the Actinobacterial, Chloroflexi and Archaeal lineages. The few organisms having genes within this family and lacking F420 biosynthesis may either have an undiscovered F420 transporter, or may represent F420-to-FMN revertants. This family includes a Chloroflexus Aurantiacus protein whose crystal structure has been determined (PDB:3CMN_A). This has been annotated as a putative hydrolase, but the support for that assertion is untraceable. There is no cofactor present in the structure.	4.50638e-163
NC_009767.1|WP_049768829.1|2907717_2908563_+|polyphosphate-kinase-2-family-protein	gnl|CDD|274737	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which. [Central intermediary metabolism, Phosphorus compounds].	3.13158e-141
NC_009767.1|WP_012120765.1|2909353_2910118_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	6.71191e-70
NC_009767.1|WP_012120770.1|2914949_2915231_+|DUF4212-domain-containing-protein	gnl|CDD|379403	pfam13937, DUF4212, Domain of unknown function (DUF4212). This family includes several putative integral membrane proteins.	1.17054e-29
NC_009767.1|WP_085979102.1|2933224_2934571_-|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	4.21622e-137
NC_009767.1|WP_012120771.1|2915249_2917418_+|cation-acetate-symporter	gnl|CDD|274698	TIGR03648, Na_symport_lg, probable sodium:solute symporter, VC_2705 subfamily. This family belongs to a larger family of transporters of the sodium:solute symporter superfamily, TC 2.A.21. Members of this strictly bacterial protein subfamily are found almost invariably immediately downstream from a member of family TIGR03647. Occasionally, the two genes are fused.	0
NC_009767.1|WP_012120767.1|2911207_2912254_+|hypothetical-protein	gnl|CDD|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	2.09971e-19
NC_009767.1|WP_012120777.1|2924203_2925037_-|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	7.32203e-11
NC_009767.1|WP_012120772.1|2917623_2918826_+|cation:proton-antiporter	gnl|CDD|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	7.73607e-59
NC_009767.1|WP_157042630.1|2921419_2924005_-|helicase	gnl|CDD|274800	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase. A conserved gene neighborhood widely spread in the Actinobacteria contains this uncharacterized DEAH-box family helicase encoded convergently towards an operon of genes for protein homologous to type II secretion and pilus formation proteins. The context suggests that this helicase may play a role in conjugal transfer of DNA.	1.79484e-29
NC_009767.1|WP_041331968.1|2908652_2909375_+|septum-formation-protein-Maf	gnl|CDD|376812	pfam02545, Maf, Maf-like protein. Maf is a putative inhibitor of septum formation in eukaryotes, bacteria, and archaea.	1.98623e-75
NC_009767.1|WP_012120778.1|2925104_2925800_-|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	7.17731e-09
NC_009767.1|WP_157042629.1|2910101_2911205_+|YegS/Rv2252/BmrU-family-lipid-kinase	gnl|CDD|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	2.98735e-75
NC_009767.1|WP_012120769.1|2913975_2914578_+|hypothetical-protein	gnl|CDD|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.0043592
NC_009767.1|WP_012120781.1|2927859_2931207_+|S8-family-serine-peptidase	gnl|CDD|173795	cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	3.15044e-92

Protein sequences

>NC_009767.1|WP_012120772.1|2917623_2918826_+|cation:proton-antiporter
MEEHHSPVELLPMLAAILIGAKLAGRLSQRLGLPAVFGELVLGLVLGPSLLNLIRPNDPLALLAEVGVILLMFRAGLETDLVQMRQVGLAATMVALGGVLLPFGGGFALGRLFGLDMLPSLFVGAVLTATSVSISAEVLRELGHLRSKVGATILGAAVIDDVLGVLVLSLVLGLAGEGNPLVAIGQMAIFFPAAWLVGDKLLPQLRKIEHLAGGQDTVLAILLGLVMLFAWAAEALGSVADITGAYLLGIVVARYTDEEHVVHHGSSALAYAFVVPVFFVNIGLEANVTTLGAMPLFTIIMVALAIAGKVVGCGVGAMAMRLSWREAVQIGVGMVARGEVALVMIAAGRAAGLVNDVLFTSTIVMALLTTLITPPLLRLAFAHPKPPPAGERSAVIEAAE
>NC_009767.1|WP_012120771.1|2915249_2917418_+|cation-acetate-symporter
MAVNEAVKLRNNRLAQYYGMFTVGLIVFSLIMGALELGAGMPKAWIGWTFLMLTMGMYAFIGIMSRTKILDEYYVAGRNVPAVFNGMATGADWMSAASFISMAGTLYALGYDGLAYIMGWTGGYVLLALLFAPYIRKFGQYTIPDFVGARYGGRWPRLVAAICAIIVSLTYVTAQVVGVGIIMSRFIGVPYEWGVVIGLSGVLVCSFLGGMKAVTWTQVAQYIILIIAYMIPVTFLSLKLTGFPFPQLSYGQALQNITVLEKELKISSEAPARDGTGRIIQQGYVPAYNEGLSNAAAVTAINQINSYFGLNITPPKAQSIPDASKPADEIQTDWRGTPWNFLALTFCLMVGTAGLPHILIRFYTVPSVRESRLSVGWALFFIFLLYFTAPAYAAFARWEILQNVVGKEIKSLPEWTVNWSRLGLITQRDYTTLDGREIDKLPAWAAPQVRSGALVITDANGNGKIDLAGATFSETEVDGKKVGVFGELSGTAVTKTSTDGILQFGELNIDPDTIVLSTPEIAGLPYTVAALIAAGGLAAALSTADGLLVVISSAIAHDFYYRIINPKASMNTRIWLGKTMLVVAAVIAALLALPRLALIAQMVAWAFSMAASSFFPVVLLGIFWKRCNGPGAIAGMVGGLSVTLFYMYNNYLDPSFNVLGITHLAAGIFGMPINFLLCYIVSKLTAAPSQEIQDLVDHLRSPELDDELMTSIASGKQAAGAR
>NC_009767.1|WP_012120770.1|2914949_2915231_+|DUF4212-domain-containing-protein
MSDIETMSRQERINAYWKENNRLIAILLIIWFSVAYIPPLFVNQLNQISIAGFPLGYYFGSQFSLVVFVILIFYYAYAMNKLDAKYHLKDRDK
>NC_009767.1|WP_012120769.1|2913975_2914578_+|hypothetical-protein
MVTGNWWHRVSAARPARRRRRPAPRRSRQPLAAQVARRHRLADERARSPIRSAALPPHDHRNTHAFPTTEPAGTAPQPEPLINAIPLPPAIAPDSAHLALTALRVAGRLVPLLLLALATRIDTHDATRVLGDQSAHALAAWLEAWGRRPVVQFFRASGDHIFDATILQYLLADALTAALASDTTLAHEAARLLRPAEAHS
>NC_009767.1|WP_012120768.1|2912253_2913546_+|glycosyltransferase-family-4-protein
MRILHVVQLYHPVASGASRYFREIGERLAAEGHRVTVLATDACDLEHIWMPGRRRIETPVETFNGVQIVRLPIRRRPGPPILYPALRRLMTEISRLPGAAPLLRRLALWTPQWPGVEAFFAQYGPFDLVHATNITLDFAILPAYAYAQQRGIPFICTPFMHLGEPGSRAIVRYYSMRHQIDVLRQSDRVMVMTGVERDFLAARGVPRERLRVVGVGVTPEEIQGGDGARFRADHRVDGPLVLFIGALAYDKGALHLIEAMQRLWRDGHAATLALIGAPLAHFDAFYARLPAADRMRIRLLPYAPDAVKRDALAAADVFALPSRTDSFGIVFLEAWCYGVPVIGARAGGIPDVITDGQDGLLVRFGDVAGLAQAIRLLIGDRALAQRLGTAGRAKTLRDLTWERVYARARAVYAEVGGANTTGCCATFGGA
>NC_009767.1|WP_012120767.1|2911207_2912254_+|hypothetical-protein
MRCVLIGLCVVFLIACASPAPDATPTSVAPAPVAPPFAPPGVSQPTMIAAGARLPGRLLFARDGNVWLWQDQAGRLLTGAGAASHPAWSPDGARIVFVQRDQSFSDLMALPLDGGAPLRLTDNGSNQPRNSFERIRESIWAFYPSFAPDGQTIAFASQYAPPSGAPAAEYHLALFSMPAQAGGARRLIYADDAGHVGRVTHAPDGSAIVFVLEPATTGGVSQILRYDRATGAVTPQPGIPPQSYDPAFSPDGRWLAFAGRDGDRTDIFAIPTAGGTIVRLTSIGTARAPAFSPDGRMIAFLAVAPAEIGFDLWVADLRMIGDSLQASTPRQVSIGLRADADSGLSWGK
>NC_009767.1|WP_157042629.1|2910101_2911205_+|YegS/Rv2252/BmrU-family-lipid-kinase
MMRMSDRTVVPPYAPSLTDERETLPQEARALIVLNPFAGQAAALRQNVAAARDVWLAHGWTVDVETTRLAGDGARLAREAALHGYDVVVAAGGDGTINEVVNGLAGTRAALAALPVGTVNVWVRELGLPLEPRAAAEALLQARRRRIDLGRAGDRYFLLMAGIGFDAAVVNEVRSEEKRRLGALAYVVRAFDLALRYRGRRARITLDGRVIRGRVLLVVIGNSQLYGGVFKITARACIDDGLLDVCIIKGDSLAEAPLRLLSILRQRYNLDPRIEYHRARTIRIATRGALPVQVDGDQSGFTPMTFTVAPGALYALLPHTPPADDLLRAAPPRRRRVWQRMIGWMVRRAVLPDEAGRRGAPAASHQV
>NC_009767.1|WP_012120765.1|2909353_2910118_+|response-regulator-transcription-factor
MSANPAVKLLIVDDHPLFRQGVRAALSICRDIVVVGEASSGEDALEWMNAAPPNLEPNAVVVDLNLPGMNGLELTRQLRLNYPGVGIVVLSVYESDEQAFNALRAGASAYRSKDVHPDELADVLRRVARGEYVINDVVLDDPKVAGRVLSQFRNLPQDVTSLQEMEFPLFTPLSDREIEVLERIAAGGSNREIAEALHISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIEAPGAIRSEPPSSDVEDDEDE
>NC_009767.1|WP_041331968.1|2908652_2909375_+|septum-formation-protein-Maf
MNSTVTDEPSVPLALASASPRRRELLAYLGVPFRIIATDAEEHDHLPPPAIVAALPPLALPLFDHPTLRAWRKAHAACASAPDSVIIGADTIVALEGDVLNKPVDPDDARRMLRRLSGKTHTVYTGLAVIDARRTDALPLFDLVASQVTIDTLSDADIAAYVATGEPLDKAGAYGIQDLGGRLVRSVVGSYTCVVGLPLVATWRLLRAAGMTGLRDPAEGYRRWLRDRGKEIPPCPPTLP
>NC_009767.1|WP_049768829.1|2907717_2908563_+|polyphosphate-kinase-2-family-protein
MRVRLHDIDPDANGGLNKDEGRARFAELNAELDVMQEELYAAGIHALLLILQGMDTAGKDGAIRNVMLNLNPQGCRVESFKVPTEEELAHDFLWRVHRVVPRKGMVGVFNRSHYEDVLVVRVHSLVPESVWRARYDQINAFERLLADTGTIIVKCFLHISKEEQEQRLLARERDVSKAWKLSAGDWRERAFWDDYMAAYEEALTRCSTDYAPWYIIPANRKWYRDLAISEALVETLRPYRDDWRRALDAMSRARRAELEAFRAEQHAMEGRPQGAGGVSRR
>NC_009767.1|WP_157042821.1|2919455_2920541_-|hypothetical-protein
MNRAASGMPRPRMIDWLQARNIGVAVSQSYLAPVVDRAARQEQYRRMVQRSEPLISAYMGVRLPQPIDRIYVFDRAEWIEANLAAFQSLFAPLEELYDEVSARQGMVGILIGQLNSQLIGMQVGALIGFLARRVLGQYDLGLLSPDPDLRGALYFVEPNIARICAQLGLNGDDFRMWIALHETTHVFEFEAFPWVRAYFQDLLRQFIGRVNDQAAMLSVGIVRLIERLLQGQPIDHHWIELMLTPEQREIFTRMQALMSVVEGYSNHIMNAIGAQLLPSYPSIEARVRQRQLRRPLIEEAFNRITGMDLKLAQYQQGEAFINAVVAACGADFANRIWERPENLPTMDEIRAPHRWIARMSG
>NC_009767.1|WP_012120774.1|2920642_2920906_-|hypothetical-protein
MKLFRGLEKTDYQDVLRAIGLYIDEHGYTDVRIIEIEDGLVLQGRVREKKEIGTSSYETFLITDDDLKEMVRTAAERRGQKPPSFTQ
>NC_009767.1|WP_012120775.1|2920902_2921166_-|hypothetical-protein
MQHERIDYPELLRSLGQFIQQQHLNEVAILEFDRGWIISGVTYQSTAQGFIRVVADFVLSHEELRYIIQQMRDQRKTEPPHKGRWLG
>NC_009767.1|WP_157042630.1|2921419_2924005_-|helicase
MQSISDIIQAIARQRGRGDSTPLIMLRTLDDMPGERISHLPIDPQLVQVWLAYTGEPFRPHQAHALAALRRGEPVALRAVSGDIGATLHLLARAALAEAHGATTLMLAFDDSHARALYAAFDDANQSLPRPLQVPATSTTALRVNPFARMVIATPEALHDRVLRHHQRAWSAFWNGLRLIVLPDVHRFTGVAGAHLADLLMRAYRVAAAHGAAPGFLASLMRLNDPAPALHALLGRSWRVIDADDGPRPATVAAIWQGGGAWLRETIELVTQWRRQSYRVHVLCDALVRVALAAAIGDSADVTVGSDLQPAQVLVCAGFPGSISAFRRLLASGYQAVIVVLGELPQEQALARQVSVVLDGPLTAWVPPPANVYVLAQHVACAASELPLTAADVDAWGCAEIVARMAAHQQLIELPGDESIWIPAGEYDPYAEFSVLAASGGAITARSEQPRIRECLDPTLFERWAFAGAALPPGVGGLRVVMRDEEEGSISLRLETSGRRTYPLRRGQVVIRDLHEERAMTQDQRMLWGRVVAHETIYGWRELSPGASPVDTALNAPHESRWIAPACWFELPVAIQVQGQFVGWCLTAAVALRALASFTDLVPFYDHERRRLFFVDAQPGGNGLAQWLYQNAEDVLPIAYDVALACRADPLLEPLSRVEQDWLLALLGRAPVETPRRNASPAPSPPDPQSERRRTVGSSCDPQLSATRRDRRQPFPSPEPPLAPRAEPAQPAPDERKSMQRIAPSAPETTEPSQPNAVQNDERSEAPDAAALIERLRRQREQRERVKGRVTRATSARETEVQPRFVPGDRIFCLPYGDGEVLDSRIEDDREMLTVRFPDYGELVIDPALSLVRKLEPPREN
>NC_009767.1|WP_012120777.1|2924203_2925037_-|hypothetical-protein
MNPLPSQRPSIQLILAALAFLTGVIILIARFGGSLSAPQSTVMRATEALPLTTPSATPSLTSTATPTVAPTAPAATPTAAPAATPTAAPTATPTAAPAATPAVALTAAPTILLSTATPTASLVPSSPSPTPAATTALPTPTATPTPPTPTATFTAIPAQLTATPTTTPTVVAVTVTAMPSPTPGVRTLTLLVDGTQPQVEISYEIGDTEVVVGNAIVPPWFKTIEVAFDFDVRLIAAGTAEFGDVRCQITGDAVPTPGIVDYDSNPYPSVECVVVGQ
>NC_009767.1|WP_012120778.1|2925104_2925800_-|hypothetical-protein
MRFLLLTGGLILMLAACGAPTATRGDTSVPPAGEPLLPSAAPLPTGEPGQNLIAEPSASPAAETPAAAPSVVDAAPETAATPAAPPPTPPSTATMAPVPSPAPQSMVTAAPTVSLPAPPPQVTALTLPTPEAQPPPVNIGEQAILPADLLARLIGDLSVRSGSDPSTITLIGAEAVIWNDGSLGCPQPGMIYPQVQIEGYRVVLRVGDRDYDYRIGKGGSFVLCERSTRQP
>NC_009767.1|WP_157042631.1|2926402_2927059_-|hypothetical-protein
MTASPGAGQQAPPMDLRYVGVATYGVPPTFCTSSLLIRFAINTHQRITHSNYPVEFDLLFDTNRDGTPDYIGFTSEVGTFASSGQNAFFVGPPAGPFRAFFFTEHPTNSANTIVTICGEQIGVTSPGQQINVDAYVYDNYFTGNELSSIDGMSTVIGAPRYVDSFYLSPLGFGTAPGGGSTSLRIFTTGSTATTTESGILLMFSYGPSGNEARAIKVR
>NC_009767.1|WP_012120781.1|2927859_2931207_+|S8-family-serine-peptidase
MKRYTTRLSLAAMTLLLSLILAALSPLRAVEAQTRPNRPTPGTPLTIEPATVTNREDLAVNKNMAVSRDGSMASVFLKIDSPSLATFMAQNGITDMNALAAQNYLRQLNAELDALVARAKQLVPGLSVTHRFDLIIGGVAVVAPVGEIDKLRRLPNVVDVINDRIEKIETYRTPAFIGATTAWGRGGGSAFAGEGVIFGVLDSGVWPEHPSFSDPDPLGKPYAPPPPAPGNPGGVRACDFGSATPGDAPFACNNKLIGSYRFMTAYDFFVGTEPYEFRSGRDDDGHGTHTASTAAGNRGVAASDGSRVFGVISGIAPRAYVVNYKVCGELGCFSTDSAAAVQQAIRDGVHVINFSISGGTNPYSDIASLAFLDAYNAGVLVSASAGNSGPAADTVNHREPWVATVGASTSDRSYLSTLTVQGSSGTFTAVGASSGAGIATPTQIVVNNADPLCLNPAAPGSFTGQIVVCQRGVIARVAKSANVAAGGAVGMILYNPSPSSLDADFHVIPTVHIQNTDGTALLAFLTANPGATATFTAGAPGSIQGDVMAGFSSRGGPGQTLGISKPDVTAPGVNILAGYTAIEYGTPVPQFAFLSGTSMSSPHNAGAAILLKWLHPTWTPGQIKSALMTTAKAAGVFKEDGVTPFTPFDAGSGRINLRKAWDPGLTFDETGANYVTLQNELWKANYPSLYVPKMPGLITVSRTAREVSGYDSFYKSTVSYQAGQPRDFTVTAPKEFFVPANGTYTFDITVDARNVPVGQVRHAVVIFTERNGCQVRFPITIVRGEPDIRMEKRCNPATLALRGTTDCTITISNTTFSNASVTLNDTMPRQLKLVSGSVTGGATEMGNGLTYSGTLTGAAPPDVSAGRLTFNGYLSLASLGASPNVSLGDESLVNLTLSRPFLFGGQSYNTVAMVSNGYAVVGGGTAADISFVNRTFPNSARPNNTLGAFWTDLDGSAGGNYYAYLVGFGPCSNPANACWLILEWENAPNWSDSQVNTFQIWIGLNGVEDITYSYGPVLSSGDGGFVTVGAENAFGNRGANIYSNDGFGPVIGTIPTAGSNDVYIATTPGAPGQTVTIGFRAQGVRVGRWTNYAELTSPAFFGTYIKSFSGEVVRP
>NC_009767.1|WP_012120782.1|2931959_2932649_-|hypothetical-protein
MRAMIATLLGCALLLAACGSASTGALPAEPTQPSNSAPSQPTQPPLPTGVPGQPLIADTPVRQPTATAASVAPSSTNGDPRIPTATSMFTPVPVAEQGKETPMPTPDQANEPMRPAPPYNVQPLTPPFGAAMDAQIDAAKQDLTQRLGIDASAIEVVEVDAVTWPDTSLGCPKPGMMYPQVLVDGVLVQLRANGQIYRYHGDGQRRLFLCDALAGPLGDQPGRPPRGDP
>NC_009767.1|WP_085979102.1|2933224_2934571_-|NAD(P)/FAD-dependent-oxidoreductase
MRRLRRRGRRSGWRRRNRRRRCDECGIDRRLRLLKAKRLITDLDEIAVALINRTNYHGFWPLLYQVATAGLEPESIAYPVRAILRRYRNANFLLAEVNGVDFEQHTVLTDVGSVSYDYLVLAAGSTTNFFGNERFERYTLGMKDLDEAQRLRNHILHCFERAASERDPAHRAALLTFVVVGGGPTGVELAGAFVELIRHVMRKDYPMLDVHQAHVALIEATDRVLATFPESLQRAALDRLRRMGVDVRLNTPVADARPGVLAFKDGSELAAETIVWAAGVRASPLAEALGVTLGRGARVKVEPTLTLPGHPNVFVVGDMAYLEGYRPGVPYPMVAPVAVQMGEQAARNIIARTRRNPMKPFRYFDKGQMATIGRSAAVLDSFGIRLTGWPAWVGWLFVHLMELVGFRNRALVLLNWAYSYFTYDRGVRLIFGVGAEERLKVERLKVER

Crispr_ID: NC_009767_55

• CRISPR_ID: NC_009767_55
• CRISPR_location: 2986642-2986753
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csa3

Consensus repeat of NC_009767_55

Consensus_repeat	Method
AACACCGACCCCTCACGTCGCGCGCCTACGGTTGCAAC	CRISPRCasFinder

spacers of NC_009767_55

>55.1|2986680|36|NC_009767|CRISPRCasFinder
TTCGCAAGGGCATGGCCGAGATGCGCCGCAATGAGA

CRISPR arrays and Neighbor proteins around NC_009767_55

CRISPR arrays

The CRISPR arrays of NC_009767_55

>merge|NC_009767|55|2986642-2986753|CRISPRCasFinder
AACACCGACCCCTCACGTCGCGCGCCTACGGTTGCAACTTCGCAAGGGCATGGCCGAGATGCGCCGCAATGAGAAACACCGACCCCTCACGCCGCGCGCCTACGGTTGCAAC

>NC_009767|55|46|2986642-2986753|CRISPRCasFinder
AACACCGACCCCTCACGTCGCGCGCCTACGGTTGCAAC	TTCGCAAGGGCATGGCCGAGATGCGCCGCAATGAGA
AACACCGACCCCTCACGCCGCGCGCCTACGGTTGCAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120815.1|2976529_2978377_+|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	unknown	unknown	gnl|CDD|274738
NC_009767.1|WP_012120817.1|2979826_2980192_+|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|197713
NC_009767.1|WP_012120825.1|2988882_2989398_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120834.1|3000322_3004528_+|alpha-amylase	unknown	unknown	gnl|CDD|200477
NC_009767.1|WP_012120832.1|2996344_2997277_+|hypothetical-protein	unknown	unknown	gnl|CDD|276809
NC_009767.1|WP_012120831.1|2995567_2996209_-|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|366010
NC_009767.1|WP_012120829.1|2992990_2994235_+|CBS-domain-containing-protein	unknown	unknown	gnl|CDD|376875
NC_009767.1|WP_012120833.1|2997319_2999758_-|peptidase-C1	unknown	unknown	gnl|CDD|239068
NC_009767.1|WP_012120814.1|2975560_2976274_+|hypothetical-protein	unknown	unknown	gnl|CDD|226755
NC_009767.1|WP_012120830.1|2994259_2995309_-|polyprenyl-synthetase-family-protein	unknown	unknown	gnl|CDD|223220
NC_009767.1|WP_085979078.1|2980404_2980953_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224167
NC_009767.1|WP_012120816.1|2978671_2979718_+|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	unknown	unknown	gnl|CDD|235604
NC_009767.1|WP_012120826.1|2989534_2990473_-|UV-damage-repair-endonuclease	unknown	unknown	gnl|CDD|235029
NC_009767.1|WP_012120819.1|2980903_2981734_+|arsenite-methyltransferase	unknown	unknown	gnl|CDD|237007
NC_009767.1|WP_012120821.1|2983184_2984195_-|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|169599
NC_009767.1|WP_012120828.1|2992107_2992665_-|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|379873
NC_009767.1|WP_157042824.1|2984224_2984998_-|protein-tyrosine-phosphatase	unknown	unknown	gnl|CDD|319973
NC_009767.1|WP_012120823.1|2985018_2985786_-|metalloregulator-ArsR/SmtB-family-transcription-factor	unknown	unknown	gnl|CDD|319973
NC_009767.1|WP_012120820.1|2981838_2983137_-|organoarsenical-effux-MFS-transporter-ArsJ	unknown	unknown	gnl|CDD|340883
NC_009767.1|WP_012120827.1|2990593_2992117_+|glutamate--tRNA-ligase	unknown	unknown	gnl|CDD|234953

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012120817.1|2979826_2980192_+|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	5.9e-21	69.8	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120815.1|2976529_2978377_+|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	gnl|CDD|274738	TIGR03710, OAFO_sf, 2-oxoacid:acceptor oxidoreductase, alpha subunit. This family of proteins contains a C-terminal thiamine diphosphate (TPP) binding domain typical of flavodoxin/ferredoxin oxidoreductases (pfam01855) as well as an N-terminal domain similar to the gamma subunit of the same group of oxidoreductases (pfam01558). The genes represented by this model are always found in association with a neighboring gene for a beta subunit (TIGR02177) which also occurs in a 4-subunit (alpha/beta/gamma/ferredoxin) version of the system. This alpha/gamma plus beta structure was used to define the set of sequences to include in this model. This pair of genes is not consistantly observed in proximity to any electron acceptor genes, but is found next to putative ferredoxins or ferredoxin-domain proteins in Azoarcus sp. EbN1, Bradyrhizobium japonicum USDA 110, Frankia sp. CcI3, Rhodoferax ferrireducens DSM 15236, Rhodopseudomonas palustris BisB5, Os, Sphingomonas wittichii RW1 and Streptomyces clavuligerus. Other potential acceptors are also sporadically observed in close proximity including ferritin-like proteins, reberythrin, peroxiredoxin and a variety of other flavin and iron-sulfur cluster-containing proteins. The phylogenetic distribution of this family encompasses archaea, a number of deeply-branching bacterial clades and only a small number of firmicutes and proteobacteria. The enzyme from Sulfolobus has been characterized with respect to its substrate specificity, which is described as wide, encompassing various 2-oxoacids such as 2-oxoglutarate, 2-oxobutyrate and pyruvate. The enzyme from Hydrogenobacter thermophilus has been shown to have a high specificity towards 2-oxoglutarate and is one of the key enzymes in the reverse TCA cycle in this organism. Furthermore, considering its binding of coenzyme A, it can be reasonably inferred that the product of the reaction is succinyl-CoA. The genes for this enzyme in Prevotella intermedia 17, Persephonella marina EX-H1 and Picrophilus torridus DSM 9790 are in close proximity to a variety of TCA cycle genes. Persephonella marina and P. torridus are believed to encode complete TCA cycles, and none of these contains the lipoate-based 2-oxoglutarate dehydrogenase (E1/E2/E3) system. That system is presumed to be replaced by this one. In fact, the lipoate system is absent in most organisms possessing a member of this family, providing additional circumstantial evidence that many of these enzymes are capable of acting as 2-oxoglutarate dehydrogenases and.	0
NC_009767.1|WP_012120817.1|2979826_2980192_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	7.73538e-17
NC_009767.1|WP_012120827.1|2990593_2992117_+|glutamate--tRNA-ligase	gnl|CDD|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NC_009767.1|WP_012120834.1|3000322_3004528_+|alpha-amylase	gnl|CDD|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	3.42074e-168
NC_009767.1|WP_012120832.1|2996344_2997277_+|hypothetical-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.96502e-06
NC_009767.1|WP_012120829.1|2992990_2994235_+|CBS-domain-containing-protein	gnl|CDD|376875	pfam02641, DUF190, Uncharacterized ACR, COG1993.	8.11236e-35
NC_009767.1|WP_012120833.1|2997319_2999758_-|peptidase-C1	gnl|CDD|239068	cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W). Papain is an endopeptidase with specific substrate preferences, primarily for bulky hydrophobic or aromatic residues at the S2 subsite, a hydrophobic pocket in papain that accommodates the P2 sidechain of the substrate (the second residue away from the scissile bond). Most members of the papain subfamily are endopeptidases. Some exceptions to this rule can be explained by specific details of the catalytic domains like the occluding loop in cathepsin B which confers an additional carboxydipeptidyl activity and the mini-chain of cathepsin H resulting in an N-terminal exopeptidase activity. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds. Parasitic CPs act extracellularly to help invade tissues and cells, to hatch or to evade the host immune system. Mammalian CPs are primarily lysosomal enzymes with the exception of cathepsin W, which is retained in the endoplasmic reticulum. They are responsible for protein degradation in the lysosome. Papain-like CPs are synthesized as inactive proenzymes with N-terminal propeptide regions, which are removed upon activation. In addition to its inhibitory role, the propeptide is required for proper folding of the newly synthesized enzyme and its stabilization in denaturing pH conditions. Residues within the propeptide region also play a role in the transport of the proenzyme to lysosomes or acidified vesicles. Also included in this subfamily are proteins classified as non-peptidase homologs, which lack peptidase activity or have missing active site residues.	3.17714e-57
NC_009767.1|WP_012120814.1|2975560_2976274_+|hypothetical-protein	gnl|CDD|226755	COG4305, COG4305, Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism].	1.49107e-53
NC_009767.1|WP_012120830.1|2994259_2995309_-|polyprenyl-synthetase-family-protein	gnl|CDD|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	3.30993e-78
NC_009767.1|WP_085979078.1|2980404_2980953_+|GNAT-family-N-acetyltransferase	gnl|CDD|224167	COG1246, ArgA, N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism].	7.20458e-22
NC_009767.1|WP_012120816.1|2978671_2979718_+|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	gnl|CDD|235604	PRK05778, PRK05778, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated.	2.01452e-149
NC_009767.1|WP_012120826.1|2989534_2990473_-|UV-damage-repair-endonuclease	gnl|CDD|235029	PRK02308, uvsE, putative UV damage endonuclease; Provisional.	1.74197e-52
NC_009767.1|WP_012120819.1|2980903_2981734_+|arsenite-methyltransferase	gnl|CDD|237007	PRK11873, arsM, arsenite methyltransferase.	3.1516e-106
NC_009767.1|WP_012120821.1|2983184_2984195_-|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	gnl|CDD|169599	PRK08955, PRK08955, glyceraldehyde-3-phosphate dehydrogenase; Validated.	0
NC_009767.1|WP_012120828.1|2992107_2992665_-|FHA-domain-containing-protein	gnl|CDD|379873	pfam16697, Yop-YscD_cpl, Inner membrane component of T3SS, cytoplasmic domain. Yop-YscD-cpl is the cytoplasmic domain of Yop proteins like YscD from Proteobacteria. YscD forms part of the inner membrane component of the bacterial type III secretion injectosome apparatus.	9.33529e-12
NC_009767.1|WP_157042824.1|2984224_2984998_-|protein-tyrosine-phosphatase	gnl|CDD|319973	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family. Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).	9.37209e-68
NC_009767.1|WP_012120823.1|2985018_2985786_-|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl|CDD|319973	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family. Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).	6.0522e-61
NC_009767.1|WP_012120820.1|2981838_2983137_-|organoarsenical-effux-MFS-transporter-ArsJ	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.28794e-14
NC_009767.1|WP_012120831.1|2995567_2996209_-|histidine-phosphatase-family-protein	gnl|CDD|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	1.39884e-69

Protein sequences

>NC_009767.1|WP_012120823.1|2985018_2985786_-|metalloregulator-ArsR/SmtB-family-transcription-factor
MTLAHQHPIPPSPMPEALRLLGDETRWRLIGELRWSDRQVGELCERLDLPQNLVSYHLGVLRQAGLVRAHRSDADGRVLYYALDLAALQRQIQSISSALALPTRAAPPSSMDGPVLFICTRNSARSQIAEAWLRHLSGGRIITRSAGTAPASVQPLAIQVMAEAGIDIGYQRAKRIADVIEPAPAVVVTVCDLAREECSATLDAPLCLHWSIPDPVAVSGSESERLAAFRAARDELRLRVEGLLGLLPTISINPN
>NC_009767.1|WP_157042824.1|2984224_2984998_-|protein-tyrosine-phosphatase
MDMTIHDAVAFFRVLADPTRCAILVRLARSDERPTELSNALKQPLETIAAALADLESAGLITSRPSDAGGERYYHLDLERLQQRYAQAGGTIHPALAQAIAGIEEESAPRPKARVLFLCTHNSARSQMAEGLMRAFSHGSIEVFSAGSEPGPVHPLAVETMEAMRIDIRNQRSKHYEEFIGQHFDYVITVCDRARETCPVFPGLKESIHWSIPDPTTVEDETEQRRAFHQAATQLANRIRYLQILIERGQNTQSVRR
>NC_009767.1|WP_012120821.1|2983184_2984195_-|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase
MSVRIGINGFGRIGRLALRAMWGWPDISVAHINEIGGPVETAAHLLEFDSVHGRWQRDIQAENGRLIVDGVPIGYSSVKEPGAVPWRAAGVDIVLEATGKFRTRETLQAYFDAGVRKVIVAAPVKEGALNIVMGVNDHWYNPDEHHILTAASCTTNCLAPVVKVIHEGIGIVHGMITTIHDMTNTQSILDTPHKDLRRARASSLSLIPTTTGSATAIGLIFPELLGKLDGIAVRVPLLNASLTDCVFEVQRPTTVAEVNALLRAAADGPLAGILGYEHRPLVSVDFKDDPRSAIIDGPSTMVTNGTQVKIFAWYDNEWGYANRYVELARKVALALT
>NC_009767.1|WP_012120820.1|2981838_2983137_-|organoarsenical-effux-MFS-transporter-ArsJ
MATADIAAPRTTSNDLRNYILVTGAYWADTITDGAIRMLVLFYFYQLGYSPFQVAMLFLFYEIFGIVTNLFGGYLAARMGLKSTLFSGLGVQFVALSMLALPDSAWLTVPYVMAAQALSGIAKDLTKMSSKSAVKLIVAEDAQSTLFKWVAILTGSKNALKGVGFFVGGLLLYLVGFRVAIFILAGLVITALIVTATLMRGDLGKANKKAKFRQMFSHNRAVNVLAAARIFLFASRDVWFVVGLPVFLYTALGWNFWQVGGFLAIWVIGYGFVQASAPEVIKRRMKVDEAGIAHGSVPDGQTAMWLAFVLATFPAGIAVALAGGVDPALVVVAGLIAFGIIFAMNSSVHSYLILAYTESDKAAMGVGFYYMANAMGRLAGTVLSGAVYQIWGLVGCLWFAVAFVLAAGVISVALPRRAAGAPVVVAFGDGGD
>NC_009767.1|WP_012120819.1|2980903_2981734_+|arsenite-methyltransferase
MTHHFSSSETIKDQVRDHYAQRIQSGTCCGPSSGWCDNSTPTEIALYGAETVAALPQGLTSFGCGNPVALASLRMGEVVLDLGSGGGLDVLLAAQRVGATGYVYGLDMTDEMLSVARRNAERAEATNVEFLKGDIERIPLPSNTVDVIISNCVINLTPDKALALGEAFRVLKPGGRLAISDIVIDGDLSRFPVTEGQIRAALSWTGCIAGALTIEEYRTLLSDAGFTDSAVTVQHRYTIDDLPSDAPLDLATIPADVLNGLAGCFTSSAITARKPE
>NC_009767.1|WP_085979078.1|2980404_2980953_+|GNAT-family-N-acetyltransferase
MTSVRLLQSSLVLEGERAMNITPFTPDDWLLLLDLLKRVGLPRDGLEAHRECTLVIRDGPTIIGCAAIECYGGAGLLRSVAVDAAHRGRGVGEALVRAAIELAQRRGLHTLYLLTTSAADYFARFGFRAVSRDDVALAVRQSVEFNDVCPASAVVMQLDVQAGESLDDSSLLIIGNDQRPGA
>NC_009767.1|WP_012120817.1|2979826_2980192_+|helix-turn-helix-transcriptional-regulator
MALHDLIERERGTRCCADGAAPSLSLAEAQQVSDDFQILGHPVRLLILDVLARHAGKVCVCDLEAAVPVKQPTVSHHLRLLREAGLVDAERHGPWMYYFIRHEALEALRARITRMLALVDA
>NC_009767.1|WP_012120816.1|2978671_2979718_+|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta
MTVETKTNGKPNVNRIGLTSQDYRGGETTLCQGCGHNSITSQIIAAAFELSLAPHQVIKMSGIGCSSKTPAYFMSRSHGFNTLHGRMPSVTTGAVLANRTLLAIGISGDGDTGSIGLGQFKHMVRRNVPVVYIVENNGVYGLTKGQFSATADVGQTLKYAGTNVLPPIDICIEALAADCGFVARSFAGDAKQVRELLKAAMSFHGTAVIDIISPCVTFNNHHDSTKSYDYGKAHEERLQDIQFIPRFDEVHVEYEEGGERYVQLHDGPMIKLRKLGRDYDPTNRWQAIELLERARQNHEFITGLLYINTQRQTLHEVMHLTDTPLAYLPEDRLRPSRERFEQAMQEFV
>NC_009767.1|WP_012120815.1|2976529_2978377_+|2-oxoacid:acceptor-oxidoreductase-subunit-alpha
MIQMPDTEIQPRPLDRPASEPIVNDFSIVAATVNGSGSQTANNVLMRAIFKMGVPVSGKNLFPSNIQGLPTWFTIRVSKDGYTARRETTEILVAFNQRTADEDLASLVPGGVCVHPNDITFTNPRSDVSFYPLPVRDLVKQSGVDAKLRDYIANMVYVGALAELLSIDMNEIKAALERHFKGKAKPVSLNYGVVVAAAEWVRANLPKTDRFQVAPMDKTQGLILVDGNTAAAFGALMGGMTVCAWYPITPSTSLVDAMTELAPILRADPETNTTTYAIIQTEDEIAAAGIVVGAGWAGARAMTATSGPGLSLMNEFVSLAYFAEVPCVIWDVQRMGPSTGLPTRTSQGDVLSAYYMGHGDTHHVILFPGSMIECFEFGYLAFDLAERLQTPVLVLSDLDLGMNNWMSEPFTYPDRPLDRGKVLSADELEKFKDWGRYKDIDGDGIPYRTLPGNPNPRAAYLARGTGHNEYAIYSERPQDWQRNLDRLTRKHNTARTLVPKPVVQEAEDATIGIVAYGSTDPAVREACDMLRARGITASYLRIRALPLEATLTDFLAKYERVYVVELNQDGQMAQLVQLHAPEYAARIRPIHICNGLPMSAQFVVDSIVSAEHPVT
>NC_009767.1|WP_012120814.1|2975560_2976274_+|hypothetical-protein
MPLRILAFAGVCLLLAGIIPVVRAQNDTHTVYLPLVVRDAQYRTGEGTYYAADGTGNCMFDPSPHDLMVAAMNHIDYDNAALCGAFIEVIGPKGSVTVRIVDRCPECARGDVDMSPQAFERIADLSAGRVPIRWRIVSPNLAGPIAYRFKEGSNQWWTAVQIRNHRNPVARFEYLRADGQWQTVPRQMYNYFVASSGMGPGPYTFRVTDMYGNVLTDTDIPFVEGGVINGAAQFPPP
>NC_009767.1|WP_012120825.1|2988882_2989398_-|hypothetical-protein
MHPDHLSDLSLDDIPTATPVLVCVVTHPTDFERIRTEGWYRIPVDRTRVSLTVGYLAFYQTAAFGAERWAVRSIAAVRSVDLAYRYELIPDEPRHPRAAMRYYRFALGPLLRLPLAIPSRRLRRVTFIPTTFGQLLTARDIVDLWQPPTAPVWSDVWGAGVNARWKMSVEG
>NC_009767.1|WP_012120826.1|2989534_2990473_-|UV-damage-repair-endonuclease
MMALGISKILGCNRLFQAGVHQSAAGVHLSIRLLWVIEALRYLQAHHIRFYRLPDDLLAPEADGGSAADQIAGAAAMIDEVRSSIQTMAIRLSMHPSPGVAPGIADDAAAARALASIESLTLLLDALGAGRESVIVLHIGGEGNDSAAAIERFAARFERLSPAAQRRVAVEHDGERFGLFAALRLHRFTGMPVIFDALHFQLRNPERIGLSEALGLALATWSPGVRPEAHFSTQRTEAHLKPTTRGAPQVMAPRPGQHSDFINPFEFAAFLTAARGLPPFDVMLEAKAGDLALLRLRDDLRRYAPECAALVR
>NC_009767.1|WP_012120827.1|2990593_2992117_+|glutamate--tRNA-ligase
MGVIQGPVRVRFAPSPTGYLHIGGVRTALFNWLFARHYGGQFILRIEDTDEKRYVPGSADDLMASLRWVGIEWDEGPDIGGPHAPYVQSLRYEAGIYRPFVEQLLESGHAYLSFTTEEELERMRAEAQARGVKAFRFRGPERDWPLDRQREMAATGRPYTVRLKTPTEGVTAFRDLVRGGERIEFKNEELYDIVLVKSSGMPVYHLAHLVDDHLMRMTHVLRSDEWVASTPYHVLLYQAFGWDPPAFAHLPPILRQDGRGKLSKRTDDVAANRFWERGYLPDAMFNYLALQGWSYDGYTEIMSREELIERFTLDRVQPSPARWNPEKLLDMNGIYIRRLTTEQLVDAMAPFLARAGLIGNPPTPDERAYLLQLAPLIHERLKELGEAPELLEFFFRDVTDYDPQALIPKKMDASTTVAALQAARDRLASLEPWTHDRLEAELRALGEELGLKPGQLFGALRVAATGRTVAPPLFDTLAALGKPRTLRRLEAAISVLAAAHAEVKGQS
>NC_009767.1|WP_012120828.1|2992107_2992665_-|FHA-domain-containing-protein
MVKALVLTAITGTQIGRRYTVSERVNTIGSGPQCNVTLNDRHLQPRHAEIRQMFDRWFIVPLAPGGISLNGAPVSGQSRLNPGDQLTLGGTTYRISYEELEERALGTAAETQTQSVPRLGEYFVRRGILTPEQVARVVQRQRDMQSSGVTLPFGQIAYEMGLINRAQLEQALNEQRNDFQAHFHD
>NC_009767.1|WP_012120829.1|2992990_2994235_+|CBS-domain-containing-protein
MTAGEPLQRVRIYLSERDSAEGQPLYLIALDRLRREGASGATALRGIAGFGAGHRLRTAGIADFGQQTPIIIEWLDRAERVARVLPALDELLGEALITIEDIRAYRAALRSGGPFGSRSIADVARGDIMTVPPDLPLAAALDRLARARQPLLAVVDGQRLTGILVPEDAGRFGVMPLEALAELDDAERSASLARLALRPVRDAMREPRAIYIESPLAHTVNLLIEWGLDALPVTDNEGRLVGVFGVDQALRAALDGERASGHVRNAEPPPPVSLIMQMLVPTASAGADAAAVLLQTLQSAARTVVLMNGFYPTGVVSVSEATRRVREPLRSAWIAALMGDRSPLATLAAASSSGTTADDLAAAPALIPSHASEYDAIRILIEGEKQYLVVVDSEGRLAGMVTRRGLLRALAQEG
>NC_009767.1|WP_012120830.1|2994259_2995309_-|polyprenyl-synthetase-family-protein
MAHSPLHLGVPEQRLNEPAATTRTMPTGLGDILRRADLLNDMADVERQMLARTISRAPLLTAAGTYTVAAGGKRLRAALVLLCARLGMYDPSRALHPAIAIELLHAASLIHDDLVDHAGQRRGHVTVHSRWDADVALLLGDYFFALAANELAAEPDPRIIAFYTSAAQTMVEGELNPVTQIEPLAIAVEQYYRKIGCKTAVLFEAACKAGIAVAGGDDAQIETLGRFGYDLGLAFQIVDDVLDYTGDETALGKPAGNDLREGTLTLPLMYAVAQSRHPLLLAIANGQRPEPARVPQIVAAVIASGGADRAMEEARRLIERANQQLTLFAPTPARRALIEIGEFVLNRRM
>NC_009767.1|WP_012120831.1|2995567_2996209_-|histidine-phosphatase-family-protein
MRLIIIRHGESVWNREGRYQGQMDAPLSELGLRQAEALAERLRNEPLDAIFTSPLQRAARTAEAIARYHPNVPLLTSSALLEIHHGEWQGLLVDEVIERYSEGLREWRQHPTRAQMPGGESFSNVLKRVLDFKEWLLREYHERTVLVSTHDVVVKILVADALGMNMDRINRIWVTNASISVVEYGDDLPYLVSLSEACHLGRLEVARENQKAL
>NC_009767.1|WP_012120832.1|2996344_2997277_+|hypothetical-protein
MKVERRPSIETTAQTPLGRLRAALDSAEGVAVSAGMSADDAVSFLRACDMIEQCISEVGADADIRPETNRADFVRERLRVNAEAIVRVIRRADRVGEVETCRSWVRALAIASDRRARRVRRLAVMGIGAAALIAALLLLPVIVPAQPAPAIGAISRLLANEGASAALDLARAEYERFPNDPEVALWRGVLELRAGDPAAAENLFEQARQQAAGEIGFLFERGTLLIQVGLLDAAETDAAALIARPDAQAEGYLLLGSVREARGDRNGAIAAFQQAADRAAAADKPHLEVIAKTRLGMVLQALPAAPAPER
>NC_009767.1|WP_012120833.1|2997319_2999758_-|peptidase-C1
MLIVALFRRLASACTFLVIIAAGVLTLPSAVRSSPNDIIVTLAHHGTSVAVAEGQRLIVKLEGQPGTGYGWELKEPSSLLQTSDPVFEPLSASSAAATSAPMVQAFRFTPVRAGSETLTLVYRRPWERQAAPLRTFTIQVETTGRFAAPSPSAQTAALPQSLPPVAMGSDEGLPAAFNWCEQGICTPVKDQGGCGSCWAFATAGVVESAIKRIDGVERDLSEQYLLSAGTHGGCDGGMPAYDLFIGATPAHQTEAGVVYESDLPYTGQDAPLTRALPHHERMLAWNSLFNADVATIKRIIREHGPVSAYVCAGSRFMWHRSGVFETDESAACNGSINHAVVLVGWDDSKGTRGAWRLRNSWGATWGENGYMWIGYGISGLGQWIDYVYYDRLEPGAYAISGRVREQWHGTAGVSVSDGSRSAITDQYGVYVLKNVSPGTYTLTPSRSNAAFSPATRTVTVGNGKNAGNQNFALLATYRISGRVTGSFGEGLPGARVSDGTRSAVTDANGNYVIEGVLSGAYALTASLSGYTFTPNPLWVVVNSDVGGQDFTVVCSSCTISGRVVDSAGNGVAGATISDGMRSATTNAQGFYTLISVPPGTYTLTPSHSDYIFTPSARSITVNRHLSDQNFTAICASCSINGQVTDNAGNGVAGVTISDGARSVMTDAQGRYALTNVPPGVATLVATRNGYAFSPSSRSLTVDRHLSGQDFTAIPAPYTVSGRITDSAGNGIGGVTVSDGARSVVTDGSGVFTLRNIPAGTYTLTPSHGSDTFTPANRTVTVTGDISGQDFALASPAPAAPADYTVFLPLTVR
>NC_009767.1|WP_012120834.1|3000322_3004528_+|alpha-amylase
MSHHRHRRGTVLLALIGMLLTVVALPGALPVARASDTPDPSSVTIAGSFQSELGCPGDWQPECAITRLVYDAADQVWQATFTIPAGTWEYKAALNGSWDENYGANAQRNGANIPLTLSAAASVRFYYDHETHWVVSDRNTRIVTAPGNYQSELGCPGDWQPDCLRSWLQDPNGDEVFVRTVTGLPAGNYEFKIAIHESWSENYGAGGAPGGANIPFTVPAPGYRVTFTFVSATNTPSVAVVSAGAQPDNNVEWDGVRHDSRDPLYRAPGGAVPAGTPVTIRLRTFHNDVTSVRLRVYDLNASTQRFYDMAPAATDVDCYEASLAGKTCDFWEVMLTQAAPNNLWYRFIVTDGTDTDYYDDNTPALDGGLGAMTDEQEDHSWALMFYDPAFTVPEWATSAVIYQIFPDRFRNGDPRNDPRTGDSRYDDPVIALPWGELPEGHCRNYSDAATNCPWRFDDTPPSWSPTKEGPRGRDYYGGDLRGVISRLDYLKNLGVTVIYFNPIFHAKSNHRYDTYDYFRIDPALGTLADFRRLVREAERRGIRVIVDSVFNHMSSDSPQFDRYGYYASLGACESAASPYRDWFRFRRPGPGEPSPCAPSTPGGDDTYYVGWFGFDSIPEIRKEHPAVLNYFVTGSNSVSRYWLRQGASGWRLDVMGDPSFPPDYWPTFRRVVRETRHDALIIGELWQKDSTLLRHLRGDTADTTMNYRLRDAIIGLLTPGPFDSKGFADSGRPIAPSEFAHRISSIREDYPDAAYLTLMNLVGSHDTERILWTLTPGAETRADKEFNAANLANGKQRLRIASLIQFTMPGAPTIYYGDEVGVTGDDDPDDRRTYPWVETGGNPDRALLRHYRDLARIRHHYRSLRAGDLRFLLADDTAGTVAYSRISGDDAAIVAINRSSQPRTVDIPVSGVIPDGTAFFPSYCVANDQLKDWLHVENGRLRVTLNPMSAVLLTSYLADLTPPASPANLWVTDEGDGQVSLTWNGVPGAAGYNLYRSPLSGGGFVKVNDAPLTAIVYTDTGLRNARDYFYVVTAVDEKGNESAVSNEVRAMPRLQIGWANLQWPPSITHTISAINRTPLIFGQVWINGVTNRPGATEGLRAQLGYGPRDSDPAGNPAWTWIEAEFNVDAGNNDEFKASLLPDQTGAFDYAYRYSTTNGRSWVYADLDGIGNGYTPSQAGKLTVVASSDTTPPVVPTGLTVVTASPTGIALRWNAVTGDPTLYGYEVRRSSVSGGPYTTIATITGAEYTDTSIIQGATYYYVVRAVDTSFNRSGESAEVAATAELRTVSVTFTVTVPATTPAGSTVYIAGFLDRLDGNLPQWNPGGVALTQIGPNRWSITLTGKETTQIEYKYTLGSWDYVEKGAACDEIANRQLTLSYGVDGTQVVNDSVPNWRNVAPCGN

Crispr_ID: NC_009767_56

• CRISPR_ID: NC_009767_56
• CRISPR_location: 3016552-3016704
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_009767_56

Consensus_repeat	Method
CGGGGCAGGTATGGTGAAACATC	CRISPRCasFinder

spacers of NC_009767_56

>56.1|3016575|30|NC_009767|CRISPRCasFinder
CAGCGCGTGCGAGCGCAGAGGTGCTCCGAT
>56.2|3016628|54|NC_009767|CRISPRCasFinder
ATTGCCGATTTGCCGTCCTATGACCTGCTCCTAGACCTACGCAGCGCGTCGCTC

CRISPR arrays and Neighbor proteins around NC_009767_56

CRISPR arrays

The CRISPR arrays of NC_009767_56

>merge|NC_009767|56|3016552-3016704|CRISPRCasFinder
CGGGGCAGGTATGGTGAAACATCCAGCGCGTGCGAGCGCAGAGGTGCTCCGATCAGGGCAGGTATGGTGAAACATCATTGCCGATTTGCCGTCCTATGACCTGCTCCTAGACCTACGCAGCGCGTCGCTCCAGGGCAGGTATGGTGAAAGGTG

>NC_009767|56|47|3016552-3016704|CRISPRCasFinder
CGGGGCAGGTATGGTGAAACATC	CAGCGCGTGCGAGCGCAGAGGTGCTCCGAT
CAGGGCAGGTATGGTGAAACATC	ATTGCCGATTTGCCGTCCTATGACCTGCTCCTAGACCTACGCAGCGCGTCGCTC
CAGGGCAGGTATGGTGAAAGGTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120845.1|3017317_3017845_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|153102
NC_009767.1|WP_012120834.1|3000322_3004528_+|alpha-amylase	unknown	unknown	gnl|CDD|200477
NC_009767.1|WP_012120847.1|3018835_3019615_-|DUF4397-domain-containing-protein	unknown	unknown	gnl|CDD|379570
NC_009767.1|WP_012120850.1|3022379_3023483_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_009767.1|WP_012120849.1|3020925_3022137_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|226925
NC_009767.1|WP_012120842.1|3012658_3013765_+|NADP-transhydrogenase-subunit-alpha	unknown	unknown	gnl|CDD|376763
NC_009767.1|WP_041330684.1|3005107_3005968_-|DUF3782-domain-containing-protein	unknown	unknown	gnl|CDD|369519
NC_009767.1|WP_157042633.1|3006180_3006696_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042634.1|3018266_3018518_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120837.1|3006680_3006959_+|PspC-domain-containing-protein	unknown	unknown	gnl|CDD|377200
NC_009767.1|WP_041331978.1|3007068_3008478_-|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	unknown	unknown	gnl|CDD|274360
NC_009767.1|WP_012120851.1|3023824_3024859_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|132489
NC_009767.1|WP_041330690.1|3016830_3017232_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120848.1|3019878_3020916_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012120846.1|3017944_3018286_-|LapA-family-protein	unknown	unknown	gnl|CDD|377648
NC_009767.1|WP_041330686.1|3009138_3009345_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120843.1|3014988_3016485_+|asparagine-synthase-B	unknown	unknown	gnl|CDD|236513
NC_009767.1|WP_012120841.1|3010975_3012634_+|cobalamin-B12-binding-domain-containing-protein	unknown	unknown	gnl|CDD|376761
NC_009767.1|WP_012120853.1|3031075_3031468_-|HEPN-domain-containing-protein	unknown	unknown	gnl|CDD|368314
NC_009767.1|WP_012120840.1|3009450_3010239_+|nucleoside-phosphorylase	unknown	unknown	gnl|CDD|350167

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120843.1|3014988_3016485_+|asparagine-synthase-B	gnl|CDD|236513	PRK09431, asnB, asparagine synthetase B; Provisional.	0
NC_009767.1|WP_012120834.1|3000322_3004528_+|alpha-amylase	gnl|CDD|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	3.42074e-168
NC_009767.1|WP_012120842.1|3012658_3013765_+|NADP-transhydrogenase-subunit-alpha	gnl|CDD|376763	pfam02317, Octopine_DH, NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain. This group of enzymes act on the CH-NH substrate bond using NAD(+) or NADP(+) as an acceptor. The Pfam family consists mainly of octopine and nopaline dehydrogenases from Ti plasmids.	9.58648e-60
NC_009767.1|WP_041330684.1|3005107_3005968_-|DUF3782-domain-containing-protein	gnl|CDD|369519	pfam07788, PDDEXK_10, PD-(D/E)XK nuclease superfamily. This family is found to carry modified motifs characteristic of PD-(D/E)XK endonuclease superfamily. These are the conserved Glu of motif I, the Asp surreounded by hydrophobics of motif II, EIKS of motif III, and the lysine of mmotif IV has migrated to an alpha-helix following the third core beta-strand. The conserved patch of positively charged lysine and arginine residues in the motif IV apha-helix might be involved in substrate-binding or be contributing to active site formation. Members with an additional N-terminal coi9led-coil domain, are annotated as tropomyosin, coiled-coil or microtubule binding proteins.	2.95627e-25
NC_009767.1|WP_012120850.1|3022379_3023483_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.74923e-19
NC_009767.1|WP_012120837.1|3006680_3006959_+|PspC-domain-containing-protein	gnl|CDD|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	2.38091e-27
NC_009767.1|WP_041331978.1|3007068_3008478_-|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	gnl|CDD|274360	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity].	5.28737e-127
NC_009767.1|WP_012120851.1|3023824_3024859_+|GNAT-family-N-acetyltransferase	gnl|CDD|132489	TIGR03448, mycothiol_MshD, mycothiol synthase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	8.01341e-09
NC_009767.1|WP_012120846.1|3017944_3018286_-|LapA-family-protein	gnl|CDD|377648	pfam06305, LapA_dom, Lipopolysaccharide assembly protein A domain. This family includes a domain found in lipopolysaccharide assembly protein A (LapA). LapA functions along with LapB in the assembly of lipopolysaccharide (LPS). Domains in this family are also found in some uncharacterized bacterial proteins.	1.64092e-11
NC_009767.1|WP_012120848.1|3019878_3020916_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.77621e-49
NC_009767.1|WP_012120847.1|3018835_3019615_-|DUF4397-domain-containing-protein	gnl|CDD|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	5.1852e-39
NC_009767.1|WP_012120841.1|3010975_3012634_+|cobalamin-B12-binding-domain-containing-protein	gnl|CDD|376761	pfam02310, B12-binding, B12 binding domain. This domain binds to B12 (adenosylcobamide), it is found in several enzymes, such as glutamate mutase, methionine synthase, and methylmalonyl-CoA mutase. It contains a conserved DxHxxGx(41)SxVx(26)GG motif, which is important for B12 binding.	3.64527e-08
NC_009767.1|WP_012120845.1|3017317_3017845_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|153102	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain. DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. Members of the DPS family are homopolymers formed by 12 four-helix bundle subunits that assemble with 23 symmetry into a hollow shell. The DPS ferroxidase site is unusual in that it is not located in a four-helix bundle as in ferritin, but is shared by 2-fold symmetry-related subunits providing the iron ligands. Many DPS sequences (e.g., E. coli) display an N-terminal extension of variable length that contains two or three positively charged lysine residues that extends into the solvent and is thought to play an important role in the stabilization of the complex with DNA. DPS Listeria Flp, Bacillus anthracis Dlp-1 and Dlp-2, and Helicobacter pylori HP-NAP which lack the N-terminal extension, do not bind DNA. DPS proteins from Helicobacter pylori, Treponema pallidum, and Borrelia burgdorferi are highly immunogenic.	3.53125e-56
NC_009767.1|WP_012120849.1|3020925_3022137_-|GNAT-family-N-acetyltransferase	gnl|CDD|226925	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only].	2.46979e-35
NC_009767.1|WP_012120853.1|3031075_3031468_-|HEPN-domain-containing-protein	gnl|CDD|368314	pfam05168, HEPN, HEPN domain.	2.51082e-23
NC_009767.1|WP_012120840.1|3009450_3010239_+|nucleoside-phosphorylase	gnl|CDD|350167	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases. Uridine phosphorylase (UP) is specific for pyrimidines, and is involved in pyrimidine salvage and in the maintenance of uridine homeostasis. In addition to E. coli Udp, this subfamily includes Shewanella oneidensis MR-1 UP and Plasmodium falciparum purine nucleoside phosphorylase (PfPNP). PfPNP is an outlier in terms of genetic distance from the other families of PNPs. PfPNP is catalytically active for inosine and guanosine, and in addition, has a weak UP activity. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	1.53243e-87

Protein sequences

>NC_009767.1|WP_012120843.1|3014988_3016485_+|asparagine-synthase-B
MCGIAGVYRSTDGTGIERMLAWLSHRGPDGRGVVAADSGVLGHTRLAIIDLDGGRQPMEHDGALICFNGEIYNYRALRNRYLRGQALETDSDTEVLLRLYRTLGPGCVRLLEGMFAFAILDGDDLFLARDPIGIKPLYLARSGDALLFASEIKALALHADQVTTFPPGTWYHSRFGSHTYYEIAQGWPQSGMFETPDQAITAIRAVLRAAVHKRLLADVPVGVSLSGGLDSSIIALLACAELDQVETFAVGMEGSADLEAARQMARYLGTHHHEYVYTRAEMEAALPDVIYYLESADPALVRSALPNYFLARLASERVKVILTGEGADELYAGYDYMRSIASPEDLHRELETSIRELHRTNLQRADRMFMAFGVEARVPFLDVESIALALSLPSEWKQAAPGEPTKMLLRRAFADELPESIVQRPKQKFSAGAGSMYELAKVAEERFDNRTFARERQRLLHRWGYRLRNKEALYYLDTLRAVLPERLIMPEMGVSRSL
>NC_009767.1|WP_012120842.1|3012658_3013765_+|NADP-transhydrogenase-subunit-alpha
MTSSTRYTVIGAGNGGKAMAAHLALMGFETTLYNRTPEHIEAIRQRRGIELDSGETGPRGFGQLALVTSDMKEALDRCDVAMVVVPSSAHAEVARAMAPYLRDGQIILLHPGRTCGAIEVAKVLRDERCRADVTVAEAETFIYASRSDGPAQARIFRIKEAVPLAALPAYRTGDVLGVIRDAFPQYIDGGNVLRTGLNNMGAIFHPALTLLNAGRIESTRGDFQFYIDGVTPSVARVLEVIDRERVTVAAALGIRARTAQEWLALAYNATGDSLYEAIQNQPGYYGIKAPPTLNHRYIFEDVPMSLVPIAALGQRYGVAVAGIDSIIRLACIIHRTDYWRRGRTLDRLGIANLSVSELTRYVEEGTLE
>NC_009767.1|WP_012120841.1|3010975_3012634_+|cobalamin-B12-binding-domain-containing-protein
MTEKQKTVVAAALGECVHVAGVMNFLRLAEEAGWRTVFLGPATPIERVLEAARQEQADLVGVSYRLTPETGAHLLGRFAEAADDLHAAGVRFAFAGTPPLAEKAATLGFFEQVFDGSEPADQVLAYLRGQNPAHATEADFPQRTVDRIRWKAPFPLIRHHFGLPTMQATIDGIARIAEARCLDVISLGTDQDAQENFFRPERQDPARTGAGGVPVRSADDYRALYAASRRGNYPLMRTYSGTDDFVRLAELYVETINIAWCAIPLFWFNRMDGRGPWDLEGSIREHQTIMRWYGERDIPVELNEPHHWGMRDAPDTVFVASAYLSAYNARAFGVRDYIAQLMFNSPPGLSDAMDLAKMLAVIEITAPLAGPDFRIWKQTRTGLLSYPVDPAASRAHLSASIYLQMALRPHIIHVVGHTEAHHAATADDVIEACGIARRAIENALRGQPDMTADPSVRARAAQLVEETHLLLNAMAQLAPPGVTDPLTDPATLTKAVEIGLLDAPQLRNNPFAPGRVATRFINGMCLAVDAQGRPLDEKERIRLALDHATMSA
>NC_009767.1|WP_012120840.1|3009450_3010239_+|nucleoside-phosphorylase
MNGNDRLYHIGFGRSDLGDDPPRIALLSGDPERARLIAQTALRGARVLSENRGLHSSVGTLPNGAPILSATSGMGAPSLSIVVNELVQVGVRTIIRVGTSGSIQLHIPPGSIVISSAALCRQGAADDIAPREFPAAADPFVTVALIEAARAAGVEYFAGVTASVDTFYEGQERTGSANPHLLRRLRGITDEYRRLNILNYEMEAGTLFKMGLVYGFAAGCVCGIVAQRTASEAIIVERKAVAIERAIAVAVRAAIALTASPA
>NC_009767.1|WP_041330686.1|3009138_3009345_+|hypothetical-protein
MLWCVRWCAGTGAILALKQYVGFVAGQRVTVLGRIVDHGSGRAIEAAFLFGGAPADYPSYQRGIAIDG
>NC_009767.1|WP_041331978.1|3007068_3008478_-|wax-ester/triacylglycerol-synthase-family-O-acyltransferase
MAQDSHPLGAVDSAWLHMDDPTNLMMVTGVALLDGPIDVERCYKTFESRLLSFERFRMRVTDQRGSFSAPRWEPDPHFSIRAHVHRVALPSPGDMTTLQEFLGDLASTPLDYTKPLWQVHLVENVLGGSAVVMRFHHCIGDGAAMNTVMHRLMDKTPDAPIELPRPQSNHNHTLGPLLEPIVATIEGSIKLADELVHEGMEFLRHPEHLLDLPAQAASGAMALSRVLLLPPETKTLFKGPLGVQKRVAWSSPTPLEQVKQIGKTAGAKVNDVLLAAVAGALRNYLIGRGASADGVEIRAVIPVDLRPPSRAHDLGNEFGLVFLSLPLGTPSPVVRLAEVKQRMEALKRSPEAYVFYGLLNFFGRTPAQVEEQAVNLFGSKATAVMTNVRGPTEQLYLAGNRIKNMMFWVPQSGRLGMGVSIMSYCGQVTLGVITDAGLVPDPETITAAFEQEFHVLYDAIVAPTSATTP
>NC_009767.1|WP_012120837.1|3006680_3006959_+|PspC-domain-containing-protein
MGSQLVRSKSDRMIAGVCGGLARYFNIDPVIVRLVFVLAVLFGGISPLVYVILWIVMPEEGAVPAPPQLNHPRPVEEWKYDPYTGEPIRRES
>NC_009767.1|WP_157042633.1|3006180_3006696_+|hypothetical-protein
MGVMDGTRQPRPLGAQIEECRWAIVVARVEDRRRQDRRDAQHLRRVTPGGTRLRRRLPDLDYIVRAGDQNGVRGIAADIDVSRIAHWIYARMMTVGNYGHRTMVRAEIQALDRIGAKTIANRRGSGATVRAAGRARVTVAGDESRNLWRCAFVTQCRKSRMRKDGSQWVAS
>NC_009767.1|WP_041330684.1|3005107_3005968_-|DUF3782-domain-containing-protein
MSIDREQLRDLILQELPALFERDPELQRLIVRLSQQYFADRRETESRFDQMLDELRRDREEQSRRWAEQMRLWDEQNRKWDEQVRLWDEQNRKWDEQVRLWDEQNRKWDEQVGLWDEQNRKWEEQNRRWEENQREIRELIQRTDVLNRRFDSTIGALGARWGLSSEHSFRSALQGILTDFFPLEVIHVNEYDDSGEVFGRPEQVELDLIIKNGVLLICEIKSSMSKADMYLFERKARWYQQRHGRTAQRLIVISPMVDPAARKVAERLGIAVYSFPEDAGKAITEP
>NC_009767.1|WP_012120834.1|3000322_3004528_+|alpha-amylase
MSHHRHRRGTVLLALIGMLLTVVALPGALPVARASDTPDPSSVTIAGSFQSELGCPGDWQPECAITRLVYDAADQVWQATFTIPAGTWEYKAALNGSWDENYGANAQRNGANIPLTLSAAASVRFYYDHETHWVVSDRNTRIVTAPGNYQSELGCPGDWQPDCLRSWLQDPNGDEVFVRTVTGLPAGNYEFKIAIHESWSENYGAGGAPGGANIPFTVPAPGYRVTFTFVSATNTPSVAVVSAGAQPDNNVEWDGVRHDSRDPLYRAPGGAVPAGTPVTIRLRTFHNDVTSVRLRVYDLNASTQRFYDMAPAATDVDCYEASLAGKTCDFWEVMLTQAAPNNLWYRFIVTDGTDTDYYDDNTPALDGGLGAMTDEQEDHSWALMFYDPAFTVPEWATSAVIYQIFPDRFRNGDPRNDPRTGDSRYDDPVIALPWGELPEGHCRNYSDAATNCPWRFDDTPPSWSPTKEGPRGRDYYGGDLRGVISRLDYLKNLGVTVIYFNPIFHAKSNHRYDTYDYFRIDPALGTLADFRRLVREAERRGIRVIVDSVFNHMSSDSPQFDRYGYYASLGACESAASPYRDWFRFRRPGPGEPSPCAPSTPGGDDTYYVGWFGFDSIPEIRKEHPAVLNYFVTGSNSVSRYWLRQGASGWRLDVMGDPSFPPDYWPTFRRVVRETRHDALIIGELWQKDSTLLRHLRGDTADTTMNYRLRDAIIGLLTPGPFDSKGFADSGRPIAPSEFAHRISSIREDYPDAAYLTLMNLVGSHDTERILWTLTPGAETRADKEFNAANLANGKQRLRIASLIQFTMPGAPTIYYGDEVGVTGDDDPDDRRTYPWVETGGNPDRALLRHYRDLARIRHHYRSLRAGDLRFLLADDTAGTVAYSRISGDDAAIVAINRSSQPRTVDIPVSGVIPDGTAFFPSYCVANDQLKDWLHVENGRLRVTLNPMSAVLLTSYLADLTPPASPANLWVTDEGDGQVSLTWNGVPGAAGYNLYRSPLSGGGFVKVNDAPLTAIVYTDTGLRNARDYFYVVTAVDEKGNESAVSNEVRAMPRLQIGWANLQWPPSITHTISAINRTPLIFGQVWINGVTNRPGATEGLRAQLGYGPRDSDPAGNPAWTWIEAEFNVDAGNNDEFKASLLPDQTGAFDYAYRYSTTNGRSWVYADLDGIGNGYTPSQAGKLTVVASSDTTPPVVPTGLTVVTASPTGIALRWNAVTGDPTLYGYEVRRSSVSGGPYTTIATITGAEYTDTSIIQGATYYYVVRAVDTSFNRSGESAEVAATAELRTVSVTFTVTVPATTPAGSTVYIAGFLDRLDGNLPQWNPGGVALTQIGPNRWSITLTGKETTQIEYKYTLGSWDYVEKGAACDEIANRQLTLSYGVDGTQVVNDSVPNWRNVAPCGN
>NC_009767.1|WP_041330690.1|3016830_3017232_+|hypothetical-protein
MELTTIIQVTPGRLIGLAPDGDLRLVWDYTTIRIPVFDLPHLAALLDLWLLEEEPPLLRRGYYRLMHSPEGGYQLWLHTAGLWLSHQDVHILMTLVNATVEELCRPLCRQPKAPFGLGYRKFIASPRKGHNQN
>NC_009767.1|WP_012120845.1|3017317_3017845_-|DNA-starvation/stationary-phase-protection-protein
MSAEIGTGRITTTPKPDIGLSETSIQGVTAILSRLLADEHVLYTRLRNYHWNLVGMAFGPLHALFQQQYEALADDIDDIAERIRMLGPAAPGTMTEFLQLATLAEHPGDLPDERGMVRQLVADHEAIIRHLRQDLRACDEQYDDMGTSDFLTTLMEKHEKMAWMLRAHIEERNQG
>NC_009767.1|WP_012120846.1|3017944_3018286_-|LapA-family-protein
MRVVMFILMTVLSVMLVLFGVQNPQPVEVRFLMFTSGPISLSLVMILAVIAGATLVGLFTGYSGIRHSLRERRLSKAQAALEQRIAQLEKENEQLRAKAPSRQEPVSQKNSQG
>NC_009767.1|WP_157042634.1|3018266_3018518_+|hypothetical-protein
MNITTRMGDLYNSVRVVCEHNYHSIELSDWKSLLNAPGFLGASRIVLSQAIAEHLPAGVSPATAAASRPLARGLADLYNTNDD
>NC_009767.1|WP_012120847.1|3018835_3019615_-|DUF4397-domain-containing-protein
MRSKSWILLLLGALIALAVAPAAFAQVATAKVRVIHASPDAPAVDVIVNGNRALTNVPFFAASAYLDLPAGSYDIQVVPAGATSPVVIDAKGVRIEAGKAYTIAATGKLAEIKPTILMDDLTAPAAGKAHVRVIHFSPDAPAVDIKVAGGPTLISNLAFPNASNYLPVDAGSYDLQVTPAGGTAVVLDLKGTRLEAGKIYDVFAVGELANIKVEVAVTTPAAAPAALPRTGGETGIAMWALVAAMALIGAGLVMRRRVA
>NC_009767.1|WP_012120848.1|3019878_3020916_-|glycosyltransferase-family-4-protein
MVRPLYISPVGRGGVDFGIQNITRAVRRYGAPRAELLRLPEIYNFLPILIPRGLPRGWWRGFDLIQGRSRVAFALRAPGRPLVTTVHHLTTDPDLQPYSTPAQRLFYRLIEARYDWWSISSADAVVCVSRYTQQQVARAYGYTNTTVIYDGIDTDVFVPPPDMQRRNDGLPDCDGRIRLLFVGNRTRRKGFDLLPRIMNLLPEAYVLYYTSGFQDVDEGPPHPRMVPIGAPDRDGLVAAYQSCDILLAPSRLEGFGIVQAEALACGRPVVTTRISALPEVVDHERSGFLCPRDDVAAYAEAVQRLGEDEALRRRFGEYGREKVARSFGFEQLGRGFLDLYERLVR
>NC_009767.1|WP_012120849.1|3020925_3022137_-|GNAT-family-N-acetyltransferase
MSSAGDDLSYRVVAPDDEQFALNAALAYNRPTGETHRAQRTPSPEARRGLYRDGRLVTQCVLLPLRIAHGGGGTVPVGGIGAVATPPEERRRGYVARLLREVCDELRSQRAPLVMLSAFKESFYRRYGWATFYEARQFSGAPAWFAPFRAQQAGRWVRLDESAAATAELDAAYRSALRGRFGPLERNAVWWQTRVLHAGDGSPHWAYLWRDDAGHGRSYAIFSIERGERGQELHCREAAALDPQARAQIFALFSMFEDQCVDVIFTAPADAPVQALMSDPLRCAMVPGAMLRMIDVAMAMEAYSFPRDVAGRLTIRITDDWLDHNNGVFALDVEGGSARMTRLSDGVDADIHCDVRTLTQVYSRYLRPRTAAAFGLIDARSRPALALVERLFVGLAPYASDWF
>NC_009767.1|WP_012120850.1|3022379_3023483_-|class-I-SAM-dependent-methyltransferase
MVPYDLYRLLRCPTCGSRDLIVTDGGVACAACHAEYPRRNGYLDLMPRGVEFGYVSKYVSEEEELAHELDYRDLAPPLLAAGVRNRALRRLLDLRPTDIVLDSGCGNGRFAAWNANRVRLMVGVDPATLFADEAIKTVALVQGDARRLPFADGMFDKAFSIDVLEHFPRDVIDAYLSETARVLRPGGRFLVFSNTREPSRLQPLVEASRWLGRQFVRAGVYDFEREARRKSDHIKALATWEDVLEAMRHAGLRPVRVVFWNSVATSFVEHVLMKLGEAVVGRSRREAPHRAAAASTDDGAPIGEGTAREIRARQRMRARLQRRGPVYYALLAVTLFMELDLWLFGRARSGSYFIVVEKPEVRRLIED
>NC_009767.1|WP_012120851.1|3023824_3024859_+|GNAT-family-N-acetyltransferase
MLHTWKVDEGVRVRPRTRPVKGCIGIRIRPFRRTDEEYAAVAAIVARAPAGEVCDFEYSNPAALRAFDEVFASDALPRRYVAVAPDGAIIGYAHTFPTTWIAEPGGFWAAVRVLPAYRRLTIGRQLLARALGEAHAAGGLFALAQVREQLADATDFAEQTGFTEMLRSWEMLLDPRVVDVAPLQRHVARAEASGIRLTTLAAQRAVDPDWLPKLHALHFTLNRDVPLPDAPNITLEWFEQFALTCPEAFFIAMDGDRYIGESVMHPDERQPGALKQHLTGVLREYRGRGVAMALKVLTIAYAQTCGYTQISTWVESTNASMLAINERLGFTRHPGLVVYRQDLT
>NC_009767.1|WP_012120853.1|3031075_3031468_-|HEPN-domain-containing-protein
MSGTTELAKEWIRKGDSDLFNARLVAASTGPYDTGCFHAQQAIEKYLKAFLAFHRHSIPRTHDLEELARLCDAIEPLPELALFDLAALSDFAVQLRYDFTIWPDVRELEDAVRQAEGIRDVIMPRLKIVL

Crispr_ID: NC_009767_57

• CRISPR_ID: NC_009767_57
• CRISPR_location: 3025176-3025283
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_57

Consensus_repeat	Method
GCATGCTTGTCATTCCGAGCGCAGCGAGGAATCT	CRISPRCasFinder

spacers of NC_009767_57

>57.1|3025210|40|NC_009767|CRISPRCasFinder
CAGCGGGTCGCGCACGACCCGGCTTACGATTGAAGATGCT

CRISPR arrays and Neighbor proteins around NC_009767_57

CRISPR arrays

The CRISPR arrays of NC_009767_57

>merge|NC_009767|57|3025176-3025283|CRISPRCasFinder
GCATGCTTGTCATTCCGAGCGCAGCGAGGAATCTCAGCGGGTCGCGCACGACCCGGCTTACGATTGAAGATGCTGCATGCTTGTCATTCCGAGCGCAGCGAGGAATCT

>NC_009767|57|48|3025176-3025283|CRISPRCasFinder
GCATGCTTGTCATTCCGAGCGCAGCGAGGAATCT	CAGCGGGTCGCGCACGACCCGGCTTACGATTGAAGATGCT
GCATGCTTGTCATTCCGAGCGCAGCGAGGAATCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_041330695.1|3034272_3034452_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120845.1|3017317_3017845_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|153102
NC_009767.1|WP_012120847.1|3018835_3019615_-|DUF4397-domain-containing-protein	unknown	unknown	gnl|CDD|379570
NC_009767.1|WP_157042634.1|3018266_3018518_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120860.1|3035120_3036050_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009767.1|WP_012120855.1|3031883_3032648_+|CHAT-domain-containing-protein	unknown	unknown	gnl|CDD|378942
NC_009767.1|WP_012120857.1|3033442_3033937_+|DUF3368-domain-containing-protein	unknown	unknown	gnl|CDD|225269
NC_009767.1|WP_012120862.1|3037143_3037746_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NC_009767.1|WP_012120850.1|3022379_3023483_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_009767.1|WP_012120856.1|3033189_3033450_+|UPF0175-family-protein	unknown	unknown	gnl|CDD|377095
NC_009767.1|WP_012120851.1|3023824_3024859_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|132489
NC_009767.1|WP_041330690.1|3016830_3017232_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042826.1|3036081_3036972_+|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl|CDD|234631
NC_009767.1|WP_012120848.1|3019878_3020916_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012120846.1|3017944_3018286_-|LapA-family-protein	unknown	unknown	gnl|CDD|377648
NC_009767.1|WP_012120849.1|3020925_3022137_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|226925
NC_009767.1|WP_012120843.1|3014988_3016485_+|asparagine-synthase-B	unknown	unknown	gnl|CDD|236513
NC_009767.1|WP_012120854.1|3031451_3031802_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_012120853.1|3031075_3031468_-|HEPN-domain-containing-protein	unknown	unknown	gnl|CDD|368314
NC_009767.1|WP_157042635.1|3034821_3035088_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120845.1|3017317_3017845_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|153102	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain. DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. Members of the DPS family are homopolymers formed by 12 four-helix bundle subunits that assemble with 23 symmetry into a hollow shell. The DPS ferroxidase site is unusual in that it is not located in a four-helix bundle as in ferritin, but is shared by 2-fold symmetry-related subunits providing the iron ligands. Many DPS sequences (e.g., E. coli) display an N-terminal extension of variable length that contains two or three positively charged lysine residues that extends into the solvent and is thought to play an important role in the stabilization of the complex with DNA. DPS Listeria Flp, Bacillus anthracis Dlp-1 and Dlp-2, and Helicobacter pylori HP-NAP which lack the N-terminal extension, do not bind DNA. DPS proteins from Helicobacter pylori, Treponema pallidum, and Borrelia burgdorferi are highly immunogenic.	3.53125e-56
NC_009767.1|WP_012120847.1|3018835_3019615_-|DUF4397-domain-containing-protein	gnl|CDD|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	5.1852e-39
NC_009767.1|WP_012120855.1|3031883_3032648_+|CHAT-domain-containing-protein	gnl|CDD|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	4.66664e-12
NC_009767.1|WP_012120860.1|3035120_3036050_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.10039e-84
NC_009767.1|WP_012120862.1|3037143_3037746_+|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	8.69367e-27
NC_009767.1|WP_012120857.1|3033442_3033937_+|DUF3368-domain-containing-protein	gnl|CDD|225269	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	6.41982e-34
NC_009767.1|WP_012120850.1|3022379_3023483_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.74923e-19
NC_009767.1|WP_012120856.1|3033189_3033450_+|UPF0175-family-protein	gnl|CDD|377095	pfam03683, UPF0175, Uncharacterized protein family (UPF0175). This family contains small proteins of unknown function.	7.72321e-24
NC_009767.1|WP_012120851.1|3023824_3024859_+|GNAT-family-N-acetyltransferase	gnl|CDD|132489	TIGR03448, mycothiol_MshD, mycothiol synthase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	8.01341e-09
NC_009767.1|WP_157042826.1|3036081_3036972_+|ribosome-small-subunit-dependent-GTPase-A	gnl|CDD|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	6.32683e-121
NC_009767.1|WP_012120848.1|3019878_3020916_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.77621e-49
NC_009767.1|WP_012120846.1|3017944_3018286_-|LapA-family-protein	gnl|CDD|377648	pfam06305, LapA_dom, Lipopolysaccharide assembly protein A domain. This family includes a domain found in lipopolysaccharide assembly protein A (LapA). LapA functions along with LapB in the assembly of lipopolysaccharide (LPS). Domains in this family are also found in some uncharacterized bacterial proteins.	1.64092e-11
NC_009767.1|WP_012120849.1|3020925_3022137_-|GNAT-family-N-acetyltransferase	gnl|CDD|226925	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only].	2.46979e-35
NC_009767.1|WP_012120843.1|3014988_3016485_+|asparagine-synthase-B	gnl|CDD|236513	PRK09431, asnB, asparagine synthetase B; Provisional.	0
NC_009767.1|WP_012120854.1|3031451_3031802_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	5.79917e-15
NC_009767.1|WP_012120853.1|3031075_3031468_-|HEPN-domain-containing-protein	gnl|CDD|368314	pfam05168, HEPN, HEPN domain.	2.51082e-23

Protein sequences

>NC_009767.1|WP_012120851.1|3023824_3024859_+|GNAT-family-N-acetyltransferase
MLHTWKVDEGVRVRPRTRPVKGCIGIRIRPFRRTDEEYAAVAAIVARAPAGEVCDFEYSNPAALRAFDEVFASDALPRRYVAVAPDGAIIGYAHTFPTTWIAEPGGFWAAVRVLPAYRRLTIGRQLLARALGEAHAAGGLFALAQVREQLADATDFAEQTGFTEMLRSWEMLLDPRVVDVAPLQRHVARAEASGIRLTTLAAQRAVDPDWLPKLHALHFTLNRDVPLPDAPNITLEWFEQFALTCPEAFFIAMDGDRYIGESVMHPDERQPGALKQHLTGVLREYRGRGVAMALKVLTIAYAQTCGYTQISTWVESTNASMLAINERLGFTRHPGLVVYRQDLT
>NC_009767.1|WP_012120850.1|3022379_3023483_-|class-I-SAM-dependent-methyltransferase
MVPYDLYRLLRCPTCGSRDLIVTDGGVACAACHAEYPRRNGYLDLMPRGVEFGYVSKYVSEEEELAHELDYRDLAPPLLAAGVRNRALRRLLDLRPTDIVLDSGCGNGRFAAWNANRVRLMVGVDPATLFADEAIKTVALVQGDARRLPFADGMFDKAFSIDVLEHFPRDVIDAYLSETARVLRPGGRFLVFSNTREPSRLQPLVEASRWLGRQFVRAGVYDFEREARRKSDHIKALATWEDVLEAMRHAGLRPVRVVFWNSVATSFVEHVLMKLGEAVVGRSRREAPHRAAAASTDDGAPIGEGTAREIRARQRMRARLQRRGPVYYALLAVTLFMELDLWLFGRARSGSYFIVVEKPEVRRLIED
>NC_009767.1|WP_012120849.1|3020925_3022137_-|GNAT-family-N-acetyltransferase
MSSAGDDLSYRVVAPDDEQFALNAALAYNRPTGETHRAQRTPSPEARRGLYRDGRLVTQCVLLPLRIAHGGGGTVPVGGIGAVATPPEERRRGYVARLLREVCDELRSQRAPLVMLSAFKESFYRRYGWATFYEARQFSGAPAWFAPFRAQQAGRWVRLDESAAATAELDAAYRSALRGRFGPLERNAVWWQTRVLHAGDGSPHWAYLWRDDAGHGRSYAIFSIERGERGQELHCREAAALDPQARAQIFALFSMFEDQCVDVIFTAPADAPVQALMSDPLRCAMVPGAMLRMIDVAMAMEAYSFPRDVAGRLTIRITDDWLDHNNGVFALDVEGGSARMTRLSDGVDADIHCDVRTLTQVYSRYLRPRTAAAFGLIDARSRPALALVERLFVGLAPYASDWF
>NC_009767.1|WP_012120848.1|3019878_3020916_-|glycosyltransferase-family-4-protein
MVRPLYISPVGRGGVDFGIQNITRAVRRYGAPRAELLRLPEIYNFLPILIPRGLPRGWWRGFDLIQGRSRVAFALRAPGRPLVTTVHHLTTDPDLQPYSTPAQRLFYRLIEARYDWWSISSADAVVCVSRYTQQQVARAYGYTNTTVIYDGIDTDVFVPPPDMQRRNDGLPDCDGRIRLLFVGNRTRRKGFDLLPRIMNLLPEAYVLYYTSGFQDVDEGPPHPRMVPIGAPDRDGLVAAYQSCDILLAPSRLEGFGIVQAEALACGRPVVTTRISALPEVVDHERSGFLCPRDDVAAYAEAVQRLGEDEALRRRFGEYGREKVARSFGFEQLGRGFLDLYERLVR
>NC_009767.1|WP_012120847.1|3018835_3019615_-|DUF4397-domain-containing-protein
MRSKSWILLLLGALIALAVAPAAFAQVATAKVRVIHASPDAPAVDVIVNGNRALTNVPFFAASAYLDLPAGSYDIQVVPAGATSPVVIDAKGVRIEAGKAYTIAATGKLAEIKPTILMDDLTAPAAGKAHVRVIHFSPDAPAVDIKVAGGPTLISNLAFPNASNYLPVDAGSYDLQVTPAGGTAVVLDLKGTRLEAGKIYDVFAVGELANIKVEVAVTTPAAAPAALPRTGGETGIAMWALVAAMALIGAGLVMRRRVA
>NC_009767.1|WP_157042634.1|3018266_3018518_+|hypothetical-protein
MNITTRMGDLYNSVRVVCEHNYHSIELSDWKSLLNAPGFLGASRIVLSQAIAEHLPAGVSPATAAASRPLARGLADLYNTNDD
>NC_009767.1|WP_012120846.1|3017944_3018286_-|LapA-family-protein
MRVVMFILMTVLSVMLVLFGVQNPQPVEVRFLMFTSGPISLSLVMILAVIAGATLVGLFTGYSGIRHSLRERRLSKAQAALEQRIAQLEKENEQLRAKAPSRQEPVSQKNSQG
>NC_009767.1|WP_012120845.1|3017317_3017845_-|DNA-starvation/stationary-phase-protection-protein
MSAEIGTGRITTTPKPDIGLSETSIQGVTAILSRLLADEHVLYTRLRNYHWNLVGMAFGPLHALFQQQYEALADDIDDIAERIRMLGPAAPGTMTEFLQLATLAEHPGDLPDERGMVRQLVADHEAIIRHLRQDLRACDEQYDDMGTSDFLTTLMEKHEKMAWMLRAHIEERNQG
>NC_009767.1|WP_041330690.1|3016830_3017232_+|hypothetical-protein
MELTTIIQVTPGRLIGLAPDGDLRLVWDYTTIRIPVFDLPHLAALLDLWLLEEEPPLLRRGYYRLMHSPEGGYQLWLHTAGLWLSHQDVHILMTLVNATVEELCRPLCRQPKAPFGLGYRKFIASPRKGHNQN
>NC_009767.1|WP_012120843.1|3014988_3016485_+|asparagine-synthase-B
MCGIAGVYRSTDGTGIERMLAWLSHRGPDGRGVVAADSGVLGHTRLAIIDLDGGRQPMEHDGALICFNGEIYNYRALRNRYLRGQALETDSDTEVLLRLYRTLGPGCVRLLEGMFAFAILDGDDLFLARDPIGIKPLYLARSGDALLFASEIKALALHADQVTTFPPGTWYHSRFGSHTYYEIAQGWPQSGMFETPDQAITAIRAVLRAAVHKRLLADVPVGVSLSGGLDSSIIALLACAELDQVETFAVGMEGSADLEAARQMARYLGTHHHEYVYTRAEMEAALPDVIYYLESADPALVRSALPNYFLARLASERVKVILTGEGADELYAGYDYMRSIASPEDLHRELETSIRELHRTNLQRADRMFMAFGVEARVPFLDVESIALALSLPSEWKQAAPGEPTKMLLRRAFADELPESIVQRPKQKFSAGAGSMYELAKVAEERFDNRTFARERQRLLHRWGYRLRNKEALYYLDTLRAVLPERLIMPEMGVSRSL
>NC_009767.1|WP_012120853.1|3031075_3031468_-|HEPN-domain-containing-protein
MSGTTELAKEWIRKGDSDLFNARLVAASTGPYDTGCFHAQQAIEKYLKAFLAFHRHSIPRTHDLEELARLCDAIEPLPELALFDLAALSDFAVQLRYDFTIWPDVRELEDAVRQAEGIRDVIMPRLKIVL
>NC_009767.1|WP_012120854.1|3031451_3031802_-|nucleotidyltransferase-domain-containing-protein
MMQESEYAYPPVTDALLHEIVRRIRTVSNPIAIILFGSHARGDARPDSDLDILIIEETSLPRHRRGAAYRRALAGVFPAKDIVVRTPAEVQKWADTPNAFITMALREGKVLYERND
>NC_009767.1|WP_012120855.1|3031883_3032648_+|CHAT-domain-containing-protein
MLFNPDPPDETRLYQNSAHAEGGGDARAENQGADATTPLAQARRTYIGSAHAEGGGNATVVNAPTPDPTARPEPATVLAVYASPPGSAPLRWERDARALRDALAPYPDRFRVEILPLATPEDVQRALLRSRPRYLHLFAHGVASGVLLDDGEDGRGWMLPYSLLAEMARHAPGLRCVLLSACDSAFAASVAGSGEPRLIAMRGQVSVDAAIAFAEGFYEAIAANEDTPIDAAFAQGLIRLKLRAPQDADKPLLT
>NC_009767.1|WP_012120856.1|3033189_3033450_+|UPF0175-family-protein
MSNERVLTIPYPDDLLLALNESEDAFAEEARLLLAVKLYEMGRISTGMAARLSGMSRVDFLFALGRFGLSPITAEDDDLDEDLRHA
>NC_009767.1|WP_012120857.1|3033442_3033937_+|DUF3368-domain-containing-protein
MPDRPRLVVTDTTPLIALALIGKLSLLSDLYGEVAAPPTVYAEAIAGAAGRIDAADIRNASCVRVQPLSDPRRADALANLDRGEAEAIALAQEINADLLIIDERLGRRSARHLGLTITGTVGILLKSKALGYIETVHPLLTMLQQRGIYLGDALVRRALEIAGE
>NC_009767.1|WP_041330695.1|3034272_3034452_+|hypothetical-protein
MTIDDAARGSFRAPRRVIPSAARNLRGVTMPDVHRELVSVVTSDRTCGHPSRSAPIRVP
>NC_009767.1|WP_157042635.1|3034821_3035088_+|hypothetical-protein
MTVHVEPVCYTRETVVEEGRKTVLIQERDGTIIRLLAPTSEVDRYRVQVDVSPEDVEQQASLFDQLIEYAFTTLRARFLEVRITTGDE
>NC_009767.1|WP_012120860.1|3035120_3036050_+|ABC-transporter-ATP-binding-protein
MSSPDIQRLAARTDVALEVQNAVKRFGRETAQQQPFWKRSARKPPETTVAVDHISLTVQRGEIFGLLGANGSGKSTLIRLISTLLVPDGGEIRVFGYDVQREERTVRRLINRVSVEASFFKKLSALENLMYAARLYDLPGVYARRRSVEILRSLGLSEKRLYEPLEHMSRGMQQKVAIARGLLTSPVLLLLDEPTTGLDPRSKHDVQRFILRMRAEHDTTVFLTTHDMDEADRLCDRIAIIDDGRIVALDTPQGLKDAIGARNGKNGSTTMEDVFMALTGKSLDDDFESADDFESEYGNEATGGSNGAR
>NC_009767.1|WP_157042826.1|3036081_3036972_+|ribosome-small-subunit-dependent-GTPase-A
MLRAQSGFFRVETEQGIVMCTLRGRLKKERQSTDLAVIGDLVEVTPTMPGHGVIEAVLPRRTKLARRAPASKGVWKEDVLAANLDQALLVFSCASPEFSPRMLDRYLVLTETSDLDAVIVANKVDLVGEKEARRLFAPYERLEYPVLYTSAVTGLGINALRERLAGRISIVTGRSGVGKSSLFNVVQPGLGLKVGSVSAALNKGRHTTRVAELIPLDLPGGGYLADTPGIRELGLWRFPKDELARCFREFRPYLGECYFAGCTHIHEPDCAVRAALARGEITPERYDSYVRLFEGE
>NC_009767.1|WP_012120862.1|3037143_3037746_+|GNAT-family-N-acetyltransferase
METNQTDGGRRPEVVPGDRIFLSVLQRSDLLLFARWFSDLELTLYVGQPGMANTLEQEEEWYERAARQRDAKTFAIIVRDGQQMIGTVSLTDIDQRRQRAALGIAIGDKGAWNKGYGSEAVRLMCAYGFAFLNLYTVYLWVLGYNLRAHQAYLKSGFREVGRLRGGILFDGRRYEDILMEITRDEFGPSNLTHLIQQIAS

Crispr_ID: NC_009767_58

• CRISPR_ID: NC_009767_58
• CRISPR_location: 3032727-3032869
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_58

Consensus_repeat	Method
ATAGGACACGGATGAGCGCGGGTGCGACGGATAAGCGCGGATTTGTC	CRISPRCasFinder

spacers of NC_009767_58

>58.1|3032774|49|NC_009767|CRISPRCasFinder
GGAGGTGACAAGCGACCGCATCCGTGGGCATCCGTCCCGATCCGCGCTC

CRISPR arrays and Neighbor proteins around NC_009767_58

CRISPR arrays

The CRISPR arrays of NC_009767_58

>merge|NC_009767|58|3032727-3032869|CRISPRCasFinder
ATAGGACACGGATGAGCGCGGGTGCGACGGATAAGCGCGGATTTGTCGGAGGTGACAAGCGACCGCATCCGTGGGCATCCGTCCCGATCCGCGCTCATAGGACACGGATGAGCGCGGGTGCGACGGATAAGCGCGGATTTGTC

>NC_009767|58|49|3032727-3032869|CRISPRCasFinder
ATAGGACACGGATGAGCGCGGGTGCGACGGATAAGCGCGGATTTGTC	GGAGGTGACAAGCGACCGCATCCGTGGGCATCCGTCCCGATCCGCGCTC
ATAGGACACGGATGAGCGCGGGTGCGACGGATAAGCGCGGATTTGTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120864.1|3039416_3040775_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379240
NC_009767.1|WP_012120856.1|3033189_3033450_+|UPF0175-family-protein	unknown	unknown	gnl|CDD|377095
NC_009767.1|WP_012120847.1|3018835_3019615_-|DUF4397-domain-containing-protein	unknown	unknown	gnl|CDD|379570
NC_009767.1|WP_157042634.1|3018266_3018518_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120860.1|3035120_3036050_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009767.1|WP_012120855.1|3031883_3032648_+|CHAT-domain-containing-protein	unknown	unknown	gnl|CDD|378942
NC_009767.1|WP_012120857.1|3033442_3033937_+|DUF3368-domain-containing-protein	unknown	unknown	gnl|CDD|225269
NC_009767.1|WP_012120862.1|3037143_3037746_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NC_009767.1|WP_012120850.1|3022379_3023483_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_009767.1|WP_012120863.1|3037749_3038610_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223912
NC_009767.1|WP_012120865.1|3042808_3043939_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|378925
NC_009767.1|WP_012120851.1|3023824_3024859_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|132489
NC_009767.1|WP_041330695.1|3034272_3034452_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042826.1|3036081_3036972_+|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl|CDD|234631
NC_009767.1|WP_012120848.1|3019878_3020916_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012120846.1|3017944_3018286_-|LapA-family-protein	unknown	unknown	gnl|CDD|377648
NC_009767.1|WP_012120849.1|3020925_3022137_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|226925
NC_009767.1|WP_012120854.1|3031451_3031802_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_012120853.1|3031075_3031468_-|HEPN-domain-containing-protein	unknown	unknown	gnl|CDD|368314
NC_009767.1|WP_157042635.1|3034821_3035088_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120864.1|3039416_3040775_+|GNAT-family-N-acetyltransferase	gnl|CDD|379240	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.9748e-08
NC_009767.1|WP_012120856.1|3033189_3033450_+|UPF0175-family-protein	gnl|CDD|377095	pfam03683, UPF0175, Uncharacterized protein family (UPF0175). This family contains small proteins of unknown function.	7.72321e-24
NC_009767.1|WP_012120847.1|3018835_3019615_-|DUF4397-domain-containing-protein	gnl|CDD|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	5.1852e-39
NC_009767.1|WP_012120855.1|3031883_3032648_+|CHAT-domain-containing-protein	gnl|CDD|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	4.66664e-12
NC_009767.1|WP_012120860.1|3035120_3036050_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.10039e-84
NC_009767.1|WP_012120862.1|3037143_3037746_+|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	8.69367e-27
NC_009767.1|WP_012120857.1|3033442_3033937_+|DUF3368-domain-containing-protein	gnl|CDD|225269	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	6.41982e-34
NC_009767.1|WP_012120850.1|3022379_3023483_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.74923e-19
NC_009767.1|WP_012120863.1|3037749_3038610_+|ABC-transporter-permease	gnl|CDD|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	1.68616e-13
NC_009767.1|WP_012120865.1|3042808_3043939_-|ABC-transporter-permease	gnl|CDD|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	2.65552e-36
NC_009767.1|WP_012120851.1|3023824_3024859_+|GNAT-family-N-acetyltransferase	gnl|CDD|132489	TIGR03448, mycothiol_MshD, mycothiol synthase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	8.01341e-09
NC_009767.1|WP_157042826.1|3036081_3036972_+|ribosome-small-subunit-dependent-GTPase-A	gnl|CDD|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	6.32683e-121
NC_009767.1|WP_012120848.1|3019878_3020916_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.77621e-49
NC_009767.1|WP_012120846.1|3017944_3018286_-|LapA-family-protein	gnl|CDD|377648	pfam06305, LapA_dom, Lipopolysaccharide assembly protein A domain. This family includes a domain found in lipopolysaccharide assembly protein A (LapA). LapA functions along with LapB in the assembly of lipopolysaccharide (LPS). Domains in this family are also found in some uncharacterized bacterial proteins.	1.64092e-11
NC_009767.1|WP_012120849.1|3020925_3022137_-|GNAT-family-N-acetyltransferase	gnl|CDD|226925	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only].	2.46979e-35
NC_009767.1|WP_012120854.1|3031451_3031802_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	5.79917e-15
NC_009767.1|WP_012120853.1|3031075_3031468_-|HEPN-domain-containing-protein	gnl|CDD|368314	pfam05168, HEPN, HEPN domain.	2.51082e-23

Protein sequences

>NC_009767.1|WP_012120855.1|3031883_3032648_+|CHAT-domain-containing-protein
MLFNPDPPDETRLYQNSAHAEGGGDARAENQGADATTPLAQARRTYIGSAHAEGGGNATVVNAPTPDPTARPEPATVLAVYASPPGSAPLRWERDARALRDALAPYPDRFRVEILPLATPEDVQRALLRSRPRYLHLFAHGVASGVLLDDGEDGRGWMLPYSLLAEMARHAPGLRCVLLSACDSAFAASVAGSGEPRLIAMRGQVSVDAAIAFAEGFYEAIAANEDTPIDAAFAQGLIRLKLRAPQDADKPLLT
>NC_009767.1|WP_012120854.1|3031451_3031802_-|nucleotidyltransferase-domain-containing-protein
MMQESEYAYPPVTDALLHEIVRRIRTVSNPIAIILFGSHARGDARPDSDLDILIIEETSLPRHRRGAAYRRALAGVFPAKDIVVRTPAEVQKWADTPNAFITMALREGKVLYERND
>NC_009767.1|WP_012120853.1|3031075_3031468_-|HEPN-domain-containing-protein
MSGTTELAKEWIRKGDSDLFNARLVAASTGPYDTGCFHAQQAIEKYLKAFLAFHRHSIPRTHDLEELARLCDAIEPLPELALFDLAALSDFAVQLRYDFTIWPDVRELEDAVRQAEGIRDVIMPRLKIVL
>NC_009767.1|WP_012120851.1|3023824_3024859_+|GNAT-family-N-acetyltransferase
MLHTWKVDEGVRVRPRTRPVKGCIGIRIRPFRRTDEEYAAVAAIVARAPAGEVCDFEYSNPAALRAFDEVFASDALPRRYVAVAPDGAIIGYAHTFPTTWIAEPGGFWAAVRVLPAYRRLTIGRQLLARALGEAHAAGGLFALAQVREQLADATDFAEQTGFTEMLRSWEMLLDPRVVDVAPLQRHVARAEASGIRLTTLAAQRAVDPDWLPKLHALHFTLNRDVPLPDAPNITLEWFEQFALTCPEAFFIAMDGDRYIGESVMHPDERQPGALKQHLTGVLREYRGRGVAMALKVLTIAYAQTCGYTQISTWVESTNASMLAINERLGFTRHPGLVVYRQDLT
>NC_009767.1|WP_012120850.1|3022379_3023483_-|class-I-SAM-dependent-methyltransferase
MVPYDLYRLLRCPTCGSRDLIVTDGGVACAACHAEYPRRNGYLDLMPRGVEFGYVSKYVSEEEELAHELDYRDLAPPLLAAGVRNRALRRLLDLRPTDIVLDSGCGNGRFAAWNANRVRLMVGVDPATLFADEAIKTVALVQGDARRLPFADGMFDKAFSIDVLEHFPRDVIDAYLSETARVLRPGGRFLVFSNTREPSRLQPLVEASRWLGRQFVRAGVYDFEREARRKSDHIKALATWEDVLEAMRHAGLRPVRVVFWNSVATSFVEHVLMKLGEAVVGRSRREAPHRAAAASTDDGAPIGEGTAREIRARQRMRARLQRRGPVYYALLAVTLFMELDLWLFGRARSGSYFIVVEKPEVRRLIED
>NC_009767.1|WP_012120849.1|3020925_3022137_-|GNAT-family-N-acetyltransferase
MSSAGDDLSYRVVAPDDEQFALNAALAYNRPTGETHRAQRTPSPEARRGLYRDGRLVTQCVLLPLRIAHGGGGTVPVGGIGAVATPPEERRRGYVARLLREVCDELRSQRAPLVMLSAFKESFYRRYGWATFYEARQFSGAPAWFAPFRAQQAGRWVRLDESAAATAELDAAYRSALRGRFGPLERNAVWWQTRVLHAGDGSPHWAYLWRDDAGHGRSYAIFSIERGERGQELHCREAAALDPQARAQIFALFSMFEDQCVDVIFTAPADAPVQALMSDPLRCAMVPGAMLRMIDVAMAMEAYSFPRDVAGRLTIRITDDWLDHNNGVFALDVEGGSARMTRLSDGVDADIHCDVRTLTQVYSRYLRPRTAAAFGLIDARSRPALALVERLFVGLAPYASDWF
>NC_009767.1|WP_012120848.1|3019878_3020916_-|glycosyltransferase-family-4-protein
MVRPLYISPVGRGGVDFGIQNITRAVRRYGAPRAELLRLPEIYNFLPILIPRGLPRGWWRGFDLIQGRSRVAFALRAPGRPLVTTVHHLTTDPDLQPYSTPAQRLFYRLIEARYDWWSISSADAVVCVSRYTQQQVARAYGYTNTTVIYDGIDTDVFVPPPDMQRRNDGLPDCDGRIRLLFVGNRTRRKGFDLLPRIMNLLPEAYVLYYTSGFQDVDEGPPHPRMVPIGAPDRDGLVAAYQSCDILLAPSRLEGFGIVQAEALACGRPVVTTRISALPEVVDHERSGFLCPRDDVAAYAEAVQRLGEDEALRRRFGEYGREKVARSFGFEQLGRGFLDLYERLVR
>NC_009767.1|WP_012120847.1|3018835_3019615_-|DUF4397-domain-containing-protein
MRSKSWILLLLGALIALAVAPAAFAQVATAKVRVIHASPDAPAVDVIVNGNRALTNVPFFAASAYLDLPAGSYDIQVVPAGATSPVVIDAKGVRIEAGKAYTIAATGKLAEIKPTILMDDLTAPAAGKAHVRVIHFSPDAPAVDIKVAGGPTLISNLAFPNASNYLPVDAGSYDLQVTPAGGTAVVLDLKGTRLEAGKIYDVFAVGELANIKVEVAVTTPAAAPAALPRTGGETGIAMWALVAAMALIGAGLVMRRRVA
>NC_009767.1|WP_157042634.1|3018266_3018518_+|hypothetical-protein
MNITTRMGDLYNSVRVVCEHNYHSIELSDWKSLLNAPGFLGASRIVLSQAIAEHLPAGVSPATAAASRPLARGLADLYNTNDD
>NC_009767.1|WP_012120846.1|3017944_3018286_-|LapA-family-protein
MRVVMFILMTVLSVMLVLFGVQNPQPVEVRFLMFTSGPISLSLVMILAVIAGATLVGLFTGYSGIRHSLRERRLSKAQAALEQRIAQLEKENEQLRAKAPSRQEPVSQKNSQG
>NC_009767.1|WP_012120856.1|3033189_3033450_+|UPF0175-family-protein
MSNERVLTIPYPDDLLLALNESEDAFAEEARLLLAVKLYEMGRISTGMAARLSGMSRVDFLFALGRFGLSPITAEDDDLDEDLRHA
>NC_009767.1|WP_012120857.1|3033442_3033937_+|DUF3368-domain-containing-protein
MPDRPRLVVTDTTPLIALALIGKLSLLSDLYGEVAAPPTVYAEAIAGAAGRIDAADIRNASCVRVQPLSDPRRADALANLDRGEAEAIALAQEINADLLIIDERLGRRSARHLGLTITGTVGILLKSKALGYIETVHPLLTMLQQRGIYLGDALVRRALEIAGE
>NC_009767.1|WP_041330695.1|3034272_3034452_+|hypothetical-protein
MTIDDAARGSFRAPRRVIPSAARNLRGVTMPDVHRELVSVVTSDRTCGHPSRSAPIRVP
>NC_009767.1|WP_157042635.1|3034821_3035088_+|hypothetical-protein
MTVHVEPVCYTRETVVEEGRKTVLIQERDGTIIRLLAPTSEVDRYRVQVDVSPEDVEQQASLFDQLIEYAFTTLRARFLEVRITTGDE
>NC_009767.1|WP_012120860.1|3035120_3036050_+|ABC-transporter-ATP-binding-protein
MSSPDIQRLAARTDVALEVQNAVKRFGRETAQQQPFWKRSARKPPETTVAVDHISLTVQRGEIFGLLGANGSGKSTLIRLISTLLVPDGGEIRVFGYDVQREERTVRRLINRVSVEASFFKKLSALENLMYAARLYDLPGVYARRRSVEILRSLGLSEKRLYEPLEHMSRGMQQKVAIARGLLTSPVLLLLDEPTTGLDPRSKHDVQRFILRMRAEHDTTVFLTTHDMDEADRLCDRIAIIDDGRIVALDTPQGLKDAIGARNGKNGSTTMEDVFMALTGKSLDDDFESADDFESEYGNEATGGSNGAR
>NC_009767.1|WP_157042826.1|3036081_3036972_+|ribosome-small-subunit-dependent-GTPase-A
MLRAQSGFFRVETEQGIVMCTLRGRLKKERQSTDLAVIGDLVEVTPTMPGHGVIEAVLPRRTKLARRAPASKGVWKEDVLAANLDQALLVFSCASPEFSPRMLDRYLVLTETSDLDAVIVANKVDLVGEKEARRLFAPYERLEYPVLYTSAVTGLGINALRERLAGRISIVTGRSGVGKSSLFNVVQPGLGLKVGSVSAALNKGRHTTRVAELIPLDLPGGGYLADTPGIRELGLWRFPKDELARCFREFRPYLGECYFAGCTHIHEPDCAVRAALARGEITPERYDSYVRLFEGE
>NC_009767.1|WP_012120862.1|3037143_3037746_+|GNAT-family-N-acetyltransferase
METNQTDGGRRPEVVPGDRIFLSVLQRSDLLLFARWFSDLELTLYVGQPGMANTLEQEEEWYERAARQRDAKTFAIIVRDGQQMIGTVSLTDIDQRRQRAALGIAIGDKGAWNKGYGSEAVRLMCAYGFAFLNLYTVYLWVLGYNLRAHQAYLKSGFREVGRLRGGILFDGRRYEDILMEITRDEFGPSNLTHLIQQIAS
>NC_009767.1|WP_012120863.1|3037749_3038610_+|ABC-transporter-permease
MTTFSARRGGALGRELRGAYAFIERNANLIKRYWAWELVWLAYSIVNALSITFIGRASGEITGATIAPEQVNTFILFLLVGTLVWHYLSVVFDLISESIQWERWEGTIEYTFMAPISRLTHLFGQAAFAVLFAVLHTAIILAVVAAFFRIDLTRADFGAMLVVLIAGSTSFIGLGMFAAILPLLSPEKGLQMTNIIKAMVLLVSGVYYPISVLPEWLQPLAYISPATYMLDGIRAALLEGAGIEALWSGRILPLLLTGLLTIPTGLMAFMRAERYAKATGRLKRNG
>NC_009767.1|WP_012120864.1|3039416_3040775_+|GNAT-family-N-acetyltransferase
MATTIKDLGNGLIARWSTAADQERIATLFGHVFRRTADDPPNERMIAYVHHQMSGQHPLIGPNDVALVEDTRSGMVVAATAVMRQRWEYAGIPFTLSRAEPVAAHEEYRNRGLVRATFDLMHARSAEQGDLAQCITGIPYFYRQFGYEFAVDLGGSRAVMLAAIPEAKEGQAEPFMVRDATLDDLPQIRMLYERERSRLAGGLPILVSASFDHDHWRWTLTGQTAEAGEGWNTHMIIRPDGQTIGYVLTGRVRWSPEKVRILGMMVEPGAPLTAVMPPVLRALRAMAPSIPVIPPKPGEPRQLVFVLGASHPVYDALGRDLIARSEPPYGWYVRVPNVPLFLRHIRAVLERRLAGSFLAGYTGELKIDFFKGGLRMVFEEGRIAFIEPWQAPIYGDETSACFPPLVFLQLLFGRRSLEELRAWHDDVWADDEPAMLLNSLFPKQQSWVLPLD
>NC_009767.1|WP_012120865.1|3042808_3043939_-|ABC-transporter-permease
MSRMLPIIRKEFIHILRDRRALMIAFLTPVIQMIILGYAATTDVRNVPLAIFDQDRSHQSRALITAFVQSGQFTAHAYVKSEQELAALIDSGQARAGLVVPPEYGRAVTAGRNADILFILDGSDPSVASSALASARLIGASLATGVREEMLARRGATLATMPGAPQVRERVWYNPDMDSAVFMVPGLIGLVLQFQATLLTASAVVRERERGTIEQLIVTPIRPYELMVGKILPYAVVELLVVGEVLLVGTLWFGVPIRGSLLLLVAIACLFLVSTLALGLLISTIARTQFEAFQLSFLTLLPSVFISGFIYPIDAMPAALQLISKVIPLTYFLVVVRGIIIKGVGIEALLPQIMALTAFGVALLTIASLRFRKRLD

Crispr_ID: NC_009767_59

• CRISPR_ID: NC_009767_59
• CRISPR_location: 3046671-3046825
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csa3

Consensus repeat of NC_009767_59

Consensus_repeat	Method
GCGGTATCTGCCGTTTGGTCCCGCCAGCATCGAAGACGTGCCGGAGCATCTGGC	CRISPRCasFinder

spacers of NC_009767_59

>59.1|3046725|47|NC_009767|CRISPRCasFinder
ACGCAGGCGCTGCTCAACGACGAACCGTGCCACGCCACGTTTCTCTA

CRISPR arrays and Neighbor proteins around NC_009767_59

CRISPR arrays

The CRISPR arrays of NC_009767_59

>merge|NC_009767|59|3046671-3046825|CRISPRCasFinder
GCGGTATCTGCCGTTTGGTCCCGCCAGCATCGAAGACGTGCCGGAGCATCTGGCACGCAGGCGCTGCTCAACGACGAACCGTGCCACGCCACGTTTCTCTAGCGGTATCTGCCGTTTGGTCCCGCCAGCATCGAAGACGTGCCGGAGCATCTGGC

>NC_009767|59|50|3046671-3046825|CRISPRCasFinder
GCGGTATCTGCCGTTTGGTCCCGCCAGCATCGAAGACGTGCCGGAGCATCTGGC	ACGCAGGCGCTGCTCAACGACGAACCGTGCCACGCCACGTTTCTCTA
GCGGTATCTGCCGTTTGGTCCCGCCAGCATCGAAGACGTGCCGGAGCATCTGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120864.1|3039416_3040775_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379240
NC_009767.1|WP_012120872.1|3052066_3052678_-|flavin-reductase-family-protein	unknown	unknown	gnl|CDD|224766
NC_009767.1|WP_012120869.1|3049632_3050049_+|c-type-cytochrome	unknown	unknown	gnl|CDD|226005
NC_009767.1|WP_012120865.1|3042808_3043939_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|378925
NC_009767.1|WP_012120866.1|3043951_3045187_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NC_009767.1|WP_012120860.1|3035120_3036050_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009767.1|WP_157042826.1|3036081_3036972_+|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl|CDD|234631
NC_009767.1|WP_012120873.1|3052833_3053814_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|238017
NC_009767.1|WP_041330700.1|3059332_3059668_-|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|238042
NC_009767.1|WP_012120871.1|3051212_3051983_-|ParA-family-protein	unknown	unknown	gnl|CDD|224113
NC_009767.1|WP_012120877.1|3057304_3059119_-|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl|CDD|223732
NC_009767.1|WP_012120868.1|3047441_3049628_+|serine-carboxypeptidase	unknown	unknown	gnl|CDD|227632
NC_009767.1|WP_012120863.1|3037749_3038610_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223912
NC_009767.1|WP_012120862.1|3037143_3037746_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NC_009767.1|WP_012120876.1|3056126_3057278_+|oligogalacturonide-lyase	unknown	unknown	gnl|CDD|291262
NC_009767.1|WP_041330697.1|3045254_3046241_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|312075
NC_009767.1|WP_012120874.1|3053810_3054239_+|EVE-domain-containing-protein	unknown	unknown	gnl|CDD|376640
NC_009767.1|WP_012120870.1|3050151_3051210_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|184875
NC_009767.1|WP_041330695.1|3034272_3034452_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042635.1|3034821_3035088_+|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_041330700.1|3059332_3059668_-|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	5.9e-15	50.4	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120864.1|3039416_3040775_+|GNAT-family-N-acetyltransferase	gnl|CDD|379240	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.9748e-08
NC_009767.1|WP_012120872.1|3052066_3052678_-|flavin-reductase-family-protein	gnl|CDD|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	7.81842e-35
NC_009767.1|WP_012120865.1|3042808_3043939_-|ABC-transporter-permease	gnl|CDD|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	2.65552e-36
NC_009767.1|WP_012120866.1|3043951_3045187_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	9.28299e-53
NC_009767.1|WP_012120860.1|3035120_3036050_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.10039e-84
NC_009767.1|WP_157042826.1|3036081_3036972_+|ribosome-small-subunit-dependent-GTPase-A	gnl|CDD|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	6.32683e-121
NC_009767.1|WP_012120873.1|3052833_3053814_+|FHA-domain-containing-protein	gnl|CDD|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	0.000424019
NC_009767.1|WP_041330700.1|3059332_3059668_-|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	6.64229e-17
NC_009767.1|WP_012120871.1|3051212_3051983_-|ParA-family-protein	gnl|CDD|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	5.9659e-70
NC_009767.1|WP_012120877.1|3057304_3059119_-|SulP-family-inorganic-anion-transporter	gnl|CDD|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	2.02021e-134
NC_009767.1|WP_012120868.1|3047441_3049628_+|serine-carboxypeptidase	gnl|CDD|227632	COG5322, COG5322, Predicted dehydrogenase [General function prediction only].	2.16968e-37
NC_009767.1|WP_012120863.1|3037749_3038610_+|ABC-transporter-permease	gnl|CDD|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	1.68616e-13
NC_009767.1|WP_012120862.1|3037143_3037746_+|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	8.69367e-27
NC_009767.1|WP_012120876.1|3056126_3057278_+|oligogalacturonide-lyase	gnl|CDD|291262	pfam14583, Pectate_lyase22, Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers.	5.50551e-47
NC_009767.1|WP_041330697.1|3045254_3046241_-|PAS-domain-containing-protein	gnl|CDD|312075	pfam08448, PAS_4, PAS fold. The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya.	4.99982e-07
NC_009767.1|WP_012120874.1|3053810_3054239_+|EVE-domain-containing-protein	gnl|CDD|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	2.68312e-54
NC_009767.1|WP_012120870.1|3050151_3051210_-|alpha/beta-hydrolase	gnl|CDD|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	1.8471e-32
NC_009767.1|WP_012120869.1|3049632_3050049_+|c-type-cytochrome	gnl|CDD|226005	COG3474, COG3474, Cytochrome c2 [Energy production and conversion].	1.40523e-08

Protein sequences

>NC_009767.1|WP_041330697.1|3045254_3046241_-|PAS-domain-containing-protein
MDIADLSQLSSADALELVSRLHQTNEQLQGSAVTLSRLSVALQESLGPTPAGAIGALQAIGQFLTVQHSYEELATLVHQQSVEVFGMDGGSLFLLDESDVLTPIAPSDAALPNPSALEHIAELARRALDAKAMISAPGASGAYPACIVLPLSRMGQDVGVAALYRTAPEEPALSADMWANLTIYAGALGAICAGMRQAEALRRNARLLESLLAERARQVQNSRDILRVVFDHLPEGVLLLDHDDVVLAVNRFFADRIAGVHPRELVGRSYADLRQRLHLRGMQRVAQDDEGRAEVTLPDAGGRLHTFEVERTAMQTDDGATLEFWRER
>NC_009767.1|WP_012120866.1|3043951_3045187_-|serine-hydrolase
MSDVTATPESVGLSSERLERIRPAMQRWIDRGTIAGASMMLARRGKIVYAEQVGRMSKESDEALRSDAVFRIYSMTKPIVCTALMTLYEEGRFQLITPLATFIPAFANIKVLQQDKEVAPQRPITIGDLMTHLGGFTYDFLIDSPVGELYRQHALMHDANRTLEQLVAELARLPLAFHPGSKWHYSVSIDVAAHVIEIIANQPLRQFLRERIFDPLGMVDTDFGVPPEKRHRLAAMYGVGDLGARGMTVLQMFLNWQQGILERIDPQESYPVDRPETFARGGHGLFSTTQDYMRFALMLANGGELDGVRILGRKTLELMHANHIPAALLPWEIAGLTYPGYGFGLGSRVLMDVGLSGMPGTVGEFGWAGAATTYYWVDPAESFVGVFMTQYQGIDEPQRDFRVLAYQAMVE
>NC_009767.1|WP_012120865.1|3042808_3043939_-|ABC-transporter-permease
MSRMLPIIRKEFIHILRDRRALMIAFLTPVIQMIILGYAATTDVRNVPLAIFDQDRSHQSRALITAFVQSGQFTAHAYVKSEQELAALIDSGQARAGLVVPPEYGRAVTAGRNADILFILDGSDPSVASSALASARLIGASLATGVREEMLARRGATLATMPGAPQVRERVWYNPDMDSAVFMVPGLIGLVLQFQATLLTASAVVRERERGTIEQLIVTPIRPYELMVGKILPYAVVELLVVGEVLLVGTLWFGVPIRGSLLLLVAIACLFLVSTLALGLLISTIARTQFEAFQLSFLTLLPSVFISGFIYPIDAMPAALQLISKVIPLTYFLVVVRGIIIKGVGIEALLPQIMALTAFGVALLTIASLRFRKRLD
>NC_009767.1|WP_012120864.1|3039416_3040775_+|GNAT-family-N-acetyltransferase
MATTIKDLGNGLIARWSTAADQERIATLFGHVFRRTADDPPNERMIAYVHHQMSGQHPLIGPNDVALVEDTRSGMVVAATAVMRQRWEYAGIPFTLSRAEPVAAHEEYRNRGLVRATFDLMHARSAEQGDLAQCITGIPYFYRQFGYEFAVDLGGSRAVMLAAIPEAKEGQAEPFMVRDATLDDLPQIRMLYERERSRLAGGLPILVSASFDHDHWRWTLTGQTAEAGEGWNTHMIIRPDGQTIGYVLTGRVRWSPEKVRILGMMVEPGAPLTAVMPPVLRALRAMAPSIPVIPPKPGEPRQLVFVLGASHPVYDALGRDLIARSEPPYGWYVRVPNVPLFLRHIRAVLERRLAGSFLAGYTGELKIDFFKGGLRMVFEEGRIAFIEPWQAPIYGDETSACFPPLVFLQLLFGRRSLEELRAWHDDVWADDEPAMLLNSLFPKQQSWVLPLD
>NC_009767.1|WP_012120863.1|3037749_3038610_+|ABC-transporter-permease
MTTFSARRGGALGRELRGAYAFIERNANLIKRYWAWELVWLAYSIVNALSITFIGRASGEITGATIAPEQVNTFILFLLVGTLVWHYLSVVFDLISESIQWERWEGTIEYTFMAPISRLTHLFGQAAFAVLFAVLHTAIILAVVAAFFRIDLTRADFGAMLVVLIAGSTSFIGLGMFAAILPLLSPEKGLQMTNIIKAMVLLVSGVYYPISVLPEWLQPLAYISPATYMLDGIRAALLEGAGIEALWSGRILPLLLTGLLTIPTGLMAFMRAERYAKATGRLKRNG
>NC_009767.1|WP_012120862.1|3037143_3037746_+|GNAT-family-N-acetyltransferase
METNQTDGGRRPEVVPGDRIFLSVLQRSDLLLFARWFSDLELTLYVGQPGMANTLEQEEEWYERAARQRDAKTFAIIVRDGQQMIGTVSLTDIDQRRQRAALGIAIGDKGAWNKGYGSEAVRLMCAYGFAFLNLYTVYLWVLGYNLRAHQAYLKSGFREVGRLRGGILFDGRRYEDILMEITRDEFGPSNLTHLIQQIAS
>NC_009767.1|WP_157042826.1|3036081_3036972_+|ribosome-small-subunit-dependent-GTPase-A
MLRAQSGFFRVETEQGIVMCTLRGRLKKERQSTDLAVIGDLVEVTPTMPGHGVIEAVLPRRTKLARRAPASKGVWKEDVLAANLDQALLVFSCASPEFSPRMLDRYLVLTETSDLDAVIVANKVDLVGEKEARRLFAPYERLEYPVLYTSAVTGLGINALRERLAGRISIVTGRSGVGKSSLFNVVQPGLGLKVGSVSAALNKGRHTTRVAELIPLDLPGGGYLADTPGIRELGLWRFPKDELARCFREFRPYLGECYFAGCTHIHEPDCAVRAALARGEITPERYDSYVRLFEGE
>NC_009767.1|WP_012120860.1|3035120_3036050_+|ABC-transporter-ATP-binding-protein
MSSPDIQRLAARTDVALEVQNAVKRFGRETAQQQPFWKRSARKPPETTVAVDHISLTVQRGEIFGLLGANGSGKSTLIRLISTLLVPDGGEIRVFGYDVQREERTVRRLINRVSVEASFFKKLSALENLMYAARLYDLPGVYARRRSVEILRSLGLSEKRLYEPLEHMSRGMQQKVAIARGLLTSPVLLLLDEPTTGLDPRSKHDVQRFILRMRAEHDTTVFLTTHDMDEADRLCDRIAIIDDGRIVALDTPQGLKDAIGARNGKNGSTTMEDVFMALTGKSLDDDFESADDFESEYGNEATGGSNGAR
>NC_009767.1|WP_157042635.1|3034821_3035088_+|hypothetical-protein
MTVHVEPVCYTRETVVEEGRKTVLIQERDGTIIRLLAPTSEVDRYRVQVDVSPEDVEQQASLFDQLIEYAFTTLRARFLEVRITTGDE
>NC_009767.1|WP_041330695.1|3034272_3034452_+|hypothetical-protein
MTIDDAARGSFRAPRRVIPSAARNLRGVTMPDVHRELVSVVTSDRTCGHPSRSAPIRVP
>NC_009767.1|WP_012120868.1|3047441_3049628_+|serine-carboxypeptidase
MKRVLIIHPGEGDMVSPVTFLNQDVEVRRIGCGGDIARARALIAEYDGAVDAIGLDGMPAILRLGAAQVQHVIGADLPAVARVTPVVDGSGVRPELERWGIILAERAHPLIFNQKRVLFVPGVNHEGLAQALGRRTPALRFADPQIFFGLPDAPGVGSAQTLDQAAAPTLEALKEASFETLAGLVGAPHHPGSFVWADILAGNIAAIRRFAPERLDRKMVIVEAASDEDIADLRARGVETLITLMPSLSGKGEVARHSATTIEALLAALRPDPRAPLTEDTYLDLLANLDWAPAVVTLQPEAAGVNKFAFVIHPLSVRFIHDYPPFYWTRYIPDTIVEAAAAYVPPIYVGKITGGRSPTTGQRIEGYLISLGATPRQMMKHSPRFTYNLLNQAAHLAERLGARIMGLGAFTSVVGDAGITVANEADIAITSGNSLTVAATLETAKIAARMMGYKDLSRGRIMVIGATGSIGSACARLAAQATKDVVLVSIEPEKLIDLKRLIERETPGSRVVISTHANSLAGECDLIITATSAFGQRVLDVTECKPGAIICDVARPPDINPAEAALRPDVLVIESGEVLIPGDVEIGYDIGLPPRTVYACLAETSLLAMEGRFEDYTLGRNISPERVKEIYRLFRKHGYRLAPLRSFEEYITEEQIMHKRRLAEELRADPDLFARRKAEAKERLKSIPEMAKGVRAARRGKHSAAWGWAGVGAVALSLIALRRQARMP
>NC_009767.1|WP_012120869.1|3049632_3050049_+|c-type-cytochrome
MQPLIRMTIGVALVLGALLLAANTLGRPPAAPASGPIAGDATRGQIVFERAGCSACHTTTTEFRVGTGMAGVLQPEGPVYPPGVNYGGLLPNGAPRTEENVAAFIRATNQGQIGIMPGRALSDQQMADLIAYLRTLTR
>NC_009767.1|WP_012120870.1|3050151_3051210_-|alpha/beta-hydrolase
MSAEHPSDKQLPIRRGQGLRLSVTSHDADIPTPEASDETLRRGQGLRLSTHDSPAAPSTLLRELIGAPQVVELSHGPLAYRAAGHGPPLILLHGWAASSRYWLITLAALSADFRVYALDLPGFGDSPALPEPGTVARQAQTVLEFADALGLATFDINGHSYGGAVAVALAAAQPQRVRRLVITALGVIGDEFERLIFATARAPLDLTLRLGYPWLNLIAPWVELWRPFATALLCIPPLPQMIAARFIENGLREKWMLQEGIVDLTKMDLRAHLMAMASVGDPQVFDAFRAAPQPTLLIGGVGDKIMPPEALRAAAQTMRQARLAFIEQCGHIPMIEQPEAYHAALRSFLVEG
>NC_009767.1|WP_012120871.1|3051212_3051983_-|ParA-family-protein
MGLIIALAMQKGGVGKTTTALSLGVALAARERRVLLIDIDPQANLTQGLGVDPSQLEYSVYEVLLNPERGSVFATITTDDGVDLIPSSLLLAGAELELAGRVGRELLLRKALRTTRDAYDYILIDPPPSLGLFSLNALAAAQHVLVPLQLHAYALKAMPQLEQTIDLVREINPDLAIGGVLCTLADRRTNLSHEIERQVRERYGALVFQTVIPINVKLAEAPNAGMPIHRYAPGSVGAQAYNALADELELRLHHQR
>NC_009767.1|WP_012120872.1|3052066_3052678_-|flavin-reductase-family-protein
MDVVSFVPEAMPPRDAYRLLISSVVPRPIGWASTIGADGSINLAPFSFFNAVGGPIPFVMISVSRRAGATKDTLRNVTETGEMVLNIVSEELAPQMNITSGDWAYGENEFERAGLAPAPSVDVRPPRVAAAPVAMEVRVTQIVPVEGSSYTMIIGRVVRFHIRCDLLRPDGTVDPLRLNPIARLSGDEYARLGEVFTLPRPGV
>NC_009767.1|WP_012120873.1|3052833_3053814_+|FHA-domain-containing-protein
MRLRVYVGQTPDTARERIALREQALILARNARQSPTEGTCAIAFNIVAGADPPLAQIDLLILRATVVIVGALRSYAGPIDAPPGGVWRDRASGQPLLEADGAHPLHRLRRQRDAVQMSLNAAAPRLGLATAGSHPFKQVIGVLIGFPALPADSRISLDVDDHRDHLKVCSFDELPGVAAMSHSGVMLSDEVIHTIAVSLFGCRLWYDNHFLFELAPPRFQLSIHSSGSAPVLVPLYEGETIVGRRRSSEGTERRIPILNDDLVSSDHLHIICDDALNRVVIRDTSKNGTWLTPPDGPMEHVRDVERTIIVGTRLRLGMTDMILESI
>NC_009767.1|WP_012120874.1|3053810_3054239_+|EVE-domain-containing-protein
MSKRFWLLKTEPDCYAWSDLVRDGRTVWDGVANNVALKHLREMQPGDEALIYHTGDERRAVGRAEVISTPYPDPHQSDPRLIVVDVRPLAPLPRPVALADIKADPAFADFALVRQSRLSVVPVTEAQWQRLLAMAGVASSAE
>NC_009767.1|WP_012120876.1|3056126_3057278_+|oligogalacturonide-lyase
MSKGTVYPAEWRTFTDRHTGVRVTQLTSHKAHSHHLYFTNSGWYDNGRKLLFGSERFNRVNLYSLDLDDGRITQLTDLDQPPPPGETSFLFASVNPQRAEVYFWHGRDLIALDLQTLDERRIYRAPDRFLTNITNVTADGRYVCTGLYEDLSDRFTIDLLHGYVGFYEYWEARPLSQIVRIDVDSGVADVVFEENYWIGHVNTSPTLPDILTYCHEGPWQQVDNRIWGLNLENGRNWKIRPCAPGERVGHEYWFADGERIGYHGRTADGEPFYGCIRYDNADCIEAPFPADSTHFHSNDLSLIVGDGTRAFPWLLLWRFHHGAFEGPRAVAYHRGSFQVQITHVHPRFSPDGRQIVYVSDDSGYGNLHLIDTPDFDSLPLPAE
>NC_009767.1|WP_012120877.1|3057304_3059119_-|SulP-family-inorganic-anion-transporter
MLAMLKRLSLFQILQREFSTYDMAHFQRDLLAGLTVAAVGLPLALAFGVASGADAAAGLVTAILAGLIIGGLGGAGYQISGPTGAMSAVLIVLASRYGLDGVWVATVMAGIFLIALGVFRLGRYVSFIPSPVITGFTSGIALIIAIGQIDNVLGVTTPKAENALEKLWHYVTNPVVPDWHTLALAGIVMGTMILLPRVTTRIPGSLVGIMIASPLAFFAGWDVAVIGDIPRTILLSNRLTLESIPWEHLSELLPAAVSIAALGAIESLLCGTVGATMSGGEFDSNQELIGQGIGNLVIPFFGGVPATAAIARTSVAIKSGAATRLTSIIHSLALLLSALALAPLISHVPLAALGDVLLVTAWRMNEWESIHFFVRTRLRGALTGMIVTMIATAALDLTQAILIGVVISAVLYIRQSAISTSVASGPVKPEKIRAQGFDLPAACPAIHVYYLTGPVFFGSVTTVLESFETAGDYHTLIISMRGVPVVDAMGIQALQQIVEEHHHRGGKVYFSGLQPAVRSMFDRTGLTQLVGEEYIFWDAAQAIIASHQSHELDGCAKCDSRSEICDVLRAARRRHVESDEAAAPAVATDSFPSTNMTSVSSVQG
>NC_009767.1|WP_041330700.1|3059332_3059668_-|winged-helix-turn-helix-transcriptional-regulator
MNDPVRRFKAEFFKALGHPARLALLDHLRNGEKSVNELQALLRCDQSTVSQQLSVLRNRGIVEGRKEGTTVCYRVRDPAIFRLLDDAREIFNNQLITTQEMLQQLSEVNTT

Crispr_ID: NC_009767_60

• CRISPR_ID: NC_009767_60
• CRISPR_location: 3056042-3056157
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csa3

Consensus repeat of NC_009767_60

Consensus_repeat	Method
AGGAGCAATGTCTATGAGCAAAGGGACCGTCTATCCTGCCGAAT	CRISPRCasFinder

spacers of NC_009767_60

>60.1|3056086|28|NC_009767|CRISPRCasFinder
CTGGCGCTGCCGGAATTGTCTCCGGATG

CRISPR arrays and Neighbor proteins around NC_009767_60

CRISPR arrays

The CRISPR arrays of NC_009767_60

>merge|NC_009767|60|3056042-3056157|CRISPRCasFinder
AGGAGCAATGTCTATGAGCAAAGGGACCGTCTATCCTGCCGAATCTGGCGCTGCCGGAATTGTCTCCGGATGAGGAGCAATGTCTATGAGCAAAGGGACCGTCTATCCTGCCGAAT

>NC_009767|60|51|3056042-3056157|CRISPRCasFinder
AGGAGCAATGTCTATGAGCAAAGGGACCGTCTATCCTGCCGAAT	CTGGCGCTGCCGGAATTGTCTCCGGATG
AGGAGCAATGTCTATGAGCAAAGGGACCGTCTATCCTGCCGAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120872.1|3052066_3052678_-|flavin-reductase-family-protein	unknown	unknown	gnl|CDD|224766
NC_009767.1|WP_041330700.1|3059332_3059668_-|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|238042
NC_009767.1|WP_012120869.1|3049632_3050049_+|c-type-cytochrome	unknown	unknown	gnl|CDD|226005
NC_009767.1|WP_012120883.1|3063553_3066370_+|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl|CDD|234570
NC_009767.1|WP_012120870.1|3050151_3051210_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|184875
NC_009767.1|WP_012120879.1|3059940_3061215_-|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|132912
NC_009767.1|WP_012120873.1|3052833_3053814_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|238017
NC_009767.1|WP_012120880.1|3061382_3061874_-|DUF1772-domain-containing-protein	unknown	unknown	gnl|CDD|378020
NC_009767.1|WP_012120871.1|3051212_3051983_-|ParA-family-protein	unknown	unknown	gnl|CDD|224113
NC_009767.1|WP_041330702.1|3062475_3063447_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|378976
NC_009767.1|WP_012120868.1|3047441_3049628_+|serine-carboxypeptidase	unknown	unknown	gnl|CDD|227632
NC_009767.1|WP_012120881.1|3061892_3062372_-|DUF2269-family-protein	unknown	unknown	gnl|CDD|370783
NC_009767.1|WP_012120886.1|3069419_3069965_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120884.1|3066378_3067011_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042636.1|3046808_3047045_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NC_009767.1|WP_041330697.1|3045254_3046241_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|312075
NC_009767.1|WP_012120874.1|3053810_3054239_+|EVE-domain-containing-protein	unknown	unknown	gnl|CDD|376640
NC_009767.1|WP_012120885.1|3067342_3069370_+|vanomycin-resistance-protein-VanB	unknown	unknown	gnl|CDD|225341
NC_009767.1|WP_012120866.1|3043951_3045187_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NC_009767.1|WP_012120877.1|3057304_3059119_-|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl|CDD|223732

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_041330700.1|3059332_3059668_-|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	5.9e-15	50.4	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120872.1|3052066_3052678_-|flavin-reductase-family-protein	gnl|CDD|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	7.81842e-35
NC_009767.1|WP_041330700.1|3059332_3059668_-|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	6.64229e-17
NC_009767.1|WP_012120869.1|3049632_3050049_+|c-type-cytochrome	gnl|CDD|226005	COG3474, COG3474, Cytochrome c2 [Energy production and conversion].	1.40523e-08
NC_009767.1|WP_012120883.1|3063553_3066370_+|phosphoenolpyruvate-carboxylase	gnl|CDD|234570	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed.	0
NC_009767.1|WP_012120870.1|3050151_3051210_-|alpha/beta-hydrolase	gnl|CDD|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	1.8471e-32
NC_009767.1|WP_012120879.1|3059940_3061215_-|PAS-domain-S-box-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	6.66007e-44
NC_009767.1|WP_012120873.1|3052833_3053814_+|FHA-domain-containing-protein	gnl|CDD|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	0.000424019
NC_009767.1|WP_012120880.1|3061382_3061874_-|DUF1772-domain-containing-protein	gnl|CDD|378020	pfam08592, DUF1772, Domain of unknown function (DUF1772). This domain is of unknown function.	2.06423e-08
NC_009767.1|WP_012120871.1|3051212_3051983_-|ParA-family-protein	gnl|CDD|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	5.9659e-70
NC_009767.1|WP_041330702.1|3062475_3063447_+|helix-turn-helix-domain-containing-protein	gnl|CDD|378976	pfam12852, Cupin_6, Cupin. This is a family of bacterial and eukaryotic proteins that belong to the Cupin superfamily. Some of the proteins in this family are annotated as being members of the AraC family of transcription factors, in which case this domain corresponds to the ligand binding domain.	4.02338e-42
NC_009767.1|WP_012120868.1|3047441_3049628_+|serine-carboxypeptidase	gnl|CDD|227632	COG5322, COG5322, Predicted dehydrogenase [General function prediction only].	2.16968e-37
NC_009767.1|WP_012120881.1|3061892_3062372_-|DUF2269-family-protein	gnl|CDD|370783	pfam10027, DUF2269, Predicted integral membrane protein (DUF2269). Members of this family of bacterial hypothetical integral membrane proteins have no known function.	0.00916405
NC_009767.1|WP_157042636.1|3046808_3047045_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	7.99686e-11
NC_009767.1|WP_041330697.1|3045254_3046241_-|PAS-domain-containing-protein	gnl|CDD|312075	pfam08448, PAS_4, PAS fold. The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya.	4.99982e-07
NC_009767.1|WP_012120874.1|3053810_3054239_+|EVE-domain-containing-protein	gnl|CDD|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	2.68312e-54
NC_009767.1|WP_012120885.1|3067342_3069370_+|vanomycin-resistance-protein-VanB	gnl|CDD|225341	COG2720, COG2720, Uncharacterized vancomycin resistance protein [Defense mechanisms].	4.84364e-58
NC_009767.1|WP_012120866.1|3043951_3045187_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	9.28299e-53
NC_009767.1|WP_012120877.1|3057304_3059119_-|SulP-family-inorganic-anion-transporter	gnl|CDD|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	2.02021e-134

Protein sequences

>NC_009767.1|WP_012120874.1|3053810_3054239_+|EVE-domain-containing-protein
MSKRFWLLKTEPDCYAWSDLVRDGRTVWDGVANNVALKHLREMQPGDEALIYHTGDERRAVGRAEVISTPYPDPHQSDPRLIVVDVRPLAPLPRPVALADIKADPAFADFALVRQSRLSVVPVTEAQWQRLLAMAGVASSAE
>NC_009767.1|WP_012120873.1|3052833_3053814_+|FHA-domain-containing-protein
MRLRVYVGQTPDTARERIALREQALILARNARQSPTEGTCAIAFNIVAGADPPLAQIDLLILRATVVIVGALRSYAGPIDAPPGGVWRDRASGQPLLEADGAHPLHRLRRQRDAVQMSLNAAAPRLGLATAGSHPFKQVIGVLIGFPALPADSRISLDVDDHRDHLKVCSFDELPGVAAMSHSGVMLSDEVIHTIAVSLFGCRLWYDNHFLFELAPPRFQLSIHSSGSAPVLVPLYEGETIVGRRRSSEGTERRIPILNDDLVSSDHLHIICDDALNRVVIRDTSKNGTWLTPPDGPMEHVRDVERTIIVGTRLRLGMTDMILESI
>NC_009767.1|WP_012120872.1|3052066_3052678_-|flavin-reductase-family-protein
MDVVSFVPEAMPPRDAYRLLISSVVPRPIGWASTIGADGSINLAPFSFFNAVGGPIPFVMISVSRRAGATKDTLRNVTETGEMVLNIVSEELAPQMNITSGDWAYGENEFERAGLAPAPSVDVRPPRVAAAPVAMEVRVTQIVPVEGSSYTMIIGRVVRFHIRCDLLRPDGTVDPLRLNPIARLSGDEYARLGEVFTLPRPGV
>NC_009767.1|WP_012120871.1|3051212_3051983_-|ParA-family-protein
MGLIIALAMQKGGVGKTTTALSLGVALAARERRVLLIDIDPQANLTQGLGVDPSQLEYSVYEVLLNPERGSVFATITTDDGVDLIPSSLLLAGAELELAGRVGRELLLRKALRTTRDAYDYILIDPPPSLGLFSLNALAAAQHVLVPLQLHAYALKAMPQLEQTIDLVREINPDLAIGGVLCTLADRRTNLSHEIERQVRERYGALVFQTVIPINVKLAEAPNAGMPIHRYAPGSVGAQAYNALADELELRLHHQR
>NC_009767.1|WP_012120870.1|3050151_3051210_-|alpha/beta-hydrolase
MSAEHPSDKQLPIRRGQGLRLSVTSHDADIPTPEASDETLRRGQGLRLSTHDSPAAPSTLLRELIGAPQVVELSHGPLAYRAAGHGPPLILLHGWAASSRYWLITLAALSADFRVYALDLPGFGDSPALPEPGTVARQAQTVLEFADALGLATFDINGHSYGGAVAVALAAAQPQRVRRLVITALGVIGDEFERLIFATARAPLDLTLRLGYPWLNLIAPWVELWRPFATALLCIPPLPQMIAARFIENGLREKWMLQEGIVDLTKMDLRAHLMAMASVGDPQVFDAFRAAPQPTLLIGGVGDKIMPPEALRAAAQTMRQARLAFIEQCGHIPMIEQPEAYHAALRSFLVEG
>NC_009767.1|WP_012120869.1|3049632_3050049_+|c-type-cytochrome
MQPLIRMTIGVALVLGALLLAANTLGRPPAAPASGPIAGDATRGQIVFERAGCSACHTTTTEFRVGTGMAGVLQPEGPVYPPGVNYGGLLPNGAPRTEENVAAFIRATNQGQIGIMPGRALSDQQMADLIAYLRTLTR
>NC_009767.1|WP_012120868.1|3047441_3049628_+|serine-carboxypeptidase
MKRVLIIHPGEGDMVSPVTFLNQDVEVRRIGCGGDIARARALIAEYDGAVDAIGLDGMPAILRLGAAQVQHVIGADLPAVARVTPVVDGSGVRPELERWGIILAERAHPLIFNQKRVLFVPGVNHEGLAQALGRRTPALRFADPQIFFGLPDAPGVGSAQTLDQAAAPTLEALKEASFETLAGLVGAPHHPGSFVWADILAGNIAAIRRFAPERLDRKMVIVEAASDEDIADLRARGVETLITLMPSLSGKGEVARHSATTIEALLAALRPDPRAPLTEDTYLDLLANLDWAPAVVTLQPEAAGVNKFAFVIHPLSVRFIHDYPPFYWTRYIPDTIVEAAAAYVPPIYVGKITGGRSPTTGQRIEGYLISLGATPRQMMKHSPRFTYNLLNQAAHLAERLGARIMGLGAFTSVVGDAGITVANEADIAITSGNSLTVAATLETAKIAARMMGYKDLSRGRIMVIGATGSIGSACARLAAQATKDVVLVSIEPEKLIDLKRLIERETPGSRVVISTHANSLAGECDLIITATSAFGQRVLDVTECKPGAIICDVARPPDINPAEAALRPDVLVIESGEVLIPGDVEIGYDIGLPPRTVYACLAETSLLAMEGRFEDYTLGRNISPERVKEIYRLFRKHGYRLAPLRSFEEYITEEQIMHKRRLAEELRADPDLFARRKAEAKERLKSIPEMAKGVRAARRGKHSAAWGWAGVGAVALSLIALRRQARMP
>NC_009767.1|WP_157042636.1|3046808_3047045_+|GNAT-family-N-acetyltransferase
MPEHLARCMALARSHPRHGYDLAVVLRAEERVIGGCTQALLNDEPCHATFLYLFNRRYWGRGYATEAMRALFEYGFET
>NC_009767.1|WP_041330697.1|3045254_3046241_-|PAS-domain-containing-protein
MDIADLSQLSSADALELVSRLHQTNEQLQGSAVTLSRLSVALQESLGPTPAGAIGALQAIGQFLTVQHSYEELATLVHQQSVEVFGMDGGSLFLLDESDVLTPIAPSDAALPNPSALEHIAELARRALDAKAMISAPGASGAYPACIVLPLSRMGQDVGVAALYRTAPEEPALSADMWANLTIYAGALGAICAGMRQAEALRRNARLLESLLAERARQVQNSRDILRVVFDHLPEGVLLLDHDDVVLAVNRFFADRIAGVHPRELVGRSYADLRQRLHLRGMQRVAQDDEGRAEVTLPDAGGRLHTFEVERTAMQTDDGATLEFWRER
>NC_009767.1|WP_012120866.1|3043951_3045187_-|serine-hydrolase
MSDVTATPESVGLSSERLERIRPAMQRWIDRGTIAGASMMLARRGKIVYAEQVGRMSKESDEALRSDAVFRIYSMTKPIVCTALMTLYEEGRFQLITPLATFIPAFANIKVLQQDKEVAPQRPITIGDLMTHLGGFTYDFLIDSPVGELYRQHALMHDANRTLEQLVAELARLPLAFHPGSKWHYSVSIDVAAHVIEIIANQPLRQFLRERIFDPLGMVDTDFGVPPEKRHRLAAMYGVGDLGARGMTVLQMFLNWQQGILERIDPQESYPVDRPETFARGGHGLFSTTQDYMRFALMLANGGELDGVRILGRKTLELMHANHIPAALLPWEIAGLTYPGYGFGLGSRVLMDVGLSGMPGTVGEFGWAGAATTYYWVDPAESFVGVFMTQYQGIDEPQRDFRVLAYQAMVE
>NC_009767.1|WP_012120877.1|3057304_3059119_-|SulP-family-inorganic-anion-transporter
MLAMLKRLSLFQILQREFSTYDMAHFQRDLLAGLTVAAVGLPLALAFGVASGADAAAGLVTAILAGLIIGGLGGAGYQISGPTGAMSAVLIVLASRYGLDGVWVATVMAGIFLIALGVFRLGRYVSFIPSPVITGFTSGIALIIAIGQIDNVLGVTTPKAENALEKLWHYVTNPVVPDWHTLALAGIVMGTMILLPRVTTRIPGSLVGIMIASPLAFFAGWDVAVIGDIPRTILLSNRLTLESIPWEHLSELLPAAVSIAALGAIESLLCGTVGATMSGGEFDSNQELIGQGIGNLVIPFFGGVPATAAIARTSVAIKSGAATRLTSIIHSLALLLSALALAPLISHVPLAALGDVLLVTAWRMNEWESIHFFVRTRLRGALTGMIVTMIATAALDLTQAILIGVVISAVLYIRQSAISTSVASGPVKPEKIRAQGFDLPAACPAIHVYYLTGPVFFGSVTTVLESFETAGDYHTLIISMRGVPVVDAMGIQALQQIVEEHHHRGGKVYFSGLQPAVRSMFDRTGLTQLVGEEYIFWDAAQAIIASHQSHELDGCAKCDSRSEICDVLRAARRRHVESDEAAAPAVATDSFPSTNMTSVSSVQG
>NC_009767.1|WP_041330700.1|3059332_3059668_-|winged-helix-turn-helix-transcriptional-regulator
MNDPVRRFKAEFFKALGHPARLALLDHLRNGEKSVNELQALLRCDQSTVSQQLSVLRNRGIVEGRKEGTTVCYRVRDPAIFRLLDDAREIFNNQLITTQEMLQQLSEVNTT
>NC_009767.1|WP_012120879.1|3059940_3061215_-|PAS-domain-S-box-protein
MSLSATNHNTEAELSRLRQRVAELEEQLARLEASNGVATANFDMHRVLDALAVPIFYKDADGRYVGCNEAFAAFLGRDRAGIIGKTAYDLAPPHLAEVYHQADLNLMRQRTLQVYEAEVMTAQGDNRTVQFSKAPIFDAAGNVVGLIGAIQDITERKKAEQEMARLMEVLENTPDVIGMADAQGRVVYMNKAGRRLRGLSSDADLKSMQIADFHPAWAAKIIYEEAIPIADHNGYWSGDLAMVNARGEEIPVSQVLLAHHDADGKLTYVTGIMRDISERKKAERALREREVQEQVIEAQRAALRELSTPLLPISSDVVVMPIIGAVDSARAQQIMDTLLEGVSEHHASLAILDITGVKVMDTQVAGALLHAAHAVRLLGAQVVLSGIRPEIAQTLVHIGIDMRDLVTRSTLQQAIAFALERFRQ
>NC_009767.1|WP_012120880.1|3061382_3061874_-|DUF1772-domain-containing-protein
MRSIRIIHAVFTFGIGLFAGLLYTFEQGVIPALMTLTAAEYTKVEQGLIRALDAFPTGVIVVASLSMLLPLYPLVRLWKERHTLYWRLTALGWALFFFGVGVFTIVLNVPINNAVLTWDPAAPPADWANARAAWNSLNAIRTPINYLSFLLVIWAAFEAPKQP
>NC_009767.1|WP_012120881.1|3061892_3062372_-|DUF2269-family-protein
MHLPPEGAHPVIYTLLVFAHIFTTMAAVGLNASYVIWIARGTRDAASLPFALRGVKFIDDYVANPCYLVGGATGALMIVMGKAVAPFLWVAIGLYVLAMALAYGVYTPLLSQQIRTLEARGADDAEYQALARRSNQVGAAMGVLVVIILALKIFEPPLW
>NC_009767.1|WP_041330702.1|3062475_3063447_+|helix-turn-helix-domain-containing-protein
MDSLSHVLNTVRLRSSVYCRSELGSPWGLHFAPRSCAVFHALHRGNGYLCVEGDAGLLPLREGDVVLLPGGEEHSILETPDAPLFRNLELDQWGECALMRWSDAPTAVILCGTFDFEHIGTYALLKHLPRVVHIPRSENSALNSILALMASEAEAGRPAKEVALRRLADILFIQIIQRWVEIEGIERCGWFGALHDPLIGRALELIHAQPQHSWTVAALARAVACSRSFFAARFTALVGEPPMEYLRRWRLQLATHLLMDHAHVSAGDIAARIGYHSEAAFSKAFKRSLGIAPGAYRKRHSAARSSTDARDVNGIMNRNSANR
>NC_009767.1|WP_012120883.1|3063553_3066370_+|phosphoenolpyruvate-carboxylase
MSHTPHNRRHESERLSATIRFLGNLLGDVIREQAGEAAFQLVERLRTLGKELRNGAPDRADAELRMMAARMTVADIQIVIKAFNAYFLLVNLAEQMQRVWVLRDRERKYPDTPRPESIAAAIAELHACGIPATTIQEWLDTACIQPVFTAHPTEARRRTALEKVRRLATLLDERTGDLHGFVREENTMRIREEIVSLWQTDEVRVVKPTVIDEVKNGMFYFESGLFDLIPRLYRELEYALRTTYPTHEWRVPPLLRYGAWMGGDRDGNPNVTHTVTIQAVRMMRAAAIERHIAAVEELSHRLGQSVRQAPVSDELRESLAHDASLFPEVADMLARRNPYELYRQKCTYIREKLIRTLDYARTASLDWGRSDSPPKGAYFSRTDLLDDLHVMERSLLSNNAAIVANGALRDLIRQAEVFGLHTATLDIRQHSERHTAALAEVLAAAGVCADYTALNEIERIELLSREIENPRPLIPTRLDYSPDTVEVIATFRAVASILERLSPEAVETCIVSMTRGASDLLAPLLLAKEAGLFRPFRFSRLSMAPLFETGADLACCDEVLEACMRLPIYRNHLALRGFVQEVMIGYSDSNKDVGYAAANWAIYQAQRKLRDFGRRHGIQMRLFHGRGGAIGRGGGPANHAILAQPPGSIGNQIKITEQGEVIADRYGLPLLAHRHIEQVINAVLRAGLLQRDDPPDEWTQALERLAALSQRHYRALVYERSDFVPYFRNVTPIAEISRLNIGSRPASRRNTERIEDLRAIPWVFSWMQSRHTLPGWYGLGFALETFVYAGEQSDASGSAIDRLALLQEMYARWSFFRVMIDNAQMILGKADLHIASRYAELAPDQNAAAAIFAAIREEYQRASRMIRQVARIERLLDNAPVLQHSIQRRNPYIDPMSYLQIELLRRLRAAPDGPDHAAIEDAILLSISGLAAGLMNTG
>NC_009767.1|WP_012120884.1|3066378_3067011_-|hypothetical-protein
MPDNGMTELDLLVGSMFTTLPEEDRESYEAEREWLIDVQNLLRDEGVDVDLLANPGVEIWEGGIERYHDLFLLRLIAAYLENGRDITPLLAPDFEFDEEPDALLAAIWEDQQTTRFPHLIKHQGEGGYYLPVDFPEPIWIEEEPADDNEPIEESVVSFGSSIGLQRELVDLEGMLDQAGVKPEHPVRRCLSVLREAADVSIANDLPIIVW
>NC_009767.1|WP_012120885.1|3067342_3069370_+|vanomycin-resistance-protein-VanB
MSADQVHFSSTAEAAERQGFPVTTHPRVQRPRRRGDGWLWLTLAALMLLVLALAGGAAYVYRSYEGRIYPNVSIQGIAVGDMTPDQAEAALRARYAAFLRQPLIITYGDRQWTPTLDDLGMTFDFRGAVDRAYNAGRGNGLIGDVQEIAAIWQHGLEIPLRVSYDEMRAQAYLAHLAREIERAPADAQVRLDGEQVATVGSVIGRQVLVDATLSQVSQQLQSLAPATIPIQTRELPPRLDDAAVAAARSRIETILQGPLSLRVGKHEYEWTVDELAQMIVIERVPSGEGDRVVVTLDRSAIEQRLRQIADETEKPGTRPRVAWNNGDLKITKPGKPGLRLDEARARDMVLAALTGRDRTLDLPMIPTDPPVTEANLHQLGIRELVSVGKSDFTGSAAYRVHNIGVGMQLLNGLLVAPGEEFSFNKNIGQINAANGFVEGAAIIQNRTQQEFGGGICQDSTTLFRAAFWAGLPITERWGHSFYISWYDKYALGPRGNGPGLDATIFTGGPDLKFVNDTGAWLLIQAWSDPKTGVAQIELYGTKPNRTVDLTHKVYDHTPAPTEPVFVADPKVPQGTIKHTDKARGGMTIDVYRLVIENGVPRPPELFRTRFRPWPNIYTLNPADIGPDSKPLIPFPSNEQPAQPAPPVEQPTEPPPPPGVEPQPEQNSGEQPPANG
>NC_009767.1|WP_012120886.1|3069419_3069965_-|hypothetical-protein
MNTLATSDIPQADVLWHVARVPEAIIRGHTTHEAIGAYLGAKGQRQGLYYAQAARVLGLVGEPEADGTVPLTPYGRAFAQYDRSAQSTALRRLLREQEPTRSVLRAIRERGGIDYNGIAGVLRRLAPLAESTARRRAHTAAAWLIAAGLAAWRDGKLVAVSAPSERMGWAVVRRRMDSAAR

Crispr_ID: NC_009767_61

• CRISPR_ID: NC_009767_61
• CRISPR_location: 3105999-3106172
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_009767_61

Consensus_repeat	Method
TCTGCACCGGTCTCCCCTCTCCCG	CRISPRCasFinder

spacers of NC_009767_61

>61.1|3106023|55|NC_009767|CRISPRCasFinder
CAGCGCGGGCGAAGGGGGAGTTGGGGCGTCCTGACACGCGAACGAACATAACACC
>61.2|3106102|47|NC_009767|CRISPRCasFinder
TAGCACGGGAGATGCGCCGAAAATAGATATCGCACGCTGATATTGAA

CRISPR arrays and Neighbor proteins around NC_009767_61

CRISPR arrays

The CRISPR arrays of NC_009767_61

>merge|NC_009767|61|3105999-3106172|CRISPRCasFinder
TCTGCGCCGGTCTCCCCTCTCCCGCAGCGCGGGCGAAGGGGGAGTTGGGGCGTCCTGACACGCGAACGAACATAACACCTCTGCACCGGTCTCCCCTCTCCCGTAGCACGGGAGATGCGCCGAAAATAGATATCGCACGCTGATATTGAATCTGCACCGGTCTCCCCTCTCCCG

>NC_009767|61|52|3105999-3106172|CRISPRCasFinder
TCTGCGCCGGTCTCCCCTCTCCCG	CAGCGCGGGCGAAGGGGGAGTTGGGGCGTCCTGACACGCGAACGAACATAACACC
TCTGCACCGGTCTCCCCTCTCCCG	TAGCACGGGAGATGCGCCGAAAATAGATATCGCACGCTGATATTGAA
TCTGCACCGGTCTCCCCTCTCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120915.1|3104024_3104942_-|acetaldehyde-dehydrogenase-(acetylating)	unknown	unknown	gnl|CDD|236227
NC_009767.1|WP_085979079.1|3099582_3101040_-|aldehyde-dehydrogenase	unknown	unknown	gnl|CDD|143412
NC_009767.1|WP_012120909.1|3098797_3099601_-|2-hydroxypenta-2,4-dienoate-hydratase	unknown	unknown	gnl|CDD|132264
NC_009767.1|WP_012120912.1|3101754_3101967_-|2-hydroxymuconate-tautomerase-family-protein	unknown	unknown	gnl|CDD|238274
NC_009767.1|WP_012120908.1|3098583_3098784_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120927.1|3116416_3117400_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NC_009767.1|WP_012120914.1|3103017_3104028_-|4-hydroxy-2-oxovalerate-aldolase	unknown	unknown	gnl|CDD|181282
NC_009767.1|WP_012120924.1|3113062_3114172_-|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|236898
NC_009767.1|WP_012120921.1|3109545_3109920_+|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|225236
NC_009767.1|WP_012120907.1|3097144_3097669_-|type-1-glutamine-amidotransferase	unknown	unknown	gnl|CDD|153228
NC_009767.1|WP_012120926.1|3115243_3116371_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224094
NC_009767.1|WP_012120918.1|3107244_3108810_-|Pyoverdin-chromophore-biosynthetic-protein-pvcC	unknown	unknown	gnl|CDD|213700
NC_009767.1|WP_012120925.1|3114181_3115231_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223521
NC_009767.1|WP_012120920.1|3109253_3109565_+|nucleotidyltransferase-family-protein	unknown	unknown	gnl|CDD|224583
NC_009767.1|WP_012120913.1|3101979_3102525_-|flavin-reductase	unknown	unknown	gnl|CDD|376575
NC_009767.1|WP_012120922.1|3109946_3111056_+|DNA-double-strand-break-repair-nuclease-NurA	unknown	unknown	gnl|CDD|214920
NC_009767.1|WP_012120923.1|3111120_3112695_-|hypothetical-protein	unknown	unknown	gnl|CDD|373362
NC_009767.1|WP_012120916.1|3104923_3105700_-|IclR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224332
NC_009767.1|WP_012120911.1|3101036_3101771_-|4-oxalocrotonate-decarboxylase	unknown	unknown	gnl|CDD|226480
NC_009767.1|WP_012120917.1|3106210_3107218_-|catechol-2,3-dioxygenase	unknown	unknown	gnl|CDD|274480

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120915.1|3104024_3104942_-|acetaldehyde-dehydrogenase-(acetylating)	gnl|CDD|236227	PRK08300, PRK08300, acetaldehyde dehydrogenase; Validated.	0
NC_009767.1|WP_085979079.1|3099582_3101040_-|aldehyde-dehydrogenase	gnl|CDD|143412	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.	0
NC_009767.1|WP_012120909.1|3098797_3099601_-|2-hydroxypenta-2,4-dienoate-hydratase	gnl|CDD|132264	TIGR03220, 2-hydroxypenta-24-dienoate_hydratase, 2-oxopent-4-enoate hydratase. Members of this protein family are 2-oxopent-4-enoate hydratase, which is also called 2-hydroxypent-2,4-dienoate hydratase. It is closely related to another gene found in the same operon, 4-oxalocrotonate decarboxylase, with which it interacts closely.	2.30944e-87
NC_009767.1|WP_012120912.1|3101754_3101967_-|2-hydroxymuconate-tautomerase-family-protein	gnl|CDD|238274	cd00491, 4Oxalocrotonate_Tautomerase, 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.	1.33409e-13
NC_009767.1|WP_012120927.1|3116416_3117400_-|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.65504e-97
NC_009767.1|WP_012120914.1|3103017_3104028_-|4-hydroxy-2-oxovalerate-aldolase	gnl|CDD|181282	PRK08195, PRK08195, 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated.	0
NC_009767.1|WP_012120924.1|3113062_3114172_-|dipeptide-ABC-transporter-ATP-binding-protein	gnl|CDD|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	2.40632e-150
NC_009767.1|WP_012120921.1|3109545_3109920_+|DUF86-domain-containing-protein	gnl|CDD|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	1.67304e-24
NC_009767.1|WP_012120907.1|3097144_3097669_-|type-1-glutamine-amidotransferase	gnl|CDD|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	1.28505e-74
NC_009767.1|WP_012120926.1|3115243_3116371_-|ABC-transporter-permease	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.6235e-72
NC_009767.1|WP_012120918.1|3107244_3108810_-|Pyoverdin-chromophore-biosynthetic-protein-pvcC	gnl|CDD|213700	TIGR02310, HpaB-2, 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component. This gene for this monooxygenase is found within apparent operons for the degradation of 4-hydroxyphenylacetic acid in Shigella, Photorhabdus and Pasteurella. The family represented by this model is narrowly limited to gammaproteobacteria to exclude other aromatic hydroxylases involved in various secondary metabolic pathways. Generally, this enzyme acts with the assistance of a small flavin reductase domain protein (HpaC) to provide the cycle the flavin reductant for the reaction. This family of sequences is a member of a larger subfamily of monooxygenases (pfam03241).	0
NC_009767.1|WP_012120925.1|3114181_3115231_-|ABC-transporter-ATP-binding-protein	gnl|CDD|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.30439e-165
NC_009767.1|WP_012120920.1|3109253_3109565_+|nucleotidyltransferase-family-protein	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	2.70941e-21
NC_009767.1|WP_012120913.1|3101979_3102525_-|flavin-reductase	gnl|CDD|376575	pfam01613, Flavin_Reduct, Flavin reductase like domain. This is a flavin reductase family consisting of enzymes known to be flavin reductases as well as various oxidoreductase and monooxygenase components. VlmR is a flavin reductase that functions in a two-component enzyme system to provide isobutylamine N-hydroxylase with reduced flavin and may be involved in the synthesis of valanimycin. SnaC is a flavin reductase that provides reduced flavin for the oxidation of pristinamycin IIB to pristinamycin IIA as catalyzed by SnaA, SnaB heterodimer. This flavin reductase region characterized by enzymes of the family is present in the C-terminus of potential FMN proteins from Synechocystis sp. suggesting it is a flavin reductase domain.	1.03413e-44
NC_009767.1|WP_012120922.1|3109946_3111056_+|DNA-double-strand-break-repair-nuclease-NurA	gnl|CDD|214920	smart00933, NurA, NurA nuclease. This family includes NurA a nuclease exhibiting both single-stranded endonuclease activity and 5'-3' exonuclease activity on single-stranded and double-stranded DNA from the hyperthermophilic archaeon Sulfolobus acidocaldarius.	1.88729e-08
NC_009767.1|WP_012120923.1|3111120_3112695_-|hypothetical-protein	gnl|CDD|373362	pfam14885, GHL15, Hypothetical glycosyl hydrolase family 15. GHL15 is a family of hypothetical glycoside hydrolases.	2.45249e-07
NC_009767.1|WP_012120916.1|3104923_3105700_-|IclR-family-transcriptional-regulator	gnl|CDD|224332	COG1414, IclR, Transcriptional regulator [Transcription].	5.54887e-76
NC_009767.1|WP_012120911.1|3101036_3101771_-|4-oxalocrotonate-decarboxylase	gnl|CDD|226480	COG3971, COG3971, 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism].	4.05583e-30
NC_009767.1|WP_012120917.1|3106210_3107218_-|catechol-2,3-dioxygenase	gnl|CDD|274480	TIGR03211, catechol_2_3, catechol 2,3 dioxygenase. Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase. [Energy metabolism, Other].	1.19121e-144

Protein sequences

>NC_009767.1|WP_012120916.1|3104923_3105700_-|IclR-family-transcriptional-regulator
MLQTLQKAVEVLSLFSPTHPEWTVGDIARALEQPKSSTSELLSSMAGQGLLRRTGPGRYRLGWRLLEFGQTLLKTTEFRAEARQVMEEVVARWGETMHLAVLENGQVIYIEKLEGTHAVHISLSGVGARLPAHCSGVGKVLLAHAPWSEVAQILEQQGMHAFTPNTIITPEDLARELELVRQRGYACDQEEVSIGLCCVAAPIYNFEGRVIAAMSISLPTHRFQAQRAGYVTLIVEAAQRVSENLGYHRGMPRWAMKR
>NC_009767.1|WP_012120915.1|3104024_3104942_-|acetaldehyde-dehydrogenase-(acetylating)
MGDETIKVAILGSGNIGTDLMYKLLDCPASMELVLLAGIDPNSEGLARARALGVAASAQGIDAVLEHPDIQIVFDATSAKAHVRHAKLLRETGRTAIDLTPAARGPYVVPPVNLRQHLDAPNVNLITCGGQATIPLVYAVSRVTPVRYAEIVSTVASRSAGPGTRQNIDEFTFTTAHGLEVIGGAQQGKAIIILNPAEPPILMRNTVYALPEDDFDPAQVRDSIEAMVAEVQQYVPGYRLKNPPVFDMRDTPWGRKSAVTVLLEVEGAGHFLPTYAGNLDIMTASARRVGDVFARHLLSRREVAV
>NC_009767.1|WP_012120914.1|3103017_3104028_-|4-hydroxy-2-oxovalerate-aldolase
MNAPRLTDTTLRDGSHAMRHMFTRQHVRDIVTALDRAGVPVIEVTHGDGLAGSSLQYGFSFVSDLDLIAEARESAERARIAALLLPGIGTRRELKAAVERGVQVLRIATQCTEADISEEHFKMAKDMGLETVGFLMMSHMRSPEFLAEQALLMESYGADCVYVVDSAGAMLPRDAAARVRALKDTLRVQVGFHAHNNLGLGIGNTLAALEAGADQIDGCLRGLGAGAGNAATELLAAVLDRLGVNPGLDVLALMDAAEYVVAPIMPFQPFPDRDAITIGYAGVYSTFLLHAKRVGEQLGVDPRAILIELGRRQTVAGQEDWILDVALELVRKRERA
>NC_009767.1|WP_012120913.1|3101979_3102525_-|flavin-reductase
MTVQTDGATVAPVPFDSRQFRATMGKFATGVTIVTTYHEGQSHGMTANSFLSVSLDPPLVLVSVATRARLHALLAPGCRYGVSVLTDDQEALSRHFAGRPIEGLHIPFVWQRGVPLIDNALAHVVAQVVDAHPAGDHTLYIGQVEYLASRDGPPLLFFAGKYGRMETVSDAGAEGPFWYLW
>NC_009767.1|WP_012120912.1|3101754_3101967_-|2-hydroxymuconate-tautomerase-family-protein
MLVLRVTMVEGRTDEQRAALMRRLSECAARHFDKSLEEVRLVIYEIPKTHWGVGGRSLAEREGTSHGTER
>NC_009767.1|WP_012120911.1|3101036_3101771_-|4-oxalocrotonate-decarboxylase
MELSADALALLEDIRQARADRCVIASRGNARRVTLAEAYAIQAALGEEQPIKGYKLGLISPAKQQQMGITAPVYGRIFPAMMLESPIRLSRFIQPRVEPELAAVLCAPLAPDAAPGAAAAAIGGWFLGVDMLDSIWDGYRFSVAEVVADNSSGGGFLLGARMIDHPPDGVLRLYLNGTLRTEGDMRSLGDLYERLCWLATMTGGLRAGQIIFFGSPAAATPAEPGVLEVIGPDADCLIVRLENE
>NC_009767.1|WP_085979079.1|3099582_3101040_-|aldehyde-dehydrogenase
MMQSPSFHVQHYIGGAFVEGTRRFEIFYPATNEIIGTAPEGRAEEVDAAVQAATHAFAAWSRAGAAERRRVLKAFADAIRAHAEDLERIETWDVGRPIRENRAGYVQRLAANIEFFADFAVTHGSEAYPMDSGYINYVLRQPVGVAALITPWNVPMLQATWKIGPALAFGNTVVLKPAELTPIGAWKLAQIAHSAGLPPGVLNVVHGFGPESAGALLTQHPGVQLISFTGESTTGKIIMGAASHTLKRLSFELGGKGANIIFADADLDRAVAISLRSSFFNQGEFCLAGPRLLVERPIYDEFLQRFIAATQQLRVGDPMDPETTVGALIAPEHLQRVRSYIDIARGTQAEIVLGGDQPDLPAPFNRGNFLNPTIIVGVQPQDRVCQEEIFGPVVTVAPFDGEEEALAIANGVAYGLSAVVQTRNLGRAVRVAGAIDAGTVWINDFFVRDLRVPFGGMKQSGIGREGGHYSLEFFTEAKTVCLSNQ
>NC_009767.1|WP_012120909.1|3098797_3099601_-|2-hydroxypenta-2,4-dienoate-hydratase
MPEQPVGGEDIDAIARRLDNAWEQRQPLAPLSASMALTPEHAYAIQSRWTDLRLARGERVIGRKIGLTSRAIQQQLGVNEPDYGSLWASRYFPLAGGRVDVPADLFVQARVEGELAFLIGRPLREPGVTLHDVLAATDAIAAAIEIVDSRIADWRITLVDTVADNASYGGFTLGPWSRALRSVDLRTVGMLLHHNGEPAVQGIGAAALGHPARAVAWLANKLIAFGINLEPGDIVLSGSLGPAIPMRTGDLFTLEIHGQPPLSMRFV
>NC_009767.1|WP_012120908.1|3098583_3098784_-|hypothetical-protein
MPLLEVLYAGEEPLQPERKRAFAREAVAIFQEVLGTPPGRLRLVIHHLHPDDSLGLLADDEADAEP
>NC_009767.1|WP_012120907.1|3097144_3097669_-|type-1-glutamine-amidotransferase
MRLSGKRIAILLAEGVEDLEFYVPMMRLQEEGAEVVAAGLDLRPVRGKNGLEITPTTTIAELRADDLFALVLPGGWAPDKLRRYRAVTDLVQAMHAAGKVIGIICHGGSIAISAGIVGGRRATGSLGIKDDLINAGATWVDEAAFRDENLVWGRVVADIPAFCRELVAALVEQV
>NC_009767.1|WP_012120917.1|3106210_3107218_-|catechol-2,3-dioxygenase
MADHKEPIFDVAQLAHVEILTPKMNDTLWFFKDLLGLEETERSGKSVYLRAYEDYYHHSLKVTEADQPGLGHVAWRTTSPQALERRVQAIEAIGLGRGWINGDHGHGRAYQFTTPDGHLMELFWDVEYYQAPEAMRTELLNRPQKRPLRGVPVRRLDHVNLLCQNVTPNKQFMMDQLGFRLREHIILNDGSEAGAWLSVSPLVHEVATMRDATGAKGRLHHICYWYGIPQHLSDIADVFSDYGITIEAGPGKHGISQALFMYVFEPGGNRVELFGDAGYLIFDPDWKPITWHESNLAKGIIWFGSPLPAEYFMYGTPPVQKEVQERTEEELVGAN
>NC_009767.1|WP_012120918.1|3107244_3108810_-|Pyoverdin-chromophore-biosynthetic-protein-pvcC
MTVETVAKTTVPLTGEEYLESLRDGREIWIYGERVKDITTHPAFRNATRMVARLYDALHDAEKQSVLTCPTDTGNGGFTHKFFRASRSADDLVGARDAIAEWARLTYGWMGRSPDYKAAFLATLGANAAFYSPYQENARRWYRESQERVLYFNHAIVNPPIDRNRPPDEIRDVYMHVERETDAGLIVSGAKVVATGSALTHYNFIAHYGPLPIRSKEFALIFIVPMDAPGVKLIARPSYEMAAEVMGSPFDYPLSSRLDENDSVMIFDQVLIPWENVFVYGDVEKVNAFFPLSGFIPRFTFHGCTRMAVKLDFIAGLFLKAVEATGAKEFRGVQARVGEVLAWRNLFWAISDAMARTPIPWNDGAVLPNLDYGLAYRVFATVAYPRIKELIESDVASALIYLNSHAVDFKTPEIRGYLDKYLRGSNGYSSLDRVKLMKLLWDAIGSEFGGRHELYERNYAGNHENIRLEVLLTAMATGAADQYKGFADQCLSEYDLDGWTVPDLINPDDVNVILRRFGNGK
>NC_009767.1|WP_012120920.1|3109253_3109565_+|nucleotidyltransferase-family-protein
MPLQIDIPHDAIAAFCKRWRIKELSIFGSALRDDFRPDSDVDVLVVFDESASWSLFDLVHAQQELERIFERPVDLVEKKAVRNPFRRHHILHNREVIYATGRA
>NC_009767.1|WP_012120921.1|3109545_3109920_+|DUF86-domain-containing-protein
MQPEERDPAYLWDMLIVARSVVEFTHDITRDAFLSDNRDAEIIRLAVERKLEILGEAARRVSPHFRETHPEIPRAQIIGLRNLISHEYDRVDHERIYAIAREEAPQLIALLEPLIPPLPPTEDD
>NC_009767.1|WP_012120922.1|3109946_3111056_+|DNA-double-strand-break-repair-nuclease-NurA
MSTPPAIESSLTTADLPASILSAIDACAEACRATLVRLEGDRDRLRDALARRIHPAPDGPVRRLCAVDGAHATVPAAGATFAAIAAVAVEDAELTDQDALVQLMPPVEELETIIGGMRTVMELRLLAKRLRATSSGLFVLDGSFYSALLEINRLLVRHAQDARGGRMAAWWKPFDELLEAFFAGEDWRLVLSSRRVIAHPKLATAADDVAHLAPHLSGTVTDRTLWSTVLEAGEYSLPAPLIRRDRPHLLTGYRSPRLKDFGERRAAIEQGYGQLYVIYYRPDAAAPAYRIELPAALIAREPLGAVLATFRAALRIGAIQEPLPQFLADAICRQTGRALEATAEGARTALQNEFGLNLVQRYLGPYRTR
>NC_009767.1|WP_012120923.1|3111120_3112695_-|hypothetical-protein
MPALHLFRHPKLFRRRHDTVKALNNAAFLMLPVLLIALSGRITAQEERPEASQIQDGVAVPSGYFFPFVYTADILYGNFGQHRSSGCHPVDEAAKFHLIVTGPQSHRTRNWCGNPDNAFGAIKNLSPNTLILLYRMGPGQYVISPWGAVGDGWEWVKTYHGKEAQDRWTALGVNSGDYLLSLNYPVERAMEIGNRNWQEYWITRNHTDIWVNRINGMNGNATDGIFADGMQYGVSWTNGWCAERAYREQGCAQMDHPSTYYQNGEYNQELWRQHYDMFLERAVPYYRQRNLLFGLNVWRLSLPQQIALYERLGIVAMEECGFLCTGRTDLRSWTQKLQAMQQAMNYAIISVNLPPGYSASNGPDAMERVWCADGVCQTGWKWLWYSLGSYWLSYEPYRKNAYFYFSLWGYRGSYWFDEYDPRYLHLGMPTGSAVRLAHDVWIREFERGWIAVNPTLRQANVSVPSGKARILEHTNFKNPESAPLVDQFALAPLQGVVLLKEGHLYPVWKTYLPLVITSSSASRR
>NC_009767.1|WP_012120924.1|3113062_3114172_-|dipeptide-ABC-transporter-ATP-binding-protein
MDTAKKNGTSDEILLEVRGLKKHFPIQSGFLRRVTGYVKAVDGIDFYIKKGETLGLVGESGCGKSTTGRTILRLLDPTAGEIIFDDPNIGKVDLAKLNRAQLTRVRPNMQIIFQDPFSSLNPRLTVGQIVGEPLEIQKVASGQALKDRVAELLQEVGIRPENMTRYPHAFSGGQRQRIGIARALALNPKLIVCDEPVSALDVSIQAQVLNLLEDLQEKYDLTYLFVAHDLSVVEHISDRVAVMYVGYIVEMASTEELYYHPKHPYTEALLAAIPKPDPRKRTRPIKLPGDVPSPANPPSGCYFHPRCRYAEEICKVERPPLRDIGGEHWVACHFAEQLQLQGVTRLNEIPLIELPKRQASVPATTTATT
>NC_009767.1|WP_012120925.1|3114181_3115231_-|ABC-transporter-ATP-binding-protein
MTNVATGTGAAATGVQIVSEDDVVRVEDLRLSFYTTLGVVRALNGVSFNIPRGKVLGVVGESGCGKSQTGLSIMQLTPGRIEGGRILFREFNTSDVIDITKLEKNGPEMRKIRGNHISMIFQEPMTSLNPCYTVGHQIEEAILLHQTQDKAEARRRAVDILRKVGMPNPERIADSYPHQLSGGMRQRAMIAMALSCNPTLLIADEPTTALDVTTEAQILDLMRDLQHEIGTSIMFITHNMGVVAQMCDEVAVMYLGRIIERAAVDDIFYDPKHPYTISLLRSIPRLGVARGQKLESIKGTVPDPYSTVPGCPFHPRCPAAIPGLCDTVMPDEMFVAGSRTHTVRCHLYT
>NC_009767.1|WP_012120926.1|3115243_3116371_-|ABC-transporter-permease
MATAAGELPKVAKGKKQEDVGQIPQWKLMVRRFSQSKLSVGALIVLGFMYTIMILSDFIAPYPHDVLDSNNSFAPPTQIVWGPEGPGIYGLKQELDMERFQWIYTPDTSVIYPIRFFVQGHEYSFLGLFPSRLHLFGIEAPPDSNAKIFLWGADKEGRDLFSRILKGSQVSLTLGFFGVFLFVVIGSIVGTASGYFGGALDNLIQRLIELIRSFPDLPLYMALAAAVPLNVPITVRYFMITIVIAVIGWTGLAREVRGKVLAFRSADYTAAAIAAGASHWHVITHHLIPNAMSHIVVVGMLAIPGAIGLETALSFLGLGILPPAVSWGILLRDAQTVQAVVTYPWLLIPVALLIITVLAFNLLGDGVRDAVDPYA
>NC_009767.1|WP_012120927.1|3116416_3117400_-|ABC-transporter-permease
MLNFIARRLVNMFFLLIVVSFVGFWIIQLPPGSILDVQIQRLRMQGGNLPESMIQALRDRYGVDDPFYVQYWKWISRSLQGDFGTSFETDQKVAERIYNRLGISFGLSLTALLFTWLVAIPIGVYSATHRYTWPDYLITFVQFLGLSIPGFLLALILLITASRLWDQPIGGLFSPQYADAPWSLAKLWDFIRHVWIAIVVLAIGATAGLTRVMRANLLDVLNMQYIQTARAKGLKESTVIWKHAVRNAIHPLVMSLGTLLPALVVGETLIAIILSLPTIGPLYLDALRSQDMYLAGTILVMLSALLLVGNLIADLLLAWVDPRVRLE

Crispr_ID: NC_009767_62

• CRISPR_ID: NC_009767_62
• CRISPR_location: 3185796-3186004
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_009767_62

Consensus_repeat	Method
CCTGAACCCTCCCGCGCGCGGGGGG	CRISPRCasFinder

spacers of NC_009767_62

>62.1|3185821|36|NC_009767|CRISPRCasFinder
CAGGGACTGGAGCCGCACATCATTATCGAGATGACC
>62.2|3185882|37|NC_009767|CRISPRCasFinder
TATGGTCCTGATGCGGAAATCGCGAGTTTGCCAGAAT
>62.3|3185944|36|NC_009767|CRISPRCasFinder
CAGATGTTTCAATCCAATAATAGTTGACGCAAATTC

CRISPR arrays and Neighbor proteins around NC_009767_62

CRISPR arrays

The CRISPR arrays of NC_009767_62

>merge|NC_009767|62|3185796-3186004|CRISPRCasFinder
CCTGAACTCTCCCGCGTGCGGGGGGCAGGGACTGGAGCCGCACATCATTATCGAGATGACCCCTGAACCCTCCCGCGCGCGGGGGGTATGGTCCTGATGCGGAAATCGCGAGTTTGCCAGAATCCTGAACCCTCCCGCGCGCGGGGGGCAGATGTTTCAATCCAATAATAGTTGACGCAAATTCCCTGAACCCTCCCGCGCGCGGGGGG

>NC_009767|62|53|3185796-3186004|CRISPRCasFinder
CCTGAACTCTCCCGCGTGCGGGGGG	CAGGGACTGGAGCCGCACATCATTATCGAGATGACC
CCTGAACCCTCCCGCGCGCGGGGGG	TATGGTCCTGATGCGGAAATCGCGAGTTTGCCAGAAT
CCTGAACCCTCCCGCGCGCGGGGGG	CAGATGTTTCAATCCAATAATAGTTGACGCAAATTC
CCTGAACCCTCCCGCGCGCGGGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012120986.1|3194338_3197008_+|pyruvate,-phosphate-dikinase	unknown	unknown	gnl|CDD|236446
NC_009767.1|WP_012120975.1|3175839_3178170_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120985.1|3193274_3193892_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012120976.1|3178176_3179436_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012120983.1|3191173_3192106_+|branched-chain-amino-acid-transaminase	unknown	unknown	gnl|CDD|235841
NC_009767.1|WP_012120974.1|3173334_3175605_-|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NC_009767.1|WP_012120980.1|3184110_3185577_-|glycosyltransferase	unknown	unknown	gnl|CDD|340861
NC_009767.1|WP_012120978.1|3181923_3183510_-|decarboxylase	unknown	unknown	gnl|CDD|143503
NC_009767.1|WP_041330746.1|3199456_3200632_+|MFS-transporter	unknown	unknown	gnl|CDD|341031
NC_009767.1|WP_012120989.1|3201010_3202318_-|AI-2E-family-transporter	unknown	unknown	gnl|CDD|223701
NC_009767.1|WP_012120971.1|3167708_3169028_-|DNA-processing-protein-DprA	unknown	unknown	gnl|CDD|223829
NC_009767.1|WP_012120987.1|3197789_3199034_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012120982.1|3187445_3190577_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120977.1|3179440_3180652_+|glycosyltransferase	unknown	unknown	gnl|CDD|340825
NC_009767.1|WP_041330740.1|3171314_3173213_-|response-regulator	unknown	unknown	gnl|CDD|237526
NC_009767.1|WP_041330744.1|3180716_3181115_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012120981.1|3186248_3187400_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NC_009767.1|WP_012120990.1|3202403_3203330_+|nucleoside-hydrolase	unknown	unknown	gnl|CDD|224868
NC_009767.1|WP_012120984.1|3192108_3193266_+|thiolase-family-protein	unknown	unknown	gnl|CDD|238383
NC_009767.1|WP_041330738.1|3169039_3171127_-|RecQ-family-ATP-dependent-DNA-helicase	unknown	unknown	gnl|CDD|223588

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012120986.1|3194338_3197008_+|pyruvate,-phosphate-dikinase	gnl|CDD|236446	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional.	0
NC_009767.1|WP_012120971.1|3167708_3169028_-|DNA-processing-protein-DprA	gnl|CDD|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	3.84719e-45
NC_009767.1|WP_012120985.1|3193274_3193892_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.85184e-34
NC_009767.1|WP_012120983.1|3191173_3192106_+|branched-chain-amino-acid-transaminase	gnl|CDD|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	9.47845e-165
NC_009767.1|WP_012120974.1|3173334_3175605_-|sensor-domain-containing-diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.78915e-54
NC_009767.1|WP_012120980.1|3184110_3185577_-|glycosyltransferase	gnl|CDD|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	7.42349e-92
NC_009767.1|WP_012120978.1|3181923_3183510_-|decarboxylase	gnl|CDD|143503	cd06830, PLPDE_III_ADC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase. This subfamily includes plants and biosynthetic prokaryotic arginine decarboxylases (ADC, EC 4.1.1.19). ADC is involved in the biosynthesis of putrescine, which is the precursor of aliphatic polyamines in many organisms. It catalyzes the decarboxylation of L-arginine to agmatine, which is then hydrolyzed to putrescine by agmatinase. ADC is homologous to eukaryotic ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC), which are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. Homodimer formation and the presence of both PLP and Mg2+ cofactors may be required for catalytic activity. Prokaryotic ADCs (biodegradative), which are fold type I PLP-dependent enzymes, are not included in this family.	2.771e-137
NC_009767.1|WP_041330746.1|3199456_3200632_+|MFS-transporter	gnl|CDD|341031	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters. Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.38256e-58
NC_009767.1|WP_012120989.1|3201010_3202318_-|AI-2E-family-transporter	gnl|CDD|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	3.76843e-52
NC_009767.1|WP_012120976.1|3178176_3179436_+|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	4.10185e-43
NC_009767.1|WP_012120987.1|3197789_3199034_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.43088e-81
NC_009767.1|WP_012120977.1|3179440_3180652_+|glycosyltransferase	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	9.84726e-41
NC_009767.1|WP_041330740.1|3171314_3173213_-|response-regulator	gnl|CDD|237526	PRK13837, PRK13837, two-component system VirA-like sensor kinase.	1.06223e-58
NC_009767.1|WP_012120981.1|3186248_3187400_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	9.08504e-60
NC_009767.1|WP_012120990.1|3202403_3203330_+|nucleoside-hydrolase	gnl|CDD|224868	COG1957, URH1, Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism].	9.23306e-79
NC_009767.1|WP_012120984.1|3192108_3193266_+|thiolase-family-protein	gnl|CDD|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	8.70288e-180
NC_009767.1|WP_041330738.1|3169039_3171127_-|RecQ-family-ATP-dependent-DNA-helicase	gnl|CDD|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	1.24751e-133

Protein sequences

>NC_009767.1|WP_012120980.1|3184110_3185577_-|glycosyltransferase
MNHRILILSTSAGSGHKAAAAALEKVFRQSPQVAELVNLDALERTNELYRAFYSDLYLRLVQERPQLVGWWYQASDEPWKTDAFRLLFDRINADPLTRFIREFKPTITVCTHFMPAGIVAQLLAEETLDTRLAIVTTDYDFHSMWLSPRFNRYFVALEETKVHLMALGLPEDRITISGIPVDPAFEEPVDRDAALARYHLRSDLPTLLLSAGAAGIGPAREAVQQILQMSTPSQVIVVCGRNEELRAELVELVEPQAKRFRVLGFTDDMHVLMRIATILIGKPGGLTSSEAMAAGLPMVIIAPIPGQEERNSDHLLEEGVALRCNQMTTLAYKIDRLLQNPERLARMRENTRNIGRPDAARVIVETLLHEDNEPVTLQEPTPPIRVLPLRINIADLFSPPLRDDDQFVIADAQSDAPIGVVTGKEMRVLFDNLEMESIEDTDFYLNRETLALLEERGASATLLDVLQRALGARSECDVRWRRGTSVGE
>NC_009767.1|WP_012120978.1|3181923_3183510_-|decarboxylase
MNGQTYVTAFTNRYGVGPEGPINDFISRRGDRLLLADQIDLNAMAARYGAPLEVVYCPQITVQIERMREWAEAARARSGYAGDFIYAYATKANFAEEVVRTAISSGAHYETSAAADVAIAHYLWQQGVLPSDRFIFCNGSKDHAYIAAIVTLRHAGFARVVPVIDDLDELETLLAMCREPLLLGVRERHTPADVDVNHPGGERFGLTPDEIARVVERLHHTPHRLVMYHAMVGSQIEDPERWNERLARSAEAYARLRQRAPSLWLFNFGGGMPTSAYSLDFRFDYAGFLDRLMTMLAAVCDTHHIPQPTLVGEFGRYTVASHNVFIMEVGRVKCGQGAAPDWVLLNGSLMVALPDSLIVPGQEFIILPLDGWDQPVRPVRLAGRLTCDSDDFFPRPGAPPLLLPEPYPGQKIAFFGVGAYQQMIAGRGGAHHCLTPEMRRIIIERDEDALVVREIAPQNVGQIMGLLGYARETLELPTPQHERMPAERRAPREPIRAPRPARRRNVLRNAPPVRYGAERRGWGVRVRG
>NC_009767.1|WP_041330744.1|3180716_3181115_+|hypothetical-protein
MKTASGLPVNDALIDQRSVCGIHFQARTRVVNRKEQPQASIGRPIPRIAPGVEGTDRAQTTAICGNQRERSDALLNLTNTAHIDEGDHASIGRSAHAGDSCVRVGDDRLRHSAGRSYPIDTCAVAGVLDVRQ
>NC_009767.1|WP_012120977.1|3179440_3180652_+|glycosyltransferase
MRICYVAYPNSLRLRSANAVQTHATLRALKTLAPDTLAIVPRVETGPSAFDGLALHLPRIGIGRLSRLYRSTLWYYAERSAYAWLVLATLLWLRLARRRCFDVIYVREVICALWLSLLAPRLTGARVVYEVHDLESRNPSRAKERWVQPLLHLIDRLTLMRPAALTSLTGAFRDLLAWLGVRSRCEVAVLPDAYDETIYTPQDRDAARRALGLPDEPIIVYAGLTFAYRGVDLLLDALADVPGARLILVGGRDRERAALIAQAQRSGIGERVMFAGVQPQDRIPLYLAAADVLVIPDTVTDVTASPLKLFEYMAMERAVVCPDLLALREITGGDGALHFPRGDRAALAVALRMLLDDPAKRQALAKCGRERVAPYTYTQRAARLLAVCERVAQQRNGVCVADV
>NC_009767.1|WP_012120976.1|3178176_3179436_+|glycosyltransferase-family-4-protein
MTILYFIPRYDPALMGNRIHAEVIDAWRDHGIDAEVITLAAGIARLSSEVQEGIVVHRLPVSSAMALKGLNRALAFPTGYPYLAGALVHYRRFIATRRYDLVHVETAFPLGLVAALTLRSIHPPLAVTLPGADIMSVPEFDYGYARFLAVRVLLPFVFRRSATLRADSPQIRSLAVRLGAPPAKVVAIPYNITADSYPPAGVEIETLRRQSRNDICARYNLDPSRPIIVSLNRLHPFKGIEYLVESVPHIRAGGIDPQVLIVGPNRSTQRFGDYGAYLRRRAEDLGVASAVIFTGGIPHDQAMAHLAAADVVVVPSVSESFSRVVVEAAAVGTPPIVTSTTGVSEYVAASECGIVVPPRSGEAIGAALVRLLRDRSLWETYARRGPTMAAAFNSRTIAEQLLCLYAPFLSGKGETAPAG
>NC_009767.1|WP_012120975.1|3175839_3178170_+|hypothetical-protein
MLASTQSSRQWLFKSASMLSNLAYAAVVGLLGALAAFSPAPGVRNVAVDESVVFDNFWGVERNDTAVWRWSKDQSTIHFTAYREYSGVLLSMLLTAPQYPGAPEIAITFATDTALPFTLGIAPQWRVYHILLAPNGWSWMHPGLQLRGVAPYSGTPDRRALGVAVGGVRIRPAGERLLLPAALRCATIVVIALLTRVWLRLWAPFWVSQVASLSIALLPVAGWRLAPGMMPVQPPGVWELTLTVGAGFAALWLVKSYIIGDHVAEYRKRAFDWLFGSLGCLLILSSLFSLRWRLGFDAANMIYSGWLIEHHGLVPYLNIVVQNMPGTYLFSAAIVRLFGFGDLGLRFADQMLLLALLASVVVALRPFGARVGWAAAITFGLCYLHNGSYMALQREFVLLVPIGLALVIVRIRHPVISKRFFLALTVVGVLFGLAATVKPHAIIGLPIVAGWYVWMHFSPDVQANNRLMVVLKASTAVIVGALLPLVAVAGYLWQAGAWSYFLDIAINYWPLYNRLDRVHQTIDAINYPLYVWNNWRELGGHHIWLITALIGAASFRDRTLDRDQRMFVQMLIALAIVYSIYPIPAGKFWSYHWLPMLFFLVLLMALSFRLLEQPGRPHLFALLIVGTVIVAAARPAPELHLFGGPPTNRKFQRTDRIAAFLRERIRPGDPVQTLDWTGGANYAALIAQTVPATSFVEDFYFYHHISHPTTQRLRQRFLDEFDRNPPRFVIQITAEDKPWVSGLDTTRAFPELDQRLATAYQPVLFGDGFIIYERRT
>NC_009767.1|WP_012120974.1|3173334_3175605_-|sensor-domain-containing-diguanylate-cyclase
MDIESLRAENEALKARISDLERALQHAQDESRSPLFSAAPDCFTALHETALTIMRHLDLNDVLEAIVLHATRLAGTSDGYIDLLSPDGTQMEMKIGVGWYAEHCREPIDIGDGIGGRVWQTGKPMIVRDYRTWEGRVPFLDSSSIGTIVAVPLRSGSTVIGVLGISYFESDRPVADALVDMLLRFADLAAIAIGNARLYTIVQNELAERRRIEAELRENEQQLRRLYAITRRQAQELHLIGQVREAIAREIDLPALFRVVVESINATFGYTLVCIYLRDGDNLILQHQVGYPSPINRIPLDKGVISRTILSGRPTLITDVRSDPNFIGVMDNITSEICVPLCDQERVIGALNIESVDGVVLTEDDLRLITELTGHINVAIERARLYEQLWRRVQQLDALYDIMTDMIGNLDLDAVLQTIVTRMIALLRATHGMIALYDPEQRNLRIHYSTGMDHNYANKRLALGEGLIGKVALTRQPLVVYNYEHWEGQSPVFRSMPSSNVLAAPLLAGDELIGTLSVGDVSLARVFTNDDIRLLSMFAQQATIAIKNARLFAEVQHLAITDPLMGIYNRRYFFSAAAREFERARRHRHTLAILIADLDNFKQINDHYGHPIGDQVLQAVSNTFRRELRSIDLLARYGGEEIIVLLPETDCSGVIRVVERLRSRLLEAIATERGAIHITASFGAAVSQRINAPDVETLIGSADRALLRAKQQGKDRLVIWCDACAANGVCLLAPPEACDRRITVVSSTNTSPEKTA
>NC_009767.1|WP_041330740.1|3171314_3173213_-|response-regulator
MVQNLIVNRPGVFIASYSGLALLLSGLTIVIRGSEYLLYLLIWPIIMSAALALWRMYLILVGIGVAVTAITLPLVVPNLNESAMTALAAALAAVLFCESIYRLMDRQRAMARALRESEERFRCTFERAPAPMAVTDVQGRLKWFNQRLCDALGYKRDELNQQMMSRFAYSDDQNLRLHPALLASPDGEAAIEKRYVAKDGRVIPMLVRGTLLHNAAGEPHEVLVIFFDLTAQREAEAQRLALERQMLEVQRLESLGILAGGVAHNFNNLLASILGNTNLALLDTPPHSPARPCLEQVESDVQRATELTRQMLAYTGRGQVMRETIDVNADLNAMTPLLRAVIPSAISIDYQCEQESLKVCFERVQLRQIIVALVNNAAESIGDQPGQIVITTAERTFDAANLPSSAIGTEMREGRYAIIDVRDTGCGIDRQTMERMFDPFFTTKPGRRGLGLAATLGIVRSHSGAIQVESAPRQGSVFRVFIPVETLIPETPSSSPSLPRLEAAQPEVRQSQGIVLVIDDERSVRSMAARMVERLGFETLQASDGEDGVALFNAHADSIACVLLDVSMPVMDGAQALQIMRAIRPDAPIVFMSGYAGEELAARFGQLQPSGFLYKPFDTAELKACLDAALKK
>NC_009767.1|WP_041330738.1|3169039_3171127_-|RecQ-family-ATP-dependent-DNA-helicase
MPLRHYAEHLLKQALRNPSATFRDGQWEAIADLVERRARLLVVQRTGWGKSLVYFLATRLLRERGSGPTLLISPLLALMRNQLLIAERVGVRAATINSSNKNEWTNVLSHLHAGGIDMLLVAPERLANDEFRSEALRPIADTISLFVVDEAHCISDWGHDFRPDYRRIARVLQMLPPTIPVLATTATANNRVVADIQVQLGVNLRIVRGPLARNTLRLQNIALDSQAERLAWLAAHIPDLPGSGVVYTLTVRDAQRVASWLQSCGIDAHAYWGDLDSQTREDLEQRLLESRIKVLVATTALGMGFDKPDLGFVVHFQRPGSVIHYYQQVGRAGRAIDQAYGILLSGKEDQDITEYFITTAFPPRDHIEMVLHTLESADEGLTMAQIESRVNLSRSQIEKTLKILSVETPSPVTKIDNRWFATPVNYTIDLQRIEDLTTLRRAEQERMREYVHASECLMVFLKRELDDPDLQPCGQCAVCIGQPLVSPTYPEALERRAVTFLQRHHQRIEPRRMWPGDALQVYGWRGKISPSLMAEEGRALCIWGDAGWGELVKRGKQIDGRFDNALIDALVELVRQRWLPEPAPGWVTCVPSLTHPTLVADMAQRLAQRLGLPFVAAVRKVRPTEPQKRMQNGFQQAHNIAGAFVVDRWSGIDGPVLLVDDMVDSGWTFTVVAALLREAGSGPVFPLALALVQGH
>NC_009767.1|WP_012120971.1|3167708_3169028_-|DNA-processing-protein-DprA
MVEHELTPDTQAILLLCGTFGRRGSSVAPLSAAEYHALALWLHAQQMRPGDLLHPEGVACIQSMPGAPVVQERLLALLARGGALALTVEGWSNKGLWVMSRSDPDYPQRLRARLERIAPPLLYGAGNRRLLQNGGLAIVGSRRVTEDAIAFTCDIARRCAIQGIPVISGAARGVDSEAMQAALAADGAAVGVLADSLLRAAVSGKYRQALRNGNLALVTAYDPEAGFSVGNAMGRNKYIYTLSDYGLVVSASLGEGGTWDGAIECLKKQWVPLFVWSSDKAGPGNQRLCEMGAISLSQELLSKYASLHHLFNDLSRASVPTPLLRESEAINEHSARMSPGKGMNTTAGNERSVHDTSSLDQATLALMPVDTNGAAPAIDLFPIVWPHLVQALRVAQTEREIAQHCGIEPQQARAWLQRAVQEGLAVKLTRPIRYVLHKP
>NC_009767.1|WP_012120981.1|3186248_3187400_-|ATP-binding-protein
MLIPRPTVINQITRLLAIHPIVALLGPRQCGKTTVARMVGEQQASTYFDLENPVDIRRLSAPLTVLETLSGLIIIDEVQQRPDLFQLLRVLVDRPQNNARFLLLGFASPHLVRSASESLAGRIGFVDLSGFDLTEVGVAQRDRLWVRGGFPRSFLADDDPSSMAWREAFIRTFLERDIPQLGITIPAEALRRFWTMVAHFHGQQWNAAEFARSLGASESTARRYLDILGGAYMVRVLPPWFENLGKRQVRSPKVYIRDSGILHGLLHLETLADVQSHPKLGASWEGFAVEQIIRLLDTRDAYFWATHSGAELDLLVHLRGRRYGFEIKYADAPGVTRSMRIALSDLGLEHLWVIYPGRQEYALTTQITVLPLDALPRIASALR
>NC_009767.1|WP_012120982.1|3187445_3190577_-|hypothetical-protein
MSFIAELSLILIAAAVLCCYVGWGAARLALPPSLASFRAPLTPLIGYVVLLWSGFMLASLVLNLRWTVAVILIGATVLNILTWRAEGPPQPLAWLRAQPEALIPPLLALLTGILPLLEYGYPTIIGRGWDTEAYLPMAQHLIDYSLPRIPEAPQSLLRDLVTHPPRIGLTLGFSIFHGMTMIFSGASALASFAPVIAFMRALAVLAMYVWLRATMDAGRVGSFLGATLTALTSLMLWIGYFNFGMQMSAWCLLALALTTGLAAVDDLAQRRLAAWRGALLAAIALAAIPIAYYPALVIAVPLISAAGAARLFETWRHPQPYTTPISLALAALALAGLTLAASALAVQDYFEGFSFRYSLIEPKIGPDRFIGVDEILGLTAFRLSNDGDQPPSLLIGVALLATVLPGCAALVLPHRWRNDADAGERTRLRWTLTIAAVAAALIWLRFGRPYEYGFMKGAAYTSFVIWGLTASGVERIAQWTKRTGMLLASSAALLILACTGWSQSLTVADHIRGPAIFTRDIAAFDRVAAQLPHGATVLLSGDETLTGPINGMLATMLYGKELWGRVPAAYAAQSFWSPGETPNYVVLAAREDPWPLDVGAKERWRSSAIALYEMPPDATFVLGRSESYVIAAVDPKSPASLAIWRRAGHNRVIAPNEPFTLEMPHAATLRLTLAALEAQTVMLRQGHTTTTLSLEAGVTTIKTGSSSTVQVIPTAPLALVHAVVSPTDTPTPVSTSLDITRVAWSATSEQQGDQIVLSTSLANPGNHALRYEVIIIGDTFDAPVRIARLLAAAPLEGEWRLALDLARGASEARMNGAPAPMLAADVAVNPPDGRYFGVLAIYSGGAVVAQAPLFTMTMSEGAVATFEPVFFSVETARARSDASPLPAHQRALLAGTPLMCDELRLALEQIVLERQSPPPGVTPVTPLSPGERLNVQVFWRATGDRENQDRSPMVSFQVLDDENRKWAQWDGVLGDWLPVPAWKPGAAVRQDIPLTLDAATPPGDYRLLLIVYDPSTGRPILVAGQEAAVVGKVRVAASGGIDP
>NC_009767.1|WP_012120983.1|3191173_3192106_+|branched-chain-amino-acid-transaminase
MTSNRFAFFNGEFVPIEQAQVSVMTAALNYGLGVFEGIRAYWNADDGQLYVFHLREHMERLRRSCNIMFMNLPYSVDELYDLTVELLRREAFREDAYIRPLVFKSDHTIAVRLNNMTDAFVLYAVPFGQYIPGTAVRACVSSWRRIEDNIMPSRAKVSGGYVNSALAKTEALLNGYDEAIVLGGDGQVSEASAANLYIVRNGALITPPITSDILEGITRRVVAHLAQAELGVPVIERPIDRTELYVAEEAFFCGTGAEVKPIIEIDRRPVGSGAVGEITARLAELYSAVVRGCLPAYRAWCTPVYIDEGA
>NC_009767.1|WP_012120984.1|3192108_3193266_+|thiolase-family-protein
MAEALLIEAVRTPVGKHGKALRAIHPVDLLGQHIAALLARVGVDPAAINDVIAGCVGQSGEQSANIARNAWLAAGLPESIPATTIDRQCGSSLQAIHFAAQGVMAGVYDLVIAAGVESMTRVPLGASIAVGPGTPLSPRLAQRYGLDRGWFDQARGAERIAREWRLTREDLDQYSLRSHRLAAAARDAGRFATEIIPVALPGGGVFDADEGIRADTSVEQLAALKPAFPDLDLITAGNASQISDGAAAALIASPSAARALGLRPRARFVSFAVVGVDPVTMLTGPIPVTRRALERAGLRVEDIDLFEVNEAFAPVVLAWQKEIGAPWERVNVNGGAIALGHPLGATGGRMMATLVHELERRSGRYGLIAICEGGGMANATIIERV
>NC_009767.1|WP_012120985.1|3193274_3193892_-|Uma2-family-endonuclease
MTAPASTGQLRMVRAADSLDIDLDALQGLWSEEQYLALARQTNRLIEFTDGVIEVLPMPTRKHQAISLFLVLALLAFVQPRGGAVFYAPLRLRVRPGAFREPDIMLLCDARDPRNQNEFWLGADLVVEIVSPDHPERDTVEKPRDYAQAGIPEYWIVNPLDETITVLALEHDVYSTFGVFRRSEQAVPRLLDGFAVSVDAVFDAE
>NC_009767.1|WP_012120986.1|3194338_3197008_+|pyruvate,-phosphate-dikinase
MSKKWVYLFTEGNASMRDLLGGKGAGVAEMTRTGVPVPPGFTITTEACNEYYARGKQFPEGLWEQTLAALKVIEEQVGKKFGDPDNPLLVSVRSGARESMPGMMDTVLNLGLNKETLAGLARLTNNPRFAADAYRRFVQLFGKIVLGVDGEKFEHVMSEAKGRDRQDTDLTAEELMQIAETFKAIIKEDAGVDFPEDPYEQLRMAITAVFNSWMGRRAVDYRRVYKIPDTLGTGVNVQTMVFGNMGNDSATGVAFTRNPATGADELYGEYLVNAQGEDVVAGIRTPKPISKLREEMPEVYEQFSQIAKMLERHYKDVQDVEFTIERGKLWMLQTRNGKRTGMAAVKIAVDMVNEGLIDKRTALRRVQPEMLNQFLFPIVNPAAAEHATRLARGLAAGPGAAQGRIVLDPDEAAARSEQGERVILVRTETAPEDFHGMVASQAILTARGGLTSHAAVVARQLGKCCVCGCGDLEIDYKAGAVHVHGTDVILKDGDWITVDGHSGWVYAGQVETQEAEVIQVIRGQMKPEDSKLYGYFTTFLSWADEVRRLGVRANADTPTDARVARLFGAEGIGLCRTEHMFFEGDRIDAVREMIVADTPEDRRRALAKIEPLQQGDFEGIFEVMDGLPVTIRTLDPPLHEFLPHGDREIEELAHKMGIDVATLKAKIEGLREANPMLGFRGCRLGIEYPEITEMQARAIFHAAANCQARGIKVHPEIMIPLVGDVSELRMQGDIVRRVADEVMAETGQKIDYLLGTMIEVPRAALTADKIATIAEFFSFGTNDLTQMTFGMSRDDAGRFLPLYVERKLLKDDPFEVLDQEGVGQLVRMGVERGRSTRPDLKTGICGEHGGEPESVKFCHRVGLNYVSCSPYRVVIARLAAAQAVLEEQK
>NC_009767.1|WP_012120987.1|3197789_3199034_-|glycosyltransferase-family-4-protein
MRILMLSWEYPPHMVGGLGRHVTDLTDALAQISVEVHIVTPNLHHGASEERTAQGVYVHRVAIPPVADRTFFPLTQELNSALRHAALDLHCRIGGFDLIHAHDWLVAPAGMTLKRFCHAPLLATIHATERGRQQGHLTTDLSIQIDRLERLLASEAIRVIACSHFMAHEICTAFDTPREKIEVVPNGVVIRPAPFDSDEERLAFRRRFVRDDQQLVFSVGRIVYEKGLHLLVDAWSQVLMQFPQARLVIAGVGAYLDALRERAQRAGLADSILFTGRISDDERDRLYHAADAAVFPSLYEPFGIVALEAMAAKCPVIVAHTGGLAEVVKLHETGLTVYPNNVDSLAWGIRHTLAHPDWSQQRATNAFREVGARYNWQTIAQMTVEIYRRVCEEWRYVQRDALPAATLQYTSAYI
>NC_009767.1|WP_041330746.1|3199456_3200632_+|MFS-transporter
MFKNRLLLSISAGHFAVDVLNSVVPVLLAALAAPLALSNAQIGLALTLHIFAGALSQPLFGWLADRFSNRPAALAGVGVAWMAVCLAAISVSMNWTLIVLLVGLMALGSGLFHPIGTASAAASAPARAASATAIFFFSGQLGLSLGPLLGGALLGVTNGALPILALTALALVPAVFLFAAPRPVIPVGGTTRAAHAAVRVGVAILAAFVVLVALRSSIQSVFMSFLPKLFADRGWEPVAYGAIAGIFMFAAAIGNIIAGDIADRFGMRAATIWPLLVSVPAGLTCLWSPSPLTAFIACGVAGMVIGGQHSVLVVHAQRLLPVRQGFAAGLILGFTFATGGIGTALVGALADVVGLLPAMQGAVLLALPAAALALTLPGRESVTAVAAAAEA
>NC_009767.1|WP_012120989.1|3201010_3202318_-|AI-2E-family-transporter
MKTVEPQEEAIEAPSGIDEQPHDGDGSATDQGTTESLSATPVVPVIAWPAVPWRLIARWSLVALAVYSIGWMLWTTRPVLIPFIIGLVLAYLMAPAVDFFDRWMPRWLSILVVYILGFLGIAATFALIIPPLIEQVERLIHQLPSFREVQTFIDSIIRQYRDQVPPSLQQPIEDSLANLLRSLQNNIDTYLQRGGAFLLNQLIQLLNTVTFILGFISLPIWLFYVLYDKHRGRVFFNQLVHPRARSDFWNVWDIVNRVLGGYIRGQIILCVSVGLAVGIGLVGLEMLGFPLGDYILVLSLIAGVTEFIPVLGPTIGAIPGVILGFGISPTAGIAVLLLYIAVQQLENSLLVPRIIGESVGVHPAVLTVAMIVMGTLFGLFGILLAAPAVATVRDLFKYTYLRLEGCTPEESIRRVAADHAPIIHQGAAKQESQPS
>NC_009767.1|WP_012120990.1|3202403_3203330_+|nucleoside-hydrolase
MIMIRLVLDTDIGTDVDDCLALALILTSPEFHLEGVTCVYGDVLLRSRMVRKLLNLRGRTATPVFAGASQPLLELLPVYWAGHEGIGLLNESDHTLAPEADHAVDYLVRTVMSNPGQIHLAAIGPLTNVALALKREPRMVQALAGLTIMGGACRGYESLHINYVEHNIRCDPEAAHIVFSSGAPISLVPLDATLQTRIRPSDVERIRSAGTPFHVAVADQVALYPPFRARGFTHLHDPLAVATILSPDLVTWRALHVDVETGGRLTAGMTLMREPSDGVPDNARVALSVDAVRFEEWLLTRIAATVQP

Crispr_ID: NC_009767_63

• CRISPR_ID: NC_009767_63
• CRISPR_location: 3311351-3311549
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_63

Consensus_repeat	Method
GGTATCACCCCGTGCCTCGCGCAGATTCCTCGCTGCGCGCGGAATGACA	CRISPRCasFinder

spacers of NC_009767_63

>63.1|3311400|101|NC_009767|CRISPRCasFinder
CACATGCGGCATCGTCAAGCGTCATCGGTATCACCCCGTGCCTCGCGCAGATTCCTCGCTGCGCGCGGAATGACACACATGCGGCATCGTCACGCGTCATT

CRISPR arrays and Neighbor proteins around NC_009767_63

CRISPR arrays

The CRISPR arrays of NC_009767_63

>merge|NC_009767|63|3311351-3311549|CRISPRCasFinder
GGTATCACCCCGCGCCTCGCGCAGATTCCTCGCTGCGCTCGGAATGACACACATGCGGCATCGTCAAGCGTCATCGGTATCACCCCGTGCCTCGCGCAGATTCCTCGCTGCGCGCGGAATGACACACATGCGGCATCGTCACGCGTCATTGGTATCACCCCGCGCCTCGCGCAGATTCCTCGCTGCGCGCGGAATGACA

>NC_009767|63|54|3311351-3311549|CRISPRCasFinder
GGTATCACCCCGCGCCTCGCGCAGATTCCTCGCTGCGCTCGGAATGACA	CACATGCGGCATCGTCAAGCGTCATCGGTATCACCCCGTGCCTCGCGCAGATTCCTCGCTGCGCGCGGAATGACACACATGCGGCATCGTCACGCGTCATT
GGTATCACCCCGCGCCTCGCGCAGATTCCTCGCTGCGCGCGGAATGACA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121066.1|3304633_3305383_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041332007.1|3311718_3323187_-|laminin	unknown	unknown	gnl|CDD|379155
NC_009767.1|WP_012121081.1|3330433_3331063_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121080.1|3328179_3329424_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|379243
NC_009767.1|WP_012121070.1|3308055_3308655_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_009767.1|WP_012121071.1|3308789_3309371_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|237024
NC_009767.1|WP_012121075.1|3310714_3311017_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121077.1|3323721_3325365_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|238119
NC_009767.1|WP_012121073.1|3309693_3310296_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|237024
NC_009767.1|WP_157042833.1|3306564_3307569_-|ribokinase	unknown	unknown	gnl|CDD|238577
NC_009767.1|WP_157042644.1|3329680_3330031_+|hypothetical-protein	unknown	unknown	gnl|CDD|293898
NC_009767.1|WP_012121074.1|3310327_3310639_+|hypothetical-protein	unknown	unknown	gnl|CDD|379219
NC_009767.1|WP_012121072.1|3309389_3309650_+|zf-HC2-domain-containing-protein	unknown	unknown	gnl|CDD|379219
NC_009767.1|WP_012121082.1|3332274_3333363_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|366501
NC_009767.1|WP_012121069.1|3307708_3308050_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121079.1|3326374_3328063_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NC_009767.1|WP_083760309.1|3333364_3334753_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NC_009767.1|WP_012121078.1|3325606_3326359_-|hypothetical-protein	unknown	unknown	gnl|CDD|274008
NC_009767.1|WP_012121067.1|3305388_3306435_+|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl|CDD|236435
NC_009767.1|WP_041330763.1|3330155_3330434_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_041332007.1|3311718_3323187_-|laminin	gnl|CDD|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	4.98962e-24
NC_009767.1|WP_012121080.1|3328179_3329424_-|ABC-transporter-substrate-binding-protein	gnl|CDD|379243	pfam13531, SBP_bac_11, Bacterial extracellular solute-binding protein. This family includes bacterial extracellular solute-binding proteins.	1.31293e-13
NC_009767.1|WP_012121070.1|3308055_3308655_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.48669e-22
NC_009767.1|WP_012121071.1|3308789_3309371_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|237024	PRK11922, PRK11922, RNA polymerase sigma factor; Provisional.	5.29582e-43
NC_009767.1|WP_012121077.1|3323721_3325365_-|extracellular-solute-binding-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	2.55035e-26
NC_009767.1|WP_012121073.1|3309693_3310296_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|237024	PRK11922, PRK11922, RNA polymerase sigma factor; Provisional.	2.7029e-46
NC_009767.1|WP_157042833.1|3306564_3307569_-|ribokinase	gnl|CDD|238577	cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.	1.12998e-31
NC_009767.1|WP_157042644.1|3329680_3330031_+|hypothetical-protein	gnl|CDD|293898	cd03697, EFTU_II, Domain II of elongation factor Tu. Elongation factors Tu (EF-Tu) are three-domain GTPases with an essential function in the elongation phase of mRNA translation. The GTPase center of EF-Tu is in the N-terminal domain (domain I), also known as the catalytic or G-domain. The G-domain is composed of about 200 amino acid residues, arranged into a predominantly parallel six-stranded beta-sheet core surrounded by seven alpha helices. Non-catalytic domains II and III are beta-barrels of seven and six, respectively, antiparallel beta-strands that share an extended interface. Both non-catalytic domains are composed of about 100 amino acid residues. EF-Tu proteins exist in two principal conformations: a compact one, EF-Tu*GTP, with tight interfaces between all three domains and a high affinity for aminoacyl-tRNA; and an open one, EF-Tu*GDP, with essentially no G-domain-domain II interactions and a low affinity for aminoacyl-tRNA. EF-Tu has approximately a 100-fold higher affinity for GDP than for GTP.	1.30112e-26
NC_009767.1|WP_012121074.1|3310327_3310639_+|hypothetical-protein	gnl|CDD|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	2.13543e-08
NC_009767.1|WP_012121072.1|3309389_3309650_+|zf-HC2-domain-containing-protein	gnl|CDD|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	1.82664e-06
NC_009767.1|WP_012121082.1|3332274_3333363_-|methyltransferase-domain-containing-protein	gnl|CDD|366501	pfam01170, UPF0020, Putative RNA methylase family UPF0020. This domain is probably a methylase. It is associated with the THUMP domain that also occurs with RNA modification domains.	1.39721e-36
NC_009767.1|WP_012121079.1|3326374_3328063_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	3.72337e-26
NC_009767.1|WP_083760309.1|3333364_3334753_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.90725e-27
NC_009767.1|WP_012121078.1|3325606_3326359_-|hypothetical-protein	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.005028
NC_009767.1|WP_012121067.1|3305388_3306435_+|3-deoxy-7-phosphoheptulonate-synthase	gnl|CDD|236435	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated.	0

Protein sequences

>NC_009767.1|WP_012121075.1|3310714_3311017_+|hypothetical-protein
MIRDIEAFRASLSGDAPPPGLSGALQALWHDARGDWHAAHRAAQDDDSIDGAWVHAYLHRKEGDLANAGYWYRQAGRPVASGSLDAEWEQIARVLLLPDE
>NC_009767.1|WP_012121074.1|3310327_3310639_+|hypothetical-protein
MDAHHYLHDDPERCRDILAQLNDYLDGELAESLCRELEQHLAECPDCRTVYDTLSRTIHIYRALRDVPAELPQGVEERLIHRIKVSLNDGHLQHSDRHASTSD
>NC_009767.1|WP_012121073.1|3309693_3310296_+|sigma-70-family-RNA-polymerase-sigma-factor
MPGPTIELTIYENEEALLAGLRRRDPDSCACLIKRFAPLVYAQAIRLLGDADEAEGILQQTFIKACDKLDTYEGRSGLGSWLYRIATNEALMHLRQRSPHVNLADVAETIQEDEMPHRLTSWTFDPAAAALNSELRMVLEQALATLPEALRVVFVLRDIQGLSTEETAAALGLGESAVKVRLHRARLRLRELLSAYMQEH
>NC_009767.1|WP_012121072.1|3309389_3309650_+|zf-HC2-domain-containing-protein
MTCEELIAHLSSYIDHEMDAALVAEVQEHIAHCRNCRVVLDTTRRLIVLVHDEGQRVIPADQRSALFERLHQAFLKRPQASNESAV
>NC_009767.1|WP_012121071.1|3308789_3309371_+|sigma-70-family-RNA-polymerase-sigma-factor
MDDEATLINRLRQRDPQAFATFFETYADRVYRLAYGIVGSETDAEEVVQATFISALEAIERFEHHARLGTWLYRIAYNHALMILRRRRPEETLPDDDGALPLPSALKDWSVLPEERLLSREAQEMLRKAIMELPTTLRAAFICRDIEGLSTADCAQIIGISEGALKVRLHRARLTLRERVSEYFGEWVAPGNG
>NC_009767.1|WP_012121070.1|3308055_3308655_-|class-I-SAM-dependent-methyltransferase
MTDPTTRFQRLQQRYRDGDLPWDHDTPPPEVMAIAESLPPGRALDLGCGTGRACVYLAARGWHADGVDFIPEAIARAEERVHHAGVADRVRLFIASVTDLHFLREPYDLVIDVGCMHGMTAEELCAYAGEVARLTRSGGLYLLFAHLHDGTSSDTPRWIAKGMVEQLFAPDFEVERIEYGVTHVCDTSWPSAWYWLRRR
>NC_009767.1|WP_012121069.1|3307708_3308050_+|hypothetical-protein
MAMIRQALRTLRLIVGWICIIGGLIVSISPIPFGFVIVIAGIILVGPRDRGLRIVRAWWNRAIRSLASSSVPLVSALAKRIITFQSSIEMRIHQWTATRTTPRIAPQRAVAEE
>NC_009767.1|WP_157042833.1|3306564_3307569_-|ribokinase
MFRSARARVLVVGDFVLHRRLLIDPARIEYAEETGLPAHQVVAAETLPGAAGSIAAILRAFGTAVTTLGVIGDDGDGYELRRNLRKRGIDERAMVVAADRYTPTSIQPVIASGTSIPYEHERLDIRSRIPLASSTTMALIERLRALVTQVQAVLIVDDIPEEECGVVTRRLRLEIADLAARHRDVWFLATSQQRPGLFRQVIVMSNARECVRAVCANDSSNPPLALVGQAAEQLRQRTGKPVIVMLGVRGMLVVHEQGMIHAPSVPITGPIRPTGANDSAIAAVAAALCAGATMDEAVELGNLATAAVVRRTDTDEAPLQNQIIAMWWAYRKGE
>NC_009767.1|WP_012121067.1|3305388_3306435_+|3-deoxy-7-phosphoheptulonate-synthase
MQPVDNLHVLAFEPLTPPRALRERYPITEAAAQTVYETRESIKRIVRREDQRLLAVVGPCSIHDTGAALEYAGRLARLAGEMRDRIVIVMRAYFEKPRTTVGWRGLINDPHLDGSFDMNEGLRRARELLLRINDIGLPTATEMLDPISPQYITDLISLTAIGARTVESQTHRALASGLSMPVGYKNSTDGNVQVAVNAFLSARRAHSFLGIDQDGQSCVVRTTGNPDGMIILRGSSAGPNYDAATVVRTEQAMEAAGLLPAIMIDCSHANAGGDHTRQPHVWREVLRDHIASRNAVIGMMVESYLYEGKQPILADRSRLRYGVSVTDACVGWETTERMLIEAYEALKG
>NC_009767.1|WP_012121066.1|3304633_3305383_+|hypothetical-protein
MTLHLSAGEYVQRLRRIGLRPGERLVNNILHCGDAAVEPLIELATRVLLLYEEPPVAYAPIHALRLLGELRPLRMVEPLLKSVDAEFKSRGSAREIWQYEVPQMIGRIGAAVVAPLWSYIEDPACTPVERDGALLALAYATVIDKDVREPVIAELYRRLMQSDDRTLNAGIVRAIAYLGLADMYGDIMARYRASAVNQERMPASAARQMLLSQKTSGLANDAKLSLWERYDRFGPFPEPEDMNFDDDEE
>NC_009767.1|WP_041332007.1|3311718_3323187_-|laminin
MLKQRRFSLVSSAALIALITLLLLLIAVRLYPVVHPDPIRAAWQRALSAGAYRFDATITIVTDPTASPVNAGHPPERHEIYLKGNVDVPAEKVELRLWSQGGNVMTGEGSVMLRIIAGQTWVRQGEGAWEEYSGLGDLFAPGGDVLGYLNAVRDVQSLGEHDVSGRVMTRYAFRLDGMALERYLRERQQSALRRANRLPPGAELRPSDEYNRLSGTGEVWLDADGFPRRQMLNLVLPSGDDQPASRAQLTMDFFGFGPLPPGLPLSWQQWLSSLRAMSDAALPVSAALVLGLGAAIHLIRRRGSRWLVSSLSVTLIVSLVGDPLLTVQRIHAAQTAAVEQAVQRRQAQDGLERARSIETQLPPDVAAAHLMADVLLSEARGDATVDTDGDGLSDAQEALLGTNPQVAADGPARLTALTVQASTALSSAPASLVDDGRDTDGDGLTNFQEQFLGASPFDADTDGDGLSDFAEAVGFSYAARDWRLDPLAQDTNRDGVLDSLEVDRHGNLVQARDTDGDGIPNAFDYDDDNDGVVDRLDLSPLTHSADRGAFRGDRALWLKFDNLSVNRLVAVDIQVRPQDQRQLWYAQSRFDWPNDSAGQVQDRNSTTDDIQLLPLLEISIPSNSFATLPPYTNNGNGNLSSPILSAQGITLRQSDANTIVAYVPLSLVTDSQTGQRVAFSGRMLYQGAPAWGNAHRVRLVWAVQMKNDVDGFDQPGLIHVYASEPWLLTGMQVREDHGVAGALVVADPQAQGDAVARDDALLALINGLNQSFMHARADLSPAAIASRFHRLSNGSVPAQERWNLPNIFLASAYSRSDTLSLARDAATLNRGLLAQIPASDQPLILHLRSETFRALNFDSLGSNAVWSDTVLTMNLAAGGQNAVLVQTANYLSMTGYEFTGGDWRVLSPEQTVQRFVDRHRGQASADEETREGQLVLLRNYLAVLIQGVMALVANGEQRPMVGFASPDASLAQINTALAAQGAGALKHAIAALGPAQGSDTNSVLKMIGGIVKSLGISSVRGAAAAWAVSSKFMTSFKANAQNAIQGAIVAALVTGLILAATAHLGQFSPELNRWLLTGGMELVAHVTSSVATIVKNGIDLALIAKFGLQKITAASAALTIFVGGVLVVATIGLAIYEAVSNQLSGVALAQLIIATVLQVAWIVFLTALAFIPKVGFIIVAVITIIDAVLSVILSVILGRATTFSSWFFQQIARFIVDESRYLTVRPTVGGTSLGLLNPAAGMTAWNTLRFSATIYPNLAWNPNRIGNRWFGNPWNDWQARQRVSGAVSLADHEQNLSVSPGWPPIQGEYPRHFDFSFPAGINRSTALWMNTAFNLPYKRCIFLWCGAYDDVQRHNTRLADSVVFDVFPATLDEFVRMDWGGPVAFPPLPDADFDGLRREVDPNESTWDADGDGLGDAFEVRRANEGMRFNPRLADTDGDGLGDAVEARWGADPTRPDTDGDGLSDVLEVNGQFVTVSGRLVLIRTSPLAADSRGDGVSDAVWLNQGGSVAARSRLGAWPLSATFADSSGGIAFGCPPGNCPAAGVTVAGRTGTRFDGNQFLVMSDERFRLADEMTFAVWIYPTANANGILINREGEYEVARFPDGTIQWAFANANPGWAWINTGAVAPLNQWTHVTVTYNRGVVTTYLNGAAVHTYNGAGAISDVDWTQNELRLGDRQHTPQRFVGLLAHARLFNRALPAAEVSAQPGLSALAAFAPASTPAELTAPQAPIGVFPTANDDNLVVRPGQSLVYTVTLRYLPPDGRPLRGAVWLNTPRTSFPAQSFELLPGQEQSFVSNLTIPADAPEGPFVLDAITQYSLGGNPTARWVQPTFVERSGSDVSAAAAAASPGAAAPYALVTSSGGQIFFFAAQPTSLPAPVNVGSGTQPAVACQNGACLVVWQSSGTIRAARVADGVVSTPVTLGNGTAPAVASNGSGFVVAWLDNGVVRTQRVAANGAVTGSLLTLDSNAQSGSAVAVAAAGANYVIAYERGTASQRDIWLVQLDNAGASAPVQVTATSDDETKPALAHHAAFGRVLLVYLRNGSVVGRLLDGTAVLAEAPLLSDGRVDLTNLAVTAAADHFVVAASTRMDNRAHLLYQAVDGQNRLLGSPQRFAWLTDAPSGLSAALACATGQPCVVALAGLSGSGGTQIGTLQAQIVGEESGLLDSGTLPAPLRLVVDNTPPVASIVSLVDGSYVPAANVNSGLVVSGVITDANPLKQVEISLNNGPWQAVTPGATWAATIDVGSLPEGAHTLRVRAGDAAGNQGAPSAPVTFLVDRTPPALALTPDVPVGTVRPTLDARGGWVFPLAGTLNDAASGSAQLTIELLPASAGAVTSASQEVTATGGLWQHNYRLITGGGLDGRVTPPTGAYTVTLRAADLAGNVLMLERPTLLRLDATPPAFTLTTDPGESITTTLTLTGIVTDTGSVASGVQSLEAAWAPLEQADALAGAAVRLPFDEPVGSEAFADAVDAALIATCSGANCPQVVANGRVGQGLNLSSSHTLTMTDRLGDLSSFSVAAWFDGSGRVFERGQAGQAGYVELTTSSAQLRGNSGACSVSFTPTGTGWRHVAATYDGTALTVYGDNVAVATTPCAVGALPAADARLGGFTGRIDEVYLYGYALAADEVTHLRAAADQNWESVTLTTPGAAASAWSMPVPPNLDGMYALVMRATDALGNRTVDPAGVIVWRGMVDQRGPQVTVTVAQQGSGALARTTITCQARDINLASVTLDCPVPGGTILEQNDSLVYYQPPAWRRLSDELRLLHGRDVTYVVDGHITYTTPATAQDTLGRTGNGTPQPVTPPAPVVDLLVTSPTGNVFTTLDPITVAGNVRADAGLNRVRVLVNGGQIFEQTWTGDLTGAFSTSWTPPAEGRYALEVQVTDQSSRLATRQITLFVDTAPPTALGFATPVLTTANTLSDTLALPIQVADTGVITRMQASFDGSTWIDATPDPSMSGRWWAPLNQPANDLDNWSFTMDLRAMDAAGRVITATAQPMVVDVRPPAAQTATLRLIGGATLSNGAIVRTAGVGLRMEWVAGSDNAGPVTFRAGWSTDREPNLAGLTAYGAGAGSHDLPTPPEGSILYAHLVQQDANGNQRIQTFGPIIYDTRLTPDAVSQTGAPLPERAIATGWLDGPCALVGQNSALSRRASELAATRDVQRLFAGWDDRALRLAWRGAIWGASEDLYLYLDTATGGATAVYTQGMSSGQPDLRLPAGFAPDYLLRVDDAQTIGLLRWNGAAWVAVSGAWQAWSDAAQPDLFEAYLPFATLDITSPATTPVSLVAYATEEDSLRIWSVMPANNPLTSPRVLNSRSSEAINNQIALTNAIAWSNLGSGVCPGEGQIVADVRFRITATPVGAIYSIFTDEMINAQELLYDDSSQVDSQQLAEIDNYHPSLFEGQTITYTIHYENVGEALATNVQAWIVNWGSLRLPGGNLVIGSGGPYYEQFINLGTIAPNSSGTVTFTGVVDRQVARDASEDEEWATVDVSFHDDTTGFDDALDWFFVDHPVDIEPPVHVVINDPSAYVKPGHVTVSGEAWDESDVPQIEIEVRVGMATPTITPCTDLTPDDGEWRCAVNIGAPADGTPVAMRARATDAGGQTSDWSDPVALIVDANAPRLILSDASVARLGIGSVSVGTVQLDGRVEDNRSARAVEICVDQQDGRGFQCEEVEVDENDNWSYALPVREGVAQAPQHVRLTPIDLAGNRGSAQQFTYVIDTVAPAVTGGLLPPTSPLLTVSSVIGGNYADAVGVTGITVRVERPDGLVENGAADLQGNQWRYVASLSVPGAHRIYITARDAAGNTRTIGPLQINGPYRVFMPVIAR
>NC_009767.1|WP_012121077.1|3323721_3325365_-|extracellular-solute-binding-protein
MRHARRSCTPFVLLLIIGLIASACGDLNVGDGAPANAITITIAYSPEKEEWLKDRIAAFNRSRVQVDGRPVVVEGINKSSGAARTEIRNGQLTTTIWSPSASTWLEVLKYEGGNPNVAVSNQPLVLTPVVISMWRPMAEAMGWPDKPIGWSDMLALIEDPQGWGAYGHPEWGRFSWGHTDPEISTTALSTLLAEFYAATGKQRDLTVADIQKPESQEFIRKLGQGIKHYGYNTLVFSENMRKFGMGYISAFPMEEITLIDFNKNKNPPTPLVAIYPREGTFWHDNPFILMTSASDQERRAAEQFYDFLLSDESQRLAMSYGFRPANVNVPLSDPISLAYGVQPQGVQSVLPVPPAEVIVAAKNAWSLNRKRADILLVVDVSGSMEGDKLEAAKAGLGTFLSRILPEDRVGLVTFSTESRLVVPPAPLSDTRIRLDDAIAVMRAQGRTALYDALIDGKEALDSLPSTGDDRIRAIVLLSDGLDNSSRATLEQVRLAFEESGISIFPVAYGADADTDALQQIATFSRTILVQGDAGDIGQIFENLSRYF
>NC_009767.1|WP_012121078.1|3325606_3326359_-|hypothetical-protein
MNMTLLLLVARQPLAITVLIVAIIAGLTIALWLLPLGLLAYALMIFFSLRDPVLIDAARRPPPTPRPRLTSPTFRAQIEAIERTQQEIARSAAQAGGPLARLLLPIADQGRELVEEAYLLADKGQIIERYLASVDRHKLEQDIATIDRQMRATQDPYTLTQLEETRRARLEKIQNVHDLDTYIGRISAQLQNISASLDNVLAETVRLRTADAASASSATGQVARRLADLKSDMDAFQAVLDTALARSGAV
>NC_009767.1|WP_012121079.1|3326374_3328063_-|VWA-domain-containing-protein
MRHPFRWLLILVLLTPLLAACGAGGGDGGFLGGNTVEVSIAYGSEKRAWLEEAVRQFNAAGRKTASGASIQVVATPMGSTDSMNQILSGAIQPTVWSPASRILLPVANDEWGKRNNGATLVDENAPLLVLSPVVIAMWKPMAEALGWPNKPLGWSDIAELSASGKTWADFGRPEWGPLQFGHTHPDYSNSGVATIIAISYAAAEKTRGLTVADVQNPKTAEFMRNIESGVIHYGESTGFFADQMFNRGPGYLSAAVLYENLVIEAYNRDRYPSVSLPVVAIYPKEGTFWTDHPYAILNAPWVTDEQREAANIFLRYLLDRPQQELALRYGYRPSNTDVAVGAPITPENGVDPQQPQTLLEVPRPDVLSAIRSIWEQNKKRVDVMAVLDVSGSMEDEGRLEQAKAALRIFVEQLQDDDGFGLTIFSDQATVLTPISPIGSRRTEVLNRIAGLTPRGGTRLLDTVVEAYQELTATPPGQRIRAVVVLTDGLDNRSQRSAEDVLDLLRQDREGYSIKVFTIAFGGDADVHLLKEIASATGAKSYVGKPGERGAIERIYQDITTFF
>NC_009767.1|WP_012121080.1|3328179_3329424_-|ABC-transporter-substrate-binding-protein
MQPITRAIGFGYLLICLLALIASAFVGPVGYAPFPIPLGPAQEPVVVTIWYGTEKKLWLEDAAQRFAATNPRVGNRPIRIVLRGIGSRELSLRAARQEFGGDGQPTVISPASSIWVEVAKADWAALNPGSRPFVIDRPDQAAPLALTPLVAVAWKERADVLWPAGPVNFWQNLHDALSNEEGWVGVAKANGFAPGSPEYEKARSWGFVKFGHTSPLTSNSGAQALVLMAYGYHSKSKGLMNADILDPGFQQWMREIEMAVLEFGDSTGTFMTSMVQFGPSKYDIVLVYENLALENVEAAQRRWGDIRIYYPPVTMFSDHPYAILNTPWVTPEQQRAAEQFRDFLLSQPIQEIAFQQYGFRPANPEVPVLTNDASNPFNKYRAYGAQVDTPPLVETPSGDVVTTLLDLWRRQINR
>NC_009767.1|WP_157042644.1|3329680_3330031_+|hypothetical-protein
MTAHSYKPSHQGKLSLCLSNLFFHLTVRDVSAIRGRGTVVTGQVESSVLKVGDNIQITRPGATKTSMVIGIESFGKQMNQARMGDNIGVLLRDISKQDVQHGDIMVAADSKFTWRP
>NC_009767.1|WP_041330763.1|3330155_3330434_+|hypothetical-protein
MLKLFICDSDMWLLYFRFDDQGQIVTMHVRCRLKRDAESILQLARQRGLTPTAKLVEYALFRAGATIQAYTVPNFHYFTEETFRSQWEKAVH
>NC_009767.1|WP_012121081.1|3330433_3331063_+|hypothetical-protein
MAVYRILVKKQLHSHSWSNAYVVVSAAPYTQNELIHVADAIAPRFVAFERYFHSEEVQIVETVTTAILSPPIGDAFARRPAALNGWNHHTLSGLRPITVKASLGFAFTLVLGLQPVANRWGVKYYRYALQRDEIQSTFSGYQLTMESRDWLEHMLTTAKQELLPLMGADPNVLSFALHAAEQEHNPSAYKYRYVRDIIVKGVAVLKSRR
>NC_009767.1|WP_012121082.1|3332274_3333363_-|methyltransferase-domain-containing-protein
MPSTRHTFIAQTQPGFEAIAATEITARLDGAQFIDLRSVADKNGMVRFAFSGDPRDLLQLRTVEDVFVVAAEARDLAPGFAALRQLAHLAATAPGIERAIHLVRRVDPRRGGEGRIHYRVIARQVGRLPYRRVDAQVAVERGIAARPDHRWRLVADGGIEFWLVQWPGEALLMVRLSDERMRHRDYKVEHLPASLRPAAAAALAWLTTPRDDDRFLDPMCGAGTILIERAHLGRYRALIGGDIDPEAVATARANIGSRYKPVSIHEWDARRLPLDAGSVTALAVNLPFGAQMGSLEENRTLYPEFLREAARVLRPGARLVALSGDARTLSDALRRNNRLARCATYPVLILGRRAVIVVAERG
>NC_009767.1|WP_083760309.1|3333364_3334753_-|MFS-transporter
MPVSGGGGAGVGDGQRLSDTIHPAAWCRLGSSAILCGIAFVVRWRNCATEQTIVDRHTTNRNLRLLVIELFWASIAIACYSFAAAFLIQLGGSNLMVSLLTSAAALVNALTSIPFAMFLERIGNRRPWIIGSLLALRLGHIGLIFVPFLPAYRAEAMVALLLLINVPVALFNAGWLPMLGDIVPLAQRARLFSARNMTMGITVMTTTFLMGRWLDAAPFPANYQLMFALAVVASLLSTVYVARLTIPPSPVVERTAGRHRPTFVEVRALLRQQRSFANITINTLIFNIAFWMGTPLQPIYFVRELGASDGWLGVWLALISGGQIIGNLVWPRLIEKRGYSWVLLRAATASALYYFLIGAVPDLTLILLFALLFGAVSPGVEISHFNILLEVCPPERRAFSIGVFVTVMNVGFFVATLACAPLIDLVGAQALVLILAGVRLIGALLFVVNPVRAATIEIAKVH

Crispr_ID: NC_009767_64

• CRISPR_ID: NC_009767_64
• CRISPR_location: 3331285-3331381
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_64

Consensus_repeat	Method
AAAGCCCTCGCTAAGCACGTGCAAG	CRISPRCasFinder

spacers of NC_009767_64

>64.1|3331310|47|NC_009767|CRISPRCasFinder
TAAAATAGACGAATCAAGCGAGTAAGTGGAAAAAGGCGCTGCGGGCT

CRISPR arrays and Neighbor proteins around NC_009767_64

CRISPR arrays

The CRISPR arrays of NC_009767_64

>merge|NC_009767|64|3331285-3331381|CRISPRCasFinder
AAAGCCCTCGCTAAGCACGTGCAAGTAAAATAGACGAATCAAGCGAGTAAGTGGAAAAAGGCGCTGCGGGCTAAAGCCCTCGCTGAGCACGTGCAAG

>NC_009767|64|55|3331285-3331381|CRISPRCasFinder
AAAGCCCTCGCTAAGCACGTGCAAG	TAAAATAGACGAATCAAGCGAGTAAGTGGAAAAAGGCGCTGCGGGCT
AAAGCCCTCGCTGAGCACGTGCAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_041332007.1|3311718_3323187_-|laminin	unknown	unknown	gnl|CDD|379155
NC_009767.1|WP_041330765.1|3337956_3338187_-|hypothetical-protein	unknown	unknown	gnl|CDD|273148
NC_009767.1|WP_012121081.1|3330433_3331063_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121080.1|3328179_3329424_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|379243
NC_009767.1|WP_012121082.1|3332274_3333363_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|366501
NC_009767.1|WP_012121075.1|3310714_3311017_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121077.1|3323721_3325365_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|238119
NC_009767.1|WP_012121087.1|3340497_3340929_-|EamA-family-transporter	unknown	unknown	gnl|CDD|225308
NC_009767.1|WP_157042644.1|3329680_3330031_+|hypothetical-protein	unknown	unknown	gnl|CDD|293898
NC_009767.1|WP_012121074.1|3310327_3310639_+|hypothetical-protein	unknown	unknown	gnl|CDD|379219
NC_009767.1|WP_012121086.1|3338656_3340474_-|SLC13-family-permease	unknown	unknown	gnl|CDD|238535
NC_009767.1|WP_012121088.1|3340944_3341463_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330763.1|3330155_3330434_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121091.1|3344931_3346044_-|glucose-1-dehydrogenase	unknown	unknown	gnl|CDD|176192
NC_009767.1|WP_012121084.1|3335020_3337807_+|hypothetical-protein	unknown	unknown	gnl|CDD|224117
NC_009767.1|WP_012121079.1|3326374_3328063_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NC_009767.1|WP_083760309.1|3333364_3334753_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NC_009767.1|WP_012121090.1|3342526_3344935_-|glucan-1,4-alpha-glucosidase	unknown	unknown	gnl|CDD|130598
NC_009767.1|WP_012121078.1|3325606_3326359_-|hypothetical-protein	unknown	unknown	gnl|CDD|274008
NC_009767.1|WP_012121089.1|3341472_3342519_-|AI-2E-family-transporter	unknown	unknown	gnl|CDD|223701

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_041332007.1|3311718_3323187_-|laminin	gnl|CDD|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	4.98962e-24
NC_009767.1|WP_041330765.1|3337956_3338187_-|hypothetical-protein	gnl|CDD|273148	TIGR00575, DNA_ligase, DNA ligase, NAD-dependent. All proteins in this family with known functions are NAD-dependent DNA ligases. Functions of these proteins include DNA repair, DNA replication, and DNA recombination. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The member of this family from Treponema pallidum differs in having three rather than just one copy of the BRCT (BRCA1 C Terminus) domain (pfam00533) at the C-terminus. It is included in the seed. [DNA metabolism, DNA replication, recombination, and repair].	3.79944e-06
NC_009767.1|WP_012121080.1|3328179_3329424_-|ABC-transporter-substrate-binding-protein	gnl|CDD|379243	pfam13531, SBP_bac_11, Bacterial extracellular solute-binding protein. This family includes bacterial extracellular solute-binding proteins.	1.31293e-13
NC_009767.1|WP_012121082.1|3332274_3333363_-|methyltransferase-domain-containing-protein	gnl|CDD|366501	pfam01170, UPF0020, Putative RNA methylase family UPF0020. This domain is probably a methylase. It is associated with the THUMP domain that also occurs with RNA modification domains.	1.39721e-36
NC_009767.1|WP_012121077.1|3323721_3325365_-|extracellular-solute-binding-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	2.55035e-26
NC_009767.1|WP_012121087.1|3340497_3340929_-|EamA-family-transporter	gnl|CDD|225308	COG2510, COG2510, Predicted membrane protein [Function unknown].	4.33423e-43
NC_009767.1|WP_157042644.1|3329680_3330031_+|hypothetical-protein	gnl|CDD|293898	cd03697, EFTU_II, Domain II of elongation factor Tu. Elongation factors Tu (EF-Tu) are three-domain GTPases with an essential function in the elongation phase of mRNA translation. The GTPase center of EF-Tu is in the N-terminal domain (domain I), also known as the catalytic or G-domain. The G-domain is composed of about 200 amino acid residues, arranged into a predominantly parallel six-stranded beta-sheet core surrounded by seven alpha helices. Non-catalytic domains II and III are beta-barrels of seven and six, respectively, antiparallel beta-strands that share an extended interface. Both non-catalytic domains are composed of about 100 amino acid residues. EF-Tu proteins exist in two principal conformations: a compact one, EF-Tu*GTP, with tight interfaces between all three domains and a high affinity for aminoacyl-tRNA; and an open one, EF-Tu*GDP, with essentially no G-domain-domain II interactions and a low affinity for aminoacyl-tRNA. EF-Tu has approximately a 100-fold higher affinity for GDP than for GTP.	1.30112e-26
NC_009767.1|WP_012121074.1|3310327_3310639_+|hypothetical-protein	gnl|CDD|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	2.13543e-08
NC_009767.1|WP_012121086.1|3338656_3340474_-|SLC13-family-permease	gnl|CDD|238535	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.	7.12423e-35
NC_009767.1|WP_012121091.1|3344931_3346044_-|glucose-1-dehydrogenase	gnl|CDD|176192	cd08230, glucose_DH, Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	1.33696e-167
NC_009767.1|WP_012121084.1|3335020_3337807_+|hypothetical-protein	gnl|CDD|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	3.23847e-09
NC_009767.1|WP_012121079.1|3326374_3328063_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	3.72337e-26
NC_009767.1|WP_083760309.1|3333364_3334753_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.90725e-27
NC_009767.1|WP_012121090.1|3342526_3344935_-|glucan-1,4-alpha-glucosidase	gnl|CDD|130598	TIGR01535, glucan_glucosid, glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NC_009767.1|WP_012121078.1|3325606_3326359_-|hypothetical-protein	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.005028
NC_009767.1|WP_012121089.1|3341472_3342519_-|AI-2E-family-transporter	gnl|CDD|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	5.06542e-35

Protein sequences

>NC_009767.1|WP_012121081.1|3330433_3331063_+|hypothetical-protein
MAVYRILVKKQLHSHSWSNAYVVVSAAPYTQNELIHVADAIAPRFVAFERYFHSEEVQIVETVTTAILSPPIGDAFARRPAALNGWNHHTLSGLRPITVKASLGFAFTLVLGLQPVANRWGVKYYRYALQRDEIQSTFSGYQLTMESRDWLEHMLTTAKQELLPLMGADPNVLSFALHAAEQEHNPSAYKYRYVRDIIVKGVAVLKSRR
>NC_009767.1|WP_041330763.1|3330155_3330434_+|hypothetical-protein
MLKLFICDSDMWLLYFRFDDQGQIVTMHVRCRLKRDAESILQLARQRGLTPTAKLVEYALFRAGATIQAYTVPNFHYFTEETFRSQWEKAVH
>NC_009767.1|WP_157042644.1|3329680_3330031_+|hypothetical-protein
MTAHSYKPSHQGKLSLCLSNLFFHLTVRDVSAIRGRGTVVTGQVESSVLKVGDNIQITRPGATKTSMVIGIESFGKQMNQARMGDNIGVLLRDISKQDVQHGDIMVAADSKFTWRP
>NC_009767.1|WP_012121080.1|3328179_3329424_-|ABC-transporter-substrate-binding-protein
MQPITRAIGFGYLLICLLALIASAFVGPVGYAPFPIPLGPAQEPVVVTIWYGTEKKLWLEDAAQRFAATNPRVGNRPIRIVLRGIGSRELSLRAARQEFGGDGQPTVISPASSIWVEVAKADWAALNPGSRPFVIDRPDQAAPLALTPLVAVAWKERADVLWPAGPVNFWQNLHDALSNEEGWVGVAKANGFAPGSPEYEKARSWGFVKFGHTSPLTSNSGAQALVLMAYGYHSKSKGLMNADILDPGFQQWMREIEMAVLEFGDSTGTFMTSMVQFGPSKYDIVLVYENLALENVEAAQRRWGDIRIYYPPVTMFSDHPYAILNTPWVTPEQQRAAEQFRDFLLSQPIQEIAFQQYGFRPANPEVPVLTNDASNPFNKYRAYGAQVDTPPLVETPSGDVVTTLLDLWRRQINR
>NC_009767.1|WP_012121079.1|3326374_3328063_-|VWA-domain-containing-protein
MRHPFRWLLILVLLTPLLAACGAGGGDGGFLGGNTVEVSIAYGSEKRAWLEEAVRQFNAAGRKTASGASIQVVATPMGSTDSMNQILSGAIQPTVWSPASRILLPVANDEWGKRNNGATLVDENAPLLVLSPVVIAMWKPMAEALGWPNKPLGWSDIAELSASGKTWADFGRPEWGPLQFGHTHPDYSNSGVATIIAISYAAAEKTRGLTVADVQNPKTAEFMRNIESGVIHYGESTGFFADQMFNRGPGYLSAAVLYENLVIEAYNRDRYPSVSLPVVAIYPKEGTFWTDHPYAILNAPWVTDEQREAANIFLRYLLDRPQQELALRYGYRPSNTDVAVGAPITPENGVDPQQPQTLLEVPRPDVLSAIRSIWEQNKKRVDVMAVLDVSGSMEDEGRLEQAKAALRIFVEQLQDDDGFGLTIFSDQATVLTPISPIGSRRTEVLNRIAGLTPRGGTRLLDTVVEAYQELTATPPGQRIRAVVVLTDGLDNRSQRSAEDVLDLLRQDREGYSIKVFTIAFGGDADVHLLKEIASATGAKSYVGKPGERGAIERIYQDITTFF
>NC_009767.1|WP_012121078.1|3325606_3326359_-|hypothetical-protein
MNMTLLLLVARQPLAITVLIVAIIAGLTIALWLLPLGLLAYALMIFFSLRDPVLIDAARRPPPTPRPRLTSPTFRAQIEAIERTQQEIARSAAQAGGPLARLLLPIADQGRELVEEAYLLADKGQIIERYLASVDRHKLEQDIATIDRQMRATQDPYTLTQLEETRRARLEKIQNVHDLDTYIGRISAQLQNISASLDNVLAETVRLRTADAASASSATGQVARRLADLKSDMDAFQAVLDTALARSGAV
>NC_009767.1|WP_012121077.1|3323721_3325365_-|extracellular-solute-binding-protein
MRHARRSCTPFVLLLIIGLIASACGDLNVGDGAPANAITITIAYSPEKEEWLKDRIAAFNRSRVQVDGRPVVVEGINKSSGAARTEIRNGQLTTTIWSPSASTWLEVLKYEGGNPNVAVSNQPLVLTPVVISMWRPMAEAMGWPDKPIGWSDMLALIEDPQGWGAYGHPEWGRFSWGHTDPEISTTALSTLLAEFYAATGKQRDLTVADIQKPESQEFIRKLGQGIKHYGYNTLVFSENMRKFGMGYISAFPMEEITLIDFNKNKNPPTPLVAIYPREGTFWHDNPFILMTSASDQERRAAEQFYDFLLSDESQRLAMSYGFRPANVNVPLSDPISLAYGVQPQGVQSVLPVPPAEVIVAAKNAWSLNRKRADILLVVDVSGSMEGDKLEAAKAGLGTFLSRILPEDRVGLVTFSTESRLVVPPAPLSDTRIRLDDAIAVMRAQGRTALYDALIDGKEALDSLPSTGDDRIRAIVLLSDGLDNSSRATLEQVRLAFEESGISIFPVAYGADADTDALQQIATFSRTILVQGDAGDIGQIFENLSRYF
>NC_009767.1|WP_041332007.1|3311718_3323187_-|laminin
MLKQRRFSLVSSAALIALITLLLLLIAVRLYPVVHPDPIRAAWQRALSAGAYRFDATITIVTDPTASPVNAGHPPERHEIYLKGNVDVPAEKVELRLWSQGGNVMTGEGSVMLRIIAGQTWVRQGEGAWEEYSGLGDLFAPGGDVLGYLNAVRDVQSLGEHDVSGRVMTRYAFRLDGMALERYLRERQQSALRRANRLPPGAELRPSDEYNRLSGTGEVWLDADGFPRRQMLNLVLPSGDDQPASRAQLTMDFFGFGPLPPGLPLSWQQWLSSLRAMSDAALPVSAALVLGLGAAIHLIRRRGSRWLVSSLSVTLIVSLVGDPLLTVQRIHAAQTAAVEQAVQRRQAQDGLERARSIETQLPPDVAAAHLMADVLLSEARGDATVDTDGDGLSDAQEALLGTNPQVAADGPARLTALTVQASTALSSAPASLVDDGRDTDGDGLTNFQEQFLGASPFDADTDGDGLSDFAEAVGFSYAARDWRLDPLAQDTNRDGVLDSLEVDRHGNLVQARDTDGDGIPNAFDYDDDNDGVVDRLDLSPLTHSADRGAFRGDRALWLKFDNLSVNRLVAVDIQVRPQDQRQLWYAQSRFDWPNDSAGQVQDRNSTTDDIQLLPLLEISIPSNSFATLPPYTNNGNGNLSSPILSAQGITLRQSDANTIVAYVPLSLVTDSQTGQRVAFSGRMLYQGAPAWGNAHRVRLVWAVQMKNDVDGFDQPGLIHVYASEPWLLTGMQVREDHGVAGALVVADPQAQGDAVARDDALLALINGLNQSFMHARADLSPAAIASRFHRLSNGSVPAQERWNLPNIFLASAYSRSDTLSLARDAATLNRGLLAQIPASDQPLILHLRSETFRALNFDSLGSNAVWSDTVLTMNLAAGGQNAVLVQTANYLSMTGYEFTGGDWRVLSPEQTVQRFVDRHRGQASADEETREGQLVLLRNYLAVLIQGVMALVANGEQRPMVGFASPDASLAQINTALAAQGAGALKHAIAALGPAQGSDTNSVLKMIGGIVKSLGISSVRGAAAAWAVSSKFMTSFKANAQNAIQGAIVAALVTGLILAATAHLGQFSPELNRWLLTGGMELVAHVTSSVATIVKNGIDLALIAKFGLQKITAASAALTIFVGGVLVVATIGLAIYEAVSNQLSGVALAQLIIATVLQVAWIVFLTALAFIPKVGFIIVAVITIIDAVLSVILSVILGRATTFSSWFFQQIARFIVDESRYLTVRPTVGGTSLGLLNPAAGMTAWNTLRFSATIYPNLAWNPNRIGNRWFGNPWNDWQARQRVSGAVSLADHEQNLSVSPGWPPIQGEYPRHFDFSFPAGINRSTALWMNTAFNLPYKRCIFLWCGAYDDVQRHNTRLADSVVFDVFPATLDEFVRMDWGGPVAFPPLPDADFDGLRREVDPNESTWDADGDGLGDAFEVRRANEGMRFNPRLADTDGDGLGDAVEARWGADPTRPDTDGDGLSDVLEVNGQFVTVSGRLVLIRTSPLAADSRGDGVSDAVWLNQGGSVAARSRLGAWPLSATFADSSGGIAFGCPPGNCPAAGVTVAGRTGTRFDGNQFLVMSDERFRLADEMTFAVWIYPTANANGILINREGEYEVARFPDGTIQWAFANANPGWAWINTGAVAPLNQWTHVTVTYNRGVVTTYLNGAAVHTYNGAGAISDVDWTQNELRLGDRQHTPQRFVGLLAHARLFNRALPAAEVSAQPGLSALAAFAPASTPAELTAPQAPIGVFPTANDDNLVVRPGQSLVYTVTLRYLPPDGRPLRGAVWLNTPRTSFPAQSFELLPGQEQSFVSNLTIPADAPEGPFVLDAITQYSLGGNPTARWVQPTFVERSGSDVSAAAAAASPGAAAPYALVTSSGGQIFFFAAQPTSLPAPVNVGSGTQPAVACQNGACLVVWQSSGTIRAARVADGVVSTPVTLGNGTAPAVASNGSGFVVAWLDNGVVRTQRVAANGAVTGSLLTLDSNAQSGSAVAVAAAGANYVIAYERGTASQRDIWLVQLDNAGASAPVQVTATSDDETKPALAHHAAFGRVLLVYLRNGSVVGRLLDGTAVLAEAPLLSDGRVDLTNLAVTAAADHFVVAASTRMDNRAHLLYQAVDGQNRLLGSPQRFAWLTDAPSGLSAALACATGQPCVVALAGLSGSGGTQIGTLQAQIVGEESGLLDSGTLPAPLRLVVDNTPPVASIVSLVDGSYVPAANVNSGLVVSGVITDANPLKQVEISLNNGPWQAVTPGATWAATIDVGSLPEGAHTLRVRAGDAAGNQGAPSAPVTFLVDRTPPALALTPDVPVGTVRPTLDARGGWVFPLAGTLNDAASGSAQLTIELLPASAGAVTSASQEVTATGGLWQHNYRLITGGGLDGRVTPPTGAYTVTLRAADLAGNVLMLERPTLLRLDATPPAFTLTTDPGESITTTLTLTGIVTDTGSVASGVQSLEAAWAPLEQADALAGAAVRLPFDEPVGSEAFADAVDAALIATCSGANCPQVVANGRVGQGLNLSSSHTLTMTDRLGDLSSFSVAAWFDGSGRVFERGQAGQAGYVELTTSSAQLRGNSGACSVSFTPTGTGWRHVAATYDGTALTVYGDNVAVATTPCAVGALPAADARLGGFTGRIDEVYLYGYALAADEVTHLRAAADQNWESVTLTTPGAAASAWSMPVPPNLDGMYALVMRATDALGNRTVDPAGVIVWRGMVDQRGPQVTVTVAQQGSGALARTTITCQARDINLASVTLDCPVPGGTILEQNDSLVYYQPPAWRRLSDELRLLHGRDVTYVVDGHITYTTPATAQDTLGRTGNGTPQPVTPPAPVVDLLVTSPTGNVFTTLDPITVAGNVRADAGLNRVRVLVNGGQIFEQTWTGDLTGAFSTSWTPPAEGRYALEVQVTDQSSRLATRQITLFVDTAPPTALGFATPVLTTANTLSDTLALPIQVADTGVITRMQASFDGSTWIDATPDPSMSGRWWAPLNQPANDLDNWSFTMDLRAMDAAGRVITATAQPMVVDVRPPAAQTATLRLIGGATLSNGAIVRTAGVGLRMEWVAGSDNAGPVTFRAGWSTDREPNLAGLTAYGAGAGSHDLPTPPEGSILYAHLVQQDANGNQRIQTFGPIIYDTRLTPDAVSQTGAPLPERAIATGWLDGPCALVGQNSALSRRASELAATRDVQRLFAGWDDRALRLAWRGAIWGASEDLYLYLDTATGGATAVYTQGMSSGQPDLRLPAGFAPDYLLRVDDAQTIGLLRWNGAAWVAVSGAWQAWSDAAQPDLFEAYLPFATLDITSPATTPVSLVAYATEEDSLRIWSVMPANNPLTSPRVLNSRSSEAINNQIALTNAIAWSNLGSGVCPGEGQIVADVRFRITATPVGAIYSIFTDEMINAQELLYDDSSQVDSQQLAEIDNYHPSLFEGQTITYTIHYENVGEALATNVQAWIVNWGSLRLPGGNLVIGSGGPYYEQFINLGTIAPNSSGTVTFTGVVDRQVARDASEDEEWATVDVSFHDDTTGFDDALDWFFVDHPVDIEPPVHVVINDPSAYVKPGHVTVSGEAWDESDVPQIEIEVRVGMATPTITPCTDLTPDDGEWRCAVNIGAPADGTPVAMRARATDAGGQTSDWSDPVALIVDANAPRLILSDASVARLGIGSVSVGTVQLDGRVEDNRSARAVEICVDQQDGRGFQCEEVEVDENDNWSYALPVREGVAQAPQHVRLTPIDLAGNRGSAQQFTYVIDTVAPAVTGGLLPPTSPLLTVSSVIGGNYADAVGVTGITVRVERPDGLVENGAADLQGNQWRYVASLSVPGAHRIYITARDAAGNTRTIGPLQINGPYRVFMPVIAR
>NC_009767.1|WP_012121075.1|3310714_3311017_+|hypothetical-protein
MIRDIEAFRASLSGDAPPPGLSGALQALWHDARGDWHAAHRAAQDDDSIDGAWVHAYLHRKEGDLANAGYWYRQAGRPVASGSLDAEWEQIARVLLLPDE
>NC_009767.1|WP_012121074.1|3310327_3310639_+|hypothetical-protein
MDAHHYLHDDPERCRDILAQLNDYLDGELAESLCRELEQHLAECPDCRTVYDTLSRTIHIYRALRDVPAELPQGVEERLIHRIKVSLNDGHLQHSDRHASTSD
>NC_009767.1|WP_012121082.1|3332274_3333363_-|methyltransferase-domain-containing-protein
MPSTRHTFIAQTQPGFEAIAATEITARLDGAQFIDLRSVADKNGMVRFAFSGDPRDLLQLRTVEDVFVVAAEARDLAPGFAALRQLAHLAATAPGIERAIHLVRRVDPRRGGEGRIHYRVIARQVGRLPYRRVDAQVAVERGIAARPDHRWRLVADGGIEFWLVQWPGEALLMVRLSDERMRHRDYKVEHLPASLRPAAAAALAWLTTPRDDDRFLDPMCGAGTILIERAHLGRYRALIGGDIDPEAVATARANIGSRYKPVSIHEWDARRLPLDAGSVTALAVNLPFGAQMGSLEENRTLYPEFLREAARVLRPGARLVALSGDARTLSDALRRNNRLARCATYPVLILGRRAVIVVAERG
>NC_009767.1|WP_083760309.1|3333364_3334753_-|MFS-transporter
MPVSGGGGAGVGDGQRLSDTIHPAAWCRLGSSAILCGIAFVVRWRNCATEQTIVDRHTTNRNLRLLVIELFWASIAIACYSFAAAFLIQLGGSNLMVSLLTSAAALVNALTSIPFAMFLERIGNRRPWIIGSLLALRLGHIGLIFVPFLPAYRAEAMVALLLLINVPVALFNAGWLPMLGDIVPLAQRARLFSARNMTMGITVMTTTFLMGRWLDAAPFPANYQLMFALAVVASLLSTVYVARLTIPPSPVVERTAGRHRPTFVEVRALLRQQRSFANITINTLIFNIAFWMGTPLQPIYFVRELGASDGWLGVWLALISGGQIIGNLVWPRLIEKRGYSWVLLRAATASALYYFLIGAVPDLTLILLFALLFGAVSPGVEISHFNILLEVCPPERRAFSIGVFVTVMNVGFFVATLACAPLIDLVGAQALVLILAGVRLIGALLFVVNPVRAATIEIAKVH
>NC_009767.1|WP_012121084.1|3335020_3337807_+|hypothetical-protein
MILLIHARKAGALALLTLLLAVLVAPALAQSNPTIIDETGNLDVAAVQRAARPLVDRGARVGVFLVQRGGEDDALRQYQRADLASGSNINTDVIAIYVSFDPRYSEIAYGDRWNAALRTNNNVETIRQNQLNPGLASGNATRGVVDALTAIERSIVTPPTPAGGTTVNIDPVPIVGGVIFLVLLAVAGPMLWSGFQKRRAAAKALETARTAMDEARRLASSAIVDLSQALRDAQEKAKFDRVSYAEADVRHLAAMQGDIEQQFARLQERFAETEKSLVLRKMPALADYEAAAQQYRQIAQEANAVRERLVQVEAHRAELDRIAQAAPDEVDRAKKALADVAAQLSDLSADLQPEAVFHSAESLVERAEQLLKERRAADAIAAAGAASAAITALAGAIARMRDIQDGIAAGRAAAERAAEQGFRVDAGMASFNTAEGLLRQAAAALPIIGPEGIAGLLDQADKARELGVIRGGGLPARYRANLERIEKIRADGEALAAFIDEGWRVFDLVDEFAESAWSDIRGNGSEAERAADEAQELWERAAERNSMERQEFIEAGADLDQAEERIAYARALIEAIIKRLKDLEAARDAARDEIAAAEADILQGRAFLAANDPDVGKEPEKLLARAESALAQARAEMQQERPDWLQIVRLAHEANHLADEALRGARSEVEAMDRLREQLKRMQQVATAEVQKIVQFITVHSRDIPVGAKDRINGLQINLQAAYRAAQSVEQKEEAARAEALRDAIERYTALEQQAAQIYADIQNHYQRVATLRQQVRTEADRARSAIMRAEQLSARAGNLVMANARGFALLQEARASYHQIGEVSNETDAQRALERAHDAYSKAESASRIFEEQIASAHRNQDSLGDFIGGVLVGTLLNDRPHRRSSWSGGSRSGGGFGGGGRSGGGFGGGGRSGGGFGGGGRSGGGW
>NC_009767.1|WP_041330765.1|3337956_3338187_-|hypothetical-protein
MSQNDNSNQVYHCPTCGSALVPDNNHLRCTAPGCPERNHSLFLAYGPRLVLREPRTNGHSAVTMPWEMHEGESVSR
>NC_009767.1|WP_012121086.1|3338656_3340474_-|SLC13-family-permease
MTSLFPLSLSEILLVIIATTGLGCIISGRLRPDLAALLVLVTLGVTRVISPQEAFSGFSNSAVITIIGLSVITAALEQTGAVRWVAHHLAGLSGKSETRMIAVFMIAGALLSLVMNNIAAGAILLPAAVRVARQAQIPASKILMPLSFGTLLGGMATLFTTSNIILSGNLIAQGQRGLTMADFLVSGGPMVITGLLYMLFIGRRLLPARETAALTTVGVVDLRSIYQLDQRLWEVRLPPDAQIVGTTLAEANISALTGTTVIAIWRGHTAIFHPTPTEQLRGEDILLVLGREDRVTQLEQFGCIIGRNSTPGHHLNLPIELAEVIVGPRAPFTGQTLQQLRFRTKFGLTVVSLWREGRSYRTNVGTIPLAAGDALLITGPLDRIQQLAEEPGFIVLHTQPAEQLVGRQAVIAGVITLVVLLAATTGWIATGEAMLAGAAALIISGCITMDDAYRAIEWRVITMIAGLLPIGIALTETGLGAKIGTLLTSKLVVYGPMALLTGLFLTTVLMTQLVGGQVTPLIIGPIAISAALNAHVNPQAIAVAVAIGCSTAFLTPIAHPVSLMMGPGNYRSGDFLRVGLGLTVVCLLTLLIVMPLVWRLNSITP
>NC_009767.1|WP_012121087.1|3340497_3340929_-|EamA-family-transporter
MNSYGWLIWALLSAVFAALTTILAKIGIQGVDSDLATLIRTIVIVVVLTGFVWFTGKWTNPFTLGSKTLGFLVLSALATGASWVCYFRALQQGDAAKVAPIDKLSVVLVAIFAVILLAERPSLREWLGIGFVGAGVVIIALAK
>NC_009767.1|WP_012121088.1|3340944_3341463_-|hypothetical-protein
MLLSLHATVYCHTTPCGVVSGVFFDRPSLRLTSILVQEQGLLAAERLVPVLAIDSVTDNTITLTITDDEFTECDPFSEPIEMYHLDPEPSTAIQLPLLRRHARVMASNGRIGRVSALHLDADWRIVAILLHRGYWWGSRDISIPIHLVATIDEFLVTLTVRRDEIASLAAKQ
>NC_009767.1|WP_012121089.1|3341472_3342519_-|AI-2E-family-transporter
MSRFIIRHVAGWIGLLSAVVAAWLIIHYATLLLEVVGILFGATLLSLAIAPIAERLAHWHVPRGITVLAVYILGGIVLIALIELLIPVIRIEAQALRSQGPHLFQQVTTWVSGLPVIGSTVLSMHQSTIPNLGQQLGNFIDSVVRILFGTGGLLLDLLIVTVLSFLFITDPGLPKRLIASWIPPAVQPRLQDFIERLRRRLTRWVWAQILIALYFVVVYSIGLSVLGVPFALTIGIVGGLLEIVPYVGGAFALILAVISSLSVSPWLVVWVIVFHVVVVELESHVIAPALYGRIIGVHPALMLLALFVGAKAGGVVGVFFAVPITVVILACGQELRRSLAISNRTTNS
>NC_009767.1|WP_012121090.1|3342526_3344935_-|glucan-1,4-alpha-glucosidase
MTQTTVRYAPGWPGIPARWTSSAKTGIGTALNPASRVWFTISHGILNEIYYPRIDQACTRDCGLIVTDGHSFFSEEKRHTTSIVTMLAVGVPAYRLVNRCQQHRYQIEKMVITHPMYNAVLQQITFTPLQGSLDQYSVFVLLAPHIGNRGAENTAWIGDYKGLPMLFAERYGLALAVACSAPWTARSVGFVGSSDGWQDLVRNYRLTTLYERAENGNVALTGGIDVMACHGQFTIAIGFGQTWAEAAWHARAGLSDEFDSVCATYIQAWQTWQQTLTALTTIHQQVSAMVLRVHESKQFPGGSIASLSIPWGMAKGDDDLGGYHLVWPRDLVEIGGGLLAIGANDDAWRILNYLALTQEPDGHWPQNMWLDGIPYWNGIQMDETAFPILLLDLAVTTGAIDPATVYRYWPMVRRAASFLVRNGPVTAQDRWEENAGYSPFTLAVEIAALLVTAELAEQYGEPTIADYLRTTADSWNADIDRWCYVTGTDLAHRVGVTGYYVRIAPPDVAEAASPMQGYVPIKNRPPDQANAPLSYIVSPDALALVRFGLRDPHDPRIVNTVQVIDALLKIDTPCGPVWRRYTDDGYGEHQDGAPFDGTGIGRGWPLLTGERAHYELAAERVEAAKRLLITLEAFANEGGFLPEQVWDSTDIPERELFFGRPAGSAMPLAWAHAEHLKLCRSLADQRLFDMPRVTAQRYLSRQVQSKIAIWRPNQKRRRIVAGMTLRIDLNAAAMIHWSADHWQTIHDTTTAASGLGTFFADLPTETLAPATEIVFTLYWIDQQRWEGRDYTVQIEASGISGE
>NC_009767.1|WP_012121091.1|3344931_3346044_-|glucose-1-dehydrogenase
MDALAVQPGSAGIRLVQRPQPEITRPDEVLVRIIRVGICGTDREIVSGGRAKASDHATDLVIGHEMFGRVEAVGSAVQRVHVGDFAVFTVRRGCKQCLPCLMNRPDMCRTGNYRERGIWGLDGYQTELVLDTEAYVVKVPAELEAVGVLLEPLSVAEKAIDEAIRIQQARLPDAPATPNWLFGRRCLVAGIGPIGLLAALALRLRGAEVYGLDIVDASTTRPRWLATIGGHYLDGRTVPPGQIAQIAGMMDLILEATGVPAIEFNLLDALAPDGMYVLTGIPGGDRPLQVAGAELMRRLVLNNQVMVGSVNAARDHFQLAVDDLLQAHYRWGPILNDLISHRYPYTAFPDAFQQHDPHDIKIVLEWEQSQ

Crispr_ID: NC_009767_65

• CRISPR_ID: NC_009767_65
• CRISPR_location: 3353184-3353289
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_65

Consensus_repeat	Method
CCGCAGAGAGAACACGACGTGCGAGAAGTGTTCAAT	CRISPRCasFinder

spacers of NC_009767_65

>65.1|3353220|34|NC_009767|CRISPRCasFinder
TGTTGCAACAGGGGTGAAGTAGAATAGGTGATGA

CRISPR arrays and Neighbor proteins around NC_009767_65

CRISPR arrays

The CRISPR arrays of NC_009767_65

>merge|NC_009767|65|3353184-3353289|CRISPRCasFinder
CCGCAGAGAGAACACGACGTGCGAGAAGTGTTCAATTGTTGCAACAGGGGTGAAGTAGAATAGGTGATGACCGCAGAGAGAACACGACGTGCGAGAAGTGTTCAAT

>NC_009767|65|56|3353184-3353289|CRISPRCasFinder
CCGCAGAGAGAACACGACGTGCGAGAAGTGTTCAAT	TGTTGCAACAGGGGTGAAGTAGAATAGGTGATGA
CCGCAGAGAGAACACGACGTGCGAGAAGTGTTCAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121105.1|3369061_3369868_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_012121092.1|3346062_3347355_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NC_009767.1|WP_012121106.1|3369925_3370192_+|zinc/iron-chelating-domain-containing-protein	unknown	unknown	gnl|CDD|223799
NC_009767.1|WP_012121103.1|3367300_3368134_+|metallophosphoesterase	unknown	unknown	gnl|CDD|163441
NC_009767.1|WP_083760311.1|3355689_3356043_+|tyrosine-type-recombinase/integrase	unknown	unknown	gnl|CDD|131303
NC_009767.1|WP_012121094.1|3348172_3348736_+|peptidase	unknown	unknown	gnl|CDD|377032
NC_009767.1|WP_012121101.1|3357152_3363740_-|alpha-2-macroglobulin	unknown	unknown	gnl|CDD|225248
NC_009767.1|WP_157042646.1|3350263_3350533_-|hypothetical-protein	unknown	unknown	gnl|CDD|377103
NC_009767.1|WP_012121090.1|3342526_3344935_-|glucan-1,4-alpha-glucosidase	unknown	unknown	gnl|CDD|130598
NC_009767.1|WP_012121104.1|3368212_3369013_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_157042647.1|3363775_3364009_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042834.1|3364597_3367132_-|PBP1A-family-penicillin-binding-protein	unknown	unknown	gnl|CDD|273955
NC_009767.1|WP_157042645.1|3349493_3350255_-|flippase-like-domain-containing-protein	unknown	unknown	gnl|CDD|377103
NC_009767.1|WP_012121095.1|3348937_3349462_-|DUF1003-domain-containing-protein	unknown	unknown	gnl|CDD|377629
NC_009767.1|WP_012121091.1|3344931_3346044_-|glucose-1-dehydrogenase	unknown	unknown	gnl|CDD|176192
NC_009767.1|WP_012121093.1|3347555_3347732_-|hypothetical-protein	unknown	unknown	gnl|CDD|197255
NC_009767.1|WP_012121099.1|3352006_3352705_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009767.1|WP_049768836.1|3355369_3355792_+|hypothetical-protein	unknown	unknown	gnl|CDD|131303
NC_009767.1|WP_012121100.1|3356495_3356708_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121098.1|3350610_3352020_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|273593

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121105.1|3369061_3369868_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	1.82785e-91
NC_009767.1|WP_012121092.1|3346062_3347355_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.47985e-30
NC_009767.1|WP_012121106.1|3369925_3370192_+|zinc/iron-chelating-domain-containing-protein	gnl|CDD|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	0.00100421
NC_009767.1|WP_012121103.1|3367300_3368134_+|metallophosphoesterase	gnl|CDD|163441	TIGR03729, acc_ester, putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.	5.24204e-16
NC_009767.1|WP_083760311.1|3355689_3356043_+|tyrosine-type-recombinase/integrase	gnl|CDD|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	3.3808e-34
NC_009767.1|WP_012121094.1|3348172_3348736_+|peptidase	gnl|CDD|377032	pfam03413, PepSY, Peptidase propeptide and YPEB domain. This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase & Bacillus subtilis YPEB.	1.19052e-05
NC_009767.1|WP_012121101.1|3357152_3363740_-|alpha-2-macroglobulin	gnl|CDD|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	7.05374e-146
NC_009767.1|WP_157042646.1|3350263_3350533_-|hypothetical-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	0.00844246
NC_009767.1|WP_012121090.1|3342526_3344935_-|glucan-1,4-alpha-glucosidase	gnl|CDD|130598	TIGR01535, glucan_glucosid, glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NC_009767.1|WP_012121104.1|3368212_3369013_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	9.03792e-94
NC_009767.1|WP_157042834.1|3364597_3367132_-|PBP1A-family-penicillin-binding-protein	gnl|CDD|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NC_009767.1|WP_157042645.1|3349493_3350255_-|flippase-like-domain-containing-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	7.04036e-21
NC_009767.1|WP_012121095.1|3348937_3349462_-|DUF1003-domain-containing-protein	gnl|CDD|377629	pfam06210, DUF1003, Protein of unknown function (DUF1003). This family consists of several hypothetical bacterial proteins of unknown function.	1.27941e-25
NC_009767.1|WP_012121091.1|3344931_3346044_-|glucose-1-dehydrogenase	gnl|CDD|176192	cd08230, glucose_DH, Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	1.33696e-167
NC_009767.1|WP_012121093.1|3347555_3347732_-|hypothetical-protein	gnl|CDD|197255	cd09158, PLDc_EcCLS_like_2, Catalytic domain, repeat 2, of Escherichia coli cardiolipin synthase and similar proteins. Catalytic domain, repeat 2, of Escherichia coli cardiolipin (CL) synthase and similar proteins. Escherichia coli CL synthase (EcCLS), specified by the cls gene, is the prototype of this family. EcCLS is a multi-pass membrane protein that catalyzes reversible phosphatidyl group transfer between two phosphatidylglycerol molecules to form cardiolipin (CL) and glycerol. The monomer of EcCLS consists of two catalytic domains. Each catalytic domain contains one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) that characterizes the phospholipase D (PLD) superfamily. Two HKD motifs from two domains form a single active site involved in phosphatidyl group transfer. EcCLS can be stimulated by phosphate and inhibited by CL, the product of the reaction, and by phosphatidate. Phosphate stimulation may be unique to enzymes with CL synthase activity belonging to the PLD superfamily. Like other PLD enzymes, EcCLS utilizes a common two-step ping-pong catalytic mechanism involving an enzyme-substrate intermediate to cleave phosphodiester bonds. The two histidine residues from the two HKD motifs play key roles in the catalysis. Upon substrate binding, a histidine residue from one HKD motif could function as the nucleophile, attacking the phosphodiester bond to create a covalent phosphohistidine intermediate, while the other histidine residue from the second HKD motif could serve as a general acid, stabilizing the leaving group.	0.000113126
NC_009767.1|WP_012121099.1|3352006_3352705_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.19923e-92
NC_009767.1|WP_049768836.1|3355369_3355792_+|hypothetical-protein	gnl|CDD|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	7.06403e-20
NC_009767.1|WP_012121098.1|3350610_3352020_-|HAMP-domain-containing-protein	gnl|CDD|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	1.69536e-68

Protein sequences

>NC_009767.1|WP_012121099.1|3352006_3352705_-|response-regulator-transcription-factor
MRVLIVEDERAIAGYIKRGLEEQGYAVDVAYDGREALDWLDAAPFDLVILDLMLPQIDGLTVCRELRARGFRMPVLMLTARDSIDDRVRGLDSGADDYLVKPFAIQELLARLRALARRSTDAPKTPVLHIADLMLDTATRRVSRGGKYIELTAKEYAILECLMRASGRLLTRTMIAEHVWNYDTFNQSNVIDVYIRNLRRKIDDPFPVKLIQTVRGAGYRLWYEAEHEHDPT
>NC_009767.1|WP_012121098.1|3350610_3352020_-|HAMP-domain-containing-protein
MIQRSTTLRVRFAIWTGGLLCVTLLLFSGFVYWQTAQGLSESLDTGLQASALQITASLSGEQVNIEDGQITLDEHLSDPTLLAQLQTQGLTIRVLDRTGAIRQAVGAYQHAPVDPVSLRARSGTPVWHTQILPDRTAVRVYTVPVYEHSQSVGLIQIIQSLEPVVETLQQLQTAFVIGIPALTVLTGLASYWLAAQALQPITNIIRTAQQISATDLHARITLPPTDDEVGRLAATFNSMLARLEDAFRRERQFTADASHELRTPVAAMEAIITVTRERPRSVTEYTQALDDLLVQTRRLRSLIDDLLQLTRSETRYRSTHTPVNLSLLLEDVTETMRPLAEERGLVIVTEISPNLVVVGDSDSLIRLWLNVLDNAIKYTPRGTITLRAFRTGDQVTVTVTDSGIGIAPEHLPFIFERFYRVDPARSGNGNGLGLAIAREIVRLHHGTITVTSELGHGTTFTVNLPTDLG
>NC_009767.1|WP_157042646.1|3350263_3350533_-|hypothetical-protein
MAEPFVNVYHEVRQNWIQYVVGVCGLGIVLGLALRSVDLQELHQVLATANQWWLTAAVICKVLTPLGTAIVYAGILQMLGHRIRAISSG
>NC_009767.1|WP_157042645.1|3349493_3350255_-|flippase-like-domain-containing-protein
MTVVINMAFPAGPVAMSAFLLHVFRHRGVPEGITTIAVALDALTYETAFFGLVGFGLAYLLTHRDFSVSQITEVGIIALIVVVAGMYLWGLQRDRADFTRKAIAVQQWLTRHLHRQWRTNQVEQFLDEVYRGKALVAHRPKAFSRLSGIQIAVLCLDILTLYCIFRAVGSDPHLSVVILSYSLASLFAALAPLPGGGGSFESTLVLVASRLGISPTVSLSATLIYRILTFWLPSLLTVAMYRLVKPKSSLSHR
>NC_009767.1|WP_012121095.1|3348937_3349462_-|DUF1003-domain-containing-protein
MHIHLPQLPHTLRELRRQRQPIRDVNREHREQIGRLDRLALFITERVGTMGFFLVIFIWTVLWLGWNILAPKPLQFDPPMAFVFWLFISNMIQILLMPLLMVGQNLQGRHAELRAQSDYEINLRAEREIDAILQHLEYQNALLHTLLIKVGIPTDQLPPIPAFTAQTTNETEQS
>NC_009767.1|WP_012121094.1|3348172_3348736_+|peptidase
MKRWIRIFAPMVALALVVVAAIAALGNTNVQARRADPVSAVVVAQAQPQAPTVTVEPDEGSETPDAQEGPETPDAQEGPETPDAQEGPETPDADESAEAAALASKVAISEQQAVATALAANPGATMVKVSLDNENGVIVYSVALDNGADVKVDAITGQITSVDQAGAEEEGNDVEHVDETPTISVQP
>NC_009767.1|WP_012121093.1|3347555_3347732_-|hypothetical-protein
MIGVSNLDVHLYTLDMEISLIIYEPATVTALYWIVADYVARLQPAELHYGCGNRSSKP
>NC_009767.1|WP_012121092.1|3346062_3347355_-|MFS-transporter
MSEQSSFESTSHQSSTSPSWRAWIEPWYAVYTLLGAVSAGLLPILIPLFVHQQGTAAEVGLVMAALNASGLLAPLWSWLADRYRWHRQIIAGGMALTAIGTTIFMFVTNAVLWAVIALLLNLGAIAAATIANLLIIERFPRTEWDERLGWLQTAYGGGQVFGLLITAFLGQANLRIGFGITALCCFIGMGIAWRFVRTPSAARPTIPLLRHHPKHTDGMFSSPYQLLHHLNPTLICNRNGILTTPLSVWLGVWLLAASGAGAFFALYPIVMQQVFSIAPSVAAGGFAVAAALGLLLYAPAGDLMHRIGPLAVVRYALIVRAGACALLWLIGNVSVGFVPVITIFIIIVLSWSFISVSATDLTALLSPVEGGESIGLFNAISALANIIGASLGGWIAVQFGYPAVIAWAALGVACGAAGTYILRPPPQAAS
>NC_009767.1|WP_012121091.1|3344931_3346044_-|glucose-1-dehydrogenase
MDALAVQPGSAGIRLVQRPQPEITRPDEVLVRIIRVGICGTDREIVSGGRAKASDHATDLVIGHEMFGRVEAVGSAVQRVHVGDFAVFTVRRGCKQCLPCLMNRPDMCRTGNYRERGIWGLDGYQTELVLDTEAYVVKVPAELEAVGVLLEPLSVAEKAIDEAIRIQQARLPDAPATPNWLFGRRCLVAGIGPIGLLAALALRLRGAEVYGLDIVDASTTRPRWLATIGGHYLDGRTVPPGQIAQIAGMMDLILEATGVPAIEFNLLDALAPDGMYVLTGIPGGDRPLQVAGAELMRRLVLNNQVMVGSVNAARDHFQLAVDDLLQAHYRWGPILNDLISHRYPYTAFPDAFQQHDPHDIKIVLEWEQSQ
>NC_009767.1|WP_012121090.1|3342526_3344935_-|glucan-1,4-alpha-glucosidase
MTQTTVRYAPGWPGIPARWTSSAKTGIGTALNPASRVWFTISHGILNEIYYPRIDQACTRDCGLIVTDGHSFFSEEKRHTTSIVTMLAVGVPAYRLVNRCQQHRYQIEKMVITHPMYNAVLQQITFTPLQGSLDQYSVFVLLAPHIGNRGAENTAWIGDYKGLPMLFAERYGLALAVACSAPWTARSVGFVGSSDGWQDLVRNYRLTTLYERAENGNVALTGGIDVMACHGQFTIAIGFGQTWAEAAWHARAGLSDEFDSVCATYIQAWQTWQQTLTALTTIHQQVSAMVLRVHESKQFPGGSIASLSIPWGMAKGDDDLGGYHLVWPRDLVEIGGGLLAIGANDDAWRILNYLALTQEPDGHWPQNMWLDGIPYWNGIQMDETAFPILLLDLAVTTGAIDPATVYRYWPMVRRAASFLVRNGPVTAQDRWEENAGYSPFTLAVEIAALLVTAELAEQYGEPTIADYLRTTADSWNADIDRWCYVTGTDLAHRVGVTGYYVRIAPPDVAEAASPMQGYVPIKNRPPDQANAPLSYIVSPDALALVRFGLRDPHDPRIVNTVQVIDALLKIDTPCGPVWRRYTDDGYGEHQDGAPFDGTGIGRGWPLLTGERAHYELAAERVEAAKRLLITLEAFANEGGFLPEQVWDSTDIPERELFFGRPAGSAMPLAWAHAEHLKLCRSLADQRLFDMPRVTAQRYLSRQVQSKIAIWRPNQKRRRIVAGMTLRIDLNAAAMIHWSADHWQTIHDTTTAASGLGTFFADLPTETLAPATEIVFTLYWIDQQRWEGRDYTVQIEASGISGE
>NC_009767.1|WP_049768836.1|3355369_3355792_+|hypothetical-protein
MSSSGHPLRLLDQVRGALRRKPSSLRTAAASIGWVRRFIRVHHLRHPRAMGSRDIGAFLTCLAVEAEVAASTQNQALSAVFVRDCEAVQIARDADLSIMPMTCDHPAWSPQAARGVVRDPRRFRAALGRTRMRHLHSSLV
>NC_009767.1|WP_083760311.1|3355689_3356043_+|tyrosine-type-recombinase/integrase
MVAPSSARGRARPAPIPRCARKDTNAASSLVIGMMRHHQDESGLQKAVRRAAQQAGVQKRVTCHTFRHRFATHVREAGDDMRTVQELRDHKDGQTTMIDTHVLRRGLGAVCSPLDDA
>NC_009767.1|WP_012121100.1|3356495_3356708_-|hypothetical-protein
MTINDDYIRHTFTILFDVPADAAANHEMTRDVLNAAVSRITELIETDARLQALLQQYGIEYGWEEESWER
>NC_009767.1|WP_012121101.1|3357152_3363740_-|alpha-2-macroglobulin
MKQNPQFPLRAIIAAGIGVILIIAAVLAGPLLLSAPQVVRIEPPDGAEMVNPQAPLRIEFSQPVQKDSLAAVLRIEPSVDLTIDMEGNSALVRPTGGLQYGAEYTLTVGAGVRNALGRATESAQTVRFRTAPYVTVREVFPADGSADVPLETLIMVEFNAPVVSAEAIAAAADDPRRADELPQPLTLTAGSDPKPVNGVGRWLSPTRFGFSPEDGLRLATTYRVTLRADLTPDGAARMEQPVNWSFTTAAQLLIGTRPFDGEIDVAADRPIEIRLHRDIDPASVGASFRLLDAGGAAVAGTVETFEGGVRFKPAAPLQRGVRYRAMLEPGVNTRTGAILNAKPFEWTFVVIGDLEVQQVEPAGDTRDVPVDIKRISVRFNHPVVPVVDVAGSGGLPVAATIEPPVQGVARWIDTSTFVFSPTVPLDSSTDYRVRVAAGLTDQTGGVLRNEYVWSFRTIDPAVNDVQPTSAYAAPTTPVTVTFNQAMDLASLRSALRVIRADNGAQVAGTIAVSGTSAIFRSDAPLERGVDYRVVIDAGARSARGNGVLDQPFSSSFRVAPLPALVMTDPAPGATFSPSAGGIRLIFSTPMDWDTVGRALVIEPKLTDVFTSSYETDFYIYSQFEPETEYRITVGAAARDLYGMALGQDATVTFRTGPREPFVGLIGAYRAGFYRAVNNVRVPLQWVNVPDVEWRIARLTPEAAALLISSYEDWESFSPSVSDLVSQGTQPLGGERNRGRVGFVEVGPLAPGVYYLELRAFGNLVDRQVMVVSPYALTVKRSADRLFVWAVDLATGQPVPGLEVRAATYRYDRAASIDTPVNLGRTGADGVLVAPFDGRGYGAIFLWSSESGRTVTFTTSDWESGISPWNFGLMADYGSRTLAGSLLTDKPIYRPGQTVHVRGALRGIAVGTGQGQVERYVLPGVGDRAYVEVNDPEGSAIFSTTLTFSPFGTFTTDLPLAQGAPLGSYSMVARLGGPQGYLSDAPVVFGSFLVAEYRVPAFEVTLTPSTSDLLRGDPLNVAVQAAYFAGGAPSNAPVRWRLLSQPFYFSSDNAPNFSFFDTDDAYAWYAFRQDFMFGDLIADGEGTTDAQGRFTLTLPASVYDRQPTGNGLRTGSQVLMLDVEVTDVDGQVIASQATVTVHGGAFYIGLRPEGYVARAGQPQQVSIVTLTPQGDPAPNRAVDVEIYQREWYSVREQGADGRFYWTSAYTDTLVETRTTRTDAQGRGQVQFTPMKGGLYRLVGKGKDDAGRTVQTGAYTWAEGGNVFWGINDSNRVDLIADKRLYKPGDTATILVTAPYPDMTALLTIERGSVIEYRTFTLQGTTGVLQVPIRDEYAPNVYAALTLIKAAGDGSNPDAPAAPDLRVGIVKLPVSTERQELTITLTPDKTQVGPRDTVTYMLKATDYTGKGVRAEVSLALVDKAVLTLTNDPNPSLRQAFYDQRALGVFTSSPLTVLVDRVTLRLQPGDKGGGGGLEAPLDVRRNFPDTAFWNPALVTADDGTAQFSVTLPDNLTTWRLTARAITADTLVGEQTVDIVASKPLLLRPTLPRALTVGDRPVLQAVVQNTTNAAIEATVQVTPNPALTVEGPLEQRVNVPANSTALVRWQASVNPPPGDADEAILTLRASGGGYDDAVEARVPLRFLTTAEATASAGQVLDQVVETVQLPPEKAAADARVELELTPSLVAGITRGVEQLARSPYLSSEATVSSFMPAAAAYRLLQQAGFDDPQLRATLERSLTVGVQRLSVLQKIDGGWGWWNADESDPYLTAYAVQGLVEAQRAGFTVDPAILDRAMVFLTEALDAAPSLRSPLSDPNTRAYVLFVLGEAGKPDRGRAVNLYNERSALNVAGKAHLLMTLQAAGSEESRIRTLIAELMGSAVLTTSDAHWEVGGMSLWALDSDVTATGLALRSLLRTDPQNFLIPGAARWLMGERERDIWRTTYDSAGAVLALAEYAAQTGDLQADYRYRVALDGRTIREAVVSPATLRETDRVTIAGADLKPEGSQVLLQRQAAADQSGKGRLYYTLRVRYREDAAGAQALDRGFGVQREYIAVASDTLSPTGQLITQARQGDLVQVRITLSIPTDVRYLTVEDFLPGGLEALDTSLKTTTAAVRDAELMPEGEEQPYWWHFGHTEVRAGRVALFATDLPKGTYTYTYLARATVPGIYAAPPATAYRAYAPEEFGRSAGASFTVVAP
>NC_009767.1|WP_157042647.1|3363775_3364009_+|hypothetical-protein
MWCRPWRTGGVHGRATGVRSWARHRRSFMGAPPAFVHGRATGVRSWARHGRSFMGAPEARHGRSFTGAPRAFVHGRA
>NC_009767.1|WP_157042834.1|3364597_3367132_-|PBP1A-family-penicillin-binding-protein
MGRFFRETLRAAGAGVVVLALLCIWLWVSTDLPSPERLRARAALGATRVLDRHGRLLYSVPDPMGAQRRPIPLSQMSPALIQATIAAEDASFYDNPGIDLRGIARAIWLNLRKGQIVAGGSTITQQLARSFLIDPTLAQERSLERKAREIVLALKLTAVLSKDEILELYLNQTYYGAMSYGVEAASQRFFGKSARDLDLAEAALLAGLPQAPSRYDPFASPDAARARQRDVLAAMVRTGFITPTEAESAADEPLHFRSNCVTPGCLPRAPHFVFFVLEQLAAELGPDAVARGGLTITTTLDLGLQEAAELALRRHLEALTNPRDGSPDRRARNGAVVVLNPRDGAILAMVGSPDFTNDAIQGQVNAALALRQPGSAIKPLTYAAALERGWTPATTILDIPTAFTDAHGRVYAPQNYDRAFHGPLSLREALATSSNVAAVRTLDFIGIPALLEMASRLGIRSLGDEPGRFGLALTLGGGEVTLLELTGAYAAFANGGMRVTPYAIRDISSASLPDTSTPRTREAPLPALDPQIAYLISDMLSDRYARMRAFGGALDIDRPAAVKTGTTTDWRDNWTIGYTPDRAVGVWIGNADGRRMEAVSGVTGAAPVWRQVMLAAHQGLPPRSFVPPPGIVEVTICAEGGLLPSPVCPATRLERFAAGTAPQRPDDTHVMVRVDPARECRAPDDYPQTRTMLRIYRLLPPEAEPWAVSAGVPRPPRAVCPLLPDSARERRDAAHPAGNAQTGEETNVSTWQSIPLVITSPAHGAVFALSPGVSIEHQRIAITAGAIRDIEEVTVFVDSEPVAVAPRAFWQLQPGIHRVWAEGRDASGRIVRSPVVEFEVRSAP
>NC_009767.1|WP_012121103.1|3367300_3368134_+|metallophosphoesterase
MHIYYLNKDVQTMRIIVTADLHYRPAKRDSYLAFAEWVRQRNPDCFIIAGDIGHPLRLFRRGLQLFRDLTCTRAVIAGNHDVYRSDHDSRSLWESWLPQIAREEGFIWLENDVLTLGTLGICGTMAWYDYSSRAPHLALGDHEYRVLKGSVNHDADYIDWPWSDRAMARYLAKGFANRLETLIGNPDVSQILVVTHVPIIEAAVPRDPENDFWSLMSAYLGNLTLGKFVLDQPKVSHIVSGHLHRAGRWTISGRHGPVECHVVGSRPGEPTAVELNF
>NC_009767.1|WP_012121104.1|3368212_3369013_-|DUF4058-family-protein
MHSPFPGMDPFLEAPDLWPDVHTRLIVGISDVLAEKLSPRFIVAIEQRLIVAEDDSPLALGAIIPDLAVVTPARPGVTAPLDANYTAPTLIEPLPEPEVRERFIEIRDARTRRVVTIIELLSPANKTPGTPSAIAFERKRSVVFESRTHWIEIDLLRAGTRFEATAGKSDYCVLLKRGTDYRYAAWFIDLRDPLPTILAPTTADFGDVTLNLQQVFETAYARAHYADAVDYTRPVPPPPLPPADAAWVREQVRRWLDARQQPRDAG
>NC_009767.1|WP_012121105.1|3369061_3369868_-|DUF4058-family-protein
MRSPFPGMDPFLEAPDLWPDVHTELISGMRSILAEKLSPRFIVAIEQRLIVAEDDSPLALGAIIPDLAVVTPARPGVTAPLDANYTAPTLIEPLPEPEVRERFIEIRDARTRRVVTIIELLSPANKTPGTPSAIAFERKRSVVFESRTHWIEIDLLRAGTRFEATAGKSDYCVLLKRGTDYRYAAWFIDLRDPLPTILAPTTADFGDVTLNLQQVFETAYARAHYADAVDYTRPVPPPPLPPADAAWVREQVRRWLDARQQPRDAGES
>NC_009767.1|WP_012121106.1|3369925_3370192_+|zinc/iron-chelating-domain-containing-protein
MQLIECRAGCGACCIAPSISSPIPGMPRGKPAGMRCIQLSADNRCMLFGNPERPAVCASLQPTVEMCGTTNEEAFIILTILERMTSPE

Crispr_ID: NC_009767_66

• CRISPR_ID: NC_009767_66
• CRISPR_location: 3356678-3356788
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_66

Consensus_repeat	Method
TATGGCGGATGTAATCATCGTTGATGGTCATTGTAA	CRISPRCasFinder

spacers of NC_009767_66

>66.1|3356714|39|NC_009767|CRISPRCasFinder
CGCCCCGCATTCATCATTCATCATTCCGCATTCATCATT

CRISPR arrays and Neighbor proteins around NC_009767_66

CRISPR arrays

The CRISPR arrays of NC_009767_66

>merge|NC_009767|66|3356678-3356788|CRISPRCasFinder
TATGGCGGATGTAATCATCGTTGATGGTCATTGTAACGCCCCGCATTCATCATTCATCATTCCGCATTCATCATTTATGGCGGATGTAATCGTCGTTGATGGTCATTGTAA

>NC_009767|66|57|3356678-3356788|CRISPRCasFinder
TATGGCGGATGTAATCATCGTTGATGGTCATTGTAA	CGCCCCGCATTCATCATTCATCATTCCGCATTCATCATT
TATGGCGGATGTAATCGTCGTTGATGGTCATTGTAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121109.1|3372018_3372312_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121105.1|3369061_3369868_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_012121092.1|3346062_3347355_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NC_009767.1|WP_012121106.1|3369925_3370192_+|zinc/iron-chelating-domain-containing-protein	unknown	unknown	gnl|CDD|223799
NC_009767.1|WP_012121103.1|3367300_3368134_+|metallophosphoesterase	unknown	unknown	gnl|CDD|163441
NC_009767.1|WP_012121107.1|3370207_3370639_+|hypothetical-protein	unknown	unknown	gnl|CDD|276809
NC_009767.1|WP_083760311.1|3355689_3356043_+|tyrosine-type-recombinase/integrase	unknown	unknown	gnl|CDD|131303
NC_009767.1|WP_012121094.1|3348172_3348736_+|peptidase	unknown	unknown	gnl|CDD|377032
NC_009767.1|WP_012121095.1|3348937_3349462_-|DUF1003-domain-containing-protein	unknown	unknown	gnl|CDD|377629
NC_009767.1|WP_157042646.1|3350263_3350533_-|hypothetical-protein	unknown	unknown	gnl|CDD|377103
NC_009767.1|WP_157042647.1|3363775_3364009_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042834.1|3364597_3367132_-|PBP1A-family-penicillin-binding-protein	unknown	unknown	gnl|CDD|273955
NC_009767.1|WP_012121108.1|3370640_3371843_+|MFS-transporter	unknown	unknown	gnl|CDD|340883
NC_009767.1|WP_012121098.1|3350610_3352020_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|273593
NC_009767.1|WP_012121101.1|3357152_3363740_-|alpha-2-macroglobulin	unknown	unknown	gnl|CDD|225248
NC_009767.1|WP_012121104.1|3368212_3369013_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_012121093.1|3347555_3347732_-|hypothetical-protein	unknown	unknown	gnl|CDD|197255
NC_009767.1|WP_012121099.1|3352006_3352705_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009767.1|WP_049768836.1|3355369_3355792_+|hypothetical-protein	unknown	unknown	gnl|CDD|131303
NC_009767.1|WP_157042645.1|3349493_3350255_-|flippase-like-domain-containing-protein	unknown	unknown	gnl|CDD|377103

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121105.1|3369061_3369868_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	1.82785e-91
NC_009767.1|WP_012121092.1|3346062_3347355_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.47985e-30
NC_009767.1|WP_012121106.1|3369925_3370192_+|zinc/iron-chelating-domain-containing-protein	gnl|CDD|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	0.00100421
NC_009767.1|WP_012121103.1|3367300_3368134_+|metallophosphoesterase	gnl|CDD|163441	TIGR03729, acc_ester, putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.	5.24204e-16
NC_009767.1|WP_012121107.1|3370207_3370639_+|hypothetical-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.66716e-09
NC_009767.1|WP_083760311.1|3355689_3356043_+|tyrosine-type-recombinase/integrase	gnl|CDD|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	3.3808e-34
NC_009767.1|WP_012121094.1|3348172_3348736_+|peptidase	gnl|CDD|377032	pfam03413, PepSY, Peptidase propeptide and YPEB domain. This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase & Bacillus subtilis YPEB.	1.19052e-05
NC_009767.1|WP_012121095.1|3348937_3349462_-|DUF1003-domain-containing-protein	gnl|CDD|377629	pfam06210, DUF1003, Protein of unknown function (DUF1003). This family consists of several hypothetical bacterial proteins of unknown function.	1.27941e-25
NC_009767.1|WP_157042646.1|3350263_3350533_-|hypothetical-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	0.00844246
NC_009767.1|WP_157042834.1|3364597_3367132_-|PBP1A-family-penicillin-binding-protein	gnl|CDD|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NC_009767.1|WP_012121108.1|3370640_3371843_+|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.01627e-26
NC_009767.1|WP_012121098.1|3350610_3352020_-|HAMP-domain-containing-protein	gnl|CDD|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	1.69536e-68
NC_009767.1|WP_012121101.1|3357152_3363740_-|alpha-2-macroglobulin	gnl|CDD|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	7.05374e-146
NC_009767.1|WP_012121104.1|3368212_3369013_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	9.03792e-94
NC_009767.1|WP_012121093.1|3347555_3347732_-|hypothetical-protein	gnl|CDD|197255	cd09158, PLDc_EcCLS_like_2, Catalytic domain, repeat 2, of Escherichia coli cardiolipin synthase and similar proteins. Catalytic domain, repeat 2, of Escherichia coli cardiolipin (CL) synthase and similar proteins. Escherichia coli CL synthase (EcCLS), specified by the cls gene, is the prototype of this family. EcCLS is a multi-pass membrane protein that catalyzes reversible phosphatidyl group transfer between two phosphatidylglycerol molecules to form cardiolipin (CL) and glycerol. The monomer of EcCLS consists of two catalytic domains. Each catalytic domain contains one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) that characterizes the phospholipase D (PLD) superfamily. Two HKD motifs from two domains form a single active site involved in phosphatidyl group transfer. EcCLS can be stimulated by phosphate and inhibited by CL, the product of the reaction, and by phosphatidate. Phosphate stimulation may be unique to enzymes with CL synthase activity belonging to the PLD superfamily. Like other PLD enzymes, EcCLS utilizes a common two-step ping-pong catalytic mechanism involving an enzyme-substrate intermediate to cleave phosphodiester bonds. The two histidine residues from the two HKD motifs play key roles in the catalysis. Upon substrate binding, a histidine residue from one HKD motif could function as the nucleophile, attacking the phosphodiester bond to create a covalent phosphohistidine intermediate, while the other histidine residue from the second HKD motif could serve as a general acid, stabilizing the leaving group.	0.000113126
NC_009767.1|WP_012121099.1|3352006_3352705_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.19923e-92
NC_009767.1|WP_049768836.1|3355369_3355792_+|hypothetical-protein	gnl|CDD|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	7.06403e-20
NC_009767.1|WP_157042645.1|3349493_3350255_-|flippase-like-domain-containing-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	7.04036e-21

Protein sequences

>NC_009767.1|WP_083760311.1|3355689_3356043_+|tyrosine-type-recombinase/integrase
MVAPSSARGRARPAPIPRCARKDTNAASSLVIGMMRHHQDESGLQKAVRRAAQQAGVQKRVTCHTFRHRFATHVREAGDDMRTVQELRDHKDGQTTMIDTHVLRRGLGAVCSPLDDA
>NC_009767.1|WP_049768836.1|3355369_3355792_+|hypothetical-protein
MSSSGHPLRLLDQVRGALRRKPSSLRTAAASIGWVRRFIRVHHLRHPRAMGSRDIGAFLTCLAVEAEVAASTQNQALSAVFVRDCEAVQIARDADLSIMPMTCDHPAWSPQAARGVVRDPRRFRAALGRTRMRHLHSSLV
>NC_009767.1|WP_012121099.1|3352006_3352705_-|response-regulator-transcription-factor
MRVLIVEDERAIAGYIKRGLEEQGYAVDVAYDGREALDWLDAAPFDLVILDLMLPQIDGLTVCRELRARGFRMPVLMLTARDSIDDRVRGLDSGADDYLVKPFAIQELLARLRALARRSTDAPKTPVLHIADLMLDTATRRVSRGGKYIELTAKEYAILECLMRASGRLLTRTMIAEHVWNYDTFNQSNVIDVYIRNLRRKIDDPFPVKLIQTVRGAGYRLWYEAEHEHDPT
>NC_009767.1|WP_012121098.1|3350610_3352020_-|HAMP-domain-containing-protein
MIQRSTTLRVRFAIWTGGLLCVTLLLFSGFVYWQTAQGLSESLDTGLQASALQITASLSGEQVNIEDGQITLDEHLSDPTLLAQLQTQGLTIRVLDRTGAIRQAVGAYQHAPVDPVSLRARSGTPVWHTQILPDRTAVRVYTVPVYEHSQSVGLIQIIQSLEPVVETLQQLQTAFVIGIPALTVLTGLASYWLAAQALQPITNIIRTAQQISATDLHARITLPPTDDEVGRLAATFNSMLARLEDAFRRERQFTADASHELRTPVAAMEAIITVTRERPRSVTEYTQALDDLLVQTRRLRSLIDDLLQLTRSETRYRSTHTPVNLSLLLEDVTETMRPLAEERGLVIVTEISPNLVVVGDSDSLIRLWLNVLDNAIKYTPRGTITLRAFRTGDQVTVTVTDSGIGIAPEHLPFIFERFYRVDPARSGNGNGLGLAIAREIVRLHHGTITVTSELGHGTTFTVNLPTDLG
>NC_009767.1|WP_157042646.1|3350263_3350533_-|hypothetical-protein
MAEPFVNVYHEVRQNWIQYVVGVCGLGIVLGLALRSVDLQELHQVLATANQWWLTAAVICKVLTPLGTAIVYAGILQMLGHRIRAISSG
>NC_009767.1|WP_157042645.1|3349493_3350255_-|flippase-like-domain-containing-protein
MTVVINMAFPAGPVAMSAFLLHVFRHRGVPEGITTIAVALDALTYETAFFGLVGFGLAYLLTHRDFSVSQITEVGIIALIVVVAGMYLWGLQRDRADFTRKAIAVQQWLTRHLHRQWRTNQVEQFLDEVYRGKALVAHRPKAFSRLSGIQIAVLCLDILTLYCIFRAVGSDPHLSVVILSYSLASLFAALAPLPGGGGSFESTLVLVASRLGISPTVSLSATLIYRILTFWLPSLLTVAMYRLVKPKSSLSHR
>NC_009767.1|WP_012121095.1|3348937_3349462_-|DUF1003-domain-containing-protein
MHIHLPQLPHTLRELRRQRQPIRDVNREHREQIGRLDRLALFITERVGTMGFFLVIFIWTVLWLGWNILAPKPLQFDPPMAFVFWLFISNMIQILLMPLLMVGQNLQGRHAELRAQSDYEINLRAEREIDAILQHLEYQNALLHTLLIKVGIPTDQLPPIPAFTAQTTNETEQS
>NC_009767.1|WP_012121094.1|3348172_3348736_+|peptidase
MKRWIRIFAPMVALALVVVAAIAALGNTNVQARRADPVSAVVVAQAQPQAPTVTVEPDEGSETPDAQEGPETPDAQEGPETPDAQEGPETPDADESAEAAALASKVAISEQQAVATALAANPGATMVKVSLDNENGVIVYSVALDNGADVKVDAITGQITSVDQAGAEEEGNDVEHVDETPTISVQP
>NC_009767.1|WP_012121093.1|3347555_3347732_-|hypothetical-protein
MIGVSNLDVHLYTLDMEISLIIYEPATVTALYWIVADYVARLQPAELHYGCGNRSSKP
>NC_009767.1|WP_012121092.1|3346062_3347355_-|MFS-transporter
MSEQSSFESTSHQSSTSPSWRAWIEPWYAVYTLLGAVSAGLLPILIPLFVHQQGTAAEVGLVMAALNASGLLAPLWSWLADRYRWHRQIIAGGMALTAIGTTIFMFVTNAVLWAVIALLLNLGAIAAATIANLLIIERFPRTEWDERLGWLQTAYGGGQVFGLLITAFLGQANLRIGFGITALCCFIGMGIAWRFVRTPSAARPTIPLLRHHPKHTDGMFSSPYQLLHHLNPTLICNRNGILTTPLSVWLGVWLLAASGAGAFFALYPIVMQQVFSIAPSVAAGGFAVAAALGLLLYAPAGDLMHRIGPLAVVRYALIVRAGACALLWLIGNVSVGFVPVITIFIIIVLSWSFISVSATDLTALLSPVEGGESIGLFNAISALANIIGASLGGWIAVQFGYPAVIAWAALGVACGAAGTYILRPPPQAAS
>NC_009767.1|WP_012121101.1|3357152_3363740_-|alpha-2-macroglobulin
MKQNPQFPLRAIIAAGIGVILIIAAVLAGPLLLSAPQVVRIEPPDGAEMVNPQAPLRIEFSQPVQKDSLAAVLRIEPSVDLTIDMEGNSALVRPTGGLQYGAEYTLTVGAGVRNALGRATESAQTVRFRTAPYVTVREVFPADGSADVPLETLIMVEFNAPVVSAEAIAAAADDPRRADELPQPLTLTAGSDPKPVNGVGRWLSPTRFGFSPEDGLRLATTYRVTLRADLTPDGAARMEQPVNWSFTTAAQLLIGTRPFDGEIDVAADRPIEIRLHRDIDPASVGASFRLLDAGGAAVAGTVETFEGGVRFKPAAPLQRGVRYRAMLEPGVNTRTGAILNAKPFEWTFVVIGDLEVQQVEPAGDTRDVPVDIKRISVRFNHPVVPVVDVAGSGGLPVAATIEPPVQGVARWIDTSTFVFSPTVPLDSSTDYRVRVAAGLTDQTGGVLRNEYVWSFRTIDPAVNDVQPTSAYAAPTTPVTVTFNQAMDLASLRSALRVIRADNGAQVAGTIAVSGTSAIFRSDAPLERGVDYRVVIDAGARSARGNGVLDQPFSSSFRVAPLPALVMTDPAPGATFSPSAGGIRLIFSTPMDWDTVGRALVIEPKLTDVFTSSYETDFYIYSQFEPETEYRITVGAAARDLYGMALGQDATVTFRTGPREPFVGLIGAYRAGFYRAVNNVRVPLQWVNVPDVEWRIARLTPEAAALLISSYEDWESFSPSVSDLVSQGTQPLGGERNRGRVGFVEVGPLAPGVYYLELRAFGNLVDRQVMVVSPYALTVKRSADRLFVWAVDLATGQPVPGLEVRAATYRYDRAASIDTPVNLGRTGADGVLVAPFDGRGYGAIFLWSSESGRTVTFTTSDWESGISPWNFGLMADYGSRTLAGSLLTDKPIYRPGQTVHVRGALRGIAVGTGQGQVERYVLPGVGDRAYVEVNDPEGSAIFSTTLTFSPFGTFTTDLPLAQGAPLGSYSMVARLGGPQGYLSDAPVVFGSFLVAEYRVPAFEVTLTPSTSDLLRGDPLNVAVQAAYFAGGAPSNAPVRWRLLSQPFYFSSDNAPNFSFFDTDDAYAWYAFRQDFMFGDLIADGEGTTDAQGRFTLTLPASVYDRQPTGNGLRTGSQVLMLDVEVTDVDGQVIASQATVTVHGGAFYIGLRPEGYVARAGQPQQVSIVTLTPQGDPAPNRAVDVEIYQREWYSVREQGADGRFYWTSAYTDTLVETRTTRTDAQGRGQVQFTPMKGGLYRLVGKGKDDAGRTVQTGAYTWAEGGNVFWGINDSNRVDLIADKRLYKPGDTATILVTAPYPDMTALLTIERGSVIEYRTFTLQGTTGVLQVPIRDEYAPNVYAALTLIKAAGDGSNPDAPAAPDLRVGIVKLPVSTERQELTITLTPDKTQVGPRDTVTYMLKATDYTGKGVRAEVSLALVDKAVLTLTNDPNPSLRQAFYDQRALGVFTSSPLTVLVDRVTLRLQPGDKGGGGGLEAPLDVRRNFPDTAFWNPALVTADDGTAQFSVTLPDNLTTWRLTARAITADTLVGEQTVDIVASKPLLLRPTLPRALTVGDRPVLQAVVQNTTNAAIEATVQVTPNPALTVEGPLEQRVNVPANSTALVRWQASVNPPPGDADEAILTLRASGGGYDDAVEARVPLRFLTTAEATASAGQVLDQVVETVQLPPEKAAADARVELELTPSLVAGITRGVEQLARSPYLSSEATVSSFMPAAAAYRLLQQAGFDDPQLRATLERSLTVGVQRLSVLQKIDGGWGWWNADESDPYLTAYAVQGLVEAQRAGFTVDPAILDRAMVFLTEALDAAPSLRSPLSDPNTRAYVLFVLGEAGKPDRGRAVNLYNERSALNVAGKAHLLMTLQAAGSEESRIRTLIAELMGSAVLTTSDAHWEVGGMSLWALDSDVTATGLALRSLLRTDPQNFLIPGAARWLMGERERDIWRTTYDSAGAVLALAEYAAQTGDLQADYRYRVALDGRTIREAVVSPATLRETDRVTIAGADLKPEGSQVLLQRQAAADQSGKGRLYYTLRVRYREDAAGAQALDRGFGVQREYIAVASDTLSPTGQLITQARQGDLVQVRITLSIPTDVRYLTVEDFLPGGLEALDTSLKTTTAAVRDAELMPEGEEQPYWWHFGHTEVRAGRVALFATDLPKGTYTYTYLARATVPGIYAAPPATAYRAYAPEEFGRSAGASFTVVAP
>NC_009767.1|WP_157042647.1|3363775_3364009_+|hypothetical-protein
MWCRPWRTGGVHGRATGVRSWARHRRSFMGAPPAFVHGRATGVRSWARHGRSFMGAPEARHGRSFTGAPRAFVHGRA
>NC_009767.1|WP_157042834.1|3364597_3367132_-|PBP1A-family-penicillin-binding-protein
MGRFFRETLRAAGAGVVVLALLCIWLWVSTDLPSPERLRARAALGATRVLDRHGRLLYSVPDPMGAQRRPIPLSQMSPALIQATIAAEDASFYDNPGIDLRGIARAIWLNLRKGQIVAGGSTITQQLARSFLIDPTLAQERSLERKAREIVLALKLTAVLSKDEILELYLNQTYYGAMSYGVEAASQRFFGKSARDLDLAEAALLAGLPQAPSRYDPFASPDAARARQRDVLAAMVRTGFITPTEAESAADEPLHFRSNCVTPGCLPRAPHFVFFVLEQLAAELGPDAVARGGLTITTTLDLGLQEAAELALRRHLEALTNPRDGSPDRRARNGAVVVLNPRDGAILAMVGSPDFTNDAIQGQVNAALALRQPGSAIKPLTYAAALERGWTPATTILDIPTAFTDAHGRVYAPQNYDRAFHGPLSLREALATSSNVAAVRTLDFIGIPALLEMASRLGIRSLGDEPGRFGLALTLGGGEVTLLELTGAYAAFANGGMRVTPYAIRDISSASLPDTSTPRTREAPLPALDPQIAYLISDMLSDRYARMRAFGGALDIDRPAAVKTGTTTDWRDNWTIGYTPDRAVGVWIGNADGRRMEAVSGVTGAAPVWRQVMLAAHQGLPPRSFVPPPGIVEVTICAEGGLLPSPVCPATRLERFAAGTAPQRPDDTHVMVRVDPARECRAPDDYPQTRTMLRIYRLLPPEAEPWAVSAGVPRPPRAVCPLLPDSARERRDAAHPAGNAQTGEETNVSTWQSIPLVITSPAHGAVFALSPGVSIEHQRIAITAGAIRDIEEVTVFVDSEPVAVAPRAFWQLQPGIHRVWAEGRDASGRIVRSPVVEFEVRSAP
>NC_009767.1|WP_012121103.1|3367300_3368134_+|metallophosphoesterase
MHIYYLNKDVQTMRIIVTADLHYRPAKRDSYLAFAEWVRQRNPDCFIIAGDIGHPLRLFRRGLQLFRDLTCTRAVIAGNHDVYRSDHDSRSLWESWLPQIAREEGFIWLENDVLTLGTLGICGTMAWYDYSSRAPHLALGDHEYRVLKGSVNHDADYIDWPWSDRAMARYLAKGFANRLETLIGNPDVSQILVVTHVPIIEAAVPRDPENDFWSLMSAYLGNLTLGKFVLDQPKVSHIVSGHLHRAGRWTISGRHGPVECHVVGSRPGEPTAVELNF
>NC_009767.1|WP_012121104.1|3368212_3369013_-|DUF4058-family-protein
MHSPFPGMDPFLEAPDLWPDVHTRLIVGISDVLAEKLSPRFIVAIEQRLIVAEDDSPLALGAIIPDLAVVTPARPGVTAPLDANYTAPTLIEPLPEPEVRERFIEIRDARTRRVVTIIELLSPANKTPGTPSAIAFERKRSVVFESRTHWIEIDLLRAGTRFEATAGKSDYCVLLKRGTDYRYAAWFIDLRDPLPTILAPTTADFGDVTLNLQQVFETAYARAHYADAVDYTRPVPPPPLPPADAAWVREQVRRWLDARQQPRDAG
>NC_009767.1|WP_012121105.1|3369061_3369868_-|DUF4058-family-protein
MRSPFPGMDPFLEAPDLWPDVHTELISGMRSILAEKLSPRFIVAIEQRLIVAEDDSPLALGAIIPDLAVVTPARPGVTAPLDANYTAPTLIEPLPEPEVRERFIEIRDARTRRVVTIIELLSPANKTPGTPSAIAFERKRSVVFESRTHWIEIDLLRAGTRFEATAGKSDYCVLLKRGTDYRYAAWFIDLRDPLPTILAPTTADFGDVTLNLQQVFETAYARAHYADAVDYTRPVPPPPLPPADAAWVREQVRRWLDARQQPRDAGES
>NC_009767.1|WP_012121106.1|3369925_3370192_+|zinc/iron-chelating-domain-containing-protein
MQLIECRAGCGACCIAPSISSPIPGMPRGKPAGMRCIQLSADNRCMLFGNPERPAVCASLQPTVEMCGTTNEEAFIILTILERMTSPE
>NC_009767.1|WP_012121107.1|3370207_3370639_+|hypothetical-protein
MPDVSAPTTPMWRRWLAHLWYGWGNSLTYWGLRTTDVSFFRAAERAYSRAIALWPEFSGAYFQRGIIRERELNQRAAGLRDLSQAIVLSPEWPEPYLRRGLIRRFHGNPHDAIADLERYLALSGDSSWRDEAERQIAALRAEC
>NC_009767.1|WP_012121108.1|3370640_3371843_+|MFS-transporter
MPDETPCSIASSAAPTPIADLTMAHLVIVTGGRLALVAAFRIIYPLQPFLTGELNVDLRAVSALITVQLAASMLSPIGGALADTRGERATMSGGLAIFVLGTALCALSPSFTTFLIGYTLVGLAIALYQPAAQAYLSARTPYARRGWALGVFETSWALGALLGVAPLMQIVQTTQQSMPAFWVLSAAGLASLALVWTLLPDGSRNLRATAHRIDWRALRAPGPLLALLFVASTLCAYDLIQIVQAPWLRETLAVNEAQLGQLVALAGIGELIGAMGVALLGDRLGIRRTTAAGFLLAAMCVAALPFVGREWTWLLPVYLLLYLSFEYAIVAAFPLISAVAPTARGTMLALSAAAIGAGRVAASLVATSLWLTLGIGWTAMITATILCGSLLCLLAVKPRE
>NC_009767.1|WP_012121109.1|3372018_3372312_-|hypothetical-protein
MSRTERRLLTVDVDRRGYGRRYTSLPVDELCQDGFSINFEGAYIRPEHIDVRVGDIVRWRHEDRRFQGRVADVRREELALHVTLADVAPLPPDAFFP

Crispr_ID: NC_009767_67

• CRISPR_ID: NC_009767_67
• CRISPR_location: 3447453-3453071
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 75 spacers
• Cas_protein_info: WYL,cas2,cas1,RT,csx15,csx1

Consensus repeat of NC_009767_67

Consensus_repeat	Method
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CRISPRCasFinder
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CRT
AAAAAAACAAAAGCCCCGCCATGAAGGGGATTGAAAC	PILER-CR
CGGAAAAAAACAAAAGCCCCGCCATGAAGGGGATTGAAAC	PILER-CR
AAAAAAACAAAAGCCCCGCCATGAAGGGGATTGAAAC	PILER-CR
TCCGCCTCAAAAAAACAAAAGCCCCGCCATGAAGGGGATTGAAAC	PILER-CR
AAAAAAACAAAAGCCCCGCCATGAAGGGGATTGAAAC	PILER-CR

spacers of NC_009767_67

>67.1|3447490|38|NC_009767|CRISPRCasFinder,CRT
GATCTGCCCCTAGGTAGACCTTCCTACACCCACCCCGT
>67.2|3447565|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR
AAACACCCGGCGGGCGAGGTCGACCTCGACTACCT
>67.3|3447637|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GCGATGCACGGGGGGCGCATGAATGCGATGGCCAC
>67.4|3447709|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TAGCCCGCGAAAACAAGCTTCCGAGCGTGGCAGCGCTC
>67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GACCGGCAGACCGAGGAGCACAGCGCCCGCGCCATGT
>67.6|3447858|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ACCGCAGCCGAGATGGTGGTCGGGTTGCACCTCGCGGT
>67.7|3447933|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GCCTGCATCCCACTTCCTCCTGCTGACCCACCCTCAG
>67.8|3448007|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CGCCTTGGCGCGCGGGTGCGGGTGAAATAAACCGCAT
>67.9|3448081|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ACCGGGTTCGGCTGGAATTCCTCCCCGAGCACGTCGA
>67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GGGAAGGGGTGGCCCGCGTCGAGCAGGCCGCCGACCAG
>67.11|3448230|41|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CTGTGCGTCTGGTCGGGTTCCGCCGTGGCGCCATGCAGCGT
>67.12|3448308|37|NC_009767|CRISPRCasFinder,CRT
GAGGGATCCATGATCAGAGGTTGGTGGCGTTCGTGGT
>67.13|3448382|37|NC_009767|CRISPRCasFinder,CRT
TGTGGAACGAGCCAAACCCTTGGCGGCAGCGCGGCGT
>67.14|3448456|36|NC_009767|CRISPRCasFinder,CRT
CCGCCCAGAGATCGAGCGGGTCATCTGGCTGGACAA
>67.15|3448529|40|NC_009767|CRISPRCasFinder,CRT
GCGCCGGGTCGACCGCCGCCGCGCGGCGATGGTACGCTGG
>67.16|3448606|37|NC_009767|CRISPRCasFinder,CRT
CCGGTCCCGCCCTCGCCCTCGACTTCGAGGAGACCCG
>67.17|3448680|26|NC_009767|CRISPRCasFinder,CRT
GCGCGTACGGCTCGCAGCGGCGACGT
>67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT
GATCATCGCCGCCGCCATCGTCGGCCTCGAGAAGCTC
>67.19|3448817|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GATTATTCTTCCCTTTGCACTGCTCTCGTATCGCAGT
>67.20|3448891|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ACGGAGGAGCCCACGGCCGAGCCCACCGCCGCCCCGGT
>67.21|3448966|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GCTGCGCGCAGCACCAGGACCTGGAGGCGACCCGGCGGT
>67.22|3449042|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CATCGACCTGGACTGCTTCCAGGGCACCATCGAGCTC
>67.23|3449116|40|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GGATCCCGCCGCGTGTCGTGCTTCATTGAAAGGAGCACCC
>67.24|3449193|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GGATCATCTCGATCGCGGAGGCTGAGCAGGCGGCGC
>67.25|3449266|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
>67.26|3449342|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
>67.27|3449415|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
>67.28|3449491|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
>67.29|3449564|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ATATTGTATTCTCTGTAATATTCATGAAGAACCCTCGA
>67.30|3449639|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCAAGACCATCGACCTGGACTGCTTCCAGGGCACCAT
>67.31|3449713|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GAACGGCGGCAACGGCGGCCAGGATGGCGAGAAGGGCGA
>67.32|3449789|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCGTATCCATTGCGTCGGTGATGACAGTATCTTTAGT
>67.33|3449863|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCCTCGCCGCCGTATGTCCTCTACTTGATGTCTACTG
>67.34|3449937|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ACGTGATCACGATGGGCCATGTGAGGTTCAGCGTGAC
>67.35|3450011|40|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCGACCGAGACGCCCAAGCCGACCGAGACGCCCAAGCCGC
>67.36|3450088|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GGGCTGCATTTGACATCTTATGGACTCACTTCCGTAG
>67.37|3450162|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GCCACCGCCCCCCAGGGCAACGGCGAGGCCCCGACCG
>67.38|3450236|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TCCCCGGCTCCGGCATCCTGGATACGGGGTACTGGGA
>67.39|3450310|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CGTAGAGAGAATTTCTCTAAAGCTCCGGCCACCGCATC
>67.40|3450385|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCCCCGCCGGAGGCGGGGGAAGGAGGAAGCCATGAGAT
>67.41|3450460|40|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCGAAGAGGAAGCGGAACTCCGCGCGCGGAAGCGCCGCGC
>67.42|3450537|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GGGTGGCCGCGGTCGAGCGGGCCGCAGACCAGCGCG
>67.43|3450610|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TCGGCGCCATGTGCGCCAGCTCGAAGTGGAGCTGGCGT
>67.44|3450685|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GAGGCGCCCACGCCGCGCGCGTGCAGCAGAAGGCGCTG
>67.45|3450760|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GTGCAGCGCTTCGCGTCCCGAGGCGCTGCCCATGGCGC
>67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TCGGCGCCGGCGGCGGGGCGGGCGGCGGCGCGGCGCGT
>67.47|3450910|40|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ACTTCGCCGCATTCCTGGCGAGACGATGGAACGTCTCGTT
>67.48|3450987|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCGGGCGCCCGCGAGCTGACGGGCTACGCGCTCATCGT
>67.49|3451062|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TGATCATCCGGTACTGCGTAGCCCCGGACCCGTGCAG
>67.50|3451136|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GTCTCAGATCATCCAGTCGGACGTTCGCCTGTCGGAC
>67.51|3451210|40|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CAAGGCTCAGCAGCTTCGCGATGAGATCAAGCGCCAGAAG
>67.52|3451287|38|NC_009767|CRISPRCasFinder,CRT
GGGAGTCATGCAGATGGTGGCATGTCTCCCGGAAGGAC
>67.53|3451362|35|NC_009767|CRISPRCasFinder,CRT
CTGGTCTCGGCGGCTCCGCTCCTGGGGGAGGAGCG
>67.54|3451434|37|NC_009767|CRISPRCasFinder,CRT
GCGGGGGACTCCATCAATGATACGGAGATACGGACCA
>67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT
GGCGCGAGGCGCTTGCGCGGCTGCTCGCCGGCATCGC
>67.56|3451582|37|NC_009767|CRISPRCasFinder,CRT
CAGGCGGAGATGGTGACGCCTGAATCGTTTATCGCGG
>67.57|3451656|38|NC_009767|CRISPRCasFinder,CRT
GCTCCGCTCCTGGGGGAGGAGCGGAGCCGACGCGTGAT
>67.58|3451731|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CTGGACGCCTGCGCGCGCCTCCAGCGCTGGGGAACGGC
>67.59|3451806|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ATCCCCCCGCCGGAGGCGGGGGAAGGAGGGAGCATGT
>67.60|3451880|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GGGAAGGAGGGAGCATGTGGTGGAGGAGATGGTTCGC
>67.61|3451954|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
AAGATGAGGAGGCCCTCCGCCGGGTCTTCGGCAACAA
>67.62|3452028|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCGCTTCCGCTTCCTCCCGAGGAGGAAGCGGCGCTCC
>67.63|3452102|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CTGGGGGCGCTTCGTTCCCACCGCCGCGTGGCCGTCGT
>67.64|3452177|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CGCTCGAAACGGAGGCGGCCTGGGCGGCGCACCAGGCCG
>67.65|3452253|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GCCTCCACCCGCATCCGTGCGATGCGGGCGGAGTTGGG
>67.66|3452328|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCACGCTGGAGACGCAGAAGGGCAACGCCGACGCCGC
>67.67|3452402|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CGGCACGGCCGACTGCAGCCTGAACGGCACCGCCAA
>67.68|3452475|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCATTCCTTCCCTCTCCCGAATGGGAGAGGGAAGGCGC
>67.69|3452550|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TCGGCGAAAAGTTCGCCGTGTGGAATGGGGATGATTTT
>67.70|3452625|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCGGGGAGGCCGGCTATCCGTGCGACCCACCCATCCC
>67.71|3452699|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
AACGGGACGCCGCCCACCTGGCGCGGCGGTTGCTCAG
>67.72|3452773|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CGCGGGAAGCGGTCGAGCGGATCGAACGGGACGCCGA
>67.73|3452847|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCTTACAGGTCGCCGGGTGGTTTGCCGGCCCCATGC
>67.74|3452920|41|NC_009767|CRISPRCasFinder,CRT,PILER-CR
AAGAGGCGCGGCTCCTTCTCAAACACGTTCCTGAGGCGCGC
>67.75|3452998|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GGGAGGAGCGGAGCCGCCGCTTGATTGACCAGCTCGC
>67.76|3448459|33|NC_009767|PILER-CR
CCCAGAGATCGAGCGGGTCATCTGGCTGGACAA
>67.77|3448532|40|NC_009767|PILER-CR
GCGCCGGGTCGACCGCCGCCGCGCGGCGATGGTACGCTGG
>67.78|3451442|29|NC_009767|PILER-CR
CTCCATCAATGATACGGAGATACGGACCA
>67.79|3451516|36|NC_009767|PILER-CR
GCGCGAGGCGCTTGCGCGGCTGCTCGCCGGCATCGC

CRISPR arrays and Neighbor proteins around NC_009767_67

CRISPR arrays

The CRISPR arrays of NC_009767_67

>merge|NC_009767|67|3447453-3453071|CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR,PILER-CR,PILER-CR
GCGGTCATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGATCTGCCCCTAGGTAGACCTTCCTACACCCACCCCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTAAACACCCGGCGGGCGAGGTCGACCTCGACTACCTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGATGCACGGGGGGCGCATGAATGCGATGGCCACGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTAGCCCGCGAAAACAAGCTTCCGAGCGTGGCAGCGCTCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGACCGGCAGACCGAGGAGCACAGCGCCCGCGCCATGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTACCGCAGCCGAGATGGTGGTCGGGTTGCACCTCGCGGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCCTGCATCCCACTTCCTCCTGCTGACCCACCCTCAGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCGCCTTGGCGCGCGGGTGCGGGTGAAATAAACCGCATGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTACCGGGTTCGGCTGGAATTCCTCCCCGAGCACGTCGAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGAAGGGGTGGCCCGCGTCGAGCAGGCCGCCGACCAGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCTGTGCGTCTGGTCGGGTTCCGCCGTGGCGCCATGCAGCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGAGGGATCCATGATCAGAGGTTGGTGGCGTTCGTGGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTGTGGAACGAGCCAAACCCTTGGCGGCAGCGCGGCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGCCCAGAGATCGAGCGGGTCATCTGGCTGGACAAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGCCGGGTCGACCGCCGCCGCGCGGCGATGGTACGCTGGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGGTCCCGCCCTCGCCCTCGACTTCGAGGAGACCCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGCGTACGGCTCGCAGCGGCGACGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGATCATCGCCGCCGCCATCGTCGGCCTCGAGAAGCTCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGATTATTCTTCCCTTTGCACTGCTCTCGTATCGCAGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTACGGAGGAGCCCACGGCCGAGCCCACCGCCGCCCCGGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCTGCGCGCAGCACCAGGACCTGGAGGCGACCCGGCGGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCATCGACCTGGACTGCTTCCAGGGCACCATCGAGCTCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGATCCCGCCGCGTGTCGTGCTTCATTGAAAGGAGCACCCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGATCATCTCGATCGCGGAGGCTGAGCAGGCGGCGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTATATTGTATTCTCTGTAATATTCATGAAGAACCCTCGAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCAAGACCATCGACCTGGACTGCTTCCAGGGCACCATGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGAACGGCGGCAACGGCGGCCAGGATGGCGAGAAGGGCGAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGTATCCATTGCGTCGGTGATGACAGTATCTTTAGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCCTCGCCGCCGTATGTCCTCTACTTGATGTCTACTGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTACGTGATCACGATGGGCCATGTGAGGTTCAGCGTGACGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGACCGAGACGCCCAAGCCGACCGAGACGCCCAAGCCGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGCTGCATTTGACATCTTATGGACTCACTTCCGTAGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCCACCGCCCCCCAGGGCAACGGCGAGGCCCCGACCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTCCCCGGCTCCGGCATCCTGGATACGGGGTACTGGGAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCGTAGAGAGAATTTCTCTAAAGCTCCGGCCACCGCATCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCCCCGCCGGAGGCGGGGGAAGGAGGAAGCCATGAGATGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGAAGAGGAAGCGGAACTCCGCGCGCGGAAGCGCCGCGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGTGGCCGCGGTCGAGCGGGCCGCAGACCAGCGCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTCGGCGCCATGTGCGCCAGCTCGAAGTGGAGCTGGCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGAGGCGCCCACGCCGCGCGCGTGCAGCAGAAGGCGCTGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGTGCAGCGCTTCGCGTCCCGAGGCGCTGCCCATGGCGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTCGGCGCCGGCGGCGGGGCGGGCGGCGGCGCGGCGCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTACTTCGCCGCATTCCTGGCGAGACGATGGAACGTCTCGTTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGGGCGCCCGCGAGCTGACGGGCTACGCGCTCATCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTGATCATCCGGTACTGCGTAGCCCCGGACCCGTGCAGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGTCTCAGATCATCCAGTCGGACGTTCGCCTGTCGGACGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCAAGGCTCAGCAGCTTCGCGATGAGATCAAGCGCCAGAAGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGAGTCATGCAGATGGTGGCATGTCTCCCGGAAGGACGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCTGGTCTCGGCGGCTCCGCTCCTGGGGGAGGAGCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGGGGGACTCCATCAATGATACGGAGATACGGACCAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGCGCGAGGCGCTTGCGCGGCTGCTCGCCGGCATCGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCAGGCGGAGATGGTGACGCCTGAATCGTTTATCGCGGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCTCCGCTCCTGGGGGAGGAGCGGAGCCGACGCGTGATGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCTGGACGCCTGCGCGCGCCTCCAGCGCTGGGGAACGGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTATCCCCCCGCCGGAGGCGGGGGAAGGAGGGAGCATGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGAAGGAGGGAGCATGTGGTGGAGGAGATGGTTCGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTAAGATGAGGAGGCCCTCCGCCGGGTCTTCGGCAACAAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGCTTCCGCTTCCTCCCGAGGAGGAAGCGGCGCTCCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCTGGGGGCGCTTCGTTCCCACCGCCGCGTGGCCGTCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCGCTCGAAACGGAGGCGGCCTGGGCGGCGCACCAGGCCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCCTCCACCCGCATCCGTGCGATGCGGGCGGAGTTGGGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCACGCTGGAGACGCAGAAGGGCAACGCCGACGCCGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCGGCACGGCCGACTGCAGCCTGAACGGCACCGCCAAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCATTCCTTCCCTCTCCCGAATGGGAGAGGGAAGGCGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTCGGCGAAAAGTTCGCCGTGTGGAATGGGGATGATTTTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGGGGAGGCCGGCTATCCGTGCGACCCACCCATCCCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTAACGGGACGCCGCCCACCTGGCGCGGCGGTTGCTCAGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCGCGGGAAGCGGTCGAGCGGATCGAACGGGACGCCGAGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCTTACAGGTCGCCGGGTGGTTTGCCGGCCCCATGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTAAGAGGCGCGGCTCCTTCTCAAACACGTTCCTGAGGCGCGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGAGGAGCGGAGCCGCCGCTTGATTGACCAGCTCGCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT

>NC_009767|67|58|3447453-3453071|CRISPRCasFinder
GCGGTCATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATCTGCCCCTAGGTAGACCTTCCTACACCCACCCCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAACACCCGGCGGGCGAGGTCGACCTCGACTACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGATGCACGGGGGGCGCATGAATGCGATGGCCAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TAGCCCGCGAAAACAAGCTTCCGAGCGTGGCAGCGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GACCGGCAGACCGAGGAGCACAGCGCCCGCGCCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGCAGCCGAGATGGTGGTCGGGTTGCACCTCGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTGCATCCCACTTCCTCCTGCTGACCCACCCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCCTTGGCGCGCGGGTGCGGGTGAAATAAACCGCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGGGTTCGGCTGGAATTCCTCCCCGAGCACGTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGGGTGGCCCGCGTCGAGCAGGCCGCCGACCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGTGCGTCTGGTCGGGTTCCGCCGTGGCGCCATGCAGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAGGGATCCATGATCAGAGGTTGGTGGCGTTCGTGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGTGGAACGAGCCAAACCCTTGGCGGCAGCGCGGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGCCCAGAGATCGAGCGGGTCATCTGGCTGGACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGCCGGGTCGACCGCCGCCGCGCGGCGATGGTACGCTGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGTCCCGCCCTCGCCCTCGACTTCGAGGAGACCCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGCGTACGGCTCGCAGCGGCGACGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATCATCGCCGCCGCCATCGTCGGCCTCGAGAAGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATTATTCTTCCCTTTGCACTGCTCTCGTATCGCAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGGAGGAGCCCACGGCCGAGCCCACCGCCGCCCCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCTGCGCGCAGCACCAGGACCTGGAGGCGACCCGGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CATCGACCTGGACTGCTTCCAGGGCACCATCGAGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCCCGCCGCGTGTCGTGCTTCATTGAAAGGAGCACCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCATCTCGATCGCGGAGGCTGAGCAGGCGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATATTGTATTCTCTGTAATATTCATGAAGAACCCTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCAAGACCATCGACCTGGACTGCTTCCAGGGCACCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAACGGCGGCAACGGCGGCCAGGATGGCGAGAAGGGCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGTATCCATTGCGTCGGTGATGACAGTATCTTTAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCTCGCCGCCGTATGTCCTCTACTTGATGTCTACTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGTGATCACGATGGGCCATGTGAGGTTCAGCGTGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGACCGAGACGCCCAAGCCGACCGAGACGCCCAAGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGCTGCATTTGACATCTTATGGACTCACTTCCGTAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCACCGCCCCCCAGGGCAACGGCGAGGCCCCGACCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCCCCGGCTCCGGCATCCTGGATACGGGGTACTGGGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGTAGAGAGAATTTCTCTAAAGCTCCGGCCACCGCATC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCCCGCCGGAGGCGGGGGAAGGAGGAAGCCATGAGAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGAAGAGGAAGCGGAACTCCGCGCGCGGAAGCGCCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTGGCCGCGGTCGAGCGGGCCGCAGACCAGCGCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCATGTGCGCCAGCTCGAAGTGGAGCTGGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAGGCGCCCACGCCGCGCGCGTGCAGCAGAAGGCGCTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTGCAGCGCTTCGCGTCCCGAGGCGCTGCCCATGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCGGCGGCGGGGCGGGCGGCGGCGCGGCGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACTTCGCCGCATTCCTGGCGAGACGATGGAACGTCTCGTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGCGCCCGCGAGCTGACGGGCTACGCGCTCATCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATCATCCGGTACTGCGTAGCCCCGGACCCGTGCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTCTCAGATCATCCAGTCGGACGTTCGCCTGTCGGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CAAGGCTCAGCAGCTTCGCGATGAGATCAAGCGCCAGAAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAGTCATGCAGATGGTGGCATGTCTCCCGGAAGGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGTCTCGGCGGCTCCGCTCCTGGGGGAGGAGCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGGGGGACTCCATCAATGATACGGAGATACGGACCA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGCGCGAGGCGCTTGCGCGGCTGCTCGCCGGCATCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CAGGCGGAGATGGTGACGCCTGAATCGTTTATCGCGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCTCCGCTCCTGGGGGAGGAGCGGAGCCGACGCGTGAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGACGCCTGCGCGCGCCTCCAGCGCTGGGGAACGGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATCCCCCCGCCGGAGGCGGGGGAAGGAGGGAGCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGAGGGAGCATGTGGTGGAGGAGATGGTTCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGATGAGGAGGCCCTCCGCCGGGTCTTCGGCAACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGCTTCCGCTTCCTCCCGAGGAGGAAGCGGCGCTCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGGGGCGCTTCGTTCCCACCGCCGCGTGGCCGTCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCTCGAAACGGAGGCGGCCTGGGCGGCGCACCAGGCCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTCCACCCGCATCCGTGCGATGCGGGCGGAGTTGGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCACGCTGGAGACGCAGAAGGGCAACGCCGACGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGGCACGGCCGACTGCAGCCTGAACGGCACCGCCAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCATTCCTTCCCTCTCCCGAATGGGAGAGGGAAGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGAAAAGTTCGCCGTGTGGAATGGGGATGATTTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGGAGGCCGGCTATCCGTGCGACCCACCCATCCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AACGGGACGCCGCCCACCTGGCGCGGCGGTTGCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCGGGAAGCGGTCGAGCGGATCGAACGGGACGCCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCTTACAGGTCGCCGGGTGGTTTGCCGGCCCCATGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGAGGCGCGGCTCCTTCTCAAACACGTTCCTGAGGCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAGGAGCGGAGCCGCCGCTTGATTGACCAGCTCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT

>NC_009767|67|9|3447453-3453071|CRT
GCGGTCATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATCTGCCCCTAGGTAGACCTTCCTACACCCACCCCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAACACCCGGCGGGCGAGGTCGACCTCGACTACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGATGCACGGGGGGCGCATGAATGCGATGGCCAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TAGCCCGCGAAAACAAGCTTCCGAGCGTGGCAGCGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GACCGGCAGACCGAGGAGCACAGCGCCCGCGCCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGCAGCCGAGATGGTGGTCGGGTTGCACCTCGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTGCATCCCACTTCCTCCTGCTGACCCACCCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCCTTGGCGCGCGGGTGCGGGTGAAATAAACCGCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGGGTTCGGCTGGAATTCCTCCCCGAGCACGTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGGGTGGCCCGCGTCGAGCAGGCCGCCGACCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGTGCGTCTGGTCGGGTTCCGCCGTGGCGCCATGCAGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAGGGATCCATGATCAGAGGTTGGTGGCGTTCGTGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGTGGAACGAGCCAAACCCTTGGCGGCAGCGCGGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGCCCAGAGATCGAGCGGGTCATCTGGCTGGACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGCCGGGTCGACCGCCGCCGCGCGGCGATGGTACGCTGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGTCCCGCCCTCGCCCTCGACTTCGAGGAGACCCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGCGTACGGCTCGCAGCGGCGACGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATCATCGCCGCCGCCATCGTCGGCCTCGAGAAGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATTATTCTTCCCTTTGCACTGCTCTCGTATCGCAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGGAGGAGCCCACGGCCGAGCCCACCGCCGCCCCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCTGCGCGCAGCACCAGGACCTGGAGGCGACCCGGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CATCGACCTGGACTGCTTCCAGGGCACCATCGAGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCCCGCCGCGTGTCGTGCTTCATTGAAAGGAGCACCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCATCTCGATCGCGGAGGCTGAGCAGGCGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATATTGTATTCTCTGTAATATTCATGAAGAACCCTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCAAGACCATCGACCTGGACTGCTTCCAGGGCACCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAACGGCGGCAACGGCGGCCAGGATGGCGAGAAGGGCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGTATCCATTGCGTCGGTGATGACAGTATCTTTAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCTCGCCGCCGTATGTCCTCTACTTGATGTCTACTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGTGATCACGATGGGCCATGTGAGGTTCAGCGTGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGACCGAGACGCCCAAGCCGACCGAGACGCCCAAGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGCTGCATTTGACATCTTATGGACTCACTTCCGTAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCACCGCCCCCCAGGGCAACGGCGAGGCCCCGACCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCCCCGGCTCCGGCATCCTGGATACGGGGTACTGGGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGTAGAGAGAATTTCTCTAAAGCTCCGGCCACCGCATC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCCCGCCGGAGGCGGGGGAAGGAGGAAGCCATGAGAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGAAGAGGAAGCGGAACTCCGCGCGCGGAAGCGCCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTGGCCGCGGTCGAGCGGGCCGCAGACCAGCGCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCATGTGCGCCAGCTCGAAGTGGAGCTGGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAGGCGCCCACGCCGCGCGCGTGCAGCAGAAGGCGCTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTGCAGCGCTTCGCGTCCCGAGGCGCTGCCCATGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCGGCGGCGGGGCGGGCGGCGGCGCGGCGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACTTCGCCGCATTCCTGGCGAGACGATGGAACGTCTCGTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGCGCCCGCGAGCTGACGGGCTACGCGCTCATCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATCATCCGGTACTGCGTAGCCCCGGACCCGTGCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTCTCAGATCATCCAGTCGGACGTTCGCCTGTCGGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CAAGGCTCAGCAGCTTCGCGATGAGATCAAGCGCCAGAAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAGTCATGCAGATGGTGGCATGTCTCCCGGAAGGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGTCTCGGCGGCTCCGCTCCTGGGGGAGGAGCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGGGGGACTCCATCAATGATACGGAGATACGGACCA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGCGCGAGGCGCTTGCGCGGCTGCTCGCCGGCATCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CAGGCGGAGATGGTGACGCCTGAATCGTTTATCGCGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCTCCGCTCCTGGGGGAGGAGCGGAGCCGACGCGTGAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGACGCCTGCGCGCGCCTCCAGCGCTGGGGAACGGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATCCCCCCGCCGGAGGCGGGGGAAGGAGGGAGCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGAGGGAGCATGTGGTGGAGGAGATGGTTCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGATGAGGAGGCCCTCCGCCGGGTCTTCGGCAACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGCTTCCGCTTCCTCCCGAGGAGGAAGCGGCGCTCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGGGGCGCTTCGTTCCCACCGCCGCGTGGCCGTCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCTCGAAACGGAGGCGGCCTGGGCGGCGCACCAGGCCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTCCACCCGCATCCGTGCGATGCGGGCGGAGTTGGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCACGCTGGAGACGCAGAAGGGCAACGCCGACGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGGCACGGCCGACTGCAGCCTGAACGGCACCGCCAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCATTCCTTCCCTCTCCCGAATGGGAGAGGGAAGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGAAAAGTTCGCCGTGTGGAATGGGGATGATTTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGGAGGCCGGCTATCCGTGCGACCCACCCATCCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AACGGGACGCCGCCCACCTGGCGCGGCGGTTGCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCGGGAAGCGGTCGAGCGGATCGAACGGGACGCCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCTTACAGGTCGCCGGGTGGTTTGCCGGCCCCATGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGAGGCGCGGCTCCTTCTCAAACACGTTCCTGAGGCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAGGAGCGGAGCCGCCGCTTGATTGACCAGCTCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT

>NC_009767|67|8|3447528-3448307|PILER-CR
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAACACCCGGCGGGCGAGGTCGACCTCGACTACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGATGCACGGGGGGCGCATGAATGCGATGGCCAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TAGCCCGCGAAAACAAGCTTCCGAGCGTGGCAGCGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GACCGGCAGACCGAGGAGCACAGCGCCCGCGCCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGCAGCCGAGATGGTGGTCGGGTTGCACCTCGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTGCATCCCACTTCCTCCTGCTGACCCACCCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCCTTGGCGCGCGGGTGCGGGTGAAATAAACCGCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGGGTTCGGCTGGAATTCCTCCCCGAGCACGTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGGGTGGCCCGCGTCGAGCAGGCCGCCGACCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGTGCGTCTGGTCGGGTTCCGCCGTGGCGCCATGCAGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGAGGGATCCATGATCAGAGGTTGGTGGCGTTCGTGGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTGTGGAACGAGCCAAACCCTTGGCGGCAGCGCGGCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCG	CCCAGAGATCGAGCGGGTCATCTGGCTGGACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCG	CCGGGTCGACCGCCGCCGCGCGGCGATGGTACGCTGGGTT
TCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGGTCCCGCCCTCGCCCTCGACTTCGAGGAGACCCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGCGTACGGCTCGCAGCGGCGACGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGATCATCGCCGCCGCCATCGTCGGCCTCGAGAAGCTCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATTATTCTTCCCTTTGCACTGCTCTCGTATCGCAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGGAGGAGCCCACGGCCGAGCCCACCGCCGCCCCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCTGCGCGCAGCACCAGGACCTGGAGGCGACCCGGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CATCGACCTGGACTGCTTCCAGGGCACCATCGAGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCCCGCCGCGTGTCGTGCTTCATTGAAAGGAGCACCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCATCTCGATCGCGGAGGCTGAGCAGGCGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATATTGTATTCTCTGTAATATTCATGAAGAACCCTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCAAGACCATCGACCTGGACTGCTTCCAGGGCACCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAACGGCGGCAACGGCGGCCAGGATGGCGAGAAGGGCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGTATCCATTGCGTCGGTGATGACAGTATCTTTAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCTCGCCGCCGTATGTCCTCTACTTGATGTCTACTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGTGATCACGATGGGCCATGTGAGGTTCAGCGTGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGACCGAGACGCCCAAGCCGACCGAGACGCCCAAGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGCTGCATTTGACATCTTATGGACTCACTTCCGTAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCACCGCCCCCCAGGGCAACGGCGAGGCCCCGACCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCCCCGGCTCCGGCATCCTGGATACGGGGTACTGGGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGTAGAGAGAATTTCTCTAAAGCTCCGGCCACCGCATC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCCCGCCGGAGGCGGGGGAAGGAGGAAGCCATGAGAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGAAGAGGAAGCGGAACTCCGCGCGCGGAAGCGCCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTGGCCGCGGTCGAGCGGGCCGCAGACCAGCGCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCATGTGCGCCAGCTCGAAGTGGAGCTGGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAGGCGCCCACGCCGCGCGCGTGCAGCAGAAGGCGCTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTGCAGCGCTTCGCGTCCCGAGGCGCTGCCCATGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCGGCGGCGGGGCGGGCGGCGGCGCGGCGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACTTCGCCGCATTCCTGGCGAGACGATGGAACGTCTCGTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGCGCCCGCGAGCTGACGGGCTACGCGCTCATCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATCATCCGGTACTGCGTAGCCCCGGACCCGTGCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTCTCAGATCATCCAGTCGGACGTTCGCCTGTCGGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CAAGGCTCAGCAGCTTCGCGATGAGATCAAGCGCCAGAAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGAGTCATGCAGATGGTGGCATGTCTCCCGGAAGGACGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCTGGTCTCGGCGGCTCCGCTCCTGGGGGAGGAGCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGGGGGA	CTCCATCAATGATACGGAGATACGGACCA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGCGCGAG	GCGCTTGCGCGGCTGCTCGCCGGCATCGCGTTTCAA
TCCCCTTCATGGCGGGGCTTTTGTTTTTTTCAGGCGGAGATGGTGACGCCTGAATCGTTTATCGCGGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCTCCGCTCCTGGGGGAGGAGCGGAGCCGACGCGTGATGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGACGCCTGCGCGCGCCTCCAGCGCTGGGGAACGGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATCCCCCCGCCGGAGGCGGGGGAAGGAGGGAGCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGAGGGAGCATGTGGTGGAGGAGATGGTTCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGATGAGGAGGCCCTCCGCCGGGTCTTCGGCAACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGCTTCCGCTTCCTCCCGAGGAGGAAGCGGCGCTCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGGGGCGCTTCGTTCCCACCGCCGCGTGGCCGTCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCTCGAAACGGAGGCGGCCTGGGCGGCGCACCAGGCCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTCCACCCGCATCCGTGCGATGCGGGCGGAGTTGGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCACGCTGGAGACGCAGAAGGGCAACGCCGACGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGGCACGGCCGACTGCAGCCTGAACGGCACCGCCAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCATTCCTTCCCTCTCCCGAATGGGAGAGGGAAGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGAAAAGTTCGCCGTGTGGAATGGGGATGATTTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGGAGGCCGGCTATCCGTGCGACCCACCCATCCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AACGGGACGCCGCCCACCTGGCGCGGCGGTTGCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCGGGAAGCGGTCGAGCGGATCGAACGGGACGCCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCTTACAGGTCGCCGGGTGGTTTGCCGGCCCCATGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGAGGCGCGGCTCCTTCTCAAACACGTTCCTGAGGCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAGGAGCGGAGCCGCCGCTTGATTGACCAGCTCGC


>NC_009767|67|9|3448419-3448608|PILER-CR
	AAACACCCGGCGGGCGAGGTCGACCTCGACTACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGATGCACGGGGGGCGCATGAATGCGATGGCCAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TAGCCCGCGAAAACAAGCTTCCGAGCGTGGCAGCGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GACCGGCAGACCGAGGAGCACAGCGCCCGCGCCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGCAGCCGAGATGGTGGTCGGGTTGCACCTCGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTGCATCCCACTTCCTCCTGCTGACCCACCCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCCTTGGCGCGCGGGTGCGGGTGAAATAAACCGCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGGGTTCGGCTGGAATTCCTCCCCGAGCACGTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGGGTGGCCCGCGTCGAGCAGGCCGCCGACCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGTGCGTCTGGTCGGGTTCCGCCGTGGCGCCATGCAGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGAGGGATCCATGATCAGAGGTTGGTGGCGTTCGTGGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTGTGGAACGAGCCAAACCCTTGGCGGCAGCGCGGCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCG	CCCAGAGATCGAGCGGGTCATCTGGCTGGACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCG	CCGGGTCGACCGCCGCCGCGCGGCGATGGTACGCTGGGTT
TCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGGTCCCGCCCTCGCCCTCGACTTCGAGGAGACCCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGCGTACGGCTCGCAGCGGCGACGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGATCATCGCCGCCGCCATCGTCGGCCTCGAGAAGCTCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATTATTCTTCCCTTTGCACTGCTCTCGTATCGCAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGGAGGAGCCCACGGCCGAGCCCACCGCCGCCCCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCTGCGCGCAGCACCAGGACCTGGAGGCGACCCGGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CATCGACCTGGACTGCTTCCAGGGCACCATCGAGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCCCGCCGCGTGTCGTGCTTCATTGAAAGGAGCACCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCATCTCGATCGCGGAGGCTGAGCAGGCGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATATTGTATTCTCTGTAATATTCATGAAGAACCCTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCAAGACCATCGACCTGGACTGCTTCCAGGGCACCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAACGGCGGCAACGGCGGCCAGGATGGCGAGAAGGGCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGTATCCATTGCGTCGGTGATGACAGTATCTTTAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCTCGCCGCCGTATGTCCTCTACTTGATGTCTACTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGTGATCACGATGGGCCATGTGAGGTTCAGCGTGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGACCGAGACGCCCAAGCCGACCGAGACGCCCAAGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGCTGCATTTGACATCTTATGGACTCACTTCCGTAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCACCGCCCCCCAGGGCAACGGCGAGGCCCCGACCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCCCCGGCTCCGGCATCCTGGATACGGGGTACTGGGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGTAGAGAGAATTTCTCTAAAGCTCCGGCCACCGCATC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCCCGCCGGAGGCGGGGGAAGGAGGAAGCCATGAGAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGAAGAGGAAGCGGAACTCCGCGCGCGGAAGCGCCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTGGCCGCGGTCGAGCGGGCCGCAGACCAGCGCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCATGTGCGCCAGCTCGAAGTGGAGCTGGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAGGCGCCCACGCCGCGCGCGTGCAGCAGAAGGCGCTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTGCAGCGCTTCGCGTCCCGAGGCGCTGCCCATGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCGGCGGCGGGGCGGGCGGCGGCGCGGCGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACTTCGCCGCATTCCTGGCGAGACGATGGAACGTCTCGTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGCGCCCGCGAGCTGACGGGCTACGCGCTCATCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATCATCCGGTACTGCGTAGCCCCGGACCCGTGCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTCTCAGATCATCCAGTCGGACGTTCGCCTGTCGGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CAAGGCTCAGCAGCTTCGCGATGAGATCAAGCGCCAGAAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGAGTCATGCAGATGGTGGCATGTCTCCCGGAAGGACGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCTGGTCTCGGCGGCTCCGCTCCTGGGGGAGGAGCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGGGGGA	CTCCATCAATGATACGGAGATACGGACCA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGCGCGAG	GCGCTTGCGCGGCTGCTCGCCGGCATCGCGTTTCAA
TCCCCTTCATGGCGGGGCTTTTGTTTTTTTCAGGCGGAGATGGTGACGCCTGAATCGTTTATCGCGGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCTCCGCTCCTGGGGGAGGAGCGGAGCCGACGCGTGATGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGACGCCTGCGCGCGCCTCCAGCGCTGGGGAACGGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATCCCCCCGCCGGAGGCGGGGGAAGGAGGGAGCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGAGGGAGCATGTGGTGGAGGAGATGGTTCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGATGAGGAGGCCCTCCGCCGGGTCTTCGGCAACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGCTTCCGCTTCCTCCCGAGGAGGAAGCGGCGCTCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGGGGCGCTTCGTTCCCACCGCCGCGTGGCCGTCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCTCGAAACGGAGGCGGCCTGGGCGGCGCACCAGGCCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTCCACCCGCATCCGTGCGATGCGGGCGGAGTTGGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCACGCTGGAGACGCAGAAGGGCAACGCCGACGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGGCACGGCCGACTGCAGCCTGAACGGCACCGCCAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCATTCCTTCCCTCTCCCGAATGGGAGAGGGAAGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGAAAAGTTCGCCGTGTGGAATGGGGATGATTTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGGAGGCCGGCTATCCGTGCGACCCACCCATCCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AACGGGACGCCGCCCACCTGGCGCGGCGGTTGCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCGGGAAGCGGTCGAGCGGATCGAACGGGACGCCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCTTACAGGTCGCCGGGTGGTTTGCCGGCCCCATGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGAGGCGCGGCTCCTTCTCAAACACGTTCCTGAGGCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAGGAGCGGAGCCGCCGCTTGATTGACCAGCTCGC


>NC_009767|67|10|3448780-3451286|PILER-CR
	AAACACCCGGCGGGCGAGGTCGACCTCGACTACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGATGCACGGGGGGCGCATGAATGCGATGGCCAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TAGCCCGCGAAAACAAGCTTCCGAGCGTGGCAGCGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GACCGGCAGACCGAGGAGCACAGCGCCCGCGCCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGCAGCCGAGATGGTGGTCGGGTTGCACCTCGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTGCATCCCACTTCCTCCTGCTGACCCACCCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCCTTGGCGCGCGGGTGCGGGTGAAATAAACCGCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGGGTTCGGCTGGAATTCCTCCCCGAGCACGTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGGGTGGCCCGCGTCGAGCAGGCCGCCGACCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGTGCGTCTGGTCGGGTTCCGCCGTGGCGCCATGCAGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGAGGGATCCATGATCAGAGGTTGGTGGCGTTCGTGGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTGTGGAACGAGCCAAACCCTTGGCGGCAGCGCGGCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCG	CCCAGAGATCGAGCGGGTCATCTGGCTGGACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCG	CCGGGTCGACCGCCGCCGCGCGGCGATGGTACGCTGGGTT
TCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGGTCCCGCCCTCGCCCTCGACTTCGAGGAGACCCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGCGTACGGCTCGCAGCGGCGACGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGATCATCGCCGCCGCCATCGTCGGCCTCGAGAAGCTCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATTATTCTTCCCTTTGCACTGCTCTCGTATCGCAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGGAGGAGCCCACGGCCGAGCCCACCGCCGCCCCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCTGCGCGCAGCACCAGGACCTGGAGGCGACCCGGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CATCGACCTGGACTGCTTCCAGGGCACCATCGAGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCCCGCCGCGTGTCGTGCTTCATTGAAAGGAGCACCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCATCTCGATCGCGGAGGCTGAGCAGGCGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATATTGTATTCTCTGTAATATTCATGAAGAACCCTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCAAGACCATCGACCTGGACTGCTTCCAGGGCACCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAACGGCGGCAACGGCGGCCAGGATGGCGAGAAGGGCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGTATCCATTGCGTCGGTGATGACAGTATCTTTAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCTCGCCGCCGTATGTCCTCTACTTGATGTCTACTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGTGATCACGATGGGCCATGTGAGGTTCAGCGTGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGACCGAGACGCCCAAGCCGACCGAGACGCCCAAGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGCTGCATTTGACATCTTATGGACTCACTTCCGTAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCACCGCCCCCCAGGGCAACGGCGAGGCCCCGACCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCCCCGGCTCCGGCATCCTGGATACGGGGTACTGGGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGTAGAGAGAATTTCTCTAAAGCTCCGGCCACCGCATC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCCCGCCGGAGGCGGGGGAAGGAGGAAGCCATGAGAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGAAGAGGAAGCGGAACTCCGCGCGCGGAAGCGCCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTGGCCGCGGTCGAGCGGGCCGCAGACCAGCGCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCATGTGCGCCAGCTCGAAGTGGAGCTGGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAGGCGCCCACGCCGCGCGCGTGCAGCAGAAGGCGCTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTGCAGCGCTTCGCGTCCCGAGGCGCTGCCCATGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCGGCGGCGGGGCGGGCGGCGGCGCGGCGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACTTCGCCGCATTCCTGGCGAGACGATGGAACGTCTCGTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGCGCCCGCGAGCTGACGGGCTACGCGCTCATCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATCATCCGGTACTGCGTAGCCCCGGACCCGTGCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTCTCAGATCATCCAGTCGGACGTTCGCCTGTCGGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CAAGGCTCAGCAGCTTCGCGATGAGATCAAGCGCCAGAAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGAGTCATGCAGATGGTGGCATGTCTCCCGGAAGGACGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCTGGTCTCGGCGGCTCCGCTCCTGGGGGAGGAGCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGGGGGA	CTCCATCAATGATACGGAGATACGGACCA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGCGCGAG	GCGCTTGCGCGGCTGCTCGCCGGCATCGCGTTTCAA
TCCCCTTCATGGCGGGGCTTTTGTTTTTTTCAGGCGGAGATGGTGACGCCTGAATCGTTTATCGCGGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCTCCGCTCCTGGGGGAGGAGCGGAGCCGACGCGTGATGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGACGCCTGCGCGCGCCTCCAGCGCTGGGGAACGGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATCCCCCCGCCGGAGGCGGGGGAAGGAGGGAGCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGAGGGAGCATGTGGTGGAGGAGATGGTTCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGATGAGGAGGCCCTCCGCCGGGTCTTCGGCAACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGCTTCCGCTTCCTCCCGAGGAGGAAGCGGCGCTCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGGGGCGCTTCGTTCCCACCGCCGCGTGGCCGTCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCTCGAAACGGAGGCGGCCTGGGCGGCGCACCAGGCCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTCCACCCGCATCCGTGCGATGCGGGCGGAGTTGGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCACGCTGGAGACGCAGAAGGGCAACGCCGACGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGGCACGGCCGACTGCAGCCTGAACGGCACCGCCAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCATTCCTTCCCTCTCCCGAATGGGAGAGGGAAGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGAAAAGTTCGCCGTGTGGAATGGGGATGATTTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGGAGGCCGGCTATCCGTGCGACCCACCCATCCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AACGGGACGCCGCCCACCTGGCGCGGCGGTTGCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCGGGAAGCGGTCGAGCGGATCGAACGGGACGCCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCTTACAGGTCGCCGGGTGGTTTGCCGGCCCCATGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGAGGCGCGGCTCCTTCTCAAACACGTTCCTGAGGCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAGGAGCGGAGCCGCCGCTTGATTGACCAGCTCGC


>NC_009767|67|11|3451397-3451589|PILER-CR
	AAACACCCGGCGGGCGAGGTCGACCTCGACTACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGATGCACGGGGGGCGCATGAATGCGATGGCCAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TAGCCCGCGAAAACAAGCTTCCGAGCGTGGCAGCGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GACCGGCAGACCGAGGAGCACAGCGCCCGCGCCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGCAGCCGAGATGGTGGTCGGGTTGCACCTCGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTGCATCCCACTTCCTCCTGCTGACCCACCCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCCTTGGCGCGCGGGTGCGGGTGAAATAAACCGCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGGGTTCGGCTGGAATTCCTCCCCGAGCACGTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGGGTGGCCCGCGTCGAGCAGGCCGCCGACCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGTGCGTCTGGTCGGGTTCCGCCGTGGCGCCATGCAGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGAGGGATCCATGATCAGAGGTTGGTGGCGTTCGTGGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTGTGGAACGAGCCAAACCCTTGGCGGCAGCGCGGCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCG	CCCAGAGATCGAGCGGGTCATCTGGCTGGACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCG	CCGGGTCGACCGCCGCCGCGCGGCGATGGTACGCTGGGTT
TCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGGTCCCGCCCTCGCCCTCGACTTCGAGGAGACCCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGCGTACGGCTCGCAGCGGCGACGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGATCATCGCCGCCGCCATCGTCGGCCTCGAGAAGCTCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATTATTCTTCCCTTTGCACTGCTCTCGTATCGCAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGGAGGAGCCCACGGCCGAGCCCACCGCCGCCCCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCTGCGCGCAGCACCAGGACCTGGAGGCGACCCGGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CATCGACCTGGACTGCTTCCAGGGCACCATCGAGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCCCGCCGCGTGTCGTGCTTCATTGAAAGGAGCACCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCATCTCGATCGCGGAGGCTGAGCAGGCGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATATTGTATTCTCTGTAATATTCATGAAGAACCCTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCAAGACCATCGACCTGGACTGCTTCCAGGGCACCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAACGGCGGCAACGGCGGCCAGGATGGCGAGAAGGGCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGTATCCATTGCGTCGGTGATGACAGTATCTTTAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCTCGCCGCCGTATGTCCTCTACTTGATGTCTACTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGTGATCACGATGGGCCATGTGAGGTTCAGCGTGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGACCGAGACGCCCAAGCCGACCGAGACGCCCAAGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGCTGCATTTGACATCTTATGGACTCACTTCCGTAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCACCGCCCCCCAGGGCAACGGCGAGGCCCCGACCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCCCCGGCTCCGGCATCCTGGATACGGGGTACTGGGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGTAGAGAGAATTTCTCTAAAGCTCCGGCCACCGCATC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCCCGCCGGAGGCGGGGGAAGGAGGAAGCCATGAGAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGAAGAGGAAGCGGAACTCCGCGCGCGGAAGCGCCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTGGCCGCGGTCGAGCGGGCCGCAGACCAGCGCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCATGTGCGCCAGCTCGAAGTGGAGCTGGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAGGCGCCCACGCCGCGCGCGTGCAGCAGAAGGCGCTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTGCAGCGCTTCGCGTCCCGAGGCGCTGCCCATGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCGGCGGCGGGGCGGGCGGCGGCGCGGCGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACTTCGCCGCATTCCTGGCGAGACGATGGAACGTCTCGTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGCGCCCGCGAGCTGACGGGCTACGCGCTCATCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATCATCCGGTACTGCGTAGCCCCGGACCCGTGCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTCTCAGATCATCCAGTCGGACGTTCGCCTGTCGGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CAAGGCTCAGCAGCTTCGCGATGAGATCAAGCGCCAGAAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGAGTCATGCAGATGGTGGCATGTCTCCCGGAAGGACGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCTGGTCTCGGCGGCTCCGCTCCTGGGGGAGGAGCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGGGGGA	CTCCATCAATGATACGGAGATACGGACCA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGCGCGAG	GCGCTTGCGCGGCTGCTCGCCGGCATCGCGTTTCAA
TCCCCTTCATGGCGGGGCTTTTGTTTTTTTCAGGCGGAGATGGTGACGCCTGAATCGTTTATCGCGGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCTCCGCTCCTGGGGGAGGAGCGGAGCCGACGCGTGATGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGACGCCTGCGCGCGCCTCCAGCGCTGGGGAACGGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATCCCCCCGCCGGAGGCGGGGGAAGGAGGGAGCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGAGGGAGCATGTGGTGGAGGAGATGGTTCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGATGAGGAGGCCCTCCGCCGGGTCTTCGGCAACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGCTTCCGCTTCCTCCCGAGGAGGAAGCGGCGCTCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGGGGCGCTTCGTTCCCACCGCCGCGTGGCCGTCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCTCGAAACGGAGGCGGCCTGGGCGGCGCACCAGGCCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTCCACCCGCATCCGTGCGATGCGGGCGGAGTTGGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCACGCTGGAGACGCAGAAGGGCAACGCCGACGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGGCACGGCCGACTGCAGCCTGAACGGCACCGCCAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCATTCCTTCCCTCTCCCGAATGGGAGAGGGAAGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGAAAAGTTCGCCGTGTGGAATGGGGATGATTTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGGAGGCCGGCTATCCGTGCGACCCACCCATCCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AACGGGACGCCGCCCACCTGGCGCGGCGGTTGCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCGGGAAGCGGTCGAGCGGATCGAACGGGACGCCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCTTACAGGTCGCCGGGTGGTTTGCCGGCCCCATGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGAGGCGCGGCTCCTTCTCAAACACGTTCCTGAGGCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAGGAGCGGAGCCGCCGCTTGATTGACCAGCTCGC


>NC_009767|67|12|3451694-3453071|PILER-CR
	AAACACCCGGCGGGCGAGGTCGACCTCGACTACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCGATGCACGGGGGGCGCATGAATGCGATGGCCAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TAGCCCGCGAAAACAAGCTTCCGAGCGTGGCAGCGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GACCGGCAGACCGAGGAGCACAGCGCCCGCGCCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGCAGCCGAGATGGTGGTCGGGTTGCACCTCGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTGCATCCCACTTCCTCCTGCTGACCCACCCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCCTTGGCGCGCGGGTGCGGGTGAAATAAACCGCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACCGGGTTCGGCTGGAATTCCTCCCCGAGCACGTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGGGTGGCCCGCGTCGAGCAGGCCGCCGACCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGTGCGTCTGGTCGGGTTCCGCCGTGGCGCCATGCAGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGAGGGATCCATGATCAGAGGTTGGTGGCGTTCGTGGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTTGTGGAACGAGCCAAACCCTTGGCGGCAGCGCGGCGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCG	CCCAGAGATCGAGCGGGTCATCTGGCTGGACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCG	CCGGGTCGACCGCCGCCGCGCGGCGATGGTACGCTGGGTT
TCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCCGGTCCCGCCCTCGCCCTCGACTTCGAGGAGACCCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGCGTACGGCTCGCAGCGGCGACGTGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGATCATCGCCGCCGCCATCGTCGGCCTCGAGAAGCTCGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GATTATTCTTCCCTTTGCACTGCTCTCGTATCGCAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGGAGGAGCCCACGGCCGAGCCCACCGCCGCCCCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCTGCGCGCAGCACCAGGACCTGGAGGCGACCCGGCGGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CATCGACCTGGACTGCTTCCAGGGCACCATCGAGCTC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCCCGCCGCGTGTCGTGCTTCATTGAAAGGAGCACCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGATCATCTCGATCGCGGAGGCTGAGCAGGCGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTCGCAGTGGTAAACGCGGTGACCCAGAGGTAGACCT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATGGTCAGGTGCGGTGTAACCACTCGGGACGAAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATATTGTATTCTCTGTAATATTCATGAAGAACCCTCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCAAGACCATCGACCTGGACTGCTTCCAGGGCACCAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAACGGCGGCAACGGCGGCCAGGATGGCGAGAAGGGCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGTATCCATTGCGTCGGTGATGACAGTATCTTTAGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCTCGCCGCCGTATGTCCTCTACTTGATGTCTACTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACGTGATCACGATGGGCCATGTGAGGTTCAGCGTGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGACCGAGACGCCCAAGCCGACCGAGACGCCCAAGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGCTGCATTTGACATCTTATGGACTCACTTCCGTAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCACCGCCCCCCAGGGCAACGGCGAGGCCCCGACCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCCCCGGCTCCGGCATCCTGGATACGGGGTACTGGGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGTAGAGAGAATTTCTCTAAAGCTCCGGCCACCGCATC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCCCCGCCGGAGGCGGGGGAAGGAGGAAGCCATGAGAT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGAAGAGGAAGCGGAACTCCGCGCGCGGAAGCGCCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGTGGCCGCGGTCGAGCGGGCCGCAGACCAGCGCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCATGTGCGCCAGCTCGAAGTGGAGCTGGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GAGGCGCCCACGCCGCGCGCGTGCAGCAGAAGGCGCTG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTGCAGCGCTTCGCGTCCCGAGGCGCTGCCCATGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGCCGGCGGCGGGGCGGGCGGCGGCGCGGCGCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ACTTCGCCGCATTCCTGGCGAGACGATGGAACGTCTCGTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGCGCCCGCGAGCTGACGGGCTACGCGCTCATCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TGATCATCCGGTACTGCGTAGCCCCGGACCCGTGCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GTCTCAGATCATCCAGTCGGACGTTCGCCTGTCGGAC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CAAGGCTCAGCAGCTTCGCGATGAGATCAAGCGCCAGAAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGGAGTCATGCAGATGGTGGCATGTCTCCCGGAAGGACGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTCTGGTCTCGGCGGCTCCGCTCCTGGGGGAGGAGCGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCGGGGGA	CTCCATCAATGATACGGAGATACGGACCA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGGCGCGAG	GCGCTTGCGCGGCTGCTCGCCGGCATCGCGTTTCAA
TCCCCTTCATGGCGGGGCTTTTGTTTTTTTCAGGCGGAGATGGTGACGCCTGAATCGTTTATCGCGGGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTTGCTCCGCTCCTGGGGGAGGAGCGGAGCCGACGCGTGATGTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGACGCCTGCGCGCGCCTCCAGCGCTGGGGAACGGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	ATCCCCCCGCCGGAGGCGGGGGAAGGAGGGAGCATGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAAGGAGGGAGCATGTGGTGGAGGAGATGGTTCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGATGAGGAGGCCCTCCGCCGGGTCTTCGGCAACAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGCTTCCGCTTCCTCCCGAGGAGGAAGCGGCGCTCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CTGGGGGCGCTTCGTTCCCACCGCCGCGTGGCCGTCGT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCTCGAAACGGAGGCGGCCTGGGCGGCGCACCAGGCCG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GCCTCCACCCGCATCCGTGCGATGCGGGCGGAGTTGGG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCACGCTGGAGACGCAGAAGGGCAACGCCGACGCCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGGCACGGCCGACTGCAGCCTGAACGGCACCGCCAA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCATTCCTTCCCTCTCCCGAATGGGAGAGGGAAGGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	TCGGCGAAAAGTTCGCCGTGTGGAATGGGGATGATTTT
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCGGGGAGGCCGGCTATCCGTGCGACCCACCCATCCC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AACGGGACGCCGCCCACCTGGCGCGGCGGTTGCTCAG
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CGCGGGAAGCGGTCGAGCGGATCGAACGGGACGCCGA
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	CCTTACAGGTCGCCGGGTGGTTTGCCGGCCCCATGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	AAGAGGCGCGGCTCCTTCTCAAACACGTTCCTGAGGCGCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT	GGGAGGAGCGGAGCCGCCGCTTGATTGACCAGCTCGC
GTTTCAATCCCCTTCATGGCGGGGCTTTTGTTTTTTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121176.1|3463968_3464346_-|hypothetical-protein	csx15	cd09766_csx15_CAS-I:CAS-III	gnl|CDD|187735
NC_009767.1|WP_012121165.1|3441819_3443862_+|hypothetical-protein	unknown	unknown	gnl|CDD|379070
NC_009767.1|WP_157042837.1|3464342_3464996_-|hypothetical-protein	csx1	cd09747_csx1_CAS-III	gnl|CDD|187878
NC_009767.1|WP_012121164.1|3440736_3441699_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|119321
NC_009767.1|WP_012121166.1|3443933_3446312_+|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|133475
NC_009767.1|WP_157042836.1|3462557_3463004_-|reverse-transcriptase-like-protein	unknown	unknown	gnl|CDD|260011
NC_009767.1|WP_012121171.1|3458386_3459385_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187766
NC_009767.1|WP_012121162.1|3438257_3439775_+|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224053
NC_009767.1|WP_012121169.1|3455477_3455753_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NC_009767.1|WP_012121161.1|3437134_3438253_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380654
NC_009767.1|WP_012121173.1|3461082_3462543_-|hypothetical-protein	unknown	unknown	gnl|CDD|224117
NC_009767.1|WP_012121172.1|3459723_3461067_-|RNA-dependent-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_009767.1|WP_157042648.1|3432371_3434471_+|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|226702
NC_009767.1|WP_012121167.1|3446330_3447101_+|hypothetical-protein	unknown	unknown	gnl|CDD|274008
NC_009767.1|WP_041330807.1|3453229_3455278_+|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_009767.1|WP_012121170.1|3455932_3458266_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NC_009767.1|WP_012121160.1|3434894_3436808_+|response-regulator	unknown	unknown	gnl|CDD|237425
NC_009767.1|WP_012121159.1|3434436_3434880_+|response-regulator	unknown	unknown	gnl|CDD|381108
NC_009767.1|WP_012121175.1|3463003_3463192_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121163.1|3439771_3440740_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|119321

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012121176.1|3463968_3464346_-|hypothetical-protein	csx15	cd09766_csx15_CAS-I:CAS-III	2.6e-42	137.4	0.0
NC_009767.1|WP_041330807.1|3453229_3455278_+|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	1.1e-17	59.3	2.4
NC_009767.1|WP_012121171.1|3458386_3459385_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1.3e-89	295.1	0.0
NC_009767.1|WP_012121169.1|3455477_3455753_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	5.2e-29	95.1	0.3
NC_009767.1|WP_157042837.1|3464342_3464996_-|hypothetical-protein	csx1	cd09747_csx1_CAS-III	1.8e-11	38.2	0.0
NC_009767.1|WP_012121172.1|3459723_3461067_-|RNA-dependent-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	8.6e-39	128.1	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121176.1|3463968_3464346_-|hypothetical-protein	gnl|CDD|187735	cd09766, Csx15_I-U, CRISPR/Cas system-associated protein Csx15. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small protein loosely associated with CRISPR/Cas systems; some are fused to AAA ATPase domain, also known as TTE2665 family.	1.18991e-47
NC_009767.1|WP_012121165.1|3441819_3443862_+|hypothetical-protein	gnl|CDD|379070	pfam13200, DUF4015, Putative glycosyl hydrolase domain. This domain is related to other known glycosyl hydrolases suggesting this domain is also involved in carbohydrate break down.	1.82597e-143
NC_009767.1|WP_012121164.1|3440736_3441699_+|ABC-transporter-permease	gnl|CDD|119321	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group also contains E. coli RbsC, AlsC, and MglC, which are TMs of other monosaccharide transporters, the ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also be involved in low affinity ribose transport. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Proteins in this subgroup have a single TM which homodimerizes to generate the transmembrane pore.	4.01816e-63
NC_009767.1|WP_012121166.1|3443933_3446312_+|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	8.97606e-15
NC_009767.1|WP_157042836.1|3462557_3463004_-|reverse-transcriptase-like-protein	gnl|CDD|260011	cd09279, RNase_HI_like, RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD) residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Most archaeal genomes contain only type 2 RNase H (RNase HII); however, a few contain RNase HI as well. Although archaeal RNase HI sequences conserve the DEDD active-site motif, they lack other common features important for catalytic function, such as the basic protrusion region. Archaeal RNase HI homologs are more closely related to retroviral RNase HI than bacterial and eukaryotic type I RNase H in enzymatic properties.	1.20135e-36
NC_009767.1|WP_012121171.1|3458386_3459385_-|CRISPR-associated-endonuclease-Cas1	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.36417e-101
NC_009767.1|WP_012121162.1|3438257_3439775_+|sugar-ABC-transporter-ATP-binding-protein	gnl|CDD|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NC_009767.1|WP_012121169.1|3455477_3455753_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.5909e-30
NC_009767.1|WP_012121161.1|3437134_3438253_+|ABC-transporter-substrate-binding-protein	gnl|CDD|380654	cd19999, PBP1_ABC_sugar_binding-like, monosaccharide ABC transporter substrate binding protein such as CUT2. Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type 1 periplasmic binding protein superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their substrate specificity is not known in detail.	1.75568e-129
NC_009767.1|WP_012121173.1|3461082_3462543_-|hypothetical-protein	gnl|CDD|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	8.9591e-06
NC_009767.1|WP_012121172.1|3459723_3461067_-|RNA-dependent-DNA-polymerase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	3.93401e-58
NC_009767.1|WP_157042648.1|3432371_3434471_+|PAS-domain-S-box-protein	gnl|CDD|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	5.36499e-53
NC_009767.1|WP_012121167.1|3446330_3447101_+|hypothetical-protein	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.00012313
NC_009767.1|WP_041330807.1|3453229_3455278_+|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	6.53169e-16
NC_009767.1|WP_012121170.1|3455932_3458266_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	6.95233e-10
NC_009767.1|WP_012121160.1|3434894_3436808_+|response-regulator	gnl|CDD|237425	PRK13557, PRK13557, histidine kinase; Provisional.	6.87679e-107
NC_009767.1|WP_012121159.1|3434436_3434880_+|response-regulator	gnl|CDD|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	9.03846e-62
NC_009767.1|WP_157042837.1|3464342_3464996_-|hypothetical-protein	gnl|CDD|187878	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as Cas02710 family.	1.73375e-07
NC_009767.1|WP_012121163.1|3439771_3440740_+|ABC-transporter-permease	gnl|CDD|119321	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group also contains E. coli RbsC, AlsC, and MglC, which are TMs of other monosaccharide transporters, the ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also be involved in low affinity ribose transport. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Proteins in this subgroup have a single TM which homodimerizes to generate the transmembrane pore.	6.40826e-65

Protein sequences

>NC_009767.1|WP_012121167.1|3446330_3447101_+|hypothetical-protein
MTNASESAPATPPASPPTRRGSGFFARLLAAFLVILITTTITLLATGATLLWLGFTPSTPIELTAAKAQVATLEARNATLISRADAVATDVADLARRASDDREALSDIRSAIDDVRVLREQVREQLTAIVGQNATLVADARASRDQVIAFATAEAGRATLLQELDRRSQRIERFLQRLSDIAGDAALDLRGPTPMLPVVAPTATMPVEPTAPPTPITTPTPTLTVTTTPEVTATETATPSSVATTTPTPRSATATP
>NC_009767.1|WP_012121166.1|3443933_3446312_+|N-acetylmuramoyl-L-alanine-amidase
MHRLVVTIALIGMMIGITPSQAFAQVPVQSGRIVFSTQADWQRGTRTDVQIITNADGELRLERGATRGTFVSEPIALTTTLNAAGVVWHADVPPGTTLTLELRGGPAPDQPGPWQPLTAGELRARSTPDAFAIEGVRPLPSDTRVLQFRATFSTTVPNASPILSDVSISYFDTSAGPPRAINAVPAVGGPATLTVPPKLFPRTSWAGGNPRAYRGPREAPQGIVLHQIGADALDDSLPFLRALAVYHEQTLGLNDTVYHYIIGRDGAIFEGRSGGPTASVAELSGGAAVHIALIGEGAPPAAQFDALRALLAWLCDAYRLEPSGQRVITLNGSSVVGPTIAAHSDLAPSAGDPSNALRDALPQIRQSVSAAMVRSRWFFAEGNPRDYEERLAVLNPGSEPATVRFIIVRQPGVEVIRETTVAPGARANLVINQVFNDTSDAPAIVESNAPIIAERFMNFGADLSLQPGVAHPSRVWYFAEGSTEGDKRTFLVLFNPQSEPVGARVLLITNDGTTFVYPPFDSEPVVLLPRQRTVIVMGDLLPNASFGMRVTASQPIVAERTMIFGPGSTLTSGGMHISPGMTELSREWHFAEGTTAPPFRMSLLVLNPNGDRANVTVRFLTPDGTSLARRYAIPPLARLSIDVNDVVPELGVATTIIADRPVAAERALYWRNDAAGTAGPGVMAPAYSWRFADGRTGGDYQQYLLISNPSRSQARIDVAFILADGSRASRSLVMPAGSRYTMAVHELFPDQTIISATVRATQPVVVERSIYAGPPAATTNRGGETSPGVPGD
>NC_009767.1|WP_012121165.1|3441819_3443862_+|hypothetical-protein
MRWIRGCALAAVSILALIVAACSQPAVPLTGTIADAYTGKPVVATLTIGDLQVTTDANGVYQIDRWSARDVIKVVASGYEPIEINLSTLPNLERPSPPAVTLEPVQVRPNTLSGVITDLYTGMPVAGALVQASETISATTDAEGRYVLTGVPETFRVTITADGYAPVVSDVARTTLFDAAIRPDTLRGAVTDGYTGRPIAGASVALGDLRATTDSNGQYVLRGVPEKGTMTISARGYARLDQPVERVTTLDVALRPDTLSGTLIDAQSRQPIRNATIIATLNLQSSDVAMTRIDNSSDGSFTLEGIPEQGYLQVLAPGYRKAVIELRPGSVPATIELEPFYSKALYVTAAVASRWNLLMKYFDIIDATELNAIVIDIKSDLRDDLGLVYYDSQVPIVRELGTFKPYMDLRAILNEARRRGIYTIARVHMFSHDNVLAEAKPEWAAKDRTTGGIFYDYPAPSIRYAWLDPWNENVWDYNIQLSVEAALLGFDEIQYDYIRFPSLEFSPTDKDRLLLSREGTPEERWANITEVLKRSHRAINGAGAFFSVDVFGYTAFGPSRLLGQNLSMMAEYTDYISPMIYPSHFNPGEFGFDNPAKYPYEVIQKSMSAAFKQVEGKRALLRPWLQDFTLIWVPKELLVEYTPAEVRAQIRAVEEFDASAGWILYDSTNVYHVEALKPAE
>NC_009767.1|WP_012121164.1|3440736_3441699_+|ABC-transporter-permease
MTRRTISPPLAAVLLAVALFLLSGFLPNGFGGNLDVATAQAINIVRLSVFLGIIAAGQTLVIISGGEGIDLSTGAVVTLTAILTYTIVNGSNEQVLPALLAVLVVGGLIGLINGAGVAFLAISPLVMTLGMAGVVSGLILVITQGNVSGAVAPIMTQLIARPVLAGIPGAILIWAVFAALMWLLLERTAFGKHLFAIGTNRTTARLSGIHVTGMIIGAYAISGMLAGLGGFLVVGNTGVVHIRIGDPFLFPSIAAVAVGGTLLTGGKGSYFGTMAGALVLTLITSLLTTMQMQESVRRMVLGATLLAMIAIYGRQRGFRQ
>NC_009767.1|WP_012121163.1|3439771_3440740_+|ABC-transporter-permease
MKPSRWQQVTYRHPYLFALLLLVVAFTANVLLQPNLLDPMTLNSNMRVFLPLILVAIGQAIVMIGGGIDISVGSIVSIVNAILATQIGLSGDLSTAGMVMGMALLVGMGAGALNGLFIAYLRLQPIITTFATSFIYAGLALFILPNPGGGVPSRLTAFYRETIILWLPLAFYVIGLFLLAWGIVRRTRYGRYLYAVGCKADAAYETGVPVRAVQFSTYVISGLMAAFGGIAMTLLTGSGNAQVGDPLTLSSITAAVIGGTPLSGGAGGIAGPIIGAVILGLIRNIISFANVATWWQTFVNAAIIVLALAMPGIINLVRRRNS
>NC_009767.1|WP_012121162.1|3438257_3439775_+|sugar-ABC-transporter-ATP-binding-protein
MPSLLAVRNVAKRYGAIQALTDASLEISAGETLALIGANGSGKSTLSKVINGVVAPDGGQLLLDGRAVRFDSPHAAKDAGISTVFQELSLVPQMTVAENIWLTREPLRRGGLIDQRAERRRTEALLSLFAGTLRTDLTPDTPVSALLPDERQIVEILKAISVNPRLLILDEATASLDSRQVQRLFELIGQWKTQGTAIIFISHRMAEIEQIADRYSVLRNGQTVGEGSMKDATSSDLVALMTPETSGGAIERHRMLPDELATRRIVLQIDGLCTSVLRGVGIQVREGELLGIGGLKGQGQRDLLLAIFGGVPYSGRITLEGKTVHFTHPRQAMNHGVALVPGDRAGEGLLSIRSILENLLVPSWRHYGFPLRMKRARQDAGAIATRLDLKMAGLDAPVSSLSGGNAQKVVIGKWLLRNPRVLLLDDPTKGVDIAAKAEFYRLLSRLCAEGTTVILYSSDDEELIGLSDRVIVMHDGQISAELAGASLTTANLVAASLGVVARETL
>NC_009767.1|WP_012121161.1|3437134_3438253_+|ABC-transporter-substrate-binding-protein
MKRRQFALFAITLMLATLIAACGGTPTTTAPTAAPAPQPTTAPAPEGRKFTIGISNPFISSEYRTQMIQSLIEVNKEYMERGITNELVIESADTDVAGQIQQLQNLINKGVDAILVNPSDVNGLNDTLQEAINKGIIVISVDQELNTPGVYNVGIDQKEWAKISARWLAEKLGGQGNIVLIEGFPGHPANVARMEGVEEVLKEYPNIKVLGRETGKWDEATGQQVMSNFLASFPNLDGYWTQDGMAIGAMQAVMAANPSKWPVLVGEGRCQFLQLWDQRLKEDPNFETIAVANPPGVSPTGLRIAINMLQGKQVDKSKLGGANGLSFVIPVPVIVTKDNFQEVFTTVCKDKPATYLLDGIMTDEEVQQFFVK
>NC_009767.1|WP_012121160.1|3434894_3436808_+|response-regulator
MTGAERVRLLLIEDDELHIELIQRAFEPWQSLFDLTVAHTLREARALLDDDAFRFDLLICDWRLPDGDGLELLDPSDPLPLLVMTGYGNERVAVEAIRAGALDYIVKSEAAFIDLPRVAQHALRQWRAIQTQYRTEQALREIEARYRLITENTSDLIAILDEQHRFRYVSPSAVNLLGRTPEELIGHDAFDDLHPDDMPNSAAYWQEIALRKRTTATFRYRHAGGSWRWFECDIKAVVQDGAPAAIVIARDITARRELEERLLQMQKMDALGRLSGGVAHDFNNLLAVIAGCTELARQSLPDDHPAMLELIEIQHATERASALTRQLLAFAHRQKFDPRPIDLNALIQDMHKLLRRLIREDITLHTRLAPDLWHVRADPGQIEQVLVNLAVNARDAMAVGGALTIATTNVVADEAFERRYPSLKAGEYVCLTVSDTGIGMDEETRRRAFEPFFTTKKPGEGTGLGLATCYGIVTRHGGAIDLASEPGCGTVVTIYLPRASVEGAQASETVDQSAGLDGSETIMLVEDDPAVRSLVARTLRAHGYTVLEASSDQEAIAHAAQDATIHLLLSDHVIPHTSGVALADRLTFLQPRMRVLFMTGYVVEPQQNAHRATDAPVIEKPFTPTELLHRVRALLDA
>NC_009767.1|WP_012121159.1|3434436_3434880_+|response-regulator
MTDTTLRVLLVEDNDDHAELIRRTLNEQQRTPQIVHVSDGESALDYLHRRGAWIDPAQSPRPHVILLDLRLPRVDGLDVLMNIKQSADLRRIPVVVLTTSSAERDVTRAYDAHANSYLVKPFGFEDFRNLMHDVGVYWLMRNTVAHL
>NC_009767.1|WP_157042648.1|3432371_3434471_+|PAS-domain-S-box-protein
MKPLIVRMFQPPRFDDEDQTRIAQTQHLLLLVCLTIALIAATINAALGRSTSTIALLISAGVALIALLLLYARRLRLSIALLLSLFIGLTASLQVIGRGAHDTVTGLYAAVIVIGSLLLDRRAFIGMVAVIMLVIAGIVTAEMYGWTRSPYESEPGDWFDLALILGLTAFAARLLSESLQRSRALARAHAKTLAAQAAALRASEERYRILAANLPDSAVLIFDHDLRFVLSEGPELAATGYSKAALEGRTLYEALPHAFAAQVEGNIRAVLSGRRFSAEIPYEDRIYHYHYVPLIDDSGAVRYGMILARNVTEQRRAQMALQEREAQLRLITENMGDAITQLNAAFTVIYASPSVQRVFGYLPETINGASISVLIHPDDAPGVTMALKRIRDEGASATRIEYRGRSDHCRWLESEIRALYGTNGQFTGAILTTRDVTERKQIEVERERLIAELEQKNAELERFTYTASHDLKSPLITIQGFLGYLERDAQEGNTKRMQDDIRRIGAAVHKMERLLNDLLELSRIGRVSAAPQYVPFNVVVQEALELLVGRIAERQARISVAPEMPVVYGERTRLVEVVQNLVDNALKFCDNQYTPDITIGVLRESQGSSIFFVRDNGIGIEPKYHEQIFGLFNKLDPRSAGTGVGLTIVRRIIEVHGGRIWVESGGPGSGATFYFSLPIAATPVQEVSHDRHDAPGAPG
>NC_009767.1|WP_041330807.1|3453229_3455278_+|WYL-domain-containing-protein
MNRWAALLGEIPSELQRLIARTQRIALPRSCSADERLRRLRAALCSAAVVRSVYASLDAETRAALADLRQQRGGISANELALRYGIVRPLRQMSRDPQPRSVAERLILLGWLLPRPPAPHSPQRYLLAPEVRRWLPKALRFAEEEGTAPVAPPPLALRATVALLLVCAATPLPARADGSLRRVALRVLLPLLSPASLDEVGRVYAFVLPHLYDLGLIGQQRRHCTLAPGAAAFLASPLDIQLSRLIDAWVRSPLPDPWLQRLRLASVGIDWPVLRRRLMRWIEAVPPGRLLHPERLCMSLIDSFGPLADAHTHGFRVVQRSPWRVQSQTRALLTALHEPLHWLGLVAWHDGLVYRPLECTAPDRVWRYSTAGEVLVPFDGIDADALHLAWSGRWIRGEAHGLTWRMMHTPRAQEAAVRQVLLRHAGTPPAAWGAPGSDRAPSLRLVDSVALVADAPEDLEFALRTRSVQRYVQTRLAPGIALVRPEHVAALQRALARQGIAVAGRAPIPAAAPPLDALSPGDCAALLVACAFYRRHAPAGMPLIVDETLESALWRPLSPPLRDAVEEALAYLDAHSCSATEWIDSSGNGHISAVENAPFSGSLRQSAVNEHDLLETLCRAIAQRRTVTIEYDTGGEGRVERRTVRPLELERRHDAWYLRAYCLRRQAERTFRLDRVRAWTIS
>NC_009767.1|WP_012121169.1|3455477_3455753_-|CRISPR-associated-endonuclease-Cas2
MFTIISYDIIDDRRRTKVMKYLKGWGTRVQYSVFECDLDARAFTNVLRELRNLIDPNTDSVRCYRLDEASVRRIQIVGIGVVSRDPTHYFV
>NC_009767.1|WP_012121170.1|3455932_3458266_-|VWA-domain-containing-protein
MVFVRSMRVGMAVMALWVFGVWMVWLPGGAHSATGFPPSSSSAFVSPATGVSESGASTPFRILRPSTRRPVDAGSPFRPSKIVVELIYRGYATKQDITVTIGGKPATIISLVPVRYLIEVQAPQQPAQGRYDLEVTVKGVTVREPGAVTYFGVNNASVILTIDRSGSMGTAKMAAAREAARQFVDLMQAGDGIGVVSFDHVIETPLSLTTIAEAPLPSAFLFSDSMETGASRWIAAPPWGLTSVARNSAQAWTDSPAGNYANNTNSALEIATPIAIPASMTAPALMFWHRYDIENGFDRGEVEISANNGVTWQRLRSFTGTALGWRREMISLDAYRGQTVRVRFRLVTNAFGVRDGWYIDDVALGPAWDDVRARAQAAIDTLNSRGATSIGGGLQRSQHLLTSANPAIPRAIVLLSDGQENTSPYVADVLPPIRDAQTTVHTIGVGQDADQRLMLSIAAQTGGTYNYAPTPDQLARIYNTISGNVSNRQTLATANGSVAPSAVVTQEVTIDPSIAEATFWVGWTNPGIGVALTLQMPSGVSIDPATPTTNSDVVYVSGDTYAYYRVRTPTLTPGVWRMRVSRAASSPGIVAAEALPSEVAGEEHLEPEVENGIAPVDSLREARSVEPDEPAAPPALPASTDEPFVVRATARADLTLGFYPDKTEYLTTEPIIGFVTLADDAPITGANVLLSVQYPGQTTPFTVPMHDDGLHGDGAAGDGVYAVLLLGPREPGTVTFTVTASGSSRQGEPFVRQAELSTFIVANPNPYTLVHLPLVAR
>NC_009767.1|WP_012121171.1|3458386_3459385_-|CRISPR-associated-endonuclease-Cas1
MPTLYIQEQGVMVRKRDNQVLVTRDGQTLHDVPLAKIDQVVLMGRGVQISTALLIDLLERGIPVTLTNQHGSRHYATLTAGPSRFGDLRTGQMQYVNTPSRALELARAIVIVKLTNQRRLLATTGWPAAASAMQQIDAALTAASQAQNVDILRGHEGAAAAAYFGAWRASLPPAWGFGGRAFYPPPDPINAMLSFGYTLALHDVITAVQITGLDPYLGTFHVIETGRPSLALDLLEEFRPVIVDRMVLDIVRTNAIGRERFHRPQERPEAVYLDAEGRAFLVQRYETLLQTKVRLPGGEQTPMRRVILLQAQAIARVLRGEQERYTGFSLNS
>NC_009767.1|WP_012121172.1|3459723_3461067_-|RNA-dependent-DNA-polymerase
MPLFPRYNGPPLLPQICSVENLTLAWRRVRSNIHVARRGRSAGPDAVTLRDFEADWTRQMAQLADELQQGTYRPLPAKRIAIPKASGGERAIAILSVRDRVAQRAVQQVLDPLFDPCFLDCSYGCRPHVGVPEAVARVQRYADQGLGWVVDADIAGYFDAIDQRVLLGLVRQRIDELPVLKLIAQWLEAGMLPGDAALPDEAPATPLQHGEAVLRQVMSWGAERLPPPPTGPYAAAAWEMPGGSVDDGWTVRRSGLESHLWTAMMLARPAIDGARRALPYLQRIGARRLAVVGAVAVGALALSEAVARMHTAQSRGTPQGGALSPLLANIYLHPFDVAMTSQGFRLARFVDDFVIMCATQDEAERALNFAQQQLRVLRLELNAEKTRIASYANGIEFLGASLAPRAKGQRLGEGLVDFADAERVLRDAMRNARQRVRRKIERGKVEG
>NC_009767.1|WP_012121173.1|3461082_3462543_-|hypothetical-protein
MNTDIVSTVQEKVGDAVGEGVSVLKGETGAISGAPLANFHFVTRLATVPRALLRQAFGLVAHLVVPPGTVAVTHLPGGERRIYQPGSYTLVGMQPGAALVQWIDMRRRQMTIGPVEGWSRDKWRVRLWLAVDVEVSDPLKIAAHREPLTALVSAVRNGALCCIEQHTHAALTGAPGDQGGIDAPAAIILERLRNDPALDGLAIINVRVIERQGDERQIEAATAATVAAAQIDEELRVAAARHRAHLQEIEAAAALAAREHNIRLASAAAAAREKLLTQQAEVQQATLAARLQVVMAQIQAQVSEIAREEQLWQAEQMRLQAEWERVQQQLLEAHHTDQQLRLMEGQQGMLRAEGELALAAEEKRNAHALALAEIQQQLAEQRAAQAQAQAERRAAHERDLLELHLRYEQMVAEQMQRLEQWRTEHIQIGVQQKRQHERQMAAIAGTAQIAAAAAAAVVSATGNKSGANPGEVADAGLRALQEFVEA
>NC_009767.1|WP_157042836.1|3462557_3463004_-|reverse-transcriptase-like-protein
MTLLLLQVDGTPGTMPRGIAGLGIVVRSATGAVLAWSCERAPAMSNNEAEYQAVIAGLMFVIRHYPGSRVRCLTDSRIVVDQLAGRHAVRAAVLQPLHMRAQELVRQHGRVTFLAIPRELNRLADALAWEALDGRDWLACAVNRHHAM
>NC_009767.1|WP_012121175.1|3463003_3463192_-|hypothetical-protein
MVWCLAIPACLAAVLALATLFAPPPRIILPSPGHIARGCVATALMLVAAALMGLAVLLQEAQ
>NC_009767.1|WP_012121176.1|3463968_3464346_-|hypothetical-protein
MILINFSHPLTEQQLAQIATFVGATPEVRAIDAQIDRERPLAEVAVELVDRVGLSPDEWQTIPLLINPPALAPLAVAVLSEIHGRAGGFPAMVNVRPVTGTVPTRYEVAEVLNLQALREAARRRR
>NC_009767.1|WP_157042837.1|3464342_3464996_-|hypothetical-protein
MLGNALYELVLLTFGEQPVTLIGIILGAALIFPLLFWGLRRAIETIARRNPIIDVKPAEQIEPHAGLILPVGLSPSGPERAILAWHLRNATLRDCWLIASPEVQNSAKLSDLRQWLIEQNVDVHTAPIANATSLEDIFRAAMQALREAQASSRAQPVAVDITGGTAVMSVGLALAARNWNAPLQYYPAVYGRDGSLLINSATAPKQIVFASTGGTTP

Crispr_ID: NC_009767_68

• CRISPR_ID: NC_009767_68
• CRISPR_location: 3463379-3463477
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: RT,cas1,cas2,WYL,csx15,csx1

Consensus repeat of NC_009767_68

Consensus_repeat	Method
AACGTTCCCGGCAGAGACGTTGC	CRISPRCasFinder

spacers of NC_009767_68

>68.1|3463402|53|NC_009767|CRISPRCasFinder
ACTGCAATGTCTCTGATCGTCACATGGGGTCAGGTTGCACGTTCCCGGCGTCA

CRISPR arrays and Neighbor proteins around NC_009767_68

CRISPR arrays

The CRISPR arrays of NC_009767_68

>merge|NC_009767|68|3463379-3463477|CRISPRCasFinder
AACGTTCCCGGCAGAGACGTTGCACTGCAATGTCTCTGATCGTCACATGGGGTCAGGTTGCACGTTCCCGGCGTCAAACGTTTCCGGCAGAGACGTTGC

>NC_009767|68|59|3463379-3463477|CRISPRCasFinder
AACGTTCCCGGCAGAGACGTTGC	ACTGCAATGTCTCTGATCGTCACATGGGGTCAGGTTGCACGTTCCCGGCGTCA
AACGTTTCCGGCAGAGACGTTGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121181.1|3469716_3470457_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_009767.1|WP_157042836.1|3462557_3463004_-|reverse-transcriptase-like-protein	unknown	unknown	gnl|CDD|260011
NC_009767.1|WP_012121166.1|3443933_3446312_+|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|133475
NC_009767.1|WP_012121171.1|3458386_3459385_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187766
NC_009767.1|WP_157042837.1|3464342_3464996_-|hypothetical-protein	csx1	cd09747_csx1_CAS-III	gnl|CDD|187878
NC_009767.1|WP_012121169.1|3455477_3455753_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NC_009767.1|WP_012121179.1|3466290_3467688_-|TIGR02710-family-CRISPR-associated-protein	csx1	pfam09670_csx1_CAS-III	gnl|CDD|187878
NC_009767.1|WP_012121173.1|3461082_3462543_-|hypothetical-protein	unknown	unknown	gnl|CDD|224117
NC_009767.1|WP_012121172.1|3459723_3461067_-|RNA-dependent-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_009767.1|WP_012121178.1|3465082_3466129_-|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_009767.1|WP_012121180.1|3467894_3468467_-|nucleoside-deaminase	unknown	unknown	gnl|CDD|238612
NC_009767.1|WP_012121176.1|3463968_3464346_-|hypothetical-protein	csx15	cd09766_csx15_CAS-I:CAS-III	gnl|CDD|187735
NC_009767.1|WP_012121167.1|3446330_3447101_+|hypothetical-protein	unknown	unknown	gnl|CDD|274008
NC_009767.1|WP_041330807.1|3453229_3455278_+|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_009767.1|WP_012121170.1|3455932_3458266_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NC_009767.1|WP_012121183.1|3471206_3472370_-|glycosyltransferase-family-1-protein	unknown	unknown	gnl|CDD|340842
NC_009767.1|WP_012121185.1|3473525_3475928_+|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl|CDD|381604
NC_009767.1|WP_012121182.1|3470460_3471210_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121184.1|3472415_3473360_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009767.1|WP_012121175.1|3463003_3463192_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012121178.1|3465082_3466129_-|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	2.7e-23	77.6	1.7
NC_009767.1|WP_012121176.1|3463968_3464346_-|hypothetical-protein	csx15	cd09766_csx15_CAS-I:CAS-III	2.6e-42	137.4	0.0
NC_009767.1|WP_041330807.1|3453229_3455278_+|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	1.1e-17	59.3	2.4
NC_009767.1|WP_012121171.1|3458386_3459385_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1.3e-89	295.1	0.0
NC_009767.1|WP_012121169.1|3455477_3455753_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	5.2e-29	95.1	0.3
NC_009767.1|WP_012121179.1|3466290_3467688_-|TIGR02710-family-CRISPR-associated-protein	csx1	pfam09670_csx1_CAS-III	1.8e-149	492.5	0.6
NC_009767.1|WP_157042837.1|3464342_3464996_-|hypothetical-protein	csx1	cd09747_csx1_CAS-III	1.8e-11	38.2	0.0
NC_009767.1|WP_012121172.1|3459723_3461067_-|RNA-dependent-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	8.6e-39	128.1	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121181.1|3469716_3470457_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.49869e-16
NC_009767.1|WP_157042836.1|3462557_3463004_-|reverse-transcriptase-like-protein	gnl|CDD|260011	cd09279, RNase_HI_like, RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD) residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Most archaeal genomes contain only type 2 RNase H (RNase HII); however, a few contain RNase HI as well. Although archaeal RNase HI sequences conserve the DEDD active-site motif, they lack other common features important for catalytic function, such as the basic protrusion region. Archaeal RNase HI homologs are more closely related to retroviral RNase HI than bacterial and eukaryotic type I RNase H in enzymatic properties.	1.20135e-36
NC_009767.1|WP_012121166.1|3443933_3446312_+|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	8.97606e-15
NC_009767.1|WP_012121171.1|3458386_3459385_-|CRISPR-associated-endonuclease-Cas1	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.36417e-101
NC_009767.1|WP_012121183.1|3471206_3472370_-|glycosyltransferase-family-1-protein	gnl|CDD|340842	cd03814, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases and includes a sequence annotated as alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase from Bacillus halodurans. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.	7.21565e-101
NC_009767.1|WP_012121169.1|3455477_3455753_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.5909e-30
NC_009767.1|WP_012121179.1|3466290_3467688_-|TIGR02710-family-CRISPR-associated-protein	gnl|CDD|187878	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as Cas02710 family.	1.81166e-154
NC_009767.1|WP_012121173.1|3461082_3462543_-|hypothetical-protein	gnl|CDD|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	8.9591e-06
NC_009767.1|WP_012121172.1|3459723_3461067_-|RNA-dependent-DNA-polymerase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	3.93401e-58
NC_009767.1|WP_012121178.1|3465082_3466129_-|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	1.05637e-18
NC_009767.1|WP_012121180.1|3467894_3468467_-|nucleoside-deaminase	gnl|CDD|238612	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a water molecule to form a hydroxide ion that performs a nucleophilic attack on the substrate. The functional enzyme is a homodimer. Cytosine deaminase catalyzes the deamination of cytosine to uracil and ammonia and is a member of the pyrimidine salvage pathway. Cytosine deaminase is found in bacteria and fungi but is not present in mammals; for this reason, the enzyme is currently of interest for antimicrobial drug design and gene therapy applications against tumors. Some members of this family are tRNA-specific adenosine deaminases that generate inosine at the first position of their anticodon (position 34) of specific tRNAs; this modification is thought to enlarge the codon recognition capacity during protein synthesis. Other members of the family are guanine deaminases which deaminate guanine to xanthine as part of the utilization of guanine as a nitrogen source.	3.53635e-34
NC_009767.1|WP_012121176.1|3463968_3464346_-|hypothetical-protein	gnl|CDD|187735	cd09766, Csx15_I-U, CRISPR/Cas system-associated protein Csx15. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small protein loosely associated with CRISPR/Cas systems; some are fused to AAA ATPase domain, also known as TTE2665 family.	1.18991e-47
NC_009767.1|WP_012121167.1|3446330_3447101_+|hypothetical-protein	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.00012313
NC_009767.1|WP_041330807.1|3453229_3455278_+|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	6.53169e-16
NC_009767.1|WP_012121170.1|3455932_3458266_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	6.95233e-10
NC_009767.1|WP_012121185.1|3473525_3475928_+|transglycosylase-SLT-domain-containing-protein	gnl|CDD|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	2.82711e-55
NC_009767.1|WP_012121184.1|3472415_3473360_-|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	8.66902e-32
NC_009767.1|WP_157042837.1|3464342_3464996_-|hypothetical-protein	gnl|CDD|187878	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as Cas02710 family.	1.73375e-07

Protein sequences

>NC_009767.1|WP_012121175.1|3463003_3463192_-|hypothetical-protein
MVWCLAIPACLAAVLALATLFAPPPRIILPSPGHIARGCVATALMLVAAALMGLAVLLQEAQ
>NC_009767.1|WP_157042836.1|3462557_3463004_-|reverse-transcriptase-like-protein
MTLLLLQVDGTPGTMPRGIAGLGIVVRSATGAVLAWSCERAPAMSNNEAEYQAVIAGLMFVIRHYPGSRVRCLTDSRIVVDQLAGRHAVRAAVLQPLHMRAQELVRQHGRVTFLAIPRELNRLADALAWEALDGRDWLACAVNRHHAM
>NC_009767.1|WP_012121173.1|3461082_3462543_-|hypothetical-protein
MNTDIVSTVQEKVGDAVGEGVSVLKGETGAISGAPLANFHFVTRLATVPRALLRQAFGLVAHLVVPPGTVAVTHLPGGERRIYQPGSYTLVGMQPGAALVQWIDMRRRQMTIGPVEGWSRDKWRVRLWLAVDVEVSDPLKIAAHREPLTALVSAVRNGALCCIEQHTHAALTGAPGDQGGIDAPAAIILERLRNDPALDGLAIINVRVIERQGDERQIEAATAATVAAAQIDEELRVAAARHRAHLQEIEAAAALAAREHNIRLASAAAAAREKLLTQQAEVQQATLAARLQVVMAQIQAQVSEIAREEQLWQAEQMRLQAEWERVQQQLLEAHHTDQQLRLMEGQQGMLRAEGELALAAEEKRNAHALALAEIQQQLAEQRAAQAQAQAERRAAHERDLLELHLRYEQMVAEQMQRLEQWRTEHIQIGVQQKRQHERQMAAIAGTAQIAAAAAAAVVSATGNKSGANPGEVADAGLRALQEFVEA
>NC_009767.1|WP_012121172.1|3459723_3461067_-|RNA-dependent-DNA-polymerase
MPLFPRYNGPPLLPQICSVENLTLAWRRVRSNIHVARRGRSAGPDAVTLRDFEADWTRQMAQLADELQQGTYRPLPAKRIAIPKASGGERAIAILSVRDRVAQRAVQQVLDPLFDPCFLDCSYGCRPHVGVPEAVARVQRYADQGLGWVVDADIAGYFDAIDQRVLLGLVRQRIDELPVLKLIAQWLEAGMLPGDAALPDEAPATPLQHGEAVLRQVMSWGAERLPPPPTGPYAAAAWEMPGGSVDDGWTVRRSGLESHLWTAMMLARPAIDGARRALPYLQRIGARRLAVVGAVAVGALALSEAVARMHTAQSRGTPQGGALSPLLANIYLHPFDVAMTSQGFRLARFVDDFVIMCATQDEAERALNFAQQQLRVLRLELNAEKTRIASYANGIEFLGASLAPRAKGQRLGEGLVDFADAERVLRDAMRNARQRVRRKIERGKVEG
>NC_009767.1|WP_012121171.1|3458386_3459385_-|CRISPR-associated-endonuclease-Cas1
MPTLYIQEQGVMVRKRDNQVLVTRDGQTLHDVPLAKIDQVVLMGRGVQISTALLIDLLERGIPVTLTNQHGSRHYATLTAGPSRFGDLRTGQMQYVNTPSRALELARAIVIVKLTNQRRLLATTGWPAAASAMQQIDAALTAASQAQNVDILRGHEGAAAAAYFGAWRASLPPAWGFGGRAFYPPPDPINAMLSFGYTLALHDVITAVQITGLDPYLGTFHVIETGRPSLALDLLEEFRPVIVDRMVLDIVRTNAIGRERFHRPQERPEAVYLDAEGRAFLVQRYETLLQTKVRLPGGEQTPMRRVILLQAQAIARVLRGEQERYTGFSLNS
>NC_009767.1|WP_012121170.1|3455932_3458266_-|VWA-domain-containing-protein
MVFVRSMRVGMAVMALWVFGVWMVWLPGGAHSATGFPPSSSSAFVSPATGVSESGASTPFRILRPSTRRPVDAGSPFRPSKIVVELIYRGYATKQDITVTIGGKPATIISLVPVRYLIEVQAPQQPAQGRYDLEVTVKGVTVREPGAVTYFGVNNASVILTIDRSGSMGTAKMAAAREAARQFVDLMQAGDGIGVVSFDHVIETPLSLTTIAEAPLPSAFLFSDSMETGASRWIAAPPWGLTSVARNSAQAWTDSPAGNYANNTNSALEIATPIAIPASMTAPALMFWHRYDIENGFDRGEVEISANNGVTWQRLRSFTGTALGWRREMISLDAYRGQTVRVRFRLVTNAFGVRDGWYIDDVALGPAWDDVRARAQAAIDTLNSRGATSIGGGLQRSQHLLTSANPAIPRAIVLLSDGQENTSPYVADVLPPIRDAQTTVHTIGVGQDADQRLMLSIAAQTGGTYNYAPTPDQLARIYNTISGNVSNRQTLATANGSVAPSAVVTQEVTIDPSIAEATFWVGWTNPGIGVALTLQMPSGVSIDPATPTTNSDVVYVSGDTYAYYRVRTPTLTPGVWRMRVSRAASSPGIVAAEALPSEVAGEEHLEPEVENGIAPVDSLREARSVEPDEPAAPPALPASTDEPFVVRATARADLTLGFYPDKTEYLTTEPIIGFVTLADDAPITGANVLLSVQYPGQTTPFTVPMHDDGLHGDGAAGDGVYAVLLLGPREPGTVTFTVTASGSSRQGEPFVRQAELSTFIVANPNPYTLVHLPLVAR
>NC_009767.1|WP_012121169.1|3455477_3455753_-|CRISPR-associated-endonuclease-Cas2
MFTIISYDIIDDRRRTKVMKYLKGWGTRVQYSVFECDLDARAFTNVLRELRNLIDPNTDSVRCYRLDEASVRRIQIVGIGVVSRDPTHYFV
>NC_009767.1|WP_041330807.1|3453229_3455278_+|WYL-domain-containing-protein
MNRWAALLGEIPSELQRLIARTQRIALPRSCSADERLRRLRAALCSAAVVRSVYASLDAETRAALADLRQQRGGISANELALRYGIVRPLRQMSRDPQPRSVAERLILLGWLLPRPPAPHSPQRYLLAPEVRRWLPKALRFAEEEGTAPVAPPPLALRATVALLLVCAATPLPARADGSLRRVALRVLLPLLSPASLDEVGRVYAFVLPHLYDLGLIGQQRRHCTLAPGAAAFLASPLDIQLSRLIDAWVRSPLPDPWLQRLRLASVGIDWPVLRRRLMRWIEAVPPGRLLHPERLCMSLIDSFGPLADAHTHGFRVVQRSPWRVQSQTRALLTALHEPLHWLGLVAWHDGLVYRPLECTAPDRVWRYSTAGEVLVPFDGIDADALHLAWSGRWIRGEAHGLTWRMMHTPRAQEAAVRQVLLRHAGTPPAAWGAPGSDRAPSLRLVDSVALVADAPEDLEFALRTRSVQRYVQTRLAPGIALVRPEHVAALQRALARQGIAVAGRAPIPAAAPPLDALSPGDCAALLVACAFYRRHAPAGMPLIVDETLESALWRPLSPPLRDAVEEALAYLDAHSCSATEWIDSSGNGHISAVENAPFSGSLRQSAVNEHDLLETLCRAIAQRRTVTIEYDTGGEGRVERRTVRPLELERRHDAWYLRAYCLRRQAERTFRLDRVRAWTIS
>NC_009767.1|WP_012121167.1|3446330_3447101_+|hypothetical-protein
MTNASESAPATPPASPPTRRGSGFFARLLAAFLVILITTTITLLATGATLLWLGFTPSTPIELTAAKAQVATLEARNATLISRADAVATDVADLARRASDDREALSDIRSAIDDVRVLREQVREQLTAIVGQNATLVADARASRDQVIAFATAEAGRATLLQELDRRSQRIERFLQRLSDIAGDAALDLRGPTPMLPVVAPTATMPVEPTAPPTPITTPTPTLTVTTTPEVTATETATPSSVATTTPTPRSATATP
>NC_009767.1|WP_012121166.1|3443933_3446312_+|N-acetylmuramoyl-L-alanine-amidase
MHRLVVTIALIGMMIGITPSQAFAQVPVQSGRIVFSTQADWQRGTRTDVQIITNADGELRLERGATRGTFVSEPIALTTTLNAAGVVWHADVPPGTTLTLELRGGPAPDQPGPWQPLTAGELRARSTPDAFAIEGVRPLPSDTRVLQFRATFSTTVPNASPILSDVSISYFDTSAGPPRAINAVPAVGGPATLTVPPKLFPRTSWAGGNPRAYRGPREAPQGIVLHQIGADALDDSLPFLRALAVYHEQTLGLNDTVYHYIIGRDGAIFEGRSGGPTASVAELSGGAAVHIALIGEGAPPAAQFDALRALLAWLCDAYRLEPSGQRVITLNGSSVVGPTIAAHSDLAPSAGDPSNALRDALPQIRQSVSAAMVRSRWFFAEGNPRDYEERLAVLNPGSEPATVRFIIVRQPGVEVIRETTVAPGARANLVINQVFNDTSDAPAIVESNAPIIAERFMNFGADLSLQPGVAHPSRVWYFAEGSTEGDKRTFLVLFNPQSEPVGARVLLITNDGTTFVYPPFDSEPVVLLPRQRTVIVMGDLLPNASFGMRVTASQPIVAERTMIFGPGSTLTSGGMHISPGMTELSREWHFAEGTTAPPFRMSLLVLNPNGDRANVTVRFLTPDGTSLARRYAIPPLARLSIDVNDVVPELGVATTIIADRPVAAERALYWRNDAAGTAGPGVMAPAYSWRFADGRTGGDYQQYLLISNPSRSQARIDVAFILADGSRASRSLVMPAGSRYTMAVHELFPDQTIISATVRATQPVVVERSIYAGPPAATTNRGGETSPGVPGD
>NC_009767.1|WP_012121176.1|3463968_3464346_-|hypothetical-protein
MILINFSHPLTEQQLAQIATFVGATPEVRAIDAQIDRERPLAEVAVELVDRVGLSPDEWQTIPLLINPPALAPLAVAVLSEIHGRAGGFPAMVNVRPVTGTVPTRYEVAEVLNLQALREAARRRR
>NC_009767.1|WP_157042837.1|3464342_3464996_-|hypothetical-protein
MLGNALYELVLLTFGEQPVTLIGIILGAALIFPLLFWGLRRAIETIARRNPIIDVKPAEQIEPHAGLILPVGLSPSGPERAILAWHLRNATLRDCWLIASPEVQNSAKLSDLRQWLIEQNVDVHTAPIANATSLEDIFRAAMQALREAQASSRAQPVAVDITGGTAVMSVGLALAARNWNAPLQYYPAVYGRDGSLLINSATAPKQIVFASTGGTTP
>NC_009767.1|WP_012121178.1|3465082_3466129_-|WYL-domain-containing-protein
MTEQRRRGGDKRSSLLIHRRRLFLIRRLIRGSATAEELINEANTTFTDVPEGIYPADASAALRRDIAALRVEYGCAIERDDDGVYTLKSPGSLALIDLPDHEIEAVAFLLDVYRESDLPIAAPIGTFLARIGALMPEDRQNRLNSLTASPKVERPYAPIEGVTEMMRALKGVLRKREVEFDYRSPHTPDGAALHHRVAPLEFVYREGHTYLDAFCLASDVPELVGQFVFYRLNRIVASSLRRLPQALRRDYRRPTYALRYRLAPAVARQRDVAKWFPETEIDYAADGSATVTAVTNDLWRAHQILMRYREHCRVIEPAPLIEMMRASIERMAALYLTDAVMQIHEDIR
>NC_009767.1|WP_012121179.1|3466290_3467688_-|TIGR02710-family-CRISPR-associated-protein
MAQPTEALPFPDMFQRFRSTIGDHAFRGLVLVGTLQADTPSLLIAGLNPERVAFLLTDQSREKGLVAQCRARLEQVADQVSLRCLPDAWFCPNGDHSNVLSVYTGLRAVLDRWNDLERHEIAVDLTGGKATMTVGLAKAAHVLRLASVYVDSDYADNRPIPGTQRLATPEDPYLVFGDLEAAEACRLHNHHDYAGAERVFRDLARRVPDKQDYAIYADLSAAYLAWDSFVPQPAAMALDRVLAHNVLPDALQARRVTLEAQRQALTQLTAINQCLTNRHSQAADALAALNDLDQVLALLGSLHGAALRRAAQERYDVAALMRYRCLELLSQHRLATYSVWTAAPSFDAALQRVPDLNQQYRQAQCEQGFRKVYDLPERSIALFEGYMLLQALDDPLVREWDIGLVRQRSYVRNTSILAHGFRAISRHEYEQFADIVENVLDRFFTIAQLPRYEWEQTYHFVTLAV
>NC_009767.1|WP_012121180.1|3467894_3468467_-|nucleoside-deaminase
MNRHVSTLTITLPDWLNARLTAPIRLPSDEDRMRFVIDLARTNIAQGTGGPFAAAVFRSDDGVLVSAGVNSVTRLTNAVLHAEVVALMFAQARVGAYTLRAANTSYDLVTSCEPCAMCLGAILWSGVQRLVCGATRDDAERIGFDEGPVFPESYAYLERRGITVVRQVLRAEAANVLDHYRRSGGVVYNG
>NC_009767.1|WP_012121181.1|3469716_3470457_+|class-I-SAM-dependent-methyltransferase
MNNAEGWSERDSAVFLDLGRYAVPNREDQIRMIGSLIPPRATPWLALDLCCGEGLLCEEVLTRHAAASIVGMDASPTMLERAATRLAAYGERFRVRQFDLAARDWRDPETRAHAIVSSLAIHHLSDDGKRQLYHDLFAMLGAGGVLIIADLVQPADERGIALAAAEWDHAVRERALALDGNLAGFEAFEREQWNMYRYPDSDPIPYDTPSRLYDQLRWLEEAGFAGVDVYWVRAGHALFGGSRPVR
>NC_009767.1|WP_012121182.1|3470460_3471210_-|hypothetical-protein
MNETEQVTLVRVRGRLRDIALPSRCPACGAAAGVPLRVERVFVREHRRQGVITHTTRGVTTYHVASISVPFCTACAARHMAERAATESPPSPLRTTVAMYGVVALVALAAALVFAAFIWNEIAGGWRPTLTFAAAIASGCAVFAGWFVVQAVNAWRASTTPPPTSITAAFDFGDRQMRRFEPEWREYRLRNAGYARAFTQANAARLWDDEGPLALRAARFRRIAGSLRIAAAAALIVVFVLLVLQAGAP
>NC_009767.1|WP_012121183.1|3471206_3472370_-|glycosyltransferase-family-1-protein
MRIAIFTETFLPKIDGVVSVLCLALQHLYDKGHQVLLFGPPDMPETYAGHRLVRTGGPRFWLYPELRINLPSGKIVRELRAFQPHLVHVVNPAFLGPTGITLAKMFNLPLVASAHMDITSYTTHYVGAWGVPIAWWLFRTGHNFADLNLVPSSAMLQQVRERGYRRVRWWHRGVDTERFRPDLRSDAMRARLSGGRPDDFLAVYVGRITREKNVHLLRDAICGIEGVRLALVGGGPELEQMQSHFAGTGTVFTGYLRGDDVAAAYASADVLVFPSTSETFGMAPLEAMACGLPVVGSMTGGLVDTLRDGVNALVYDPNDPMQMRERVQSLRDSPDLHARLRQGALAHARSRRWQATMDQLVGYYELGIRYHRQAQLRRRLRLIRAPV
>NC_009767.1|WP_012121184.1|3472415_3473360_-|STAS-domain-containing-protein
MGWTQRRINTFLFVLILIGSLAALADVLMRDALLMTRVGYAVAAASTGILLIAYRRGWEYARHLMALGIALVIAAFINEPYISQQMDLLHAVPMVIALVLTGPRWLLINAALLLVILLVRGEWSGVYTKPVNLAAYAVLAGGMALSRLAVDNAQRLEAARRIAEEERERAANALTLAQQRANELERRNAEQEQLLRLISDLETPAITIADGVLLAPVVGRLDARRAQALNKRLLETAARQRARLVILDIAGVSHVDESVANSLIQTAQALQLIGCRVAVSGISPAVAALLASLSITLPDLITCRSPQDALTLHL
>NC_009767.1|WP_012121185.1|3473525_3475928_+|transglycosylase-SLT-domain-containing-protein
MHRLCCTLALAVSLVACAPEAPIPALETSIPTPLASEVATPDGTRSSETSAPDATVFPAASPNDLLARGLERRAAGDYDAAAQAFFAAMNAAPGTPVGREARFYLAESFALRERWTSAFEAFTAFVADGVQDTLTTRAWFWIARSHEEAGSHAAAVAAYAQYRAFDPPAAPYARMRQAAQEGALGRLEDAAAGYETVARSAIARGQRAAAYEAAIRARRSLGQNDAALQLAAELLALAQRPEYRARLLIELADLPRSQGDVATARTWLVEGLERAPGLPAALAAVDRLRADPEIALPPELVARVYEAHGRWSDALAALDAALAGADATQRADLLRRRALALRELGNFTAALEGFDAAIAAAGESDAGVQARLDRIQTVGQSGATESAIQGYRDFAAAWPDDPRAPEALRRAALLLDRLGNADAAAQQRIDLGRRYPALPLAQEAWFAGGLHLFVSGQTVQARQVWEELASATSGSVALRARYWAARAALATGDTDAGRAALEQIIIAAPDSYPAARARALLNRQETGALPLDAPISADDWRAVEEWLATWAGAPPPDVPDPAGDPAVQRALELDALNLRVEAMAEWSVALAARDDDPYALYLLGRYAHDHGAASVALRAANRLVRLAPGGDSASAPLALRRLLYPVPFTPVVLARAREFSVDPAFMFALLRQESAFDPAATSWAGARGLAQVMPATGQGIAQALGVSGFREVDLYRPDLSVRFGAFYISRQITAMNGSLEGALAAYNGGPGNARRWSGGAPIIDPDLFAERIDFFETRNYVKSVIAQYDVYRRLYRWSGE

Crispr_ID: NC_009767_69

• CRISPR_ID: NC_009767_69
• CRISPR_location: 3683596-3683697
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_69

Consensus_repeat	Method
ACGCTCAATCGCGTCACCTTCGAG	CRISPRCasFinder

spacers of NC_009767_69

>69.1|3683620|54|NC_009767|CRISPRCasFinder
GGCAACCGCGCGACGTATGACGGCGGCGCGCTTGTTGCGCGCGACTCTAACCTG

CRISPR arrays and Neighbor proteins around NC_009767_69

CRISPR arrays

The CRISPR arrays of NC_009767_69

>merge|NC_009767|69|3683596-3683697|CRISPRCasFinder
ACGCTCAATCGCGTCACCTTCGAGGGCAACCGCGCGACGTATGACGGCGGCGCGCTTGTTGCGCGCGACTCTAACCTGACGCTCAATCGCGTCACCTTTGAG

>NC_009767|69|60|3683596-3683697|CRISPRCasFinder
ACGCTCAATCGCGTCACCTTCGAG	GGCAACCGCGCGACGTATGACGGCGGCGCGCTTGTTGCGCGCGACTCTAACCTG
ACGCTCAATCGCGTCACCTTTGAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl|CDD|225921
NC_009767.1|WP_012121332.1|3677270_3678461_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270308
NC_009767.1|WP_012121328.1|3674567_3674966_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121342.1|3692384_3693503_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_012121329.1|3675131_3675551_-|transporter-RbsD/FucU	unknown	unknown	gnl|CDD|377444
NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase	unknown	unknown	gnl|CDD|223460
NC_009767.1|WP_012121340.1|3688501_3690181_+|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl|CDD|236992
NC_009767.1|WP_012121335.1|3681258_3682377_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NC_009767.1|WP_012121326.1|3672056_3672635_-|DUF4255-domain-containing-protein	unknown	unknown	gnl|CDD|379449
NC_009767.1|WP_157042846.1|3686595_3686970_+|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl|CDD|172703
NC_009767.1|WP_012121334.1|3680334_3681243_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224097
NC_009767.1|WP_012121333.1|3679326_3680187_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224098
NC_009767.1|WP_012121330.1|3675624_3675918_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|133394
NC_009767.1|WP_012121327.1|3672924_3674508_+|hypothetical-protein	unknown	unknown	gnl|CDD|235906
NC_009767.1|WP_012121339.1|3686984_3688271_+|CBS-domain-containing-protein	unknown	unknown	gnl|CDD|376875
NC_009767.1|WP_012121341.1|3690306_3692166_+|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl|CDD|235256
NC_009767.1|WP_012121337.1|3685692_3686268_+|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl|CDD|372685
NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|225118
NC_009767.1|WP_012121331.1|3675932_3676796_-|J-domain-containing-protein	unknown	unknown	gnl|CDD|184611
NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase	unknown	unknown	gnl|CDD|212515

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein	gnl|CDD|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	6.15904e-74
NC_009767.1|WP_012121332.1|3677270_3678461_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl|CDD|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.93599e-135
NC_009767.1|WP_012121339.1|3686984_3688271_+|CBS-domain-containing-protein	gnl|CDD|376875	pfam02641, DUF190, Uncharacterized ACR, COG1993.	2.01309e-40
NC_009767.1|WP_012121342.1|3692384_3693503_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.59785e-54
NC_009767.1|WP_012121329.1|3675131_3675551_-|transporter-RbsD/FucU	gnl|CDD|377444	pfam05025, RbsD_FucU, RbsD / FucU transport protein family. The Escherichia coli high-affinity ribose-transport system consists of six proteins encoded by the rbs operon (rbsD, rbsA, rbsC, rbsB, rbsK and rbsR). Of the six components, RbsD is the only one whose function is unknown although it is thought that it somehow plays a critical role in PtsG-mediated ribose transport. This family also includes FucU a protein from the fucose biosynthesis operon that is presumably also involved in fucose transport by similarity to RbsD.	1.0328e-36
NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase	gnl|CDD|223460	COG0383, AMS1, Alpha-mannosidase [Carbohydrate transport and metabolism].	9.0281e-177
NC_009767.1|WP_012121340.1|3688501_3690181_+|energy-dependent-translational-throttle-protein-EttA	gnl|CDD|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NC_009767.1|WP_012121335.1|3681258_3682377_-|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.8102e-166
NC_009767.1|WP_012121326.1|3672056_3672635_-|DUF4255-domain-containing-protein	gnl|CDD|379449	pfam14065, DUF4255, Protein of unknown function (DUF4255). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 320 amino acids in length.	2.79149e-29
NC_009767.1|WP_157042846.1|3686595_3686970_+|fluoride-efflux-transporter-CrcB	gnl|CDD|172703	PRK14215, PRK14215, fluoride efflux transporter CrcB.	3.31089e-54
NC_009767.1|WP_012121334.1|3680334_3681243_-|ABC-transporter-permease	gnl|CDD|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	1.55626e-89
NC_009767.1|WP_012121333.1|3679326_3680187_-|ABC-transporter-permease	gnl|CDD|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	4.65307e-84
NC_009767.1|WP_012121330.1|3675624_3675918_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|133394	cd04766, HTH_HspR, Helix-Turn-Helix DNA binding domain of the HspR transcription regulator. Helix-turn-helix (HTH) transcription regulator HspR, N-terminal domain. Heat shock protein regulators (HspR) have been shown to regulate expression of specific regulons in response to high temperature or high osmolarity in Streptomyces and Helicobacter, respectively. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	1.07726e-38
NC_009767.1|WP_012121327.1|3672924_3674508_+|hypothetical-protein	gnl|CDD|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	3.90102e-06
NC_009767.1|WP_012121341.1|3690306_3692166_+|phosphoenolpyruvate-carboxykinase-(GTP)	gnl|CDD|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
NC_009767.1|WP_012121337.1|3685692_3686268_+|carboxypeptidase-regulatory-like-domain-containing-protein	gnl|CDD|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	1.9407e-07
NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein	gnl|CDD|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	1.83717e-57
NC_009767.1|WP_012121331.1|3675932_3676796_-|J-domain-containing-protein	gnl|CDD|184611	PRK14297, PRK14297, molecular chaperone DnaJ.	1.06847e-73
NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase	gnl|CDD|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	1.16758e-34

Protein sequences

>NC_009767.1|WP_012121335.1|3681258_3682377_-|ABC-transporter-ATP-binding-protein
MLPGRAMNNGIAVDLRNVVKRFADVCAVDHVSMQIRDGEFFSMLGPSGCGKTTTLRMIAGFEFPTSGEIFLHGKSVGTTPPFRRNVNTVFQSYALFPHMTVAENVAFGLRMKKTPPADMSRRVTEALELVRLGDYAARRPRQLSGGQQQRVALARALVNHPEVLLLDEPLGALDLKLRKEMQLELKSLQERVGITFIYVTHDQEEALTMSDRIAVMNAGKVLQIGTPTEIYERPVCRFVADFIGETNFIEGKVESVESGGIATIVSDDGLTMRGQMIRPVPPATNVTLSIRPEKAFLSVQPPPPGTPNCHQVRVERVAYIGSDTRIDVRLGARLFDLWEQNSRSTLDRDAYWQPGETGYLWWPAENAIILTE
>NC_009767.1|WP_012121334.1|3680334_3681243_-|ABC-transporter-permease
MAADTLASDSQPREGQIAALLRRSERLQLGLLLFPGLFWLVTFFALPLVVVVLYSFATNGPGGRIEWTFTLNNYRTLFTESLYVNAYWRSIWAGVWTTLICLALGYPLAYSIVRRPPRWRTVLLFLILIPFWTNFLVRTYAWMLILSNNGIINSAIQSLGLPRVALYPSEGAVLIGLIYGSLPFMVLPIYASLARFDFTLMEAAADLGADQVRAFLRVMLPLTMPGVAAGSVLVFIPTVGQFVVSDLLGGAKVDYLGNLLQRLFTRSNPPNWPLGSAMAIVFMIVLTVAIIIYFRVTTEEDR
>NC_009767.1|WP_012121333.1|3679326_3680187_-|ABC-transporter-permease
MIDAQTTQSLRVVGGERRRSLGSLALGMHTVLTLAFLYAPIVVLVLFSFTRDSFGVRWTGFTFDWYARLLADQRLLTAAMNTLIVALVSTVVSTIIGTMTALAMERYRFRWRTGFDALLYLPIVIPEIVMALALLAFFAFSFGLLETLFGIRLQFGLATVTIAHIAFTISFVVVVVRASLKGFDMRLEEAAQDLGANEWQTFRYITLPLIMPGVIGGALLAFTLSLDDFVITFFTTGSGVSLLPVEVYGQVKRAITPKINAISTLMLLVSITLVFLSQFVQRRREI
>NC_009767.1|WP_012121332.1|3677270_3678461_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MLKGRTRFIALLLAVLLTLAACGGQPTGSPGNEYGSGGATTEPTTAPPAQPSTGDELQVDRSRLSSELRFFNWTDYVDPSILEDFEKEYGVKVIVDLFDANEDMLAKVRAGRSGYDIVTPSDYAVEIMWRDGLIAKLDKSLLPNLKNIDPDLLNKYFDPGNVYSVPYMYGITGIAYNRQSFPNGVESWAVLFDTAEIARYRGQFSMLDDERETPGAALKFLGYSLNETSPEALKKAQDLLIAQKPFLAGYNSSDVNRKLASGEYVIAHAWSGSALQARNGLGDEFSGNPDIAFVIPKEGGMIWMDNMVILADSPNAYTAHVFMNFLMRPDIAARNAEYIGYLSPNVEAIKLLPQEIIDLYNEGFAPNDEVLKRLEWAIRNDQTAAFTDLWTAVKGE
>NC_009767.1|WP_012121331.1|3675932_3676796_-|J-domain-containing-protein
MAFKDYYEILGVDRNATDAEIKKAYRKLARQYHPDINPGNKAAEARFKEINEAYEVLSDKEKRAKYDRFGRDWQRYQDIPDFGGFGAGDFADIFETLFGGGRGGRSSVTYRAKGQDVEQSVDITLEEAFSGTQRTLQVQSLNGSLRSITVRIPPGVDSGSRVRIAGEGAPGIGGGARGDLYLVINVLPHSRFERRGDDLYVRIPVDLYTMLLGGEVKVPAMGGRTVALKVPAGTQNGKVMRISGQGMPRLRDPQTRGDLYVTLEVSLPTSLSPRERELVEQLRALAR
>NC_009767.1|WP_012121330.1|3675624_3675918_-|helix-turn-helix-transcriptional-regulator
MKQRYYTIKSAAALCGMHEQSLRLYERRGLIRPQRTPGNIRRYTESDIEQIRFIKRLIDDLGVNLAGVEVILHLRQQLIAAQRELEELRDRLPVDVS
>NC_009767.1|WP_012121329.1|3675131_3675551_-|transporter-RbsD/FucU
MLHYKLIHPQILAALGGAGHGSRVLIADGNYPFATGAPAGAQRVYLNLAPGLLTVTDVLAVLADAIPIESAHVMVPDTAPEPAIFTEFRALLPHLTLQPLGRFAFYDAARAPDTALVIATGEQRVYANILLTIGVVSPA
>NC_009767.1|WP_012121328.1|3674567_3674966_-|hypothetical-protein
MLALLAPARITLAVEADGTRTLQAQGKGIVKLVGDGSVSIGRGADAVWVKNATRIMTEGKGRRTVLPDGTVRLTGYTGAITLIGEGMEVKVVGGVITIRAEGHGTATLYGAGTYETVAAQGEWVRAGAQVEY
>NC_009767.1|WP_012121327.1|3672924_3674508_+|hypothetical-protein
MDEHNKRSGDRRDAMITLHVPRSVLTALWALGSLIALALVAVAFVAGLALRPVMPTAAPVAVTTIILEATATSAPIVAAINVSTSPTVVASPTALPTDIPTTQPTIDLIRPTAAFPTAMLPTAASTATPDTVDFRIDSPPGAEGQPPAANAPVQAAIAQPQPQAAPPGGAPAARPADAGGSGGSVRPVATARPAQHALRGSVRWSAASSPILIQNDLLVSSGASLIIEPGVEVQIGRGVSLVIDGSMVALATPDQPVRFTQIGGGDDPRLRWESIIGRAGSVIDLRNVTITGGGAGGSVLTVQAGRLSLQSARIINNGGHLRIDDSFVIIRDSEISGNRMPYGSAIDITLSRGGGDSPGSDIVIVNNRILNNALVAGTAPLRITNLSFERPARIEIEQNLLVGAAGPNLALFTNAQLMGNVRCNTLIGGANGLSLRSDAPPNLSPMLNIRDNAIEAHEPPNNPFYRQFNIGKGATSDLPLTMTNNWWELPSGPYEPAANPEGRGEAVGPNITFLPWLPERPACAPRF
>NC_009767.1|WP_012121326.1|3672056_3672635_-|DUF4255-domain-containing-protein
MSSALAIASVTAFLKSVLENGLVDEGVNASIGSDAIVSALPPDRIATGADERPQINLFLHQVTPHAGLRTGERSGQRMALGLDLHYLLTAYGAQDLQIEILLGYAALVLCRMPFAGRDAIREALATLASDDHGGIPPPTLQALAGFDPGSQIERLEIRPQYLSGEELTKIWSPLQARYRPSLSYRVSMVTIG
>NC_009767.1|WP_012121337.1|3685692_3686268_+|carboxypeptidase-regulatory-like-domain-containing-protein
MNFRKLTASALIIAGAWLLLWSMGSRFDLSRSAQAQELPPRPTLTPVAPAEEPRREPRPGRIVGTVIDLTTGAPAAGVTVRINSDALTTDANGNYGRENLTPGTYVVDLIIPPERGTPAQGAITITLPEGETARQDLAFYGPPPAPMPSAETAPMPPAALPVTGASDDAAWLAALGTLLLAGGGFLLRRAT
>NC_009767.1|WP_157042846.1|3686595_3686970_+|fluoride-efflux-transporter-CrcB
MNAIAIAVGAAIGANLRYSLSLWAAQRWGASFPYGTLIVNVIGSFLIGLVLVLATTRLNLSDLARLLIVTGLLGGFTTFSSLSFETYSLIVSGSWRVAGIYLASSFGLGMAGVFLGAGVARLLP
>NC_009767.1|WP_012121339.1|3686984_3688271_+|CBS-domain-containing-protein
MDLSGHAQQVWIFLGESDQWHGRPLSLALLEMLKRNGIAGGTVLRGIAGYGAHSFIHTTSLVELSSDLPVIVTFVDRPDRVARVMPEIMSMVREGLITTIPVEVLKYTSRAVGPFPAHLTVADIMSRQVVSVRPDTPIAVIVELLIDRALRSAPVVDAENRVVGIITDGDLLTRGATELPLALQRELSLAERAAAVEILAERPHTAADLMTPDPVTLPMTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMVSRYDLLSTVAEGLRQRPAEPVVPSGGAPQTVGDIMMTGIPTVRPDTPLAETLDHLLETDKRRVVVVDEHHHVVGIISDGDVLRRAAKRVRSGALRALAAWFGGGARPPGLEVAAEGRTAADVMTSPVVTLPADAPITEAVRLMMTHKIKRIPVVDADKRFVGMVGRAGVLAALSRRT
>NC_009767.1|WP_012121340.1|3688501_3690181_+|energy-dependent-translational-throttle-protein-EttA
MTDANKIIYSMIRVGKVVPPNRPVLKDISLSYFYGAKIGVIGLNGSGKSTLLRIMAGVDHDFFGETVIAPGYTIGFLEQEPRLDDTLTVRQTVEQGVQQIVDLLRRYDDINERFSDPDANVDALIAEQSALQEQLDHLDAWDLDSRLELAMDALRCPPGDTPVAVLSGGERRRVALCRLLLQKPDILLLDEPTNHLDAESVAWLERHLQDYPGTVVCVTHDRRFLNNVAEWILELDRGMGVPWRGNYASWLAQKQQQIAAAEKAESQRQKTLTRELEWINTAPRARQTKSKARIAAYEQLLSQSAERAERDLEIYIPPGPRLGDLVIRAEHVTKAYGDTFLYDDLTFDVPPGAIVGVIGPNGAGKTTLFRMITGQEQPDSGRLIVGPSVKLGYVDQSRATLNPDRTVWEEISGGDDVMLLGNRQVNSRSYVARFNFTGADQQKKVGTLSGGERNRVHLAKVLRSGANVLLLDEPTNDLDVHTLRALEDALINFAGCALIISHDRWFLDRVATHILAFENESSVLWFPGTYSEYEEDRRRRLGKAADQPHRAVYRRLTRG
>NC_009767.1|WP_012121341.1|3690306_3692166_+|phosphoenolpyruvate-carboxykinase-(GTP)
METSVMEVPAYVTNEKLIRWVQEMVDLCKPDRVHWCDGSKAEYDALCEQLVQSGTFTRLNQEKWPGCFLARSDPSDVARVEDRTFICSVSRNDAGPTNNWMAPREMKETLIPLFDGSMRGRTMYVIPFCMGPIGSPLAQIGVELTDSAYVVVNMWIMTRIGKKVIEALGNNDFVPCLHSVGAPLAPGQKDVPWPCNPTVKYIVHFPEERMIWSYGSGYGGNALLGKKCLALRIASVIARDEGWLAEHMLILGVKDPKGRKTYVAAAFPSACGKTNFAMLIPPKPFQEEGWEVTTVGDDIAWIKPGPDGRLYAINPESGYFGVAPGTSYDTNPNAMVALSRNTIFTNVALTPDGGVWWEGMTKEPPPEAIDWQGKHWTPDSGRKAAHPNARFTAPAAQNPAIDPDWENPQGVPIRAFIFGGRRSMVVPLVYQSFNWTFGVYLAATMGSEMTAAAFGKIGEVRRDPMAMLPFCGYHMGDYFNHWLQFGRTIPNPPRIFSVNWFRKDAEGNFLWPGFGENMRVLKWIVERANGRAVGIESPIGWMPRYDDIDWRGLENFSEEKFTELMAVDRDQWSQEILLHEELFLKLYDRLPKEFRSVRDLLLSALWRSPEHWDLLDGGH
>NC_009767.1|WP_012121342.1|3692384_3693503_+|Gfo/Idh/MocA-family-oxidoreductase
MHDTVVRFGVVGAGSVAVRGLLPHLSQPDMRDRVRLVAVCDPAPGRAAAAAARFGCEHAFTDYDDMLAAGVVDAITIATPIGLHYEQGRKALDAGLHVHFNKTMTTTVAEASDLIERAAVRGLKIVASPGEMLRPHNQRIKQLIAEGAIGTLCWAACGAAFGRYHEEESVRHGADPLTNIDPTWYYHKPGGGPLYDMTVYSLHALTGILGPARRVTALSGVRVRIREFRGAWHPVDADDNTLILIDFGDNLFALAYGTPAGTLTEGFSGSYFGTTGSIIGRKLNGQPFDYPGRADAEAHPHGDQILLPHVVGAHCEIEEQHVWEDIMQLIDWIRDGIPSIVTAEHARHVIEIIEAAYRAAETGQTRELHTTF
>NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein
MKLKHLIEPGDPERIAGGFEFTEGPVWHPDGFLIFSDIPANRQYRWHPTEGVSVWREPSGNSNGLTLDRQGYIIACEHGGRRVSRAKPGAEPVTLADRYDGKRLNSPNDVVVKSDGTIYFTDPPYGIAPEDREQPCNGVYRILPDGSIELLVDDFDRPNGLAFSPDETILYIDDSPRRHVRAFDVLPDGRLANSRIFADMDHPQPGSPDGMKVDREGNLYVTGATGVWVFEPDGTLLGVIVTPERPANCAWGDTDRQTLYITARTSLYRVRTRVPGIPVPR
>NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein
MTQSVSDPIAELQREIDALRIDRERDLRALNVLRTVSIACLGKPNARAIFEAMHQALLPVFRYDAAYFAVCDPGNRETFRAALLVDEESVEYLEHTPYGPLTGMLVQHRQPLLFYDLLHERTLLTPPPERFGNQQKHSRSWMGTPLLLGYETVGVMSIQSYRPGIYNQDHLDLLQRIGNLLAVALENAALVEQQQTLSNELTERIAARTRELTMLTALAEELAFQRPLSELLDRALSLLVDHLAMSGGAVRLLSSDGAELTLAAAYGFPPAYADQLARIPVASSLMRSVIEERRPLIIDNLAQSEHWQRLGLHYRSLIAVPLQIGDRALGSLLLVDTRQRAIQDQEIEFVRTVGHQIAIGIKTAQLLAERERQVAELSALSDISHAASTTLELRALLRHIARALARFMRADVFSVAVYDAERDVISDGFSIDDGEEHSFWQFQPPPSDSLTAWVLRNQRALRFDNLLDEIGRYPELRLHAIGTDRMALSWLGVPLIGREGQPIGVLTVQAYSPCAFDDRDERFLAAVARQVALHVQNVMLFAAEQEARRTADTLREVARVLSAAFSSGEVLNVILRELKKVIPYDSASIMLREGRVLRAAAVAPEHIATRLDAMDRPLNEPGAAVWVVHHKQPLLIEDVSVSHIWAPKPQISNIQSWIGVPLLVKGEVLGVLNIDSTQKGRFTQRDVEVAQVFADNAAIAIENARLYAESIARREQELEIARRIQSNLFPRELPRRQGIALAARCLPAREVGGDFFDCFALGERRSIAVMIGDASGKSVAGALLMAMARSVGRAEAFDHEEPALVLRETNRSVAHDVPRGTFVALCYATIDPSGRIAVANAGQLTPVLVHADGAIQYLYPPGPTLPLGIQSNIGYETLAIDLAPGDTVVFFTDGLVEAHNATGELFGFERLDALLTKEAGLPPDALIDRIIDEVIAFMGDTVQHDDMTLVVVQFGGERTND
>NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase
MLFFTVEKLKARLEEMRAAIIRDTRPITDVFTCPVPGAPSEHAMSPPPPPDDPSWRPLKVGERWGGDPHNPDKPDEPLPWGMPVDGGHTHWLRAIIRIPEEWRGRQVLMRMRWSAEGHAGIEGIAYLDGTTLAGIDEPHPAILLPEHAHEGDHELLIRCYTPYRRSFGGLELQLRSDIIARLAAVMYAILDALPTYRDSDPEKHALLDRINRAYNLLDLREGWQSERFEISAGAALTFLRETLTANLAPGQRPIILATGHAHMDVAWLWPLWRTHQKIAHTVATALHLMERYPEYHFSMSQPQTYAFLKQDDPELYERLRQRVAEGRFEPVGAMWLEPDCNVTGGESLVRQVIHGIRFFENEFGPIEHIVWLPDVFGYSAALPQIMRLAGISCFMTTKISWNQFNRMPYDTFRWRGIDGSEVLAHFVTATSAPVKPNPTEAQFYTYNGSMLPSEVFGTWNHYRQKDINDEVLYIYGHGDGGGGPTEEMLELARVMADLPGFPVVQPGRVEQYFQRLRQRVWNNPRLPVWVGELYLEYHRGTYTSQARTKQNNRQAELLLREAEWLNAWAVTHGAINRQADLDAAWRTVLLNQFHDILPGSSVPLVYVESEQQFAEVRDTVETVRHAAITDLTGSHSNGAAPHLAVFNGLAWDRTECVAIPLEDLRQPLIEGPTQVVEQIDGTRTLLVEATVPAFGYAALRAARHPSPPAQFITRRDYLASDEFRIEFDANGEIGSLYDARYEREIIAEGATGNQLVLYEDRPMFWDAWDIDPFYLEKPYPIHNISEWRVIEEGPLRATVEIARRFGRSTIRQRISLWHNNRRIDFETEVDWQERQNLLRVLFPLRLNAARATCEIQFGAVERPTHRNTSWDWARFEVCAHRWIDLSEGGYGVALLNNGKYGHSLLHNTLGISLLKSAVIPDPQADRGLHRFIYSLLPHAGDWREAQVTRRAYELNAPLRPVTVAGEIPAEGRSFLHVDSDHVIVETIKTADDGDGLIVRMYEAHNQRGQVRLEFGQPVESAVEVDLLERETGPVTVDGRTVRCNVRPFEIKTIRVRLKPPL
>NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase
MKTHPLTALQVIGVRYRGSTPAENDERALDAYAASGVYHAASVPTTISEPRMPATQRRIDEPSNLGWICRAIADDVAAAHARGRAPLIVGGDCTHAVGVVAGLQRSHGPNARIGLVWFDAHGDYNTPRTTLSGMLGGMPVAVCAGLALPQWRDLAGMQAPLPTDRIMLVDARNLDPPEEQLIRATETAIADVNDFAGPLASLAAACDVLYLHVDSDILEAALVPNHATREPDGPGLSEVSAAIDTVMATGKVGAFAVVSVYGAGPGSDISVASGTALIRAGLEAWARHGTV

Crispr_ID: NC_009767_70

• CRISPR_ID: NC_009767_70
• CRISPR_location: 3685459-3685575
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_70

Consensus_repeat	Method
GCGCCCCGGTGTGGGCGCCAGACGAAGAAGGCACGTGATCCGTTG	CRISPRCasFinder

spacers of NC_009767_70

>70.1|3685504|27|NC_009767|CRISPRCasFinder
GGTTGTTGCTCAACCTCCGCCCACCTT

CRISPR arrays and Neighbor proteins around NC_009767_70

CRISPR arrays

The CRISPR arrays of NC_009767_70

>merge|NC_009767|70|3685459-3685575|CRISPRCasFinder
GCGCCCCGGTGTGGGCGCCAGACGAAGAAGGCACGTGATCCGTTGGGTTGTTGCTCAACCTCCGCCCACCTTGCGCCCCGGTGTGGGCGCCAGACGAAGAAGGCGCGTGATCCGTTG

>NC_009767|70|61|3685459-3685575|CRISPRCasFinder
GCGCCCCGGTGTGGGCGCCAGACGAAGAAGGCACGTGATCCGTTG	GGTTGTTGCTCAACCTCCGCCCACCTT
GCGCCCCGGTGTGGGCGCCAGACGAAGAAGGCGCGTGATCCGTTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl|CDD|225921
NC_009767.1|WP_012121332.1|3677270_3678461_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270308
NC_009767.1|WP_012121328.1|3674567_3674966_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121342.1|3692384_3693503_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009767.1|WP_012121329.1|3675131_3675551_-|transporter-RbsD/FucU	unknown	unknown	gnl|CDD|377444
NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase	unknown	unknown	gnl|CDD|223460
NC_009767.1|WP_012121340.1|3688501_3690181_+|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl|CDD|236992
NC_009767.1|WP_012121335.1|3681258_3682377_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NC_009767.1|WP_012121339.1|3686984_3688271_+|CBS-domain-containing-protein	unknown	unknown	gnl|CDD|376875
NC_009767.1|WP_157042846.1|3686595_3686970_+|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl|CDD|172703
NC_009767.1|WP_012121334.1|3680334_3681243_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224097
NC_009767.1|WP_012121333.1|3679326_3680187_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224098
NC_009767.1|WP_012121330.1|3675624_3675918_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|133394
NC_009767.1|WP_012121336.1|3683136_3685416_+|choice-of-anchor-D-domain-containing-protein	unknown	unknown	gnl|CDD|380152
NC_009767.1|WP_012121327.1|3672924_3674508_+|hypothetical-protein	unknown	unknown	gnl|CDD|235906
NC_009767.1|WP_012121341.1|3690306_3692166_+|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl|CDD|235256
NC_009767.1|WP_012121337.1|3685692_3686268_+|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl|CDD|372685
NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|225118
NC_009767.1|WP_012121331.1|3675932_3676796_-|J-domain-containing-protein	unknown	unknown	gnl|CDD|184611
NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase	unknown	unknown	gnl|CDD|212515

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein	gnl|CDD|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	1.83717e-57
NC_009767.1|WP_012121332.1|3677270_3678461_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl|CDD|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.93599e-135
NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein	gnl|CDD|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	6.15904e-74
NC_009767.1|WP_012121342.1|3692384_3693503_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.59785e-54
NC_009767.1|WP_012121329.1|3675131_3675551_-|transporter-RbsD/FucU	gnl|CDD|377444	pfam05025, RbsD_FucU, RbsD / FucU transport protein family. The Escherichia coli high-affinity ribose-transport system consists of six proteins encoded by the rbs operon (rbsD, rbsA, rbsC, rbsB, rbsK and rbsR). Of the six components, RbsD is the only one whose function is unknown although it is thought that it somehow plays a critical role in PtsG-mediated ribose transport. This family also includes FucU a protein from the fucose biosynthesis operon that is presumably also involved in fucose transport by similarity to RbsD.	1.0328e-36
NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase	gnl|CDD|223460	COG0383, AMS1, Alpha-mannosidase [Carbohydrate transport and metabolism].	9.0281e-177
NC_009767.1|WP_012121340.1|3688501_3690181_+|energy-dependent-translational-throttle-protein-EttA	gnl|CDD|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NC_009767.1|WP_012121335.1|3681258_3682377_-|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.8102e-166
NC_009767.1|WP_012121339.1|3686984_3688271_+|CBS-domain-containing-protein	gnl|CDD|376875	pfam02641, DUF190, Uncharacterized ACR, COG1993.	2.01309e-40
NC_009767.1|WP_157042846.1|3686595_3686970_+|fluoride-efflux-transporter-CrcB	gnl|CDD|172703	PRK14215, PRK14215, fluoride efflux transporter CrcB.	3.31089e-54
NC_009767.1|WP_012121334.1|3680334_3681243_-|ABC-transporter-permease	gnl|CDD|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	1.55626e-89
NC_009767.1|WP_012121333.1|3679326_3680187_-|ABC-transporter-permease	gnl|CDD|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	4.65307e-84
NC_009767.1|WP_012121330.1|3675624_3675918_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|133394	cd04766, HTH_HspR, Helix-Turn-Helix DNA binding domain of the HspR transcription regulator. Helix-turn-helix (HTH) transcription regulator HspR, N-terminal domain. Heat shock protein regulators (HspR) have been shown to regulate expression of specific regulons in response to high temperature or high osmolarity in Streptomyces and Helicobacter, respectively. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	1.07726e-38
NC_009767.1|WP_012121336.1|3683136_3685416_+|choice-of-anchor-D-domain-containing-protein	gnl|CDD|380152	NF012200, choice_anch_D, choice-of-anchor D domain-containing protein. This HMM describes a repeat domain just over 100 amino acids long and usually found in tandem copies. Members appear to be extracellular proteins that have some C-terminal anchoring domain, such as type IX secrection (T9SS) or PEP-CTERM.	2.62407e-12
NC_009767.1|WP_012121327.1|3672924_3674508_+|hypothetical-protein	gnl|CDD|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	3.90102e-06
NC_009767.1|WP_012121341.1|3690306_3692166_+|phosphoenolpyruvate-carboxykinase-(GTP)	gnl|CDD|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
NC_009767.1|WP_012121337.1|3685692_3686268_+|carboxypeptidase-regulatory-like-domain-containing-protein	gnl|CDD|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	1.9407e-07
NC_009767.1|WP_012121331.1|3675932_3676796_-|J-domain-containing-protein	gnl|CDD|184611	PRK14297, PRK14297, molecular chaperone DnaJ.	1.06847e-73
NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase	gnl|CDD|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	1.16758e-34

Protein sequences

>NC_009767.1|WP_012121336.1|3683136_3685416_+|choice-of-anchor-D-domain-containing-protein
MHHSRAFSLATIFFVITLAAGWLLSAPSSRAATFTIPCGDVTALITAITTANSNNQPDTIALAAGCTYSLTTVDNTVGGSANGLPAIIIDSGNPTNSLTINGNGATIERAAGSPSFRLLYLTNVAVTINDLTFRNGFAEDDEGGAMRARSPDLTLNRVTFEGNRATYDGGALVARDSNLTLNRVTFESNRAGSDGGALYTVSVMANLSDSIFRNNQSDANGGAIAFRVDGPGQATIKGSTFSNNQAASDGGAIAAFHEITVQNSTFSNNQADGDGGAVLSNESAVVAYTTITGTQTGGDGALNGSITLRSALVAGNTDTSTSPGNYPDIAGSIASDGYNLIGNVGDYDFSANTTGDQYGDPNGTTIPNSGAVESPTPIDPLLAPLANNGGPTPTHALLAGSPALNRILGGTNDCGVAIAIDQRGISRPQDGACDVGAFEAIPAPEIVVYNGPDTSSPELTNNQTTAVDFGATTVGAPISRVFAIRNTGTAPLTLGALSLPSGFAVVGAFPTGPVAPGATVTFTVQLTAVAAGVFSGTLSFVNGDADENPFQFPIRGVVTAATPTLQQTYLPLIVQPGQPDLIIAGIEIIPNQTSFTAGQPVEIRVTVKNVGTAPAGSFWVDLYLNPDRPPQINDLWHDRCALRPCFGVAWGVTQILQPGEQITLSTGGGYDPLRSYWLGWLANGTTTIYALADSWNTSGASGAVRESDETNNRGVRDGLTVSGANPPAPPWKPSVLTGAAQESLLPERPAYDGTFRAER
>NC_009767.1|WP_012121335.1|3681258_3682377_-|ABC-transporter-ATP-binding-protein
MLPGRAMNNGIAVDLRNVVKRFADVCAVDHVSMQIRDGEFFSMLGPSGCGKTTTLRMIAGFEFPTSGEIFLHGKSVGTTPPFRRNVNTVFQSYALFPHMTVAENVAFGLRMKKTPPADMSRRVTEALELVRLGDYAARRPRQLSGGQQQRVALARALVNHPEVLLLDEPLGALDLKLRKEMQLELKSLQERVGITFIYVTHDQEEALTMSDRIAVMNAGKVLQIGTPTEIYERPVCRFVADFIGETNFIEGKVESVESGGIATIVSDDGLTMRGQMIRPVPPATNVTLSIRPEKAFLSVQPPPPGTPNCHQVRVERVAYIGSDTRIDVRLGARLFDLWEQNSRSTLDRDAYWQPGETGYLWWPAENAIILTE
>NC_009767.1|WP_012121334.1|3680334_3681243_-|ABC-transporter-permease
MAADTLASDSQPREGQIAALLRRSERLQLGLLLFPGLFWLVTFFALPLVVVVLYSFATNGPGGRIEWTFTLNNYRTLFTESLYVNAYWRSIWAGVWTTLICLALGYPLAYSIVRRPPRWRTVLLFLILIPFWTNFLVRTYAWMLILSNNGIINSAIQSLGLPRVALYPSEGAVLIGLIYGSLPFMVLPIYASLARFDFTLMEAAADLGADQVRAFLRVMLPLTMPGVAAGSVLVFIPTVGQFVVSDLLGGAKVDYLGNLLQRLFTRSNPPNWPLGSAMAIVFMIVLTVAIIIYFRVTTEEDR
>NC_009767.1|WP_012121333.1|3679326_3680187_-|ABC-transporter-permease
MIDAQTTQSLRVVGGERRRSLGSLALGMHTVLTLAFLYAPIVVLVLFSFTRDSFGVRWTGFTFDWYARLLADQRLLTAAMNTLIVALVSTVVSTIIGTMTALAMERYRFRWRTGFDALLYLPIVIPEIVMALALLAFFAFSFGLLETLFGIRLQFGLATVTIAHIAFTISFVVVVVRASLKGFDMRLEEAAQDLGANEWQTFRYITLPLIMPGVIGGALLAFTLSLDDFVITFFTTGSGVSLLPVEVYGQVKRAITPKINAISTLMLLVSITLVFLSQFVQRRREI
>NC_009767.1|WP_012121332.1|3677270_3678461_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MLKGRTRFIALLLAVLLTLAACGGQPTGSPGNEYGSGGATTEPTTAPPAQPSTGDELQVDRSRLSSELRFFNWTDYVDPSILEDFEKEYGVKVIVDLFDANEDMLAKVRAGRSGYDIVTPSDYAVEIMWRDGLIAKLDKSLLPNLKNIDPDLLNKYFDPGNVYSVPYMYGITGIAYNRQSFPNGVESWAVLFDTAEIARYRGQFSMLDDERETPGAALKFLGYSLNETSPEALKKAQDLLIAQKPFLAGYNSSDVNRKLASGEYVIAHAWSGSALQARNGLGDEFSGNPDIAFVIPKEGGMIWMDNMVILADSPNAYTAHVFMNFLMRPDIAARNAEYIGYLSPNVEAIKLLPQEIIDLYNEGFAPNDEVLKRLEWAIRNDQTAAFTDLWTAVKGE
>NC_009767.1|WP_012121331.1|3675932_3676796_-|J-domain-containing-protein
MAFKDYYEILGVDRNATDAEIKKAYRKLARQYHPDINPGNKAAEARFKEINEAYEVLSDKEKRAKYDRFGRDWQRYQDIPDFGGFGAGDFADIFETLFGGGRGGRSSVTYRAKGQDVEQSVDITLEEAFSGTQRTLQVQSLNGSLRSITVRIPPGVDSGSRVRIAGEGAPGIGGGARGDLYLVINVLPHSRFERRGDDLYVRIPVDLYTMLLGGEVKVPAMGGRTVALKVPAGTQNGKVMRISGQGMPRLRDPQTRGDLYVTLEVSLPTSLSPRERELVEQLRALAR
>NC_009767.1|WP_012121330.1|3675624_3675918_-|helix-turn-helix-transcriptional-regulator
MKQRYYTIKSAAALCGMHEQSLRLYERRGLIRPQRTPGNIRRYTESDIEQIRFIKRLIDDLGVNLAGVEVILHLRQQLIAAQRELEELRDRLPVDVS
>NC_009767.1|WP_012121329.1|3675131_3675551_-|transporter-RbsD/FucU
MLHYKLIHPQILAALGGAGHGSRVLIADGNYPFATGAPAGAQRVYLNLAPGLLTVTDVLAVLADAIPIESAHVMVPDTAPEPAIFTEFRALLPHLTLQPLGRFAFYDAARAPDTALVIATGEQRVYANILLTIGVVSPA
>NC_009767.1|WP_012121328.1|3674567_3674966_-|hypothetical-protein
MLALLAPARITLAVEADGTRTLQAQGKGIVKLVGDGSVSIGRGADAVWVKNATRIMTEGKGRRTVLPDGTVRLTGYTGAITLIGEGMEVKVVGGVITIRAEGHGTATLYGAGTYETVAAQGEWVRAGAQVEY
>NC_009767.1|WP_012121327.1|3672924_3674508_+|hypothetical-protein
MDEHNKRSGDRRDAMITLHVPRSVLTALWALGSLIALALVAVAFVAGLALRPVMPTAAPVAVTTIILEATATSAPIVAAINVSTSPTVVASPTALPTDIPTTQPTIDLIRPTAAFPTAMLPTAASTATPDTVDFRIDSPPGAEGQPPAANAPVQAAIAQPQPQAAPPGGAPAARPADAGGSGGSVRPVATARPAQHALRGSVRWSAASSPILIQNDLLVSSGASLIIEPGVEVQIGRGVSLVIDGSMVALATPDQPVRFTQIGGGDDPRLRWESIIGRAGSVIDLRNVTITGGGAGGSVLTVQAGRLSLQSARIINNGGHLRIDDSFVIIRDSEISGNRMPYGSAIDITLSRGGGDSPGSDIVIVNNRILNNALVAGTAPLRITNLSFERPARIEIEQNLLVGAAGPNLALFTNAQLMGNVRCNTLIGGANGLSLRSDAPPNLSPMLNIRDNAIEAHEPPNNPFYRQFNIGKGATSDLPLTMTNNWWELPSGPYEPAANPEGRGEAVGPNITFLPWLPERPACAPRF
>NC_009767.1|WP_012121337.1|3685692_3686268_+|carboxypeptidase-regulatory-like-domain-containing-protein
MNFRKLTASALIIAGAWLLLWSMGSRFDLSRSAQAQELPPRPTLTPVAPAEEPRREPRPGRIVGTVIDLTTGAPAAGVTVRINSDALTTDANGNYGRENLTPGTYVVDLIIPPERGTPAQGAITITLPEGETARQDLAFYGPPPAPMPSAETAPMPPAALPVTGASDDAAWLAALGTLLLAGGGFLLRRAT
>NC_009767.1|WP_157042846.1|3686595_3686970_+|fluoride-efflux-transporter-CrcB
MNAIAIAVGAAIGANLRYSLSLWAAQRWGASFPYGTLIVNVIGSFLIGLVLVLATTRLNLSDLARLLIVTGLLGGFTTFSSLSFETYSLIVSGSWRVAGIYLASSFGLGMAGVFLGAGVARLLP
>NC_009767.1|WP_012121339.1|3686984_3688271_+|CBS-domain-containing-protein
MDLSGHAQQVWIFLGESDQWHGRPLSLALLEMLKRNGIAGGTVLRGIAGYGAHSFIHTTSLVELSSDLPVIVTFVDRPDRVARVMPEIMSMVREGLITTIPVEVLKYTSRAVGPFPAHLTVADIMSRQVVSVRPDTPIAVIVELLIDRALRSAPVVDAENRVVGIITDGDLLTRGATELPLALQRELSLAERAAAVEILAERPHTAADLMTPDPVTLPMTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMVSRYDLLSTVAEGLRQRPAEPVVPSGGAPQTVGDIMMTGIPTVRPDTPLAETLDHLLETDKRRVVVVDEHHHVVGIISDGDVLRRAAKRVRSGALRALAAWFGGGARPPGLEVAAEGRTAADVMTSPVVTLPADAPITEAVRLMMTHKIKRIPVVDADKRFVGMVGRAGVLAALSRRT
>NC_009767.1|WP_012121340.1|3688501_3690181_+|energy-dependent-translational-throttle-protein-EttA
MTDANKIIYSMIRVGKVVPPNRPVLKDISLSYFYGAKIGVIGLNGSGKSTLLRIMAGVDHDFFGETVIAPGYTIGFLEQEPRLDDTLTVRQTVEQGVQQIVDLLRRYDDINERFSDPDANVDALIAEQSALQEQLDHLDAWDLDSRLELAMDALRCPPGDTPVAVLSGGERRRVALCRLLLQKPDILLLDEPTNHLDAESVAWLERHLQDYPGTVVCVTHDRRFLNNVAEWILELDRGMGVPWRGNYASWLAQKQQQIAAAEKAESQRQKTLTRELEWINTAPRARQTKSKARIAAYEQLLSQSAERAERDLEIYIPPGPRLGDLVIRAEHVTKAYGDTFLYDDLTFDVPPGAIVGVIGPNGAGKTTLFRMITGQEQPDSGRLIVGPSVKLGYVDQSRATLNPDRTVWEEISGGDDVMLLGNRQVNSRSYVARFNFTGADQQKKVGTLSGGERNRVHLAKVLRSGANVLLLDEPTNDLDVHTLRALEDALINFAGCALIISHDRWFLDRVATHILAFENESSVLWFPGTYSEYEEDRRRRLGKAADQPHRAVYRRLTRG
>NC_009767.1|WP_012121341.1|3690306_3692166_+|phosphoenolpyruvate-carboxykinase-(GTP)
METSVMEVPAYVTNEKLIRWVQEMVDLCKPDRVHWCDGSKAEYDALCEQLVQSGTFTRLNQEKWPGCFLARSDPSDVARVEDRTFICSVSRNDAGPTNNWMAPREMKETLIPLFDGSMRGRTMYVIPFCMGPIGSPLAQIGVELTDSAYVVVNMWIMTRIGKKVIEALGNNDFVPCLHSVGAPLAPGQKDVPWPCNPTVKYIVHFPEERMIWSYGSGYGGNALLGKKCLALRIASVIARDEGWLAEHMLILGVKDPKGRKTYVAAAFPSACGKTNFAMLIPPKPFQEEGWEVTTVGDDIAWIKPGPDGRLYAINPESGYFGVAPGTSYDTNPNAMVALSRNTIFTNVALTPDGGVWWEGMTKEPPPEAIDWQGKHWTPDSGRKAAHPNARFTAPAAQNPAIDPDWENPQGVPIRAFIFGGRRSMVVPLVYQSFNWTFGVYLAATMGSEMTAAAFGKIGEVRRDPMAMLPFCGYHMGDYFNHWLQFGRTIPNPPRIFSVNWFRKDAEGNFLWPGFGENMRVLKWIVERANGRAVGIESPIGWMPRYDDIDWRGLENFSEEKFTELMAVDRDQWSQEILLHEELFLKLYDRLPKEFRSVRDLLLSALWRSPEHWDLLDGGH
>NC_009767.1|WP_012121342.1|3692384_3693503_+|Gfo/Idh/MocA-family-oxidoreductase
MHDTVVRFGVVGAGSVAVRGLLPHLSQPDMRDRVRLVAVCDPAPGRAAAAAARFGCEHAFTDYDDMLAAGVVDAITIATPIGLHYEQGRKALDAGLHVHFNKTMTTTVAEASDLIERAAVRGLKIVASPGEMLRPHNQRIKQLIAEGAIGTLCWAACGAAFGRYHEEESVRHGADPLTNIDPTWYYHKPGGGPLYDMTVYSLHALTGILGPARRVTALSGVRVRIREFRGAWHPVDADDNTLILIDFGDNLFALAYGTPAGTLTEGFSGSYFGTTGSIIGRKLNGQPFDYPGRADAEAHPHGDQILLPHVVGAHCEIEEQHVWEDIMQLIDWIRDGIPSIVTAEHARHVIEIIEAAYRAAETGQTRELHTTF
>NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein
MKLKHLIEPGDPERIAGGFEFTEGPVWHPDGFLIFSDIPANRQYRWHPTEGVSVWREPSGNSNGLTLDRQGYIIACEHGGRRVSRAKPGAEPVTLADRYDGKRLNSPNDVVVKSDGTIYFTDPPYGIAPEDREQPCNGVYRILPDGSIELLVDDFDRPNGLAFSPDETILYIDDSPRRHVRAFDVLPDGRLANSRIFADMDHPQPGSPDGMKVDREGNLYVTGATGVWVFEPDGTLLGVIVTPERPANCAWGDTDRQTLYITARTSLYRVRTRVPGIPVPR
>NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein
MTQSVSDPIAELQREIDALRIDRERDLRALNVLRTVSIACLGKPNARAIFEAMHQALLPVFRYDAAYFAVCDPGNRETFRAALLVDEESVEYLEHTPYGPLTGMLVQHRQPLLFYDLLHERTLLTPPPERFGNQQKHSRSWMGTPLLLGYETVGVMSIQSYRPGIYNQDHLDLLQRIGNLLAVALENAALVEQQQTLSNELTERIAARTRELTMLTALAEELAFQRPLSELLDRALSLLVDHLAMSGGAVRLLSSDGAELTLAAAYGFPPAYADQLARIPVASSLMRSVIEERRPLIIDNLAQSEHWQRLGLHYRSLIAVPLQIGDRALGSLLLVDTRQRAIQDQEIEFVRTVGHQIAIGIKTAQLLAERERQVAELSALSDISHAASTTLELRALLRHIARALARFMRADVFSVAVYDAERDVISDGFSIDDGEEHSFWQFQPPPSDSLTAWVLRNQRALRFDNLLDEIGRYPELRLHAIGTDRMALSWLGVPLIGREGQPIGVLTVQAYSPCAFDDRDERFLAAVARQVALHVQNVMLFAAEQEARRTADTLREVARVLSAAFSSGEVLNVILRELKKVIPYDSASIMLREGRVLRAAAVAPEHIATRLDAMDRPLNEPGAAVWVVHHKQPLLIEDVSVSHIWAPKPQISNIQSWIGVPLLVKGEVLGVLNIDSTQKGRFTQRDVEVAQVFADNAAIAIENARLYAESIARREQELEIARRIQSNLFPRELPRRQGIALAARCLPAREVGGDFFDCFALGERRSIAVMIGDASGKSVAGALLMAMARSVGRAEAFDHEEPALVLRETNRSVAHDVPRGTFVALCYATIDPSGRIAVANAGQLTPVLVHADGAIQYLYPPGPTLPLGIQSNIGYETLAIDLAPGDTVVFFTDGLVEAHNATGELFGFERLDALLTKEAGLPPDALIDRIIDEVIAFMGDTVQHDDMTLVVVQFGGERTND
>NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase
MLFFTVEKLKARLEEMRAAIIRDTRPITDVFTCPVPGAPSEHAMSPPPPPDDPSWRPLKVGERWGGDPHNPDKPDEPLPWGMPVDGGHTHWLRAIIRIPEEWRGRQVLMRMRWSAEGHAGIEGIAYLDGTTLAGIDEPHPAILLPEHAHEGDHELLIRCYTPYRRSFGGLELQLRSDIIARLAAVMYAILDALPTYRDSDPEKHALLDRINRAYNLLDLREGWQSERFEISAGAALTFLRETLTANLAPGQRPIILATGHAHMDVAWLWPLWRTHQKIAHTVATALHLMERYPEYHFSMSQPQTYAFLKQDDPELYERLRQRVAEGRFEPVGAMWLEPDCNVTGGESLVRQVIHGIRFFENEFGPIEHIVWLPDVFGYSAALPQIMRLAGISCFMTTKISWNQFNRMPYDTFRWRGIDGSEVLAHFVTATSAPVKPNPTEAQFYTYNGSMLPSEVFGTWNHYRQKDINDEVLYIYGHGDGGGGPTEEMLELARVMADLPGFPVVQPGRVEQYFQRLRQRVWNNPRLPVWVGELYLEYHRGTYTSQARTKQNNRQAELLLREAEWLNAWAVTHGAINRQADLDAAWRTVLLNQFHDILPGSSVPLVYVESEQQFAEVRDTVETVRHAAITDLTGSHSNGAAPHLAVFNGLAWDRTECVAIPLEDLRQPLIEGPTQVVEQIDGTRTLLVEATVPAFGYAALRAARHPSPPAQFITRRDYLASDEFRIEFDANGEIGSLYDARYEREIIAEGATGNQLVLYEDRPMFWDAWDIDPFYLEKPYPIHNISEWRVIEEGPLRATVEIARRFGRSTIRQRISLWHNNRRIDFETEVDWQERQNLLRVLFPLRLNAARATCEIQFGAVERPTHRNTSWDWARFEVCAHRWIDLSEGGYGVALLNNGKYGHSLLHNTLGISLLKSAVIPDPQADRGLHRFIYSLLPHAGDWREAQVTRRAYELNAPLRPVTVAGEIPAEGRSFLHVDSDHVIVETIKTADDGDGLIVRMYEAHNQRGQVRLEFGQPVESAVEVDLLERETGPVTVDGRTVRCNVRPFEIKTIRVRLKPPL
>NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase
MKTHPLTALQVIGVRYRGSTPAENDERALDAYAASGVYHAASVPTTISEPRMPATQRRIDEPSNLGWICRAIADDVAAAHARGRAPLIVGGDCTHAVGVVAGLQRSHGPNARIGLVWFDAHGDYNTPRTTLSGMLGGMPVAVCAGLALPQWRDLAGMQAPLPTDRIMLVDARNLDPPEEQLIRATETAIADVNDFAGPLASLAAACDVLYLHVDSDILEAALVPNHATREPDGPGLSEVSAAIDTVMATGKVGAFAVVSVYGAGPGSDISVASGTALIRAGLEAWARHGTV

Crispr_ID: NC_009767_72

• CRISPR_ID: NC_009767_72
• CRISPR_location: 3710648-3710763
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_72

Consensus_repeat	Method
TCATTCGCACAACACTGCCGGGGCGCTGCGGGCTAAAGCCC	CRISPRCasFinder

spacers of NC_009767_72

>72.1|3710689|34|NC_009767|CRISPRCasFinder
ATAACGCGCTGTGGAACGACACGCTGGTAAAAAT

CRISPR arrays and Neighbor proteins around NC_009767_72

CRISPR arrays

The CRISPR arrays of NC_009767_72

>merge|NC_009767|72|3710648-3710763|CRISPRCasFinder
TCATTCGCACAACACTGCCGGGGCGCTGCGGGCTAAAGCCCATAACGCGCTGTGGAACGACACGCTGGTAAAAATTCATTCGCACAACACTGCCGGGGCGCTGCGGGCTAAAGCCC

>NC_009767|72|63|3710648-3710763|CRISPRCasFinder
TCATTCGCACAACACTGCCGGGGCGCTGCGGGCTAAAGCCC	ATAACGCGCTGTGGAACGACACGCTGGTAAAAAT
TCATTCGCACAACACTGCCGGGGCGCTGCGGGCTAAAGCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|225118
NC_009767.1|WP_012121348.1|3705243_3707424_+|cell-shape-determining-protein	unknown	unknown	gnl|CDD|238050
NC_009767.1|WP_012121357.1|3718618_3718951_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl|CDD|367091
NC_009767.1|WP_083760373.1|3719371_3719641_+|DUF2442-domain-containing-protein	unknown	unknown	gnl|CDD|378424
NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase	unknown	unknown	gnl|CDD|212515
NC_009767.1|WP_012121350.1|3709079_3710528_+|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|223864
NC_009767.1|WP_012121354.1|3713985_3714195_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|198034
NC_009767.1|WP_049768839.1|3703517_3703802_+|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_012121352.1|3711730_3712171_+|DUF4190-domain-containing-protein	unknown	unknown	gnl|CDD|379388
NC_009767.1|WP_083760315.1|3703324_3703552_+|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_041330859.1|3716080_3716311_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121355.1|3714770_3715253_-|hypothetical-protein	unknown	unknown	gnl|CDD|226229
NC_009767.1|WP_041330866.1|3718409_3718634_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_083760316.1|3715463_3715865_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase	unknown	unknown	gnl|CDD|223460
NC_009767.1|WP_012121353.1|3712167_3713601_+|amidase	unknown	unknown	gnl|CDD|236028
NC_009767.1|WP_041330855.1|3703854_3704754_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NC_009767.1|WP_041330856.1|3707848_3709039_+|MFS-transporter	unknown	unknown	gnl|CDD|340951
NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl|CDD|225921
NC_009767.1|WP_012121351.1|3710884_3711694_+|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl|CDD|234710

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein	gnl|CDD|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	1.83717e-57
NC_009767.1|WP_012121348.1|3705243_3707424_+|cell-shape-determining-protein	gnl|CDD|238050	cd00102, IPT, Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.	2.02807e-06
NC_009767.1|WP_012121357.1|3718618_3718951_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	4.04356e-07
NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase	gnl|CDD|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	1.16758e-34
NC_009767.1|WP_012121350.1|3709079_3710528_+|PDZ-domain-containing-protein	gnl|CDD|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	1.53176e-62
NC_009767.1|WP_012121354.1|3713985_3714195_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl|CDD|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	1.8437e-10
NC_009767.1|WP_049768839.1|3703517_3703802_+|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	4.43993e-11
NC_009767.1|WP_012121352.1|3711730_3712171_+|DUF4190-domain-containing-protein	gnl|CDD|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	3.61912e-10
NC_009767.1|WP_083760315.1|3703324_3703552_+|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	7.14769e-19
NC_009767.1|WP_083760373.1|3719371_3719641_+|DUF2442-domain-containing-protein	gnl|CDD|378424	pfam10387, DUF2442, Protein of unknown function (DUF2442). This family of bacterial and fungal proteins has several members annotated as being putative molybdopterin-guanine dinucleotide biosynthesis protein A; however this could not be verified. Hence the function is not known. This family also includes the DUF3532 that was found to be related and was merged into this family. Members of this family also fall into the NE0471 N-terminal domain-like superfamily, a family of proteins with a unique fold in SCOP:143880.	4.55217e-25
NC_009767.1|WP_012121355.1|3714770_3715253_-|hypothetical-protein	gnl|CDD|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	0.000529074
NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase	gnl|CDD|223460	COG0383, AMS1, Alpha-mannosidase [Carbohydrate transport and metabolism].	9.0281e-177
NC_009767.1|WP_012121353.1|3712167_3713601_+|amidase	gnl|CDD|236028	PRK07486, PRK07486, amidase; Provisional.	0
NC_009767.1|WP_041330855.1|3703854_3704754_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.45086e-06
NC_009767.1|WP_041330856.1|3707848_3709039_+|MFS-transporter	gnl|CDD|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.29979e-42
NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein	gnl|CDD|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	6.15904e-74
NC_009767.1|WP_012121351.1|3710884_3711694_+|indole-3-glycerol-phosphate-synthase-TrpC	gnl|CDD|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	1.02997e-135

Protein sequences

>NC_009767.1|WP_012121350.1|3709079_3710528_+|PDZ-domain-containing-protein
MMTRCLRFVSALLVVVLAGCGNLPVPLGSMSTTTPTPLPTATSQPTVAPTDTPRPTPPATATPTLAPTATPTVTPYPLLPTPTLAPLSANERQAVFEDVWTLVRDRYVYEDYGGVDWDAVRAEFEPRIARAASEAEFYALIEEMIGRLGDDHTRFDTPQEVAEEAARFDGGVAYAGIGAMIRDLEEGILITRLAPGGPAEQAGLQPRDLIIAVNGVPVSDTITFGPGGPVSVVRGQPGTPVQLRIIDAAGATRDVTVIRQIIPPDAFPIVEARRVPGTDIGVVLIDTFNVSALDERVTDAIMSLYQSGPLDGLILDVRTNGGGRLDMLRRTLGLFLDGGTIGSSSGRERSFSIDVPSGKTLPLLEQMPIVVLTSDETASAAEMFAAGLQFRGRARVVGTPSAGNTENLIGYDLDDGSRFWLAELVFRLPDGSLLEGRGVQPDRIVEIDWWRYAFEDDPQIHAAVEELQLVGRSNDVAEVVER
>NC_009767.1|WP_041330856.1|3707848_3709039_+|MFS-transporter
MEPKTLANRLSAASIAWRPGIAMALLMGYFVLFGMTVGGQGVLWADIIHTLRISEGAFGSVQLLPPLIAMGLLVLGGPLTVRFGKKRLAITGLIVLGLSSLGLAAASDFLSFSIALALSGLGFGAVEMAMNSATLDWEQQTQRPVMNLMHAGFSGGAVTGAFAAGGLLQTGWIYAHVLWLLAAFCAIALLATLPVRYPPAAPTHTTHNGAGAALRLLIDRRALLAFAVLSMFGVVGESVANTWSVIYLRDLGAAAFVGGTAYALFNGTMFVGRLTNAPFVARFGARTSLLTSGTLVIIAGLLLIIPDSIPAAVAAFALAGLGVAGVVPTALSEAARHAPGSSGAVTGAIMAVTYLSFVVCAPLIGWIAELVSLQTALLTVALSGIGIVGLARGIAR
>NC_009767.1|WP_012121348.1|3705243_3707424_+|cell-shape-determining-protein
MRFISFNLFIRALTIVSFVVGLIGGIGLIPRPVRANVQPSCSTTPLFTNGSFITGTGNGASGANTSSPQGTDTGFGYLVDPTRTQTVPAGPARARLADDFTVTGNGWRPSAITLYAYQINSGTTSTITGVVDLRLWNGVPGDGGAVIAGPVNGTITNNNWTNVYRVPANDPTQTSRPIMAVTINWPFTVTTLLTGTYWIEWGMAGNESLSGPWVPPVSTGTTNNARQLDLTGGEPGTWAPRGDYTNTSNIVEFPFVICGSEIPTPQITSLSPNAVTAGSDEFTLTVNGNGFIDGTGSDRSVVHWNGSPRATTYISSTQLTATIPASDIATAGTASVTVVNPGNVTSNTETFTITNPTPAISSLSPSTAVAGSSGFTLTVTGTNFVNGSVVRWNGNDRTTTFVSGAQLTATIPASDIATAGTANVTVVNPAPGGGESGAATFTIINPTPTITAISPSSATAGGSGFTLTVTGTNFVNGSVVRWNGNDRATTVVSSTQLTATIPAGDIATAGTANVTVVNPAPGGGESGAATFTINNPTPTITAISPSSATAGGSGFTLTVTGTNFVNGSVVRWNGNDRATTVVSSTQLTATIPAGDIATAGTANVTVVNPGPGGGTSNTATFTIQASNPTPVIGSVSPDLIPVGDTDVVLTVTGNNFVANSVVRWNGTSLTTTFVSATQVQATLPSAQRSAAGDGSVTVFNPAPGGGVSNAITVPVRFQVMLPLVVR
>NC_009767.1|WP_041330855.1|3703854_3704754_+|GNAT-family-N-acetyltransferase
MAVTSRLYAGEDDYARMRQLLAEIEALEGPLVYCHVGDLDWWRFTDEDTHALATRIRLWFDHQGALVGFTWPSEHQVDLLVHPAYRAIEPAMLDWVEHLSRLDVDDPKPHVSVWSYEHDAYRNNLLMQRGYVRTDHFLSLSTRDLHEHVPEPEAPAGYTIRHVQGEADVHARVEAHRDAFASSRMSVAKYRAAIHAPTYRPDLDLIAVADDGSVAAFCTLWFDSINRIGEIEPLGCRAAHRRHGLARALVLEGLRRLQGYDAHLATVFYGSEPEDQPARQFYASLGFIERGRMYAWKRG
>NC_009767.1|WP_049768839.1|3703517_3703802_+|DUF4058-family-protein
MWRSLCPTRRFEIIDNNLSRFLVSDSTIIERDQQRSVTAATVAPAPVVGALEVEVETRYNRLEVRTVGDETAALASELLSPANKRSGADAADEA
>NC_009767.1|WP_083760315.1|3703324_3703552_+|DUF4058-family-protein
MTRRSTCPAPCAPLSTIQSFVEARMHSPFPGTDPYLKSMAIWPDVHAGLIAAMSRQFQPCLSPRYVAVIVPYTAF
>NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase
MKTHPLTALQVIGVRYRGSTPAENDERALDAYAASGVYHAASVPTTISEPRMPATQRRIDEPSNLGWICRAIADDVAAAHARGRAPLIVGGDCTHAVGVVAGLQRSHGPNARIGLVWFDAHGDYNTPRTTLSGMLGGMPVAVCAGLALPQWRDLAGMQAPLPTDRIMLVDARNLDPPEEQLIRATETAIADVNDFAGPLASLAAACDVLYLHVDSDILEAALVPNHATREPDGPGLSEVSAAIDTVMATGKVGAFAVVSVYGAGPGSDISVASGTALIRAGLEAWARHGTV
>NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase
MLFFTVEKLKARLEEMRAAIIRDTRPITDVFTCPVPGAPSEHAMSPPPPPDDPSWRPLKVGERWGGDPHNPDKPDEPLPWGMPVDGGHTHWLRAIIRIPEEWRGRQVLMRMRWSAEGHAGIEGIAYLDGTTLAGIDEPHPAILLPEHAHEGDHELLIRCYTPYRRSFGGLELQLRSDIIARLAAVMYAILDALPTYRDSDPEKHALLDRINRAYNLLDLREGWQSERFEISAGAALTFLRETLTANLAPGQRPIILATGHAHMDVAWLWPLWRTHQKIAHTVATALHLMERYPEYHFSMSQPQTYAFLKQDDPELYERLRQRVAEGRFEPVGAMWLEPDCNVTGGESLVRQVIHGIRFFENEFGPIEHIVWLPDVFGYSAALPQIMRLAGISCFMTTKISWNQFNRMPYDTFRWRGIDGSEVLAHFVTATSAPVKPNPTEAQFYTYNGSMLPSEVFGTWNHYRQKDINDEVLYIYGHGDGGGGPTEEMLELARVMADLPGFPVVQPGRVEQYFQRLRQRVWNNPRLPVWVGELYLEYHRGTYTSQARTKQNNRQAELLLREAEWLNAWAVTHGAINRQADLDAAWRTVLLNQFHDILPGSSVPLVYVESEQQFAEVRDTVETVRHAAITDLTGSHSNGAAPHLAVFNGLAWDRTECVAIPLEDLRQPLIEGPTQVVEQIDGTRTLLVEATVPAFGYAALRAARHPSPPAQFITRRDYLASDEFRIEFDANGEIGSLYDARYEREIIAEGATGNQLVLYEDRPMFWDAWDIDPFYLEKPYPIHNISEWRVIEEGPLRATVEIARRFGRSTIRQRISLWHNNRRIDFETEVDWQERQNLLRVLFPLRLNAARATCEIQFGAVERPTHRNTSWDWARFEVCAHRWIDLSEGGYGVALLNNGKYGHSLLHNTLGISLLKSAVIPDPQADRGLHRFIYSLLPHAGDWREAQVTRRAYELNAPLRPVTVAGEIPAEGRSFLHVDSDHVIVETIKTADDGDGLIVRMYEAHNQRGQVRLEFGQPVESAVEVDLLERETGPVTVDGRTVRCNVRPFEIKTIRVRLKPPL
>NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein
MTQSVSDPIAELQREIDALRIDRERDLRALNVLRTVSIACLGKPNARAIFEAMHQALLPVFRYDAAYFAVCDPGNRETFRAALLVDEESVEYLEHTPYGPLTGMLVQHRQPLLFYDLLHERTLLTPPPERFGNQQKHSRSWMGTPLLLGYETVGVMSIQSYRPGIYNQDHLDLLQRIGNLLAVALENAALVEQQQTLSNELTERIAARTRELTMLTALAEELAFQRPLSELLDRALSLLVDHLAMSGGAVRLLSSDGAELTLAAAYGFPPAYADQLARIPVASSLMRSVIEERRPLIIDNLAQSEHWQRLGLHYRSLIAVPLQIGDRALGSLLLVDTRQRAIQDQEIEFVRTVGHQIAIGIKTAQLLAERERQVAELSALSDISHAASTTLELRALLRHIARALARFMRADVFSVAVYDAERDVISDGFSIDDGEEHSFWQFQPPPSDSLTAWVLRNQRALRFDNLLDEIGRYPELRLHAIGTDRMALSWLGVPLIGREGQPIGVLTVQAYSPCAFDDRDERFLAAVARQVALHVQNVMLFAAEQEARRTADTLREVARVLSAAFSSGEVLNVILRELKKVIPYDSASIMLREGRVLRAAAVAPEHIATRLDAMDRPLNEPGAAVWVVHHKQPLLIEDVSVSHIWAPKPQISNIQSWIGVPLLVKGEVLGVLNIDSTQKGRFTQRDVEVAQVFADNAAIAIENARLYAESIARREQELEIARRIQSNLFPRELPRRQGIALAARCLPAREVGGDFFDCFALGERRSIAVMIGDASGKSVAGALLMAMARSVGRAEAFDHEEPALVLRETNRSVAHDVPRGTFVALCYATIDPSGRIAVANAGQLTPVLVHADGAIQYLYPPGPTLPLGIQSNIGYETLAIDLAPGDTVVFFTDGLVEAHNATGELFGFERLDALLTKEAGLPPDALIDRIIDEVIAFMGDTVQHDDMTLVVVQFGGERTND
>NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein
MKLKHLIEPGDPERIAGGFEFTEGPVWHPDGFLIFSDIPANRQYRWHPTEGVSVWREPSGNSNGLTLDRQGYIIACEHGGRRVSRAKPGAEPVTLADRYDGKRLNSPNDVVVKSDGTIYFTDPPYGIAPEDREQPCNGVYRILPDGSIELLVDDFDRPNGLAFSPDETILYIDDSPRRHVRAFDVLPDGRLANSRIFADMDHPQPGSPDGMKVDREGNLYVTGATGVWVFEPDGTLLGVIVTPERPANCAWGDTDRQTLYITARTSLYRVRTRVPGIPVPR
>NC_009767.1|WP_012121351.1|3710884_3711694_+|indole-3-glycerol-phosphate-synthase-TrpC
MDTMLNRILAHKRIEVERQRIKTPYDQMRTRAETAPPPRDFGAALRAHHPIALIAEVKKASPSKGVLIENFDPLALARTYASNGAAAISVLTDVRFFQGHLKYIEGIRALFDRGAAPPLPLLRKDFMIDPYQIVEARAYGADAVLLIVAALDDETLAALLALAGDLGMQALVEVHNADELRRALAVGARIIGVNNRDLHSFTTTLETTRHLAALLPSENRPLLVSESGIFTADHVALVRSWGVDAVLVGEALVTAPDIAGKVRELGGRL
>NC_009767.1|WP_012121352.1|3711730_3712171_+|DUF4190-domain-containing-protein
MCRFARFVACKSVFQAPASRHSAPAWLSTHHLPLHLFNPSFPRETASYAPDGYETSVPPISMAAIVSLVFDILGWFTAPVICSIIAIVAGHRAHREIAASNGRLGGSGRAKAGMIMGYIQLALVAFLCILFFVILLLTGIAGTGPR
>NC_009767.1|WP_012121353.1|3712167_3713601_+|amidase
MTDLHNLCFLTAVELMQRIRTHEVSCVEVMEAHLRQIERTNPQVNAIITLLPEQALERARAADTALHRGDEVGPLHGLPVAHKDLVQTKGVRTTFGSPIYADFVPDVDDLIVIRLRKAGAIMIGKTNTPEFGAGSQTFNPIFGATRNPYDLSKTCGGSSGGAAVALACGMIPIADGSDTGGSLRNPASFCNVVGFRPSPGRVPSCSDRAAWQTLSVLGPMARTVADTALMLSAIAGPHPCSPIALQKPGAHFRQPLERDFRGVRVAWSRTLGGLPVDPQVTAVLEEARPALEAIGCIVEEVEPDFSGADEAFRVWRAWSYEQSLGELADTHRDRLKETILGEIERGRALTGPQIGYAERLRTALYHRMRRFMKTYEFLALPTVQVPPFPVEQPYVTEISGVPMETYIDWMRSCYFISITSLPAISVPAGFTRDGLPVGLQLVGRYRNDFGVLQLAHAFEQATGHWRRRPPIVEMGHG
>NC_009767.1|WP_012121354.1|3713985_3714195_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MDTATISSKYQVVIPRAIREKWNVKPGQKVRFIVYGNRLEIVPVRDLKTARGFLRGMSSDIEREEEDRA
>NC_009767.1|WP_012121355.1|3714770_3715253_-|hypothetical-protein
MARVVCLSDTVSLVRLVREEATSCGHLLIPFPGSRLNDAFRQAVRQAMPDVVLFELTSTLDNPHIYFFLRSDQAMRSIPVIFLSPRPDLELLAAALGADGYLSLPLDRGALRATLRAYLDIPAPVDVLRIEVPRSTVQRYAALMQRPPVMAQVAAGLPVV
>NC_009767.1|WP_083760316.1|3715463_3715865_-|hypothetical-protein
MLLPVWATWLFFALLVEVGDAVAEERMRPVDQISREMVFRGLYHVTQAWRRGEAADPIKYVSAPDNRDLGVVKRLRKKHPPDPAFSTASVMTNGLYQFPVTIRHGHPEQREGSCANPLGFLAEFTLSEAKGSE
>NC_009767.1|WP_041330859.1|3716080_3716311_-|hypothetical-protein
MARAQSNSQSLAQGEIRSTDGLPIVNPHAAGADIGAEQMYVCLPGPERTHIVRSFGAYTADLQRSPSGSSRTASRR
>NC_009767.1|WP_041330866.1|3718409_3718634_+|hypothetical-protein
MQTVTVPEIVEHLQRLSPEKLVVVYDFVSYLLERETGQTLSRTASEAFQPMLASEPVLRRDWERPEEDLAWANL
>NC_009767.1|WP_012121357.1|3718618_3718951_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MGKFVKGDVVVVPFPFSDLSAAKRRPALVVATLTGDDVILCQITSKAITDNDALAISDSDFTSGGLRQDSNVRPNRIFTADSNIVLYRAGVLSPKKVQEVIAKIIQIISA
>NC_009767.1|WP_083760373.1|3719371_3719641_+|DUF2442-domain-containing-protein
MIHVLVTDDTLSVDLEDGRTISVPIGWYPRLAHGTPEERAHFQISGAGYGIHWPDLDEDIGIEGLVLGKRSTESPASFERWLQQHKKQG

Crispr_ID: NC_009767_71

• CRISPR_ID: NC_009767_71
• CRISPR_location: 3707693-3707816
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_71

Consensus_repeat	Method
CCTGCTGCCAGATGTTGCGACATCGTTGCCTGTGGTATCATAACC	CRISPRCasFinder

spacers of NC_009767_71

>71.1|3707738|34|NC_009767|CRISPRCasFinder
CGCACGGCGCACCGGTCTGGACGGGGCGCATTGA

CRISPR arrays and Neighbor proteins around NC_009767_71

CRISPR arrays

The CRISPR arrays of NC_009767_71

>merge|NC_009767|71|3707693-3707816|CRISPRCasFinder
CCTGCTGCCAGATGTTGCGACATCGTTGCCTGTGGTATCATAACCCGCACGGCGCACCGGTCTGGACGGGGCGCATTGACCTGCTGCCAGATGTTGCGACATCGTTGCCTGTGGTATCATAACC

>NC_009767|71|62|3707693-3707816|CRISPRCasFinder
CCTGCTGCCAGATGTTGCGACATCGTTGCCTGTGGTATCATAACC	CGCACGGCGCACCGGTCTGGACGGGGCGCATTGA
CCTGCTGCCAGATGTTGCGACATCGTTGCCTGTGGTATCATAACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|225118
NC_009767.1|WP_012121348.1|3705243_3707424_+|cell-shape-determining-protein	unknown	unknown	gnl|CDD|238050
NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase	unknown	unknown	gnl|CDD|212515
NC_009767.1|WP_012121350.1|3709079_3710528_+|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|223864
NC_009767.1|WP_012121354.1|3713985_3714195_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|198034
NC_009767.1|WP_049768839.1|3703517_3703802_+|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_012121352.1|3711730_3712171_+|DUF4190-domain-containing-protein	unknown	unknown	gnl|CDD|379388
NC_009767.1|WP_083760315.1|3703324_3703552_+|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009767.1|WP_041330859.1|3716080_3716311_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121355.1|3714770_3715253_-|hypothetical-protein	unknown	unknown	gnl|CDD|226229
NC_009767.1|WP_012121341.1|3690306_3692166_+|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl|CDD|235256
NC_009767.1|WP_041330866.1|3718409_3718634_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_083760316.1|3715463_3715865_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase	unknown	unknown	gnl|CDD|223460
NC_009767.1|WP_012121353.1|3712167_3713601_+|amidase	unknown	unknown	gnl|CDD|236028
NC_009767.1|WP_041330855.1|3703854_3704754_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NC_009767.1|WP_041330856.1|3707848_3709039_+|MFS-transporter	unknown	unknown	gnl|CDD|340951
NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl|CDD|225921
NC_009767.1|WP_012121351.1|3710884_3711694_+|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl|CDD|234710
NC_009767.1|WP_012121342.1|3692384_3693503_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein	gnl|CDD|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	1.83717e-57
NC_009767.1|WP_012121348.1|3705243_3707424_+|cell-shape-determining-protein	gnl|CDD|238050	cd00102, IPT, Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.	2.02807e-06
NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase	gnl|CDD|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	1.16758e-34
NC_009767.1|WP_012121350.1|3709079_3710528_+|PDZ-domain-containing-protein	gnl|CDD|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	1.53176e-62
NC_009767.1|WP_012121354.1|3713985_3714195_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl|CDD|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	1.8437e-10
NC_009767.1|WP_049768839.1|3703517_3703802_+|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	4.43993e-11
NC_009767.1|WP_012121352.1|3711730_3712171_+|DUF4190-domain-containing-protein	gnl|CDD|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	3.61912e-10
NC_009767.1|WP_083760315.1|3703324_3703552_+|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	7.14769e-19
NC_009767.1|WP_012121355.1|3714770_3715253_-|hypothetical-protein	gnl|CDD|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	0.000529074
NC_009767.1|WP_012121341.1|3690306_3692166_+|phosphoenolpyruvate-carboxykinase-(GTP)	gnl|CDD|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase	gnl|CDD|223460	COG0383, AMS1, Alpha-mannosidase [Carbohydrate transport and metabolism].	9.0281e-177
NC_009767.1|WP_012121353.1|3712167_3713601_+|amidase	gnl|CDD|236028	PRK07486, PRK07486, amidase; Provisional.	0
NC_009767.1|WP_041330855.1|3703854_3704754_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.45086e-06
NC_009767.1|WP_041330856.1|3707848_3709039_+|MFS-transporter	gnl|CDD|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.29979e-42
NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein	gnl|CDD|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	6.15904e-74
NC_009767.1|WP_012121351.1|3710884_3711694_+|indole-3-glycerol-phosphate-synthase-TrpC	gnl|CDD|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	1.02997e-135
NC_009767.1|WP_012121342.1|3692384_3693503_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.59785e-54

Protein sequences

>NC_009767.1|WP_012121348.1|3705243_3707424_+|cell-shape-determining-protein
MRFISFNLFIRALTIVSFVVGLIGGIGLIPRPVRANVQPSCSTTPLFTNGSFITGTGNGASGANTSSPQGTDTGFGYLVDPTRTQTVPAGPARARLADDFTVTGNGWRPSAITLYAYQINSGTTSTITGVVDLRLWNGVPGDGGAVIAGPVNGTITNNNWTNVYRVPANDPTQTSRPIMAVTINWPFTVTTLLTGTYWIEWGMAGNESLSGPWVPPVSTGTTNNARQLDLTGGEPGTWAPRGDYTNTSNIVEFPFVICGSEIPTPQITSLSPNAVTAGSDEFTLTVNGNGFIDGTGSDRSVVHWNGSPRATTYISSTQLTATIPASDIATAGTASVTVVNPGNVTSNTETFTITNPTPAISSLSPSTAVAGSSGFTLTVTGTNFVNGSVVRWNGNDRTTTFVSGAQLTATIPASDIATAGTANVTVVNPAPGGGESGAATFTIINPTPTITAISPSSATAGGSGFTLTVTGTNFVNGSVVRWNGNDRATTVVSSTQLTATIPAGDIATAGTANVTVVNPAPGGGESGAATFTINNPTPTITAISPSSATAGGSGFTLTVTGTNFVNGSVVRWNGNDRATTVVSSTQLTATIPAGDIATAGTANVTVVNPGPGGGTSNTATFTIQASNPTPVIGSVSPDLIPVGDTDVVLTVTGNNFVANSVVRWNGTSLTTTFVSATQVQATLPSAQRSAAGDGSVTVFNPAPGGGVSNAITVPVRFQVMLPLVVR
>NC_009767.1|WP_041330855.1|3703854_3704754_+|GNAT-family-N-acetyltransferase
MAVTSRLYAGEDDYARMRQLLAEIEALEGPLVYCHVGDLDWWRFTDEDTHALATRIRLWFDHQGALVGFTWPSEHQVDLLVHPAYRAIEPAMLDWVEHLSRLDVDDPKPHVSVWSYEHDAYRNNLLMQRGYVRTDHFLSLSTRDLHEHVPEPEAPAGYTIRHVQGEADVHARVEAHRDAFASSRMSVAKYRAAIHAPTYRPDLDLIAVADDGSVAAFCTLWFDSINRIGEIEPLGCRAAHRRHGLARALVLEGLRRLQGYDAHLATVFYGSEPEDQPARQFYASLGFIERGRMYAWKRG
>NC_009767.1|WP_049768839.1|3703517_3703802_+|DUF4058-family-protein
MWRSLCPTRRFEIIDNNLSRFLVSDSTIIERDQQRSVTAATVAPAPVVGALEVEVETRYNRLEVRTVGDETAALASELLSPANKRSGADAADEA
>NC_009767.1|WP_083760315.1|3703324_3703552_+|DUF4058-family-protein
MTRRSTCPAPCAPLSTIQSFVEARMHSPFPGTDPYLKSMAIWPDVHAGLIAAMSRQFQPCLSPRYVAVIVPYTAF
>NC_009767.1|WP_041332052.1|3702294_3703170_+|arginase
MKTHPLTALQVIGVRYRGSTPAENDERALDAYAASGVYHAASVPTTISEPRMPATQRRIDEPSNLGWICRAIADDVAAAHARGRAPLIVGGDCTHAVGVVAGLQRSHGPNARIGLVWFDAHGDYNTPRTTLSGMLGGMPVAVCAGLALPQWRDLAGMQAPLPTDRIMLVDARNLDPPEEQLIRATETAIADVNDFAGPLASLAAACDVLYLHVDSDILEAALVPNHATREPDGPGLSEVSAAIDTVMATGKVGAFAVVSVYGAGPGSDISVASGTALIRAGLEAWARHGTV
>NC_009767.1|WP_012121345.1|3698491_3701677_+|alpha-mannosidase
MLFFTVEKLKARLEEMRAAIIRDTRPITDVFTCPVPGAPSEHAMSPPPPPDDPSWRPLKVGERWGGDPHNPDKPDEPLPWGMPVDGGHTHWLRAIIRIPEEWRGRQVLMRMRWSAEGHAGIEGIAYLDGTTLAGIDEPHPAILLPEHAHEGDHELLIRCYTPYRRSFGGLELQLRSDIIARLAAVMYAILDALPTYRDSDPEKHALLDRINRAYNLLDLREGWQSERFEISAGAALTFLRETLTANLAPGQRPIILATGHAHMDVAWLWPLWRTHQKIAHTVATALHLMERYPEYHFSMSQPQTYAFLKQDDPELYERLRQRVAEGRFEPVGAMWLEPDCNVTGGESLVRQVIHGIRFFENEFGPIEHIVWLPDVFGYSAALPQIMRLAGISCFMTTKISWNQFNRMPYDTFRWRGIDGSEVLAHFVTATSAPVKPNPTEAQFYTYNGSMLPSEVFGTWNHYRQKDINDEVLYIYGHGDGGGGPTEEMLELARVMADLPGFPVVQPGRVEQYFQRLRQRVWNNPRLPVWVGELYLEYHRGTYTSQARTKQNNRQAELLLREAEWLNAWAVTHGAINRQADLDAAWRTVLLNQFHDILPGSSVPLVYVESEQQFAEVRDTVETVRHAAITDLTGSHSNGAAPHLAVFNGLAWDRTECVAIPLEDLRQPLIEGPTQVVEQIDGTRTLLVEATVPAFGYAALRAARHPSPPAQFITRRDYLASDEFRIEFDANGEIGSLYDARYEREIIAEGATGNQLVLYEDRPMFWDAWDIDPFYLEKPYPIHNISEWRVIEEGPLRATVEIARRFGRSTIRQRISLWHNNRRIDFETEVDWQERQNLLRVLFPLRLNAARATCEIQFGAVERPTHRNTSWDWARFEVCAHRWIDLSEGGYGVALLNNGKYGHSLLHNTLGISLLKSAVIPDPQADRGLHRFIYSLLPHAGDWREAQVTRRAYELNAPLRPVTVAGEIPAEGRSFLHVDSDHVIVETIKTADDGDGLIVRMYEAHNQRGQVRLEFGQPVESAVEVDLLERETGPVTVDGRTVRCNVRPFEIKTIRVRLKPPL
>NC_009767.1|WP_012121344.1|3694857_3697743_+|GAF-domain-containing-protein
MTQSVSDPIAELQREIDALRIDRERDLRALNVLRTVSIACLGKPNARAIFEAMHQALLPVFRYDAAYFAVCDPGNRETFRAALLVDEESVEYLEHTPYGPLTGMLVQHRQPLLFYDLLHERTLLTPPPERFGNQQKHSRSWMGTPLLLGYETVGVMSIQSYRPGIYNQDHLDLLQRIGNLLAVALENAALVEQQQTLSNELTERIAARTRELTMLTALAEELAFQRPLSELLDRALSLLVDHLAMSGGAVRLLSSDGAELTLAAAYGFPPAYADQLARIPVASSLMRSVIEERRPLIIDNLAQSEHWQRLGLHYRSLIAVPLQIGDRALGSLLLVDTRQRAIQDQEIEFVRTVGHQIAIGIKTAQLLAERERQVAELSALSDISHAASTTLELRALLRHIARALARFMRADVFSVAVYDAERDVISDGFSIDDGEEHSFWQFQPPPSDSLTAWVLRNQRALRFDNLLDEIGRYPELRLHAIGTDRMALSWLGVPLIGREGQPIGVLTVQAYSPCAFDDRDERFLAAVARQVALHVQNVMLFAAEQEARRTADTLREVARVLSAAFSSGEVLNVILRELKKVIPYDSASIMLREGRVLRAAAVAPEHIATRLDAMDRPLNEPGAAVWVVHHKQPLLIEDVSVSHIWAPKPQISNIQSWIGVPLLVKGEVLGVLNIDSTQKGRFTQRDVEVAQVFADNAAIAIENARLYAESIARREQELEIARRIQSNLFPRELPRRQGIALAARCLPAREVGGDFFDCFALGERRSIAVMIGDASGKSVAGALLMAMARSVGRAEAFDHEEPALVLRETNRSVAHDVPRGTFVALCYATIDPSGRIAVANAGQLTPVLVHADGAIQYLYPPGPTLPLGIQSNIGYETLAIDLAPGDTVVFFTDGLVEAHNATGELFGFERLDALLTKEAGLPPDALIDRIIDEVIAFMGDTVQHDDMTLVVVQFGGERTND
>NC_009767.1|WP_012121343.1|3693872_3694718_-|SMP-30/gluconolactonase/LRE-family-protein
MKLKHLIEPGDPERIAGGFEFTEGPVWHPDGFLIFSDIPANRQYRWHPTEGVSVWREPSGNSNGLTLDRQGYIIACEHGGRRVSRAKPGAEPVTLADRYDGKRLNSPNDVVVKSDGTIYFTDPPYGIAPEDREQPCNGVYRILPDGSIELLVDDFDRPNGLAFSPDETILYIDDSPRRHVRAFDVLPDGRLANSRIFADMDHPQPGSPDGMKVDREGNLYVTGATGVWVFEPDGTLLGVIVTPERPANCAWGDTDRQTLYITARTSLYRVRTRVPGIPVPR
>NC_009767.1|WP_012121342.1|3692384_3693503_+|Gfo/Idh/MocA-family-oxidoreductase
MHDTVVRFGVVGAGSVAVRGLLPHLSQPDMRDRVRLVAVCDPAPGRAAAAAARFGCEHAFTDYDDMLAAGVVDAITIATPIGLHYEQGRKALDAGLHVHFNKTMTTTVAEASDLIERAAVRGLKIVASPGEMLRPHNQRIKQLIAEGAIGTLCWAACGAAFGRYHEEESVRHGADPLTNIDPTWYYHKPGGGPLYDMTVYSLHALTGILGPARRVTALSGVRVRIREFRGAWHPVDADDNTLILIDFGDNLFALAYGTPAGTLTEGFSGSYFGTTGSIIGRKLNGQPFDYPGRADAEAHPHGDQILLPHVVGAHCEIEEQHVWEDIMQLIDWIRDGIPSIVTAEHARHVIEIIEAAYRAAETGQTRELHTTF
>NC_009767.1|WP_012121341.1|3690306_3692166_+|phosphoenolpyruvate-carboxykinase-(GTP)
METSVMEVPAYVTNEKLIRWVQEMVDLCKPDRVHWCDGSKAEYDALCEQLVQSGTFTRLNQEKWPGCFLARSDPSDVARVEDRTFICSVSRNDAGPTNNWMAPREMKETLIPLFDGSMRGRTMYVIPFCMGPIGSPLAQIGVELTDSAYVVVNMWIMTRIGKKVIEALGNNDFVPCLHSVGAPLAPGQKDVPWPCNPTVKYIVHFPEERMIWSYGSGYGGNALLGKKCLALRIASVIARDEGWLAEHMLILGVKDPKGRKTYVAAAFPSACGKTNFAMLIPPKPFQEEGWEVTTVGDDIAWIKPGPDGRLYAINPESGYFGVAPGTSYDTNPNAMVALSRNTIFTNVALTPDGGVWWEGMTKEPPPEAIDWQGKHWTPDSGRKAAHPNARFTAPAAQNPAIDPDWENPQGVPIRAFIFGGRRSMVVPLVYQSFNWTFGVYLAATMGSEMTAAAFGKIGEVRRDPMAMLPFCGYHMGDYFNHWLQFGRTIPNPPRIFSVNWFRKDAEGNFLWPGFGENMRVLKWIVERANGRAVGIESPIGWMPRYDDIDWRGLENFSEEKFTELMAVDRDQWSQEILLHEELFLKLYDRLPKEFRSVRDLLLSALWRSPEHWDLLDGGH
>NC_009767.1|WP_041330856.1|3707848_3709039_+|MFS-transporter
MEPKTLANRLSAASIAWRPGIAMALLMGYFVLFGMTVGGQGVLWADIIHTLRISEGAFGSVQLLPPLIAMGLLVLGGPLTVRFGKKRLAITGLIVLGLSSLGLAAASDFLSFSIALALSGLGFGAVEMAMNSATLDWEQQTQRPVMNLMHAGFSGGAVTGAFAAGGLLQTGWIYAHVLWLLAAFCAIALLATLPVRYPPAAPTHTTHNGAGAALRLLIDRRALLAFAVLSMFGVVGESVANTWSVIYLRDLGAAAFVGGTAYALFNGTMFVGRLTNAPFVARFGARTSLLTSGTLVIIAGLLLIIPDSIPAAVAAFALAGLGVAGVVPTALSEAARHAPGSSGAVTGAIMAVTYLSFVVCAPLIGWIAELVSLQTALLTVALSGIGIVGLARGIAR
>NC_009767.1|WP_012121350.1|3709079_3710528_+|PDZ-domain-containing-protein
MMTRCLRFVSALLVVVLAGCGNLPVPLGSMSTTTPTPLPTATSQPTVAPTDTPRPTPPATATPTLAPTATPTVTPYPLLPTPTLAPLSANERQAVFEDVWTLVRDRYVYEDYGGVDWDAVRAEFEPRIARAASEAEFYALIEEMIGRLGDDHTRFDTPQEVAEEAARFDGGVAYAGIGAMIRDLEEGILITRLAPGGPAEQAGLQPRDLIIAVNGVPVSDTITFGPGGPVSVVRGQPGTPVQLRIIDAAGATRDVTVIRQIIPPDAFPIVEARRVPGTDIGVVLIDTFNVSALDERVTDAIMSLYQSGPLDGLILDVRTNGGGRLDMLRRTLGLFLDGGTIGSSSGRERSFSIDVPSGKTLPLLEQMPIVVLTSDETASAAEMFAAGLQFRGRARVVGTPSAGNTENLIGYDLDDGSRFWLAELVFRLPDGSLLEGRGVQPDRIVEIDWWRYAFEDDPQIHAAVEELQLVGRSNDVAEVVER
>NC_009767.1|WP_012121351.1|3710884_3711694_+|indole-3-glycerol-phosphate-synthase-TrpC
MDTMLNRILAHKRIEVERQRIKTPYDQMRTRAETAPPPRDFGAALRAHHPIALIAEVKKASPSKGVLIENFDPLALARTYASNGAAAISVLTDVRFFQGHLKYIEGIRALFDRGAAPPLPLLRKDFMIDPYQIVEARAYGADAVLLIVAALDDETLAALLALAGDLGMQALVEVHNADELRRALAVGARIIGVNNRDLHSFTTTLETTRHLAALLPSENRPLLVSESGIFTADHVALVRSWGVDAVLVGEALVTAPDIAGKVRELGGRL
>NC_009767.1|WP_012121352.1|3711730_3712171_+|DUF4190-domain-containing-protein
MCRFARFVACKSVFQAPASRHSAPAWLSTHHLPLHLFNPSFPRETASYAPDGYETSVPPISMAAIVSLVFDILGWFTAPVICSIIAIVAGHRAHREIAASNGRLGGSGRAKAGMIMGYIQLALVAFLCILFFVILLLTGIAGTGPR
>NC_009767.1|WP_012121353.1|3712167_3713601_+|amidase
MTDLHNLCFLTAVELMQRIRTHEVSCVEVMEAHLRQIERTNPQVNAIITLLPEQALERARAADTALHRGDEVGPLHGLPVAHKDLVQTKGVRTTFGSPIYADFVPDVDDLIVIRLRKAGAIMIGKTNTPEFGAGSQTFNPIFGATRNPYDLSKTCGGSSGGAAVALACGMIPIADGSDTGGSLRNPASFCNVVGFRPSPGRVPSCSDRAAWQTLSVLGPMARTVADTALMLSAIAGPHPCSPIALQKPGAHFRQPLERDFRGVRVAWSRTLGGLPVDPQVTAVLEEARPALEAIGCIVEEVEPDFSGADEAFRVWRAWSYEQSLGELADTHRDRLKETILGEIERGRALTGPQIGYAERLRTALYHRMRRFMKTYEFLALPTVQVPPFPVEQPYVTEISGVPMETYIDWMRSCYFISITSLPAISVPAGFTRDGLPVGLQLVGRYRNDFGVLQLAHAFEQATGHWRRRPPIVEMGHG
>NC_009767.1|WP_012121354.1|3713985_3714195_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MDTATISSKYQVVIPRAIREKWNVKPGQKVRFIVYGNRLEIVPVRDLKTARGFLRGMSSDIEREEEDRA
>NC_009767.1|WP_012121355.1|3714770_3715253_-|hypothetical-protein
MARVVCLSDTVSLVRLVREEATSCGHLLIPFPGSRLNDAFRQAVRQAMPDVVLFELTSTLDNPHIYFFLRSDQAMRSIPVIFLSPRPDLELLAAALGADGYLSLPLDRGALRATLRAYLDIPAPVDVLRIEVPRSTVQRYAALMQRPPVMAQVAAGLPVV
>NC_009767.1|WP_083760316.1|3715463_3715865_-|hypothetical-protein
MLLPVWATWLFFALLVEVGDAVAEERMRPVDQISREMVFRGLYHVTQAWRRGEAADPIKYVSAPDNRDLGVVKRLRKKHPPDPAFSTASVMTNGLYQFPVTIRHGHPEQREGSCANPLGFLAEFTLSEAKGSE
>NC_009767.1|WP_041330859.1|3716080_3716311_-|hypothetical-protein
MARAQSNSQSLAQGEIRSTDGLPIVNPHAAGADIGAEQMYVCLPGPERTHIVRSFGAYTADLQRSPSGSSRTASRR
>NC_009767.1|WP_041330866.1|3718409_3718634_+|hypothetical-protein
MQTVTVPEIVEHLQRLSPEKLVVVYDFVSYLLERETGQTLSRTASEAFQPMLASEPVLRRDWERPEEDLAWANL

Crispr_ID: NC_009767_73

• CRISPR_ID: NC_009767_73
• CRISPR_location: 3771145-3771236
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_73

Consensus_repeat	Method
GCCGCCCGCGCTTCGGCTTCCGCCCGCGCCGC	CRISPRCasFinder

spacers of NC_009767_73

>73.1|3771177|28|NC_009767|CRISPRCasFinder
TGCCTCCGCCGCCGCCCGCGCTTCGGCT

CRISPR arrays and Neighbor proteins around NC_009767_73

CRISPR arrays

The CRISPR arrays of NC_009767_73

>merge|NC_009767|73|3771145-3771236|CRISPRCasFinder
GCCGCCCGCGCTTCGGCTTCCGCCCGCGCCGCTGCCTCCGCCGCCGCCCGCGCTTCGGCTTCCGCCCGCGCCGCCGCCTCCGCCGCCGCCCG

>NC_009767|73|64|3771145-3771236|CRISPRCasFinder
GCCGCCCGCGCTTCGGCTTCCGCCCGCGCCGC	TGCCTCCGCCGCCGCCCGCGCTTCGGCT
TCCGCCCGCGCCGCCGCCTCCGCCGCCGCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121398.1|3774147_3775104_-|MoxR-family-ATPase	unknown	unknown	gnl|CDD|223786
NC_009767.1|WP_012121400.1|3776014_3776890_-|DUF4129-domain-containing-protein	unknown	unknown	gnl|CDD|379261
NC_009767.1|WP_012121393.1|3769505_3770522_-|ATP-phosphoribosyltransferase	unknown	unknown	gnl|CDD|270311
NC_009767.1|WP_012121385.1|3760605_3761154_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	unknown	unknown	gnl|CDD|235777
NC_009767.1|WP_012121403.1|3780226_3781180_+|A/G-specific-adenine-glycosylase	unknown	unknown	gnl|CDD|224115
NC_009767.1|WP_012121401.1|3776893_3778348_-|ATP-phosphoribosyltransferase-regulatory-subunit	unknown	unknown	gnl|CDD|223202
NC_009767.1|WP_012121391.1|3767751_3768009_-|YggT-family-protein	unknown	unknown	gnl|CDD|376765
NC_009767.1|WP_012121405.1|3782336_3782960_+|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl|CDD|237288
NC_009767.1|WP_012121389.1|3764953_3765877_-|transporter	unknown	unknown	gnl|CDD|223751
NC_009767.1|WP_012121404.1|3781213_3782251_+|histone-deacetylase	unknown	unknown	gnl|CDD|212518
NC_009767.1|WP_157042662.1|3770521_3771049_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121397.1|3772891_3774151_-|DUF58-domain-containing-protein	unknown	unknown	gnl|CDD|224635
NC_009767.1|WP_012121392.1|3768162_3769506_-|histidinol-dehydrogenase	unknown	unknown	gnl|CDD|376389
NC_009767.1|WP_012121399.1|3775119_3775701_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121386.1|3761204_3762386_+|exodeoxyribonuclease-VII-large-subunit	unknown	unknown	gnl|CDD|272979
NC_009767.1|WP_012121390.1|3765981_3767637_-|spermidine-synthase	unknown	unknown	gnl|CDD|223498
NC_009767.1|WP_012121402.1|3778448_3780179_-|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NC_009767.1|WP_012121396.1|3772023_3772821_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012121387.1|3762607_3762850_+|exodeoxyribonuclease-VII-small-subunit	unknown	unknown	gnl|CDD|179195
NC_009767.1|WP_012121388.1|3762846_3764721_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121398.1|3774147_3775104_-|MoxR-family-ATPase	gnl|CDD|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	2.13283e-99
NC_009767.1|WP_012121400.1|3776014_3776890_-|DUF4129-domain-containing-protein	gnl|CDD|379261	pfam13559, DUF4129, Domain of unknown function (DUF4129). This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.	1.53723e-12
NC_009767.1|WP_012121393.1|3769505_3770522_-|ATP-phosphoribosyltransferase	gnl|CDD|270311	cd13593, PBP2_HisGL3, The catalytic domain of hexameric long form HisGL3; contains the type 2 periplasmic binding protein fold. Encoded by the hisG gene, the ATP phosphoribosyltransferase (ATP-PRT, EC 2.4.2.17) is the first enzyme in histidine biosynthetic pathway that catalyzes the condensation of ATP and PRPP (5'-phosphoribosyl 1'-pyrophosphate), and is regulated by a feedback inhibition from the product histidine. ATP-PRT has two distinct forms: a hexameric long form, HisGL, containing two catalytic domains and a C-terminal regulatory domain; and a hetero-octomeric short form, HisGs, without the regulatory domain. HisGL is catalytically competent, but the hetero-octameric HisGs requires the second subunit HisZ, a paralog to the catalytic domain of functional histidyl-tRNA synthetases (HisRSs), for the enzyme activity. This catalytic domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea.	2.72495e-96
NC_009767.1|WP_012121385.1|3760605_3761154_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	gnl|CDD|235777	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein.	3.63298e-50
NC_009767.1|WP_012121403.1|3780226_3781180_+|A/G-specific-adenine-glycosylase	gnl|CDD|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	6.60214e-93
NC_009767.1|WP_012121401.1|3776893_3778348_-|ATP-phosphoribosyltransferase-regulatory-subunit	gnl|CDD|223202	COG0124, HisS, Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].	1.513e-106
NC_009767.1|WP_012121391.1|3767751_3768009_-|YggT-family-protein	gnl|CDD|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	1.87239e-10
NC_009767.1|WP_012121389.1|3764953_3765877_-|transporter	gnl|CDD|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.94673e-33
NC_009767.1|WP_012121404.1|3781213_3782251_+|histone-deacetylase	gnl|CDD|212518	cd09992, HDAC_classII, Histone deacetylases and histone-like deacetylases, classII. Class II histone deacetylases are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues of histones (EC 3.5.1.98) and possibly other proteins to yield deacetylated histones/other proteins. This group includes animal HDAC4,5,6,7,8,9,10, fungal HOS3 and HDA1, plant HDA5 and HDA15 as well as other eukaryotes, archaeal and bacterial histone-like deacetylases. Eukaryotic deacetylases mostly use histones (H2, H3, H4) as substrates for deacetylation; however, non-histone substrates are known (for example, tubulin). Substrates for prokaryotic histone-like deacetylases are not known. Histone acetylation/deacetylation process is important for mediation of transcriptional regulation of many genes. Histone deacetylases usually act via association with DNA binding proteins to target specific chromatin regions. Interaction partners of class II deacetylases include 14-3-3 proteins, MEF2 family of transcriptional factors, CtBP, calmodulin (CaM), SMRT, N-CoR, BCL6, HP1alpha and SUMO. Histone deacetylases play a role in the regulation of cell cycle, cell differentiation and survival. Class II mammalian HDACs are differentially inhibited by structurally diverse compounds with known antitumor activities, thus presenting them as potential drug targets for human diseases resulting from aberrant acetylation.	2.55006e-154
NC_009767.1|WP_012121405.1|3782336_3782960_+|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl|CDD|237288	PRK13141, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional.	9.75175e-118
NC_009767.1|WP_012121397.1|3772891_3774151_-|DUF58-domain-containing-protein	gnl|CDD|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	2.49125e-43
NC_009767.1|WP_012121386.1|3761204_3762386_+|exodeoxyribonuclease-VII-large-subunit	gnl|CDD|272979	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits. [DNA metabolism, Degradation of DNA].	0
NC_009767.1|WP_012121390.1|3765981_3767637_-|spermidine-synthase	gnl|CDD|223498	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism].	8.74632e-19
NC_009767.1|WP_012121402.1|3778448_3780179_-|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.2411e-46
NC_009767.1|WP_012121396.1|3772023_3772821_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.83725e-15
NC_009767.1|WP_012121387.1|3762607_3762850_+|exodeoxyribonuclease-VII-small-subunit	gnl|CDD|179195	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional.	5.32803e-13
NC_009767.1|WP_012121392.1|3768162_3769506_-|histidinol-dehydrogenase	gnl|CDD|376389	pfam00815, Histidinol_dh, Histidinol dehydrogenase.	0

Protein sequences

>NC_009767.1|WP_157042662.1|3770521_3771049_-|hypothetical-protein
MRTLHSIGIVAVIGAIALATACLTGGLIVSGETLFALASAALGGIWVAGVVLQRCWTRVVALPGMLIVAVGTTFVQVAPFVSLAGLVMTLVAWNLDDLERRLNQAGRVVDEHALRRIHTARLLLVAGASLGVGGVASVVRFEIGAIGALILGALAVLGLSRIVTLLRRMTQDWRQ
>NC_009767.1|WP_012121393.1|3769505_3770522_-|ATP-phosphoribosyltransferase
MTLRFAIPSKGSLYDGTIAFLESAGLRVSRPNPRRYTASIRALPGADVLLHRPTDIVEKVAAGEIDLGISGLDLVEELHGDRDDLIVLFDDLGYGAAELVVAVPETWIDVTSWHDLADLAVELHSQGRLLRIATKYPSLTRRFCYANGINYFRLVESQGATEAAPGLGYADIIVDITETGVTLRDNQLKIVGDPILRTQACLIASRRCLRANPAALEATRTVLELVEARRRARRFVQVTANIAGESAEDVGRRVAARPDLAGVQGPTIALVWPSTPRAVGVSGWYMVTLLVPQERVLDLAAHLRRLGGDTIAVMPAQYVFDSTCSSYERLIALLEEQT
>NC_009767.1|WP_012121392.1|3768162_3769506_-|histidinol-dehydrogenase
MTIPIFDDLSVARRTILRRAPFDEIDVPVTLLHAIEQRFGARLTPAEAVDRIVRDVRERGDDALRDWSQRLDDYAGPLEVPLERCTAALASLDSDLRGAIELAIHELTRFHQRQLRTSWIEFGAEGALGQIVTPLQRVGIYVPGGAAPLPSSLLHAAIPARVAGVEELVVCTPPQRNGDVDPAVLAAAAAAGVARVFALGGAQAIAAMAYGTSSVPRVDKIVGPGNLFVVLAKRAVYGVVGIEALPGPTETLVIADAHADPRLVAADLLAQAEHVLASAILITPDRALAAQVQTEAARQLEALPEPNAAAATAAVTGRGGIVLVPDLETAFEVANEYAPEHLCLLVDDPWRYVGKVRNAGGVFLGERSFEVLGDYVAGPSHIMPTGGTARFASPVNVDDFRKVISLVALNDTALRRIGPAAARLADAEGLAAHAAAVRVRMELNAED
>NC_009767.1|WP_012121391.1|3767751_3768009_-|YggT-family-protein
MPSSFIESFIFLLIEVLSLAILFRVLLSWVDPLGNMRITQVLRDLTEPVLAPIRSILPQTMMFDFSPIIAMLLLQAISLLIRSAL
>NC_009767.1|WP_012121390.1|3765981_3767637_-|spermidine-synthase
MSHEATVTSPETNATVNTAPRTASVLAGTVFLCGVGTLGVEMIASRLLAPYFGTSQPIWAAVIGLTLVYLAVGYHVGGRIADRYPDERLLYRLVLLSGVATALIPPLAAPILGFAQRAVAHLAVGGFIGALFGVLALFAVPVTLLAMVGPFAVRLQLHRAAAGVSVAGATAGTVSAISTVGSIIGTFLTVLVLIPAIGAAATTYVYAGLLVALGALGARGWGALLALALTTALAGYTFFSSGPIKSAGCDGCTLIAEYESPYNYIQVATRQDPEYGQQVVLLLNEGLAVHSIYNTAYDGDPLDTLTGGGPWDYFAIAPFVVPGRDPASVRSLAMLGSAAGTTPAQFLAIFGPDTHIDAVEIDPMIIDVGRRFFNMRDAATGPDHPNYRVYAEDARYWLATRGGVYDVIGMDAYHQPYIPFHLTTVEFFRLVQQHLAPDGVAVVNAGLGPDGDDRLSRAIVATMEQVFPQVIVIETAHLSNQIIIGVNRNVGDGYANLLDAYARIEHPALRRTLERVYVPTRQPAATYAPFTDDRAPVERLVDSLIFDALTR
>NC_009767.1|WP_012121389.1|3764953_3765877_-|transporter
MFFLSAFVDVLLPVAIVVASGYALRRRFDLDLPSLNRLSMYVLGPSLIVTTIVRIDVAGGEALRIIAASVAVCLGIGIIGLITGMVMRLERSSIVALLLCVMFMNSGNYGLPTSRFAFGEAGFQRALLYFIAQTILAQTLAVPIASAGRSDLKHAVRQMFAMPQIYAVAIGLLARFSGIDLPHRSDALGSVFRGIALMADAALPLLLLLLGMQLANGTHVEDVRLTAVVAVLRLGVSPILAYGIARALALDDLALRVVVLEASMPSAVNMVLYSLEFNARPRFVAGVVVVTTLLSLVTLTLLLTVLR
>NC_009767.1|WP_012121388.1|3762846_3764721_+|hypothetical-protein
MNVEKVHRYPRHFTVTIEILSAITVLLATALLGRDLLRLLWSTYTLDTALFARFPWLTDLVLLISDANTPPPSGLADLLPALGWMALALATALLLRNSMPTVRTSARGMLVAFVNDWLPVPWENIRAIKVTESGDRYVLLVETDRGWLTGWHRWYSFIYRLGFRPAFLITSQISDFDELVKTLLSEADRAARTLATARRIKLQEDASSPLFRLLLSPTAFFTQRAPRSDAPPAVAGISGDVVIGQYPRRIRATLTWTAALIAGAAILRYLTLALTFLAITFPWVRSLPIIDQLDLRLLPAPWWLLIEAHIVLLFLIGVASVIYHALPTVEARSEGLIVHRWRGRTLVPWSRLRVMKVTEFSETSQIVLIQVAGGLPLDTRFVSMVYDGSLSPGILITSAIGNADALLQRIALEAMRYHEATDDTATAPFQSDARSDLLLLSVQSSRAVNHLVEELRNDPDTQGFTTRRFLRLLPTALGLASFPALILFADRSFVQHILPDGRLLGAMVVLLLLALLEWPLVSLAAVALDEMSGSSEDGMRPLYLYPQTQQPRLFLMLAALIALLLGAQPLAALLWLGAIGWSFWLAAGLWSALYDWRGGQLIGGGLLPVAFQLLLLIGYLVVRV
>NC_009767.1|WP_012121387.1|3762607_3762850_+|exodeoxyribonuclease-VII-small-subunit
MTQTNERSPGEEYETLYSRLQQIVEQLETGDLPLALALALYEEGVATAEACQRLLDHAALRVRTLMDGGDQSLAMTETDE
>NC_009767.1|WP_012121386.1|3761204_3762386_+|exodeoxyribonuclease-VII-large-subunit
MQLLTVSQLNMYLRDLLDADDLLRDVWVEGEISSFSRHFSGHCYFTLKEGEAQIGAVMWKSVAARLAALPANGEAVLAHGRVAFYEVRGQVQLYVDTLRPAGIGLLQAQFERLKERLAAEGLFDPSRKRPLPLLPHRIGIVTSPTGAALQDVLNILRRRYPLAEIVFAPCRVQGAGAAETIINALYALYETNVDVIIVARGGGGAEDLWTFNDEQVARAVFASPVPVVSGVGHETDTTLIDFVADVRAPTPSAAAELVSPDIVALTDDIAHMRNRLEAAMTQRLANARETIDRLKLRLSLRSPESRIRRDRQHIDELLRRATSTLERRLILARTRLDGARGRLEALSPLATLARGYAIVQSPTGTLITEAAQVAPDDRIEIIVRRGRFHAHVE
>NC_009767.1|WP_012121385.1|3760605_3761154_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein
MNEGERDLTISIEEEFGLSAVRELLRIISETDVSEISIERGTTRLHIKRGPSLHHHSPAPMFITPSTAAHVQPSAPPIGMVQAPVQTPPPVTPAPEPDALPPGNIIAAPMVGTFYAAPSPKDPPYVQEGDVIHVGDRVGIIEAMKMMNEIESEFAGRVAKILVQNAQPVEYGQPLMVIEPLS
>NC_009767.1|WP_012121396.1|3772023_3772821_-|Uma2-family-endonuclease
MSVAAPETKPTIIYPESDGQPMADNTLQFRWIVVVQGNLAALFADRPDVFVAGDLLWYPVEGRPDIRRAPDVMVAIGRPKGDRGAYLQWEEGGQPPQVVFEILSPSNTFSEMARKLEFYERYGVSEYYVIDPQHGDVAGWMRQGERLHVIDDMNGWSSPLLGVRFAVTEEGVTLFYPDGRPFLTFEEVVRARAEAEERAQREADRAQQEAAARAEAEARAAAEAAARAEAEARAAAEAAARAEAEERLRALEAELRRLRGSSQTE
>NC_009767.1|WP_012121397.1|3772891_3774151_-|DUF58-domain-containing-protein
MTALFDNRALIGLSALAFGLALLGLATLNGALIMLAVPPAIFVGAALLDTPTNLQLRATRTLSAERALPGVMIDVHVAVTNHGLYPTPVLIADVLPAGLELTGGQPVCLTLLAPGATVTLAYTVRGMRGFYHFNGVQATVSDCLGLGRRTVAVAAPGKILIMPEVVRLTRLGIRPRRTRIFSGTIPARQGGAGVEFFGVREYQAGDPVRWINNRATARFPGSLYVNEFEQERVADIGIILDARRGSDVQGTNHTLFEYSVQAVAALSDALISQGNRVGLLIYGHAIEWTFPGYGRIQREKVLRALAQARTGDRAALASLADIPTRLFPARSQIVLVSPLQPGDAPPILHMRAHGYEVLIVSPDPVAFEAKTLGSVADLAARIARVERQALLQRLLLAGVRIVDWDVETPLAQALAHFQR
>NC_009767.1|WP_012121398.1|3774147_3775104_-|MoxR-family-ATPase
MSENYTDVAALGQRVIEQVERVIVGKRSVLEQIMAAALAGGHVLLEDYPGLAKTLIARSFAAALGLEFRRIQFTPDLLPGDITGGYVYNRAVERFELRRGPIFANVVLADEINRASPKTQSALLEAMQERQVTLEGETMPLPEPFLVLATQNPIEYEGTFPLPEAQLDRFLMKLSIGYPSLEEEREILRRRRERRSDDAIIEQVTDATELLAVRNAIEDVYVDADIEDYIVRLVAATRTDARVAVGASPRGSLALLKLARVRAALDGRDFVIPDDVKVFVRPALAHRLILIPDLWMQRRAADEILASVLHATPAPVMR
>NC_009767.1|WP_012121399.1|3775119_3775701_-|hypothetical-protein
MWRQRLIVILALAAVVEIVALGIRGLLKDALITPLLYLIWGVMRIFESIPQGMIWLVFVAAASIVALASIWGGRRGEVRRDTDTALRGRVYEWLRLVALAQRHDYSRWRMAQRLMLLLAETIAARERIELRIARQRIVSGAIDAPQDVVAFLRAGADSYRTRQRALFQREEPSPLDVDLEQVVFAVERLVRDQ
>NC_009767.1|WP_012121400.1|3776014_3776890_-|DUF4129-domain-containing-protein
MSQWMRWRLAGWLIVTLGALTLLAAALPSVRLEPGKPFPYDLFTPPALGRPSAPVSFGSMEWVGIAVLALGVFVVVMMIFSRDFRRWLVRNLPIYLLVMLTVYLLMANLQPPLFEPRSAPGQVAGASNQPAEIPDIVVPPDLVTNPPAWLVSIISLTMAAGMVLAVWWIVRRFPKRAATTIGEEIAASAQAALRDLEAGGDVRDAVTRCYVEMMRLLHTERGIVRDPDMTAREFEQRLARTGLAATHIRRLTRLFEAVRYSPRAPGPREAREAEACLREIVDVYQSHGGER
>NC_009767.1|WP_012121401.1|3776893_3778348_-|ATP-phosphoribosyltransferase-regulatory-subunit
MGSNIDTVRGMRDVLPSEAAAQTAAAAAIERVLAAWGYEPVDLPIIEYRDLYLRKLGEELVGKVYEFNFNGRDLALRPEWTASVLRAYVGRMQDQPLPLRLRYAGPVFRNERPQRATYRQFTQVGVELIGGAAPRADAECLALACEGLAAAGVTHFTVRIGHIGLIRSLLAALGLSERAQGRLAWRLERLREHGAAAVRAEFDAPATALPLDPALLDGIDDQRAEALLLHALREIGVNLRFGTRPPEAIVGRLVRKLRRSESRDQIDRALQMLERLCRVEGDPNEAFGAAEEMLRDYAVTGLDELRAILRLAAAHGVALDRVRLDFGLGRGLHYYTGMIFEIYAGDGLQLCGGGRYDDLVSALGGRQPTPAVGFAYGLERVVAVASPVAAPSRPPVALVVATDDDVYPYALEVARLLRLRGHTAMTDVRMRGISGNLRDAARRGVRFVVVVGADECAQRCVVWRDLERHEEYRIALGDIPQAKE
>NC_009767.1|WP_012121402.1|3778448_3780179_-|HAMP-domain-containing-histidine-kinase
MSHMPADPPSVPASNQPTPWWVIAGWTVVVLIVPIMLALVNVFPDLDRRVVMSPVLYFSLVAAVAVSGIAVALAVIIAALQALDGRALATGLGLLCGAAIFLIHALVDAALPNARPDLPIIGQVIVSTFLVLGAFDPLSRSRDPLRRQWPRLLALSALVLIAGAFWSIVLETSEHAAAWLIGASVTIVACGIALWRYIQLYRQSSLHRSFALLAGIVLLGEAALARLFTASAFNVPFWLCHFAIATGMAFIAYAFLYEVRSQRQRNLMQRAAYEQARPVLVAAMDVVIETLERGDPFPPDTRIRFQREAGLSDAQIDALERLALAIARERRQREALAQLDELLRRSERNTALLAQMVIHDLKNPLTALIGFLELLSAADLSESQRSLIDSALRNGRDLAGLVDDLLDLIRYNEGRLRLRLGDVSLPVLCAECADELAGWLLYESKTLILDVSPTLPLIRADARILKRILLNLLSNAIKHTPRGTLITLRVWREPHPDRGEQTVIEVADTGPGIPPERIERLFEPFGAAGESRSLRQSSTGLGLAFCKMAVTAHGGTIEVSSFPGDGATFRIRLPDL
>NC_009767.1|WP_012121403.1|3780226_3781180_+|A/G-specific-adenine-glycosylase
MTIHRSIDQNHEHSLSLNDLHQALLKWFSEAARDLPWRRTRDPYRILVAEVMLQQTQVDRVLPKYAAFLERFPTLHTLAEAPTAEVIRMWAGLGYNRRAVNLQRAARAICARYGGVFPRDVATLVTLPGIGSYTAGAVACFAFEQDVAFMDTNIRRVIRRVFTDPTETVNERALLALARAALPVGRSWMWNQALMELGSLVCTADAPACWRCPLRDQCRDYAARRESDERFASAPVRKRLAERRERPFIGSNRYFRGRIIEALRMLPSGATFALNDLGPQVRPEYTPDDEVWLTTLIRGLERDGLVVWTETGVRLPE
>NC_009767.1|WP_012121404.1|3781213_3782251_+|histone-deacetylase
MRTAIAINPRHAAHDEPRHVEQAARLHAITAALNASGLRASLLEIPARPATEDQLLAVHSPSMIELVRWSANRPHSWIDHDTYTTSASWDAALMAAGTAVAVVEAVVGGSARNGFALVRPPGHHATPTESMGFCLFNNVAVAARYAIDHLSIGRVAIVDFDVHHGNGTQDIFYTDDRVFFCSTHASPLYPGTGAERDIGSGKGHGTTLNLPLPHGVGDAGFARLFDDVVIPAIRRYRPDLILVSAGYDGHWADPLGPLTLSVAGYAALTRRLMEAAEEVCRGRMVLVLEGGYHLRALAASAMACLEVLTNKNSIVVDPLGPAGESEPDVSALIARMRQNHPLLAG
>NC_009767.1|WP_012121405.1|3782336_3782960_+|imidazole-glycerol-phosphate-synthase-subunit-HisH
MSIAVIDYGAGNLRSVVRALQRIGAPLEVTSNPNAVIAAPAVVLPGVGATRDTMQSLEQLDLVAAIHEVIARGTPFLGICVGMQVLCDQSEEFGPHPCLGIVGGAVRRLPSHLKVPQIGWNQVCYMPHAARHPLFAGIDDGSDFYFVHSYYCDLTDEHDIAATTTYGLAFPSVLIRRNLAAVQFHPEKSGHYGLQLLTNFIRWAGVA

Crispr_ID: NC_009767_74

• CRISPR_ID: NC_009767_74
• CRISPR_location: 3818602-3818697
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_74

Consensus_repeat	Method
GCCTCGAACACCACATCGCAGAA	CRISPRCasFinder

spacers of NC_009767_74

>74.1|3818625|50|NC_009767|CRISPRCasFinder
CCGCAACTCCTGCGGCGGATATTTGCCAAACCCCGCCGGACCGAGAGAGT

CRISPR arrays and Neighbor proteins around NC_009767_74

CRISPR arrays

The CRISPR arrays of NC_009767_74

>merge|NC_009767|74|3818602-3818697|CRISPRCasFinder
GCCTCGAACACCACATCGCAGAACCGCAACTCCTGCGGCGGATATTTGCCAAACCCCGCCGGACCGAGAGAGTGCCTCGAACACCACATCGCAGAA

>NC_009767|74|65|3818602-3818697|CRISPRCasFinder
GCCTCGAACACCACATCGCAGAA	CCGCAACTCCTGCGGCGGATATTTGCCAAACCCCGCCGGACCGAGAGAGT
GCCTCGAACACCACATCGCAGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_157042848.1|3807332_3809417_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121438.1|3831290_3833348_-|biotin/lipoyl-binding-protein	unknown	unknown	gnl|CDD|237263
NC_009767.1|WP_012121427.1|3816897_3817593_+|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl|CDD|223777
NC_009767.1|WP_012121429.1|3818849_3819227_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121437.1|3830684_3830981_-|BrnT-family-toxin	unknown	unknown	gnl|CDD|367913
NC_009767.1|WP_012121423.1|3813728_3814124_-|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|224523
NC_009767.1|WP_012121430.1|3819275_3820496_-|GTP-binding-protein	unknown	unknown	gnl|CDD|223597
NC_009767.1|WP_012121428.1|3817608_3818448_+|hypothetical-protein	unknown	unknown	gnl|CDD|110924
NC_009767.1|WP_012121433.1|3824315_3824558_+|FmdB-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197903
NC_009767.1|WP_085979105.1|3821057_3823481_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330889.1|3830422_3830716_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121432.1|3823662_3824166_-|glutathione-peroxidase	unknown	unknown	gnl|CDD|223463
NC_009767.1|WP_012121422.1|3812770_3813583_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|238564
NC_009767.1|WP_012121435.1|3826017_3829002_-|hypothetical-protein	unknown	unknown	gnl|CDD|370843
NC_009767.1|WP_012121426.1|3816547_3816874_+|hypothetical-protein	unknown	unknown	gnl|CDD|133394
NC_009767.1|WP_012121434.1|3824588_3825698_+|GTP-binding-protein	unknown	unknown	gnl|CDD|223597
NC_009767.1|WP_041330886.1|3815261_3816203_+|DnaJ-domain-containing-protein	unknown	unknown	gnl|CDD|236757
NC_009767.1|WP_012121424.1|3814120_3815014_-|cobalamin-binding-protein	unknown	unknown	gnl|CDD|238564
NC_009767.1|WP_012121421.1|3809422_3811498_-|peptidase-S41	unknown	unknown	gnl|CDD|143478
NC_009767.1|WP_041332063.1|3806279_3807275_+|oxidoreductase	unknown	unknown	gnl|CDD|176248

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121438.1|3831290_3833348_-|biotin/lipoyl-binding-protein	gnl|CDD|237263	PRK12999, PRK12999, pyruvate carboxylase; Reviewed.	1.04175e-152
NC_009767.1|WP_012121427.1|3816897_3817593_+|rhomboid-family-intramembrane-serine-protease	gnl|CDD|223777	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism].	3.97785e-36
NC_009767.1|WP_012121437.1|3830684_3830981_-|BrnT-family-toxin	gnl|CDD|367913	pfam04365, BrnT_toxin, Ribonuclease toxin, BrnT, of type II toxin-antitoxin system. BrnT is a ribonuclease toxin of a type II toxin-antitoxin system that exhibits a RelE-like fold. The antitoxin that neutralizes this toxin is pfam14384. BrnT is found in bacteria, archaea, bacteriophage, and plasmids. BrnT-BrnA forms a 2:2 tetrameric complex and autoregulates its own expression, which is induced by a number of different environmental stresses. Expression of BrnT alone results in cessation of bacterial growth which can be rescued after subsequent expression of BrnA.	1.23203e-31
NC_009767.1|WP_012121423.1|3813728_3814124_-|acyl-CoA-thioesterase	gnl|CDD|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	7.21811e-39
NC_009767.1|WP_012121430.1|3819275_3820496_-|GTP-binding-protein	gnl|CDD|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	4.52195e-125
NC_009767.1|WP_012121428.1|3817608_3818448_+|hypothetical-protein	gnl|CDD|110924	pfam01972, SDH_sah, Serine dehydrogenase proteinase. This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan.	1.31047e-128
NC_009767.1|WP_012121433.1|3824315_3824558_+|FmdB-family-transcriptional-regulator	gnl|CDD|197903	smart00834, CxxC_CXXC_SSSS, Putative regulatory protein. CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.	2.37209e-06
NC_009767.1|WP_012121432.1|3823662_3824166_-|glutathione-peroxidase	gnl|CDD|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	4.03385e-93
NC_009767.1|WP_012121422.1|3812770_3813583_-|ABC-transporter-substrate-binding-protein	gnl|CDD|238564	cd01144, BtuF, Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	9.82609e-55
NC_009767.1|WP_012121435.1|3826017_3829002_-|hypothetical-protein	gnl|CDD|370843	pfam10162, G8, G8 domain. This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after its 8 conserved glycines. It is predicted to contain 10 beta strands and an alpha helix.	2.61521e-36
NC_009767.1|WP_012121426.1|3816547_3816874_+|hypothetical-protein	gnl|CDD|133394	cd04766, HTH_HspR, Helix-Turn-Helix DNA binding domain of the HspR transcription regulator. Helix-turn-helix (HTH) transcription regulator HspR, N-terminal domain. Heat shock protein regulators (HspR) have been shown to regulate expression of specific regulons in response to high temperature or high osmolarity in Streptomyces and Helicobacter, respectively. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	9.54802e-05
NC_009767.1|WP_012121434.1|3824588_3825698_+|GTP-binding-protein	gnl|CDD|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	1.92303e-96
NC_009767.1|WP_041330886.1|3815261_3816203_+|DnaJ-domain-containing-protein	gnl|CDD|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	2.46925e-82
NC_009767.1|WP_012121424.1|3814120_3815014_-|cobalamin-binding-protein	gnl|CDD|238564	cd01144, BtuF, Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	1.53023e-67
NC_009767.1|WP_012121421.1|3809422_3811498_-|peptidase-S41	gnl|CDD|143478	cd07562, Peptidase_S41_TRI, Tricorn protease; serine protease family S41. The tricorn protease (TRI), a member of the S41 peptidase family and named for its tricorn-like shape, exists only in some archaea and eubacteria. It has been shown to act as a carboxypeptidase, involved in the degradation of proteasomal products to preferentially yield di- and tripeptides, with subsequent and final degradations to free amino acid residues by tricorn interacting factors, F1, F2 and F3. Tricorn is a hexameric D3-symmetric protease of 720kD, and can self-associate further into a giant icosahedral capsid structure containing twenty copies of the complex. Each tricorn peptidase monomer consists of five structural domains: a six-bladed beta-propeller and a seven-bladed beta-propeller that limit access to the active site, the two domains (C1 and C2) that carry the active site residues, and a PDZ-like domain (proposed to be important for substrate recognition) between the C1 and C2 domains. The active site tetrad residues are distributed between the C1 and C2 domains, with serine and histidine on C1 and serine and glutamate on C2.	3.30924e-33
NC_009767.1|WP_041332063.1|3806279_3807275_+|oxidoreductase	gnl|CDD|176248	cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0

Protein sequences

>NC_009767.1|WP_012121428.1|3817608_3818448_+|hypothetical-protein
MDLIGLLWIFFIISSLQPVIRQKMLENGRLRLLERLEQQRQSRVIVLIHRQETLSLLGFPLVRYIDIDDSEAVLRAIKMTDKDVPIDLVLHTPGGLVLAAEQIASALRKHPAKVTVFVPHYAMSGGTLIALAADEIVMDENAVLGPVDPQLGQQPAASILKVLERKPISEIDDETLIMADIAEKAIRQVKATVIELLADRIGAEKAEHIATMLATGVWTHDYPISVREARELGLPVSTDMPSLVYQLMGLYPQTAQRRPSVEYIPLPRSRESERRRAER
>NC_009767.1|WP_012121427.1|3816897_3817593_+|rhomboid-family-intramembrane-serine-protease
MIPLYDNVHARSFPFVNWAIILANIAFFLIEVALGPDAERFVTMFAVVPARLLANPGPDQIATLFTSMFLHGGWSHLLSNMLALYIFGDNVEDRMGGGRYLTFYIICGLIAALTHILFNPDSPIPTIGASGAISGVLGAYLILYPTARVITLIPIFFLPWFVEIPALVYLGVWFLSQLLNGTLAIIIGAQGFGGVAWWAHAGGFVAGIVLVGLFIQRRSRRRVYADEYWPW
>NC_009767.1|WP_012121426.1|3816547_3816874_+|hypothetical-protein
MLIRRMNPEMLAAQTGLPVEVIQDLIDLGLIGSFPEPTETDLIELRRVRRLIDILGLSHEAVDVVLQMRRRLVALQREAAQLRAELAERHRAERSTVWIEAEWIEERE
>NC_009767.1|WP_041330886.1|3815261_3816203_+|DnaJ-domain-containing-protein
MEFKDYYAVLGVPPDADEQTIKKAYRKLARQYHPDVNPGDKKAEERFKEINEAYEALSDPERRHKYDQLREQYQRWQQRGGSGEFDWGPWQTAPGQTVYTYTTVSPEDLEDLFGGESPFSDFFGTIFGQPHGATPRGPQRGRDLELPVEISLEEAFYGTTRSLQVGTRRIEAKIPVGARTGTRVRLAGQGRPGIAGGPPGDLYLLITVLPHPQFERDGDDLTTTVSVDCFTAIAGGEARVPTLDGSVLLKIPPRTQADQVFRLRGKGMPRLERPTERGDLFARVKLVLPETLSDADVETIRTLARERSARKKG
>NC_009767.1|WP_012121424.1|3814120_3815014_-|cobalamin-binding-protein
MRIVSLLPSATEIVCELGLADMLVGVSHECDYPPDVVADLPRVTYSAIPHGLSSAEIDQVVSARLARGESLYLLDEALLADVQPDLVITQELCDVCAVSFADVCVVAAQLPGNPRVVSLAPPNLDGIFSDVLTIAEAVGVPERGRRLNERLSQRLDGVRRAVAGQPRPGVVALEWLDPPFIGGHWVPEMIHLAGGRDLLGRAGERSFRVRWEDVLCAQPDVVLLIPCGYSAEAAQREWDALPRPPGWFDIPAARKGQVYALDANSYCSRPAPRVVDGVEHLARLLHPACFPQEGTAQ
>NC_009767.1|WP_012121423.1|3813728_3814124_-|acyl-CoA-thioesterase
MSAADRVETRMVFPVFPMNTNHYRTLFGGTAVAWIDQAAFICATRWCRRKVVTVRISEVNFHHPVREGSIVEVIARLVGTGRSSMRIAVDVWWEPMDHNERVLVCQAECVLVAVDEQNRPVTVPPLTETMS
>NC_009767.1|WP_012121422.1|3812770_3813583_-|ABC-transporter-substrate-binding-protein
MLVVDALGRRLELKRPPQRIVSLVPSLTEWLFDVGLGARVVAVTDYCIEPAAALAGIPRIRGTKNPDRAKIIALQPDLVIADQEENRERDVQALTAAGVPVYVTAIRSVADVLEQYGRLAAVLGAADAAAPGLTALRAALAEAAQRAPQRRIPTLAFIWRDPWMAVGAETYAGDLLERCGAENLGRRLPGRYPRASLETFMRLQPEVILLPNEPYAFSERDLVAFAPYGDVPAVRDGRVLLCDGMMLTWPGLRAVRALRVFAEAIAGGER
>NC_009767.1|WP_012121421.1|3809422_3811498_-|peptidase-S41
MKQRPFWYIGAIAALLLALAACGGGAPTNLLPAQDATAVNPSNVSPVAEATASPEVITPSPIPSRTATGGVEVITGEFTYTNDIITTYYVEHAVGLVDLYGFITRDEEWELPVESQALGPLTIDLERQRGEFRLALPARPAGVLADVDNNTQRDTGVQVFVVAYWPNLYGGPFSEGDDRSFGWPAYLASTVNDPENNDEITGGKLVVWAPDEAQQFPTDFGADGLLFTADDPVGPLAAGYSVIDLDQRPFGIERNREEQVTLHEPPDAAIKDFSDLSYTRAFDEMFKRVRVEYAFNGIPGKAPDWDALYANLAPRVAEAERQQDRRAFFEVMFDFANAFRDGHVGVNSPLSGALFRERAAGGYGFAIRELDDGRALVVFVTRNGPADRAGVQVGAELLAFNGAPVKDAIAAVEPLGGPFSTDFALRYQQARYLLRAPVGTQAQVTFANPRGAPQTVTLRAVEERDSFFATSIFQESNPAALPVEFEQRASGVGYIRINSNYDDLNLLIRLFERALKTFDDLDVPGIIIDMRQNSGGAPLGLAGFLSDREIIIGQDEYYSERTGRFEPEGPLDTILPHQNQYRFDKIVLLVGQACFSACEFESYGFSKVPGVIVIGETPTAGVYAEVSRGQYVLPDDIFLQVPTGRTLLPDGAPLLEGVGVVPTIRVPVTAETVLSNRDAVLERAEREIVGR
>NC_009767.1|WP_157042848.1|3807332_3809417_+|hypothetical-protein
MARFSHSSRQSAALLGWIAAELRQIAAVARAPQWWASFGVALALWALAYQVAPTIRLDVGGDRETRRRGFDSPFLINFNDSEPADLPDRPWYAADSLPYRWTRTISSVVFPGAGGDHWLLRVTAASGRPDGSAVRSVWRTANGSSITLDIAAQRRMYAILARTDPAGDLRVTFETPRLIAPSDPRILGLPVFRIVATPAQPAPYRPAWVMSGWLALSLAGMYALTRRTCAPSHHATRASAGIVATVALLAAWMIAVRRTDATVLAPTVAVWIWVAYALVPFVEAALRATQPTADAVTAAGLTAVAWFVRVAGMLHPYAQTSDLGLHVNNLADVARGTIFFTEGLPCRAGAGPQPYLPGGYLALLPVVLLTGADRAALTLLVQAGTALLESLTVAVLWLLLRRTDTGRTASLYAAAIYALAPPILRSYSVGEMANLLAQALVAPLILWMTLALRDHSWKATLSGAALILLILLSHGGVALSAGAALAVWFLFSLVQPDGGTSAEGAQSAANTPRISQIRRMSAWRLAIAIGAAGIVAFTLFYSAFGYVAEERRIAQEALAAQGIICPPGDPLLDKLNRWVIGFVFSPGAPLPSLALAVGVTGALLAGQPRSGALRLTLAACWLGALASLGTLLFSDQPVRWTIFIYPALCIGAGVALAQWQRHGRAGATLALTVMLFLIWYGAADWVRQVSEYLR
>NC_009767.1|WP_041332063.1|3806279_3807275_+|oxidoreductase
MTQDTFRALVLTQENGAIHAEFRQLTNDDLPQGDTLVQVVYSCLNYKDGLNVTGKGKISRFFPMVPGIDLAGTVIETTSPAYHPGDPVVLTGWGIGERHWGGYAQRARVKAEWLVPLPAGMTLFHSMAIGTAGFTAMLAVMALEEAGVKPGDRDVLVTGAAGGVGSIATTLLARRGYRVAASTGRAETHDYLRELGATTIVPRAELAAPGRPLESERWAGAVDTVGGDVLARVLAATATGGAVAACGNAGGAHLTTTVFPFILRGVRLIGIDSVTCPTERRRAAWDNLARELPADVLDRMTRVEPLSRVKELCDEIVAGQVRGRVVFDVNA
>NC_009767.1|WP_012121429.1|3818849_3819227_-|hypothetical-protein
MKVAYVFATDMSATYKLGKMILPQLEQGVHGAQVVGMMFFDDNLYVLRKGDPIGERLAKVAKAQNILLMVCDRCAVERDLGEGDFTQCGFGQVKARGLVEGVVAGCFPQLYKALAGSPPDQVITL
>NC_009767.1|WP_012121430.1|3819275_3820496_-|GTP-binding-protein
MAQHTAQPLPVTVLSGFLGSGKTTLLNHVLANREGLRVAVIVNDMSEVNIDARLVRSGGAALSRTEERLIEMTNGCICCTLREDLLVEAARLAREGRFDYLLIESTGISEPLPVAETFTFADETGVSLAELARLDTMVTVVDAFNFPQDLCSTDDLRDRNMAADDDDERSVVDLLIDQVEFADVLVLNKIDLVDPDVVDQLEALLRKLNPDARIVRASFGRVPLREILNTGRFNFERAAQALGWLKELRGEHTPETEEYGISSFVYRARRPFHPQRFWDLIHDEWPGVLRSKGLIWLATRMSISGLWSQAGSACRVEPGGLWWAALPDDELPDDPEDEAHLAQVWHSRWGDRRQELVLIGQDMDEAALRARLDACLLTDDEMALGPEGWAQFDDPFGTWSVWVSED
>NC_009767.1|WP_085979105.1|3821057_3823481_+|hypothetical-protein
MTSPNNASFTVGISSVFTITTSGFSLSNPPYFYTVPGTLPNGLEIVSNNDTTGYISGDPAPGTGGVYTFTLYADDENGGIATQSFTLTIYEAPAITSPNTTTFTVGQAGSFTVTATGYPTPTLSVSGALPSGVTFTPNSNGTATISGTPTAGGVFPLTITAANGVNPNATQTFTLIVNQAPAITSPNTATFTVGQAGSFTVTATGYPTPTLSVSGALPSGVTFTPNSNGTATISGTPTAGGVFPLTITAANGVNPNATQTFTLIVNQAPAITSPNTATFTVGQAGSFTVTATGYPTPTLSVSGALPSGVTFTPNSNGTATISGTPTAGGVFPLTITAANGVNPNATQTFTLIVNQAPAITSPNTATFTVGQAGSFTVTATGYPTPTLSMSGALPSGVTFTPNSNGTATISGTPTAGGVFPLTITAANGVNPNATQTFTLIVNQAPAITSPNTTTFTVGQAGSFTVTATGYPTPTLSMSGALPSGVTFTPNSNGTATISGTPTAGGVFPLTITAANGVNPNATQTFTLIVNQAPAITSPNTATFTVGQAGSFTVTATGYPTPTLSVSGALPSGVTFTPNSNGTATISGTPTAGGVFPLTITAANGVNPNATQTFTLIVNQAPAITSPNTATFTVGQAGSFTVTATGYPTPTLSMSGALPSGVTFTPNSNGTATISGTPTAGGVFPLTITAANGVNPNATQTFTLIVNQAPAITSPNTTTFTVGQAGSFTVTATGYPTPTLSVSGALPSGVTFTPNSNGTATISGTATAGGVFTLTITAANGVNPNATQTFTLKVEQNQFRVFLPLVVR
>NC_009767.1|WP_012121432.1|3823662_3824166_-|glutathione-peroxidase
MGIYDITANRIDGTPQPLSDYRNRVLLIVNVASKCGFAPQYAGLETLYRRYRDEGFVVLGFPCDQFAGQEYDDPNAIQQFCTRNYGVSFPIFEKVDVNGPNTHPLFALLKAEKPGLLGIQTIPWNFTKFLVDRQGKVRRRYAPTDTPEKIERDIAALLRQPTAITAQ
>NC_009767.1|WP_012121433.1|3824315_3824558_+|FmdB-family-transcriptional-regulator
MPLYTYTCPECEIEIEELRPSWRADEPVECPVCHGLCVRDWSSFSIRSRNAPKPVYASPAQVARALHGPGCPCCIPRRRS
>NC_009767.1|WP_012121434.1|3824588_3825698_+|GTP-binding-protein
MSIDTPLKPVPVTILTGFLGAGKTTLLNRILHADHGLKVAVLVNDFGSINIDTQLVVGVEGETISLANGCICCTIRGDLLKTALLLLDRAEPPEYLIIEASGVSDPWAVAETFDLPELRSFFRLDSVITVVDAEYVRQQQYYEDLIIHQISAADVVVLSKVDLVTEEQRADVEQWVRQIVPRVRILPAIHGDVPMSLILGVGRYNLEVQPRIVVPRHDHEHDHHHDHEHGPHCDHDHGDGDQQHDHHHDHSAEFSTWSYVHDHPFSLKKLRTALQDLPATIFRGKGVLYLAETPQRRAILQIVGVRITVTVGEPWGDATPVTQMVFIGAPGGLDGASLTAAFDACLTNAPGQEQIAGQQSWFRRVFGGG
>NC_009767.1|WP_012121435.1|3826017_3829002_-|hypothetical-protein
MHRTPPLFVSVYALLICALFATNWSLAASPSEHRPSVSMTFVSGDTPVRLDAQVEPDATVVWRNNDTRPHRLRSVDGSWTSPVIAPGDVQRQWFAQPGRYPFVCDFDQDMRGELTVQSGAYRVFLPLVARGMPAGPSGERWSNPATWGGRLPQAGEAVRIPPGKTVLLDVSPPPLRSLTIEGSLVFDNRDLDLSAGWIMLHGNGRLRIGDPAAPFRHRATITLTAPDPDEDVMGMGTRGILLMGGTFEAYGLAPVPVWTTLADHADAGATRLTLRDAVNWQAGDQIVVAPTDFYGVAETEQLTVQTADGPQVDLSTPLRQERWGRLQYVSAAGMILTPTTDITPLALDERAEVGNLSRQIVIQGADDARWRNERFGAHIMVMNHAVLRLDGVELRRMGQGGRLGRYPIHFHLLSYAPNGALIGDATAQTVTNSSIWNSANRCIVIHGTNGVTVRNNICYDIAGHAIFLEDAVERRNLIEHNLVLKVRQPPQPLLPSDRIMFRRGPSGFWLTNPDNTVRGNVAADAAGNGFWLAFPEKPLGDNQNVPIRPINTLLGIFSHNVAHSNNRPGINIDFAPIDNAGNTAETKYIPTIDGGPFRYENRIRFTLSDITTYKNNDNGLWNRVSWPNYVRFVSADNAGMFFAGAGDDGRIIDSLIIGTSLNNRNPSPTSFSGDQPNTAIASYHSTFDIYNNVVVNFPLSPRNDRASGAFATNDYYTRPVDRGLVRNPNNRLINSHPGRRVISPNLNTPVGNAALAGALWDPYGYWGPAGNYWVYDVPFLTAGRPCAPVAPAGQNGQSCVGPYYGVAGFRIDGGDPFKPRMPLTVTRLDDALQPMAQWIVEEGSGSGRNTFGIMPWMRHFAAVPGGRYLIEFRDAANSLPPPSHEVKLELTNMHSPADQVILAVPFSGSVTARAYLTTRQSYEYAAPGSPDRRDLTPVSSMAALLATDNSMWQDTVNQRVWVHVRGGVPWSGGEPTNPLSDAALYRDTILRIVR
>NC_009767.1|WP_041330889.1|3830422_3830716_-|hypothetical-protein
MSDEMAKQPDETDDMLPEYDFSGGVRGKHYRAYQRGYKIIVHKIDGTTEERDYTLPEGAVMLDPDVRAYFPDAEAVNTALRGLIKLIPTKRASGKSS
>NC_009767.1|WP_012121437.1|3830684_3830981_-|BrnT-family-toxin
MSLRFEWDEAKSVANLNKHGVSFDEAQTVFGDPDAITLLDDRHSDVEDRFIDIGKSASGRILVVVYTENDMRIRIISCRRATPKERRQYERRDGETTR
>NC_009767.1|WP_012121438.1|3831290_3833348_-|biotin/lipoyl-binding-protein
METGHASQVASVQDDDVFVRPGMTAREIVQAVRNLKGVCLTSVSMRDAGQSDFKNRHRIYDLKTLAPLYNRMGLFSAECHGGARWHVGIMNRRESPFEEIQILRRLMPNVLLQTLVRETNLWGYRPYPRNVIEYAVAQVDIDVWRCFSFLNDVRNMRAVAEVVMKRGRLFEPAISFTVADWATDAYYLGVVREIVALAGGVDEIILCIKDMAGVGNPARISQLVTTIKEHYPDLLIHYHRHITDGLAIPALFAAAQSGAKIVDVQEDALVRFYGHPPILGVQAYFEEGGIHVHLNRMAAEQTNQQVREWIGHYEWAESPFKGYDHGVTKHRMPGGAFPSSFEQAEKGGFLHLMPAILRVMALYNQIVRYFDVTPGSQITWVTCSGIVNRYAKEQGESGVRRLIALLSKFVEEKGQDIEAMSEEEREELLQLFRNASGDFKNLLVGGYGRLPVGWPADWVYQSAFGDEWQAKIQGRTDRSPLDTLKDDDLDRLRQTLSEAIGRAPTEEEFILYLMHPKDALSFIEFRERYGMAPLVLPTDVWRNGLRRSGDKVDFELDGKPYCIELVSVGAEHEGVIHVVLKVNNVTRVYPVATPRARKAEIRMAKGPNEIGAPINGNVWRIGNPQRGPIHVGDVVHKGEEVANLEAMKMEHAILAPFSGRIAEVCIKLNDVVKEGQLLFVLEKNA

Crispr_ID: NC_009767_75

• CRISPR_ID: NC_009767_75
• CRISPR_location: 3864784-3864887
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas3

Consensus repeat of NC_009767_75

Consensus_repeat	Method
CCAGGGGAGGGCAGGTCTCAGACC	CRISPRCasFinder

spacers of NC_009767_75

>75.1|3864808|56|NC_009767|CRISPRCasFinder
CAGGGGAGGGCAGGTCTCAGACCTGCCCCAACCTTCCGTCGGGACCGGGCGCGGTT

CRISPR arrays and Neighbor proteins around NC_009767_75

CRISPR arrays

The CRISPR arrays of NC_009767_75

>merge|NC_009767|75|3864784-3864887|CRISPRCasFinder
ACCCGATGAGGCAGGTCTCAGACCCAGGGGAGGGCAGGTCTCAGACCTGCCCCAACCTTCCGTCGGGACCGGGCGCGGTTCCAGGGGAGGGCAGGTCTCAAACC

>NC_009767|75|66|3864784-3864887|CRISPRCasFinder
ACCCGATGAGGCAGGTCTCAGACC	CAGGGGAGGGCAGGTCTCAGACCTGCCCCAACCTTCCGTCGGGACCGGGCGCGGTT
CCAGGGGAGGGCAGGTCTCAAACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121458.1|3860675_3860888_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121461.1|3864906_3865611_-|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl|CDD|234816
NC_009767.1|WP_041330898.1|3857897_3858095_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121466.1|3871145_3871895_+|hypothetical-protein	unknown	unknown	gnl|CDD|237974
NC_009767.1|WP_041330906.1|3868306_3870880_-|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	gnl|CDD|274800
NC_009767.1|WP_012121462.1|3865624_3865999_-|hypothetical-protein	unknown	unknown	gnl|CDD|259988
NC_009767.1|WP_012121456.1|3858578_3860228_+|polymerase	unknown	unknown	gnl|CDD|377422
NC_009767.1|WP_012121460.1|3863086_3864766_+|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|234861
NC_009767.1|WP_012121464.1|3866865_3867240_+|(2Fe-2S)-binding-protein	unknown	unknown	gnl|CDD|223706
NC_009767.1|WP_041330900.1|3860248_3860689_-|PIN-domain-containing-protein	unknown	unknown	gnl|CDD|350259
NC_009767.1|WP_083760321.1|3867843_3868062_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_012121468.1|3873300_3874248_-|prohibitin-family-protein	unknown	unknown	gnl|CDD|259799
NC_009767.1|WP_012121463.1|3866002_3866596_-|SCO-family-protein	unknown	unknown	gnl|CDD|239266
NC_009767.1|WP_157042664.1|3858169_3858313_-|hypothetical-protein	unknown	unknown	gnl|CDD|224096
NC_009767.1|WP_083760320.1|3853935_3854619_+|DUF11-domain-containing-protein	unknown	unknown	gnl|CDD|273634
NC_009767.1|WP_012121459.1|3860977_3862975_-|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl|CDD|234792
NC_009767.1|WP_012121455.1|3856646_3857693_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|235640
NC_009767.1|WP_157042665.1|3866606_3866816_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121454.1|3854883_3856116_+|cysteine-desulfurase-like-protein	unknown	unknown	gnl|CDD|273906
NC_009767.1|WP_012121467.1|3872570_3873224_+|pyrimidine-5'-nucleotidase	unknown	unknown	gnl|CDD|319791

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_041330906.1|3868306_3870880_-|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	1e-15	51.5	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121461.1|3864906_3865611_-|ribose-5-phosphate-isomerase-RpiA	gnl|CDD|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	2.03413e-114
NC_009767.1|WP_012121456.1|3858578_3860228_+|polymerase	gnl|CDD|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	6.34863e-11
NC_009767.1|WP_012121466.1|3871145_3871895_+|hypothetical-protein	gnl|CDD|237974	PRK15489, nfrB, glycosyl transferase family protein.	0.000550894
NC_009767.1|WP_041330906.1|3868306_3870880_-|DEAD/DEAH-box-helicase	gnl|CDD|274800	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase. A conserved gene neighborhood widely spread in the Actinobacteria contains this uncharacterized DEAH-box family helicase encoded convergently towards an operon of genes for protein homologous to type II secretion and pilus formation proteins. The context suggests that this helicase may play a role in conjugal transfer of DNA.	0
NC_009767.1|WP_012121462.1|3865624_3865999_-|hypothetical-protein	gnl|CDD|259988	cd13921, Amicyanin, Amicyanin is a type I blue copper protein that plays an essential role in electron transfer. In Paracoccus denitrificans bacteria, amicyanin acts as an intermediary of a three-member redox complex along with methylamine dehydrogenase (MADH) and cytochrome c-551i. The electron is transferred from the active site of MADH via the amicyanin copper ion to the cytochrome heme iron. The electron transfer from MADH to cytochrome c-551i does not involve a ternary complex but occurs via a ping-pong mechanism in which amicyanin uses the same interface for the reactions with MADH and cytochrome c-551i.	0.000340028
NC_009767.1|WP_012121460.1|3863086_3864766_+|dihydroxy-acid-dehydratase	gnl|CDD|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NC_009767.1|WP_012121464.1|3866865_3867240_+|(2Fe-2S)-binding-protein	gnl|CDD|223706	COG0633, Fdx, Ferredoxin [Energy production and conversion].	1.0511e-13
NC_009767.1|WP_041330900.1|3860248_3860689_-|PIN-domain-containing-protein	gnl|CDD|350259	cd18692, PIN_VapC-like, uncharacterized subfamily of the VapC-like nuclease family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.27485e-49
NC_009767.1|WP_083760321.1|3867843_3868062_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	4.66403e-07
NC_009767.1|WP_012121468.1|3873300_3874248_-|prohibitin-family-protein	gnl|CDD|259799	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prohibitin (a lipid raft-associated integral membrane protein). Individual proteins of the SPFH (band 7) domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. These microdomains, in addition to being stable scaffolds, may also be dynamic units with their own regulatory functions. Prohibitin is a mitochondrial inner-membrane protein which may act as a chaperone for the stabilization of mitochondrial proteins. Human prohibitin forms a hetero-oligomeric complex with Bap-37 (prohibitin 2, an SPFH domain carrying homolog). This complex may protect non-assembled membrane proteins against proteolysis by the m-AAA protease. Prohibitin and Bap-37 yeast homologs have been implicated in yeast longevity and in the maintenance of mitochondrial morphology.	1.78943e-75
NC_009767.1|WP_012121463.1|3866002_3866596_-|SCO-family-protein	gnl|CDD|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	5.78659e-60
NC_009767.1|WP_157042664.1|3858169_3858313_-|hypothetical-protein	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	0.00123859
NC_009767.1|WP_083760320.1|3853935_3854619_+|DUF11-domain-containing-protein	gnl|CDD|273634	TIGR01451, unnamed_protein_product, conserved repeat domain. This model represents the conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis, and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydial outer membrane proteins.	0.00171123
NC_009767.1|WP_012121459.1|3860977_3862975_-|excinuclease-ABC-subunit-UvrC	gnl|CDD|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NC_009767.1|WP_012121455.1|3856646_3857693_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	9.12134e-132
NC_009767.1|WP_012121454.1|3854883_3856116_+|cysteine-desulfurase-like-protein	gnl|CDD|273906	TIGR01976, am_tr_V_VC1184, cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase. [Unknown function, Enzymes of unknown specificity].	1.82127e-164
NC_009767.1|WP_012121467.1|3872570_3873224_+|pyrimidine-5'-nucleotidase	gnl|CDD|319791	cd02604, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to Saccharomyces cerevisiae Phm8p and Sdt1p. This family includes Saccharomyces cerevisiae Phm8p (phosphate metabolism protein 8) and Sdt1p (Suppressor of disruption of TFIIS). Phm8p participates in the ribose salvage pathway, it catalyzes the dephosphorylation of nucleotide monophosphates to nucleosides, its preferred substrates are nucleotide monophosphates AMP, GMP, CMP, and UMP. Phm8p is also a lysophosphatidic acid phosphatase, dephosphorylating lysophosphatidic acids (LPAs) to monoacylglycerol in response to phosphate starvation. Sdt1p is a pyrimidine and pyridine-specific 5'-nucleotidase; it is an NMN/NaMN 5'-nucleotidases involved in the production of nicotinamide riboside and nicotinic acid riboside, and is a pyrimidine 5'-nucleotidase with high specificity for UMP and CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.33671e-49

Protein sequences

>NC_009767.1|WP_012121460.1|3863086_3864766_+|dihydroxy-acid-dehydratase
MSSDLKRHSRTITDGRTRAGARAMLKAIGFTDEDLAKPIIGIANTWIETMPCNINLRALAARVKEGVRAAGGTPMEFNTVAISDGVTMGTEGMKASLISRDLIADSIELMGRGYMFDAIIALVACDKTIPGAAMGLTRLNVPGFLLYGGSIAPGHWRGKEITIQHVYEAIGAVAAGKMTDEELKEIEDAACPGPGACGGQYTANTMATVMEIIGLSPIGTAAVPAADPRKDSVGYRAGQLIMDVLRRDLKPRDILTRAAFENAIASVALTGGSTNAVLHLLALAREAGVPLTLDDFDTISRRTPLCCDLMPSGKYSAIHVDQAGGIQVIAKRLVDGGFAHGDAITVTGRTLAEEAADAVETPGQDVIRPLDNPIKPTGGLLVLRGNLAPEGSVVKLFGYERTYHRGPARVFDSEEAAMAAIVGGEIRPDDIVVIRYEGPRGGPGMREMLGVTSAIVGAGLGQSVSLVTDGRFSGATRGVMIGHVAPEAARGGPLAIVQEGDEIEINLDERRVDLVLSEEEIADRLLAWQPPAPRFEWGVMARYSALVSSASEGAVLVTP
>NC_009767.1|WP_012121459.1|3860977_3862975_-|excinuclease-ABC-subunit-UvrC
MSDLMHTTVADPIALEERLRAVPLAPGVYLWKNAQGKIIYIGKSKRLRDRMRSYFARTDDPYGKTARLVAQIADFQVIVTSNELEALLLEMTLIKQHRPRFNVLLKDDKSYPYIKVTLHEPWPRIVATRNPRWEEGARYFGPYSSAGAVYRTLDQLNRLFAFRPPSRCPDDKFNRHRRLGKPCLYYDIKRCLGPCVPGLVNQNDYRATVESVCRFLEGKSDLVAKILRRQMEEAAERLDFERAARLRDSIRDIELIGQRQQVLRHDDADQDVIGLAREEGMAVVQVLRIRAGKLISAESFPLQNAEGERDESLLASFLTQFYDAAAELPATLLLPAPLDDLAIIEQWLAQKAGRKVALHTPQRGEKRRLVELAEQNARQKLDELRLQWLNSEQRAVAGLTEVRDLLGLSALPTRIECFDVSNTQGSHSVGAMVVFEHGEPKKSRYRKFRIKTVEGANDVASIQEVLRRRFRRAAMVIGEEEQPADERVVNGQTDAAEQEDGEKTDAPGSQSDLERQETWAELPDLILIDGGIGQVNGALHVLRDLCFEHIPVVGVVKGPNRDRFDLLIPGASDLIVLERESAALRLIRRIDEEADRFAKDYHRKLRSKSATASRLEEIPGIGPKRRQLLLKRFGSLDGIRNATVDEIAAVPGMTRKAAEELKSLL
>NC_009767.1|WP_012121458.1|3860675_3860888_-|hypothetical-protein
MSVIEFQTHVEHGTIDLPEEYRHLVTGRVRIIILINEDEDEEDMVEFLLDHPYHSDSFTPLKRDEIYERR
>NC_009767.1|WP_041330900.1|3860248_3860689_-|PIN-domain-containing-protein
MSAGSGSSSLVFIDTNIWLYAFSQIQDIQKAHRARVLIRGTSQIVLSTQVINEVAVNLLRKFQAAESDIRKRIRSFYRKYLIIEHSRAILLHASDLRTVYRVSYWDSLILSSALAAGATILYPEDMQEGLMVANQLTIVNPLRDSS
>NC_009767.1|WP_012121456.1|3858578_3860228_+|polymerase
MKRTWGSVPFLRPLILFVIGGVLGTLVAYDPVVSLAWLAPMIAGAALYLSMMTVLRHRLAIIALVLAFWSIGYSVLLATQYRYLGFDEKLGLAIWLGRLFSSPFPDVTPAFIDANAAASFLAPAIPLIIGLAWTARGVCRVAWGIAAGSVAFGVLLTSSRGAFVALAAAGLFWLLVRVQASAHQSGAHMPRFDLRSAIVAGAVIAGVVAGGLLLVWHPLTQDALASAMLRAEDRLAVYRNSLFLALDFPFSGIGPGAVFGQMYSRFQLLIIPTYIGYAHNLFLGVWLAQGIIGLIGFLWLLIASLHRIAPTLHTQSPLTQGAAIGCVALLFHGLTDAPQYATSWATLILAFGLFGMTAATCRPTEALLLAVAPATKRHSICSWVVAIAGVIGLTLSAPHLAAAGAGNIAAGFQARAMLAEGLTQEERAALMHESVVWVNHGLRIAPDSPLIQKRLGMLALDLGDYPRAISALERAQPLLADDQAVCKALGMAYVWTGDPDHGAEILAHLDYADEVREELGIWVYAWQERGRDDLAAYAQRAAQAMAAIH
>NC_009767.1|WP_157042664.1|3858169_3858313_-|hypothetical-protein
MACALIWLWIPNPVYGPLNLMVDAFGLPAAAWLVKPRTALSALALAC
>NC_009767.1|WP_041330898.1|3857897_3858095_-|hypothetical-protein
MVPSGCAWRCEHLCCAGVLDDTSLHSFGAPPLVTREWLPVSFEWSNYLRLFDLLPLEHYPLNSRS
>NC_009767.1|WP_012121455.1|3856646_3857693_+|sigma-70-family-RNA-polymerase-sigma-factor
MSRMMQQHPWDELDERQEIVNEDDTAPVTDIEEMTAETLEETLEPDSTLDSIQHYLQEIGRVPLLTAAEEIELAERMERGAAAERRLASGEDLSPQLRQALLADVAAAQEARRHLIQANLRLVVSIAKKYVGRGLSLLDLIQEGNIGLMRAVEKFDYHKGNRFSTYATWWIRQAVTRAIAEQGRTIRLPVHMSESVGQVKRTADRLAQALERQPTPEEIATALGQPTERIERVLEASRRPVSLETPVGEDGEHTLGDFLQDSELPTPVEAASQQLLRRDLAAALDRLNERERRIIDLRYGLVDGQRRTLEEVGRVLGMTRERARQIEAEALRRLRAPDVGLHLRDYLE
>NC_009767.1|WP_012121454.1|3854883_3856116_+|cysteine-desulfurase-like-protein
MSALDLTWIRAQFPALMQEMNGRPVVFFDGPGGTQVPRRVIDAMAEYLTLYNSNTHGAFATSQRTDATVDAARVAMADFLGCDADEVVFGPNMTTLTFAISRAFGRDIRPGDEIVVTRLDHDANVAPWQALEERGAIIRMVDIDVEDCTLDMADMARAINSRTKLVAVGYASNAVGTINDVATITRMAHDVGALVYIDAVHYAPHGPIDVRALDCDFLACSPYKFFAPHMGALYGKREHLERLRPYKVRPASDAVPDRWETGTKNHEGLAGVTAAIDYLAELGRRVKPTTTRRAALVQAMEAIQAYERTLSHHLIAGLLAIPGLTFYGISDPARFAWRTPTVAVRLEGSTPRELARRLGDQGIFCWDGNYYAINLTERLGVEADGGMLRIGLVHYNTAEEIDRLLEVMRG
>NC_009767.1|WP_083760320.1|3853935_3854619_+|DUF11-domain-containing-protein
MPTNTTFVSLAAPDGWNCTTPGVGDIGAITCTRPGFGLGNATFTLRVRVKQGTPVSTTLSLNANIASATSDPNTTNNPASSTTTVTVNADLSVRISADKPIIRPGETLTYTVEANNSGPEFANDVTLTMAVPDGTAFVSLTRPPGWDCTTPAVGATGPITCTTAALDVATDTFVLTVTANAASEDTTITNTTTIASPVTDGDPGNNTATVSTALWTKLRVYLPLISR
>NC_009767.1|WP_012121461.1|3864906_3865611_-|ribose-5-phosphate-isomerase-RpiA
MDDHLYRRRAAERALDYVESGMAIGLGTGSTASFMLRGLAARLADGRLQRVVGVPTSEQTAVLARELGIPLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSKRVERLGERSPLPVEVVTFGMPLCIRRLAALGGEPVLRCDHSGAPFVTDEGNLILDCHFGVIADPEALAAAICAIPGVVAHGLFLGMASLAVIAGPDGIVELECPDASRR
>NC_009767.1|WP_012121462.1|3865624_3865999_-|hypothetical-protein
MWSVHRVALLILALVAVGGAGVGIWYENQQRSAERHLVFTVPPGSVARLAAGEQLEILPQTIELSLRGKDTLVIRNDDVQPIQVGPFKIDPGQQFEQRYYNPGTYELICTLHQSQRLRIVVSRE
>NC_009767.1|WP_012121463.1|3866002_3866596_-|SCO-family-protein
MRRSLRMALLIAFAIIVSACGRYEFRGVTLDPPKEAPDFTLTDFDGKPFHLSDHRGKVVILFFGFTNCPDMCPAALSDMAAARRKLGADAEKVQGVFVSLDPDRDTPERLKRYVTAFDPTFIGVRGSETELAPAVKDYGVTYMRRELPGSALGYTIDHSTFIYVIDAAGRWRLLFTHGMPVDDIVSDLRYLVRRGGA
>NC_009767.1|WP_157042665.1|3866606_3866816_-|hypothetical-protein
MIHKFVAEVDAETLCPCRRAERSEVSRPPCGRSRQRISVSITRHPHRFHEWYTMTWLQQMTFNADGSAF
>NC_009767.1|WP_012121464.1|3866865_3867240_+|(2Fe-2S)-binding-protein
MPTLTVAGKTAEWSADKRLVNAIEDMGIHIGHRCGGQARCTTCRVTFISGEPDTMTAAEYQKLSERGLLGQYRLSCQILCTHDMEVEPIMTLENQEGWSDTGPRPADVVEPVAEWLPKSTFGVS
>NC_009767.1|WP_083760321.1|3867843_3868062_-|nucleotidyltransferase-domain-containing-protein
MISVALFGSHARNEADEASDWDVLIIVRNLPERLLERYRLLKRILPPAWRGRTSILAKTLAEFEATLPPLYL
>NC_009767.1|WP_041330906.1|3868306_3870880_-|DEAD/DEAH-box-helicase
MTDFIDILRSARGYNNQIVHVERLPARAARYAEPSAPLPPPLAAALAARGISRLYTHQAAALDAARAGLHVGIVTATASGKTLCYQLPTIEATLSDPAARALFLFPTKALAADQLRALYTLLDALKAAGGPALMAATLDGDTPRATRDRVRAGASIILSNPDLLHRTLLPDHARWQSVLAQLRFVVLDEAHTYRGVFGTHVALIMRRLRRLCAHYGSAPQFICCSATSANPQHHLAALIGDEVRVIDDDGAPQGERTFLFWNPPVIDNQRVPTWMRTLLPENGQRRSTNVETANVLATLVRAGVKTLAFARTRRSAELVLRYARETLDNGDSVENGHNPSMPLAEQIAAYRAGYTVEDRRRLEQAFARGDLRGLVSTNALELGVDIGGVDAVVIGGFPGTIASAWQQAGRAGRAQGKSLAALVAQDDPLDQFYMRHPAEFFCRPHEHARIALDNPYILRDQLRCAAAELPLHDADDLWFGATFAKLRDWLLQRGEVTTRPDGRAAYAGDPRPAAHVNIRSADGNPIDLIDIDTGRRIEQIAATRAPFEVFPGAVYMHQGNTYVVEALTSRQALARRAQIEYYTRTIDETEIAVRQVRQQRQVGPTTLALGVVDVTRQVVGYKRKKHYTDDVISEHELTMPPQTFRTIAVWWTISDSACRQIAQVCDSVLDALHAMEHAVIGLLPLFAQCDRADIGGLSTDAHPDTGAATIFVYDGVPGGVGIAEVGYEQAAQWWEQTWRLLVDCPCSEGCPACIQSPKCGNANQHLSKIGAATLAALLTGHAPPLPDAFGRHATSAAFIEEMQQQLARARSEPPGVRRTAVLVALRYRIATARASITDDTGRATLAMIEAEANALQR
>NC_009767.1|WP_012121466.1|3871145_3871895_+|hypothetical-protein
MSRACPRPCPFVHRHRHDLIRLRDHLAEGHRCADAWVALAHLVREPWQRLDCLERASAIDPNDQNLRIAHLEHYVVLHPEDTQAAEELREAKARRALERYKPRIFRHQDASQPIGVILRALHAVNDADLEVALEEQERLRRLGRPMLLGDLLVLRGKTAPEALARALTLQSRLRAANGAMPRTLSEYLMAKGHVTPDQLERALIEQIRLHTSGKHEPLGEILLRQGAVDTTILQRAFQQHMHDAMTAFV
>NC_009767.1|WP_012121467.1|3872570_3873224_+|pyrimidine-5'-nucleotidase
MALAAILFDLDGTLYPRSAGVQRALDERMNAYVQQITGCALDEAPALRHSWFIRYGTTLTGLQREYHVDVEDYLRAIHNIRLDTFLARDRELDALLDRLDLRRAIFTNSPAEHAARVLRALGVAQHFPLIFDIRFFEFQPKPNRIAYTRALDALGVTASETVLIEDTPQNLPPARELGMRTILIDEQGTHSPDGIADHVVPDIRAALRLVNGDVGRI
>NC_009767.1|WP_012121468.1|3873300_3874248_-|prohibitin-family-protein
MSQGQEGRAFQNPDARGRSVSALVALSLIAVVAIFLVSNAVTTIEAGTRGVLKTFGEITGVLEEGLHFRMPFITSVTVVEVRTQRYESNSSAASRDLQTVTTQVVINYRPDSGQVDRLVREIGVDYERRVVDPAIQEAIKAATARFTAEELITRRPEVSDLIQRGLSERLTPRGVIVESVSITDFNFSPEFARAIEAKQVAEQDALRAARELERARIEAQQQVARAEAEARARLEIARAEAEALRLQREVISAELLQLRFIERWDGVMPRFVGGENSLLPMLNIPSSEVLGDRAPAPQRAPAEEPAPAAEPTASP

Crispr_ID: NC_009767_76

• CRISPR_ID: NC_009767_76
• CRISPR_location: 3868074-3868179
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas3

Consensus repeat of NC_009767_76

Consensus_repeat	Method
CAGCGCTTTTTCGAGCGCAGCGACAACCTCACCAGG	CRISPRCasFinder

spacers of NC_009767_76

>76.1|3868110|34|NC_009767|CRISPRCasFinder
GCATGCTCGCACAGGTTTGCACTTATGGGGAGAG

CRISPR arrays and Neighbor proteins around NC_009767_76

CRISPR arrays

The CRISPR arrays of NC_009767_76

>merge|NC_009767|76|3868074-3868179|CRISPRCasFinder
CAGCGCTTTTTCGAGCGCAGCGACAACCTCACCAGGGCATGCTCGCACAGGTTTGCACTTATGGGGAGAGCAGCGCTTTTTCGAGCGCAGCGACAACCTCGCCAGG

>NC_009767|76|67|3868074-3868179|CRISPRCasFinder
CAGCGCTTTTTCGAGCGCAGCGACAACCTCACCAGG	GCATGCTCGCACAGGTTTGCACTTATGGGGAGAG
CAGCGCTTTTTCGAGCGCAGCGACAACCTCGCCAGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121461.1|3864906_3865611_-|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl|CDD|234816
NC_009767.1|WP_012121458.1|3860675_3860888_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121470.1|3876486_3876876_-|DUF3592-domain-containing-protein	unknown	unknown	gnl|CDD|378822
NC_009767.1|WP_012121466.1|3871145_3871895_+|hypothetical-protein	unknown	unknown	gnl|CDD|237974
NC_009767.1|WP_041330906.1|3868306_3870880_-|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	gnl|CDD|274800
NC_009767.1|WP_012121473.1|3879912_3881607_+|proline--tRNA-ligase	unknown	unknown	gnl|CDD|236405
NC_009767.1|WP_012121462.1|3865624_3865999_-|hypothetical-protein	unknown	unknown	gnl|CDD|259988
NC_009767.1|WP_012121471.1|3876887_3878978_-|thioredoxin-domain-containing-protein	unknown	unknown	gnl|CDD|224250
NC_009767.1|WP_012121460.1|3863086_3864766_+|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|234861
NC_009767.1|WP_012121464.1|3866865_3867240_+|(2Fe-2S)-binding-protein	unknown	unknown	gnl|CDD|223706
NC_009767.1|WP_041330900.1|3860248_3860689_-|PIN-domain-containing-protein	unknown	unknown	gnl|CDD|350259
NC_009767.1|WP_083760321.1|3867843_3868062_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_012121468.1|3873300_3874248_-|prohibitin-family-protein	unknown	unknown	gnl|CDD|259799
NC_009767.1|WP_157042667.1|3881708_3882752_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|366501
NC_009767.1|WP_012121469.1|3874744_3876472_+|membrane-protein	unknown	unknown	gnl|CDD|182059
NC_009767.1|WP_157042666.1|3879681_3879849_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121459.1|3860977_3862975_-|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl|CDD|234792
NC_009767.1|WP_157042665.1|3866606_3866816_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121463.1|3866002_3866596_-|SCO-family-protein	unknown	unknown	gnl|CDD|239266
NC_009767.1|WP_012121467.1|3872570_3873224_+|pyrimidine-5'-nucleotidase	unknown	unknown	gnl|CDD|319791

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_041330906.1|3868306_3870880_-|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	1e-15	51.5	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121461.1|3864906_3865611_-|ribose-5-phosphate-isomerase-RpiA	gnl|CDD|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	2.03413e-114
NC_009767.1|WP_012121471.1|3876887_3878978_-|thioredoxin-domain-containing-protein	gnl|CDD|224250	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones].	0
NC_009767.1|WP_012121470.1|3876486_3876876_-|DUF3592-domain-containing-protein	gnl|CDD|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	2.1522e-07
NC_009767.1|WP_041330900.1|3860248_3860689_-|PIN-domain-containing-protein	gnl|CDD|350259	cd18692, PIN_VapC-like, uncharacterized subfamily of the VapC-like nuclease family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.27485e-49
NC_009767.1|WP_041330906.1|3868306_3870880_-|DEAD/DEAH-box-helicase	gnl|CDD|274800	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase. A conserved gene neighborhood widely spread in the Actinobacteria contains this uncharacterized DEAH-box family helicase encoded convergently towards an operon of genes for protein homologous to type II secretion and pilus formation proteins. The context suggests that this helicase may play a role in conjugal transfer of DNA.	0
NC_009767.1|WP_012121473.1|3879912_3881607_+|proline--tRNA-ligase	gnl|CDD|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	9.91097e-110
NC_009767.1|WP_012121462.1|3865624_3865999_-|hypothetical-protein	gnl|CDD|259988	cd13921, Amicyanin, Amicyanin is a type I blue copper protein that plays an essential role in electron transfer. In Paracoccus denitrificans bacteria, amicyanin acts as an intermediary of a three-member redox complex along with methylamine dehydrogenase (MADH) and cytochrome c-551i. The electron is transferred from the active site of MADH via the amicyanin copper ion to the cytochrome heme iron. The electron transfer from MADH to cytochrome c-551i does not involve a ternary complex but occurs via a ping-pong mechanism in which amicyanin uses the same interface for the reactions with MADH and cytochrome c-551i.	0.000340028
NC_009767.1|WP_012121460.1|3863086_3864766_+|dihydroxy-acid-dehydratase	gnl|CDD|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NC_009767.1|WP_012121464.1|3866865_3867240_+|(2Fe-2S)-binding-protein	gnl|CDD|223706	COG0633, Fdx, Ferredoxin [Energy production and conversion].	1.0511e-13
NC_009767.1|WP_012121466.1|3871145_3871895_+|hypothetical-protein	gnl|CDD|237974	PRK15489, nfrB, glycosyl transferase family protein.	0.000550894
NC_009767.1|WP_083760321.1|3867843_3868062_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	4.66403e-07
NC_009767.1|WP_012121468.1|3873300_3874248_-|prohibitin-family-protein	gnl|CDD|259799	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prohibitin (a lipid raft-associated integral membrane protein). Individual proteins of the SPFH (band 7) domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. These microdomains, in addition to being stable scaffolds, may also be dynamic units with their own regulatory functions. Prohibitin is a mitochondrial inner-membrane protein which may act as a chaperone for the stabilization of mitochondrial proteins. Human prohibitin forms a hetero-oligomeric complex with Bap-37 (prohibitin 2, an SPFH domain carrying homolog). This complex may protect non-assembled membrane proteins against proteolysis by the m-AAA protease. Prohibitin and Bap-37 yeast homologs have been implicated in yeast longevity and in the maintenance of mitochondrial morphology.	1.78943e-75
NC_009767.1|WP_157042667.1|3881708_3882752_-|methyltransferase-domain-containing-protein	gnl|CDD|366501	pfam01170, UPF0020, Putative RNA methylase family UPF0020. This domain is probably a methylase. It is associated with the THUMP domain that also occurs with RNA modification domains.	6.35877e-38
NC_009767.1|WP_012121469.1|3874744_3876472_+|membrane-protein	gnl|CDD|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	7.02645e-06
NC_009767.1|WP_012121459.1|3860977_3862975_-|excinuclease-ABC-subunit-UvrC	gnl|CDD|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NC_009767.1|WP_012121463.1|3866002_3866596_-|SCO-family-protein	gnl|CDD|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	5.78659e-60
NC_009767.1|WP_012121467.1|3872570_3873224_+|pyrimidine-5'-nucleotidase	gnl|CDD|319791	cd02604, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to Saccharomyces cerevisiae Phm8p and Sdt1p. This family includes Saccharomyces cerevisiae Phm8p (phosphate metabolism protein 8) and Sdt1p (Suppressor of disruption of TFIIS). Phm8p participates in the ribose salvage pathway, it catalyzes the dephosphorylation of nucleotide monophosphates to nucleosides, its preferred substrates are nucleotide monophosphates AMP, GMP, CMP, and UMP. Phm8p is also a lysophosphatidic acid phosphatase, dephosphorylating lysophosphatidic acids (LPAs) to monoacylglycerol in response to phosphate starvation. Sdt1p is a pyrimidine and pyridine-specific 5'-nucleotidase; it is an NMN/NaMN 5'-nucleotidases involved in the production of nicotinamide riboside and nicotinic acid riboside, and is a pyrimidine 5'-nucleotidase with high specificity for UMP and CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.33671e-49

Protein sequences

>NC_009767.1|WP_083760321.1|3867843_3868062_-|nucleotidyltransferase-domain-containing-protein
MISVALFGSHARNEADEASDWDVLIIVRNLPERLLERYRLLKRILPPAWRGRTSILAKTLAEFEATLPPLYL
>NC_009767.1|WP_012121464.1|3866865_3867240_+|(2Fe-2S)-binding-protein
MPTLTVAGKTAEWSADKRLVNAIEDMGIHIGHRCGGQARCTTCRVTFISGEPDTMTAAEYQKLSERGLLGQYRLSCQILCTHDMEVEPIMTLENQEGWSDTGPRPADVVEPVAEWLPKSTFGVS
>NC_009767.1|WP_157042665.1|3866606_3866816_-|hypothetical-protein
MIHKFVAEVDAETLCPCRRAERSEVSRPPCGRSRQRISVSITRHPHRFHEWYTMTWLQQMTFNADGSAF
>NC_009767.1|WP_012121463.1|3866002_3866596_-|SCO-family-protein
MRRSLRMALLIAFAIIVSACGRYEFRGVTLDPPKEAPDFTLTDFDGKPFHLSDHRGKVVILFFGFTNCPDMCPAALSDMAAARRKLGADAEKVQGVFVSLDPDRDTPERLKRYVTAFDPTFIGVRGSETELAPAVKDYGVTYMRRELPGSALGYTIDHSTFIYVIDAAGRWRLLFTHGMPVDDIVSDLRYLVRRGGA
>NC_009767.1|WP_012121462.1|3865624_3865999_-|hypothetical-protein
MWSVHRVALLILALVAVGGAGVGIWYENQQRSAERHLVFTVPPGSVARLAAGEQLEILPQTIELSLRGKDTLVIRNDDVQPIQVGPFKIDPGQQFEQRYYNPGTYELICTLHQSQRLRIVVSRE
>NC_009767.1|WP_012121461.1|3864906_3865611_-|ribose-5-phosphate-isomerase-RpiA
MDDHLYRRRAAERALDYVESGMAIGLGTGSTASFMLRGLAARLADGRLQRVVGVPTSEQTAVLARELGIPLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSKRVERLGERSPLPVEVVTFGMPLCIRRLAALGGEPVLRCDHSGAPFVTDEGNLILDCHFGVIADPEALAAAICAIPGVVAHGLFLGMASLAVIAGPDGIVELECPDASRR
>NC_009767.1|WP_012121460.1|3863086_3864766_+|dihydroxy-acid-dehydratase
MSSDLKRHSRTITDGRTRAGARAMLKAIGFTDEDLAKPIIGIANTWIETMPCNINLRALAARVKEGVRAAGGTPMEFNTVAISDGVTMGTEGMKASLISRDLIADSIELMGRGYMFDAIIALVACDKTIPGAAMGLTRLNVPGFLLYGGSIAPGHWRGKEITIQHVYEAIGAVAAGKMTDEELKEIEDAACPGPGACGGQYTANTMATVMEIIGLSPIGTAAVPAADPRKDSVGYRAGQLIMDVLRRDLKPRDILTRAAFENAIASVALTGGSTNAVLHLLALAREAGVPLTLDDFDTISRRTPLCCDLMPSGKYSAIHVDQAGGIQVIAKRLVDGGFAHGDAITVTGRTLAEEAADAVETPGQDVIRPLDNPIKPTGGLLVLRGNLAPEGSVVKLFGYERTYHRGPARVFDSEEAAMAAIVGGEIRPDDIVVIRYEGPRGGPGMREMLGVTSAIVGAGLGQSVSLVTDGRFSGATRGVMIGHVAPEAARGGPLAIVQEGDEIEINLDERRVDLVLSEEEIADRLLAWQPPAPRFEWGVMARYSALVSSASEGAVLVTP
>NC_009767.1|WP_012121459.1|3860977_3862975_-|excinuclease-ABC-subunit-UvrC
MSDLMHTTVADPIALEERLRAVPLAPGVYLWKNAQGKIIYIGKSKRLRDRMRSYFARTDDPYGKTARLVAQIADFQVIVTSNELEALLLEMTLIKQHRPRFNVLLKDDKSYPYIKVTLHEPWPRIVATRNPRWEEGARYFGPYSSAGAVYRTLDQLNRLFAFRPPSRCPDDKFNRHRRLGKPCLYYDIKRCLGPCVPGLVNQNDYRATVESVCRFLEGKSDLVAKILRRQMEEAAERLDFERAARLRDSIRDIELIGQRQQVLRHDDADQDVIGLAREEGMAVVQVLRIRAGKLISAESFPLQNAEGERDESLLASFLTQFYDAAAELPATLLLPAPLDDLAIIEQWLAQKAGRKVALHTPQRGEKRRLVELAEQNARQKLDELRLQWLNSEQRAVAGLTEVRDLLGLSALPTRIECFDVSNTQGSHSVGAMVVFEHGEPKKSRYRKFRIKTVEGANDVASIQEVLRRRFRRAAMVIGEEEQPADERVVNGQTDAAEQEDGEKTDAPGSQSDLERQETWAELPDLILIDGGIGQVNGALHVLRDLCFEHIPVVGVVKGPNRDRFDLLIPGASDLIVLERESAALRLIRRIDEEADRFAKDYHRKLRSKSATASRLEEIPGIGPKRRQLLLKRFGSLDGIRNATVDEIAAVPGMTRKAAEELKSLL
>NC_009767.1|WP_012121458.1|3860675_3860888_-|hypothetical-protein
MSVIEFQTHVEHGTIDLPEEYRHLVTGRVRIIILINEDEDEEDMVEFLLDHPYHSDSFTPLKRDEIYERR
>NC_009767.1|WP_041330900.1|3860248_3860689_-|PIN-domain-containing-protein
MSAGSGSSSLVFIDTNIWLYAFSQIQDIQKAHRARVLIRGTSQIVLSTQVINEVAVNLLRKFQAAESDIRKRIRSFYRKYLIIEHSRAILLHASDLRTVYRVSYWDSLILSSALAAGATILYPEDMQEGLMVANQLTIVNPLRDSS
>NC_009767.1|WP_041330906.1|3868306_3870880_-|DEAD/DEAH-box-helicase
MTDFIDILRSARGYNNQIVHVERLPARAARYAEPSAPLPPPLAAALAARGISRLYTHQAAALDAARAGLHVGIVTATASGKTLCYQLPTIEATLSDPAARALFLFPTKALAADQLRALYTLLDALKAAGGPALMAATLDGDTPRATRDRVRAGASIILSNPDLLHRTLLPDHARWQSVLAQLRFVVLDEAHTYRGVFGTHVALIMRRLRRLCAHYGSAPQFICCSATSANPQHHLAALIGDEVRVIDDDGAPQGERTFLFWNPPVIDNQRVPTWMRTLLPENGQRRSTNVETANVLATLVRAGVKTLAFARTRRSAELVLRYARETLDNGDSVENGHNPSMPLAEQIAAYRAGYTVEDRRRLEQAFARGDLRGLVSTNALELGVDIGGVDAVVIGGFPGTIASAWQQAGRAGRAQGKSLAALVAQDDPLDQFYMRHPAEFFCRPHEHARIALDNPYILRDQLRCAAAELPLHDADDLWFGATFAKLRDWLLQRGEVTTRPDGRAAYAGDPRPAAHVNIRSADGNPIDLIDIDTGRRIEQIAATRAPFEVFPGAVYMHQGNTYVVEALTSRQALARRAQIEYYTRTIDETEIAVRQVRQQRQVGPTTLALGVVDVTRQVVGYKRKKHYTDDVISEHELTMPPQTFRTIAVWWTISDSACRQIAQVCDSVLDALHAMEHAVIGLLPLFAQCDRADIGGLSTDAHPDTGAATIFVYDGVPGGVGIAEVGYEQAAQWWEQTWRLLVDCPCSEGCPACIQSPKCGNANQHLSKIGAATLAALLTGHAPPLPDAFGRHATSAAFIEEMQQQLARARSEPPGVRRTAVLVALRYRIATARASITDDTGRATLAMIEAEANALQR
>NC_009767.1|WP_012121466.1|3871145_3871895_+|hypothetical-protein
MSRACPRPCPFVHRHRHDLIRLRDHLAEGHRCADAWVALAHLVREPWQRLDCLERASAIDPNDQNLRIAHLEHYVVLHPEDTQAAEELREAKARRALERYKPRIFRHQDASQPIGVILRALHAVNDADLEVALEEQERLRRLGRPMLLGDLLVLRGKTAPEALARALTLQSRLRAANGAMPRTLSEYLMAKGHVTPDQLERALIEQIRLHTSGKHEPLGEILLRQGAVDTTILQRAFQQHMHDAMTAFV
>NC_009767.1|WP_012121467.1|3872570_3873224_+|pyrimidine-5'-nucleotidase
MALAAILFDLDGTLYPRSAGVQRALDERMNAYVQQITGCALDEAPALRHSWFIRYGTTLTGLQREYHVDVEDYLRAIHNIRLDTFLARDRELDALLDRLDLRRAIFTNSPAEHAARVLRALGVAQHFPLIFDIRFFEFQPKPNRIAYTRALDALGVTASETVLIEDTPQNLPPARELGMRTILIDEQGTHSPDGIADHVVPDIRAALRLVNGDVGRI
>NC_009767.1|WP_012121468.1|3873300_3874248_-|prohibitin-family-protein
MSQGQEGRAFQNPDARGRSVSALVALSLIAVVAIFLVSNAVTTIEAGTRGVLKTFGEITGVLEEGLHFRMPFITSVTVVEVRTQRYESNSSAASRDLQTVTTQVVINYRPDSGQVDRLVREIGVDYERRVVDPAIQEAIKAATARFTAEELITRRPEVSDLIQRGLSERLTPRGVIVESVSITDFNFSPEFARAIEAKQVAEQDALRAARELERARIEAQQQVARAEAEARARLEIARAEAEALRLQREVISAELLQLRFIERWDGVMPRFVGGENSLLPMLNIPSSEVLGDRAPAPQRAPAEEPAPAAEPTASP
>NC_009767.1|WP_012121469.1|3874744_3876472_+|membrane-protein
MRILLIVFLVIVPLLLPATPARAVGVVGDGTPGSCTRDALAAALASGGEIRFNCGGAPVTIPVTTTLDIRTAAVIDGAGVITLDGQGTTRILYVNKLSAGTKLALHNIRLINGKSSGFEPSFGGCVYSRQSAVELNNVVFDGCRAGNGAALYVYGGMLTIDQSTFDGNQASDGGAIYALQGGRVVVRNSSFTANTATGDGGALLMDNSSLEVSNSRFEANKALGTQSQPNIGLGGAIYGNNPGAAITIVNSQFRQNYARLQGGAVFADYNATLTITNSTFTNNRSDSQGGAVGTWKTQALLSACIFTGNSSGGGGGAVLSGEATTMSVNRSVFTANIAGRDGGALYNYTGPLTINDSSFDANRAGTDGRGDTRGGAIVNYRAPMSINASTFTGNIVEGRNGFGGAIGNAGSATIINSTLYDNAAEYGGAIYGLRDTRMVNTTIVRNRGTNGANLNWEQTTTMTLKNTLIVHSGDGRSCRRAVSTDEGGNVQEGDTNCFPGQPAVSLGLDAPAMHGGPTFTIALPSGSPAIDAGRDCPPSDQRGFPRVGACDSGSFEFGSIAPNLREAAFLPFVSR
>NC_009767.1|WP_012121470.1|3876486_3876876_-|DUF3592-domain-containing-protein
MSGEVLFVLLFCALPLVIGGLVAFGFIQRMYHFQEILADGVETDALVVRKYRSVASLGNRHRLVYEYRDASGKTYRKDDGVFPSEYDRLQEGDAFRVVYSAKRPHISTTKAAVDQSRATQAGEAEKQRE
>NC_009767.1|WP_012121471.1|3876887_3878978_-|thioredoxin-domain-containing-protein
MPNAEPTRRPNRLINETSPYLLQHAYNPVDWYPWGEEAFARAQAEDKPILLSVGYAACHWCHVMEHESFEDEETAALMNRYFVNVKVDREERPDVDSIYMTAVQAMTGSGGWPMTVFLTPDGTPFFAGTYFPPEDRWQMPSFQRVLRSVAEAYATRRNDLLARGRELVERMREASMMQIPGSTLTPAALDSAFMGLQQAFDPEYGGFGRAPKFPQPMTLEFLLRYAARTGRGMEMLERTLRAMAEGGMYDQIGGGFHRYSVDAQWLVPHFEKMLYDNALLARVYLETFQATGNAFYRRIAEETLTYMLREMQHPDGGFFSTQDADSLPTADATHKHEGAFFVWTPAEIREALGADATVFSALYGVTDRGNFEGKNILHVQRSPAEVARVMGMSVERVESIAERGRRVLFAVRQHRPKPELDDKVLTAWNGMALRAFALGAIVLDREEYRTAAVRCAEFVLRELRRADGELLRSWRQGVANPTPAFLEDYALLADGLLALYEATFDPRWLLEARALADALLERFWDDGIGGFYDTGSHHEQLVIRPRDTGDNATPSGSSAAADVLLRLALIFDEPRYRERALTVLSAMAPLMERYPTGFGRYLAAAEFALSQPREIALIGDPEAADTRALAAIALKPFLPNRVVVLARPGEDPPRIPSPLLAGRTPIDGRAAAYVCQNYACRLPVTKPADLAAQLQP
>NC_009767.1|WP_157042666.1|3879681_3879849_+|hypothetical-protein
MFCIPAPFFPASRHTLREKEQCSADRRDVFPRYTLREKEMFAETPDAGDQSPLDD
>NC_009767.1|WP_012121473.1|3879912_3881607_+|proline--tRNA-ligase
MRISALFGRTLRETPADIDYPALRLMLRAGLARLSAGALAFLPIGTRVLRRLEAMAHEELTRIGAQEIHLPPVRTLSASDRVQSRLLPASSTMHGSDQSRRLLAFDPTDTTTIASLAASEIASYRQLPALLYQRHPISCNDCRSSWLREEIALTVYALGGGAHELEETGTQVYSAFERIFRRCDMHLIAAEAGYTGENDQVTRAYVAVSEHGDIDLMICESCSYTAIREAARTAFDSTLATSMMKDEPDHPEAIATPNCATIADLARFCGVPESATAKAVFFDSPEHGLIFAVIRGDRAINIKKLCLVAGVANLTPARPEQIDAIGAVAGYASPVGLPSHTSNRVLIVADPSVTTGAPLIAGANRHGYHLRNVVYGRDWRADRIADISLAHPGDPCNRCGAPLRQSSGFTIVHAIHHGAFAQDATFLDQEGVSRPIVLASFRMLLERALLTIIEQHCDQAGIVWTPETAPFDVHLIRLGKQDATRQAADALYDELIAAGIAVLYDDRNETAGVKFNDADLIGLPLRLVIGDRFLTDGLVEIKQRATGMITKMPRQEIIAEVQKA
>NC_009767.1|WP_157042667.1|3881708_3882752_-|methyltransferase-domain-containing-protein
MFDIECDTLEGLEPYALEEIRERFGRRCTSIVLRSGRIRMVYTGELQALLRLRSVLAAYLVVTFDVPRPRALLGHQHFTRLLRVLEMVRSLGVPEQYRTMRLSAAGEDSSVLTRLKETLARHIGLIVAPDEGDLLIRLRRATQKTGWEVLVRLSSRPLATREWRVCNWPGALNATLASVMMRLTQPSEVDRVLNLACGSGTLLIERLFLAPAQLAIGCDLDREALRCAQRNLEAAGFTQAVRLEQWDATLLPLETESIDMICADLPFGQLIGSHRDNEALYPRLITEAARVAASGARMCLLTHEVRLIERVFERYAGLWTLTHVVRVRTGGMTPRVYLALRTTTPVS

Crispr_ID: NC_009767_77

• CRISPR_ID: NC_009767_77
• CRISPR_location: 3983059-3983165
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_77

Consensus_repeat	Method
GAACATTGAACGTTGCGCACCGGCAGGCGCGC	CRISPRCasFinder

spacers of NC_009767_77

>77.1|3983091|43|NC_009767|CRISPRCasFinder
ACCACAGGTGCGCCCCAGCGTCGTCCCGCCACGATGACGGTGT

CRISPR arrays and Neighbor proteins around NC_009767_77

CRISPR arrays

The CRISPR arrays of NC_009767_77

>merge|NC_009767|77|3983059-3983165|CRISPRCasFinder
GAACATTGAACGTTGCGCACCGGCAGGCGCGCACCACAGGTGCGCCCCAGCGTCGTCCCGCCACGATGACGGTGTGAACATTGAACGTTGCGCACCGGCAGGCGCGC

>NC_009767|77|68|3983059-3983165|CRISPRCasFinder
GAACATTGAACGTTGCGCACCGGCAGGCGCGC	ACCACAGGTGCGCCCCAGCGTCGTCCCGCCACGATGACGGTGT
GAACATTGAACGTTGCGCACCGGCAGGCGCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121562.1|3995303_3996248_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187566
NC_009767.1|WP_012121558.1|3987693_3989664_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl|CDD|236054
NC_009767.1|WP_012121557.1|3986947_3987628_+|succinate-dehydrogenase-cytochrome-b-subunit	unknown	unknown	gnl|CDD|239578
NC_009767.1|WP_012121561.1|3993999_3995307_-|nucleotide-sugar-dehydrogenase	unknown	unknown	gnl|CDD|223749
NC_009767.1|WP_041330925.1|3971623_3972205_+|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl|CDD|379821
NC_009767.1|WP_012121550.1|3977990_3978635_-|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl|CDD|223643
NC_009767.1|WP_012121546.1|3972220_3973054_-|AmmeMemoRadiSam-system-protein-B	unknown	unknown	gnl|CDD|153373
NC_009767.1|WP_012121559.1|3989757_3990507_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	unknown	unknown	gnl|CDD|181038
NC_009767.1|WP_012121547.1|3973704_3976053_+|hypothetical-protein	unknown	unknown	gnl|CDD|132846
NC_009767.1|WP_012121543.1|3968909_3970412_+|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224983
NC_009767.1|WP_012121551.1|3978644_3979586_-|ornithine-carbamoyltransferase	unknown	unknown	gnl|CDD|234835
NC_009767.1|WP_012121548.1|3976291_3977311_-|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl|CDD|213356
NC_009767.1|WP_012121553.1|3981383_3982751_+|argininosuccinate-lyase	unknown	unknown	gnl|CDD|179143
NC_009767.1|WP_041330933.1|3990828_3991029_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121544.1|3970411_3971233_+|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|235726
NC_009767.1|WP_012121549.1|3977312_3977975_-|potassium-transporter-TrkA	unknown	unknown	gnl|CDD|236541
NC_009767.1|WP_012121556.1|3985772_3986651_+|protein-tyrosine-phosphatase	unknown	unknown	gnl|CDD|319972
NC_009767.1|WP_012121560.1|3991573_3994024_+|hypothetical-protein	unknown	unknown	gnl|CDD|380294
NC_009767.1|WP_012121554.1|3983274_3985125_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|379902
NC_009767.1|WP_012121555.1|3985240_3985615_-|response-regulator	unknown	unknown	gnl|CDD|381100

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121562.1|3995303_3996248_-|SDR-family-oxidoreductase	gnl|CDD|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.74648e-167
NC_009767.1|WP_012121558.1|3987693_3989664_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	gnl|CDD|236054	PRK07573, sdhA, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	0
NC_009767.1|WP_012121557.1|3986947_3987628_+|succinate-dehydrogenase-cytochrome-b-subunit	gnl|CDD|239578	cd03498, SQR_TypeB_2_TM, Succinate:quinone oxidoreductase (SQR)-like Type B subfamily 2, transmembrane subunit; composed of proteins with similarity to the SQRs of Geobacter metallireducens and Corynebacterium glutamicum. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. C. glutamicum SQR reduces low potential quinones such as menaquinone. SQR is also called succinate dehydrogenase (Sdh) or Complex II and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type B as they contain one transmembrane subunit and two heme groups. The heme and quinone binding sites reside in the transmembrane subunit. The transmembrane subunit of members of this subfamily is also called Sdh cytochrome b558 subunit based on the Bacillus subtilis protein. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron acceptor (quinone). The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes. Proteins in this subfamily from G. metallireducens and G. sulfurreducens are bifunctional enzymes with SQR and QFR activities.	1.33576e-67
NC_009767.1|WP_012121561.1|3993999_3995307_-|nucleotide-sugar-dehydrogenase	gnl|CDD|223749	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane].	0
NC_009767.1|WP_041330925.1|3971623_3972205_+|ribosome-associated-translation-inhibitor-RaiA	gnl|CDD|379821	pfam16321, Ribosom_S30AE_C, Sigma 54 modulation/S30EA ribosomal protein C-terminus. This domain often occurs at the C-terminus of proteins containing pfam02482.	2.59109e-29
NC_009767.1|WP_012121550.1|3977990_3978635_-|TrkA-family-potassium-uptake-protein	gnl|CDD|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	2.90724e-38
NC_009767.1|WP_012121546.1|3972220_3973054_-|AmmeMemoRadiSam-system-protein-B	gnl|CDD|153373	cd07361, MEMO_like, Memo (mediator of ErbB2-driven cell motility) is co-precipitated with the C terminus of ErbB2, a protein involved in cell motility. This subfamily is composed of Memo (mediator of ErbB2-driven cell motility) and similar proteins. Memo is a protein that is co-precipitated with the C terminus of ErbB2, a protein involved in cell motility. It is required for the ErbB2-driven cell mobility and is found in protein complexes with cofilin, ErbB2 and PLCgamma1. However, Memo is not homologous to any known signaling proteins, and its function in ErbB2 signaling is not known. Structural studies show that Memo binds directly to a specific ErbB2-derived phosphopeptide. Memo is homologous to class III nonheme iron-dependent extradiol dioxygenases, however, no metal binding or enzymatic activity can be detected for Memo. This subfamily also contains a few members containing a C-terminal AMMECR1-like domain. The AMMECR1 protein was proposed to be a regulatory factor that is potentially involved in the development of AMME contiguous gene deletion syndrome.	8.8016e-93
NC_009767.1|WP_012121559.1|3989757_3990507_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	gnl|CDD|181038	PRK07570, PRK07570, succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated.	0
NC_009767.1|WP_012121547.1|3973704_3976053_+|hypothetical-protein	gnl|CDD|132846	cd07207, Pat_ExoU_VipD_like, ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomonas. Even though VipD shows high sequence similarity with several functional regions of ExoU (e.g. oxyanion hole, active site serine, active site aspartate), it has been shown to have no phospholipase activity. This family includes ExoU from Pseudomonas aeruginosa and VipD of Legionella pneumophila.	1.27774e-05
NC_009767.1|WP_012121543.1|3968909_3970412_+|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	5.88663e-127
NC_009767.1|WP_012121551.1|3978644_3979586_-|ornithine-carbamoyltransferase	gnl|CDD|234835	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional.	0
NC_009767.1|WP_012121548.1|3976291_3977311_-|magnesium/cobalt-transporter-CorA	gnl|CDD|213356	cd12822, TmCorA-like, Thermotoga maritima CorA-like family. This family belongs to the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the Thermotoga maritima CorA_like family are found in all three kingdoms of life. It is a functionally diverse family, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes three Saccharomyces cerevisiae members: two plasma membrane proteins, the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	5.46752e-132
NC_009767.1|WP_012121553.1|3981383_3982751_+|argininosuccinate-lyase	gnl|CDD|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NC_009767.1|WP_012121544.1|3970411_3971233_+|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|235726	PRK06181, PRK06181, SDR family oxidoreductase.	2.62221e-55
NC_009767.1|WP_012121549.1|3977312_3977975_-|potassium-transporter-TrkA	gnl|CDD|236541	PRK09496, trkA, Trk system potassium transporter TrkA.	1.04731e-48
NC_009767.1|WP_012121556.1|3985772_3986651_+|protein-tyrosine-phosphatase	gnl|CDD|319972	cd16344, LMWPAP, low molecular weight protein arginine phosphatase. Low molecular weight protein arginine phosphatases are part of the low molecular weight phosphatase (LMWP) family. They share a highly conserved active site motif (V/I)CXGNTCRS. It has been shown that the conserved threonine, which in many LMWPTPs is an isoleucine, confers specificity to phosphoarginine over phosphotyrosine.	6.52633e-24
NC_009767.1|WP_012121560.1|3991573_3994024_+|hypothetical-protein	gnl|CDD|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	3.43436e-07
NC_009767.1|WP_012121554.1|3983274_3985125_-|PAS-domain-containing-protein	gnl|CDD|379902	pfam16927, HisKA_7TM, N-terminal 7TM region of histidine kinase. HisKA_7TM is an N-terminal region consisting of seven transmembrane domains found in Archaea and some bacteria. It is always found associated with histidine kinase.	1.27821e-74
NC_009767.1|WP_012121555.1|3985240_3985615_-|response-regulator	gnl|CDD|381100	cd17548, REC_DivK-like, phosphoacceptor receiver (REC) domain of DivK and similar proteins. Caulobacter crescentus DivK is an essential response regulator that is involved in the complex phosphorelay pathways controlling both cell division and motility. It localizes cell cycle regulators to specific poles of the cell during division. DivK contains a stand-alone REC domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.10118e-38

Protein sequences

>NC_009767.1|WP_012121553.1|3981383_3982751_+|argininosuccinate-lyase
MWGGRFDEGIDARMARFNNSFPFDQRMWREDIRGSMAWARQLAQAGVISTEERDTLLTGLETVFAEFANDRFEARPTDEDIHTAIERRLGELVGAVAGKLHTGRSRNDQVATDVRLWTMGAIQRIDDGVRALQQALLTQAEAAGDALMPGYTHLQRAQPVLLAHWLLSHFWSAQRDRERLTDCAKRTSVLPLGSGAIAGTPLAIDRAALAADLGMAAISPNSIDAVSDRDFVAEFLFCAALIGIHLSRLAEDMIIYSSAEFGFVVLADAYSTGSSLMPQKKNPDSFELLRGKAGRLTGDLVTVLTVLKGIPSAYDKDLQEDKEPLFDAADTLELALPVAAGAVATARFRHDRMRAALDDAMLATDAADYLVARGVPFREAHHVVGRLVREAEQRGVALSALPLDILLAAHPACGSDILQVFDMDRSAAQRRVPGATAPGSVREQIIRARQCLGEH
>NC_009767.1|WP_012121551.1|3978644_3979586_-|ornithine-carbamoyltransferase
MVRHFLSAADLTRAEVEALLDRAQTLKAEWRNGGHPRDANGALPLQGKTLALVFEKPSLRTRVAFEAGMTQLGGHGSYLSANDIDMGGRESVPDVARNLSRWVQAIAARVFRHATVETLARYATVPVINALSDREHPCQALADMLTLHEHYGRLEGLTLAYVGDGNNVAHSLMLLGATLGVNVRIGCPLDYRPDPEILALAERRAIERGVSVEVTPSPVEAVLGADAVYTDVWTSMGQEHEAARRRPVFQPYQVNAALMTHARSGALFMHCLPAHRGEEVTPDVIDGPQSVVFEQAENRLHVQKALILTLLGL
>NC_009767.1|WP_012121550.1|3977990_3978635_-|TrkA-family-potassium-uptake-protein
MHLIVVGCGRVGCLLAQQMSAEGHSVAVIDKNPQAFKRLGREFRGQTVLGVGFDRDTLREAGVERADALAAVTNGDNSNYITATVARDVFRVPNVVARIYDPQREAIYRELGIRTISSTSWAVHTIRRILRGDETVSSIQFGSGEVEIAEVTISGRLVGHFVRDLSVPGEIMPVVIVRRGRAFLPTPGVLLEDGDVVHVAVLATATGLLDSMVQ
>NC_009767.1|WP_012121549.1|3977312_3977975_-|potassium-transporter-TrkA
MNVLIVGGGKIGRNLAMFLNVEGRHSITLVEKQEQVAHALMRILPDIRVIEGDGCDPSVLREAGAEFADAVAAVTGDDEDNLVIAVLCKREFRVGRVAARINNPKNAWLFTRRMGVDLPIDTAQTIGRGLEADINLGAIVQLTRLREGRISLIEFTVSPESSAVGKTVAALRLPPDCLLTAILRGDDVILPSGETVIQAGDQVIALAYRDREASLSERFQ
>NC_009767.1|WP_012121548.1|3976291_3977311_-|magnesium/cobalt-transporter-CorA
MARLIRNTRQRAVSRAPARHLVVCQHDGRFDSTVEVAAISDLIQQKDQIVWVDLQNPRAEDLALLSDEFGFHPLAIEDATHPHERPKIDAYNGYYFLLFYALRYDAAQKRISSQQVSLFIGANYLVCIHQDPIAAIDETIRRWQRYEHDFGEDVAELLYHLLDTIVDEYFPILDALIERVEDVEAQIFDHFRPESLQEIFALKRELLLMRKIVASERDVLNVLIRREAPVYPRDMVAYFQDVYDHLIRITDSIDTYRDLLSSALDAFLSLQSNQLNEVVKTLTIASIILMSAALIAGVYGMNFEFMPELSWPWGYPFALGLMAAISLLLIAIFKRRGWL
>NC_009767.1|WP_012121547.1|3973704_3976053_+|hypothetical-protein
MTHDSHSIYTDADFIKDDLRRCDLVMKGGITSGVVYPPAIIELATRYRFVNIGGASAGAIAAAAAAAAEYGRAVPYAGHRSGFQRLDRLRAWLGEGEGNLAGLFQPFSRMKPLFHALFDLVIASRAAPPKRPSASGRSPSVFRLPVAAIRFVWRALSFFVRITRLLARHHPSITLGIGVAIALIGAAIWILPPFLSDSPVQPLVVIVGAVLAILSGLIVGTLAGATHLAWIAVTELPRHLFGLCSGHTDGATPEGWPPTLGDARGGGKPPALTDWLHAVINGLAGRDADQPPLTFGELANTPDGRTISLRMMTSDLSEHMPYVIPKDLGRFLFDPTEFARLFPKVVVEHMRARSIAAAYQVLDERGAVRMLLPLPAWRDLPVVVGARMSLSFPLLIAAVPLYTISVAGQREASAGRTLRVEHLQRHIFSDGGIASNFPIHFFDRWLPTHPTFGINLVQLPTDEADNERFLQALLTNNSAESSDETLKPEIIVKQAYLGRADFRAAAPEPPPARAATPFSDPQGEVYLPPAGPGEDYVEWQTIDTLPAFFRSIFGTAQSYRDTAQARLPGYNERVVRVRLRPEEGGLNLRMSPRIIAKIERKGRLAGRALLPQEPETAGRRRGGFRFDDHRWVRLVTLLSEIDQQLRDMRTAYDDVQAEYPTFLRHALTNDHLPVCPPYYAGSAEERALLARRIEALIALYTLWSDLDEDTTARLNTILLRMNKRTLQNLAQLLEQPDDQEALNSLHDWLGALHAEKVRVAKVAEREASPVEDMMDLRVMPTV
>NC_009767.1|WP_012121546.1|3972220_3973054_-|AmmeMemoRadiSam-system-protein-B
MDIRPSPIAGSWYPSNPARLRRAIEQYLAQATPPGLSGRIWGLLAPHAGLRYSGPVAAWAFACIRGSTPDIIVIVSPWHRGGDTPLITTGHAAYETPLGVVEVDADAIVQLDAALCAHAGYGLARRRYDDEHAIEIELPFLQCVLGSFRLLPVMMADQRTTTAAALGAALAETVRGRDVLLIASSDLSHYEPASVAHRLDAELLRRVAAFDPDAVIAAEYEGAGYACGSGAIAAVLWACRDLGADQVTIVRYGTSGDVEPDAPWVVGYGAAAIWQVA
>NC_009767.1|WP_041330925.1|3971623_3972205_+|ribosome-associated-translation-inhibitor-RaiA
MNLIVNSRNGKLSDRQRQHIEQKLSRLDRYLDRIDKVTVEHMEEMRRNEGNVHRVQVTVVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGRLRRQGGQIVEALPEMNAAAPAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQDADTGKLNVLYRRQDGNYGLIVPEVTD
>NC_009767.1|WP_012121544.1|3970411_3971233_+|SDR-family-NAD(P)-dependent-oxidoreductase
MARRMQLANRTAVVTGAASGIGRAIALSLARRCCHLALADIDEAGMAHTAALIAPHHVRVSCHCLDVSDAIAVAALPEAVRCAHGGVDLLFNNAGVAMWGNFDQVSDADFEWLFAINFHGLVHMTRAFLPLLKASDDARLVNISSVFGLVAPSGQAAYAASKFAVRGFSEALRHELEHTSVGVTVVFPGGVATAISERARQPAAMSRAEVEQGLARSRRLLTLPPEVAGETIVRSVEQRKARVLIGRDARLIDLLVRLAPVSYWSIMRRVMGR
>NC_009767.1|WP_012121543.1|3968909_3970412_+|NAD(P)/FAD-dependent-oxidoreductase
MSIQSSPHTDVLIVGAGLSGICAAYYVQTRCPTRSYAILESRDTMGGTWDLFRYPGVRSDSDMHTLGYSFRPWRGLKSMADGPSILRYIEETAQEYGIDHRIRFGYRVQRAAWSSAEARWSVDAIRMSDGAPARFTCSFLFMCTGYYDYAQGYTPDWPDLDLFRGLVIHPQRWPTDLDYAGKRIIVIGSGATAVTLAPALAERAAHVTILQRSPTYVVALPAEDPVMRRFYQKLPPRIAYRLSRWWSIGVGMYFYTLARRLPDATRRNILTQIRAHLGPDFDVETHFNPHYNPWDQRLCVAPDGDLFRAIKSGRIAMVTDQIERFTETGIRLASGTELNADIIVTATGLVLKPMGGAQIVVDGIPVDPGKTLTYRGAMFSDVPNLALAFGYTNASWTLKCELIAQYVCRLLNYMEKHGYARCTPRRPNTLLSIQPAVTLTSGYIQRALDVIPRQGERDPWKAHQNYLRDLLSLRFGRLNDGSMEFARLGQLQAHAVRGVR
>NC_009767.1|WP_012121554.1|3983274_3985125_-|PAS-domain-containing-protein
MNVTLTPYNSLLIVLSFIAIAIAGYALKKRAMPGALPLSLLACAMFVWLVSYAMELSSQTLSVALWWVRLEFAGIVAVPVAWLWFAVEYTGAWSGINRRRVWLLGIVPLITMIVILTNEYHRQFWQSVVLITDGPFTVFDSRHGFWFWVHTAYSYLCLLCGTGLIVRFIRRTPGLFRGQIGAMLIAVAAPWIGNIIYLAGLSPWGKLDLTPFALTVSLIAIAWSVFSFRLLEIRPIARDMVLQSMSDGVIAVDEQGRIIEVNRAAQTMIGLPASQIIGKHAREVIVQWPEVVARYRDMVEVAEEIEVKVGAERRWFNVQISPIYDARRAYRGRLFVWRDVTGERLIREELRRNNERLLEAQQALTSALRAAEEGNRVKSVFLAHMSHEIRTPLTAIMGYCQLLEAGIERQNLAQTRADLEAIRVASGHLLSLANNVLEMAWIEAGRSEVHDIAFEVMDVVLDVIATVQPLIRRNRNHLRVEGAEHAGVVQGDPAKVRQILLNLVSNAAKFTTGGEVAVRVAHIGDALQPRIQFQVSDTGSGIAPDRIERLFMPFAIAEEHVGRDQRGVGLGLAISRYYCRLMGGDLSIESALGRGTTVTFWIPARVPQGALARVKC
>NC_009767.1|WP_012121555.1|3985240_3985615_-|response-regulator
MRLLIAEDDAMNRDMIARRMRWEGFAITLANDGAEALHLARTEMPDLILLDMGLPKQNGWEVARQLKSDDATRHIPIIALTAYVLPEDRIKGLASGCDAYELKPIDFERLIQRIHDLTSDPAAP
>NC_009767.1|WP_012121556.1|3985772_3986651_+|protein-tyrosine-phosphatase
MYEPLILIVGAADTGRAPLAAALLRRHLMNHSIPARVESAGVLGHDDDPASPDALTVAEHMALDLSAHRARSLSDHLVEEAILLLAIDSGAARVARLRFPQAAARIHTLGELAGRNRDIPDPFKMQIGPWLVYAREIDQMLQQALPRILAFLPEPSAPFAEPGTENREPTRVTTLLSGRSAPLVAEERRAAAERTAHLLDLMTRIPGIVAWNAAREQIEAAIALAQAHPADATDQITAYCALLRAALTLTPSDPGAAHLAALRDAIVRLEQPVGTNDVSDLSARLGGWTSLN
>NC_009767.1|WP_012121557.1|3986947_3987628_+|succinate-dehydrogenase-cytochrome-b-subunit
MAATLTLYRTTIGKKAVMAITGFIGYGFVILHMIGNLKIFEGAEGFNEYAHFLRTVGYPMIPERGLLWVLRIVLLASVILHVVAAIQLTRLDWASRPKGYRETRRKQATFASLTLRWGGLAIFLFIVYHLAHFTFGLGIPNFGGHETAYQNVVAGFSNPINVVLYIAAVGALGMHLYHGVWSMFQTLGLNGPRTDGFWRGLATLSGILLFLGFSTVPIAVITGLVR
>NC_009767.1|WP_012121558.1|3987693_3989664_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit
MTTTDTRPITTRPATEYLDPKLQSKIPEGPIERKWERHKFEMKLVSPTNRRRYTIIVVGSGLAGASAAATLGEAGYNVKCYTYHDSPRRAHSIAAQGGINAAKNYRNDGDSVFRLFYDTVKGGDFRAREANVYRLAEVSMAIIDQCVAQGVPFAREYSGYLDNRSFGGAQVARTFYARGQTGQQLLLGAYQALSRQIGLGQVKMFSRTEMLDLVVVDGRARGIVTRDMVTGKIESHFADAVVLATGGYSNVFYLSTNAKACNTTAIWRAHRRGAFFGNPCFTQIHPTCIPVSGDHQSKLTLMSESLRNDGRVWVPKTPGDKRPPSSIPEDERDYYLERRYPSYGNLAPRDIASRAAKQVCDEGRGVGPGGLGVYLDFSDAIKRLGKRVIEERYGNLFEMYERITGENPYETPMRIYPAVHYTMGGLWVDYNLMSTIPGLFVIGEANFSDHGANRLGASALMQGLADGYFILPYTIADYLASTKLPKVDTSHIAFRETEAEVADRIKRLLNTNGTRTVDMFHRELGKIMWDYCGMARNEAGLKHALERIPELRERFWREVKVPGEGNDINQELEKAGRVADFMELAELMCIDALHRDESCGGHFREEHQTEDGEAERDDENFSYVAAWEFTGLGTKPVLHKEPLIFEYVKPAVRSYK
>NC_009767.1|WP_012121559.1|3989757_3990507_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit
MNLTLHVWRQKNAQSEGRFVTYQAKNIIPDMSFLEMLDVVNQELIMKGEEPIAFEHDCREGICGSCGMVINGYPHGGHRGTTACQLHMRHFKDGDTITIEPWRARAFPVMKDLIVDRSAFDRIIQAGGFISANTGVAQDANAILVPKQNADAAMDAAACIGCGACVAACPNASAMLFTAAKIAHLGLLPQGQPERYTRVVRMVEQMDKEGFGGCTNIGECAAACPKVIPLDVIARMNRDLLVAKIKGVG
>NC_009767.1|WP_041330933.1|3990828_3991029_-|hypothetical-protein
MTRRGARNDTHAASSIVIGIISRQDARAPFPAVTVGIDALFIVHLEGIASLLAQMQRLMIPQRGSL
>NC_009767.1|WP_012121560.1|3991573_3994024_+|hypothetical-protein
MAHRSRTDALARLFAACDTLADGFGALPDDERRPAAALTLARLMFLSFLRVGGWLDAHDALHRLEYADCPGDAILASMPSGIVAVCRRIDPESATLRRALSLIRDMPASLDDNAPGCLTPAAMGLIVERYVDRKRSGVYYTADDVTGYIASRTIIPRLIDALAPESLRLATDLIQRDPLRYLPDALRHGREHALPDAITGGVADVAQRHAWDVAAPADYALPGETWRDVIARWRRVGETLAALRAGTVALADLITHNLDLIRLICDLCVVWSPARLDELDAALGRLTVLDPTSGSGAFLCAAFDLLADLAFLVTQRRTEDHSARKDGFWEQLPASPRLFWASERPTSISPALPEYGANKHVGARNTSRDPESAISARRNSVAPLAERLRAIIEHNLYGVDIIPEAVEICRMRLWLRLAGRIERREYLHDLRFNIHAGDALTGSLDQFDDAGEQISGNRPQPLRWRATFPNIMAAGGFDVVIGNPPYVARSGLKDDPVLRCYRTATTGNLYALVIERALNLLRPGGWLGVIVPVASVATDGMAPLQRLYAPLRQWHSHYAVRPGKLFPDVDMNLTITLLHKAAADGERYVSGYRRFRSCERAHLFDTLGYTRLPAADTINGALPKLGSALEVRLLERMLAHGRRLRDYVASDGVAIYYHSGGRYWRKALPKKLSSHYKPLRVTPAIAPIALALLNSQLFYWYWIAFSNCMDVIAREVFEFPVFRLEDADPAPFAHAVDRLIALYHEGATTRARRGARIQTSETNIDAARARAVIDTIDHLLAQHYGFDDEELDFVLSYDLKYRLGTNRARHCRPLAR
>NC_009767.1|WP_012121561.1|3993999_3995307_-|nucleotide-sugar-dehydrogenase
MTKLSSRDRLLRRIADRSARIGIVGVGYVGLPLAAVFGAAGLRVTGVDASAERVAAINAGRSYIDDVPTDVVAQLRADGLLDATTDFDVLAELDAISICVPTPLRKTRDPDISAIMAVTEQIAQRLRPGQVIVLESTTYPGTTREVILPRLEASGLTVGTDYFLAFSPERVDPGRADWTTRNTPKVMGGVTPACLEVARALYETAIERVVPVSSPEVAEMVKLLENTFRAVNIGLVNEVLLMCDKLGLDVWEVIDAAATKPFGFMKFTPGPGLGGHCIPIDPLYLSWKLKTLNYTARFIDLASEVNTEMPRYWVQKVQDALNDAGRAVKGSRVLVLGVAYKRDVDDVRESPALDIMHLLYEKGAQVTYHDPHVPEVQIEGVRLRCEPDLDAALRAADCVIIVTDHSAYDWQRIARQAWRVVDTRGALRHLASGRQ
>NC_009767.1|WP_012121562.1|3995303_3996248_-|SDR-family-oxidoreductase
MAHVLVTGGAGFIGSHLVEALLRRGDQVRVFDNFSTGRYDNLAHIRDDIEIIEGDLRDEDAVRRAVAGVEVIFHQGALASVQRSVDDPITTNAVNVTGTLHVLTAARDAGAHRVVFASSSSVYGDTPTLPKVETQAPHPLSPYAVSKLAGEQYCMAFSSVYGLPAIALRYFNVFGPRQDPHSEYAAVIPRFIDRMVRGVPPIIYGDGLQSRDFTYIENVVDANLAAADAPADCSAVFNVGAGARTSLLELAAQINHLLGSNLAPDHQPPRPGDVRHSQASIDAIRETLGYAPRISLTEGLARTLAWFRHEGARS

Crispr_ID: NC_009767_78

• CRISPR_ID: NC_009767_78
• CRISPR_location: 4059934-4060039
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_78

Consensus_repeat	Method
GAGGTCAGGGGTTCGAGCCCCCTC	CRISPRCasFinder

spacers of NC_009767_78

>78.1|4059958|58|NC_009767|CRISPRCasFinder
ACCTCCACCAAAGCACGGGGCAGTAGCTCAGTTGGGAGAGCGCAACGCTGGCAGTGTT

CRISPR arrays and Neighbor proteins around NC_009767_78

CRISPR arrays

The CRISPR arrays of NC_009767_78

>merge|NC_009767|78|4059934-4060039|CRISPRCasFinder
GAGGTCAGGGGTTCGAGCCCCCTCACCTCCACCAAAGCACGGGGCAGTAGCTCAGTTGGGAGAGCGCAACGCTGGCAGTGTTGAGGTCAGGGGTTCGATCCCCCTC

>NC_009767|78|69|4059934-4060039|CRISPRCasFinder
GAGGTCAGGGGTTCGAGCCCCCTC	ACCTCCACCAAAGCACGGGGCAGTAGCTCAGTTGGGAGAGCGCAACGCTGGCAGTGTT
GAGGTCAGGGGTTCGATCCCCCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_157042672.1|4044112_4045480_-|CRTAC1-family-protein	unknown	unknown	gnl|CDD|369440
NC_009767.1|WP_012121614.1|4065427_4068187_-|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|236645
NC_009767.1|WP_012121602.1|4045515_4046361_-|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|224561
NC_009767.1|WP_012121616.1|4069068_4069779_+|glycosyltransferase	unknown	unknown	gnl|CDD|133016
NC_009767.1|WP_012121619.1|4071970_4072693_+|PHP-domain-containing-protein	unknown	unknown	gnl|CDD|213987
NC_009767.1|WP_157042673.1|4073035_4074361_+|RNA-methyltransferase	unknown	unknown	gnl|CDD|223640
NC_009767.1|WP_157042856.1|4057935_4059558_-|CSLREA-domain-containing-protein	unknown	unknown	gnl|CDD|211937
NC_009767.1|WP_012121618.1|4070828_4071974_+|glycosyltransferase-family-1-protein	unknown	unknown	gnl|CDD|340842
NC_009767.1|WP_012121611.1|4060133_4061123_+|zinc-binding-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|176217
NC_009767.1|WP_012121605.1|4051826_4053581_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NC_009767.1|WP_012121612.1|4061268_4061871_-|response-regulator	unknown	unknown	gnl|CDD|381147
NC_009767.1|WP_012121608.1|4056133_4056667_-|PspC-domain-containing-protein	unknown	unknown	gnl|CDD|377200
NC_009767.1|WP_012121607.1|4054932_4056126_+|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NC_009767.1|WP_012121613.1|4061867_4065431_-|response-regulator	unknown	unknown	gnl|CDD|274362
NC_009767.1|WP_012121609.1|4056763_4057867_-|rod-shape-determining-protein-RodA	unknown	unknown	gnl|CDD|274033
NC_009767.1|WP_012121606.1|4054028_4054835_+|DUF5317-domain-containing-protein	unknown	unknown	gnl|CDD|379952
NC_009767.1|WP_012121615.1|4068587_4068971_+|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl|CDD|376605
NC_009767.1|WP_012121617.1|4069775_4070480_+|TVP38/TMEM64-family-protein	unknown	unknown	gnl|CDD|223475
NC_009767.1|WP_012121603.1|4046547_4049754_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|225461
NC_009767.1|WP_012121604.1|4050051_4051830_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_157042672.1|4044112_4045480_-|CRTAC1-family-protein	gnl|CDD|369440	pfam07593, UnbV_ASPIC, ASPIC and UnbV. This conserved sequence is found associated with pfam00515 in several paralogous proteins in Rhodopirellula baltica. It is also found associated with pfam01839 in several eukaryotic integrin-like proteins (e.g. human ASPIC) and in several other bacterial proteins.	2.61647e-21
NC_009767.1|WP_012121614.1|4065427_4068187_-|EAL-domain-containing-protein	gnl|CDD|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	2.47005e-113
NC_009767.1|WP_012121602.1|4045515_4046361_-|alpha/beta-fold-hydrolase	gnl|CDD|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	5.33519e-48
NC_009767.1|WP_012121616.1|4069068_4069779_+|glycosyltransferase	gnl|CDD|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	2.00543e-28
NC_009767.1|WP_012121619.1|4071970_4072693_+|PHP-domain-containing-protein	gnl|CDD|213987	cd07432, PHP_HisPPase, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to produce histidinol. HisPPase can be classified into two types: the bifunctional HisPPase found in proteobacteria that belongs to the DDDD superfamily and the monofunctional Bacillus subtilis type that is a member of the PHP family. The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	2.37227e-33
NC_009767.1|WP_157042673.1|4073035_4074361_+|RNA-methyltransferase	gnl|CDD|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	2.01982e-48
NC_009767.1|WP_157042856.1|4057935_4059558_-|CSLREA-domain-containing-protein	gnl|CDD|211937	TIGR04214, conserved_hypothetical_protein, CSLREA domain. This model describes an N-terminal region, with a motif CSLREA, shared by tandem genes in Acinetobacter that both have the GlyGly-CTERM putative protein-sorting domain. Many proteins with this domain are putative outer membrane proteins (OMPs) with predicted beta strand-forming repeats.	4.96467e-06
NC_009767.1|WP_012121618.1|4070828_4071974_+|glycosyltransferase-family-1-protein	gnl|CDD|340842	cd03814, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases and includes a sequence annotated as alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase from Bacillus halodurans. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.	3.78865e-127
NC_009767.1|WP_012121611.1|4060133_4061123_+|zinc-binding-alcohol-dehydrogenase	gnl|CDD|176217	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	1.97813e-58
NC_009767.1|WP_012121605.1|4051826_4053581_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.4147e-133
NC_009767.1|WP_012121612.1|4061268_4061871_-|response-regulator	gnl|CDD|381147	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains. Pseudomonas aeruginosa cyclic di-GMP phosphodiesterase PA4781 contains an N-terminal REC domain and a C-terminal catalytic HD-GYP domain, characteristics of RpfG family response regulators. PA4781 is involved in cyclic di-3',5'-GMP (c-di-GMP) hydrolysis/degradation in a two-step reaction via the linear intermediate pGpG to produce GMP. Its unphosphorylated REC domain prevents accessibility of c-di-GMP to the active site. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	7.07065e-58
NC_009767.1|WP_012121608.1|4056133_4056667_-|PspC-domain-containing-protein	gnl|CDD|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	8.52154e-25
NC_009767.1|WP_012121607.1|4054932_4056126_+|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.69796e-46
NC_009767.1|WP_012121613.1|4061867_4065431_-|response-regulator	gnl|CDD|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	4.80562e-82
NC_009767.1|WP_012121609.1|4056763_4057867_-|rod-shape-determining-protein-RodA	gnl|CDD|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	1.29926e-126
NC_009767.1|WP_012121606.1|4054028_4054835_+|DUF5317-domain-containing-protein	gnl|CDD|379952	pfam17248, DUF5317, Family of unknown function (DUF5317). This is a family of unknown function found mainly in Bacteria. Members of this family have multiple trans-membrane domains with the majority typically constituted of 4 trans-membrane regions.	6.96619e-15
NC_009767.1|WP_012121615.1|4068587_4068971_+|large-conductance-mechanosensitive-channel-protein-MscL	gnl|CDD|376605	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL.	3.31772e-44
NC_009767.1|WP_012121617.1|4069775_4070480_+|TVP38/TMEM64-family-protein	gnl|CDD|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	8.27056e-29
NC_009767.1|WP_012121603.1|4046547_4049754_+|tetratricopeptide-repeat-protein	gnl|CDD|225461	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription].	2.00942e-40
NC_009767.1|WP_012121604.1|4050051_4051830_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	7.28643e-170

Protein sequences

>NC_009767.1|WP_157042856.1|4057935_4059558_-|CSLREA-domain-containing-protein
MRCSVVLLTLVMIAALLTVEPATAAPQTFTVTKTADTADGVCGVDCSLREAISAANANPGADTIILPAGTYPLTLTTTLEDNNADGDLDIRDDLTLIGAGAATTTVIAVSGDRVVHLLASATVTITGVTLRGNGDVPGSGGVILVEPGTSLILRDSVVRDGRAGRGGGIEVLGNGVNPAGANATIERVTFTGNRAASLGGALSVFNGGDVSLTNVTITGNSAGNSGGGISVSLDQALINPPKSAATLNNVTIVRNTADDDRNDIGEGGGVSVRVDAQVINQVRLRNTIISDNADLSPTPARVNPDCFNILESLGYNLIHRDTGCTIVGALSGNIIGVSAQPGVLLNNGGSTPTVALQSGSPAIDAGDPAVGSSCAATDQRGVARPIDGNGNGLAICDMGAYEAPVPGDADLSVILTAQPNPVEPGGVLTYSIIVLNAGPGAAESVQVQFTPPAGATSLQIDGIGWDCIVAGVVTCGRGALAASGVASALTIGLRVPSPGGVSTATATVSSAQRDPAPVNNTATLSVFRGRPYLWLPLIKR
>NC_009767.1|WP_012121609.1|4056763_4057867_-|rod-shape-determining-protein-RodA
MVRTWRDYNFPLFLCVVILLIFGAAMVYSATLRDPLTQGYFSRHLVNLLVGCAAMAVMTAIDYHFFESWIVPFYLGAVALLGLVLAIGQVSSGAQSWIDLGVRTFQPSEPVKLLVILALAAYWSRNERQPSAWRVVITSLILVGIPTVLVFLQPDFGTAMVFGAIWLAMALAAGVRWQQFVVLFVAALPAAMYGWTHILRPYQRDRLLIFIDPLKYDPELKQGAWNIMQSLTAIGSGGLTGRGWTHGLLSQGNYLPVQYSDFIFAITGEELGFIGATLLLVFLGVTVWQALTVAQAARDSFGRLIATGIAAMLLCHVLVNVGMNMSIMPITGIPLPFISYGGSFTLTTLAAVGLLQSIALRRRRITF
>NC_009767.1|WP_012121608.1|4056133_4056667_-|PspC-domain-containing-protein
MQSRLVRSRRDAVLAGVCGGLGDYFQIDPVIVRLIFVLVTLTSGIGFLLYPILWIIMPKAPPDTPSAFPGEGQQAGEQGAVFSRQAYQAQYSRQSGYAESSFADAASGPPQTGQTINLRMDPAMPPARAPRRRLNWAGIVLIGLGLIFLAEQFGIDTDIVFPLLMIVAGGMLIFRHR
>NC_009767.1|WP_012121607.1|4054932_4056126_+|HAMP-domain-containing-histidine-kinase
MNSGVTTQSLSPADILTILRQIVDSPTVESLAEILHDVIMRLFPDTRVDLFVLSESAEHLLMTCGNQDLPTPPARCGLSPFIAWLHQHGYQTALVPLMAANQLQGRMIVSQRAIGPTQRDLTIFDQIAPFVGLWFIAHRHLTTIKQHEEHLRTTQERLHQLEEMRLRATLAAGAAHDIGNLFASVLGHAQLLQQAAPSHLQDDLKTIEQAARDGHYLLRRLLTIRSATHSVEATTSPVLLPTLVHDALQLTRPFWGTRRSVKVNMALAPVPPVRGHPADLREVLINLILNGVSAMPEGGTLTVRTYSTGERAVVEISDTGAGIAPAQQNAIFQPFVTNRSTGSGLGLSISRTIVESYGGVISVASTPGRGATFTISLPLAHTADTAPEPTAVRFAAS
>NC_009767.1|WP_012121606.1|4054028_4054835_+|DUF5317-domain-containing-protein
MTLFVVYLACALVGAVIALWRAPSWPRYNLLLAIAAVPQIAHILGIHISEMFVLSVVAMILWCVCNYRIAGVPVVAGGAALNMLAMAWHGGAMPVRADILADLGYHFEAGVLLEGSKDIVVHGSPLWILSDWLPISTTLLTLIISPGDILIASGVLIWLLFSRTPNPDSERKHPMLAFRTPAAPSEQHLHLVPGHSARPALTRLALLAAADPALAERLLHDPFDAADAHPHYHVSLDARDRATLAAIRARARTVGEFLGELAAEVDGI
>NC_009767.1|WP_012121605.1|4051826_4053581_-|ABC-transporter-ATP-binding-protein
MKHSGLRFLLPYMAPYRRHLIVGTIYALISASASAFSPALLGRAIDDVLAGIRTDRLVWYAVGLIALATTLAVFRYLLRMLTGWIAVGVSYRMSQDLFDRVLLFDQATAQSYGVGDLLSRASNDFIYIWRFYSAGFQMSMHALFLLAIGTVLMALSSPLLAALVVALLFASLGVQVGLGRVLERAFDHVQQRMARLSAFAQEHLSAMRMLAAYAQERSVVAAFQQSNEAYVRSNLDFVLRSAAIAPLPSLVVRLAAAVVLGLGGALVVGGAISVGQYVQFIVYLGLLSAAAQQLSQAYERLQQGSAAAGRIGEVLRRRSRIVDAPDAIALMPSGDICFEGVGVRATGDSRWIVRGIDLRIAAGTTLGIVGATGAGKSTLLSLIGRVRDPDEGRITIGGVDIRRIRLETLRRSVVYVPQEPLLFSISVRDNIALGLTGVPDELVHRAAHAARLTNDLAQLPQGLATIVGERGATLSGGQKQRTAIARALVRDPSILLLDDTLSSVDAQTAAEILRELAAAREGRTVVMVSQRMAAVRDADQIIVLHEGGIVEQGDHQSLLALNGRYAAMYRRELRQAEESEESIA
>NC_009767.1|WP_012121604.1|4050051_4051830_-|ABC-transporter-ATP-binding-protein
MTGESSSTRSTTVRGQDAALVVLLASVMAPHWRILALALLILLATAALNAVPPALMQQAIDGPIARGDPEGLWLIAALYGGVAIVMFALQYIYTLFLQMAGQRALADLRTRLFDHMTHQDQRFFGRTPTGDLVTRLTSDVDTINALLSSSVVTILVESVTLLVIVGVMLAVNWRLALLSLAVLPLLALVTRFFRQRIRRSSTGERTALARASAFLSERIVGLTVIQLFGAQRASAEEFDGYNMAYRRALLALRRQSALFLASQEILSSVGLALVLYGGGQGVLAGWATLGTLVAFVQYTERAFQPILRLGEQYNTVQIALGAAERIYTMLRTTPAVVSPPDPVVLPRVRGAIELRHVSFSYVPEEPVLRDVSLSIPAGQNVAIVGATGAGKSSLVALLARFYDPQQGQVLLDGVDIRRLDLTMLRRAIAVVPQDPVCLAGSIAHNIRLFRTDISDADVRRAAELANAAPFIERLPGGYEFEVLPGGANLSVGQRQLLALARALALSPEGVLALDEATSSIDNATERLIQEALERILRTRTSVVIAHRLSTIRNADRIIVMHRGRIVEDGDHDALLARGGFYARLHRHQFVMH
>NC_009767.1|WP_012121603.1|4046547_4049754_+|tetratricopeptide-repeat-protein
MALRFQQKLIVPTSARPLIERPHVIAQLERAIRSKRVVALAAPAGWGKTTALAQWVAHTTMPTAWYTLDSADRDPQVFLDYLLHSVADLAPGTADIAARLATATPQSLAEISQQTALALADAPDHFALILDDVHVLEDDQSQSIPGVSLVFALLASIAEYAARCHLVLASRTLPALHGMVRMVAQQRAAVFDYSVLQFQRADTQRLAGMTAGLTLSDDAAEQLTAAVGGWVTGIVLSLDQPSVNGSSVPKQHIVDYRLAEIATQRDAIIEANTSQVYAYFAEQILSPLPADLQRFLEDTSVLQDLSPHRCDRLRNTTNSAEYLDDIKRRGLFVSSRAGWVSYHSLFREYLRSRLARDPQRYRSLLRTAGDLYATEDDIERALDCYLAASDYRQALELLRSAVPRLRQRSRQTTLLACFERLHRFRLTGDRHIRDAMPFPAVQDPRLPATPPDLLLAEARVYSDLALWERAYLALQLAEASGNAQIRAEARILSAEVQVLQGDYARAQQTLRTVDVEILDDRLRLEYAIAAGRAHIMAGEVAAAITALERAHTLATTRADAVDHPGPLADIYDNLGWAYAAQGDRQSALRHLKRADACWQASGNHGRRALTLNNMGVMAMEEGRYAEARAAFDTGLDIARHTGLRREESVLLCSLAELMLRQGDVEQSIHCAAEAHALATAFDIASSAEAAAATALWSALLVGDRAATSAWSDRTAAIVAPFQPEVRGRLALARAMLAMQQSNPDPERLANFLAEATVCEAALSNEERAYVALLRADIAYSRAGWQCAAAEWADFVARASTLSEPLLHRFAAVHRKLFEIAAPHTPLAARAIAGFRQPASIRWRITALGGFECLVDGMPVELSQLHRALLIRLLDAGPPGLAVERLWEAVWGDDHVSMPALHQALRRLRLQTGLSVSAREGAVAIRSGWDMIEYDVQELERLLEMPTHPNIIQRVMALYRGEFLPGAPLSASLWVESRRAHLQQRYLDAIEQFAQSIERDSPQQAMFYYQHVLQIDGCREHTAAQLMRLAARFGNRTLVTVTFEHLKGALRALGASPEPATAALYQQLT
>NC_009767.1|WP_012121602.1|4045515_4046361_-|alpha/beta-fold-hydrolase
MPTESIQFAARATESPSVGRRRVESLTVWAGSPGVLLIHGFGGDLAEVRPLAAAFIREGYSVHAPLLPGHGALPDALAGVRWQQWAETVVQGFALLHQHCSEVAVVGFSMGSLLALLLAAHLPVARLVALAPALTLRGQFLVNLSSIARYAISWYYPLARADFKDPALRALIRNRVPDADLDDPVVCEQLRRTVRMPLTAIHQLTLLQRSARRALPRITAPTLVVQGRDDATVDPRSAGQVARHIGAADCRLIWMDGYGHQLLLGEGGERVAHMIVAWLKG
>NC_009767.1|WP_157042672.1|4044112_4045480_-|CRTAC1-family-protein
MPMFIDCSHLIASNPPRLHYGVAVVDINDDGAWELFIAGFDGANRVLRWNGAGFVDIVDQTLADAQRQAIGVAAGDLDGDGREEIYVLNTDTFAGRKRFGDRLFDFQETGWVDLFELPQNREALNLTAGRSVAVVDRLGTGRYGFFVANYGGPFRLYELDRFGEVQDMASAAGVSFTTGGRGVMTLPLVTSRMDIFTVNENGPNLLFANRGDGTFEEIARRAGLPDPHEHGRGVAAGDFDGDGRFDIVYGNWEGPHRLFLQKWEGLFVDAAPPDMAEPSRVRTVIAADFDNDGELEIFFNNIGEPNRLFARRGDVWTKIDPGDALEPAGLGTGAAVGDFDGDGRLELLISHGEADLQPLSLYRPVSNEYAWLRVLPLTRAGAPARGAVVVLSAGGRRQLRAVDAGSGYLCQMEAVAHFGLGRVATVESVEVYWPDGAMTSITAPEVNRVLRIPHP
>NC_009767.1|WP_012121611.1|4060133_4061123_+|zinc-binding-alcohol-dehydrogenase
MRAHAIVFVAPNQVQCGAIDVPEPAPGELLIEAIYTCISPGTELRTLAGLQAETPGWPLIPGYAMVGRVVGAGPATPYTAGAIVFCKGTRYAGAHLMWGAHLSHAVLPAEQAIPLPDGIDLLEATTAKLAAIAYRGLTIAHPLPHETVAVIGLGIIGQLAARLHALNGARVLATDRTPQRVALAQRHGIEAFVAEDNLAAAFRQRLNSGVDIIVDATGAPSVITEAIELARDVPWGDDPGGNARYLVQGSYADSFSVPYQAAFRKELAILMTRDEGPRDLHTVLNLMQRNRLKTRDLIGAVVPPERAPEIYRTLREQSDMVTAVFRWSA
>NC_009767.1|WP_012121612.1|4061268_4061871_-|response-regulator
MSQSPDTILVVDDTPANLALLFTGLRRAGYKVLINERGDVALQTAINVQPDLIVLDVMMPGMDGFETCRRLKADPRTKDIPVILMTALTDAIEEVTGLRAGAVDYITKPINVDVVLARINTHLTLRKLYRNLEQKHAALEAALATIKTLSGIIPICAWCGSQIRDEQGNWVSVTTYLETHAEVSFSHTICPTCYERVMHE
>NC_009767.1|WP_012121613.1|4061867_4065431_-|response-regulator
MIADASMSDGTLHATRPTIGLLTAIVNQPFWLGVVDAARRHGVNLICFLSGTLPVRSQALLRVPYLQVLPALSFFALANSERLDGLITWGGSRSGFGINLDDAEMEEFIAPFRRLPMVNYEGLIQGVPSVVTDTRQGMRTLLEHLIERHQRCRIAFIRGPQRHMESEERFAAYQETLRAFGIPFDSALVYHDLRWGKIVGIEAARELISKRRLRPGADFDALVGSEIEYALGALHTLQESGVRVPDEVAVVGFNDHLDAQTLDLPITVVAKPFYESGVVAVGALLDRIAGKSIPDRIHVPARLIVRRSCGCWSPDRSAPVLSGDLVEARGDRLVAQIGRLRDTIDADIDRSWINVLIEGLLPGMPDRHDQERDQFWSAFERELSRRRTRQELAQWHDVISELFYLIVSALDHADDMPRANLLFLQRIRLALAQERERSRIELRTRTIEQSHTLLEISQSMLIAQDLKYLLEVLAQRLPELPVRDGYLVLYDDFPPTTNLEAPVWGRVVLALHEGRRLPLPPDGISFPSRRIVPDALLCEHQPYAFIVTPLFFGLRDFGFIAVQVGPREGGVYHMLAQEISSALQSVFLWRDYRRSEYARRESEARLHTIVEHMPVALWAKDLNGRYIMQNSVMRTLTGDNSWKDEDSGGAALAEWAPYEAWAREGRTVSFEHALLVQDQPRLFKHIIAPVQVDGTVTAILGLMFDITEQRTLEDSLRSAKESAEEARRAAEAANRAKSVFLSNISHELRTPLNSILGYAQILEHDPTTSDYARKSLRVIQSSGEQLLNLIDDLLDLAKIEAGKIEVRPDRFALDAMLATICDMMQERAVARNLAFAREIANLPRLVVGDEKRLWQVLVNLLSNAIKFTREGVVTLKVERLPDNRDKVRFEVIDTGIGIAPEYREVIFRPFEQLGAQTGEKGTGLGLAIARELVTLMGGTLRVQSAPGAGSRFWFAIPLPEAPAEPLLPKRASRRVIGVAGPAPKVLIVDDHPDNCAILRDMLQPLGIITAEAQDGYDGLERMAVFNPDAIVLDLVMPRLNGIDMIRRIRASAAGDRIVLIVSSASAYPDDRIQSLNAGAQAFIPKPIDRTILLETLQRHLPWVEWRYAEPSVDQSHWAAPVLLPRTMLDSLEELARIGDIDAIQQRVDALIQEMPQAASFVAQVRYFLEHFQIGQLQEFLKKSRAEG
>NC_009767.1|WP_012121614.1|4065427_4068187_-|EAL-domain-containing-protein
MPSPGHILVVDDHDYIRNALARQLERAGHTVVLRSDGIQALEAVRQQAFDLILLDILMPGMRGDRVLATLKSDPALRHIPVIVISGDQDLDLVAHCIELGAADYLGKPFNATILHARVNACLEQKRLRDTEQAYLRMRLQLLSTAADHPATAHDPTIQQAIRNSAGFEAVDQTLQAMLNRLEEEQRERQRAEEELRALNLMLEQRVAERTMLAEQRAEALKRSEASLRQQTNLLLAVLDSMGDAVVVTDAAGRLILYNSAAVHMLGDRLMSLLPSAPDTQVAQSPDGRSSLTPRDLPFARALRGESVNAAEVHLPAGDAGAEQWLSITARPLRDTEGLSGSVAIVRDVTEAKRAEAALRASEERYALAAQGANDGLWDWDLVNDRIYFASRWKAMLGYGDDEIGTSPDEWFSRVHPDDRERVELRLLAHTRRLIASFELEYRILHRDGAYRWMLCRGIAVWDASGRATRMVGSQTDITDRKRAEERLEYGILHDTLTGLPNRTLFMDRLSLALRRSQRERSLFAVLFLDLDRFKTINDSLGHAAGDELLVVVARRLEGVLRPGDTVARLGGDEFAVMLDRLDAPEDAEWIAERIQQALRAPLTIGGRTVYTTASIGLVLSNQGYERAEEIARDADTAMYQAKMGQRARYVVFDPDMRRKALSHFQLENDLRSAIEHGELCVYYQPIVALTSGRIVAVEALARWQHPQYGLIAPDQFIALAEEVGLINAIGQWVLQEACRQLRVWRTYYPHYADMWVNVNLSAHQLAQPDLVAQVADTIARNDVPARALKLEITENTFITHRDVAAAQLNDLRSLGVGVCIDDFGTGYSSLSYLSQFPVDTLKIDRVFINRLGAAREHREIVKAIITLAHSLGMTVVAEGVETLDQANELRALRCEYAQGWLFGCTAPPEQMEQMLAAHQ
>NC_009767.1|WP_012121615.1|4068587_4068971_+|large-conductance-mechanosensitive-channel-protein-MscL
MFEGFRKFVMRGNVVDLAVGVVIGTAFSAVVNSLVNDVLLAAIATLVGKPDFSGVLVFGAVRIGAFLTAVVNFLLIAAAVYFFVVTPVNKLNDLIRKPEPPAPPEPSTQEKLLIEIRDLLRQNITRS
>NC_009767.1|WP_012121616.1|4069068_4069779_+|glycosyltransferase
MLDTLSVIIPTRNEAPLIGRFLAALPASMELIVVDASNDETPAIIERARPHNTRVIRSPAGVAEARAIGAAAASGDWLIFSDADVHFAPGYFDRFARYTDSDAVYGPKFATAAYRWYSAIFTGGQRMAHALGFPAASGSNMAVRRDVLKAIGGFRCDLPVNEDSELFLRLAYRGYRIRFAADLAVYSLDDRRLRRGAVRKLFHSTARCALIALGLRVPLPQRLLRHDWGYWSTTRR
>NC_009767.1|WP_012121617.1|4069775_4070480_+|TVP38/TMEM64-family-protein
MSPSPDAMHVRRVLFLAGALALTLLLFLIGWRGAAQQVFSAASPEEAAAALRSFGLWTPLVSVLLMVVQSVLAPLPGSFVAAANGAIYGIWWGTLLSWIGGMAGGLATYGLGRLSGNVLEQRWKDTPLWQRLTGVGAARRFWIVLIARMTPIVSLDFIGYLAGVSRMPLPSYTLANAIGILPGMLAYTLIGSELIQGRAISWQIAVALLLIVVLFIIGRRRLRTLNVERANVER
>NC_009767.1|WP_012121618.1|4070828_4071974_+|glycosyltransferase-family-1-protein
MRIALITETFLPNVNGIVTTLCRLLEHVQHEGHEALLFAPQGAPEHYAGAQVIPLRGIPFPLYPDIRFTPPQPGIVPALRQFRPDLIHLAGLMVLGPAARFAAQQLRIPAIATYHTDLPAYSVYYGLGALRLAAYSYLRWIHNACALTLCPSSAILADLRKRGFRRLRLWGRGVDTIRFHPAHRRAEWRDAIGARANECVLLYVGRLAAEKRLDLLAEALRDMEGIRLVLVGDGPARQQIERRFAGMPVTFTGFLNGHDLAVAYASSDLFVFPSDTETFGQVVQEAMASGLPVVAARAGGVIDLVRNEETGVFFAPGSAYSLRTAVNRLVANPGLSRAYGQAGRAAAERRSWTRVLDELMEYYRRALRWRPRLLALRRTWS
>NC_009767.1|WP_012121619.1|4071970_4072693_+|PHP-domain-containing-protein
MTIWSRADIHIHTRYSDGHSSVAQVLEYADHIGLRVIAITDHDTIDGALEAQRMARGFDVEVIIGEEVSTTDGHLLVLFLTHALPPRRPASETIAAAHAQGALCIVAHPFDWLVSSFGTPLLRYCGGDHPIWPVDGVEAFNASLPLPGMNARAASVATTLGLPACGGSDAHHFSTVGLGYTLFPGTTANDLRQAIIHGEVQASGRSWAAGHYAAVAGLRARRGLARAARAVTRPARAMSR
>NC_009767.1|WP_157042673.1|4073035_4074361_+|RNA-methyltransferase
MAVVIENPDAARSALIDLLRREYTVDHDALIADVFGADQAGLCVLASGWGSIEGVLASQPETRCAATTRALVVAAHERALRDLLLAAPRGDVLLFLVVGNWTLPTLAELFDGREVAPYPLLSYPGIHLFVGVRRGSGALPVIDDNTLFRGPPLAHAALPRPAGGQNLSSARDPMVARLRDLGNAAGRRARGQFLAEGPLLAFRALDDLPVEDLFYTGELLRDPAGTVLLRRAADLGVPAHRISEGLMGLITPTRPIPSVITAIWGQLRNVADYRPGRRAVILATEQINNPENLGMTLRTADAAGVEAVIVAGSGADPFHRECVRAARGAVGRIPIYTCADLPTWVGQARARGIHVVGATGNVERTLYDADLPLPLMIIVGNETEGLTDATLAVCSSLVRIPMAPGQDSLNVGVAAGVILYDIVRRRLCDRHLAPTKNPTTA

Crispr_ID: NC_009767_79

• CRISPR_ID: NC_009767_79
• CRISPR_location: 4145264-4145375
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_79

Consensus_repeat	Method
AGTAGTGACGGTCACCTGGGATTGGAGAAAGGAGAGAC	CRISPRCasFinder

spacers of NC_009767_79

>79.1|4145302|36|NC_009767|CRISPRCasFinder
CTCCAATACGCATCGGCAAGGCGCCTGGGGATCGAA

CRISPR arrays and Neighbor proteins around NC_009767_79

CRISPR arrays

The CRISPR arrays of NC_009767_79

>merge|NC_009767|79|4145264-4145375|CRISPRCasFinder
AGTAGTGACGGTCACCTGGGATTGGAGAAAGGAGAGACCTCCAATACGCATCGGCAAGGCGCCTGGGGATCGAAAGTAGTGACGGTCACCTGGGATTGGAGAAAGGAGAGAC

>NC_009767|79|70|4145264-4145375|CRISPRCasFinder
AGTAGTGACGGTCACCTGGGATTGGAGAAAGGAGAGAC	CTCCAATACGCATCGGCAAGGCGCCTGGGGATCGAA
AGTAGTGACGGTCACCTGGGATTGGAGAAAGGAGAGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121658.1|4128954_4130049_+|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|236323
NC_009767.1|WP_157042857.1|4146791_4147655_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|225136
NC_009767.1|WP_012121655.1|4123429_4126345_-|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|143636
NC_009767.1|WP_012121671.1|4151382_4152384_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381313
NC_009767.1|WP_012121672.1|4152861_4154586_+|hypothetical-protein	unknown	unknown	gnl|CDD|223944
NC_009767.1|WP_157042678.1|4147823_4149545_-|murein-biosynthesis-protein-MurJ	unknown	unknown	gnl|CDD|240528
NC_009767.1|WP_041332094.1|4127040_4127424_-|methylglyoxal-synthase	unknown	unknown	gnl|CDD|179969
NC_009767.1|WP_012121659.1|4130455_4131640_-|DUF4938-domain-containing-protein	unknown	unknown	gnl|CDD|292908
NC_009767.1|WP_012121663.1|4140283_4142200_-|hypothetical-protein	unknown	unknown	gnl|CDD|227308
NC_009767.1|WP_012121664.1|4142638_4143679_+|threonine-synthase	unknown	unknown	gnl|CDD|236013
NC_009767.1|WP_041330952.1|4149918_4150191_+|30S-ribosomal-protein-S20	unknown	unknown	gnl|CDD|376586
NC_009767.1|WP_012121673.1|4154692_4156084_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|224271
NC_009767.1|WP_012121665.1|4143698_4145102_+|aspartate-kinase	unknown	unknown	gnl|CDD|235773
NC_009767.1|WP_012121657.1|4127781_4128630_+|glucosaminidase-domain-containing-protein	unknown	unknown	gnl|CDD|376625
NC_009767.1|WP_041330955.1|4157117_4157573_-|chemotaxis-protein-CheW	unknown	unknown	gnl|CDD|366716
NC_009767.1|WP_012121661.1|4136572_4138189_+|ATP-binding-protein	unknown	unknown	gnl|CDD|223510
NC_009767.1|WP_012121674.1|4156080_4157121_-|chemotaxis-specific-protein-glutamate-methyltransferase-CheB	unknown	unknown	gnl|CDD|234828
NC_009767.1|WP_012121666.1|4145377_4146436_+|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|236329
NC_009767.1|WP_041332098.1|4150197_4151145_-|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl|CDD|235511
NC_009767.1|WP_012121662.1|4138417_4140223_-|M61-family-metallopeptidase	unknown	unknown	gnl|CDD|226483

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121658.1|4128954_4130049_+|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|236323	PRK08651, PRK08651, succinyl-diaminopimelate desuccinylase; Reviewed.	6.8313e-66
NC_009767.1|WP_157042857.1|4146791_4147655_+|methyltransferase-domain-containing-protein	gnl|CDD|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	8.19046e-25
NC_009767.1|WP_012121655.1|4123429_4126345_-|GAF-domain-containing-protein	gnl|CDD|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	5.52804e-55
NC_009767.1|WP_012121671.1|4151382_4152384_-|aldo/keto-reductase	gnl|CDD|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	2.10907e-161
NC_009767.1|WP_012121672.1|4152861_4154586_+|hypothetical-protein	gnl|CDD|223944	COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion].	0.00804284
NC_009767.1|WP_157042678.1|4147823_4149545_-|murein-biosynthesis-protein-MurJ	gnl|CDD|240528	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.12648e-104
NC_009767.1|WP_041332094.1|4127040_4127424_-|methylglyoxal-synthase	gnl|CDD|179969	PRK05234, mgsA, methylglyoxal synthase; Validated.	9.03048e-69
NC_009767.1|WP_012121659.1|4130455_4131640_-|DUF4938-domain-containing-protein	gnl|CDD|292908	pfam16292, DUF4938, Domain of unknown function (DUF4938). A small family consists of several uncharacterized proteins around 300 residues in length and is mainly found in various Chloroflexus, Comamonas, Delfitia, Rubrivivax and Roseiflexus species. Several members are annotated as cyanophycin synthetases, but the function of this family is unknown.	1.76609e-39
NC_009767.1|WP_012121663.1|4140283_4142200_-|hypothetical-protein	gnl|CDD|227308	COG4974, XerD, Site-specific recombinase XerD [DNA replication, recombination, and repair].	0.00860506
NC_009767.1|WP_012121664.1|4142638_4143679_+|threonine-synthase	gnl|CDD|236013	PRK07409, PRK07409, threonine synthase; Validated.	0
NC_009767.1|WP_041330952.1|4149918_4150191_+|30S-ribosomal-protein-S20	gnl|CDD|376586	pfam01649, Ribosomal_S20p, Ribosomal protein S20. Bacterial ribosomal protein S20 interacts with 16S rRNA.	2.64878e-23
NC_009767.1|WP_012121673.1|4154692_4156084_-|tetratricopeptide-repeat-protein	gnl|CDD|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	4.12774e-82
NC_009767.1|WP_012121665.1|4143698_4145102_+|aspartate-kinase	gnl|CDD|235773	PRK06291, PRK06291, aspartate kinase; Provisional.	0
NC_009767.1|WP_012121657.1|4127781_4128630_+|glucosaminidase-domain-containing-protein	gnl|CDD|376625	pfam01832, Glucosaminidase, Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.	6.04129e-05
NC_009767.1|WP_041330955.1|4157117_4157573_-|chemotaxis-protein-CheW	gnl|CDD|366716	pfam01584, CheW, CheW-like domain. CheW proteins are part of the chemotaxis signaling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and other related proteins that are involved in chemotaxis. The CheW-like regulatory domain in CheA binds to CheW, suggesting that these domains can interact with each other.	3.30626e-17
NC_009767.1|WP_012121661.1|4136572_4138189_+|ATP-binding-protein	gnl|CDD|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	1.07191e-36
NC_009767.1|WP_012121674.1|4156080_4157121_-|chemotaxis-specific-protein-glutamate-methyltransferase-CheB	gnl|CDD|234828	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB.	7.0964e-117
NC_009767.1|WP_012121666.1|4145377_4146436_+|aspartate-semialdehyde-dehydrogenase	gnl|CDD|236329	PRK08664, PRK08664, aspartate-semialdehyde dehydrogenase; Reviewed.	0
NC_009767.1|WP_041332098.1|4150197_4151145_-|DNA-polymerase-III-subunit-delta	gnl|CDD|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	3.14895e-47
NC_009767.1|WP_012121662.1|4138417_4140223_-|M61-family-metallopeptidase	gnl|CDD|226483	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only].	4.31348e-163

Protein sequences

>NC_009767.1|WP_012121665.1|4143698_4145102_+|aspartate-kinase
MPLLVMKFGGTSVGDAAAIRSVAAITEAQRATWGQVALVVSAMSGVTDMLIRGATTAASGDQQTFRAMDRLLREKHAAALAELVSDERERADVSDQVFRLIDEFSMLCHSVAVLGELSPRAVDAISSLGERMSVRVVAAALRARGIPAEALDATGFVVTTAHFGDARPLQDVTRERTRAQVLPLLERGIVPVITGFIGATEQGVTTTLGRGGSDYSGAIIGAALDADEVDIYTDVDGVMTTDPRLSPDARVIPVLSYAEMGELAYFGAKVLHPRTIRPVVERGIPLRVRNTFNPSHPGTLVVQDVASNGQTVKAVTAIRNLSLITVEGRGMIGVPGVAARTFGAVASVGANVLMISQASSEQSICFVVPSNTVPQVTYALEHNLAMELARRDIDRIWARDDVAIITAVGAGMRETPGVAARVFGALAESQINVIAIAQGSSECSISTVVAASDCDAAVRAVHRLTQG
>NC_009767.1|WP_012121664.1|4142638_4143679_+|threonine-synthase
MLFDRYGAFLPLTEQTPRLSLGEGDTPLIHAPRLARAIGVRELFLKYEGANPTGSFKDRGMVVAVAKALEAGATSVICASTGNTSASAAAYAAHAGIESIVVVPAGKIALGKLAQALMYGARLLVIEGNFDQALHIVRDLAQTYPVTIVNSVNPYRLEGQATAAYEICDALGGPPDALCLPVGNAGNITAYWMGFRRYHEAGRIDRLPRMLGFQAEGAAPIVRGHPVEHPETIATAIRIGNPASWCYALDARDQSGGLIDWVSDDQILQSWRDLARLEGVFVEPASAAGIAGLRRVIAEGRAEPNARYVAVLTGHGLKDPGLAVEQFDVPEPTPADMDAILRWLGW
>NC_009767.1|WP_012121663.1|4140283_4142200_-|hypothetical-protein
MAQREPTIASILLELAEEYDRVVAEREIYERVLQRRPSQARDPFASIRARLRFGANEVGWVRLGDGALMPLRVALTGLRFRVTPGPHELATGLLLRTHLFPFVAPYHDDLTLKDASGTLIPFRFDSIELVDDLFGPLAQSAIDISDWMRREGMFDGDTILVTIERVAPLTLRLQADHAALVRSADVLRQEQELIEGIAARVATSRSLPISAADVVLPVFARAAWRTTYAGRSWQELVANDPRLRLINGIFLSDRTYRALADILEDQDSGMWETHDSELLAAIDALQRELLESRREAAAQELWNGIAPRASTARVVFDTRSGETTVVQLEPINALQDYSDQIDERVRKGEYDHDAWTLTDDEDGLFAAADLDNDDLSIIDDLREFIAERPELLAAARQLIAELSPEEIERLHSTENIEEIQQILAARFHRMLPDNPHLFATLVPYVASGTTSSDFNGGPPELEDGADDDEVSTLDEEWDENVEEWDEDLDEQLTPNDEALAVSHELMERFYAFLLAQGKSEATAASRTGDLWIYADFLASYYAQTLAEGNYATLDECLFFFYPRRVANSSPRGARELCTSLKQFYAFLRTERNIDDRFAREMWRRRDQVARVVDLYEQIDTDSPQFGRLFVRLFAPYTV
>NC_009767.1|WP_012121662.1|4138417_4140223_-|M61-family-metallopeptidase
MPLVYSISMLRPHTHLYDVTLDIPSVDGPTLDLALPAWTPGSYLIRDYARHVQQFAAANDRGEPLPWQKIDKTTWRIMASNARSVRVTYQVYAFDLSVRTSHLDGTHGYFNPSNLCMYRCGHLHEPCVVHVQTPLEWRVTTGLERIDGAGERTGWATFRANDYDELVDSPFECGTHRLLTFEVDGIPHEIALWGRGNEDERQILADTRTIVETTRAMFGGLPYQRYVFIVHLVDGEYGGLEHRNSVSNIVDRWGFRPARSYERFLALTAHEFFHVWNVKRIRPAPLGPFDYARENYTRQLWVMEGITSYYDHLILLRAGLISRERYLETLADDIKLLQSQPGRALQSLEQSSFDAWIKFYRPDENGPNSSVSYYLKGSLVALLLDLEIRRRTGGARSLDDVMRYLYAEYAGDQVHDLYSGAFAKRPGFDDDDGFCRAVEAVAGEEGGAYRALLARAVASTDELEYDRAFDAVGLRLVWGHSLEKENDHLPAWHGLRLKTDHGRLKVSVVLAGGPGESAGIYAGDELIALDGVRIDEERLKARLAERKPGDTVLFSLFRRDDLLHIPLQLTESPPDTLTITPVESPTEEQQRLLDGWLNVAR
>NC_009767.1|WP_012121661.1|4136572_4138189_+|ATP-binding-protein
MSVLNRKRIGVITGGSLIEGLHARLDSSVSVEDVRVGQFVVIQGEKHNFFSMVTDIALEATNRTILTRPPDGDRFFHEVLAGTATYGVVQLKPMLMLPHDLNQELRPVKTVPYHFAPALEADAQDFTRVFGADDATHFEIGRPLDMDVPVCVDLNRLVERSNGIFGKSGTGKSFLTRLILCGIIRSGTASNLVFDMHSEYGWEATSEDGKFVKGLRQLFGPQVLIFSLDAESSRKRGVSVDETITIGLDQIEADDILLLQDELNLTATAAESAYLLVDRYKQEWLKTLLGMSSADIHEFAEQAGAHAGAISALKRKLDQIQRLGFVREQAPLDAIDRLIEHLARGKHVVLEFGQYRSALAYMLTANIITRRIYRRWVEQTETFLRTKNTADKPRQLVITIEEAHKFLNPVAARQTIFGTIARELRKYSVTLLIVDQRPSSIDPEVMSQIGSRITALLNDDRDIDAVFTGVSGAAGLRAVLASLDTRQQAMVLGHAVPMPAVIRTRPYDAAFYKAMGFVETSIAERRNRAYAEMDELFP
>NC_009767.1|WP_012121659.1|4130455_4131640_-|DUF4938-domain-containing-protein
MSVEIVRITTFDGPHCFDPRPGVLARLRADHDCSAALRAVLKDAAQRVGLVIGNPHIESRSTGDTIWHDLFFVTPMPAIGAEMVRHIVALLGAQHAGDDTMDADSLLWDLQKKRRAAALPLQVLQLMAEASARGVPAFVRRDGFVQVGYGARGNAIDPALFRERGTALREADVGIGASPFARPALSSLLPWDRLGAVPVVVVSGGATSATTAAFVSRLRQRRISVAAALTASFDTARDCLTDPAAGAIVLDLDPVDLLWRGLPVEQCMVSALLDLPEELESEAGGRDDLARALGVALLVTSLGGRAVLNADHPAILALAGYAPCPLVLIARSGDHPALRAHRAAGGSALFLRRTAAVLACGTSETLIPLSPDEDPWKTLAVTALYFAFMEADAR
>NC_009767.1|WP_012121658.1|4128954_4130049_+|M20/M25/M40-family-metallo-hydrolase
MNDASVQHELTRLTCNLIAFPSTADHPDALIAAIDYVEQYARDSGIQFIHRFEVEQKPSLMITLRDTQRPALILNGHLDVVAARAEQYQPVVRDGRIYGRGSQDMKGACAVLMRLIRDLAALPDPPDVGFMFVTDEEIGGFHGTNYLLEHGWRSAFFIAAEPTDLNICYAAKGMVRFDITLHGQPAHGSRPWEGVNPILLLRDGLQALEQRFPTPREAVWATTAVPTVVRGGDTLNRIPEVVTLSLDIRHIPEETPDEIEAAVRACFPGATVARNSTGGIPLMTDPNDPHLAQLAASIERIIGRQPVFYREHYGSDARFYSGAGIPAICFGPVGAGLHSDHEWVDIASLERLYLILRDVATAAE
>NC_009767.1|WP_012121657.1|4127781_4128630_+|glucosaminidase-domain-containing-protein
MITRRQFLKASVASCAASVIAAVSRAGERPSYQVYLPLVQTIAPPLTDTPPPPTPIPVPPEDDLPPILDNAPLVGPATGTEHMAINWFVPRADRSYTAFDIGRIVGAYRVIGEIAGIDWFLALAQMAHETGHLTSFWSLRPQRNPAGIGVTGEWRADPPPDPTGWAYNTQRQRWERGISFPTWAEHAIPAHLGRLLAYALTDEQANDAQRTLITTALAVRPLSPALRGVAPTILGLNGRWAFPGTTYGQSIVALARRMRYGPATLDLSAPAEEDGDVMPEGS
>NC_009767.1|WP_041332094.1|4127040_4127424_-|methylglyoxal-synthase
MITRRATLALIAHDRKKDDMVLFTLRHRDTLARCRLVATGTTGERIARATRLEVERMLSGPMGGDAQIAARVAQGEIDGVIFLVDPLYAHPHEPDIQGLLRVCNLYNVPLATNLATAELVVAGVEKV
>NC_009767.1|WP_012121655.1|4123429_4126345_-|GAF-domain-containing-protein
MTELAHILAVDDDASVRRMLQILLTNAGYRVSVASTGEEALAYLELVTPDLVLMDVSLPGLSGQHVMERVKSDPDRPFIPVILITGYGDPEAKVAALDAGADDFLVKPVDLTELLARVRAMLRLQRSQRSLRAEQRKTELLLHLTRELGTTLDLDQLLTQFLNRLADAVGAVRASILALTGDQPRLFSSTRNRPTIPLSDILGQGVAGWVLRERKPLIIDDTRDDPRWIAVNAQQRAVRSVAAVPLVREGRVLAAITLVHHTPGYFNHDHLELLNAVAAQSAIALENAELFHLTRMQRDLLERRAEELQRINQISRHLTELMSPDQLLRLVVHLIHHTFGYPLVAVALHDDERLALEAAAGSASIERLIGQAISPDTSAAGRAIAQSEAYYVADFLQTDCAPLTGVERSVRSELAVPIQTARQVFGALSVMAYTPNAFGDADVRLLSTLASQLGIALDNARLFNMEQRRVRQLGTVNNLSLAMTARLDAAENLTIAARVIASIFEVTACGIVLTNPRVQSMRHMVFATDAARDRLPWRDLAETVVLSAPQVVRADDALLALCARALVGAGIAALALAPLLANGKQIGLVALDVTGHERQFQATDLTLLETVASLLAQVIENACLYREVEDERSTLGAVLRSAADPILLIDPHNRLLLANPAAEQRLHLGEAIGRAIDQAVDHSGLLRALSRDSLNGQSMMEVTLADGATFNVSVAPVRGANDALIGRVAVMQDITAIKELERAEQERLRAMFRRYVSPQVVEEVLAGGGEFGAPQERDIVVLFADIRGYTTLAEGLAPQILVHQILNRYFTAMTEALYRHGGTVDKFLGDGLIGVFGVPIARDDDIPRSLRAAVDLQLAFADLRNVWRRDLGLDLGMGVGIAYGPALVGNIGSPQRLDYTVIGDVVNTANRLSGLARADQIIVSHRLIDALPLGDDLPWLLRPIGPVMLKGKHEPHMVYEIVYQIAVSDDG
>NC_009767.1|WP_012121666.1|4145377_4146436_+|aspartate-semialdehyde-dehydrogenase
MTRKRIPVAILGATGAVGQRMVQLLENHPWFEIVVLTGSDRTIGRPYGELVRWILDTPIPERVANMVVQPTEEVADVAIALSALPTDVARAMEPRWAERTAVCSNASAYRAVADVPLIIPEVNPDQLALLERQRAQRGWKGCLVTNPNCATISAVMPLKPLHDAFGLQTAHISTLQAVSGAGYPGVASLDIIDNIIPNIADGGEEAKIEAEPRKLLGNVADGQVVEAQIAISAQVTRVPIIDGHTALIAASFAQKPSPEEALAVLEAFMPPEIVRHLPSSPERALIVHCNGDRPQPRRDRDAGRGMSASVGRVRACPVLDLRMVALSHNTIRGAAGGAILNAELLVASGIVS
>NC_009767.1|WP_157042857.1|4146791_4147655_+|methyltransferase-domain-containing-protein
MHRRFGGDAQRMQSVLDFLRPVRDKVLDNARLAEGDTVLDVGCGDGLIAFGALERSASGTIIFSDISQDLLNHARSLAREMGLLDRCQFLLAPAEDLSVLEDASVDVVTTRSVLIYVSAKQQAFREFYRVLKPGGRLSIFEPINRFGMDISEQPHCFAGYDVTPVIDIAQKVKALYHKLQPRDSDPMLNFDERDLIAYAEQAGFREIRLELQIEVTSPGNAAMSVKDGDWEAYVRTAWNPKIPTLEEAMRQVLTPEESETFTAHLRPLVEAHQRVHRSAVAYLWAVR
>NC_009767.1|WP_157042678.1|4147823_4149545_-|murein-biosynthesis-protein-MurJ
MKRALLNTLIVATGYLASRLLGLARDVLISHQFGTSAELAAFRASFGILDLIYLVVAGGALGSAFIPVFSEALEQRRDAWRLASAVLNLTLLALTAACAVVWVFAAPLVALSVGRGLNEAERALTVDVLRLMLIQPFLLGVGGLAKATLESFNRFTLPAIGSNLYNLGIIGGALFGPWLGIYGLVWGVNIGAALFVLVQLPGLRSVGATYRIRDDRDEQRRKAGLVVSANTAAAYQSGRESDGARASPVSFLTPFYAEGVGRMLRLLGPRILGQSAWQVNMIAIVSLASTLGSAALAANAYALQLMLLPHGLIALSMATVLFPEMARQYAAGDRVTFRATALGGVRAVLFLALPASAILGVLALPVLRALFQRGAFDTASATLTTEALAAYALGLAGFAAAEVIVRAFFAMQDTRTPVIVGIAAVALNMSLGWSFLRVGLGLGGLGLAFSLSNLFEATLLLALLGRRLGGLERDFFRAIGAMILATMACAFALALLLRSSYAIAPFVAPGDTYRWPDDFLPLVVWLAGATAAGVLAYAGVTALFRVSELSAAVARGRRILTRAWFRFAPGDGG
>NC_009767.1|WP_041330952.1|4149918_4150191_+|30S-ribosomal-protein-S20
MANTKSAEKRIRSNARRALRNKMYRSRVKTAIRKAERAIFAGAPEPELVREAMSLLDRAAVKGIIHKNNAARRKSRLAKKLAKATATPTS
>NC_009767.1|WP_041332098.1|4150197_4151145_-|DNA-polymerase-III-subunit-delta
MLFLVYGPDEYGRSEALAALKARVPAEVADLNITTLDGRRTTLSDIVAACEAMPFLADRRLVIVDDLLKHQKAGKDRDDVRAYLEHVPDACDLVFVESDEFDKRSSLFTFLKKHAEVRECVPREGADLLRWLSDRAKGLGVTLERDAAQRLTLLAGNDSRLLVTELTKLATFVGRRGRITVREVDLLVADRQEQNLFSFIDELSARRRSAALTALRRLLDDGQAAQYILFMMARQVRILMGVRDLAAQRLRPDDIANRLGQKPFVVRKALEQAHGFSDADLQRLHRRLLELDHASKTGRAAIEAGLELIVADMCS
>NC_009767.1|WP_012121671.1|4151382_4152384_-|aldo/keto-reductase
MEYRFFGRTGVRVAPLCIGAMNFGNPTDDAESMRIIDRAIDAGITMIDTADSYNHGESERIIGRALARNGRRDQVFLATKGHFPTGPGPNDRGNSRLHLIRACEDSLRRLQTDHIDLYQIHRPDPNTPVEETLAALTDLVRQGKVRYIGCSTHPAWRVMEAIMVSELKGYARYVSEQPPYNLLDRRIENELLPLCQAHGLAIIPWAPLAQGVLAGRYTDITAPPPDSRVVLRGGIYAERVTARGIEVGRAFAALAREHGLTPAQLAILWVKDQPGVTAPIVGVRTLAQLEEILPVLEMALSADLRAACDALVPPGSAVVDFHNTAGWMKMRIA
>NC_009767.1|WP_012121672.1|4152861_4154586_+|hypothetical-protein
MTAVAPDHRAAPTTPQTPPMWADVDRALADLHARKDSWVQVSLDERIALLAMLRRALADAAERWITTSLEAKGLAPGGYGEGEERTWLTILTRSLRLLHQALSDVRDHGQPQLPGGLTTRPNGQVVASVLPINRYDAAILPRMTGEVWIEPGLTAEDVLQQQAAAYRKPAEHGRVALVLNASTSSFLPVTDLLHKLFVANEVVALKLHPMQAALTSLFEETFRSLLDYGVVRLIYGDHDLDAYLCAHSLIDTVHFSGADASFDTLVFGEGQEGVERRMRHEVVLTKPFSGEVGNITPVLVVPGPWSDDDLHHHAILLVRAFVCNAAYVSAAPRLIVHHRGWRRRDSFLAAFEQVLARVPTRQSPFPEARRQLDALLNAHARAHRIGQADMDHLPWTVIPDLTPSALEADCFVRTMFCPAVGELALDAKDAAAFIDAAVEFLNQRVRGTLAATILIHPRTLRDRRARAAFERALNDLQYGTVTINAVAQQAVLAGVLPWGAFIAESDGRSSGKVANPLMLPRPQKSILRGSFRIPRMFLSVDPHHNIEMCKAITRLEQAPSPWHLAQLLRLTLRR
>NC_009767.1|WP_012121673.1|4154692_4156084_-|tetratricopeptide-repeat-protein
MNTTFSDDLFRRFRDLLLTRSGLYFPDHRRSDLHHCLTMVLPATGYATLEALYAAAVVDDKTLHTVIEGVTVGETYFFRNTSQFTALRDRILPDLIARREVIRSLRFWSAGCATGEEPYSLAILLHEALPDPDAWQITILATDINTAFLNRARAGVYGAWSFRETDPALRDRYFERLEGTRWRIRSDLRRQVLFARLNLVEDEYPAVMNGTTMQDVILCRNVLIYFDDDTIRAVVRRLYRALTPGGWLIVGHAEARSDFFAQFEVVNCPGTVIYRKPLHAPLFDEAIPSVPARQMVRPLSTTSADVASLLLPAPAAPSPSFVSDTPVADNAAPDTLAVARQAADRGDLATAMRLCETMVQHQPLSAEAHLLNGQILEQQGRLDEALAAYRRAVYLDHSLYLALLAMAGILHRTGHVDEAYRAYRRLLRALATLPPHAPVPSFDNATAAELQMFIQRQMEALRR
>NC_009767.1|WP_012121674.1|4156080_4157121_-|chemotaxis-specific-protein-glutamate-methyltransferase-CheB
MSSEPSPIRVLLVEDSPGQRALLIHLLHASGAFTVVGVASNGRQAVQEASRLRPDVIAMDIHLPLMDGYEATREIMRRCPTPIVMISASAGEKKSIDALAAGALTVIRKPGGRHADPADSENFLKTLRLMAGVRVVTRFAPRALPPSTTQAQPVSAPVGGAQVLAIAASTGGPAAVQTILSELGRGFPLPILLVQHIARDFVPALQDWLQRTTPLPIRIAAHGERLAPGCVYLPPDGFHLLAGGRGVVDLRPTHPDDRYCPSADLLFRSVAQAYGARAIGVILTGMGDDGARGLKELRERGAVTIAQDEASCVVYGMPRSAVESGAVTREAPLDQIASSIRTLVAV
>NC_009767.1|WP_041330955.1|4157117_4157573_-|chemotaxis-protein-CheW
MGDAHVSSLTGQTLVLCRIGTQDYALPLDAALRIVPLPALTVIPDSRPEICGWLNLYGRHVPVLDGRRLVGDPPHYDLSSHIVIINGEQDAATPVLGLLVDQVYGLISHLPTAMHPLKRAEAAGNLFCGIIQHDHRSCPVFDVAELRRMAA

Crispr_ID: NC_009767_80

• CRISPR_ID: NC_009767_80
• CRISPR_location: 4221632-4221723
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_80

Consensus_repeat	Method
GCGCAACATCACCATCGCCAACGGACGGAGC	CRISPRCasFinder

spacers of NC_009767_80

>80.1|4221663|30|NC_009767|CRISPRCasFinder
GCATCGCAAGCCGCCGCCGGCGCGCGCTAC

CRISPR arrays and Neighbor proteins around NC_009767_80

CRISPR arrays

The CRISPR arrays of NC_009767_80

>merge|NC_009767|80|4221632-4221723|CRISPRCasFinder
GCGCAACATCACCATCGCCAACGGACGGAGCGCATCGCAAGCCGCCGCCGGCGCGCGCTACGCGCAACATCACCATCGCCAACGGACGGAGC

>NC_009767|80|71|4221632-4221723|CRISPRCasFinder
GCGCAACATCACCATCGCCAACGGACGGAGC	GCATCGCAAGCCGCCGCCGGCGCGCGCTAC
GCGCAACATCACCATCGCCAACGGACGGAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121727.1|4227304_4227763_+|transcriptional-repressor-NrdR	unknown	unknown	gnl|CDD|234774
NC_009767.1|WP_012121730.1|4229516_4229867_+|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl|CDD|377129
NC_009767.1|WP_012121731.1|4229859_4230288_+|transcription-antitermination-factor-NusB	unknown	unknown	gnl|CDD|273891
NC_009767.1|WP_012121719.1|4210610_4212047_+|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009767.1|WP_083760329.1|4223822_4224101_-|hypothetical-protein	unknown	unknown	gnl|CDD|370721
NC_009767.1|WP_012121721.1|4214229_4215156_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293812
NC_009767.1|WP_012121728.1|4227778_4228672_+|restriction-endonuclease	unknown	unknown	gnl|CDD|377369
NC_009767.1|WP_012121722.1|4216222_4218973_+|glycoside-hydrolase	unknown	unknown	gnl|CDD|225789
NC_009767.1|WP_157042682.1|4225523_4225796_-|hypothetical-protein	unknown	unknown	gnl|CDD|372648
NC_009767.1|WP_012121716.1|4207509_4208370_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009767.1|WP_012121715.1|4206662_4207502_+|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009767.1|WP_012121732.1|4230339_4230588_+|acyl-carrier-protein	unknown	unknown	gnl|CDD|179197
NC_009767.1|WP_012121724.1|4222935_4223664_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121718.1|4209215_4210595_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|223679
NC_009767.1|WP_012121717.1|4208526_4209219_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330965.1|4213109_4213772_-|ComF-family-protein	unknown	unknown	gnl|CDD|223970
NC_009767.1|WP_012121733.1|4230718_4231717_+|translocase	unknown	unknown	gnl|CDD|224739
NC_009767.1|WP_012121713.1|4204025_4204886_-|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009767.1|WP_012121714.1|4205223_4206666_+|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl|CDD|184633
NC_009767.1|WP_012121729.1|4228691_4229444_+|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl|CDD|235500

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121730.1|4229516_4229867_+|Asp23/Gls24-family-envelope-stress-response-protein	gnl|CDD|377129	pfam03780, Asp23, Asp23 family, cell envelope-related function. The alkaline shock protein Asp23 was identified as an alkaline shock protein that was expressed in a sigmaB-dependent manner in Staphylococcus aureus. Following an alkaline shock Asp23 accumulates in the soluble protein fraction of the S. aureus cell. Asp23 is one of the most abundant proteins in the cytosolic protein fraction of stationary S. aureus cells, with a copy-number of >25000 per cell. A second Asp23-family protein, AmaP, which is encoded within the asp23-operon, is required to localize Asp23 to the cell membrane. The overall function for the family is thus a cell envelope-related one in Gram-positive bacteria.	1.67781e-08
NC_009767.1|WP_012121731.1|4229859_4230288_+|transcription-antitermination-factor-NusB	gnl|CDD|273891	TIGR01951, nusB, transcription antitermination factor NusB. A transcription antitermination complex active in many bacteria was designated N-utilization substance (Nus) in E. coli because of its interaction with phage lambda protein N. This model represents NusB. Other components are NusA and NusG. NusE is, in fact, ribosomal protein S10. [Transcription, Transcription factors].	1.18033e-44
NC_009767.1|WP_012121719.1|4210610_4212047_+|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	7.93125e-160
NC_009767.1|WP_083760329.1|4223822_4224101_-|hypothetical-protein	gnl|CDD|370721	pfam09821, AAA_assoc_C, C-terminal AAA-associated domain. This had been thought to be an ATPase domain of ABC-transporter proteins. However, only one member has any trans-membrane regions. It is associated with an upstream ATP-binding cassette family, pfam00005.	5.63199e-13
NC_009767.1|WP_012121721.1|4214229_4215156_-|MBL-fold-metallo-hydrolase	gnl|CDD|293812	cd07726, ST1585-like_MBL-fold, uncharacterized subgroup which includes Sulfolobus tokodaii ST1585 protein; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Sulfolobus tokodaii ST1585 protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.78763e-92
NC_009767.1|WP_012121728.1|4227778_4228672_+|restriction-endonuclease	gnl|CDD|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	2.0235e-08
NC_009767.1|WP_012121722.1|4216222_4218973_+|glycoside-hydrolase	gnl|CDD|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	1.57897e-26
NC_009767.1|WP_157042682.1|4225523_4225796_-|hypothetical-protein	gnl|CDD|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	0.00241992
NC_009767.1|WP_012121716.1|4207509_4208370_+|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.1144e-07
NC_009767.1|WP_012121715.1|4206662_4207502_+|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.00531e-13
NC_009767.1|WP_012121732.1|4230339_4230588_+|acyl-carrier-protein	gnl|CDD|179197	PRK00982, acpP, acyl carrier protein; Provisional.	3.37451e-32
NC_009767.1|WP_012121718.1|4209215_4210595_+|AAA-family-ATPase	gnl|CDD|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	1.13512e-10
NC_009767.1|WP_012121727.1|4227304_4227763_+|transcriptional-repressor-NrdR	gnl|CDD|234774	PRK00464, nrdR, transcriptional repressor NrdR.	1.6205e-78
NC_009767.1|WP_041330965.1|4213109_4213772_-|ComF-family-protein	gnl|CDD|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	5.72184e-48
NC_009767.1|WP_012121733.1|4230718_4231717_+|translocase	gnl|CDD|224739	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion].	6.18818e-12
NC_009767.1|WP_012121713.1|4204025_4204886_-|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.46503e-08
NC_009767.1|WP_012121714.1|4205223_4206666_+|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl|CDD|184633	PRK14338, PRK14338, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NC_009767.1|WP_012121729.1|4228691_4229444_+|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl|CDD|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	1.05464e-130

Protein sequences

>NC_009767.1|WP_012121722.1|4216222_4218973_+|glycoside-hydrolase
MLSYHMPLPGPWEFRFDDQSDWRPIAVPGCWEDAGFVKDRSGPAWYRTSFVIPHELEGRRLFLHFGAVSYHCEAFIVRDSGDMCSIGTHTGMWDAFDLEIGDAAAPGEHVTLLVRVEKPASLSDGPESASLPGRFPLRETLAGFLPYVWGHSHGGIWQEVALIACGATRFLDAWVHGAPDGHIFVEAELDGPARVTLELYRPDGSFILSAEEDAVRVETASGIRYRLHMDGPTSDARLWSPDDPALYRAVLRAGYDDRIELRFGLRSFDADGATLRLNGAPIYPRMILSWGWRWETFAPNPGPERVRADFERLKRMGYNGIKCCLWFPPRYYFDLADELGMLLWIELPMWLPRVTDHFRRQTPVEYERLVRQARRHPSVVLYSLGCELGKDVGADILGSLYAMTRSMCGDALVRDNSGSGEAYGGLLNEFAQYYDYHFYADLHFFRGLLDAFSPRWRPAQPWLFGEYCDYDTFRDLRRYRRADGSRPWWLSADLAINPTGARWTNEAPFLEERLRAQGLWERSAELEAFSYAHGLLHRKWTIETTRMYREVSGYVITGEADTPITSAGMWDATGALKYDPTEFRRFNNDLVALIGWDRRRDWVRGGDRAAFWDVWSYNAGTLVRPHVIVSHYGAQGGPARAAWSIAFDDEAPFASGDIVASHDVMPGDVREIGVAEFTAPDVSAPLRAMFRVSLNVGTQRTDNAWPIWFFPANPWATMRNVAIYDPLGRLRDLTRLAPQVVEVTHADLRSEAGARVDLHAAPFVVVASAWTRALSMYTRGGGRVVLLQDGDGPPGPVATAAMPFWREALRVCEPHPAWGDFPHDGWAGLQFFGCATDCALDTQPLDGLTRPILRRIDTRTTAVHDYAAEVVWGEGRLIVSTLRIYGGAGEQPSGIGRNTSAAYLLLCWVKYLGSKR
>NC_009767.1|WP_012121721.1|4214229_4215156_-|MBL-fold-metallo-hydrolase
MTDPRYGLPETIALIDDLHLGCSQVVGTYVMLGDDPVIVDPGPASVLPNLEAGLKQIGLSFSDLHGIALSHIHLDHAGATGSLVRYFPHLKVYVHHRGAPHMIAPDKLLRSATRIYGGQMDYLWGEFLPVPVDNIVTLGGGETLRIGGRALRVFDAPGHAAHHLIYFDESTGAAFVGDTTGLRMPGHTYVRPATPPPDIDLEAWRRTLDMLLSLNPRMLLLTHFGPAHDPERHIADMWDHVLRWAETVRVSLERGEEESAAEARLVALADADLGDVDEAMRRQYAQAGAVEMSWHGLARYWRKRMDAS
>NC_009767.1|WP_041330965.1|4213109_4213772_-|ComF-family-protein
MTLARLIDAFLSLVLPDRCAGCGRLGSVLCDECCRRLVGYDGDPPRVADQLTGVRIAYVFEGPLRHALHQLKYRRRRRVARPLGALLASYLRAHPLPCDALLPVPLHRERLAERGFNQAELLAREVAAGTGLPLIAGPLVRLRATKQQALLDVAGRIENVADAFMWRGPAPPARVVIVDDVLTTGATVNACAAALRAGGAREVYALALARSRGQAPLSHR
>NC_009767.1|WP_012121719.1|4210610_4212047_+|CpaF-family-protein
MSLLKRIGGSQPQSTSEPAVPVSAPAPSDAANHTPASRTAPSTVSSGSEMSQQRMLELSLWIVDRILSSLGNQQELKRSPEMERQLQEKFTLAYRQSGVNLTDDQTKHLYDMVMDELFGFGPIEPLLRDDSITEVMVNGPRAVYVEQKGKITLTQVRFANDEHVLKVIDRIIRPLGRRIDRKWPMVDARLPDGSRVNAIIPPCAIDGPSITIRKFAKKKLTVEDLIRFGSMTPEMAEFLRACVVSRLNIIVSGGTGSGKTTLLNVLSNFIPPDERIVTIEDSAELKLGQDHVVRLESKPPEIDGTGRVTINDLVINSLRMRPERIVIGECRGGETMAMLQAMNTGHDGSLSTLHANSPRDAIARMETMAMMAGMDMPLRVIREQIASAIDLIVQQTRLEDGSRKISYITEVQGMEGDVVVLQDIFLLHILGKTPEGKIISELRPTGTRPRFTARLEAHGFKLPPSIFGATVPGQKRPW
>NC_009767.1|WP_012121718.1|4209215_4210595_+|AAA-family-ATPase
MSFFSQQFADRQRAAASPASAAGGVAIPPEPASVEETGLSMGFLNDLVLKVVYFHGNITGQQIAEVTKLPFFGVLDKVLEFLKLEEYVDIVGAQGGFNERAFQYVIATKGRLKVHEVLDRSQYAGPAPVPLDQYIAMVHRQSVGDMVVDAKTVRQAFAHLVVSDRMLDRIGPAANSARSLFLYGPPGNGKTTIAEGIANMLGGNVLIPYAVEVDGQIIKLFDPLNHQVVEQPAAAPTHEPAVSFEGRPIVDSPLPDRRWLVCKRPRVMVGGELILEQLELIFDPIAKVYEAPYQMKANGGLFLIDDFGRQKCRPQDLLNRWIVPLEKKVDFLALQTGKKIQVPFDVLIVFSTNLSPQDLVDDAFLRRIRHKIEVPNPTPEEFRAIFQRVAKAKNIPYSDEGLRYLILERYKRDGRDLRSCHPRDLCDQILDEAKYRGIPPSMSRELLDRAYDAYFVKLS
>NC_009767.1|WP_012121717.1|4208526_4209219_+|hypothetical-protein
MEVRIDEKGKFFTPRITKDAVTAFVRTPDKVIIGSVYVRPGNRLTDELNGDPSAFLPITDARVYRADDESFLLQTSFLLAAYREILLIGEFDALATIRDVPWNTQAAEPTPLIRDGEDMGVHVNERGKYFTLRTPKDAVLCAVRGSDLAVLGYLYIRSDRRLKDELNDEQARYLPMTDARVFRVSDNKLLYHASFLLIGRQAIDMVAPIDSVTRASDVPWLPVRSAEGSA
>NC_009767.1|WP_012121716.1|4207509_4208370_+|tetratricopeptide-repeat-protein
MTLTRQDERFRLQRRLQNQAVELAVNSRWEEAVQVNEKLIGLAETTETYNRLGKAYFELGRLTEARDAYRNALRLTPNNRIARRNLERIEELLAKSASLSTVSLKAGRQLVDLRLFVTEVGKTALTSLIDVQRGPALAAIVTGEKVELRPEGRGVAVYDTSGALIGRIEPKLAQRLNELMAGGNRYIAAVAHIDGRQVRIIIRETYQAPSQRGRVSFPGKLSESALRGAFISGAQFDEFGEELLEEEEGAEVREDVDEEAFGGEDEELGLEEIEPDIGDDEDLIEE
>NC_009767.1|WP_012121715.1|4206662_4207502_+|CPBP-family-intramembrane-metalloprotease
MNTLDVPASRLPMRVTPLAAIGALIADLLIALGAALALSGAVVGAILVLRAAQSGLELGAIGQLNGQDITRLIGADGMVALLLLQNLVFIGVAVVRVRVLRREPLSVLGFSAPQPFRLVFLGVGLGLLALLLNGIVGVLFVSAGIRQNQAALYPLFPGDYAGQALFFIGAVVLAPIGEEVLFRGYLFGSLRRLAGDSRAGIAVAYGVSALVFALSHSLAATEGLIGLLVPSFLIGLVFAWGFDRSGSLIPAIVAHAINNGIAFAALLTCVNNPGMCPQM
>NC_009767.1|WP_012121714.1|4205223_4206666_+|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MTDVITLHLPAEARADQSRDATPRERRYYVWTVGCQMNVSDSERLEAALQGVGYAPAERPEDASFIVLNSCSVRASAEERILGKLSEVQRIKRNHPDTKIVLWGCMVGPGNQSIFQSRLPMVDHFVSPSAVDEVLALAPNPIYQLDEPALPVARWDHPPVSVHVPIQYGCNMSCSFCVIPLRRGRERSRPLAEIVEECRRIVARGAKEITLLGQIVDSWGHDLPGRPDLADLLRAVHEIPGLLRLRFLTSHPAWMTDRLIAAVAELPRCMPDINLPVQAGDDALLKIMRRGYTVQRYRELIAKIRDAIPHVSLTTDVIVGHPGETRERFEGTKRLLDEIRFDKVHIAAFSPRPGTRAAEMELDPALAVPEGEKQLRRIELERIQEQIATERNARFLNQTVEVLVEGEHKGKWRGRTPGNKLVFFSDPRDRTGQLVNVRIIHTGPWSLQGVLAQSAGESPMLNGAPEPLDATPVMQGAITR
>NC_009767.1|WP_012121713.1|4204025_4204886_-|CPBP-family-intramembrane-metalloprotease
MPAVAQGHPPSRGLIHHNPIVAYFLIAYAFSWLLGGVLIAGYHGLVMAPTWLHYVSAFGPMVAAIVVTAARDGRAGLAELWQRVIRADVGLRWWLVALGTPLALGVVAALVSTFEQGALPDVALFGEVDYLGNIGVLAALGLWIATYGFGEEIGWRGFALHRLQSGGWIRAAVIIGVLWGAWHLPYFFYKDNFIALGMGGFVGYLISIVMGSILLAWIYRGSGNSILMVALWHGTFDFVSASPIAAGSANAVISVVVITWVLVILWQAKISQSSPPGTEALHPPDE
>NC_009767.1|WP_012121724.1|4222935_4223664_+|hypothetical-protein
MRTAAFHFRPALLPVALLPAGQNAPPAYAGNSAINSFASSVAASSLPGVRFVPMAAANNIVAHGAAVDRPLLNGNLNAIVLATQNWTPGGEGGISNNHAIGVWYDSAQNKRVVFNQDVAAMPAGARFNVMALNNLTAPPWSKAAFVHTATSGNTHDNRTALNHSLSNSAPPAFVFTTDNYNPGVVGGTYNNHHTGVWYTGVYDPVFPNRWAIFNQDNATMPTNTRFNVLVIVRRVCLPNVLR
>NC_009767.1|WP_083760329.1|4223822_4224101_-|hypothetical-protein
MGVGCGVRRRPRLSARRAPLFRWRLSLLWSSQRQQLNRGVVQTALELAFPQEEAERQVEIAIQWGRYGEVLAHDDAEETFYLEPAETKSVTV
>NC_009767.1|WP_157042682.1|4225523_4225796_-|hypothetical-protein
MKFHLVPQHIRDQDAHRDMFGSSASRDETRLGYRLSSVVTLGGVILELTSANVDERESALGNKGNVSASLAAQLRYEGVKLIMLPRDNRC
>NC_009767.1|WP_012121727.1|4227304_4227763_+|transcriptional-repressor-NrdR
MRCPYCQHPDSDVIDTRKLHNGETIRRRRKCEACGRRFTTYERVETVSITVVKKNGEREPYEREKLMRGVRTACYRRPVPAQALESLANDIEAELMALDEPEVPSSLIGDMVMRRLRTIDDVAYIRFASVYRSFADIGKLREAVDELLEQGR
>NC_009767.1|WP_012121728.1|4227778_4228672_+|restriction-endonuclease
MSIDVSDQPQTTPQEERRANPVARFFGEIRAGLREIRWIIVLLYAIAGGLLMPLSLTAGGIAGFLAGIVPVGVGLLLARNVPGHYALHGFLTGALASVVAAGMLWYFIFQTQFGVSGAGMVEPGTPPWDAWLVLSGFFGFSLIVFCTFGASTAGRIEERNRALRDEIKQRGGALERPSAIREPDDIRGLSLPQLGYYVNNLFKKQGFTFKDYRFLHKDKYLDIWLEYKDEPWHLRLSVADKVAPGAIESLLQEMKREGCTKGVVITSTEFTPAAIKAAKDRPVALIDGATLYQIAEK
>NC_009767.1|WP_012121729.1|4228691_4229444_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MQISLKGKIAVVTGGSRGIGRAIATTLAAAGATVVVNYQRNAAAAEETVAAITAADGAAISMQADVSAAEEVERLFKTVIERYGTVDILVNNAGITRDTLLLRMKEDDFDAVIDTNLRGVYLCTKAALRPMTKARSGRIINITSVVGLIGNAGQSNYAAAKAGIIGFTRAVAREMASRNITVNAVAPGYIETELTAGLGDQVRTAILEAIPLGRLGTPQDVANLVCFLASDAAAYITGQTLTVDGGMVMS
>NC_009767.1|WP_012121730.1|4229516_4229867_+|Asp23/Gls24-family-envelope-stress-response-protein
MSQSLGHVTVAAPVLLALVRAALRETPGVVRLAHAPSVQGETPVFAGPGAAIAIGATGVHVTCAIVVARGARLAQVAATAQAAVATALRELAGVDVAAVDVSIADVAAIEKTRDHG
>NC_009767.1|WP_012121731.1|4229859_4230288_+|transcription-antitermination-factor-NusB
MASLRHRVRAIALQILFELDATDHPPDQVVGRRLEEEQLPPEGERFLRRLVFGAWEHAAHLDRIIEEAAPNWPVSQMPGVDKAILRIALFEALIDKEEKTPLKAIINEAVELAKQYGSDNSSRFVNGVLGTVVSRYRERSKG
>NC_009767.1|WP_012121732.1|4230339_4230588_+|acyl-carrier-protein
MPSPEMEARLKQIVAEQLGVDESKIVPTARFTEDLNADSLDLVEMIMELEEAFGVEIPDEDAEKIITVQDALNYIEQKLQAA
>NC_009767.1|WP_012121733.1|4230718_4231717_+|translocase
MELLGVGPGEILLILVIMLLVFGPERLPEFARQAGRFVVRVRDWIQRSPDAAMVLRARAELESELQAIRAELTREVESVRQDLQSVRSDLADAGKLIEQSAQEAASASTIDLPDGTGKEIPSLNPPTPATPGQSPATVSPGADNAAVPVVPHADSMAAPVVQHADGMATPVVPAGDGAAMPEFEVDPGPIGARRARIAEVSAAQTPAEPSRTPVIAGGETVARGARSEPVPSRTRVVAEDSPFAADMARIDDLSRQVSMIAEELARLRVTLLQRMAEEKRRRDHVDAIANETLAPLNGTDSAASLSNGAASDSDLAPADDAQADLRRVESSS

Crispr_ID: NC_009767_81

• CRISPR_ID: NC_009767_81
• CRISPR_location: 4224432-4224538
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_81

Consensus_repeat	Method
GTATCAATGCCCATCGGCTCGAGTGGTTGCAGCAGGA	CRISPRCasFinder

spacers of NC_009767_81

>81.1|4224469|33|NC_009767|CRISPRCasFinder
TTGCTCGCGCTTCGCCCCTGGGTGTCTGGTGCG

CRISPR arrays and Neighbor proteins around NC_009767_81

CRISPR arrays

The CRISPR arrays of NC_009767_81

>merge|NC_009767|81|4224432-4224538|CRISPRCasFinder
GTATCAATGCCCATCGGCTCGAGTGGTTGCAGCAGGATTGCTCGCGCTTCGCCCCTGGGTGTCTGGTGCGGTATCAATGCCCATCGGCTCGAGTGGTTGCAGCAGGA

>NC_009767|81|72|4224432-4224538|CRISPRCasFinder
GTATCAATGCCCATCGGCTCGAGTGGTTGCAGCAGGA	TTGCTCGCGCTTCGCCCCTGGGTGTCTGGTGCG
GTATCAATGCCCATCGGCTCGAGTGGTTGCAGCAGGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121727.1|4227304_4227763_+|transcriptional-repressor-NrdR	unknown	unknown	gnl|CDD|234774
NC_009767.1|WP_012121730.1|4229516_4229867_+|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl|CDD|377129
NC_009767.1|WP_012121731.1|4229859_4230288_+|transcription-antitermination-factor-NusB	unknown	unknown	gnl|CDD|273891
NC_009767.1|WP_012121719.1|4210610_4212047_+|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009767.1|WP_083760329.1|4223822_4224101_-|hypothetical-protein	unknown	unknown	gnl|CDD|370721
NC_009767.1|WP_012121721.1|4214229_4215156_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293812
NC_009767.1|WP_012121728.1|4227778_4228672_+|restriction-endonuclease	unknown	unknown	gnl|CDD|377369
NC_009767.1|WP_012121722.1|4216222_4218973_+|glycoside-hydrolase	unknown	unknown	gnl|CDD|225789
NC_009767.1|WP_157042682.1|4225523_4225796_-|hypothetical-protein	unknown	unknown	gnl|CDD|372648
NC_009767.1|WP_012121716.1|4207509_4208370_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009767.1|WP_012121715.1|4206662_4207502_+|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009767.1|WP_012121732.1|4230339_4230588_+|acyl-carrier-protein	unknown	unknown	gnl|CDD|179197
NC_009767.1|WP_012121724.1|4222935_4223664_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121718.1|4209215_4210595_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|223679
NC_009767.1|WP_012121717.1|4208526_4209219_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041330965.1|4213109_4213772_-|ComF-family-protein	unknown	unknown	gnl|CDD|223970
NC_009767.1|WP_012121735.1|4232704_4233598_+|16S-rRNA-methyltransferase	unknown	unknown	gnl|CDD|336604
NC_009767.1|WP_012121733.1|4230718_4231717_+|translocase	unknown	unknown	gnl|CDD|224739
NC_009767.1|WP_012121734.1|4231729_4232665_+|twin-arginine-translocase-subunit-TatC	unknown	unknown	gnl|CDD|376413
NC_009767.1|WP_012121729.1|4228691_4229444_+|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl|CDD|235500

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_157042682.1|4225523_4225796_-|hypothetical-protein	gnl|CDD|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	0.00241992
NC_009767.1|WP_012121731.1|4229859_4230288_+|transcription-antitermination-factor-NusB	gnl|CDD|273891	TIGR01951, nusB, transcription antitermination factor NusB. A transcription antitermination complex active in many bacteria was designated N-utilization substance (Nus) in E. coli because of its interaction with phage lambda protein N. This model represents NusB. Other components are NusA and NusG. NusE is, in fact, ribosomal protein S10. [Transcription, Transcription factors].	1.18033e-44
NC_009767.1|WP_012121719.1|4210610_4212047_+|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	7.93125e-160
NC_009767.1|WP_083760329.1|4223822_4224101_-|hypothetical-protein	gnl|CDD|370721	pfam09821, AAA_assoc_C, C-terminal AAA-associated domain. This had been thought to be an ATPase domain of ABC-transporter proteins. However, only one member has any trans-membrane regions. It is associated with an upstream ATP-binding cassette family, pfam00005.	5.63199e-13
NC_009767.1|WP_012121727.1|4227304_4227763_+|transcriptional-repressor-NrdR	gnl|CDD|234774	PRK00464, nrdR, transcriptional repressor NrdR.	1.6205e-78
NC_009767.1|WP_012121728.1|4227778_4228672_+|restriction-endonuclease	gnl|CDD|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	2.0235e-08
NC_009767.1|WP_012121722.1|4216222_4218973_+|glycoside-hydrolase	gnl|CDD|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	1.57897e-26
NC_009767.1|WP_012121721.1|4214229_4215156_-|MBL-fold-metallo-hydrolase	gnl|CDD|293812	cd07726, ST1585-like_MBL-fold, uncharacterized subgroup which includes Sulfolobus tokodaii ST1585 protein; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Sulfolobus tokodaii ST1585 protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.78763e-92
NC_009767.1|WP_012121716.1|4207509_4208370_+|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.1144e-07
NC_009767.1|WP_012121715.1|4206662_4207502_+|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.00531e-13
NC_009767.1|WP_012121732.1|4230339_4230588_+|acyl-carrier-protein	gnl|CDD|179197	PRK00982, acpP, acyl carrier protein; Provisional.	3.37451e-32
NC_009767.1|WP_012121735.1|4232704_4233598_+|16S-rRNA-methyltransferase	gnl|CDD|336604	pfam07091, FmrO, Ribosomal RNA methyltransferase (FmrO). This family consists of several bacterial ribosomal RNA methyltransferase (aminoglycoside-resistance methyltransferase) proteins.	2.9334e-95
NC_009767.1|WP_012121730.1|4229516_4229867_+|Asp23/Gls24-family-envelope-stress-response-protein	gnl|CDD|377129	pfam03780, Asp23, Asp23 family, cell envelope-related function. The alkaline shock protein Asp23 was identified as an alkaline shock protein that was expressed in a sigmaB-dependent manner in Staphylococcus aureus. Following an alkaline shock Asp23 accumulates in the soluble protein fraction of the S. aureus cell. Asp23 is one of the most abundant proteins in the cytosolic protein fraction of stationary S. aureus cells, with a copy-number of >25000 per cell. A second Asp23-family protein, AmaP, which is encoded within the asp23-operon, is required to localize Asp23 to the cell membrane. The overall function for the family is thus a cell envelope-related one in Gram-positive bacteria.	1.67781e-08
NC_009767.1|WP_012121718.1|4209215_4210595_+|AAA-family-ATPase	gnl|CDD|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	1.13512e-10
NC_009767.1|WP_041330965.1|4213109_4213772_-|ComF-family-protein	gnl|CDD|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	5.72184e-48
NC_009767.1|WP_012121733.1|4230718_4231717_+|translocase	gnl|CDD|224739	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion].	6.18818e-12
NC_009767.1|WP_012121734.1|4231729_4232665_+|twin-arginine-translocase-subunit-TatC	gnl|CDD|376413	pfam00902, TatC, Sec-independent protein translocase protein (TatC). The bacterial Tat system has a remarkable ability to transport folded proteins even enzyme complexes across the cytoplasmic membrane. It is structurally and mechanistically similar to the Delta pH-driven thylakoidal protein import pathway. A functional Tat system or Delta pH-dependent pathway requires three integral membrane proteins: TatA/Tha4, TatB/Hcf106 and TatC/cpTatC. The TatC protein is essential for the function of both pathways. It might be involved in twin-arginine signal peptide recognition, protein translocation and proton translocation. Sequence analysis predicts that TatC contains six transmembrane helices (TMHs), and experimental data confirmed that N- and C-termini of TatC or cpTatC are exposed to the cytoplasmic or stromal face of the membrane. The cytoplasmic N-terminus and the first cytoplasmic loop region of the Escherichia coli TatC protein are essential for protein export. At least two TatC molecules co-exist within each Tat translocon.	8.46099e-56
NC_009767.1|WP_012121729.1|4228691_4229444_+|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl|CDD|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	1.05464e-130

Protein sequences

>NC_009767.1|WP_083760329.1|4223822_4224101_-|hypothetical-protein
MGVGCGVRRRPRLSARRAPLFRWRLSLLWSSQRQQLNRGVVQTALELAFPQEEAERQVEIAIQWGRYGEVLAHDDAEETFYLEPAETKSVTV
>NC_009767.1|WP_012121724.1|4222935_4223664_+|hypothetical-protein
MRTAAFHFRPALLPVALLPAGQNAPPAYAGNSAINSFASSVAASSLPGVRFVPMAAANNIVAHGAAVDRPLLNGNLNAIVLATQNWTPGGEGGISNNHAIGVWYDSAQNKRVVFNQDVAAMPAGARFNVMALNNLTAPPWSKAAFVHTATSGNTHDNRTALNHSLSNSAPPAFVFTTDNYNPGVVGGTYNNHHTGVWYTGVYDPVFPNRWAIFNQDNATMPTNTRFNVLVIVRRVCLPNVLR
>NC_009767.1|WP_012121722.1|4216222_4218973_+|glycoside-hydrolase
MLSYHMPLPGPWEFRFDDQSDWRPIAVPGCWEDAGFVKDRSGPAWYRTSFVIPHELEGRRLFLHFGAVSYHCEAFIVRDSGDMCSIGTHTGMWDAFDLEIGDAAAPGEHVTLLVRVEKPASLSDGPESASLPGRFPLRETLAGFLPYVWGHSHGGIWQEVALIACGATRFLDAWVHGAPDGHIFVEAELDGPARVTLELYRPDGSFILSAEEDAVRVETASGIRYRLHMDGPTSDARLWSPDDPALYRAVLRAGYDDRIELRFGLRSFDADGATLRLNGAPIYPRMILSWGWRWETFAPNPGPERVRADFERLKRMGYNGIKCCLWFPPRYYFDLADELGMLLWIELPMWLPRVTDHFRRQTPVEYERLVRQARRHPSVVLYSLGCELGKDVGADILGSLYAMTRSMCGDALVRDNSGSGEAYGGLLNEFAQYYDYHFYADLHFFRGLLDAFSPRWRPAQPWLFGEYCDYDTFRDLRRYRRADGSRPWWLSADLAINPTGARWTNEAPFLEERLRAQGLWERSAELEAFSYAHGLLHRKWTIETTRMYREVSGYVITGEADTPITSAGMWDATGALKYDPTEFRRFNNDLVALIGWDRRRDWVRGGDRAAFWDVWSYNAGTLVRPHVIVSHYGAQGGPARAAWSIAFDDEAPFASGDIVASHDVMPGDVREIGVAEFTAPDVSAPLRAMFRVSLNVGTQRTDNAWPIWFFPANPWATMRNVAIYDPLGRLRDLTRLAPQVVEVTHADLRSEAGARVDLHAAPFVVVASAWTRALSMYTRGGGRVVLLQDGDGPPGPVATAAMPFWREALRVCEPHPAWGDFPHDGWAGLQFFGCATDCALDTQPLDGLTRPILRRIDTRTTAVHDYAAEVVWGEGRLIVSTLRIYGGAGEQPSGIGRNTSAAYLLLCWVKYLGSKR
>NC_009767.1|WP_012121721.1|4214229_4215156_-|MBL-fold-metallo-hydrolase
MTDPRYGLPETIALIDDLHLGCSQVVGTYVMLGDDPVIVDPGPASVLPNLEAGLKQIGLSFSDLHGIALSHIHLDHAGATGSLVRYFPHLKVYVHHRGAPHMIAPDKLLRSATRIYGGQMDYLWGEFLPVPVDNIVTLGGGETLRIGGRALRVFDAPGHAAHHLIYFDESTGAAFVGDTTGLRMPGHTYVRPATPPPDIDLEAWRRTLDMLLSLNPRMLLLTHFGPAHDPERHIADMWDHVLRWAETVRVSLERGEEESAAEARLVALADADLGDVDEAMRRQYAQAGAVEMSWHGLARYWRKRMDAS
>NC_009767.1|WP_041330965.1|4213109_4213772_-|ComF-family-protein
MTLARLIDAFLSLVLPDRCAGCGRLGSVLCDECCRRLVGYDGDPPRVADQLTGVRIAYVFEGPLRHALHQLKYRRRRRVARPLGALLASYLRAHPLPCDALLPVPLHRERLAERGFNQAELLAREVAAGTGLPLIAGPLVRLRATKQQALLDVAGRIENVADAFMWRGPAPPARVVIVDDVLTTGATVNACAAALRAGGAREVYALALARSRGQAPLSHR
>NC_009767.1|WP_012121719.1|4210610_4212047_+|CpaF-family-protein
MSLLKRIGGSQPQSTSEPAVPVSAPAPSDAANHTPASRTAPSTVSSGSEMSQQRMLELSLWIVDRILSSLGNQQELKRSPEMERQLQEKFTLAYRQSGVNLTDDQTKHLYDMVMDELFGFGPIEPLLRDDSITEVMVNGPRAVYVEQKGKITLTQVRFANDEHVLKVIDRIIRPLGRRIDRKWPMVDARLPDGSRVNAIIPPCAIDGPSITIRKFAKKKLTVEDLIRFGSMTPEMAEFLRACVVSRLNIIVSGGTGSGKTTLLNVLSNFIPPDERIVTIEDSAELKLGQDHVVRLESKPPEIDGTGRVTINDLVINSLRMRPERIVIGECRGGETMAMLQAMNTGHDGSLSTLHANSPRDAIARMETMAMMAGMDMPLRVIREQIASAIDLIVQQTRLEDGSRKISYITEVQGMEGDVVVLQDIFLLHILGKTPEGKIISELRPTGTRPRFTARLEAHGFKLPPSIFGATVPGQKRPW
>NC_009767.1|WP_012121718.1|4209215_4210595_+|AAA-family-ATPase
MSFFSQQFADRQRAAASPASAAGGVAIPPEPASVEETGLSMGFLNDLVLKVVYFHGNITGQQIAEVTKLPFFGVLDKVLEFLKLEEYVDIVGAQGGFNERAFQYVIATKGRLKVHEVLDRSQYAGPAPVPLDQYIAMVHRQSVGDMVVDAKTVRQAFAHLVVSDRMLDRIGPAANSARSLFLYGPPGNGKTTIAEGIANMLGGNVLIPYAVEVDGQIIKLFDPLNHQVVEQPAAAPTHEPAVSFEGRPIVDSPLPDRRWLVCKRPRVMVGGELILEQLELIFDPIAKVYEAPYQMKANGGLFLIDDFGRQKCRPQDLLNRWIVPLEKKVDFLALQTGKKIQVPFDVLIVFSTNLSPQDLVDDAFLRRIRHKIEVPNPTPEEFRAIFQRVAKAKNIPYSDEGLRYLILERYKRDGRDLRSCHPRDLCDQILDEAKYRGIPPSMSRELLDRAYDAYFVKLS
>NC_009767.1|WP_012121717.1|4208526_4209219_+|hypothetical-protein
MEVRIDEKGKFFTPRITKDAVTAFVRTPDKVIIGSVYVRPGNRLTDELNGDPSAFLPITDARVYRADDESFLLQTSFLLAAYREILLIGEFDALATIRDVPWNTQAAEPTPLIRDGEDMGVHVNERGKYFTLRTPKDAVLCAVRGSDLAVLGYLYIRSDRRLKDELNDEQARYLPMTDARVFRVSDNKLLYHASFLLIGRQAIDMVAPIDSVTRASDVPWLPVRSAEGSA
>NC_009767.1|WP_012121716.1|4207509_4208370_+|tetratricopeptide-repeat-protein
MTLTRQDERFRLQRRLQNQAVELAVNSRWEEAVQVNEKLIGLAETTETYNRLGKAYFELGRLTEARDAYRNALRLTPNNRIARRNLERIEELLAKSASLSTVSLKAGRQLVDLRLFVTEVGKTALTSLIDVQRGPALAAIVTGEKVELRPEGRGVAVYDTSGALIGRIEPKLAQRLNELMAGGNRYIAAVAHIDGRQVRIIIRETYQAPSQRGRVSFPGKLSESALRGAFISGAQFDEFGEELLEEEEGAEVREDVDEEAFGGEDEELGLEEIEPDIGDDEDLIEE
>NC_009767.1|WP_012121715.1|4206662_4207502_+|CPBP-family-intramembrane-metalloprotease
MNTLDVPASRLPMRVTPLAAIGALIADLLIALGAALALSGAVVGAILVLRAAQSGLELGAIGQLNGQDITRLIGADGMVALLLLQNLVFIGVAVVRVRVLRREPLSVLGFSAPQPFRLVFLGVGLGLLALLLNGIVGVLFVSAGIRQNQAALYPLFPGDYAGQALFFIGAVVLAPIGEEVLFRGYLFGSLRRLAGDSRAGIAVAYGVSALVFALSHSLAATEGLIGLLVPSFLIGLVFAWGFDRSGSLIPAIVAHAINNGIAFAALLTCVNNPGMCPQM
>NC_009767.1|WP_157042682.1|4225523_4225796_-|hypothetical-protein
MKFHLVPQHIRDQDAHRDMFGSSASRDETRLGYRLSSVVTLGGVILELTSANVDERESALGNKGNVSASLAAQLRYEGVKLIMLPRDNRC
>NC_009767.1|WP_012121727.1|4227304_4227763_+|transcriptional-repressor-NrdR
MRCPYCQHPDSDVIDTRKLHNGETIRRRRKCEACGRRFTTYERVETVSITVVKKNGEREPYEREKLMRGVRTACYRRPVPAQALESLANDIEAELMALDEPEVPSSLIGDMVMRRLRTIDDVAYIRFASVYRSFADIGKLREAVDELLEQGR
>NC_009767.1|WP_012121728.1|4227778_4228672_+|restriction-endonuclease
MSIDVSDQPQTTPQEERRANPVARFFGEIRAGLREIRWIIVLLYAIAGGLLMPLSLTAGGIAGFLAGIVPVGVGLLLARNVPGHYALHGFLTGALASVVAAGMLWYFIFQTQFGVSGAGMVEPGTPPWDAWLVLSGFFGFSLIVFCTFGASTAGRIEERNRALRDEIKQRGGALERPSAIREPDDIRGLSLPQLGYYVNNLFKKQGFTFKDYRFLHKDKYLDIWLEYKDEPWHLRLSVADKVAPGAIESLLQEMKREGCTKGVVITSTEFTPAAIKAAKDRPVALIDGATLYQIAEK
>NC_009767.1|WP_012121729.1|4228691_4229444_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MQISLKGKIAVVTGGSRGIGRAIATTLAAAGATVVVNYQRNAAAAEETVAAITAADGAAISMQADVSAAEEVERLFKTVIERYGTVDILVNNAGITRDTLLLRMKEDDFDAVIDTNLRGVYLCTKAALRPMTKARSGRIINITSVVGLIGNAGQSNYAAAKAGIIGFTRAVAREMASRNITVNAVAPGYIETELTAGLGDQVRTAILEAIPLGRLGTPQDVANLVCFLASDAAAYITGQTLTVDGGMVMS
>NC_009767.1|WP_012121730.1|4229516_4229867_+|Asp23/Gls24-family-envelope-stress-response-protein
MSQSLGHVTVAAPVLLALVRAALRETPGVVRLAHAPSVQGETPVFAGPGAAIAIGATGVHVTCAIVVARGARLAQVAATAQAAVATALRELAGVDVAAVDVSIADVAAIEKTRDHG
>NC_009767.1|WP_012121731.1|4229859_4230288_+|transcription-antitermination-factor-NusB
MASLRHRVRAIALQILFELDATDHPPDQVVGRRLEEEQLPPEGERFLRRLVFGAWEHAAHLDRIIEEAAPNWPVSQMPGVDKAILRIALFEALIDKEEKTPLKAIINEAVELAKQYGSDNSSRFVNGVLGTVVSRYRERSKG
>NC_009767.1|WP_012121732.1|4230339_4230588_+|acyl-carrier-protein
MPSPEMEARLKQIVAEQLGVDESKIVPTARFTEDLNADSLDLVEMIMELEEAFGVEIPDEDAEKIITVQDALNYIEQKLQAA
>NC_009767.1|WP_012121733.1|4230718_4231717_+|translocase
MELLGVGPGEILLILVIMLLVFGPERLPEFARQAGRFVVRVRDWIQRSPDAAMVLRARAELESELQAIRAELTREVESVRQDLQSVRSDLADAGKLIEQSAQEAASASTIDLPDGTGKEIPSLNPPTPATPGQSPATVSPGADNAAVPVVPHADSMAAPVVQHADGMATPVVPAGDGAAMPEFEVDPGPIGARRARIAEVSAAQTPAEPSRTPVIAGGETVARGARSEPVPSRTRVVAEDSPFAADMARIDDLSRQVSMIAEELARLRVTLLQRMAEEKRRRDHVDAIANETLAPLNGTDSAASLSNGAASDSDLAPADDAQADLRRVESSS
>NC_009767.1|WP_012121734.1|4231729_4232665_+|twin-arginine-translocase-subunit-TatC
MEFTSTQLIVVVSVLTALILLPLVVILLVRLFIKDEAPTDGEEVVSNLTEFNSIGDVWRAFVPHLVELRDRMVKALIAVAIGTMIGFWIVNSPILLGDPLPVFLVRHLAPPGTQLQGIDTGEVFFAYMRMALVVGITLAMPFVLYQIVAFFLPGLLPNEKRILFIALPFVTELFIAGVAFGWFFTVPAALGFLLGFGVDGTTIITQPRVDSFIGTVATLLLWNGLIFQLPAIVYVLARLGVVTAARLAATRRYAIVIIFIIAAFITPTGDPYNLLLLAIPMYLLYELGIILARFVPKRHTDEGQATAASTG
>NC_009767.1|WP_012121735.1|4232704_4233598_+|16S-rRNA-methyltransferase
MASAESPQIDEVVAAVLAAPKYRMIAPSLVRTLAMRELAARRNVKAAIKATKNKLHQIVGAYVEQRIDVADWVRQLQAHEVPSPTTVSEDALIQAALANSHGAHLGASFIRASLDLMARHASTRERLPIVHRFYAEILADLPPIRSVLDVGCGLNPLAIPWMPLAPDVVYHASDIDRTIVAFIAQYLALAGIAGSVEVRDQAAHPGGPPVDLALALKLLPVLEQIERGVAARVLDALDAPFVLVSYPVQTLGGRRKGMGATYERQMEALVTEREWEVQRFVFPGELAFLIRKGSRQS

Crispr_ID: NC_009767_82

• CRISPR_ID: NC_009767_82
• CRISPR_location: 4297314-4312795
• Repeat_type: NA
• Spacer_info: 213 spacers
• Cas_protein_info: cas4,cas2,cas1,cas6,cas3,cas5,cas7,cas8b2,csx3,csx1

Consensus repeat of NC_009767_82

Consensus_repeat	Method
ATTTCAGTGCTCTTCTGCGAGCCGAAAAATCGGAAA	PILER-CR
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CRISPRCasFinder
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CRT
ATTTCAGTGCTCTTCTGCGAGCCGAAAAATCGGAAA	PILER-CR

spacers of NC_009767_82

>82.1|4297350|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AATGATTGAACCAATCCGCCGCCTGGGCCAGCCAG
>82.2|4297421|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATATTTCGAATTCGACTAACCCGTACCAGTGTCCAGC
>82.3|4297494|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCAACATATCTGAGACCGGGGGGGAATATTGCAGG
>82.4|4297565|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCCATAGGTACTCCTCTGACCTATGACCGGCGTCAC
>82.5|4297637|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GGACGCAAGCGGTCTTATCCAGGCGCTTGCAGATTC
>82.6|4297709|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GAGCACTGGGCGGATAACCCGGCGCTGCGTCCTGCGC
>82.7|4297782|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TACGTGATCAGGTTGTGTGTTAATTATTACTGGATTAAC
>82.8|4297857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTCGCGACCGCGCCGACCGGACGCCAGCGCACCGCT
>82.9|4297929|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGCGACGGACCGCGCGGCGCGCGGCGAACACGGCATC
>82.10|4298002|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTCTCAAGGGCAACCAGTTTGTCAACCATATCGCGG
>82.11|4298074|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGTCCGGGTTGACGCCTTCCTCACTGAAATGCAGG
>82.12|4298145|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGGACAGCACCGCAGGCAGCAAGACGCCCAGCAGGC
>82.13|4298217|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CAGATCAACGAGTGGATATTGGTACTGTATATAACCGC
>82.14|4298291|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTGCGCTTGGCAAGAGCCTCTACACGCACGGCGCAC
>82.15|4298363|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTGCGTTCCCACAAGGTCGCCGTCGAAGACGGCGAC
>82.16|4298435|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCCAGCGCCGTGTCGCCCGGCTCGGGGGTTATCGAAC
>82.17|4298508|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GGGGTTGGGGTTAAGAGGGGCCCACGACAGGACGCGA
>82.18|4298581|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTTGATTTGCCGGGCCCGGAAAGCGGGGCGTATGCAC
>82.19|4298654|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGCAGAGCACTGGGCGGACAACCCGGCGCTGAGGC
>82.20|4298725|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGCGAAAGGGGGGGGGATTGGGGCAGTATGGTTAAC
>82.21|4298797|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGACGCGGAGACGGTCGAGGAGGCGGTCGAGGAGGC
>82.22|4298870|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ACCGCTCCCTCGCTTGCGTAGACGAACAACGTGCGCC
>82.23|4298943|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AACGCCGCGCCGCGCTCCTCATCAACAGCGCGCTCGC
>82.24|4299016|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCAATGCTTACATCGATCTGGAACCGACCCGGATAAC
>82.25|4299089|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATAGCGATGAAGGGGGGGATAACCTTCCCTTCTTTTC
>82.26|4299162|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCCGTCCGCACGAGCGACATCGCGCGCGACGTGATC
>82.27|4299234|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGTGGTGCCACGGCGCAGTCAACGACATGCGTCGAC
>82.28|4299306|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGCTCGGCGTCGACGTGCTGCTCAATTACGCCGGC
>82.29|4299377|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGACAACACCGCGTCGCAGCAGTTCTTCCGCTACC
>82.30|4299449|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AAATTCGGCATCACGAACCTCCTCATCAACAAAAGA
>82.31|4299521|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCGCGACTGACAGCAGCCCCATCGCCACGTTCACCG
>82.32|4299593|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCCGGGTTCGTCCTTCTGGGCGCGTGGCGCGGCGCTC
>82.33|4299666|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCCCGCTAGTACTTTAGTACCACACACACACCACCACC
>82.34|4299740|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCCTCGCTCTACGACGGCGAGGACGGGCTGGCAGCC
>82.35|4299812|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATGTGAATATGCCCGCCGATTGACCGGTAAGGATAG
>82.36|4299884|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTTTTGCGGCGCGCCAGCGCACCCAGTCGCCGAACG
>82.37|4299956|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGTCCAAACGTTCGTATCCTCAACCCAATCGCCGCCGC
>82.38|4300030|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCAAAAGACGCCGGGCGTGTTCTACGCCCGCGCCGGC
>82.39|4300103|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCCGCGGCGGCGGCGGCGATGCTCATCACGCGATG
>82.40|4300174|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GATGTCATAAACGAGCACGAATTTCTCGACACGCGGGTC
>82.41|4300249|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGACTGCGGTCAACAGCGGCTCATCGCGCATTCGGC
>82.42|4300321|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATCTGCTCATCGACCTGGGCGAGGTGACGCTGCCGCC
>82.43|4300394|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCTCGTCGTTGTAAACAGAAACCGAGACCAACGTA
>82.44|4300465|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTGTTCGACGCCGCGCGCGGGCTGTCGGGCTTTGA
>82.45|4300536|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCTGAACCTCGCCAGGAATATCGACGCCGCCAAACTC
>82.46|4300609|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CAGACATGTGCAGCGTCAATGGAGTGACGCACGCAC
>82.47|4300681|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGCTGCATTTGTAAAAAACGGGGAGTTTAGTCCTGA
>82.48|4300753|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AAAAAGGCCTCTGGGAGCCATTATAAGGCGCGAAAA
>82.49|4300825|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCTTATGCTCGACATCGTAAGCGCGCCGCTGCCGAC
>82.50|4300897|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CAAAACCTGCAACGGCGAACAACATCGCATCCATCAC
>82.51|4300970|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CATCATGGATGAGTCGACGATGAGTCGCACGATAAGC
>82.52|4301043|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCGTCAGCGCGGTGAGCGCAGGCAGCGCCAGGCTGCCG
>82.53|4301117|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCTGGTATCGTCACGGTGCTAAACCGGCGAGGATTGGC
>82.54|4301191|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGTCTACACGACAGGTACTCGGGAGTTTATCGAGGCC
>82.55|4301264|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GGCTCGATGTACTTGCCAGCGGGCGACGATCAAATTGGC
>82.56|4301339|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTGATCTCATTCCTTGTCAGACCAACAACACTGCGT
>82.57|4301411|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTCTGGACGATCGATGCGGGAATGTTAGCAAGCACG
>82.58|4301483|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGGTCTTTGTGGCGGTCAAGCGGGCGATTGGACGC
>82.59|4301555|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTGTCACTGATGAGACGCTCATCAGTAACCGCAGC
>82.60|4301626|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GATGACATGGAACGGCGTTCGCGGTTGGAGCGCCTG
>82.61|4301698|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGCGTGCATGAAGGCGTCTTGGCCTGAAGACGCTCAC
>82.62|4301771|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AAACTCGCGCGCGCGGGCGAGGAGGGGGTCGTCGGA
>82.63|4301843|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGAAGGTATACGTAACGGTATAAACTGGTGACGGAC
>82.64|4301915|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GATGGAAGATCGAGGGAATCGAATTCGCGTCGCCGGC
>82.65|4301988|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CACGCATTCACACGCGTCCGCCTACAGGCATATACACC
>82.66|4302062|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGCGCGCGCGCGAGTACTGCTTCCACCGCCGGACCC
>82.67|4302135|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGTTCGGCGCGTGATGAGTTGATTACGCGCTCAA
>82.68|4302205|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCAGGGAGGGCATGAGATCGGCAAGCGCATCGTGCGC
>82.69|4302278|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTCAGAGCCTTGTCCAATTCCAAGGCGACTTCCGC
>82.70|4302349|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCTGGTCGAACTTTGTGGGTAGGAGGCACTAAACCGC
>82.71|4302422|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CACCTTTACTGAATAATACATGTTGACAAGAATGTCATC
>82.72|4302497|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTGACGTGCGTGTCCGGCGTCTCACGCGACGCTGCT
>82.73|4302569|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGACCGCGCGCGCGCGGCGGTTAAGCACAAATGC
>82.74|4302640|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCAGGACGGTCACCAGCGCTGGAGCATCGACGTAGC
>82.75|4302712|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CAGATTACACTAATGTACAATTTACATCTATCCTTC
>82.76|4302784|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCATATCTCTTATATTCCTGACGTGATAATCATACCC
>82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ACCAACGACGCCGAAGCGCCGGCGGTTATGGTGCGC
>82.78|4302929|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTTATGCCTTATGAGGAGGACAAAAATGTGACTCTTC
>82.79|4303002|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GGCGCAATACACGGCGCCTTGGTAATTGTTGAAAAAC
>82.80|4303075|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TAAGTACGGTCGTCAATAGTACTTCCGGCGTGCCAA
>82.81|4303147|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CAAAAGTACAAAACTTCTTCTCACCGAAAAAATCGAAC
>82.82|4303221|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCTGGGTGATGCGGGGCAAGCTGTTGAATCGTTGG
>82.83|4303292|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCGTCGTGGTGCGGGTACAGTCCAAGCAATCCGTC
>82.84|4303363|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCATTAAGCGCTCTATTTTTGCATCGAAAATAGTCGC
>82.85|4303436|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTTACAGTCAATTGACAATATTACAGGCGATTGGTC
>82.86|4303508|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGGGATCGTATGCGTGGTACTACAAAGGGCCCGCGC
>82.87|4303581|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCTTACCCCGCCAATAATGCAGCGCCGGACCATCCGC
>82.88|4303654|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTCTAGTTTGATGATGAGCGACTGCGCGTCTTAGC
>82.89|4303725|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTATATGACTTGTACAGGCGAACAGTGTACACCTCA
>82.90|4303797|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCAATCGTATATATCTTATATTCCTAACGTGATAATC
>82.91|4303870|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTCGCGACTTGACGCGCGACCTGATGCTCTGGGG
>82.92|4303940|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AGAAGTTTTGTTTTGGCGGGAAAACTGTGGTTTTACAATC
>82.93|4304016|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGGCAGGAACAGCGCGCCAGCCTTCGAGCTCCGTGTA
>82.94|4304089|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGCCCAAAAAAAACCGGCGACACGCTTCCATTGTG
>82.95|4304160|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGGTGCAGTCTCTGGACTCCATCCAGGCGCTGCGTGG
>82.96|4304233|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGATAATACGCCTGATAATACGTTGTTGCATGCGA
>82.97|4304304|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTTCCGCGGTTTTGCGTACTTCCGCGTACTCCGGCGT
>82.98|4304377|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGGCAGATCCATGTCTTGCACGTTGACCGACCAG
>82.99|4304448|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTTCCGACGCCGACGCCGGAGTACGCAGAAATTCGC
>82.100|4304520|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATGTGACGGTCTGCGATATGTTTCAGGGCAACATAC
>82.101|4304592|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTGCCATTCCGCACGAAGGAAGGAATACCGCTGCGA
>82.102|4304664|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCGATCCGAGCGTGCTCTATTTACCGTGTTTTCGAG
>82.103|4304736|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATTCTGATTTCGACGCTCTCTTGTGGCTTCAACCAC
>82.104|4304808|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCTCTCACCACCATTTTCGCTATGTCGGCATCGGC
>82.105|4304879|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCATTCCCTGATGGAGGACGGCATGGATTGGATAA
>82.106|4304950|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGAGCGCCGACGGGCGCTGGTGGTCAGCGCGCTGC
>82.107|4305021|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGAACAAAACTTTGGTCGATACCGGCCACTTTTTTC
>82.108|4305093|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AAAGTTCAATACCTGGAAAAACTTTACCTCGCAAA
>82.109|4305164|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATTCGTAGTCCGGTTATCTGCTGGTCCTTATCGAACC
>82.110|4305237|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ACAATCTCGACGTAGCACAGTCGCCAACCCGGGTTA
>82.111|4305309|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCCGAAGTGGTATGGACAGACCCCGACATATGCTCG
>82.112|4305381|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTTGTACCCGCTGACAGTATTCCCCCCCCGTTTCAC
>82.113|4305453|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTCGCTCCCTCTCCAACGCCGCCGGATTGACCTAAA
>82.114|4305525|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGAAACGAATGTCGCTTTCGCCGCGAATGTCTCATCC
>82.115|4305598|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCGGTCAAGCGCACCGTCAGGCAGCACCAAGCCTGAC
>82.116|4305671|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCGATCCAGAGCGTTCTCCAACTCGTAAGGTTGTAAG
>82.117|4305744|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGCTTTTCGCCGCGTTCAGCGCGCTGCGCACGGCGT
>82.118|4305816|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGACTGTCATATGGGGATGCCGGTACATCGAGTGAC
>82.119|4305888|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGAGCATCAGCACTGGCGGGGTTGTTGGACACGGCAAGC
>82.120|4305964|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCCTGCCGCCAAAACGCTTGCGCGGCAGGCTGGAAC
>82.121|4306036|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTGACTATCTTGTTGCAACGTATCCTTATGGGGAA
>82.122|4306107|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTTCCCTTTCGAAATTGCTCGATAGAGAAGAATCGCAC
>82.123|4306181|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGCTATCGAGCATCTCTCCAGAACGTCGTCCGGTATCAC
>82.124|4306256|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ACAAGCGCAGGAAGTCAATCCATTGACCGCCGCCC
>82.125|4306327|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATGAACTCACCCGCACCGGACACCCAATCGCGGAGCC
>82.126|4306400|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCCTGAAGGAAAGAAGCATTCTGTACGACCTAGTTG
>82.127|4306472|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCCGAGGGCGTCGGCGTCGAGGATTGCGCGGAGACC
>82.128|4306544|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ATCAGTACTGTGGCCGGTTTCCTGGCGCTAGCGCCA
>82.129|4306616|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCTTCGTGGGCGACGCAAAGGCGAGCAAACTCACGCG
>82.130|4306689|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGTTACACTTCATACTCGGAGACTGGCTTCCGCCACC
>82.131|4306762|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT
AGACGACAACCGCGCCGCGCAGCGCCTGGACGGA
>82.132|4306832|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCATGCCTGTTGCTACTACCATTGCCCTATTAGCG
>82.133|4306903|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTCGACGACCTGCGGCGGCATCTTCTCCAGCGCCTG
>82.134|4306975|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCGTCGGAAGTTGCGCGAAGGGAAGTCGGCGCGATGATC
>82.135|4307050|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTCGCAATCGCGCTCCACGCCGCAGACGCAGCGTTT
>82.136|4307122|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCGATTGTGCGGCAGTTCCCGACGCCGCCATCGCTGCGC
>82.137|4307197|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCATCAACCATCACAGACGCTCTCACCATCCGATACC
>82.138|4307270|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GTCGAACATGTGCCGCGTCCCGTCATCATCGAAAT
>82.139|4307341|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCGACGCATGCGACGCTTGCGTGAGAAACGTGACATCC
>82.140|4307415|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTCGTCAGCGCCTTCATCAACCATCACAGACGCTCTC
>82.141|4307488|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCAAGCGTCGCGCACAAAACAGTTCGTAATCCGAACG
>82.142|4307561|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCGCCGGTCGGGTGCTCGATATTGCCTTGTTGCGCCGAC
>82.143|4307636|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TTCGGCATCTGTGAGGAGGGGGCGCGAAAGGAGGCTT
>82.144|4307709|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCTTCCCGGCTTCCCGGCGCCGGTTCCGGCTGCCGGT
>82.145|4307782|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TATTGCAATCGCATCGGTCGCGTCGTCGGCGATTGC
>82.146|4307854|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCGATCAGTTTTGTCAAGACTTCTCGATATGCCGGA
>82.147|4307926|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TCCGTTTTTCGTCTTGTCGTCTCATGTTGTCACC
>82.148|4307996|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCACATCGCGGATAAGCGCGTAGAGCGTTATATGCA
>82.149|4308068|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGGGTGTTGTATGCTTGACTATGCGCGCGTTCGATGC
>82.150|4308141|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCGGTCGGTCTTGTCGCGCGGCGCTGCGCATCGTA
>82.151|4308212|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGCAGCGCCTGGATGTCATCCAGCGAGCGCAACAC
>82.152|4308283|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTCAACCGCGCGCCGGAGATCGCTGAACAACTCCTC
>82.153|4308355|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGCTCAATGCTGCTGGCGCCATTGCGAGGATGATTGC
>82.154|4308428|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGAGATCGCGCGTCGGATTGGATGCTCGCATATCAC
>82.155|4308500|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CCGGTGTGCTATGAGCGTGATGTTCCGGGCGACGAC
>82.156|4308572|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
ACAAACGCAGGAAGTCAATCCATTGACCACCGCCGA
>82.157|4308644|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CGCAGCGTGACGGCGTGGGGGGTCAGATTTACCAG
>82.158|4308715|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGGTCGTCTCCGTCGCCGCTCCCGCCCTCCCCGGAC
>82.159|4308787|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT
CTACGAGTCAAATAATCGACACAATCACGCCGCGTCATC
>82.160|4308862|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT
GCGTATGACTGGCGCCTGAACGCGAGTAGTTGATTCC
>82.161|4308935|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT
TGTCCAGCCATGCCAGCCTTCTTTCCACCCAGTCTC
>82.162|4309007|35|NC_009767|CRISPRCasFinder,CRT
ATGAAGGTAAGTACGGCGGAGCGTATGGATTGACT
>82.163|4309078|34|NC_009767|CRISPRCasFinder,CRT
CGCGCTCGATAACCACGCGCGCGCGCGCGTCGTC
>82.164|4309148|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GTCATACTCATCAACGCTGATCCCCATCAACACGTTGC
>82.165|4309222|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCTCTCGCTCACGTCGAGCGCGATACATGTCGAATC
>82.166|4309294|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TCGTAATTGATCGCTTCGCTCAGCATCCGATAGTGAT
>82.167|4309367|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GCGTAGTAACACGGTAGCAGCGTACTGTGTTCATCGTC
>82.168|4309441|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CTGTACGTGGTGTCAGCAACAAGACAGTGCCACTTTC
>82.169|4309514|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ATGTCGACAAAAATCAGCGCATCAACCTGTATTAC
>82.170|4309585|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TTTTCGAGCGAAACAAGCTTATCAACCATATCGCGGC
>82.171|4309658|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TTTTGACCGAGCAAAAAGTTTACAGAGTCAATTAAC
>82.172|4309730|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCGAGAATCAGGGCGTTATTGTAATTCAATCCCGAC
>82.173|4309802|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ATGAACTCACCCGCACCGGACACCCAATCGCGGAGCC
>82.174|4309875|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CTTTACCACAAGACATAACACAAATATCCTTTGTAGC
>82.175|4309948|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TGTTAAACAACGTGCATTGGTTTAGAAGGACTGGTAAAC
>82.176|4310023|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TGTACAAACCTGGCAATCGGTGTAAACGGGTTGAA
>82.177|4310094|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GATTGTCTTGCGTGTCGCTCCACGAGACCTGACTCGC
>82.178|4310167|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TGCAGGTTTCGGGAAATTATCAGGAGGAACGGTAGCC
>82.179|4310240|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CGGAAGGGATGTCATCTTCTCCTTGGTCGATAGAA
>82.180|4310311|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ATCTCATCGCCAATCGATCGCTCTCGCCGCAAGTGGC
>82.181|4310384|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ACGGTTCGGGTTACAACAAGCGCCCCGGCGAGTTTGC
>82.182|4310457|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GGCGTTACGCGCCGCCGAGCGTTGCGCGCCGCGCACTC
>82.183|4310531|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CTTCAGATCGAGACGCCTCCAAAAGTTTTTTCTTTC
>82.184|4310603|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CAAGATTGTCGCCAATTCGCCTGTCTGCTCTGTGTG
>82.185|4310675|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CATGGACAACCACGCGCCAACCCCGATCGGTGGTCGTC
>82.186|4310749|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CCGTACTTACCTTCATTGGTGTACGGCGGCGAGATGC
>82.187|4310822|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TCTGTCCGAGACGGTTCACAATCGGTTCGATTTTGCC
>82.188|4310895|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CTAAGAGCATACGAAAAGAAGTTACTGCTATAAAGA
>82.189|4310967|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TGAAACTCAAGGGTGGGTCGCACCGATGTTTCCTGC
>82.190|4311039|34|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TCCCTTTTTCCTTGATCCAAACCTCGATGTCCGC
>82.191|4311109|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ACCCTAAGATTTTCTTCTTGTTGTTTTACGACAACA
>82.192|4311181|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
AATACTATTTGAGCGTAGCAATGCGCATGCTTGCACC
>82.193|4311254|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ACGTCATGGCGCGCCGCCAAAAAGCCGCGCTAACGC
>82.194|4311326|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR
AGGTCGAGCGCGAGTTGCCTCACGTCCTCAAGTGA
>82.195|4311397|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TTCCGCCCGCGCTGGCGCGCCACGCGCGGGCGACGGCC
>82.196|4311471|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CGGTGCTGTTGTAGCGTCGTGACGGTGCGATTTTCTCGC
>82.197|4311546|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TTCCCGATTCGTGGTGGTCGTATGGATGGGATGAC
>82.198|4311617|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CGCGGGGTGCTCAAAAACCACGCAGAGCCCCGCTCGTG
>82.199|4311691|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CACAGGCGGCGGCGGACACAGCGATGCGTTGATGGCGCG
>82.200|4311766|41|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CTTTGTGATGCCGGTATCGGCGCGACAAATGTCTGATTACG
>82.201|4311843|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ACAATTATTCCTTCGGCCGAGCGTTTGCGTTCAAAG
>82.202|4311915|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ATTTATTGCGCGACGCGCAGACACGCGGCTTGATTGAG
>82.203|4311989|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CTCGTAGAGCTCGGAATGACACGCAAGGATTGCATTCAG
>82.204|4312064|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TATGACGGCGACCCCGGCTGGTATTGCCGTGACGG
>82.205|4312135|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ATCAGATCGTTGAGCCTGGGGAAGAGTACATCATAGG
>82.206|4312208|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ATACAGTAGATCATGCTGTCTGCTTGACTATGTGCGG
>82.207|4312281|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
CGGCAAAACAGATCGCGCTCGCGCGCCCGCGCGCGGG
>82.208|4312354|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ATTTCAGAGAGGGCCATCCTTTCAATTACGTCGCCGGG
>82.209|4312428|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
ATCAATGACCTATTCTCACCATCTTGCACCCGCGCAAGG
>82.210|4312503|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TGGTTGGTCGCTGGGGGTGGAGCGTCACGCCGCCGG
>82.211|4312575|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR
GTTATCAGAGCAGAAGATCGTTTCGCTCATCGATACG
>82.212|4312648|39|NC_009767|CRISPRCasFinder,CRT,PILER-CR
TCAGGGAACGCGGGAATAAGCGCGCGACAAGCGCCAAAG
>82.213|4312723|37|NC_009767|CRISPRCasFinder,CRT
AGGTCGCAATTGGACCGCCGTCAATATGCAAAACGTG

CRISPR arrays and Neighbor proteins around NC_009767_82

CRISPR arrays

The CRISPR arrays of NC_009767_82

>merge|NC_009767|82|4297314-4312795|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAATGATTGAACCAATCCGCCGCCTGGGCCAGCCAGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATATTTCGAATTCGACTAACCCGTACCAGTGTCCAGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCAACATATCTGAGACCGGGGGGGAATATTGCAGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCCATAGGTACTCCTCTGACCTATGACCGGCGTCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGGACGCAAGCGGTCTTATCCAGGCGCTTGCAGATTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGAGCACTGGGCGGATAACCCGGCGCTGCGTCCTGCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTACGTGATCAGGTTGTGTGTTAATTATTACTGGATTAACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTCGCGACCGCGCCGACCGGACGCCAGCGCACCGCTTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCGACGGACCGCGCGGCGCGCGGCGAACACGGCATCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTCTCAAGGGCAACCAGTTTGTCAACCATATCGCGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGTCCGGGTTGACGCCTTCCTCACTGAAATGCAGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGGACAGCACCGCAGGCAGCAAGACGCCCAGCAGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCAGATCAACGAGTGGATATTGGTACTGTATATAACCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTGCGCTTGGCAAGAGCCTCTACACGCACGGCGCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTGCGTTCCCACAAGGTCGCCGTCGAAGACGGCGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCCAGCGCCGTGTCGCCCGGCTCGGGGGTTATCGAACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGGGGTTGGGGTTAAGAGGGGCCCACGACAGGACGCGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTTGATTTGCCGGGCCCGGAAAGCGGGGCGTATGCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCAGAGCACTGGGCGGACAACCCGGCGCTGAGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCGAAAGGGGGGGGGATTGGGGCAGTATGGTTAACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCGACGCGGAGACGGTCGAGGAGGCGGTCGAGGAGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATACCGCTCCCTCGCTTGCGTAGACGAACAACGTGCGCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAACGCCGCGCCGCGCTCCTCATCAACAGCGCGCTCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCAATGCTTACATCGATCTGGAACCGACCCGGATAACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATAGCGATGAAGGGGGGGATAACCTTCCCTTCTTTTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCCGTCCGCACGAGCGACATCGCGCGCGACGTGATCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGTGGTGCCACGGCGCAGTCAACGACATGCGTCGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCTCGGCGTCGACGTGCTGCTCAATTACGCCGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCGACAACACCGCGTCGCAGCAGTTCTTCCGCTACCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAAATTCGGCATCACGAACCTCCTCATCAACAAAAGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCGCGACTGACAGCAGCCCCATCGCCACGTTCACCGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCCGGGTTCGTCCTTCTGGGCGCGTGGCGCGGCGCTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCCCGCTAGTACTTTAGTACCACACACACACCACCACCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCCTCGCTCTACGACGGCGAGGACGGGCTGGCAGCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATGTGAATATGCCCGCCGATTGACCGGTAAGGATAGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTTTTGCGGCGCGCCAGCGCACCCAGTCGCCGAACGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGTCCAAACGTTCGTATCCTCAACCCAATCGCCGCCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCAAAAGACGCCGGGCGTGTTCTACGCCCGCGCCGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCCGCGGCGGCGGCGGCGATGCTCATCACGCGATGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGATGTCATAAACGAGCACGAATTTCTCGACACGCGGGTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGACTGCGGTCAACAGCGGCTCATCGCGCATTCGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATCTGCTCATCGACCTGGGCGAGGTGACGCTGCCGCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCTCGTCGTTGTAAACAGAAACCGAGACCAACGTATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGTGTTCGACGCCGCGCGCGGGCTGTCGGGCTTTGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCTGAACCTCGCCAGGAATATCGACGCCGCCAAACTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCAGACATGTGCAGCGTCAATGGAGTGACGCACGCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGCTGCATTTGTAAAAAACGGGGAGTTTAGTCCTGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAAAAAGGCCTCTGGGAGCCATTATAAGGCGCGAAAATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCTTATGCTCGACATCGTAAGCGCGCCGCTGCCGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCAAAACCTGCAACGGCGAACAACATCGCATCCATCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCATCATGGATGAGTCGACGATGAGTCGCACGATAAGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCGTCAGCGCGGTGAGCGCAGGCAGCGCCAGGCTGCCGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCTGGTATCGTCACGGTGCTAAACCGGCGAGGATTGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGTCTACACGACAGGTACTCGGGAGTTTATCGAGGCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGGCTCGATGTACTTGCCAGCGGGCGACGATCAAATTGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTGATCTCATTCCTTGTCAGACCAACAACACTGCGTTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGTCTGGACGATCGATGCGGGAATGTTAGCAAGCACGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCGGTCTTTGTGGCGGTCAAGCGGGCGATTGGACGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTGTCACTGATGAGACGCTCATCAGTAACCGCAGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGATGACATGGAACGGCGTTCGCGGTTGGAGCGCCTGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGCGTGCATGAAGGCGTCTTGGCCTGAAGACGCTCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAAACTCGCGCGCGCGGGCGAGGAGGGGGTCGTCGGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGAAGGTATACGTAACGGTATAAACTGGTGACGGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGATGGAAGATCGAGGGAATCGAATTCGCGTCGCCGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCACGCATTCACACGCGTCCGCCTACAGGCATATACACCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCGCGCGCGCGCGAGTACTGCTTCCACCGCCGGACCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGTTCGGCGCGTGATGAGTTGATTACGCGCTCAATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCAGGGAGGGCATGAGATCGGCAAGCGCATCGTGCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTCAGAGCCTTGTCCAATTCCAAGGCGACTTCCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCTGGTCGAACTTTGTGGGTAGGAGGCACTAAACCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCACCTTTACTGAATAATACATGTTGACAAGAATGTCATCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTGACGTGCGTGTCCGGCGTCTCACGCGACGCTGCTTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCGACCGCGCGCGCGCGGCGGTTAAGCACAAATGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCAGGACGGTCACCAGCGCTGGAGCATCGACGTAGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCAGATTACACTAATGTACAATTTACATCTATCCTTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCATATCTCTTATATTCCTGACGTGATAATCATACCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATACCAACGACGCCGAAGCGCCGGCGGTTATGGTGCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTTATGCCTTATGAGGAGGACAAAAATGTGACTCTTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGGCGCAATACACGGCGCCTTGGTAATTGTTGAAAAACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTAAGTACGGTCGTCAATAGTACTTCCGGCGTGCCAATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCAAAAGTACAAAACTTCTTCTCACCGAAAAAATCGAACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCTGGGTGATGCGGGGCAAGCTGTTGAATCGTTGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCGTCGTGGTGCGGGTACAGTCCAAGCAATCCGTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCATTAAGCGCTCTATTTTTGCATCGAAAATAGTCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTTACAGTCAATTGACAATATTACAGGCGATTGGTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCGGGATCGTATGCGTGGTACTACAAAGGGCCCGCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCTTACCCCGCCAATAATGCAGCGCCGGACCATCCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTCTAGTTTGATGATGAGCGACTGCGCGTCTTAGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGTATATGACTTGTACAGGCGAACAGTGTACACCTCATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCAATCGTATATATCTTATATTCCTAACGTGATAATCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTCGCGACTTGACGCGCGACCTGATGCTCTGGGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAGAAGTTTTGTTTTGGCGGGAAAACTGTGGTTTTACAATCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGGCAGGAACAGCGCGCCAGCCTTCGAGCTCCGTGTATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGCCCAAAAAAAACCGGCGACACGCTTCCATTGTGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGGTGCAGTCTCTGGACTCCATCCAGGCGCTGCGTGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGATAATACGCCTGATAATACGTTGTTGCATGCGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTTCCGCGGTTTTGCGTACTTCCGCGTACTCCGGCGTTTTCCGATTTTTCGGCTCACAGAAGAGCACTGAAATTCGGCAGATCCATGTCTTGCACGTTGACCGACCAGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTTCCGACGCCGACGCCGGAGTACGCAGAAATTCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATGTGACGGTCTGCGATATGTTTCAGGGCAACATACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGTGCCATTCCGCACGAAGGAAGGAATACCGCTGCGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCGATCCGAGCGTGCTCTATTTACCGTGTTTTCGAGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATTCTGATTTCGACGCTCTCTTGTGGCTTCAACCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCTCTCACCACCATTTTCGCTATGTCGGCATCGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCATTCCCTGATGGAGGACGGCATGGATTGGATAATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGAGCGCCGACGGGCGCTGGTGGTCAGCGCGCTGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGAACAAAACTTTGGTCGATACCGGCCACTTTTTTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAAAGTTCAATACCTGGAAAAACTTTACCTCGCAAATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATTCGTAGTCCGGTTATCTGCTGGTCCTTATCGAACCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATACAATCTCGACGTAGCACAGTCGCCAACCCGGGTTATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCCGAAGTGGTATGGACAGACCCCGACATATGCTCGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTTGTACCCGCTGACAGTATTCCCCCCCCGTTTCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGTCGCTCCCTCTCCAACGCCGCCGGATTGACCTAAATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGAAACGAATGTCGCTTTCGCCGCGAATGTCTCATCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCGGTCAAGCGCACCGTCAGGCAGCACCAAGCCTGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCGATCCAGAGCGTTCTCCAACTCGTAAGGTTGTAAGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCTTTTCGCCGCGTTCAGCGCGCTGCGCACGGCGTTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGACTGTCATATGGGGATGCCGGTACATCGAGTGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCGAGCATCAGCACTGGCGGGGTTGTTGGACACGGCAAGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCCTGCCGCCAAAACGCTTGCGCGGCAGGCTGGAACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTGACTATCTTGTTGCAACGTATCCTTATGGGGAATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTTCCCTTTCGAAATTGCTCGATAGAGAAGAATCGCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGCTATCGAGCATCTCTCCAGAACGTCGTCCGGTATCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATACAAGCGCAGGAAGTCAATCCATTGACCGCCGCCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATGAACTCACCCGCACCGGACACCCAATCGCGGAGCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCCTGAAGGAAAGAAGCATTCTGTACGACCTAGTTGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCCGAGGGCGTCGGCGTCGAGGATTGCGCGGAGACCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATCAGTACTGTGGCCGGTTTCCTGGCGCTAGCGCCATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCTTCGTGGGCGACGCAAAGGCGAGCAAACTCACGCGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGTTACACTTCATACTCGGAGACTGGCTTCCGCCACCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAGACGACAACCGCGCCGCGCAGCGCCTGGACGGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCATGCCTGTTGCTACTACCATTGCCCTATTAGCGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTCGACGACCTGCGGCGGCATCTTCTCCAGCGCCTGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCGTCGGAAGTTGCGCGAAGGGAAGTCGGCGCGATGATCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTCGCAATCGCGCTCCACGCCGCAGACGCAGCGTTTTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCGATTGTGCGGCAGTTCCCGACGCCGCCATCGCTGCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCATCAACCATCACAGACGCTCTCACCATCCGATACCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGTCGAACATGTGCCGCGTCCCGTCATCATCGAAATTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCGACGCATGCGACGCTTGCGTGAGAAACGTGACATCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTCGTCAGCGCCTTCATCAACCATCACAGACGCTCTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCAAGCGTCGCGCACAAAACAGTTCGTAATCCGAACGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCGCCGGTCGGGTGCTCGATATTGCCTTGTTGCGCCGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTCGGCATCTGTGAGGAGGGGGCGCGAAAGGAGGCTTTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCTTCCCGGCTTCCCGGCGCCGGTTCCGGCTGCCGGTTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTATTGCAATCGCATCGGTCGCGTCGTCGGCGATTGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCGATCAGTTTTGTCAAGACTTCTCGATATGCCGGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCCGTTTTTCGTCTTGTCGTCTCATGTTGTCACCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCACATCGCGGATAAGCGCGTAGAGCGTTATATGCATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGGGTGTTGTATGCTTGACTATGCGCGCGTTCGATGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCGGTCGGTCTTGTCGCGCGGCGCTGCGCATCGTATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCAGCGCCTGGATGTCATCCAGCGAGCGCAACACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTCAACCGCGCGCCGGAGATCGCTGAACAACTCCTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGCTCAATGCTGCTGGCGCCATTGCGAGGATGATTGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGAGATCGCGCGTCGGATTGGATGCTCGCATATCACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCGGTGTGCTATGAGCGTGATGTTCCGGGCGACGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATACAAACGCAGGAAGTCAATCCATTGACCACCGCCGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCAGCGTGACGGCGTGGGGGGTCAGATTTACCAGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGGTCGTCTCCGTCGCCGCTCCCGCCCTCCCCGGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTACGAGTCAAATAATCGACACAATCACGCCGCGTCATCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCGTATGACTGGCGCCTGAACGCGAGTAGTTGATTCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGTCCAGCCATGCCAGCCTTCTTTCCACCCAGTCTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATGAAGGTAAGTACGGCGGAGCGTATGGATTGACTTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCGCTCGATAACCACGCGCGCGCGCGCGTCGTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGTCATACTCATCAACGCTGATCCCCATCAACACGTTGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCTCTCGCTCACGTCGAGCGCGATACATGTCGAATCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCGTAATTGATCGCTTCGCTCAGCATCCGATAGTGATTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGCGTAGTAACACGGTAGCAGCGTACTGTGTTCATCGTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTGTACGTGGTGTCAGCAACAAGACAGTGCCACTTTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATGTCGACAAAAATCAGCGCATCAACCTGTATTACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTTTCGAGCGAAACAAGCTTATCAACCATATCGCGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTTTGACCGAGCAAAAAGTTTACAGAGTCAATTAACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCGAGAATCAGGGCGTTATTGTAATTCAATCCCGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATGAACTCACCCGCACCGGACACCCAATCGCGGAGCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTTTACCACAAGACATAACACAAATATCCTTTGTAGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGTTAAACAACGTGCATTGGTTTAGAAGGACTGGTAAACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGTACAAACCTGGCAATCGGTGTAAACGGGTTGAATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGATTGTCTTGCGTGTCGCTCCACGAGACCTGACTCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGCAGGTTTCGGGAAATTATCAGGAGGAACGGTAGCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGGAAGGGATGTCATCTTCTCCTTGGTCGATAGAATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATCTCATCGCCAATCGATCGCTCTCGCCGCAAGTGGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATACGGTTCGGGTTACAACAAGCGCCCCGGCGAGTTTGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGGCGTTACGCGCCGCCGAGCGTTGCGCGCCGCGCACTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTTCAGATCGAGACGCCTCCAAAAGTTTTTTCTTTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCAAGATTGTCGCCAATTCGCCTGTCTGCTCTGTGTGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCATGGACAACCACGCGCCAACCCCGATCGGTGGTCGTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCCGTACTTACCTTCATTGGTGTACGGCGGCGAGATGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCTGTCCGAGACGGTTCACAATCGGTTCGATTTTGCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTAAGAGCATACGAAAAGAAGTTACTGCTATAAAGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGAAACTCAAGGGTGGGTCGCACCGATGTTTCCTGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCCCTTTTTCCTTGATCCAAACCTCGATGTCCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATACCCTAAGATTTTCTTCTTGTTGTTTTACGACAACATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAATACTATTTGAGCGTAGCAATGCGCATGCTTGCACCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATACGTCATGGCGCGCCGCCAAAAAGCCGCGCTAACGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAGGTCGAGCGCGAGTTGCCTCACGTCCTCAAGTGATTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTCCGCCCGCGCTGGCGCGCCACGCGCGGGCGACGGCCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGGTGCTGTTGTAGCGTCGTGACGGTGCGATTTTCTCGCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTTCCCGATTCGTGGTGGTCGTATGGATGGGATGACTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCGGGGTGCTCAAAAACCACGCAGAGCCCCGCTCGTGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCACAGGCGGCGGCGGACACAGCGATGCGTTGATGGCGCGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTTTGTGATGCCGGTATCGGCGCGACAAATGTCTGATTACGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATACAATTATTCCTTCGGCCGAGCGTTTGCGTTCAAAGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATTTATTGCGCGACGCGCAGACACGCGGCTTGATTGAGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCTCGTAGAGCTCGGAATGACACGCAAGGATTGCATTCAGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTATGACGGCGACCCCGGCTGGTATTGCCGTGACGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATCAGATCGTTGAGCCTGGGGAAGAGTACATCATAGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATACAGTAGATCATGCTGTCTGCTTGACTATGTGCGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGGCAAAACAGATCGCGCTCGCGCGCCCGCGCGCGGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATTTCAGAGAGGGCCATCCTTTCAATTACGTCGCCGGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATCAATGACCTATTCTCACCATCTTGCACCCGCGCAAGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTGGTTGGTCGCTGGGGGTGGAGCGTCACGCCGCCGGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATGTTATCAGAGCAGAAGATCGTTTCGCTCATCGATACGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATTCAGGGAACGCGGGAATAAGCGCGCGACAAGCGCCAAAGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATAGGTCGCAATTGGACCGCCGTCAATATGCAAAACGTGTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGCCCC

>NC_009767|82|13|4297314-4309006|PILER-CR
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AATGATTGAACCAATCCGCCGCCTGGGCCAGCCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATATTTCGAATTCGACTAACCCGTACCAGTGTCCAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAACATATCTGAGACCGGGGGGGAATATTGCAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCATAGGTACTCCTCTGACCTATGACCGGCGTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGACGCAAGCGGTCTTATCCAGGCGCTTGCAGATTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GAGCACTGGGCGGATAACCCGGCGCTGCGTCCTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TACGTGATCAGGTTGTGTGTTAATTATTACTGGATTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGCGACCGCGCCGACCGGACGCCAGCGCACCGCT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGACGGACCGCGCGGCGCGCGGCGAACACGGCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCTCAAGGGCAACCAGTTTGTCAACCATATCGCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCCGGGTTGACGCCTTCCTCACTGAAATGCAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGACAGCACCGCAGGCAGCAAGACGCCCAGCAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGATCAACGAGTGGATATTGGTACTGTATATAACCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGCGCTTGGCAAGAGCCTCTACACGCACGGCGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGCGTTCCCACAAGGTCGCCGTCGAAGACGGCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCAGCGCCGTGTCGCCCGGCTCGGGGGTTATCGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGGGTTGGGGTTAAGAGGGGCCCACGACAGGACGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTGATTTGCCGGGCCCGGAAAGCGGGGCGTATGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGAGCACTGGGCGGACAACCCGGCGCTGAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGAAAGGGGGGGGGATTGGGGCAGTATGGTTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACGCGGAGACGGTCGAGGAGGCGGTCGAGGAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCGCTCCCTCGCTTGCGTAGACGAACAACGTGCGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AACGCCGCGCCGCGCTCCTCATCAACAGCGCGCTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAATGCTTACATCGATCTGGAACCGACCCGGATAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATAGCGATGAAGGGGGGGATAACCTTCCCTTCTTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCGTCCGCACGAGCGACATCGCGCGCGACGTGATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTGGTGCCACGGCGCAGTCAACGACATGCGTCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCTCGGCGTCGACGTGCTGCTCAATTACGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACAACACCGCGTCGCAGCAGTTCTTCCGCTACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAATTCGGCATCACGAACCTCCTCATCAACAAAAGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGCGACTGACAGCAGCCCCATCGCCACGTTCACCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGGGTTCGTCCTTCTGGGCGCGTGGCGCGGCGCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCCGCTAGTACTTTAGTACCACACACACACCACCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCTCGCTCTACGACGGCGAGGACGGGCTGGCAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTGAATATGCCCGCCGATTGACCGGTAAGGATAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTTGCGGCGCGCCAGCGCACCCAGTCGCCGAACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTCCAAACGTTCGTATCCTCAACCCAATCGCCGCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCAAAAGACGCCGGGCGTGTTCTACGCCCGCGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGCGGCGGCGGCGGCGATGCTCATCACGCGATG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGTCATAAACGAGCACGAATTTCTCGACACGCGGGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGACTGCGGTCAACAGCGGCTCATCGCGCATTCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCTGCTCATCGACCTGGGCGAGGTGACGCTGCCGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCGTCGTTGTAAACAGAAACCGAGACCAACGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTGTTCGACGCCGCGCGCGGGCTGTCGGGCTTTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTGAACCTCGCCAGGAATATCGACGCCGCCAAACTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGACATGTGCAGCGTCAATGGAGTGACGCACGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTGCATTTGTAAAAAACGGGGAGTTTAGTCCTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAAAAGGCCTCTGGGAGCCATTATAAGGCGCGAAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTTATGCTCGACATCGTAAGCGCGCCGCTGCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAAACCTGCAACGGCGAACAACATCGCATCCATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CATCATGGATGAGTCGACGATGAGTCGCACGATAAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTCAGCGCGGTGAGCGCAGGCAGCGCCAGGCTGCCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGTATCGTCACGGTGCTAAACCGGCGAGGATTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCTACACGACAGGTACTCGGGAGTTTATCGAGGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCTCGATGTACTTGCCAGCGGGCGACGATCAAATTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGATCTCATTCCTTGTCAGACCAACAACACTGCGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCTGGACGATCGATGCGGGAATGTTAGCAAGCACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGGTCTTTGTGGCGGTCAAGCGGGCGATTGGACGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGTCACTGATGAGACGCTCATCAGTAACCGCAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGACATGGAACGGCGTTCGCGGTTGGAGCGCCTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCGTGCATGAAGGCGTCTTGGCCTGAAGACGCTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAACTCGCGCGCGCGGGCGAGGAGGGGGTCGTCGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAGGTATACGTAACGGTATAAACTGGTGACGGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGGAAGATCGAGGGAATCGAATTCGCGTCGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACGCATTCACACGCGTCCGCCTACAGGCATATACACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGCGCGCGCGCGAGTACTGCTTCCACCGCCGGACCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTTCGGCGCGTGATGAGTTGATTACGCGCTCAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCAGGGAGGGCATGAGATCGGCAAGCGCATCGTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCAGAGCCTTGTCCAATTCCAAGGCGACTTCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGTCGAACTTTGTGGGTAGGAGGCACTAAACCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACCTTTACTGAATAATACATGTTGACAAGAATGTCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGACGTGCGTGTCCGGCGTCTCACGCGACGCTGCT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACCGCGCGCGCGCGGCGGTTAAGCACAAATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAGGACGGTCACCAGCGCTGGAGCATCGACGTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGATTACACTAATGTACAATTTACATCTATCCTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCATATCTCTTATATTCCTGACGTGATAATCATACCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCAACGACGCCGAAGCGCCGGCGGTTATGGTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTATGCCTTATGAGGAGGACAAAAATGTGACTCTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCGCAATACACGGCGCCTTGGTAATTGTTGAAAAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TAAGTACGGTCGTCAATAGTACTTCCGGCGTGCCAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAAAGTACAAAACTTCTTCTCACCGAAAAAATCGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGGTGATGCGGGGCAAGCTGTTGAATCGTTGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTCGTGGTGCGGGTACAGTCCAAGCAATCCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCATTAAGCGCTCTATTTTTGCATCGAAAATAGTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTACAGTCAATTGACAATATTACAGGCGATTGGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGGGATCGTATGCGTGGTACTACAAAGGGCCCGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTTACCCCGCCAATAATGCAGCGCCGGACCATCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCTAGTTTGATGATGAGCGACTGCGCGTCTTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTATATGACTTGTACAGGCGAACAGTGTACACCTCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCAATCGTATATATCTTATATTCCTAACGTGATAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGCGACTTGACGCGCGACCTGATGCTCTGGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGAAGTTTTGTTTTGGCGGGAAAACTGTGGTTTTACAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGCAGGAACAGCGCGCCAGCCTTCGAGCTCCGTGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCCCAAAAAAAACCGGCGACACGCTTCCATTGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTGCAGTCTCTGGACTCCATCCAGGCGCTGCGTGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGATAATACGCCTGATAATACGTTGTTGCATGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCCGCGGTTTTGCGTACTTCCGCGTACTCCGGCGT
TTTCCGATTTTTCGGCTCACAGAAGAGCACTGAAAT	TCGGCAGATCCATGTCTTGCACGTTGACCGACCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCCGACGCCGACGCCGGAGTACGCAGAAATTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTGACGGTCTGCGATATGTTTCAGGGCAACATAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTGCCATTCCGCACGAAGGAAGGAATACCGCTGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGATCCGAGCGTGCTCTATTTACCGTGTTTTCGAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTCTGATTTCGACGCTCTCTTGTGGCTTCAACCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCTCACCACCATTTTCGCTATGTCGGCATCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCATTCCCTGATGGAGGACGGCATGGATTGGATAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGAGCGCCGACGGGCGCTGGTGGTCAGCGCGCTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAACAAAACTTTGGTCGATACCGGCCACTTTTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAAGTTCAATACCTGGAAAAACTTTACCTCGCAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTCGTAGTCCGGTTATCTGCTGGTCCTTATCGAACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAATCTCGACGTAGCACAGTCGCCAACCCGGGTTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCGAAGTGGTATGGACAGACCCCGACATATGCTCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTGTACCCGCTGACAGTATTCCCCCCCCGTTTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCGCTCCCTCTCCAACGCCGCCGGATTGACCTAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAACGAATGTCGCTTTCGCCGCGAATGTCTCATCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTCAAGCGCACCGTCAGGCAGCACCAAGCCTGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGATCCAGAGCGTTCTCCAACTCGTAAGGTTGTAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCTTTTCGCCGCGTTCAGCGCGCTGCGCACGGCGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGACTGTCATATGGGGATGCCGGTACATCGAGTGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGAGCATCAGCACTGGCGGGGTTGTTGGACACGGCAAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCTGCCGCCAAAACGCTTGCGCGGCAGGCTGGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGACTATCTTGTTGCAACGTATCCTTATGGGGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTCCCTTTCGAAATTGCTCGATAGAGAAGAATCGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTATCGAGCATCTCTCCAGAACGTCGTCCGGTATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAAGCGCAGGAAGTCAATCCATTGACCGCCGCCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGAACTCACCCGCACCGGACACCCAATCGCGGAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCTGAAGGAAAGAAGCATTCTGTACGACCTAGTTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCGAGGGCGTCGGCGTCGAGGATTGCGCGGAGACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAGTACTGTGGCCGGTTTCCTGGCGCTAGCGCCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTTCGTGGGCGACGCAAAGGCGAGCAAACTCACGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTTACACTTCATACTCGGAGACTGGCTTCCGCCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGACGACAACCGCGCCGCGCAGCGCCTGGACGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCATGCCTGTTGCTACTACCATTGCCCTATTAGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGACGACCTGCGGCGGCATCTTCTCCAGCGCCTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTCGGAAGTTGCGCGAAGGGAAGTCGGCGCGATGATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGCAATCGCGCTCCACGCCGCAGACGCAGCGTTT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGATTGTGCGGCAGTTCCCGACGCCGCCATCGCTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCATCAACCATCACAGACGCTCTCACCATCCGATACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCGAACATGTGCCGCGTCCCGTCATCATCGAAAT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGACGCATGCGACGCTTGCGTGAGAAACGTGACATCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGTCAGCGCCTTCATCAACCATCACAGACGCTCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCAAGCGTCGCGCACAAAACAGTTCGTAATCCGAACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGCCGGTCGGGTGCTCGATATTGCCTTGTTGCGCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGGCATCTGTGAGGAGGGGGCGCGAAAGGAGGCTT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTTCCCGGCTTCCCGGCGCCGGTTCCGGCTGCCGGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TATTGCAATCGCATCGGTCGCGTCGTCGGCGATTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGATCAGTTTTGTCAAGACTTCTCGATATGCCGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGTTTTTCGTCTTGTCGTCTCATGTTGTCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCACATCGCGGATAAGCGCGTAGAGCGTTATATGCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGGTGTTGTATGCTTGACTATGCGCGCGTTCGATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTCGGTCTTGTCGCGCGGCGCTGCGCATCGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGCGCCTGGATGTCATCCAGCGAGCGCAACAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCAACCGCGCGCCGGAGATCGCTGAACAACTCCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTCAATGCTGCTGGCGCCATTGCGAGGATGATTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAGATCGCGCGTCGGATTGGATGCTCGCATATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTGTGCTATGAGCGTGATGTTCCGGGCGACGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAAACGCAGGAAGTCAATCCATTGACCACCGCCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGCGTGACGGCGTGGGGGGTCAGATTTACCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTCGTCTCCGTCGCCGCTCCCGCCCTCCCCGGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTACGAGTCAAATAATCGACACAATCACGCCGCGTCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTATGACTGGCGCCTGAACGCGAGTAGTTGATTCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCCAGCCATGCCAGCCTTCTTTCCACCCAGTCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATGAAGGTAAGTACGGCGGAGCGTATGGATTGACTTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCGCTCGATAACCACGCGCGCGCGCGCGTCGTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCATACTCATCAACGCTGATCCCCATCAACACGTTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCTCGCTCACGTCGAGCGCGATACATGTCGAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGTAATTGATCGCTTCGCTCAGCATCCGATAGTGAT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTAGTAACACGGTAGCAGCGTACTGTGTTCATCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGTACGTGGTGTCAGCAACAAGACAGTGCCACTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTCGACAAAAATCAGCGCATCAACCTGTATTAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTTCGAGCGAAACAAGCTTATCAACCATATCGCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTTGACCGAGCAAAAAGTTTACAGAGTCAATTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGAGAATCAGGGCGTTATTGTAATTCAATCCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGAACTCACCCGCACCGGACACCCAATCGCGGAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTACCACAAGACATAACACAAATATCCTTTGTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTTAAACAACGTGCATTGGTTTAGAAGGACTGGTAAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTACAAACCTGGCAATCGGTGTAAACGGGTTGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATTGTCTTGCGTGTCGCTCCACGAGACCTGACTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCAGGTTTCGGGAAATTATCAGGAGGAACGGTAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGAAGGGATGTCATCTTCTCCTTGGTCGATAGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCTCATCGCCAATCGATCGCTCTCGCCGCAAGTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACGGTTCGGGTTACAACAAGCGCCCCGGCGAGTTTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCGTTACGCGCCGCCGAGCGTTGCGCGCCGCGCACTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCAGATCGAGACGCCTCCAAAAGTTTTTTCTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAGATTGTCGCCAATTCGCCTGTCTGCTCTGTGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CATGGACAACCACGCGCCAACCCCGATCGGTGGTCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTACTTACCTTCATTGGTGTACGGCGGCGAGATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTGTCCGAGACGGTTCACAATCGGTTCGATTTTGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTAAGAGCATACGAAAAGAAGTTACTGCTATAAAGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAACTCAAGGGTGGGTCGCACCGATGTTTCCTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCCTTTTTCCTTGATCCAAACCTCGATGTCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCCTAAGATTTTCTTCTTGTTGTTTTACGACAACA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AATACTATTTGAGCGTAGCAATGCGCATGCTTGCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACGTCATGGCGCGCCGCCAAAAAGCCGCGCTAACGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGGTCGAGCGCGAGTTGCCTCACGTCCTCAAGTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCCGCCCGCGCTGGCGCGCCACGCGCGGGCGACGGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGTGCTGTTGTAGCGTCGTGACGGTGCGATTTTCTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCCCGATTCGTGGTGGTCGTATGGATGGGATGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGGGGTGCTCAAAAACCACGCAGAGCCCCGCTCGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACAGGCGGCGGCGGACACAGCGATGCGTTGATGGCGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTGTGATGCCGGTATCGGCGCGACAAATGTCTGATTACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAATTATTCCTTCGGCCGAGCGTTTGCGTTCAAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTTATTGCGCGACGCGCAGACACGCGGCTTGATTGAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGTAGAGCTCGGAATGACACGCAAGGATTGCATTCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TATGACGGCGACCCCGGCTGGTATTGCCGTGACGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAGATCGTTGAGCCTGGGGAAGAGTACATCATAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATACAGTAGATCATGCTGTCTGCTTGACTATGTGCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGCAAAACAGATCGCGCTCGCGCGCCCGCGCGCGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTTCAGAGAGGGCCATCCTTTCAATTACGTCGCCGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAATGACCTATTCTCACCATCTTGCACCCGCGCAAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTTGGTCGCTGGGGGTGGAGCGTCACGCCGCCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTTATCAGAGCAGAAGATCGTTTCGCTCATCGATACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAGGGAACGCGGGAATAAGCGCGCGACAAGCGCCAAAG


>NC_009767|82|73|4297314-4312795|CRISPRCasFinder
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AATGATTGAACCAATCCGCCGCCTGGGCCAGCCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATATTTCGAATTCGACTAACCCGTACCAGTGTCCAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAACATATCTGAGACCGGGGGGGAATATTGCAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCATAGGTACTCCTCTGACCTATGACCGGCGTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGACGCAAGCGGTCTTATCCAGGCGCTTGCAGATTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GAGCACTGGGCGGATAACCCGGCGCTGCGTCCTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TACGTGATCAGGTTGTGTGTTAATTATTACTGGATTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGCGACCGCGCCGACCGGACGCCAGCGCACCGCT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGACGGACCGCGCGGCGCGCGGCGAACACGGCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCTCAAGGGCAACCAGTTTGTCAACCATATCGCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCCGGGTTGACGCCTTCCTCACTGAAATGCAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGACAGCACCGCAGGCAGCAAGACGCCCAGCAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGATCAACGAGTGGATATTGGTACTGTATATAACCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGCGCTTGGCAAGAGCCTCTACACGCACGGCGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGCGTTCCCACAAGGTCGCCGTCGAAGACGGCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCAGCGCCGTGTCGCCCGGCTCGGGGGTTATCGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGGGTTGGGGTTAAGAGGGGCCCACGACAGGACGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTGATTTGCCGGGCCCGGAAAGCGGGGCGTATGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGAGCACTGGGCGGACAACCCGGCGCTGAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGAAAGGGGGGGGGATTGGGGCAGTATGGTTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACGCGGAGACGGTCGAGGAGGCGGTCGAGGAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCGCTCCCTCGCTTGCGTAGACGAACAACGTGCGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AACGCCGCGCCGCGCTCCTCATCAACAGCGCGCTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAATGCTTACATCGATCTGGAACCGACCCGGATAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATAGCGATGAAGGGGGGGATAACCTTCCCTTCTTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCGTCCGCACGAGCGACATCGCGCGCGACGTGATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTGGTGCCACGGCGCAGTCAACGACATGCGTCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCTCGGCGTCGACGTGCTGCTCAATTACGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACAACACCGCGTCGCAGCAGTTCTTCCGCTACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAATTCGGCATCACGAACCTCCTCATCAACAAAAGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGCGACTGACAGCAGCCCCATCGCCACGTTCACCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGGGTTCGTCCTTCTGGGCGCGTGGCGCGGCGCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCCGCTAGTACTTTAGTACCACACACACACCACCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCTCGCTCTACGACGGCGAGGACGGGCTGGCAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTGAATATGCCCGCCGATTGACCGGTAAGGATAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTTGCGGCGCGCCAGCGCACCCAGTCGCCGAACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTCCAAACGTTCGTATCCTCAACCCAATCGCCGCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCAAAAGACGCCGGGCGTGTTCTACGCCCGCGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGCGGCGGCGGCGGCGATGCTCATCACGCGATG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGTCATAAACGAGCACGAATTTCTCGACACGCGGGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGACTGCGGTCAACAGCGGCTCATCGCGCATTCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCTGCTCATCGACCTGGGCGAGGTGACGCTGCCGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCGTCGTTGTAAACAGAAACCGAGACCAACGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTGTTCGACGCCGCGCGCGGGCTGTCGGGCTTTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTGAACCTCGCCAGGAATATCGACGCCGCCAAACTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGACATGTGCAGCGTCAATGGAGTGACGCACGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTGCATTTGTAAAAAACGGGGAGTTTAGTCCTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAAAAGGCCTCTGGGAGCCATTATAAGGCGCGAAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTTATGCTCGACATCGTAAGCGCGCCGCTGCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAAACCTGCAACGGCGAACAACATCGCATCCATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CATCATGGATGAGTCGACGATGAGTCGCACGATAAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTCAGCGCGGTGAGCGCAGGCAGCGCCAGGCTGCCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGTATCGTCACGGTGCTAAACCGGCGAGGATTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCTACACGACAGGTACTCGGGAGTTTATCGAGGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCTCGATGTACTTGCCAGCGGGCGACGATCAAATTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGATCTCATTCCTTGTCAGACCAACAACACTGCGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCTGGACGATCGATGCGGGAATGTTAGCAAGCACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGGTCTTTGTGGCGGTCAAGCGGGCGATTGGACGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGTCACTGATGAGACGCTCATCAGTAACCGCAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGACATGGAACGGCGTTCGCGGTTGGAGCGCCTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCGTGCATGAAGGCGTCTTGGCCTGAAGACGCTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAACTCGCGCGCGCGGGCGAGGAGGGGGTCGTCGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAGGTATACGTAACGGTATAAACTGGTGACGGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGGAAGATCGAGGGAATCGAATTCGCGTCGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACGCATTCACACGCGTCCGCCTACAGGCATATACACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGCGCGCGCGCGAGTACTGCTTCCACCGCCGGACCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTTCGGCGCGTGATGAGTTGATTACGCGCTCAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCAGGGAGGGCATGAGATCGGCAAGCGCATCGTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCAGAGCCTTGTCCAATTCCAAGGCGACTTCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGTCGAACTTTGTGGGTAGGAGGCACTAAACCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACCTTTACTGAATAATACATGTTGACAAGAATGTCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGACGTGCGTGTCCGGCGTCTCACGCGACGCTGCT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACCGCGCGCGCGCGGCGGTTAAGCACAAATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAGGACGGTCACCAGCGCTGGAGCATCGACGTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGATTACACTAATGTACAATTTACATCTATCCTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCATATCTCTTATATTCCTGACGTGATAATCATACCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCAACGACGCCGAAGCGCCGGCGGTTATGGTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTATGCCTTATGAGGAGGACAAAAATGTGACTCTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCGCAATACACGGCGCCTTGGTAATTGTTGAAAAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TAAGTACGGTCGTCAATAGTACTTCCGGCGTGCCAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAAAGTACAAAACTTCTTCTCACCGAAAAAATCGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGGTGATGCGGGGCAAGCTGTTGAATCGTTGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTCGTGGTGCGGGTACAGTCCAAGCAATCCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCATTAAGCGCTCTATTTTTGCATCGAAAATAGTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTACAGTCAATTGACAATATTACAGGCGATTGGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGGGATCGTATGCGTGGTACTACAAAGGGCCCGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTTACCCCGCCAATAATGCAGCGCCGGACCATCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCTAGTTTGATGATGAGCGACTGCGCGTCTTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTATATGACTTGTACAGGCGAACAGTGTACACCTCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCAATCGTATATATCTTATATTCCTAACGTGATAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGCGACTTGACGCGCGACCTGATGCTCTGGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGAAGTTTTGTTTTGGCGGGAAAACTGTGGTTTTACAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGCAGGAACAGCGCGCCAGCCTTCGAGCTCCGTGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCCCAAAAAAAACCGGCGACACGCTTCCATTGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTGCAGTCTCTGGACTCCATCCAGGCGCTGCGTGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGATAATACGCCTGATAATACGTTGTTGCATGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCCGCGGTTTTGCGTACTTCCGCGTACTCCGGCGT
TTTCCGATTTTTCGGCTCACAGAAGAGCACTGAAAT	TCGGCAGATCCATGTCTTGCACGTTGACCGACCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCCGACGCCGACGCCGGAGTACGCAGAAATTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTGACGGTCTGCGATATGTTTCAGGGCAACATAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTGCCATTCCGCACGAAGGAAGGAATACCGCTGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGATCCGAGCGTGCTCTATTTACCGTGTTTTCGAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTCTGATTTCGACGCTCTCTTGTGGCTTCAACCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCTCACCACCATTTTCGCTATGTCGGCATCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCATTCCCTGATGGAGGACGGCATGGATTGGATAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGAGCGCCGACGGGCGCTGGTGGTCAGCGCGCTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAACAAAACTTTGGTCGATACCGGCCACTTTTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAAGTTCAATACCTGGAAAAACTTTACCTCGCAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTCGTAGTCCGGTTATCTGCTGGTCCTTATCGAACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAATCTCGACGTAGCACAGTCGCCAACCCGGGTTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCGAAGTGGTATGGACAGACCCCGACATATGCTCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTGTACCCGCTGACAGTATTCCCCCCCCGTTTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCGCTCCCTCTCCAACGCCGCCGGATTGACCTAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAACGAATGTCGCTTTCGCCGCGAATGTCTCATCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTCAAGCGCACCGTCAGGCAGCACCAAGCCTGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGATCCAGAGCGTTCTCCAACTCGTAAGGTTGTAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCTTTTCGCCGCGTTCAGCGCGCTGCGCACGGCGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGACTGTCATATGGGGATGCCGGTACATCGAGTGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGAGCATCAGCACTGGCGGGGTTGTTGGACACGGCAAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCTGCCGCCAAAACGCTTGCGCGGCAGGCTGGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGACTATCTTGTTGCAACGTATCCTTATGGGGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTCCCTTTCGAAATTGCTCGATAGAGAAGAATCGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTATCGAGCATCTCTCCAGAACGTCGTCCGGTATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAAGCGCAGGAAGTCAATCCATTGACCGCCGCCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGAACTCACCCGCACCGGACACCCAATCGCGGAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCTGAAGGAAAGAAGCATTCTGTACGACCTAGTTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCGAGGGCGTCGGCGTCGAGGATTGCGCGGAGACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAGTACTGTGGCCGGTTTCCTGGCGCTAGCGCCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTTCGTGGGCGACGCAAAGGCGAGCAAACTCACGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTTACACTTCATACTCGGAGACTGGCTTCCGCCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGACGACAACCGCGCCGCGCAGCGCCTGGACGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCATGCCTGTTGCTACTACCATTGCCCTATTAGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGACGACCTGCGGCGGCATCTTCTCCAGCGCCTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTCGGAAGTTGCGCGAAGGGAAGTCGGCGCGATGATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGCAATCGCGCTCCACGCCGCAGACGCAGCGTTT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGATTGTGCGGCAGTTCCCGACGCCGCCATCGCTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCATCAACCATCACAGACGCTCTCACCATCCGATACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCGAACATGTGCCGCGTCCCGTCATCATCGAAAT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGACGCATGCGACGCTTGCGTGAGAAACGTGACATCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGTCAGCGCCTTCATCAACCATCACAGACGCTCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCAAGCGTCGCGCACAAAACAGTTCGTAATCCGAACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGCCGGTCGGGTGCTCGATATTGCCTTGTTGCGCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGGCATCTGTGAGGAGGGGGCGCGAAAGGAGGCTT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTTCCCGGCTTCCCGGCGCCGGTTCCGGCTGCCGGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TATTGCAATCGCATCGGTCGCGTCGTCGGCGATTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGATCAGTTTTGTCAAGACTTCTCGATATGCCGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGTTTTTCGTCTTGTCGTCTCATGTTGTCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCACATCGCGGATAAGCGCGTAGAGCGTTATATGCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGGTGTTGTATGCTTGACTATGCGCGCGTTCGATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTCGGTCTTGTCGCGCGGCGCTGCGCATCGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGCGCCTGGATGTCATCCAGCGAGCGCAACAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCAACCGCGCGCCGGAGATCGCTGAACAACTCCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTCAATGCTGCTGGCGCCATTGCGAGGATGATTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAGATCGCGCGTCGGATTGGATGCTCGCATATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTGTGCTATGAGCGTGATGTTCCGGGCGACGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAAACGCAGGAAGTCAATCCATTGACCACCGCCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGCGTGACGGCGTGGGGGGTCAGATTTACCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTCGTCTCCGTCGCCGCTCCCGCCCTCCCCGGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTACGAGTCAAATAATCGACACAATCACGCCGCGTCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTATGACTGGCGCCTGAACGCGAGTAGTTGATTCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCCAGCCATGCCAGCCTTCTTTCCACCCAGTCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGAAGGTAAGTACGGCGGAGCGTATGGATTGACT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGCTCGATAACCACGCGCGCGCGCGCGTCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCATACTCATCAACGCTGATCCCCATCAACACGTTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCTCGCTCACGTCGAGCGCGATACATGTCGAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGTAATTGATCGCTTCGCTCAGCATCCGATAGTGAT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTAGTAACACGGTAGCAGCGTACTGTGTTCATCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGTACGTGGTGTCAGCAACAAGACAGTGCCACTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTCGACAAAAATCAGCGCATCAACCTGTATTAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTTCGAGCGAAACAAGCTTATCAACCATATCGCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTTGACCGAGCAAAAAGTTTACAGAGTCAATTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGAGAATCAGGGCGTTATTGTAATTCAATCCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGAACTCACCCGCACCGGACACCCAATCGCGGAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTACCACAAGACATAACACAAATATCCTTTGTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTTAAACAACGTGCATTGGTTTAGAAGGACTGGTAAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTACAAACCTGGCAATCGGTGTAAACGGGTTGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATTGTCTTGCGTGTCGCTCCACGAGACCTGACTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCAGGTTTCGGGAAATTATCAGGAGGAACGGTAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGAAGGGATGTCATCTTCTCCTTGGTCGATAGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCTCATCGCCAATCGATCGCTCTCGCCGCAAGTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACGGTTCGGGTTACAACAAGCGCCCCGGCGAGTTTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCGTTACGCGCCGCCGAGCGTTGCGCGCCGCGCACTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCAGATCGAGACGCCTCCAAAAGTTTTTTCTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAGATTGTCGCCAATTCGCCTGTCTGCTCTGTGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CATGGACAACCACGCGCCAACCCCGATCGGTGGTCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTACTTACCTTCATTGGTGTACGGCGGCGAGATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTGTCCGAGACGGTTCACAATCGGTTCGATTTTGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTAAGAGCATACGAAAAGAAGTTACTGCTATAAAGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAACTCAAGGGTGGGTCGCACCGATGTTTCCTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCCTTTTTCCTTGATCCAAACCTCGATGTCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCCTAAGATTTTCTTCTTGTTGTTTTACGACAACA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AATACTATTTGAGCGTAGCAATGCGCATGCTTGCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACGTCATGGCGCGCCGCCAAAAAGCCGCGCTAACGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGGTCGAGCGCGAGTTGCCTCACGTCCTCAAGTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCCGCCCGCGCTGGCGCGCCACGCGCGGGCGACGGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGTGCTGTTGTAGCGTCGTGACGGTGCGATTTTCTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCCCGATTCGTGGTGGTCGTATGGATGGGATGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGGGGTGCTCAAAAACCACGCAGAGCCCCGCTCGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACAGGCGGCGGCGGACACAGCGATGCGTTGATGGCGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTGTGATGCCGGTATCGGCGCGACAAATGTCTGATTACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAATTATTCCTTCGGCCGAGCGTTTGCGTTCAAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTTATTGCGCGACGCGCAGACACGCGGCTTGATTGAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGTAGAGCTCGGAATGACACGCAAGGATTGCATTCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TATGACGGCGACCCCGGCTGGTATTGCCGTGACGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAGATCGTTGAGCCTGGGGAAGAGTACATCATAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATACAGTAGATCATGCTGTCTGCTTGACTATGTGCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGCAAAACAGATCGCGCTCGCGCGCCCGCGCGCGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTTCAGAGAGGGCCATCCTTTCAATTACGTCGCCGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAATGACCTATTCTCACCATCTTGCACCCGCGCAAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTTGGTCGCTGGGGGTGGAGCGTCACGCCGCCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTTATCAGAGCAGAAGATCGTTTCGCTCATCGATACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAGGGAACGCGGGAATAAGCGCGCGACAAGCGCCAAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGGTCGCAATTGGACCGCCGTCAATATGCAAAACGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGCCCC

>NC_009767|82|10|4297314-4312795|CRT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AATGATTGAACCAATCCGCCGCCTGGGCCAGCCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATATTTCGAATTCGACTAACCCGTACCAGTGTCCAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAACATATCTGAGACCGGGGGGGAATATTGCAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCATAGGTACTCCTCTGACCTATGACCGGCGTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGACGCAAGCGGTCTTATCCAGGCGCTTGCAGATTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GAGCACTGGGCGGATAACCCGGCGCTGCGTCCTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TACGTGATCAGGTTGTGTGTTAATTATTACTGGATTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGCGACCGCGCCGACCGGACGCCAGCGCACCGCT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGACGGACCGCGCGGCGCGCGGCGAACACGGCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCTCAAGGGCAACCAGTTTGTCAACCATATCGCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCCGGGTTGACGCCTTCCTCACTGAAATGCAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGACAGCACCGCAGGCAGCAAGACGCCCAGCAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGATCAACGAGTGGATATTGGTACTGTATATAACCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGCGCTTGGCAAGAGCCTCTACACGCACGGCGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGCGTTCCCACAAGGTCGCCGTCGAAGACGGCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCAGCGCCGTGTCGCCCGGCTCGGGGGTTATCGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGGGTTGGGGTTAAGAGGGGCCCACGACAGGACGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTGATTTGCCGGGCCCGGAAAGCGGGGCGTATGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGAGCACTGGGCGGACAACCCGGCGCTGAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGAAAGGGGGGGGGATTGGGGCAGTATGGTTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACGCGGAGACGGTCGAGGAGGCGGTCGAGGAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCGCTCCCTCGCTTGCGTAGACGAACAACGTGCGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AACGCCGCGCCGCGCTCCTCATCAACAGCGCGCTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAATGCTTACATCGATCTGGAACCGACCCGGATAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATAGCGATGAAGGGGGGGATAACCTTCCCTTCTTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCGTCCGCACGAGCGACATCGCGCGCGACGTGATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTGGTGCCACGGCGCAGTCAACGACATGCGTCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCTCGGCGTCGACGTGCTGCTCAATTACGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACAACACCGCGTCGCAGCAGTTCTTCCGCTACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAATTCGGCATCACGAACCTCCTCATCAACAAAAGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGCGACTGACAGCAGCCCCATCGCCACGTTCACCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGGGTTCGTCCTTCTGGGCGCGTGGCGCGGCGCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCCGCTAGTACTTTAGTACCACACACACACCACCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCTCGCTCTACGACGGCGAGGACGGGCTGGCAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTGAATATGCCCGCCGATTGACCGGTAAGGATAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTTGCGGCGCGCCAGCGCACCCAGTCGCCGAACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTCCAAACGTTCGTATCCTCAACCCAATCGCCGCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCAAAAGACGCCGGGCGTGTTCTACGCCCGCGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGCGGCGGCGGCGGCGATGCTCATCACGCGATG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGTCATAAACGAGCACGAATTTCTCGACACGCGGGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGACTGCGGTCAACAGCGGCTCATCGCGCATTCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCTGCTCATCGACCTGGGCGAGGTGACGCTGCCGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCGTCGTTGTAAACAGAAACCGAGACCAACGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTGTTCGACGCCGCGCGCGGGCTGTCGGGCTTTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTGAACCTCGCCAGGAATATCGACGCCGCCAAACTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGACATGTGCAGCGTCAATGGAGTGACGCACGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTGCATTTGTAAAAAACGGGGAGTTTAGTCCTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAAAAGGCCTCTGGGAGCCATTATAAGGCGCGAAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTTATGCTCGACATCGTAAGCGCGCCGCTGCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAAACCTGCAACGGCGAACAACATCGCATCCATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CATCATGGATGAGTCGACGATGAGTCGCACGATAAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTCAGCGCGGTGAGCGCAGGCAGCGCCAGGCTGCCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGTATCGTCACGGTGCTAAACCGGCGAGGATTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCTACACGACAGGTACTCGGGAGTTTATCGAGGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCTCGATGTACTTGCCAGCGGGCGACGATCAAATTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGATCTCATTCCTTGTCAGACCAACAACACTGCGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCTGGACGATCGATGCGGGAATGTTAGCAAGCACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGGTCTTTGTGGCGGTCAAGCGGGCGATTGGACGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGTCACTGATGAGACGCTCATCAGTAACCGCAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGACATGGAACGGCGTTCGCGGTTGGAGCGCCTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCGTGCATGAAGGCGTCTTGGCCTGAAGACGCTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAACTCGCGCGCGCGGGCGAGGAGGGGGTCGTCGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAGGTATACGTAACGGTATAAACTGGTGACGGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGGAAGATCGAGGGAATCGAATTCGCGTCGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACGCATTCACACGCGTCCGCCTACAGGCATATACACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGCGCGCGCGCGAGTACTGCTTCCACCGCCGGACCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTTCGGCGCGTGATGAGTTGATTACGCGCTCAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCAGGGAGGGCATGAGATCGGCAAGCGCATCGTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCAGAGCCTTGTCCAATTCCAAGGCGACTTCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGTCGAACTTTGTGGGTAGGAGGCACTAAACCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACCTTTACTGAATAATACATGTTGACAAGAATGTCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGACGTGCGTGTCCGGCGTCTCACGCGACGCTGCT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACCGCGCGCGCGCGGCGGTTAAGCACAAATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAGGACGGTCACCAGCGCTGGAGCATCGACGTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGATTACACTAATGTACAATTTACATCTATCCTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCATATCTCTTATATTCCTGACGTGATAATCATACCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCAACGACGCCGAAGCGCCGGCGGTTATGGTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTATGCCTTATGAGGAGGACAAAAATGTGACTCTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCGCAATACACGGCGCCTTGGTAATTGTTGAAAAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TAAGTACGGTCGTCAATAGTACTTCCGGCGTGCCAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAAAGTACAAAACTTCTTCTCACCGAAAAAATCGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGGTGATGCGGGGCAAGCTGTTGAATCGTTGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTCGTGGTGCGGGTACAGTCCAAGCAATCCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCATTAAGCGCTCTATTTTTGCATCGAAAATAGTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTACAGTCAATTGACAATATTACAGGCGATTGGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGGGATCGTATGCGTGGTACTACAAAGGGCCCGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTTACCCCGCCAATAATGCAGCGCCGGACCATCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCTAGTTTGATGATGAGCGACTGCGCGTCTTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTATATGACTTGTACAGGCGAACAGTGTACACCTCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCAATCGTATATATCTTATATTCCTAACGTGATAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGCGACTTGACGCGCGACCTGATGCTCTGGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGAAGTTTTGTTTTGGCGGGAAAACTGTGGTTTTACAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGCAGGAACAGCGCGCCAGCCTTCGAGCTCCGTGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCCCAAAAAAAACCGGCGACACGCTTCCATTGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTGCAGTCTCTGGACTCCATCCAGGCGCTGCGTGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGATAATACGCCTGATAATACGTTGTTGCATGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCCGCGGTTTTGCGTACTTCCGCGTACTCCGGCGT
TTTCCGATTTTTCGGCTCACAGAAGAGCACTGAAAT	TCGGCAGATCCATGTCTTGCACGTTGACCGACCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCCGACGCCGACGCCGGAGTACGCAGAAATTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTGACGGTCTGCGATATGTTTCAGGGCAACATAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTGCCATTCCGCACGAAGGAAGGAATACCGCTGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGATCCGAGCGTGCTCTATTTACCGTGTTTTCGAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTCTGATTTCGACGCTCTCTTGTGGCTTCAACCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCTCACCACCATTTTCGCTATGTCGGCATCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCATTCCCTGATGGAGGACGGCATGGATTGGATAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGAGCGCCGACGGGCGCTGGTGGTCAGCGCGCTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAACAAAACTTTGGTCGATACCGGCCACTTTTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAAGTTCAATACCTGGAAAAACTTTACCTCGCAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTCGTAGTCCGGTTATCTGCTGGTCCTTATCGAACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAATCTCGACGTAGCACAGTCGCCAACCCGGGTTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCGAAGTGGTATGGACAGACCCCGACATATGCTCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTGTACCCGCTGACAGTATTCCCCCCCCGTTTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCGCTCCCTCTCCAACGCCGCCGGATTGACCTAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAACGAATGTCGCTTTCGCCGCGAATGTCTCATCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTCAAGCGCACCGTCAGGCAGCACCAAGCCTGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGATCCAGAGCGTTCTCCAACTCGTAAGGTTGTAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCTTTTCGCCGCGTTCAGCGCGCTGCGCACGGCGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGACTGTCATATGGGGATGCCGGTACATCGAGTGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGAGCATCAGCACTGGCGGGGTTGTTGGACACGGCAAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCTGCCGCCAAAACGCTTGCGCGGCAGGCTGGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGACTATCTTGTTGCAACGTATCCTTATGGGGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTCCCTTTCGAAATTGCTCGATAGAGAAGAATCGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTATCGAGCATCTCTCCAGAACGTCGTCCGGTATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAAGCGCAGGAAGTCAATCCATTGACCGCCGCCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGAACTCACCCGCACCGGACACCCAATCGCGGAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCTGAAGGAAAGAAGCATTCTGTACGACCTAGTTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCGAGGGCGTCGGCGTCGAGGATTGCGCGGAGACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAGTACTGTGGCCGGTTTCCTGGCGCTAGCGCCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTTCGTGGGCGACGCAAAGGCGAGCAAACTCACGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTTACACTTCATACTCGGAGACTGGCTTCCGCCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGACGACAACCGCGCCGCGCAGCGCCTGGACGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCATGCCTGTTGCTACTACCATTGCCCTATTAGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGACGACCTGCGGCGGCATCTTCTCCAGCGCCTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTCGGAAGTTGCGCGAAGGGAAGTCGGCGCGATGATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGCAATCGCGCTCCACGCCGCAGACGCAGCGTTT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGATTGTGCGGCAGTTCCCGACGCCGCCATCGCTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCATCAACCATCACAGACGCTCTCACCATCCGATACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCGAACATGTGCCGCGTCCCGTCATCATCGAAAT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGACGCATGCGACGCTTGCGTGAGAAACGTGACATCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGTCAGCGCCTTCATCAACCATCACAGACGCTCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCAAGCGTCGCGCACAAAACAGTTCGTAATCCGAACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGCCGGTCGGGTGCTCGATATTGCCTTGTTGCGCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGGCATCTGTGAGGAGGGGGCGCGAAAGGAGGCTT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTTCCCGGCTTCCCGGCGCCGGTTCCGGCTGCCGGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TATTGCAATCGCATCGGTCGCGTCGTCGGCGATTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGATCAGTTTTGTCAAGACTTCTCGATATGCCGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGTTTTTCGTCTTGTCGTCTCATGTTGTCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCACATCGCGGATAAGCGCGTAGAGCGTTATATGCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGGTGTTGTATGCTTGACTATGCGCGCGTTCGATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTCGGTCTTGTCGCGCGGCGCTGCGCATCGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGCGCCTGGATGTCATCCAGCGAGCGCAACAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCAACCGCGCGCCGGAGATCGCTGAACAACTCCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTCAATGCTGCTGGCGCCATTGCGAGGATGATTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAGATCGCGCGTCGGATTGGATGCTCGCATATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTGTGCTATGAGCGTGATGTTCCGGGCGACGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAAACGCAGGAAGTCAATCCATTGACCACCGCCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGCGTGACGGCGTGGGGGGTCAGATTTACCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTCGTCTCCGTCGCCGCTCCCGCCCTCCCCGGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTACGAGTCAAATAATCGACACAATCACGCCGCGTCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTATGACTGGCGCCTGAACGCGAGTAGTTGATTCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCCAGCCATGCCAGCCTTCTTTCCACCCAGTCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGAAGGTAAGTACGGCGGAGCGTATGGATTGACT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGCTCGATAACCACGCGCGCGCGCGCGTCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCATACTCATCAACGCTGATCCCCATCAACACGTTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCTCGCTCACGTCGAGCGCGATACATGTCGAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGTAATTGATCGCTTCGCTCAGCATCCGATAGTGAT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTAGTAACACGGTAGCAGCGTACTGTGTTCATCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGTACGTGGTGTCAGCAACAAGACAGTGCCACTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTCGACAAAAATCAGCGCATCAACCTGTATTAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTTCGAGCGAAACAAGCTTATCAACCATATCGCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTTGACCGAGCAAAAAGTTTACAGAGTCAATTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGAGAATCAGGGCGTTATTGTAATTCAATCCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGAACTCACCCGCACCGGACACCCAATCGCGGAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTACCACAAGACATAACACAAATATCCTTTGTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTTAAACAACGTGCATTGGTTTAGAAGGACTGGTAAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTACAAACCTGGCAATCGGTGTAAACGGGTTGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATTGTCTTGCGTGTCGCTCCACGAGACCTGACTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCAGGTTTCGGGAAATTATCAGGAGGAACGGTAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGAAGGGATGTCATCTTCTCCTTGGTCGATAGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCTCATCGCCAATCGATCGCTCTCGCCGCAAGTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACGGTTCGGGTTACAACAAGCGCCCCGGCGAGTTTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCGTTACGCGCCGCCGAGCGTTGCGCGCCGCGCACTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCAGATCGAGACGCCTCCAAAAGTTTTTTCTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAGATTGTCGCCAATTCGCCTGTCTGCTCTGTGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CATGGACAACCACGCGCCAACCCCGATCGGTGGTCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTACTTACCTTCATTGGTGTACGGCGGCGAGATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTGTCCGAGACGGTTCACAATCGGTTCGATTTTGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTAAGAGCATACGAAAAGAAGTTACTGCTATAAAGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAACTCAAGGGTGGGTCGCACCGATGTTTCCTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCCTTTTTCCTTGATCCAAACCTCGATGTCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCCTAAGATTTTCTTCTTGTTGTTTTACGACAACA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AATACTATTTGAGCGTAGCAATGCGCATGCTTGCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACGTCATGGCGCGCCGCCAAAAAGCCGCGCTAACGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGGTCGAGCGCGAGTTGCCTCACGTCCTCAAGTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCCGCCCGCGCTGGCGCGCCACGCGCGGGCGACGGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGTGCTGTTGTAGCGTCGTGACGGTGCGATTTTCTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCCCGATTCGTGGTGGTCGTATGGATGGGATGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGGGGTGCTCAAAAACCACGCAGAGCCCCGCTCGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACAGGCGGCGGCGGACACAGCGATGCGTTGATGGCGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTGTGATGCCGGTATCGGCGCGACAAATGTCTGATTACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAATTATTCCTTCGGCCGAGCGTTTGCGTTCAAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTTATTGCGCGACGCGCAGACACGCGGCTTGATTGAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGTAGAGCTCGGAATGACACGCAAGGATTGCATTCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TATGACGGCGACCCCGGCTGGTATTGCCGTGACGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAGATCGTTGAGCCTGGGGAAGAGTACATCATAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATACAGTAGATCATGCTGTCTGCTTGACTATGTGCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGCAAAACAGATCGCGCTCGCGCGCCCGCGCGCGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTTCAGAGAGGGCCATCCTTTCAATTACGTCGCCGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAATGACCTATTCTCACCATCTTGCACCCGCGCAAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTTGGTCGCTGGGGGTGGAGCGTCACGCCGCCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTTATCAGAGCAGAAGATCGTTTCGCTCATCGATACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAGGGAACGCGGGAATAAGCGCGCGACAAGCGCCAAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGGTCGCAATTGGACCGCCGTCAATATGCAAAACGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGCCCC

>NC_009767|82|14|4309112-4312722|PILER-CR
	AATGATTGAACCAATCCGCCGCCTGGGCCAGCCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATATTTCGAATTCGACTAACCCGTACCAGTGTCCAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAACATATCTGAGACCGGGGGGGAATATTGCAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCATAGGTACTCCTCTGACCTATGACCGGCGTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGACGCAAGCGGTCTTATCCAGGCGCTTGCAGATTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GAGCACTGGGCGGATAACCCGGCGCTGCGTCCTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TACGTGATCAGGTTGTGTGTTAATTATTACTGGATTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGCGACCGCGCCGACCGGACGCCAGCGCACCGCT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGACGGACCGCGCGGCGCGCGGCGAACACGGCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCTCAAGGGCAACCAGTTTGTCAACCATATCGCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCCGGGTTGACGCCTTCCTCACTGAAATGCAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGACAGCACCGCAGGCAGCAAGACGCCCAGCAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGATCAACGAGTGGATATTGGTACTGTATATAACCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGCGCTTGGCAAGAGCCTCTACACGCACGGCGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGCGTTCCCACAAGGTCGCCGTCGAAGACGGCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCAGCGCCGTGTCGCCCGGCTCGGGGGTTATCGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGGGTTGGGGTTAAGAGGGGCCCACGACAGGACGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTGATTTGCCGGGCCCGGAAAGCGGGGCGTATGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGAGCACTGGGCGGACAACCCGGCGCTGAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGAAAGGGGGGGGGATTGGGGCAGTATGGTTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACGCGGAGACGGTCGAGGAGGCGGTCGAGGAGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCGCTCCCTCGCTTGCGTAGACGAACAACGTGCGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AACGCCGCGCCGCGCTCCTCATCAACAGCGCGCTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAATGCTTACATCGATCTGGAACCGACCCGGATAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATAGCGATGAAGGGGGGGATAACCTTCCCTTCTTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCGTCCGCACGAGCGACATCGCGCGCGACGTGATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTGGTGCCACGGCGCAGTCAACGACATGCGTCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCTCGGCGTCGACGTGCTGCTCAATTACGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACAACACCGCGTCGCAGCAGTTCTTCCGCTACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAATTCGGCATCACGAACCTCCTCATCAACAAAAGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGCGACTGACAGCAGCCCCATCGCCACGTTCACCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGGGTTCGTCCTTCTGGGCGCGTGGCGCGGCGCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCCGCTAGTACTTTAGTACCACACACACACCACCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCTCGCTCTACGACGGCGAGGACGGGCTGGCAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTGAATATGCCCGCCGATTGACCGGTAAGGATAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTTGCGGCGCGCCAGCGCACCCAGTCGCCGAACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTCCAAACGTTCGTATCCTCAACCCAATCGCCGCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCAAAAGACGCCGGGCGTGTTCTACGCCCGCGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGCGGCGGCGGCGGCGATGCTCATCACGCGATG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGTCATAAACGAGCACGAATTTCTCGACACGCGGGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGACTGCGGTCAACAGCGGCTCATCGCGCATTCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCTGCTCATCGACCTGGGCGAGGTGACGCTGCCGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCGTCGTTGTAAACAGAAACCGAGACCAACGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTGTTCGACGCCGCGCGCGGGCTGTCGGGCTTTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTGAACCTCGCCAGGAATATCGACGCCGCCAAACTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGACATGTGCAGCGTCAATGGAGTGACGCACGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTGCATTTGTAAAAAACGGGGAGTTTAGTCCTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAAAAGGCCTCTGGGAGCCATTATAAGGCGCGAAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTTATGCTCGACATCGTAAGCGCGCCGCTGCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAAACCTGCAACGGCGAACAACATCGCATCCATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CATCATGGATGAGTCGACGATGAGTCGCACGATAAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTCAGCGCGGTGAGCGCAGGCAGCGCCAGGCTGCCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGTATCGTCACGGTGCTAAACCGGCGAGGATTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCTACACGACAGGTACTCGGGAGTTTATCGAGGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCTCGATGTACTTGCCAGCGGGCGACGATCAAATTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGATCTCATTCCTTGTCAGACCAACAACACTGCGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCTGGACGATCGATGCGGGAATGTTAGCAAGCACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGGTCTTTGTGGCGGTCAAGCGGGCGATTGGACGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGTCACTGATGAGACGCTCATCAGTAACCGCAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGACATGGAACGGCGTTCGCGGTTGGAGCGCCTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCGTGCATGAAGGCGTCTTGGCCTGAAGACGCTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAACTCGCGCGCGCGGGCGAGGAGGGGGTCGTCGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAGGTATACGTAACGGTATAAACTGGTGACGGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATGGAAGATCGAGGGAATCGAATTCGCGTCGCCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACGCATTCACACGCGTCCGCCTACAGGCATATACACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGCGCGCGCGCGAGTACTGCTTCCACCGCCGGACCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGTTCGGCGCGTGATGAGTTGATTACGCGCTCAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCAGGGAGGGCATGAGATCGGCAAGCGCATCGTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCAGAGCCTTGTCCAATTCCAAGGCGACTTCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGTCGAACTTTGTGGGTAGGAGGCACTAAACCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACCTTTACTGAATAATACATGTTGACAAGAATGTCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGACGTGCGTGTCCGGCGTCTCACGCGACGCTGCT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGACCGCGCGCGCGCGGCGGTTAAGCACAAATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAGGACGGTCACCAGCGCTGGAGCATCGACGTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAGATTACACTAATGTACAATTTACATCTATCCTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCATATCTCTTATATTCCTGACGTGATAATCATACCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCAACGACGCCGAAGCGCCGGCGGTTATGGTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTATGCCTTATGAGGAGGACAAAAATGTGACTCTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCGCAATACACGGCGCCTTGGTAATTGTTGAAAAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TAAGTACGGTCGTCAATAGTACTTCCGGCGTGCCAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAAAGTACAAAACTTCTTCTCACCGAAAAAATCGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCTGGGTGATGCGGGGCAAGCTGTTGAATCGTTGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTCGTGGTGCGGGTACAGTCCAAGCAATCCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCATTAAGCGCTCTATTTTTGCATCGAAAATAGTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTACAGTCAATTGACAATATTACAGGCGATTGGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGGGATCGTATGCGTGGTACTACAAAGGGCCCGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTTACCCCGCCAATAATGCAGCGCCGGACCATCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCTAGTTTGATGATGAGCGACTGCGCGTCTTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTATATGACTTGTACAGGCGAACAGTGTACACCTCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCAATCGTATATATCTTATATTCCTAACGTGATAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGCGACTTGACGCGCGACCTGATGCTCTGGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGAAGTTTTGTTTTGGCGGGAAAACTGTGGTTTTACAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGCAGGAACAGCGCGCCAGCCTTCGAGCTCCGTGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCCCAAAAAAAACCGGCGACACGCTTCCATTGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTGCAGTCTCTGGACTCCATCCAGGCGCTGCGTGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGATAATACGCCTGATAATACGTTGTTGCATGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCCGCGGTTTTGCGTACTTCCGCGTACTCCGGCGT
TTTCCGATTTTTCGGCTCACAGAAGAGCACTGAAAT	TCGGCAGATCCATGTCTTGCACGTTGACCGACCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCCGACGCCGACGCCGGAGTACGCAGAAATTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTGACGGTCTGCGATATGTTTCAGGGCAACATAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTGCCATTCCGCACGAAGGAAGGAATACCGCTGCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGATCCGAGCGTGCTCTATTTACCGTGTTTTCGAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTCTGATTTCGACGCTCTCTTGTGGCTTCAACCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCTCACCACCATTTTCGCTATGTCGGCATCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCATTCCCTGATGGAGGACGGCATGGATTGGATAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGAGCGCCGACGGGCGCTGGTGGTCAGCGCGCTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAACAAAACTTTGGTCGATACCGGCCACTTTTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AAAGTTCAATACCTGGAAAAACTTTACCTCGCAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTCGTAGTCCGGTTATCTGCTGGTCCTTATCGAACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAATCTCGACGTAGCACAGTCGCCAACCCGGGTTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCGAAGTGGTATGGACAGACCCCGACATATGCTCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTGTACCCGCTGACAGTATTCCCCCCCCGTTTCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCGCTCCCTCTCCAACGCCGCCGGATTGACCTAAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAACGAATGTCGCTTTCGCCGCGAATGTCTCATCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTCAAGCGCACCGTCAGGCAGCACCAAGCCTGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGATCCAGAGCGTTCTCCAACTCGTAAGGTTGTAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCTTTTCGCCGCGTTCAGCGCGCTGCGCACGGCGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGACTGTCATATGGGGATGCCGGTACATCGAGTGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGAGCATCAGCACTGGCGGGGTTGTTGGACACGGCAAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCCTGCCGCCAAAACGCTTGCGCGGCAGGCTGGAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTGACTATCTTGTTGCAACGTATCCTTATGGGGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTCCCTTTCGAAATTGCTCGATAGAGAAGAATCGCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTATCGAGCATCTCTCCAGAACGTCGTCCGGTATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAAGCGCAGGAAGTCAATCCATTGACCGCCGCCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGAACTCACCCGCACCGGACACCCAATCGCGGAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCTGAAGGAAAGAAGCATTCTGTACGACCTAGTTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCCGAGGGCGTCGGCGTCGAGGATTGCGCGGAGACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAGTACTGTGGCCGGTTTCCTGGCGCTAGCGCCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTTCGTGGGCGACGCAAAGGCGAGCAAACTCACGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTTACACTTCATACTCGGAGACTGGCTTCCGCCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGACGACAACCGCGCCGCGCAGCGCCTGGACGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCATGCCTGTTGCTACTACCATTGCCCTATTAGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGACGACCTGCGGCGGCATCTTCTCCAGCGCCTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTCGGAAGTTGCGCGAAGGGAAGTCGGCGCGATGATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGCAATCGCGCTCCACGCCGCAGACGCAGCGTTT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGATTGTGCGGCAGTTCCCGACGCCGCCATCGCTGCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCATCAACCATCACAGACGCTCTCACCATCCGATACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCGAACATGTGCCGCGTCCCGTCATCATCGAAAT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGACGCATGCGACGCTTGCGTGAGAAACGTGACATCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGTCAGCGCCTTCATCAACCATCACAGACGCTCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCAAGCGTCGCGCACAAAACAGTTCGTAATCCGAACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGCCGGTCGGGTGCTCGATATTGCCTTGTTGCGCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCGGCATCTGTGAGGAGGGGGCGCGAAAGGAGGCTT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTTCCCGGCTTCCCGGCGCCGGTTCCGGCTGCCGGT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TATTGCAATCGCATCGGTCGCGTCGTCGGCGATTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGATCAGTTTTGTCAAGACTTCTCGATATGCCGGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCGTTTTTCGTCTTGTCGTCTCATGTTGTCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCACATCGCGGATAAGCGCGTAGAGCGTTATATGCA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGGTGTTGTATGCTTGACTATGCGCGCGTTCGATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTCGGTCTTGTCGCGCGGCGCTGCGCATCGTA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGCGCCTGGATGTCATCCAGCGAGCGCAACAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCAACCGCGCGCCGGAGATCGCTGAACAACTCCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCTCAATGCTGCTGGCGCCATTGCGAGGATGATTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAGATCGCGCGTCGGATTGGATGCTCGCATATCAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGGTGTGCTATGAGCGTGATGTTCCGGGCGACGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAAACGCAGGAAGTCAATCCATTGACCACCGCCGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCAGCGTGACGGCGTGGGGGGTCAGATTTACCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTCGTCTCCGTCGCCGCTCCCGCCCTCCCCGGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTACGAGTCAAATAATCGACACAATCACGCCGCGTCATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTATGACTGGCGCCTGAACGCGAGTAGTTGATTCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTCCAGCCATGCCAGCCTTCTTTCCACCCAGTCTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATATGAAGGTAAGTACGGCGGAGCGTATGGATTGACTTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAATCGCGCTCGATAACCACGCGCGCGCGCGCGTCGTCTTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTCATACTCATCAACGCTGATCCCCATCAACACGTTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCTCTCGCTCACGTCGAGCGCGATACATGTCGAATC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCGTAATTGATCGCTTCGCTCAGCATCCGATAGTGAT
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GCGTAGTAACACGGTAGCAGCGTACTGTGTTCATCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTGTACGTGGTGTCAGCAACAAGACAGTGCCACTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGTCGACAAAAATCAGCGCATCAACCTGTATTAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTTCGAGCGAAACAAGCTTATCAACCATATCGCGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTTTGACCGAGCAAAAAGTTTACAGAGTCAATTAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGAGAATCAGGGCGTTATTGTAATTCAATCCCGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATGAACTCACCCGCACCGGACACCCAATCGCGGAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTACCACAAGACATAACACAAATATCCTTTGTAGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTTAAACAACGTGCATTGGTTTAGAAGGACTGGTAAAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGTACAAACCTGGCAATCGGTGTAAACGGGTTGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GATTGTCTTGCGTGTCGCTCCACGAGACCTGACTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGCAGGTTTCGGGAAATTATCAGGAGGAACGGTAGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGAAGGGATGTCATCTTCTCCTTGGTCGATAGAA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCTCATCGCCAATCGATCGCTCTCGCCGCAAGTGGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACGGTTCGGGTTACAACAAGCGCCCCGGCGAGTTTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GGCGTTACGCGCCGCCGAGCGTTGCGCGCCGCGCACTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTCAGATCGAGACGCCTCCAAAAGTTTTTTCTTTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CAAGATTGTCGCCAATTCGCCTGTCTGCTCTGTGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CATGGACAACCACGCGCCAACCCCGATCGGTGGTCGTC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CCGTACTTACCTTCATTGGTGTACGGCGGCGAGATGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCTGTCCGAGACGGTTCACAATCGGTTCGATTTTGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTAAGAGCATACGAAAAGAAGTTACTGCTATAAAGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGAAACTCAAGGGTGGGTCGCACCGATGTTTCCTGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCCCTTTTTCCTTGATCCAAACCTCGATGTCCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACCCTAAGATTTTCTTCTTGTTGTTTTACGACAACA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AATACTATTTGAGCGTAGCAATGCGCATGCTTGCACC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACGTCATGGCGCGCCGCCAAAAAGCCGCGCTAACGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	AGGTCGAGCGCGAGTTGCCTCACGTCCTCAAGTGA
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCCGCCCGCGCTGGCGCGCCACGCGCGGGCGACGGCC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGTGCTGTTGTAGCGTCGTGACGGTGCGATTTTCTCGC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TTCCCGATTCGTGGTGGTCGTATGGATGGGATGAC
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGCGGGGTGCTCAAAAACCACGCAGAGCCCCGCTCGTG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CACAGGCGGCGGCGGACACAGCGATGCGTTGATGGCGCG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTTTGTGATGCCGGTATCGGCGCGACAAATGTCTGATTACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ACAATTATTCCTTCGGCCGAGCGTTTGCGTTCAAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTTATTGCGCGACGCGCAGACACGCGGCTTGATTGAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CTCGTAGAGCTCGGAATGACACGCAAGGATTGCATTCAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TATGACGGCGACCCCGGCTGGTATTGCCGTGACGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAGATCGTTGAGCCTGGGGAAGAGTACATCATAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATACAGTAGATCATGCTGTCTGCTTGACTATGTGCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	CGGCAAAACAGATCGCGCTCGCGCGCCCGCGCGCGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATTTCAGAGAGGGCCATCCTTTCAATTACGTCGCCGGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	ATCAATGACCTATTCTCACCATCTTGCACCCGCGCAAGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TGGTTGGTCGCTGGGGGTGGAGCGTCACGCCGCCGG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	GTTATCAGAGCAGAAGATCGTTTCGCTCATCGATACG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT	TCAGGGAACGCGGGAATAAGCGCGCGACAAGCGCCAAAG
TTTCCGATTTTTCGGCTCGCAGAAGAGCACTGAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121788.1|4323767_4324556_+|nucleotidyltransferase-family-protein	unknown	unknown	gnl|CDD|133024
NC_009767.1|WP_012121778.1|4295004_4296021_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187766
NC_009767.1|WP_012121777.1|4293455_4294412_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl|CDD|337605
NC_009767.1|WP_012121790.1|4327692_4329105_+|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl|CDD|236180
NC_009767.1|WP_012121783.1|4318146_4318539_+|response-regulator	unknown	unknown	gnl|CDD|381100
NC_009767.1|WP_012121786.1|4322169_4322511_-|hypothetical-protein	unknown	unknown	gnl|CDD|378182
NC_009767.1|WP_012121775.1|4290394_4291132_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl|CDD|273860
NC_009767.1|WP_012121779.1|4296100_4296358_+|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl|CDD|378256
NC_009767.1|WP_012121789.1|4325998_4327501_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121780.1|4296350_4296947_+|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl|CDD|273040
NC_009767.1|WP_041330993.1|4285179_4286070_-|histidine-kinase	csx1	pfam09623_csx1_CAS-III	gnl|CDD|187872
NC_009767.1|WP_012121782.1|4315114_4318126_+|response-regulator	unknown	unknown	gnl|CDD|236848
NC_009767.1|WP_012121772.1|4286213_4287389_+|hypothetical-protein	csx3	mkCas0115_csx3_CAS-I:CAS-III	gnl|CDD|187871
NC_009767.1|WP_012121776.1|4291109_4293449_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NC_009767.1|WP_012121784.1|4318598_4321301_+|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|236645
NC_009767.1|WP_041330997.1|4313547_4314741_-|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl|CDD|223708
NC_009767.1|WP_012121787.1|4322581_4323610_+|membrane-dipeptidase	unknown	unknown	gnl|CDD|366534
NC_009767.1|WP_012121773.1|4287699_4289205_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cls000029_cas8b2_CAS-I-B	gnl|CDD|187796
NC_009767.1|WP_012121774.1|4289293_4290385_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl|CDD|274215
NC_009767.1|WP_012121791.1|4329135_4329492_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012121778.1|4295004_4296021_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	2.5e-81	267.9	0.0
NC_009767.1|WP_012121777.1|4293455_4294412_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	4.1e-79	260.8	0.0
NC_009767.1|WP_012121772.1|4286213_4287389_+|hypothetical-protein	csx3	mkCas0115_csx3_CAS-I:CAS-III	3.2e-66	217.8	0.0
NC_009767.1|WP_012121776.1|4291109_4293449_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	6.4e-71	234.3	0.0
NC_009767.1|WP_012121774.1|4289293_4290385_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	1.3e-49	163.7	0.0
NC_009767.1|WP_012121779.1|4296100_4296358_+|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	1.4e-20	68.2	0.0
NC_009767.1|WP_041330993.1|4285179_4286070_-|histidine-kinase	csx1	pfam09623_csx1_CAS-III	9.1e-52	170.7	0.1
NC_009767.1|WP_012121775.1|4290394_4291132_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	3.6e-15	50.9	0.1
NC_009767.1|WP_012121780.1|4296350_4296947_+|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	2.1e-33	110.7	0.1
NC_009767.1|WP_012121773.1|4287699_4289205_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cls000029_cas8b2_CAS-I-B	8.3e-255	840.6	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121788.1|4323767_4324556_+|nucleotidyltransferase-family-protein	gnl|CDD|133024	cd04181, NTP_transferase, NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.	1.03688e-82
NC_009767.1|WP_012121778.1|4295004_4296021_+|CRISPR-associated-endonuclease-Cas1	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.45684e-97
NC_009767.1|WP_012121777.1|4293455_4294412_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	0.000360528
NC_009767.1|WP_012121790.1|4327692_4329105_+|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl|CDD|236180	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated.	0
NC_009767.1|WP_012121783.1|4318146_4318539_+|response-regulator	gnl|CDD|381100	cd17548, REC_DivK-like, phosphoacceptor receiver (REC) domain of DivK and similar proteins. Caulobacter crescentus DivK is an essential response regulator that is involved in the complex phosphorelay pathways controlling both cell division and motility. It localizes cell cycle regulators to specific poles of the cell during division. DivK contains a stand-alone REC domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	5.05514e-39
NC_009767.1|WP_012121786.1|4322169_4322511_-|hypothetical-protein	gnl|CDD|378182	pfam09413, DUF2007, Putative prokaryotic signal transducing protein. This is a family of putative prokaryotic signal transducing proteins of Pii-type.	1.65027e-06
NC_009767.1|WP_012121775.1|4290394_4291132_+|type-I-B-CRISPR-associated-protein-Cas5	gnl|CDD|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	6.52302e-28
NC_009767.1|WP_012121779.1|4296100_4296358_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	4.82605e-15
NC_009767.1|WP_012121780.1|4296350_4296947_+|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.04395e-34
NC_009767.1|WP_041330993.1|4285179_4286070_-|histidine-kinase	gnl|CDD|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	1.13378e-56
NC_009767.1|WP_012121782.1|4315114_4318126_+|response-regulator	gnl|CDD|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	1.53677e-68
NC_009767.1|WP_012121772.1|4286213_4287389_+|hypothetical-protein	gnl|CDD|187871	cd09740, Csx3_III-U, CRISPR/Cas system-associated protein Csx3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small protein in some cases fused to Csx1 (COG1517) family domains.	8.48967e-10
NC_009767.1|WP_012121776.1|4291109_4293449_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.27605e-68
NC_009767.1|WP_012121784.1|4318598_4321301_+|EAL-domain-containing-protein	gnl|CDD|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	1.2544e-117
NC_009767.1|WP_041330997.1|4313547_4314741_-|radical-SAM-family-heme-chaperone-HemW	gnl|CDD|223708	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism].	5.19295e-132
NC_009767.1|WP_012121787.1|4322581_4323610_+|membrane-dipeptidase	gnl|CDD|366534	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19).	2.13557e-119
NC_009767.1|WP_012121773.1|4287699_4289205_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl|CDD|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	9.07748e-09
NC_009767.1|WP_012121774.1|4289293_4290385_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl|CDD|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	6.53727e-50

Protein sequences

>NC_009767.1|WP_012121780.1|4296350_4296947_+|CRISPR-associated-protein-Cas4
MSESTFEVTDLRQWAYCPRVVYYQHCMPDIRPMTKLMIAGMEEHRAESGREERRSLRTYGLKQGERFFDVPLRSETLGLRGRVDLVIALPDRQHATEVIVVEYKSTEGKAGPHVKLQLTAYALMIEEAWGVPVKRGFIYHMPEHKAEAVTISAALRERVYTTVATIRETVDHERMPAPPASRRQCAVCEFRRFCNDVV
>NC_009767.1|WP_012121779.1|4296100_4296358_+|CRISPR-associated-endonuclease-Cas2
MRCLLIYDIPNDRARQKIADACLDYGLQRIQYSAFSGNLSRTHQRELMTEVKRRLGKNAGNIQLFTFPDDIWNARRVINQGESHE
>NC_009767.1|WP_012121778.1|4295004_4296021_+|CRISPR-associated-endonuclease-Cas1
MHLIVDQFGVFISKHQGRIRVMKEKERLSEVPIMHLEQILICSDGVGLSSDVVRACAEEGIPIHFLNSANGGDYGTFVHSGITGMALTRRAQLRAGDDERGLRLAQAFASGKIQSQANMLRYAAKNRKENDPDLHNDLMRTATEILDALPPLRAVRGVLTDETRAALMGFEGMAGARYWTAVARIIPDDLGWPGRETRGARDRFNQALNYGYGVLQSQVRTALILAGLDPNAGFLHADRPGKPSLTLDLIEEFRQAVVDRTLIGLVNRQFEIVQRDDGLLDEDTRKRIAEKILERLNSTELYEGKRQPLRHILQCQARHIATFVRGERPTYEPFVMGW
>NC_009767.1|WP_012121777.1|4293455_4294412_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MLTVHHLLLAFTAVTPLELDDNAGAAVRGAIVNALLNRFCANKAAPTCADCPLLTVCPVAALVAPMRDAGETGGEQRPRPYVTRPPQPRRYAPGETLTFGLGLFGHAADLFPYLVMAAQGIEVQGLGRRLQENNGRRGAVRLAAIDAFNPLTGAKQSLFRAGQRQVQAPGIPIGPAEVAAFAANLPTDRLTLRFLSPMRLIDGGRLVKRPALRPLVQRLGIRLTDLSTAYGDGPLPVADARSLLPLAEGATLARDTTRWIDVISHSRRTGERTPIGGFIGDAVFTGDLGPLRELLVWGSLVHVGKNAVKGDGWYNVES
>NC_009767.1|WP_012121776.1|4291109_4293449_+|CRISPR-associated-helicase/endonuclease-Cas3
MKPSPWPDWMDHILAKSQQYGGETLAAHTWDVLVKLSDLYRLRPRLDNGSQLWHCLYWAAFLHDFGKAARGFQQRLRGGQAWSHRHEVLSLAFVDTIADGFTPEEQRWLVAAIVSHHRDEPEIAETYPPGLRRDPLVDLCNELEPQVIDHLQRWLTECANPWREALGLAEVVGKITPQSVTVNPKRVRYWLQVYHDWVAANDPAARVPGILLRGLITTADHMASAHLHRVPPPITEPWSALAKRLLSQGQQVYDHQQQSGEMKGQSALLMAPTGSGKTEAALYWALGDGAAPPARIFYTLPYQASMNAMYDRLRQNFGDELVGLQHGRAAQALYARFREGEEWSAAARRVQWEKNLNILHARPLKVLSPYQLLKALFQLRGFEAMLTDYAQAAFVFDEIHAYEPERLALITGLMRYLREQFAARFFVMSATFPQLIRKQLTVALGDVPVIQACPEIFTHFRRHQLFLCDGELIDPTTIAAIVAEVQAGRQVLVCANTVARAQALRDQLAQAGLTDDQLLLIHSRFTYGDRSRIEQDIRARCGSNVTPRPPLALVATQVVEVSLDIDLDTIYTDPAPLEALLQRFGRVNRKGAKGICPVYVFRQPTDGQGVYGRDRDPQQAGHIVRVTLAELEQHNREIIDEAAINQWLDNIYADPVLSQQWTEAYQRMAQQVELIINGLRPFQSDEQREDDFEQMFDGVEVVPQCFEQAYVDCLVQERFIEANDYLVSISKQRFAILRNQGKIRPAEEVGQRRVWVALLPYDSRNGLSFGDTTYDPDWS
>NC_009767.1|WP_012121775.1|4290394_4291132_+|type-I-B-CRISPR-associated-protein-Cas5
MQALKIVLEGVTTSFRYPHFMLGVQPSFPLPPPATIYGHVCSALGDWVEPEGLAFAYHFTAAGEGEDLEHIHVLSAASGKLPGGERKALEGNVNPFRRRILLFPQLTLYLNRPDWIDAFRAPRYPVILGRSQDLAGYTRIEVVDLKQTEHVYFEHTLLPYTMATQIPAGIVTLMPRWIDYRNRRRPVFARYLIVQQRVTTAQMLRFDDQTSLYWSDPTAPSAGGVPLGLWFHTFVGANDEALAMA
>NC_009767.1|WP_012121774.1|4289293_4290385_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAFVTGLLLIDAPASALNNLGNIPGEREENTVGVKVITTKAGAFPYVSAQAFRYWLRTTLERRVPAWKASPMFREEKIAYTDANPILYWDDDIFGYMRAPGKSDTAKKSREQMTTLDEATPVTDTITRASPFRVSTLVSIAPVNLTNDFGVMSRHEGNPVPHEHQFYRTTLKGLFSLDLWACGTFSYLNRTGFRNLDDERLKLIRDYPGAEHLEAEKSYRLPKAERLARVKALFSGMAQLEGGAKQTLHYTDVSPALVIFAVTNGGNHIFHHTVGANRNGLPEVKIDALREALRVFADGIRSPVYVGWVKGYLDEARAGFEQFVAEHNATAADARLPSIHLSHPREAFTAFVKSFDQHPEWMD
>NC_009767.1|WP_012121773.1|4287699_4289205_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MPNPIAYTGHPFIDVGFATMCALTCKRRFADLTADDFQKVVDYIETNYVRQPLRSFLTVAFTSNAWFAQSAFNPDRFDDPNKKNEAQQKRTYWADRHLRQWAQAAESLETCLFTGLPAAALELSGKLQPGRVGRAQMPLLQGDDSINFFTNGDPGLPMAPEAILALQAMPLGCAKVGGGLLAVHCDDEALTIEFAGQFLQRNLADVTKAQAAGEEKLPGSPRSLKTLLIETLNAIQTRQAQEEWRRQHRPAITAYYFNNSQSPSLEIYYLPLQITGFLSAVHTPTYRALWNELVARSWQRPAAAGKRGKATEPTEPRFNYLFEDLFTLPAQAARFVRTYFLRIPDLRRPADDPRRAYSPRREVDLVSWTLVELFVQEVMLMTDDRVAKLKELGDKLADYTRAQGGKRFFRQFFTVQRTDHFLSLLNKTNIDYTRYKGGAETLFDLDSFLTLFMEGEEVLRSDWRLIRDLVLIRMVEQLRDWIANNADAVPSEEEVTIAEPA
>NC_009767.1|WP_012121772.1|4286213_4287389_+|hypothetical-protein
MNPFPAILIGGPPHSGKSVLTYLLTQELRRQRVEHYVLRACPDGEGDWSQEAPPETVRLLRQKGSFSANFVDRVCRDLAQRHLPLIVDAGGKPTRDQERIFDHCTHAVLISATVAGLTEWRERAERHGLAIIAELHSVLDGADRIDADAPVLRGQIGRLERHTGAVGPVALALAQRLKQVLSYTDVELKAYHLSHAPTELVIDIDHLARRIGLPERERRWQPDDLPFALNEVPDTALSIYGRGPNWLYAALALRAAPNTVFLFDPRLGWQPPVSLTCASSAAPDAVSWQITTTSEWTWIEMQPGMPYLDYHEIDGTTLPACDPQRGIVLSGKIPHWLTVGAALAYRHHPWLAIVQAQEYTNGIVVTSRVQEHRPGSLVALRGNWNPEHRSG
>NC_009767.1|WP_041330993.1|4285179_4286070_-|histidine-kinase
MGASMQPMTDAGATLVATLGGQPQIVTFALDALIAQGEIITDVYLIHLSLNNLRTRHALQRLQQEFLDDHYAGRRCRLRRVPLRANGSELTDIRAAADAEAAWQCIRDLIADLKREGRRLHLCLSGGRRMLALLAMSAAALLCDHQDRIWHMHTPEATLQRVKDSALMHVTPADGVQLIQAPLAPWGAYFPALRALAQTPMQAVETQLRRIVAVDEPQCRQVWERLTMRQRDVLCAFARGLRPDQVADALSISLSTVNTHKTAILAECRVAWELADDESLDYRFIRERFAMFIEGV
>NC_009767.1|WP_041330997.1|4313547_4314741_-|radical-SAM-family-heme-chaperone-HemW
MRHLYIHIPFCHRRCAYCDFNTYANMEDRMEAYVATLCAELRSLAHPQRTISPALPLTADLTRAMLRPTIFLGGGTPSMLPEALMERTLAAADGVIPLREAEVTVECNPGTVLRRDYLRALRAMGVNRISLGVQSLHDPTLRVLGRIHTAAEAYASFNDARAAGFKSINLDFIFGLPGQTIAQWEETLREIVSWGADHFALYSLILEERTPLYAQVSSGRVCVPDDDATGAMYELATEHFAVAGYVQYEISNWARSDDPAAPVPSHACHHNLAYWLNADYLAAGAGAHGHLYPHRYVDVAGIDDYITRVRAGNLPVAEVIDLTPRDLAAETIFMGLRLNAGVSFAHFRDRCGVEMDAIFGAELGDLAEQGLIERTERGVRLTDRGRMLGNRVFERFV
>NC_009767.1|WP_012121782.1|4315114_4318126_+|response-regulator
MTSLRATTLKAVAAALTALLALQVLASEFIIGRSFRELEERSVRNTMQQTLRTLRNEIDALYGNTKDYAAWDATYEFAMQRDLDYIDTHMTTDALINTRISYVAFVTPSGDIVYTRRQSSIDGQTLPIPADLTSFDGANALFLQVAARNEGISGVIVVNDQPMLIAAHPILTSAGSGPPRGVLIMGRDFDAAEIERMSNIIGYSLSLFLVNDASAAPDVTLARRLMNDDTPIVVRPLSFADDHIAGYAQIDDLRGGKGIVLRIDMPRDILQYGLSASRYYLLILLLVTGAFAAVILTLIERRILARIISLSTQVAQIGRVGNHQERVALSGNDEISQLGDAINRMLNDLAQSAQRLIQSEARYRQLVEISPEAIIVHDNEQIIYINPAGARLLGYADSSRLIGSPAAPFLPTALHNKTDDGAIRYERDLTLSNGQTVTLDLIAAPFVADGASVWQVVAHNITERKQTEEALRNARDWAEEASRAKSRFLANMSHELRTPLTTIIGYADLITLATQQGEFNRIRDDITRVRNAGKHLLAIINDLLDLSKIEAGRMEIHIAPFSVPALAEEVVASMDLLAQTRRNTLILTIDPTVGVMHSDDVRVRQVLYNLVHNACKFTEDGVVTVTIARSALESTVHVNGHSARIVFTISDTGIGMTDDQMARLFQEFTQADPTTMRKYGGTGLGLALSRHLVRMLGGDITVTSKPGVGTTFVVTLPENPAQVAEPAPELSEGEVLTASAPDTTRHQERKRLILLIDDDPSVRDLLPRMLERHDLHIETAADGASGLELARLLMPDLIILDILMPAIDGWTVLRELKASSETAAIPVILLTIADDTRSGALLGAAEILSKPTDLDRLERRIRLLLDKRATLTDTGERRVLIIEDDDAVREYLRRALAREHSDWTILEASDGQTALEQCKTSMPDSIVLDLMLPGMDGIQFIEALRLLPNGCSVPMIIVTAKELTPDERDHLHRSAIRILHKGTFHCDDFVHEVRTAVATYAQL
>NC_009767.1|WP_012121783.1|4318146_4318539_+|response-regulator
MTRILIVEDDAAIRELLARRLNMAGYDTIFAEDGVRALLASVNEAPDLILMDMGLPILNGWQVTERIKKRPETRNIPIIALTAYALSDDRYRALNIGCDDFEAKPIDFDRLIRKIEKLLSTGARQRETAA
>NC_009767.1|WP_012121784.1|4318598_4321301_+|EAL-domain-containing-protein
MPSRILVVDDHDYIRHLLVRLLTSQGHQTSVATGGREALDLLSQQSFDLVLLDLMMPDMNGIEVLEQLRQQNVIYHTPVIVVSGVHDLDMVAQCIELGADDYLFKPFNDVLLRARVNASLERKMLRDHERAYLERRLRTIDHETSDEPAIVTTPPATIDMALLTALDALERSQRERDRVEAELRRLNATLEERVAERSAAAEQSAAALRQQMLTQQSILDSIGDAIVVIDGDGRLLHVNPAARDLFGDRVVDLTPQATARASVLLLADDTSCPPDTLPLAVALRGEALDGAEFLLASPDSAKRWLSVTARPLRDLDGAISGAVAVFRDVTITRQAAEALRASEERYALAAQAANDGLWDWDLTTGKIYFSQRWKASIGFQDHEIGNDPSEWFDRVHPDDREGLEVRLVAHLHRLISGFEYEYRMRHHDGAYRWMSCRGIAVWNAGGQAVRIVGSQTDINARKLVEQRLLHEALHDSLTGLANRSCFMDRLEHVVARTRRGASSPFAVLFLDLDRFKLINDSLGHVVGDQLLIAIARRLERCLRPGDTLARLGGDEFAVLLEDLSEPQAALTVAERILRLLEEPFHLAGHEVFSSASIGIALNDSTRYHSPADVLRDADTAMYHAKMEGRSRYAVFHSAMHDRARHRLQIETDLRRGVERNEFFVVYQPIVELNTQQTVGFEALLRWRHPHRGIISPTEFIDVAEETGLIVPIGQMVLREACRQLSEWRQRHPARTITMHINLSPRQIADPHLVDDTIALLNAYHLDAGSLHLEITETAIIEHGDIASRALMHLRSLGAQICIDDFGAGYSSLSYLHRFPIGTIKIDRSFISQIHHSHENAEIVRTIIALAHSLGMTVIAEGAETEEQLARLRSMSCPYGQGWLFARALEPAAATALLDAA
>NC_009767.1|WP_012121786.1|4322169_4322511_-|hypothetical-protein
MSDDVLRWLPAAPQGTTGERTGGDGNGVGPVCVAEVEGMIRAHIIRSYLEDAGIPAHLAGEAVAGVYGLLHGPLSIVKVYVPAAFADDARDLLADLDFGAEGEPEAPADEGSC
>NC_009767.1|WP_012121787.1|4322581_4323610_+|membrane-dipeptidase
MTSALPVFDGHNDTLLRLYTAEHNDSFFSSPHGHLDLSRARTGGFAGGFFAVFVPPPTHASSPDDGILPDPLPYAYALQTTLGMAALLFRIESQSAGQVCVARTVSEIEYGLQTDTLSAILHLEGADPIDTEFHTLEVLYQAGLRSLGIVWSRPNAYGYGVPFRFPHTPDIGPGLTDAGRELVRACNRLGVLIDLSHLNEAGFWDVARLSDAPLVATHSNAHTICPSPRNLTDRQLDAIRESDGMVGVNFHVGFLRPDGQRDANTSLDVVANHVIYLVERLGLDRVGFGSDFDGALMPYDLGDAAGLPRLLETLRRRGFDAPSLRKLAHENWLRVLRKTWRS
>NC_009767.1|WP_012121788.1|4323767_4324556_+|nucleotidyltransferase-family-protein
MKALILAAGAGTRLRPLTDTCPKPMAPIAGQPLLAWTLEWLRRYGVTEAALNLHHLPDVVRAGLGDGSRFGIRLRYAVEEELRGTAGALHNFPGFFDQTFLVIYGDLLLDIDLDDLIRFHRQQGAIMTLALKRTDTPHSQGMIDIDTTGRVKRFIEKPAVWDGGDTANAGVYVCEPEIVSWTPPGFSDFGHDIIPALLHAGVPVYGRPLRGYLLDIGTPAAYEQAQQEWRARQEARGERGKRQEVSEARGEGQEARGERGKR
>NC_009767.1|WP_012121789.1|4325998_4327501_-|hypothetical-protein
MVRFLRFFVAIVLLDALAAALPAAAQQEPLPERPGDRTVGDMFPTTLPVDAPDSGMLTGIQAVSQVYLPLISMPAPPNPFGFDVRTYAPDAVMPLVVEANPRWSRAGDVLWALVEPVRGGGYRWEALADVERNVRRLRATGIEPTLIVQWSPSWAQSIPGKLCSAPRPDTIGEFAAFMRAVAQRFSSGDLRVDYWEIWNEPDFRPDEVKGDEGFGCWATYAAPYYGGDYYGQVLRAVYPAVKAGNPNAQVWGGALMHRWPDDTQTLGFVRGMLAAGAANSFDALSFHAYGEWGAGDRLLFKYWRLRRLLDEHGLNTKPMVATEIAATCTAPSICPPDFQRRQANYAARIYAQAIALSLLGAFWYPISFRGEGFLHSHLVDETDDGPTPRPSFYAFRNSARLLAGARYIGPPPVEPAPGQIGDVQVLTFEKGRNRLYVLWVPRTDFPVLYNLPVPPGVTAICTDQLNLSTPATYYCSDVNRDGLIPRAVNELPQYVEVVAP
>NC_009767.1|WP_012121790.1|4327692_4329105_+|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MTEYIENRTFDEIKIGDRASLTRTLTKSDIELFAVMSGDVNPAHLDEEYARSDIFHKIIAHGMWGGALISTVLGTMLPGPGTIYLSQTLRFRRPVAIGDTITVAVTVTAKDAEKRRVTLDCQCTNQHGEVVISGSAEVLAPTEKVKRQRVSLPEVLLHKPGANYEAVIQRASMLGTVRAAVVFPAEPAALHGIIEATHANLIDPIIIGPEAPLRRVAETLDINLSAFRLEPTTDGRAAAARAVALARAGTVEAIVDPGVRYYGLLHELVARDTGIADHRRMSHIYAMDVPNYPRLLLITDAGMNTDPTLEEKRAIVQNAIDLALALGIEQPKVAILAAVETISPKLRSTLDAAALCKMVDRGQIVGGIVDGPLAFENAVSPEAARRAKLTSLVAGQADILVAPDLEAGTMLVQQLDHLANAQSAGIIVGGRVPVALPEPSGNPQSVLAACAMAVLVARNGTERQDDGMMG
>NC_009767.1|WP_012121791.1|4329135_4329492_-|hypothetical-protein
MVMHRVTRGYLVLIAGLIAFFGRRLLAGDALWPPGLMHAEILSDTEMWIVIFTALMIGPAVALGRLRAMVIALPFSLPPIMLYLTFYPLLIVFLLLAMVPWLVHAALSSWMPERQQGT

Crispr_ID: NC_009767_83

• CRISPR_ID: NC_009767_83
• CRISPR_location: 4439005-4439123
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_83

Consensus_repeat	Method
GTGCGAAGGTCTGAAGGTTGTACGTTGAAGGGGAA	CRISPRCasFinder

spacers of NC_009767_83

>83.1|4439040|49|NC_009767|CRISPRCasFinder
AGTTGAACGTGGCACGTGGGAATACAGCAGCACAGAGAGACGGCAGCGG

CRISPR arrays and Neighbor proteins around NC_009767_83

CRISPR arrays

The CRISPR arrays of NC_009767_83

>merge|NC_009767|83|4439005-4439123|CRISPRCasFinder
GTGCGAAGGTCTGAAGGTTGTACGTTGAAGGGGAAAGTTGAACGTGGCACGTGGGAATACAGCAGCACAGAGAGACGGCAGCGGGTGCGAAGGTCTGAAGGTTGTACGTTGAAGGGGAA

>NC_009767|83|74|4439005-4439123|CRISPRCasFinder
GTGCGAAGGTCTGAAGGTTGTACGTTGAAGGGGAA	AGTTGAACGTGGCACGTGGGAATACAGCAGCACAGAGAGACGGCAGCGG
GTGCGAAGGTCTGAAGGTTGTACGTTGAAGGGGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121877.1|4434534_4434822_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121881.1|4437617_4438841_-|AI-2E-family-transporter	unknown	unknown	gnl|CDD|223701
NC_009767.1|WP_012121882.1|4439175_4439439_-|cell-division-topological-specificity-factor-MinE	unknown	unknown	gnl|CDD|172493
NC_009767.1|WP_012121890.1|4446740_4447505_+|prepilin-peptidase	unknown	unknown	gnl|CDD|377700
NC_009767.1|WP_012121875.1|4433450_4433738_+|hypothetical-protein	unknown	unknown	gnl|CDD|379213
NC_009767.1|WP_012121880.1|4436854_4437634_+|enoyl-ACP-reductase	unknown	unknown	gnl|CDD|223696
NC_009767.1|WP_012121879.1|4435703_4436777_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_009767.1|WP_012121884.1|4440360_4441038_-|septum-site-determining-protein-MinC	unknown	unknown	gnl|CDD|179052
NC_009767.1|WP_012121891.1|4447619_4451195_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173800
NC_009767.1|WP_041332118.1|4430216_4432010_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|131259
NC_009767.1|WP_012121873.1|4432249_4433230_+|deoxyhypusine-synthase	unknown	unknown	gnl|CDD|376661
NC_009767.1|WP_012121887.1|4443655_4444765_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|379311
NC_009767.1|WP_012121888.1|4444783_4445893_+|endolytic-transglycosylase-MltG	unknown	unknown	gnl|CDD|376862
NC_009767.1|WP_012121889.1|4445877_4446729_+|shikimate-dehydrogenase	unknown	unknown	gnl|CDD|234703
NC_009767.1|WP_012121878.1|4435089_4435701_+|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl|CDD|178955
NC_009767.1|WP_012121886.1|4442412_4443648_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl|CDD|235513
NC_009767.1|WP_012121871.1|4429365_4430061_-|haloacid-dehalogenase	unknown	unknown	gnl|CDD|184746
NC_009767.1|WP_012121876.1|4434143_4434323_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121885.1|4441149_4442316_-|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl|CDD|99734
NC_009767.1|WP_012121883.1|4439507_4440320_-|septum-site-determining-protein-MinD	unknown	unknown	gnl|CDD|225447

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121886.1|4442412_4443648_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl|CDD|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	0
NC_009767.1|WP_012121881.1|4437617_4438841_-|AI-2E-family-transporter	gnl|CDD|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	1.58562e-44
NC_009767.1|WP_012121882.1|4439175_4439439_-|cell-division-topological-specificity-factor-MinE	gnl|CDD|172493	PRK13991, PRK13991, cell division topological specificity factor MinE; Provisional.	4.26891e-47
NC_009767.1|WP_012121875.1|4433450_4433738_+|hypothetical-protein	gnl|CDD|379213	pfam13479, AAA_24, AAA domain. This AAA domain is found in a wide variety of presumed phage proteins.	0.00342308
NC_009767.1|WP_012121880.1|4436854_4437634_+|enoyl-ACP-reductase	gnl|CDD|223696	COG0623, FabI, Enoyl-[acyl-carrier-protein].	5.61901e-151
NC_009767.1|WP_012121879.1|4435703_4436777_-|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.40813e-11
NC_009767.1|WP_012121884.1|4440360_4441038_-|septum-site-determining-protein-MinC	gnl|CDD|179052	PRK00513, minC, septum formation inhibitor; Reviewed.	9.86308e-65
NC_009767.1|WP_012121891.1|4447619_4451195_+|S8-family-serine-peptidase	gnl|CDD|173800	cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins. The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	3.50274e-103
NC_009767.1|WP_041332118.1|4430216_4432010_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|131259	TIGR02204, system_ATPase_and_permease_component, ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.	0
NC_009767.1|WP_012121873.1|4432249_4433230_+|deoxyhypusine-synthase	gnl|CDD|376661	pfam01916, DS, Deoxyhypusine synthase. Eukaryotic initiation factor 5A (eIF-5A) contains an unusual amino acid, hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine]. The first step in the post-translational formation of hypusine is catalyzed by the enzyme deoxyhypusine synthase (DS) EC:1.1.1.249. The modified version of eIF-5A, and DS, are required for eukaryotic cell proliferation.	7.1081e-33
NC_009767.1|WP_012121890.1|4446740_4447505_+|prepilin-peptidase	gnl|CDD|377700	pfam06750, DiS_P_DiS, Bacterial Peptidase A24 N-terminal domain. This family is found at the N-terminus of the pre-pilin peptidases (pfam01478). It's function has not been specifically determined; however some of the family have been characterized as bifunctional, and this domain may contain the N-methylation activity (EC:2.1.1.-). It consists of an intracellular region between a pair of transmembrane. This region contains an invariant proline and two almost fully conserved disulphide bridges - hence the name DiS-P-DiS. The cysteines have been shown to be essential to the overall function of the enzyme in, but their role was incorrectly ascribed.	9.58676e-21
NC_009767.1|WP_012121888.1|4444783_4445893_+|endolytic-transglycosylase-MltG	gnl|CDD|376862	pfam02618, YceG, YceG-like family. This family of proteins is found in bacteria. Proteins in this family are typically between 332 and 389 amino acids in length. This family was previously incorrectly annotated and names as aminodeoxychorismate lyase. The structure of YceG was solved by X-ray crystallography.	4.87125e-101
NC_009767.1|WP_012121889.1|4445877_4446729_+|shikimate-dehydrogenase	gnl|CDD|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	9.98709e-94
NC_009767.1|WP_012121878.1|4435089_4435701_+|ATP-dependent-Clp-protease-proteolytic-subunit	gnl|CDD|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	9.22591e-106
NC_009767.1|WP_012121887.1|4443655_4444765_+|SH3-domain-containing-protein	gnl|CDD|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	3.33303e-13
NC_009767.1|WP_012121871.1|4429365_4430061_-|haloacid-dehalogenase	gnl|CDD|184746	PRK14562, PRK14562, haloacid dehalogenase superfamily protein; Provisional.	2.66025e-88
NC_009767.1|WP_012121885.1|4441149_4442316_-|pyridoxal-phosphate-dependent-aminotransferase	gnl|CDD|99734	cd00609, AAT_like, Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.	2.68425e-65
NC_009767.1|WP_012121883.1|4439507_4440320_-|septum-site-determining-protein-MinD	gnl|CDD|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	1.38755e-143

Protein sequences

>NC_009767.1|WP_012121881.1|4437617_4438841_-|AI-2E-family-transporter
MSAEARPIRFSPTVKLITIALIAALFFWLIRGLGNVLIPFVGAAITAYLFNPLITWLHRRARIGRAIWIGLLYVVIGGIIYGLWRTLGPVIEREYSGLQAQIPHTLNLIQQELLLRDRIMVAGISVEVAPITEALREALADFGRRIPEHVPHLVAVAFETLLLFVTYLIVTFYLLLEAPRIVEWLYELVPAPYRAEIRTLGSHIDHILAGYVRGTLMLIPIMATLTTIALTLLGVRYALVLGIVTGILETLPLLGPWSAAGIAITVALFQMPAPWGWPAWLIAGSIGLTYFVLRMFEDNFIIPHVVGPAVHLHPMLVIFAILAGGALGGPFGLFVAIPVTAVARLLLRYLYYKLIDSPDLPLEQAPAPDVPAPVSSDGVQPDQAPVSGDHMPIKSADQTEKAVTPAN
>NC_009767.1|WP_012121880.1|4436854_4437634_+|enoyl-ACP-reductase
MVLLQGKKGLVMGVANDHSIAWGIAKALHAQGADLGFTYVGEALERRVRPLAESLGARLIEPCDVQRDDDIDALMARVREVYGALDIIIHAIAFANRDELNGPYLKTTREGFRLALDVSAYSLTAVVKAAHDLLAPGASIVTLTYHGSQQVAQNYNVMGVAKAALEASVRYLANDLGPRGIRVNAISAGPIRTLAASGIAGFRTLHKQFAEVAPLRRNVTIEDVGNAAVWLCSDWSSAVTGEIIYVDAGFHTISISLPE
>NC_009767.1|WP_012121879.1|4435703_4436777_-|alpha/beta-hydrolase
MPLFLRALLLAVIVYEFLSDICEWRGLSWGHPALRPLLALLAPALHPRHVTWRQRASALALAALPALMVQAVAAGVRRRALDSRATLKPGLYDDCTVTRIDIPMPEAFMPALYVVPRAGAQTAVAVLHGSGCDKTYFAWRLTNALLRQRMAVLLVDLDGHGENPRVQRYPQMLECATEAVRWLRARHPRVGIVGISLGGCLAVRAAADGLDINALAILEAPPVLRFDHHDRLHEARMLFQPYVVDLLREASIVHLGSAVYRLVRAQRKPSIRAAISTWDLIAACDLCGSLARLTTPLLLVYGERDAIVKPAQAEEVWRAAPPGATMLLVPDASHLTLIMHPEALQHMAAWMAERLNA
>NC_009767.1|WP_012121878.1|4435089_4435701_+|ATP-dependent-Clp-protease-proteolytic-subunit
MPYVPVPTIVERTPRGERSWDLFSRLLQERIILLGTPIDDEVASLIVAQLLYLQHTDPDRDIWFYINSPGGSVRDGLAIYDTMKLISPDVCTVCIGRAGSMATILLAGGARGKRYALPNATIHFHPAGGGAEGYAPDMERIVRELLRIQELGNSLLARDTGRTVEEITRDFSRDRFMTAQEAREYGFIDAILESKKLPASTPA
>NC_009767.1|WP_012121877.1|4434534_4434822_-|hypothetical-protein
MTDEEPRPACRIGVTAEDLAREADRAVLYGAILAAQRPGVTIKPHLLDAVAALLPAVRAYLNGEENDLSSYALEYARACGAEAFLRSKRKPSAPC
>NC_009767.1|WP_012121876.1|4434143_4434323_+|hypothetical-protein
MEQRFYARYAGVIGGTTWSDVQRYLQSRALRPTTVEGWIAVAEAVRERARAEEVSVLSA
>NC_009767.1|WP_012121875.1|4433450_4433738_+|hypothetical-protein
MLDTEGAAQNLAGKPGIHRRIQVLQSLSLRALTAAMDEIRTQGKPGDTVILDSISKVFQAMRAYAQRRASAETDRKTEIAYLGQPQYAGGVHRAD
>NC_009767.1|WP_012121873.1|4432249_4433230_+|deoxyhypusine-synthase
MQTSGPVSQFLRHHFRHFNAAALVDAAEAYRAHLDKGGKMMITLAGAMSTAELGLSLAEMIRQDKVHAISCTGANLEEDIFNLIAHDFYERLPNYRDLTPAQEQALLERHMNRVTDTCIPEEEAIRRLERALIDEWMRADRTGEACFPHQFLYRILRSGALEQYYQIDPRDSWVYAAMERDLPIYVPGWEDSTTGNIYAAHCLAGEIGNVHTVRGGIEYMMDLADWYTRTSARHSIGFFQIGGGIAGDFPICVVPMLHQDLHRTNVPVWGYFCQISDSTTSYGSYSGAVPNEKITWGKLAVDTPKFIIESDATIVAPLIFALVLGW
>NC_009767.1|WP_041332118.1|4430216_4432010_+|ATP-binding-cassette-domain-containing-protein
MINRRSRHMLNAGEMLPVRAVDWRRLLTYLNPYRRHMAGALLALTGASAINLGFPLVIVQLLEAVLQQGNQTLLTNLTLALIALFFIQALLTFLQGYMLNIVGERIVLDMRVQLYRHLHALSLSFFANRRVGELVSRISSDVTQVRAILTNNVTQFLSSIVALIGAIIIVFLLNPRLVGFVLALAISVVAVAAIFGRWLQRFSTRVQDELADATVAVEEGLQGVRVVKSFVRESYEIERYERAMQRTLKAALRLALLRSGFGGLMAFLGFSGIAAILWFSGSEVLAGRMSFATISGFLIYAITIGASLAQLSGLYGQFREAVGAVRRVFEILDTQPTIKDVPDACDLPPVRGEITFDHVSFEYETGQGVLHDITLTVQPGEIVALVGPSGAGKSTLFNLIPRFYDPTSGRVLIDGYDLRSVTQRSLREQIGLVPQETMLFGGTIRENIVYGKLDANEEDIIAAAKAANAHDFIMAMPRGYDTLVGERGIKLSGGQRQRIAIARVMLKNPRILLLDEATSSLDSESEALVQEAFERLMRGRTSVIIAHRLSTVSIAHRIIVLNHGRIVEQGTHEELLAQQGLYARLYALQFREGVTVG
>NC_009767.1|WP_012121871.1|4429365_4430061_-|haloacid-dehalogenase
MNLIESVVARALAEIEACHTAREHALTLARALTRQCANTIRAVHRREFAEAAALLTEAGASARALRESLADHPDLLYAGYSQDALKEYAEAALVYAFLHGDPPPDASSLGVDAAAYLNGMAEAASELRRAILDSLRTGATERGVELLSVMEDVYSLLITVDYPEVVTGGLRRTTDALRAVLERTRGDVTAAIRQDQLIMALERFERRLDGHAAVDPDSVGDAVSPGQAGVP
>NC_009767.1|WP_012121882.1|4439175_4439439_-|cell-division-topological-specificity-factor-MinE
MSFLDSLFGKRQRSSDIARDRLLTVLVHDRVKLTPDMMEQLKAELSTVIARYVPSVDAGAIEVTLMRGEAVDHLKADIPLRRTSQKL
>NC_009767.1|WP_012121883.1|4439507_4440320_-|septum-site-determining-protein-MinD
MSRVITITSGKGGVGKTTSTANLGTALALQGLKVAVVDADIGLRNLDVVLGLENRIVYDLVDVVEGRCRLRQALIKDKHFPDLCLLPAAQTRDKDAVTADDMIALTNQLRAEFDYVLIDSPAGIEAGFRNAIAGADEVLIVTTPEVAAVRDADRIIGLVEAFEKGHPRLIINRLKPRMVSRGEMMSIDDVLQILAIDLIGVVPDDEQIVTSTNRGEVAVLDRSSRAGRAFAEIARRLAGEDVPITVFDDSPGLLNRIFGAFGIRARGSER
>NC_009767.1|WP_012121884.1|4440360_4441038_-|septum-site-determining-protein-MinC
MTTLVAIKGGKDGLRLHLNESAGWSDVIEALRSQLGQGAQFFNGARVIIDIGNRPLTEEQLAELMALMHEHHLEASALASTSRESRSAARAAGVVARPVTRSITAPESPDGALFIWRTVRSGQIVRHHGHVTIVGDVNAGAEVVAGGSVIVWGRVRGIVHAGALGDRTVIIGAIELRPMQLRIADLIARAPDGAAAGHPEVAYIDGDQIAVESWERYRRANRSDL
>NC_009767.1|WP_012121885.1|4441149_4442316_-|pyridoxal-phosphate-dependent-aminotransferase
MPGFLDGEDLSPNAIERARQASGEYIDLTSSNPTHQGLLFPDDVLREASAAYWANRRYDPDPRGLYAARLAIAQYYAERAPALSLHADQIVITASTSEAYSLLFALLTDPGDNVLAPAITYPLFEYLAMAHQIELRPYALDERRGWRIDPTSLRLQADERTRAVLVVSPHNPTGAVLASRAPVLHALDLPIICDEVFAAFPYRAATVPPVGALYPELPVFHLNGISKMFALPDLKLGWIALNDAAHDRFGERLEVLNDTFLSANALTQTMLPAIFEHGRAFTAAMHERIRQSLDMAIALLSGCDVVRVHPPDGGYYLFPEIVGWGDEEALILYLLKHGVLVHPGYFYGYEQGAHVVVSCLVAPSQLREGIERMVAALSAWVSARDSSS
>NC_009767.1|WP_012121886.1|4442412_4443648_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MSILTGKHILLGVTGSIAAYKVAELARHLTLDGAIVDVIMTAAAQRFVGSATFQALTGRPVLDDMWTLPEDGVVGHVSLGQHADLLVIAPATANTIARLAAGLCDDLLTTTALAVTAPILIAPAMNPRMYEHPATQANIALLRQRGVTVIEPEYGRMAEPVIGRGRLPEPWIIEAEIRALLGRTSGPLRGRRVVVTAGGTHEPIDPVRFIGNRASGRMGYAIAAAARDRGASVTLISGPARVQPPAAVTLVRVETALEMQREVESAIADADLLIMNAAVADFRPAIVAGQKIKKGDDEELTIRLVRNPDILASIAHRRDLVKIGFAAETHDLLTYARDKLERKGLDMIVANEAVASIGSEDIQLILIDAQGIERLPLLPKTEAAELLLDAIVERCAARWSDSRLDLGAAHD
>NC_009767.1|WP_012121887.1|4443655_4444765_+|SH3-domain-containing-protein
MTQPDDPKKPDDVNGSSADATDDGATDAPATARGMVQVTRTLTTPDRRVSANIANAALRQRLMTLIDALGDPGHPLHARAVDDLTALGEPAVPALIEALRTHEPWLLAYRATEALGQIGDGRAAGPLVEALRHPNSNVRWGAIRALATVGDARALLELRRVARTDRSKTSWGESVGDTARVVLEQMQSRTLLARVAELVKTAIACVLMLVSLIFAWSVLTELRDELSQVGRVEPAPVIIAPPMRTTAPQAALTPPTPVQTPTAPPAPSPPTPVPVNPSERTGIVVTSGNVRATPARLPDNVIGSVTAGDTLVFLGVTSDGAWYRVQLGSPTAPSSQIRSVDGSGWISASLVTAPADVPVETPPLPTPTP
>NC_009767.1|WP_012121888.1|4444783_4445893_+|endolytic-transglycosylase-MltG
MADAVRATAFAKTLRAIFLGIALLALSVACAGYLLLSEIRRPAGTDAAPVEFIVEPGDSASVIATRLGAANLVRQPLLFTILVRLRGLDGELQAGRYLLRANMTMSEIIAALQNSRVEEVQVTIIEGSRLEEIAEQLATAGLINVTEQAFLRTARNGAAFQPQHFYLNSLPPGASLEGYLFPDTYRFAVTATVTEVIEIMLDRFDEQYATFERDVTAPRVSVHEIVTMASIVQREAAREDEMPKIAAVFWNRLKPENLAETGGGKLGADPTIQYILGQRGNWWPRLDSLSSDEINGIASPYNTRVNPGLPPGPIASPGLAALRAAARPDESAPYLYFVASCTNPGAHNFAVTFEEFQRFEREYLTCPSR
>NC_009767.1|WP_012121889.1|4445877_4446729_+|shikimate-dehydrogenase
MSIALTGVIGDPVSHSLSPFLHHAAFEHLGIAARYERWQTSSAALPARVASLRAPHVLGANVTLPHKIAVVRLLDRLDPLAAQIGAVNTIVRLPDGQLEGCNTDAPATIATLREDAGVDPAGRRVVILGASGAARAAAFALIGARASMLTVINRTLERAEELLADVLASRDDDPYLRALALDDPDVPDAIRAADVIINATSLGWHRDETPLPGYLIPATALVFDMVYQPTRLLREAAQAGASTLDGRGMLVRQAALSFERWTGAPAPLDVMFAAFDQARSMAA
>NC_009767.1|WP_012121890.1|4446740_4447505_+|prepilin-peptidase
MDIVLVALTGLLLGALLNLIIIRLPREQGFGGWPRCTRCGQPLAWWQVLPLIGWLTQGGRARCCGQRLDALYPLVDLITAATLVLLYLQHHLSISMVYGSVVAAVLIVTGAIDWQHRLIYTLPTLSATLAATAVAFVVPFHSVLNALAGLLIAGILFVIFYVLARALFPAHRAPFGLGDVYLGMFIGAALGLTNLPGALLYGMLLAGAFSAILMILRRFGKRDTPQYISYGTFLCIGALIYLIIWGLAGPRPFS
>NC_009767.1|WP_012121891.1|4447619_4451195_+|S8-family-serine-peptidase
MQRLTLLAAVFGIALSAMLLPSASHAYETGEEPFTIGLSSAMPPPGYTNRRQPLTVMLALGDTNASPSAEGMLAPQTVGADIPTLRHLLAAANIPVLFEVHTAYNGIAVAVTPDQLSALRSLPGVANIHIITPKERSADRALTFIGAPQFWSATGQLIGNGVRIGIIDSGIDYTHATFGGPGTSTAFHSNNPTIIEPGTFPTEKVIAGYDFVGDAYDASGQFGSPLPFPDPDPLDCAGDGADAARRISGGHGTHVAGIAAGYGVDAAGRTYRGIYSASVPFNDFLVLPGVAPGATLVALKIFGCRGTTTFLTRAIDYAIDPNGDGNTDDRLVDVLNISLGSPFGGETDPDVVAINRAVEAGVVVVVAAGDTGNTFYSVNSPASAGRAITVGASVDTGRDPSLPPDSLDLLTSRGPQRARILKPDLVAPGLAIRSAAAGSGIGAQALSGTSIAAPHVAGTAALLRQLHPAWTPEQIKTALMNAARPARDASGNLYPPSLAGAGRLDVSTLFAYDVLAFDAESPSSVALSFGAPWINRTQQFQKTLRITNSGSHTRTLRLAPVIAAAEQGVLIETPSGPYEAPPGHTLEVPVTISVDPAALDFTRDETTPQRQIGDPPVFERYYMAEHSGVIEIRSTLGARIRSAHAGDFDGVTVYVDDQPLESSISPGRVGRYRAFSPGRKLVRAFQPGAPLTSPPLVAGEFDVVDGRDYTIVVYGSWRNPRLALVDNVPDPSVSRDAVMLHVFNGNPLRDGSAVDVYLDGALLVGNLPVGSVSAFSVTSPGNHKVRFLRAGSSPATSSSAASKEFVAGSGEVILVIGGGNASWSLRGFTGRGRLINEQTTRVPFQIVPKSASDLAATQSEVTIPTDAATFSIPLRNGGARNQAVSPRGAQTPLVSAYELAPEGRSPQITGLAPNLRPADIRYVGVTGSYLARGWEGNNTVIFFGLAGYGAWATPNEVQYRVYISTTGPDGSGPPDDIPEFVLVNTSLGAILPVSGTSGFTRPNDVFRAILYQIQPDGTLTVLRLTDWNFIPPPSLAPFLDSAPFDTSVMALATTAGFLGLSPATPVFKYYVETYARDAGEFTERIDRVPASGAITYDLRSPAAAPLNTLPDAGVVRAGLPTPFFFGIDGAQITGVVNQDALASRRTQDVLLLYHHNPADAQTEVITLHSTRLASTAPPEPYRIFLPIVTTP

Crispr_ID: NC_009767_84

• CRISPR_ID: NC_009767_84
• CRISPR_location: 4536243-4536359
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_84

Consensus_repeat	Method
CCGCCGCTCTCGGCATCGAGTGGAGGCGACCCGGCGGCTGTT	CRISPRCasFinder

spacers of NC_009767_84

>84.1|4536285|33|NC_009767|CRISPRCasFinder
ATCCTCTGTGCATCCTCTGTGGCGTTTTGCGCG

CRISPR arrays and Neighbor proteins around NC_009767_84

CRISPR arrays

The CRISPR arrays of NC_009767_84

>merge|NC_009767|84|4536243-4536359|CRISPRCasFinder
CCGCCGCTCTCGGCATCGAGTGGAGGCGACCCGGCGGCTGTTATCCTCTGTGCATCCTCTGTGGCGTTTTGCGCGCCGCCGCTCTCGGCATCGAGTGGAGGCGACCCGGCGGTCTGT

>NC_009767|84|75|4536243-4536359|CRISPRCasFinder
CCGCCGCTCTCGGCATCGAGTGGAGGCGACCCGGCGGCTGTT	ATCCTCTGTGCATCCTCTGTGGCGTTTTGCGCG
CCGCCGCTCTCGGCATCGAGTGGAGGCGACCCGGCGGTCTGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012121944.1|4531308_4532391_-|isocitrate/isopropylmalate-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|223549
NC_009767.1|WP_012121952.1|4540638_4541973_+|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl|CDD|223252
NC_009767.1|WP_012121949.1|4538993_4539974_+|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl|CDD|236686
NC_009767.1|WP_012121939.1|4526067_4526871_-|[LysW]-aminoadipate-kinase	unknown	unknown	gnl|CDD|237599
NC_009767.1|WP_012121947.1|4534621_4535881_-|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl|CDD|234748
NC_009767.1|WP_041331044.1|4526867_4528373_-|pyruvate-carboxyltransferase	unknown	unknown	gnl|CDD|163685
NC_009767.1|WP_012121955.1|4544035_4544425_+|hypothetical-protein	unknown	unknown	gnl|CDD|370070
NC_009767.1|WP_041332126.1|4539999_4540197_+|hypothetical-protein	unknown	unknown	gnl|CDD|273499
NC_009767.1|WP_012121943.1|4531126_4531294_-|lysine-biosynthesis-protein-LysW	unknown	unknown	gnl|CDD|260118
NC_009767.1|WP_012119472.1|4524443_4525802_-|hypothetical-protein	unknown	unknown	gnl|CDD|379252
NC_009767.1|WP_012121941.1|4529222_4530269_-|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl|CDD|234761
NC_009767.1|WP_157042861.1|4540228_4540642_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121953.1|4542199_4543627_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012121956.1|4545064_4546726_+|DUF1800-domain-containing-protein	unknown	unknown	gnl|CDD|378055
NC_009767.1|WP_012121946.1|4533112_4534231_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|236104
NC_009767.1|WP_012121945.1|4532387_4532888_-|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl|CDD|184460
NC_009767.1|WP_012121954.1|4543631_4544042_+|holo-ACP-synthase	unknown	unknown	gnl|CDD|234610
NC_009767.1|WP_012121948.1|4538011_4538569_+|peptide-deformylase	unknown	unknown	gnl|CDD|234668
NC_009767.1|WP_012121957.1|4546734_4548054_+|DUF1501-domain-containing-protein	unknown	unknown	gnl|CDD|226587
NC_009767.1|WP_012121942.1|4530265_4531123_-|lysine-biosynthesis-protein-LysX	unknown	unknown	gnl|CDD|273994

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012121944.1|4531308_4532391_-|isocitrate/isopropylmalate-dehydrogenase-family-protein	gnl|CDD|223549	COG0473, LeuB, Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism].	5.19345e-152
NC_009767.1|WP_012121952.1|4540638_4541973_+|type-I-glutamate--ammonia-ligase	gnl|CDD|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	2.47693e-178
NC_009767.1|WP_012121949.1|4538993_4539974_+|signal-recognition-particle-docking-protein-FtsY	gnl|CDD|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	4.01718e-157
NC_009767.1|WP_012121939.1|4526067_4526871_-|[LysW]-aminoadipate-kinase	gnl|CDD|237599	PRK14058, PRK14058, [LysW]-aminoadipate/[LysW]-glutamate kinase.	1.37519e-148
NC_009767.1|WP_012121947.1|4534621_4535881_-|3-isopropylmalate-dehydratase-large-subunit	gnl|CDD|234748	PRK00402, PRK00402, 3-isopropylmalate dehydratase large subunit; Reviewed.	0
NC_009767.1|WP_041331044.1|4526867_4528373_-|pyruvate-carboxyltransferase	gnl|CDD|163685	cd07948, DRE_TIM_HCS, Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain. Homocitrate synthase (HCS) catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, the first step in the lysine biosynthesis pathway. This family includes the Yarrowia lipolytica LYS1 protein as well as the Saccharomyces cerevisiae LYS20 and LYS21 proteins. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	8.15213e-33
NC_009767.1|WP_012121955.1|4544035_4544425_+|hypothetical-protein	gnl|CDD|370070	pfam08695, Coa1, Cytochrome oxidase complex assembly protein 1. Coa1 is an inner mitochondrial membrane protein that associates with Shy1 and is required for cytochrome oxidase complex IV assembly. It contains a conserved hydrophobic segment (amino acids 74-92) with the potential to form a membrane-spanning helix. The N-terminus of Coa1 is rich in positively charged amino acids and could form an amphipathic alpha helix, characteristic of a mitochondrial presequence. A cleavage site for the mitochondrial processing peptidase is predicted adjacent to the presequence. Upon in vitro import into mitochondria, Coa1 is processed to a mature form, indicating that it possesses a cleavable presequence. The eukaryotic cytochrome oxidase complex consists of 12-13 subunits, with three mitochondrial encoded subunits, Cox1-Cox3, forming the core enzyme. Translation of the Cox1 transcript requires the two promoters, Pet309 and Mss51, and the latter has an additional role in translational elongation. Coa1 is necessary for linking the activity of Mss51 to Cox1 insertion into the assembly complex.	1.18197e-18
NC_009767.1|WP_041332126.1|4539999_4540197_+|hypothetical-protein	gnl|CDD|273499	TIGR01206, lysW, lysine biosynthesis protein LysW. This very small, poorly characterized protein has been shown essential in Thermus thermophilus for an unusual pathway of Lys biosynthesis from aspartate by way of alpha-aminoadipate (AAA) rather than diaminopimelate. It is found also in Deinococcus radiodurans and Pyrococcus horikoshii, which appear to share the AAA pathway. [Amino acid biosynthesis, Aspartate family].	0.000813309
NC_009767.1|WP_012121943.1|4531126_4531294_-|lysine-biosynthesis-protein-LysW	gnl|CDD|260118	cd13946, LysW, Lysine biosynthesis protein LysW. LysW functions as a carrier protein in the biosynthesis pathway of lysine. The C-terminal glutamate sidechain of LysW attaches to the amino group of alpha-aminoadipate (AAA); this peptide bond formation is catalyzed by the ligase LysX. AAA remains associated with LysW throughout its biosynthetic conversion to lysine. LysW also acts to protect the amino group of glutamate in arginine biosynthesis.	7.86192e-17
NC_009767.1|WP_012119472.1|4524443_4525802_-|hypothetical-protein	gnl|CDD|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.60291e-25
NC_009767.1|WP_012121941.1|4529222_4530269_-|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl|CDD|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	6.05897e-157
NC_009767.1|WP_012121956.1|4545064_4546726_+|DUF1800-domain-containing-protein	gnl|CDD|378055	pfam08811, DUF1800, Protein of unknown function (DUF1800). This is a family of large bacterial proteins of unknown function.	7.41227e-148
NC_009767.1|WP_012121946.1|4533112_4534231_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|236104	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional.	4.51958e-179
NC_009767.1|WP_012121945.1|4532387_4532888_-|3-isopropylmalate-dehydratase-small-subunit	gnl|CDD|184460	PRK14023, PRK14023, homoaconitate hydratase small subunit; Provisional.	5.18376e-105
NC_009767.1|WP_012121954.1|4543631_4544042_+|holo-ACP-synthase	gnl|CDD|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	8.78725e-43
NC_009767.1|WP_012121948.1|4538011_4538569_+|peptide-deformylase	gnl|CDD|234668	PRK00150, def, peptide deformylase; Reviewed.	3.1074e-68
NC_009767.1|WP_012121957.1|4546734_4548054_+|DUF1501-domain-containing-protein	gnl|CDD|226587	COG4102, COG4102, Uncharacterized protein conserved in bacteria [Function unknown].	1.41575e-41
NC_009767.1|WP_012121942.1|4530265_4531123_-|lysine-biosynthesis-protein-LysX	gnl|CDD|273994	TIGR02144, lysine_biosynthesis_enzyme, Lysine biosynthesis enzyme LysX. The family of proteins found in this equivalog include the characterized LysX from Thermus thermophilus, which is part of a well-organized lysine biosynthesis gene cluster. LysX is believed to carry out an ATP-dependent acylation of the amino group of alpha-aminoadipate in the prokaryotic version of the fungal AAA lysine biosynthesis pathway. No species having a sequence in this equivalog contains the elements of the more common diaminopimelate lysine biosythesis pathway, and none has been shown to be a lysine auxotroph. These sequences have mainly recieved the name of the related enzyme, "ribosomal protein S6 modification protein RimK". RimK has been characterized in E. coli, and acts by ATP-dependent condensation of S6 with glutamate residues.	1.87525e-114

Protein sequences

>NC_009767.1|WP_012121947.1|4534621_4535881_-|3-isopropylmalate-dehydratase-large-subunit
MGQTLAEQILSRAAGRPVSAGENIVARVDLAMMHDSISPSIIKILHQELGAEQVWDRDRVAVVVDHVAPAATIQNAEHQLALRRWVRQQQITHFFDVGRGISHPVLVEEGLARPGMLILGSDSHSTAYGAVGAFGAGMGSTDMALALATGQTWLRVPETVRILARGRFRPGVGAKDLGLRVARLIGADGATYQSVEWHGVEELSVGERMTLATLSIEIGGKAGIIPPTGPGWEEHAARRGIIAPSWLCVEEGARYSRTVEVDLDTLEPQISVPHFVDNVRDLSELGRVEVDVVYIGTCTNGHANDMAAAARILKGRKVARGVRLLVVPASSEALQQATADGTLATLLEAGAAIGTPGCGACIGRHMGVLAPGEVCLFTGNRNFRGRMGSPEAQIYLASPEVAAATAVLGYIAHPAEVMR
>NC_009767.1|WP_012121946.1|4533112_4534231_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MHPETASIHAGQEIDPTTGAVIPPIYLTTTFERASDGSFPRGYIYTRNGNPNRAMLETCLAALEGGATCVAFSSGLAAAMSVFQALRPGDHVIAPDDAYHGITRLLREIMAPWGLEYSRVDMRDPQNVAAALRPNTRLVWIETPSNPLLKIADIAAIAEIARQAGALCAVDNTWATPVQQRPLELGADIVMHATTKYIGGHSDVLGGAVVFGANDAFAERVRFLQINGGAVPSPFDCWLALRGIQTLPYRVRAHAANAIQVARFLAEHPRIERVHYPGLETHPGHAVAARQMRGFGGMLSIEVEGGEAEAMAVAAKVKIITRATSLGGVESLIEHRASVEGPESTTPPNLLRISVGLEHPDDLIADLAQALT
>NC_009767.1|WP_012121945.1|4532387_4532888_-|3-isopropylmalate-dehydratase-small-subunit
MARIWRFGANINTDQIVPGRYAPYMLKNEDELRNYPFIEARPEFASTVRPGDLIIAGPNFGCGSSREYAPLALKMVGIGAIIAPLFARIFYRNALNLGIPLFEADLTDQLEDGQEVEFNAETGVIVADGRAIQLPPPPEWMREVWREGGIVPFYRKHRRFPGVVPV
>NC_009767.1|WP_012121944.1|4531308_4532391_-|isocitrate/isopropylmalate-dehydrogenase-family-protein
MSAPPFTILVIPGDGIGREVIPAAVAVLQATNLPLQFVEADAGWDCFQRCGDALPHETLDAARAADAVLFGAVASPSYPVAGYRSPIVRLRRELDLYANIRPVFDDPPPGDPRARRVDLAVVRENTEGLYAGRERVEDGGATAIAERVITRRASERIARVAFELARARRAARRADDAPPGRVTIVHKANVLRETCGLFRTIALDVAQAYPDVQADEMLVDACALHLATRPERFDVIVTTNLFGDILSDVACAWGGGLGLAPSANLGERHALFEPVHGAAPDIAGKGIANPLAAIGCAALLLDHLASRASPDTASAIRAWSERIRRAVRHVRAVGPHTPDLGGDAATSETTAAVIAHMLTL
>NC_009767.1|WP_012121943.1|4531126_4531294_-|lysine-biosynthesis-protein-LysW
MRAICPECEAEITLPEGTVEGEILTCPDCAAELEVVSIDPPELALAPEVEEDWGE
>NC_009767.1|WP_012121942.1|4530265_4531123_-|lysine-biosynthesis-protein-LysX
MRVGVLCSRIRVEEKLLFAELERRGVAYERIDDDDVIFDLNEGRYEYDVVLERSIHHSRALYALKVFNDAGVPTVNTAYVADICGDKFKTTQALIRAGVPTPRTRMAFTPESALRAIEDLGYPAVLKPAIGSWGRLIAKVNDREAAEALLEHKQILGSYHHSIFYIQEYIPKPYRRDIRAFVVGDECICAIYRTSDHWITNTARGGQATVCPVTPALADLCVSAAYAVGGGVVAIDVLEAPDGRLLVNEVNYTMEFRNSIAPTGVDIPARIIDYTLDVARKGSVS
>NC_009767.1|WP_012121941.1|4529222_4530269_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MSVRVSIVGGSGYVGGELLRLLLFHPQVVVAQATSERLAGKPITTAHPNLRGIPAARELQFTSQDRLTPCDVLLLALPHGDAARAIDHFARLAPKIIDCSADFRLRDPSVYARWYGEHHPAPHWLERFVYGLPELHRDAIRSASYVSGVGCNATAAILALLPLARAGLIDPGRDVIVEVKVGSSEGGAQPNEASHHPERSGAVRSFAPVGHRHTAEVIQELGVEHVHLSITSVELVRGALATAHAFAGGTVCEKDLWRAFRATYGSEPFVRIVREKQGVYRMPEPKILAGSNYADVGFAVDEETGRIVSICAIDNLMKGAAGTAVQCLNLMCGFDERLGLEFPGLHPI
>NC_009767.1|WP_041331044.1|4526867_4528373_-|pyruvate-carboxyltransferase
MSPIPDFLHNENPAQPRYHEALELLALFDYLKAMRWGVFSIRESLQAVGECRDGTLQGFHLTVDEAWEAVRGMDSLGVGVIELPSFPANPPGQAFNRRLLERAAAHGLTTTFAAHARCVAADIRTAAETGFRRLHLYIGVSPIKQATAHANAVQLADKAFDAIHLARDLGFDCVRISTEDAYRTPLDDYCAFYERLQERLTSHGLHVDGIGIPDTVGVGTIDDLGDRIAVLRQVGIRFVFLECHIHNDIGHSDRLYVDTLLLCMRLGIMMLPDFSILGIGERNGTIGLSSLIEAIYRRLLLLYPRSMPAIRQAVREKLGVLPDGELFVNRYRDLDAFFYRILARSGFVFDRSPFSSNTEYDGSGVHADTTLRAFRLAREQGYDGQQAIDLGNSAYAGALPPYDMPLRTPVLACFGCGKSNVRFWRERERLVLRRPEDIRARIVPYADDLAEDSHHIPTDETTADELAARLIRCASVREGGINHHQAMEIIRLFYRSAEASE
>NC_009767.1|WP_012121939.1|4526067_4526871_-|[LysW]-aminoadipate-kinase
MIVVKVGGGAGIAYDALCADLATLTRAGQRLVLVHGGSHETNTLAERLGHPPRFVTSPSGYTSRYTDRATLELFLMATAGKVNKVIVERLQHLGVNAIGLSGLDGRLLEGQRKAVIRIVEDGKQKVLRDDWTGTVEKVNTHLLTLLLNAGFLPVIAPIAASDAGEALNVDGDRAAAAIAAALGANTLILLTNVPGLLRAFPDESTLVRHIPRADIEEYLPLAQGRMKKKILGASEALAQGVGRVILGDARVAEPITRALAGEGTVIV
>NC_009767.1|WP_012119472.1|4524443_4525802_-|hypothetical-protein
MRNLPRAIIPVLRKFELLFSERVWEWAKILLIGAILAPGKRTVTSALRVMGLSDDAQFQNYHRVLNRAVWSPYAASRILLRLLVDAFVPSDTAIVLGLDDHIERRRGAKIKAKGIYRDPVRSSRSFFVKTSGLRWLCLMLLAPIPWAQRVWALPFLTVLAPSERCHQELGKRHKQLTDWARQIIFQVRQWLPERVLVVVADSSYAALELLAACQGLPNPVTVVTRLRLDAALYDTAYVHPAGRPGRPRKKGARQPTLEQRLSDPTTDWQHTSVRWYGGTTRTVRLASATAVWYHSGLPPVSIRWVLITDPDGKFEAQALLSTNPAATPKEIVEWFVMRWQVEVTFEEARAHLGIETQRQWSDLAILRTTPVLLGLFSLVTLFAHHLLQAGELPVRQAAWYTKALPTFSDTLAFVRKQLWPVTISWMSPAEADMVKIPKSLLVRLTDALAYAA
>NC_009767.1|WP_012121948.1|4538011_4538569_+|peptide-deformylase
MGLRHILRIDNPDEKKILTTRCHPVRMPNPSLKQLVADMFETMHAANGVGLAAPQIGVTQRLAVIAIPPMMEERPDGTKVEVAPEQTFVLINPEIVKASDQEDVGLEGCLSLPGWYGEVPRAAWVTVEYTDLNGRRQRIRRATGLLARALQHEIDHLDGVLFTERIRDLSTLKSYSEEEAPATTG
>NC_009767.1|WP_012121949.1|4538993_4539974_+|signal-recognition-particle-docking-protein-FtsY
MGFFKRMFGRGQDAPRSEEEARQEEQKIDRATAKARHGLFGQIASLFATDEPITDELWDDLEALLIQADVGVETTMYLVNRTKDRCNRYGVKRAREARDMLKAEMVRVLQEQERRQPVNANPSIVLVVGVNGAGKTTLIAKLAYRLKNQFGKRVLLAAGDTFRAAATEQLETWAERVGVPVISRGQGADPGAVVYDAIEAVSGGDFDVLIIDTAGRLHAKTNLMLELQKLRNIIRRKFPDAPHEVLLVIDATTGQNGVLQAKSFLKAVDVTDVAVTKLDGTAKGGIAFAIAQDIERPIRYVGTGEKMTDLALFDAETFVESLFAQD
>NC_009767.1|WP_041332126.1|4539999_4540197_+|hypothetical-protein
MPLETTKCPVCGRKLALQEYVTPGTRLVCTDCESNLYVEARRPLRLKPVPEEATYNANDRPESYG
>NC_009767.1|WP_157042861.1|4540228_4540642_+|hypothetical-protein
MRMALIGILASLFASACMLVSGDRLSADVRPDAGNVTRAFLGAEGSEEYALPIGGGAATLRTIVILEVQQGEMRLEMLNPGGSVAFAVQSRPGDQVSRVGAVRLDETGTLRYRVITRGARDGAYQILYQRVRSGNDQ
>NC_009767.1|WP_012121952.1|4540638_4541973_+|type-I-glutamate--ammonia-ligase
MTVSRETVLKQAAERNVEFVSLQYTDIVGMVKNVTIPISELPDCLDHGVWFDGSSLEGFARVAESDMYLVPDLETFAIIPWDEAAGFVTARMICDVQTPEGKPFAGDPRYALRRALDAAQRMGMTFYVGPEVEFFLFRAGPDGRPALIPHDVAGYFDATTDAATHIRRRMVRALSAFGIEVEATHHEGALGQHEIDLRHTEGLRAADHLVTTRATLKAVAQHHNLYATFMPKPIAHLNGNGLHMHLSLADATSGKNLFFDAHDPYSISKLARHFIAGLLAHARGMIAVLAPLVNSYKRLVPGFEAPVYLIWGRTNRAQLVRVPRISTNRPQSARVELRCADPSCNPYLALAVILAAGLDGIRRELPLPPPVEEDLFEVDLRARQFDVLPSTLGVALEELQRDEVITETLGPHILERFVEARAREWEEYSHSISQWELDRYLPTY
>NC_009767.1|WP_012121953.1|4542199_4543627_+|hypothetical-protein
MAPIAKPSPEQTYYQRVAWTWMLAFFGLFCALVAVVGYSGWRSYETATTPVEGAILRSHVNAGVSIQPRGRLVAESIERLPPERDPCPGELDICAIVAEGSVIRTKAEAGYGPVASLVLVDRTQIDFWAHPDGAELALVSYRATTWHNGRLDVTLRQNAGYLRYDIAAGQPYDQVEYVVEVGDGTRIRLDPGGSYSVNVLNGSARPLPPLALNGEPLWIEVATRSGRAIVDHQGGSVEVQPGQLAQIDAAGTLAEPGEARWELIRDGGFEQYLAQNQYDQTSQTWRKYAIPNAPGMTPEEHNGRFAVVRSCRPETPDFCSPDDQVAIGQFRRDGLQTRPFTVGIEQTIDADVSEFPSLRLTMWVRVLTQTVQLAGVAGSECPIMVRITYKPTSPTDQELSRYFCIYTGNGEVSNSEDAGEIRYRQVPQFQWYRLNVELRDDSLLRQARYIQSIRIEARGHDYLSEVTAISLIGRQ
>NC_009767.1|WP_012121954.1|4543631_4544042_+|holo-ACP-synthase
MIYTGIDIVAVDRIRRAVERWGDRFIQRIFSTAETALCHGRTESLAARWAAKEAVAKLLGVGLRGIGGAGGVAFHDIEALADAHGRPMVILRGAAQARARELGIDSIRLSLSHDHGLAIAIAIALSSPTPRRRMPW
>NC_009767.1|WP_012121955.1|4544035_4544425_+|hypothetical-protein
MVSVRGCNPISCFISALLFVLIGACVGGVFFVVIRSIRDSDVVQEALVRAERDPQVAAALGAPLEAGWFPMGSISTGDGSGNANLTLSVAGPRGSGEMMIEAVHREGVWQYRRLIVTVGGRQIDVLREQ
>NC_009767.1|WP_012121956.1|4545064_4546726_+|DUF1800-domain-containing-protein
MTFSRRRFLGAGATLAGARMSGVPTQVTPSTLPPIELIALNRIAYGPRPGDIGRVQGMGFAAYVDEQLNPNDADDALCNQKIAEARLRIQYNAGMGYPAVDEMRPLRTIVENWSLTQLWSLSKNPAYQERIRPVEEVRAATLLRAVYSKWQLREVLVEFWHNHFNVDAYSDSRISATWTLYDRDVIRRHCLGNFRSMVRDVAKSIAMGFYLDNAFSRDGPANENYARELFELHTLGQENYLNHLYNRWRDVPGALEGNPVGYIDQDVYEAARAFTGWTIAHGQTVSGNIRLPDTGEFAYVDLWHDNAQKRVLAFEIDPNQPPLSDGETVIRLVSEHPGTARHICRKLCRRLLADDPPDSLVNALASVWLTHKNAPDQIARTVRALLLSDEFANTFGSKVKRPFEVIVSFLRATNADVTPNSGLFWQLQEMGYRMFNWGPPTGHPEESAAWLSTNGMLRRWNIINQLQSTWLKAATFDLPGQTPAGLTSRQIVEFWIARLLAIAPPPSTINRLVDLMRQNGSADAPPTGSAEEMTDRIRSVVTLIAMTPEFQLR
>NC_009767.1|WP_012121957.1|4546734_4548054_+|DUF1501-domain-containing-protein
MTLSRRNFVVGCSAAIAALTGGAVRGLAFAQPGDTTHRDILVVVFLRGGCDGLSLVAPVNDPFYRGARGDLRVEESGQNAGLRFGNPIPGADFRLHPRATPLLSLYINRSLAIVHACGLRNGTRSHFEAMDYMEGGIPESGVPANGWLARYLNGINASGYLPAVSASARIPFSMTGFNDAAALTDPGAFNLSWNSWRYRSQLDQALDSFYSGDSPVQRAGRTTLTTIARINERLPRDSQGRVIPYTPENGAVYPGGRGASLGSALRTVAGLIKMDVGLIAATVDYGGWDTHEGQSWIFPELVAGLSEALYAFYNDLWRYHHRLTIVVMSEFGRRLKANRSSGTDHGHGNVMLALGEGIRGGKMYGVWPGLATEQLDNGVDLAITTDYRAVLSEILVKRGGHQAVDQVFPGFSGSPLGLAYAPGETIERPQRVNLPLVTR

Crispr_ID: NC_009767_85

• CRISPR_ID: NC_009767_85
• CRISPR_location: 4732818-4732890
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csa3

Consensus repeat of NC_009767_85

Consensus_repeat	Method
CGTAGCCGGTCGAAGCAATCCCC	CRISPRCasFinder

spacers of NC_009767_85

>85.1|4732841|27|NC_009767|CRISPRCasFinder
CCGCCCCAACGAGTCATCGCGCGCCGC

CRISPR arrays and Neighbor proteins around NC_009767_85

CRISPR arrays

The CRISPR arrays of NC_009767_85

>merge|NC_009767|85|4732818-4732890|CRISPRCasFinder
CGTAGCCGGTCGAAGCAATCCCCCCGCCCCAACGAGTCATCGCGCGCCGCCGCAGCCGGTCGAAGCAATCCCC

>NC_009767|85|76|4732818-4732890|CRISPRCasFinder
CGTAGCCGGTCGAAGCAATCCCC	CCGCCCCAACGAGTCATCGCGCGCCGC
CGCAGCCGGTCGAAGCAATCCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122088.1|4726806_4727763_-|D-2-hydroxyacid-dehydrogenase	unknown	unknown	gnl|CDD|240625
NC_009767.1|WP_041331096.1|4731716_4732067_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122091.1|4729351_4729591_+|thioredoxin-family-protein	unknown	unknown	gnl|CDD|379063
NC_009767.1|WP_041331103.1|4744243_4744933_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122087.1|4725482_4726772_-|alpha-L-fucosidase	unknown	unknown	gnl|CDD|376461
NC_009767.1|WP_012122098.1|4735168_4736410_+|MFS-transporter	unknown	unknown	gnl|CDD|340863
NC_009767.1|WP_012122085.1|4723858_4724476_-|NADP-oxidoreductase	unknown	unknown	gnl|CDD|224996
NC_009767.1|WP_012122095.1|4732991_4733651_-|glutaredoxin	unknown	unknown	gnl|CDD|274021
NC_009767.1|WP_012122097.1|4734733_4735168_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042700.1|4745062_4745581_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122100.1|4737674_4738868_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl|CDD|99740
NC_009767.1|WP_012122102.1|4740930_4741698_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|377965
NC_009767.1|WP_012122092.1|4729683_4730739_+|permease	unknown	unknown	gnl|CDD|223773
NC_009767.1|WP_012122089.1|4727794_4728529_-|metal-dependent-hydrolase	unknown	unknown	gnl|CDD|234811
NC_009767.1|WP_012122093.1|4730838_4731594_+|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl|CDD|376667
NC_009767.1|WP_012122101.1|4738851_4740069_+|AmmeMemoRadiSam-system-protein-B	unknown	unknown	gnl|CDD|153373
NC_009767.1|WP_083760339.1|4736488_4737187_-|DUF3592-domain-containing-protein	unknown	unknown	gnl|CDD|378822
NC_009767.1|WP_157042699.1|4733720_4734446_-|GlcNAc-PI-de-N-acetylase	unknown	unknown	gnl|CDD|274915
NC_009767.1|WP_012122086.1|4724472_4725477_-|ATPase	unknown	unknown	gnl|CDD|225518
NC_009767.1|WP_012122090.1|4728975_4729344_+|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|238042

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012122090.1|4728975_4729344_+|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	5.8e-17	56.9	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122088.1|4726806_4727763_-|D-2-hydroxyacid-dehydrogenase	gnl|CDD|240625	cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants.	1.65902e-141
NC_009767.1|WP_012122091.1|4729351_4729591_+|thioredoxin-family-protein	gnl|CDD|379063	pfam13192, Thioredoxin_3, Thioredoxin domain.	1.28546e-28
NC_009767.1|WP_012122087.1|4725482_4726772_-|alpha-L-fucosidase	gnl|CDD|376461	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase.	1.18403e-109
NC_009767.1|WP_012122085.1|4723858_4724476_-|NADP-oxidoreductase	gnl|CDD|224996	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only].	2.46357e-41
NC_009767.1|WP_012122095.1|4732991_4733651_-|glutaredoxin	gnl|CDD|274021	TIGR02187, glutaredoxin-like_protein, Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.	7.06712e-68
NC_009767.1|WP_012122098.1|4735168_4736410_+|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.71915e-69
NC_009767.1|WP_012122100.1|4737674_4738868_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl|CDD|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	3.38215e-142
NC_009767.1|WP_012122102.1|4740930_4741698_+|SH3-domain-containing-protein	gnl|CDD|377965	pfam08239, SH3_3, Bacterial SH3 domain.	3.67084e-10
NC_009767.1|WP_012122092.1|4729683_4730739_+|permease	gnl|CDD|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	1.79171e-69
NC_009767.1|WP_012122089.1|4727794_4728529_-|metal-dependent-hydrolase	gnl|CDD|234811	PRK00685, PRK00685, metal-dependent hydrolase; Provisional.	2.7709e-90
NC_009767.1|WP_012122093.1|4730838_4731594_+|sulfite-exporter-TauE/SafE-family-protein	gnl|CDD|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	3.59433e-21
NC_009767.1|WP_012122101.1|4738851_4740069_+|AmmeMemoRadiSam-system-protein-B	gnl|CDD|153373	cd07361, MEMO_like, Memo (mediator of ErbB2-driven cell motility) is co-precipitated with the C terminus of ErbB2, a protein involved in cell motility. This subfamily is composed of Memo (mediator of ErbB2-driven cell motility) and similar proteins. Memo is a protein that is co-precipitated with the C terminus of ErbB2, a protein involved in cell motility. It is required for the ErbB2-driven cell mobility and is found in protein complexes with cofilin, ErbB2 and PLCgamma1. However, Memo is not homologous to any known signaling proteins, and its function in ErbB2 signaling is not known. Structural studies show that Memo binds directly to a specific ErbB2-derived phosphopeptide. Memo is homologous to class III nonheme iron-dependent extradiol dioxygenases, however, no metal binding or enzymatic activity can be detected for Memo. This subfamily also contains a few members containing a C-terminal AMMECR1-like domain. The AMMECR1 protein was proposed to be a regulatory factor that is potentially involved in the development of AMME contiguous gene deletion syndrome.	2.35471e-58
NC_009767.1|WP_083760339.1|4736488_4737187_-|DUF3592-domain-containing-protein	gnl|CDD|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	9.66971e-27
NC_009767.1|WP_157042699.1|4733720_4734446_-|GlcNAc-PI-de-N-acetylase	gnl|CDD|274915	TIGR04001, thiol_BshB1, bacillithiol biosynthesis deacetylase BshB1. Members of this protein family are BshB1 (YpjG), an enzyme of bacillithiol biosynthesis; either BshB1 or BshB2 (YojG) must be present, and often both are present. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	2.82696e-42
NC_009767.1|WP_012122086.1|4724472_4725477_-|ATPase	gnl|CDD|225518	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism].	1.79736e-38
NC_009767.1|WP_012122090.1|4728975_4729344_+|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	3.43089e-16

Protein sequences

>NC_009767.1|WP_041331096.1|4731716_4732067_+|hypothetical-protein
MRATLSGGEARGARHEAGGGGALSSVGFFGWFGISGKGFCRRGRLLRRYACPTSWRGRVTGFTAGERQIDGRLPARWDAAATETLMLTDLPPDAAETVWYGMRAGVEGSDQDATSQ
>NC_009767.1|WP_012122093.1|4730838_4731594_+|sulfite-exporter-TauE/SafE-family-protein
MSYVILTLLLFILSFLSGMMGLGVAFIATPTLGLFGLDLKHEIMPLSLWLNGITAITGAITLARKGMVDWRTALPLLAITTLVAPIGVWLLQFVSTTTIWWIYVGVLFFLAYRMAFPPPQDDSAPRSIGDDVRVKAGAASAAIGVFAGFLGVGPGFLMMPTLVLLGYNARIAAATNAVIVTLPSFSAFAAHLIDARFDWLLLGLTSVSAIIGAQSGAAFMARRVKSLTLTRIFAAALVLLALQRTWSLVVA
>NC_009767.1|WP_012122092.1|4729683_4730739_+|permease
MEQTLSALSLRHSSRRAWGIVAVAAVGWLIAYNLIQPLAHWLAYRVLGFAEGSQAGEALAFFLYDVPKILLLLSGMIFGISVLRSFFSPERTRALLGGKREGIGNALAAGLGVLTPFCSCSAVPLFIGFVEAGIPLGVTFSFLIAAPMVNEVALAMLLGMFGWQVALLYLVAGMSVAILSGIVIGRLRLERYVEDFVWQIKGGGGAVAGEAPTWAERFAFAWENTREIVGKVWLYVVIGIAIGAGIHGYVPEEALSGILGREAWWSVPAGVILGVPLYSNAAGVIPVVQALMAKGAALGTALAFMMAVVALSLPEMIILRRVLKPQLIAVFIGVVAVGIMMVGYLFNLVMG
>NC_009767.1|WP_012122091.1|4729351_4729591_+|thioredoxin-family-protein
MLNIKVLGSGCANCRKLEERVRNVIRQRNLTAEIEKVTDYAQMMRWNVMRTPGLVINDVLVASGRIPTEEEIGSWLKVG
>NC_009767.1|WP_012122090.1|4728975_4729344_+|winged-helix-turn-helix-transcriptional-regulator
MIGAMAHVTIDKQAQLFKALMHPVRIQILEILRGGEACVCHIEAMLGLRQAYVSQQLAVLRRFGLIKDRRDGSNIYYRVIRREVFDMLDTARAIVGDEEKPATRRATGCSCPRCVPHIARIE
>NC_009767.1|WP_012122089.1|4727794_4728529_-|metal-dependent-hydrolase
MATIGRDTTISWLGHGTFHIQTPGGKKILIDAWVDGNPVCPDEWKQRVRSEGLDAIFLTHGHFDHIADILDLATATNATIVGQFDITSWLASKGVGQDRLVGFNKGGTVEVAGIRATMTHATHSSTFTDNGIIVPMGTEAGYVLRMENGFVMYHTGDTAVTMDMQIIGDLYRPELVFLPIGDHFTMDPMQAAYALKLIRPKFAIPEHYGTFPILRGTPDQLREQCSAFGVDVTVIDLKPGESVS
>NC_009767.1|WP_012122088.1|4726806_4727763_-|D-2-hydroxyacid-dehydrogenase
MKLLIPQALAPLIEPRLAEMAPDLEVVRFDDAGEPEGDVCDVTMLLRWWTPVSALRRVLAAAPNLRWIHTPSAGVEHLLIPEILERDIVLTNSAGAQAIPIAEFVLMYMLNHVKRAFDLKALAPDEWDRGDDIPCDELFERTLLIIGYGHIGAEIAKRARAFGMRILASRRHPQPTDGVDVMVGEHGWRDLLPQSDYIVLAVPLTAATRGMFDADAFRRMKSSAYLINIARGQIVDTDALLEALHSGRIAGAALDALPIEPLPPDHPLWKAPNVWITPHISYSSPRTRERIIDIFCENLRRYRTGEPLLNVVDKAAGY
>NC_009767.1|WP_012122087.1|4725482_4726772_-|alpha-L-fucosidase
MLTPAPTRGDTSWFVHDRFGMFIHWGLYALAARHEWVKSREKIDDASYQRYFDHFDPDLYDPRAWARAAREAGMKYVVITTKHHEGFCLWDTQYTDYKAPNTPAKRDLLKPFVEAFRAEGLRIGFYYSLIDWHHPDFLIDVFHPLRDHPNVAQLNAGRDMRRYAAYMRNQVRELLTGYGSVDIIWFDFSYPNREYNGLPGKGRVDWESEALLRLVRDLAPDIIVNNRLDLPTEFADVHTPEQFQPREWVHVDGEPVVWETCQTFSGSWGYHRDEMTWKSPEQLIQMLVNSVACGGNLLMNVGPTARGTFDDRALAALKVYADWMRLHSRSIYGCTQSEFTAPTDCRFTQNGKRLYLHIFSWPFRHLHLDGMAGRVEYAQLLHDASEVRLLEPGKHNEWSIAQTAADTLTLELPVVKPRVTVPVVELFLR
>NC_009767.1|WP_012122086.1|4724472_4725477_-|ATPase
MSGRYVVGIDAGGSKTHALIADLEGRVVGGGESGPGNWEGVGLDGAFDAYARAIDAALRMAGINRTDICAAGYALAGLDWESDVARLESVIRRLDLPGPYTLVNDAFGALRAGSTDGCGVAVIAGTGSTVAGRNRRGATFRTFGLGMHWGDFHGAAGLVWEATRAIGHAWIGRGPATALSDAFVRAYGAVDVPDLVERVSRGAAPPPNGRLARLVFTVADAGDEVACRIVRQAGEELGLTAAAVVRKLALEHESFDLVLAGGVFRARNRLLIGALTEQVRRCAPMARVVRLEAPPVAGSLLLAFDAAGVPTPPALCVRLLAEAHHWFQTIGGME
>NC_009767.1|WP_012122085.1|4723858_4724476_-|NADP-oxidoreductase
MTTIALIGTGRMARGLGAGWVRAGHRIIFGSRVPDEKTDLIAALPAARVTTYADALEESAIVVLTLPYPDVAPFCRAHAAALRERLVIDISNPFDHLPDNRVAGAEVTRDAIGPGARVVAAFKTNFAATLLAPLNVDGVQRDVLFAGDDEEDKRIVAGLIADLGFRPVDCGVLHNARILDGMVPLIIELDRRYGGAWQTSWKLLP
>NC_009767.1|WP_012122095.1|4732991_4733651_-|glutaredoxin
MALLHDKDRKIVREQLEEGLKRPVTMAFFSSKENCELCDVTGELVEEVAGLHPLLRVETYDLQADAARAAELGVDKAPAIVILGGEAAQDYGVRFYGIPSGYEFVTLLEALRMVGSDTVELQPATRSFLNELKQPMHLQVFVTPGCPYCPRAGVLAHRLAYASPLITADVVEVTEFPDLGERYEVMGVPRTVIDDVVHIEGAAPESMVVGKLREALMAA
>NC_009767.1|WP_157042699.1|4733720_4734446_-|GlcNAc-PI-de-N-acetylase
MSYDVMVISAHPDDAEVQMGGTIALLTKQDKRVVLVDLCDGEPSDFAAPGVRAEQARRAAAHLGADRLFLNAQDRLITDTIHLRLAVARLIRIHRPAIVFATTDACVHPDHAAVGSLVSAAVFYARLDHWDRVPGGEALGDTRPWAVERLFYPHCKMEPPWGRDFAFAVDVSSVYDRKRAALAEYGSIFRIEEGHDRLLTLYEAEDAYVGRLFGVAYAEAFKSQSPLLVHSPTVFLPALHG
>NC_009767.1|WP_012122097.1|4734733_4735168_+|hypothetical-protein
MGAWSELDAVYPPGALTPGATLLAALAHLHSARSLYDERGALARFVPDARRGLALDRDLIDRIEQHLARVSFDAFVREARERLNYQQRRCLALNLLDAVLAAGERPEAHPRYRALIEGLGITAEMLDPYQHALVLKNDLSIFPQ
>NC_009767.1|WP_012122098.1|4735168_4736410_+|MFS-transporter
MTITPSQRSAFAARTFAALRHRNYRLWFFGQMVSLFGSWMQTTAQGFLVFQLTGSPAYLGYVGFAAGIPAWALTLYGGVVADRMPRRTLLIITQTAQMALAFALAALVFSGIVQPWHIVALSFLLGIANAFDAPARLAFVRELVDKEDLTNGIALNATMFNLATTTGPAMAGVTYTLVGPAWCFMLNGISFLAVIGALWRMRMAPQPVAPRSASAWRDLREGLSYILHEPVVRTLIALVGATSCFGISFATLFPAWAVRILGGDAATTGLLQSARGLGALLGALLIASLGRFQFKGRLLTVGTFAFPTLLIVLTFTTWLPLTLVLLTASGLAVILIMNLANALVQTLTPDALRGRVMAVYSMVFFGMMPIGALWIGVIAERAGEPTAVISGALVVLGVAALIRLAVPQIRKLT
>NC_009767.1|WP_083760339.1|4736488_4737187_-|DUF3592-domain-containing-protein
MPPSGHSERSDGSFRAQRRVIPSAARNLNGTRTTPRAARGDKRCRLRVIPSAARNLNGTRQTPRAARGDRAGWSQGIGIIAAAIGLGALYGGQMWRVHQQNQIATMVKAQGAVVEVVSRTRTQGEKRSTLHYAVVEFRTANGETIRFEDTMGSNPPAYRVGDAVEVLYDPQTPQSAMIDSWWIWMPSTIVMVVGGSFAVIGGLAWLDAFFNLIKPGGLLGLPGILLLRRRRG
>NC_009767.1|WP_012122100.1|4737674_4738868_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MAVLAVNGGSPVRTRPWPRWPQWDAREEQRVLDVLRSDDWGGFAPVVEEFERAFAQHHDTAFGIAAVNGTQTLVAALMAAGIGPGDEVIVPPYTFIATASAVRLVGATPVFADIEADTYNLDPDAAAAAITSRTRAIIPVHFAGHAADMDRFTTLAQRHHLLLIEDAAHAHGASWRGRKCGSLGDVGSFSFQSSKNMTAGEGGALTTNNRALADAIRSRVNQGRAIGGAWYEHPHLGTNMRLSAWQAAVLLAQLERLDEQTDRRMACARRLNAFFADVEGIQPMRWDERADRHAFHLYMVRYDERAFGVPRDRFEQALEAEGIPCSTGYPFPLYRQASLGAAFARAEACPNAEQACREAIWLPQWLLLADPDEMDDVATAIIKIRDHRDELRYAVVH
>NC_009767.1|WP_012122101.1|4738851_4740069_+|AmmeMemoRadiSam-system-protein-B
MLSSTDQYPKLRAIDIRRVMHDGQPSLLLRDPLQISDRFLVISQGLGPALLFCDGKHHRATIAGKLRSMLGVPVDSALVNRLVDALDEAFLLDNLRFREEHARALARYRAAPFRPPALAGQSYPADPAELRRLLDDFIAAVGPVAPAPPTGRGVLSPHIDYARGGRVYAQVWQRAAEMVRAAEIVLLIGTDHYSPEPVTLTRQRYATPLGVLPTDTSVVDALAAAIGEDAAFAGELYHRVEHSLELVAVWLQYIRGDAPCPVIPILAGSFARYMDGDDPATDPRFEALITALRRIIASRHAVVIISGDMSHVGPAFGGAPLSNADKEALRRADELVIDRMRAGDAAGFFRVIAETGDRQNICGLPPTYLALRLMDAVEGELTAYAQCPADDEETSVVSICGMVFG
>NC_009767.1|WP_012122102.1|4740930_4741698_+|SH3-domain-containing-protein
MSDMRSIIGVIALILALTGCGGIPLPGIGGAPTAVEQPTPPIDTTTPVVTDTATLQPSPEVTPTLAATTVAEAPLPPVTMPEPTTPVVLSPSLTATVAAPTDTPGPTEEPLYLQPSPIPGLPTAPLPTDTPTPSATPTATPVASPTPDANMTPSPTPTPTYPPVPIVSSLRGTVANPGNVRADPNVSATPIDRVNQGEEVQLLGRSDNGRWYLVLTVRGVAGWVSATLLNVPPETAVLVPVNPDIALPTPPGGTP
>NC_009767.1|WP_041331103.1|4744243_4744933_+|hypothetical-protein
MPGVHTIRDRLHVVWKRTRASRRSPAPEDDDQRAVIAVLLVRLHAAPERSRLGFLDAVPIARQPTLTTADAVRGDDQVRAYLRQRATTLARVGATLDGRTVQVGVRRATRSTAPTLALCAQALRATDLAVACIDVGHDPWTEHPHPDRLVVWEPHPTPAPCYRLSHWSTKPSAAASRKRGPVAVTDPAGAVADVCLVGSSESRSWGARCGKPCPPAALGGRSPPAARRG
>NC_009767.1|WP_157042700.1|4745062_4745581_+|hypothetical-protein
MHDLSQGVSPQRRTTPQPRRGLHDLSQGVSPQRRTTPQPRRGLHDLSQGVSPQRRTTPQPRRGLHDLSQGVSPQRRTTPQPRRGLHDLSQGVSPQRRTTPQPRRGLHDLSQGVSPQRRTTPQPRRGLHDLSQGVSPQRRTTPQPRRGLHDLSQGFSPQRHAPPHSPAGACTT

Crispr_ID: NC_009767_86

• CRISPR_ID: NC_009767_86
• CRISPR_location: 4767244-4767316
• CRISPR_type: TypeV-U4
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: c2c9_V-U4

Consensus repeat of NC_009767_86

Consensus_repeat	Method
CGCAGCCGGTCGAAGCAATCCCC	CRISPRCasFinder

spacers of NC_009767_86

>86.1|4767267|27|NC_009767|CRISPRCasFinder
TCACCTCACCGAGTCATCGCGCGCCGC

CRISPR arrays and Neighbor proteins around NC_009767_86

CRISPR arrays

The CRISPR arrays of NC_009767_86

>merge|NC_009767|86|4767244-4767316|CRISPRCasFinder
CGCAGCCGGTCGAAGCAATCCCCTCACCTCACCGAGTCATCGCGCGCCGCCGCAGCCGGTCGAAGCCATCCCC

>NC_009767|86|77|4767244-4767316|CRISPRCasFinder
CGCAGCCGGTCGAAGCAATCCCC	TCACCTCACCGAGTCATCGCGCGCCGC
CGCAGCCGGTCGAAGCCATCCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122122.1|4779328_4780180_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224596
NC_009767.1|WP_012122107.1|4751000_4751957_+|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223656
NC_009767.1|WP_012122118.1|4770836_4772360_-|glycosyltransferase	unknown	unknown	gnl|CDD|366154
NC_009767.1|WP_012122112.1|4760152_4762249_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012122115.1|4765644_4766976_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213187
NC_009767.1|WP_012122110.1|4758024_4759734_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_083760340.1|4769671_4770868_-|glycosyltransferase	unknown	unknown	gnl|CDD|340825
NC_009767.1|WP_012122119.1|4773405_4774560_-|glycosyltransferase	unknown	unknown	gnl|CDD|340825
NC_009767.1|WP_012122111.1|4759734_4760175_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122109.1|4755710_4757981_-|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012122125.1|4782628_4783042_-|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|366864
NC_009767.1|WP_012122114.1|4764580_4765648_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|379312
NC_009767.1|WP_012122123.1|4780586_4781729_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	gnl|CDD|223747
NC_009767.1|WP_012122106.1|4750004_4750670_-|DUF1641-domain-containing-protein	unknown	unknown	gnl|CDD|369554
NC_009767.1|WP_083760341.1|4776809_4778969_-|hypothetical-protein	unknown	unknown	gnl|CDD|214495
NC_009767.1|WP_012122108.1|4752272_4753241_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|132997
NC_009767.1|WP_012122105.1|4748790_4749981_-|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223523
NC_009767.1|WP_012122124.1|4781792_4782374_-|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl|CDD|380337
NC_009767.1|WP_012122116.1|4767573_4769010_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009767.1|WP_012122120.1|4774556_4776773_-|glycosyltransferase	unknown	unknown	gnl|CDD|340831

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012122123.1|4780586_4781729_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	4.9e-79	261.0	7.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122122.1|4779328_4780180_-|ABC-transporter-permease	gnl|CDD|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	6.43702e-57
NC_009767.1|WP_012122107.1|4751000_4751957_+|LysR-family-transcriptional-regulator	gnl|CDD|223656	COG0583, LysR, Transcriptional regulator [Transcription].	9.472e-50
NC_009767.1|WP_012122118.1|4770836_4772360_-|glycosyltransferase	gnl|CDD|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	8.70414e-18
NC_009767.1|WP_012122105.1|4748790_4749981_-|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|223523	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].	6.55683e-37
NC_009767.1|WP_012122115.1|4765644_4766976_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213187	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system. The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenza) and a cytoplasmic membrane protein MPA2.	8.20514e-115
NC_009767.1|WP_083760340.1|4769671_4770868_-|glycosyltransferase	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	8.98128e-27
NC_009767.1|WP_012122119.1|4773405_4774560_-|glycosyltransferase	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	2.66109e-19
NC_009767.1|WP_012122109.1|4755710_4757981_-|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.00906e-54
NC_009767.1|WP_012122125.1|4782628_4783042_-|DUF86-domain-containing-protein	gnl|CDD|366864	pfam01934, DUF86, Protein of unknown function DUF86. The function of members of this family is unknown.	1.52792e-19
NC_009767.1|WP_012122114.1|4764580_4765648_-|methyltransferase-domain-containing-protein	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.09544e-16
NC_009767.1|WP_012122123.1|4780586_4781729_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.30211e-53
NC_009767.1|WP_012122106.1|4750004_4750670_-|DUF1641-domain-containing-protein	gnl|CDD|369554	pfam07849, DUF1641, Protein of unknown function (DUF1641). Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.	2.64786e-11
NC_009767.1|WP_083760341.1|4776809_4778969_-|hypothetical-protein	gnl|CDD|214495	smart00060, FN3, Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.	1.01911e-05
NC_009767.1|WP_012122108.1|4752272_4753241_-|glycosyltransferase-family-2-protein	gnl|CDD|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	1.60286e-41
NC_009767.1|WP_012122112.1|4760152_4762249_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	9.56639e-31
NC_009767.1|WP_012122124.1|4781792_4782374_-|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl|CDD|380337	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production. RmlC (deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-D-hexulose 3, 5-epimerase or dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase; also known as RfbC) is a carbohydrate epimerase involved in the production of dTDP-L-rhamnose, a precursor of the bacterial cell wall constituent, L-rhamnose. L-Rhamnose (6-deoxy-l-mannose) plays an important role in the cell-wall structure of many bacterial species. It has been found to contribute to the virulence of several species, including the Gram-negative Salmonella enterica and Vibrio cholerae, where it is present as a part of the O-antigen, and is essential for the growth of Gram-positive bacteria such as Streptococcus pyogenes. RmlC converts dTDP-6-deoxy-D-xylo-4-hexulose to dTDP-6-deoxy-L-xylo-hexulose by catalyzing the epimerization of the 5-methyl and 3-hydroxyl groups of hexulose, the third of four steps in the dTDP-L-rhamnose biosynthetic pathway. RmlC belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	6.24593e-99
NC_009767.1|WP_012122116.1|4767573_4769010_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	3.28609e-47
NC_009767.1|WP_012122120.1|4774556_4776773_-|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.04976e-34

Protein sequences

>NC_009767.1|WP_012122115.1|4765644_4766976_-|ABC-transporter-ATP-binding-protein
MAVPTADILPQEAAPLPAPTDEVVISVQNVGKMYRIYDQPQDRLKHMLFWRFGKHYGREFWALRNVSFEVRRGETVGIIGRNGSGKSTLLQIIAGTLAPTEGEVRVKGRVAALLELGSGFNPEFTGRENVYLNGAILGLSRDEIDARFDDIAAFADIGEFIDQPVKVYSSGMYARLAFAVAVSLDPDILIVDEILAVGDLAFQQRCATRLRQLRDEGLTLLYVSHSPDSIKSVCQNALLLVEGKVFYKGHAEETMNKYLNLIREETNAAMLSKEAHLPRYIPFHSLAKAKLRYGSGHVQIERVELLDEDGQFSHSFRFGDMITILVEFRSYIEVNHFSCSFLVRDSTGVDLFGTTTFDERIEFPILRVGNRGLVRFKFLNQLRIGNYGVSVALNRTSQRDYSDNILFDQIDGAAVFSVVPDISRPVHYKFFVPISIDYEVTFE
>NC_009767.1|WP_012122114.1|4764580_4765648_-|methyltransferase-domain-containing-protein
MNDSQVYVPKNYQYWRDHGSEWFDEYERRQKYMLCYHIQRVMLADYMRHSRPARVIEFGCGPGRHLKYLSRIEGIDVYGYDQSAAMVSGCLRWTTSEWIAEHVIVGEPVGPLPYPDRHFDIVYTVEALIHTRPEDVGVVLAELVRVSKWQVLHLEPAQGVQIFEDAHDGSWCHDIVAAYRQLGYECEVLPSGYIVQQPYRVILDPARPVYTWPSDMLDLLRRMESDIQPTLDQLAQNINDLSSQIVNLRAELAEAEARGRQMQQQWEATQAALKEEQRKNRQLAQNINNLSSQIVNLRAELEEAEARGQQMQQQWEATQAALEEEQRKNRILMYQQARFEEFINQLRHALKMPIE
>NC_009767.1|WP_012122112.1|4760152_4762249_-|glycosyltransferase-family-4-protein
MKRICFVTHEIAPTTWGGCGVLLYNAACMLLRKGHEVIFVLDLPHDYFDRFQGVDRLRFPNPEKCRAYHAESIVARSDLNENSFPFPSLWKAYRIHLACKYVAEREKPDLIEFHDFLGVGHYALTAKAAGLCYQATHLAVRLHNSIEVMDIHSSSAHLHAHNHFVHDLERSALQLAETILYPSPSYLREAYQPFYPLWFGRVVESQSPLVDVPSKNNYSDEDHVILFYGRIFSMKGVDVFVDAAVEMLRRYSEVRFVLAGYDSREAPDGSLTYEQFLRRKIPSRFQSAFEFVGQLDRLQVESLLPRVRFAVFPNHYESFCYAAHELYAAGIPVIVSNIPGFRDVFRHEENALVFDGTVEDLARQMMRLWNDHALRQRLIFPYPVATRPLGDIYDNPPRDSWIVRGDHASCSLLVCVIGEEGALFQETIGSLERVHKSDMRIVHLRPAGSTKDEACGWVLGQLFQFLSLEGDALLPTEVRTGQALLLLRAGDRVAPDFIRVACNTLARQPQIGFVGAWHRVRAAEKECIENFPFDASPELLPFLSGKMLHRFVVRTLPDRMLIDVFDSKAGACGEIAYVWSLDAQGQRGLIIPEPLVERGEEPHAVPRLNELSALILRDTSYWHQSRLARLLVWYVGYARAHRFPHPSLHEAPVVEPRLWRLVRRVYTMPGYAVARNAAFAFYRLWRSLDRGYGKTNAL
>NC_009767.1|WP_012122111.1|4759734_4760175_-|hypothetical-protein
MERRTPYKHIAASSVVGAAFTMTHITHVSFADLSSEVAGFPFFGLYFLVLLSALAYGLLGVVVGRLRRFSPRARIAWLVGAPLLGVMATLVIPTFPPQPWFGEEMEVTITPLNERNPAAQGSEVWLLRASNGGQALDLATFAHDGS
>NC_009767.1|WP_012122110.1|4758024_4759734_-|hypothetical-protein
MWRDNGELVALTGTTAPLRWRGQVRSALMVELLEHPWSGRVRVQVGDQAQELDLYAATARSRMVTLAPPPSLWTRAAGGLWLADIISCGVLLTAALLLLATWRPQARSRVLPWFWYTLPCVVVWSCTLLVFFPGLMSSDSLDQWDQMLRGKYNDVHPAFHTLTMWLITRVWLSPAAVALAQIGALALVCGLTVRELALLGVSRWVQVVLIVLFALSPVNNLMVITLWKDIPYAIALLCVFWMLLRVWRTDGVWLRARMAPVAIGAALAALALYRHNGAPTALLILPALLLVGRQARWRQVVVIGGVSVALVLLVKVGLYRALDVASAPPWFARQMQIHQLGAFVVHSEQLDGSDRALLERLLPRDEWHRRYWCYSLNSLLYGDPLPDQHLFDTNVGEFTALWQKLALRDPATLARHQWCLTNLIWRVTQSEEAYLSTWPRDLLIQSQWAHLLGVGPASIVPSVRDQWIVPWLERLEQPEWVWLVWRPALYLYLALFCVAVAMIRHRSWRLAGLALPVVAQSLIWMLLLTVQDFRFQYGTYVIGLLALGLVFLPVPMRGDAECDGGVVPS
>NC_009767.1|WP_012122109.1|4755710_4757981_-|glycosyltransferase
MPLPPFPLSPSLPAYGYAPVDPAATPVVSIVTPCYNSGAIFLDTARSVLRQSLQQWEWIIVNDGSDDAATLRVLALLRAVNDPRIRVVDRSRCGLSAARNAGVAVSRAPLLFFLDSDDLLAPTALEQCAWALASRPQSAAVATRCATFGAAQQETRRGFATRHMFPHDNPLTVSVLLRRSAFDRVGGFDERFRDGLEDYEFWVRLAAAGLWGHDIAEALVWLRRKAPETYRGYRWTFREDRGAMARMRNDLRTRYPQVFRDGPPRVSGEPSPILQPHALIDPEPPFANRLQPVGARRVLMLAPWVEIGGADRFTIDLAAGLRARGCRVSVCLSRPSANPWLNELRGAADEVFNLPTFLAPADYPRFLRYLIESRSITTVVVQNDLFAYRLLPFLRAWCPDVPIVDFLHIEQEHYHGGVPRAALEYDPVIDLHITSSHHLRQWMIERSADPVRVDVCYINVDTQRWQPDPAARARVRAELGAPPDVPVILFVGRLAPQKRPRLVAEIARALMEQDVPGMFLVIGDGPDMGWMRRFVQRHRLERRVRLLGSAPSAQVREIMAAADILLLPSEHEGIAFVLFEAMAMGLAPVAADVGGQRELVTPDCGVLVPLAGDQVAQYVEALQRLIADPQRRAAMGQSARARVVAHFDQQQMIDRMLELFEQAATLARDAPRPSVDRGLGLATASLAIEYFQFREALLRLAPVRWARAARWSSAWETVRRIAEVRTLLDRLDRRIYVLRREVMWRIKRALGKEYNQ
>NC_009767.1|WP_012122108.1|4752272_4753241_-|glycosyltransferase-family-2-protein
MPHLHTQSDQAAAPGTPRVSVVIPCYNQARFLPEAVASVVAQTFTDWEIIIVDDGSPDDTATVAQRLIAAHPDRRIRLIRQENRGLAEARNAGIRAARAPYILPLDADDIIEPEMLAQTVAALDARPGVGFVYTDVRRFGAENNVLRTLPYSLERLRFENLMMPATLFRREAWEQVGGFQAFSPIQGYEDREFWVSLADAGWQGWHIPQPLLRYRRAEGSMLSQARRHDLELRAKIFLRHPRLYEPDVLAWARRVLSSEWSVNGALRSPWHRLLAYLGYVALIRRHHPPLLLPTIVHPFFWRLPIRWQGRLRALARLARLQR
>NC_009767.1|WP_012122107.1|4751000_4751957_+|LysR-family-transcriptional-regulator
MLTLHKLELFVYVAQAGSISKAADHFLMSQPNVSQHIQDLEAEFGEQLLIRKHRGVELTPAGETLLQYAQEIFRLVAEARLAITDVSRLSGGNLALAATPGVGIYVLPECVEQFRMRYPQFTVSIKTGVTAEVITFLIASQCEAGFIEGELDGIRLPPHFGVLVLDTVQQYVVISHAHPWWNATSLSIQALDDQPVILRQIGSQSRAWLDKFLKSHGVRLRHVGEFDNPETIKRALLAGNAFAILPAYVVRHEVDLGVLRLLPVNDCDLQRQLKLIWNKDWPLSPITYAFLRHLATDYPSVHALLDSSAPRQPHRGRV
>NC_009767.1|WP_012122106.1|4750004_4750670_-|DUF1641-domain-containing-protein
MTTLTPTKATAPPGNGSHPTLSSDGKTETLALILAKLERMEQRLDRYDALVQQALPMAAVMTDTVDGWMHELKRSGIDIDERTKEALRLLAELTAPQSMEALRLLVAMLPTLGALVQQAPGAIATLVDTGDDLVMRLREAGVDIEHLGHRGLHAAKALIDSNVLEDSAVAVISNAAQSLADSACAARPVSAFGLLRALGDPDVQRALGFFLAFAKSFGSRC
>NC_009767.1|WP_012122105.1|4748790_4749981_-|NAD(P)/FAD-dependent-oxidoreductase
MQRHYPVVIAGGGTAGLTVAAQLVNVLDPSRIALIEPNDRHFYQPLWTLVGGGVFPKEESMRDEAEFIPAGVTWIQEYVSAFDPDQNRVALKNGDALTYDYLVVALGIQIDWDKIKGLREALAERNGVCSNYSYETVDRTWENIRSFRGGVAVFTQPSTPIKCGGAPQKIAYLADDHFRRAGVRSRSAIKFFSGTGGIFSVKKYADALTAVCRRKGIETHFQHELVEINHRQKEAVFQSLASGERVSVRYDMIHVTPPMSSPDVIKQSKLAASTGWVEVDQFSLQHVRYSNVFALGDCSNLPTSKTGAAIRKQAPVVVENLVAAMEGRPLESVYDGYTSCPLVTGYGSLILAEFDYQLMPKESFPFDQSRERYSMYALKAYGLPAMYWNGMLRGRM
>NC_009767.1|WP_012122116.1|4767573_4769010_-|glycosyltransferase-family-4-protein
MHILLITPWLTIGGADRVHLDLIRQLNRRGCRFSVVATLPAKHEWRPLFEELTPDVVTLHPTIAPAQQPAFARDLIRSRGIHAVLIGNSQFGYALLPYLRSCCRDVAFLDILHAVEPHWRDGGYPRLSLDHAAWLDLSITVSRDLRDWMIARGGDPAHIEVCYANIDVDAWNPALFDRAALRRAFGIPPRAPLILVIGRLSSEKRPRLAVRILREVARQGIAFHALIIGDGPERPVLERMLRDPLLQNVRLTGALPEERVREVMAAGDVLLLPSAREGIALVLYEAMAMGMVPVVADVGGQRELATPDCGMLIPSSKSEEAAYVAALAGLLRDPARRAAMGAQARRRIVDHFRIDQMGDRMEMLFRRAVERAMGAERPIPTEGDAARSAVEAIRLARHARDVARLWQADRYSEDASLSPVRRAVLGVVRSMRQRLRPWYRRLVGRDGHPFSRGVVAVRDRVVAWVYDEGREAPPGRRV
>NC_009767.1|WP_083760340.1|4769671_4770868_-|glycosyltransferase
MCLQWRGSRGEPMMTRLRQRLPALLRAVAALPRTVTAPRRSPPRIRFVYLHPGAATRYRVWHQVEQAQIAGLAADAVALHDSARLYDLSQVDLLIVHRLPLAALTLPLVVAARLRRIPLVFDSDDLVWDEREREYNFLDRHHDPVTIARLLRAARGMRRLMRLSDALILSTPFLAALASADVRRPSFVSPNVLSREQVALSRVAFDERQQRPLRAQPVIGYFCGHAHVHDEDIATVGAALRMALEECSEARLRCYGEVTLPPELTDVSVCDRIERRPVVDWRDLPRHIAAVDINIAPLVDNPQRRGKSAVKYLEAAAVGVPTVAVRLEPYRDAIDEGVTGVLAATRDEWVSALIRLLRDPELRRRMGEAARADVLARFTTERQAERFARMIGAIGRSA
>NC_009767.1|WP_012122118.1|4770836_4772360_-|glycosyltransferase
MTSPLVSIIIRARNEAPALRRLLPLLQSQEVDFPFDIWLLDNDSQDESATLARAYGLRYHHIPRGGFNYAAALNLGASLAEGEFIVSLSAHCFPQRSDWLAALVAPLRADRNVVAAYGRQVIDPQSGAFEAHGNAELFPADARQPKIVAFSNANSAIRRDYLLIHPFNPAIKILEDHLFYLEIAGDFDVVYVPEAVVLHEHDRFSWRYYVRRWILEGWSFYFLTRHRGLPSPYIPQRLVSLRRLLFIYPRIAVAYARRGRWAPALRAIPFFWLRDLIWLASFVRARLLHPVMAQTDTALLLRTNRFLRRQAMQQSRMTLPDAPLDWREEWQLKADWGFIRRNIADFIRLCHERGLFASPLLEVGASGQNDYLAEWYDMRTSNLASNLHSADMALDMEDMRQIADNSLGSILCSEVIEHVRHPERAIAEAFRVLRPGGTLIITTPYNIVIHNTPEDGGFHGRNFTPQGLELILREAGFDIVLLETRGATEMRRRLMPSNVFAVARKPG
>NC_009767.1|WP_012122119.1|4773405_4774560_-|glycosyltransferase
MKNLVRRALRRFGSYSEGYGAGWSLGGQPRILFVSGMDGAPLRYRVLHQAEQIALAGGSWMLVRDTESRLRECVQQCDILYLYKAGTTLQACEAVQTARRNALPVVYDTDDLNWDERLVEYCDLERYYSPPDVVRFRRIFREAEQLMQSVDCFITSTDYLAAALTAHFGIPAYVNANALSQQAIMRAEPFYRRRAAAPPRAPVTLGYFSGWPKAHESDLAVALPAVRRALDALPGARLRIVGHFERSALPVDLREWVEIAPFVPYERLFAEIARVDINLAPLVDNPHRRAKSAVKFLEAALVGVPTVASNLEPYRLIDHGRTGMLAANEEEWYAAIMALATDPLRRRAIGDAARRYVLEHETTSVRAPGFANLLRHLIDTLPLR
>NC_009767.1|WP_012122120.1|4774556_4776773_-|glycosyltransferase
MNLWLLTSQFPPAVIGGIARYVANAADMFARAGHRVTVVTVDQTEGEEVLPSGVRVLRFVPRGRAFAPYVAKDATDHNPAFPYNIMAYPIALSYELAERVSSYVQRDGVLPDMIECQEYLALPYYLIQRRLVERHPLGDVPLLLHLHSPDFCITRANRQPRYRLPGYWIGRMERFCMHAADAMLSPSFFLANQIAGEMMQLSHAIEVVPYPYLPLPALETMPERGDLVFFGRLEPRKGVMEFVGVCDHLWSRGYDFRLTLIGDDTPFGPRGMSVGAWLRWRYGRRIDEGRLIMTGASLPPEDLWRRLEKAWAVVVPSTWENYPNVCIEAMALGKLVIASTSGGQAEMIGADGDCGILFRWDQPGDCVAAVERALALSVDEVRAIGARARDRITALTSFEAVLPRRMAHFEQITTCMRPRRSFPGLMPDVPAPMRTVTPDTVPGLLSVVVPYHNLGAYLAETIASIVASSYRPLDIVIVDDGSDDPASVAALEQVGQMHPDLVRIVRCERGGLARARNRGAQAARGEFLAFVDADDLVEPSFFERAIDVLQRYDNVSFVYSWVRFFGESDACWPTWNVEFPYLLAHNMLTAFVVVRRSDFLAWGQNDPSLSDALEDYDAWISMVEQGCIGVSLPDPLVRYRMRSDSMYHSLSDAQILEMYDRIVARHRSVYERYGAELFALQNENGPGWRWNHPATDPPDVVQHQQIAALQHRVARLERLLAIPLRVRRTLRDLWRRQR
>NC_009767.1|WP_083760341.1|4776809_4778969_-|hypothetical-protein
MLMVAVSAGALSLWCEVLSMDQPLSRPGRIALALALIVNATFVLLALPSVALASGSIVYVAPSGADTPTCGSASQPCATLEAGLERIVHPATGRYAGEIRLAAGTYTYPSNRAVAFIWRRGVVTIRGGYSTSDWNTSNPTANVTILDGENVRRGIWMTNSTFDAAQCVVTIEGLTVTRGRARSDDPSGGGILNDSCTLTLRNVTITNSVARGQDNTNANPATSPGSGGGLSVRGVPDNPAVATLENVVISSNQAIGGNDSASAPRGGLASGGGLFAINARVRAVHLRVENNIARAGDAPGSAGVTGVIQFADGLGGGIFFALMPSFELDRAQVLNNRAEGGDAGNQGGLGLGGGIKIELSAGSITNSIIQGNRAEGGAGANGGAGHGGGIFSTGSTVTIENVHVLQNSVQGVNGSTVGGNGGGGGIYLITTPGAGSTVTASNIVIAGNSAQAGNGAAPTGGGLDCVDTQLTLRHATIANNELQGSVAGLGPAIRLVGTSSSAGCGGEISNSIIANHTGSPIYASSSIKPFTVARVLFFNNGSPNITVAGSAPMTEQNSLSGNPQFVSPGAPNFDYHIQAGSAARDQALNSTTAGDIDGQARPFGAASDVGADEYSTEIPLAFSRIPRGVTLSWRTPPILFITQYRIEYTKSVGANDALEGPSPIPQPVSTTTLTLSGLTRGATYTIVVVGLNGGSEVGRSQEVTLTIWQHEVFLPLVVR
>NC_009767.1|WP_012122122.1|4779328_4780180_-|ABC-transporter-permease
MAVLVSARAESVVTYLNPMILARKLWRHRDLIVQLTRREIEGRYRGAYLGILWSLAHPLLMLTVYTLVFGVIFQSRWPQARTDSLADFALILFAGLSAYSCFSETVGRAAGSIVSVPNYVKKVIFPLEVLPISILGAALFHMLISIGVLLVVHLAIGGGMPWTVILLPLVSLPLIFLSLGLAWFVASLGVYIRDVGQAVGIVLQVMFFLTPIFYSIQIIPEPFRTLVLFNPMAPVTENFRRVLLWGQLPSFPGTLWWILGTGVVMMLGHAWFMKTRKGFADVL
>NC_009767.1|WP_012122123.1|4780586_4781729_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MRKAFVYRLYPSKPQERRLEFTRETCRRFYNDCLAERKTAYEERGETIRKSAQLRRVKERKATNPDAKDVHSHILQIVVDDLDKAFQAFFRRVKTGEKPGYPRFKGRNRWKGFGLKEYGNGFKIDGRRLRITGIGRIAVRWHRPLEGRIKTLRIVKRAGKWYAAFSCITNEVPAPPAQRDVGIDVGVACLLTTSDGEKVDNPRWHRVEQRKLRVLQRRVARRKKGGGNRKKAVLALQRQHERIANRRKDFLNKLVHNLITRYDRIALEDLRITNMVRNPRLAKSILDASWGCLIRRLMSKAASAGRLVLLVDPRNTSQDCSQCGRLVAKDLSVRVHQCPHCGVVLDRDHNAAINILKRAGQVLWGISSSPGGLPQEAAGF
>NC_009767.1|WP_012122124.1|4781792_4782374_-|dTDP-4-dehydrorhamnose-3,5-epimerase
MQFTIHKTPLPGAVIIEPVCFRDERGFFLESWNSRDFAARGIAIDFVQDNHSRSVKNVLRGFHYQDMTAPMVKLVRCTLGNVLDVIVDLRVGSPTFGRWHAVELTADNMLQLLVPIGFGHAFLTLSDVAEIQYKCSIYYTPAAEGVIAWNDPDIGVPWPVTDPILSQRDRKGMRLAEYLERPAFRFGNVEGAG
>NC_009767.1|WP_012122125.1|4782628_4783042_-|DUF86-domain-containing-protein
MARDVLLRKLAYLRQLLRDLAPFEQMSRAEIEAHHYTIERLLELLVGAAADLLFHILAERGRAPTSYRDAFRLAAQEGLLPGDLAGRLQQAAGMRNVLVHLYETIDYDILYASIVPALHDFALFIALAEKWETSEEG

Crispr_ID: NC_009767_87

• CRISPR_ID: NC_009767_87
• CRISPR_location: 4806466-4806576
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_87

Consensus_repeat	Method
GGATCGGTCGAGGCGCCCCCCTGTGAGCGCCCGTTCA	CRISPRCasFinder

spacers of NC_009767_87

>87.1|4806503|37|NC_009767|CRISPRCasFinder
GGAACATGACAGGTAGAATGGCTAAATCTAAAAACTG

CRISPR arrays and Neighbor proteins around NC_009767_87

CRISPR arrays

The CRISPR arrays of NC_009767_87

>merge|NC_009767|87|4806466-4806576|CRISPRCasFinder
GGATCGGTCGAGGCGCCCCCCTGTGAGCGCCCGTTCAGGAACATGACAGGTAGAATGGCTAAATCTAAAAACTGGGATCGGTCGAGGCGCCCCCCTGTGAGCGCCCGTTCA

>NC_009767|87|78|4806466-4806576|CRISPRCasFinder
GGATCGGTCGAGGCGCCCCCCTGTGAGCGCCCGTTCA	GGAACATGACAGGTAGAATGGCTAAATCTAAAAACTG
GGATCGGTCGAGGCGCCCCCCTGTGAGCGCCCGTTCA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122139.1|4795223_4795913_+|LPS-biosynthesis-protein	unknown	unknown	gnl|CDD|226453
NC_009767.1|WP_041331117.1|4822137_4822356_+|hypothetical-protein	unknown	unknown	gnl|CDD|225718
NC_009767.1|WP_012122154.1|4817677_4818814_+|site-2-protease-family-protein	unknown	unknown	gnl|CDD|100081
NC_009767.1|WP_012122144.1|4802384_4803659_-|cystathionine-gamma-synthase-family-protein	unknown	unknown	gnl|CDD|180809
NC_009767.1|WP_012122143.1|4799129_4802234_-|response-regulator	unknown	unknown	gnl|CDD|237425
NC_009767.1|WP_012122151.1|4814027_4814678_-|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NC_009767.1|WP_041332163.1|4795936_4796611_+|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl|CDD|349772
NC_009767.1|WP_041331115.1|4818883_4819192_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122145.1|4803704_4804409_-|metallophosphoesterase-family-protein	unknown	unknown	gnl|CDD|378975
NC_009767.1|WP_012122149.1|4810381_4812460_-|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133380
NC_009767.1|WP_012122155.1|4820379_4821753_+|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|274908
NC_009767.1|WP_012122147.1|4805710_4806166_-|PH-domain-containing-protein	unknown	unknown	gnl|CDD|367615
NC_009767.1|WP_157042866.1|4797257_4798604_-|hypothetical-protein	unknown	unknown	gnl|CDD|273167
NC_009767.1|WP_012122146.1|4804691_4805714_-|phosphotransferase	unknown	unknown	gnl|CDD|270916
NC_009767.1|WP_012122141.1|4796835_4797219_+|response-regulator	unknown	unknown	gnl|CDD|333815
NC_009767.1|WP_012122153.1|4816202_4816934_+|sortase	unknown	unknown	gnl|CDD|320678
NC_009767.1|WP_012122148.1|4807954_4810078_-|hypothetical-protein	unknown	unknown	gnl|CDD|198111
NC_009767.1|WP_012122152.1|4814918_4815446_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NC_009767.1|WP_012122150.1|4813195_4814074_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|212492
NC_009767.1|WP_012122138.1|4794595_4795222_+|LPS-biosynthesis-protein	unknown	unknown	gnl|CDD|225747

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122139.1|4795223_4795913_+|LPS-biosynthesis-protein	gnl|CDD|226453	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	2.36198e-30
NC_009767.1|WP_041331117.1|4822137_4822356_+|hypothetical-protein	gnl|CDD|225718	COG3177, COG3177, Fic family protein [Function unknown].	0.00721641
NC_009767.1|WP_012122154.1|4817677_4818814_+|site-2-protease-family-protein	gnl|CDD|100081	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with additional putative N- and C-terminal transmembrane spanning regions, relative to the core protein, and no PDZ domains.	9.58057e-43
NC_009767.1|WP_012122144.1|4802384_4803659_-|cystathionine-gamma-synthase-family-protein	gnl|CDD|180809	PRK07049, PRK07049, cystathionine gamma-synthase family protein.	0
NC_009767.1|WP_012122143.1|4799129_4802234_-|response-regulator	gnl|CDD|237425	PRK13557, PRK13557, histidine kinase; Provisional.	9.31578e-92
NC_009767.1|WP_012122151.1|4814027_4814678_-|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.58369e-30
NC_009767.1|WP_041332163.1|4795936_4796611_+|CpsD/CapB-family-tyrosine-protein-kinase	gnl|CDD|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	7.63045e-73
NC_009767.1|WP_012122145.1|4803704_4804409_-|metallophosphoesterase-family-protein	gnl|CDD|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	1.79977e-16
NC_009767.1|WP_012122149.1|4810381_4812460_-|MerR-family-transcriptional-regulator	gnl|CDD|133380	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	4.25702e-15
NC_009767.1|WP_012122155.1|4820379_4821753_+|NTP-transferase-domain-containing-protein	gnl|CDD|274908	TIGR03992, Arch_glmU, UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. The MJ_1101 protein from Methanococcus jannaschii has been characterized as the GlmU enzyme catalyzing the final two steps of UDP-GlcNAc biosynthesis. Many of the genes identified by this model are in proximity to the GlmS and GlmM genes and are also presumed to be GlmU. However, some archaeal genomes contain multiple closely-related homologs from this family and it is not clear what the substrate specificity is for each of them.	7.69688e-48
NC_009767.1|WP_012122147.1|4805710_4806166_-|PH-domain-containing-protein	gnl|CDD|367615	pfam03703, bPH_2, Bacterial PH domain. Domain found in uncharacterized family of membrane proteins. 1-3 copies found in each protein, with each copy flanked by transmembrane helices. Members of this family have a PH domain like structure.	6.00844e-07
NC_009767.1|WP_157042866.1|4797257_4798604_-|hypothetical-protein	gnl|CDD|273167	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	0.000384926
NC_009767.1|WP_012122146.1|4804691_4805714_-|phosphotransferase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.56234e-30
NC_009767.1|WP_012122141.1|4796835_4797219_+|response-regulator	gnl|CDD|333815	pfam00072, Response_reg, Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.	1.88009e-27
NC_009767.1|WP_012122153.1|4816202_4816934_+|sortase	gnl|CDD|320678	cd05829, Sortase_F, Sortase domain found in the class F family of sortases. Class F sortases are mainly present in Actinobacteria, Chlorobacteria and Firmicutes. Their functions are largely unknown.	6.87811e-25
NC_009767.1|WP_012122148.1|4807954_4810078_-|hypothetical-protein	gnl|CDD|198111	smart01043, BTAD, Bacterial transcriptional activator domain. Found in the DNRI/REDD/AFSR family of regulators. This region of AFSR along with the C terminal region is capable of independently directing actinorhodin production. This family contains TPR repeats.	0.000146913
NC_009767.1|WP_012122152.1|4814918_4815446_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.03023e-13
NC_009767.1|WP_012122150.1|4813195_4814074_+|SDR-family-oxidoreductase	gnl|CDD|212492	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs. Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.99493e-106
NC_009767.1|WP_012122138.1|4794595_4795222_+|LPS-biosynthesis-protein	gnl|CDD|225747	COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane].	3.86314e-05

Protein sequences

>NC_009767.1|WP_012122147.1|4805710_4806166_-|PH-domain-containing-protein
MTTSVHPAIHERLFRPHPYIVGVKIVVCLALGVGMMLAGIVHATGAALLFALAPLFLAARIAYCELAMTLVVRGDTLLLRQGWFFWREEQIPLHRVDVLITQSLLGRLFDYGRLTITRDDDVLIVRNVGEFRQLKEEIARLQRIPAFWRVP
>NC_009767.1|WP_012122146.1|4804691_4805714_-|phosphotransferase
MKRFALTLLTLALIILLLGKSASRLAESISLCSIGLALVLVERILVAIRRRVSSGVSFVACARAVHRLRQASRTSGMRRANAPCRVFDDTTVAPARAVMRARAQHHAVPHGVSGDRVLARLRRTALHEVLLARDEYTNRCVIIKRTLPGAPTHDLRREAGMLFWLEWARLPIPAPQYLAYDERDGRSTLKMTFIDGQTIEELAGAGRLALSSLVHLLARTCVALDALHRAGYVHQDIKPANLILDQNGTLVVIDWGSARCYNLPYDPRSITCTPEFASPEQLQGLVLPGNDLYAIGKTLAALVPAPPPALARVIARATGPFAHRYATGADLAQALLAAAQ
>NC_009767.1|WP_012122145.1|4803704_4804409_-|metallophosphoesterase-family-protein
MKALIISDVHSNIIALDAIWSRECDADAVYCAGDLVDYGTHPRETLAWIRAHNVVCVQGNHDRQVAETFYEPALWHITDSALQWRHHNARRLTAADADFLMSLPEAVTFEIDGIRYGMTHLYRNYELILSRHAYHSFCRVRFPDQEIDRLILGHTHRQGVMTLGEREIWLNPGSASYRRMDDPDREAHYIVIEDGIILLRSVPYDYGAVYDDVMQQRLAADELRVVQWFFGPRD
>NC_009767.1|WP_012122144.1|4802384_4803659_-|cystathionine-gamma-synthase-family-protein
MAERKPEGYLNGRPLHPESLMMSYGYRPEWSEGAAKIPIFQTSTFIFKSAEEGKAFFELAYGLRSRRDGEQMGLIYSRLNNPDLEILEDRLTLWDEAEAAAVFASGMAAITTTLLTFLRPGDVLLHSEPVYGGTDFLFKHVLPQFGVRAVGFRAGTPPEQAELLLRRLGLTERLAMIFIETPANPTNDLVDIAACAALANRLSSVRRILVAVDNTFLGPLWQQPLNHGADLVLYSATKYIGGHSDVIAGVCLGSRELLDQVRVLRTIFGTMAGPHTGWLLLRSLETLKLRMTAQMKTARHVAAFLKTHPKVARVRYLGNLTEDDPQYEIFQRQCSAPGSMISFEVVGGEAEAFRLLNALQLIHLAVSLGGTESLAEHPATMTHADVDPEERIELGITPAMIRLSIGVEHPEDVIADLTQALEAV
>NC_009767.1|WP_012122143.1|4799129_4802234_-|response-regulator
MAWLLPVFIAFLLIAALMETAVALYAWRQRMTAGATQLVLLMAAAIVWTLAYGLTLISASLPTKLLWLGVAHLGIVFLPVLYLRFAIAYTRRAAWLWRWRGAPWYIVPIATIALNWTNTAHGLYYQDVALLQDGPFVLLHVTPGPWIWVFAVYSYALIASGALVFWRASREASSLQRGQATMVAISAFVPWIANLLQLLEWHPLMPLDITPLALSFSGLALLWGMFRYRLFTLAPIAREYVVELMSDAVIVLNARNRIIDMNPAAQRLFAPDGGSLFGQPVETLLKPWTALLRACHEPGEQVLEITWQQRIFEVKITPLIGQEGSVNGRLLIWRNITQRKHKQALLRNRLHFIQLIQQAANDCVRCEVAQIDDQIISVLEKVVRFTGVERSYLFLIAPEGDHAIRTHEWVHPAVLSSGGRRGRLNLAEFMPVIEPMRRGEIVVMQRRDVPETPEYEAVRRAFNDFGIQTVVGIPLFIGAQFIGWIGFDTVFREFEPSDAVVEAFQLTGQLIASAIHRQRIEAALRQREQHFRSLFDNMFEGVALHRLVRDDNGRMINYEIIDVNVQYERILNLRREDVVHRLATEVYGTPEPPYLAEFGAVAATGRPAHLEVYFEPMQKHFFISVSPLGPDQFATIFFDVTARKQEEAEREQLQTQLMHAQRLEAIGRLAGGVAHDFNNILTVISGSADLALTTLPSDSPAYPDIQAIQQSARRATHLVRQLLTFARRQPSHPQTIDVNALIDGMVPLILRLIGEDIRLTWMPAPHPCPIRIDPHQFEQVLMNLIVNARDAMPEGGALVIATSQTAPTGDIVVETPYIRISVQDTGVGIPVEVKAHIFEPYFTTKAPGQGAGLGLATCLGIVQQHAGFIRCESQPGQGARFDVYLPYASGESSYHQDAELDSQPERGQETILVVEDEPAVRSLAVRILRDHGYTVFEASNGREAQRVVETLPGHALHLLLTDLVMPEMSGVELATWVQARCPGVSVLFMSGYARQVTINRDNPGVAFLQKPFSRRTLLSQVRCLLDAVAVETSG
>NC_009767.1|WP_157042866.1|4797257_4798604_-|hypothetical-protein
MPFLYWRQIALIALLGILTPLFAACGGAPASQGSTPPTAVINAPTSPPVVSPANPASPSPTAVVSDPTVAPPLPPPTETPVELTFPLTLPQTAHGVVAHLYYTDRERVLTLTEIAGYTWVRQQIQWKDIEGPEPGDYKWGELDNIVNDVAARNLNLLISIVKAPSFYNPTNGLPRDPVTMGNFVEAMVKRYGTKIKAIEIWNEQNLAVENGGRVTVEDAGHYVEILVECYKRIKAVEPRIFVLAGAPSSSGVDEPSLAVSDERYYRAMYEYKGGLIKDYFDAQAVHPGGAANPPDTLWPEKPSYIEGCNPAPDRCWNDHPTHYFRHVENVRKFMVEEGVGDHQIWITEYGWATPNDTPGYEFGNYVSLEQQRDYIISAMRRIDELYRTPDGKPWVGVAFLWNMNFAVLWGAQGNPNHEQASFGILNPDWSPRPSFLAIQSYLAARKQN
>NC_009767.1|WP_012122141.1|4796835_4797219_+|response-regulator
MPDYPIRNPAIVLVEDEPDILIILHRLMRDLTGGYDIVTVSGGAEALAQIALRPVPLVITDYNMPGMNGLQLTAAIKETSPDTRVVLITAYATPELEKRAREQRVDYYLPKPFPLDRLEQIVRDVLS
>NC_009767.1|WP_041332163.1|4795936_4796611_+|CpsD/CapB-family-tyrosine-protein-kinase
MNQTNGYAESPLIALRDPRSPAAEAYRTLRTNIQFSSLDKPLHTLLATSTAPDEGKSTTLANLAVTIAQAEQRVILVDCDLRRPSLHTLFGLTNDVGLTTMILAQDDAPPPLQDTGVPGLSLLASGPLPPRPADILGSRRMETVIQRLRTMADIVLFDTPPVIAVTDAAVLATRVDGVLLVIEAGRTRRDRARRAREILEKVKANIIGVVLNGARFDGEYGYYA
>NC_009767.1|WP_012122139.1|4795223_4795913_+|LPS-biosynthesis-protein
MQLSDYLAVLRRRWWIILLTTVVAVASALIFSRLQERVYRSEASYLVVPNRIDNGLSIVLQNSMSSFREMALARPQLQKISDDLQLDRTPEWLLKRVAIQPRPDERKMIVQVDYPDPATAQRLADAIGNNMVALVSARNNFLEGTDRISMTVLEPATPPVLHRPQTRVNMLAGAVLGLVLGILLAFVLEALDDTIKTPDDVERHVQLATLGAIPATGSDTRSAALPARR
>NC_009767.1|WP_012122138.1|4794595_4795222_+|LPS-biosynthesis-protein
MPIPIYIAIIRRHWRIIAAPAIIAAVISLGLALLEPPRYRSSASLLITRSEDRRFDTEDALAYDLPAIVQGTPFSAEVSSALALTGVSIPPDQVRASLGASNRRRVVQIWAETGDPALAEALTTTSVELIQRRGLALWGDPSATPARPLVNVVVLEPPGAATQTNGWTTAIATAALRGLIGLLAGAFLAFGAHYWETGRAAPSQNTGG
>NC_009767.1|WP_012122148.1|4807954_4810078_-|hypothetical-protein
MDILLSIRVVGGIVGFWICFFLGSRTAYHPSMRWLRWSFVFAGFHFLFVALESLLTSTTSTAISLLCCATGLIAIAFWHGWLVGVRGLARTERIVRKVHLGVAVDYALVGVVISLIPADGTFIAPIIDPLVAPVLIGVYLAGALSHIWVMTWRLHHRETIPVACAASRAVLIATTIIGVSVIAVAAGAALRQSLPEVVLLIEHAGYGALSGGMALMGYGAQSYTERHMGRTRGRDYLFSGIASLGIVGVYEGVLIAFWLATSKVWPAQQALVLGIILIPVIVATHFGFDQLRDMLDWLRFGASVRRVRGTLRTITRQIGSAKPRDQVLRDVLQALAHALRAERTAIFWFKRSEAHLLAAYGQKPDSPVQADALCTVRLKPLNGFAGYEDVLPLCTGRKQHGALLIGGSDCRRWTLDERERLEAIGVLLANYIAHTASEPVTIPQHLHRLEEQTRDVQALHATLDQGRSPSVFITTLGSFQVEVRGQPASYKAVRVGRHMLNGMLMYLVANVDKTVRRDALIEIALDHRRGRKPDDVSSPDGAHYISGLRKILERWGMADALEISDTTVILKRHPSWTTDTDQVVERYCRAKQEIANDRIDRAILWLKEARALFKGDYLPDFDAADYRIEETLKWEREHAEIERLLLRCYADCPDDAIKHEALDTAHSILSRYEDDGDMLRSIERVAQRFQDHRLLQRCRALLSDCAT
>NC_009767.1|WP_012122149.1|4810381_4812460_-|MerR-family-transcriptional-regulator
MDRTAHGLTSLRNGVKTLPLAPMRDNSEIRTLIDRVLPVVDEWREHLTVSIGRATELTGLKDTQIRYFEELYRQDRDPAASSGVTRSYSLTDLRRLAVFAELLKEGYRPAQAAEIVRSFADAIDYGAAYTVADALRREGDAITDGFLLSRLASQVIFAAQREIGERLPDARIIAMFLVERRIDGVSAEEFVDIARDIATHPQNVLVAVDRAAVIGNESDSSESVWSDDESSIVLFYSRDPWSVPVPDRAQFCYYRPPSTPDATVVFMVESAGYRSIPPELTVKTSARDHLLDWMVRMCLSIFPEFRQATRAHNYRYRSDGYRLAHTRQSLTRLMHRVRDLIFGDDADVSVACLLLPDDLYKPMYLSILAHAGYPEARARQARLMLYGEGEGLSGRAFNAREPFLTLDAEQDLRVFGAQDERCKVALAAPLLSHWDTHPFGVLYLASQRPASPLWSETAFVALVFGNILSELLGRWWLTRLRRKHDNLLHRYVAEYIRWFNGMDMHGPEFNEGLQQIERIWERIAVTSASSGNVRTVVERLSRQYVTLVVLDIDRSRQLHSRGDEPFLLAAQRHVHQAIAQILPDVRGYWFKNDHTLLVLDGYAPEEAIVLIRRIAGRVQMVPVVIEGRTERTTVTISAALKSLSYQELYDLSHHDREVLRSSLMTIIDTIYEQTRGCERTIKVFQHGVWEKV
>NC_009767.1|WP_012122150.1|4813195_4814074_+|SDR-family-oxidoreductase
MAHTPVSLVTGATSGIGEVTARELARRGMHVVIVGRNRERTAATVARIKQATGVDVEPLIADLSSQAGVRSVAEAFAQRHTRLDVLVNNAGGFFASRQVSADGIEMTWALNHMSYFLLTNLLLDTLRASAPARVVNVSSDAHRNGRMRWDDLQFSRGYNGWAAYAQSKLANILFSNELARRLEGSGVTSNALHPGFVATRFAHNNGALWGGLMALMQRLWAISPEEGAQTSIYLATAPEVATVSGRYFVKSRATSPAPQAQDMDAAARLWEISERMLVNSAPVPQGGAHSPA
>NC_009767.1|WP_012122151.1|4814027_4814678_-|Crp/Fnr-family-transcriptional-regulator
MSTTPHRYPDTAWSSLLAGRAGERAERGTLIYTPDHAANDLFVVQSGMVSLHLRSGEGRVLTLRIIEAGQVFGHVGAGDDTHYDTFAEAISPVQYVRIPCGELVDLLEQTPELGIALVEDMAQHRAVVSRRLDEVAFKSVPARLASLLLDLARRHGGPHAASVPRHSHRQLAEMINAYRETVTKVINQFRDARLLEIDRSSITLVNVRRLEELAQS
>NC_009767.1|WP_012122152.1|4814918_4815446_+|GNAT-family-N-acetyltransferase
MTTTRQVTVVTTYLELPDRTAFRPWFTTDPSVTVIESRVPFPAFYRFLYRAVGETYHWTMRLDWSDEQLLAYLSRPSVTLLVLSVQGTPAGYIELNAESEEPDVEIAYFGLAPMFHGRGLGKHLLSTGVQRAFDDGARRVWVHTCTLDGPYALANYQARGFRPYKTTTETVVLPG
>NC_009767.1|WP_012122153.1|4816202_4816934_+|sortase
MLSIRWMLMILTGLFIAGCGAEQVQMPSVPDARTEALAAPLSVTSALPRATSLPTPAPTATVLPTILPTATPAPTLPPTARPSPIPTPRPAAAPPVRLVIDAIDLDRALIPVGLDADRVPIVPDHDVGWYTLGALPGQGDNIVLWGHVLRFRKAPHIPAPFARLKELRLGAPVVLIDANGKAHRYIVTRQVWAEPDEVHYMLPQGREIVTMISCIGDKVLADGTVEMTHRLITIAEPEEDVAR
>NC_009767.1|WP_012122154.1|4817677_4818814_+|site-2-protease-family-protein
MDAQVTDTLDRLELMGRVRLALDGLMTIERYAWDSRGVLTMVGSLHAPADAIYPQIRARMEALGFTPFLRASGDNVELMALPFVVSAPKPNVALPVALFLITILSTLMVGALYDGIDVFSNPAGIVAGIPFSATIIGILFVHEMGHYVVGRLRRAPVSLPYFIPVPPIPIPGLGIITFTGTLGAVIVQREPMLDRKTILEIGIAGPLAGLAVAIPLLFYGLATSPVGPPPAEGYIQEGNSILYAAAKYLVFGQFLPGNGVDVQLNAVAWGAWIGLLVTMINLLPIGQLDGGHVAYALLGEYAHYLAYAFIGGCVLLGTLVAPNWLLWGVLGLLIGPRHPPPLNDVSRIGPAHTTLAIVGLITFVLLFMPNPLQFVAGG
>NC_009767.1|WP_041331115.1|4818883_4819192_+|hypothetical-protein
MNLARQGLKPLTMGGNGWRALPRAPRWRLRSLAVGGALCLALLVFVVGGALKGGKRRSGAMMALLVARAVDHNRFVAVAEGECAVSGLPGEVDPGVFPVDDG
>NC_009767.1|WP_012122155.1|4820379_4821753_+|NTP-transferase-domain-containing-protein
MIRTAILLAAGAGVRFWPYNVVRNKCAFPIANVPAIRRLSDDLAALGVTRQVVVVGAGEASIRAALRGAAAEIVFARQARPDGTAAAALLGAASIDDDLLVVAGDIVTDRANLAALRDRFERDRPLAAALVQPLGAESSLDWLIPFVDNGVLHGVEGHSRDGDRRFCGVYAFRPEALPFLRDNPALVRVGVGGMPPVDAEIVQSLQMMVDEGERVATVDAPGFHVDLDKPWHILEANARVIDAMAAALDGDRIDPTARVHDGADIRGRLILGPGAEIGNRAVVEGDLWLGAGAKALNGAIIQGRAVVGRETVLRDYCLIGAHSSLGARGIYGHGAEFSGVALDTVYCYHYCEIWGVVGMAVDFGAATVCGNLRFDDRATVWRINGRPEIPTTAANAAYFGDFCRTGVNAIIMPGRRLGAYSICGPGVILRDDLPDRAMVMVEQQVTTRPWGPERYGW
>NC_009767.1|WP_041331117.1|4822137_4822356_+|hypothetical-protein
MLIRLVDALFDRPILTIPQAQRLLDVTYPSAQRNVEKLVQAGILQLTGEAAYGKTYVAIEIMNVIGEERTFW

Crispr_ID: NC_009767_88

• CRISPR_ID: NC_009767_88
• CRISPR_location: 4921221-4921421
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_88

Consensus_repeat	Method
CTCTCCACAAATGCGAGATAAATCTCGCACTACGCCATTGCCGGGACCC	CRISPRCasFinder

spacers of NC_009767_88

>88.1|4921270|103|NC_009767|CRISPRCasFinder
CCTCGCCTCTCTCGCCTCACCTCTCGTCTCTCCACAAATGCGAGATAAATCTCGCACTACGCCATTGCCGGGACCCTCTCGCCTCTCTCGCCTCACCTCTCGC

CRISPR arrays and Neighbor proteins around NC_009767_88

CRISPR arrays

The CRISPR arrays of NC_009767_88

>merge|NC_009767|88|4921221-4921421|CRISPRCasFinder
CTCTCCACAAATGCGAGATAAATCTCGCACTACGCCATTGCCGGGACCCCCTCGCCTCTCTCGCCTCACCTCTCGTCTCTCCACAAATGCGAGATAAATCTCGCACTACGCCATTGCCGGGACCCTCTCGCCTCTCTCGCCTCACCTCTCGCCTCTCCACAAATGCGAGATAAATCTCGCACTACGCCATTGCCGGGACCC

>NC_009767|88|79|4921221-4921421|CRISPRCasFinder
CTCTCCACAAATGCGAGATAAATCTCGCACTACGCCATTGCCGGGACCC	CCTCGCCTCTCTCGCCTCACCTCTCGTCTCTCCACAAATGCGAGATAAATCTCGCACTACGCCATTGCCGGGACCCTCTCGCCTCTCTCGCCTCACCTCTCGC
CTCTCCACAAATGCGAGATAAATCTCGCACTACGCCATTGCCGGGACCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122214.1|4919749_4920970_-|geranylgeranyl-diphosphate-reductase	unknown	unknown	gnl|CDD|273932
NC_009767.1|WP_041331144.1|4912421_4912613_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122215.1|4922396_4923311_-|chlorophyll-synthase-ChlG	unknown	unknown	gnl|CDD|236052
NC_009767.1|WP_012122212.1|4918125_4918971_+|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NC_009767.1|WP_012122216.1|4923455_4924418_-|photosynthetic-reaction-center-cytochrome-c-subunit	unknown	unknown	gnl|CDD|198423
NC_009767.1|WP_012122209.1|4914720_4915899_-|chlorophyllide-a-reductase-iron-protein-subunit-X	unknown	unknown	gnl|CDD|273929
NC_009767.1|WP_041331147.1|4928594_4929038_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122217.1|4924517_4926443_-|photosynthetic-reaction-center-subunit-M	unknown	unknown	gnl|CDD|172976
NC_009767.1|WP_012122211.1|4917349_4917832_-|2-vinyl-bacteriochlorophyllide-hydratase	unknown	unknown	gnl|CDD|369300
NC_009767.1|WP_012122222.1|4931186_4932146_-|alpha-E-domain-containing-protein	unknown	unknown	gnl|CDD|377234
NC_009767.1|WP_012122213.1|4918951_4919719_-|DUF3623-family-protein	unknown	unknown	gnl|CDD|372016
NC_009767.1|WP_157042711.1|4926684_4926813_-|light-harvesting-protein	unknown	unknown	unknown
NC_009767.1|WP_012122207.1|4910331_4911600_-|chlorophyllide-a-reductase-subunit-Y	unknown	unknown	gnl|CDD|238938
NC_009767.1|WP_012122210.1|4916365_4917337_-|zinc-binding-dehydrogenase	unknown	unknown	gnl|CDD|130269
NC_009767.1|WP_012122218.1|4926834_4927002_-|light-harvesting-protein	unknown	unknown	unknown
NC_009767.1|WP_012122221.1|4929081_4930017_-|transglutaminase-family-protein	unknown	unknown	gnl|CDD|224224
NC_009767.1|WP_012122223.1|4932138_4933569_-|circularly-permuted-type-2-ATP-grasp-protein	unknown	unknown	gnl|CDD|225190
NC_009767.1|WP_012122206.1|4908843_4910325_-|chlorophyllide-a-reductase-subunit-Z	unknown	unknown	gnl|CDD|131069
NC_009767.1|WP_012122208.1|4912702_4913434_-|DUF169-domain-containing-protein	unknown	unknown	gnl|CDD|376845
NC_009767.1|WP_012122219.1|4927505_4928507_+|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133379

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122214.1|4919749_4920970_-|geranylgeranyl-diphosphate-reductase	gnl|CDD|273932	TIGR02023, geranylgeranyl_bacteriochlorophyll_reductase, geranylgeranyl reductase. This model represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll. It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	1.40432e-168
NC_009767.1|WP_012122211.1|4917349_4917832_-|2-vinyl-bacteriochlorophyllide-hydratase	gnl|CDD|369300	pfam07284, BCHF, 2-vinyl bacteriochlorophyllide hydratase (BCHF). This family contains the bacterial enzyme 2-vinyl bacteriochlorophyllide hydratase (EC:4.2.1.-) (approximately 150 residues long). This is involved in the light-independent bacteriochlorophyll biosynthesis pathway by adding water across the 2-vinyl group.	2.77211e-71
NC_009767.1|WP_012122215.1|4922396_4923311_-|chlorophyll-synthase-ChlG	gnl|CDD|236052	PRK07566, PRK07566, chlorophyll synthase ChlG.	4.93093e-143
NC_009767.1|WP_012122212.1|4918125_4918971_+|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	1.10939e-24
NC_009767.1|WP_012122207.1|4910331_4911600_-|chlorophyllide-a-reductase-subunit-Y	gnl|CDD|238938	cd01980, Chlide_reductase_Y, Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.	1.11832e-168
NC_009767.1|WP_012122209.1|4914720_4915899_-|chlorophyllide-a-reductase-iron-protein-subunit-X	gnl|CDD|273929	TIGR02016, Chlorophyllide_reductase_35.5_kDa_chain, chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein. [Energy metabolism, Photosynthesis].	7.23746e-126
NC_009767.1|WP_012122217.1|4924517_4926443_-|photosynthetic-reaction-center-subunit-M	gnl|CDD|172976	PRK14505, PRK14505, bifunctional photosynthetic reaction center subunit L/M; Provisional.	0
NC_009767.1|WP_012122223.1|4932138_4933569_-|circularly-permuted-type-2-ATP-grasp-protein	gnl|CDD|225190	COG2308, COG2308, Uncharacterized conserved protein [Function unknown].	0
NC_009767.1|WP_012122222.1|4931186_4932146_-|alpha-E-domain-containing-protein	gnl|CDD|377234	pfam04168, Alpha-E, A predicted alpha-helical domain with a conserved ER motif. An uncharacterized alpha helical domain containing a highly conserved ER motif and typically found as a tandem duplication. Contextual analysis suggests that it functions in a distinct peptide synthesis/modification system comprising of a transglutaminase, a peptidase of the NTN-hydrolase superfamily, an active and inactive circularly permuted ATP-grasp domains and a transglutaminase fused N-terminal to a circularly permuted COOH-NH2 ligase domain.	1.62879e-109
NC_009767.1|WP_012122213.1|4918951_4919719_-|DUF3623-family-protein	gnl|CDD|372016	pfam12291, DUF3623, Protein of unknown function (DUF3623). This family of proteins is found in bacteria. Proteins in this family are typically between 261 and 345 amino acids in length.	2.37269e-43
NC_009767.1|WP_012122216.1|4923455_4924418_-|photosynthetic-reaction-center-cytochrome-c-subunit	gnl|CDD|198423	cd09224, CytoC_RC, Cytochrome C subunit of the bacterial photosynthetic reaction center. Photosynthesis in purple bacteria is dependent on light-induced electron transfer in the reaction center (RC), coupled to the uptake of protons from the cytoplasm. The RC contains a cytochrome molecule which re-reduces the oxidized electron donor. The electron transfer reactions of photosynthesis are performed by the following three components: the photosynthetic reaction center (RC), the cytochrome, and the soluble electron carrier protein. Firstly, the RC promotes the light-induced charge separation across the plasma membrane, which results in the oxidation of a pair of light-harvesting complexes, LH1 and LH2, and the reduction of quinone to quinol. The quinol then leaves the RC and moves to the cytochrome complex through the quinone pool of the plasma membrane. Secondly, the cytochrome complex reoxidizes the quinol to quinone, and the released electrons are transferred to soluble electron carriers. Third, the soluble electron carriers transport the electrons to the RC through the periplasmic space. Finally, the photo-oxidized light-harvesting complex is reduced by the soluble electron carriers, and the RC comes back to the initial state. In the course of the oxidation and reduction of the quinones, a transmembrane electrochemical gradient of protons is formed, and its energy is used to produce ATP by the ATP synthase complex.	1.4224e-93
NC_009767.1|WP_012122210.1|4916365_4917337_-|zinc-binding-dehydrogenase	gnl|CDD|130269	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	1.1763e-75
NC_009767.1|WP_012122221.1|4929081_4930017_-|transglutaminase-family-protein	gnl|CDD|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	2.90752e-50
NC_009767.1|WP_012122206.1|4908843_4910325_-|chlorophyllide-a-reductase-subunit-Z	gnl|CDD|131069	TIGR02014, chlorin_reductase_subunit, chlorophyllide reductase subunit Z. This model represents the Z subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. [Energy metabolism, Photosynthesis].	1.78056e-179
NC_009767.1|WP_012122208.1|4912702_4913434_-|DUF169-domain-containing-protein	gnl|CDD|376845	pfam02596, DUF169, Uncharacterized ArCR, COG2043.	3.60729e-35
NC_009767.1|WP_012122219.1|4927505_4928507_+|MerR-family-transcriptional-regulator	gnl|CDD|133379	cd01104, HTH_MlrA-CarA, Helix-Turn-Helix DNA binding domain of the transcription regulators MlrA and CarA. Helix-turn-helix (HTH) transcription regulator MlrA (merR-like regulator A), N-terminal domain. The MlrA protein, also known as YehV, has been shown to control cell-cell aggregation by co-regulating the expression of curli and extracellular matrix production in Escherichia coli and Salmonella typhimurium. Its close homolog, CarA from Myxococcus xanthus, is involved in activation of the carotenoid biosynthesis genes by light. These proteins belong to the MerR superfamily of transcription regulators that promote expression of several stress regulon genes by reconfiguring the spacer between the -35 and -10 promoter elements. Their conserved N-terminal domains contain predicted HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules. Many MlrA- and CarA-like proteins in this group appear to lack the long dimerization helix seen in the N-terminal domains of typical MerR-like proteins.	2.91761e-23

Protein sequences

>NC_009767.1|WP_012122214.1|4919749_4920970_-|geranylgeranyl-diphosphate-reductase
MEPVLVVGASVGGATAADTLARAGVPVVMLERDTSYVKPCGGAVPPVAFTEFDLPETLISRKVHHALVHSPSERVVEIEVAGVHRSDQDYIAMCCREEFDCYIRQRAVQHGATLIEGQLIDLAFDKEGVTVTYRERFGGARQELRAVAVIGADGAYSTTAKLLGLPNLPRCIAIQQRIRLPASKMARWEDTADLYLGPEVSPDLYAWAFPKSDHVAVGIGTGPSHSKRARELLANLKRRISRDLEGGEVILEEAHALPMEPREHMAFERAMLIGDAAGLVVHTSGEGIYWAMKSGKMAAETLIASLPDASLAALRRYERRWWKTYGTMYRFLVWLQKWGYGNARQMEVFTDMCRNLDVQRLTFESYMHKSMTPVPWLAQLRMTADIIAAQVRHYLPRRRTGQPAVA
>NC_009767.1|WP_012122213.1|4918951_4919719_-|DUF3623-family-protein
MPAYLALFVYAVLALGAAVILPALADRLSSGMFSWLFGVATVGVVAALVGLALTRNDLSLRGVYLAHLCATVVWVWMEIGCRTSAGGSARRLGFARRSPLWQEVMWVAPAAGIVALTWNGANQWGVWTFALFWWGHLSMRLTAYASAHTRDGGPLIWPPWFAAGLPPAQVLSAIFPLTVSATMAVGVWLAADALAYGLATVQGVGLALVAAQAMLVCAALWFDVLPVEVWVWRLRSFHRFADLWENGRHINSVSQ
>NC_009767.1|WP_012122212.1|4918125_4918971_+|universal-stress-protein
MRINNVPIVFPTTAIDKGFALLPNVASFASSIGRPLRIIHVLSQRYRSYAERQMASALEALPSGNGLVYELLKIEKKQRRAILDEIATTTGGILAMLPTRHNFINRLLAMMSDYEKFMIEGPLPLLALPRNGALPTSIGRILFPLDLSPRSDDSLEQAADFAKSVGAELHLLHVFGDDRLLPSEMDMKARMAARSPRELYQIDKDHIQDLAERARTHDVNVIAATAEGRAHAAILNYCNAEKIDLVIMATHGPRTSEDIWKGTTTARVIQHANIPVIAIRC
>NC_009767.1|WP_012122211.1|4917349_4917832_-|2-vinyl-bacteriochlorophyllide-hydratase
MSTYTPEQLARRDASVWTKVQAVLAPIQFLAFLISFGLVIRYLATGEGYLTATVSVWIKIALLWAITITGMIWEKEIFGRWFMAPEFFWEDAGNALAMVMHNLYFLAVWLHWSPDAIMTLMLVAYCTYLINCAQFVYRGIQTGRQRRMARSSRQTEAAVR
>NC_009767.1|WP_012122210.1|4916365_4917337_-|zinc-binding-dehydrogenase
METTRAIVITAPQHLELRNVALTDAGPEEVVVQTAFTSVSAGTERMLLAGRMPHPMLQFPVVPGYETVGRVVGRGAAVPAEYEGRWVYVGGARCFRDVNPAWGGQSAILLVDYRRVVPLDGVSPDHGVLLALAATALHGVDLIAGANHDLTGRRILVLGQGPVGQFAARIARARGAWVAVGDRIASRLERSVADLRIDVTTDSLVAAVPQPVDTIIEATGSMAALNDALPLLANDGTLLLLGYYDELRLPYMPLFLKQARLLTAKEWAAGDLQRSRDLLASGMLDAAALITHRMPVAQFEAAYATALNDPECLKLVIEWDVSG
>NC_009767.1|WP_012122209.1|4914720_4915899_-|chlorophyllide-a-reductase-iron-protein-subunit-X
MAPRMIAIYGKGGMGKSFFTSNLTARLAYDGYRVLQLGCDPKHDSCNTIFGGHSLPTLGDQWRLFREAGKEDQLSIGDVIFRNELRPGVVIFGCELGGPEVGRGCGGQGISTGFKVLENLGMSRWNLDFIVMDFLGDVVCGGFATPLARSLAEQVIILVGHDRQSLYAANNIARAAQYFRSMGGTTQILGLVVNRDDGSDTADQYAAAVGLPILTRVPLSRKVRELADACRLALEDEQFNQIFGDLAKRIARGELQPVDTYTPLSYDEFLRVFGAEEPPGRPDSARAEDLFGEKTPVFTVPILSLKPVIPQVQVTDPVQLKVQQMIEAIGMYVTDMVRSERDGITVTSGSVEIRLGEPQDLEHKVAFLSALRRSGQAFSFVDLRYADAPTYR
>NC_009767.1|WP_012122208.1|4912702_4913434_-|DUF169-domain-containing-protein
MECDLKYLNTLLVERMKVKRRPVAVTYCEDGPPPGYEPANVVACAIIREAEAGRRVYVDAHHHDCWVGQYHLGWLPDAGSLIVEGQYLTMAQGFFTEEGARRNKAQSSVLPAGSIAALAAAPLDDVPEGVSVDLLVCITDPMHAMQIAGAASVREGTFPIGELGPSACASIFATPRLKRNSVFTTGDGGGRMHNRVAAGEMFIAVPREHFRYIVELIENFRIDPEEMRRLIMPSHVRNGGDAS
>NC_009767.1|WP_041331144.1|4912421_4912613_-|hypothetical-protein
MDFLILLQAEPSPWPVWSGYALCFVPLAAVILGFIIAARFTDKQATSAYLRLDPAKANEPEQG
>NC_009767.1|WP_012122207.1|4910331_4911600_-|chlorophyllide-a-reductase-subunit-Y
MEPIALSAEQPQGHTCKLHPQSMCPAFGSLRILSRIEGSHPVMATDTGCLYGLTFVTHFYGARKSILAPTLGSAELYSGEVVEGTRMAIEAAAREPGCRLVPVVSLCVAETAGMPEELLPRKVGDAEVVLVRVPAYAIHSHPEAKDVALEALLRRLGDRESPREERTVVVLGEVFPADQLAIDAILRRMGVEATIALPGRSIDDLRRAGRAAVLAPLHPFYKGVTRLYREWGASVAGGAPVGISGAYAWLKSIGALLDLDPALVDRVAEEEREKAQAVLAAKSLKGARVLVTGYEGTELAYARLLVEAGAEVPYVSTSIGVDPLSLPDELWLKARGTQEVAYRKALEEDMAALDRYAPDFVLGTTPFAAAAKERGIPAMYFTNQLASRPFFLSGGMAATIGFVAETLERANRYREMLAFFAE
>NC_009767.1|WP_012122206.1|4908843_4910325_-|chlorophyllide-a-reductase-subunit-Z
MPPALIRDLSDTSGYWAAVWTMCAMPDVHVIADAPVGCFNLVATAVPDYTDAVPHIENMTPATITEQEVGGKGTSDKVRWTYENLRAGGVLDGKQVIVISTAESEMIGADLSSVVATLGEGTRFYWSNSLSEDEWAGRDRVLRWLWEQFGAPHGAGVQPAPGTVNIIGPTYGCFNSPSDLEEVKRLIIGAGGRINLVYPMEATLADTPRLAAAQVNVVMYREFGAGLAGMLGQPWLYAPFGMRETTAFVREIGRLLGTSEQAEAFIAGEKRTTLRAVWDLWRGPQGDWFGTTDVGIVAGRSYAEGLARYLGDELGMKIAFVSARPRRPDDPDNDEIRQMLHRRAPAFVFGSINEKIYLSEAGAKFARFFMASFPGPTVRRAVGTPFMGYRGAVYVVQEIVNGLYDTLFNFLPVDQAYSMMRGGPPKIEAAPGNLPWSLEAKAVLDDALEKLPYIPRISASRQMQMQVEALARERSLKEITPDLVREALANAGM
>NC_009767.1|WP_012122215.1|4922396_4923311_-|chlorophyll-synthase-ChlG
MPESTAPTTPSRLTTSPTVMVRRSIELMKPVTWFAPSWAFLCGAIASGASQWTWTDVGRIALGVLLAGPILCGMSQVVNDYCDRDVDAINEPQRLIPSGLVSARQVFITVAVLVVLGLSIAMFLGQYVALMTAIGMVLAVIYSAGPIRAKRNGWAGNTIVAVSYEGLPWIAGHLAFAPLTFGSVLMAALFSLGAHGIMTINDFKSMEGDRVSGIRSIPVLYGEIAAAWTAFVTINVAQILVVMYFLHVRNWVIAAIIGALVLMQIPTQWKFFSIADPRKRAIFYNASGIAMFVWGMMAAAIGVR
>NC_009767.1|WP_012122216.1|4923455_4924418_-|photosynthetic-reaction-center-cytochrome-c-subunit
MIQQPPTLFPEITNTVRGRFYIVAGIISVVMAVASIAIFWWIFYTITPAPAPPLQNPIYVNYTQEPTDYISAESLAAMNAYIQANPQPQAVQVLKGMTTAQISAYMVAQVSGGLKVDCSYCHNIANFAQQDGYPNAAKKVTARKMMLMSADLNQNYTAKLPASVGGYQITCATCHNGKAAGLEPYPIEIMNTLPNDWRLPLELDYPGGLVVTGRKDVSNHEVEQNQFAMYHMNVSMGQGCTFCHNARYFPSYEIAQKNHSIIMLQMTKHIQETYVAPGGRIADGIMAGKSPSCWLCHQGANIPPGAAKPGQVPAVLSSTP
>NC_009767.1|WP_012122217.1|4924517_4926443_-|photosynthetic-reaction-center-subunit-M
MSAVPRALPLPSGETLPAEAISSTGSQAASAEVIPFSIIEEFYKRPGKTLAARFFGVDPFDFWIGRFYVGLFGAISIIGIILGVAFYLYEGVVNEGTLNILAMRIEPPPVSQGLNVDPAQPGFFWFLTMVAATIAFVGWLLRQIDISLKLDMGMEVPIAFGAVVSSWITLQWLRPIAMGAWGHGFPLGITHHLDWVSNIGYQYYNFFYNPFHAIGITLLFASTLFLHMHGSAVLSEAKRNISDQNIHVFWRNILGYSIGEIGIHRVAFWTGAASVLFSNLCIFLSGTFVKDWNAFWGFWDKMPIWNGVGQGALVAGLSLLGVGLVLGRGRETPGPIDLHDEEYRDGLEGTIAKPPGHVGWMQRLLGEGQVGPIYVGLWGVISFITFFASAFIILVDYGRQVGWNPIIYLREFWNLAVYPPPTEYGLSWNVPWDKGGAWLAATFFLHISVLTWWARLYTRAKATGVGTQLAWGFASALSLYFVIYLFHPLALGNWSAAPGHGFRAILDWTNYVSIHWGNFYYNPFHMLSIFFLLGSTLLLAMHGATIVATSKWKSEMEFTEMMAEGPGTQRAQLFWRWVMGWNANSYNIHIWAWWFAAFTAITGAIGLFLSGTLVPDWYAWGETAKIVAPWPNPDWAQYVFR
>NC_009767.1|WP_157042711.1|4926684_4926813_-|light-harvesting-protein
MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP
>NC_009767.1|WP_012122218.1|4926834_4927002_-|light-harvesting-protein
MTDKPQNDLVPDQWKPLFNNAEWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR
>NC_009767.1|WP_012122219.1|4927505_4928507_+|MerR-family-transcriptional-regulator
MLEQVHRLLALSDVPRYNIKAVVQQTQVNVSTLRAWEQRYGVPRPTRSDHGHRLYSQRDIEIIKWLKQCTEEGLAISQAVALLRDISDTGDIAPRAPQPPPPTLADAGWPDLRTQLTEALLSANLRQAHLLVNTAVALFPIETLVLDLFQPMLIEIGDRWAQGDVCVAEERVVTNFVRQRLLGLLQIHAPFATGPRLIAGCAPEEQHEIGLIMFSLLMEQRGWELIYLGQTVSAEGLDGFLVRMAPALICMSVSMAEHVPGLLEIARIVENRRRHRLLFAYSGQVFDRHPELRGRIPGIFLGNDLREAVIRADDLGEEIDPERWARQAHFFRH
>NC_009767.1|WP_041331147.1|4928594_4929038_+|hypothetical-protein
MRSLTTWLSSRGPEVAQALDQRREAICTAVTNRLKSTFSGLLADVEARYGGQYQQMTFSRTPQRLHRLLLVALALQAPSVLQREIEWSVRLLLRHGITQHHIQSMVRWYFEAAQREVALDDQDRDHLAALEEAILATVYAIGDETSS
>NC_009767.1|WP_012122221.1|4929081_4930017_-|transglutaminase-family-protein
MLYHIRHLTRFRYSAPVSESVVEVRMQPRSDGHQRLHSFQMTTIPRTTIFSYRDILGNMVHHFDVPGRHKLLTVTSEALVEVSEPSPITALDGESWRALDALAASGEYWDLLQPGRFTHPSDLLRAFAAEIALQRGSDPLTTLCRLNTRIYDAFEYAPGSTHVHSPIDDALRMRRGVCQDFAHIMITLTRALGIPCRYVSGYLFHRAEDHDRSEADATHAWVEALLPGMGWVGFDPTNNLIAGARHIRVAIGRDYADVPPSRGVYKGQATSELDVAVRVALVATPSAAADEPPPEWQAMERAFMEEAHMQQ
>NC_009767.1|WP_012122222.1|4931186_4932146_-|alpha-E-domain-containing-protein
MTKTPMLSRVADSLFWMARYLERAEHTARLLDVHLHSALDLTPAAAERRWRRLLAALHGPLAAQSVSPYAITQAYTFDTTTSDSIMACVTAARENARQVRERISSEMWEQVNRLYLYLRTTSMDEMWSGEPHLFFRAVKEGVHLFQGITDATLSHDEGWWFIQIGRYLERAMATAALLDVHFGALDASDAASLDYFEWVSLLKSCTAFEAYCKVYTASVHPEDVAEFLLLNAEFPRSIRFAADMIQEAAQVIGRSSVPRATARVERLAGRLRAALDYGQVDEIMMDMHTYLMTIRRMCAQVHDALYQACISYSADEALR
>NC_009767.1|WP_012122223.1|4932138_4933569_-|circularly-permuted-type-2-ATP-grasp-protein
MFISYTIESAYDEMFTADGQPRPHYLPLYERLISLSAEELHRRQQAADAAFLNQGITFAVYGHEDGAEKIFPYDLIPRIITAAEWAVIERGLTQRITALNMFLRDVYHEGRILADNVVPRELVYSCRHYRREMRGVDVPRDVYVAVVGTDLVRDADGRFVVLEDNLRVPSGVSYMLVNRQVMKRTFPTLFERYNVRPTDHYGQALLETLRALDPLQRPDPTIVLLTPGVYNSAYFEHTFLARQMGVQLVEGRDLLVHDNYVYMRTTAGLQRVDVIYRRIDDDFIDPLAFRPDSALGVAGLFNAYRAGNVGLANAIGTGVADDKAIYAFVPRMIRYYLAEEPILPNVETYLAYDETDRRYILENLDNLVVKAVGESGGYGMLIGPHSTGEQREEFRRRILADPRNYIAQPTVMISRAACFVDGRVEPRHIDLRPYILYGEKIVIVPGGLTRVALRRGSLVVNSSQGGGSKDTWVLND

Crispr_ID: NC_009767_89

• CRISPR_ID: NC_009767_89
• CRISPR_location: 4933705-4933830
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_89

Consensus_repeat	Method
CGGGCGCCTGAGCCGAACCGCGCACCGCAAGCCG	CRISPRCasFinder

spacers of NC_009767_89

>89.1|4933739|58|NC_009767|CRISPRCasFinder
CGAGCGGCGGCACGACCCTTCCGCGCGCATCCGTCACCATCCGGGCGTCCCCTCCCAT

CRISPR arrays and Neighbor proteins around NC_009767_89

CRISPR arrays

The CRISPR arrays of NC_009767_89

>merge|NC_009767|89|4933705-4933830|CRISPRCasFinder
CGGGCGCCTGAGCCGAACCGCGCACCGCAAGCCGCGAGCGGCGGCACGACCCTTCCGCGCGCATCCGTCACCATCCGGGCGTCCCCTCCCATCGGGCGCCTGAGCCGAACCGCGCACCGCAAGCCG

>NC_009767|89|80|4933705-4933830|CRISPRCasFinder
CGGGCGCCTGAGCCGAACCGCGCACCGCAAGCCG	CGAGCGGCGGCACGACCCTTCCGCGCGCATCCGTCACCATCCGGGCGTCCCCTCCCAT
CGGGCGCCTGAGCCGAACCGCGCACCGCAAGCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122229.1|4939311_4939686_+|CidA/LrgA-family-protein	unknown	unknown	gnl|CDD|377131
NC_009767.1|WP_012122232.1|4942486_4943746_-|glycosyltransferase-family-1-protein	unknown	unknown	gnl|CDD|340817
NC_009767.1|WP_012122215.1|4922396_4923311_-|chlorophyll-synthase-ChlG	unknown	unknown	gnl|CDD|236052
NC_009767.1|WP_012122221.1|4929081_4930017_-|transglutaminase-family-protein	unknown	unknown	gnl|CDD|224224
NC_009767.1|WP_012122230.1|4939666_4940389_+|LrgB-family-protein	unknown	unknown	gnl|CDD|377236
NC_009767.1|WP_041331156.1|4938448_4939108_+|HAD-family-hydrolase	unknown	unknown	gnl|CDD|319859
NC_009767.1|WP_012122223.1|4932138_4933569_-|circularly-permuted-type-2-ATP-grasp-protein	unknown	unknown	gnl|CDD|225190
NC_009767.1|WP_012122224.1|4934093_4935113_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_009767.1|WP_012122225.1|4935109_4935775_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009767.1|WP_041331158.1|4941905_4942457_+|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|129813
NC_009767.1|WP_041331147.1|4928594_4929038_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122227.1|4937500_4938415_+|ribokinase	unknown	unknown	gnl|CDD|238579
NC_009767.1|WP_041332179.1|4935777_4936605_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224196
NC_009767.1|WP_012122216.1|4923455_4924418_-|photosynthetic-reaction-center-cytochrome-c-subunit	unknown	unknown	gnl|CDD|198423
NC_009767.1|WP_012122217.1|4924517_4926443_-|photosynthetic-reaction-center-subunit-M	unknown	unknown	gnl|CDD|172976
NC_009767.1|WP_012122218.1|4926834_4927002_-|light-harvesting-protein	unknown	unknown	unknown
NC_009767.1|WP_041331152.1|4936585_4936813_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042711.1|4926684_4926813_-|light-harvesting-protein	unknown	unknown	unknown
NC_009767.1|WP_012122222.1|4931186_4932146_-|alpha-E-domain-containing-protein	unknown	unknown	gnl|CDD|377234
NC_009767.1|WP_012122219.1|4927505_4928507_+|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133379

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122229.1|4939311_4939686_+|CidA/LrgA-family-protein	gnl|CDD|377131	pfam03788, LrgA, LrgA family. This family is uncharacterized. It contains the protein LrgA that has been hypothesized to export murein hydrolases.	4.82065e-28
NC_009767.1|WP_012122232.1|4942486_4943746_-|glycosyltransferase-family-1-protein	gnl|CDD|340817	cd03784, GT1_Gtf-like, UDP-glycosyltransferases and similar proteins. This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.	1.2036e-54
NC_009767.1|WP_012122215.1|4922396_4923311_-|chlorophyll-synthase-ChlG	gnl|CDD|236052	PRK07566, PRK07566, chlorophyll synthase ChlG.	4.93093e-143
NC_009767.1|WP_012122221.1|4929081_4930017_-|transglutaminase-family-protein	gnl|CDD|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	2.90752e-50
NC_009767.1|WP_012122230.1|4939666_4940389_+|LrgB-family-protein	gnl|CDD|377236	pfam04172, LrgB, LrgB-like family. The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control of murein hydrolase activity and penicillin tolerance.	1.3566e-87
NC_009767.1|WP_041331156.1|4938448_4939108_+|HAD-family-hydrolase	gnl|CDD|319859	cd16423, HAD_BPGM-like, uncharacterized subfamily of beta-phosphoglucomutase-like family, similar to uncharacterized Bacillus subtilis YhcW. This subfamily includes the uncharacterized Bacillus subtilis YhcW. It belongs to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate, and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.07898e-56
NC_009767.1|WP_012122225.1|4935109_4935775_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.82555e-63
NC_009767.1|WP_012122224.1|4934093_4935113_+|sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	4.80807e-38
NC_009767.1|WP_012122223.1|4932138_4933569_-|circularly-permuted-type-2-ATP-grasp-protein	gnl|CDD|225190	COG2308, COG2308, Uncharacterized conserved protein [Function unknown].	0
NC_009767.1|WP_041331158.1|4941905_4942457_+|TIGR00730-family-Rossman-fold-protein	gnl|CDD|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	2.61907e-56
NC_009767.1|WP_012122227.1|4937500_4938415_+|ribokinase	gnl|CDD|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	8.82963e-134
NC_009767.1|WP_041332179.1|4935777_4936605_+|ABC-transporter-permease	gnl|CDD|224196	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only].	2.39386e-09
NC_009767.1|WP_012122216.1|4923455_4924418_-|photosynthetic-reaction-center-cytochrome-c-subunit	gnl|CDD|198423	cd09224, CytoC_RC, Cytochrome C subunit of the bacterial photosynthetic reaction center. Photosynthesis in purple bacteria is dependent on light-induced electron transfer in the reaction center (RC), coupled to the uptake of protons from the cytoplasm. The RC contains a cytochrome molecule which re-reduces the oxidized electron donor. The electron transfer reactions of photosynthesis are performed by the following three components: the photosynthetic reaction center (RC), the cytochrome, and the soluble electron carrier protein. Firstly, the RC promotes the light-induced charge separation across the plasma membrane, which results in the oxidation of a pair of light-harvesting complexes, LH1 and LH2, and the reduction of quinone to quinol. The quinol then leaves the RC and moves to the cytochrome complex through the quinone pool of the plasma membrane. Secondly, the cytochrome complex reoxidizes the quinol to quinone, and the released electrons are transferred to soluble electron carriers. Third, the soluble electron carriers transport the electrons to the RC through the periplasmic space. Finally, the photo-oxidized light-harvesting complex is reduced by the soluble electron carriers, and the RC comes back to the initial state. In the course of the oxidation and reduction of the quinones, a transmembrane electrochemical gradient of protons is formed, and its energy is used to produce ATP by the ATP synthase complex.	1.4224e-93
NC_009767.1|WP_012122217.1|4924517_4926443_-|photosynthetic-reaction-center-subunit-M	gnl|CDD|172976	PRK14505, PRK14505, bifunctional photosynthetic reaction center subunit L/M; Provisional.	0
NC_009767.1|WP_012122222.1|4931186_4932146_-|alpha-E-domain-containing-protein	gnl|CDD|377234	pfam04168, Alpha-E, A predicted alpha-helical domain with a conserved ER motif. An uncharacterized alpha helical domain containing a highly conserved ER motif and typically found as a tandem duplication. Contextual analysis suggests that it functions in a distinct peptide synthesis/modification system comprising of a transglutaminase, a peptidase of the NTN-hydrolase superfamily, an active and inactive circularly permuted ATP-grasp domains and a transglutaminase fused N-terminal to a circularly permuted COOH-NH2 ligase domain.	1.62879e-109
NC_009767.1|WP_012122219.1|4927505_4928507_+|MerR-family-transcriptional-regulator	gnl|CDD|133379	cd01104, HTH_MlrA-CarA, Helix-Turn-Helix DNA binding domain of the transcription regulators MlrA and CarA. Helix-turn-helix (HTH) transcription regulator MlrA (merR-like regulator A), N-terminal domain. The MlrA protein, also known as YehV, has been shown to control cell-cell aggregation by co-regulating the expression of curli and extracellular matrix production in Escherichia coli and Salmonella typhimurium. Its close homolog, CarA from Myxococcus xanthus, is involved in activation of the carotenoid biosynthesis genes by light. These proteins belong to the MerR superfamily of transcription regulators that promote expression of several stress regulon genes by reconfiguring the spacer between the -35 and -10 promoter elements. Their conserved N-terminal domains contain predicted HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules. Many MlrA- and CarA-like proteins in this group appear to lack the long dimerization helix seen in the N-terminal domains of typical MerR-like proteins.	2.91761e-23

Protein sequences

>NC_009767.1|WP_012122223.1|4932138_4933569_-|circularly-permuted-type-2-ATP-grasp-protein
MFISYTIESAYDEMFTADGQPRPHYLPLYERLISLSAEELHRRQQAADAAFLNQGITFAVYGHEDGAEKIFPYDLIPRIITAAEWAVIERGLTQRITALNMFLRDVYHEGRILADNVVPRELVYSCRHYRREMRGVDVPRDVYVAVVGTDLVRDADGRFVVLEDNLRVPSGVSYMLVNRQVMKRTFPTLFERYNVRPTDHYGQALLETLRALDPLQRPDPTIVLLTPGVYNSAYFEHTFLARQMGVQLVEGRDLLVHDNYVYMRTTAGLQRVDVIYRRIDDDFIDPLAFRPDSALGVAGLFNAYRAGNVGLANAIGTGVADDKAIYAFVPRMIRYYLAEEPILPNVETYLAYDETDRRYILENLDNLVVKAVGESGGYGMLIGPHSTGEQREEFRRRILADPRNYIAQPTVMISRAACFVDGRVEPRHIDLRPYILYGEKIVIVPGGLTRVALRRGSLVVNSSQGGGSKDTWVLND
>NC_009767.1|WP_012122222.1|4931186_4932146_-|alpha-E-domain-containing-protein
MTKTPMLSRVADSLFWMARYLERAEHTARLLDVHLHSALDLTPAAAERRWRRLLAALHGPLAAQSVSPYAITQAYTFDTTTSDSIMACVTAARENARQVRERISSEMWEQVNRLYLYLRTTSMDEMWSGEPHLFFRAVKEGVHLFQGITDATLSHDEGWWFIQIGRYLERAMATAALLDVHFGALDASDAASLDYFEWVSLLKSCTAFEAYCKVYTASVHPEDVAEFLLLNAEFPRSIRFAADMIQEAAQVIGRSSVPRATARVERLAGRLRAALDYGQVDEIMMDMHTYLMTIRRMCAQVHDALYQACISYSADEALR
>NC_009767.1|WP_012122221.1|4929081_4930017_-|transglutaminase-family-protein
MLYHIRHLTRFRYSAPVSESVVEVRMQPRSDGHQRLHSFQMTTIPRTTIFSYRDILGNMVHHFDVPGRHKLLTVTSEALVEVSEPSPITALDGESWRALDALAASGEYWDLLQPGRFTHPSDLLRAFAAEIALQRGSDPLTTLCRLNTRIYDAFEYAPGSTHVHSPIDDALRMRRGVCQDFAHIMITLTRALGIPCRYVSGYLFHRAEDHDRSEADATHAWVEALLPGMGWVGFDPTNNLIAGARHIRVAIGRDYADVPPSRGVYKGQATSELDVAVRVALVATPSAAADEPPPEWQAMERAFMEEAHMQQ
>NC_009767.1|WP_041331147.1|4928594_4929038_+|hypothetical-protein
MRSLTTWLSSRGPEVAQALDQRREAICTAVTNRLKSTFSGLLADVEARYGGQYQQMTFSRTPQRLHRLLLVALALQAPSVLQREIEWSVRLLLRHGITQHHIQSMVRWYFEAAQREVALDDQDRDHLAALEEAILATVYAIGDETSS
>NC_009767.1|WP_012122219.1|4927505_4928507_+|MerR-family-transcriptional-regulator
MLEQVHRLLALSDVPRYNIKAVVQQTQVNVSTLRAWEQRYGVPRPTRSDHGHRLYSQRDIEIIKWLKQCTEEGLAISQAVALLRDISDTGDIAPRAPQPPPPTLADAGWPDLRTQLTEALLSANLRQAHLLVNTAVALFPIETLVLDLFQPMLIEIGDRWAQGDVCVAEERVVTNFVRQRLLGLLQIHAPFATGPRLIAGCAPEEQHEIGLIMFSLLMEQRGWELIYLGQTVSAEGLDGFLVRMAPALICMSVSMAEHVPGLLEIARIVENRRRHRLLFAYSGQVFDRHPELRGRIPGIFLGNDLREAVIRADDLGEEIDPERWARQAHFFRH
>NC_009767.1|WP_012122218.1|4926834_4927002_-|light-harvesting-protein
MTDKPQNDLVPDQWKPLFNNAEWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR
>NC_009767.1|WP_157042711.1|4926684_4926813_-|light-harvesting-protein
MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP
>NC_009767.1|WP_012122217.1|4924517_4926443_-|photosynthetic-reaction-center-subunit-M
MSAVPRALPLPSGETLPAEAISSTGSQAASAEVIPFSIIEEFYKRPGKTLAARFFGVDPFDFWIGRFYVGLFGAISIIGIILGVAFYLYEGVVNEGTLNILAMRIEPPPVSQGLNVDPAQPGFFWFLTMVAATIAFVGWLLRQIDISLKLDMGMEVPIAFGAVVSSWITLQWLRPIAMGAWGHGFPLGITHHLDWVSNIGYQYYNFFYNPFHAIGITLLFASTLFLHMHGSAVLSEAKRNISDQNIHVFWRNILGYSIGEIGIHRVAFWTGAASVLFSNLCIFLSGTFVKDWNAFWGFWDKMPIWNGVGQGALVAGLSLLGVGLVLGRGRETPGPIDLHDEEYRDGLEGTIAKPPGHVGWMQRLLGEGQVGPIYVGLWGVISFITFFASAFIILVDYGRQVGWNPIIYLREFWNLAVYPPPTEYGLSWNVPWDKGGAWLAATFFLHISVLTWWARLYTRAKATGVGTQLAWGFASALSLYFVIYLFHPLALGNWSAAPGHGFRAILDWTNYVSIHWGNFYYNPFHMLSIFFLLGSTLLLAMHGATIVATSKWKSEMEFTEMMAEGPGTQRAQLFWRWVMGWNANSYNIHIWAWWFAAFTAITGAIGLFLSGTLVPDWYAWGETAKIVAPWPNPDWAQYVFR
>NC_009767.1|WP_012122216.1|4923455_4924418_-|photosynthetic-reaction-center-cytochrome-c-subunit
MIQQPPTLFPEITNTVRGRFYIVAGIISVVMAVASIAIFWWIFYTITPAPAPPLQNPIYVNYTQEPTDYISAESLAAMNAYIQANPQPQAVQVLKGMTTAQISAYMVAQVSGGLKVDCSYCHNIANFAQQDGYPNAAKKVTARKMMLMSADLNQNYTAKLPASVGGYQITCATCHNGKAAGLEPYPIEIMNTLPNDWRLPLELDYPGGLVVTGRKDVSNHEVEQNQFAMYHMNVSMGQGCTFCHNARYFPSYEIAQKNHSIIMLQMTKHIQETYVAPGGRIADGIMAGKSPSCWLCHQGANIPPGAAKPGQVPAVLSSTP
>NC_009767.1|WP_012122215.1|4922396_4923311_-|chlorophyll-synthase-ChlG
MPESTAPTTPSRLTTSPTVMVRRSIELMKPVTWFAPSWAFLCGAIASGASQWTWTDVGRIALGVLLAGPILCGMSQVVNDYCDRDVDAINEPQRLIPSGLVSARQVFITVAVLVVLGLSIAMFLGQYVALMTAIGMVLAVIYSAGPIRAKRNGWAGNTIVAVSYEGLPWIAGHLAFAPLTFGSVLMAALFSLGAHGIMTINDFKSMEGDRVSGIRSIPVLYGEIAAAWTAFVTINVAQILVVMYFLHVRNWVIAAIIGALVLMQIPTQWKFFSIADPRKRAIFYNASGIAMFVWGMMAAAIGVR
>NC_009767.1|WP_012122224.1|4934093_4935113_+|sensor-histidine-kinase
MDTTLALADAYQRLLGELSRRLGAARAELLLRTDPRRPAQVVARCDNAGNPNGAVQTLEIPISEGAIEVGRLCMAFAPETPLPAPSELGMAQALVELAALLVEDRHQHTWGPQLQAGRRMLAVTEEELQRIILDIHDGPVQKLFAVSSHLALVQARLDEHSDTDLRRQIAPLIERINGLMESALQEIRATLSGFRLAEFEMRPLASVLQGLAIQHEALTGNQVLLNIEGELPPVELPVKIALYRVLQEALSNSYRHAGVDRHEVQVHAQEGWIELIVIDEGRGFEPPPLEGPGATERQEHIGLRGMRERVHLVGGQLQVLSRPGHGTRVIVRVPAKEAV
>NC_009767.1|WP_012122225.1|4935109_4935775_+|response-regulator-transcription-factor
MTDLNRAIRVVLADDHELVLEGLRGLLERESDMIVVATATDGESLLAIIERERPDVVVMDLAMPTRDGLSCLREIRRRGMPVKVVILTAFGDGGALQSAWEMQADGFALKTDPPRQTIATIRNVAHGQIVFPRVVRQAADATQAHGQSLLARLTQRERDVLRLLAEGMPNAQIAERLVVQESTVKYHLQNIFQKLGVTNRTEAAQVYYREGGERSILNSER
>NC_009767.1|WP_041332179.1|4935777_4936605_+|ABC-transporter-permease
MNAVLTITWLTFHEARRRRMALAAMVIGALFVALFGIGVWLIAREMERSAPLAIQNQAYSFLLIAGLYVVHFLTVMLAIFASVDTVAGEISTHTIQALVTRPIRRWQALLGKWLGFALMLTVYLGLLSLGVVAVMWLIVGYWPPNVAAGLPLLALEALTLLSLSLLGGTRLSTLTNGVALFMLYGVAFIGSWVEQIGALLQSSDAVRIGIITSLILPVEALWRRVAYLMQPPLANNLPGPFSTSSVPSEAMVVYAVVYAAIALLLAMRSFGQRDL
>NC_009767.1|WP_041331152.1|4936585_4936813_+|hypothetical-protein
MDSGICEVAVIDGGAPAPKRCWSPTKHRRTTYCNRIFERPPPALDHGLLTACTAATALINVENGVALPNDPDTDP
>NC_009767.1|WP_012122227.1|4937500_4938415_+|ribokinase
MTIVVFGSINMDLVVRTPRLPAPGETLTGHSFFTAPGGKGANQAVACARLDAPTRMVGRVGDDLFGEQLRHSLRSFGVQDDGVLTTPGPSGVALIAVDDAAENTIVIVPGANGAVGSEDMPRLERALDGARALLLQLETPLATVAAAARAGRARGATVILDPAPALPLPDELYALADILTPNESEATTLTGIPVHDEQSAAAAARALRARGARTVIIKLGARGALAADANGVRFWPAFTVTAVDTVAAGDAFNGGLAVALSEGRPFEEAIRWGLAAGALSVTKHGAQPSMPDRAELLALSGVRG
>NC_009767.1|WP_041331156.1|4938448_4939108_+|HAD-family-hydrolase
MLQALIFDFDGLILDTETPDFIVLSEQYRRFGAELLPERWVHGLGTTGGYDPYGELEALTGARLDREALRREHRERYIALCEQQPLQPGVREVIIAARARGIRLAVASSATREWVEGWLERHAIRAYFACVRTRSDGVRVKPAPDLFLSAAACLDAPPEWCVVLEDSPNGIRAAAAAGMRCVAVPVALLDTLSLPPHMLRLHSLADLPADALLDRMASR
>NC_009767.1|WP_012122229.1|4939311_4939686_+|CidA/LrgA-family-protein
MLRGMTVLLICQLIGEVTARALNLPMPGPVLGMLLLFSVLLWRGAPEWLDQVAQGLLRFLPLFFVPAGVGIMNHVQLMRAEWPAIAITLLVSTVITMIVTAGVLLLFLRLTDARKASTHATNHD
>NC_009767.1|WP_012122230.1|4939666_4940389_+|LrgB-family-protein
MQPTMTDIWVYLAQTPLLWLTATLLVYYLADLGYQRVRQWTLANPVLLSVVLLVIFLTVTGTPYQRYFDGAQFVHFLLGPTTVALALPLWRYASRLRRMLLPLSAALLVGSLTSVLSVVAIGRLTGVSEVTLRSLAPKSVTTPIAMGISEQIGGLPSLTAVLVIVTGIIGAVIAQDLFDRLRLNDQAARGLAIGVASHGIGTARALQMHAEAGAFAGLAMGLNGALTALLTPILAQILGL
>NC_009767.1|WP_041331158.1|4941905_4942457_+|TIGR00730-family-Rossman-fold-protein
MHVCVYCASSDHVPALYLEAAHTFGEGMARRGWTLVYGGGGIGLMGAVARAVHGAGGRVIGVIPQTLLEREVGYQEADELIVTGTLRERKQIMDDRADAFVALPGGFGTLEELLEIMTLRMLGYHNKPIVIVNIGGYFDPLLTQFEYIFTQNFAHERYRRLYAVKADPETALTYLERITPGSP
>NC_009767.1|WP_012122232.1|4942486_4943746_-|glycosyltransferase-family-1-protein
MRPTITILASGTLGDVRPLAALGKGLHDAGFAVALATHPQFAPLVQAQGLAFRSIGGNPSDLLLHDDAALTFDGGVGRGVVATLRYIRSAQAIYARMLDAAATACYGSALIIVSLASCWGQLIATTFGIPCVWAPLQPVTLTIRFPSPLLPVTLSLGARARRLSYTAVELATWLPWRTVFHRWRARAPGPRHMSLDPFALACTSSAPFVYGFSPHVVPPPDDWPPHHMVTGYWFLDHPAERLAPEIESFLAAGDPPIVIGFGSMGGRRPRDDAALALEALRLAQRRGILFGSADVARLAAGRRDVLVVPYAPHRLLFPRVAVAVHHGGAGTTAASLRAGIPTMTVPVGIDQPFWGMRVAAIGAGPPPLPRRRATPDRLAPAIMAATDDLIRVRAAAIGRLIGAEEGVARAVEVVARVMP

Crispr_ID: NC_009767_90

• CRISPR_ID: NC_009767_90
• CRISPR_location: 4961405-4961505
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_90

Consensus_repeat	Method
GATTGCTTCGACCGGCTGCGCTGGT	CRISPRCasFinder

spacers of NC_009767_90

>90.1|4961430|51|NC_009767|CRISPRCasFinder
CTTGCAATGACGAGATTGCTTCGACCGGCTGCGCCGGTCTCGCAATGACGG

CRISPR arrays and Neighbor proteins around NC_009767_90

CRISPR arrays

The CRISPR arrays of NC_009767_90

>merge|NC_009767|90|4961405-4961505|CRISPRCasFinder
GATTGCTTCGACCGGCTGCGCTGGTCTTGCAATGACGAGATTGCTTCGACCGGCTGCGCCGGTCTCGCAATGACGGGATGGCTTCGACCGGCTGCGCTGGT

>NC_009767|90|81|4961405-4961505|CRISPRCasFinder
GATTGCTTCGACCGGCTGCGCTGGT	CTTGCAATGACGAGATTGCTTCGACCGGCTGCGCCGGTCTCGCAATGACGG
GATGGCTTCGACCGGCTGCGCTGGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_083760347.1|4955217_4955772_+|CoA-binding-protein	unknown	unknown	gnl|CDD|224745
NC_009767.1|WP_012122255.1|4965701_4966145_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122259.1|4969204_4969474_-|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	unknown	unknown	gnl|CDD|376549
NC_009767.1|WP_041332181.1|4959602_4960169_+|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl|CDD|376665
NC_009767.1|WP_012122241.1|4951451_4951940_+|CBS-domain-containing-protein	unknown	unknown	gnl|CDD|341361
NC_009767.1|WP_012122260.1|4969543_4970647_-|hypothetical-protein	unknown	unknown	gnl|CDD|271320
NC_009767.1|WP_012122244.1|4954066_4955191_-|calcium/proton-exchanger	unknown	unknown	gnl|CDD|273043
NC_009767.1|WP_041332185.1|4964556_4965654_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122252.1|4962726_4963320_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012122253.1|4963329_4964418_-|Rieske-2Fe-2S-domain-containing-protein	unknown	unknown	gnl|CDD|176892
NC_009767.1|WP_012122256.1|4966144_4966600_-|hypothetical-protein	unknown	unknown	gnl|CDD|376293
NC_009767.1|WP_012122247.1|4956937_4957693_-|WecB/TagA/CpsF-family-glycosyltransferase	unknown	unknown	gnl|CDD|224833
NC_009767.1|WP_012122248.1|4957811_4959581_+|aspartate--tRNA-ligase	unknown	unknown	gnl|CDD|234775
NC_009767.1|WP_041331162.1|4953056_4954028_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|132382
NC_009767.1|WP_012122242.1|4952172_4953060_-|R2-like-ligand-binding-oxidase	unknown	unknown	gnl|CDD|153120
NC_009767.1|WP_012122257.1|4967037_4968096_-|hydrogenase-expression/formation-protein-HypE	unknown	unknown	gnl|CDD|100033
NC_009767.1|WP_012122258.1|4968092_4969208_-|hydrogenase-formation-protein-HypD	unknown	unknown	gnl|CDD|237892
NC_009767.1|WP_157042712.1|4960364_4961033_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122251.1|4961936_4962530_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012122246.1|4955815_4956994_+|N-acylglucosamine-2-epimerase	unknown	unknown	gnl|CDD|238153

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_083760347.1|4955217_4955772_+|CoA-binding-protein	gnl|CDD|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	9.35962e-65
NC_009767.1|WP_012122260.1|4969543_4970647_-|hypothetical-protein	gnl|CDD|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	2.67087e-32
NC_009767.1|WP_012122259.1|4969204_4969474_-|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	gnl|CDD|376549	pfam01455, HupF_HypC, HupF/HypC family.	2.50624e-30
NC_009767.1|WP_041332181.1|4959602_4960169_+|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl|CDD|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	1.45009e-87
NC_009767.1|WP_012122241.1|4951451_4951940_+|CBS-domain-containing-protein	gnl|CDD|341361	cd04584, CBS_pair_AcuB_like, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the ACT domain. The putative Acetoin Utilization Protein (Acub) from Vibrio Cholerae contains a CBS pair domain. The acetoin utilization protein plays a role in growth and sporulation on acetoin or butanediol for use as a carbon source. Acetoin is an important physiological metabolite excreted by many microorganisms. It is used as an external energy store by a number of fermentive bacteria. Acetoin is produced by the decarboxylation of alpha-acetolactate. Once superior carbon sources are exhausted, and the culture enters stationary phase, acetoin can be utilised in order to maintain the culture density. The conversion of acetoin into acetyl-CoA or 2,3-butanediol is catalysed by the acetoin dehydrogenase complex and acetoin reductase/2,3-butanediol dehydrogenase, respectively. Acetoin utilization proteins, acetylpolyamine amidohydrolases, and histone deacetylases are members of an ancient protein superfamily.This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria. Acetoin is a product of fermentative metabolism in many prokaryotic and eukaryotic microorganisms. They produce acetoin as an external carbon storage compound and then later reuse it as a carbon and energy source during their stationary phase and sporulation. In addition these CBS domains are associated with a downstream ACT (aspartate kinase/chorismate mutase/TyrA) domain, which is linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. Pairs of ACT domains bind specifically to a particular amino acid leading to regulation of the linked enzyme. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	2.04357e-47
NC_009767.1|WP_012122244.1|4954066_4955191_-|calcium/proton-exchanger	gnl|CDD|273043	TIGR00378, cax, calcium/proton exchanger (cax). [Transport and binding proteins, Cations and iron carrying compounds].	8.9253e-98
NC_009767.1|WP_012122252.1|4962726_4963320_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.16965e-39
NC_009767.1|WP_012122253.1|4963329_4964418_-|Rieske-2Fe-2S-domain-containing-protein	gnl|CDD|176892	cd08883, RHO_alpha_C_CMO-like, C-terminal catalytic domain of plant choline monooxygenase (CMO) and related aromatic ring hydroxylating dioxygenases. C-terminal catalytic domain of plant choline monooxygenase and related Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs, also known as aromatic ring hydroxylating dioxygenases). RHOs utilize non-heme Fe(II) to catalyze the addition of hydroxyl groups to the aromatic ring, an initial step in the oxidative degradation of aromatic compounds. RHOs are composed of either two or three protein components, and are comprised of an electron transport chain (ETC) and an oxygenase. The ETC transfers reducing equivalents from the electron donor to the oxygenase component, which in turn transfers electrons to the oxygen molecules. The oxygenase components are oligomers, either (alpha)n or (alpha)n(beta)n. The alpha subunits are the catalytic components and have an N-terminal domain, which binds a Rieske-like 2Fe-2S cluster, and a C-terminal domain which binds the non-heme Fe(II). The Fe(II) is co-ordinated by conserved His and Asp residues. Plant choline monooxygenase catalyzes the first step in a two-step oxidation of choline to the osmoprotectant glycine betaine. This subfamily belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket.	5.75318e-92
NC_009767.1|WP_012122256.1|4966144_4966600_-|hypothetical-protein	gnl|CDD|376293	pfam00115, COX1, Cytochrome C and Quinol oxidase polypeptide I.	5.95282e-05
NC_009767.1|WP_012122247.1|4956937_4957693_-|WecB/TagA/CpsF-family-glycosyltransferase	gnl|CDD|224833	COG1922, WecG, Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane].	5.41373e-79
NC_009767.1|WP_012122248.1|4957811_4959581_+|aspartate--tRNA-ligase	gnl|CDD|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NC_009767.1|WP_041331162.1|4953056_4954028_-|LysR-family-transcriptional-regulator	gnl|CDD|132382	TIGR03339, phn_lysR, aminoethylphosphonate catabolism associated LysR family transcriptional regulator. This group of sequences represents a number of related clades with numerous examples of members adjacent to operons for the degradation of 2-aminoethylphosphonate (AEP) in Pseudomonas, Ralstonia, Bordetella and Burkholderia species. These are transcriptional regulators of the LysR family which contain a helix-turn-helix (HTH) domain (pfam00126) and a periplasmic substrate-binding protein-like domain (pfam03466). [Regulatory functions, DNA interactions].	4.7624e-44
NC_009767.1|WP_012122242.1|4952172_4953060_-|R2-like-ligand-binding-oxidase	gnl|CDD|153120	cd07911, RNRR2_Rv0233_like, Ribonucleotide Reductase R2-like protein, Mn/Fe-binding domain. Rv0233 is a Mycobacterium tuberculosis ribonucleotide reductase R2 protein with a heterodinuclear manganese/iron-carboxylate cofactor located in its metal center. The Rv0233-like family may represent a structural/functional counterpart of the evolutionary ancestor of the RNRR2's (Ribonucleotide Reductase, R2/beta subunit) and the bacterial multicomponent monooxygenases. RNRR2s belong to a broad superfamily of ferritin-like diiron-carboxylate proteins. The RNR protein catalyzes the conversion of ribonucleotides to deoxyribonucleotides and is found in prokaryotes and archaea. The catalytically active form of RNR is a proposed alpha2-beta2 tetramer. The homodimeric alpha subunit (R1) contains the active site and redox active cysteines as well as the allosteric binding sites.	7.08992e-159
NC_009767.1|WP_012122257.1|4967037_4968096_-|hydrogenase-expression/formation-protein-HypE	gnl|CDD|100033	cd02197, HypE, HypE (Hydrogenase expression/formation protein). HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE dehydrates its own carbamoyl moiety in an ATP-dependent process to yield the enzyme thiocyanate. The N-terminal domain of HypE is related to the ATP-binding domains of the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP.	1.03189e-168
NC_009767.1|WP_012122258.1|4968092_4969208_-|hydrogenase-formation-protein-HypD	gnl|CDD|237892	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional.	0
NC_009767.1|WP_012122251.1|4961936_4962530_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.14135e-38
NC_009767.1|WP_012122246.1|4955815_4956994_+|N-acylglucosamine-2-epimerase	gnl|CDD|238153	cd00249, AGE, AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.	5.5151e-73

Protein sequences

>NC_009767.1|WP_157042712.1|4960364_4961033_+|hypothetical-protein
MRKGTVVSHPQVKNPYIRIALRRARAGTGSSPIFLNRRTAVQQLPNLRDILSGIRWTLIGAMALRAYAPERMTQDVDILIHAHDESAARSAFIAAGYRIGGTLAIGGFTALPAVAEGYSVDVLTSDAPWLDEALNHPSYDLADFPTLPRRFLVLMKLQAGRAQDIADITRLLRTADANERMLIRAVIAQYAPDLLEDYDALVTLTDLEFGAPEALPTDKSPS
>NC_009767.1|WP_041332181.1|4959602_4960169_+|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MKIYTRTGDEGETGLWGGLRVPKDAPRVQAYGTVDECNAAIGVARSAGVDTYLDALLARVQSDLFVVGADLATPGEAANIPRIGADAVQALEQAIDELEAQLEPLRQFILPGGAPSAAYLHLARTICRRAERRVVTLSRSEPVNPQITIYLNRLSDFLFVAARCANASAGVPDVPWESPRMRKEAKDE
>NC_009767.1|WP_012122248.1|4957811_4959581_+|aspartate--tRNA-ligase
MYRSHTCGELRVEHAGQEVLLAGWVHRRRDHGPLIFIDLRDRYGLTQVVFDSAAAPTAHAVATDARIEYVLQVRGRVVQRPEEAYNPDLATGMIEVHATEATILNPAKNPPLYINKEGGEDETIRLKYRYLDLRRERMQRNIILRHRIVKFIRDFLDREGFVEIETPILIKSTPEGARDYLVPSRLHPGKFYALPQSPQQLKQLLMVAGFDRYFQIARCFRDEDQRADRQPEFTQLDMEMSFVDQDDVLDIIERLFTALCREITPHKRLLTPFPRLTFAEAMERFGSDKPDLRYGLELVNLGETVATSSFGVLRAALDNGGQVKGLRVPGAGHYSRKQIDEVVDLARQAGAKGLLWAIVPEMGGEVRSSFGKQVSPDEMTAIIRRMEGAPGDLLLIVADTPKIVAQTLDRLRREFGARLNLADPNTLAWAWVLDFPLVEWNDEEQRWDAVHHPFTAPKDEDLHLMDSDPGKVRAKAYDLILNGYEAGGGSIRIHQRDVQQRLFDLLGIDRETAMRQFGHMLEAFEYGAPPHGGIAPGIDRICMILADEVTIREVMAFPKTQQAVDLMTNAPSPVDERQLRELHIALRLD
>NC_009767.1|WP_012122247.1|4956937_4957693_-|WecB/TagA/CpsF-family-glycosyltransferase
MRKRVIILGVAIDDVLMDDALAAVAGFIAEGGPHQIVTVNPEFIMEARRNRAFRRVLAAADLATPDGVGLILAARWCGTPLRGRVTGIALTERIAAAAALHGWSLFLLGAAPGVAERAAAALQRANPGLRIAGCYAGSPHPADEAAIRERILAATPDVLLVAYGHPAQDLWIARNQPIMRVPVAIGVGGTFDELAGVVPRAPALVQRLGLKWLYRLLVQPWRWRRIMTAVPIFLWTVLREGRAFNALHTEE
>NC_009767.1|WP_012122246.1|4955815_4956994_+|N-acylglucosamine-2-epimerase
MLASYAARYRAHLEESVIPFWLQHSLDHEYGGQFTCLDRDGSIYDTKKYMWLQGRAVWMFSRLYNEFDHRQEFLDAATLICRFMRRYGRDPQGRVYFSLTREGEPYFYQRKPYAAVFYMLGLLEYARATGDQECLNEAIEVFWQIDRWIRNPALLDRPALTGNPPVSSLANVMVLASMAIELARVSDDLRYVQVIRDAMDGVVRHYDPQRRILIEHVALDRRDLRAWPEGRLFSPGHSIEVAWFLLHMLEFVPSEDHRRLAFDVLEGSLEYGWDREYGGLYYFMDIEGKPTLQLESTMKLWWPHTEAIYALTLAYTLTGEERWMRWLERVDNYAFRTFVDPVEGEWFGYCDRRGDLALTSKGGNYKGFFHVPRALLFSVQRIEGASFAQHRP
>NC_009767.1|WP_083760347.1|4955217_4955772_+|CoA-binding-protein
MRTGRVIIPHVRRTAVAQSLLSTYDNGERAVESPRASTKEDAVLTTDQEIRNLLTAARTVAVVGISDDPERDSYLVAEFLQRQGYRVIPVNPRLATLNIQVLGEKAYATLRDVPEPIDIVDIFRRPETVMPVVEDAIAVGAGAVWMQLSIVNEEAAARAEEAGLKVVMNRCMAVEHRRLIPKQA
>NC_009767.1|WP_012122244.1|4954066_4955191_-|calcium/proton-exchanger
MNVLRYMLIFVPLAFLAELFFPNPLLVFALSCVALIPLAGLLGEATEELAIHVGPKIGGLLNATLGNAAELIITIVALREGKIELVKASITGSILGNLLLILGLSLLLGGIRHGIQTFDRNLTGVAATMMMLSVVGMMIPTLFELLREVQSGAVDVFNTDVRDPALDALSLGVAAILIVLYVLSLIFSFQKPERGIGAPTGVDDPSAEIEHHRAKWSVPVSLGVLTVSTIAIVFLSEFLVGAVEPVVEQLGVSELFLGVILIPLVGNVAEHIVGVQVAMKNKMDLSLSISLGSSMQIALFVAPLLVFISLLFGNEMTLYFSLFEVAALTLAVLCAVQVSVDGESNWLEGAQLLAVYLIVGLGFFYVVTPGVHGG
>NC_009767.1|WP_041331162.1|4953056_4954028_-|LysR-family-transcriptional-regulator
MLNTIHLQTFLAVVETGSYSAAAERLHLSQPAVSSHIRALEAQLDQVRLFRRVGQQMLPTQAGEELIAMAREMLELATQAEERIRSLRGQLSGRVAIGCTPSGAEVLLTGILHAFRERHPAVCLSVNVASVDIVLEQLSRQHIHIAFIEEKQSSRHWVVQLLGIDPLVLIAPRDHELAHRGLILPDALRQAPIIMPRSGSATRRVIDEGLQAGGLAPADVRVVLETDSATVALEAVCSGIGLAFVPQSCALRQTNVSTIPVELSLYQEWFALRSREHAMSRAVQEAFAFLTGDDVRAILHRVGVRSPLESKALGKAPKMERKR
>NC_009767.1|WP_012122242.1|4952172_4953060_-|R2-like-ligand-binding-oxidase
MMSHSVFVTTSRGLRRDSVPMRLFEKAKRLGVWNPSDIDFSQDMRDWQTLTDDERDLVLRLTSLFQAGEEAVTLDLLPLVATIAAEGRIEEELFLTSFLWEEAKHTDFFNRFLTEVAGVTGDLSHYHTANYRALIHEALPAAMERLRDDPSPEAQAIASLTYNMIVEGVLAETGYHAYFTMLERRNLMPGTRKGIGLLKQDESRHIAYGVYLLSRLINAEPRLWDVVVERMNELVVYAMGVIDDAFACYEVVPFGLSHDDFMQFAMGQFERRLDRIERARNQTVEAMEEEATNDA
>NC_009767.1|WP_012122241.1|4951451_4951940_+|CBS-domain-containing-protein
MTKTSASSRRRAAVPAEEEIRFWMRAPAVTVNLAAPVSEALALMREHNVRRLPVVIDTGELRGIITQGDIRGADLLRVAGMDPFEIADALRRIKVYEVMTEDPITVTPETSLREAAMLMIDNKIGGLPVVDEHNMVVGIITESDLFEALVHVLERRDMEEEG
>NC_009767.1|WP_012122251.1|4961936_4962530_+|Uma2-family-endonuclease
MTIDVLPVAGTVSHLPPPPGGRWTVADYERLPDDGQRYELIDGDLRMAPAPNTDHQAAALRIAHYLFTLVEIAGHGRVFAAPIDVELSPTTIVQPDVVVLLHGGAAAITSQRIVGPPDLVVEVVSPGTASYDRREKRDLYAAAGVREYWIADPGHRAVELLTLEGRGYRAEHVYLGQAIIPSAVVPGWTVATDLLFG
>NC_009767.1|WP_012122252.1|4962726_4963320_+|Uma2-family-endonuclease
MTIDVLPVAGTVSHLPPPPGGRWTVADYERLPDDGQRYELIDGDLRMAPAPNPDHQHVSGLIFYYLMQYVQMSGRGRVFAAPIDVELSPTTIVQPDVVVLLHGGAAAITSQRIVGPPDLVVEVVSPGTASYDRREKRDLYAAAGVREYWIADPGHRAVELLTLEGRGYRAEHVYLGQAIIPSAVVPGWTVATDLLFG
>NC_009767.1|WP_012122253.1|4963329_4964418_-|Rieske-2Fe-2S-domain-containing-protein
MQLNDYVFEPDLARATTIPARWYIDPAMLAIEEERIFGRTWQLVGRVEHVRNPGDYFTCSVVNEPLVVTRDTAGNLHAFYNVCRHRAGSVAEGCGNRKTLQCSYHAWTYNLDGTLRSTPEFEGVENFDKADYGLRPVQVDTWGPFVFVNLDPQAPPLRDMLGAIPEETANMPLERMGFYKRVDYEINCNWKVYVDNYLEGYHIPVAHPGLFKEIDYKQYRVETFRYYSKQHAPIRENPDSLYRRHLEEGAPAQALYYWVFPNLMLNIYPDNLQINIILPLGHERTLTIFEWYVLDVDRPEVAEEFHRSFKFSDVVQKEDIDICEAVQKRLRSRSYNVGRFSVLRENGVHHFHGLLAEYLQRA
>NC_009767.1|WP_041332185.1|4964556_4965654_-|hypothetical-protein
MPVVRIALAVGVVSLLIGGIWSGLMRMGWALPTLHGQLALLHGPLFVCGMLGTVIGLERAVALGRGWAFVGPGLTFIGGIAMLIGAPVSLAALLVTGGSLVLLAIFGLIAQRQPARFTVTMALGATVWLGGNLFWLAGRPLALASLWWAGFLILTILGERLELGRLRNLPSQALWWFAAGIGALLSGLILAGIAMDAGMRVAGAGFLALGAWLLQYDVARRTLRRPGLPRFSAVCILSGSGWLIIGGMIALISGALYAGPRYDALLHALFVGFVFAMIFGHAPIIIPALLNLPVRFGVWSYVPLVLLHLSLLMRIGGDLAGLGDVRRWGGMLNATAIMLFLGLTALSVWQGRQTPSRLNRVGSTE
>NC_009767.1|WP_012122255.1|4965701_4966145_-|hypothetical-protein
MPRVSVFMIRTALIHLALGAFVGGMLLADKGLHLWSWFWTLRAGHVHLMLLGWTVQFACGVAIWILPRLDAAGTRGALWLAWVCYGALNGGVLLATLSAPFAGMVGRERIAWMLPVAGVLFVAGIAAFIGHGWRRIRPFGAVPARMT
>NC_009767.1|WP_012122256.1|4966144_4966600_-|hypothetical-protein
MHRQARVYVKTAFVQLLISVLVGALLLINAGLPFHPRIGLLLPVYYHLLMVGWATQLIGGVALWMFPVLSRDRPRGDERLGWIAYGALNGGLVLRAVAEPMHAIEPHTWSAWTLAVSAILQVCAVWFLAIALWPRVRRRPEMNRSRMGGGD
>NC_009767.1|WP_012122257.1|4967037_4968096_-|hydrogenase-expression/formation-protein-HypE
MSEGLNFEGWSCPLPLRDHPNIVMGHGGGGKLSAELVEHLFLPAFADSGAVDMGDAALIAVGGAHLAFSTDSFVVRPLFFPGGNIGELAVNGTINDIAMRGAQPLVLSAGFILEEGLPLDQLAAIAHSMGVAARRAGVTLVAGDTKVVDRGHGDGVYINTSGFGIVPEGIDIGPTRAQPGDAIIVSGTIGDHGIAILSVREGLEFGATVESDTAPLNGLVADLLDETRNIHVLRDPTRGGVASALNEIARASQVGIVIDERNLPVQDAVRAACELLGMDPLYVANEGKLIAIAPASDAERLLARMRAHPLGRQAAIIGRVTADHPGLVAARTGIGGTRIVDMMVGEQLPRIC
>NC_009767.1|WP_012122258.1|4968092_4969208_-|hydrogenase-formation-protein-HypD
MKYLDEYRDPDLAQRLFAEIRRITTRPWAIMEVCGGQTHSIIRNGIDQLLPEAIELIHGPGCPVCVTPLEIIDKALAIASRPNVIFCSFGDMLRVPGSAKDLFRVKSEGGDVRVVYSPLDAVRLAQQHPDREVVFFGIGFETTAPANAMAVLQAHRLGLRNFSMLVSHVLVPPAISAIMESPTNRVQGFLAAGHVCSVMGTWQYRPLVERYHVPIVVTGFEPLDVLEGIRRVVLQLEAGRAELDNAYERAVRPEGNVAAQQVLSEVFEVTDRAWRGIGVIPQSGWRLRNAYRAYDAEARFAVGDIQTRESPICRSGEVLQGMLKPNQCPAFGKECTPRTPLGATMVSSEGACAAYYQYGRFIKAEEVGVAR
>NC_009767.1|WP_012122259.1|4969204_4969474_-|HypC/HybG/HupF-family-hydrogenase-formation-chaperone
MCLGIPGQVKEIYDMNGIRMGKVDFNGIVKDVCLAYLPDITVGDYTIVHVGFAITRLDEQSALETLALFQSIGLLDEELRSNAAEEEAA
>NC_009767.1|WP_012122260.1|4969543_4970647_-|hypothetical-protein
MVRPLVWIGARSPGALTLPPADPTPSQLYAPRGVYLDDQTLIVADSGNHRVLIWHRIPDRDGQPADVVLGQPDFYSEGPQAAGRGSRHGMHLPTGVMVIDGRLCVADSWNHRILVWNRVPETSNAPPDRVIGQADLDECEPNRGGGVTGCGFYWPYGIGWVAGRFYVADTGNRRVLSWNSIPEDRQPPDLVLGQNDECSHAENRGEGPSPCSFRWPHAIAGNGTTLYVADAGNHRVLGWTPIPARDTPACLALGQRDFQSAWEMPHTPPGPSALRFPYAVACASGRLIVADTANNRVLMWHTLPRAGVFLPADMVIGQPDFAGNGENRWQAVERDTLCWPYGISCHNHRLAIADSGNNRVIIWDISV

Crispr_ID: NC_009767_91

• CRISPR_ID: NC_009767_91
• CRISPR_location: 5018500-5018608
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_91

Consensus_repeat	Method
GCATTCTGATGATCAAAAACGGGCGATTCAATACAAG	CRISPRCasFinder

spacers of NC_009767_91

>91.1|5018537|35|NC_009767|CRISPRCasFinder
TTCTTCTATCGTTCTATACCCGTTCGTCGTTTTCA

CRISPR arrays and Neighbor proteins around NC_009767_91

CRISPR arrays

The CRISPR arrays of NC_009767_91

>merge|NC_009767|91|5018500-5018608|CRISPRCasFinder
GCATTCTGATGATCAAAAACGGGCGATTCAATACAAGTTCTTCTATCGTTCTATACCCGTTCGTCGTTTTCAGCATTCTGATGATCAAAAACGGGCGATTCAATACAAG

>NC_009767|91|82|5018500-5018608|CRISPRCasFinder
GCATTCTGATGATCAAAAACGGGCGATTCAATACAAG	TTCTTCTATCGTTCTATACCCGTTCGTCGTTTTCA
GCATTCTGATGATCAAAAACGGGCGATTCAATACAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_041331175.1|5017526_5017913_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042869.1|5019818_5020664_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224094
NC_009767.1|WP_012122302.1|5021677_5023384_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173853
NC_009767.1|WP_157042715.1|5024920_5025652_-|FCD-domain-containing-protein	unknown	unknown	gnl|CDD|224715
NC_009767.1|WP_157042714.1|5011136_5013701_-|penicillin-binding-protein	unknown	unknown	gnl|CDD|273955
NC_009767.1|WP_012122294.1|5008784_5010983_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|143635
NC_009767.1|WP_041331173.1|5006920_5008522_-|amidohydrolase	unknown	unknown	gnl|CDD|224490
NC_009767.1|WP_012122296.1|5013807_5014626_-|hypothetical-protein	unknown	unknown	gnl|CDD|290220
NC_009767.1|WP_157042870.1|5028859_5029729_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224094
NC_009767.1|WP_012122301.1|5020707_5021658_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NC_009767.1|WP_012122303.1|5023604_5024924_-|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|234607
NC_009767.1|WP_083760349.1|5025973_5027698_+|hypothetical-protein	unknown	unknown	gnl|CDD|173857
NC_009767.1|WP_012122297.1|5014806_5015658_+|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	unknown	unknown	gnl|CDD|234899
NC_009767.1|WP_012122292.1|5005502_5006897_-|ATP-synthase-subunit-I	unknown	unknown	gnl|CDD|276809
NC_009767.1|WP_012122306.1|5027898_5028822_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NC_009767.1|WP_012122299.1|5016208_5017093_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122308.1|5029784_5030951_+|galactonate-dehydratase	unknown	unknown	gnl|CDD|239441
NC_009767.1|WP_041331177.1|5018751_5018967_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122291.1|5004406_5005483_-|chorismate-synthase	unknown	unknown	gnl|CDD|235438
NC_009767.1|WP_012122298.1|5015623_5016199_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_157042869.1|5019818_5020664_-|ABC-transporter-permease-subunit	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.34159e-96
NC_009767.1|WP_157042715.1|5024920_5025652_-|FCD-domain-containing-protein	gnl|CDD|224715	COG1802, GntR, Transcriptional regulators [Transcription].	6.62931e-44
NC_009767.1|WP_157042714.1|5011136_5013701_-|penicillin-binding-protein	gnl|CDD|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NC_009767.1|WP_012122294.1|5008784_5010983_+|GAF-domain-containing-protein	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.60259e-54
NC_009767.1|WP_012122302.1|5021677_5023384_-|ABC-transporter-substrate-binding-protein	gnl|CDD|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	3.1454e-126
NC_009767.1|WP_012122296.1|5013807_5014626_-|hypothetical-protein	gnl|CDD|290220	pfam13485, Peptidase_MA_2, Peptidase MA superfamily.	0.00764699
NC_009767.1|WP_157042870.1|5028859_5029729_+|ABC-transporter-permease-subunit	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.69639e-94
NC_009767.1|WP_012122301.1|5020707_5021658_-|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.76061e-113
NC_009767.1|WP_012122303.1|5023604_5024924_-|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	3.95132e-167
NC_009767.1|WP_083760349.1|5025973_5027698_+|hypothetical-protein	gnl|CDD|173857	cd08492, PBP2_NikA_DppA_OppA_like_15, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.76432e-171
NC_009767.1|WP_012122297.1|5014806_5015658_+|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	gnl|CDD|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	8.57594e-138
NC_009767.1|WP_012122292.1|5005502_5006897_-|ATP-synthase-subunit-I	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.18587e-06
NC_009767.1|WP_012122306.1|5027898_5028822_+|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.26817e-117
NC_009767.1|WP_012122308.1|5029784_5030951_+|galactonate-dehydratase	gnl|CDD|239441	cd03325, D-galactonate_dehydratase, D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactonate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway. D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	1.46613e-152
NC_009767.1|WP_041331173.1|5006920_5008522_-|amidohydrolase	gnl|CDD|224490	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only].	3.88622e-160
NC_009767.1|WP_012122291.1|5004406_5005483_-|chorismate-synthase	gnl|CDD|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0

Protein sequences

>NC_009767.1|WP_041331175.1|5017526_5017913_-|hypothetical-protein
MLSNILTLTLLTLVVKTLRHALNDLIDAAPDWLAARLDPAWGDRSAVRVEGERLPEDATLCRLLVETAGQEAPARLNAPGECDAPAELLLRPAIQTLCTVSLQHMVCTTCADAAPQTIVPRPTPHLAV
>NC_009767.1|WP_012122299.1|5016208_5017093_-|hypothetical-protein
MSHYLNMIRQQRRRSTGLEFTARTLLAILAFVAMAGSAAYWWGVQSQLTGNRIVAVAFTAILVLAPPSLVSFLIPWSPAGMLLQKVNARTWAFPVIIGCALYLLYYAFQLQWAWWAAQPVVAETDLVYQQVLIGMIGFIIIPALLWTPVSSDELAEQVRQAHLVKRYELQTQADIAILRATLLRAQEKALIGFANLTVQEREELAAVMQSLVSGIDRTLKEIGQTVKTVSGVALPFDSMLDDNEDIRDILDYIGDTLQTSVLEDSTQEHVGAPHRSSVREREEAPRGMRERRQR
>NC_009767.1|WP_012122298.1|5015623_5016199_-|hypothetical-protein
MAVRSKPLRSSPQRPVRQPRPPAAAPRKPFAPYPIVEPPARAGIGAPAGILMLLFGLPLWALGAKYTLDGAVIGINMLATFLELPARVPAPTGWWNLLLIPVGLLFSYVESSVRLNLFGGPAQLFALLVLLILTHGIDIYTTYLGVSSLAAQSAAIGQFLNLFWWSPAIAAIVLTYLPELLIRGGWSLLTE
>NC_009767.1|WP_012122297.1|5014806_5015658_+|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase
MPELPEVQHTADSLGIQIAGARIARVERLDWTRMVETPSPDEFIRLLTGRQVRGWDRRAKWILLFLDDGWTLALHLRMSGSLTVHPAEAQPDKHTHLALRLEDGRQIFFLDPRKFGRARLLDSAGLAALDAAHGDEPLSDAFTVERLASLLRNRKRAIKPLLLDQSVIAGIGNIYADEALWRARIHPLRPAADLSAAEVAALHDGIRAALRQALANGGSTLRDYRNSYGAGGTNQEHFNAYDREGRPCPRCGATIIKTVVAQRGTHYCPACQAIPSATTNRRE
>NC_009767.1|WP_012122296.1|5013807_5014626_-|hypothetical-protein
MSQRSLSIPQIALIALVASVVLFIAGQPQSPMLSRWTQGSQTVPTIGAVAVPVADPSLLIIVASDSLYAAERAQLDEESRRACEYVAARFGGSLAAPLTVAFVQDAGCSLSGIAFTDIRKVQVHTCNSINRDRAIAILAHEYTHQLQQDRYGLRHLSADLMLSEGLATWAAGKYWLGGRPDFRSYVQMQRANGIFYPLATPYAGRGVAVMNALYYQWASFVEFLIDQYGRERLDALYVTGSSAPGSADYQAIYGKDLITLEQEWIVWLDEAR
>NC_009767.1|WP_157042714.1|5011136_5013701_-|penicillin-binding-protein
MPETPDNPVNRRMLARLLRFLWRLFLAFVRVTLVSVILAVAAAFIVYRHYSRDLPDPAQIGRHRSSETGYIYARDGTVLYELIDPLSGRRTVVPFERIPRILIEATVAVEDADFWENPGVDLRGILRALILNYQAGDIVSGGSTITQQLVRNVLLSPDERDALSLDRKLREAILAIEVSRRYSKEQILGIYLNEVYYGNRAYGVEAAAQSYFGKHVWELSPGEATLLAGLPQAPTTLNPLLNLEGAKQRQRVTLNLMVKSGYLTESQAQAIFDEPLRFASTETVIAAPHFVFYVLQLLEERYGPDTLYRSGLRVVTTLDPMWQAEAERIARQWIRAGGPGYTPLRERGATNAGVVMLTPDAQIIAMVGSIDYNDPTIDGQVNVTLAPRQPGSALKPIVYAAALQRGWTPATLIWDTPVVYPAGDGTVYAPRNYDNAFHGPQRLRMALANSLNIPAVRALEYVGIEAFVSLAHRMGITTLKDPERYGLPLALGAGEVRLLDLTAVYNTFRNGGRYRPPVAILKVTNARGETLEMPGDAPGRQALGDQGEQIAYLITDMLSDNAARRFMFGRNNVMELRDGRPAAVKTGTSNEWRDSWTVGYTPDVTVGVWVGNNDNAPMQEVAGSNGAGVIWRAIMERYHEGRPILAFEPPEGVQEVLICADTGALAGDHCPRPLKERFVAGTEPRTSDVTLLTVGVSDDGRCLAASYTPPERVRQVTFVVYPLAFRAWAESNGIAQPPQQYCPPPEAGVGREGGSIAQITQPAANTMVRDPLVYVRGVALGIYALEIAPGWTPVAEWRTIARGEAIRDGILGVWQTGDYAAGEYMLRLRVTTAEGILIEQRVPVRLEPVESRTP
>NC_009767.1|WP_012122294.1|5008784_5010983_+|GAF-domain-containing-protein
MSDAEALQSENEALKARIRELERRLTEARTAPNRRATEDDATAFHQTALAIMNRLDLNNVLEAIVAHAAHLANTTHGYLYLRRPDADVMDMRFCTGRIALNRGSVIEPGEGISGRVWQSGEPMMVENYRMWEGRLDRLEETDFGAMIAVPLKSNGAVIGVLGVAYDTPDGVDFHSIAALLMRFADLAAIAIDNAQLYTKAQTELAERVRREAELRDTTQHLHDLYTVAHRQAQELRLLGEVRATLAREISLPSIFRTVVESLASTFGYTQVCIYLRAHDELVLQHQVGYHFIYERIPVGVGIISRTILSERPTLVADVSADPDFLGAIDGVVSEVCVPLRDRGKVIGALNIESRHGVVLTDDDLRLMTELAEHINVAIDRAGLYEQLWRHLQQLDALYSIMGDITGNLHLDNVLTTIVERMIALVRAKHGALALYDAQHNDLLVHLSINMDYDYTGVRLALGEGAMGKAALKRHPVVVYDYRSWRERSLQCEAESTANVLAVPLLAGAELIGAMSAGDSDLKRIFTEDDVRLLSMFAQQATIAIKNARLFAEVQHLAITDPLMGIYNRRYFFVAARREFERARRHRHPLAVILADLDDFKQINDVYGHPIGDRVLQMVSTVFRRELRSGDLLARYGGEEIIALLPETDHEGAVRGVERLRLILAQAVVATNQGDVSVTASFGVAIFAEPFDVPNVEQLITQADQALLRAKQAGKNRVEVWHEKDHVGQSRSV
>NC_009767.1|WP_041331173.1|5006920_5008522_-|amidohydrolase
MSDPIILYNGPIYTLDPAHPRAQAVAIRNGRVIAVGSEGKVRAAVTGRAEGINLNGRALIPALTDAHVHLIAHALARRNVRLDDAATLDDALQQIGVAAERLPAGAWVQGRGWDHSRWGRWPTAADLDAVIGDRPAYFSRKDGHSAWVSSAALRLAGITAETPDPVGGAIQRERGEPTGILLETAIDLVRRHIPEPGQEERLAAVREAIEEAHSYGMVGMHLPTSMTPGDGRMTLDDLQTLRERGHLQLRCLVYLGLDGLDAALALGLHSGLGDRWIRLGGIKMFADGSLGSQTADMLAPYEGSSNRGIAVLSSGELRHAVRRAIHGGLAVMVHAIGDAANRKVLDAIEAALPGAPPLSIPNRIEHCQVVHPDDLPRFARLGVIASMQPIHCTADMEVADVLWGKRCAYAYAWRSFLDAGATLAFGSDAPVESLNPWLSVHAAVTRQRPEGTPDGGWYSEQRLTVEEALRGFCYGCAVAAGAAAEQGVIAPGMLADFAILSADPFKLDPSALHTIRAEMTILEGKVVWEQERL
>NC_009767.1|WP_012122292.1|5005502_5006897_-|ATP-synthase-subunit-I
MNADTLHQAIAAARDGRRDDARVLLMRTLEVDPRNERAWLWLSGVVDDPNDVKICLENVLALNPSNVRARQGLEWLHARIGLPLPPSPLLERGGNTEREIDAGAFALTRLRAYRATLADVAVMPAPARQNVQAAPAPARQSVSSVPAPGRAAVQSGARAPNRAAATSAARLASIETDDNTIPCPYCGAPTVEAQRRCTQCNESLLVRVAPSEERSPMVSALVWLWRGGAMATVLIALVFPALGLLLYQENPARGFLIGILIPAALLILMALIGLSAAQQLAQRSVWGLYLATGLTVAGLIGALALVGRPDIMPVMLERLIGATTLPPEWTTRLLSGARIVAISAIVAHIAALALTIAGYHHIVGRLERFRHIVKPSDHVTHYNNGVALKNRGMWYAAALEWEWAVKKAPYDVTCLRALGLAYARLKQFDKARTMLDRAMQTAPHQPGLADDRALVERLASQKER
>NC_009767.1|WP_012122291.1|5004406_5005483_-|chorismate-synthase
MPGNTFGQVFRLTTWGESHGPAVGCVVDGCPAGLDISEDYIQHELNRRRVGQSRVTSARQESDQVQILSGVFEGRATGAPISMLVFNTDAKPGHYENIKDLYRPGHADYTWDVKYGFRDWRGGGRSSARETIGRVAGGAVAKRLLAQHGVSIIAWTAQLGDLKAEVIDESEIERNIMRCPDARVAALMVERVEQARRSLDSLGGIVEVRARGVPPGLGEPVFDKLQADIGKAMFSIPAIKGVEFGEGFGVAHMTGSVHNDPFERRADGTIGTSSNHHGGILGGISTGEEIVLRIAAKPPASIARLQRTVDREGNPTEIEIHGRHDPTVLPRLVPIAEAMLALVLADHLLRQRLARMER
>NC_009767.1|WP_041331177.1|5018751_5018967_-|hypothetical-protein
MNPHSAPAVSAVAPIGHPASSGVPPVPDEHILVSRQHLEQLQRHIRLGYERFPTRHLRQSLLILEHMLARR
>NC_009767.1|WP_157042869.1|5019818_5020664_-|ABC-transporter-permease-subunit
MRRRAPPLIAALRRNTPGLVGLIIITLVVLAALLAPVISPYSPTAQVSRRLLEPGAQYLLGTDEFGRDIFSRVIYGSRISLYVGAVSVSLALVFGGALGLIAGYAGGRIDTLLMRLIDMLFAIPSLVLAIVIAGLLGPSLTNAMIAIGIVYAPIYARLVRGEMLAVRNYAYIEAAHAVGVRHIGLITRYFLPNIAAPLIVQTSLLLSTAILAEAALSFLGLGAQPPDPSWGAMLGSGRRFMELTPWVAIAPGIAIVITVLGFNLLGDGLRDVLDPRLRGST
>NC_009767.1|WP_012122301.1|5020707_5021658_-|ABC-transporter-permease
MNRYLLQRLALVIPTLAGVSLIIFALMRLLPGDVVDILFGGDTQADQRTLDQIRENLGLNRPLAVQYLEWIGGFLSGNFGVSMRTGIPVAESIAQGMPVTLQLAVMAIFFACLFAIPLGIIAAVRRNGVTDMLTRIVGLIGLSFPAFWLATMFLLISSTMFRWTPPLGWVSPFADFGRNMQMMLAPALLLALQPMAIIMRMTRASLLEVLRQDYIRTAYAKGLRDRAVLLRHALQNAFIPVLTVIGVQFGVLMGGSIIIEQIFSLPGIAFLLINGIYNRDYPVVQSTVLLLSLIFVLVNLAVDLLYSAVDPRIRYD
>NC_009767.1|WP_012122302.1|5021677_5023384_-|ABC-transporter-substrate-binding-protein
MNDRCSDQGEQKVRRIDRRAFLRLVAAGGGALALQACGGGAPPAAAPTTAPAAPTVAPAAPTAAPAAPTAAPAAPTAAPVASNARGGKVTWAMLGDPVSLEPYGINITGQYNYEAREPMYDSLLVWDRDLKVQPSLAESFETPDDTTYIFNLRSGVKFHNGRELTAEDVKFSLDTIINPPDGRNPGAAFFANFDTIEVVDPLTIRINLKKIDPTIPGLFAWSRYTNIFPTDMPSQINPVTQAIGTGPFRLVSYTPNAEIVYERFSDHWNPEQPNIDQLIYRVIPEEDARIAALRSGDIDGTDVTPLGARRLQNDSDITILKGLYSQPKVLQFTLKGGKPWDIKEVRQAISLTIDRQELIDKVMEGEAELTGPVVPGYGDWPLSQDELRAAYQVDVEKARQLMAQAGYADGFKVTAMTFANYSNDNAIIVQEQLRQLNIDMQIEQIEFGTFAQRVTNGEFEWCFTARGMRADVSGYLNDFRRLGIAEKNWFPAWENAELNEAYDAAMATFDQAKRRELMQKVQRIVINEAPHIYLYQDYRFSAVRKRVQNYYVAFTTFRPALREIFVTA
>NC_009767.1|WP_012122303.1|5023604_5024924_-|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme
MTATMTNATLVERARQVIPGGVNSGNRVLPWPIAFVRAEGAYLFDADDRQYLDYHAAFGPIILGHNHPQVNAAVAEAMSRIDIIGAGVTDLEVELADRLNRHIPCAERVLLTNSGSEATYAALRLARAVTGRNKIIKFQGTYHGWHDAVLMNVISPPEKIGQHDPLSLGMLPDVIRHTIVLPFNDTEAVADTLHRQGEEIAAVLVEVIPHNIGCVLPRPEFLQALRDLTRQHGVMLIFDEVITGFRHALGGYQSIVGVTPDLATFAKAMANGFPIAALAGRAELMDRFAPGGGVFFAGTYNGHSIGVAAALATIAELESGEVHAHCFALAQIAADGLMQIAAELGIPLTVARFGSVFVPYFMEPAPIENYTDLFRNNTARDLWFRKTMCEHGIFMIPTALKRNHVSAAHTRADIDRTLEIARQVLRAMPADLERSARYP
>NC_009767.1|WP_157042715.1|5024920_5025652_-|FCD-domain-containing-protein
MLTPIDHRLFEKAMTFREAAYQAIKQAILDGSLEPGQPLVEERLAEMLQISRTPVREALAILEHEGLIAPVYRRGLFVCKLTRDQVVELFTANEAVEPFLARRAAHYADPEQIAALDALIREGEACAERHDIAGFLRAGRLFHAGVGRAAGNLILAQFVERNEERVDLFLMGYRKAVDVEMMRTSNREHRAIYRAIVARDPDAAARLAIYHLQSVRERFAALVGDDDSDMMTSLSEQTKEQVE
>NC_009767.1|WP_083760349.1|5025973_5027698_+|hypothetical-protein
MQTPIGQEAAMALRDLFVRPSSILMVLLIAGSLILAACGATPQQSAPVPTQAGAAPPPTSVPATPADARPQATGRTRLVFFGNLEPASIDVITMSGNVNERQVAAQIFETLVYMDQSQQIYPGLAREWSRSDDATTWTFKLVSGVKWHDGTPFTAQSVADYFDYIRDNPVGSGPGSLKAVIGSAKAVDETTVELTLTAPRPDLLIELADPGMGIGNAAYLKRVGADAGFNPVGTGPFKFKEWVRGSQIVLERNPEWTWGSPLFKMSGPPLIEEVVFRFSSEAQTRLAALEAGEVDFVDLLPFQDVVRVRTDPRFTVTGVLLPGMPQMNYLNTSLAPTDDINVRKAIIYATDKQGIIESVYFNMVEPAYGPLSRVFPEYEPALEQMYEYNPEKAAQLLEEAGWLPGPDGVRVKDGRRLEVTIVENKGWNDWVYVLQANLQAIGFDAKVLTTQGPSNTEAIASGKYHVPAMGDVFASASQMTRDWHSEGYGTFPSGHFLKGEDGARLDRMLKEAETEIDPEKRIEKYREIQKFIMEQALMVPIFELYFYVAHANNLKGFVVDGTGFYKYFAPAYFE
>NC_009767.1|WP_012122306.1|5027898_5028822_+|ABC-transporter-permease
MSAYLIQRVLLTIPILLGIVILTFFLVHLIPGDAVSAMQGQLKMSAQQMEQMREALGLNDPLHVQLGRYLMRLAQGDLGRSLFGNQPVALLIASNIGATIQLTVAAMAIAIALGAPLGILAAVKRGTLWDVAAVVLAMIGVSIPSFWLGLMMIQLFAVTLGWLPIIEERSARGLIMPAAALGLAEAAIIVRLTRATMVEILNADYVRTARAKGLFDSVVLWRHALRNGLLPLITMIGMQFGTLLGGAVVIENVFARQGLGTLVTQAVINRDFPVVQGCVLVAATMYVLVNLAVDVFYTVVDPRIRYS
>NC_009767.1|WP_157042870.1|5028859_5029729_+|ABC-transporter-permease-subunit
MRTDGRSAVLPPRMRRWQRTFWRHRSLLVGSALLAIILFGVAFPSLFTNRNPVVMNIRERLQPPNPIYPFGTDQYGRDMLARVLYGGRISLVMGVAPILIAAGVGGVFGLIAGYYGRWLDAVMMRVMDVWIALPIILLALAIVTALGPGLINIMIAIGIAWIPYYARMVRGIVLSLREYSFIEAARVIGLSDRRILARHILPNTIAPLIVMSSMGIAGAILTGASLSFIGMGPQAPTPEWGLILADGRQFIRLAWWIGFFPGAAIALTVLGANLLGDGLRDWLDPRMRL
>NC_009767.1|WP_012122308.1|5029784_5030951_+|galactonate-dehydratase
MKITRVSTLVVHARMRNWVFVKVETDQDGLYGWGEATLEWKTKGVVGAVEDVSRLIIGEDPRRIEHLYQMMTRQYFWRAGIEGMTAMSGIEQALWDIKGKWLNVPVYELLGGRVRDRIRVYNHLGGGTMEHMYETTDPDLFAERALMVKEQGYTALKFMAVPRTEPVEGMRPVRYAERLVRAVRDAVGDDVDLMVDLHARCASPAMALRYCRAFEPYGLLFFEEPCPSEDIEATAQVTRASNIPIATGERLVGRHQFREVFERRACHIIQPDLSHCGGLWEARKIAAIAETYSMAVAPHNPNGPIATAAAIHFAAATPNWVIQEAISNDVPWRYDVVDSEHQVRDGYIAIPSRPGLGVEVNEGEAARHPWQPELVQRYFHPDGSVADW

Crispr_ID: NC_009767_92

• CRISPR_ID: NC_009767_92
• CRISPR_location: 5059129-5059236
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_92

Consensus_repeat	Method
TGCTTGTCTCTGTGCGCCATACGCGCCTATTCGCAC	CRISPRCasFinder

spacers of NC_009767_92

>92.1|5059165|36|NC_009767|CRISPRCasFinder
GGTCGGTGGACCCGTCGTGGGGATCGGGATTGTCGA

CRISPR arrays and Neighbor proteins around NC_009767_92

CRISPR arrays

The CRISPR arrays of NC_009767_92

>merge|NC_009767|92|5059129-5059236|CRISPRCasFinder
TGCTTGTCTCTGTGCGCCATACGCGCCTATTCGCACGGTCGGTGGACCCGTCGTGGGGATCGGGATTGTCGATGCTTGTCTCTGTGCGTCATACGCGCCTATTCGCAC

>NC_009767|92|83|5059129-5059236|CRISPRCasFinder
TGCTTGTCTCTGTGCGCCATACGCGCCTATTCGCAC	GGTCGGTGGACCCGTCGTGGGGATCGGGATTGTCGA
TGCTTGTCTCTGTGCGTCATACGCGCCTATTCGCAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_083760379.1|5041586_5042582_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009767.1|WP_012122338.1|5073842_5075018_+|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl|CDD|376358
NC_009767.1|WP_012122330.1|5060090_5062253_+|methylmalonyl-CoA-mutase	unknown	unknown	gnl|CDD|376584
NC_009767.1|WP_012122331.1|5062249_5064472_+|methylmalonyl-CoA-mutase	unknown	unknown	gnl|CDD|236508
NC_009767.1|WP_012122323.1|5050358_5052335_+|hypothetical-protein	unknown	unknown	gnl|CDD|379285
NC_009767.1|WP_012122332.1|5064468_5065611_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	unknown	unknown	gnl|CDD|236515
NC_009767.1|WP_012122328.1|5058343_5059072_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|181668
NC_009767.1|WP_012122321.1|5046413_5047814_-|nuclease	unknown	unknown	gnl|CDD|377990
NC_009767.1|WP_157042717.1|5056063_5057131_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009767.1|WP_012122336.1|5069014_5069368_-|DUF983-domain-containing-protein	unknown	unknown	gnl|CDD|368773
NC_009767.1|WP_012122339.1|5075133_5075844_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187595
NC_009767.1|WP_012122320.1|5044426_5045839_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|274522
NC_009767.1|WP_012122334.1|5067111_5068611_+|TM0106-family-RecB-like-putative-nuclease	unknown	unknown	gnl|CDD|274603
NC_009767.1|WP_012122324.1|5052568_5055151_-|hypothetical-protein	unknown	unknown	gnl|CDD|274709
NC_009767.1|WP_012122327.1|5057441_5058293_+|BtpA/SgcQ-family-protein	unknown	unknown	gnl|CDD|223511
NC_009767.1|WP_157042718.1|5066244_5067045_+|metal-dependent-transcriptional-regulator	unknown	unknown	gnl|CDD|224240
NC_009767.1|WP_012122322.1|5048025_5049651_-|DUF3459-domain-containing-protein	unknown	unknown	gnl|CDD|200470
NC_009767.1|WP_012122337.1|5070126_5073753_+|methionine-synthase	unknown	unknown	gnl|CDD|273959
NC_009767.1|WP_012122335.1|5068543_5069011_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122319.1|5042688_5043765_+|IS701-family-transposase	unknown	unknown	gnl|CDD|379252

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_083760379.1|5041586_5042582_-|HAMP-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.52024e-39
NC_009767.1|WP_012122338.1|5073842_5075018_+|class-II-aldolase/adducin-family-protein	gnl|CDD|376358	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain. This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.	4.76499e-17
NC_009767.1|WP_012122330.1|5060090_5062253_+|methylmalonyl-CoA-mutase	gnl|CDD|376584	pfam01642, MM_CoA_mutase, Methylmalonyl-CoA mutase. The enzyme methylmalonyl-CoA mutase is a member of a class of enzymes that uses coenzyme B12 (adenosylcobalamin) as a cofactor. The enzyme induces the formation of an adenosyl radical from the cofactor. This radical then initiates a free-radical rearrangement of its substrate, succinyl-CoA, to methylmalonyl-CoA.	0
NC_009767.1|WP_012122331.1|5062249_5064472_+|methylmalonyl-CoA-mutase	gnl|CDD|236508	PRK09426, PRK09426, methylmalonyl-CoA mutase; Reviewed.	0
NC_009767.1|WP_012122323.1|5050358_5052335_+|hypothetical-protein	gnl|CDD|379285	pfam13598, DUF4139, Domain of unknown function (DUF4139). This family is usually found at the C-terminus of proteins.	5.55746e-07
NC_009767.1|WP_012122332.1|5064468_5065611_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	gnl|CDD|236515	PRK09435, PRK09435, methylmalonyl Co-A mutase-associated GTPase MeaB.	0
NC_009767.1|WP_012122328.1|5058343_5059072_+|SDR-family-oxidoreductase	gnl|CDD|181668	PRK09135, PRK09135, pteridine reductase; Provisional.	6.86973e-90
NC_009767.1|WP_012122321.1|5046413_5047814_-|nuclease	gnl|CDD|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	1.81131e-12
NC_009767.1|WP_157042717.1|5056063_5057131_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	4.2821e-18
NC_009767.1|WP_012122336.1|5069014_5069368_-|DUF983-domain-containing-protein	gnl|CDD|368773	pfam06170, DUF983, Protein of unknown function (DUF983). This family consists of several bacterial proteins of unknown function.	0.00849156
NC_009767.1|WP_012122339.1|5075133_5075844_+|SDR-family-oxidoreductase	gnl|CDD|187595	cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs. Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.42131e-58
NC_009767.1|WP_012122320.1|5044426_5045839_+|FAD-dependent-oxidoreductase	gnl|CDD|274522	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.	5.90428e-57
NC_009767.1|WP_012122334.1|5067111_5068611_+|TM0106-family-RecB-like-putative-nuclease	gnl|CDD|274603	TIGR03491, TIGR03491, RecB family nuclease, putative, TM0106 family. Members of this uncharacterized protein family are found broadly but sporadically among bacteria. The N-terminal region is homologous to the Cas4 protein of CRISPR systems, although this protein family shows no signs of association with CRISPR repeats.	3.93058e-38
NC_009767.1|WP_012122324.1|5052568_5055151_-|hypothetical-protein	gnl|CDD|274709	TIGR03663, TIGR03663, TIGR03663 family protein. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.	9.06697e-08
NC_009767.1|WP_012122327.1|5057441_5058293_+|BtpA/SgcQ-family-protein	gnl|CDD|223511	COG0434, SgcQ, Predicted TIM-barrel enzyme [General function prediction only].	9.00047e-88
NC_009767.1|WP_157042718.1|5066244_5067045_+|metal-dependent-transcriptional-regulator	gnl|CDD|224240	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription].	9.9875e-30
NC_009767.1|WP_012122322.1|5048025_5049651_-|DUF3459-domain-containing-protein	gnl|CDD|200470	cd11331, AmyAc_OligoGlu_like, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomalto-oligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NC_009767.1|WP_012122337.1|5070126_5073753_+|methionine-synthase	gnl|CDD|273959	TIGR02082, Methionine_synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase. This family represents 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), one of at least three different enzymes able to convert homocysteine to methionine by transferring a methyl group on to the sulfur atom. It is also called the vitamin B12(or cobalamine)-dependent methionine synthase. Other methionine synthases include 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase. [Amino acid biosynthesis, Aspartate family].	0
NC_009767.1|WP_012122319.1|5042688_5043765_+|IS701-family-transposase	gnl|CDD|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.41966e-14

Protein sequences

>NC_009767.1|WP_012122328.1|5058343_5059072_+|SDR-family-oxidoreductase
MSLHGKAALVTGGARRLGRAIALALGRAGMRVAIHYHASASAAEEVLAELRATGASCIAIPGDLSRTADCERVVDEVLAQWGGLDLLVNNAGIWGPTPVGSVSEARWDELLNTNLRSMFFIAQRAADALRAASGSIVNIADVGVERPWRNHTPYLVSKGGVVALTRALAKDLAPEVRVNAIAPGPVLLPDDWSAEQAAQVARTTLLRRVGSPDDIAGAVLYLAQAGYVTGVTLPVDGGHLLH
>NC_009767.1|WP_012122327.1|5057441_5058293_+|BtpA/SgcQ-family-protein
MTPPWKQRLDALRIGDLSDIFRTPKPIIGMVHLWPLPGAPGYTGYGMQGIIDRALDDAYALADGGVDGVIVENMWDIPFRAGLHVQPESIAAHAVAAHAVHRAIDLPLGINLVHNGGVALLGIALAAGARFIRVCMFTGAGVWDAGAWDEGCAADLMRRRKELHAEHIKIFADVDKKHSVRFPGIDLATHIEWTRFFGADALIVSGRMTGNAPDLEKVQQAKALCGDRPLLIGSGADERNIAAFMAAADGVIVGSSIKQDGRIENPVEVERVRRFVAAARSRM
>NC_009767.1|WP_157042717.1|5056063_5057131_+|Uma2-family-endonuclease
MTNTTMHVPPASDTSPDADPFRYGWRFVPRPTPDDPHHLEQVPLTLEDVLHPETGDFIVHSDRHETDRMYLTAVLRARLEEAGVAIVLSDVRIAWDIPDLRPHGPDVMVIPGIRKRQDWSTFEVAVEGARPALIIEITSPETRENDLERKVEHYARAGVAQYVIVDDAGKGRGKRRLRLLDYRLEAGMYRLHPSDAAGRVHLAIADVWLGVEGDHVVCYDDHGVAFGDYATVVRQAADAEERARLEAQARQEAEERARREAERAQREAERARREAERAQREATARAAEAQARQEAEERARREAERARREAAARAAEAQARQEAEERARREAEERAAVAARLRALEAELRRMRSGD
>NC_009767.1|WP_012122324.1|5052568_5055151_-|hypothetical-protein
MRWLSLQSARITSSVVLDSVLLLLLAILPLILGARLARLDQRLSVEDSNARRVLVGFYDVERNPTDLFRWSRPEAALFLFGFDGRPARVMVRLAAPRDTADPPVLSVSMRGRPVGAFAVAPGWRCYYLLTPTDPAGDTPLLLRTAAYRPPDDGRDLGVALAEFAAWPITGSAWLPPPIRTIFLVSFPFLIWLIFVWHAPHRASGATLLYRSTVALLSIAGGGAAAFPAEAGYLLPTVGWPWWPLLPLALALAWRPVRLLLARTAKRLRATGISAAWGGAALALALIVALRLGLPPLAGMSGLVAAVALTILALYRDEGLTFPAEQSMQRNEVLALAVVTVAALALRLYRLDDLPSGMWRDEARHGLLALRIWSDSTYRPVYVVAGADLPALLFYLMAPVLALTGPGVGAARLVSALAGALMPLALWWAARPILGGRAALYGAAFLAWASWGLSMSRWAFPATLDHLLELTAIGVMWRALGQPAPWRAAAGMALAGALAALAAYAYHTGRLAPLVFVALTAVRLGRDAGAWRRALPALGAAATAGVIVLLPLLAFIAGDFEGYNRRTGMVAISNAQNLEKRTVALVLDNIARYLGMWHIAGDPNGRHHAPGAPMLDPLAGTCFALGVGLALVGRRSKAFVPLLWLGLALIPGVLSTNAPHAMRSLGALAPSCMLAGMALDTLIRATNSAGSHLWRRIAPAVVTGTLVVSLSFNAWLYFVAMPGNPAVYNEFDQTETAVGRVARMAATSNDPRLRSIRVFVDRRLIERDTVRFLTGDLIIGVFDGVRLSETVTGDALLILPPDVSDGDRKAALEALGLAAHELTPPLLPNGEAPLFLAYGVGDGTQRLLNETFSPDSLPGGK
>NC_009767.1|WP_012122323.1|5050358_5052335_+|hypothetical-protein
MPDLPIRRMLVYRHGVGYFERRGPITGTELRLTFPREAMDDILKSLIVLDLGEGQVLGVDIETPEDRAKQIERGSIHLSNTRSLLDLLRDLRGRNVRLQIEHERRHGDAADEVIEGAIIGIDLDEQEPLDKPLLSLYLSKQRNVRTIPVRRIAHLVILDDRAAADMAYFLRAAQSEEDRRSAIVRLSEGDHDMLVGYIAPAPSWRVSYRLLAEPKPDGNDSANGGGRSAGAQVAVLLQGWGLFDNQLDEDLESIELTLVAGMPVSFRYRLYEPHTPERPMVQDDVRTVAAPIEFQANRAIPSLMEVAPDLDEFALGEASALRMENLEQSIEAAGVGEERGALFQYRVVHPVSVARGRSAMVPIVSRRLDGRKELLYNGRKLPRHPVASLRMQNETGLTLERGPVTVVEHGDYAGEAVLPFTRAGAEMIIAYAVELGVTISEERHHQRTMAGLSIHKEYAVFEEWDVQQMRYRITSTLPDAVNIVIEQERLKGYDLFDTPAPDEEAHNVARWTVRCPSGVETVFMVNERCKRSRHEEVRKLDMHRLQSFLSDRYLDQATYRALERILSLYDQVAKRRATLQEIAQEQQKILARQQQIQANLGPLGREGSERALRERYVAQLNQLEDRLNDQLAREQETRKAIERLEQEAAQALAALSKP
>NC_009767.1|WP_012122322.1|5048025_5049651_-|DUF3459-domain-containing-protein
MTKQPAGHLWWQRGVIYQIYPRSFQDSNGDGVGDLRGIRSRLDYLVDLGIDAIWLSPIFPSPMADFGYDVADYCDIHPLFGTLADFDALVADAHRRNLKVILDFVPNHTSDQHPWFIESRSSRDNPKRDWYIWRDPAPDGGPPNNWLSYFGGSAWEYDATTGQYYLHLFLKEQPDLNWRNPQVQAAMLDVMRFWLDRGVDGFRVDVMWLMIKDAQFRDNPPNPAWKPGMMPHMRILEAWSADQPEVHQIVAMMRRVLDSYDERMMVGEIYLPYDRLMHYYGTPESPEAHLPFNFALVLLPWDAHTIAQTIAAYEALLPPHGWPNWVLGNHDQPRIASRVGEAQARVAAMLLLTLRGTPTMYYGDEIGMRNVPIPPDRVQDPFEKNVPGEGHGRDPQRTPMQWDASEYAGFSKVQPWLPLADDYRQRNVAAQRNAPHSMLSLYRRLLTLRRSEPALSIGSYQAIAVEGDDTARQSVLAFVREVNGCRFLVALNFASHPARLSLTTIGEGTIALSTHLDRGGSTVQGDLELRADEGVIIALAP
>NC_009767.1|WP_012122321.1|5046413_5047814_-|nuclease
MAVQVWIGEKPEHANERRAIMALARGLDRLDGLYLILANFTVGGRSIDLVIVKQDAVFIIELKHCDGRVFGDVNGPWFVEGSNGERKRLNPGRKNPYNQVISYYYNLVNFLNDHRTELLPPQKAKTVDFRTCRRLVVIAPTLQEGSHVETDWKVDLKGLDELPAYLVTERSSEIDLTDEEMLRIPELLHLTRWTEINALLAGVLPNLDDSPAVDRPVSRESPVITGPVGSVTALAAPSAEASTPATQAQPVVASVSLSQRLSRLWQSWAGRIALASSLIVVVLIGMIFSQGRALPRSDQPAQSMVVSTSLPAGGADAGAISPVSSCIWSGFQPVGRRMINGSWENVGVGGNAPGLTPDVVVTLEEVEFCDGRITLRWSLRNNLSDQHVEMPLTAENIEVRDSVGTRYLVTDDLSQPRGLRALPGERVRGSAVIDRPVNLNASTLVVVLKKLPFGETTWLVPTPGAG
>NC_009767.1|WP_012122320.1|5044426_5045839_+|FAD-dependent-oxidoreductase
MTQRSITTRALESVAALTASTWPLMARLLPERMEFDDTLSIWHAGTPDYQPRAPLRGEITADLAIIGGGFTGVSAAYHIAQRFPQQRIVLLEATSLANGASGRNGGLALNWINGIDTSDPELTQKVYQLTSAGLCAIRTLIERHRLLVDHRFDGTLTLHTSPKRAEAAHAEAEYLRALGIPVQFLHRNELASHFDARGVYGATLEPETGQINGAQFVRELRPILEARGVAVYEQTPVLRLQTGRIIRLTTPQGEVHTPAVVLATNGYTSKLGLFRDALFPLHSSVFATAPLTPEQRQQLGWRAFAGFADDLDRISYGSLTLTGHLIFGGGSNQAYAYLFNNRTRLPAESAVARRAQTAIARTLAGYFPSTATLPIVRRWSGVLGITLNRQPLWGRWGEERNIYYALGYSGHGITLANLAGEFIADLYGGDDSRWRWLPFYQSRYPPIPPEPFRWLGYQVFTRLTGRSPRV
>NC_009767.1|WP_012122319.1|5042688_5043765_+|IS701-family-transposase
MKNDKQLLDLYSDYLISAFGQTTATGLSSLLDGEISHDRVQRLLAGKEQTSADLWRLVKPHVRQIESEDGVVIVDDSIAEKPYTDENDIVCWHYDHSQQRTVKGINFVTCLYHSQGVSLPVGFELVRKTERYTDPKTGKEKRRSDKTKNEMYRDLLQQAVKNQIPFKYALNDIWFASAENMNFVKLTLKKEFVMPLTGNRKVALSVNAKQPGRYQRVDTLELEPMKPVTVYLEGVGFALLLIKQVFTNEDGSTGIQYLVASDTTRDGNGIAAIYHKRWNVEPYHKSLKQNASLEKSPTQTVTTQTNHFFAALCGYIKLELLKGATKLNHCALKSKLYLHAIHAAYAKLQELNPVQLAA
>NC_009767.1|WP_083760379.1|5041586_5042582_-|HAMP-domain-containing-protein
MVAQLRTSDHIYGDFQEEVAEQHIPVVDQGRALLQAVQDLHHRLSFGIDTPTDAQREAFYQEIERIEEQRETFTKQANAHLAGIRTVAQQHIEGDVRLTFVGIAIALAAMVALTIGVLWLIERHIVRPLRSITNAASRLAEGRLDGELAITSNDEIGVLQQTFNRMAATIRRQTGDLEIHYRQVTQARDALEAAHRQAVEQLAIIQRQQEAIRKLSVPVLPVSRDTPVMPLVGALDSARLIQVQEQALERLAATRARRLLLDITGVPIVDSHVAQGLIRVVQAAHLLGAEVMLIGIRPEVAQSIVGLGISLSNIRTCSDLQSALAQKGGRL
>NC_009767.1|WP_012122330.1|5060090_5062253_+|methylmalonyl-CoA-mutase
MSDEVQTTMAGDAAVQPLFDMFPPATYDEWRAAAEKTLKGAPFEKRLITRTYEQISLQPIYNAEDIASLPHITSLPGFAPFVRSTRTLGYVIGRWEVCQELPYPTPREVNQAAHDDLPRGLTAINVPLDRATLHGLDPDAAPVEWIGAGGMSLASVEDAATLCDGMALDRTPLLVAAGADALPVATLILAAAERYGIAHDQVQGCIGADPLGALAMFGTLPLLLERCYDAMARWTAWAQTHAPRLRTIMVATHGYHNGGATVVQDLACALATGVAYLRAMQERGLDIDGVAPRMQFAFSIGSQFFMEIARLRAARMLWARVVAAFGGNDESQKMRIHGRTSAWTKARFDAYNNMLRATGEAMAGVMGGVDSLHVSHFDEALGLPDEFSRRIARNVQIILQEECNFIRLIDPPGGSWAIESLTDQVAQKAWALFQEIERRGGMADALAAGFPQSAIAATRNERFSAIAQRREVIIGVNMYPNLKEKPLTVRPVDHAAVQAERAADVRRVRQMRDSQACQDALDALVSAPQDRLVELALAAARTGATLGDLAAALASGDTTGPTIESIPAHRAAEQFETLRMAADAYAARTGARPKVFLANMGPIPQHKARADFSTGFFEAGGFEVIGNDGFTTVEEAAQAALASGAGIVTICSTDDTYPEIVPPLTNLIKSNRPDMTVVLAGYPADQVEAHRAAGVDEFIHLRANCYETLVRLQQLKGVVA
>NC_009767.1|WP_012122331.1|5062249_5064472_+|methylmalonyl-CoA-mutase
MKTPDFTTLPYRDGAAAPTLAQWRERAEREAGKPLDALVWRTMEQIDVRPLYTADDIAGLEHLRFTAGIPPYLRGPYPTMYVTQPWTIRQYAGFSTAEASNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVVGDVGKAGVAIDSVLDMKILFDGIPLDQMSVSMTMNGAVIPVMAFYIVAAEEQGVRQEQLTGTIQNDILKEYMVRNTYIYPPEPSMRIIADIFAYTAKHMPKFNSISISGYHMQEAGATADLELGYTLADGLEYVRAGLKAGLSIDAFAPRISFFWAIGMNYFMEIAKMRAARLLWAKIIKQFDPKDVRSMALRTHCQTSGWSLTEQDPFNNVARTCIEAMAAALGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQEETGICKIVDPWGGAYYLEWLTDALARRAWAHIQEVEELGGMAKAIEAGVPKLRIEEAAARRQAHIDSGRETIVGVNKYRLPYEAPIEILEVDNTAVRQAQIERLKKLRAERDEARTQAALDALTRVAATGEGNLLEAAVEAARARATLGEISMAMEKVFGRYKATIRAVSGVYGSEFSDVEQIHHVRALADAFAAREGRRPRILVAKIGQDGHDRGAKVVATAFADLGFDVDIGSLFQTPDEVARQAVENDVHVVGISSLAAGHKTLLPQLVEELRKLGRDDILVVIGGVIPAQDYEFLREHGAAMIFGPGTIIPVAAEKLLLELQRRLHGDGVETGPTVQTRDAA
>NC_009767.1|WP_012122332.1|5064468_5065611_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB
MSNGQHSASSEAMPFGLSVVEGVTGGHDGLPGQQVHALAAPPSPRRRLLTLDEYVAGVRGGDRSILARAITLIESNAPAHMALAQEVLRALLPYTGGALRVGITGVPGVGKSTFIEALGMMLCERGHRVAVLAVDPSSSISRGSILGDKTRMERLSRHPNAYIRPSPTGGSLGGVARKSRETLLLCEAAGFDIVLVETVGVGQSEIAVRGMVDFFLLLMLAGAGDELQGIKKGIIELADALLITKADGDNRARALAAQAEYTHALRYLTPATEGWRPRAYICSAQTGEGIAEIWREIERFRDETTASGVFAARRRDQARDWVYTLIEDHLRTRFFGHPVVQGQLPAIEQAVVEGTLPVTTAVQTLIQAFESALQGEGTGS
>NC_009767.1|WP_157042718.1|5066244_5067045_+|metal-dependent-transcriptional-regulator
MLPTDVWHAQTRQEGCVSESVEMYLVMTALLRSAPDQPVPLSLLASKLGVSQVSANEMCHRLEERGLLSYQPYKGVTLTPDGEEWAQRILSRRRLWVIFLVENLGIDPEEADTLACQLEHITSERLVAALKAFLERDPEARSSINRTPQPLTACTAGMRGVVATIDVEPAAAAFLAQQGVVPGADVGVLAVGIDGAVLLQVDDYQVALASALAGRITLAAGSAAHTARQAAWRRCSAFWSCVRGEAPPCPIESVADESEVAALARR
>NC_009767.1|WP_012122334.1|5067111_5068611_+|TM0106-family-RecB-like-putative-nuclease
MRCERRVWLDGRSAQPPQTAPTADARARMTLRANHKCHILAAIEGVEDFSELPWNERVTQTRLAMQRGAAMISGAALEAPIGGRLLHGAPDLLQRQTTAASGAWIYEPIAIVLHTRPTRWERLLLDSWRWLVRQTQGWDHDPPGELWLGANGYRPVCIKRQTASLAAFTAQIRRAIAIAAGEAPPIWFDSDHCPFCPWRTSCDAAAHDTHDIALIPRLSRRQGSALRRLGIHRIDQVITLDPATMTTLPDHSSATEARLRRQAQALLTDQPLPVSAAIPSLPQVRLFLDIESDPQTREPWAFGLAGAPGDRFVIVVEPLVAGSDVRLNGIPVIGVHSAHEGWQRVLHAVRATGGALAHWGEAERLMLEQSADPHTYQELIPLMIDAQRELYKRVVLPTPRQSDQRGGGLKAAARWLGWRWSPGADHWTLAWEAYRQWRAQPSPANVFDRLTPAIVYLATDVEALAAVWRWLDAFVASINATSAPQDGHADRDTATNREC
>NC_009767.1|WP_012122335.1|5068543_5069011_-|hypothetical-protein
MSLHEILRDVIVRLAVERPATSRSTTEWAETLAASGAKLKARMTAIADTPANCRQLRHIIGLERWGQRRMRVALGEPFINDEMDEYEPPVDLRFPDLIDVFLNTRDETVNIARRCAADPRTESTRVQHNQLGPLSIRGWLRYLDLHARLEARWLH
>NC_009767.1|WP_012122336.1|5069014_5069368_-|DUF983-domain-containing-protein
MQRVFRVLFFSLLLTCPACQRGRMFRSRFTMNVRCPVCGIVFERGAGEFSGGMAINTVATSSVAVSGAALAFFTDMPVWTLIVALTLVSVLFALWFYRYARALWAGILYLTGSIRED
>NC_009767.1|WP_012122337.1|5070126_5073753_+|methionine-synthase
MKKPTYLEALCERVLIYDGAMGTSIDTFHLTAADYGGEQTFGARDYLVITRPDVIEQIHASFLEAGADVLETCTFQSTRPRLEEWGLADQTHAINVAAARLARRVADAFEARDGRPRYVAGSMGPTGKLPSSDDPALSDVTFDQLSDIFYEQATALIEGGVDVLLVETSVDILEVKAALDGIRRAKADLNRPDVAVQAQVFLDLSGKMLLGTEVPAIIATLEAMPVDVIGLNCSTGPEHMREAIRYMTRHSRKPISCIPNAGLPIEVNGETVYPMEPEPFARILGEYVHEYGVAVVGGCCGTRPAHIRRLREVVGFVPPKVRDIEYIPSVSSGVRAAALRQEGTLTIIGERVNTLGSRKVKRLLLNEDYDGVLEVAREQVDSGAHLLDVCVAMTERSDEREMMVKLVKKLTMNVELPLVIDTTEADVLEAALAIYPGRAVVNSVSLEGGRGDKIDRTMPLVARYGAATIAMTIDEEGMAHTAERKLAIAQRIAQIAQDEYGVPNEALIFDVLTFPITTGQAELRRAAIETIEGIRLVKQHIPGCFTTLGVSNLSFGVAPHARATLNSVFLKHAVDAGLDTAIINPAHVTPYAEIPPEHIKVCEDLIFDRDDQALARFIQFFEEHAADAKTERADPTEGMTAAQRIHWKIVHRKKEGIEADIDQVIAERIGDMEARAGNGVSNPDRRSHESLVASPFRNAAAVDVLNTVLLPAMKEVGDLFGAGQLILPFVLQSAEVMKRAVAHLEQYLEKLEGVTKGKIVLATVYGDVHDIGKNLVHTILANNGYTVYDLGKQVPINTIIEKAVEVNADAIGLSALLVSTSKQMPLCVQELYRRGLKFPVLVGGAAINKQYGQRILFVDDNTPYEPGVFYCKDAFEGLETVDALADPTTRAAFVERTKAEAAEALGKKQRGRVALAELGRATLSDAAKVRSAVRTDVPVPTPPFWGAKVVRRIKLADVVECLDRNALYRLQWGAKNAKGEEWERLKAEFDAKVRDLVREAERDGWLEPQVVYGYYPCQSDGHEVIVYDPPSTLNGAQPRELTRFVFPRQPERERLCLADYFRSRESGEYDVVALQIVTMGRKVDDLTETLQHAGDYARAYFIHGLGVSLAEALAEYTNRLIRQQLGLKGTQGKRYSWGYPACPDLEEHEKLFRVLPADQIGVSLTEAWQLVPEQSTAAIVIHHPEAKYFSIGSARERAEEDVAETLSI
>NC_009767.1|WP_012122338.1|5073842_5075018_+|class-II-aldolase/adducin-family-protein
MHQDTWTPLIGPRLAPDEHLTFTIAGNAQNAFAPWFAQGLCAALERHGHAFISADASSDDETIESPPARLVLNLCDIDRPRPIHRRGQGTFVVTIVEGEENQRDVMKAAYPLIVRSLANMVIYNTRVNGVLESHFVTIEQGHYTVRLDGDEQDFFDQIYRRIQPLACSHLVINNKFTPDLPDYLWNGDEATRQISWAGRQLDSLGLLPAAIPIQEYLSERELRHVKRLYGIGGLSYGNLSARAPHNPEYFWMSASGVDKSRLDIVGRDILLVTGYDPENLQINLSVPPHIEPRRVSVDAIEHYMIYREHPQVHAIIHIHAWWRDPIPSTQVNYPCGTYELAAEVAELVRQAPDPSRAVIGLKNHGLTITGHSIPEIFARIEGMIVPQVPMS
>NC_009767.1|WP_012122339.1|5075133_5075844_+|SDR-family-oxidoreductase
MLAGKIAIVTGGTGALGGAVVQALLNAGATVWVPYVGTDDLDRLRKRITLPTDAILDGAPLDLTDEAAVYQAYGQVAGTYGGIDILVNIAGGFAGGEPVHRTPWSLWQQQLDINLKTAVISCAAAVPHMLTRGGAIVNVSSRTATQNARNVAAYGAAKRAVLQLTEALAAELRDSNITANAILPSVIDTPANRAADPNADHSRWVAPEAIARVILFLVGPDARIISGAAIPVYGRA

Crispr_ID: NC_009767_93

• CRISPR_ID: NC_009767_93
• CRISPR_location: 5069652-5069801
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_93

Consensus_repeat	Method
GACACGAAGGACATGCGCTGCATGTTCATTCCCCTTCGTGCGCTTCGGGTCC	CRISPRCasFinder

spacers of NC_009767_93

>93.1|5069704|46|NC_009767|CRISPRCasFinder
CTGGTGTTTACTTCACGGCACAAAGCAACCACGAAGGTCACCAAGA

CRISPR arrays and Neighbor proteins around NC_009767_93

CRISPR arrays

The CRISPR arrays of NC_009767_93

>merge|NC_009767|93|5069652-5069801|CRISPRCasFinder
GACACGAAGGACATGCGCTGCATGTTCATTCCCCTTCGTGCGCTTCGGGTCCCTGGTGTTTACTTCACGGCACAAAGCAACCACGAAGGTCACCAAGAGACACGAAGGACATGCGCTGCATGTTCATTCCCCTTCGTGCGCTTCGAGTCC

>NC_009767|93|84|5069652-5069801|CRISPRCasFinder
GACACGAAGGACATGCGCTGCATGTTCATTCCCCTTCGTGCGCTTCGGGTCC	CTGGTGTTTACTTCACGGCACAAAGCAACCACGAAGGTCACCAAGA
GACACGAAGGACATGCGCTGCATGTTCATTCCCCTTCGTGCGCTTCGAGTCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122338.1|5073842_5075018_+|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl|CDD|376358
NC_009767.1|WP_012122330.1|5060090_5062253_+|methylmalonyl-CoA-mutase	unknown	unknown	gnl|CDD|376584
NC_009767.1|WP_012122345.1|5085329_5087090_+|DUF2079-domain-containing-protein	unknown	unknown	gnl|CDD|370724
NC_009767.1|WP_012122331.1|5062249_5064472_+|methylmalonyl-CoA-mutase	unknown	unknown	gnl|CDD|236508
NC_009767.1|WP_012122340.1|5076138_5076996_-|hypothetical-protein	unknown	unknown	gnl|CDD|183140
NC_009767.1|WP_012122334.1|5067111_5068611_+|TM0106-family-RecB-like-putative-nuclease	unknown	unknown	gnl|CDD|274603
NC_009767.1|WP_157042871.1|5089464_5091633_+|hypothetical-protein	unknown	unknown	gnl|CDD|287142
NC_009767.1|WP_012122335.1|5068543_5069011_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122332.1|5064468_5065611_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	unknown	unknown	gnl|CDD|236515
NC_009767.1|WP_012122339.1|5075133_5075844_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187595
NC_009767.1|WP_012122342.1|5078460_5081109_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|237526
NC_009767.1|WP_012122327.1|5057441_5058293_+|BtpA/SgcQ-family-protein	unknown	unknown	gnl|CDD|223511
NC_009767.1|WP_012122337.1|5070126_5073753_+|methionine-synthase	unknown	unknown	gnl|CDD|273959
NC_009767.1|WP_157042718.1|5066244_5067045_+|metal-dependent-transcriptional-regulator	unknown	unknown	gnl|CDD|224240
NC_009767.1|WP_012122344.1|5082543_5084841_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122336.1|5069014_5069368_-|DUF983-domain-containing-protein	unknown	unknown	gnl|CDD|368773
NC_009767.1|WP_012122343.1|5081312_5082392_-|glycosyltransferase	unknown	unknown	gnl|CDD|340828
NC_009767.1|WP_012122329.1|5059226_5059703_-|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl|CDD|236483
NC_009767.1|WP_012122328.1|5058343_5059072_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|181668
NC_009767.1|WP_049768921.1|5077244_5078519_+|hypothetical-protein	unknown	unknown	gnl|CDD|226217

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122338.1|5073842_5075018_+|class-II-aldolase/adducin-family-protein	gnl|CDD|376358	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain. This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.	4.76499e-17
NC_009767.1|WP_012122330.1|5060090_5062253_+|methylmalonyl-CoA-mutase	gnl|CDD|376584	pfam01642, MM_CoA_mutase, Methylmalonyl-CoA mutase. The enzyme methylmalonyl-CoA mutase is a member of a class of enzymes that uses coenzyme B12 (adenosylcobalamin) as a cofactor. The enzyme induces the formation of an adenosyl radical from the cofactor. This radical then initiates a free-radical rearrangement of its substrate, succinyl-CoA, to methylmalonyl-CoA.	0
NC_009767.1|WP_012122345.1|5085329_5087090_+|DUF2079-domain-containing-protein	gnl|CDD|370724	pfam09852, DUF2079, Predicted membrane protein (DUF2079). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.36731e-100
NC_009767.1|WP_012122331.1|5062249_5064472_+|methylmalonyl-CoA-mutase	gnl|CDD|236508	PRK09426, PRK09426, methylmalonyl-CoA mutase; Reviewed.	0
NC_009767.1|WP_012122340.1|5076138_5076996_-|hypothetical-protein	gnl|CDD|183140	PRK11447, PRK11447, cellulose synthase subunit BcsC; Provisional.	5.88727e-06
NC_009767.1|WP_012122334.1|5067111_5068611_+|TM0106-family-RecB-like-putative-nuclease	gnl|CDD|274603	TIGR03491, TIGR03491, RecB family nuclease, putative, TM0106 family. Members of this uncharacterized protein family are found broadly but sporadically among bacteria. The N-terminal region is homologous to the Cas4 protein of CRISPR systems, although this protein family shows no signs of association with CRISPR repeats.	3.93058e-38
NC_009767.1|WP_012122328.1|5058343_5059072_+|SDR-family-oxidoreductase	gnl|CDD|181668	PRK09135, PRK09135, pteridine reductase; Provisional.	6.86973e-90
NC_009767.1|WP_012122332.1|5064468_5065611_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	gnl|CDD|236515	PRK09435, PRK09435, methylmalonyl Co-A mutase-associated GTPase MeaB.	0
NC_009767.1|WP_012122339.1|5075133_5075844_+|SDR-family-oxidoreductase	gnl|CDD|187595	cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs. Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.42131e-58
NC_009767.1|WP_012122342.1|5078460_5081109_-|PAS-domain-containing-protein	gnl|CDD|237526	PRK13837, PRK13837, two-component system VirA-like sensor kinase.	3.96008e-69
NC_009767.1|WP_012122327.1|5057441_5058293_+|BtpA/SgcQ-family-protein	gnl|CDD|223511	COG0434, SgcQ, Predicted TIM-barrel enzyme [General function prediction only].	9.00047e-88
NC_009767.1|WP_012122337.1|5070126_5073753_+|methionine-synthase	gnl|CDD|273959	TIGR02082, Methionine_synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase. This family represents 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), one of at least three different enzymes able to convert homocysteine to methionine by transferring a methyl group on to the sulfur atom. It is also called the vitamin B12(or cobalamine)-dependent methionine synthase. Other methionine synthases include 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase. [Amino acid biosynthesis, Aspartate family].	0
NC_009767.1|WP_157042718.1|5066244_5067045_+|metal-dependent-transcriptional-regulator	gnl|CDD|224240	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription].	9.9875e-30
NC_009767.1|WP_157042871.1|5089464_5091633_+|hypothetical-protein	gnl|CDD|287142	pfam10131, PTPS_related, 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein. This domain is found in various bacterial hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. The exact function of the domain has not, as yet, been established.	0.000534988
NC_009767.1|WP_012122336.1|5069014_5069368_-|DUF983-domain-containing-protein	gnl|CDD|368773	pfam06170, DUF983, Protein of unknown function (DUF983). This family consists of several bacterial proteins of unknown function.	0.00849156
NC_009767.1|WP_012122343.1|5081312_5082392_-|glycosyltransferase	gnl|CDD|340828	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.	4.08074e-35
NC_009767.1|WP_012122329.1|5059226_5059703_-|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl|CDD|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	3.58843e-88
NC_009767.1|WP_049768921.1|5077244_5078519_+|hypothetical-protein	gnl|CDD|226217	COG3693, XynA, Beta-1,4-xylanase [Carbohydrate transport and metabolism].	9.80665e-05

Protein sequences

>NC_009767.1|WP_012122336.1|5069014_5069368_-|DUF983-domain-containing-protein
MQRVFRVLFFSLLLTCPACQRGRMFRSRFTMNVRCPVCGIVFERGAGEFSGGMAINTVATSSVAVSGAALAFFTDMPVWTLIVALTLVSVLFALWFYRYARALWAGILYLTGSIRED
>NC_009767.1|WP_012122335.1|5068543_5069011_-|hypothetical-protein
MSLHEILRDVIVRLAVERPATSRSTTEWAETLAASGAKLKARMTAIADTPANCRQLRHIIGLERWGQRRMRVALGEPFINDEMDEYEPPVDLRFPDLIDVFLNTRDETVNIARRCAADPRTESTRVQHNQLGPLSIRGWLRYLDLHARLEARWLH
>NC_009767.1|WP_012122334.1|5067111_5068611_+|TM0106-family-RecB-like-putative-nuclease
MRCERRVWLDGRSAQPPQTAPTADARARMTLRANHKCHILAAIEGVEDFSELPWNERVTQTRLAMQRGAAMISGAALEAPIGGRLLHGAPDLLQRQTTAASGAWIYEPIAIVLHTRPTRWERLLLDSWRWLVRQTQGWDHDPPGELWLGANGYRPVCIKRQTASLAAFTAQIRRAIAIAAGEAPPIWFDSDHCPFCPWRTSCDAAAHDTHDIALIPRLSRRQGSALRRLGIHRIDQVITLDPATMTTLPDHSSATEARLRRQAQALLTDQPLPVSAAIPSLPQVRLFLDIESDPQTREPWAFGLAGAPGDRFVIVVEPLVAGSDVRLNGIPVIGVHSAHEGWQRVLHAVRATGGALAHWGEAERLMLEQSADPHTYQELIPLMIDAQRELYKRVVLPTPRQSDQRGGGLKAAARWLGWRWSPGADHWTLAWEAYRQWRAQPSPANVFDRLTPAIVYLATDVEALAAVWRWLDAFVASINATSAPQDGHADRDTATNREC
>NC_009767.1|WP_157042718.1|5066244_5067045_+|metal-dependent-transcriptional-regulator
MLPTDVWHAQTRQEGCVSESVEMYLVMTALLRSAPDQPVPLSLLASKLGVSQVSANEMCHRLEERGLLSYQPYKGVTLTPDGEEWAQRILSRRRLWVIFLVENLGIDPEEADTLACQLEHITSERLVAALKAFLERDPEARSSINRTPQPLTACTAGMRGVVATIDVEPAAAAFLAQQGVVPGADVGVLAVGIDGAVLLQVDDYQVALASALAGRITLAAGSAAHTARQAAWRRCSAFWSCVRGEAPPCPIESVADESEVAALARR
>NC_009767.1|WP_012122332.1|5064468_5065611_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB
MSNGQHSASSEAMPFGLSVVEGVTGGHDGLPGQQVHALAAPPSPRRRLLTLDEYVAGVRGGDRSILARAITLIESNAPAHMALAQEVLRALLPYTGGALRVGITGVPGVGKSTFIEALGMMLCERGHRVAVLAVDPSSSISRGSILGDKTRMERLSRHPNAYIRPSPTGGSLGGVARKSRETLLLCEAAGFDIVLVETVGVGQSEIAVRGMVDFFLLLMLAGAGDELQGIKKGIIELADALLITKADGDNRARALAAQAEYTHALRYLTPATEGWRPRAYICSAQTGEGIAEIWREIERFRDETTASGVFAARRRDQARDWVYTLIEDHLRTRFFGHPVVQGQLPAIEQAVVEGTLPVTTAVQTLIQAFESALQGEGTGS
>NC_009767.1|WP_012122331.1|5062249_5064472_+|methylmalonyl-CoA-mutase
MKTPDFTTLPYRDGAAAPTLAQWRERAEREAGKPLDALVWRTMEQIDVRPLYTADDIAGLEHLRFTAGIPPYLRGPYPTMYVTQPWTIRQYAGFSTAEASNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVVGDVGKAGVAIDSVLDMKILFDGIPLDQMSVSMTMNGAVIPVMAFYIVAAEEQGVRQEQLTGTIQNDILKEYMVRNTYIYPPEPSMRIIADIFAYTAKHMPKFNSISISGYHMQEAGATADLELGYTLADGLEYVRAGLKAGLSIDAFAPRISFFWAIGMNYFMEIAKMRAARLLWAKIIKQFDPKDVRSMALRTHCQTSGWSLTEQDPFNNVARTCIEAMAAALGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQEETGICKIVDPWGGAYYLEWLTDALARRAWAHIQEVEELGGMAKAIEAGVPKLRIEEAAARRQAHIDSGRETIVGVNKYRLPYEAPIEILEVDNTAVRQAQIERLKKLRAERDEARTQAALDALTRVAATGEGNLLEAAVEAARARATLGEISMAMEKVFGRYKATIRAVSGVYGSEFSDVEQIHHVRALADAFAAREGRRPRILVAKIGQDGHDRGAKVVATAFADLGFDVDIGSLFQTPDEVARQAVENDVHVVGISSLAAGHKTLLPQLVEELRKLGRDDILVVIGGVIPAQDYEFLREHGAAMIFGPGTIIPVAAEKLLLELQRRLHGDGVETGPTVQTRDAA
>NC_009767.1|WP_012122330.1|5060090_5062253_+|methylmalonyl-CoA-mutase
MSDEVQTTMAGDAAVQPLFDMFPPATYDEWRAAAEKTLKGAPFEKRLITRTYEQISLQPIYNAEDIASLPHITSLPGFAPFVRSTRTLGYVIGRWEVCQELPYPTPREVNQAAHDDLPRGLTAINVPLDRATLHGLDPDAAPVEWIGAGGMSLASVEDAATLCDGMALDRTPLLVAAGADALPVATLILAAAERYGIAHDQVQGCIGADPLGALAMFGTLPLLLERCYDAMARWTAWAQTHAPRLRTIMVATHGYHNGGATVVQDLACALATGVAYLRAMQERGLDIDGVAPRMQFAFSIGSQFFMEIARLRAARMLWARVVAAFGGNDESQKMRIHGRTSAWTKARFDAYNNMLRATGEAMAGVMGGVDSLHVSHFDEALGLPDEFSRRIARNVQIILQEECNFIRLIDPPGGSWAIESLTDQVAQKAWALFQEIERRGGMADALAAGFPQSAIAATRNERFSAIAQRREVIIGVNMYPNLKEKPLTVRPVDHAAVQAERAADVRRVRQMRDSQACQDALDALVSAPQDRLVELALAAARTGATLGDLAAALASGDTTGPTIESIPAHRAAEQFETLRMAADAYAARTGARPKVFLANMGPIPQHKARADFSTGFFEAGGFEVIGNDGFTTVEEAAQAALASGAGIVTICSTDDTYPEIVPPLTNLIKSNRPDMTVVLAGYPADQVEAHRAAGVDEFIHLRANCYETLVRLQQLKGVVA
>NC_009767.1|WP_012122329.1|5059226_5059703_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MSDLTHLDETGKARMVDVGAKDETLREAVVRGEVHMRPETLQRLAAGDMPKGDALATARIAGIMAAKRAPDLIPLCHPLLLTHVAVDVRLDAATSTVQIEATVRTVGKTGVEMEALTAVSVAALTVYDMCKAIDRTMQIGAIRLVRKSGGRSGEIVCE
>NC_009767.1|WP_012122328.1|5058343_5059072_+|SDR-family-oxidoreductase
MSLHGKAALVTGGARRLGRAIALALGRAGMRVAIHYHASASAAEEVLAELRATGASCIAIPGDLSRTADCERVVDEVLAQWGGLDLLVNNAGIWGPTPVGSVSEARWDELLNTNLRSMFFIAQRAADALRAASGSIVNIADVGVERPWRNHTPYLVSKGGVVALTRALAKDLAPEVRVNAIAPGPVLLPDDWSAEQAAQVARTTLLRRVGSPDDIAGAVLYLAQAGYVTGVTLPVDGGHLLH
>NC_009767.1|WP_012122327.1|5057441_5058293_+|BtpA/SgcQ-family-protein
MTPPWKQRLDALRIGDLSDIFRTPKPIIGMVHLWPLPGAPGYTGYGMQGIIDRALDDAYALADGGVDGVIVENMWDIPFRAGLHVQPESIAAHAVAAHAVHRAIDLPLGINLVHNGGVALLGIALAAGARFIRVCMFTGAGVWDAGAWDEGCAADLMRRRKELHAEHIKIFADVDKKHSVRFPGIDLATHIEWTRFFGADALIVSGRMTGNAPDLEKVQQAKALCGDRPLLIGSGADERNIAAFMAAADGVIVGSSIKQDGRIENPVEVERVRRFVAAARSRM
>NC_009767.1|WP_012122337.1|5070126_5073753_+|methionine-synthase
MKKPTYLEALCERVLIYDGAMGTSIDTFHLTAADYGGEQTFGARDYLVITRPDVIEQIHASFLEAGADVLETCTFQSTRPRLEEWGLADQTHAINVAAARLARRVADAFEARDGRPRYVAGSMGPTGKLPSSDDPALSDVTFDQLSDIFYEQATALIEGGVDVLLVETSVDILEVKAALDGIRRAKADLNRPDVAVQAQVFLDLSGKMLLGTEVPAIIATLEAMPVDVIGLNCSTGPEHMREAIRYMTRHSRKPISCIPNAGLPIEVNGETVYPMEPEPFARILGEYVHEYGVAVVGGCCGTRPAHIRRLREVVGFVPPKVRDIEYIPSVSSGVRAAALRQEGTLTIIGERVNTLGSRKVKRLLLNEDYDGVLEVAREQVDSGAHLLDVCVAMTERSDEREMMVKLVKKLTMNVELPLVIDTTEADVLEAALAIYPGRAVVNSVSLEGGRGDKIDRTMPLVARYGAATIAMTIDEEGMAHTAERKLAIAQRIAQIAQDEYGVPNEALIFDVLTFPITTGQAELRRAAIETIEGIRLVKQHIPGCFTTLGVSNLSFGVAPHARATLNSVFLKHAVDAGLDTAIINPAHVTPYAEIPPEHIKVCEDLIFDRDDQALARFIQFFEEHAADAKTERADPTEGMTAAQRIHWKIVHRKKEGIEADIDQVIAERIGDMEARAGNGVSNPDRRSHESLVASPFRNAAAVDVLNTVLLPAMKEVGDLFGAGQLILPFVLQSAEVMKRAVAHLEQYLEKLEGVTKGKIVLATVYGDVHDIGKNLVHTILANNGYTVYDLGKQVPINTIIEKAVEVNADAIGLSALLVSTSKQMPLCVQELYRRGLKFPVLVGGAAINKQYGQRILFVDDNTPYEPGVFYCKDAFEGLETVDALADPTTRAAFVERTKAEAAEALGKKQRGRVALAELGRATLSDAAKVRSAVRTDVPVPTPPFWGAKVVRRIKLADVVECLDRNALYRLQWGAKNAKGEEWERLKAEFDAKVRDLVREAERDGWLEPQVVYGYYPCQSDGHEVIVYDPPSTLNGAQPRELTRFVFPRQPERERLCLADYFRSRESGEYDVVALQIVTMGRKVDDLTETLQHAGDYARAYFIHGLGVSLAEALAEYTNRLIRQQLGLKGTQGKRYSWGYPACPDLEEHEKLFRVLPADQIGVSLTEAWQLVPEQSTAAIVIHHPEAKYFSIGSARERAEEDVAETLSI
>NC_009767.1|WP_012122338.1|5073842_5075018_+|class-II-aldolase/adducin-family-protein
MHQDTWTPLIGPRLAPDEHLTFTIAGNAQNAFAPWFAQGLCAALERHGHAFISADASSDDETIESPPARLVLNLCDIDRPRPIHRRGQGTFVVTIVEGEENQRDVMKAAYPLIVRSLANMVIYNTRVNGVLESHFVTIEQGHYTVRLDGDEQDFFDQIYRRIQPLACSHLVINNKFTPDLPDYLWNGDEATRQISWAGRQLDSLGLLPAAIPIQEYLSERELRHVKRLYGIGGLSYGNLSARAPHNPEYFWMSASGVDKSRLDIVGRDILLVTGYDPENLQINLSVPPHIEPRRVSVDAIEHYMIYREHPQVHAIIHIHAWWRDPIPSTQVNYPCGTYELAAEVAELVRQAPDPSRAVIGLKNHGLTITGHSIPEIFARIEGMIVPQVPMS
>NC_009767.1|WP_012122339.1|5075133_5075844_+|SDR-family-oxidoreductase
MLAGKIAIVTGGTGALGGAVVQALLNAGATVWVPYVGTDDLDRLRKRITLPTDAILDGAPLDLTDEAAVYQAYGQVAGTYGGIDILVNIAGGFAGGEPVHRTPWSLWQQQLDINLKTAVISCAAAVPHMLTRGGAIVNVSSRTATQNARNVAAYGAAKRAVLQLTEALAAELRDSNITANAILPSVIDTPANRAADPNADHSRWVAPEAIARVILFLVGPDARIISGAAIPVYGRA
>NC_009767.1|WP_012122340.1|5076138_5076996_-|hypothetical-protein
MTESTATEVQQLITEGRAAALAGDTFTARARFRRATELDSENVDAWIGLSSVAPILAEKREYLRRALAIDPMNAEATASLAYVEKLLADGLQIAPSHRRQERQASGDASPLLSAPEPPAVEVAYCYIHPDRETGLRCVQCNRPICGSCAQMTPVGQLCPECRKARRPPHYQADLSHMLIGGVTGFFAALIGSVLVVVLGGVPFLGLFLAMMAGPLTGALTARIVEQLTRKRGKAMQASTVIGLALGALPLVGFGVIALLNGAFLQLLLIGLWVTLLIVTAVARLR
>NC_009767.1|WP_049768921.1|5077244_5078519_+|hypothetical-protein
MCVLSWIARYGFIIALLAACGSATTNPLTRPDIDEVRPTTAAQPTLTTAPTPTRAPVSGTPQPRFLRTSALQFGVVAHLYYTDRSRVLMLTKIAGFDWVRQQVHWKDIEAAPGVYYWDELDHIVADVSASNLKLLVNIVQSPPFYPPGNGGKPRDPKVMGNFVAAMVERYGDRIAAIEIWNEPNLAVENGGRVTPEDPGRYVEILAECYRRIKAINPNIYVLAAAPASTGVFDPERAIPDIEYLRAMYTYKNGMIRDYFDAQAAHPGGAANSPDWLYPESPGNRPAWNDHPTHYFRHVENVRALMIEHGLGDRQIWITEYGWATPNTTPGFEFGNLMTFDDQADYIVRAITRVYEQYRDEEGRPWVGAMFLWNMNFAVLWGAQGNPNHEQASFSLLNPDWSPRPAFIALQGLHQRLKVSQGRSP
>NC_009767.1|WP_012122342.1|5078460_5081109_-|PAS-domain-containing-protein
MSLAPFLSVLLISGSVAFVLALLFVQQREDNGSVAFALVMIGSAIWSWGYALQIGARSPELALIALRIKYIGILIVPTCWLWFALTYTDSIASLTRKQAAALAFFPVLTFVANITNDWHRFFYRRVNLAPPGALPIVTFDYAPWYWINIVYSYSLVLIGLWLLIRFWGRALRLHRIQIAVLIGALLLMTAISLTFYINEQFVSIVDVTPVLLALNGVLFYLALFRPRHLDARPIAYTHLFEQSSDGVLVFDMRGKVVDCNPAARRMLGLTHPVGQSVQSVLQQYPELAASCTSGVANQPIRIEHSAQVIDAHIAPLRDRRGQQTGSVLVMRDVTNWWRMQQALAESESRLREERRLFIGGPTVVFRWEARERCPVSYVSPNVQEQFGYAPEAFTEGGLMYLSLIHPDDRQRIQNEIADYIRRSVSWYRQEYRFRRADGEYRWIDDSTMVVYNDQNEPIYFLGYILDVTEQKRAEAERLEIERRLQQTQKLESLGLLAGGVAHDFNNLLMAIMGNLDLALLALPKTSTAFQHIRNAMLATRHAAGLTQQLLAYAGRGGDRRTDVDLTRIVAGMADMLRVSVGRQTRLELHLDPYLPVFQADPSQIQQVVLNLILNAADALPAHGGIISVRTGMRFCDEALLAANRTNERLSPGEYLVLEVADTGCGMDEDTQRRMFDPFFTTKAMGTGLGMSAVLGIVRNHHGGIVVDSAPGCGATVTVLFPPSSPVRESEPVKPDVSAAPEPITVLVVDDEADVRDVTARLLTHLNFRVIAVATGAEAIQTLQAHASEVACVLLDANLTDMSGLAVLKALRAIAPHIAIVVSSGYSQHEVLARFAEMAIEGFVQKPYQITELYAAIRRALQRSVMATAPEILSDADATPEVQ
>NC_009767.1|WP_012122343.1|5081312_5082392_-|glycosyltransferase
MELVWHSSFASLTGYSGSSLAFVLGLDARGVAVRPLYLYGADRDEHVMMGRIHPRIAELQRAPVRFDAPQVVYAPGDRFSKNSGRYRIGFTMLEFDRLPQEWVQQANQMDEVWTPTAWGADVFAASGVTRPIFVVPLGVDSGRFEPGEPRAHLTDRTVFLSVFEWGPRKGWDILLRAYRAAFRAGDPVVLVLKIDCRAPGENPVRELATLLPMPSPPVVLLYNRSLDAQRMAELYRSADCFVLPTRGEGWGMPILEAMACGIPAIATDWSGPTAFLSRENGYPLPIRGLVPADAGGAYGIGAQWAEPDADALVDLLRQAVQHPDERRRKGLRAAADANRWTWDRAVERVCARLKETGIW
>NC_009767.1|WP_012122344.1|5082543_5084841_+|hypothetical-protein
MIHLRRWKPGLPLILAAFSVLVALATAYAAQPFVVIDVGAPFDYPHIRGMHAREFTAQTIVVRAVATPGSNEVVIDKPLHNGVFMATLTLDDWKPDGLHPRRLIAVYANDRRINTLDDRGGDRRFRVLIPDDVDLSGGLRLRIEAIPDRTLDVPSVSMVDAEIAKAQTYRWTSERTAITFPALGNGDWRVELQALVAHPDGSPVDARVFANGELIANLPDTPGMRRYQVMAPAHAIDHGDLTLEITANPYRDPRPLGISLERVTVTPLSNALSVALPPWSAFVPALTIVLSAYGALRFSRVPAWGACVTAVAVAILGSWALAAHRYPTGLFLEPLAWFMLFTLALTPLMDRGVTWIFRKLDAPLDPGVRAALLIIFLAGLWVKGGGLLFPYMRAIDIGWHMDRVRWILDGHWAEMYLPGAFSESVMPINEWGPNRPVIPYSPFFHLFSTLFALFPWPLETSANLFSALLDNSRVFLIALLARKAGLSNRVTLFAALIYAVTPVTFLLHSWGNVPTTSGMWWTLVTSTVMIALYPRLHERGPFALLTVLTTVTLLFYTVMAVFHIVFAVFFVGLALIAPVGIDRKPLRPIVLSLGAALIAATLIYYGQYIPPILERTVPYALNLATAGPQSVGVDRPPFSEYMFSFWRHLRYDMRPDGFLYYGLLIPLIFVVPGFLALRKRALLWVMLAAWFSVGTLFMLIGYRVSMVDKQLFYIVPAICLCWGVYAERFWQRGWWGRVLVITIYAFTLATALDLWIIRIARSPVV
>NC_009767.1|WP_012122345.1|5085329_5087090_+|DUF2079-domain-containing-protein
MSRHESLRGSSGKARVLHNLGCDINVAARKPSWIVWQGTSFAHMTQALASQRERSNTWIAHMLTAIERQASLALAAFIMLYVAVLFFGLTFKYFSWAQGYDQIDYQQSIWNTTQGRFLEISHYRHTDHLWGMDFIPAILLIVPFYALFPSALTLNFFQALFMALGALPIYGIARDRFDGSRLAGLGWALVYLLYPSLWFVTMSAPWQPRTLAIPALLGAFFFLQRATFQRAGIREWGAYLGLLALALTTRTDVSLVVVSFGILAALWRVGWRWALPPLMMGLAWFYLSTNVIVPSFYLPDYQVREGEIGAVTEGDYTEVWPGKSPQLAYYSHLGDSAGAILWTIVSRPIDVLRLMFTPDKLVYLALMLLPLALLPLLAPDVAILAAPPLAMNLLSLRPFQITVREQYQALVIPGLILAAIIGAARVWSWWQARSERTRGAHVSGIQERRTRSRPAAMFMIGAIGIAAVTNLAYRNPVATTVLYRESPERLAAMERLAALIPPDAPLGVTSFLAPRMMPRRFIYYVPPDESFPPLERAEYLFIDMRAAALHTERDRDFIQRLRESRRWQVIAEEEDLLVLRQAHQAP
>NC_009767.1|WP_157042871.1|5089464_5091633_+|hypothetical-protein
MFREYTVAGARVRAVAVDLLALTCYLALALLVTWPLALRFNTELFGGIDNIPGRFRFAGYEEAGLHLWRVWWVSEALLHAVHPFWTDLLFYPDGVQLYVQTLSAPNAVITLPIYLLAGPVAAFNTVIVLGFALTGFGIFLLARQYAGGFWGPLLCGVLVTLGPFHLGQLQNSHNHLFSMQWIPFYLHALTLLDERGSRWRIGYASGMAALVVLSDWYWASVCGVLTIVWVIARLALVRERWVLVQRYALFAAGASLMLLPFLAGMIASRTLLPVGHSARDEIWEAYVRYSSADLFGLFFPNVYNPLWGAQVEQILRPIAAPFTPSVWYVAAGWTLTTLAIIGVWSSWQRALHLLIVGVCLWVIALGPTLWIFGYDSNIPMPYALLDRIPLFGAARKPALFVAPVLALLSVLAAIGLEELRQRLPSLWRAAPVVVVAALGTFELWLPAGRVFLPLERPPVYEQIAARPGAVADLPLDVLETSRTLRNQMIHGQPIIGGFIARRPAYPSFDIPLIRAIGTMQELPDDDITPLDRTTLMAMQCFAPVRHVVVRTDLTTQREQNNLEQTLTRLIGRPAVPAYEDAAYRWYELPLFVDACHPFMYPGKGWHAVERNTEMVLYRWADAESQVIIASPHTTSVPALVSLRLAAYQTTRPTELWSDNRLWGVLGISPEPRTFRLLLPVNHGVNPIILRAPTAPDPASNRMISIVAFRVSVAYPALTEEKR

Crispr_ID: NC_009767_94

• CRISPR_ID: NC_009767_94
• CRISPR_location: 5118394-5118500
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cmr5gr11,cas10,cmr6gr7

Consensus repeat of NC_009767_94

Consensus_repeat	Method
GGTGTCATTGCGAGCGCAGCGAAGCAATCTCCTCATC	CRISPRCasFinder

spacers of NC_009767_94

>94.1|5118431|33|NC_009767|CRISPRCasFinder
TGAGATACTCTGCCTGGCAGAGGGTCTCAGCGG

CRISPR arrays and Neighbor proteins around NC_009767_94

CRISPR arrays

The CRISPR arrays of NC_009767_94

>merge|NC_009767|94|5118394-5118500|CRISPRCasFinder
GGTGTCATTGCGAGCGCAGCGAAGCAATCTCCTCATCTGAGATACTCTGCCTGGCAGAGGGTCTCAGCGGGGTGTCATTGCAAGCGCAGCGAAGCAATCTCCTCATC

>NC_009767|94|85|5118394-5118500|CRISPRCasFinder
GGTGTCATTGCGAGCGCAGCGAAGCAATCTCCTCATC	TGAGATACTCTGCCTGGCAGAGGGTCTCAGCGG
GGTGTCATTGCAAGCGCAGCGAAGCAATCTCCTCATC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122381.1|5123519_5124311_+|30S-ribosomal-protein-S2	unknown	unknown	gnl|CDD|235396
NC_009767.1|WP_012122376.1|5120180_5120579_-|hypothetical-protein	cmr5gr11	mkCas0060_cmr5gr11_CAS-III-C	unknown
NC_009767.1|WP_012122379.1|5121259_5121613_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_041331189.1|5116430_5118371_+|alpha-amylase	unknown	unknown	gnl|CDD|200489
NC_009767.1|WP_012122367.1|5110819_5111800_+|ornithine-cyclodeaminase	unknown	unknown	gnl|CDD|236313
NC_009767.1|WP_083760352.1|5119109_5119814_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_012122371.1|5114140_5115010_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122369.1|5112575_5113160_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_049768859.1|5118535_5118958_+|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|379311
NC_009767.1|WP_041331187.1|5108863_5109490_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122370.1|5113402_5114011_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122382.1|5124400_5124931_+|translation-elongation-factor-Ts	unknown	unknown	gnl|CDD|183447
NC_009767.1|WP_049768861.1|5122472_5123132_-|hypothetical-protein	unknown	unknown	gnl|CDD|273859
NC_009767.1|WP_012122372.1|5115251_5116085_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|236216
NC_009767.1|WP_012122366.1|5110020_5110839_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187632
NC_009767.1|WP_012122368.1|5111969_5112473_-|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl|CDD|237999
NC_009767.1|WP_012122378.1|5120889_5121273_-|HEPN-domain-containing-protein	unknown	unknown	gnl|CDD|368314
NC_009767.1|WP_041331194.1|5120608_5120881_-|hypothetical-protein	cas10	cd09701_cas10_CAS-III-C	gnl|CDD|187832
NC_009767.1|WP_012122365.1|5109579_5110011_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_049768860.1|5121749_5122250_-|hypothetical-protein	cmr6gr7	mkCas0142_cmr6gr7_CAS-III-C	gnl|CDD|187857

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012122376.1|5120180_5120579_-|hypothetical-protein	cmr5gr11	mkCas0060_cmr5gr11_CAS-III-C	2.2e-43	142.4	0.5
NC_009767.1|WP_041331194.1|5120608_5120881_-|hypothetical-protein	cas10	cd09701_cas10_CAS-III-C	3e-12	40.1	0.0
NC_009767.1|WP_049768860.1|5121749_5122250_-|hypothetical-protein	cmr6gr7	mkCas0142_cmr6gr7_CAS-III-C	1.9e-37	123.9	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122381.1|5123519_5124311_+|30S-ribosomal-protein-S2	gnl|CDD|235396	PRK05299, rpsB, 30S ribosomal protein S2; Provisional.	1.12849e-153
NC_009767.1|WP_012122379.1|5121259_5121613_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	9.77293e-13
NC_009767.1|WP_041331189.1|5116430_5118371_+|alpha-amylase	gnl|CDD|200489	cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NC_009767.1|WP_012122367.1|5110819_5111800_+|ornithine-cyclodeaminase	gnl|CDD|236313	PRK08618, PRK08618, ornithine cyclodeaminase family protein.	8.40784e-104
NC_009767.1|WP_083760352.1|5119109_5119814_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	6.44602e-07
NC_009767.1|WP_012122382.1|5124400_5124931_+|translation-elongation-factor-Ts	gnl|CDD|183447	PRK12332, tsf, elongation factor Ts; Reviewed.	2.0108e-89
NC_009767.1|WP_049768859.1|5118535_5118958_+|HEAT-repeat-domain-containing-protein	gnl|CDD|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	2.30557e-06
NC_009767.1|WP_041331194.1|5120608_5120881_-|hypothetical-protein	gnl|CDD|187832	cd09701, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, inactivated palm domain and Zn-ribbon; signature gene for type III.	6.40487e-11
NC_009767.1|WP_012122366.1|5110020_5110839_+|SDR-family-oxidoreductase	gnl|CDD|187632	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs. 17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.75443e-74
NC_009767.1|WP_012122368.1|5111969_5112473_-|cyclic-nucleotide-binding-domain-containing-protein	gnl|CDD|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	1.78844e-25
NC_009767.1|WP_049768861.1|5122472_5123132_-|hypothetical-protein	gnl|CDD|273859	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents the region of stongest conservation, the N-terminal half, of one such family, represented by TM1795 from Thermotoga maritima. This protein is the first of a set of six genes, mostly from the RAMP superfamily, that we designated the CRISPR-associated RAMP module.	0.00231335
NC_009767.1|WP_012122372.1|5115251_5116085_-|SDR-family-oxidoreductase	gnl|CDD|236216	PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional.	3.72155e-150
NC_009767.1|WP_012122378.1|5120889_5121273_-|HEPN-domain-containing-protein	gnl|CDD|368314	pfam05168, HEPN, HEPN domain.	1.85957e-27
NC_009767.1|WP_049768860.1|5121749_5122250_-|hypothetical-protein	gnl|CDD|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	0.000205726

Protein sequences

>NC_009767.1|WP_041331189.1|5116430_5118371_+|alpha-amylase
MNFIRDTLSRPRPPSVRRSVQLPRRVTYYPSPVDWRDEVIYFLLVDRFSDGQEETRPLLDRRYLAAARPTLPNGEPWRWDRWAVSGGERFQGGTLRGVVSKLGYLHRLGVTTLWLSPVCKQRGHLNTYHGYAIQDFLDVDPRFGTRQDLVDLVSAAHEQGMRVLLDIVFQHSGPNWRYPPDVPGGAEMPRYTTGRYPFGSWLDATGAPLLGVPDVDDAAWPDEMRNVGYYTRAGAGDLGAGDLNDPAAEHKRSDFFTLRDIDLDAPGALTDMALCYKYWIALTDCDGFRLDTLKHVSFEQARNFCGTIKEFAANLGKTNFFLVGEVAGGDFAATRYLDALERNLNAALDIGEMRLALSDVAKGLAPARAYFDGFVPGLAIMGSHRNLGSRHISILDDHDHVFGAKLRFSTDVMAQHQAAVAAALQLFTLGIPCIYYGTEQALGGPELSERRWLPEWGRADRYLREAMFGPLHPRASERAGLDPQARDGSLPGFGPFGTAGSHCFDERFPVYVRIAALSALRAAYPVLRHGRQYLRPISNFNQPFAFPPAGEIIAWSRILDDEEALCVINPHGVAARGGDVVVDAALNRPGDMLTIILNTAQSADPLGYVGPHPVGQRLPVRERNGASYVEIRNLPPAETLVLTNRP
>NC_009767.1|WP_012122372.1|5115251_5116085_-|SDR-family-oxidoreductase
MSEPFLRSLFGLEGKVAVVTGGSGALGAAMAQGLARAGARIAILARRIEPANAVAAALADAGSDAFALSADVRDRTQIEHACNTILERWERVDILVNAAGGNMPGATLAPDAALRDLDPDAFRTVVDLNLIGTLLPSLIFGAAMIAADRQGVIVNISSMAAQRPLTRIAGYSAAKAAVDNLTRWMAVELTRRYGPGLRVNAIAPGFFIGEQNRSLLLNPDGSPTARGASVIAHTPAGRFGVPDDLIATLIWLCGPGAAFVNGVVVPVDGGFSAWSGV
>NC_009767.1|WP_012122371.1|5114140_5115010_-|hypothetical-protein
MRRIVFLVPLLIITMLTAAMPASASALPFGNDAFRRVWERQDRPVAEQISGRSWTWGPAPNTPAMREPLVEGYEGMRVVQYFDKSRMEINDPTVNPFSPWYVTNGLLPIEMMTGRMQVGYNLFEWRLPARITAIGDPDQFPTYADLLRFYQNPGAVNPNDLNRPATGFINPDGSITGFNDYANDPATMLVLGPNNHGVARAFLDFMNQSGLVYENGRYVVAQVYDPLYVFGLPVTGAYWVKVKVGGVERPILFQVFERRVLTYNPANLPAFRVEMGNVGQHYYWWRYGR
>NC_009767.1|WP_012122370.1|5113402_5114011_-|hypothetical-protein
MPYRRNWIAAALFVGLLIGCGQSVPLSISPTDTPLSSAHATAAVVLTAVAEGSDVRVEPATAAQLPGATVTPEPVVGMLSDTGAPMVANVTAAEQVVRSYFAAFGERRAADAWALLAPAMQANTTFEMFESTTLAVQSLSVTRIESVIAADERLIYGINVEAVPVPGLPTRWNPGPNQLYVVVVPTPEGWRIAAITDEPPSY
>NC_009767.1|WP_012122369.1|5112575_5113160_+|hypothetical-protein
MGKQSRAKRERRAHATYLATVSNCAGTWLERPPDADEQAKIDSAGRILRRFRMQALQLGADQDAFNRFSLEVFRDERFAPLHFSDELIEMILDEIGEPPVVEDDHDPSFTNYLLRALGVVASSRVRRAMAEQARRFLPQYVAAGQYKEALTIEHNCYMTVMSDAATPLLVQMLVSGLARYYEEHEPDEAVMSGE
>NC_009767.1|WP_012122368.1|5111969_5112473_-|cyclic-nucleotide-binding-domain-containing-protein
MSARVIDNLRKVEIFAGLSDEELAQVARLCKALRAPAGQTIFNEGDTGDELYIVHDGTVRVMITTRLSDGTTAPSTINTLYPGQCFGEQALLGGAARTATVSTNEPTVLIVMRALDFDALAEHNPRIGFVVMRNLARDLAYKLNASNLLLRGNIRWRGDELGKRTGG
>NC_009767.1|WP_012122367.1|5110819_5111800_+|ornithine-cyclodeaminase
MRILSADDVRRAVTMPAAIEAVASAFVQLSSGRAVVPLRAHLQQRAHESHTFVMPALLEESGGLGLKVVSVFPHNAARYALPRIHALVTILDAATGRPAAVLEGSYLTALRTGAASGAATRALARQEARVLVIIGAGVQAYHQVEAVCAVRPIERVIIVNRNRERAERLAAALRERAIVANVEMVASAAAAVPQADVICCATSSPTPVFDDVDLRPGTHINGIGSFTPRMVEVPPETVGRAYVVVDQQTAAWAEAGDLQHARNLGLLDESQTVELGAVLNGRSPARTSDEQITFFKSVGNAVQDIAVAQLALREAERLGLGIEARL
>NC_009767.1|WP_012122366.1|5110020_5110839_+|SDR-family-oxidoreductase
MDPVGKVVLVTGASSGIGAATARALVSAGAHVVLTARDAARLNDLARQLKGRARAIPVDVADPIGVERLVAEIIDSYRRIDVVINNAGVGLASPVAQLKPDDLRAALDVNLFGPLSLTQATLPHMRNVGRGQIIFVSSVVGLRALPYAGGYAATKAALDRLSEALRVELHGSGITVTLVRPGTTRTAFNTRRLGVHGDLRRFNPPGIAPECVAETIVRAIRREPRVAYVTWSDRLAVGTALLLPRLADWLLARLFVWRGSDGKGVPYANPER
>NC_009767.1|WP_012122365.1|5109579_5110011_+|hypothetical-protein
MIGALLSRMAFVAANVIVMIILHGNSRQWWPKIPYLSLRDESVGEHTRLLFNTLAVVTVGQALIGRLPRARWLPRALTLGVIPALLPGLIWLGQRGLRLKGSIAERYNLALVPILPIAAVVVEDRLAAALTDADEAVSAPVDR
>NC_009767.1|WP_041331187.1|5108863_5109490_+|hypothetical-protein
MQALLDDRVAPQVLFPPPDTPPAPLPVALDQIAPPRRKRQPIGFRRELQPRRAPDAQTIEQSRGRLEIRELWVVDAGDVGPSLMTAYGWRQVTQIGGLRRWCRRRHADLWTVEEVTVVSSRQRTPAQFLASIRNHWTIENQVHRPRDGSMQEDRLHGRAIGVILAVCRNVVINLIRRHLPGRYIPTARNAITTDLGIALRWMHLPLRN
>NC_009767.1|WP_049768859.1|5118535_5118958_+|HEAT-repeat-domain-containing-protein
MTARVLSKRGANVHLYCPLCFAEIGEDQQDAPCPVCGATPDAWRRRDYTDRLIYALRHPNPEVRMGAIISLGNRREPRAAVPLAECALAHPVDVVQALAIVEAIRNLQASPERDEALNLLASHPARVVRRAVAGKGERQG
>NC_009767.1|WP_083760352.1|5119109_5119814_-|nucleotidyltransferase-domain-containing-protein
MAQALGDSLVALALFGSRARGDAFPDSDWDLLLIAEHLPASPLARHECLTACLPAEWRGRAAIIARTPSEFTAHLASLYLDIAIDGVMLYDRDGAVTRCLAALRSMLDRLGLYRIRRDRDLVWEWRTFPGYGWRLGWQQAREESERMNQSAVYRLKLAGGFIAEARQDIERLATIADILGMEVHIKTDDGAEEQNLTPWDLFDEAQEREALTLAEEALAIAQRLVQRLTTEGCE
>NC_009767.1|WP_012122376.1|5120180_5120579_-|hypothetical-protein
MASQGATNLDYLAANRAQEIIKRASAKASARDVDTAVTKALGVLQENGVYACFLYLLAKEKDIGKIVVEEMLNVLQNPRRNKPSSLTPDVVLRHISENVTHDLERLLLAKEVLEQTLIYARYGAKARDASES
>NC_009767.1|WP_041331194.1|5120608_5120881_-|hypothetical-protein
MYQLDILAQHCNELLLVEVACWVHDWQKCIDMKPASDWGKGSKADQKKIQQWRQKDSSLKPGDFAFCLQNLMFNLCASMETDRDGFSRIS
>NC_009767.1|WP_012122378.1|5120889_5121273_-|HEPN-domain-containing-protein
MSDPEQWLAFARQDAQIADLAMREGIFNQVCFHSQQCVEKSLKALIVHQGQTPPRIHKLTDLLALVSAVPLSAMASEIYLLDRFYTVTRYPGFSPLTSQTLPDQHDAEEALDIARKVLDIVTNIVTS
>NC_009767.1|WP_012122379.1|5121259_5121613_-|nucleotidyltransferase-domain-containing-protein
MSTTAVTPSLDRRALLEAELARFVQILREQYQPERIILFGSLAEGETHEWSDIDLVIIKQTDKRYLDRIREVLLLLQPRVGIDVIVYTPDEFATLRQTNMMVREEIASKGRVIYERS
>NC_009767.1|WP_049768860.1|5121749_5122250_-|hypothetical-protein
MRGYDAPDQETQDRQMVRLFGNVRGEEATFAAGRLYFFPTFFDRLGLEVINPHDRVKGVGERGPILFECAPTRAQGTFTLLDVPLGVQVDGVEIAEDLAAVASGIHRMLVEDGFGAKTSSGFGTAEETLPDAGQLAIAADPLQSPQQKTFRSLTKLVEQAAAQDAR
>NC_009767.1|WP_049768861.1|5122472_5123132_-|hypothetical-protein
MRGLGGTACDPSKGECRFEREKFGTSTATDDHQRLRDAGLCDVCQLFGATGWRRRFRIAVAKDQTVPLWQGDQPLNICPPGRNRGWFLPPGRMGEFTLRLDGDGESIARMLALLRFVERSGSLGAKPQLGYGAVEIQNWNEIEMPPKELWREEAQRLARNGHGRDRNLPNLCNSGFFRYRFRPDSAAWWSQIDGLERVVTQVRSFATQYCSEPEPECQR
>NC_009767.1|WP_012122381.1|5123519_5124311_+|30S-ribosomal-protein-S2
MTQGAQRLVSMRALLESGAHFGHQTKRWNPKMRPYIFTARNGIHIIDLQKTITGLTEAYQFIVETVAAGNKVLFVGTKKQAQETIAEEATRADQLYVIQRWLGGTLTNFVTIRKRLRYLINLEEQRARGEFNKLTKAEALKRDAEIEKLNKIFGGIKTMDRLPGALFIVDPHKEDLAVKEANKVGIPIVAMVDTNCDPDLIDYVIPCNDDAIRSIRLIAAKIADAAIEGRNRRESLQADVAYSQSHDHAMAERMIAEEAEAVE
>NC_009767.1|WP_012122382.1|5124400_5124931_+|translation-elongation-factor-Ts
MAEITAQMVKELRERTGAGVKECKDILEQTNGDFEKAIEELRKRGLRVSDKVAGREAKEGRIEVYIHHGARVAAMVELNCETDFVARTDDFIQLARDIAMQVAAMNPRYVRVEDVPESEIVASGMSPEQFYREHVLLKQVFIKDSSQTIEEKVQAAIAKIRENIVVRRFVRYEIGG

Crispr_ID: NC_009767_95

• CRISPR_ID: NC_009767_95
• CRISPR_location: 5260396-5260499
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_95

Consensus_repeat	Method
CCTGCCCCGCTCCTGCACGCGGGAGCGGGGAGTCCGA	CRISPRCasFinder

spacers of NC_009767_95

>95.1|5260433|30|NC_009767|CRISPRCasFinder
TCTGCGCGCGGCTGTAACGAGTTTATACAA

CRISPR arrays and Neighbor proteins around NC_009767_95

CRISPR arrays

The CRISPR arrays of NC_009767_95

>merge|NC_009767|95|5260396-5260499|CRISPRCasFinder
CCTGCCCCGCTCCTGCACGCGGGAGCGGGGAGTCCGATCTGCGCGCGGCTGTAACGAGTTTATACAACCTGCCCCGCTCCTGCACGCGGGAGCGGGGAGACCGA

>NC_009767|95|86|5260396-5260499|CRISPRCasFinder
CCTGCCCCGCTCCTGCACGCGGGAGCGGGGAGTCCGA	TCTGCGCGCGGCTGTAACGAGTTTATACAA
CCTGCCCCGCTCCTGCACGCGGGAGCGGGGAGACCGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122501.1|5250348_5252997_+|hypothetical-protein	unknown	unknown	gnl|CDD|199212
NC_009767.1|WP_157042875.1|5262287_5263751_+|MATE-family-efflux-transporter	unknown	unknown	gnl|CDD|240542
NC_009767.1|WP_083760354.1|5253454_5253904_+|hypothetical-protein	unknown	unknown	gnl|CDD|368559
NC_009767.1|WP_012122505.1|5255527_5255938_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122504.1|5254695_5255523_+|cyclase-family-protein	unknown	unknown	gnl|CDD|224790
NC_009767.1|WP_012122498.1|5245819_5246725_+|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|200561
NC_009767.1|WP_012122514.1|5270726_5271341_+|XTP/dITP-diphosphatase	unknown	unknown	gnl|CDD|184835
NC_009767.1|WP_012122499.1|5246737_5249644_+|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|376899
NC_009767.1|WP_012122510.1|5266467_5266797_+|ATP-dependent-Clp-protease-adaptor-ClpS	unknown	unknown	gnl|CDD|376861
NC_009767.1|WP_012122506.1|5256430_5260009_+|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl|CDD|131231
NC_009767.1|WP_157042874.1|5260698_5261997_+|MFS-transporter	unknown	unknown	gnl|CDD|340886
NC_009767.1|WP_012122511.1|5266802_5267873_-|SPFH-domain-containing-protein	unknown	unknown	gnl|CDD|259806
NC_009767.1|WP_012122515.1|5271337_5272999_+|DUF2357-domain-containing-protein	unknown	unknown	gnl|CDD|367929
NC_009767.1|WP_083760380.1|5253825_5254077_+|hypothetical-protein	unknown	unknown	gnl|CDD|368559
NC_009767.1|WP_012122509.1|5265332_5266073_+|hypothetical-protein	unknown	unknown	gnl|CDD|239109
NC_009767.1|WP_012122513.1|5269612_5270596_-|decaprenyl-phosphate-phosphoribosyltransferase	unknown	unknown	gnl|CDD|237058
NC_009767.1|WP_012122512.1|5268170_5268980_-|isopentenyl-phosphate-kinase-family-protein	unknown	unknown	gnl|CDD|239774
NC_009767.1|WP_012122516.1|5273054_5275148_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|223288
NC_009767.1|WP_012122500.1|5249729_5250293_+|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NC_009767.1|WP_012122503.1|5253998_5254508_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122501.1|5250348_5252997_+|hypothetical-protein	gnl|CDD|199212	cd10914, Peptidase_C25_N_1, uncharacterized subgroup of the Peptidase C25 family N-terminal domain. Domains in this subgroup are uncharacterized members of the Peptidase family C25 N-terminal domain family. Peptidase family C25 is a unique class of cysteine proteases, exemplified by gingipain, which is produced by Porphyromonas gingivalis. P. gingivalis is one of the primary gram-negative pathogens that causes periodontitis, a disease that is also associated with other diseases such as diabetes and cardiovascular disease. Gingipains are a group of extracellular Arg- and Lys-specific proteinases called Arg-gingipain (Rgp) and Lys-gingipain (Kgp); RgpA and RgpB are homologous Arg-specific gingipains encoded by two closely related genes, rgpA and rgpB, while Lys-specific gingipain is encoded by the single kgp gene (also called prtK, prkP). Mutant studies have shown that, among the large quantities of proteolytic enzymes produced by P. gingivalis, these three proteases are major virulence factors of this bacterium. All three genes encode an N-terminal pre-pro fragment, followed by the protease domain; however, rgpA and kgp also encode additional C-terminal HA (hemaglutinin/adhesion) subunits which consist of several sequence-related adhesion domains. Although unique, their cysteine protease active site residues (His and Cys) forming the catalytic dyad are well-conserved, cleaving the C-terminal peptide bond with Arg or Lys residues. Gingipains are evolutionarily related to other highly specific proteases including caspases, clostripain, legumains, and separase. Gingipains function by dysregulating host defense and inflammatory responses, and degrading host proteins, e.g. tissue, cells, matrix, plasma and immunological proteins. They are proposed to enhance gingival crevicular fluid (GCF) production through activation of the kallikrein/kinin pathways, thus increasing vascular permeability and causing gingival inflammation, a distinctive feature of periodontitis. RgpA and RgpB are also able to cleave and activate coagulation factors IX and X in order to activate prothrombin to produce thrombin, which in turn increases production of GCF. The gingipains also play a pivotal role in the survival of P. gingivalis in the host by attacking the host defense system through cleavage of several immunological molecules, while at the same time evading the host-immune response by dysregulating the cytokine network.	1.30821e-112
NC_009767.1|WP_157042875.1|5262287_5263751_+|MATE-family-efflux-transporter	gnl|CDD|240542	cd13137, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Thermotoga marina NorM. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	1.54376e-122
NC_009767.1|WP_083760354.1|5253454_5253904_+|hypothetical-protein	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	6.09508e-10
NC_009767.1|WP_012122504.1|5254695_5255523_+|cyclase-family-protein	gnl|CDD|224790	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism].	1.72866e-67
NC_009767.1|WP_012122498.1|5245819_5246725_+|polysaccharide-deacetylase-family-protein	gnl|CDD|200561	cd10935, CE4_WalW, Putative catalytic domain of lipopolysaccharide biosynthesis protein WalW and its bacterial homologs. This family corresponds to a group of uncharacterized lipopolysaccharide biosynthesis protein WalW found in bacteria. Although their biochemical properties remain to be determined, members of this family is composed of a seven-stranded barrel with detectable sequence similarity to the six-stranded barrel rhizobial NodB-like proteins, which remove N-linked or O-linked acetyl groups from cell wall polysaccharides and belong to the larger carbohydrate esterase 4 (CE4) superfamily.	1.9948e-10
NC_009767.1|WP_012122512.1|5268170_5268980_-|isopentenyl-phosphate-kinase-family-protein	gnl|CDD|239774	cd04241, AAK_FomA-like, AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).	1.85977e-71
NC_009767.1|WP_012122499.1|5246737_5249644_+|FtsX-like-permease-family-protein	gnl|CDD|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	1.12287e-07
NC_009767.1|WP_012122510.1|5266467_5266797_+|ATP-dependent-Clp-protease-adaptor-ClpS	gnl|CDD|376861	pfam02617, ClpS, ATP-dependent Clp protease adaptor protein ClpS. In the bacterial cytosol, ATP-dependent protein degradation is performed by several different chaperone-protease pairs, including ClpAP. ClpS directly influences the ClpAP machine by binding to the N-terminal domain of the chaperone ClpA. The degradation of ClpAP substrates, both SsrA-tagged proteins and ClpA itself, is specifically inhibited by ClpS. ClpS modifies ClpA substrate specificity, potentially redirecting degradation by ClpAP toward aggregated proteins.	1.22191e-27
NC_009767.1|WP_012122506.1|5256430_5260009_+|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl|CDD|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NC_009767.1|WP_157042874.1|5260698_5261997_+|MFS-transporter	gnl|CDD|340886	cd17328, MFS_spinster_like, Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters. The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.70886e-57
NC_009767.1|WP_012122511.1|5266802_5267873_-|SPFH-domain-containing-protein	gnl|CDD|259806	cd03408, SPFH_like_u1, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease and, in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	6.70474e-84
NC_009767.1|WP_012122515.1|5271337_5272999_+|DUF2357-domain-containing-protein	gnl|CDD|367929	pfam04411, PDDEXK_7, PD-(D/E)XK nuclease superfamily. This domain has been identified as a member of the PD-(D/E)XK nuclease superfamily through transitive meta profile searches. The domain has two additional beta-strands inserted to the core fold after the first core alpha-helix. It has been speculated that it could function as s methylation-dependent restriction. The domain has two additional beta-strands inserted into the core fold after the first core alpha-helix. The PD-(D/E)XK signature is clearly conserved corresponding to an invariant PD (motif II) and DAK (motif III) motifs. There is also a conserved glutamic acid in motif I that is most likely to be involved in metal ion binding. The second core alpha-helix contains an invariant MHXYRD motif. It has been speculated that it could function as s methylation-dependent restriction enzyme.	3.81828e-29
NC_009767.1|WP_012122509.1|5265332_5266073_+|hypothetical-protein	gnl|CDD|239109	cd02549, Peptidase_C39A, A sub-family of peptidase family C39. Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage is mediated by the transporter as part of the secretion process. Bacteriocins are antibiotic proteins secreted by some species of bacteria that inhibit the growth of other bacterial species. The bacteriocin is synthesized as a precursor with an N-terminal leader peptide, and processing involves removal of the leader peptide by cleavage at a Gly-Gly bond, followed by translocation of the mature bacteriocin across the cytoplasmic membrane. Most endopeptidases of family C39 are N-terminal domains in larger proteins (ABC transporters) that serve both functions. The proposed protease active site is conserved in this sub-family of proteins with a single peptidase domain, which are lacking the nucleotide-binding transporter signature or have different domain architectures.	2.42171e-06
NC_009767.1|WP_012122514.1|5270726_5271341_+|XTP/dITP-diphosphatase	gnl|CDD|184835	PRK14822, PRK14822, XTP/dITP diphosphatase.	4.36954e-94
NC_009767.1|WP_012122513.1|5269612_5270596_-|decaprenyl-phosphate-phosphoribosyltransferase	gnl|CDD|237058	PRK12324, PRK12324, decaprenyl-phosphate phosphoribosyltransferase.	8.1407e-111
NC_009767.1|WP_083760380.1|5253825_5254077_+|hypothetical-protein	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	3.43624e-10
NC_009767.1|WP_012122516.1|5273054_5275148_-|AAA-family-ATPase	gnl|CDD|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	1.12889e-18
NC_009767.1|WP_012122500.1|5249729_5250293_+|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	1.17568e-10

Protein sequences

>NC_009767.1|WP_012122506.1|5256430_5260009_+|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MKRSWVTLEGNEAAASIAYRLSEVIAIYPITPSTPMGELADAWAAAGKPNLWGTTPLVIEMQSEGGAAGACHGALQRGALTTTFTASQGLLLMIPNMYKIAGELTPTVFHIAARSIAAHALSIFGDHQDVMAVRQTGWALLASSSVQEAHDLALVAHAATLRARVPFLHFFDGFRTSHEINKIEQLTDDDLHAMIDPSLIEAHRLRALSPDRPVIRGTAQNPDVYFQARETVNPFYAATPGIVQETMEKFTQLTGRAYHLFDYTGASDAERVIVIMGSGAETARETAKFLAERGEKVGVVTVRLYRPFSVAHFVAALPTTVQRIAVLDRTKEPGSSGEPLYLDVVTAMAESGRHLPVIGGRYGLSSKEFTPAMAKAVFDELAKDQPKNHFTVGIVDDVGYTSLDYDPSFSIESPRTVRCLFYGLGADGTVGANKNSIKIIGEETNNYAQGYFVYDSKKSGSMTVSHLRFGPEPIHAPYLVDRANFVACHQFSFLERIDVLKAAEPGAVFLLNSMYGPDEVWYHLPREVQDDIVRKQLKFYVIDGDRVAKESGMGRRVNTVMQTAFFAISGVLPREDAIAEIKRSIKKTYGKRGEAVVQQNYRAVDAALARLYEVDVEKFAGFRSPKTRRPPVPDHAPDFVKEVLGPMIAYEGDSLPVSKLPVDGTFPTGTAAWEKRTIALEVPIWEPDICIQCGKCAYVCPHAVIRTKVYEPALLEGAPETFLSSEARFKEFPGYKYTLAISPEDCTGCGLCVEVCPAKDKRQVGRKAINMKPLVEVREREVRNWEFFLTIPDIPRTAMHPGSIKNSQLLLPLFEFSGACAGCGETPYIKLLTQLFGDRLLIANATGCSSIYGGNLPTTPYTKNAEGRGPAWSNSLFEDNAEFGLGMRLALDQQIAHVRELLPLFAPVVGQDLVDALLNADQSTEAGIAAQRERVELLKQRLHTLDRSQFPDVVEREHELLSLADVLVRKSVWIVGGDGWAYDIGYGGLDHVLASGYNVNVLVLDTEVYSNTGGQASKATPIGAVAKFAAKGKSAPKKDLGLIAMAYGNIYVARVAMGADDVQTLRAFMEAEAYEGPSLIIAYSHCIAHGIDMRKGLEQQKLAVQTGYWPLYRYNPMLAAEGKNPLIIDSKDPTLPLEKFVYNETRYRMLMQSDPHRAEDLLHKAEASVRARWQHYKELATLSEVKAEHDGH
>NC_009767.1|WP_012122505.1|5255527_5255938_-|hypothetical-protein
MERYEQGLISPGQIDSLLKLRLVLLFAEYPWLRMSSATAQQRLRESPWAIAEALDELAHAGLLSKTEYGGQPMYRLTATPEHRLRLERLARSFDDPQRRDELYDLVRTASEERRYREIVMPHTGALTASEFDAFVV
>NC_009767.1|WP_012122504.1|5254695_5255523_+|cyclase-family-protein
MCPPETLASMRSPEISRRNLLKFGLGAAAAAALPIGSAQAATVRRTTFRNVLDLTHVLGTQFPLFPGAAPFRIQQAVSHDKDGYYGSILTYWEHSGTHMDAPVHFAPNGLFVDQLPVENLVVPAVVINITEKVRRDPDSVVTPDDIRAWERRYGRIPDNAAVLMASGWGARAGSVEAFRNTDGSGVMHFPGFGKEAIDFLLTERRISGIGVDTLSLDHGPSTTFAVHYTILPTNRWGLENLANLEAIPPSGATLFVGAPKIAAGSGGPTRVMAVW
>NC_009767.1|WP_012122503.1|5253998_5254508_-|hypothetical-protein
MMAEKDRRYLLAAGMAVSVLMCLMLAVAIQSARSPEIRTHKDAIAYALRQQGVSYREITFSQTWEESVNLRVFNAAVQVRLADGRTFHGWIGCEQGDRVCFLVLRGAGINGARLPDIHYRRRPAWQRWIDQVIAWFSEQWTSSGYSSKMPATGNCHPGTTSSPFSVSFS
>NC_009767.1|WP_083760380.1|5253825_5254077_+|hypothetical-protein
MLARCADLVVEVVSPHDLYADVDEKVTDWLDTGTRLVVVVNPRRRTVTGYQASVYTILHENDTLNGDEVVPGWQLPVAGIFEE
>NC_009767.1|WP_083760354.1|5253454_5253904_+|hypothetical-protein
MCRAVLYFVRRFWQLPAREEQGLAISVTRRLVTADELLRIPTDGFRYELLLGELRRVSPAGYQHGRLVMNVATLLDQFVRTHRLGTVCAAKTGFLLHENPDTARAADVAFIRRERTLDARDVTGYWPGAPISWWRWCHHTTSMPTWMKR
>NC_009767.1|WP_012122501.1|5250348_5252997_+|hypothetical-protein
MMTRFALVLALVIGSVCGAAASAAAGAIAVVRGGDETLVVQATTSGTRIIWRPPASDPSLHVEPVLVALRLTGDATIAPRLLALDDTPWTGDFDDPPGAPVFVLREARQRGERLAVLALSPVYLREGQARAVRTLEALVEGAAPLSDSPVPVAASSLAAGEPASGRPPAFPAPPALRVRVDRAGVQVIPVSSLSSAIAGAPERLKLTRAGVEIPLELRDASGNGVWGDPDDELRFYAPPPGNRWNRSDTYWITLEAGSRLRIASRAVSAPSGEAPSTALERGVVRGTAYYDSRRPGSDGDHWFAKLLRAEAGQPADDQAMLSVPLTTTLPTATGTVTLTVAVHAQSDGARRLTAAIESSSGSPVEWSGSGDALLTLSVAGSPAATTQVRLTLTAVVGYAQVAVDTVEWMRPVQLQFGGKGAVFQGAPDQRAYWLTGAPSGFDLYDITDPVMPTRLQMPAGSAFEDSAPGKLYLLTGVGTRHTPTVEPFTPPTLPTDASVLYIAPAPFHAALTPLVDLRRAQGYSVAVVDVQHLYDGWSDGQVDPDAIRAFLQFARPQAVTLVGDGSSDPFDYTDRGAKNVNLIPPYLAMVDPWLGETACETCYAQLDGERPTDDRLPDVWLGRLPAKSVAEVQLLVAKIIRYETSPSGGAWRSRALYLADDADTSGDFVAQAEASIALHPVGVQIGRVFFGNGAGAFPTAAAARTATRTQFDNGAAAVVYIGHAHQQQWAVTELSAPENWLLHRNDVAALTNGERLPVVLALTCLSSAFQWPSYVGMTVDEALLLHEKGGAVAVWGPTGLGVSYGHDKLQRGFFRALWSPAPDVGIERAVPLGALTSAGFRDLFTGSACCQETIFTYALLGDPLTPLRMTAGTRVMLPLVQR
>NC_009767.1|WP_012122500.1|5249729_5250293_+|hypothetical-protein
MPRLVIAICAGMVAAGLLAGFARVMEAAAPRGVPQAPVLALTETVEARPTDTPLPTDTPLPTETPPPTTPPTTPPPTTPPTTPPPTTPPETPPPTTPPTTPPPTTPPETPPPTTPPETPVQEQQQTATPTEMVVSTATPTLTPTPTAPVPATLPTTGAPAAGGAPLIVLLLALMAMVGGLLARRRTA
>NC_009767.1|WP_012122499.1|5246737_5249644_+|FtsX-like-permease-family-protein
MIRQLTLALAFPSVIWRRLLSHLGLALAVWSGMTLAVGMVVCIPVYAEASGYRILLAALTERAIADPLPPFAMVYRYGGASDPSISWQQYLLADQLAGHLPAAGIDLPAPPSVRFAATEKLRVGFPDGAGREVLFARIGFLSGVERHIQIVDGDLPRPFTGDGLLDVLVSETTASKNTLLVDDVYLVQSTGRGARIEAPVRIAGIWRPADADASYWFQPPSTYSDVFLVPEESFVRLVDVPDARFVTLTAWYTAIDGSSVRSSDVERLRERIAMATADIQQRLPGAELVRSPMDALERHRDQVRVLTVTLALFAVPLLVVIGYFAVQVTEMTVARQQQEMAVLRSRGSSRWQVLGLALGEVLLLGAAAWVAGLPLGWLLAQLIAWTVSFLRFAPLDIPPPTLLPASPWHALATILLALPAVLLPALSAAGRTIISYKSERARATRPPLWQRLYLDILLLIPAVYGYQQLRLSGMIGVPGVTVGADDPFRNPLLLLAPALMVFAGTLVGMRFLPLLLRLLAWSAGRAPGVALVTALRFLSRTPGTYGGPVLLVALTLALATFTSSMALTLDRHSEERAYYRGAADVRLAYPGAAITSANIAGDREIAPAETSLDLSGGTLGTTGEADTTPSTAYMFVPMEEYLTIPGVTGATRVAPSKADIIVGNTPATGGIFYGVDRTTLAAVLADAWRPDYAGESLGALMNRLADYPDAALVSETFARERGLRIGDRFALAMNDRGQTQNITFTVVGTLKYFPTLYDQGLPFVIGNLDYSFDSQGGQYPYEVWLSLAPGANLQSVAAAGIGYGLRMIRSTPQTLLELDLRRPERQGLFGLLSVGFLATTVVTVIGFVAYTLLSFQRRLVELGVLRAIGLSTRQLSALLVFEQTLVVGFGALLGTAVGILTSRLFIPFLQVRTGVYPDTPPFVVQIDWERIVLVYGISGGLLAATIVAIVLLLRRMRIFEAVKLGEAV
>NC_009767.1|WP_012122498.1|5245819_5246725_+|polysaccharide-deacetylase-family-protein
MTTRLTIHVLFTLDCESIAIRTAKEGPRTWEQSARAIEGYANRLLRAGYPPTLFLAPQCAVEHTPLLEELAERGAELGLYVNPLQAESGSYRNFLGTLSPEAQRRLIDESAERFADAIGVRPRSFRPCKHSASDDTYRLLYELGFRQGSIAQPGFVLPRIGVDWEHVSHHPRYVDSANRERSGELPLLDVPVTTDPDQRHITNLPYELRIDAGTFEALHQPVIDRAIERMIEDAASFCALCFTSDNRPAYDNDDDKHSRTLEAILDYLEALRERYDLVPTTLAGAHDRFRAARHTLRAAQE
>NC_009767.1|WP_157042874.1|5260698_5261997_+|MFS-transporter
MMHTPRSGYRWFVIAVFFCFMLLHQADKLLIGPLTPAIMDEFGITMTQMGAVTTGALVVASILYPIWGYLYDRFARARLLALASFIWGATTWLSAIARTYPTFLAARASTGIDDSSYPGMYALVADYFGPNLRGKVYGLLQLAQPIGYLIGMVLALMLAPQIGWRTIFFFTGGLGIVVALVILLGVREMPRGKAEPEFEGMTEMARFRFSWAEMRAVLGKRTMWFVFLQGFAGVFPWNVITYWFFTYLARERGYDESSILLTVAPVILILASGSFIGGVLGDWAFKRTTRGRIIVSSIGVLMGAIFLYLAMQTPVEARTTFFVLMCLTALFMPLSSPNVIATVYDVTVPEVRSTAQAVEYFIENSGAALAPLLAGIIADMYNLQTAITWICVTAWALCFMFYLGALRYIERDHHALRDEMGRRAASFRQTMA
>NC_009767.1|WP_157042875.1|5262287_5263751_+|MATE-family-efflux-transporter
MEKCVTIPDIVPSTAETIAPAAPSTEARNETIDRPSLRRRVMGLALPAIGENLLHTALGIADTILVAGIGVVALAGVGAALNVLFIVMAALSSLSVGASVLVAQAIGANNGARASHVAGQALIWGIALSLPITLVGLIFAEPVVAWYGMAPDATAVAAEYLTISAAGIPVLALMLIGGSVLRGAGDSRTPMVITALANVLNLVASWVLIYGHLGMPALGVAGSAWGTLIARVAGAALFLAILLRISPRLRVGGAGTWRLRWGTAREVLWLGAPAALEEIIIITSFAALTPIVVGLGTVALAAHRVALNVLSLSFMPGIGFSLATTALVGQAVGAGRSDEARAVTNVAMRWAILWMGGLGASFILFAPHMVGIFSNDPQLVAIGAAAVQVVALAQPLWAGTFVIGGALRGIGDTRTPMIISGVLGWAAVGIAFLLVYVWPALWAVWLAYIFTGPPEIGALWRVWRRKVRTVVVEAEGERQEVRGSTEA
>NC_009767.1|WP_012122509.1|5265332_5266073_+|hypothetical-protein
MSSFPPYVRSVVATADPAAWPVVGQGFNECSFTSLANALNLLHGEPRFTKDEFIREAGLFFQPALGGTLPPLKALQLRRRGYGAHFGNLSHTNAERVLRGLIDRGAPVIVDMYPALQIGRLRLWGQHATVLVGYSLPYRDASGALREEYYLVDAQWPELRRFDLTTNDIDRDGDGIPECYPGNRTLERYEFLRLWSSRNYCPVFRTPAEHDAWYRETMRRAAGLPLVGWVGQGLLFGSDDRLKDEA
>NC_009767.1|WP_012122510.1|5266467_5266797_+|ATP-dependent-Clp-protease-adaptor-ClpS
MSAEVSVPLTTTIPTTEYVVVTEEELERPYRVIIENDDVTPMDFVVLVLLTIFELGFEQSVAIMLEAHHNGRAHVVTLPYEEAQRRVYEAHHAAREAGYPLSFYLEPDA
>NC_009767.1|WP_012122511.1|5266802_5267873_-|SPFH-domain-containing-protein
MPLLDIVEFVDPTGKTLVARVPPDGNGELRLGSQCIVREGQLAFFARDGRFLDMLIPGRHTLTSNNIPLLIDFIKLPFGSKSPFRADVYFVSLHQHTDLKWGTPQPIPMRDAQFGMVRLRAFGTFIIQVAEPRRLLTAVVGTRGRLTVQDVEEQLRSSIIARVADVIAERMRERQLSVLDLATEYDELSEMAHEVLKDDFAALGLQLTRFYINTISVPEELERRLDQVGGVAAFGGLGDYTRFKAAEALHDAARTGGDSTVGAGIGLGAGMNLGALMGQVLQQQTPTQSPPQPAPITATSSQAATKTCPRCNTAMPANARFCSECGASLLPATCPQCGHAVTTGAKFCIECGAALK
>NC_009767.1|WP_012122512.1|5268170_5268980_-|isopentenyl-phosphate-kinase-family-protein
MITFIKWGGSVITDKTQQERADAGTIRRLAGELRQALDAAPDMRIIVGHGSGSFGHVYAQRYGIHRGLAPNADWMGFALTSAAALRLNRIVVDELLAAGVPALALQPSTTLAARGGQLTRWNTDALERALHHRLVPVIHGDVAFDDIQGSAIISTEQLLAHLAALPALQPTRIVLVGESGVYTADPRNNPNAERIARIDHHNVADVLAGTGASHGVDVTGGMRSKVELMWRLVQAIPSLQVYFIGPTPGLLHRALLGDATVEGTVMVAG
>NC_009767.1|WP_012122513.1|5269612_5270596_-|decaprenyl-phosphate-phosphoribosyltransferase
MEQIAEIELTRARGGAMLIELLRAMRPKEWIKNTFVFAAIVFSQQRLWMHVDAVLTVTLAFALFCMVASAIYLLNDLVDMEKDRAHPKKRNRPLASGRLSPRIAALTAVALVVVALPLSVALDLSYAPPGDSTTWFGYNYDFPAALFTYAIIQGVAYSYYFKHVVIMDIFTIAAGFVLRAVAGAMVIDIAITPWLLICMGLLALFLGLAKRRAELVLLENGAGAHRRILDEYSLPLLDQMMSIVTAATIIAYTLFTSTAETLPHEPFPVMMITVPFVVYAIFRYLYLIYKQDGGGSPADLVLRDMPLASCIVLWGLTSVAILAAFAS
>NC_009767.1|WP_012122514.1|5270726_5271341_+|XTP/dITP-diphosphatase
MPRLLIATTNPGKLREYAAIFADLPLDLCTLADLGIQDDVEETGATFAENARIKAEYYAQRSGLPTLADDSGLEVAALGGEPGVRSARYAGPEATDAERNAFLLRKLEHVPFHARLARFVCVIALALPGGPIEFVEGVLPGVIEFEPKGHYGFGYDPIFYVLDEDATLAELPPERKNQISHRANAARAARDVLRRWLDEGWPGP
>NC_009767.1|WP_012122515.1|5271337_5272999_+|DUF2357-domain-containing-protein
MTFSLDIELSLAEDSALPVVTEQQPVEFVCLPPGEAALVLTVDGMALTPFLRPGDARWRWVWNPGASVGTHTLRLTVHINGEAFGEWQWRLSVAPRKIDSERYVAILEDVERVAPPLVRSLAGAARDARLAGRSDLPRLWFDDATVLFGSSFEPFEQTVRRILAHPRSLLRREEEHVPLGQARELSVAAVQRAVQGDVEAAPSDAAPQVQRLLRPEGGALPRTIVQDLSRDTHDTAEHRLLKRTLELLRGRARRCADRAQREVARLDAAAPASSRAARARAIAARCDQCAQRIAGLLGAPFFEQVTALRHAPAVTPLIRRDPAYRQVYRMWRALHQGVVVDPGAPFDLPVVDLPLLYERWCVLQVVQALLNLGIEAHSCSLLLPPSDDADAWSFNFRRDEPLLVATWSGWTLRLRYQPWYRPAPGSRNDETLVSLDCHTRIPDIAIEMVRPDHPPGVIVLDAKYRLDADGRGVPADALAEAYAYAGAIGVAGAPAVAAAFILYPGTGVAERYPGGAGAIPLLPGAVGTLEGVLAREMILKCGTFQEQRVFATS
>NC_009767.1|WP_012122516.1|5273054_5275148_-|AAA-family-ATPase
MARFELSFTPTFYYESLDLPRHVSKTITRKLETIADDPYSARGDAKKLKGYDNVYRVRVGDYRICYCIGKGWVKLLSVRKRDERTYEDDLPDIAPPALPPDPVTLTPRAHGAVEEQFVLSKPPMDAALLSSALPPSRPLPFPITEDMLERWRIPAQYRTITLTARTEDDLLNLPIPERHLTLLLDNLFPRSLDAIAAQPEFVLSTPVDIERFAEEDLTGFLLRLTPDQERLVNQDRRGPILVRGGPGTGKSTLALYRVQRLLEQGVTSVLFTTYTNALVAYSEQLLTRLLGASPDTRGVKVTTVDSLAFHYFARGWGSPRLATEGQATALLMDALANADIPAADAHERRAALERLGAEYLLQEFLHVIEARNINSLEEYLAVERHGRRMPLKPALREALWAIYVSWRDLMRVKGLVLNEQVRRGAMEFAATLSPKPYQALVIDEAQDLSPAALRFLLNLVETPEHVYLTADASQSIYQCGFSWKQVHRTLAMAGRTILLKQNFRNTAQILAACAGILAGSSAGEEESVRQIPSAHHGDPPLLRLVNNDSDESEAIRDFFLEAARRYRLPTHSGAVLCTSRRAGEDIALRLTRLGMPAAFQSSKDVDITTPKVKVLTLHSAKGLEFPFVAVVGLDEGRFPRISADLPVEEAQMQEDEQRRLFFVGCSRAMRALLVCGSQATPSPFLTPLQPPVWRREV

Crispr_ID: NC_009767_96

• CRISPR_ID: NC_009767_96
• CRISPR_location: 5302325-5302413
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_96

Consensus_repeat	Method
CACGCTTATGAGGGATGGTCAAG	CRISPRCasFinder

spacers of NC_009767_96

>96.1|5302348|43|NC_009767|CRISPRCasFinder
GTTTCCCCGACCGCGTTATCTCGCACCACACTGCGTGCCGCAC

CRISPR arrays and Neighbor proteins around NC_009767_96

CRISPR arrays

The CRISPR arrays of NC_009767_96

>merge|NC_009767|96|5302325-5302413|CRISPRCasFinder
CACGCTTATGAGGGATGGTCAAGGTTTCCCCGACCGCGTTATCTCGCACCACACTGCGTGCCGCACCACGCTTATGAGGGATGGTCGAA

>NC_009767|96|87|5302325-5302413|CRISPRCasFinder
CACGCTTATGAGGGATGGTCAAG	GTTTCCCCGACCGCGTTATCTCGCACCACACTGCGTGCCGCAC
CACGCTTATGAGGGATGGTCGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122552.1|5312278_5312722_-|ATP-binding-protein	unknown	unknown	gnl|CDD|379279
NC_009767.1|WP_012122539.1|5297789_5298878_-|AAA-domain-containing-protein	unknown	unknown	gnl|CDD|274135
NC_009767.1|WP_012122546.1|5303901_5306970_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|223496
NC_009767.1|WP_012122538.1|5296711_5297845_+|hypothetical-protein	unknown	unknown	gnl|CDD|223203
NC_009767.1|WP_012122544.1|5302430_5303114_-|D-lyxose/D-mannose-family-sugar-isomerase	unknown	unknown	gnl|CDD|377827
NC_009767.1|WP_012122541.1|5299189_5299891_-|LON-peptidase-substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|366967
NC_009767.1|WP_012122551.1|5311810_5312173_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132914
NC_009767.1|WP_012122553.1|5312725_5313190_-|ATP-binding-protein	unknown	unknown	gnl|CDD|379279
NC_009767.1|WP_012122537.1|5295696_5296692_+|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|273500
NC_009767.1|WP_012122536.1|5295449_5295677_+|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl|CDD|378250
NC_009767.1|WP_012122543.1|5301094_5302285_-|methyltransferase	unknown	unknown	gnl|CDD|185082
NC_009767.1|WP_049768926.1|5307034_5308198_-|ATP-grasp-domain-containing-protein	unknown	unknown	gnl|CDD|316093
NC_009767.1|WP_012122540.1|5298886_5299171_-|DUF503-domain-containing-protein	unknown	unknown	gnl|CDD|377364
NC_009767.1|WP_157042726.1|5309133_5310030_-|VOC-family-protein	unknown	unknown	gnl|CDD|226383
NC_009767.1|WP_012122542.1|5299894_5301088_-|bifunctional-ornithine-acetyltransferase/N-acetylglutamate-synthase	unknown	unknown	gnl|CDD|239065
NC_009767.1|WP_012122534.1|5293726_5294371_+|hypothetical-protein	unknown	unknown	gnl|CDD|274009
NC_009767.1|WP_012122545.1|5303115_5303877_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl|CDD|335469
NC_009767.1|WP_012122535.1|5294432_5295287_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_009767.1|WP_012122549.1|5310217_5311468_+|MFS-transporter	unknown	unknown	gnl|CDD|340946
NC_009767.1|WP_012122550.1|5311439_5311796_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122552.1|5312278_5312722_-|ATP-binding-protein	gnl|CDD|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	2.59091e-24
NC_009767.1|WP_012122539.1|5297789_5298878_-|AAA-domain-containing-protein	gnl|CDD|274135	TIGR02442, Uncharacterized_protein_Rv2850c/MT2916, cobaltochelatase subunit. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (pfam06180). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis (TIGR02257/TIGR01650/TIGR01651). A number of genomes (actinobacteria, cyanobacteria, betaproteobacteria and pseudomonads) which apparently biosynthesize B12, encode a cobN gene but are demonstrably lacking cobS and cobT. These genomes do, however contain a homolog (modelled here) of the magnesium chelatase subunits BchI/BchD family. Aside from the cyanobacteria (which have a separate magnesium chelatase trimer), these species do not make chlorins, so do not have any use for a magnesium chelatase. Furthermore, in nearly all cases the members of this family are proximal to either CobN itself or other genes involved in cobalt transport or B12 biosynthesis.	2.16276e-81
NC_009767.1|WP_012122546.1|5303901_5306970_-|AAA-family-ATPase	gnl|CDD|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	7.2677e-69
NC_009767.1|WP_012122538.1|5296711_5297845_+|hypothetical-protein	gnl|CDD|223203	COG0125, Tmk, Thymidylate kinase [Nucleotide transport and metabolism].	0.00561325
NC_009767.1|WP_012122544.1|5302430_5303114_-|D-lyxose/D-mannose-family-sugar-isomerase	gnl|CDD|377827	pfam07385, Lyx_isomer, D-lyxose isomerase. Members of this family of sugar isomerases belong to the cupin superfamily. The enzyme from Cohnella laevoribosii has been shown to be specific for D-lyxose, L-ribose, and D-mannose. E. coli sugar isomerase (EcSI) has been structurally and functionally characterized and shows a preference for D-lyxose and D-mannose.	4.71896e-149
NC_009767.1|WP_012122541.1|5299189_5299891_-|LON-peptidase-substrate-binding-domain-containing-protein	gnl|CDD|366967	pfam02190, LON_substr_bdg, ATP-dependent protease La (LON) substrate-binding domain. This domain has been shown to be part of the PUA superfamily. This domain represents a general protein and polypeptide interaction domain for the ATP-dependent serine peptidase, LON, Peptidase_S16, pfam05362. ATP-dependent Lon proteases are conserved in all living organisms and catalyze rapid turnover of short-lived regulatory proteins and many damaged or denatured proteins.	4.85668e-32
NC_009767.1|WP_012122551.1|5311810_5312173_-|STAS-domain-containing-protein	gnl|CDD|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	7.82593e-18
NC_009767.1|WP_012122553.1|5312725_5313190_-|ATP-binding-protein	gnl|CDD|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	3.81118e-27
NC_009767.1|WP_012122537.1|5295696_5296692_+|NTP-transferase-domain-containing-protein	gnl|CDD|273500	TIGR01208, rmlA_long, glucose-1-phosphate thymidylylransferase, long form. The family of known and putative glucose-1-phosphate thymidyltransferase (also called dTDP-glucose synthase) shows a deep split into a short form (see TIGR01207) and a long form described by this model. The homotetrameric short form is found in numerous bacterial species that incorporate dTDP-L-rhamnose, which it helps synthesize, into the cell wall. It is subject to feedback inhibition. This form, in contrast, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced. Alternate name: dTDP-D-glucose synthase.	4.68801e-63
NC_009767.1|WP_012122536.1|5295449_5295677_+|zinc-ribbon-domain-containing-protein	gnl|CDD|378250	pfam09723, Zn-ribbon_8, Zinc ribbon domain. This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.	5.77027e-12
NC_009767.1|WP_012122543.1|5301094_5302285_-|methyltransferase	gnl|CDD|185082	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI.	2.95028e-133
NC_009767.1|WP_049768926.1|5307034_5308198_-|ATP-grasp-domain-containing-protein	gnl|CDD|316093	pfam13535, ATP-grasp_4, ATP-grasp domain. This family includes a diverse set of enzymes that possess ATP-dependent carboxylate-amine ligase activity.	1.70074e-12
NC_009767.1|WP_012122540.1|5298886_5299171_-|DUF503-domain-containing-protein	gnl|CDD|377364	pfam04456, DUF503, Protein of unknown function (DUF503). Family of hypothetical bacterial proteins.	1.16331e-35
NC_009767.1|WP_157042726.1|5309133_5310030_-|VOC-family-protein	gnl|CDD|226383	COG3865, COG3865, Uncharacterized protein conserved in bacteria [Function unknown].	8.81394e-47
NC_009767.1|WP_012122542.1|5299894_5301088_-|bifunctional-ornithine-acetyltransferase/N-acetylglutamate-synthase	gnl|CDD|239065	cd02152, OAT, Ornithine acetyltransferase (OAT) family; also referred to as ArgJ. OAT catalyzes the first and fifth steps in arginine biosynthesis, coupling acetylation of glutamate with deacetylation of N-acetylornithine, which allows recycling of the acetyl group in the arginine biosynthetic pathway. Members of this family may experience feedback inhibition by L-arginine. The active enzyme is a heterotetramer of two alpha and two beta chains, where the alpha and beta chains are the result of autocatalytic cleavage. OATs found in the clavulanic acid biosynthesis gene cluster catalyze the fifth step only, and may utilize acetyl acceptors other than glutamate.	1.35168e-134
NC_009767.1|WP_012122534.1|5293726_5294371_+|hypothetical-protein	gnl|CDD|274009	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	2.49602e-08
NC_009767.1|WP_012122545.1|5303115_5303877_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl|CDD|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	2.21077e-53
NC_009767.1|WP_012122535.1|5294432_5295287_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.6902e-37
NC_009767.1|WP_012122549.1|5310217_5311468_+|MFS-transporter	gnl|CDD|340946	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.36706e-78

Protein sequences

>NC_009767.1|WP_012122543.1|5301094_5302285_-|methyltransferase
MAIVILHPGKERPVVQRHPWVFSGAIARIQGRFPDRGEVVDVQAASGEWLARGCWSDGSQIRVRLFTWNPDEPIDDALIRRRIERAIDGRRRLGMLTDDGACRLVYAESDGIPGLIVDYYAGFLVVQLLTQAMALRRAAITRVLAETLVPRGIYERSESDVREKEGLPPASGVLWGETPPDCVHVRLPGDLWHAVDLRTGQKTGAYLDQAFNRWRVAMHCTGAEMLDCFCYAGGFTIAAARAGARHAIALDTSESALEMLRAGLALNAIATPVETVAADVFQMLRRYRDEQRRFDVVVLDPPKFAHTQAQVERATRGYKDINVLAMQLLRPCGILATFSCSGLVSSDLFQKIVFGAALDARREAQIIERLTQSPDHPVLLTFPEGAYLKGLICRVW
>NC_009767.1|WP_012122542.1|5299894_5301088_-|bifunctional-ornithine-acetyltransferase/N-acetylglutamate-synthase
MSYNIIEDGHISSPAGFRATGVSCGLKEIRARDLAIVYSQLPCRVGALFTTNLIVAAPIFFNQAILARNRDAIRAVVINAGHANAGTGQPGLATVVECAKIAADELEIPRDSVLMLSTGQIGVAPPLDRMREGIRRAASELDSNGGRRAALAILTSDTRPKERAFRVSLREGRTVTLAGMAKGTRMVSPHLATLLCVITTDAPIESRLLMRALDQSVNRSFGRLHIDGDMSPNDAVLVLANGAAGGPPIIDGSRELGVWQQALDALCHDLAQQVLRDAASGGKHILITVRGASNDAAASQVARAVARSTAVRHMCARNLPDWGGMLVAVGASGVDLRPDMLELRIGAVTVMDDGAPVRFDPTALVQALSGPEVELAIDLHTGAGTATVWTCTTGMEP
>NC_009767.1|WP_012122541.1|5299189_5299891_-|LON-peptidase-substrate-binding-domain-containing-protein
MKLPLFPLHTVLFPGAPISLHIFEERYRLMIGQCLAQQQPFGVVLLRSGSEVSPDDPFIRSLRRQLNVEEDDIVREAVVPFEIGTIARITESQQFDDGRYLLIAQGQRRFRVQYIIQHQPYLVASVSQLAEDTSTLSGAEITRLRQTYEQYWQTMTRVTGREYDYEELPVDAVELSYWLAHRFRVDNQRKQRWLESDVATRLREVTGMLNVEIALLPRTARRRAGDAWPWSWN
>NC_009767.1|WP_012122540.1|5298886_5299171_-|DUF503-domain-containing-protein
MIVAACMVTLRLPGIRSLKEKRSIVKSLLGRMRNRFNVSVTEVDAHDNHGRAVIGIACVSGSGDYVEGQIQAVLRWIEEERPDLEILAADIELL
>NC_009767.1|WP_012122539.1|5297789_5298878_-|AAA-domain-containing-protein
MDDVLPYPFLAIVGQAELKTALVLALINPQVGGVLLIGPYGVGKTTAVRGLLDVMPLVDIEETDEAGAPVKRRRPMRIIELPLNARMEDVVGGINERVALEQQRVMLEEGVLARAHRNVLYIDEVNLLDARVVDAILDAAAQGRTFVRRGPMTRLYPSQFVLIGSMNPQEGALRPQILDRFGLRVWVAPLMDRNQRLEIYRRARRFREHPEAFRAEYADETGKLKQEIAAAREILPQVTIDPAAERFAIDCIQRLAIPSHRAEIALFEAARARAAADFRLTATIDDIRHVAILALRQRRSVQIDEYAAALALEDAAIERVIARDGAAPSRRRSRKKTSSAHEGGVTLPMPAEAAGQDRSSDT
>NC_009767.1|WP_012122538.1|5296711_5297845_+|hypothetical-protein
MLHFPSPVGDGAVGMAGEGQRKAFQYGLRPPLLRLSNRDNWDASWGEQELIQRMAALAHTAGLPFSRTLIVAYYVSLKTNPFVVLTGIEGAGKTELATLFAETLLGHGSPQYALINGDSSWLGATGDQRSFRSLFDHFTSLRFLELLQEAADPGSAGKVFVVCFDGMHPAEVNYYFTTLLSVDEEGRTRLRLPGVSEDERPIVPANVSITATVNTAEGVGVLSADVLRRAGVIAFRARRSTQVFWHPPTPAPVGLQRLWLRAGRRDAAAAREHLFQIIGSTQWNRMGCSEPLAVALRRAGMALTPRLRQDVMLYVANSFDAEGRGLFDPDDVLRNTQIAFDHQVAQRLIWRLHDVPDPMLTYLMSDPDRLPPLAWAG
>NC_009767.1|WP_012122537.1|5295696_5296692_+|NTP-transferase-domain-containing-protein
MKVIIPTAGLGTRLRPHTYSKPKPLVSVAGKPVLGHILDTLTRFPIDEMIFITGYLGNQIADYVTSNYKIPARFIEQTELKGQAHAVYLAREVVDGPTLILFVDTIFEADLSCLTEQDIDGAIFCKEVDDPRRFGVAFTKDGFITRLVEKPVTDESKLAMIGLYYIRDIQWLMRAIEVLMLRNIQTKGEYFLTDALQLMVENGARFTAPTVDVWEDCGKPETVLQTNRYLLDHGRDHVDASRLDGSIIIPPVYIDDTARVINSIIGPYVSIAAGAIVKDSIIRDSIINRDAQIVSATLQSSLIGDHAVVLGDFRELNVGDSSEIRYGRPAH
>NC_009767.1|WP_012122536.1|5295449_5295677_+|zinc-ribbon-domain-containing-protein
MPLYEYQCSDCAREFDALRPIHRADEIIDCPACGSRRVQRKISIIALKIDAASPRSGGACCGGSCGCASRSDTTD
>NC_009767.1|WP_012122535.1|5294432_5295287_+|alpha/beta-hydrolase
MSMIVIDNQTVHYEVFGRGRPVLFLHGWMGSWRYWYPTIEQVEKQYRAYSFDFWGFGESRRKSTTESIGNYSRQVIRFLDALGIDKVMLVGHSMGGMVALKTALDAPTRIAKVVTVGAPIVGDSLSWFLKLMYYRPIANTFANAPWLRRFLFRHFLGETSDPAVQEILDDSLKSSAVTLQRSIASMLHTDLRPEIGRLAVPALIVHGGRDEIVNPNQADLFHHVPPAQVVVMPKSRHFPFLDEPDQFNTLLLGFLGHDSSSSFRSSFRQPVINASFPAHKPAID
>NC_009767.1|WP_012122534.1|5293726_5294371_+|hypothetical-protein
MSVLFVALGIMVLALLALLLWFVPHLLHQQSARVANETAQLREMLLDLLNEQEAVAMRQAQLGASLSTLQGRLEALAQNGSVSRTSPDLVSTIDQLEERLSDLQRQIQSWLDGRQHGLQARDRQDNEAWANLMGLLAAIQDRLGALSRDRANAMAALQASQLLDDLEREMQHLRAISEDIATLQNRLRRSLSEREQHLTLARTRLTDTITMRGA
>NC_009767.1|WP_012122544.1|5302430_5303114_-|D-lyxose/D-mannose-family-sugar-isomerase
MKRSTINAILRAADTFIRERGFCLPPFAYWTPDEWRARGPECAEIVDNRLGWDVTDFGTGDFVRTGLTLFTLRNGNPRDPAKKPYAEKILIVEDGQVTPLHFHWRKTEDIINRSGATLVVQLYASTPDEQIDASQSIDISLDGVRRTVAAGSVVRLRPGESITLPPRLYHAFWGEGGRVLVGEVSSLNDDAADNRFLQPIGRFPHIDEDEPPLYLLCTDYERFYVVS
>NC_009767.1|WP_012122545.1|5303115_5303877_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MNPADVSDLLPDFVFVPSQPFIMGTPEHELGALAKVFGGTRESYREEAPQHTLTLKPFAIARVPVTNALYAAYVADAEARPPLVWRGAAPPDNLRDYPVVDVSWKEAQQFCRWLSETTATPYRLPTEAEWEYAARGSDGRRFPWGDGWDPARANTRDGGNSGIMPVGMKPSGASPFGCLDMAGNIWEWTVSLDAAYPYRPDDGREDLDAPGRRILRGGSFANPRSFARCACRLRLDPTVCNEFLGFRLAFSVM
>NC_009767.1|WP_012122546.1|5303901_5306970_-|AAA-family-ATPase
MIPRTLTLQNFMCYREGLPPLVLDGISIACLAGDNGAGKSALLDAITWALWGEARLKSDDDLVALGATEMMVDLEFTLDGQDYRVIRRRIRGKRGGQSQLDFQVRDENGWRSLTPGGIRETQQLIIRTLRMDYEVFANSAYLRQGHADEFTRKEPAKRKQVLADILGLSVYEDLESRAKERARAIEGQIRGLEGQIGELRRQAERRDVLVGFVRDAEQRVADARQRITEAEQAFQAAVAKVQELETVRTIRDNRQEQIHQRRAERDAQKQWLDRQMDIRERAEGWIARRAEIEEGIRALRAAEAERDRLAALRDEYDRLQQRRATLVQALAEAEHALRADLRVAETQVQTMRERAARRPKLVAERERLAAQLTDQTPMIEALSAARTRRTDLTDRLRRVNELLRRRTELEGDIKLKHDSLVATREEQKRILRTLADQLKHETRWRAELAEALAERTRINEEKDCLEILRNDERVLAEQVGGIRAECETVRRQGEQINEKLRLLGPDVTVCPLCKSELGHDGIVHIQAEYERERQALRQWYAAAKRDADQLEAQLKRLRNDIRAAENRIAALPDLQGRIARLESDLARCDTLRQQQIEAQRLHDDVAMRLMKNDYELAAREELKRIDAEMTALGAIETLEREIGALDRQVAALENRSREQATLQAQVDALHREIRQIDDDDPALHEQEQIVAELSRRLAQNDFAHDERAALATLDEQIAALGYSRERYDQAKAEAQALTRWEEDLTRLQHAEEWIAENDDDIARAAERLRQLDAQIASDEAEVQRLDERLRDLAPAARARDAARARLDDLHRELLAFQKDLGEHEANLRRAEEAARGLADAEALRLALLERKSLFDELTLAFGKKGVQAMLIETALPELEREANRLLDRMTDNQLHLTFETQRDTKKGDVVETLEIKIADALGTRVYDAYSGGEAFRLDFAIRIALSKLLARRAGARLETLIIDEGFGSQDARGRERLVEAIISVQHDFRRVLVITHIQELKDMFPVQIEIVKTPHGSVWSLA
>NC_009767.1|WP_049768926.1|5307034_5308198_-|ATP-grasp-domain-containing-protein
MNIVFLSPHFPPNWYLFCVRLRNLGANVLGVADEPYELLHPDLRTALTEYYRVSDLHHYDEVLRALGYFTHRYGKIQRVDSLNEYWLETEARLRTDFNIEGPKITDLPGIKRKSEMKRLFTRAQVDVARGILAHSPAQVRAFAVEVGYPLVAKPDVGVGANHTYKITSDAELDAFLSRQPEGFLIEEYVHGVIQTFDGLADRDGEPVFFTSMQYSNGVLEVVNNDDDIYYLTERDIPPDLEQAGRRILKIFNVRERFFHFEFFRTPKGRLVALEVNMRPPGGLSIDMFNYAGNIDLYNAWANVLINHRVSIPPTRLYHVCYAGRKPFRSYALTHEEVLIRFGDCIVHHQPMHPLFHRAMGAYAYLIRSPDRAEVIAIAQEIQRLSVC
>NC_009767.1|WP_157042726.1|5309133_5310030_-|VOC-family-protein
MVSTSQKIVPHLWFDKEAVEAATFYVSSFPGSHLINATTLRDTPSGDCDVVSFELAGYAFQAISAGPFFTPNPSISFIVYLPTSAQVDTLWSRLSDGGETLMPLESYPFSARYGWVQDRFGISWQLTLSEHSSASLTIIPALLFIGDNYGKAEEALHFYTSVFNASKIGEIRRYGPDQAPDREGMILLADFVLEHQSFIMSESAFPHEFGFNGAISFMVNCETQKEIDHYWECLSAAPEAEQCGWLKDRYGVSWQIVPAVMEKMLRHGTPEQIARLTQTFLPMKKFDLDALQSAYATG
>NC_009767.1|WP_012122549.1|5310217_5311468_+|MFS-transporter
MILCQDTDKHLMKRNALAILFLAVFVDLVGYGMIVPLLPFYVQRVAPGATLVGILSGFYAMAQFLVGPMLGSLSDRFGRRPVLIACLSGTSLAYLLLAIADSLPLLVLALFIDGVTGGNLSIAQASIADSTTPDRRARGLGLIGAAFGLGLMVGPVIGGVLSLTNLSAPALVASMLAFANTLFALAALPESLPPERRRLIPLDSAKPSHWSMVLRVANPLANLIVLLRIVTIRRVLMVVVLLNLAFSGLYSNFPLFTAARFGWGMFENALFFAFVGICAVTTQGLLLGRMQRWLGDARLARVGMIVMVCALLATGLASAAWMLYPSVGLIAFGSGLAIPALTSLLSLQVSPADQGRLMGGTAALLNLTMIAGPVVAGISFDRAGTAAPYLIGALLGSAALLIFASPTIIPRQEATS
>NC_009767.1|WP_012122550.1|5311439_5311796_-|hypothetical-protein
MDGFLLFVLFAAVLLFAAYLLWRYWAALTATTPEEERFEERIAALNERQAHRYSDEELAAPVTEEDAWRAMVERGRRATRRERATSDLMRRRARKRLPEQTPRLLPGRRVTTLPPDEE
>NC_009767.1|WP_012122551.1|5311810_5312173_-|STAS-domain-containing-protein
MQDDELRVHIREREGVAIIDLVGDVTTFAEEKITGAYNEVSRKGARNILLNFRQNDYINSAGIAILIGVVTEVNRNNQRLAVSGLSQHFQKIFRMVGLAQYIDIYQDEDEAIRGLTAAMA
>NC_009767.1|WP_012122552.1|5312278_5312722_-|ATP-binding-protein
MSNVSSPLSLELSIPSEFGYERVVREAVASFARRIGLSSERVEDLKTAVSEACLNAIEHGNAQTAGMRVGVTCVWENDGLTVRVLDHGLRCYTGHVAPCIACKVHGEAPLRGMGLYLIAQLVDTYGFETSPDGGNVLYMHMHTRSMA
>NC_009767.1|WP_012122553.1|5312725_5313190_-|ATP-binding-protein
MAHVSYDADPVERVVELHLPSRLGYEKVAMDAAASIARRMGFSADRIDALRTALAEAVTNAIEHGNAHDDGMRVLIILTVRPSELVVSVADQGMKSIDQSHLAPAPRIEDSFARADKGGWGIWLIRELMDEVEFTTAPTGGNQVRMVIHLEKQP

Crispr_ID: NC_009767_97

• CRISPR_ID: NC_009767_97
• CRISPR_location: 5342118-5342209
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_97

Consensus_repeat	Method
CAAGCGGCGAGCGGTGCGAAGGTGAA	CRISPRCasFinder

spacers of NC_009767_97

>97.1|5342144|40|NC_009767|CRISPRCasFinder
TGGATTGCCGACGGACCGGTGAGCGACAAGCGGCGAGCGG

CRISPR arrays and Neighbor proteins around NC_009767_97

CRISPR arrays

The CRISPR arrays of NC_009767_97

>merge|NC_009767|97|5342118-5342209|CRISPRCasFinder
CAAGCGGCGAGCGGTGCGAAGGTGAATGGATTGCCGACGGACCGGTGAGCGACAAGCGGCGAGCGGCAAGCGGCGAGTGGTGCGAAGGTGAA

>NC_009767|97|88|5342118-5342209|CRISPRCasFinder
CAAGCGGCGAGCGGTGCGAAGGTGAA	TGGATTGCCGACGGACCGGTGAGCGACAAGCGGCGAGCGG
CAAGCGGCGAGTGGTGCGAAGGTGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122583.1|5345128_5345998_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|215315
NC_009767.1|WP_012122584.1|5346010_5348044_+|phospholipid-carrier-dependent-glycosyltransferase	unknown	unknown	gnl|CDD|224720
NC_009767.1|WP_012122573.1|5333562_5334453_+|zinc-metalloprotease-HtpX	unknown	unknown	gnl|CDD|320695
NC_009767.1|WP_157042728.1|5349593_5351219_-|hypothetical-protein	unknown	unknown	gnl|CDD|224854
NC_009767.1|WP_012122570.1|5329317_5331321_+|protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009767.1|WP_012122574.1|5334716_5335403_+|thiamine-phosphate-synthase	unknown	unknown	gnl|CDD|234590
NC_009767.1|WP_012122577.1|5337058_5338639_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213192
NC_009767.1|WP_012122572.1|5332922_5333372_+|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl|CDD|107221
NC_009767.1|WP_012122579.1|5341312_5342113_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl|CDD|180561
NC_009767.1|WP_012122576.1|5336537_5337062_+|energy-coupling-factor-transporter-S-component-ThiW	unknown	unknown	gnl|CDD|370540
NC_009767.1|WP_012122585.1|5348251_5349199_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042727.1|5340642_5341302_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl|CDD|223692
NC_009767.1|WP_012122586.1|5351523_5351877_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122587.1|5352338_5354291_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|225116
NC_009767.1|WP_041332237.1|5342466_5342820_+|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009767.1|WP_012122571.1|5331454_5332831_+|HD-domain-containing-protein	unknown	unknown	gnl|CDD|182810
NC_009767.1|WP_157042876.1|5343215_5344889_-|hypothetical-protein	unknown	unknown	gnl|CDD|274305
NC_009767.1|WP_012122581.1|5342797_5343202_+|HEPN-domain-containing-protein	unknown	unknown	gnl|CDD|368314
NC_009767.1|WP_012122575.1|5335475_5336288_+|hydroxyethylthiazole-kinase	unknown	unknown	gnl|CDD|236477
NC_009767.1|WP_012122589.1|5355177_5356473_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340838

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122583.1|5345128_5345998_+|alpha/beta-fold-hydrolase	gnl|CDD|215315	PLN02578, PLN02578, hydrolase.	1.01787e-22
NC_009767.1|WP_012122584.1|5346010_5348044_+|phospholipid-carrier-dependent-glycosyltransferase	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	5.04355e-15
NC_009767.1|WP_012122573.1|5333562_5334453_+|zinc-metalloprotease-HtpX	gnl|CDD|320695	cd07336, M48B_HtpX_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase. This HtpX family of peptidase M48 subfamily B includes uncharacterized HtpX homologs and consists of proteins smaller than Ste24p, with homology restricted to the C-terminal half of Ste24p. HtpX expression is controlled by the Cpx stress response system, which senses abnormal membrane proteins. HtpX participates in the proteolytic quality control of these misfolded proteins by undergoing self-degradation and collaborating with FtsH, a membrane-bound and ATP-dependent protease, to eliminate them. HtpX, a zinc metalloprotease with an active site motif HEXXH, has an FtsH-like topology, and is capable of introducing endoproteolytic cleavages into SecY (also an FtsH substrate). However, HtpX does not have an ATPase activity and will only act against cytoplasmic regions of a target membrane protein. Thus, HtpX and FtsH have overlapping and/or complementary functions, which are especially important at high temperature; in E. coli and Xylella fastidiosa, HtpX is heat-inducible, while in Streptococcus gordonii it is not.	1.35157e-152
NC_009767.1|WP_157042728.1|5349593_5351219_-|hypothetical-protein	gnl|CDD|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.7916e-08
NC_009767.1|WP_012122570.1|5329317_5331321_+|protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.17034e-88
NC_009767.1|WP_012122574.1|5334716_5335403_+|thiamine-phosphate-synthase	gnl|CDD|234590	PRK00043, thiE, thiamine phosphate synthase.	1.38397e-81
NC_009767.1|WP_012122577.1|5337058_5338639_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	8.38296e-80
NC_009767.1|WP_012122572.1|5332922_5333372_+|Hsp20/alpha-crystallin-family-protein	gnl|CDD|107221	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.	7.89734e-33
NC_009767.1|WP_012122579.1|5341312_5342113_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl|CDD|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	3.82155e-140
NC_009767.1|WP_012122576.1|5336537_5337062_+|energy-coupling-factor-transporter-S-component-ThiW	gnl|CDD|370540	pfam09512, ThiW, Thiamine-precursor transporter protein (ThiW). Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.	3.28434e-51
NC_009767.1|WP_157042727.1|5340642_5341302_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl|CDD|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	5.93929e-19
NC_009767.1|WP_012122587.1|5352338_5354291_-|PAS-domain-containing-protein	gnl|CDD|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	1.6687e-67
NC_009767.1|WP_041332237.1|5342466_5342820_+|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	2.04572e-10
NC_009767.1|WP_012122571.1|5331454_5332831_+|HD-domain-containing-protein	gnl|CDD|182810	PRK10885, cca, multifunctional CCA addition/repair protein.	9.22448e-64
NC_009767.1|WP_157042876.1|5343215_5344889_-|hypothetical-protein	gnl|CDD|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	1.68827e-47
NC_009767.1|WP_012122581.1|5342797_5343202_+|HEPN-domain-containing-protein	gnl|CDD|368314	pfam05168, HEPN, HEPN domain.	2.97912e-21
NC_009767.1|WP_012122575.1|5335475_5336288_+|hydroxyethylthiazole-kinase	gnl|CDD|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	8.15177e-133
NC_009767.1|WP_012122589.1|5355177_5356473_-|glycosyltransferase-family-4-protein	gnl|CDD|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	4.2852e-94

Protein sequences

>NC_009767.1|WP_012122579.1|5341312_5342113_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MIPRALTIAGSDSGGGAGIQADLKTFMAHGVYGASAITAITAQNTLEVRAVVLLEPTIVVAQIEAVLDDIGADAVKTGMLGNAAIIEAVADTLARYRIERLVIDPVMVAKSGARLLEEDAITTLRERLLPLALVITPNLPEASVLLNRQVTDEHDMADAARDLHALGPRYVLLKGGHLAGDDVVDLLYDGERFVELRAQRLETNHTHGTGCTYAAAIAALIARGLLVEQAVRQAHAYLHEAIVHAPAIGKGYGPVNHLVHGLPTDR
>NC_009767.1|WP_157042727.1|5340642_5341302_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MTMASRFDPRAKALSYLIGSAAIILSTDLIRLAFLSGGLALLLIGIGLGRRWLQVMKALTPTLMLFALVAGWSGGFDAAIGAALRLTALVGAGVLFFGVTPPEELGDALLASGVPSQIAFLLEGALRFTPMMGTLAREVYEAQASRGIRFDGRHLLRNGPLLLTPLLLSVMRFADDLAEGLETRGFGSPQRTPLRDYRLGWRDGALIGVALLLTILIVW
>NC_009767.1|WP_012122577.1|5337058_5338639_+|ABC-transporter-ATP-binding-protein
MRPLVVCDEATYRYRDGTLALDRVSLAIETGEFVVLAGASGSGKSTLCRLLNGLIPHLHGGDLTGRVLIAGQDVRSTPPYALSRSVGLALQNPEAQSLATTVARDLALGPACHGLDRATIAARVREVAALLRIEPLLDRQPVTLSGGELQRVAIAGVLALHPQVLALDEPFAFLDAAGAMRLRETLRMLHERGVAIIVAEHRLADVADLATRLIVLHEGRIVADGAPRTVLAGDVSQWGVEAPPWARLAHVAGIDAMSPTLDGALDLASPNGSALHSSPHNAPVTPPALNWDDVSFARNDRIVLHQAYLSAAAGEIVGVLGANGAGKTTLLKLGNGLLRPQRGTVRVQGQAIGQRPLWEVARSVGLVGQQPGHMLFAPTVQDELEAGPRALRRVDRAWIGHVIEQCRLEPLLHRSPHHLSAGEQRRVAIGAVLASQPSALLLDEPTSGQDALNRKALQKIIGDIARDGMAVVIATHDTEWAYALCTRWAVLDAGRIIASGAPSAICAQPAIVAQARLRLPMAEAIR
>NC_009767.1|WP_012122576.1|5336537_5337062_+|energy-coupling-factor-transporter-S-component-ThiW
MAATTSIVRSQTRRLAYAIVLTALAVALSPISIPVGIAKVFPVQHMVNVLAGALIGPWWGLAVALVTSIVRNALGLGTPLAFPGSIFGVLLAGLIYRATRNIPLTVAGEVIGTGIIGALIGALVVAPYVMNRPMGATALIIPFALSSLVGAVLGALGLLALRRTGYLERPDTRQ
>NC_009767.1|WP_012122575.1|5335475_5336288_+|hydroxyethylthiazole-kinase
MDTINQRIGEMLARVRATRPLIHHITNLVVMNDTANVTLHVGGLPVMAHDVEEVAEMVTHAGALVLNVGTLSPDWVESMLVAGRQANELDIPIVLDPVGAGATQLRTMTNLKLLRSLHIGVVRGNGGEIGALSGAGGEMRGVESIAAPENPLTAARTLAQTYRTVVALTGARDIITDGERGFIVSNGHIWLTTLTGTGCMATTMVAAFAAVERDYLLAAAGGLAMFGLAAELAAEKAHGPASFKTALFDQIYNLTPEQVAAGARIAELEW
>NC_009767.1|WP_012122574.1|5334716_5335403_+|thiamine-phosphate-synthase
MAWSTLVDPSPSVLTNPIPFPSGRGIVYVITDRRAAGERSLIDIVHAALRGGANAIQLRDKDVPARAMIALGEALLPLTRAAGVPLIVNDRVDVALALDADGVHVGQDDIPADMVRRIIGPARILGVSVATVEQAQQAARDGATYVSVGDLFGTPSKPDAGPPIGLTPLTEIARAVDLPVLGIGGITVANAASVVRAGAVGVAVISAVIGAPDPEAATRALCDVAAQR
>NC_009767.1|WP_012122573.1|5333562_5334453_+|zinc-metalloprotease-HtpX
MTRLTNTLKTTALLGALTVLLVLAGQWFGGTQGMIIAFVLAVLMNGGAYWFSDKLALSMAGARAISRYEAPRLYQMVAHLAQRANLPMPRVYLIDSEAPNAFATGRDPQHGAVAVTTGLLQLLNDDEVAAVIAHELGHIKNRDTLISTIAATFAGAVAILADMAQWALLLGGFGRHEDDGEESGLAGLVSGLLLILVAPIAATLIQLAISRTREFEADAAGATISGSPLALASALRKIEAWKQRLPLATNPAMANLYIINPLDGGTLVKLFSTHPPTTERIARLERMAIRQHALVW
>NC_009767.1|WP_012122572.1|5332922_5333372_+|Hsp20/alpha-crystallin-family-protein
MTTALTRFEPFAEALRLSDAVEQLLNESWVMPRSLFGGWAGTSRIPLDLYETDEAYMVTALMPGVPSDKVDIQLEQNMLTIRGEVHVEQPKDAHYLIQERTSGKIERCIRLPATVDAEKISAELKDGVLTIRLPKVEHARPHRITIQTA
>NC_009767.1|WP_012122571.1|5331454_5332831_+|HD-domain-containing-protein
MSLLQHPLLETLAPLFDALARAGGRPLLVGGAVRDLLLGLPPTDIDVEVYGIDGQHLAAALAPFGRVDAVGRSFGVLKLRLDGYNVDVALPARYRPAAAGEPGALAEYDPSLTPREALARRDFTINALALTPSGDLVDYFGGRADLEARRLCHTSEAFGDDPLRVLRAMQFAARFNMRLAPDTAALCRTLLPASAGLPLDRIWREWHKWATLGAHPSAGLRALDESGWLALYPELAALQGCPQHPHFHPEGDVWLHTLYVCDAAVRIAERDALDARDRAVLIFAALCHDLGKPPTTIVEEDGIPRSPGHATAGVPLTRAFLARIGSPHWLEPLVTPLVREHLAHLHTPPTPRVVRRLAHRLTPATLVQWERLVEADASGRPPLPPERPAAAHLALAEAEGAAKNRPAPLVRGRDLIAAGVEPGPRLGALLRRAYEAQLDGAFRTVEEGIAWVLHTNEH
>NC_009767.1|WP_012122570.1|5329317_5331321_+|protein-kinase
MSNLPEWIGHYHLERQIGKGGMSLVWLARHRTLRARQVAIKVLLSQESEWVERFTREAEITSQLRHAHIVPIYDHGYQAPFYYTVMEYVEGGSLRDLLSKRGRLPLDLALHIFRCAAAALDYAHAHGVIHRDISTGNILVDQDGARVFLADFGIARESGKTSLTTVHKVMGTRGFFSPEHIASATAVTHLSDLYSLGVVLFVMLTGALPWSYIPGPGEDGGPFVPLMSLRDRGVTGLPTELDTVIHAMLAPDPSKRYPSAQAAVEALEQVLRRHTSTTQVMAGAPASAPPVPAAPPEEPHPVEQTLAPDLIKAPIQEALKRARELNDPREIARLLNAWSNARPWLRRPSLGRMAAIRQIGHRNVYWYTLRVLYETREPAQTAEEPDHQMTNHKLEREPGRWEVPLPAPKGFENDPGGVVRIPGSTRVVLCDDCKGIGRTICPRCNGNRRIPAPADPTPPVVTTSASVSAESATSAPAQAAAAPRLIPCPDCQGSGGLHCKRCDGTSRLVVHKTLRWHRRAERMTARDDLPRIDEDWLEKRCKKHTIYREQENGGFRPEWRLVPNIQAMIQEAEACLNPDTRILFSEVTVRFIPITEIVFDLDEWKPAKATGQKGQSREPVLYRWYIYGFENILPDDRRFLNRDRIIALGATGVSVAAIIALILLLVL
>NC_009767.1|WP_041332237.1|5342466_5342820_+|nucleotidyltransferase-domain-containing-protein
MTDLSLARERHVAVLERTLHTMVAQLSAMPTVHRVILFGSYAAGRRDLFTDLDLLVVMETSLDFVSRTVDLMQHLHIEAPVDLLVYTPEEIERMRDQSFLRHALATGKTLYEKRPEH
>NC_009767.1|WP_012122581.1|5342797_5343202_+|HEPN-domain-containing-protein
MRKDPNIEGARWLQQAQIDLHWCRHLRDQGAWYLACFLAQQVAEKALKAFLYAQGEELVIGHSVRQLCARAGVYDPNFQQTLSRWGILDSYYIPTRYPNGLPGDIPANVYNQEIADSAVQLAAEVVSAVETHFA
>NC_009767.1|WP_157042876.1|5343215_5344889_-|hypothetical-protein
MPLARLASSEPQRPALPGQGRILFAAARGDNGAFDIFSADLAGERAANLTADPYPDRSPSWSPDANHVVFASRRGDNWDLYVMRADGSDLRRLTNHPAYDGEPSWSPDGRRVAFTSMRDGNPEIYTLDLIGGDARRITTHPAADAQPTWSPDGRRIAFTSWRDGNQEIYIADAESGAVINLTNHPAPDHSPAWSPDGGRIAFISDRDGGGNLHIRDLITGEELRAGPDNLGLRDPAWTPGGGLMAVAPWALGGRRFFSRQGVALFSPGMPGGTFVVASLHGYADPSWSNRAVTPLLPDERWLEGRSFDATAPPVDVASLPRGMVALGDVRAGGIPALAAAVKPSFDALRRDVIEASGYDFLGQLSEASRAVDFQNGTSSFTSWHKAGRAFDTRWDYRVNGQQILYISPEWRAGRLFWRLYLRTSRQDGSMGEPLTAPVFDVQNRRLLPPPAGYFVDFTALAAAHGWNRIAAQERDTFDWRTQILALEYWHFERRDGLSWYQAMRLVHDDQTLERIFTIERVLEAGARPQFFPFLGLPWAQLPPPVAGPISLPMGRRQ
>NC_009767.1|WP_012122583.1|5345128_5345998_+|alpha/beta-fold-hydrolase
MSINGYPVDAPRQFYRWRNYQVAYYTAGAGSPILLIHSINAAASSFEMRRPFAALRSDHQVFALDFLGFGGSDHPRRAYNADDYIDLIGDFARDVVGKGATVIASSLGAAYTIRAAARHPGLFGPLTLICPTGIRNLAQPQRRGWSYEVLAGPLGDLIFRALASRPSIAYFLRTQSYYDPSVVDDHLIEGFYRAAYQAGAKWAPICFLTGLLNCDVREAFAQLHQPILLVWGRYADLTPLRSADAFLARNPCARLAVVDKARLSVQDERPAEFMHLVKEFLAANRSQSV
>NC_009767.1|WP_012122584.1|5346010_5348044_+|phospholipid-carrier-dependent-glycosyltransferase
MKRTLVALFLIALAPRIWALNWGLPYVEHPDEPALVETVVRMVQEGDWNPRRFVYPSLSFYLLAGVVFLHAQWGIATGIYASIADLPLKTYLFTLAPDLYIWLRALIAILGAATVPLIYILARRMFDAPSAYLAALTLSVAEYHVQHAHFITTDAPTGLWTTLALLGIWNVAERGRLRDYVLTGIATGLAAGTKYQAGVVGLALGAAVAARLIDSRTTGELTRSEVTAHIRGIAVAAGLALIVFALTTPFAILDMSSFRRSIASTMTQYATNEGQGDFSGAWRLDGYARFFWEDGLLPSGVLLMAAGLPFLARCAPRQTMILIAAILVGLAPLAPQTVHFMRNTLPVFPLLILLASGATISLGRAIGRLQCLNSQPMKPQTVSNRVLMTLPIILGASALIAPQIQETTWRLSYWSRPYTLVQAADVIRAEPRGMLAAVEANPVQWANDPVVHPVDSVSDHPPEWYLSRGYRYLLLNEDRRRNQENYARLLESGMPLLVMPPRDLGLQPGPGGIVLDMGERIDLIPFTRRSARFGDSIDLLGYELQPGDLRSRITPLEGANLRIFAPGQSLQLNLYWRALTRMDRNLVLFIHINNQYDQRVAQRDLPLRLDDYPTSRWRVGELVIDRGDMPLPPLPEGEYRLLIGLYDAETGVRLPVRDQTAVELTTIRVIHTAPSSN
>NC_009767.1|WP_012122585.1|5348251_5349199_+|hypothetical-protein
MYEYLYDSEAAMAIGRNKIRQFTDAMTIQWANGKNEARLTPGSGRFVSHVGWYAEVGRDDEFDRFISQAGIPQMEIRHPRQGAAAQIVRHWNLGEQIRFFPVTSGPVATTVAASLSPRNIAATIEAGIGLRWGRGEGERSKMAIRGYLQIRGPKRADAGAPDEWLLYPRLVQISVRSRMTDELLAALVDHVRVCEIADTLVDRAKHPDVIHCYELALPIGPGQEEQWGKGETTTVMPIASLHPQTIDLSYLRSLWRPDQVVELALRDWPDVQAWAQEFSIGGYAETAGQSPALADDAHTGNEAMAANGRAAYVDG
>NC_009767.1|WP_157042728.1|5349593_5351219_-|hypothetical-protein
MVLPDGSIGCRVTYRGAQTMMYDPEKHHRRSIRLKGYDYSQPGAYFVTVVTHRRKCLFGDVVNGEMRLNRYGEIVQHAWFDLPRHYPHVELGAFCVMPNHIHGIIIINGENGENDDNDDNGVNDDNDDNDDNGVNDENDDNGENDDNGENDDNGVGAGLRPAPTWASSVERGGGSVERGASSVERGGGSVERGGGSVERGASSVERGASSVERGGGSVERGASSVERGGGSVERGASSVERGGGSVERGASSVERGGGSVERGGGSVERGASSVERGASSVERGGGSVERGASSVERGGGSVERGASSVERGGGSVERGGGSVERGAPSVERGGGSVERGASSVERGAPSVERGGGSVERGASSVERGGGSVERGASSVERGGGSVERGASSVERGGGSVERGASSVERGGGSVERGASSVERGGGSVERGASSVERGGGSVERGASSVERGGGSVERGASPTDPDPSMARHSLSEIVRALKSFSARRINDIRQTPGVPVWQRNYHDRIIRNAIEYHYVHRYIETNPVRWMKDRNNPRKRP
>NC_009767.1|WP_012122586.1|5351523_5351877_+|hypothetical-protein
MAGLFQRISDAVYREYDRRIKRASLITEYGIAHHHDHEEEHADNNVAIVNLSPGMSVGDEHAQTDALAKADEASEERLEIEPLATDSETTRTPVATAEEEIEAEIINAPPGAPIPRE
>NC_009767.1|WP_012122587.1|5352338_5354291_-|PAS-domain-containing-protein
MPENTSGGSSRRKMTRRELSARYDELRRHSAHLRAALYSIGDAVIITNIDGRISLMNPTAERLTGWAEPEALESPIEQIFRIVDEETRAMLESPVARVLREDAVVRLSPRAVLINRNGRAIPIGDTSAPIRTESGDVTGVILIFQDQTSVRTTFHAVQQAREFAENIVATVREPLLVLSRNLRVVSANRAFYQMFHTTPADTLHQHIYEIGNRQWDIPELRRLLEEILPHNAHFDGYEVTHNFEHIGQRTMLLNARRVRHSDEFILLAIEDVTERVRAEQRLHMHLRRLRALRTIDQAIISALDMRAVLDILLDQVTSYLYVDAASILLLDPYAQTLTYAAERGVRSRANQRTTLYTGEGYAGRVVLDRRMLFIADLRESELEPSYAPVLQQEAFVTYCGVPLIAKGQVKGVLELFLRTRLDPDQDWFDFLETLAVQAAIAIDSVILFETMQRSNAQMILAYEATIRGWAHALDLRDRETEGHSQRVTDLTVRLARAAGLSDEQIAHIRRGALLHDIGKLGVPDSILRKPGQLTEEEWAVMHQHPDYAYTMLSPIEYLRPALDIPYSHHERWDGTGYPRGLKGEQIPLAARLFAVADVWDALQSDRPYRARWQREEALDYIRSQAGTHFDPDVVALFLKVIGEAPDDAAP
>NC_009767.1|WP_012122589.1|5355177_5356473_-|glycosyltransferase-family-4-protein
MHIGVDISLLRIAQAGVLTYHRSLLDHLVRAGRDCHFTLIDVLPLNPGRSMLWLAALDSPNVRVVRCPGVRRGYLSALPAFRDGVAHPIAARIDRILDPIWSQLAVAEMGLELRGATRFVEVFHASDQLPYAPPGAATVLTIHDLTTRRFPDMHVAENVALHAAKERFARDRADRIIAVSEATRRDIVCELGIPPERISVVYEAADVRFRPRAPDETCSVLARYDIAHGAYVLSVGTLEPRKNYIRLIEAYAVLCARYAADARRLPPLIIAGGYGWKHDAILAAPERAGVAGQVRFIGRIPDDDLPALVAGARLFVYPSLYEGFGLPPLEALASGTPVVVANTSSLPEVVGDAGLYCDPYQVSDIARQIAALLDSEDLALRLRHAGIERAKQFSWERAARETLAVYAQARAERCARRRWQFTGFIPTAMTR

Crispr_ID: NC_009767_98

• CRISPR_ID: NC_009767_98
• CRISPR_location: 5453094-5453319
• CRISPR_type: TypeIII-B,TypeIII-C?
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_009767_98

Consensus_repeat	Method
NNNNNNNGGCGCGAGGGGCCCGACCATGGCGTAGCGCGAGATT	CRT

spacers of NC_009767_98

>98.1|5453130|28|NC_009767|CRT
CGAGATTTATCTCGCATTTGTGGCGCGA
>98.2|5453194|34|NC_009767|CRT
TATCTCGCAACGAGGCGCGCGGCGCGCGGCGCGC
>98.3|5453264|20|NC_009767|CRT
GATCTCGCAACGAGGCGCGA

CRISPR arrays and Neighbor proteins around NC_009767_98

CRISPR arrays

The CRISPR arrays of NC_009767_98

>merge|NC_009767|98|5453094-5453319|CRT
GGCGCGAGGGGAGAGGCGCCCGACAATGGCGTAGCGCGAGATTTATCTCGCATTTGTGGCGCGAGGCGCGAGGGGCCCGACCATGGCGTAGCGCGAGATTTATCTCGCAACGAGGCGCGCGGCGCGCGGCGCGCGGCGCGAGGGGCCCGACCATGGCGTAGCGCGAGATTGATCTCGCAACGAGGCGCGAGGCGCGAGGGACCCGACCATGGCGTAGCGCGAGATT

>NC_009767|98|11|5453094-5453319|CRT
GGCGCGAGGGGAGAGGCGCCCGACAATGGCGTAGCG	CGAGATTTATCTCGCATTTGTGGCGCGA
GGCGCGAGGGGCCCGACCATGGCGTAGCGCGAGATT	TATCTCGCAACGAGGCGCGCGGCGCGCGGCGCGC
GGCGCGAGGGGCCCGACCATGGCGTAGCGCGAGATT	GATCTCGCAACGAGGCGCGA
GGCGCGAGGGACCCGACCATGGCGTAGCGCGAGATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122669.1|5461270_5461570_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122659.1|5446723_5448292_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274350
NC_009767.1|WP_012122667.1|5458139_5459615_+|o-succinylbenzoate--CoA-ligase	unknown	unknown	gnl|CDD|235146
NC_009767.1|WP_041332263.1|5459899_5460832_-|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl|CDD|270704
NC_009767.1|WP_012122664.1|5453612_5455073_+|isochorismate-synthase	unknown	unknown	gnl|CDD|273127
NC_009767.1|WP_012122671.1|5462973_5463612_+|hypothetical-protein	unknown	unknown	gnl|CDD|224854
NC_009767.1|WP_012122655.1|5442040_5442403_+|response-regulator	unknown	unknown	gnl|CDD|381093
NC_009767.1|WP_012122658.1|5445516_5446602_+|PP2C-family-protein-serine/threonine-phosphatase	unknown	unknown	gnl|CDD|225118
NC_009767.1|WP_041331254.1|5461817_5462687_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|225107
NC_009767.1|WP_012122654.1|5439743_5441969_+|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl|CDD|223716
NC_009767.1|WP_012122662.1|5449501_5450632_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122665.1|5455438_5457181_+|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	unknown	unknown	gnl|CDD|236020
NC_009767.1|WP_012122656.1|5442583_5443717_+|chemotaxis-specific-protein-glutamate-methyltransferase-CheB	unknown	unknown	gnl|CDD|234828
NC_009767.1|WP_012122672.1|5464243_5464756_+|N-acetyltransferase	unknown	unknown	gnl|CDD|225695
NC_009767.1|WP_012122666.1|5457279_5458143_+|1,4-dihydroxy-2-naphthoyl-CoA-synthase	unknown	unknown	gnl|CDD|180958
NC_009767.1|WP_085979109.1|5448749_5449082_+|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132914
NC_009767.1|WP_012122673.1|5464795_5465557_-|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009767.1|WP_041332258.1|5444052_5445510_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|224271
NC_009767.1|WP_012122660.1|5448313_5448748_+|ATP-binding-protein	unknown	unknown	gnl|CDD|379279
NC_009767.1|WP_041331251.1|5450828_5451458_+|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122659.1|5446723_5448292_+|tetratricopeptide-repeat-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	5.72801e-22
NC_009767.1|WP_012122667.1|5458139_5459615_+|o-succinylbenzoate--CoA-ligase	gnl|CDD|235146	PRK03640, PRK03640, o-succinylbenzoate--CoA ligase.	6.29014e-162
NC_009767.1|WP_012122664.1|5453612_5455073_+|isochorismate-synthase	gnl|CDD|273127	TIGR00543, Salicylate_biosynthesis_isochorismate_synthase, isochorismate synthases. This enzyme interconverts chorismate and isochorismate. In E. coli, different loci encode isochorismate synthases for the pathways of menaquinone biosynthesis and enterobactin biosynthesis (via salicilate) and fail to complement each other. Among isochorismate synthases, the N-terminal domain is poorly conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	2.76289e-120
NC_009767.1|WP_012122671.1|5462973_5463612_+|hypothetical-protein	gnl|CDD|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.31376e-06
NC_009767.1|WP_012122655.1|5442040_5442403_+|response-regulator	gnl|CDD|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	9.72473e-34
NC_009767.1|WP_012122658.1|5445516_5446602_+|PP2C-family-protein-serine/threonine-phosphatase	gnl|CDD|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	2.18716e-57
NC_009767.1|WP_041331254.1|5461817_5462687_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	9.37352e-25
NC_009767.1|WP_012122654.1|5439743_5441969_+|hybrid-sensor-histidine-kinase/response-regulator	gnl|CDD|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	6.13706e-124
NC_009767.1|WP_041332263.1|5459899_5460832_-|aminoglycoside-phosphotransferase-family-protein	gnl|CDD|270704	cd05155, APH_ChoK_like_1, Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase and Choline kinase. This subfamily is composed of uncharacterized bacterial proteins with similarity to APH and ChoK. Other APH/ChoK-like proteins include ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). These proteins catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.81982e-108
NC_009767.1|WP_012122665.1|5455438_5457181_+|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	gnl|CDD|236020	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated.	0
NC_009767.1|WP_012122656.1|5442583_5443717_+|chemotaxis-specific-protein-glutamate-methyltransferase-CheB	gnl|CDD|234828	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB.	1.86448e-119
NC_009767.1|WP_012122672.1|5464243_5464756_+|N-acetyltransferase	gnl|CDD|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	5.38595e-53
NC_009767.1|WP_012122666.1|5457279_5458143_+|1,4-dihydroxy-2-naphthoyl-CoA-synthase	gnl|CDD|180958	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated.	0
NC_009767.1|WP_085979109.1|5448749_5449082_+|STAS-domain-containing-protein	gnl|CDD|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	2.29438e-14
NC_009767.1|WP_012122673.1|5464795_5465557_-|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	3.65347e-10
NC_009767.1|WP_041332258.1|5444052_5445510_+|tetratricopeptide-repeat-protein	gnl|CDD|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	1.82167e-70
NC_009767.1|WP_012122660.1|5448313_5448748_+|ATP-binding-protein	gnl|CDD|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	1.74448e-25
NC_009767.1|WP_041331251.1|5450828_5451458_+|TetR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.08952e-19

Protein sequences

>NC_009767.1|WP_041331251.1|5450828_5451458_+|TetR-family-transcriptional-regulator
MIHSADKCSDQKSTRERILEAALDIFSSKGYHDARLDDIVEVAHISKGSIYFYFPNKERLFLALVDQFADLIERRATEAIERQPRAGIDRVRAAIMAVIETFGKYRRPAKILLVQAVGLGAPFEKKRLEVTDRFAALIKRHLDEAITVGEIQPIDTAVVAHAWMGAIYNLVIRWVMTGDPPAERIPPTLVPLLLRSVNYPVEEKQGNAV
>NC_009767.1|WP_012122662.1|5449501_5450632_-|hypothetical-protein
MKWLDLFLIFCLSAVLIPQTGVAVGRERCFRETGYCISGPILIYWERNGGLRVFGFPISNQSIQTAEDRMLTVQWFERDRLEIQADGHVTAGRLGARYLELQGRPWQTFPTVAQADPGCAYFAVTGHQVCEPFLIYWRVRGGLERFGYPITERMNEEIEGKVYQVQYFERRRMEYHPELAGTPYEVLLGRLGADVMRIDNCVLLEPMYEPIAYAYRRLLGCPIASSRELVNPLGPVQLKMRPVPLAVQRFERGIMLWVRRWGDAPILPEIFVLTADSSDPQRFTWQMFADEWQEGTPIRFDEMPPAGRYAPERGFGYVWVHNAEVRSRLGWAVEPEQGETGGYRQFVRGFILSRPSNDTVFLFLDSGEALVVPRRN
>NC_009767.1|WP_085979109.1|5448749_5449082_+|STAS-domain-containing-protein
MNEVIRREEFGDVAVLHIMTNSVDAVSASAIEAVATATAMRPITVLDFANVSFINSAGISALLKFVVSAKKSGYTLYAMNVTPHHQKVFKMVEMSRYMPPIEERDLAAYR
>NC_009767.1|WP_012122660.1|5448313_5448748_+|ATP-binding-protein
MQQVLVNIPSVPIFERVVRASADEVGRALGFSAERVEDLKLAVSEAVNNAIDHGNKRQPGKLVEVVFALHTDKLEVHVTDEGGGVETVDFSRKVVEDQNLDAGMHRGFGMYLISALVDDCEVNSSQSGTTLTLRLYRRSQDHDE
>NC_009767.1|WP_012122659.1|5446723_5448292_+|tetratricopeptide-repeat-protein
MSSTEPLNFMPLDLDTFNGSERFMAGTRLGAAFGQGIRAYLRADYANAIEHFKAALIAAYIEGEERAQIYDRERAIIYLYIGNALAYQEDWEGALREYLEAVQTDPQLSEAHYNLGVAFAAQGRLDRAIAAFKEAIEHNPRLYEAHFSLGRCYQRLDDAGRAYIHYDQACQARPQAAEPRYYMGLMHQSHGAHELAQRCFAEALRVEPTFVSPELQDEVLVNRSEEEVAQWYYRLSNDLKQQGYEEEAERIYRALLQWRPEEHYARYLLGNLLARARRLDEALEEYAQIPPQDKYYVDARIRISAILKLQNKTREAYDTLFECARLHPANGQLFLNMGKLLYDMNKHAGAIKAFERAVQLLPNDPQAHYLLGFMYNLMGREGWALAAWRKAVELAPDAHSLRYDLGYMYVRRNRYDLAAKEFARVLQFWPDDVETNFMLGLCYKELMEPARAIPLFEKVLRRNPRHVQALYYLGASYLQIGNTSLGKAYLRRYDYLASQEQTSPPTTRRAMRQRSVGMVGSS
>NC_009767.1|WP_012122658.1|5445516_5446602_+|PP2C-family-protein-serine/threonine-phosphatase
MRTRDKQLGRSFTLLSHAPTSRLRRARRPAPPPLQINPEEARRQAEIERELLLARDIQQGLLLEAVPRLPGWEIHAISLPARDLGGDLYDFLPLGDARHGIMIGDVSGKGLPAALRMAVARTVFRYAARSGAMPGSTLARVNRGIIADIPQGMITMLYATLDLRHGIVQIANAGHHYPLLLNGRVSELELSGLPLGVDSDAGYEEICTEIEPGNTIIMYTDGVVEATNNHGEYFGYERLERLLIEGAALKPRALVARLLHELRTWSDAGQDDDITVVAVRRRFARLSEELRSIMHDVLGRERGEEAWLKLPHPGDAGVAAWTEALPEIIKAAQSHLGRGLARELNAQIRLALEEYRDHEKM
>NC_009767.1|WP_041332258.1|5444052_5445510_+|tetratricopeptide-repeat-protein
MRLSPEAFDRLRTLLADYSGVYLDTAQQRVLEAGLAQRVAALGETLESYERHISAPAGRNELHRLAEMVVNHETFFFRNAPQMRALRETLLFELHRRKPPGEPIRIWSAGCATGEEAYSLAITVLETFGLALIRPVEIWATDLSELALEKARTGFYRGRSLNNVTPMLLNRYFVRHGDGFLVSDAVRALVRFEQLNLLETFPPTAYGVDAIFCQNVTIYFRPETRRSLIERFHRCLPVHGLLFLGFSETLWNVFDGFRSREVSGAYVYQKVNPPDRPTQHRSTSPRPSLPTETRRRSPSVVKVASTPSRKARPPVAATTAPTMEEDVGRVEQAQALIDAGRIDEAMDLLRSIHPNSSLAPRALVLVARVHADRGELDLAIAEARRALEIDALRSDAYLLIGTIYARQGQGNEAIQALERARYLDPDAALVSYHLALAYRQAGRQEQAMREFRSALSKLARHRSEDLIEGVEVGWLRTTCEQHLGM
>NC_009767.1|WP_012122656.1|5442583_5443717_+|chemotaxis-specific-protein-glutamate-methyltransferase-CheB
MTRPIRVVVVDDSAMMRRFITDMLQRDPAIQVVGVASNGREAIEVVQRLRPDVVTMDVRMPVMDGVATTEHLMAYCPTPILVLTASLASYEMDITFKMLGAGALEVVEKPHGSDARALEHAARDLVRRVKILSRVKVVTHLRGRRRTPGNDSTAPPAFPAHQAPAHDIPPASSSNVVSSTHSAPDAPLSPVIVIGASTGGPRVIRQIIAGLPRAFPAAVLVVQHIAEGFSEGMAEWLASIGALPVHVAREGSPIHAGEVLIAPDRRNLLVTHHGTVHLSDAPLLIQRPSIDVTMQAVAEVYGSRAVGVLLTGMGRDGAYGMRALYRRQAYTIAQDEASCAIFGMPRAAIQLGAVREVLPPEAIAPRLVEVVAGLVAG
>NC_009767.1|WP_012122655.1|5442040_5442403_+|response-regulator
MAEKILVVDDSKLVTDIVKMRLGMYGYEVRLAHSGEEALKAIEEEVPDLLVLDVHMPGIDGYEVCRRLRDNPALDALRIIMLTSSDDKHAAFEAGVDDYLNKDVDLLNLPNRVKMILEMD
>NC_009767.1|WP_012122654.1|5439743_5441969_+|hybrid-sensor-histidine-kinase/response-regulator
MDLASFYSQFRDETAENIRIVTEGLVALEGNGLEGEARRERIDAIFRAMHTIKGSARMLGLDQIGKVAHTCEHILAAVRDGRRVLDRFLTDELLKGSDAILELLAAAIDGKPSSIDVEALTSHLGRGSPQPSPETPVSPPLEPAQSPGDESAPQPTSKGGRERMRQTVRVRVDRLDRLLNLAGELSIGRQIEESHLQALEELKGLVERQQRSLLTLEAELRRVRLAPAQRDLFDREMNGALNAGERAGSMLRAQLERIGQHTMHKAQLIDDLEQEVMAIRLTPVATLYANLPRAVRELARDLGKEASLALIGETTELDRKIIEVLTDPMVHLIRNALDHGIEPAEERERQGKPRQGLIEIAAQAHGGRVLISVRDDGRGMDPQQLREAAVRKGLIGADAAAALSDQEALELIFMPGFTTAKIITDVSGRGVGMDVVRTNLAEIGGEVQIESQPGVGTTVLLSLPLTLVTTRVLLVEAGSQLFGIPASGCQGTVWVRRTQIRTIEGRAVFQHNQVLTPILRLDELLGIANGNPFANAVRMPALLIGGVRRPMALLIDRLIDEREAVIKPLGPLLEKQRRYSGVLQLGDGRLALLLNPTMLAQLGRGTALVAPTPEQSQQRRARLLVVDDSFATRELIRSILSAAGYEVATAVDGLDALDRIRAETYDLVVSDVEMPRVDGFTLTSRIRSELGKTDLPVIIVTSLASEAHRRRGLEVGAQAYIVKSQFNQNNLLETIRQLIGM
>NC_009767.1|WP_012122664.1|5453612_5455073_+|isochorismate-synthase
MTKPFQQHYGRLISLSMPCPGVSPADLLRHARGQPRSFWESARDGVAFAGMGIAVELMAWGANRFVEIEQQARALFENAVMLDEREPLAAPRLFGGFAFHNDFVPDLAWADFPPAHFVLPHYQLVRVRDSFWLTLNVHAPPGEDPRALAPDLREALLAQVDALQSEPPPLPPRSSARLAYPMPFEQWARSVERIVRQINVGELKKVVLARIAEASFDAPVDVDSALACLAQRYPDTYRFLFEPRPGRAFFGATPELLAQVNGDRVTTMALAGSIRRGATPDEDERLALALLDSAKDRHEHQIVVDEVRNRLASLTRRLDVGATDVMRLSNIQHLHTPISGVLREPRGILPIIATLHPTPALGGEPRAAAMRLIAELEPAPRGWYAAPVGWIDRRLDGQFGVAIRSAVVQATRAWLYAGAGIVAASDPQREWDETNLKFRPMLEGLGHTDRHGLGHLVGTRIATDTTDRHGLGHTDRHGYDGSPQIK
>NC_009767.1|WP_012122665.1|5455438_5457181_+|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase
MPNRNILYATTLVDELARAGLRHVCLAPGSRNTPLVLAFARHPAIRVFSHLDERSAAFFALGLALATDTPAAVVCTSGSAAANFFPAIVEAHQAGVPLLALTADRPHELRDSGANQTIDQVKMFGSFARWSVDVALPEAMPPPVALRNLRTLAARAMAIAGGEPRGVVHLNLPFRPPLEPTPMPGDLTEPPAAAQPRDDGAPYTCFLRSAPPAPPEAVIEPIAAVLEQHERGLIVCGPRCPGGAFGALVSELSQRTGYPALVDGVSGVRFGYPGVIGGYETFLFGEHAFPPPEVVLRFGAVLTSKWLNQYLDTAASPVVIHVRASGVWADDSHRVSHFVVADEAAFIRALIPRLTERQSAWRQRFVEAEARVWAAVEAGIADEPYFDGGAVYDVIDLLPEGASLFVGNSLPVRHLDQFGKPGVRHICAFANRGASGIDGNISTALGIGAGRPDAPLAAIVGDITFYHDMNGLLAVRRCGVPATIVLLNNDGGGIFHRLPINRFEPEFTDYFVTPHGLDFAHAAKMYGLEYVPVKDRTAFRSAFRASIDARAATLIELRTDARTDLVRRNALIQAARATGA
>NC_009767.1|WP_012122666.1|5457279_5458143_+|1,4-dihydroxy-2-naphthoyl-CoA-synthase
MARFTPTLSSLVEWTEVKEYEDITFHIGGGIARIAFNRPEIRNAFRPKTIDEMTEAFLTAWHNQEVGVVILTGNGPSPKDGKYAFCSGGDQTVRGQAGYVDDEGVARLNVLQLQRYIRTMPKPVIAAVAGYAIGGGHVLHVICDLTIAADNAIFGQTGPIVGSFDAGFGSSYLAAIVGQKKAREIWYLCRQYNAQQALEMGLVNTIVPVDELENEAVRWAQEILEKSPIAIRFLKAGFNADLDGQTGIQVLAGDATMLFYMTEEGNEGRKAYLEKRKPDFSKFPRRP
>NC_009767.1|WP_012122667.1|5458139_5459615_+|o-succinylbenzoate--CoA-ligase
MMRDWLSAQAQARPEGAALIIGDTTLTYRALHEQTATFASRLAAAGVEQGAVVGVLLSNRLEAALAVHAAPRLGVTLALFNTRLTPAELDAQVRAAVCRILVCERDTLLAALALPSAPHVLCVDPVDDPRLTPVDRISGDSAAYCEGAIDLDAPFVMMFTSGTTGTPRGVVLTYGAFFASAMASAYRIGVLPGDRWLCVLPLYHIGGLSILLRSCLYGTAVDLWQRFDAPAITERLKATPITLISLVPTMLYRLLDDAGDAPPNLRLVLLGGAAAPTDLLERALEAGWPIATTYGLTEAASQVATALPDEVRRKPGSVGRPLIFTHVRVTNEQGRDQPPGVYGNILVRGPTLMRGYLGETPLDADAWFATGDIGYLDADGDLWVVQRRSDLIISGGENIYPAEVEQALRQHPAVADVAVVGVPSAEWGQQVGAAIVLRDPSVSVEAILAFSRTRLAGYKQPRVVRIVAELPRTASGKIQREAVINLLKVAG
>NC_009767.1|WP_041332263.1|5459899_5460832_-|aminoglycoside-phosphotransferase-family-protein
MTSNRMHADELTISLSLVYRLIAAQFPRWAHLPLRPVPSTGTDNALYRLGDELVVRLPRINWAADLIDKEWLWLPKLAPYLPFAIPVPLAQGEPDENYPWRWAIFRWIEGDPATIDPLPDPEQTAIDLAAFITALQRIDATDGPPPGADDLARGKPLALRDPSTRQAITALDGMIDARLATVVWEDALRTPVWDCAPVWFHGDLLPGNLLFWQGRLHAVIDFGTLGVGDPACDLMVAWNLFSRDGRKLFRDALGVDEATWARGRGWALSQALIFIPYYLYTNPIGVSCAQRTIEEVLADDHGCAIPSWRR
>NC_009767.1|WP_012122669.1|5461270_5461570_-|hypothetical-protein
MSSAAKRGAIAGLVVGILILGGVLAIAAQCLPLRIAPPAAPGPWYCVDPAYSAIGYLAFPVNLLTNDLATAIPLAPLSLITYALIGMAIGAMAGKARST
>NC_009767.1|WP_041331254.1|5461817_5462687_+|helix-turn-helix-transcriptional-regulator
MITLPAAWREANIALALEQQAGGVPDVSLRLYDVLPKLETLNGTLDSARRMADDLVASMQRGGITNAIDRARGLRAELMFRLGDWAAFEAYAQGYHPPKQPLFFPYRLETLLQIRYLARRKAWDESRRLMQEQARLARAAGYLEYEMELHIVGALLEQAAGNSSNAIRMLARALEIGRAGGYVRVFLDEGEEMRTLLAQLRRDDFAASLLAAFGKPAHIDQSALIEPLTEREMDVLKLVAEGLSNPEIAEKLYLSVGTVKTHVKHIYGKLGVDDRVTAAGKARELGLIN
>NC_009767.1|WP_012122671.1|5462973_5463612_+|hypothetical-protein
MSHDIFYRRNLPHIHPKGHAFFVTFSLLHAIPYDVLEQLKAERQNELRQVDLAQRYSIQKKHFGKYDEWLDRCENSPRWLEEPEIAAIVASEIERMNGERYTLIAYCIMPNHVHLLLEGLLAADARHRGQSAKYPLTDTLRLLKGRTARACNLALKREGQFWQHESYDHFVRDDNELGRIIAYILNNPVKAGLVKEWSEWKFFYINPEWGEW
>NC_009767.1|WP_012122672.1|5464243_5464756_+|N-acetyltransferase
MTILIRPESPADLPAIFHANQLAFGRDNEARLVNKLRDANAVVLSLVAEQDGRVVGHILFSPVTIRDGGTEWQAVGLGPMAVLPEVQKQGVGSALIRAALAELKTLGHDVVIVLGHAEYYPRFGFQPTQPFGIRWEIDVPAEVFMLAELTPGALRGRRGVVRYHPAFAGV
>NC_009767.1|WP_012122673.1|5464795_5465557_-|CPBP-family-intramembrane-metalloprotease
MQNQVRVSVPSSSQGARAAILSFFESRPVLSAVILFVAFVVLSTLFGLAAQELLPQFQPEFIALIALSVLVAAGLSALGWWKAAGFNFPAEWRDSRLMVIPFLIVLGLPFLMGIKTGDAGTFVYLAVAYALTGFMEEGLMRGIVLRVLKPTGTTRSVVISSLLFGLMHIGNLLYRNPFIVFAQMLGAFVHGIGLSAIRLRANTIWFPVVLHALHDLALKYTNFPAIPLDVVQVTLLMVYGIYLLRGYKEEASE

Crispr_ID: NC_009767_99

• CRISPR_ID: NC_009767_99
• CRISPR_location: 5473188-5473289
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cmr1gr7,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7

Consensus repeat of NC_009767_99

Consensus_repeat	Method
ACAGTTCTCGATCACTTTGTCCATCTTAC	CRISPRCasFinder

spacers of NC_009767_99

>99.1|5473217|44|NC_009767|CRISPRCasFinder
ACGCACTGTGTGCTCTGCGTCTGATTGTCTGCTTTGGGTAGTTC

CRISPR arrays and Neighbor proteins around NC_009767_99

CRISPR arrays

The CRISPR arrays of NC_009767_99

>merge|NC_009767|99|5473188-5473289|CRISPRCasFinder
ACAGTTCTCGATCACTTTGTCCATCTTACACGCACTGTGTGCTCTGCGTCTGATTGTCTGCTTTGGGTAGTTCACAGTTCTCGATCACCTTGTCCATCTTAC

>NC_009767|99|89|5473188-5473289|CRISPRCasFinder
ACAGTTCTCGATCACTTTGTCCATCTTAC	ACGCACTGTGTGCTCTGCGTCTGATTGTCTGCTTTGGGTAGTTC
ACAGTTCTCGATCACCTTGTCCATCTTAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122686.1|5477490_5478318_-|hypothetical-protein	cmr3gr5	mkCas0067_cmr3gr5_CAS-III-C	gnl|CDD|377130
NC_009767.1|WP_012122691.1|5483806_5484511_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122685.1|5476021_5477134_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|226984
NC_009767.1|WP_012122683.1|5474274_5474733_-|gamma-glutamylcyclotransferase	unknown	unknown	gnl|CDD|119400
NC_009767.1|WP_083760360.1|5471338_5471983_-|NYN-domain-containing-protein	unknown	unknown	gnl|CDD|350237
NC_009767.1|WP_012122684.1|5475350_5476025_-|DUF4276-family-protein	unknown	unknown	gnl|CDD|379470
NC_009767.1|WP_012122676.1|5469866_5470247_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|381090
NC_009767.1|WP_012122681.1|5472682_5472985_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122678.1|5470546_5471155_+|DUF1211-domain-containing-protein	unknown	unknown	gnl|CDD|377696
NC_009767.1|WP_012122688.1|5478707_5479694_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl|CDD|224255
NC_009767.1|WP_012122690.1|5482490_5483810_-|hypothetical-protein	cmr6gr7	mkCas0142_cmr6gr7_CAS-III-C	gnl|CDD|187857
NC_009767.1|WP_012122675.1|5467729_5468371_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009767.1|WP_012122689.1|5479704_5482494_-|CRISPR-associated-protein-Csx11	cas10	cd09701_cas10_CAS-III-C	gnl|CDD|187832
NC_009767.1|WP_012122680.1|5471901_5472561_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	cd09657_cmr1gr7_CAS-III-C	gnl|CDD|377130
NC_009767.1|WP_012122673.1|5464795_5465557_-|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009767.1|WP_157042740.1|5477132_5477300_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122677.1|5470243_5470540_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122687.1|5478328_5478718_-|hypothetical-protein	cmr5gr11	mkCas0060_cmr5gr11_CAS-III-C	unknown
NC_009767.1|WP_012122672.1|5464243_5464756_+|N-acetyltransferase	unknown	unknown	gnl|CDD|225695
NC_009767.1|WP_083760358.1|5465676_5467803_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|226951

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012122688.1|5478707_5479694_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	3.9e-41	136.1	0.0
NC_009767.1|WP_012122686.1|5477490_5478318_-|hypothetical-protein	cmr3gr5	mkCas0067_cmr3gr5_CAS-III-C	1.6e-90	298.1	0.0
NC_009767.1|WP_012122680.1|5471901_5472561_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	cd09657_cmr1gr7_CAS-III-C	4.8e-20	67.1	0.0
NC_009767.1|WP_012122687.1|5478328_5478718_-|hypothetical-protein	cmr5gr11	mkCas0060_cmr5gr11_CAS-III-C	1.4e-48	159.2	0.4
NC_009767.1|WP_012122690.1|5482490_5483810_-|hypothetical-protein	cmr6gr7	mkCas0142_cmr6gr7_CAS-III-C	2.5e-75	248.0	0.0
NC_009767.1|WP_012122689.1|5479704_5482494_-|CRISPR-associated-protein-Csx11	cas10	cd09701_cas10_CAS-III-C	3.3e-293	970.0	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122686.1|5477490_5478318_-|hypothetical-protein	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	0.00105494
NC_009767.1|WP_012122685.1|5476021_5477134_-|AAA-family-ATPase	gnl|CDD|226984	COG4637, COG4637, Predicted ATPase [General function prediction only].	3.71623e-85
NC_009767.1|WP_012122683.1|5474274_5474733_-|gamma-glutamylcyclotransferase	gnl|CDD|119400	cd06661, GGCT_like, GGCT-like domains, also called AIG2-like family. Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is encoded by the gene C7orf24, and the enzyme participates in the gamma-glutamyl cycle. Hereditary defects in the gamma-glutamyl cycle have been described for some of the genes involved, but not for C7orf24. The synthesis and metabolism of glutathione (L-gamma-glutamyl-L-cysteinylglycine) ties the gamma-glutamyl cycle to numerous cellular processes; glutathione acts as a ubiquitous reducing agent in reductive mechanisms involved in protein and DNA synthesis, transport processes, enzyme activity, and metabolism. AIG2 (avrRpt2-induced gene) is an Arabidopsis protein that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. avrRpt2 is an avirulence gene that can convert virulent strains of P. syringae to avirulence on Arabidopsis thaliana, soybean, and bean. The family also includes bacterial tellurite-resistance proteins (trgB); tellurium (Te) compounds are used in industrial processes and had been used as antimicrobial agents in the past. Some members have been described proteins involved in cation transport (chaC).	1.52266e-31
NC_009767.1|WP_083760360.1|5471338_5471983_-|NYN-domain-containing-protein	gnl|CDD|350237	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains. This N-terminal LabA-like PIN domain is found in a well conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. LabA from Synechococcus elongatus PCC 7942, (which does not contain this C-terminal domain), has been shown to play a role in cyanobacterial circadian timing. The LabA-like C-terminal domains characteristic of this subfamily may be related to the LOTUS domain family (which also co-occurs with LabA-like N-terminal domains). The function of the N-terminal domain is unknown. The LabA-like PIN domain family also includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Other members are the LabA-like PIN domains of human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.37938e-10
NC_009767.1|WP_012122676.1|5469866_5470247_+|response-regulator-transcription-factor	gnl|CDD|381090	cd17535, REC_NarL-like, phosphoacceptor receiver (REC) domain of NarL (Nitrate/Nitrite response regulator L) family response regulators. The NarL family is one of the more abundant families of DNA-binding response regulators (RRs). Members of the NarL family contain a REC domain and a helix-turn-helix (HTH) DNA-binding output domain, with a majority of members containing a LuxR-type HTH domain. They function as transcriptional regulators. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.39881e-37
NC_009767.1|WP_012122684.1|5475350_5476025_-|DUF4276-family-protein	gnl|CDD|379470	pfam14103, DUF4276, Domain of unknown function (DUF4276). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 224 amino acids in length. There is a single completely conserved residue E that may be functionally important.	4.61692e-51
NC_009767.1|WP_012122689.1|5479704_5482494_-|CRISPR-associated-protein-Csx11	gnl|CDD|187832	cd09701, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, inactivated palm domain and Zn-ribbon; signature gene for type III.	0
NC_009767.1|WP_012122678.1|5470546_5471155_+|DUF1211-domain-containing-protein	gnl|CDD|377696	pfam06736, DUF1211, Protein of unknown function (DUF1211). This family represents a conserved region within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. These may possibly be integral membrane proteins.	3.10539e-30
NC_009767.1|WP_012122688.1|5478707_5479694_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl|CDD|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.34669e-35
NC_009767.1|WP_012122690.1|5482490_5483810_-|hypothetical-protein	gnl|CDD|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	7.72975e-11
NC_009767.1|WP_012122675.1|5467729_5468371_-|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.14159e-78
NC_009767.1|WP_012122680.1|5471901_5472561_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	1.73667e-14
NC_009767.1|WP_012122673.1|5464795_5465557_-|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	3.65347e-10
NC_009767.1|WP_012122672.1|5464243_5464756_+|N-acetyltransferase	gnl|CDD|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	5.38595e-53
NC_009767.1|WP_083760358.1|5465676_5467803_-|HAMP-domain-containing-protein	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.21533e-56

Protein sequences

>NC_009767.1|WP_012122681.1|5472682_5472985_-|hypothetical-protein
MRPLKRLRRAKRIPDGLPPNSFVPLLTERREQARVLPAYADAVRKRLLGEVTTPSPENSVVRHRAASTLLRDRLDATAGDHRIRAVIADFNLIDQKPKRT
>NC_009767.1|WP_012122680.1|5471901_5472561_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MGKKWKLEAHTDIWTGDAAGKPDRLIPTGIMGSLRWWFEVLVRGLGGQACDPTSDVRCPDKDGRHCVVCELFGCTGWARKFRLMILDDNGQVIQNQIKANHTFILRFIPLRPIRDEEWCLLDATLRLIAEYGAIGGKTVFKPSDQQNRQNQPHHKDFGLVKIKKRPKWCKKEDVEAYVRNSHWRPNFPDNDFSWASLQNFWCVNGRYLARISVPVSTCL
>NC_009767.1|WP_083760360.1|5471338_5471983_-|NYN-domain-containing-protein
MGFPAKLLVCEWAVSGAYIRPGLDVFVIVSGDGGFAALAKKLHEYGKTVIGCAYRSAVNKTFQAVCDEFVWITDPEEKVQPAHVPDQLGVTDPRNIRLAEQVARVTVPTPENIVAKTREILDWYAQNTTTSVDLVQKGITLSVIKEAVMYAIPDFQPGRLGFAKFIEYMQFVCQGTIYCIVRLPTSQVVLALRCAVPNGSEVLPDLDAHEMECG
>NC_009767.1|WP_012122678.1|5470546_5471155_+|DUF1211-domain-containing-protein
MSEQTRPYCETALGLERIVFFSDAVFAIAITLLALEIRLPEAAGLNDAELWRALASIYPKYLSFMVSFLVIGNFWLVHHRQFGYIERYDTRLILLNLFVLMMIAFIPFPTVVISENGNRAATIFYALTMCATGLLLALLWLYASGTRRLVAPNLPPAIVRRGIIRNLSVSAVFLLSVALAFLNPDLAKFSWLLIAPAVVLAR
>NC_009767.1|WP_012122677.1|5470243_5470540_+|hypothetical-protein
MNTKRTKSGIAGGIFLIGLGILIVTGGWYPGVLFVLGLAIGADRAFRGNYGQAVTALAVCFAIGLLSAVDLPWHIFGPFILISLGAVAVTQGVLSKEG
>NC_009767.1|WP_012122676.1|5469866_5470247_+|response-regulator-transcription-factor
MITILLVDDDPNIRRGLRMNLALEPDFAVVGEAGDGWDALRLARELQPDAVVMDIRLPSLDGLSAAERLRQSQLRCAVIILTLYDEPSNRARARQIGVAAFLSKSASADALKQTLRNITFDKGAQT
>NC_009767.1|WP_012122675.1|5467729_5468371_-|response-regulator-transcription-factor
MSIRILLVDDHAVVRQGLKMFLGLDPDLQVVGEAENGEEAIRLTGELNPDVVLMDLLMPVMDGVTAIARIRRDFPDTEVIALTSVLEDEAVMKAMRAGAMGYLLKDTQAEELRRAIKAAAAGQVQLSPRAAARLMRDVRAPESPEKLTERETDVLRLLALGRANKEIARELNIGEKTVKTHVSAILRKLDVPSRTQAALYAVRIGLVSIEGET
>NC_009767.1|WP_083760358.1|5465676_5467803_-|HAMP-domain-containing-protein
MCRAARKPPYMLCGLGWCLSKGRHRFMVRFNRISAKIAAGVMAFVLLLALVTGALVWRGFHQAEQAAAQRSADSLQTQSRNTLIQLTAQEAQLYDLELQQAARATKIAADFMAQARASGKTPDASAAPNVVYQAAQLTLSDNGLLYYDANPKRRTEILHIGSIPPDEVTDRSLRDSAILEDLFPSLLAQTETGVGIYFQGPQLTFRYYPVRGLPELELQNGAAEAAQTARIEDFLVAPNNNPQRKTVWLPPYLDDAGQGLLVSADTPIYYGDEFQGFIGIDVSLTRLIERLSQLKPTPGSFAFLLDSEGRLIAVPDGRAAALANRPLSAQEQAANGLLGAALTELNTELALALQAAQPPDALEISLNGQPVIVTRASLPNLGWTLSIVVPLAEVTAESQSVARAIEADAIATVRNTLLIMALFFIGAAAVTLWLSQRFLARPMTDMLSGVRAITAGNLDVSVPVTSNDELGELAASFNQMTDELNRRTRELAQTSAELQLKETQVKMAALEERQRLARELHDSVSQALYGIALGARTAQTQLERDPARLGEPLEYILSLAEAGLSEMRALIFELRPESLQTEGLVAALTKQSDALRARHKLDVVTRFDPEPEISLEAKEALYRIAQEAMHNVARHAHATRVELSLLNADGALTLEIRDNGKGFDPAQPYPGHLGLKSMPERAAHIGGAFHIESRPGAGTVITVTVPNG
>NC_009767.1|WP_012122673.1|5464795_5465557_-|CPBP-family-intramembrane-metalloprotease
MQNQVRVSVPSSSQGARAAILSFFESRPVLSAVILFVAFVVLSTLFGLAAQELLPQFQPEFIALIALSVLVAAGLSALGWWKAAGFNFPAEWRDSRLMVIPFLIVLGLPFLMGIKTGDAGTFVYLAVAYALTGFMEEGLMRGIVLRVLKPTGTTRSVVISSLLFGLMHIGNLLYRNPFIVFAQMLGAFVHGIGLSAIRLRANTIWFPVVLHALHDLALKYTNFPAIPLDVVQVTLLMVYGIYLLRGYKEEASE
>NC_009767.1|WP_012122672.1|5464243_5464756_+|N-acetyltransferase
MTILIRPESPADLPAIFHANQLAFGRDNEARLVNKLRDANAVVLSLVAEQDGRVVGHILFSPVTIRDGGTEWQAVGLGPMAVLPEVQKQGVGSALIRAALAELKTLGHDVVIVLGHAEYYPRFGFQPTQPFGIRWEIDVPAEVFMLAELTPGALRGRRGVVRYHPAFAGV
>NC_009767.1|WP_012122683.1|5474274_5474733_-|gamma-glutamylcyclotransferase
MDQWYFAYGSNLSKEQMEERIGSSREARVAWLTGYRLVFNKRSKKDGTGKANIVPAAGATVWGVVYRCSYDDLQKMDKCEGVKGGHYQRHAIRVQLDSGEELDAVTYVAGERFLAAESLKPSTEYLETIITGARQHRLPDDYIRSIEALAGS
>NC_009767.1|WP_012122684.1|5475350_5476025_-|DUF4276-family-protein
MKQVLVYVEGQTEETFVRDVLAPHLFTTCSIFVIPTLARTKRTKSGQTFKGGIVSYGQVKKDLRNLLNTPNVALVTTMIDYYGLPDDFPGISTLPTGTLSERVRALQDAFAMDIGSQRFLPFLVLHEFEALVLTEPEHLADVLPQYKAKLADLQRDINGLPPEEINDGDTTHPAARIRQYFPGYQKRLHGPLLVQKIGIETIRDKCPHFHDWLTRLESLCTQQE
>NC_009767.1|WP_012122685.1|5476021_5477134_-|AAA-family-ATPase
MVERIVVKGYKSIREAEINLRPVNVLIGANGAGKSNFIGLFQFMNRVVNQGMQVYVAQAGGADQLLHYGRKITEQIYLELWFSRPNNLANGYECTLLPTDDDLLVFKEEVVYFHDRNEYDHPYESRRSSQVHHETLLLDWQRNGDRVAYHVLRALASWQLYHFHDTSPSARIKQTGDIHDNLFLRPDASNLAAYLYVLRETEEAYYRNIVDTIRLVAPFFGDFVLRPSPFNPAKIRLEWQERGSDALFGPHVFSDGTLRFICLATLFLQPPERFPATIVLDEPELGLHPYAIAILADMVRSAAEHTQIILATQSVTLVNQFEPDDILVVDRVQGETLFSRLEKEQMASWLEDYGLGDLWEKNLLRGRPAR
>NC_009767.1|WP_157042740.1|5477132_5477300_+|hypothetical-protein
MALLLQRLQTGLGTVLFFLRRILPPRQGTVGVGYANVGVCGNQRTLVTGALGTFS
>NC_009767.1|WP_012122686.1|5477490_5478318_-|hypothetical-protein
MTWQVYHVIVRLRSPLHIGYRKVGNVQRTRPYVTGRALWGALTMRLTRDATAPATGSHAYQQIGDEVHQQLAFTYFYPALQSGNDYQVVWPWDNETLFRPRFLSSYQSTALAYPQHAAAEGMLHEVEYISPHTLDTGQPVYLQGYIFAKTDCTLAWQSALERLHIGGERGYGWGATELVQISPCEDDQLFGGVAQFQQSNNSFTISLPKDGRLLAHTKADNAAIIGNLEPLVGREWRSHGGAGQHIAFTGVCFSPGSVVATAQCFTVKEFGVWEA
>NC_009767.1|WP_012122687.1|5478328_5478718_-|hypothetical-protein
MSNSTERNLDRLAAEYAQNIIKRTKDKKASDIDNTITKALGVLQENGVYACFLYLLAREKENGSVVVEEMLNVLNGLGFGWGKPADKRPEKVLAHVSDKVTADLERLLLAKETLEQMLIYARYGAKARE
>NC_009767.1|WP_012122688.1|5478707_5479694_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MATYQRQQYLLMTIDPVHIGTGGYRLGRVDNSIVREPGTRVPKIPGTSLHGAARSYAAQLYETPEAAGQSQDNVQYPDQNPVCYTFGYIEKTGNGNNVKAYSGVVNIFDAHVLLFPVYSMTGPVWVTTLGRLREAGFTVKHNGAALEPQTSTALLTWDRKDDLNLGWLMVNVAGKAEVTAPNGWQNEQRWQAIANRIVLVNESLFSHVVNSNLEVRTSVAIDPERGAAEEGALFTYEALPRATFLTTEVVLDDYREAFPKDKCGQGKTDKNNPLPGDPWNCPLDVVKAGLRMIEWLGVGGMGTRGFGRLVIVGEPLKQKYGEERGNEQ
>NC_009767.1|WP_012122689.1|5479704_5482494_-|CRISPR-associated-protein-Csx11
MNQLDVLAQHREMLLLAEAIGWLHDYRKCSDEQLKVQASNPQGSALPRNELANRYNQLTGVNLQLSVQSGAQTTTIAQTITNLLDDNTWNNNLLGQYLSRCHNTAHFDKQEPVGGKQAYPGMQISSPFGFERAIPNNLTAKMWALPWASLANYSQTERQTLLSKLGELFTQVGADTRRPINEVDLWSWGLLVGALYKAALASALLLGNPPPARDLRWRLLSVRVNGFDYILNVDRIPDLLAKQELLTDCLNRVRDVLEVTHPVGSEVYRDENGSVFVVPDVSDLLAITDNNGQSLQSIIEQEFAKGTVKSNPCPQLGGELTPHLELEQHPWWGQDPNWPNSSNDELPDISSLLNQRIVSPANVDDVKQHWQNRTADICTVCGLRPQGPSSKAAERNVCDICEARRADRSQRWATSETDRTIWIDEVADTNGRFALIVGQFDLTHWLDGSLLQSLLLIAPHDPQNTNNKPVTSKTPSFSRLRRIWETTRRFWHEVQEEALLKLRDDRRRLKIYLKQPNLGPFHVYDLVVGPTDLSVVWMAGYLLTADNLCYIARQLGAESGIYTSPAAAAIFVEEYLCKQFVKNARQPILRNPDASPSLGRANLVSGIKINQIDYQNNAYATAIPILAEPRSFLMLVPADKSLEVLKQIKAKYECEMGKVRDRLPLHLGCIFAARRTPIRAVLEAGRAMLDREPLLQQWQIKQVDRQPGHVVLQLERSGYSVQWQIPLKMGDGTTDDLWYPYFFLETNGDDSKADASKRLAVKVLMPQSNGKKVDEWIVHAGDLRIGETIYRWSSTFDFEFLDTTARRFEISYDEYGRRPRRTRPFYLEDLDRLEELWCSMTRLTKTQRHQVIRTIEATREAWYGTDDNGQSTTDEVFKQFVADTLAGAAWPKGQAWSTIPAEWREKLIQAGVRGELTDLAELHMEILKE
>NC_009767.1|WP_012122690.1|5482490_5483810_-|hypothetical-protein
MTHDFYARFPFPLVAMTAQSLAVLWLAGETNDLPPGWPDLALLEDPVARFDILAQAMITKHLERARSGTRTQNGGYRLWVEQRAQAFFQQRRAWMQRLGLEPVLPDLTYSPPGSWALHVSFTLRQPYLSRDDQMFHLLDNPLKKERVFKIPYVAASGWKGALRSAMRQLRGYTTLDDEARDTQMVRLFGNVRAAESDFVAGRLTFFPTFFDKARLEVINPHDRTTGVGARGPILLECVPQGAQGDFFLLYVPFGPFGQSDDDRRAGIADDLHAVAEGVRAMLTTYGFGAKTSSGFGAVEEQLAGEGKLVLRAKLAGETAPTVAPSAPQPSELARYLESPTRLHPDLRREDGTLKSEAEYQSFIESQGRKYGKQEKQLYDKAKKWWEQEEQTQAQQTPTPAPEPAPPEPSPVTTFTFRTLSELDDVAQRVATRLREGGAL
>NC_009767.1|WP_012122691.1|5483806_5484511_-|hypothetical-protein
MTTIIHVVTEGATEREVGRVLYKRGILSAKGRPQPPQWRSMGEREGFEQVIQALENELIPTLRASGNQERLLLIFDQEDAATAQDRAHVIGQRLGLQFNPNQHHNNLFEHRDPNLHVMLHVSNASITGIARKDFDGYILMLLQGNGKTNLAQCLARVQIPSNALLTKTEQELPDLMQKNGITWSHAKSWIYAYITVFQYRQSHVWFARDVIENADEQELRSVFAPLIAAWDALL

Crispr_ID: NC_009767_100

• CRISPR_ID: NC_009767_100
• CRISPR_location: 5485359-5485463
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,csm3gr7

Consensus repeat of NC_009767_100

Consensus_repeat	Method
GTGTCGGTGCGGCGGTGGTCGTGTCGGTGG	CRISPRCasFinder

spacers of NC_009767_100

>100.1|5485389|45|NC_009767|CRISPRCasFinder
CTGCGCTGCCCACCTCCTCTGCTTCGGTCGCTGTACCGGTTATTG

CRISPR arrays and Neighbor proteins around NC_009767_100

CRISPR arrays

The CRISPR arrays of NC_009767_100

>merge|NC_009767|100|5485359-5485463|CRISPRCasFinder
GTGTCGGTGCGGCGGTGGTCGTGTCGGTGGCTGCGCTGCCCACCTCCTCTGCTTCGGTCGCTGTACCGGTTATTGGTGTCGGTGCGGCGGTGGTCGTGTCGGTGG

>NC_009767|100|90|5485359-5485463|CRISPRCasFinder
GTGTCGGTGCGGCGGTGGTCGTGTCGGTGG	CTGCGCTGCCCACCTCCTCTGCTTCGGTCGCTGTACCGGTTATTG
GTGTCGGTGCGGCGGTGGTCGTGTCGGTGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122702.1|5496016_5496748_+|SCO1664-family-protein	unknown	unknown	gnl|CDD|274813
NC_009767.1|WP_012122693.1|5486120_5487191_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|273859
NC_009767.1|WP_012122686.1|5477490_5478318_-|hypothetical-protein	cmr3gr5	mkCas0067_cmr3gr5_CAS-III-C	gnl|CDD|377130
NC_009767.1|WP_012122691.1|5483806_5484511_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122685.1|5476021_5477134_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|226984
NC_009767.1|WP_012122683.1|5474274_5474733_-|gamma-glutamylcyclotransferase	unknown	unknown	gnl|CDD|119400
NC_009767.1|WP_083760382.1|5492438_5492648_-|DUF2256-domain-containing-protein	unknown	unknown	gnl|CDD|378353
NC_009767.1|WP_012122697.1|5491581_5492394_-|deoxyribodipyrimidine-photo-lyase	unknown	unknown	gnl|CDD|223492
NC_009767.1|WP_012122684.1|5475350_5476025_-|DUF4276-family-protein	unknown	unknown	gnl|CDD|379470
NC_009767.1|WP_012122689.1|5479704_5482494_-|CRISPR-associated-protein-Csx11	cas10	cd09701_cas10_CAS-III-C	gnl|CDD|187832
NC_009767.1|WP_012122695.1|5489845_5490298_-|hypothetical-protein	unknown	unknown	gnl|CDD|366351
NC_009767.1|WP_012122703.1|5496934_5498338_+|NADP-oxidoreductase	unknown	unknown	gnl|CDD|215457
NC_009767.1|WP_012122688.1|5478707_5479694_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl|CDD|224255
NC_009767.1|WP_012122696.1|5490620_5491574_-|glycerol-acyltransferase	unknown	unknown	gnl|CDD|153248
NC_009767.1|WP_012122690.1|5482490_5483810_-|hypothetical-protein	cmr6gr7	mkCas0142_cmr6gr7_CAS-III-C	gnl|CDD|187857
NC_009767.1|WP_012122699.1|5492719_5494246_-|cryptochrome/photolyase-family-protein	unknown	unknown	gnl|CDD|225588
NC_009767.1|WP_012122687.1|5478328_5478718_-|hypothetical-protein	cmr5gr11	mkCas0060_cmr5gr11_CAS-III-C	unknown
NC_009767.1|WP_157042740.1|5477132_5477300_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122694.1|5488067_5489849_-|alpha-amylase	unknown	unknown	gnl|CDD|200455
NC_009767.1|WP_012122701.1|5495502_5496015_+|DUF3090-family-protein	unknown	unknown	gnl|CDD|213872

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009767.1|WP_012122688.1|5478707_5479694_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	3.9e-41	136.1	0.0
NC_009767.1|WP_012122693.1|5486120_5487191_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	5.5e-26	86.7	2.1
NC_009767.1|WP_012122690.1|5482490_5483810_-|hypothetical-protein	cmr6gr7	mkCas0142_cmr6gr7_CAS-III-C	2.5e-75	248.0	0.0
NC_009767.1|WP_012122686.1|5477490_5478318_-|hypothetical-protein	cmr3gr5	mkCas0067_cmr3gr5_CAS-III-C	1.6e-90	298.1	0.0
NC_009767.1|WP_012122687.1|5478328_5478718_-|hypothetical-protein	cmr5gr11	mkCas0060_cmr5gr11_CAS-III-C	1.4e-48	159.2	0.4
NC_009767.1|WP_012122689.1|5479704_5482494_-|CRISPR-associated-protein-Csx11	cas10	cd09701_cas10_CAS-III-C	3.3e-293	970.0	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122702.1|5496016_5496748_+|SCO1664-family-protein	gnl|CDD|274813	TIGR03843, Phosphatidylinositol_3-_and_4-kinase, conserved hypothetical protein. This model represents a protein family largely restricted to the Actinobacteria (high-GC Gram-positives), although it is also found in the Chloroflexi. Distant similarity to the phosphatidylinositol 3- and 4-kinase is suggested by the matching of some members to pfam00454.	1.28491e-127
NC_009767.1|WP_012122693.1|5486120_5487191_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl|CDD|273859	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents the region of stongest conservation, the N-terminal half, of one such family, represented by TM1795 from Thermotoga maritima. This protein is the first of a set of six genes, mostly from the RAMP superfamily, that we designated the CRISPR-associated RAMP module.	2.20074e-16
NC_009767.1|WP_012122686.1|5477490_5478318_-|hypothetical-protein	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	0.00105494
NC_009767.1|WP_012122685.1|5476021_5477134_-|AAA-family-ATPase	gnl|CDD|226984	COG4637, COG4637, Predicted ATPase [General function prediction only].	3.71623e-85
NC_009767.1|WP_012122683.1|5474274_5474733_-|gamma-glutamylcyclotransferase	gnl|CDD|119400	cd06661, GGCT_like, GGCT-like domains, also called AIG2-like family. Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is encoded by the gene C7orf24, and the enzyme participates in the gamma-glutamyl cycle. Hereditary defects in the gamma-glutamyl cycle have been described for some of the genes involved, but not for C7orf24. The synthesis and metabolism of glutathione (L-gamma-glutamyl-L-cysteinylglycine) ties the gamma-glutamyl cycle to numerous cellular processes; glutathione acts as a ubiquitous reducing agent in reductive mechanisms involved in protein and DNA synthesis, transport processes, enzyme activity, and metabolism. AIG2 (avrRpt2-induced gene) is an Arabidopsis protein that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. avrRpt2 is an avirulence gene that can convert virulent strains of P. syringae to avirulence on Arabidopsis thaliana, soybean, and bean. The family also includes bacterial tellurite-resistance proteins (trgB); tellurium (Te) compounds are used in industrial processes and had been used as antimicrobial agents in the past. Some members have been described proteins involved in cation transport (chaC).	1.52266e-31
NC_009767.1|WP_083760382.1|5492438_5492648_-|DUF2256-domain-containing-protein	gnl|CDD|378353	pfam10013, DUF2256, Uncharacterized protein conserved in bacteria (DUF2256). Members of this family of hypothetical bacterial proteins have no known function.	3.72438e-20
NC_009767.1|WP_012122697.1|5491581_5492394_-|deoxyribodipyrimidine-photo-lyase	gnl|CDD|223492	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair].	6.10088e-53
NC_009767.1|WP_012122684.1|5475350_5476025_-|DUF4276-family-protein	gnl|CDD|379470	pfam14103, DUF4276, Domain of unknown function (DUF4276). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 224 amino acids in length. There is a single completely conserved residue E that may be functionally important.	4.61692e-51
NC_009767.1|WP_012122689.1|5479704_5482494_-|CRISPR-associated-protein-Csx11	gnl|CDD|187832	cd09701, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, inactivated palm domain and Zn-ribbon; signature gene for type III.	0
NC_009767.1|WP_012122695.1|5489845_5490298_-|hypothetical-protein	gnl|CDD|366351	pfam00875, DNA_photolyase, DNA photolyase. This domain binds a light harvesting cofactor.	7.69317e-08
NC_009767.1|WP_012122703.1|5496934_5498338_+|NADP-oxidoreductase	gnl|CDD|215457	PLN02852, PLN02852, ferredoxin-NADP+ reductase.	7.35504e-159
NC_009767.1|WP_012122688.1|5478707_5479694_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl|CDD|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.34669e-35
NC_009767.1|WP_012122696.1|5490620_5491574_-|glycerol-acyltransferase	gnl|CDD|153248	cd07986, LPLAT_ACT14924-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.	2.35584e-14
NC_009767.1|WP_012122690.1|5482490_5483810_-|hypothetical-protein	gnl|CDD|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	7.72975e-11
NC_009767.1|WP_012122699.1|5492719_5494246_-|cryptochrome/photolyase-family-protein	gnl|CDD|225588	COG3046, COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only].	0
NC_009767.1|WP_012122694.1|5488067_5489849_-|alpha-amylase	gnl|CDD|200455	cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes Chloroflexi, Dictyoglomi, and Fusobacteria. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NC_009767.1|WP_012122701.1|5495502_5496015_+|DUF3090-family-protein	gnl|CDD|213872	TIGR03847, TIGR03847, conserved hypothetical protein. The conserved hypothetical protein described here occurs as part of the trio of uncharacterized proteins common in the Actinobacteria.	1.70695e-78

Protein sequences

>NC_009767.1|WP_012122691.1|5483806_5484511_-|hypothetical-protein
MTTIIHVVTEGATEREVGRVLYKRGILSAKGRPQPPQWRSMGEREGFEQVIQALENELIPTLRASGNQERLLLIFDQEDAATAQDRAHVIGQRLGLQFNPNQHHNNLFEHRDPNLHVMLHVSNASITGIARKDFDGYILMLLQGNGKTNLAQCLARVQIPSNALLTKTEQELPDLMQKNGITWSHAKSWIYAYITVFQYRQSHVWFARDVIENADEQELRSVFAPLIAAWDALL
>NC_009767.1|WP_012122690.1|5482490_5483810_-|hypothetical-protein
MTHDFYARFPFPLVAMTAQSLAVLWLAGETNDLPPGWPDLALLEDPVARFDILAQAMITKHLERARSGTRTQNGGYRLWVEQRAQAFFQQRRAWMQRLGLEPVLPDLTYSPPGSWALHVSFTLRQPYLSRDDQMFHLLDNPLKKERVFKIPYVAASGWKGALRSAMRQLRGYTTLDDEARDTQMVRLFGNVRAAESDFVAGRLTFFPTFFDKARLEVINPHDRTTGVGARGPILLECVPQGAQGDFFLLYVPFGPFGQSDDDRRAGIADDLHAVAEGVRAMLTTYGFGAKTSSGFGAVEEQLAGEGKLVLRAKLAGETAPTVAPSAPQPSELARYLESPTRLHPDLRREDGTLKSEAEYQSFIESQGRKYGKQEKQLYDKAKKWWEQEEQTQAQQTPTPAPEPAPPEPSPVTTFTFRTLSELDDVAQRVATRLREGGAL
>NC_009767.1|WP_012122689.1|5479704_5482494_-|CRISPR-associated-protein-Csx11
MNQLDVLAQHREMLLLAEAIGWLHDYRKCSDEQLKVQASNPQGSALPRNELANRYNQLTGVNLQLSVQSGAQTTTIAQTITNLLDDNTWNNNLLGQYLSRCHNTAHFDKQEPVGGKQAYPGMQISSPFGFERAIPNNLTAKMWALPWASLANYSQTERQTLLSKLGELFTQVGADTRRPINEVDLWSWGLLVGALYKAALASALLLGNPPPARDLRWRLLSVRVNGFDYILNVDRIPDLLAKQELLTDCLNRVRDVLEVTHPVGSEVYRDENGSVFVVPDVSDLLAITDNNGQSLQSIIEQEFAKGTVKSNPCPQLGGELTPHLELEQHPWWGQDPNWPNSSNDELPDISSLLNQRIVSPANVDDVKQHWQNRTADICTVCGLRPQGPSSKAAERNVCDICEARRADRSQRWATSETDRTIWIDEVADTNGRFALIVGQFDLTHWLDGSLLQSLLLIAPHDPQNTNNKPVTSKTPSFSRLRRIWETTRRFWHEVQEEALLKLRDDRRRLKIYLKQPNLGPFHVYDLVVGPTDLSVVWMAGYLLTADNLCYIARQLGAESGIYTSPAAAAIFVEEYLCKQFVKNARQPILRNPDASPSLGRANLVSGIKINQIDYQNNAYATAIPILAEPRSFLMLVPADKSLEVLKQIKAKYECEMGKVRDRLPLHLGCIFAARRTPIRAVLEAGRAMLDREPLLQQWQIKQVDRQPGHVVLQLERSGYSVQWQIPLKMGDGTTDDLWYPYFFLETNGDDSKADASKRLAVKVLMPQSNGKKVDEWIVHAGDLRIGETIYRWSSTFDFEFLDTTARRFEISYDEYGRRPRRTRPFYLEDLDRLEELWCSMTRLTKTQRHQVIRTIEATREAWYGTDDNGQSTTDEVFKQFVADTLAGAAWPKGQAWSTIPAEWREKLIQAGVRGELTDLAELHMEILKE
>NC_009767.1|WP_012122688.1|5478707_5479694_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MATYQRQQYLLMTIDPVHIGTGGYRLGRVDNSIVREPGTRVPKIPGTSLHGAARSYAAQLYETPEAAGQSQDNVQYPDQNPVCYTFGYIEKTGNGNNVKAYSGVVNIFDAHVLLFPVYSMTGPVWVTTLGRLREAGFTVKHNGAALEPQTSTALLTWDRKDDLNLGWLMVNVAGKAEVTAPNGWQNEQRWQAIANRIVLVNESLFSHVVNSNLEVRTSVAIDPERGAAEEGALFTYEALPRATFLTTEVVLDDYREAFPKDKCGQGKTDKNNPLPGDPWNCPLDVVKAGLRMIEWLGVGGMGTRGFGRLVIVGEPLKQKYGEERGNEQ
>NC_009767.1|WP_012122687.1|5478328_5478718_-|hypothetical-protein
MSNSTERNLDRLAAEYAQNIIKRTKDKKASDIDNTITKALGVLQENGVYACFLYLLAREKENGSVVVEEMLNVLNGLGFGWGKPADKRPEKVLAHVSDKVTADLERLLLAKETLEQMLIYARYGAKARE
>NC_009767.1|WP_012122686.1|5477490_5478318_-|hypothetical-protein
MTWQVYHVIVRLRSPLHIGYRKVGNVQRTRPYVTGRALWGALTMRLTRDATAPATGSHAYQQIGDEVHQQLAFTYFYPALQSGNDYQVVWPWDNETLFRPRFLSSYQSTALAYPQHAAAEGMLHEVEYISPHTLDTGQPVYLQGYIFAKTDCTLAWQSALERLHIGGERGYGWGATELVQISPCEDDQLFGGVAQFQQSNNSFTISLPKDGRLLAHTKADNAAIIGNLEPLVGREWRSHGGAGQHIAFTGVCFSPGSVVATAQCFTVKEFGVWEA
>NC_009767.1|WP_157042740.1|5477132_5477300_+|hypothetical-protein
MALLLQRLQTGLGTVLFFLRRILPPRQGTVGVGYANVGVCGNQRTLVTGALGTFS
>NC_009767.1|WP_012122685.1|5476021_5477134_-|AAA-family-ATPase
MVERIVVKGYKSIREAEINLRPVNVLIGANGAGKSNFIGLFQFMNRVVNQGMQVYVAQAGGADQLLHYGRKITEQIYLELWFSRPNNLANGYECTLLPTDDDLLVFKEEVVYFHDRNEYDHPYESRRSSQVHHETLLLDWQRNGDRVAYHVLRALASWQLYHFHDTSPSARIKQTGDIHDNLFLRPDASNLAAYLYVLRETEEAYYRNIVDTIRLVAPFFGDFVLRPSPFNPAKIRLEWQERGSDALFGPHVFSDGTLRFICLATLFLQPPERFPATIVLDEPELGLHPYAIAILADMVRSAAEHTQIILATQSVTLVNQFEPDDILVVDRVQGETLFSRLEKEQMASWLEDYGLGDLWEKNLLRGRPAR
>NC_009767.1|WP_012122684.1|5475350_5476025_-|DUF4276-family-protein
MKQVLVYVEGQTEETFVRDVLAPHLFTTCSIFVIPTLARTKRTKSGQTFKGGIVSYGQVKKDLRNLLNTPNVALVTTMIDYYGLPDDFPGISTLPTGTLSERVRALQDAFAMDIGSQRFLPFLVLHEFEALVLTEPEHLADVLPQYKAKLADLQRDINGLPPEEINDGDTTHPAARIRQYFPGYQKRLHGPLLVQKIGIETIRDKCPHFHDWLTRLESLCTQQE
>NC_009767.1|WP_012122683.1|5474274_5474733_-|gamma-glutamylcyclotransferase
MDQWYFAYGSNLSKEQMEERIGSSREARVAWLTGYRLVFNKRSKKDGTGKANIVPAAGATVWGVVYRCSYDDLQKMDKCEGVKGGHYQRHAIRVQLDSGEELDAVTYVAGERFLAAESLKPSTEYLETIITGARQHRLPDDYIRSIEALAGS
>NC_009767.1|WP_012122693.1|5486120_5487191_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MELTISTLTPLWTGGVEPGKVDRIHETGILGSLRWWYEAIVRGLGGTACDPSKGECRFDAEKYQKSTATDERQRLRDAGLCDVCQLFGATGWRRRFRLEVVNDQTAPLWAGNQPLNIRPPGRNRGWFLPPGRMGTFTLRIHGDATSVKHLLALFRFVERWGSLGAKPQLGYGVIAIQNWDAVKNNLNDWSWRQAAQSFGNNSSAPNADLPDLRRFGFFRYRFQPPDKAWWSRIGGFERVVAQVRPFAARTVPVPPVLKNAWRFQHWQPSWEDEHTFWGRVATDRIRGKVAVSWAYPRTNGWEIRGSAWLSGVEPEPVWQLLSNAAIVNQTLGVTGGTMDTMRPQTTDQLLNVLENL
>NC_009767.1|WP_012122694.1|5488067_5489849_-|alpha-amylase
MKARALFLIIVLIIVGCGAPSAAVPPTATPPAAPSATPLSEEAALLATMAANAPSPAEATPTVPLPTLFPTITLGPTAEPRPLPAGWWDTAVCYEIFVRSFYDSDGDGIGDINGLIAKLDYINDGDPTGGSDLGANCIWLMPVAEAASYHGYDVIDYNAIEKDYGTNDDFKRLVAEANRRGIRVIVDLVLNHTSSAHPWFISALNDPASPYRDWYIWSPVDPGYRGPWGQQVWHRSPARNEYYYGVFVAEMPDLNYRNPEVVAEAEKIAAFWLNEMGVDGFRLDAIKHIVENGSEQEGTRETHAWMRSFEAAIERIKPGAFTVGEVFGGRAGSLDAYYPDQLDTYFEFGVAEGILRSANTGAPGPYLTAVEDALMRLPYQRWAPFLTNHDQERVMTVLGGDAGKARVAAIALLTLPGLPFVYYGEEIGMTGAKPDERIRTPMQWTGEPGAGFTTGSPWQAPQSDFPTVNVAAQDTDPDSLLNVYRTLIRLHTTRPALGKGDFTALNATGGAAAFLRRSGDDAALVVINFSANPLSGVTLSTAQSNLDPGAYTPELLFGSGNLSPLIVGANGSISAYALPEIPPQRAVIVGLGR
>NC_009767.1|WP_012122695.1|5489845_5490298_-|hypothetical-protein
MTPQFIRPIVWVHGDCLSPYGPALQAHPGAPAIWVWDDALLEEWRISLKRIVFIYECLLELPVVIRRGDVASEVLAFAREHAADGVATAFSPSPRFRAICDRLRDALPVAVLPVEPFLAYTGRLDLRRFSRYWATAEKYAFGQLPLFDDQ
>NC_009767.1|WP_012122696.1|5490620_5491574_-|glycerol-acyltransferase
MGFYTLRRERDLEQLDALTRLNIEDLIASFKLDHIRRGRRLLELLCWLPARRFAHQILAYEQMVGSGGLHLGASWIVHTFARRLEIYGAECVPHRGPLLVLSNHPGMSDAMALFVALSRPDLKVIAAERKLLHLLPNISRHLVFIPEGESESRGRMSGMRTIAAHLRRGGAALIYPAGRIEPDPLVMPDAIDALANWSESVSLFARLAPEALVLPVAIGGTISAAALRNPIPRLYRKRRDREWAAATLQVLIPAYRPPVVRVVFTEPFQAASLAELGDPPDIMRAITGRVADAMRRMQASQHADRYGYPVAIAIGNE
>NC_009767.1|WP_012122697.1|5491581_5492394_-|deoxyribodipyrimidine-photo-lyase
MSTDMRRDFANRNELIEYLRREFPQAAARCDEVSATRGGRREAETRLRRIDPRRYAATRNYLSGAVTHLSPYIRHGVLSLAEVRDAALSRVRRSADAAKLVSELGWRDYWQRLYERLGDNVWRDQESYKTGYCAGDYAAELPDDIIEGRTGLACIDAFSHELRATGYLHNHARMWLAAYVVHWRRIRWQAGARWFLEHLLDGDPASNNLSWQWVASTFSHKPYIFNRENLERFTDGVYCRTCPLYGRCDFEGTYDALNRRLFPNATGTTG
>NC_009767.1|WP_083760382.1|5492438_5492648_-|DUF2256-domain-containing-protein
MGGGQTGIITAGEEEPVRGVKKQHLPEKICATCGRPFTWRKSLAKNWNDVKYCSDACRKYRRHGRNVHR
>NC_009767.1|WP_012122699.1|5492719_5494246_-|cryptochrome/photolyase-family-protein
MNDTPVTVWILGDQLLRAHPAIEAVEAQAGRRNMRIVLVESDARIAQMPYQRKKIVLILSAMRHYAASLRERGYLVDEVRAPSFVAGLQRHIAQHRSQRLVTMAAAEYETRRFQQDYLSQALGISVEVLPNTQFLTGRRNPFPDVEPSQRVIMERFYRAMRRHFDVLLEPDGSPTGGAWNFDRLNRRPLPRSVAPPPPLTFEPDAITRRVIAEVEARSGGVGTATGFALAVTHAQAEAALADFVAHRLAAFGPYEDAMSAAHDVLFHSMLSPYLNIGLLEPLQIVRTVEEAYRAGAAPIQSVEGFARQIIGWREYIYWQYWRLMPGLRDANAWNATRPLPRFFWSGDTDMRCLRHVIERAIATGYTHHIERLMIVCNFCLLAGIRPSEVNDWFLAHYVDAYDWVMQPNVIGMGLNADGGLTATKPYIASAAYIRKMSDYCDGCRYDPKRRIGPDACPFNTLYWNFLIRHEATLRANPRMGPAVLGLARFDASEREAVTRQAEMVLGEN
>NC_009767.1|WP_012122701.1|5495502_5496015_+|DUF3090-family-protein
MTKFTYDLDPVTRITASAVGPPGQRVFYIQARRGRELVSLIAEKEQVRALAQAIDRLLEELAEKNPLLSSSDDLLLVSDMNLEEPIEPRFRIAQMGIGYDAERDMVILVMQGYREDESEEEPPTARFGASRQQMRALSEHAANVVARGRKICGNCGRPVDPGGHFCPQMN
>NC_009767.1|WP_012122702.1|5496016_5496748_+|SCO1664-family-protein
MSKELSVGEVLALLTNGKMEIQGMMPWSSNYTLLVTVRDGDLEGLAVYKPRRGERPLWDFPRGTLCQREFAAFLLSEALGWSLVPPTVLRDGPYGYGSVQLYIDCDQDAHLFTMQKEGGYDDQLARLAAFDILSNNADRKSGHCLKGTDGRLWAIDHGICFHAEPKLRTVLWDFAGEPICEEIMVDLCALREDVRNGGRFIRALEGLLAPEEVRAFRRRLDRLIETGCYPDPGAARTIPWPPV
>NC_009767.1|WP_012122703.1|5496934_5498338_+|NADP-oxidoreductase
MDAQLGTEGRPVRIAIIGAGPAGFYAAEALLKQPNLVCLIDMFNRFPTPYGLVREGVAPDHQSIKSVTRIYDRIAADPRVRYFGNVTFGTDVTHEDLKQLYDQIVYAVGAPSDRRMGIPGEDLIGSYPATAFVGWYNGHPDYCSMTFDLSHERAVVVGNGNVAIDVARILVTNPDKLAKTDIADYALEALRQSKIREVVMLGRRGPAQAAFTNAEIKELGELDGVDVIVDPADLELDPMSAEHVKTDKSAARNVEILRSYAARAEHHAPRRIRMRFLTSPVELIGENGRVVRVKVERNELVVDQQGGLRAKGIGVYDTIEAGLVLRSVGYRGIPLPGVPFQEGSFIIPNVNGRVIRPRDDEVVLGEYVVGWAKRGPSGVIGTNKPDAAATVAAMVEDLPKLPGIPDKNRDPERIVALLRMRKPDFVTYADWKRLDAYETARGAEQGRPRIKVTTVPEMLEIIHGRNS

Crispr_ID: NC_009767_101

• CRISPR_ID: NC_009767_101
• CRISPR_location: 5636351-5636452
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_101

Consensus_repeat	Method
GCGGCATCCATCGCGTGGAGGTGACATCGTT	CRISPRCasFinder

spacers of NC_009767_101

>101.1|5636382|40|NC_009767|CRISPRCasFinder
ATGAGGAGATGAGCCTTATCGCCGAACGCTTTGACTGCCG

CRISPR arrays and Neighbor proteins around NC_009767_101

CRISPR arrays

The CRISPR arrays of NC_009767_101

>merge|NC_009767|101|5636351-5636452|CRISPRCasFinder
GCGGCATCCATCGCGTGGAGGTGACATCGTTATGAGGAGATGAGCCTTATCGCCGAACGCTTTGACTGCCGGCGGCATCCATCCCGTGGAGGTGACATCGTT

>NC_009767|101|91|5636351-5636452|CRISPRCasFinder
GCGGCATCCATCGCGTGGAGGTGACATCGTT	ATGAGGAGATGAGCCTTATCGCCGAACGCTTTGACTGCCG
GCGGCATCCATCCCGTGGAGGTGACATCGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122828.1|5641244_5642426_+|radical-SAM-protein	unknown	unknown	gnl|CDD|226727
NC_009767.1|WP_012122821.1|5629821_5631393_-|malate-synthase-A	unknown	unknown	gnl|CDD|236432
NC_009767.1|WP_012122823.1|5634986_5635214_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122827.1|5640877_5641039_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_157042746.1|5642557_5642698_-|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_012122822.1|5634449_5634866_+|putative-toxin-antitoxin-system-toxin-component,-PIN-family	unknown	unknown	gnl|CDD|224485
NC_009767.1|WP_083760364.1|5632635_5632950_-|hypothetical-protein	unknown	unknown	gnl|CDD|223406
NC_009767.1|WP_012122826.1|5640512_5640881_-|M48-family-metallopeptidase	unknown	unknown	gnl|CDD|320703
NC_009767.1|WP_012122820.1|5628514_5629801_-|isocitrate-lyase	unknown	unknown	gnl|CDD|237893
NC_009767.1|WP_012122829.1|5642909_5643989_+|heat-inducible-transcription-repressor-HrcA	unknown	unknown	gnl|CDD|273017
NC_009767.1|WP_157042745.1|5627846_5628458_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NC_009767.1|WP_012122830.1|5644019_5644634_+|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl|CDD|366423
NC_009767.1|WP_012122831.1|5644626_5646474_+|molecular-chaperone-DnaK	unknown	unknown	gnl|CDD|234715
NC_009767.1|WP_012122817.1|5625564_5626653_-|hemin-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|238569
NC_009767.1|WP_083760365.1|5635203_5635566_+|PIN-domain-containing-protein	unknown	unknown	gnl|CDD|350320
NC_009767.1|WP_012122818.1|5626633_5627449_-|heme-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|237422
NC_009767.1|WP_012122824.1|5636810_5637677_-|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl|CDD|234823
NC_009767.1|WP_012122825.1|5637821_5640050_-|FdhF/YdeP-family-oxidoreductase	unknown	unknown	gnl|CDD|239168
NC_009767.1|WP_041331295.1|5634235_5634460_+|hypothetical-protein	unknown	unknown	unknown
NC_009767.1|WP_041331301.1|5640127_5640313_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122821.1|5629821_5631393_-|malate-synthase-A	gnl|CDD|236432	PRK09255, PRK09255, malate synthase; Validated.	0
NC_009767.1|WP_012122829.1|5642909_5643989_+|heat-inducible-transcription-repressor-HrcA	gnl|CDD|273017	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA. HrcA represses the class I heat shock operons groE and dnaK; overproduction prevents induction of these operons by heat shock while deletion allows constitutive expression even at low temperatures. In Bacillus subtilis, hrcA is the first gene of the dnaK operon and so is itself a heat shock gene. [Regulatory functions, DNA interactions].	4.57039e-121
NC_009767.1|WP_012122822.1|5634449_5634866_+|putative-toxin-antitoxin-system-toxin-component,-PIN-family	gnl|CDD|224485	COG1569, COG1569, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	2.35503e-27
NC_009767.1|WP_083760364.1|5632635_5632950_-|hypothetical-protein	gnl|CDD|223406	COG0329, DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane].	1.46395e-13
NC_009767.1|WP_012122826.1|5640512_5640881_-|M48-family-metallopeptidase	gnl|CDD|320703	cd07344, M48_yhfN_like, Peptidase M48 YhfN-like, a novel minigluzincin. M48 YhfN-like protease is considered as a CaaX prenyl protease 1 homolog, with most of the sequences in this family as yet uncharacterized. It contains the zinc metalloprotease motif (HEXXH), likely exposed on the cytoplasmic side. It is probably associated with the endoplasmic reticulum (ER), regardless of whether its genes possess the conventional signal motif (KKXX) in the C-terminal. Proteins in this family proteolytically remove the C-terminal three residues of farnesylated proteins. This novel family of related proteins consist of the soluble minimal scaffold similar to the catalytic domains of the integral-membrane metallopeptidase M48 and M56, thus called minigluzincins.	1.15555e-27
NC_009767.1|WP_012122820.1|5628514_5629801_-|isocitrate-lyase	gnl|CDD|237893	PRK15063, PRK15063, isocitrate lyase; Provisional.	0
NC_009767.1|WP_157042745.1|5627846_5628458_-|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.83453e-15
NC_009767.1|WP_012122830.1|5644019_5644634_+|nucleotide-exchange-factor-GrpE	gnl|CDD|366423	pfam01025, GrpE, GrpE.	7.64512e-57
NC_009767.1|WP_012122831.1|5644626_5646474_+|molecular-chaperone-DnaK	gnl|CDD|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NC_009767.1|WP_012122817.1|5625564_5626653_-|hemin-ABC-transporter-substrate-binding-protein	gnl|CDD|238569	cd01149, HutB, Hemin binding protein HutB. These proteins have been shown to function as initial receptors in ABC transport of hemin and hemoproteins in many eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	1.22089e-95
NC_009767.1|WP_083760365.1|5635203_5635566_+|PIN-domain-containing-protein	gnl|CDD|350320	cd18753, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	4.02895e-42
NC_009767.1|WP_012122818.1|5626633_5627449_-|heme-ABC-transporter-ATP-binding-protein	gnl|CDD|237422	PRK13548, hmuV, hemin importer ATP-binding subunit; Provisional.	7.4187e-107
NC_009767.1|WP_012122824.1|5636810_5637677_-|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl|CDD|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	4.66792e-95
NC_009767.1|WP_012122825.1|5637821_5640050_-|FdhF/YdeP-family-oxidoreductase	gnl|CDD|239168	cd02767, MopB_ydeP, The MopB_ydeP CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NC_009767.1|WP_012122828.1|5641244_5642426_+|radical-SAM-protein	gnl|CDD|226727	COG4277, COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only].	2.18398e-106

Protein sequences

>NC_009767.1|WP_083760365.1|5635203_5635566_+|PIN-domain-containing-protein
MSGKYLLDTSVIIALFADDAAVKDNLAKADEIFIPCITVGELYYGAWRSARIRENVARIDEFAAANVVLECNSGTARRYGEIKNALREKGRPIPENDTELLSACCCASTSGFGNPRGMVR
>NC_009767.1|WP_012122823.1|5634986_5635214_+|hypothetical-protein
MSTMVIDEILDQLKFLPYELQWRVLEFTRALALSVPRGVPGHRLLRFAGAIPLDDVQRMRQAIEQGCEQVDVNEW
>NC_009767.1|WP_012122822.1|5634449_5634866_+|putative-toxin-antitoxin-system-toxin-component,-PIN-family
MANEPRFVFDTNVVISALLLRHSVARQAFDRATRTGKLLVSGMTIEELNAVLRRKGFERYVTEEERMEFLSAFVGDGVLVEIVERVVACRDPKDDKFLELAINGKATCIVSGDEDLLILHPFRGIAIVTPRQFLEHPI
>NC_009767.1|WP_041331295.1|5634235_5634460_+|hypothetical-protein
MNTVITIPLDADTARLYSQAPADLRRKFQLLLNLWLRDLIISPRPLQAIMDEISQKAQERGLTPEILESLLNGE
>NC_009767.1|WP_083760364.1|5632635_5632950_-|hypothetical-protein
MAKERTDGCRLPTRTGDACPTADLRAHVAWLIDHSVHGLMPAGAAGKGPLPTTSECRQILEVVVDAAAGRVIVFAHIGAIATRGAAARRPRRWRPPPFARPTRR
>NC_009767.1|WP_012122821.1|5629821_5631393_-|malate-synthase-A
MDTPQRVEILGSTRPEWSEILSVEALDFIAALARQFEHRRRALLAAREQRWADIRGGALPDFLSETAEIRGSDWKVASIPADFSNRRVEITGPTDRRMVINALNSGAQVFMADFEDANAPTWENMVQGQLNLRDAVRRTITFVSPEGREYRLNDTIATLAVRPRGWHLIEKHVHVDGEPVAGAFFDFGLYFFHNARELIRRGSGPYFYLPKMQSHLEARLWNDVFNFAQDRLGIPRGTIRATVLIEHILAVFEMEEILYELREHSSGLNLGRWDYIYSFIKTFNHRSDWIFPDRAQVTMTTHFLRSAAELLVYSCHRRGAHALGGMSAFIPNRREPEITERALAQVRADKEREAKQGFDGAWVAHPDLVPTVLEVFSAAYEGDHQIHYVPQVHVTAADLLTIPQGTITEAGLRNNITVALQYIEAWLGGRGAVAIFNLMEDVATAEIARSQLWQWVRYNARLDDGRTIDETMYKTMRDEELHTLVAARTGDHHFALAAELLDELTLSRDFVEFLTIPGYRRLD
>NC_009767.1|WP_012122820.1|5628514_5629801_-|isocitrate-lyase
MAGLHRDRDIAELEQRWATDPRWQGIRRDYSAADVVRLRGTLKVEYTLASVGARRLWDLLQNEPYVATFGALTGAQATQMVRAGLKAIYMSGWQVAADANLAGQTYPDQSLYPSNSVPALVRRINNALMRADQIHASEGKNDIYWYAPIVADAEAGFGGPLHAFELTKAMIEAGAAGVHFEDQLASEKKCGHLGGKVLVPTSQFVRTLTAARLAADVLDVPTVLIARTDAQAATLLLSDADEYDRPFITGERTPEGFYRVKSGLDAAIARGLAYAPYADLIWCETAHPDLDEARRFAEGIHAKFPGKMLAYNCSPSFNWKRNLDDATIAAFQRELAAMGYKFQFITLAGWHMINYHAFELAKAYAAEGMTAYVKLQQAEFAAEQEGYTATRHQREVGTGYFDEVSTIISGGLSSTTALAGSTEEEQFH
>NC_009767.1|WP_157042745.1|5627846_5628458_-|GNAT-family-N-acetyltransferase
MARVRGRGTGLRPAPLMARVRGRRGRGGRGAGLRPAPPGIRPFTACDLEALLPLVEALHAGDGDPFDPQRTCAALRMLLDYPEYGAVHVAAINDDIVGYIVGSLGLSIEAGGRFLLIDELYVTPAWRGRGLARALLASLLPYAHAHGCRVVELEVGWENDRARTWYERLGFERHRRFFCSTTLETLSRRLATRVGDHSLPQQM
>NC_009767.1|WP_012122818.1|5626633_5627449_-|heme-ABC-transporter-ATP-binding-protein
MIEAHALKYHADDRCLIDGVSLTVNAGDVVAIAGPNGAGKSTLLNLLAGDLRPTTGRILLDGVPLDRLRAGDLALRRAVLRQRVSVTLPFTTFEVALMGRAPHLRGRAEGLADIAITQDALAQTDMAPFAQRLFPTLSGGEQTRASIARVLVQQAPLLLLDEPTAALDLCHQHAALRLARAIARTGGAAIIVLHDLNLAAAYADRIGILYQGRLVAMGAPWDVLRPDLLSEVYRVPVSVVPHPYTGAPLLLTIPDSLTSDRQGGMYDVQPS
>NC_009767.1|WP_012122817.1|5625564_5626653_-|hemin-ABC-transporter-substrate-binding-protein
MTSSHHERHAASVGRLRRMLLGFSLAVVALLAACGTPSPSGVIPPAATRVPASSSLPTPASTSVPGIVESVPGEAEPQLPATVVDYQGEQVTITSIERIVSLNGDVTEIIFALGMGDHVVGVDSSATFPPERTKMLPNIGYQRRLSAEGILALNPTLVIGDEAAGPPETLAQIRTAGVPVAITADPPTLDAPVQKIRFVAQALGIPQRGERLAAQVEAEIARARDLASRITNPPHVLFLYLRGTDVQQVAGSKTPVNVMITAAGGLNAGAEAGIVEFKPLSPEVVIAAQPDVILVLEKGLESVGGVDGLLTIPGLADTPAGKQRRIIAFDDLYLLGMGPRTGQALADLAIALYETSSQEKHP
>NC_009767.1|WP_012122824.1|5636810_5637677_-|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MLTQPNVQRRTVIRVRDGQLTRDRDTLVVEEPLEIRLALHTADGVHLIPLTTTLRTPGADVELAAGFLFSEGVVRERNDIATIRACTDPDIDEEEARFNTLTVDLRPGAQPDLTRARRLFYVSSSCGVCGKASLDALRTRGCVPLPDDDGVRISLSVLAGMDAALRRAQALFHKTGGLHAAALFAVDGALLALHEDIGRHNAVDKLIGAHLLQGRLAALTRSILLVSGRAGFEIVQKALMARIPIVAAVGAPSTLAVTLAQQFNMTLIGFLRGASCNVYAGEQRISIE
>NC_009767.1|WP_012122825.1|5637821_5640050_-|FdhF/YdeP-family-oxidoreductase
MKLRGFNPATWVSLVPNGLGHVKPNHYGEIVRTIWENRDNLGAAWRILRDGVCDGCALGTTGLRDFTMDGIHLCTVRLNLLRLNTMPPLDIRRLDDVAGLRALNGRQLRALGRLPFPMIRRRGDAGFRRITWDQALDLIADRIRATDPQRVAFYLTSRGLTNETYYVAQKAARFLGTNNVDNAARLCHAPSTTAMKQTLGVAASTCSYRDWIGADALVFIGSDTPNNQPVTTRYLYYAKQQGTRIFVVNPYREPGLERYWVPSVFESALFGTRLADRFFQIHTGGDIAFLNGTLRHLIENDWIDHAFVAAHTSGFAQVKAHLETQSWDLLERASGASREDMRAFAAILAQAKSAVFVWSMGVTQHEYGVENVKAILNLALARGFIGREFCGVMPIRGHSGVQGGGEMGCTATTFPGGRPVNEEQAHWLSAQWGFDVPAWKGLTCGDMLDAAHAGEIDVFYAAGGNFLDTLPDPEYIRAALARPSLRVHQDIILTSQMLVDPADTVILLPAATRYEQRDGGTETSTEREIIFSPSIVPPPAEARSEWEIFMQLAERVAPERAHLIHFESGQRIRDEIARIVPEYDGIQHLRRAGDHVQWGGRILCRDGAFATPDGRAVMTPLTPPDASLPEGAFLLRTRRGKQFNSLIHGERDPLNGARRDDVLINPDDAAALGVREGDLVVIRSETGAMQARVKYAPMKPRNVQVHWPEGNVLIAPNRRDAGSGVPAYKAIVTVQRWDCEEK
>NC_009767.1|WP_041331301.1|5640127_5640313_-|hypothetical-protein
MLPVGDALLAWSKAAPLRPAAQPAPAFDDMAPWWWRLPLHAVSLTLMAPIWLPLRGSFSQR
>NC_009767.1|WP_012122826.1|5640512_5640881_-|M48-family-metallopeptidase
MRKAASPQWLPLEQAVPLDVFRAEVEAWARTLGVTPREVRFRPMKRKWASCSSRGRLTFDTDLLRQPAEFRREVIVHELLHLKVPNHGKLFKALLNAYLASAETASFAEEEKPFVNGIIGKD
>NC_009767.1|WP_012122827.1|5640877_5641039_-|hypothetical-protein
MERAFADFPHWISSPRQESELRKVLYKAMLDAGVSDVVAWADAILNLLRRAVQ
>NC_009767.1|WP_012122828.1|5641244_5642426_+|radical-SAM-protein
MDLDEKLAILAPAARFDACDRFLGKRRAPPPATGWNDDAVVADADSDGRALPVFRLLLSNRCEWNCAYCPLRSGNDMPRAALNPNELARVVLPRVERKTVQGLLISTGVDGSPSVATERLLDAVEALRARHGYTGYVHLKLPPGAPAADIERAARLADRISLNLEAPTAMHLARISPERDWLRDLIAPLALARDWSRTGAIRAGLATQFVVGAAGESDHDLLVTTTWLYRDLGLRRVYFGAFRPVAGTPLEQRAPTPFVREQRLREADWLVRRYGFDQRELPYDAAGNLPLHIDPKLAWALAHPERFPVELNSADRDELLRVPGLGPVSVARILRLRREGRFREPAHLAALGGALARARDFVTLDGRFFGRNERDRLRHYARQSEIAEQLTLW
>NC_009767.1|WP_157042746.1|5642557_5642698_-|hypothetical-protein
MESLVVIIVAALAVYMVFKIVAGILRFIISLAIVGVVIFLLVQFLS
>NC_009767.1|WP_012122829.1|5642909_5643989_+|heat-inducible-transcription-repressor-HrcA
MTTDLTDRRQLILKLAIQEFIESSQPVASELLVRKYRLNVSPATVRNELAALEELGYLTHLHTSAGRVPTDAGYRYFVENLMDRTPLSATEQRTIRHQFYQVRSELDQWIQLAGAVLARTAQNASVVTPPRAQQARLKHLELISIHDTTALMVLVLHDGTIRQQTLTLDMALSQEELSRRASRINERCADAPVERVEEFLKQERAHEPPGGDALACQVLDLIVKAMHQFNEHLNSDIHSDGLIEILNQPEFSQVERVRRMIEILQSRRALGTLIPRALSSSGVQVVIGGEHSYDEMREYSVVLSRYGGGEIVGVLGVIGPTRMAYPRAISAVRYISAVMSDLLAELYGIEGDTHWEVES
>NC_009767.1|WP_012122830.1|5644019_5644634_+|nucleotide-exchange-factor-GrpE
MSDELQPVPHPEQPETPPDGQEVVATETPATESGAPPSVDDLQARIAELERENAELRDNWLRAVADYKNFKRRTEQERADLIRNASAALLLKLLPVMDDLERAMANVTPDIAETPWYNGFKLIPQKLQTILESEGVSPMQTVGEAFDPNRHEAIIYEPSEDGEDGRVIAELQRGYLLRDRVLRPAMVKVSQGRKQPSGSETTHE
>NC_009767.1|WP_012122831.1|5644626_5646474_+|molecular-chaperone-DnaK
MSKIIGIDLGTTNSVVAVMEGGEPVVIANAEGSRLTPSVVAVNKAGERLVGQTARRQAVVNPEHTIFSVKRFIGRKLSDPAVQKSRALAPYRLVEAPNGDAWVHMGGRDYSPQEISAFVLQKLKADAEAHLGEPVTQAVITVPAYFNDSQRQATRDAGRIAGLEVVRIINEPTASALAYGLDQNTHNHVIAVYDLGGGTFDISILELGDGVFEVKATNGDTHLGGDDFDQRIIEWMAAAFQQEHGIDLRADRAALQRMKEAAERAKQELSTVVQTEISLPFITADSSGPLHLHMTLTRARLEQLTADLIERTIGPMRQALADAGMRPNDIDAVVLVGGQTRMPAVQEMVRRFFNREPHRGVNPDEVVAIGAAIQAGVLAGEVGHVVLLDVTPLTLGIETLGGVMTPLIERNTTIPTRKSQVFSTASDNQSSVEIHVLQGERVEARANKSLGRFVLDGIPPAPRGVPQIEVTFDIDANGILNVSAADMRTGAAQRITITASSGLSEDEIQRMIAEAEQYAEEDRRRRELIAARNAADSAIYQAERLLRETGEAIDEAVQAQVRDRIAAARLAAEGDDTNEIRNRIAELTVAVQQAVRTTNTRSAAGGDADRENDMR

Crispr_ID: NC_009767_102

• CRISPR_ID: NC_009767_102
• CRISPR_location: 5675546-5675637
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009767_102

Consensus_repeat	Method
CCTTAAACACACGGAGGTGGGGGG	CRISPRCasFinder

spacers of NC_009767_102

>102.1|5675570|44|NC_009767|CRISPRCasFinder
GAAGAGGGTCCAAAAACGCGGCGCACAGCGATGGGCTTATGTCG

CRISPR arrays and Neighbor proteins around NC_009767_102

CRISPR arrays

The CRISPR arrays of NC_009767_102

>merge|NC_009767|102|5675546-5675637|CRISPRCasFinder
CCTTAAACACACGGAGGTGGGGGGGAAGAGGGTCCAAAAACGCGGCGCACAGCGATGGGCTTATGTCGCCTTAAACACACGGAGGTGGGGGG

>NC_009767|102|92|5675546-5675637|CRISPRCasFinder
CCTTAAACACACGGAGGTGGGGGG	GAAGAGGGTCCAAAAACGCGGCGCACAGCGATGGGCTTATGTCG
CCTTAAACACACGGAGGTGGGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009767.1|WP_012122851.1|5668169_5669552_+|metallophosphoesterase	unknown	unknown	gnl|CDD|277343
NC_009767.1|WP_012122853.1|5670213_5670999_+|hypothetical-protein	unknown	unknown	gnl|CDD|225528
NC_009767.1|WP_012122846.1|5660361_5662068_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213192
NC_009767.1|WP_012122852.1|5669718_5670084_+|hypothetical-protein	unknown	unknown	gnl|CDD|225391
NC_009767.1|WP_012122855.1|5673060_5675346_+|TRAP-transporter-fused-permease-subunit	unknown	unknown	gnl|CDD|273983
NC_009767.1|WP_012122860.1|5686363_5687617_-|DUF418-domain-containing-protein	unknown	unknown	gnl|CDD|225193
NC_009767.1|WP_012122859.1|5684674_5685646_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381316
NC_009767.1|WP_012122861.1|5688341_5691509_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|226415
NC_009767.1|WP_012122847.1|5662149_5663232_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009767.1|WP_012122850.1|5667526_5668165_+|phosphoribosylanthranilate-isomerase	unknown	unknown	gnl|CDD|238237
NC_009767.1|WP_012122858.1|5682247_5683552_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NC_009767.1|WP_012122848.1|5663228_5664692_+|deoxyribodipyrimidine-photo-lyase	unknown	unknown	gnl|CDD|223492
NC_009767.1|WP_012122863.1|5692163_5694242_-|hydantoinase/oxoprolinase-family-protein	unknown	unknown	gnl|CDD|223223
NC_009767.1|WP_012122849.1|5665140_5667504_+|NYN-domain-containing-protein	unknown	unknown	gnl|CDD|350237
NC_009767.1|WP_012122856.1|5676479_5679611_-|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl|CDD|234734
NC_009767.1|WP_012122854.1|5671756_5672803_+|TAXI-family-TRAP-transporter-solute-binding-subunit	unknown	unknown	gnl|CDD|270287
NC_009767.1|WP_012122857.1|5680113_5681841_+|DDE-transposase	unknown	unknown	gnl|CDD|372705
NC_009767.1|WP_012122864.1|5694241_5696104_-|hypothetical-protein	unknown	unknown	gnl|CDD|223893
NC_009767.1|WP_012122865.1|5696450_5697146_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009767.1|WP_012122862.1|5691649_5692216_+|YceI-family-protein	unknown	unknown	gnl|CDD|377274

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009767.1|WP_012122851.1|5668169_5669552_+|metallophosphoesterase	gnl|CDD|277343	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	3.28165e-17
NC_009767.1|WP_012122853.1|5670213_5670999_+|hypothetical-protein	gnl|CDD|225528	COG2981, CysZ, Uncharacterized protein involved in cysteine biosynthesis [Amino acid transport and metabolism].	6.67014e-43
NC_009767.1|WP_012122846.1|5660361_5662068_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	8.34984e-84
NC_009767.1|WP_012122852.1|5669718_5670084_+|hypothetical-protein	gnl|CDD|225391	COG2835, COG2835, Uncharacterized conserved protein [Function unknown].	5.5802e-09
NC_009767.1|WP_012122855.1|5673060_5675346_+|TRAP-transporter-fused-permease-subunit	gnl|CDD|273983	TIGR02123, conserved_inner_membrane_protein, TRAP transporter, 4TM/12TM fusion protein. In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria. [Transport and binding proteins, Unknown substrate].	1.39694e-138
NC_009767.1|WP_012122860.1|5686363_5687617_-|DUF418-domain-containing-protein	gnl|CDD|225193	COG2311, COG2311, Predicted membrane protein [Function unknown].	6.76699e-81
NC_009767.1|WP_012122859.1|5684674_5685646_-|aldo/keto-reductase	gnl|CDD|381316	cd19090, AKR_AKR15A-like, AKR15A family of aldo-keto reductase and similar proteins. The AKR15 family includes Microbacterium luteolum pyridoxal 4-dehydrogenase (PLD), Pseudomonas sp. D-threo-aldose 1-dehydrogenase (FDH) and similar proteins. PLD (EC1.1.1.107) catalyzes irreversible oxidation of pyridoxal. FDH (EC1.1.1.122), also called (2S,3R)-aldose dehydrogenase, or L-fucose dehydrogenase, catalyzes the oxidation of L-fucose to L-fuconolactone in the presence of NADP(+). It is also active against L-galactose and, to a much lesser degree, D-arabinose. FDH (EC1.1.1.122), also called (2S,3R)-aldose dehydrogenase, or L-fucose dehydrogenase, catalyzes the oxidation of L-fucose to L-fuconolactone in the presence of NADP(+). It is also active against L-galactose and, to a much lesser degree, D-arabinose. The family also includes L-galactose dehydrogenase (L-galDH) and D-arabinose 1-dehydrogenase (ARA2). L-galDH (EC 1.1.1.316), also called L-galactose 1-dehydrogenase, catalyzes the oxidation of L-galactose to L-galactono-1,4-lactone in the presence of NAD(+). It uses NAD(+) as a hydrogen acceptor much more efficiently than NADP(+). ARA2 (EC1.1.1.116), also called NAD(+)-specific D-arabinose dehydrogenase, catalyzes the the oxidation of D-arabinose to D-arabinono-1,4-lactone in the presence of NAD(+).	3.78981e-117
NC_009767.1|WP_012122861.1|5688341_5691509_+|AAA-family-ATPase	gnl|CDD|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	4.02036e-40
NC_009767.1|WP_012122847.1|5662149_5663232_+|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	6.58175e-20
NC_009767.1|WP_012122850.1|5667526_5668165_+|phosphoribosylanthranilate-isomerase	gnl|CDD|238237	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP). Most PRAIs are monomeric, monofunctional and thermolabile, but in some thermophile organisms PRAI is dimeric for reasons of stability and in others it is fused to other components of the tryptophan biosynthesis pathway to form multifunctional enzymes.	2.25531e-73
NC_009767.1|WP_012122858.1|5682247_5683552_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.34166e-22
NC_009767.1|WP_012122848.1|5663228_5664692_+|deoxyribodipyrimidine-photo-lyase	gnl|CDD|223492	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair].	1.51076e-177
NC_009767.1|WP_012122863.1|5692163_5694242_-|hydantoinase/oxoprolinase-family-protein	gnl|CDD|223223	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	0
NC_009767.1|WP_012122849.1|5665140_5667504_+|NYN-domain-containing-protein	gnl|CDD|350237	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains. This N-terminal LabA-like PIN domain is found in a well conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. LabA from Synechococcus elongatus PCC 7942, (which does not contain this C-terminal domain), has been shown to play a role in cyanobacterial circadian timing. The LabA-like C-terminal domains characteristic of this subfamily may be related to the LOTUS domain family (which also co-occurs with LabA-like N-terminal domains). The function of the N-terminal domain is unknown. The LabA-like PIN domain family also includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Other members are the LabA-like PIN domains of human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.74121e-40
NC_009767.1|WP_012122856.1|5676479_5679611_-|excinuclease-ABC-subunit-UvrA	gnl|CDD|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NC_009767.1|WP_012122854.1|5671756_5672803_+|TAXI-family-TRAP-transporter-solute-binding-subunit	gnl|CDD|270287	cd13569, PBP2_TAXI_TRAP_like_1, Substrate binding domain of putative TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This subgroup includes uncharacterized periplasmic binding proteins that are related to Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family. TRAP transporters are comprised of an SBP (substrate-binding protein) and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function.	4.97122e-125
NC_009767.1|WP_012122857.1|5680113_5681841_+|DDE-transposase	gnl|CDD|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	1.83522e-06
NC_009767.1|WP_012122864.1|5694241_5696104_-|hypothetical-protein	gnl|CDD|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	2.32961e-07
NC_009767.1|WP_012122865.1|5696450_5697146_-|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.45524e-64
NC_009767.1|WP_012122862.1|5691649_5692216_+|YceI-family-protein	gnl|CDD|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	1.23005e-67

Protein sequences

>NC_009767.1|WP_012122855.1|5673060_5675346_+|TRAP-transporter-fused-permease-subunit
MSIAANAQNNDAPDEEVISREKVEQLIEEFENEAATRKLSGAWAWIAGIVAAALSIYALYWTQAIITTQVYRATFLMLVLALTFFYFPLRKAARTKVPWYDVVLAALGAASMIYLSLNFRDALQRVTQPTPTELVMGAIMLLLVLEATRRTTGMALTLVAVFSILYALFGYVFPEPFDHRGISLQRLIGTNYLTLQGVFGVPLDVAATFIVLFTIYGAVLEYSGAGKFFIDWSFAALGKSKSGAGPGRTVAAAGFLLGTVSGSGVATTVTLGSLSWPMLRKAGYDKTVAAGMLAASGIGATLSPPTLGAAAFLIAEYLDISYLDVLIMAIVPTILYYLSIILMIEADSRRMKTQAVTFESESLWELTRKFGYHFSSLFAVAILMGFGMTPFMAVYWSIVVAFFLSFLRPETRLSSLKALASGVALMALLMALEVTGVLPRMRPSVAIFWGLMLTVVIAAAMALYRRVRAIPGEDENMRILRALEYGGRSVVSIAATTACAGIIVSAVTLTGLGLKISGMIVSLGGGNILMTVFFAAIAVWVLGLAVPVTASYILAAVMIVPALRQVGVPEPAAHMFIFYYAVLADVSPPTALAPMAAAAITGGRPWPTMFMAWKYCLPGFLVPFMFTMTTDGTSLLLLLQQVGKDVGTVTLAFKPAWYEALAAGGWMTIVVTFLTSCLAVGALAVAFGGWLLRQANLFERVLMGVAGLAMLYADLGADAVGFGLFIVGVLVHVVRVRQMRKAESVAVAAVETDTFSERSVG
>NC_009767.1|WP_012122854.1|5671756_5672803_+|TAXI-family-TRAP-transporter-solute-binding-subunit
MVKRTLVVFWSIMALVLAACGQPTPAAPTTAPSAPTTAPSGEQPTTAPAAPSGEKLRLIIGTGGTGGVFFPYGGGLARILTEKMPNTEATAQETGGSVDNMKLLQNSEAQIGFTTADSAYDGINGVAAYQATGPVPAATIAVLYQSFIHVVARADSGITSVADMKGRPVSIGSAGSSTETAAIRLLEAAGLKPEDVVRENLGVADSVAAMKDKKIDAFFWIGGLPTAAVTDLVTTESVVFIDTSSLLKPMVDKYGPIYAATVLPGGTYKGTDQDVPGIGVANLLVVREDMPADQVKGILTTIFDNLEEVHQIHPAARTLSLESAVTGSSIPFHPAAIEFYKERGVWKE
>NC_009767.1|WP_012122853.1|5670213_5670999_+|hypothetical-protein
MQKFLTGASYPLRALGVLRRHPTLWQYIIVPVFLNIFVGITLYAGLLVAGFRAIDGVIAGLPEWLAFIAWLLRALLIVVLLIATGYVLVRFGVVIGSPFYSRLSERLEERFSGVVFDAPPPTVGNVARDIARALLFEIKKLILALTIGAPTLLLNLIPFVGSLLATAGGIALSATISCLDFFDPPLERRRLRFRDKLGFVRQGLPATAGFGLVCLGLVSIPLINLLAVPLCITAGTLFYCDRHGSEHALSGNGSSPQAGSN
>NC_009767.1|WP_012122852.1|5669718_5670084_+|hypothetical-protein
MKIVLRLLGVAALIALGIVIYRAVRQYREDSVFDLGSGTQSSPPSSSSSGGESRSISPELLAILADPGDKGPVELMRDSEGKEWLVNRRNGYRYPVEDGIPIMLLEEGEKNRDESLIIRQE
>NC_009767.1|WP_012122851.1|5668169_5669552_+|metallophosphoesterase
MLSTLRSLPLAFIGACVALIVRRRLHPVRLRPTGETTPPIGPNDIRPGIRRLVLSDLHMGAGDRRDDFSADAELAALLRYYAAEPTPTELILAGDTFEFLQVCLPDVPDREWSPRAAARRLEAILNAHAEPVAALRAFLSRRDNQVTVIIGNHDFELHYASAKQTLRRALGLAPGNPRLRFGVSYEGDGIFLVHGNQFDRWNRFIHFNGICEPFEVVFGTRLIREAINVLEDEPVDIATLIDNIKPLSAIFWYALSLPTLRNQSTRRLVVRGLVLLVNVLLRNTVYILDDDPQQQTPRSLWKPMYRQVALAATLLGRAAGVRQRSGGFPETVFQRAAEHQLRRSIRAFGSTSVHSMARIARDPQQWSTHLFICGHTHLAQVVALNERQTYVNTGTWTDVILDVATSQRQQQRFPYLEVTYPAQGSPPHWRLLVWREAGESPSPWRDERATTMLEKVEYPV
>NC_009767.1|WP_012122850.1|5667526_5668165_+|phosphoribosylanthranilate-isomerase
MIIKICGVRARDHALTAVDAGADMLGLVFAPSRRQITVEDAASIAEAARFAARGRGRAITLIGVFVNETVERIRDIASSCGLDGVQLSGDEPVIYADALAPLLVIKAVRFDDSAQERAWLIHDQAHVQLLVDARVPGNYGGAGVVADWERAAELARRRSLMLAGGLTPENVADAITRVRPWGVDVSSGVESNGVKDHGKIRAFIAAARAAAR
>NC_009767.1|WP_012122849.1|5665140_5667504_+|NYN-domain-containing-protein
MATDNPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAYADWYRYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMKTLYTNPNIGKFVLATGDRDFIPLVNAIRQHGKEVIIIGVGGAASGHLAQSADEFIFYEQLLGKKPQPLQADAPRIRMPERGRDVEEVVEPAPSVRMRQEAQSAEHTPPPEPPAPETAREETDIYDMLVRAVHLARERGYVCSFGSLKLVMKELMGGEFKESKYRDSTGKPFAKFKDFALEAERRGKVQVFTSGAVVEVFLPGEDPYKLSQFAQDLKEEPPVSTSTTPVHVDAHIDGRPVSSSRRRRRRRSSTTRTTISPDTITAPSQDEFVVHEDVTDELMTEALHDVMNGESAATDVVFEELLDRLEAERERQEALASFDVPIDEPMLDELPDLEEEPDVTISGDSLVEEPILAAPEPDDQMMIMDRPVELSEPFATPETPVGEPTAHLPETPPFTDAEWQMLREVVVSAGRPLSFAQIHDLMRGARNNAGIVRTNEELRSLIKQAINTGVLRRSGKGARVVYHLAPYETSAATEGVDASAVKASEEAASEPSIIRDAVETMVVSEASAPAPALESPEIVAAEPLAAADVLPADVTDEMPQGKVPEETETAAEPEVLAPAPDAVEEGVVAHGVESPPVVAEGSVMAEETPRETSVTVGVPAEAPVTAVDDHATAESKVVDQPTPRRRRTTVRTNAEADQTTAEARPTRSRSKAAVTAPTEEAPRPTRRRKKVETTEEPTEV
>NC_009767.1|WP_012122848.1|5663228_5664692_+|deoxyribodipyrimidine-photo-lyase
MIWIHWFRRDLRLHDNPALHTASIRSDGRVIPLFILDDAILHAPRTGAARIAFMIAALRDLDANLRARGSRLVIRRGRTLDVIRAMVQETGATGVAWNRDYTPFARRRDAQVEAALRDLNVETSIAEDAVVFSPDDVRTGDGRPYTVYTPYRRRWRALTEQRRAEVLRAIEPPLLRPAPEAVADQTVPDHADLGIVVSQRIPPGGETHGAARLAAFVDLAAAHSIAGYAEGRDLLAEPATSRLSPYLRFGCVAPRQALRAALRLLDIVGDDHRTVRSIETWIGELAWRDFYYQILWHYPHVVRRSFKPQYDALAWENDPALFDAWKEGRTGYPIIDAAMHQLRQEAWMHNRARMIVASFLTKDLLIDWRWGERYFMQQLVDGDHAANNGGWQWSAGTGTDAQPYFRIFNPVSQGQKFDPKGLYVRRYLPELAQVPDRYIHAPWTMPRAEQQRCGVVIGRDYPAPIVDHAERRMRALALYRAVSSVAL
>NC_009767.1|WP_012122847.1|5662149_5663232_+|tetratricopeptide-repeat-protein
MTMPSDPTIPAPPQTGRTPTERIREEPIGLWAQLLTAFRDLSGAFDAFANDANPEVRALGRAARARRPQQANDYFAIGDLCARLTAQGATLSQTYAAKTVAAYTRAGELSSRDLPAARRAIIAFAFWIADAARTLGNYESIETALLICEQARRLISGAGLSHDERRLQMTEDRLREQMTRMFEGESASADKRASAERESRMLCDQGQILLRQGRPQEAFERFEAALAASDTNQSAWLWRAMALTDLGRFDDALASYDRALALEPESAGVWNNKGALLMELGRLEAALECFERAIDLAAPISTVKAVYWLNRGKVLYMLGRYAEARDALMHSHELEPSPESAAGIAACRERLEGSTGSNVL
>NC_009767.1|WP_012122846.1|5660361_5662068_+|ABC-transporter-ATP-binding-protein
MNNMGQQHTPIALHRVTFTYAGATEPALRNVTLTVPAGQICAVIGRAGAGKSTLCALCAGFVPHFFRGRLDGDASVDGLAIATHPIAELVRHVALVGSNAFSQISGARFTVYDEVAFGLENLGVPREEMIARVEWALQALGIDHLRDRSPYALSGGQQQRMVIAAALAMRPPVLALDEPTAQLDPPAMAELADVLRALSRQGMTILVAEHRLEWVADVAERVVALDRGAVLADGAPADVLTDPRLCERGIGWTRPTKIAAQARTDGRWPPNRPLPITVADLVAGLRAIATGQHPASAQDGAIDSTGVQPTSVQRMTHSTEPIVTLDEVHFTYPTGVEALRGASLAVRRGERIALVGRNGAGKSTLVRHLNGLLRPSRGRALVNGIDTRTTTVARCARHVGVVFQDVRNQLFARTVRDEIRFGPQNLGFAPEKVEALTETAIDALDLRDVVNEHPYDLPPARRRLVAVAAVLAMDTALLVLDEPTAGLDNASIDVLARLIDDLATRQRSVLVVSHDLDFCYETLDRVVLMRDGRIALDKRFAELDRAQMEALDSDVGLPITLRLRYVNP
>NC_009767.1|WP_012122856.1|5676479_5679611_-|excinuclease-ABC-subunit-UvrA
MAKDAIVIKGAREHNLKGIDLEIPRDKLVVLTGVSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGQMEKPKVDAIEGLSPAIAIEQKSASKNPRSTVGTVTEIYDYLRLLYARVGTQHCHVCGRPVSSQSAEQMVNRVLTLPTGTRFMVLAPLVSQRKGEYKDVFAEARAEGFARVRVDGEIFDLAGEIKLNKKVKHTIEIVIDRLAMPARDAARDQVRSSDAPIGRAQEGSQSEWDAFVTRLTDSVEQALRVGEGQLIISIQNKTGAAEEWLMSEANTCTHCGISFPELSPQMFSFNSPQGACPECTGLGVRLEVDPLLLVPNPSLTLHEGAVTYWGELRKKRDSWGYRALLAIARHYGFDLDTPWEQLSEQARHVIIYGSGKERIRFQWGDEGGDSRGEFTRTWEGLASEIRRRFQQTGSDYTREYYQSFMSEQPCPACSGARLRPESLAVRVGGLSIRDVTRMTIAGALAWVNALSGISGNIAHLADLEGQVMPGVVAGNGAAHHGAVTPLTDYQMAIVNDVLKEIRERLGFLLNVGLHYLTLERPAPTLSGGEAQRIRLASQIGSGLVGVTYILDEPSIGLHQRDNRKLLDTLLKLRDLGNTVVVVEHDLETMQAADWIIDFGPGAGVKGGQVVAAGPPNVVAASPESLTGAYLAGRLEIPTPQQRRTARVRPVANGLQDAPRRRRVDHQSDLAEGPWLELEGATMNNLRDVTVRFPLGVFMCVTGVSGSGKSSLITETLYPALANRLHRAQLKPGPFRALRGLEHLDKVIDIDQQPIGRTPRSNPATYVKLFDLIRELFASTNEAKLRGYNAGRFSFNLKGGRCEACEGNGEKRIDMQFLADVWVRCDVCKGKRYNRETLQVKYKGKSIADVLDMDVQTALEFFDNVPRIKRMLQTLHDVGLDYIKLGQSATTLSGGEAQRVKLAKELARVATGRTMYILDEPTTGLHFADVQRLLTVLHRLVDAGNTVLVIEHNLDVIKTADWIIDMGPEGGDGGGTVVAVGTPEEVAMIEASHTGRFLREILYATGVKGVAQD
>NC_009767.1|WP_012122857.1|5680113_5681841_+|DDE-transposase
MFRKNTRHWQIPLTSHVDELPEPLRRRLENSWAGTFYREFFSRLDEGPFAVLYSDLISRPNVPVNVLVGLEFLKAANGWTDEEMYDHFCYDVQVRYALGYRQLSEGCFDLRTLYYFRERLAQHAQETGENLLERAFEQVTGEQLRAFSIKSGKQRMDSTLLASNIRQMGRIQLLVTVLQRVWRMLSEADQQRYAQRFERYTKGHPGQYIYRLKKEEWPEHLQRIGEDMRTLLQELQAAYGEQPTYAVLARVFAEHFRLEKEKLQVKEASELSARSLQSPDDLEATYREKHGKSSRGYVVNLTETCDPDNPLQLVTKIQVAPNVTDDSALLAEALPDLKERTGLEELYTDGAYGSAENDKRLAEQEVTLIQSAIRGRKRKEERLYLDDFTLPGDTHNGALNLTCPHAQQAPVRGAKQGKSYRATFDAQVCGNCPLQPRCPVQPRKNGEAVLLFTEEDLRRAQRRRRMRQADSGERNLRSATEASIRSLKHPFPAGKLPVRGRFRAACLLIGSAAVMTVRRIHRYLQSQIAGNRPGEQAKRMTKRLAEQAEHVFFFGRTLLQAFGLYRRINSPVLTW
>NC_009767.1|WP_012122858.1|5682247_5683552_-|MFS-transporter
MHHIIERWRALKTDARRYLLHLAILTLSLSVVGLYYNLAVLALGYSRGFLGILQTVTQAVAALLSLPLWLGVQRLGLRAAIITSVALYAAGILLFAAFPQAALLICSAALMGMASVLMQVTAAPLMMRLSNDATRDDLFSASAAVAVGLSGIGNLGAGFIADTLSHVLGAPADSGATYRAVFAIAGIGVLASLPPLFLIREPERAPESPLPESGASPSGTGSFFGGLPSWLLVAQPWFWRLPTPLRALLRKPAFVAKLLLPPFLISWGAALLIPYLNLYFRERFGLDNRALGVLFAGFDVATGLASLTGPALAARLGKMRTVAVTRAIGVPLLLILGAASDLWLAIAAALARVMASNMASPLYDAYAMEQTEESARPFMIGLLGAAYSIGFLIAPLISTFVQERYGFGPLFVATAILYALSVAVTWWFFGKERP
>NC_009767.1|WP_012122859.1|5684674_5685646_-|aldo/keto-reductase
MIDIPLSLPRRPLGRTGFQVTPLCVGCAPLGNMPETFAYSVAEDQAIATLLEAFRSPINFFDTAAIYGDGESERRIGKVLAMIGGLPDGVVLATKADRDAATGDFSGDQIRRSVERSLTLLGLDRLQFVYIHDPEHTTFENVMGKGGPLEVLQRFQAEGIIAHIGISGGPIDMLIRYVETGAFMAVETHNRYTLLNRSAEPLLDVAVSRGVAVVNAAPYGSGILAKGPDAYARYAYQDAPPALVERVRAMAAVCQEYGVPLAAAALQFSLRDPRITSTVVGVSKPERIAATLDLARVPIPDDLWQRLDAVGFDTNDPEEHRFK
>NC_009767.1|WP_012122860.1|5686363_5687617_-|DUF418-domain-containing-protein
MSHAIAPTTARERIDLLDILRGFALLGILIVNMGIFSFPFIAAFTGTPRGESTFDHAVEFLTHALATGKFYPLFSFLFGLGMWLQMERVQEAGGAPARFMVRRLLVLMGFGLAHALLIWNGDILFIYALVGLVALLFRKAQPRTLLIWASALIAIPIILSAGLIVLGILVAGLAPTNASGMDEVMTLVRDLERQAIETYARGSWGQIFAWRAIEWLIVLVFFFLSGNVLQILAIFLIGMYAGKRQVLQRLMQLPANERRLPAGRVCLVVGLVANFALTWLMWTVDMTSPLAGLPSVLLLIFGPVLSYGYMAAFVALTRREAWHRRLEPLAAAGRMALSNYIAQSIVCTLIFYSYGLGLFGQVGAFAGLLISLTIWLVQLVISVFWLKRFRFGPLEWVWRSLTYGAPQTMAKTRQLAA
>NC_009767.1|WP_012122861.1|5688341_5691509_+|AAA-family-ATPase
MLTILLLGPPQILSDGIPVTVSRRRARALVYYLAAQDKPVHRERLIDLFWHDHDHAAARQLLRTTLHSVRRVLGSAVEGDEEVTLALDADVDYRALVTAVTAPIGNESILSAALERYRDDLLTGFTLPDAPLFADWLEAERERARLLAMRGYTHLARIAEMRGDLAAALTALDRALTFDPLQEDLQREIMRLHYLSGDRVGAIRRYENLRDLLDAELGVPPMRETRELYDAIVTDRLLDSASTQYRSLESERYKQRNVSSNRPPPARHTLPSLLPFIGRSAEMEAIEMVGAGRLMLIEGETGIGKTRLAFEALERHTARGGLTLIAAARELEQGLPYRPWIDLLRDLLARPNWHMLRAHLNLDPLWFGEAARLLPELAPGSSATTQADEARLWEGVTRLLIALASLKPLMLLFDDLHWADASSLGLLGYVVRRAEEASVRLIATARTTDHQAALRILLNALTREGRLERILLRRLSTTDTEALARALSPDDAARLASWLYRNTEGNPFVIAELVRHARTTGLLSADGRLSPVLPDEPVVPVSVYGLIQSQLARLSDEARRVLDTAATVGRVFSFDVVARAAALSEEAALDALDELRAARLIEPLANGRFQFDHSLTMEVAYREMGEPRHRALHRRVAEALEALNRDCLDDVAGLIAWHFAEGGVPERAATYAVRAGRRAARVAAWTEAIAFYEQALAGLGASQRFDALMNLGEALVMGGKAAQAAERFRESLALARTPAEARRARLSLARALAPQGRYAEMIEAVRGLEQRGDLRDRITALFLWGTALSLEGSDLIGAALRLREAARLILAQPAPDPIALAQVRFELGSVAAQQGDLSAAVASYREALAATDSATAHPEALTWRILACNNLAYHLHLQGRLDEAEHWLDEGLRLANEYGMLGLQPYLLSTQGEIALARGNLDAAESSFLAGLTLAERMVVSERVAGITANLGLVALHRGHATLAIHHLSIALARADTLGTRHLAAQIRIWLAPLLPPDEARTVLAQARTIAESGGRRRLLADIARVEYQLRLRMPHAGHSERSEESERVAQDPSL
>NC_009767.1|WP_012122862.1|5691649_5692216_+|YceI-family-protein
MAQWIIDDSHSLIQFTVRHMMISKVRGRFDRFSGTITADEQNPANSSVYVQIEAASINTRDARRDGHLTSPDFLDVAHYPHITFVSKRIEVLDESRGRMVGDLTIRGVTHEVTLDVEYNGQARSPWGTVSAGFHASTTINRKDWGLTWNMALETGGVLVGDEVEIDIEVELIRQEEQPTETVEATAAS
>NC_009767.1|WP_012122863.1|5692163_5694242_-|hydantoinase/oxoprolinase-family-protein
MDILGIDIGGTFTDFVLLRNGRVRIYKTLSTPDDPACALLQGVDTLGAPATIVHGTTVATNALLERRGAATALVTTGGFGDVLVIGRGNRPTLYDLNVTRLDPPVPEAWRFELIERMLPDGSVLTPLDDSELARLVAWIGEHPVESVAICLLHSYANPSHEDQVIAALDRAARTSQRSLFIFASHRVLPEPREYERTSTTVVNAYVSPILGRYLDRLGPALRDRGVRSIRIMASDGGSMGLVTARELAARATLSGPAGGVVGAYAVARRAGFNRIITFDMGGTSTDVALVDGTLPHTSESQVGGLPVRLPSLDIHTVGAGGGSLARIDAGGALRVGPQSAGADPGPACYGRGTLPTVTDANLLLGRLQADYFLGGHMTLDVERARMAFITLAHDLFGAQSPDDEQRAALGVVRIANALMERAIRAISVERGDDPRDCALVAFGGAGPLHAAHLAAALGIRTVLIPRYPGVLSALGMIAADVTRESSRALLTTLDALDTTTLAVHIAALADEALAALAADGEDLNGCRIECVLDLRYAGQSYELPTSLESGWEKSPTPLTDLAERFHALHERRYGHAMRERRIEAVTLRVRAVSPRSAIDFAPEELPPRASPLMPRTVVQAALNGDTAALEPAPLYERDDLRPGDAIDGPAIIAQFDATTIAPPGWRVVVDADLNLIMTPLSPRLSPSAVPPA
>NC_009767.1|WP_012122864.1|5694241_5696104_-|hypothetical-protein
MTRIRIALLIIPFVALALTACEQLSIAEQERIREIQTVEASTPTATPVPPTDTPTPLPPTATSTSGPTPTPPPPTPTPEPTPTPLPPTPTPNPILAQFSLCNQQVGDPGGGRFSMRVTSITTTVDAFFERLELTLDVPADSVLPHASARCRRAPAASQMVGEVEVTGAYLIEVQLDGWLRDDAFRASLATPTIPLSGTQVMRAAAFRAPPGAIAGAQLVIGVDQPFPFRLRLEDNPLRLVIDVATSGPVSQASDLLRIPAGAPAAPVAPMFYLADGDIWRISNGAPENLTERLRAGQFGDVTALTTRPNAPLLAFCATAPGAVAADVTAASTLWVLELDSGSIRQLSPPPRGRSCADPVLSPDGTTIAYAVDESGGAPPQLRIFSVQVFPGAPAVALTPSGDEWSRYAPQWLDDARLVYAATAEDGRRTLFLRESDGTELDIGMALLVSGTGGQRSARYDGFGRLIAAPDGRAIAVEAFRIDGSGADLLILNRSGAEIERLSPIAAGFWNRPVAWSADGALYYLSTACASDAVYEYTLHVRSADGGDRVIAAGIATGDLGVFTVHQNALAYVTFDRLPGGPGGPLRVAPDDPAALWYWDLAGNTRTRLVETRRAITALAP
>NC_009767.1|WP_012122865.1|5696450_5697146_-|response-regulator-transcription-factor
MSSTSIVLVNAHALFREGLRHHLANSTEFHVIGEASNGQQAIQVVDLLDPDMVVMEVDLPGVNGLEVARAIKRSHPHIRIVLLSSTMDGQEVVKAIRAGIAACVPRNIAPEKLMQTLHQVRRGNYPINDLVLSSPDVAAQVLNAFRQMAAEEDTQSIYSPLSPRELQVLELVAAGRTNKEIAKVLDISNQTVKNHISSILRKLAVNDRTQAVVYAMRRGWIKVALPGDPLT

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_009767_11	11.5|681336|31|NC_009767|CRISPRCasFinder	681336-681366	31	NC_009767.1	681456-681486	0	1.0
NC_009767_12	12.1|708293|34|NC_009767|CRT	708293-708326	34	NC_009767.1	707803-707836	0	1.0
NC_009767_12	12.1|708293|34|NC_009767|CRT	708293-708326	34	NC_009767.1	708027-708060	0	1.0
NC_009767_12	12.2|708363|35|NC_009767|CRT	708363-708397	35	NC_009767.1	707873-707907	0	1.0
NC_009767_12	12.3|708434|34|NC_009767|CRT	708434-708467	34	NC_009767.1	707803-707836	0	1.0
NC_009767_12	12.3|708434|34|NC_009767|CRT	708434-708467	34	NC_009767.1	708027-708060	0	1.0
NC_009767_21	21.1|1001152|21|NC_009767|CRT	1001152-1001172	21	NC_009767.1	1002207-1002227	0	1.0
NC_009767_21	21.1|1001152|21|NC_009767|CRT	1001152-1001172	21	NC_009767.1	3980734-3980754	0	1.0
NC_009767_21	21.1|1001152|21|NC_009767|CRT	1001152-1001172	21	NC_009767.1	3980964-3980984	0	1.0
NC_009767_21	21.1|1001152|21|NC_009767|CRT	1001152-1001172	21	NC_009767.1	5539797-5539817	0	1.0
NC_009767_21	21.1|1001152|21|NC_009767|CRT	1001152-1001172	21	NC_009767.1	4711510-4711530	0	1.0
NC_009767_21	21.1|1001152|21|NC_009767|CRT	1001152-1001172	21	NC_009767.1	4740397-4740417	0	1.0
NC_009767_21	21.2|1001207|21|NC_009767|CRT	1001207-1001227	21	NC_009767.1	1002207-1002227	0	1.0
NC_009767_21	21.2|1001207|21|NC_009767|CRT	1001207-1001227	21	NC_009767.1	3980734-3980754	0	1.0
NC_009767_21	21.2|1001207|21|NC_009767|CRT	1001207-1001227	21	NC_009767.1	3980964-3980984	0	1.0
NC_009767_21	21.2|1001207|21|NC_009767|CRT	1001207-1001227	21	NC_009767.1	5539797-5539817	0	1.0
NC_009767_21	21.2|1001207|21|NC_009767|CRT	1001207-1001227	21	NC_009767.1	4711510-4711530	0	1.0
NC_009767_21	21.2|1001207|21|NC_009767|CRT	1001207-1001227	21	NC_009767.1	4740397-4740417	0	1.0
NC_009767_21	21.4|1001331|21|NC_009767|CRT	1001331-1001351	21	NC_009767.1	5451730-5451750	0	1.0
NC_009767_21	21.4|1001331|21|NC_009767|CRT	1001331-1001351	21	NC_009767.1	5452206-5452226	0	1.0
NC_009767_21	21.4|1001331|21|NC_009767|CRT	1001331-1001351	21	NC_009767.1	5452710-5452730	0	1.0
NC_009767_21	21.4|1001331|21|NC_009767|CRT	1001331-1001351	21	NC_009767.1	5452850-5452870	0	1.0
NC_009767_21	21.5|1001386|21|NC_009767|CRT	1001386-1001406	21	NC_009767.1	1002207-1002227	0	1.0
NC_009767_21	21.5|1001386|21|NC_009767|CRT	1001386-1001406	21	NC_009767.1	3980734-3980754	0	1.0
NC_009767_21	21.5|1001386|21|NC_009767|CRT	1001386-1001406	21	NC_009767.1	3980964-3980984	0	1.0
NC_009767_21	21.5|1001386|21|NC_009767|CRT	1001386-1001406	21	NC_009767.1	5539797-5539817	0	1.0
NC_009767_21	21.5|1001386|21|NC_009767|CRT	1001386-1001406	21	NC_009767.1	4711510-4711530	0	1.0
NC_009767_21	21.5|1001386|21|NC_009767|CRT	1001386-1001406	21	NC_009767.1	4740397-4740417	0	1.0
NC_009767_21	21.6|1001441|21|NC_009767|CRT	1001441-1001461	21	NC_009767.1	1002207-1002227	0	1.0
NC_009767_21	21.6|1001441|21|NC_009767|CRT	1001441-1001461	21	NC_009767.1	3980734-3980754	0	1.0
NC_009767_21	21.6|1001441|21|NC_009767|CRT	1001441-1001461	21	NC_009767.1	3980964-3980984	0	1.0
NC_009767_21	21.6|1001441|21|NC_009767|CRT	1001441-1001461	21	NC_009767.1	5539797-5539817	0	1.0
NC_009767_21	21.6|1001441|21|NC_009767|CRT	1001441-1001461	21	NC_009767.1	4711510-4711530	0	1.0
NC_009767_21	21.6|1001441|21|NC_009767|CRT	1001441-1001461	21	NC_009767.1	4740397-4740417	0	1.0
NC_009767_21	21.9|1001634|21|NC_009767|CRT	1001634-1001654	21	NC_009767.1	1002207-1002227	0	1.0
NC_009767_21	21.9|1001634|21|NC_009767|CRT	1001634-1001654	21	NC_009767.1	3980734-3980754	0	1.0
NC_009767_21	21.9|1001634|21|NC_009767|CRT	1001634-1001654	21	NC_009767.1	3980964-3980984	0	1.0
NC_009767_21	21.9|1001634|21|NC_009767|CRT	1001634-1001654	21	NC_009767.1	5539797-5539817	0	1.0
NC_009767_21	21.9|1001634|21|NC_009767|CRT	1001634-1001654	21	NC_009767.1	4711510-4711530	0	1.0
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NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	2531747-2531767	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	2531851-2531871	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	2531948-2531968	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	2652049-2652069	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	4174050-4174070	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	4174128-4174148	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	4174236-4174256	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	4711510-4711530	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	4740189-4740209	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	4740397-4740417	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	4887891-4887911	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	4904354-4904374	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5263758-5263778	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5263884-5263904	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5264010-5264030	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5264104-5264124	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5264356-5264376	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5264443-5264463	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5264530-5264550	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5264789-5264809	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5264922-5264942	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5265094-5265114	2	0.905
NC_009767_21	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	NC_009767.1	5452066-5452086	2	0.905
NC_009767_43	43.1|2238202|42|NC_009767|CRT	2238202-2238243	42	NC_009767.1	2039787-2039828	2	0.952
NC_009767_43	43.1|2238202|42|NC_009767|CRT	2238202-2238243	42	NC_009767.1	2238788-2238829	2	0.952
NC_009767_43	43.1|2238202|42|NC_009767|CRT	2238202-2238243	42	NC_009767.1	2238898-2238939	2	0.952
NC_009767_43	43.1|2238202|42|NC_009767|CRT	2238202-2238243	42	NC_009767.1	2239070-2239111	2	0.952
NC_009767_43	43.1|2238202|42|NC_009767|CRT	2238202-2238243	42	NC_009767.1	2239373-2239414	2	0.952
NC_009767_43	43.1|2238202|42|NC_009767|CRT	2238202-2238243	42	NC_009767.1	2239504-2239545	2	0.952
NC_009767_43	43.1|2238202|42|NC_009767|CRT	2238202-2238243	42	NC_009767.1	2239642-2239683	2	0.952
NC_009767_43	43.2|2238280|47|NC_009767|CRT	2238280-2238326	47	NC_009767.1	2238790-2238836	2	0.957
NC_009767_43	43.2|2238280|47|NC_009767|CRT	2238280-2238326	47	NC_009767.1	2239072-2239118	2	0.957
NC_009767_43	43.2|2238280|47|NC_009767|CRT	2238280-2238326	47	NC_009767.1	2239506-2239552	2	0.957
NC_009767_43	43.3|2238363|40|NC_009767|CRT	2238363-2238402	40	NC_009767.1	454836-454875	2	0.95
NC_009767_43	43.4|2238439|40|NC_009767|CRT	2238439-2238478	40	NC_009767.1	2238515-2238554	2	0.95
NC_009767_85	85.1|4732841|27|NC_009767|CRISPRCasFinder	4732841-4732867	27	NC_009767.1	4767515-4767541	2	0.926
NC_009767_85	85.1|4732841|27|NC_009767|CRISPRCasFinder	4732841-4732867	27	NC_009767.1	4769444-4769470	2	0.926
NC_009767_86	86.1|4767267|27|NC_009767|CRISPRCasFinder	4767267-4767293	27	NC_009767.1	4769345-4769371	2	0.926
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	1948406-1948433	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	3468551-3468578	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	3468730-3468757	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	3468909-3468936	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	3469025-3469052	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	3469141-3469168	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	3469373-3469400	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4709676-4709703	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4709935-4709962	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4711293-4711320	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4740302-4740329	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	5263788-5263815	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	25031-25058	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	3574225-3574252	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4329892-4329919	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4330052-4330079	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4330741-4330768	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4331082-4331109	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4668399-4668426	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4668579-4668606	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4913631-4913658	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4913793-4913820	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4921448-4921475	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4921821-4921848	2	0.929
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	NC_009767.1	4922175-4922202	2	0.929
NC_009767_98	98.2|5453194|34|NC_009767|CRT	5453194-5453227	34	NC_009767.1	5452424-5452457	2	0.941
NC_009767_98	98.2|5453194|34|NC_009767|CRT	5453194-5453227	34	NC_009767.1	5452550-5452583	2	0.941
NC_009767_98	98.2|5453194|34|NC_009767|CRT	5453194-5453227	34	NC_009767.1	5452620-5452653	2	0.941
NC_009767_37	37.3|2062676|72|NC_009767|PILER-CR	2062676-2062747	72	NC_009767.1	2062132-2062203	12	0.833

1. spacer 11.5|681336|31|NC_009767|CRISPRCasFinder matches to position: 681456-681486, mismatch: 0, identity: 1.0

gttgactacaacgttgcaaaacaggtgatgc	CRISPR spacer
gttgactacaacgttgcaaaacaggtgatgc	Protospacer
*******************************

2. spacer 12.1|708293|34|NC_009767|CRT matches to position: 707803-707836, mismatch: 0, identity: 1.0

ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
ggtggagaggcaagaggcgagaggcaagaggcgg	Protospacer
**********************************

3. spacer 12.1|708293|34|NC_009767|CRT matches to position: 708027-708060, mismatch: 0, identity: 1.0

ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
ggtggagaggcaagaggcgagaggcaagaggcgg	Protospacer
**********************************

4. spacer 12.2|708363|35|NC_009767|CRT matches to position: 707873-707907, mismatch: 0, identity: 1.0

tggggagagttgtgagagaggcgaggtgagagagt	CRISPR spacer
tggggagagttgtgagagaggcgaggtgagagagt	Protospacer
***********************************

5. spacer 12.3|708434|34|NC_009767|CRT matches to position: 707803-707836, mismatch: 0, identity: 1.0

ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
ggtggagaggcaagaggcgagaggcaagaggcgg	Protospacer
**********************************

6. spacer 12.3|708434|34|NC_009767|CRT matches to position: 708027-708060, mismatch: 0, identity: 1.0

ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
ggtggagaggcaagaggcgagaggcaagaggcgg	Protospacer
**********************************

7. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 1002207-1002227, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

8. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 3980734-3980754, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

9. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 3980964-3980984, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

10. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5539797-5539817, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

11. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4711510-4711530, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

12. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4740397-4740417, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

13. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 1002207-1002227, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

14. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 3980734-3980754, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

15. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 3980964-3980984, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

16. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5539797-5539817, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

17. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4711510-4711530, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

18. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4740397-4740417, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

19. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5451730-5451750, mismatch: 0, identity: 1.0

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
*********************

20. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5452206-5452226, mismatch: 0, identity: 1.0

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
*********************

21. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5452710-5452730, mismatch: 0, identity: 1.0

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
*********************

22. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5452850-5452870, mismatch: 0, identity: 1.0

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
*********************

23. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 1002207-1002227, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

24. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 3980734-3980754, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

25. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 3980964-3980984, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

26. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5539797-5539817, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

27. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4711510-4711530, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

28. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4740397-4740417, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

29. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 1002207-1002227, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

30. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 3980734-3980754, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

31. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 3980964-3980984, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

32. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5539797-5539817, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

33. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4711510-4711530, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

34. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4740397-4740417, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

35. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 1002207-1002227, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

36. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 3980734-3980754, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

37. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 3980964-3980984, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

38. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5539797-5539817, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

39. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4711510-4711530, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

40. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4740397-4740417, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

41. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 1002207-1002227, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

42. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 3980734-3980754, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

43. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 3980964-3980984, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

44. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5539797-5539817, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

45. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4711510-4711530, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

46. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4740397-4740417, mismatch: 0, identity: 1.0

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*********************

47. spacer 22.1|1020303|35|NC_009767|CRISPRCasFinder matches to position: 3967809-3967843, mismatch: 0, identity: 1.0

cttgttcgacatcattgacaatctggccaatccca	CRISPR spacer
cttgttcgacatcattgacaatctggccaatccca	Protospacer
***********************************

48. spacer 34.2|1838353|19|NC_009767|CRT matches to position: 1838500-1838518, mismatch: 0, identity: 1.0

cgcgcgacaggcagccgag	CRISPR spacer
cgcgcgacaggcagccgag	Protospacer
*******************

49. spacer 43.1|2238202|42|NC_009767|CRT matches to position: 2239808-2239849, mismatch: 0, identity: 1.0

ggcgcgaccatggcgtagcgcgagatgtatctcgcatttgta	CRISPR spacer
ggcgcgaccatggcgtagcgcgagatgtatctcgcatttgta	Protospacer
******************************************

50. spacer 43.2|2238280|47|NC_009767|CRT matches to position: 2239313-2239359, mismatch: 0, identity: 1.0

cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	CRISPR spacer
cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	Protospacer
***********************************************

51. spacer 49.40|2547148|39|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to position: 3045734-3045772, mismatch: 0, identity: 1.0

atgtcggcgtggcggcgctgtaccgcactgcgccggagg	CRISPR spacer
atgtcggcgtggcggcgctgtaccgcactgcgccggagg	Protospacer
***************************************

52. spacer 54.3|2919178|18|NC_009767|CRT matches to position: 2913712-2913729, mismatch: 0, identity: 1.0

ctcccctctcaccccgcg	CRISPR spacer
ctcccctctcaccccgcg	Protospacer
******************

53. spacer 54.3|2919178|18|NC_009767|CRT matches to position: 2913754-2913771, mismatch: 0, identity: 1.0

ctcccctctcaccccgcg	CRISPR spacer
ctcccctctcaccccgcg	Protospacer
******************

54. spacer 54.3|2919178|18|NC_009767|CRT matches to position: 3014456-3014473, mismatch: 0, identity: 1.0

ctcccctctcaccccgcg	CRISPR spacer
ctcccctctcaccccgcg	Protospacer
******************

55. spacer 54.3|2919178|18|NC_009767|CRT matches to position: 3014533-3014550, mismatch: 0, identity: 1.0

ctcccctctcaccccgcg	CRISPR spacer
ctcccctctcaccccgcg	Protospacer
******************

56. spacer 59.1|3046725|47|NC_009767|CRISPRCasFinder matches to position: 3046917-3046963, mismatch: 0, identity: 1.0

acgcaggcgctgctcaacgacgaaccgtgccacgccacgtttctcta	CRISPR spacer
acgcaggcgctgctcaacgacgaaccgtgccacgccacgtttctcta	Protospacer
***********************************************

57. spacer 98.3|5453264|20|NC_009767|CRT matches to position: 5453320-5453339, mismatch: 0, identity: 1.0

gatctcgcaacgaggcgcga	CRISPR spacer
gatctcgcaacgaggcgcga	Protospacer
********************

58. spacer 100.1|5485389|45|NC_009767|CRISPRCasFinder matches to position: 5485500-5485544, mismatch: 0, identity: 1.0

ctgcgctgcccacctcctctgcttcggtcgctgtaccggttattg	CRISPR spacer
ctgcgctgcccacctcctctgcttcggtcgctgtaccggttattg	Protospacer
*********************************************

59. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 960663-960683, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

60. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 960726-960746, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

61. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 960810-960830, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

62. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 960978-960998, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

63. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 961146-961166, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

64. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 1505088-1505108, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

65. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 1505318-1505338, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

66. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 1505484-1505504, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

67. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 1505636-1505656, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

68. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2243646-2243666, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

69. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 3980672-3980692, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggttgggcgcctcgcgcct	Protospacer
*****.***************

70. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540156-5540176, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtgcctcgcgcct	Protospacer
*********.***********

71. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2038314-2038334, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

72. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2038369-2038389, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

73. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2038590-2038610, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

74. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2197470-2197490, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

75. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2197539-2197559, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

76. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2197608-2197628, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

77. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2197677-2197697, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

78. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2197746-2197766, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

79. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2198087-2198107, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

80. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2246323-2246343, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

81. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2681516-2681536, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

82. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2681580-2681600, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

83. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2681644-2681664, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

84. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2681796-2681816, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

85. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4174734-4174754, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

86. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5451730-5451750, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

87. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5452206-5452226, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

88. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5452710-5452730, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

89. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5452850-5452870, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

90. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 960663-960683, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

91. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 960726-960746, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

92. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 960810-960830, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

93. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 960978-960998, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

94. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 961146-961166, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

95. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 1505088-1505108, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

96. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 1505318-1505338, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

97. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 1505484-1505504, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

98. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 1505636-1505656, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

99. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2243646-2243666, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

100. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 3980672-3980692, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggttgggcgcctcgcgcct	Protospacer
*****.***************

101. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540156-5540176, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtgcctcgcgcct	Protospacer
*********.***********

102. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2038314-2038334, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

103. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2038369-2038389, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

104. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2038590-2038610, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

105. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2197470-2197490, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

106. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2197539-2197559, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

107. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2197608-2197628, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

108. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2197677-2197697, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

109. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2197746-2197766, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

110. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2198087-2198107, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

111. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2246323-2246343, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

112. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2681516-2681536, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

113. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2681580-2681600, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

114. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2681644-2681664, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

115. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2681796-2681816, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

116. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4174734-4174754, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

117. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5451730-5451750, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

118. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5452206-5452226, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

119. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5452710-5452730, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

120. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5452850-5452870, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

121. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 1002207-1002227, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
********** **********

122. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 1505394-1505414, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
***************.*****

123. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 1505574-1505594, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
***************.*****

124. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 3980734-3980754, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
********** **********

125. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 3980964-3980984, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
********** **********

126. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4754512-4754532, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

127. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4754800-4754820, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

128. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4754868-4754888, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

129. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4755080-4755100, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

130. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4755148-4755168, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

131. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4755216-4755236, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

132. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4755520-4755540, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

133. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4755588-4755608, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

134. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4930247-4930267, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

135. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5539797-5539817, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
********** **********

136. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540087-5540107, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

137. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540225-5540245, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

138. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540515-5540535, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

139. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540584-5540604, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

140. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540653-5540673, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

141. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540715-5540735, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

142. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540784-5540804, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

143. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540853-5540873, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

144. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540922-5540942, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

145. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540991-5541011, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

146. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2238503-2238523, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgcgcccctcgcgcct	Protospacer
******* *************

147. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2352841-2352861, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

148. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2352919-2352939, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
********* ***********

149. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4711510-4711530, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
********** **********

150. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4740397-4740417, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
********** **********

151. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4904354-4904374, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
***************.*****

152. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5452066-5452086, mismatch: 1, identity: 0.952

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********.***********

153. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 960663-960683, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

154. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 960726-960746, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

155. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 960810-960830, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

156. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 960978-960998, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

157. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 961146-961166, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

158. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 1505088-1505108, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

159. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 1505318-1505338, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

160. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 1505484-1505504, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

161. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 1505636-1505656, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

162. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2243646-2243666, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

163. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 3980672-3980692, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggttgggcgcctcgcgcct	Protospacer
*****.***************

164. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540156-5540176, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtgcctcgcgcct	Protospacer
*********.***********

165. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2038314-2038334, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

166. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2038369-2038389, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

167. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2038590-2038610, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

168. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2197470-2197490, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

169. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2197539-2197559, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

170. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2197608-2197628, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

171. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2197677-2197697, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

172. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2197746-2197766, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

173. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2198087-2198107, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

174. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2246323-2246343, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

175. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2681516-2681536, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

176. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2681580-2681600, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

177. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2681644-2681664, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

178. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2681796-2681816, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

179. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4174734-4174754, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

180. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5451730-5451750, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

181. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5452206-5452226, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

182. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5452710-5452730, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

183. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5452850-5452870, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

184. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 960663-960683, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

185. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 960726-960746, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

186. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 960810-960830, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

187. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 960978-960998, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

188. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 961146-961166, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

189. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 1505088-1505108, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

190. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 1505318-1505338, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

191. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 1505484-1505504, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

192. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 1505636-1505656, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

193. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2243646-2243666, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

194. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 3980672-3980692, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggttgggcgcctcgcgcct	Protospacer
*****.***************

195. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540156-5540176, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtgcctcgcgcct	Protospacer
*********.***********

196. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2038314-2038334, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

197. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2038369-2038389, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

198. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2038590-2038610, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

199. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2197470-2197490, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

200. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2197539-2197559, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

201. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2197608-2197628, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

202. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2197677-2197697, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

203. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2197746-2197766, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

204. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2198087-2198107, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

205. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2246323-2246343, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

206. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2681516-2681536, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

207. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2681580-2681600, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

208. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2681644-2681664, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

209. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2681796-2681816, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

210. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4174734-4174754, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

211. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5451730-5451750, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

212. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5452206-5452226, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

213. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5452710-5452730, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

214. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5452850-5452870, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

215. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 960502-960522, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctgttgcct	Protospacer
************** ******

216. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 960551-960571, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctgttgcct	Protospacer
************** ******

217. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 960873-960893, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctgttgcct	Protospacer
************** ******

218. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 961041-961061, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctgttgcct	Protospacer
************** ******

219. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 2197470-2197490, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
****************.****

220. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 2197539-2197559, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
****************.****

221. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 2197608-2197628, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
****************.****

222. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 2197677-2197697, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
****************.****

223. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 2197746-2197766, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
****************.****

224. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5264191-5264211, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctcttgcct	Protospacer
** ******************

225. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 960663-960683, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

226. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 960726-960746, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

227. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 960810-960830, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

228. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 960978-960998, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

229. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 961146-961166, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

230. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 1505088-1505108, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

231. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 1505318-1505338, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

232. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 1505484-1505504, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

233. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 1505636-1505656, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

234. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2243646-2243666, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

235. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 3980672-3980692, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggttgggcgcctcgcgcct	Protospacer
*****.***************

236. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540156-5540176, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtgcctcgcgcct	Protospacer
*********.***********

237. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2038314-2038334, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

238. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2038369-2038389, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

239. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2038590-2038610, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

240. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2197470-2197490, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

241. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2197539-2197559, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

242. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2197608-2197628, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

243. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2197677-2197697, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

244. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2197746-2197766, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

245. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2198087-2198107, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

246. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2246323-2246343, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

247. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2681516-2681536, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

248. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2681580-2681600, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

249. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2681644-2681664, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

250. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2681796-2681816, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

251. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4174734-4174754, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

252. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5451730-5451750, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

253. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5452206-5452226, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

254. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5452710-5452730, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

255. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5452850-5452870, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

256. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 960502-960522, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctgttgcct	Protospacer
************** ******

257. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 960551-960571, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctgttgcct	Protospacer
************** ******

258. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 960873-960893, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctgttgcct	Protospacer
************** ******

259. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 961041-961061, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctgttgcct	Protospacer
************** ******

260. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 2197470-2197490, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
****************.****

261. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 2197539-2197559, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
****************.****

262. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 2197608-2197628, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
****************.****

263. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 2197677-2197697, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
****************.****

264. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 2197746-2197766, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
****************.****

265. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5264191-5264211, mismatch: 1, identity: 0.952

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctcttgcct	Protospacer
** ******************

266. spacer 21.11|1001744|42|NC_009767|CRT matches to position: 3980734-3980775, mismatch: 1, identity: 0.976

atggtcgggcgcctcgcgcctcgcgcctcgcgcctcgcacct	CRISPR spacer
atggtcgggcgcctcgcgcctcgcgcctcgcacctcgcacct	Protospacer
*******************************.**********

267. spacer 21.11|1001744|42|NC_009767|CRT matches to position: 5539797-5539838, mismatch: 1, identity: 0.976

atggtcgggcgcctcgcgcctcgcgcctcgcgcctcgcacct	CRISPR spacer
atggtcgggcgcctcgcgcctcgcacctcgcgcctcgcacct	Protospacer
************************.*****************

268. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 960663-960683, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

269. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 960726-960746, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

270. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 960810-960830, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

271. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 960978-960998, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
******************.**

272. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 961146-961166, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

273. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 1505088-1505108, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

274. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 1505318-1505338, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

275. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 1505484-1505504, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

276. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 1505636-1505656, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
***************.*****

277. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2243646-2243666, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

278. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 3980672-3980692, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggttgggcgcctcgcgcct	Protospacer
*****.***************

279. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540156-5540176, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtgcctcgcgcct	Protospacer
*********.***********

280. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2038314-2038334, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

281. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2038369-2038389, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

282. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2038590-2038610, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

283. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2197470-2197490, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

284. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2197539-2197559, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

285. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2197608-2197628, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

286. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2197677-2197697, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

287. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2197746-2197766, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
*************** *****

288. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2198087-2198107, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
************** ******

289. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2246323-2246343, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

290. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2681516-2681536, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* *************

291. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2681580-2681600, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

292. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2681644-2681664, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

293. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2681796-2681816, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
***********.*********

294. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4174734-4174754, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******************

295. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5451730-5451750, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

296. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5452206-5452226, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

297. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5452710-5452730, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

298. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5452850-5452870, mismatch: 1, identity: 0.952

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
********** **********

299. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 24412-24432, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcgcccct	Protospacer
***************** ***

300. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 24481-24501, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcgcccct	Protospacer
***************** ***

301. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 1629689-1629709, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcgcccct	Protospacer
***************** ***

302. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2243646-2243666, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
********** **********

303. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2243785-2243805, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggctcctcgcgcct	Protospacer
**********.**********

304. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2244109-2244129, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

305. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 3669872-3669892, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

306. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 3669927-3669947, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

307. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 3679231-3679251, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtccctcgcgcct	Protospacer
*********.***********

308. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 982549-982569, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtccctcgcgcct	Protospacer
*********.***********

309. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2245996-2246016, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

310. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2246177-2246197, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

311. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2246323-2246343, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
********** **********

312. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2246441-2246461, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

313. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2246517-2246537, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

314. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2246593-2246613, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

315. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2246669-2246689, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

316. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2246745-2246765, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

317. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2298712-2298732, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcgtgcct	Protospacer
****************.****

318. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4174734-4174754, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
********** **********

319. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5451730-5451750, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
** ******************

320. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5452206-5452226, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
** ******************

321. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5452710-5452730, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
** ******************

322. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5452850-5452870, mismatch: 1, identity: 0.952

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcgcgcct	Protospacer
** ******************

323. spacer 43.1|2238202|42|NC_009767|CRT matches to position: 2238513-2238554, mismatch: 1, identity: 0.976

ggcgcgaccatggcgtagcgcgagatgtatctcgcatttgta	CRISPR spacer
ggcgcgaccatggcgtagcgcgagatgtatctcgcattggta	Protospacer
************************************** ***

324. spacer 43.2|2238280|47|NC_009767|CRT matches to position: 2238618-2238664, mismatch: 1, identity: 0.979

cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	CRISPR spacer
cttgaccatggcgtagcgcgagatttatctcgcatttgtagcgaggg	Protospacer
*************************************.*********

325. spacer 43.2|2238280|47|NC_009767|CRT matches to position: 2238680-2238726, mismatch: 1, identity: 0.979

cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	CRISPR spacer
cttgaccatggcgtagcgcgagatttatctcgcatttgtagcgaggg	Protospacer
*************************************.*********

326. spacer 43.2|2238280|47|NC_009767|CRT matches to position: 2238976-2239022, mismatch: 1, identity: 0.979

cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	CRISPR spacer
cttgaccatggcgtagcgcgagatgtatctcgcatttatagcgaggg	Protospacer
************************ **********************

327. spacer 43.2|2238280|47|NC_009767|CRT matches to position: 2239024-2239070, mismatch: 1, identity: 0.979

cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	CRISPR spacer
cttgaccatggcgtagcgcgagatgtatctcgcatttatagcgaggg	Protospacer
************************ **********************

328. spacer 43.2|2238280|47|NC_009767|CRT matches to position: 2239251-2239297, mismatch: 1, identity: 0.979

cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	CRISPR spacer
cttgaccatggcgtagcgcgagatttatctcgcatttgtagcgaggg	Protospacer
*************************************.*********

329. spacer 43.2|2238280|47|NC_009767|CRT matches to position: 2239458-2239504, mismatch: 1, identity: 0.979

cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	CRISPR spacer
cttgaccatggcgtagcgcgagatgtatctcgcatttatagcgaggg	Protospacer
************************ **********************

330. spacer 43.4|2238439|40|NC_009767|CRT matches to position: 2239810-2239849, mismatch: 1, identity: 0.975

cgcgaccatggcgtagcgcaagatgtatctcgcatttgta	CRISPR spacer
cgcgaccatggcgtagcgcgagatgtatctcgcatttgta	Protospacer
*******************.********************

331. spacer 53.1|2848497|52|NC_009767|PILER-CR matches to position: 2848843-2848894, mismatch: 1, identity: 0.981

cgctcggggtgacaattctctccgatctctcacgatccaaccagatagttga	CRISPR spacer
cgctcggggtgacaattctctccgatctctcacgatccaaccagatggttga	Protospacer
**********************************************.*****

332. spacer 53.3|2848670|52|NC_009767|PILER-CR matches to position: 2848843-2848894, mismatch: 1, identity: 0.981

cgctcggggtgacaattctctccgatctctcacgatccaaccagatagttga	CRISPR spacer
cgctcggggtgacaattctctccgatctctcacgatccaaccagatggttga	Protospacer
**********************************************.*****

333. spacer 54.2|2919115|18|NC_009767|CRT matches to position: 2913747-2913764, mismatch: 1, identity: 0.944

ctcaccccgcgccttgtc	CRISPR spacer
ctcaccccgcgcctcgtc	Protospacer
**************.***

334. spacer 54.3|2919178|18|NC_009767|CRT matches to position: 3414166-3414183, mismatch: 1, identity: 0.944

ctcccctctcaccccgcg	CRISPR spacer
ctcgcctctcaccccgcg	Protospacer
*** **************

335. spacer 54.3|2919178|18|NC_009767|CRT matches to position: 3414208-3414225, mismatch: 1, identity: 0.944

ctcccctctcaccccgcg	CRISPR spacer
ctcgcctctcaccccgcg	Protospacer
*** **************

336. spacer 54.4|2919241|18|NC_009767|CRT matches to position: 2913747-2913764, mismatch: 1, identity: 0.944

ctcaccccgcgccttgtc	CRISPR spacer
ctcaccccgcgcctcgtc	Protospacer
**************.***

337. spacer 85.1|4732841|27|NC_009767|CRISPRCasFinder matches to position: 4769395-4769421, mismatch: 1, identity: 0.963

ccgccccaacgagtcatcgcgcgccgc	CRISPR spacer
ccgccccaccgagtcatcgcgcgccgc	Protospacer
******** ******************

338. spacer 85.1|4732841|27|NC_009767|CRISPRCasFinder matches to position: 4769494-4769520, mismatch: 1, identity: 0.963

ccgccccaacgagtcatcgcgcgccgc	CRISPR spacer
ccgccccaccgagtcatcgcgcgccgc	Protospacer
******** ******************

339. spacer 85.1|4732841|27|NC_009767|CRISPRCasFinder matches to position: 4769544-4769570, mismatch: 1, identity: 0.963

ccgccccaacgagtcatcgcgcgccgc	CRISPR spacer
ccgccccaccgagtcatcgcgcgccgc	Protospacer
******** ******************

340. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4740219-4740246, mismatch: 1, identity: 0.964

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggcgaga	Protospacer
************************* **

341. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 5451963-5451990, mismatch: 1, identity: 0.964

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcattggtggcgcga	Protospacer
****************** *********

342. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 5452683-5452710, mismatch: 1, identity: 0.964

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcattggtggcgcga	Protospacer
****************** *********

343. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 5452823-5452850, mismatch: 1, identity: 0.964

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcattggtggcgcga	Protospacer
****************** *********

344. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 3573657-3573684, mismatch: 1, identity: 0.964

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggcgaga	Protospacer
************************* **

345. spacer 98.2|5453194|34|NC_009767|CRT matches to position: 5451822-5451855, mismatch: 1, identity: 0.971

tatctcgcaacgaggcgcgcggcgcgcggcgcgc	CRISPR spacer
tatctcgcaacgaggcgcgaggcgcgcggcgcgc	Protospacer
******************* **************

346. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 961195-961215, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgccttgcccct	Protospacer
**************.** ***

347. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 1505394-1505414, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

348. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 1505574-1505594, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

349. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2243785-2243805, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggctcctcgcgcct	Protospacer
** ******* **********

350. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4754512-4754532, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

351. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4754800-4754820, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

352. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4754868-4754888, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

353. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4755080-4755100, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

354. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4755148-4755168, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

355. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4755216-4755236, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

356. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4755520-4755540, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

357. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4755588-4755608, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

358. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4930247-4930267, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

359. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540087-5540107, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

360. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540225-5540245, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

361. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540515-5540535, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

362. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540584-5540604, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

363. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540653-5540673, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

364. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540715-5540735, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

365. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540784-5540804, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

366. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540853-5540873, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

367. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540922-5540942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

368. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5540991-5541011, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

369. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2197401-2197421, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

370. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2197829-2197849, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

371. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2197912-2197932, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

372. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2238503-2238523, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcccctcgcgcct	Protospacer
******* ** **********

373. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2352841-2352861, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

374. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 2352919-2352939, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

375. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4174050-4174070, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggtgcctcgcgcct	Protospacer
** ******.***********

376. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4174128-4174148, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgccttgcgcct	Protospacer
** ***********.******

377. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4174236-4174256, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcacct	Protospacer
** **************.***

378. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 4904354-4904374, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

379. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5263758-5263778, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

380. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5263884-5263904, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

381. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5264010-5264030, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

382. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5264104-5264124, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

383. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5264356-5264376, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

384. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5264443-5264463, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

385. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5264530-5264550, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

386. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5264789-5264809, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

387. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5264922-5264942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

388. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5265094-5265114, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

389. spacer 21.1|1001152|21|NC_009767|CRT matches to position: 5452066-5452086, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

390. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 961195-961215, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgccttgcccct	Protospacer
**************.** ***

391. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 1505394-1505414, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

392. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 1505574-1505594, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

393. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2243785-2243805, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggctcctcgcgcct	Protospacer
** ******* **********

394. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4754512-4754532, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

395. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4754800-4754820, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

396. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4754868-4754888, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

397. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4755080-4755100, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

398. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4755148-4755168, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

399. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4755216-4755236, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

400. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4755520-4755540, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

401. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4755588-4755608, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

402. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4930247-4930267, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

403. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540087-5540107, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

404. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540225-5540245, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

405. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540515-5540535, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

406. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540584-5540604, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

407. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540653-5540673, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

408. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540715-5540735, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

409. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540784-5540804, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

410. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540853-5540873, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

411. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540922-5540942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

412. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5540991-5541011, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

413. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2197401-2197421, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

414. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2197829-2197849, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

415. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2197912-2197932, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

416. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2238503-2238523, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcccctcgcgcct	Protospacer
******* ** **********

417. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2352841-2352861, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

418. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 2352919-2352939, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

419. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4174050-4174070, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggtgcctcgcgcct	Protospacer
** ******.***********

420. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4174128-4174148, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgccttgcgcct	Protospacer
** ***********.******

421. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4174236-4174256, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcacct	Protospacer
** **************.***

422. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 4904354-4904374, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

423. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5263758-5263778, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

424. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5263884-5263904, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

425. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5264010-5264030, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

426. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5264104-5264124, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

427. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5264356-5264376, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

428. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5264443-5264463, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

429. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5264530-5264550, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

430. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5264789-5264809, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

431. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5264922-5264942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

432. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5265094-5265114, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

433. spacer 21.2|1001207|21|NC_009767|CRT matches to position: 5452066-5452086, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

434. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 24412-24432, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcgcccct	Protospacer
** ************** ***

435. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 24481-24501, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcgcccct	Protospacer
** ************** ***

436. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 472430-472450, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

437. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 472512-472532, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

438. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 472594-472614, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

439. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 472684-472704, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

440. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 472788-472808, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

441. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 472899-472919, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

442. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 472988-473008, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

443. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 473077-473097, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

444. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 473183-473203, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

445. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 473266-473286, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

446. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 473356-473376, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

447. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 473446-473466, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

448. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 473535-473555, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

449. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 473624-473644, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

450. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 473713-473733, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

451. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 473802-473822, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

452. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 473906-473926, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

453. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 474017-474037, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

454. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 474100-474120, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

455. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 474190-474210, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

456. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 474279-474299, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

457. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 474368-474388, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

458. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 474479-474499, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtcccgcgcgcct	Protospacer
*********.*** *******

459. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 960663-960683, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
********** *******.**

460. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 960726-960746, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
********** ****.*****

461. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 960810-960830, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
********** *******.**

462. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 960978-960998, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgtct	Protospacer
********** *******.**

463. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 961146-961166, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
********** *** ******

464. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 1505088-1505108, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
********** ****.*****

465. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 1505318-1505338, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
********** ****.*****

466. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 1505484-1505504, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
********** ****.*****

467. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 1505636-1505656, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
********** ****.*****

468. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 1629689-1629709, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcgcccct	Protospacer
** ************** ***

469. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2243646-2243666, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******* **********

470. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2243785-2243805, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggctcctcgcgcct	Protospacer
** *******.**********

471. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2244109-2244129, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

472. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2632923-2632943, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggccccgctcgcct	Protospacer
************* * *****

473. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2633165-2633185, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggccccgctcgcct	Protospacer
************* * *****

474. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2633241-2633261, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggccccgctcgcct	Protospacer
************* * *****

475. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2633317-2633337, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggccccgctcgcct	Protospacer
************* * *****

476. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 3573694-3573714, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctctcgcct	Protospacer
********* ***** *****

477. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 3573765-3573785, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctctcgcct	Protospacer
********* ***** *****

478. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 3669872-3669892, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

479. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 3669927-3669947, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

480. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 3678833-3678853, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atcgtcgggtccctcgcgcct	Protospacer
** ******.***********

481. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 3679036-3679056, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atcgtcgggtccctcgcgcct	Protospacer
** ******.***********

482. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 3679231-3679251, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtccctcgcgcct	Protospacer
** ******.***********

483. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 3980672-3980692, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggttgggcgcctcgcgcct	Protospacer
*****.**** **********

484. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4668076-4668096, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacccct	Protospacer
***************.* ***

485. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4668166-4668186, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacccct	Protospacer
***************.* ***

486. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4668256-4668276, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacccct	Protospacer
***************.* ***

487. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4668346-4668366, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacccct	Protospacer
***************.* ***

488. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4668436-4668456, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacccct	Protospacer
***************.* ***

489. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4668526-4668546, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacccct	Protospacer
***************.* ***

490. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4668616-4668636, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacccct	Protospacer
***************.* ***

491. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4753953-4753973, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcacct	Protospacer
********* *******.***

492. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4754064-4754084, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcacct	Protospacer
********* *******.***

493. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4754140-4754160, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcacct	Protospacer
********* *******.***

494. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4754444-4754464, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcacct	Protospacer
********* *******.***

495. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4754580-4754600, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcacct	Protospacer
********* *******.***

496. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4754656-4754676, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcacct	Protospacer
********* *******.***

497. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4754732-4754752, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcacct	Protospacer
********* *******.***

498. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4754936-4754956, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcacct	Protospacer
********* *******.***

499. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4755012-4755032, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcacct	Protospacer
********* *******.***

500. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4755656-4755676, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcacct	Protospacer
********* *******.***

501. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4930482-4930502, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcccct	Protospacer
********* ******* ***

502. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4930728-4930748, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcccct	Protospacer
********* ******* ***

503. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5540156-5540176, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtgcctcgcgcct	Protospacer
*********. **********

504. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5683927-5683947, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcccct	Protospacer
********* ******* ***

505. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 5684356-5684376, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcccct	Protospacer
********* ******* ***

506. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 982549-982569, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtccctcgcgcct	Protospacer
** ******.***********

507. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 1498785-1498805, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcacgcct	Protospacer
*********.*****.*****

508. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 1498847-1498867, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcacgcct	Protospacer
*********.*****.*****

509. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2038314-2038334, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* ** **********

510. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2038369-2038389, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* ** **********

511. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2038590-2038610, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* ** **********

512. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2197470-2197490, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
********** **** *****

513. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2197539-2197559, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
********** **** *****

514. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2197608-2197628, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
********** **** *****

515. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2197677-2197697, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
********** **** *****

516. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2197746-2197766, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctctcgcct	Protospacer
********** **** *****

517. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2198087-2198107, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctggcgcct	Protospacer
********** *** ******

518. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2238606-2238626, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcaagcccctcgcgcct	Protospacer
******..*************

519. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2238730-2238750, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcaagcccctcgcgcct	Protospacer
******..*************

520. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2239301-2239321, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcaagcccctcgcgcct	Protospacer
******..*************

521. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2239363-2239383, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcaagcccctcgcgcct	Protospacer
******..*************

522. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2239798-2239818, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgcgcccctcgcccct	Protospacer
******* ********* ***

523. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2245996-2246016, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

524. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2246177-2246197, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

525. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2246323-2246343, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******* **********

526. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2246441-2246461, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

527. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2246517-2246537, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

528. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2246593-2246613, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

529. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2246669-2246689, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

530. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2246745-2246765, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

531. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2298712-2298732, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcgtgcct	Protospacer
** *************.****

532. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2681516-2681536, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgcgcgcctcgcgcct	Protospacer
******* ** **********

533. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2681580-2681600, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
********** .*********

534. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2681644-2681664, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
********** .*********

535. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 2681796-2681816, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgtctcgcgcct	Protospacer
********** .*********

536. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4174734-4174754, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcgcct	Protospacer
** ******* **********

537. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4614573-4614593, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcccccct	Protospacer
*************** * ***

538. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4740099-4740119, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcccct	Protospacer
*********.******* ***

539. spacer 21.4|1001331|21|NC_009767|CRT matches to position: 4740272-4740292, mismatch: 2, identity: 0.905

atggtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcccct	Protospacer
*********.******* ***

540. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 961195-961215, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgccttgcccct	Protospacer
**************.** ***

541. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 1505394-1505414, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

542. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 1505574-1505594, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

543. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2243785-2243805, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggctcctcgcgcct	Protospacer
** ******* **********

544. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4754512-4754532, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

545. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4754800-4754820, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

546. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4754868-4754888, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

547. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4755080-4755100, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

548. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4755148-4755168, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

549. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4755216-4755236, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

550. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4755520-4755540, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

551. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4755588-4755608, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

552. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4930247-4930267, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

553. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540087-5540107, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

554. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540225-5540245, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

555. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540515-5540535, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

556. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540584-5540604, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

557. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540653-5540673, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

558. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540715-5540735, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

559. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540784-5540804, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

560. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540853-5540873, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

561. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540922-5540942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

562. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5540991-5541011, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

563. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2197401-2197421, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

564. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2197829-2197849, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

565. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2197912-2197932, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

566. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2238503-2238523, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcccctcgcgcct	Protospacer
******* ** **********

567. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2352841-2352861, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

568. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 2352919-2352939, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

569. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4174050-4174070, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggtgcctcgcgcct	Protospacer
** ******.***********

570. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4174128-4174148, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgccttgcgcct	Protospacer
** ***********.******

571. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4174236-4174256, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcacct	Protospacer
** **************.***

572. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 4904354-4904374, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

573. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5263758-5263778, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

574. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5263884-5263904, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

575. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5264010-5264030, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

576. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5264104-5264124, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

577. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5264356-5264376, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

578. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5264443-5264463, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

579. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5264530-5264550, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

580. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5264789-5264809, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

581. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5264922-5264942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

582. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5265094-5265114, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

583. spacer 21.5|1001386|21|NC_009767|CRT matches to position: 5452066-5452086, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

584. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 961195-961215, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgccttgcccct	Protospacer
**************.** ***

585. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 1505394-1505414, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

586. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 1505574-1505594, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

587. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2243785-2243805, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggctcctcgcgcct	Protospacer
** ******* **********

588. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4754512-4754532, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

589. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4754800-4754820, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

590. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4754868-4754888, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

591. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4755080-4755100, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

592. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4755148-4755168, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

593. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4755216-4755236, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

594. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4755520-4755540, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

595. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4755588-4755608, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

596. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4930247-4930267, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

597. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540087-5540107, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

598. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540225-5540245, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

599. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540515-5540535, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

600. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540584-5540604, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

601. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540653-5540673, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

602. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540715-5540735, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

603. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540784-5540804, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

604. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540853-5540873, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

605. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540922-5540942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

606. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5540991-5541011, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

607. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2197401-2197421, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

608. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2197829-2197849, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

609. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2197912-2197932, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

610. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2238503-2238523, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcccctcgcgcct	Protospacer
******* ** **********

611. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2352841-2352861, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

612. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 2352919-2352939, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

613. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4174050-4174070, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggtgcctcgcgcct	Protospacer
** ******.***********

614. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4174128-4174148, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgccttgcgcct	Protospacer
** ***********.******

615. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4174236-4174256, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcacct	Protospacer
** **************.***

616. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 4904354-4904374, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

617. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5263758-5263778, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

618. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5263884-5263904, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

619. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5264010-5264030, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

620. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5264104-5264124, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

621. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5264356-5264376, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

622. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5264443-5264463, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

623. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5264530-5264550, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

624. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5264789-5264809, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

625. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5264922-5264942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

626. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5265094-5265114, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

627. spacer 21.6|1001441|21|NC_009767|CRT matches to position: 5452066-5452086, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

628. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 711354-711374, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggaccctcttgcct	Protospacer
*********  **********

629. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 711451-711471, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggaccctcttgcct	Protospacer
*********  **********

630. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 960726-960746, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
*************** .****

631. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 1002207-1002227, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

632. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 1505088-1505108, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
*************** .****

633. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 1505318-1505338, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
*************** .****

634. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 1505484-1505504, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
*************** .****

635. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 1505636-1505656, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
*************** .****

636. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 3980734-3980754, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

637. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 3980964-3980984, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

638. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5539797-5539817, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

639. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5684232-5684252, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggaccctcttgcct	Protospacer
*********  **********

640. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 2197401-2197421, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
****************..***

641. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 2197829-2197849, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
****************..***

642. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 2197912-2197932, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
****************..***

643. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 4711510-4711530, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

644. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 4740397-4740417, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

645. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5263758-5263778, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

646. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5263884-5263904, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

647. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5264010-5264030, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

648. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5264104-5264124, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

649. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5264356-5264376, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

650. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5264443-5264463, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

651. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5264530-5264550, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

652. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5264789-5264809, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

653. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5264922-5264942, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

654. spacer 21.8|1001579|21|NC_009767|CRT matches to position: 5265094-5265114, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

655. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 961195-961215, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgccttgcccct	Protospacer
**************.** ***

656. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 1505394-1505414, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

657. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 1505574-1505594, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

658. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2243785-2243805, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggctcctcgcgcct	Protospacer
** ******* **********

659. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4754512-4754532, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

660. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4754800-4754820, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

661. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4754868-4754888, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

662. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4755080-4755100, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

663. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4755148-4755168, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

664. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4755216-4755236, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

665. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4755520-4755540, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

666. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4755588-4755608, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

667. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4930247-4930267, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

668. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540087-5540107, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

669. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540225-5540245, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

670. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540515-5540535, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

671. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540584-5540604, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

672. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540653-5540673, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

673. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540715-5540735, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

674. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540784-5540804, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

675. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540853-5540873, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

676. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540922-5540942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

677. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5540991-5541011, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

678. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2197401-2197421, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

679. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2197829-2197849, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

680. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2197912-2197932, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

681. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2238503-2238523, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcccctcgcgcct	Protospacer
******* ** **********

682. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2352841-2352861, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

683. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 2352919-2352939, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

684. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4174050-4174070, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggtgcctcgcgcct	Protospacer
** ******.***********

685. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4174128-4174148, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgccttgcgcct	Protospacer
** ***********.******

686. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4174236-4174256, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcacct	Protospacer
** **************.***

687. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 4904354-4904374, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

688. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5263758-5263778, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

689. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5263884-5263904, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

690. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5264010-5264030, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

691. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5264104-5264124, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

692. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5264356-5264376, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

693. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5264443-5264463, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

694. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5264530-5264550, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

695. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5264789-5264809, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

696. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5264922-5264942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

697. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5265094-5265114, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

698. spacer 21.9|1001634|21|NC_009767|CRT matches to position: 5452066-5452086, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

699. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 711354-711374, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggaccctcttgcct	Protospacer
*********  **********

700. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 711451-711471, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggaccctcttgcct	Protospacer
*********  **********

701. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 960726-960746, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
*************** .****

702. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 1002207-1002227, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

703. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 1505088-1505108, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
*************** .****

704. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 1505318-1505338, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
*************** .****

705. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 1505484-1505504, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
*************** .****

706. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 1505636-1505656, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcacgcct	Protospacer
*************** .****

707. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 3980734-3980754, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

708. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 3980964-3980984, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

709. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5539797-5539817, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

710. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5684232-5684252, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggaccctcttgcct	Protospacer
*********  **********

711. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 2197401-2197421, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
****************..***

712. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 2197829-2197849, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
****************..***

713. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 2197912-2197932, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
****************..***

714. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 4711510-4711530, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

715. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 4740397-4740417, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
*************** .****

716. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5263758-5263778, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

717. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5263884-5263904, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

718. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5264010-5264030, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

719. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5264104-5264124, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

720. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5264356-5264376, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

721. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5264443-5264463, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

722. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5264530-5264550, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

723. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5264789-5264809, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

724. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5264922-5264942, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

725. spacer 21.10|1001689|21|NC_009767|CRT matches to position: 5265094-5265114, mismatch: 2, identity: 0.905

atggtcgggcgcctcttgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** *************.****

726. spacer 21.11|1001744|42|NC_009767|CRT matches to position: 5540225-5540266, mismatch: 2, identity: 0.952

atggtcgggcgcctcgcgcctcgcgcctcgcgcctcgcacct	CRISPR spacer
atggtcgggtccctcgcgcctcgcgcctcgcgcctcgcacct	Protospacer
*********. *******************************

727. spacer 21.11|1001744|42|NC_009767|CRT matches to position: 5452492-5452533, mismatch: 2, identity: 0.952

atggtcgggcgcctcgcgcctcgcgcctcgcgcctcgcacct	CRISPR spacer
atggtcgggcccctcgcgccgcgcgcctcgcgcctcgcacct	Protospacer
********** ********* *********************

728. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 961195-961215, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgccttgcccct	Protospacer
**************.** ***

729. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 1505394-1505414, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

730. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 1505574-1505594, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

731. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2243785-2243805, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggctcctcgcgcct	Protospacer
** ******* **********

732. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4754512-4754532, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

733. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4754800-4754820, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

734. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4754868-4754888, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

735. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4755080-4755100, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

736. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4755148-4755168, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

737. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4755216-4755236, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

738. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4755520-4755540, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

739. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4755588-4755608, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

740. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4930247-4930267, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

741. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540087-5540107, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

742. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540225-5540245, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

743. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540515-5540535, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

744. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540584-5540604, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

745. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540653-5540673, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

746. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540715-5540735, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

747. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540784-5540804, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

748. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540853-5540873, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

749. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540922-5540942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

750. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5540991-5541011, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

751. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2197401-2197421, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

752. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2197829-2197849, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

753. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2197912-2197932, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcgcctctcacct	Protospacer
*************** *.***

754. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2238503-2238523, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgcgcccctcgcgcct	Protospacer
******* ** **********

755. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2352841-2352861, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

756. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 2352919-2352939, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
*********  **********

757. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4174050-4174070, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggtgcctcgcgcct	Protospacer
** ******.***********

758. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4174128-4174148, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgccttgcgcct	Protospacer
** ***********.******

759. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4174236-4174256, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcacct	Protospacer
** **************.***

760. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 4904354-4904374, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
********** ****.*****

761. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5263758-5263778, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

762. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5263884-5263904, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

763. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5264010-5264030, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

764. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5264104-5264124, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

765. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5264356-5264376, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

766. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5264443-5264463, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

767. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5264530-5264550, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

768. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5264789-5264809, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

769. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5264922-5264942, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

770. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5265094-5265114, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
** ************ *****

771. spacer 21.13|1001886|21|NC_009767|CRT matches to position: 5452066-5452086, mismatch: 2, identity: 0.905

atggtcgggcgcctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
*********. **********

772. spacer 21.14|1001941|35|NC_009767|CRT matches to position: 4711496-4711530, mismatch: 2, identity: 0.943

atggtcgggcgcctcgcgcctcgcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcctcgcgcctcgcgcct	Protospacer
***************************** .****

773. spacer 21.14|1001941|35|NC_009767|CRT matches to position: 4740383-4740417, mismatch: 2, identity: 0.943

atggtcgggcgcctcgcgcctcgcgcctcttgcct	CRISPR spacer
atggtcgggcgcctcgcgcctcgcccctctcgcct	Protospacer
************************ *****.****

774. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 19452-19472, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcacccct	Protospacer
***************.* ***

775. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 19787-19807, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcacccct	Protospacer
***************.* ***

776. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 20105-20125, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcacccct	Protospacer
***************.* ***

777. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 20352-20372, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcacccct	Protospacer
***************.* ***

778. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 20449-20469, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctcacccct	Protospacer
***************.* ***

779. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 24115-24135, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcccct	Protospacer
********* ******* ***

780. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 25068-25088, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcccct	Protospacer
********* ******* ***

781. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 25149-25169, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcccct	Protospacer
********* ******* ***

782. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 1002207-1002227, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
** ******* **********

783. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 1505394-1505414, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
** ************.*****

784. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 1505574-1505594, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
** ************.*****

785. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2244192-2244212, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctctcgcct	Protospacer
********* ***** *****

786. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2631901-2631921, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

787. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2631963-2631983, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

788. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2632025-2632045, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

789. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2632294-2632314, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

790. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2632426-2632446, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

791. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2632488-2632508, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

792. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2632847-2632867, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

793. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 3678833-3678853, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atcgtcgggtccctcgcgcct	Protospacer
**.******.***********

794. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 3679036-3679056, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atcgtcgggtccctcgcgcct	Protospacer
**.******.***********

795. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 3980734-3980754, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
** ******* **********

796. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 3980964-3980984, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
** ******* **********

797. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4105743-4105763, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtctctcgcgcct	Protospacer
*********.*.*********

798. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4105812-4105832, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtctctcgcgcct	Protospacer
*********.*.*********

799. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4390545-4390565, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctctcacct	Protospacer
*************** *.***

800. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4390614-4390634, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctctcacct	Protospacer
*************** *.***

801. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4390683-4390703, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtcccttgcgcct	Protospacer
*********.****.******

802. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4390745-4390765, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtcccttgcgcct	Protospacer
*********.****.******

803. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4391159-4391179, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggctccttgcgcct	Protospacer
**********.***.******

804. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4754512-4754532, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

805. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4754800-4754820, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

806. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4754868-4754888, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

807. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4755080-4755100, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

808. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4755148-4755168, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

809. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4755216-4755236, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

810. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4755520-4755540, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

811. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4755588-4755608, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

812. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4913566-4913586, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgccgggcccctctcgcct	Protospacer
****.********** *****

813. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4913668-4913688, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgccgggcccctctcgcct	Protospacer
****.********** *****

814. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4921485-4921505, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgccgggaccctcgcgcct	Protospacer
****.**** ***********

815. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4921696-4921716, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgccgggaccctcgcgcct	Protospacer
****.**** ***********

816. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4922212-4922232, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgccgggaccctcgcgcct	Protospacer
****.**** ***********

817. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4930247-4930267, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

818. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4931149-4931169, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcccct	Protospacer
********* ******* ***

819. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5539797-5539817, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
** ******* **********

820. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5540087-5540107, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

821. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5540225-5540245, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

822. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5540515-5540535, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

823. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5540584-5540604, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

824. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5540653-5540673, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

825. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5540715-5540735, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

826. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5540784-5540804, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

827. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5540853-5540873, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

828. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5540922-5540942, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

829. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5540991-5541011, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

830. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 454803-454823, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtccggcccctcgcccct	Protospacer
****** ********** ***

831. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 454941-454961, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtccggcccctcgcccct	Protospacer
****** ********** ***

832. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 455238-455258, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtccggcccctcgcccct	Protospacer
****** ********** ***

833. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 983564-983584, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgccgggcccctctcgcct	Protospacer
****.********** *****

834. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 1628245-1628265, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctctcccct	Protospacer
*************** * ***

835. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 1628328-1628348, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctctcgcct	Protospacer
********* ***** *****

836. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 1628418-1628438, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctctcccct	Protospacer
*************** * ***

837. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 1628681-1628701, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctctcccct	Protospacer
*************** * ***

838. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 1629041-1629061, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcccctctcccct	Protospacer
*************** * ***

839. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2238503-2238523, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgcgcccctcgcgcct	Protospacer
** **** *************

840. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2352280-2352300, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcggacccctctcgcct	Protospacer
********.****** *****

841. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2352365-2352385, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcggacccctctcgcct	Protospacer
********.****** *****

842. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2352534-2352554, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcggacccctctcgcct	Protospacer
********.****** *****

843. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2352672-2352692, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcggacccctctcgcct	Protospacer
********.****** *****

844. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2352763-2352783, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcggacccctctcgcct	Protospacer
********.****** *****

845. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2352841-2352861, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

846. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2352919-2352939, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggaccctcgcgcct	Protospacer
** ****** ***********

847. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2353199-2353219, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcggacccctctcgcct	Protospacer
********.****** *****

848. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2531511-2531531, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

849. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2531629-2531649, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

850. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2531747-2531767, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

851. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2531851-2531871, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

852. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2531948-2531968, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

853. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 2652049-2652069, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggccccgctcgcct	Protospacer
************* * *****

854. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4174050-4174070, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtgcctcgcgcct	Protospacer
*********. **********

855. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4174128-4174148, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgccttgcgcct	Protospacer
********** ***.******

856. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4174236-4174256, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctcgcacct	Protospacer
********** ******.***

857. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4711510-4711530, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
** ******* **********

858. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4740189-4740209, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctctcgcct	Protospacer
********* ***** *****

859. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4740397-4740417, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcgcctcgcgcct	Protospacer
** ******* **********

860. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4887891-4887911, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgccgggcccctctcgcct	Protospacer
****.********** *****

861. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 4904354-4904374, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggcccctcacgcct	Protospacer
** ************.*****

862. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5263758-5263778, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
********** **** *****

863. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5263884-5263904, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
********** **** *****

864. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5264010-5264030, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
********** **** *****

865. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5264104-5264124, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
********** **** *****

866. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5264356-5264376, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
********** **** *****

867. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5264443-5264463, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
********** **** *****

868. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5264530-5264550, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
********** **** *****

869. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5264789-5264809, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
********** **** *****

870. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5264922-5264942, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
********** **** *****

871. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5265094-5265114, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggcgcctctcgcct	Protospacer
********** **** *****

872. spacer 21.15|1002010|21|NC_009767|CRT matches to position: 5452066-5452086, mismatch: 2, identity: 0.905

attgtcgggcccctcgcgcct	CRISPR spacer
atggtcgggtccctcgcgcct	Protospacer
** ******.***********

873. spacer 43.1|2238202|42|NC_009767|CRT matches to position: 2039787-2039828, mismatch: 2, identity: 0.952

ggcgcgaccatggcgtagcgcgagatgtatctcgcatttgta	CRISPR spacer
ggcgcgaccatagcgtagcgcgagatttatctcgcatttgta	Protospacer
***********.************** ***************

874. spacer 43.1|2238202|42|NC_009767|CRT matches to position: 2238788-2238829, mismatch: 2, identity: 0.952

ggcgcgaccatggcgtagcgcgagatgtatctcgcatttgta	CRISPR spacer
ggcttgaccatggcgtagcgcgagatgtatctcgcatttgta	Protospacer
*** .*************************************

875. spacer 43.1|2238202|42|NC_009767|CRT matches to position: 2238898-2238939, mismatch: 2, identity: 0.952

ggcgcgaccatggcgtagcgcgagatgtatctcgcatttgta	CRISPR spacer
ggcttgaccatggcgtagcgcgagatgtatctcgcatttgta	Protospacer
*** .*************************************

876. spacer 43.1|2238202|42|NC_009767|CRT matches to position: 2239070-2239111, mismatch: 2, identity: 0.952

ggcgcgaccatggcgtagcgcgagatgtatctcgcatttgta	CRISPR spacer
ggcttgaccatggcgtagcgcgagatgtatctcgcatttgta	Protospacer
*** .*************************************

877. spacer 43.1|2238202|42|NC_009767|CRT matches to position: 2239373-2239414, mismatch: 2, identity: 0.952

ggcgcgaccatggcgtagcgcgagatgtatctcgcatttgta	CRISPR spacer
ggcttgaccatggcgtagcgcgagatgtatctcgcatttgta	Protospacer
*** .*************************************

878. spacer 43.1|2238202|42|NC_009767|CRT matches to position: 2239504-2239545, mismatch: 2, identity: 0.952

ggcgcgaccatggcgtagcgcgagatgtatctcgcatttgta	CRISPR spacer
ggcttgaccatggcgtagcgcgagatgtatctcgcatttgta	Protospacer
*** .*************************************

879. spacer 43.1|2238202|42|NC_009767|CRT matches to position: 2239642-2239683, mismatch: 2, identity: 0.952

ggcgcgaccatggcgtagcgcgagatgtatctcgcatttgta	CRISPR spacer
ggcttgaccatggcgtagcgcgagatgtatctcgcatttgta	Protospacer
*** .*************************************

880. spacer 43.2|2238280|47|NC_009767|CRT matches to position: 2238790-2238836, mismatch: 2, identity: 0.957

cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	CRISPR spacer
cttgaccatggcgtagcgcgagatgtatctcgcatttgtagcgaggg	Protospacer
************************ ************.*********

881. spacer 43.2|2238280|47|NC_009767|CRT matches to position: 2239072-2239118, mismatch: 2, identity: 0.957

cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	CRISPR spacer
cttgaccatggcgtagcgcgagatgtatctcgcatttgtagcgaggg	Protospacer
************************ ************.*********

882. spacer 43.2|2238280|47|NC_009767|CRT matches to position: 2239506-2239552, mismatch: 2, identity: 0.957

cttgaccatggcgtagcgcgagatttatctcgcatttatagcgaggg	CRISPR spacer
cttgaccatggcgtagcgcgagatgtatctcgcatttgtagcgaggg	Protospacer
************************ ************.*********

883. spacer 43.3|2238363|40|NC_009767|CRT matches to position: 454836-454875, mismatch: 2, identity: 0.95

gatgtatctcgcatttgtagtgaggcgcgaggtgagaggg	CRISPR spacer
gatgtatctcgcatttgtagcgaggggcgaggtgagaggg	Protospacer
********************.**** **************

884. spacer 43.4|2238439|40|NC_009767|CRT matches to position: 2238515-2238554, mismatch: 2, identity: 0.95

cgcgaccatggcgtagcgcaagatgtatctcgcatttgta	CRISPR spacer
cgcgaccatggcgtagcgcgagatgtatctcgcattggta	Protospacer
*******************.**************** ***

885. spacer 85.1|4732841|27|NC_009767|CRISPRCasFinder matches to position: 4767515-4767541, mismatch: 2, identity: 0.926

ccgccccaacgagtcatcgcgcgccgc	CRISPR spacer
ccgccccaccgagtcatcgcgagccgc	Protospacer
******** ************ *****

886. spacer 85.1|4732841|27|NC_009767|CRISPRCasFinder matches to position: 4769444-4769470, mismatch: 2, identity: 0.926

ccgccccaacgagtcatcgcgcgccgc	CRISPR spacer
ccgccccaccgagtcatcgtgcgccgc	Protospacer
******** **********.*******

887. spacer 86.1|4767267|27|NC_009767|CRISPRCasFinder matches to position: 4769345-4769371, mismatch: 2, identity: 0.926

tcacctcaccgagtcatcgcgcgccgc	CRISPR spacer
tcaccccaccgagtcatcgtgcgccgc	Protospacer
*****.*************.*******

888. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 1948406-1948433, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

889. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 3468551-3468578, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

890. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 3468730-3468757, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

891. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 3468909-3468936, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

892. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 3469025-3469052, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

893. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 3469141-3469168, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

894. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 3469373-3469400, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

895. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4709676-4709703, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

896. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4709935-4709962, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

897. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4711293-4711320, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

898. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4740302-4740329, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

899. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 5263788-5263815, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

900. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 25031-25058, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

901. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 3574225-3574252, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatctgtggcgaga	Protospacer
*****************.******* **

902. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4329892-4329919, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

903. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4330052-4330079, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

904. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4330741-4330768, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

905. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4331082-4331109, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

906. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4668399-4668426, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

907. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4668579-4668606, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

908. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4913631-4913658, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

909. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4913793-4913820, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

910. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4921448-4921475, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

911. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4921821-4921848, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

912. spacer 98.1|5453130|28|NC_009767|CRT matches to position: 4922175-4922202, mismatch: 2, identity: 0.929

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
cgagatttatctcgcatttgtggagaga	Protospacer
*********************** * **

913. spacer 98.2|5453194|34|NC_009767|CRT matches to position: 5452424-5452457, mismatch: 2, identity: 0.941

tatctcgcaacgaggcgcgcggcgcgcggcgcgc	CRISPR spacer
tatctcgcaacgaggcgcgaggcgcgaggcgcgc	Protospacer
******************* ****** *******

914. spacer 98.2|5453194|34|NC_009767|CRT matches to position: 5452550-5452583, mismatch: 2, identity: 0.941

tatctcgcaacgaggcgcgcggcgcgcggcgcgc	CRISPR spacer
tatctcgcaacgaggcgcgaggcgcgaggcgcgc	Protospacer
******************* ****** *******

915. spacer 98.2|5453194|34|NC_009767|CRT matches to position: 5452620-5452653, mismatch: 2, identity: 0.941

tatctcgcaacgaggcgcgcggcgcgcggcgcgc	CRISPR spacer
tatctcgcaacgaggcgcgaggcgcgaggcgcgc	Protospacer
******************* ****** *******

916. spacer 37.3|2062676|72|NC_009767|PILER-CR matches to position: 2062132-2062203, mismatch: 12, identity: 0.833

gcctggcggcgcttcggctcctccaggtgggggtccaggtcggccagggcgcaggcgcgc	CRISPR spacer
gcctggcggcgcttcggctcctccaggtgggggtccaggtcggccagggcgcaggcgcgc	Protospacer
************************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_009767_34	34.1|1838296|28|NC_009767|CRT	1838296-1838323	28	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	351107-351134	4	0.857
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	AP018469	Mycobacterium phage Y10 DNA, complete genome, note: sample1	32655-32685	5	0.839
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	AP018470	Mycobacterium phage Y2 DNA, complete genome	32655-32685	5	0.839
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	MT310882	Mycobacterium phage JF1, complete genome	32655-32685	5	0.839
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	AP018471	Mycobacterium phage Y10 DNA, complete genome, note: sample2	32655-32685	5	0.839
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	MK224497	Mycobacterium phage Henu3, complete genome	25499-25529	5	0.839
NC_009767_34	34.1|1838296|28|NC_009767|CRT	1838296-1838323	28	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1023804-1023831	5	0.821
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	924966-925000	5	0.857
NC_009767_40	40.1|2178330|26|NC_009767|PILER-CR	2178330-2178355	26	NZ_AP017976	Microbacterium sp. TPU 3598 plasmid MST3P, complete sequence	1883-1908	5	0.808
NC_009767_67	67.17|3448680|26|NC_009767|CRISPRCasFinder,CRT	3448680-3448705	26	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	381856-381881	5	0.808
NC_009767_67	67.17|3448680|26|NC_009767|CRISPRCasFinder,CRT	3448680-3448705	26	NZ_CP013423	Burkholderia sp. MSMB0852 plasmid pMSMB0852, complete sequence	36538-36563	5	0.808
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	177356-177383	5	0.821
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	12776-12803	5	0.821
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP032688	Rhizobium sp. CCGE531 plasmid pRCCGE531a, complete sequence	246309-246336	5	0.821
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP032693	Rhizobium sp. CCGE532 plasmid pRCCGE532a, complete sequence	246298-246325	5	0.821
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP006987	Rhizobium sp. IE4771 plasmid pRetIE4771a, complete sequence	83320-83347	5	0.821
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	244987-245014	5	0.821
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP017103	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872a, complete sequence	25552-25579	5	0.821
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NC_009508	Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence	22075-22102	5	0.821
NC_009767_12	12.1|708293|34|NC_009767|CRT	708293-708326	34	NC_019746	Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence	194143-194176	6	0.824
NC_009767_12	12.3|708434|34|NC_009767|CRT	708434-708467	34	NC_019746	Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence	194143-194176	6	0.824
NC_009767_34	34.1|1838296|28|NC_009767|CRT	1838296-1838323	28	NZ_CP014597	Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence	207273-207300	6	0.786
NC_009767_34	34.1|1838296|28|NC_009767|CRT	1838296-1838323	28	NZ_CP006370	Aureimonas sp. AU20 plasmid pAU20c, complete sequence	81614-81641	6	0.786
NC_009767_36	36.85|1981741|36|NC_009767|PILER-CR	1981741-1981776	36	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	924966-925001	6	0.833
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	388266-388300	6	0.829
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP011920	Burkholderia cenocepacia strain ST32 plasmid pBCEN1232, complete sequence	120306-120340	6	0.829
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP014598	Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence	22831-22865	6	0.829
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP054033	Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence	90706-90740	6	0.829
NC_009767_36	36.227|1982843|32|NC_009767|CRISPRCasFinder,CRT	1982843-1982874	32	MN329673	Gordonia phage Jabberwocky, complete genome	7247-7278	6	0.812
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_CP010991	Pseudonocardia sp. EC080625-04 plasmid pFRP1-2, complete sequence	61891-61928	6	0.842
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP025584	Paracoccus jeotgali strain CBA4604 plasmid pCBA4604-01, complete sequence	56264-56291	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	393832-393859	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1702819-1702846	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP019318	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-6, complete sequence	12933-12960	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	644754-644781	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	MK310226	Halobacterium virus ChaoS9, complete genome	42056-42083	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	889748-889775	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	309018-309045	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1751821-1751848	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1778458-1778485	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	893393-893420	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	83035-83062	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	CP054917	Streptomyces sp. NA02950 plasmid unnamed, complete sequence	97318-97345	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1809269-1809296	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1838777-1838804	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	434590-434617	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1461619-1461646	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	674869-674896	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1741169-1741196	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	353099-353126	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	237372-237399	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	555458-555485	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1818753-1818780	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	658242-658269	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1526359-1526386	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1759086-1759113	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1753956-1753983	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1824721-1824748	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1345066-1345093	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1755323-1755350	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1830233-1830260	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1824688-1824715	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1732169-1732196	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1809668-1809695	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1823431-1823458	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	CP016641	Mycobacterium sp. djl-10 plasmid djl-10_1, complete sequence	26629-26656	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1838779-1838806	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1718629-1718656	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1732481-1732508	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1809668-1809695	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1823530-1823557	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1732169-1732196	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1719276-1719303	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1731372-1731399	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1809668-1809695	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1809668-1809695	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1809668-1809695	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1823526-1823553	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	222560-222587	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1823515-1823542	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1718652-1718679	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1734301-1734328	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1714940-1714967	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1775996-1776023	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1807984-1808011	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1806983-1807010	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1823515-1823542	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1718652-1718679	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1732480-1732507	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1824512-1824539	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1718652-1718679	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1718652-1718679	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1823526-1823553	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1809673-1809700	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	192347-192374	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1823537-1823564	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1823338-1823365	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	192347-192374	6	0.786
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	KJ410133	Mycobacterium phage Jolie2, complete genome	37552-37579	6	0.786
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1841921-1841950	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1933781-1933810	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1740532-1740561	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1810727-1810756	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1739545-1739574	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1835875-1835904	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1835877-1835906	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1740534-1740563	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1739918-1739947	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1740505-1740534	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1842106-1842135	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1842104-1842133	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1842069-1842098	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	MG592531	Vibrio phage 1.164.O._10N.261.51.A7, partial genome	14079-14108	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	2005816-2005845	6	0.8
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP029835	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence	257652-257681	6	0.8
NC_009767_6	6.1|364383|29|NC_009767|CRISPRCasFinder	364383-364411	29	NZ_CP011045	Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI2, complete sequence	47774-47802	7	0.759
NC_009767_6	6.1|364383|29|NC_009767|CRISPRCasFinder	364383-364411	29	NZ_CP021036	Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI2, complete sequence	46689-46717	7	0.759
NC_009767_9	9.1|567519|32|NC_009767|CRISPRCasFinder	567519-567550	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	635947-635978	7	0.781
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	NZ_CP049245	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed4, complete sequence	141365-141395	7	0.774
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1341984-1342014	7	0.774
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1296232-1296262	7	0.774
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1307659-1307689	7	0.774
NC_009767_12	12.1|708293|34|NC_009767|CRT	708293-708326	34	NC_019746	Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence	194150-194183	7	0.794
NC_009767_12	12.3|708434|34|NC_009767|CRT	708434-708467	34	NC_019746	Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence	194150-194183	7	0.794
NC_009767_21	21.11|1001744|42|NC_009767|CRT	1001744-1001785	42	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1897572-1897613	7	0.833
NC_009767_34	34.1|1838296|28|NC_009767|CRT	1838296-1838323	28	NZ_CP045385	Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence	218880-218907	7	0.75
NC_009767_36	36.85|1981741|36|NC_009767|PILER-CR	1981741-1981776	36	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	388265-388300	7	0.806
NC_009767_36	36.85|1981741|36|NC_009767|PILER-CR	1981741-1981776	36	NZ_CP011920	Burkholderia cenocepacia strain ST32 plasmid pBCEN1232, complete sequence	120306-120341	7	0.806
NC_009767_36	36.177|1979182|36|NC_009767|CRISPRCasFinder,CRT	1979182-1979217	36	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	141692-141727	7	0.806
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP032327	Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence	75265-75299	7	0.8
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP007798	Azospirillum brasilense strain Az39 plasmid AbAZ39_p5, complete sequence	14925-14959	7	0.8
NC_009767_67	67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3448155-3448192	38	MK801725	Gordonia phage Yago84, complete genome	57632-57669	7	0.816
NC_009767_67	67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT	3448743-3448779	37	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	548705-548741	7	0.811
NC_009767_67	67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT	3448743-3448779	37	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1368212-1368248	7	0.811
NC_009767_67	67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT	3448743-3448779	37	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	550198-550234	7	0.811
NC_009767_67	67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT	3448743-3448779	37	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	549293-549329	7	0.811
NC_009767_67	67.44|3450685|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450685-3450722	38	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	41061-41098	7	0.816
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NC_048019	Gordonia phage Ruthy, complete genome	14052-14089	7	0.816
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	774004-774041	7	0.816
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	377437-377474	7	0.816
NC_009767_71	71.1|3707738|34|NC_009767|CRISPRCasFinder	3707738-3707771	34	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	407810-407843	7	0.794
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP054603	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed4, complete sequence	92806-92833	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1170959-1170986	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1247940-1247967	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	60001-60028	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	591089-591116	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1525295-1525322	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1541301-1541328	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	152367-152394	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP019037	Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence	257595-257622	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	710835-710862	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP024896	Amycolatopsis sp. AA4 plasmid unnamed2, complete sequence	56393-56420	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	307653-307680	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5491144-5491171	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NC_009939	Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence	119011-119038	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP040820	Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence	70780-70807	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	167219-167246	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	MH153804	Rhodococcus phage Jace, complete genome	20920-20947	7	0.75
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	JX042579	Mycobacterium virus MacnCheese, complete genome	24844-24871	7	0.75
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	525187-525216	7	0.767
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	MH588544	Caulobacter phage CcrBL10, complete genome	116286-116315	7	0.767
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1119226-1119255	7	0.767
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	177119-177148	7	0.767
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	332988-333017	7	0.767
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NC_012858	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence	374577-374606	7	0.767
NC_009767_6	6.1|364383|29|NC_009767|CRISPRCasFinder	364383-364411	29	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	1724385-1724413	8	0.724
NC_009767_6	6.1|364383|29|NC_009767|CRISPRCasFinder	364383-364411	29	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	1902921-1902949	8	0.724
NC_009767_9	9.1|567519|32|NC_009767|CRISPRCasFinder	567519-567550	32	NZ_CP010957	Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence	168196-168227	8	0.75
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	NZ_CP032687	Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence	400212-400242	8	0.742
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	NC_020061	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence	384145-384175	8	0.742
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1325485-1325515	8	0.742
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	MN234183	Mycobacterium phage Antsirabe, complete genome	1636-1666	8	0.742
NC_009767_12	12.1|708293|34|NC_009767|CRT	708293-708326	34	NZ_CP031094	Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence	21866-21899	8	0.765
NC_009767_12	12.3|708434|34|NC_009767|CRT	708434-708467	34	NZ_CP031094	Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence	21866-21899	8	0.765
NC_009767_21	21.14|1001941|35|NC_009767|CRT	1001941-1001975	35	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1897579-1897613	8	0.771
NC_009767_36	36.2|1975664|36|NC_009767|PILER-CR	1975664-1975699	36	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	457442-457477	8	0.778
NC_009767_36	36.2|1975664|36|NC_009767|PILER-CR	1975664-1975699	36	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	591367-591402	8	0.778
NC_009767_36	36.50|1979181|37|NC_009767|PILER-CR	1979181-1979217	37	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	141691-141727	8	0.784
NC_009767_36	36.85|1981741|36|NC_009767|PILER-CR	1981741-1981776	36	NZ_CP032327	Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence	75264-75299	8	0.778
NC_009767_36	36.85|1981741|36|NC_009767|PILER-CR	1981741-1981776	36	NZ_CP007798	Azospirillum brasilense strain Az39 plasmid AbAZ39_p5, complete sequence	14924-14959	8	0.778
NC_009767_36	36.102|1982985|36|NC_009767|PILER-CR	1982985-1983020	36	NZ_CP006370	Aureimonas sp. AU20 plasmid pAU20c, complete sequence	123669-123704	8	0.778
NC_009767_36	36.129|1975665|35|NC_009767|CRISPRCasFinder,CRT	1975665-1975699	35	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	457443-457477	8	0.771
NC_009767_36	36.129|1975665|35|NC_009767|CRISPRCasFinder,CRT	1975665-1975699	35	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	591368-591402	8	0.771
NC_009767_36	36.161|1978011|36|NC_009767|CRISPRCasFinder,CRT	1978011-1978046	36	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	3847-3882	8	0.778
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1015334-1015370	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	439082-439118	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1335954-1335990	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	603032-603068	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1699063-1699099	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1418331-1418367	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1620347-1620383	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1699030-1699066	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1697824-1697860	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1697860-1697896	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1697860-1697896	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	346952-346988	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1697849-1697885	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1697849-1697885	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1698850-1698886	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1697860-1697896	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1697871-1697907	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1697672-1697708	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1618898-1618934	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	207101-207137	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1684847-1684883	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1615574-1615610	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1694335-1694371	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1401947-1401983	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1626052-1626088	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1653494-1653530	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1620870-1620906	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1705815-1705851	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1596616-1596652	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1597262-1597298	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1596638-1596674	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1609889-1609925	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1590536-1590572	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1645531-1645567	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1683572-1683608	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1596638-1596674	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1596638-1596674	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1596638-1596674	8	0.784
NC_009767_36	36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT	1978596-1978632	37	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1222689-1222725	8	0.784
NC_009767_36	36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT	1981158-1981193	36	NC_017533	Pantoea ananatis AJ13355 plasmid pEA320, complete sequence	255626-255661	8	0.778
NC_009767_36	36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT	1981158-1981193	36	NC_016817	Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence	183761-183796	8	0.778
NC_009767_36	36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT	1981158-1981193	36	NZ_CP020944	Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence	168490-168525	8	0.778
NC_009767_36	36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT	1981158-1981193	36	NZ_CP014208	Pantoea ananatis strain R100 plasmid, complete sequence	201428-201463	8	0.778
NC_009767_36	36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT	1981158-1981193	36	NC_017553	Pantoea ananatis PA13 plasmid PAGR_p, complete sequence	168575-168610	8	0.778
NC_009767_36	36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT	1981158-1981193	36	CP054909	Pantoea ananatis strain FDAARGOS_680 plasmid unnamed1, complete sequence	67578-67613	8	0.778
NC_009767_36	36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT	1981158-1981193	36	NZ_CP022429	Pantoea ananatis strain YJ76 plasmid p_unamed1	13460-13495	8	0.778
NC_009767_36	36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT	1981158-1981193	36	NZ_CP022429	Pantoea ananatis strain YJ76 plasmid p_unamed1	327374-327409	8	0.778
NC_009767_36	36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT	1981158-1981193	36	NZ_CP035036	Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence	97808-97843	8	0.778
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	301758-301792	8	0.771
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	284811-284845	8	0.771
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP033227	Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence	182481-182515	8	0.771
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	240904-240938	8	0.771
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP031082	Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence	78675-78709	8	0.771
NC_009767_36	36.227|1982843|32|NC_009767|CRISPRCasFinder,CRT	1982843-1982874	32	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	25329-25360	8	0.75
NC_009767_36	36.229|1982986|35|NC_009767|CRISPRCasFinder,CRT	1982986-1983020	35	NZ_CP006370	Aureimonas sp. AU20 plasmid pAU20c, complete sequence	123669-123703	8	0.771
NC_009767_36	36.232|1983204|36|NC_009767|CRISPRCasFinder,CRT	1983204-1983239	36	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	76116-76151	8	0.778
NC_009767_49	49.6|2544558|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT	2544558-2544597	40	NZ_CP040820	Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence	160064-160103	8	0.8
NC_009767_67	67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT	3448743-3448779	37	NZ_CP018064	Rhodococcus sp. 2G plasmid p1, complete sequence	69362-69398	8	0.784
NC_009767_67	67.42|3450537|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450537-3450572	36	NC_012520	Rhodococcus opacus B4 plasmid pROB01, complete sequence	283109-283144	8	0.778
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	244762-244799	8	0.789
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	388335-388372	8	0.789
NC_009767_67	67.79|3451516|36|NC_009767|PILER-CR	3451516-3451551	36	NZ_CP045310	Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence	3184-3219	8	0.778
NC_009767_67	67.79|3451516|36|NC_009767|PILER-CR	3451516-3451551	36	NZ_CP045310	Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence	9587-9622	8	0.778
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1314695-1314722	8	0.714
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	817681-817708	8	0.714
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	NZ_CP026517	Deinococcus sp. NW-56 plasmid unnamed1, complete sequence	315156-315183	8	0.714
NC_009767_73	73.1|3771177|28|NC_009767|CRISPRCasFinder	3771177-3771204	28	JQ680373	Unidentified phage clone 2209_scaffold64 genomic sequence	26700-26727	8	0.714
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1790284-1790313	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	2018780-2018809	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1732570-1732599	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	290907-290936	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	170882-170911	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP015738	Shinella sp. HZN7 plasmid pShin-02, complete sequence	130628-130657	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1790420-1790449	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1732574-1732603	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1732568-1732597	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	585417-585446	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP023551	Rhodobacter sp. CZR27 plasmid unnamed3, complete sequence	37815-37844	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1789956-1789985	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1789900-1789929	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1953333-1953362	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	230311-230340	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	142207-142236	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	73657-73686	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	364274-364303	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	230034-230063	8	0.733
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	KP966108	Burkholderia phage vB_BceM_AP3, complete genome	16996-17025	8	0.733
NC_009767_82	82.39|4300103|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4300103-4300137	35	MK801721	Gordonia phage William, complete genome	41997-42031	8	0.771
NC_009767_82	82.39|4300103|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4300103-4300137	35	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	295388-295422	8	0.771
NC_009767_82	82.131|4306762|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4306762-4306795	34	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	220109-220142	8	0.765
NC_009767_82	82.151|4308212|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4308212-4308246	35	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	532492-532526	8	0.771
NC_009767_98	98.1|5453130|28|NC_009767|CRT	5453130-5453157	28	MG720309	Vibrio phage Ares1, complete genome	1880-1907	8	0.714
NC_009767_98	98.2|5453194|34|NC_009767|CRT	5453194-5453227	34	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	107141-107174	8	0.765
NC_009767_3	3.1|288119|32|NC_009767|CRISPRCasFinder	288119-288150	32	NZ_CP043507	Acetobacter sp. KACC 21233 plasmid unnamed1, complete sequence	71664-71695	9	0.719
NC_009767_10	10.1|665221|31|NC_009767|CRISPRCasFinder	665221-665251	31	NZ_CP040762	Paracoccus sp. 2251 plasmid unnamed2, complete sequence	169938-169968	9	0.71
NC_009767_17	17.1|951666|37|NC_009767|CRISPRCasFinder	951666-951702	37	NC_042342	Pseudomonas virus H66, complete genome	57940-57976	9	0.757
NC_009767_21	21.11|1001744|42|NC_009767|CRT	1001744-1001785	42	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1897558-1897599	9	0.786
NC_009767_21	21.11|1001744|42|NC_009767|CRT	1001744-1001785	42	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1897565-1897606	9	0.786
NC_009767_21	21.11|1001744|42|NC_009767|CRT	1001744-1001785	42	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1897551-1897592	9	0.786
NC_009767_21	21.11|1001744|42|NC_009767|CRT	1001744-1001785	42	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1897579-1897620	9	0.786
NC_009767_21	21.12|1001820|32|NC_009767|CRT	1001820-1001851	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	173765-173796	9	0.719
NC_009767_21	21.14|1001941|35|NC_009767|CRT	1001941-1001975	35	NZ_CP011518	Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence	9567-9601	9	0.743
NC_009767_21	21.14|1001941|35|NC_009767|CRT	1001941-1001975	35	NC_019746	Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence	194150-194184	9	0.743
NC_009767_21	21.17|1002141|32|NC_009767|CRT	1002141-1002172	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	173765-173796	9	0.719
NC_009767_35	35.1|1960436|33|NC_009767|CRISPRCasFinder	1960436-1960468	33	HQ332138	Paenibacillus phage PG1 genomic sequence	26943-26975	9	0.727
NC_009767_36	36.34|1978010|37|NC_009767|PILER-CR	1978010-1978046	37	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	3846-3882	9	0.757
NC_009767_36	36.77|1981157|37|NC_009767|PILER-CR	1981157-1981193	37	NC_017533	Pantoea ananatis AJ13355 plasmid pEA320, complete sequence	255626-255662	9	0.757
NC_009767_36	36.77|1981157|37|NC_009767|PILER-CR	1981157-1981193	37	NZ_CP014208	Pantoea ananatis strain R100 plasmid, complete sequence	201428-201464	9	0.757
NC_009767_36	36.77|1981157|37|NC_009767|PILER-CR	1981157-1981193	37	CP054909	Pantoea ananatis strain FDAARGOS_680 plasmid unnamed1, complete sequence	67578-67614	9	0.757
NC_009767_36	36.77|1981157|37|NC_009767|PILER-CR	1981157-1981193	37	NZ_CP035036	Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence	97808-97844	9	0.757
NC_009767_36	36.77|1981157|37|NC_009767|PILER-CR	1981157-1981193	37	NC_016817	Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence	183760-183796	9	0.757
NC_009767_36	36.77|1981157|37|NC_009767|PILER-CR	1981157-1981193	37	NZ_CP020944	Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence	168489-168525	9	0.757
NC_009767_36	36.77|1981157|37|NC_009767|PILER-CR	1981157-1981193	37	NC_017553	Pantoea ananatis PA13 plasmid PAGR_p, complete sequence	168574-168610	9	0.757
NC_009767_36	36.77|1981157|37|NC_009767|PILER-CR	1981157-1981193	37	NZ_CP022429	Pantoea ananatis strain YJ76 plasmid p_unamed1	13459-13495	9	0.757
NC_009767_36	36.77|1981157|37|NC_009767|PILER-CR	1981157-1981193	37	NZ_CP022429	Pantoea ananatis strain YJ76 plasmid p_unamed1	327373-327409	9	0.757
NC_009767_36	36.105|1983203|37|NC_009767|PILER-CR	1983203-1983239	37	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	76116-76152	9	0.757
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	419397-419430	9	0.735
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP011248	Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence	153457-153491	9	0.743
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	227195-227229	9	0.743
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP032919	Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence	153218-153252	9	0.743
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP033029	Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence	153302-153336	9	0.743
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	1148924-1148958	9	0.743
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP016620	Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence	536722-536756	9	0.743
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP029986	Sphingomonas sp. FARSPH plasmid p01, complete sequence	220018-220052	9	0.743
NC_009767_36	36.233|1983277|35|NC_009767|CRISPRCasFinder,CRT	1983277-1983311	35	NC_017543	Paenibacillus polymyxa M1 plasmid pPPM1a, complete sequence	155828-155862	9	0.743
NC_009767_36	36.250|1984526|37|NC_009767|CRISPRCasFinder,CRT	1984526-1984562	37	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	1261840-1261876	9	0.757
NC_009767_44	44.1|2243222|35|NC_009767|CRISPRCasFinder	2243222-2243256	35	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	293982-294016	9	0.743
NC_009767_49	49.33|2546619|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT	2546619-2546652	34	NC_023007	Bacillus phage vB_BanS-Tsamsa, complete genome	84865-84898	9	0.735
NC_009767_49	49.33|2546619|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT	2546619-2546652	34	MK288021	Bacillus phage pW2, complete genome	29581-29614	9	0.735
NC_009767_67	67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3447784-3447820	37	NZ_CP031082	Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence	13717-13753	9	0.757
NC_009767_67	67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3447784-3447820	37	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	36595-36631	9	0.757
NC_009767_67	67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3447784-3447820	37	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	54487-54523	9	0.757
NC_009767_67	67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3447784-3447820	37	NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	39731-39767	9	0.757
NC_009767_67	67.42|3450537|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450537-3450572	36	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	190084-190119	9	0.75
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	227676-227713	9	0.763
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2677108-2677145	9	0.763
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_CP020556	Streptomyces sp. Sge12 plasmid pSGE, complete sequence	5720-5757	9	0.763
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NC_019958	Mycobacterium sp. JS623 plasmid pMYCSM02, complete sequence	126903-126940	9	0.763
NC_009767_67	67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT	3451508-3451544	37	NZ_CP045310	Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence	3184-3220	9	0.757
NC_009767_67	67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT	3451508-3451544	37	NZ_CP045310	Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence	9586-9622	9	0.757
NC_009767_67	67.79|3451516|36|NC_009767|PILER-CR	3451516-3451551	36	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	460121-460156	9	0.75
NC_009767_67	67.79|3451516|36|NC_009767|PILER-CR	3451516-3451551	36	NZ_CP018573	Marivivens sp. JLT3646 plasmid unnamed, complete sequence	75692-75727	9	0.75
NC_009767_67	67.79|3451516|36|NC_009767|PILER-CR	3451516-3451551	36	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	204120-204155	9	0.75
NC_009767_72	72.1|3710689|34|NC_009767|CRISPRCasFinder	3710689-3710722	34	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	325121-325154	9	0.735
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	47543-47572	9	0.7
NC_009767_80	80.1|4221663|30|NC_009767|CRISPRCasFinder	4221663-4221692	30	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	433977-434006	9	0.7
NC_009767_82	82.1|4297350|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4297350-4297384	35	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	401531-401565	9	0.743
NC_009767_82	82.62|4301771|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4301771-4301806	36	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	612639-612674	9	0.75
NC_009767_82	82.72|4302497|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4302497-4302532	36	MH155878	Streptomyces phage RavenPuff, complete genome	1810-1845	9	0.75
NC_009767_82	82.72|4302497|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4302497-4302532	36	MH155869	Streptomyces phage HotFries, complete genome	1810-1845	9	0.75
NC_009767_82	82.72|4302497|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4302497-4302532	36	MH155872	Streptomyces phage Moozy, complete genome	1812-1847	9	0.75
NC_009767_82	82.72|4302497|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4302497-4302532	36	MK686070	Streptomyces phage PherryCruz, complete genome	1810-1845	9	0.75
NC_009767_82	82.91|4303870|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4303870-4303903	34	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	512931-512964	9	0.735
NC_009767_82	82.131|4306762|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4306762-4306795	34	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	126097-126130	9	0.735
NC_009767_82	82.194|4311326|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR	4311326-4311360	35	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	909796-909830	9	0.743
NC_009767_82	82.194|4311326|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR	4311326-4311360	35	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1263438-1263472	9	0.743
NC_009767_98	98.2|5453194|34|NC_009767|CRT	5453194-5453227	34	NZ_CP029828	Burkholderia sp. JP2-270 plasmid p2, complete sequence	74062-74095	9	0.735
NC_009767_1	1.1|142967|33|NC_009767|CRISPRCasFinder	142967-142999	33	NZ_CP017303	Rhodococcus sp. YL-1 plasmid pYLL1 sequence	124567-124599	10	0.697
NC_009767_1	1.1|142967|33|NC_009767|CRISPRCasFinder	142967-142999	33	NZ_CP042915	Rhodococcus qingshengii strain RL1 plasmid unnamed2	165347-165379	10	0.697
NC_009767_3	3.1|288119|32|NC_009767|CRISPRCasFinder	288119-288150	32	NZ_CP010589	Phaeobacter gallaeciensis strain P11 plasmid pP11_a, complete sequence	214353-214384	10	0.688
NC_009767_3	3.1|288119|32|NC_009767|CRISPRCasFinder	288119-288150	32	NZ_CP021041	Phaeobacter gallaeciensis strain P129 plasmid pP129_a, complete sequence	214868-214899	10	0.688
NC_009767_3	3.1|288119|32|NC_009767|CRISPRCasFinder	288119-288150	32	NZ_CP010674	Phaeobacter gallaeciensis strain P75 plasmid pP75_a, complete sequence	214353-214384	10	0.688
NC_009767_3	3.1|288119|32|NC_009767|CRISPRCasFinder	288119-288150	32	NC_023138	Phaeobacter gallaeciensis DSM 26640 plasmid pGal_A255, complete sequence	213861-213892	10	0.688
NC_009767_3	3.1|288119|32|NC_009767|CRISPRCasFinder	288119-288150	32	NZ_CP010637	Phaeobacter gallaeciensis strain P73 plasmid pP73_a, complete sequence	214353-214384	10	0.688
NC_009767_21	21.14|1001941|35|NC_009767|CRT	1001941-1001975	35	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1897558-1897592	10	0.714
NC_009767_21	21.14|1001941|35|NC_009767|CRT	1001941-1001975	35	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1897565-1897599	10	0.714
NC_009767_21	21.14|1001941|35|NC_009767|CRT	1001941-1001975	35	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1897572-1897606	10	0.714
NC_009767_36	36.18|1976840|37|NC_009767|PILER-CR	1976840-1976876	37	NZ_CP017280	Enterobacter ludwigii strain EN-119 plasmid pEN-119, complete sequence	63781-63817	10	0.73
NC_009767_36	36.85|1981741|36|NC_009767|PILER-CR	1981741-1981776	36	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	227195-227230	10	0.722
NC_009767_36	36.85|1981741|36|NC_009767|PILER-CR	1981741-1981776	36	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	1148924-1148959	10	0.722
NC_009767_36	36.85|1981741|36|NC_009767|PILER-CR	1981741-1981776	36	NZ_CP016620	Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence	536722-536757	10	0.722
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	222194-222230	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	222288-222324	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	246494-246530	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	222203-222239	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	244969-245005	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1774105-1774141	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1774241-1774277	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1654567-1654603	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1773766-1773802	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1773712-1773748	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1765797-1765833	10	0.73
NC_009767_36	36.87|1981886|37|NC_009767|PILER-CR	1981886-1981922	37	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1704573-1704609	10	0.73
NC_009767_36	36.91|1982181|37|NC_009767|PILER-CR	1982181-1982217	37	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	942854-942890	10	0.73
NC_009767_36	36.145|1976841|36|NC_009767|CRISPRCasFinder,CRT	1976841-1976876	36	NZ_CP017280	Enterobacter ludwigii strain EN-119 plasmid pEN-119, complete sequence	63782-63817	10	0.722
NC_009767_36	36.177|1979182|36|NC_009767|CRISPRCasFinder,CRT	1979182-1979217	36	CP047389	Agrobacterium sp. CGMCC 11546 plasmid pA	222416-222451	10	0.722
NC_009767_36	36.196|1980572|36|NC_009767|CRISPRCasFinder,CRT	1980572-1980607	36	NZ_CP015738	Shinella sp. HZN7 plasmid pShin-02, complete sequence	187981-188016	10	0.722
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP039899	Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence	373337-373371	10	0.714
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	887112-887146	10	0.714
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	NZ_CP039890	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence	373337-373371	10	0.714
NC_009767_36	36.218|1982182|36|NC_009767|CRISPRCasFinder,CRT	1982182-1982217	36	MT740745	Ralstonia phage Raharianne, complete genome	15773-15808	10	0.722
NC_009767_36	36.218|1982182|36|NC_009767|CRISPRCasFinder,CRT	1982182-1982217	36	MT740726	Ralstonia phage Albius, complete genome	15835-15870	10	0.722
NC_009767_36	36.218|1982182|36|NC_009767|CRISPRCasFinder,CRT	1982182-1982217	36	MT740743	Ralstonia phage Hyacinthe, complete genome	7233-7268	10	0.722
NC_009767_36	36.229|1982986|35|NC_009767|CRISPRCasFinder,CRT	1982986-1983020	35	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	485098-485132	10	0.714
NC_009767_36	36.229|1982986|35|NC_009767|CRISPRCasFinder,CRT	1982986-1983020	35	NZ_CP028970	Aminobacter sp. MSH1 plasmid pUSP2, complete sequence	174168-174202	10	0.714
NC_009767_36	36.237|1983573|35|NC_009767|CRISPRCasFinder,CRT	1983573-1983607	35	NC_014811	Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence	101080-101114	10	0.714
NC_009767_44	44.1|2243222|35|NC_009767|CRISPRCasFinder	2243222-2243256	35	NC_009339	Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence	113545-113579	10	0.714
NC_009767_49	49.53|2548140|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT	2548140-2548177	38	NZ_CP035092	Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence	608751-608788	10	0.737
NC_009767_49	49.53|2548140|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT	2548140-2548177	38	NC_008688	Paracoccus denitrificans PD1222 plasmid 1, complete sequence	202284-202321	10	0.737
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	400960-400995	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1340580-1340615	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1302764-1302799	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1406803-1406838	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1637472-1637507	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	395958-395993	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	905542-905577	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	645693-645728	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1026612-1026647	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	277320-277355	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	567208-567243	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	619580-619615	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	399067-399102	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1459032-1459067	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1235325-1235360	10	0.722
NC_009767_55	55.1|2986680|36|NC_009767|CRISPRCasFinder	2986680-2986715	36	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1340586-1340621	10	0.722
NC_009767_67	67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3447784-3447820	37	NC_019846	Sinorhizobium meliloti GR4 plasmid pRmeGR4a, complete sequence	58999-59035	10	0.73
NC_009767_67	67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3447784-3447820	37	NZ_CP021826	Sinorhizobium meliloti strain KH35c plasmid accessoryA, complete sequence	134216-134252	10	0.73
NC_009767_67	67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3448155-3448192	38	NZ_KX443401	Rhodococcus hoagii strain PAM1572 plasmid pVAPN1572, complete sequence	5511-5548	10	0.737
NC_009767_67	67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3448155-3448192	38	NZ_KX443398	Rhodococcus hoagii strain PAM1204 plasmid pVAPN1204, complete sequence	4946-4983	10	0.737
NC_009767_67	67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3448155-3448192	38	NZ_KP851975	Rhodococcus hoagii strain PAM2012 plasmid pVAPN2012, complete sequence	5002-5039	10	0.737
NC_009767_67	67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3448155-3448192	38	NZ_KF439868	Rhodococcus hoagii strain PAM1571 plasmid pVAPN1571, complete sequence	3948-3985	10	0.737
NC_009767_67	67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3448155-3448192	38	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	212594-212631	10	0.737
NC_009767_67	67.35|3450011|40|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450011-3450050	40	NZ_CP023152	Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence	237008-237047	10	0.75
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	646201-646238	10	0.737
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	392726-392763	10	0.737
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_CP029832	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence	179277-179314	10	0.737
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_CP041045	Paracoccus sp. AK26 plasmid pAK1, complete sequence	280471-280508	10	0.737
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NC_001425	Streptomyces flavovirens plasmid pSN22 DNA, complete sequence	7387-7424	10	0.737
NC_009767_67	67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT	3451508-3451544	37	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	460121-460157	10	0.73
NC_009767_67	67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT	3451508-3451544	37	NZ_CP018573	Marivivens sp. JLT3646 plasmid unnamed, complete sequence	75691-75727	10	0.73
NC_009767_67	67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT	3451508-3451544	37	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	204119-204155	10	0.73
NC_009767_67	67.76|3448459|33|NC_009767|PILER-CR	3448459-3448491	33	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	219368-219400	10	0.697
NC_009767_67	67.76|3448459|33|NC_009767|PILER-CR	3448459-3448491	33	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	336176-336208	10	0.697
NC_009767_72	72.1|3710689|34|NC_009767|CRISPRCasFinder	3710689-3710722	34	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	88480-88513	10	0.706
NC_009767_72	72.1|3710689|34|NC_009767|CRISPRCasFinder	3710689-3710722	34	NZ_CP031159	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence	76958-76991	10	0.706
NC_009767_72	72.1|3710689|34|NC_009767|CRISPRCasFinder	3710689-3710722	34	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	109006-109039	10	0.706
NC_009767_82	82.34|4299740|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4299740-4299775	36	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	476955-476990	10	0.722
NC_009767_82	82.39|4300103|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4300103-4300137	35	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	81104-81138	10	0.714
NC_009767_82	82.42|4300321|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4300321-4300357	37	MN478374	Bacteriophage Phobos, complete genome	48437-48473	10	0.73
NC_009767_82	82.106|4304950|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4304950-4304984	35	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	441884-441918	10	0.714
NC_009767_82	82.106|4304950|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4304950-4304984	35	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1917516-1917550	10	0.714
NC_009767_82	82.131|4306762|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4306762-4306795	34	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	790336-790369	10	0.706
NC_009767_98	98.2|5453194|34|NC_009767|CRT	5453194-5453227	34	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	317830-317863	10	0.706
NC_009767_98	98.2|5453194|34|NC_009767|CRT	5453194-5453227	34	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1891015-1891048	10	0.706
NC_009767_21	21.7|1001496|49|NC_009767|CRT	1001496-1001544	49	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1897551-1897599	11	0.776
NC_009767_31	31.1|1645966|34|NC_009767|CRISPRCasFinder	1645966-1645999	34	NZ_CP031468	Paraburkholderia caffeinilytica strain CF1 plasmid p1, complete sequence	83631-83664	11	0.676
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	140413-140447	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	191154-191188	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	211138-211172	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	252923-252957	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	348030-348064	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	805953-805987	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	191347-191381	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	191346-191380	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	188917-188951	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	192487-192521	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	211654-211688	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	252991-253025	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	188527-188561	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	211654-211688	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	211654-211688	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	188527-188561	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	211654-211688	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	188527-188561	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	188527-188561	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	211654-211688	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	213498-213532	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	188527-188561	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	188527-188561	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	440507-440541	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1741252-1741286	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	221983-222017	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	121387-121421	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	902197-902231	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1885925-1885959	11	0.686
NC_009767_36	36.4|1975808|35|NC_009767|PILER-CR	1975808-1975842	35	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1885925-1885959	11	0.686
NC_009767_36	36.50|1979181|37|NC_009767|PILER-CR	1979181-1979217	37	CP047389	Agrobacterium sp. CGMCC 11546 plasmid pA	222416-222452	11	0.703
NC_009767_36	36.69|1980571|37|NC_009767|PILER-CR	1980571-1980607	37	NZ_CP015738	Shinella sp. HZN7 plasmid pShin-02, complete sequence	187980-188016	11	0.703
NC_009767_36	36.91|1982181|37|NC_009767|PILER-CR	1982181-1982217	37	MT740745	Ralstonia phage Raharianne, complete genome	15773-15809	11	0.703
NC_009767_36	36.91|1982181|37|NC_009767|PILER-CR	1982181-1982217	37	MT740726	Ralstonia phage Albius, complete genome	15835-15871	11	0.703
NC_009767_36	36.91|1982181|37|NC_009767|PILER-CR	1982181-1982217	37	MT740743	Ralstonia phage Hyacinthe, complete genome	7233-7269	11	0.703
NC_009767_36	36.105|1983203|37|NC_009767|PILER-CR	1983203-1983239	37	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	811323-811359	11	0.703
NC_009767_36	36.105|1983203|37|NC_009767|PILER-CR	1983203-1983239	37	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	167802-167838	11	0.703
NC_009767_36	36.110|1983572|36|NC_009767|PILER-CR	1983572-1983607	36	NC_014811	Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence	101080-101115	11	0.694
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	140414-140447	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	191155-191188	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	211139-211172	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	252924-252957	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	348031-348064	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	805954-805987	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	191348-191381	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	191347-191380	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	188918-188951	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	192488-192521	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	211655-211688	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	252992-253025	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	188528-188561	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	211655-211688	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	211655-211688	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	188528-188561	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	211655-211688	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	188528-188561	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	188528-188561	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	211655-211688	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	213499-213532	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	188528-188561	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	188528-188561	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	440507-440540	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1741252-1741285	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	221983-222016	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	121387-121420	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	902197-902230	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1885925-1885958	11	0.676
NC_009767_36	36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT	1975809-1975842	34	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1885925-1885958	11	0.676
NC_009767_36	36.158|1977792|36|NC_009767|CRISPRCasFinder,CRT	1977792-1977827	36	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	1446827-1446862	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1774106-1774141	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1774242-1774277	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1654568-1654603	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1773767-1773802	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1773713-1773748	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1765798-1765833	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1704574-1704609	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	222194-222229	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	222288-222323	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	246494-246529	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	222203-222238	11	0.694
NC_009767_36	36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT	1981887-1981922	36	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	244969-245004	11	0.694
NC_009767_36	36.232|1983204|36|NC_009767|CRISPRCasFinder,CRT	1983204-1983239	36	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	811324-811359	11	0.694
NC_009767_36	36.232|1983204|36|NC_009767|CRISPRCasFinder,CRT	1983204-1983239	36	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	167803-167838	11	0.694
NC_009767_36	36.232|1983204|36|NC_009767|CRISPRCasFinder,CRT	1983204-1983239	36	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	454999-455034	11	0.694
NC_009767_67	67.2|3447565|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3447565-3447599	35	NZ_CP020568	Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence	3455-3489	11	0.686
NC_009767_67	67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3448155-3448192	38	NZ_KX443399	Rhodococcus hoagii strain PAM1354 plasmid pVAPA1354, complete sequence	5056-5093	11	0.711
NC_009767_67	67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3448155-3448192	38	NZ_KX443400	Rhodococcus hoagii strain PAM1557 plasmid pVAPN1557, complete sequence	5002-5039	11	0.711
NC_009767_67	67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT	3448743-3448779	37	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	87212-87248	11	0.703
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_CP011665	Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence	51039-51076	11	0.711
NC_009767_67	67.79|3451516|36|NC_009767|PILER-CR	3451516-3451551	36	NZ_CP019037	Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence	154855-154890	11	0.694
NC_009767_82	82.9|4297929|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4297929-4297965	37	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	30081-30117	11	0.703
NC_009767_82	82.44|4300465|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4300465-4300499	35	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1746713-1746747	11	0.686
NC_009767_82	82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4302857-4302892	36	NZ_CP018851	Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.1, complete sequence	7500-7535	11	0.694
NC_009767_82	82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4302857-4302892	36	NZ_CP023286	Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pCuR, complete sequence	148638-148673	11	0.694
NC_009767_82	82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4302857-4302892	36	NZ_CP018859	Xanthomonas citri pv. citri strain LH201 plasmid pLH201.1, complete sequence	129574-129609	11	0.694
NC_009767_82	82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4302857-4302892	36	NZ_CP018848	Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.1, complete sequence	171732-171767	11	0.694
NC_009767_82	82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4302857-4302892	36	NZ_CP018855	Xanthomonas citri pv. citri strain LH276 plasmid pLH276.1, complete sequence	157509-157544	11	0.694
NC_009767_82	82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4302857-4302892	36	NZ_CP018729	Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.1, complete sequence	157676-157711	11	0.694
NC_009767_98	98.2|5453194|34|NC_009767|CRT	5453194-5453227	34	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	437901-437934	11	0.676
NC_009767_12	12.1|708293|34|NC_009767|CRT	708293-708326	34	NZ_CP031094	Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence	21859-21892	12	0.647
NC_009767_12	12.3|708434|34|NC_009767|CRT	708434-708467	34	NZ_CP031094	Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence	21859-21892	12	0.647
NC_009767_36	36.31|1977791|37|NC_009767|PILER-CR	1977791-1977827	37	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	1446827-1446863	12	0.676
NC_009767_36	36.105|1983203|37|NC_009767|PILER-CR	1983203-1983239	37	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	454998-455034	12	0.676
NC_009767_36	36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT	1981742-1981776	35	MH271312	Microbacterium phage RobsFeet, complete genome	2918-2952	12	0.657
NC_009767_67	67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR	3450835-3450872	38	NZ_CP041158	Leisingera aquaemixtae strain R2C4 plasmid unnamed4, complete sequence	5399-5436	12	0.684
NC_009767_67	67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT	3451508-3451544	37	NZ_CP019037	Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence	154854-154890	12	0.676
NC_009767_82	82.9|4297929|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4297929-4297965	37	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	482407-482443	12	0.676
NC_009767_82	82.36|4299884|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4299884-4299919	36	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	680870-680905	12	0.667
NC_009767_82	82.125|4306327|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT	4306327-4306363	37	NC_020308	Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 plasmid pCFSAN001992_2, complete sequence	7277-7313	12	0.676
NC_009767_82	82.173|4309802|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR	4309802-4309838	37	NC_020308	Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 plasmid pCFSAN001992_2, complete sequence	7277-7313	12	0.676

1. spacer 34.1|1838296|28|NC_009767|CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 4, identity: 0.857

acagcgcgaagcggagcgggcgcaacgt	CRISPR spacer
accgggcgaagcggagcgggcgcaacca	Protospacer
** * *********************  

2. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to AP018469 (Mycobacterium phage Y10 DNA, complete genome, note: sample1) position: , mismatch: 5, identity: 0.839

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
tcccacgctgcgccgaactgcgccgcccgct	Protospacer
************** ******* **** .*.

3. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to AP018470 (Mycobacterium phage Y2 DNA, complete genome) position: , mismatch: 5, identity: 0.839

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
tcccacgctgcgccgaactgcgccgcccgct	Protospacer
************** ******* **** .*.

4. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to MT310882 (Mycobacterium phage JF1, complete genome) position: , mismatch: 5, identity: 0.839

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
tcccacgctgcgccgaactgcgccgcccgct	Protospacer
************** ******* **** .*.

5. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to AP018471 (Mycobacterium phage Y10 DNA, complete genome, note: sample2) position: , mismatch: 5, identity: 0.839

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
tcccacgctgcgccgaactgcgccgcccgct	Protospacer
************** ******* **** .*.

6. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to MK224497 (Mycobacterium phage Henu3, complete genome) position: , mismatch: 5, identity: 0.839

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
tcccacgctgcgccgaactgcgccgcccgct	Protospacer
************** ******* **** .*.

7. spacer 34.1|1838296|28|NC_009767|CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

acagcgcgaagcggagcgggcgcaacgt	CRISPR spacer
acagcgcggagccgagcgggcgcatcag	Protospacer
********.*** *********** *. 

8. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.857

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
tggggctcggcatcgccgccgcgcgcgaggcgggc	Protospacer
* **** ** ********************** * 

9. spacer 40.1|2178330|26|NC_009767|PILER-CR matches to NZ_AP017976 (Microbacterium sp. TPU 3598 plasmid MST3P, complete sequence) position: , mismatch: 5, identity: 0.808

gccccgcaccctggcaagtccccgta	CRISPR spacer
ctcccgcacgctggcatgtccccgtc	Protospacer
 .******* ****** ******** 

10. spacer 67.17|3448680|26|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

gcgcgtacggctcgcagcggcgacgt	CRISPR spacer
gcgcgtacggctcgccgcgccgaatc	Protospacer
*************** *** ***  .

11. spacer 67.17|3448680|26|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP013423 (Burkholderia sp. MSMB0852 plasmid pMSMB0852, complete sequence) position: , mismatch: 5, identity: 0.808

gcgcgtacggctcgcagcggcgacgt	CRISPR spacer
gcgcggacggctcgcaacggcgatcg	Protospacer
***** **********.******.  

12. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 5, identity: 0.821

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cgcctccgcggccgcccgcgcttccacg	Protospacer
.******** ************** .* 

13. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 5, identity: 0.821

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
caccttcgccgccgcccgcgcctcggcg	Protospacer
..***.***************.***** 

14. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP032688 (Rhizobium sp. CCGE531 plasmid pRCCGE531a, complete sequence) position: , mismatch: 5, identity: 0.821

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
tcccaccgccgccgccagcgcttcgtcg	Protospacer
* ** *********** ******** * 

15. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP032693 (Rhizobium sp. CCGE532 plasmid pRCCGE532a, complete sequence) position: , mismatch: 5, identity: 0.821

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
tcccaccgccgccgccagcgcttcgtcg	Protospacer
* ** *********** ******** * 

16. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP006987 (Rhizobium sp. IE4771 plasmid pRetIE4771a, complete sequence) position: , mismatch: 5, identity: 0.821

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
tcccaccgccgccgccagcgcttcgtcg	Protospacer
* ** *********** ******** * 

17. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 5, identity: 0.821

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cggctccgccgccgcccgcccttccggt	Protospacer
.* **************** **** * *

18. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP017103 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872a, complete sequence) position: , mismatch: 5, identity: 0.821

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
tcccaccgccgccgccagcgcttcgtcg	Protospacer
* ** *********** ******** * 

19. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NC_009508 (Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence) position: , mismatch: 5, identity: 0.821

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
ttcagccacagccgcccgcgcttcggct	Protospacer
* *  **.* ******************

20. spacer 12.1|708293|34|NC_009767|CRT matches to NC_019746 (Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence) position: , mismatch: 6, identity: 0.824

-ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
ttgtaga-aggcaagaggcgagaggcgagaggcaa	Protospacer
  **.** ******************.******..

21. spacer 12.3|708434|34|NC_009767|CRT matches to NC_019746 (Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence) position: , mismatch: 6, identity: 0.824

-ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
ttgtaga-aggcaagaggcgagaggcgagaggcaa	Protospacer
  **.** ******************.******..

22. spacer 34.1|1838296|28|NC_009767|CRT matches to NZ_CP014597 (Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

acagcgcgaagcggagcgggcgcaacgt	CRISPR spacer
ccagcgcgaagcggagcgggcccttgat	Protospacer
 ******************** *   .*

23. spacer 34.1|1838296|28|NC_009767|CRT matches to NZ_CP006370 (Aureimonas sp. AU20 plasmid pAU20c, complete sequence) position: , mismatch: 6, identity: 0.786

acagcgcgaagcggagcgggcgcaacgt	CRISPR spacer
gcagcacgaagcgcagcgggcgcacgat	Protospacer
.****.******* **********  .*

24. spacer 36.85|1981741|36|NC_009767|PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.833

ttcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
ctggggctcggcatcgccgccgcgcgcgaggcgggc	Protospacer
.* **** ** ********************** * 

25. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 6, identity: 0.829

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
tggtgggcgccatcgccgcctcgcgccaggcgcgc	Protospacer
* * * ************** ***** ******* 

26. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP011920 (Burkholderia cenocepacia strain ST32 plasmid pBCEN1232, complete sequence) position: , mismatch: 6, identity: 0.829

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
tcgaacaggccatcgccgccgcgcgcgtggagcgg	Protospacer
***..*. ******************* ** ****

27. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP014598 (Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.829

tcgggcgcgc---catcgccgccgcgcgcgaggcgcgg	CRISPR spacer
---ggcccgcaggcatggccgccgcgctcgaggcgcgg	Protospacer
   *** ***   *** ********** **********

28. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 6, identity: 0.829

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg-	CRISPR spacer
ccgggcaagccatcgccgccgcgcgc-agccgcgac	Protospacer
.*****. ****************** ** ****. 

29. spacer 36.227|1982843|32|NC_009767|CRISPRCasFinder,CRT matches to MN329673 (Gordonia phage Jabberwocky, complete genome) position: , mismatch: 6, identity: 0.812

attgcccggaggggcgcgccttgcgtatcagg-	CRISPR spacer
actgcccggcggcgcgcgccttgcg-atcggcg	Protospacer
*.******* ** ************ ***.*  

30. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010991 (Pseudonocardia sp. EC080625-04 plasmid pFRP1-2, complete sequence) position: , mismatch: 6, identity: 0.842

tcggcgccggcggcggggcgggcggcggcg----cggcgcgt	CRISPR spacer
tcggcgcgggcggcgcggcgggcggcggcgatctcggc----	Protospacer
******* ******* **************    ****    

31. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP025584 (Paracoccus jeotgali strain CBA4604 plasmid pCBA4604-01, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
gcgctccgccgccgcctgcgcttcggga	Protospacer
   *************.*********  

32. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
gaactccgccgccgcctgcgctgcggcc	Protospacer
 . *************.***** ****.

33. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
acgctccgccgccgcgcgggcttcggcg	Protospacer
   ************ ** ******** 

34. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP019318 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-6, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
gaactccgccgccgcctgcgcttccgcg	Protospacer
 . *************.******* ** 

35. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cggtgccgccgccgcccgcgcttcgacg	Protospacer
.* . ********************.* 

36. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to MK310226 (Halobacterium virus ChaoS9, complete genome) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
caccaccgccgccgaccgcgcttcggag	Protospacer
..** ********* ***********  

37. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

38. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

39. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

40. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

41. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

42. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

43. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to CP054917 (Streptomyces sp. NA02950 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cgccaccgccgccgcccgcgctcttgat	Protospacer
.*** *****************.. * *

44. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

45. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

46. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
tgcccccgccgccgcccgcgcccgcgcg	Protospacer
****.****************..  ** 

47. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

48. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

49. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

50. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

51. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
gtcgtccgccgccggccgcgcctcggcc	Protospacer
  * ********** ******.*****.

52. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

53. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

54. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

55. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

56. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

57. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

58. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

59. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

60. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

61. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

62. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

63. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

64. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

65. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

66. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to CP016641 (Mycobacterium sp. djl-10 plasmid djl-10_1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
catcaccgccgccgcccgcgcggcggct	Protospacer
...* ****************  *****

67. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

68. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

69. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

70. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

71. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

72. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

73. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

74. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

75. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

76. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

77. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

78. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

79. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

80. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

81. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

82. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

83. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

84. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

85. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

86. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

87. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

88. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

89. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

90. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

91. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

92. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcggccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

93. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

94. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

95. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

96. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

97. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

98. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacttccgcagccgccggcgcttcggcg	Protospacer
..*.***** ****** ********** 

99. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to KJ410133 (Mycobacterium phage Jolie2, complete genome) position: , mismatch: 6, identity: 0.786

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
gtcttcggccgcggcccgcgcttcggcc	Protospacer
  *.** ***** **************.

100. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

101. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

102. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

103. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

104. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

105. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

106. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

107. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

108. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

109. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

110. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

111. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

112. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcgcgcttc	Protospacer
   .*************** ******** *

113. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to MG592531 (Vibrio phage 1.164.O._10N.261.51.A7, partial genome) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac-	CRISPR spacer
gcaacgcaagccgccgccgccgc-tgatatt	Protospacer
*** *************** *** .* **. 

114. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.8

-gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cgcg-cgcacgctgccgccggcgcgcgcagc	Protospacer
 **. **** **.*************** .*

115. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP029835 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
gcatcgcgagccgccgcaggcgccagcccc	Protospacer
*******.********* *****  **. *

116. spacer 6.1|364383|29|NC_009767|CRISPRCasFinder matches to NZ_CP011045 (Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI2, complete sequence) position: , mismatch: 7, identity: 0.759

acgccggatggcgcgaacacgccatcggg	CRISPR spacer
gcgccggatggcgagcacacgccaaccat	Protospacer
.************ * ******** * . 

117. spacer 6.1|364383|29|NC_009767|CRISPRCasFinder matches to NZ_CP021036 (Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI2, complete sequence) position: , mismatch: 7, identity: 0.759

acgccggatggcgcgaacacgccatcggg	CRISPR spacer
gcgccggatggcgagcacacgccaaccat	Protospacer
.************ * ******** * . 

118. spacer 9.1|567519|32|NC_009767|CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 7, identity: 0.781

tatgcccaaatcgctgcggtgggggggaattg	CRISPR spacer
cacggccaaaacgctgcggtggcggggatatg	Protospacer
.*.* ***** *********** *****  **

119. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to NZ_CP049245 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.774

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
gaactggctgcgctcaactgcggcgccaatc	Protospacer
   *  *******.***************.*

120. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 7, identity: 0.774

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
atcgaggctgcgcccaacagcggcgccaccg	Protospacer
 .* * ************ ********* * 

121. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
atcgaggctgcgcccaacagcggcgccaccg	Protospacer
 .* * ************ ********* * 

122. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
atcgaggctgcgcccaacagcggcgccaccg	Protospacer
 .* * ************ ********* * 

123. spacer 12.1|708293|34|NC_009767|CRT matches to NC_019746 (Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence) position: , mismatch: 7, identity: 0.794

ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
aggcaagaggcgagaggcgagaggcaagaggcaa	Protospacer
.*  .******.********************..

124. spacer 12.3|708434|34|NC_009767|CRT matches to NC_019746 (Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence) position: , mismatch: 7, identity: 0.794

ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
aggcaagaggcgagaggcgagaggcaagaggcaa	Protospacer
.*  .******.********************..

125. spacer 21.11|1001744|42|NC_009767|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 7, identity: 0.833

atggtcgggcgcctcgcgcctcgcgcctcgcgcctcgcacct	CRISPR spacer
ccagccccgcgcctcgcgcctcgcgcctcgcgcctcgcgcct	Protospacer
 ..*.*  ******************************.***

126. spacer 34.1|1838296|28|NC_009767|CRT matches to NZ_CP045385 (Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence) position: , mismatch: 7, identity: 0.75

acagcgcgaagcggagcgggcgcaacgt	CRISPR spacer
gcagcgcgaagcagaacgggcgcaggaa	Protospacer
.***********.**.********. . 

127. spacer 36.85|1981741|36|NC_009767|PILER-CR matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 7, identity: 0.806

ttcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
ctggtgggcgccatcgccgcctcgcgccaggcgcgc	Protospacer
.* * * ************** ***** ******* 

128. spacer 36.85|1981741|36|NC_009767|PILER-CR matches to NZ_CP011920 (Burkholderia cenocepacia strain ST32 plasmid pBCEN1232, complete sequence) position: , mismatch: 7, identity: 0.806

ttcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
atcgaacaggccatcgccgccgcgcgcgtggagcgg	Protospacer
 ***..*. ******************* ** ****

129. spacer 36.177|1979182|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 7, identity: 0.806

tcgccgccgcgcgcctgaaccgtcacgcgccgttgc	CRISPR spacer
acgccgtcgcgcgcctgaaccgtcaggccctgcagc	Protospacer
 *****.****************** ** *.*. **

130. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP032327 (Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence) position: , mismatch: 7, identity: 0.8

tcgggcgcgc---catcgccgccgcgcgcgaggcgcgg	CRISPR spacer
---tgcgcgccggcatcgccgccgagcgcgaggcgctt	Protospacer
    ******   *********** ***********  

131. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP007798 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p5, complete sequence) position: , mismatch: 7, identity: 0.8

tcgggcgcgc---catcgccgccgcgcgcgaggcgcgg	CRISPR spacer
---tgcgcgccggcatcgccgccgagcgcgaggcgctt	Protospacer
    ******   *********** ***********  

132. spacer 67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to MK801725 (Gordonia phage Yago84, complete genome) position: , mismatch: 7, identity: 0.816

gggaaggggtggcccgcgtcgagcaggccgccgaccag	CRISPR spacer
aggccgaggccgcccgcgtcgagcaggccgccgagcag	Protospacer
.**  *.**. *********************** ***

133. spacer 67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

gatcatcgccgccgccatcgtcggcctcgagaagctc	CRISPR spacer
ggtcaccgccgccgccttcgtcggcctcgccgagccc	Protospacer
*.***.********** ************  .***.*

134. spacer 67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

gatcatcgccgccgccatcgtcggcctcgagaagctc	CRISPR spacer
ggtcaccgccgccgccttcgtcggcctcgccgagccc	Protospacer
*.***.********** ************  .***.*

135. spacer 67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

gatcatcgccgccgccatcgtcggcctcgagaagctc	CRISPR spacer
ggtcaccgccgccgccttcgtcggcctcgccgagccc	Protospacer
*.***.********** ************  .***.*

136. spacer 67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

gatcatcgccgccgccatcgtcggcctcgagaagctc	CRISPR spacer
ggtcaccgccgccgccttcgtcggcctcgccgagccc	Protospacer
*.***.********** ************  .***.*

137. spacer 67.44|3450685|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 7, identity: 0.816

gaggcgcccacgccgcgcgcgtgcagcagaaggcgctg--	CRISPR spacer
gaggcgcccacgccgtgcgcgcgcagccg--cgcgccgaa	Protospacer
***************.*****.***** *   ****.*  

138. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NC_048019 (Gordonia phage Ruthy, complete genome) position: , mismatch: 7, identity: 0.816

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
tcggcgccggcggcgacgcgggcggcggcgtcgtgctc	Protospacer
***************. *************. *.** .

139. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.816

tcggcgccggcggcggggcgggcggcggc-gcggcgcgt	CRISPR spacer
gcggcgccggcggcggcgccggcggcggcggcatcacg-	Protospacer
 *************** ** ********* **. *.** 

140. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 7, identity: 0.816

tcggcgc--cggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
--ggctcctcggcggcggggccggcggcggcccggcgggc	Protospacer
  *** *  ************ ********* ***** *.

141. spacer 71.1|3707738|34|NC_009767|CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.794

cgcacggcgcaccggtctggacggggcgcattga-	CRISPR spacer
cgcgcggcgcaccggtccggacggag-gcggggag	Protospacer
***.*************.******.* **.  ** 

142. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP054603 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
actgatcgccgccgcccgcgcttcggcg	Protospacer
  .  .********************* 

143. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cgcctccgccgccgcccgcgcgctgcgg	Protospacer
.******************** ..*   

144. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cgcctccgccgccgcccgcgcgctgcgg	Protospacer
.******************** ..*   

145. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cgcctccgccgccgcccgcgcgctgcgg	Protospacer
.******************** ..*   

146. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cgcctccgccgccgcccgcgcgctgcgg	Protospacer
.******************** ..*   

147. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cgcctccgccgccgcccgcgcgctgcgg	Protospacer
.******************** ..*   

148. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cgcctccgccgccgcccgcgcgctgcgg	Protospacer
.******************** ..*   

149. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
acaccccgtcgccgcccgcgcttcggag	Protospacer
   *.***.*****************  

150. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
gaggaccgccaccgcccgcgctgcggct	Protospacer
 .   *****.*********** *****

151. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cgccgccgccgccgcccgcgctggagga	Protospacer
.*** *****************  .*  

152. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP024896 (Amycolatopsis sp. AA4 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
ggcctcggccgccgtccgcgcttcccag	Protospacer
 ***** *******.*********    

153. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cgcctccgcagccgcccgcgctgcacac	Protospacer
.******** ************ *.  .

154. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
cacctccgccgccgccagcggttcgagc	Protospacer
..************** *** ****. .

155. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NC_009939 (Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
ggcctccgccgccgcgcgcgcctcctgc	Protospacer
 ************** *****.**   .

156. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
tgcctccgccgccgccagcgcggccata	Protospacer
**************** ****  * .. 

157. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
gcgttccgccgcggcctgcgcttcggcg	Protospacer
   .******** ***.********** 

158. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to MH153804 (Rhodococcus phage Jace, complete genome) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
tgccaccgccgccgcccgcgccggtctt	Protospacer
**** ****************.    .*

159. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to JX042579 (Mycobacterium virus MacnCheese, complete genome) position: , mismatch: 7, identity: 0.75

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
tgccgccgccgccgcccgcgccgagcag	Protospacer
**** ****************.  *   

160. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 7, identity: 0.767

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
tgtgcgcaagccgccgccatcgcgcgcttc	Protospacer
    **************. ******** *

161. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to MH588544 (Caulobacter phage CcrBL10, complete genome) position: , mismatch: 7, identity: 0.767

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
acatcgccggccgccgccggcgcgcctgaa	Protospacer
.****** .**************** . * 

162. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 7, identity: 0.767

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
tgtgcgcaagccgccgccatcgcgcgcttc	Protospacer
    **************. ******** *

163. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 7, identity: 0.767

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
ggagacgatgccgccgccggcgcgcgcgac	Protospacer
* *    * ****************** **

164. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
gcgccgctcgccgccgccggcgcgcgcgtg	Protospacer
**..***  ******************   

165. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NC_012858 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence) position: , mismatch: 7, identity: 0.767

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
ggagacgatgccgccgccggcgcgcgcgac	Protospacer
* *    * ****************** **

166. spacer 6.1|364383|29|NC_009767|CRISPRCasFinder matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.724

acgccggatggcgcgaacacgccatcggg	CRISPR spacer
gtgccggacggcgcgaacacgccaatcca	Protospacer
..******.*************** .  .

167. spacer 6.1|364383|29|NC_009767|CRISPRCasFinder matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 8, identity: 0.724

acgccggatggcgcgaacacgccatcggg	CRISPR spacer
gtgccggacggcgcgaacacgccaatcca	Protospacer
..******.*************** .  .

168. spacer 9.1|567519|32|NC_009767|CRISPRCasFinder matches to NZ_CP010957 (Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence) position: , mismatch: 8, identity: 0.75

tatgcccaaatcgctgcggtggggg---ggaattg	CRISPR spacer
cgcgcccagatcgctgcgatggggggctggaa---	Protospacer
...*****.*********.******   ****   

169. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to NZ_CP032687 (Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence) position: , mismatch: 8, identity: 0.742

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
accaggaatgcgcccaaccgcggcgccagcc	Protospacer
 ** . . **********.*********.**

170. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to NC_020061 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence) position: , mismatch: 8, identity: 0.742

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
accaggaatgcgcccaaccgcggcgccagcc	Protospacer
 ** . . **********.*********.**

171. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 8, identity: 0.742

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
accaggaatgcgcccaaccgcggcgccagcc	Protospacer
 ** . . **********.*********.**

172. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to MN234183 (Mycobacterium phage Antsirabe, complete genome) position: , mismatch: 8, identity: 0.742

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
ccgcacgctgcggccatctgcggcgcgttcg	Protospacer
.* ********* *** *********   * 

173. spacer 12.1|708293|34|NC_009767|CRT matches to NZ_CP031094 (Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence) position: , mismatch: 8, identity: 0.765

ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
agccaagaggcaagaggcaagaggcaagagtcta	Protospacer
.*. .*************.*********** * .

174. spacer 12.3|708434|34|NC_009767|CRT matches to NZ_CP031094 (Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence) position: , mismatch: 8, identity: 0.765

ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
agccaagaggcaagaggcaagaggcaagagtcta	Protospacer
.*. .*************.*********** * .

175. spacer 21.14|1001941|35|NC_009767|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 8, identity: 0.771

atggtcgggcgcctcgcgcctcgcgcctcttgcct	CRISPR spacer
ccagccccgcgcctcgcgcctcgcgcctcgcgcct	Protospacer
 ..*.*  ********************* .****

176. spacer 36.2|1975664|36|NC_009767|PILER-CR matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.778

-gcggcagcgccgccggcagcacgactagcccgccgt	CRISPR spacer
tgccgc-gcgccgccggcagcacggccagcccggtca	Protospacer
 ** ** *****************.*.****** .  

177. spacer 36.2|1975664|36|NC_009767|PILER-CR matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 8, identity: 0.778

-gcggcagcgccgccggcagcacgactagcccgccgt	CRISPR spacer
tgccgc-gcgccgccggcagcacggcaagcccggtca	Protospacer
 ** ** *****************.* ****** .  

178. spacer 36.50|1979181|37|NC_009767|PILER-CR matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 8, identity: 0.784

ttcgccgccgcgcgcctgaaccgtcacgcgccgttgc	CRISPR spacer
gacgccgtcgcgcgcctgaaccgtcaggccctgcagc	Protospacer
  *****.****************** ** *.*. **

179. spacer 36.85|1981741|36|NC_009767|PILER-CR matches to NZ_CP032327 (Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence) position: , mismatch: 8, identity: 0.778

ttcgggcg-cgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
-ctgcgcgccggcatcgccgccgagcgcgaggcgctt	Protospacer
 ..* *** ** *********** ***********  

180. spacer 36.85|1981741|36|NC_009767|PILER-CR matches to NZ_CP007798 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p5, complete sequence) position: , mismatch: 8, identity: 0.778

ttcgggcg-cgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
-ctgcgcgccggcatcgccgccgagcgcgaggcgctt	Protospacer
 ..* *** ** *********** ***********  

181. spacer 36.102|1982985|36|NC_009767|PILER-CR matches to NZ_CP006370 (Aureimonas sp. AU20 plasmid pAU20c, complete sequence) position: , mismatch: 8, identity: 0.778

ttccttgggcgtgcgcctcttcgtcttcgtcagggc	CRISPR spacer
tctcttccgcgtgcgcctcttcgtcttcgcctatgc	Protospacer
*..***  *********************.* . **

182. spacer 36.129|1975665|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.771

-cggcagcgccgccggcagcacgactagcccgccgt	CRISPR spacer
gccgc-gcgccgccggcagcacggccagcccggtca	Protospacer
 * ** *****************.*.****** .  

183. spacer 36.129|1975665|35|NC_009767|CRISPRCasFinder,CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 8, identity: 0.771

-cggcagcgccgccggcagcacgactagcccgccgt	CRISPR spacer
gccgc-gcgccgccggcagcacggcaagcccggtca	Protospacer
 * ** *****************.* ****** .  

184. spacer 36.161|1978011|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 8, identity: 0.778

gagacgccgaactcggacgtcaaccgtgtggaacgc	CRISPR spacer
gagacgccgatctcgaacgtcaaccgcacggtgggc	Protospacer
********** ****.**********...** . **

185. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

186. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

187. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

188. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

189. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

190. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

191. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

192. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

193. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

194. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

195. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

196. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

197. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

198. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

199. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

200. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

201. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

202. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

203. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

204. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

205. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

206. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

207. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

208. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

209. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

210. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

211. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

212. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

213. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

214. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

215. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

216. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

217. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

218. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

219. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

220. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

221. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

222. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

223. spacer 36.169|1978596|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.784

ctggcggaggcgatggacgccgcgctgt-ccatcgccg	CRISPR spacer
gcggcggtggcgatggccgccgcgctgtggcggcgcc-	Protospacer
 .***** ******** ***********  *. **** 

224. spacer 36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT matches to NC_017533 (Pantoea ananatis AJ13355 plasmid pEA320, complete sequence) position: , mismatch: 8, identity: 0.778

gccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
gtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
*.*...* ****************** * ****** 

225. spacer 36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT matches to NC_016817 (Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence) position: , mismatch: 8, identity: 0.778

gccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
gtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
*.*...* ****************** * ****** 

226. spacer 36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP020944 (Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence) position: , mismatch: 8, identity: 0.778

gccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
gtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
*.*...* ****************** * ****** 

227. spacer 36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP014208 (Pantoea ananatis strain R100 plasmid, complete sequence) position: , mismatch: 8, identity: 0.778

gccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
gtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
*.*...* ****************** * ****** 

228. spacer 36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT matches to NC_017553 (Pantoea ananatis PA13 plasmid PAGR_p, complete sequence) position: , mismatch: 8, identity: 0.778

gccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
gtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
*.*...* ****************** * ****** 

229. spacer 36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT matches to CP054909 (Pantoea ananatis strain FDAARGOS_680 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.778

gccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
gtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
*.*...* ****************** * ****** 

230. spacer 36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022429 (Pantoea ananatis strain YJ76 plasmid p_unamed1) position: , mismatch: 8, identity: 0.778

gccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
gtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
*.*...* ****************** * ****** 

231. spacer 36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022429 (Pantoea ananatis strain YJ76 plasmid p_unamed1) position: , mismatch: 8, identity: 0.778

gccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
gtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
*.*...* ****************** * ****** 

232. spacer 36.204|1981158|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP035036 (Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.778

gccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
gtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
*.*...* ****************** * ****** 

233. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 8, identity: 0.771

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
tggagggcgccatcgccgccctgcgcgaggccggc	Protospacer
* *.* ************** .*********  * 

234. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
tggagggcgccatcgccgccctgcgcgaggccggc	Protospacer
* *.* ************** .*********  * 

235. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP033227 (Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence) position: , mismatch: 8, identity: 0.771

tcgggcgcgccatcgccgccgcgcgcgagg-cgcgg	CRISPR spacer
cgacccgcgccatcgcgaccgcgcgcgaggtcgcg-	Protospacer
. .  *********** .************ **** 

236. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP044080 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.771

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
tggagggcgccatcgccgccctgcgcgaggccggc	Protospacer
* *.* ************** .*********  * 

237. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP031082 (Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence) position: , mismatch: 8, identity: 0.771

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
tggagggcgccatcgccgccctgcgcgaggccggc	Protospacer
* *.* ************** .*********  * 

238. spacer 36.227|1982843|32|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

attgcccggaggggcgcgccttgcgtatcagg	CRISPR spacer
gatgcccgtaggggtgcgccttgcgctgctgg	Protospacer
. ****** *****.**********.  * **

239. spacer 36.229|1982986|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP006370 (Aureimonas sp. AU20 plasmid pAU20c, complete sequence) position: , mismatch: 8, identity: 0.771

tccttgggcgtgcgcctcttcgtcttcgtcagggc	CRISPR spacer
ctcttccgcgtgcgcctcttcgtcttcgcctatgc	Protospacer
..***  *********************.* . **

240. spacer 36.232|1983204|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.778

gccctcgcgccgcccggcagccggatc--gccccgacc	CRISPR spacer
gccctcgcgccgtacggcagccggatcgagtactgg--	Protospacer
************. *************  *. *.*.  

241. spacer 49.6|2544558|40|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 8, identity: 0.8

gtgagaatttccatctcctcctctgtcagcagcgcgcgca-	CRISPR spacer
acgaggatttccatctcctcctcggtcagc-gcgccgtcat	Protospacer
..***.***************** ****** ****   ** 

242. spacer 67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP018064 (Rhodococcus sp. 2G plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.784

gatcatcgccgccgccatcgtcggcctcgagaagctc	CRISPR spacer
cagcatcgccgccgccatcgtcgcactcgtggcgatc	Protospacer
 * ********************  **** *. * **

243. spacer 67.42|3450537|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 8, identity: 0.778

gggtggcc---gcggtcgagcgggccgcagaccagcgcg	CRISPR spacer
---tgcccagggcggtcgagcgggccgaagcccagcggt	Protospacer
   ** **   **************** ** ******  

244. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 8, identity: 0.789

tcggcg-ccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
-cgtcgcccggcggcggggcggacggcggggcggacggc	Protospacer
 ** ** ***************.****** ****   *.

245. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.789

tcggcgccggcggcggggcgggcggcggcgcggcgcgt-	CRISPR spacer
cttgcgccggcggcggcgctggcggcggcgt-tcgcgtc	Protospacer
.. ************* ** **********.  ***** 

246. spacer 67.79|3451516|36|NC_009767|PILER-CR matches to NZ_CP045310 (Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
cgccgaggcgctggcccggctgctcgccggccgcga	Protospacer
   ********* ** ***************  ** 

247. spacer 67.79|3451516|36|NC_009767|PILER-CR matches to NZ_CP045310 (Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
cgccgaggcgctggcccggctgctcgccggccgcga	Protospacer
   ********* ** ***************  ** 

248. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.714

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
caaggccgccgccgcccgcgctgcggtc	Protospacer
..   ***************** ***..

249. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 8, identity: 0.714

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
caaggccgccgccgcccgcgctgcggtc	Protospacer
..   ***************** ***..

250. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to NZ_CP026517 (Deinococcus sp. NW-56 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.714

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
actggccgccgccgcccgcgctccggtg	Protospacer
  .  *****************.***. 

251. spacer 73.1|3771177|28|NC_009767|CRISPRCasFinder matches to JQ680373 (Unidentified phage clone 2209_scaffold64 genomic sequence) position: , mismatch: 8, identity: 0.714

tgcctccgccgccgcccgcgcttcggct	CRISPR spacer
ccgctccgccgccgcctgcgcttccttg	Protospacer
.  *************.*******  . 

252. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaggccgccgccgtcgcgcgcctc	Protospacer
   .****.********** *******. *

253. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaggccgccgccgtcgcgcgcctc	Protospacer
   .****.********** *******. *

254. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcacgcctc	Protospacer
   .*************** ***.***. *

255. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
agatcgcgcgccgccgccggcgcgctgaag	Protospacer
. *****. ****************   * 

256. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
gcatcgccagccgctgccggcgcatccact	Protospacer
******* ******.********.. *  .

257. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP015738 (Shinella sp. HZN7 plasmid pShin-02, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
gcaccgaaagccgccgccggcgcaatcccg	Protospacer
***.** ****************.  *.  

258. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaggccgccgccgtcgcgcgcctc	Protospacer
   .****.********** *******. *

259. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaggccgccgccgtcgcgcgcctc	Protospacer
   .****.********** *******. *

260. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcacgcctc	Protospacer
   .*************** ***.***. *

261. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
ggggacgaagccgccgccggcccgcgcgac	Protospacer
* .    ************** ***** **

262. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP023551 (Rhodobacter sp. CZR27 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
gacccccaagcggccgccggcgcgcgcccg	Protospacer
*  .* ***** ***************.  

263. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaggccgccgccgtcgcgcgcctc	Protospacer
   .****.********** *******. *

264. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaggccgccgccgtcgcgcgcctc	Protospacer
   .****.********** *******. *

265. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaggccgccgccgtcgcgcgcctc	Protospacer
   .****.********** *******. *

266. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaggccgccgccgtcgcgcgcctc	Protospacer
   .****.********** *******. *

267. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaggccgccgccgtcgcgcgcctc	Protospacer
   .****.********** *******. *

268. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
attgcggcggccgcctccggcgcgcgctac	Protospacer
..  **  .****** **************

269. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaagccgccgccgtcgcacgcctc	Protospacer
   .*************** ***.***. *

270. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
cacccgcaggccgccgccgtcgcgcgcctc	Protospacer
   .****.********** *******. *

271. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to KP966108 (Burkholderia phage vB_BceM_AP3, complete genome) position: , mismatch: 8, identity: 0.733

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
gatttccatgccgccgccggcgcgcgcacg	Protospacer
*  *. ** ******************   

272. spacer 82.39|4300103|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to MK801721 (Gordonia phage William, complete genome) position: , mismatch: 8, identity: 0.771

tccgcggcggcggcggcgatgctcatcacgcgatg	CRISPR spacer
tccgcggcggcggccgcgatggtcatggcgggcga	Protospacer
************** ****** **** .** *  .

273. spacer 82.39|4300103|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 8, identity: 0.771

tccgcggcggcggcggcgatgctcatca-cgcgatg	CRISPR spacer
atggcggcgtcggcggcgatgcccatcagcccgac-	Protospacer
 . ****** ************.***** * ***. 

274. spacer 82.131|4306762|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 8, identity: 0.765

agacgacaaccgcgccgcgcagcgcctggacgga	CRISPR spacer
cgacaaagcccgcggcgcgcagcgcctgggcggc	Protospacer
 ***.* . ***** **************.*** 

275. spacer 82.151|4308212|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 8, identity: 0.771

cgcagcgcctggatgtcatccagcgagcgcaacac	CRISPR spacer
agcatcgcctggatgtcatccagcgaggctttcag	Protospacer
 *** **********************  .  ** 

276. spacer 98.1|5453130|28|NC_009767|CRT matches to MG720309 (Vibrio phage Ares1, complete genome) position: , mismatch: 8, identity: 0.714

cgagatttatctcgcatttgtggcgcga	CRISPR spacer
attaatgtatctcgcatttgtggcgacc	Protospacer
   .** ******************   

277. spacer 98.2|5453194|34|NC_009767|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.765

tatctcgcaacgaggcgcgcggcgcgcggcgcgc	CRISPR spacer
gcgcgcggcgcgcggcgcgcggcgcgcggcgcgc	Protospacer
   * **  .** *********************

278. spacer 3.1|288119|32|NC_009767|CRISPRCasFinder matches to NZ_CP043507 (Acetobacter sp. KACC 21233 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgtaatggttcgtgcactggcgcttcagcaga	CRISPR spacer
gcgaatggttcgtgcacctgcgcttccccggc	Protospacer
   **************. *******  *.* 

279. spacer 10.1|665221|31|NC_009767|CRISPRCasFinder matches to NZ_CP040762 (Paracoccus sp. 2251 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

tcccacgctgcgcccaactgcggcgccaacc	CRISPR spacer
caccacgctgcgcccgcctgcggcggtgaag	Protospacer
. *************. ******** ..*  

280. spacer 17.1|951666|37|NC_009767|CRISPRCasFinder matches to NC_042342 (Pseudomonas virus H66, complete genome) position: , mismatch: 9, identity: 0.757

gccggctagccggcgcgcaatctcatcaggattggca	CRISPR spacer
gcgcacggcccggcgcgcgaactcatcaggattggcc	Protospacer
**  .* . *********.* *************** 

281. spacer 21.11|1001744|42|NC_009767|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 9, identity: 0.786

atggtcgggcgcctcgcgcctcgcgcctcgcgcctcgcacct-------	CRISPR spacer
-------cgcgcctcgcgcctcgcgcctcgcgcctcgcgcctcgcgcct	Protospacer
        ******************************.***       

282. spacer 21.11|1001744|42|NC_009767|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 9, identity: 0.786

atggtcgggcgcctcgcgcctcgcgcctcgcgcctcgcacct-------	CRISPR spacer
-------cgcgcctcgcgcctcgcgcctcgcgcctcgcgcctcgcgcct	Protospacer
        ******************************.***       

283. spacer 21.11|1001744|42|NC_009767|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 9, identity: 0.786

atggtcgggcgcctcgcgcctcgcgcctcgcgcctcgcacct-------	CRISPR spacer
-------cgcgcctcgcgcctcgcgcctcgcgcctcgcgcctcgcgcgg	Protospacer
        ******************************.***       

284. spacer 21.11|1001744|42|NC_009767|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 9, identity: 0.786

atggtcgggc-----gcctcgcgcctcgcgcctcgcgcctcgcacct	CRISPR spacer
-----cgagtatccagccccgcgcctcgcgcctcgcgcctcgcgcct	Protospacer
     **.*.     ***.************************.***

285. spacer 21.12|1001820|32|NC_009767|CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cttgcctcgcgcctcgcgcgcctcacaccccg	CRISPR spacer
ctggccttgcgcctcgcgcgcctgggcggcgg	Protospacer
** ****.*************** .    * *

286. spacer 21.14|1001941|35|NC_009767|CRT matches to NZ_CP011518 (Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence) position: , mismatch: 9, identity: 0.743

atggtcgggcgcctcgcgcctcgcgcctcttgcct	CRISPR spacer
ctggtcggccgcctcgcgccacgcgcgccgtgagc	Protospacer
 ******* *********** ***** .* **  .

287. spacer 21.14|1001941|35|NC_009767|CRT matches to NC_019746 (Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence) position: , mismatch: 9, identity: 0.743

atggtcgggcgcctcgcgcctcgcgcctcttgcct	CRISPR spacer
gttgcctcttgcctctcgcctctcgcctcttgcct	Protospacer
.* *.*   .***** ****** ************

288. spacer 21.17|1002141|32|NC_009767|CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cttgcctcgcgcctcgcgcgcctcacaccccg	CRISPR spacer
ctggccttgcgcctcgcgcgcctgggcggcgg	Protospacer
** ****.*************** .    * *

289. spacer 35.1|1960436|33|NC_009767|CRISPRCasFinder matches to HQ332138 (Paenibacillus phage PG1 genomic sequence) position: , mismatch: 9, identity: 0.727

gtatatctctcctttgggggtaaatggcgctct	CRISPR spacer
ctttatcgctcctttgggggttaatgggttaat	Protospacer
 * **** ************* *****  .  *

290. spacer 36.34|1978010|37|NC_009767|PILER-CR matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 9, identity: 0.757

tgagacgccgaactcggacgtcaaccgtgtggaacgc	CRISPR spacer
cgagacgccgatctcgaacgtcaaccgcacggtgggc	Protospacer
.********** ****.**********...** . **

291. spacer 36.77|1981157|37|NC_009767|PILER-CR matches to NC_017533 (Pantoea ananatis AJ13355 plasmid pEA320, complete sequence) position: , mismatch: 9, identity: 0.757

tgccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
ggtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
 *.*...* ****************** * ****** 

292. spacer 36.77|1981157|37|NC_009767|PILER-CR matches to NZ_CP014208 (Pantoea ananatis strain R100 plasmid, complete sequence) position: , mismatch: 9, identity: 0.757

tgccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
ggtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
 *.*...* ****************** * ****** 

293. spacer 36.77|1981157|37|NC_009767|PILER-CR matches to CP054909 (Pantoea ananatis strain FDAARGOS_680 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

tgccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
ggtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
 *.*...* ****************** * ****** 

294. spacer 36.77|1981157|37|NC_009767|PILER-CR matches to NZ_CP035036 (Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.757

tgccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
ggtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
 *.*...* ****************** * ****** 

295. spacer 36.77|1981157|37|NC_009767|PILER-CR matches to NC_016817 (Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence) position: , mismatch: 9, identity: 0.757

tgccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
ggtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
 *.*...* ****************** * ****** 

296. spacer 36.77|1981157|37|NC_009767|PILER-CR matches to NZ_CP020944 (Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence) position: , mismatch: 9, identity: 0.757

tgccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
ggtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
 *.*...* ****************** * ****** 

297. spacer 36.77|1981157|37|NC_009767|PILER-CR matches to NC_017553 (Pantoea ananatis PA13 plasmid PAGR_p, complete sequence) position: , mismatch: 9, identity: 0.757

tgccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
ggtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
 *.*...* ****************** * ****** 

298. spacer 36.77|1981157|37|NC_009767|PILER-CR matches to NZ_CP022429 (Pantoea ananatis strain YJ76 plasmid p_unamed1) position: , mismatch: 9, identity: 0.757

tgccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
ggtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
 *.*...* ****************** * ****** 

299. spacer 36.77|1981157|37|NC_009767|PILER-CR matches to NZ_CP022429 (Pantoea ananatis strain YJ76 plasmid p_unamed1) position: , mismatch: 9, identity: 0.757

tgccgattggaagcggcgcgctcgatgtggatgagcg	CRISPR spacer
ggtcagcttgaagcggcgcgctcgatgggcatgagct	Protospacer
 *.*...* ****************** * ****** 

300. spacer 36.105|1983203|37|NC_009767|PILER-CR matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.757

tgccctcgcgccgcccggcagccggatc--gccccgacc	CRISPR spacer
cgccctcgcgccgtacggcagccggatcgagtactgg--	Protospacer
.************. *************  *. *.*.  

301. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 9, identity: 0.735

-----gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
cgagagc-----atgccgtgcgcgggttgtgtgcatggc	Protospacer
     **     *.************ *******.*** 

302. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP011248 (Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence) position: , mismatch: 9, identity: 0.743

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
ccgagcgcgccatcgccgccgcgcgccgcgccttt	Protospacer
.**.********************** . ** .  

303. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 9, identity: 0.743

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
aggtgcgcgccaacgccgccgtgcgcgaggcctac	Protospacer
  * ******** ********.********* .. 

304. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP032919 (Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence) position: , mismatch: 9, identity: 0.743

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
ccgagcgcgccatcgccgccgcgcgccgcgccttt	Protospacer
.**.********************** . ** .  

305. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP033029 (Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence) position: , mismatch: 9, identity: 0.743

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
ccgagcgcgccatcgccgccgcgcgccgcgccttt	Protospacer
.**.********************** . ** .  

306. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
ttgagcgcgccgtcgccgcggcgcgcgagggattt	Protospacer
*.*.*******.******* ********** ..  

307. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP016620 (Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.743

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
ccctccacgccatcgcggccgcgcgcgaggggctc	Protospacer
.*   *.********* ************* **  

308. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP029986 (Sphingomonas sp. FARSPH plasmid p01, complete sequence) position: , mismatch: 9, identity: 0.743

tcgggcgcgccatcgccgccgcgcgcgagg-cgcgg	CRISPR spacer
cgacccgcgcgatcgccgccgcgcgcgcggtcgca-	Protospacer
. .  ***** **************** ** ***. 

309. spacer 36.233|1983277|35|NC_009767|CRISPRCasFinder,CRT matches to NC_017543 (Paenibacillus polymyxa M1 plasmid pPPM1a, complete sequence) position: , mismatch: 9, identity: 0.743

cgtttccgtcgttttttgtgcgatgatgatgatgc	CRISPR spacer
cttcctcaacgttttttgtgcgttgataatgatgt	Protospacer
* *...*. ************* ****.******.

310. spacer 36.250|1984526|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 9, identity: 0.757

tcggattgcggcgctgccggatgaaatacagctcgac	CRISPR spacer
gcggattgcgccgctggcggatgaaatggatcgcagc	Protospacer
 ********* ***** **********. * * *..*

311. spacer 44.1|2243222|35|NC_009767|CRISPRCasFinder matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

tgaccggcgtgctgcgtgccccaccgaagcgctca	CRISPR spacer
tcgacgagccgctgcgtgccccactgcagcgctca	Protospacer
* . **.  .**************.* ********

312. spacer 49.33|2546619|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NC_023007 (Bacillus phage vB_BanS-Tsamsa, complete genome) position: , mismatch: 9, identity: 0.735

tcaaagacccatataatcattcccctctgtgtct	CRISPR spacer
tttctgttccatattatcattcccctttgtgttt	Protospacer
*.   * .****** ***********.*****.*

313. spacer 49.33|2546619|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to MK288021 (Bacillus phage pW2, complete genome) position: , mismatch: 9, identity: 0.735

tcaaagacccatataatcattcccctctgtgtct	CRISPR spacer
tttctgttccatattatcattcccctttgtgttt	Protospacer
*.   * .****** ***********.*****.*

314. spacer 67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031082 (Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence) position: , mismatch: 9, identity: 0.757

gaccggca----gaccgaggagcacagcgcccgcgccatgt	CRISPR spacer
----agcaccgcggccgaggtgcacagcgcccgcaccatgc	Protospacer
    .***    *.****** *************.*****.

315. spacer 67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 9, identity: 0.757

gaccggca----gaccgaggagcacagcgcccgcgccatgt	CRISPR spacer
----agcaccgcggccgaggtgcacagcgcccgcaccatgc	Protospacer
    .***    *.****** *************.*****.

316. spacer 67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

gaccggca----gaccgaggagcacagcgcccgcgccatgt	CRISPR spacer
----agcaccgcggccgaggtgcacagcgcccgcaccatgc	Protospacer
    .***    *.****** *************.*****.

317. spacer 67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044080 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.757

gaccggca----gaccgaggagcacagcgcccgcgccatgt	CRISPR spacer
----agcaccgcggccgaggtgcacagcgcccgcaccatgc	Protospacer
    .***    *.****** *************.*****.

318. spacer 67.42|3450537|36|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.75

gggtggccgcggtcgagcgggccgcagaccagcgcg	CRISPR spacer
agtgaggcgccgtcgagcgggccgccgaccagcact	Protospacer
.*  .* *** ************** *******.* 

319. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.763

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
cggccgccggcggcggcgcggacggcggcgcggacggc	Protospacer
. * ************ ****.***********   *.

320. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.763

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
gagcaggcggcggcggtgcggggggcggcgcggcgggc	Protospacer
  *  * ********* ***** ************ *.

321. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020556 (Streptomyces sp. Sge12 plasmid pSGE, complete sequence) position: , mismatch: 9, identity: 0.763

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
aggtggccggcgtcgtggcgggcggcggcgcggtgtgg	Protospacer
  *  ******* ** *****************.*.* 

322. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NC_019958 (Mycobacterium sp. JS623 plasmid pMYCSM02, complete sequence) position: , mismatch: 9, identity: 0.763

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
ccggcgccggtggcggggcgggctgcggggggttgcca	Protospacer
.*********.************ **** * * .**  

323. spacer 67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP045310 (Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence) position: , mismatch: 9, identity: 0.757

ggcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
acgccgaggcgctggcccggctgctcgccggccgcga	Protospacer
.   ********* ** ***************  ** 

324. spacer 67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP045310 (Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence) position: , mismatch: 9, identity: 0.757

ggcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
acgccgaggcgctggcccggctgctcgccggccgcga	Protospacer
.   ********* ** ***************  ** 

325. spacer 67.79|3451516|36|NC_009767|PILER-CR matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 9, identity: 0.75

gcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
tggcgaggcgcttgagcggctgcacgccaacaacat	Protospacer
  ************ ******** ****..** *..

326. spacer 67.79|3451516|36|NC_009767|PILER-CR matches to NZ_CP018573 (Marivivens sp. JLT3646 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.75

gcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
gcgcgaggcgctatcgcggctgctcgttgaaaacct	Protospacer
************  ************..*. * * .

327. spacer 67.79|3451516|36|NC_009767|PILER-CR matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 9, identity: 0.75

gcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
cctggaggcgctcgcgcggctgctcgacgggacggg	Protospacer
 *  ********.************* *** *. * 

328. spacer 72.1|3710689|34|NC_009767|CRISPRCasFinder matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ataacgcgctgtggaacgacacgctggtaaaaat	CRISPR spacer
aagacgcgctgcggatcgacacgctggaagccac	Protospacer
* .********.*** *********** *.  *.

329. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 9, identity: 0.7

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
ggtgcgcaacccgccgccggcgcgctacgt	Protospacer
*   ***** ***************  ...

330. spacer 80.1|4221663|30|NC_009767|CRISPRCasFinder matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 9, identity: 0.7

gcatcgcaagccgccgccggcgcgcgctac	CRISPR spacer
atgaagcaagccgccgccggggcgctctga	Protospacer
...  *************** **** **. 

331. spacer 82.1|4297350|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 9, identity: 0.743

aatgattgaaccaatccgccgcctgggccagccag	CRISPR spacer
gctgctcccaccaatgcaccgcctgggccagccac	Protospacer
. ** *.  ****** *.**************** 

332. spacer 82.62|4301771|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 9, identity: 0.75

aaactcgcg-cgcgcgggcgaggagggggtcgtcgga	CRISPR spacer
-ggccagcaccgcgcgggcggggtgggggtcgtcggc	Protospacer
 ..*. **. **********.** ************ 

333. spacer 82.72|4302497|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to MH155878 (Streptomyces phage RavenPuff, complete genome) position: , mismatch: 9, identity: 0.75

ttgacgtgcgtgtccggcgtctcacgcgacgctgct	CRISPR spacer
gcgacgtccgtgtccagcgtctcacgcgcgcgggct	Protospacer
 .***** *******.************     ***

334. spacer 82.72|4302497|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to MH155869 (Streptomyces phage HotFries, complete genome) position: , mismatch: 9, identity: 0.75

ttgacgtgcgtgtccggcgtctcacgcgacgctgct	CRISPR spacer
gcgacgtccgtgtccagcgtctcacgcgcgcgggct	Protospacer
 .***** *******.************     ***

335. spacer 82.72|4302497|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to MH155872 (Streptomyces phage Moozy, complete genome) position: , mismatch: 9, identity: 0.75

ttgacgtgcgtgtccggcgtctcacgcgacgctgct	CRISPR spacer
gcgacgtccgtgtccagcgtctcacgcgcgcgggct	Protospacer
 .***** *******.************     ***

336. spacer 82.72|4302497|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to MK686070 (Streptomyces phage PherryCruz, complete genome) position: , mismatch: 9, identity: 0.75

ttgacgtgcgtgtccggcgtctcacgcgacgctgct	CRISPR spacer
gcgacgtccgtgtccagcgtctcacgcgcgcgggct	Protospacer
 .***** *******.************     ***

337. spacer 82.91|4303870|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcgcgacttgacgcgcgacctgatgctctgggg	CRISPR spacer
cgcgcgacttgccgcgcgaccagatgatggacgc	Protospacer
* ********* ********* **** *  . * 

338. spacer 82.131|4306762|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 9, identity: 0.735

agacgacaaccgcgccgcgcagcgcctggacgga	CRISPR spacer
cgccgtgcgccgcgccgcgccgcgcctgggcggc	Protospacer
 * **   .*********** ********.*** 

339. spacer 82.194|4311326|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 9, identity: 0.743

aggtcgagcgcgagttgcctcacgtcctcaagtga	CRISPR spacer
atgtcgagcgcgagttgccgcacctcctggtgctg	Protospacer
* ***************** *** **** . *. .

340. spacer 82.194|4311326|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 9, identity: 0.743

aggtcgagcgcgagttgcctcacgtcctcaagtga	CRISPR spacer
atgtcgagcgcgagttgccgcacctcctggtgctg	Protospacer
* ***************** *** **** . *. .

341. spacer 98.2|5453194|34|NC_009767|CRT matches to NZ_CP029828 (Burkholderia sp. JP2-270 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.735

tatctcgcaacgaggcgcgcggcgcgcggcgcgc	CRISPR spacer
tcaggcggcacgaagcgcgcgacgcgcggcgcgg	Protospacer
*    **  ****.*******.*********** 

342. spacer 1.1|142967|33|NC_009767|CRISPRCasFinder matches to NZ_CP017303 (Rhodococcus sp. YL-1 plasmid pYLL1 sequence) position: , mismatch: 10, identity: 0.697

tctgtcgcgcctgtacgcccgcattgctcagac	CRISPR spacer
gacgtcgcgcatgtacgcccgcatagccgccag	Protospacer
  .******* ************* **.   * 

343. spacer 1.1|142967|33|NC_009767|CRISPRCasFinder matches to NZ_CP042915 (Rhodococcus qingshengii strain RL1 plasmid unnamed2) position: , mismatch: 10, identity: 0.697

tctgtcgcgcctgtacgcccgcattgctcagac	CRISPR spacer
gacgtcgcgcatgtacgcccgcatagccgccag	Protospacer
  .******* ************* **.   * 

344. spacer 3.1|288119|32|NC_009767|CRISPRCasFinder matches to NZ_CP010589 (Phaeobacter gallaeciensis strain P11 plasmid pP11_a, complete sequence) position: , mismatch: 10, identity: 0.688

tgtaatggttcgtgcactggcgcttcagcaga	CRISPR spacer
ccgtccggttcgtccacgggcgcttcagcacc	Protospacer
.    .******* *** ************  

345. spacer 3.1|288119|32|NC_009767|CRISPRCasFinder matches to NZ_CP021041 (Phaeobacter gallaeciensis strain P129 plasmid pP129_a, complete sequence) position: , mismatch: 10, identity: 0.688

tgtaatggttcgtgcactggcgcttcagcaga	CRISPR spacer
ccgtccggttcgtccacgggcgcttcagcacc	Protospacer
.    .******* *** ************  

346. spacer 3.1|288119|32|NC_009767|CRISPRCasFinder matches to NZ_CP010674 (Phaeobacter gallaeciensis strain P75 plasmid pP75_a, complete sequence) position: , mismatch: 10, identity: 0.688

tgtaatggttcgtgcactggcgcttcagcaga	CRISPR spacer
ccgtccggttcgtccacgggcgcttcagcacc	Protospacer
.    .******* *** ************  

347. spacer 3.1|288119|32|NC_009767|CRISPRCasFinder matches to NC_023138 (Phaeobacter gallaeciensis DSM 26640 plasmid pGal_A255, complete sequence) position: , mismatch: 10, identity: 0.688

tgtaatggttcgtgcactggcgcttcagcaga	CRISPR spacer
ccgtccggttcgtccacgggcgcttcagcacc	Protospacer
.    .******* *** ************  

348. spacer 3.1|288119|32|NC_009767|CRISPRCasFinder matches to NZ_CP010637 (Phaeobacter gallaeciensis strain P73 plasmid pP73_a, complete sequence) position: , mismatch: 10, identity: 0.688

tgtaatggttcgtgcactggcgcttcagcaga	CRISPR spacer
ccgtccggttcgtccacgggcgcttcagcacc	Protospacer
.    .******* *** ************  

349. spacer 21.14|1001941|35|NC_009767|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 10, identity: 0.714

atggtcgggcgcctcgcgcctcgcgcctcttgcct-------	CRISPR spacer
-------cgcgcctcgcgcctcgcgcctcgcgcctcgcgcct	Protospacer
        ********************* .****       

350. spacer 21.14|1001941|35|NC_009767|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 10, identity: 0.714

atggtcgggcgcctcgcgcctcgcgcctcttgcct-------	CRISPR spacer
-------cgcgcctcgcgcctcgcgcctcgcgcctcgcgcct	Protospacer
        ********************* .****       

351. spacer 21.14|1001941|35|NC_009767|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 10, identity: 0.714

atggtcgggcgcctcgcgcctcgcgcctcttgcct-------	CRISPR spacer
-------cgcgcctcgcgcctcgcgcctcgcgcctcgcgcct	Protospacer
        ********************* .****       

352. spacer 36.18|1976840|37|NC_009767|PILER-CR matches to NZ_CP017280 (Enterobacter ludwigii strain EN-119 plasmid pEN-119, complete sequence) position: , mismatch: 10, identity: 0.73

ttccatgccgatgaaccgcccttgcgcgtcaaagaag	CRISPR spacer
ttttatgccgatgaaccgcgcctgcgcgtcggtggcc	Protospacer
**..*************** *.********.. *.  

353. spacer 36.85|1981741|36|NC_009767|PILER-CR matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
gaggtgcgcgccaacgccgccgtgcgcgaggcctac	Protospacer
   * ******** ********.********* .. 

354. spacer 36.85|1981741|36|NC_009767|PILER-CR matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
attgagcgcgccgtcgccgcggcgcgcgagggattt	Protospacer
 *.*.*******.******* ********** ..  

355. spacer 36.85|1981741|36|NC_009767|PILER-CR matches to NZ_CP016620 (Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
accctccacgccatcgcggccgcgcgcgaggggctc	Protospacer
 .*   *.********* ************* **  

356. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcatgttgttgccgatgccgacaccgatgatg	Protospacer
     .*.*     *****.*.******************.*

357. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
     .*.*     *****.*.******************.*

358. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
     .*.*     *****.*.******************.*

359. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcatgttgttgccgatgccgacaccgatgatg	Protospacer
     .*.*     *****.*.******************.*

360. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
     .*.*     *****.*.******************.*

361. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcgtgttgtggccgatgccgacaccgatgatg	Protospacer
     .*.*     ***** *.******************.*

362. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcgtgttgtggccgatgccgacaccgatgatg	Protospacer
     .*.*     ***** *.******************.*

363. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
     .*.*     *****.*.******************.*

364. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
     .*.*     *****.*.******************.*

365. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
     .*.*     *****.*.******************.*

366. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcatgttgttgccgatgccgacaccgatgatg	Protospacer
     .*.*     *****.*.******************.*

367. spacer 36.87|1981886|37|NC_009767|PILER-CR matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tctacgttg-----gttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
-----atcgatcatgttgttgccgatgccgacaccgatgatg	Protospacer
     .*.*     *****.*.******************.*

368. spacer 36.91|1982181|37|NC_009767|PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 10, identity: 0.73

tcgatcacattgggcgcgccgagcgcggccagcgtcg	CRISPR spacer
tcgatcacatggtgcgcgccgagcgccttcacccaat	Protospacer
********** * *************  .** *    

369. spacer 36.145|1976841|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP017280 (Enterobacter ludwigii strain EN-119 plasmid pEN-119, complete sequence) position: , mismatch: 10, identity: 0.722

tccatgccgatgaaccgcccttgcgcgtcaaagaag	CRISPR spacer
tttatgccgatgaaccgcgcctgcgcgtcggtggcc	Protospacer
*..*************** *.********.. *.  

370. spacer 36.177|1979182|36|NC_009767|CRISPRCasFinder,CRT matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 10, identity: 0.722

tcgccgccgcgcgcctgaaccgtcacgcgccgttgc	CRISPR spacer
ccgtgtccgcgcgcctcgaccgtcacgcgccgaaat	Protospacer
.**.  ********** .**************  ..

371. spacer 36.196|1980572|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP015738 (Shinella sp. HZN7 plasmid pShin-02, complete sequence) position: , mismatch: 10, identity: 0.722

actactggctgctcgcgcgcgatccccccgcgcgca	CRISPR spacer
gcgcctggctgcccgcgcgcgatcccgccgtcacct	Protospacer
.*  ********.************* ***.   * 

372. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP039899 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence) position: , mismatch: 10, identity: 0.714

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
ccgagcgcgccattgccgccgcgcgccgcgccttt	Protospacer
.**.*********.************ . ** .  

373. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.714

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
atccgcgcgccctcgccgccgcgctcgagcggctc	Protospacer
 .  ******* ************ ****  **  

374. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP039890 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence) position: , mismatch: 10, identity: 0.714

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
ccgagcgcgccattgccgccgcgcgccgcgccttt	Protospacer
.**.*********.************ . ** .  

375. spacer 36.218|1982182|36|NC_009767|CRISPRCasFinder,CRT matches to MT740745 (Ralstonia phage Raharianne, complete genome) position: , mismatch: 10, identity: 0.722

cgatcacattgggcgcgccgagcgcggccagcgtcg	CRISPR spacer
ccggggcattggccgcggcgagcgcggccagcaatg	Protospacer
* .  .****** **** **************. .*

376. spacer 36.218|1982182|36|NC_009767|CRISPRCasFinder,CRT matches to MT740726 (Ralstonia phage Albius, complete genome) position: , mismatch: 10, identity: 0.722

cgatcacattgggcgcgccgagcgcggccagcgtcg	CRISPR spacer
ccggggcattggccgcggcgagcgcggccagcaatg	Protospacer
* .  .****** **** **************. .*

377. spacer 36.218|1982182|36|NC_009767|CRISPRCasFinder,CRT matches to MT740743 (Ralstonia phage Hyacinthe, complete genome) position: , mismatch: 10, identity: 0.722

cgatcacattgggcgcgccgagcgcggccagcgtcg	CRISPR spacer
ccggggcattggtcgcggcgagcgcggccagcaatg	Protospacer
* .  .****** **** **************. .*

378. spacer 36.229|1982986|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 10, identity: 0.714

tccttgggcgtgcgcctcttcgtcttcgtcagggc	CRISPR spacer
gccttgggcgtgcgcttcatcgtcttgcggtcgac	Protospacer
 **************.** *******      *.*

379. spacer 36.229|1982986|35|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP028970 (Aminobacter sp. MSH1 plasmid pUSP2, complete sequence) position: , mismatch: 10, identity: 0.714

tccttgggcgtgcgcctcttcgtcttcgtcagggc	CRISPR spacer
agccagggcgagcgcatcttcgtcttcgtccgcca	Protospacer
  *. ***** **** ************** *   

380. spacer 36.237|1983573|35|NC_009767|CRISPRCasFinder,CRT matches to NC_014811 (Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence) position: , mismatch: 10, identity: 0.714

tttaacgccagcatcgccaggctctcgaactcgtc	CRISPR spacer
cgttgagccagcatcgccagaatctcgaactccgt	Protospacer
. * . **************. **********  .

381. spacer 44.1|2243222|35|NC_009767|CRISPRCasFinder matches to NC_009339 (Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence) position: , mismatch: 10, identity: 0.714

tgaccggcgtgctgcgtgccccaccgaagcgctca	CRISPR spacer
agaccggcgtgcagggtgccccaccgggctccgaa	Protospacer
 *********** * ***********.. . *  *

382. spacer 49.53|2548140|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035092 (Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.737

cgaagccactctcgcgcaggcgcgcgcggcggcgtatg	CRISPR spacer
gagcggcacgcccgcgcaggcgcgcgcggcggccgagg	Protospacer
 .. * *** *.*********************  * *

383. spacer 49.53|2548140|38|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NC_008688 (Paracoccus denitrificans PD1222 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.737

cgaagccactctcgcgcaggcgcgcgcggcggcgtatg	CRISPR spacer
gagcggcacgcccgcgcaggcgcgcgcggcggccgagg	Protospacer
 .. * *** *.*********************  * *

384. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

385. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

386. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

387. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

388. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

389. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

390. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

391. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

392. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

393. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

394. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

395. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

396. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

397. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

398. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

399. spacer 55.1|2986680|36|NC_009767|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgcaagggcatggccgagatgcgccgcaatgaga	CRISPR spacer
cgggcaaggccgtggccgagatgcgccgcgtggtgc	Protospacer
.  ****** *.*****************.  * * 

400. spacer 67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NC_019846 (Sinorhizobium meliloti GR4 plasmid pRmeGR4a, complete sequence) position: , mismatch: 10, identity: 0.73

gaccggcagaccgaggagcacagcgcccgcgccatgt	CRISPR spacer
gagcactctgccgaggagcacagagcgcgcgccatgc	Protospacer
** *. .  .************* ** *********.

401. spacer 67.5|3447784|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021826 (Sinorhizobium meliloti strain KH35c plasmid accessoryA, complete sequence) position: , mismatch: 10, identity: 0.73

gaccggcagaccgaggagcacagcgcccgcgccatgt	CRISPR spacer
gagcactctgccgaggagcacagagcgcgcgccatgc	Protospacer
** *. .  .************* ** *********.

402. spacer 67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX443401 (Rhodococcus hoagii strain PAM1572 plasmid pVAPN1572, complete sequence) position: , mismatch: 10, identity: 0.737

gggaaggggtggcccgcgtcgagcaggccgccgaccag	CRISPR spacer
ccgacgtggtggcccgcgtcgagcaggccggtgatgta	Protospacer
  ** * *********************** .**.  .

403. spacer 67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX443398 (Rhodococcus hoagii strain PAM1204 plasmid pVAPN1204, complete sequence) position: , mismatch: 10, identity: 0.737

gggaaggggtggcccgcgtcgagcaggccgccgaccag	CRISPR spacer
ccgacgtggtggcccgcgtcgagcaggccggtgatgta	Protospacer
  ** * *********************** .**.  .

404. spacer 67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP851975 (Rhodococcus hoagii strain PAM2012 plasmid pVAPN2012, complete sequence) position: , mismatch: 10, identity: 0.737

gggaaggggtggcccgcgtcgagcaggccgccgaccag	CRISPR spacer
ccgacgtggtggcccgcgtcgagcaggccggtgatgta	Protospacer
  ** * *********************** .**.  .

405. spacer 67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KF439868 (Rhodococcus hoagii strain PAM1571 plasmid pVAPN1571, complete sequence) position: , mismatch: 10, identity: 0.737

gggaaggggtggcccgcgtcgagcaggccgccgaccag	CRISPR spacer
ccgacgtggtggcccgcgtcgagcaggccggtgatgta	Protospacer
  ** * *********************** .**.  .

406. spacer 67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 10, identity: 0.737

gggaaggggtggcccgcgtcgagcaggccgccgaccag	CRISPR spacer
gtggcgacaccgcccgcggcgaggaggccgccgaccag	Protospacer
* *. *. .. ******* **** **************

407. spacer 67.35|3450011|40|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023152 (Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence) position: , mismatch: 10, identity: 0.75

ccgaccgagacgcccaagccgaccgagacgcccaagccgc	CRISPR spacer
ctcgccgagccgcccaacccgaccgagacgccgtactcga	Protospacer
*. .***** ******* **************  * .** 

408. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 10, identity: 0.737

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
ggcgagccggcggcggtgcgggcggtggcgcgggcctg	Protospacer
   * *********** ********.*******  *  

409. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 10, identity: 0.737

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
ggcgagccggcggcggtgcgggcggtggcgcgggcctg	Protospacer
   * *********** ********.*******  *  

410. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.737

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
ggcgagccggcggcggtgcgggcggtggcgcgggcctg	Protospacer
   * *********** ********.*******  *  

411. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 10, identity: 0.737

tcggcgccggcggcggggcgggcggc----ggcgcggcgcgt	CRISPR spacer
tcggcggcggcggcggcgcgggcggcgcaggctatggc----	Protospacer
****** ********* *********    * ...***    

412. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NC_001425 (Streptomyces flavovirens plasmid pSN22 DNA, complete sequence) position: , mismatch: 10, identity: 0.737

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
ctcgcgtcggcggcggcgcgggcggcggcgtcgcccag	Protospacer
.. ***.********* *************. ** *. 

413. spacer 67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 10, identity: 0.73

ggcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
ctggcgaggcgcttgagcggctgcacgccaacaacat	Protospacer
   ************ ******** ****..** *..

414. spacer 67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP018573 (Marivivens sp. JLT3646 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ggcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
tgcgcgaggcgctatcgcggctgctcgttgaaaacct	Protospacer
 ************  ************..*. * * .

415. spacer 67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 10, identity: 0.73

ggcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
ccctggaggcgctcgcgcggctgctcgacgggacggg	Protospacer
  *  ********.************* *** *. * 

416. spacer 67.76|3448459|33|NC_009767|PILER-CR matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 10, identity: 0.697

cccagagatcgagcgggtcatctggctggacaa	CRISPR spacer
cagcctgatcgaccgggtcatcgggctggagct	Protospacer
*     ****** ********* *******   

417. spacer 67.76|3448459|33|NC_009767|PILER-CR matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 10, identity: 0.697

cccagagatcgagcgggtcatctggctggacaa	CRISPR spacer
cagcctgatcgaccgggtcatcgggctggagct	Protospacer
*     ****** ********* *******   

418. spacer 72.1|3710689|34|NC_009767|CRISPRCasFinder matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ataacgcgctgtggaacgacacgctggtaaaaat	CRISPR spacer
gccacgcgctgtggaacgccgcgctggagcatgt	Protospacer
.. *************** *.****** . * .*

419. spacer 72.1|3710689|34|NC_009767|CRISPRCasFinder matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 10, identity: 0.706

ataacgcgctgtggaacgacacgctggtaaaaat	CRISPR spacer
gccacgcgctgtggaacgccgcgctggagcatgt	Protospacer
.. *************** *.****** . * .*

420. spacer 72.1|3710689|34|NC_009767|CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 10, identity: 0.706

ataacgcgctgtggaacgacacgctggtaaaaat	CRISPR spacer
tggccgcgctgtggaacggcacgccggtcacggt	Protospacer
  . **************.*****.*** * ..*

421. spacer 82.34|4299740|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 10, identity: 0.722

tcctcgctctacgacggcgaggacgggctggcagcc	CRISPR spacer
tggccgcgctacggcggcgaggacgggctgagcttc	Protospacer
*  .*** *****.****************.   .*

422. spacer 82.39|4300103|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

tccgcggcggcggcggcgatgctcatcacgcgatg	CRISPR spacer
ttgccggcgtcggcgacgatgctcatcacctcgtc	Protospacer
*.  ***** *****.************* . .* 

423. spacer 82.42|4300321|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to MN478374 (Bacteriophage Phobos, complete genome) position: , mismatch: 10, identity: 0.73

atctgctcatcgacctgggcgaggtgacgctgccgcc	CRISPR spacer
tccacttcatcgacctgcgcgaggagacgctgacccg	Protospacer
 .*  .*********** ****** ******* * * 

424. spacer 82.106|4304950|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 10, identity: 0.714

cgagcgccgacgggcgctggtggtcagcgcgctgc	CRISPR spacer
tcggcgccgacgggcgctgatggtaagccggcatg	Protospacer
. .****************.**** ***  **   

425. spacer 82.106|4304950|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 10, identity: 0.714

cgagcgccgacgggcgctggtggtcagcgcgctgc	CRISPR spacer
tcggcgccgacgggcgctgatggtaagccggcata	Protospacer
. .****************.**** ***  **   

426. spacer 82.131|4306762|34|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.706

agacgacaaccgcgccgcgcagcgcctggacgga	CRISPR spacer
actccgtggccgcgccgcgcagcacctgcacggt	Protospacer
*  * ....**************.**** **** 

427. spacer 98.2|5453194|34|NC_009767|CRT matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 10, identity: 0.706

tatctcgcaacgaggcgcgcggcgcgcggcgcgc	CRISPR spacer
ggctgggcgccgaggcccgcggcgcgctgcgcgc	Protospacer
 ...  **. ****** ********** ******

428. spacer 98.2|5453194|34|NC_009767|CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 10, identity: 0.706

tatctcgcaacgaggcgcgcggcgcgcggcgcgc	CRISPR spacer
gccctcgcaacgaagcgtgcggcgcgctccggct	Protospacer
  .**********.***.*********  **  .

429. spacer 21.7|1001496|49|NC_009767|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 11, identity: 0.776

atggtcgggcacctcgcgcctcgcgcctcgcgcctcgcgcctcttgcct-------	CRISPR spacer
-------cgcgcctcgcgcctcgcgcctcgcgcctcgcgcctcgcgcctcgcgcgg	Protospacer
        **.******************************** .****       

430. spacer 31.1|1645966|34|NC_009767|CRISPRCasFinder matches to NZ_CP031468 (Paraburkholderia caffeinilytica strain CF1 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.676

tacgaaaagaagaacatcaagtttgtcataatta	CRISPR spacer
agcgagaagaagaacttcaagtttgtgttcccgg	Protospacer
 .***.********* **********  *  . .

431. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

432. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

433. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

434. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

435. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

436. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

437. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

438. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

439. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

440. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

441. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

442. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

443. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

444. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

445. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

446. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

447. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

448. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

449. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

450. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

451. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

452. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

453. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

454. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

455. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

456. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

457. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

458. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

459. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

460. spacer 36.4|1975808|35|NC_009767|PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.686

cgccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
caatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
*. ..   *** ***** *************** .

461. spacer 36.50|1979181|37|NC_009767|PILER-CR matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 11, identity: 0.703

ttcgccgccgcgcgcctgaaccgtcacgcgccgttgc	CRISPR spacer
cccgtgtccgcgcgcctcgaccgtcacgcgccgaaat	Protospacer
..**.  ********** .**************  ..

462. spacer 36.69|1980571|37|NC_009767|PILER-CR matches to NZ_CP015738 (Shinella sp. HZN7 plasmid pShin-02, complete sequence) position: , mismatch: 11, identity: 0.703

tactactggctgctcgcgcgcgatccccccgcgcgca	CRISPR spacer
ggcgcctggctgcccgcgcgcgatcccgccgtcacct	Protospacer
 .*  ********.************* ***.   * 

463. spacer 36.91|1982181|37|NC_009767|PILER-CR matches to MT740745 (Ralstonia phage Raharianne, complete genome) position: , mismatch: 11, identity: 0.703

tcgatcacattgggcgcgccgagcgcggccagcgtcg	CRISPR spacer
accggggcattggccgcggcgagcgcggccagcaatg	Protospacer
 * .  .****** **** **************. .*

464. spacer 36.91|1982181|37|NC_009767|PILER-CR matches to MT740726 (Ralstonia phage Albius, complete genome) position: , mismatch: 11, identity: 0.703

tcgatcacattgggcgcgccgagcgcggccagcgtcg	CRISPR spacer
accggggcattggccgcggcgagcgcggccagcaatg	Protospacer
 * .  .****** **** **************. .*

465. spacer 36.91|1982181|37|NC_009767|PILER-CR matches to MT740743 (Ralstonia phage Hyacinthe, complete genome) position: , mismatch: 11, identity: 0.703

tcgatcacattgggcgcgccgagcgcggccagcgtcg	CRISPR spacer
accggggcattggtcgcggcgagcgcggccagcaatg	Protospacer
 * .  .****** **** **************. .*

466. spacer 36.105|1983203|37|NC_009767|PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.703

tgccctcg-------cgccgcccggcagccggatcgccccgacc	CRISPR spacer
-------gaggagatcgccgcccgccagccggaccgccccgccg	Protospacer
       *       ********* ********.******* * 

467. spacer 36.105|1983203|37|NC_009767|PILER-CR matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 11, identity: 0.703

tgccctcg-------cgccgcccggcagccggatcgccccgacc	CRISPR spacer
-------gaggagatcgccgcccgccagccggaccgccccgccg	Protospacer
       *       ********* ********.******* * 

468. spacer 36.110|1983572|36|NC_009767|PILER-CR matches to NC_014811 (Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence) position: , mismatch: 11, identity: 0.694

ttttaacgccagcatcgccaggctctcgaactcgtc	CRISPR spacer
ccgttgagccagcatcgccagaatctcgaactccgt	Protospacer
.. * . **************. **********  .

469. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

470. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

471. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

472. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

473. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

474. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

475. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

476. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

477. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

478. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

479. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

480. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

481. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

482. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

483. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

484. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

485. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

486. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

487. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

488. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

489. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

490. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

491. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

492. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

493. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

494. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

495. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

496. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

497. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

498. spacer 36.131|1975809|34|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gccatctacgccgtgcgcgggatgtgtgcgtgga	CRISPR spacer
aatggagacggcgtgcccgggatgtgtgcgtgcg	Protospacer
. ..   *** ***** *************** .

499. spacer 36.158|1977792|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 11, identity: 0.694

catccgaccatcgcccggcgcctttgcgcaaacgcc	CRISPR spacer
gcgccgagcctcgcccggcgcctttgcgcgtatcga	Protospacer
   **** * *******************. *.   

500. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcgtgttgtggccgatgccgacaccgatgatg	Protospacer
...  .  ***** *.******************.*

501. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcgtgttgtggccgatgccgacaccgatgatg	Protospacer
...  .  ***** *.******************.*

502. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
...  .  *****.*.******************.*

503. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
...  .  *****.*.******************.*

504. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
...  .  *****.*.******************.*

505. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcatgttgttgccgatgccgacaccgatgatg	Protospacer
...  .  *****.*.******************.*

506. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcatgttgttgccgatgccgacaccgatgatg	Protospacer
...  .  *****.*.******************.*

507. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcatgttgttgccgatgccgacaccgatgatg	Protospacer
...  .  *****.*.******************.*

508. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
...  .  *****.*.******************.*

509. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
...  .  *****.*.******************.*

510. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcatgttgttgccgatgccgacaccgatgatg	Protospacer
...  .  *****.*.******************.*

511. spacer 36.214|1981887|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.694

ctacgttggttgtcgtcgatgccgacaccgatgacg	CRISPR spacer
tcgatcgtgttgttgccgatgccgacaccgatgatg	Protospacer
...  .  *****.*.******************.*

512. spacer 36.232|1983204|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.694

gccctcgcgccgcccggcagccggatcgccccgacc	CRISPR spacer
aggagatcgccgcccgccagccggaccgccccgccg	Protospacer
.      ********* ********.******* * 

513. spacer 36.232|1983204|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 11, identity: 0.694

gccctcgcgccgcccggcagccggatcgccccgacc	CRISPR spacer
aggagatcgccgcccgccagccggaccgccccgccg	Protospacer
.      ********* ********.******* * 

514. spacer 36.232|1983204|36|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.694

gccctcgcgccgcccggcagccggatcgccccgacc	CRISPR spacer
aggacatcgccgcccgccagccggaccgccccgccg	Protospacer
.   .  ********* ********.******* * 

515. spacer 67.2|3447565|35|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020568 (Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.686

aaacacccggcgggcgaggtcgacctcgactacct	CRISPR spacer
gggactttggcgggcgaggtcgacctcgtcgactt	Protospacer
...  ...******************** * **.*

516. spacer 67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX443399 (Rhodococcus hoagii strain PAM1354 plasmid pVAPA1354, complete sequence) position: , mismatch: 11, identity: 0.711

gggaaggggtggcccgcgtcgagcaggccgccgaccag	CRISPR spacer
ccgacgtggtggcccgcgtcgagcaggccggtggtacc	Protospacer
  ** * *********************** .*..   

517. spacer 67.10|3448155|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX443400 (Rhodococcus hoagii strain PAM1557 plasmid pVAPN1557, complete sequence) position: , mismatch: 11, identity: 0.711

gggaaggggtggcccgcgtcgagcaggccgccgaccag	CRISPR spacer
ccgacgtggtggcccgcgtcgagcaggccggtggtacc	Protospacer
  ** * *********************** .*..   

518. spacer 67.18|3448743|37|NC_009767|CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 11, identity: 0.703

gatcatcgccgccgccatcgtcggcctcgagaagctc	CRISPR spacer
cgaggtcgccgccgccaatgtcggcctcgagatccag	Protospacer
 .  .************ .*************  *  

519. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011665 (Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence) position: , mismatch: 11, identity: 0.711

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
gcccaggtggcggcggtgcggtcggcggcgcggcgttg	Protospacer
 *   * .******** **** *************.  

520. spacer 67.79|3451516|36|NC_009767|PILER-CR matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.694

gcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
tgccgaggcgctggcgccgctgctcgccgcggcccg	Protospacer
   ********* **** ***********  ..*  

521. spacer 82.9|4297929|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.703

cgcgacggaccgcgcggcgcgcggcgaacacggcatc	CRISPR spacer
tgtgctccaccgcgcggcgcgcggcggacaccgccga	Protospacer
.*.* .  ******************.**** **   

522. spacer 82.44|4300465|35|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.686

gtgttcgacgccgcgcgcgggctgtcgggctttga	CRISPR spacer
ccatcgtccgccgcgcgcgggcggtggggcttttg	Protospacer
 ..*.   ************** ** ******* .

523. spacer 82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018851 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.1, complete sequence) position: , mismatch: 11, identity: 0.694

accaacgacgccgaagcgccggcggttatggtgcgc	CRISPR spacer
cttagcgaggccgacgcgccggcggttatggcagat	Protospacer
 ..*.*** ***** ****************.. ..

524. spacer 82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023286 (Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pCuR, complete sequence) position: , mismatch: 11, identity: 0.694

accaacgacgccgaagcgccggcggttatggtgcgc	CRISPR spacer
cttagcgaggccgacgcgccggcggttatggcagat	Protospacer
 ..*.*** ***** ****************.. ..

525. spacer 82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018859 (Xanthomonas citri pv. citri strain LH201 plasmid pLH201.1, complete sequence) position: , mismatch: 11, identity: 0.694

accaacgacgccgaagcgccggcggttatggtgcgc	CRISPR spacer
cttagcgaggccgacgcgccggcggttatggcagat	Protospacer
 ..*.*** ***** ****************.. ..

526. spacer 82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018848 (Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.1, complete sequence) position: , mismatch: 11, identity: 0.694

accaacgacgccgaagcgccggcggttatggtgcgc	CRISPR spacer
cttagcgaggccgacgcgccggcggttatggcagat	Protospacer
 ..*.*** ***** ****************.. ..

527. spacer 82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018855 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.1, complete sequence) position: , mismatch: 11, identity: 0.694

accaacgacgccgaagcgccggcggttatggtgcgc	CRISPR spacer
cttagcgaggccgacgcgccggcggttatggcagat	Protospacer
 ..*.*** ***** ****************.. ..

528. spacer 82.77|4302857|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018729 (Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.1, complete sequence) position: , mismatch: 11, identity: 0.694

accaacgacgccgaagcgccggcggttatggtgcgc	CRISPR spacer
cttagcgaggccgacgcgccggcggttatggcagat	Protospacer
 ..*.*** ***** ****************.. ..

529. spacer 98.2|5453194|34|NC_009767|CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 11, identity: 0.676

tatctcgcaacgaggcgcgcggcgcgcggcgcgc	CRISPR spacer
aggccgaaggcgaggcgggcggcgcgcgtcgcgc	Protospacer
 . *. . ..******* ********** *****

530. spacer 12.1|708293|34|NC_009767|CRT matches to NZ_CP031094 (Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence) position: , mismatch: 12, identity: 0.647

-------ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
tcccagtagccaagaggcaagaggcaagaggcaa-------	Protospacer
       .*. .*************.********       

531. spacer 12.3|708434|34|NC_009767|CRT matches to NZ_CP031094 (Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence) position: , mismatch: 12, identity: 0.647

-------ggtggagaggcaagaggcgagaggcaagaggcgg	CRISPR spacer
tcccagtagccaagaggcaagaggcaagaggcaa-------	Protospacer
       .*. .*************.********       

532. spacer 36.31|1977791|37|NC_009767|PILER-CR matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 12, identity: 0.676

acatccgaccatcgcccggcgcctttgcgcaaacgcc	CRISPR spacer
ggcgccgagcctcgcccggcgcctttgcgcgtatcga	Protospacer
.   **** * *******************. *.   

533. spacer 36.105|1983203|37|NC_009767|PILER-CR matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 12, identity: 0.676

tgccctcgcgccgcccggcagccggatcgccccgacc	CRISPR spacer
gaggacatcgccgcccgccagccggaccgccccgccg	Protospacer
 .   .  ********* ********.******* * 

534. spacer 36.212|1981742|35|NC_009767|CRISPRCasFinder,CRT matches to MH271312 (Microbacterium phage RobsFeet, complete genome) position: , mismatch: 12, identity: 0.657

tcgggcgcgccatcgccgccgcgcgcgaggcgcgg	CRISPR spacer
agaaccgcgtcatcgccgccgcccgcgaggtcacc	Protospacer
  .. ****.************ *******.    

535. spacer 67.46|3450835|38|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041158 (Leisingera aquaemixtae strain R2C4 plasmid unnamed4, complete sequence) position: , mismatch: 12, identity: 0.684

tcggcgccggcggcggggcgggcggcggcgcggcgcgt	CRISPR spacer
aaggcgcgggcgccggggcgggcggcggcatcaaaccg	Protospacer
  ***** **** ****************.. . .*  

536. spacer 67.55|3451508|37|NC_009767|CRISPRCasFinder,CRT matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.676

ggcgcgaggcgcttgcgcggctgctcgccggcatcgc	CRISPR spacer
atgccgaggcgctggcgccgctgctcgccgcggcccg	Protospacer
.   ********* **** ***********  ..*  

537. spacer 82.9|4297929|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 12, identity: 0.676

cgcgacggaccgcgcggcgcgcggcgaacacggcatc	CRISPR spacer
tgaagtcatacgcgcggcgcgtcgcgaacacggcata	Protospacer
.* ... .  ***********. ************* 

538. spacer 82.36|4299884|36|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 12, identity: 0.667

cttttgcggcgcgccagcgcacccagtcgccgaacg	CRISPR spacer
tgccgtcggcgcgccagcgcgcccggtcgccggtac	Protospacer
. ..  **************.***.*******.   

539. spacer 82.125|4306327|37|NC_009767|PILER-CR,CRISPRCasFinder,CRT matches to NC_020308 (Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 plasmid pCFSAN001992_2, complete sequence) position: , mismatch: 12, identity: 0.676

atgaactcacccgcaccggacacccaatcgcggagcc	CRISPR spacer
ccgaactcaccggcaccggacactcaatgttgacagt	Protospacer
 .********* ***********.****  .*. . .

540. spacer 82.173|4309802|37|NC_009767|CRISPRCasFinder,CRT,PILER-CR matches to NC_020308 (Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 plasmid pCFSAN001992_2, complete sequence) position: , mismatch: 12, identity: 0.676

atgaactcacccgcaccggacacccaatcgcggagcc	CRISPR spacer
ccgaactcaccggcaccggacactcaatgttgacagt	Protospacer
 .********* ***********.****  .*. . .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	3648895 : 3720111	57	Vibrio_phage(14.29%)	transposase,tail,plate	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_009767|3648895:3720111|DBSCAN-SWA
TTCATTGCCGGATATCCAGAATGTAGCCAGCGTGCGCCGGTTTATGCGCGCGCACCAGATTGTCGATCAGGCGCGCATCTACATCGCTGCCGGGCGGAAGAGCGAGCGAAATGCGAAAGACGAACGGTTGCGATGGTTCTTCCGTAATAGTTGGCGTCAGACCGGTCACCACCTCGATCAGTCGCTTGAGTCCATACGCCGTGCCGCGCCAGCGATAGAGATCGGCGGCTTCGGCGATCAGGCGACGGATGCGCGATTCGGGCCAGTATGGATTGACTTCCATATCGAGCCAGCCTGCCAGCCAGGGCAGAAACGACAGCGGACAGGTGCGCGGGTCGAAGTAGAGATTGATATGATTCTGACGCCATTCCAGCGGCTCCCAGATCGTCTCGAAAATCCGCAGATAACGCCCCAGAAACTCATTCTCCTGAAAGATCGCCGGCAGATAGCGCAGGTAGCGACTATCCAGTCCATCCGACGACGCGGCATAGCGCACCGGCAAGCGTTCGGGAAACTCCTGGGCAACAACGACCGGCTCTTCAGGCGGCGGTGGAGACGGGGGTGCGGAAGGCGCTTCAGGTGTCGCCATCGCAGCAGATTCGCCAACCGCTCCTTCCGTTGTCTCACCGGAGATTGCTGCCGTGAGCGGCTCTTCTTCGATAACCGAAGGCGGTTCGGGCATTTCCGCAACCGGCAGCGCCACCTCTTCGGGCGGATACACCACGCCAGGCGGGATATAGATCAGAATGAACGGACCGATCCGCACCTCCTCGCCGGGGACCAGCGGATAGGGCTGATTTGGCGGAAGGCGGCGCTCGCCAATGAAGGTTCCATTCGTGCTGCCGAGATCGACCAGTTGTGCACCCTGCGGTCCCGCGTCGATCCGACCGTGCATATTCGACACGACCGGCGAGTCGAGGTGCAGATCGCGCGCCGGGTTGCGCCCAATGGTGTACTGCGGCTGGCGCAAGGTCACCACCTGTTCGCCGTCGGGGGAGCGAATGATCAGTTTGCCAAAATCGGGTTCCACATGCTGCTCCGGGTAATACCAATTCCCTGTGACCATCCGGCATGGTCACCCCGAGCAGAGCGAGGGGTCTTGCGCGACCCGCTCCGATTCCTCGCTGAGTTTACCCTGAGCGAAGCGAAGGGCTCGGAATGACACGCATGCGGCATCTTCAATCGTCATTGGTATAATGCGTGAAGATCACCTGTTTACGACGCACTGACCGACACTCGATGCTGCCAGGAACAGATCAAGGCGTGGCGCGGCACATCGAGGCGCGGCGAGACGACCTGTGGCTTTGCCGTGCTCCCCGGCTCGGTCAACCCGATCTGCACTTCCTCGACGAACTCAATTGACGGGAGACGCTGCATCAACGCATAAATCTCCGACACATGCAGATCACGACCAAAGGGCCAACCGTTGCCGTCGGGTCCACCGACATATGGGTTGAGATACCGATAGAGCACCTCTTCTGCTTCGTGCTGCACCGCGCGCGCGAGTGCCGGATCACTGCGCACCGGAACACGCAGCCGCACCTCGACCGACACCCAGAGGTACTGGATCGGGCGCACATCGAGTGCAATGCCCAACGGACGCCGCCGATCCAGATAGTCGAGCACACGAGCGCGCAGTTCGGCGGAGAGCGTCAGCGCCTCCGGCGGAATCCGACCGGCAGGATTATCGGACTGCGGCAGAATGTAGACTATCACCTGACCGGGGCGCGGATCCGCCGGACCTCCGGGCTGCGCACCGGGACTGACGCAGCACGCGCGCGCCACGCCGACCACCTCCCGCGCCAGGTGCTCATAGTCATCAGCGGTCACGGCGCGGGTACGGGTACGCAGAATCTGCGGTGCACGGGCGCGCGCATCATCGAGACCCTGCGGATCGCGTCCGCCCTCGGCAGCGCGGCGGTTCGTCACCCGCGACACATACGGGATCGATGTCTTCAGCGTCACCAGCGTATTCGCCTGAACATTGCCGATCACGCCGCCGCCGTACTGATAGCGCGTCATCGTAATCACGCTCCCGTGGGGCGGCACACTGCCAAAATTGCGCACCGATCCATCGGGTTGGAGCAGTGCCGGTCCGAAACTCACCGTCCCGCTCAGGCTATCGAGCGTATAGTGCTGATCATCAGGACCAGAGGCGGCAAAGTCGGGAACCTCGCTCCACTCGCGCGGACGACCGGGGAGTGGCGGATCGACGATCAGGACATCGCGCTGTGGATTGCGCGCCAGCACCGGTTTGTTCAGCAGATGAAACTCCTGACCGGGCGTGCCGTCGCTGCGCCCGATGACCTCGTTGCGCACCGTGACCGCATGGCGGGCATTGACCGTCCCGCCGCGCGATTCGATCCGCAACGCCAGCAATTCGGGCGAAACTTTGTAGCGGTTGTGACGATTCTCCGGCGTATCCGCCTGCGCGTCGGTCAGGCGGCAACGAAGCCAGTGCGCCGTCACCCCCTGGATCGTATCGGGCGCCATTGGCGGCAGGTGCAGCACAATTTCGCCGGGCATATTGAAGCCGCCGGTGCCGTCGAACTCGACCTCGCACGGCGACCAGCGCGCCACGCCCCCCTGCCACACTTCCCAGATCAGCGGTGGATTGGTCGGATCGACACCGGCGCCGCGCGCCACATCGCAGTCGATCACCAGCGCCAGGACGTGATTGCTGTGGTTGTGCCGGAGTGGAATGTAGAAAGCGTCGTGCGGCAGCGGATTGGGCGCAAACATGGCAATCCGTCCATTGGGCAGCAACAACTGGCGCAACTCATGCATGCGCCAGCTTGCCGGAACATTCGGGCGTTCCACCTGGCGAACATACACTTTCTCATCAGCCACGACCGCCGGATATATCGTCAGATCGGTCTCGGTGGTGAAAATGACCGCCGGACTGGTTTCGGTGCGCACCGTCGCCACTTCCGTGTCGGCAGGGATCGTGATTGCCGTTTCCTGCGGCGCCGACAGATAGAACGTCACCGGCGCAACCGCCGATTGCGGCGGCTCCAATCGGATGCCGATCAGATTGAGCAGCGTGATATATACCTTATCGGGCACCTGATTCACCCGATAGAGCAACAGATCGGTCATCCAGGCGAACAACTCGATCAGCGCCACACCCGGATCGCTCACGTTGTGATCGGTCCACTCCGGGCAGAAGCGCGGAATAAGACGTTTGGCTTCATCGACGATGTCCTGAAAGTGACGGTCGTCGAGATTGGGTGTTGGCAGCGGCATGCAACCCTCGTCTATTCACCCGGAATGCGGTAAAACGGAAAGACCAGCGAGCGGCGATCATGGGTCGCCTTGATGCGATACTCAATCGTGATCAGCATCCGTTCCGGCGTCTGCGGATCGGTATCGATCTCGACATTCAACACATCGATGCGCGGCTCCCACATCGCCAGCGCCTCTTCGACATAGTACACGGCAAGACCGGCCGTTGCGGCGTCGTTCGGCGCAAAAATGAGATCGTGGATCTGGCAGCCGAACGTTGGGCGCATCAACCGCTGACCTTTCGGCGTCAACAAGATCATGATGATCGCCTGCTCAATATCGACCTCCTGGCGCGCCAGCGCAAAGCGACCGCGCGCGTCCAGCCCGACCGGAAACGCCCATCCGACGCCAAGAAAATCGCTCATCGCACCTCACCCGCCAATGTCAACCTGTGGAAATCCCCCGACAATCACGCCGCCATGCGCCGTCTGATCACCCATGCGCGCCGCCGGCATGCCGCCGATCAGCACCGTTGCGCTGCCTTTGATAATCGTATCCGGCGGACCGGCGCACGTCGCCATACCGCCGACCACCGCCGCCGGCAACCCGCCGATCAGCACCGTCGGCACGCCAGGCGGCATGATCGGACCACCAACATGCGGCTTTGGACCATCGGACAGCGGGCAGGTATGCATATCGCTCACGCGCGCGGCAGGAGGCATCGCATTCTTCCTTTCAGTTGATTTTGACCAGCGTTCCCTGGATCGTCAGAATCGCCGACGATTTCACATCGAGCGTCGCATTCGCCTGCAAGGAGGCCGTAGCATTGGATTTCAGATCGAGGCTGGCATTCGCCTGCAAGGAGGCATTTGCATTCGACTTCAGATCGAGACCGGTGGCGCCTTCGATAGCCATTGCCTGCTGCGATTTGATGTCAATCTTGCCCTTTGCCTGGATCGTCAGGTTGCCATCGGCGCTGATCGTGCCATTCCCTTTGACTTTGATCGTCAACTCGTTCTTCTTGCTGTCGAGTTTGATCATATTGCCACTCTTGTCTTCGATGGTAATCGACGGCGCACTATCGCTATCATCCAGTGTAATCACATGACCGGAGCGCGATTTGACCACACGTTGCTCAACTTTCCCGCCTTTGACGATCTCGCCGGTCTTCTTCGGCGGAGCATCCTTGCCGTTCCACAAACCACCGATCACATACACGGCGCGCATATCGCCAGCCTCGAATCCCACCAGCACTTCATCGTTCACTTCCGGCAGAAACTCGATCCCACGGTTGGCGCCTGCGCCGACACTGACCACTCGCGCCCAATGGCTCTGTTGATCCGAAAGCGTCGGAAACTTCACCTTGACACGCCCCAGGTTGTCCGGATCATTGTTGTCGGTCACAATCCCGATAACCAGTCCTTCAATCCTCAGGCGTGGCGTTTCCGGTTGCAGCAGGTGCAGCAGAGCATCCGGGTTGACCCCCGACACCGAAAAGTCGGTGACATAACCAGCAGCGTTATAGCGATGCGTCGCGCTGGTGACAACATAGGCGCCGCTGAAGCGAATGCCAATGTTGGTTATTTTGACCGCTGCTCCCGCCTTGATCTTCGGGTTGCCGGCAGCCGTGCCATCCGCTTCGATACACCGGCTTTCATGCTGATTGAGCACCGCTTTTGCGATCTGTTCCGCTTCCGATTGCGAGCGCACGGCGGACTCGGTCAGCAAATCTTTCGCCGTGATGCTGAACGCTTTCTTCGCCAGCGCGCCGCCTTTGTCGGGGACGCCAATCGCAGGCGTCACCGCGCCAGTCGTTCCCTGACCGATCACCACTTCTTTTTTTTGTGGGTCCCAACCGCGCACATTCACCTCATTCACCTGATCGATCGTGCTCAAGCGCGGGTGAAAGGCGCTCAGATCCTCACCCCATTTCAACTCGACCGGTGCTCTGGCGGAAGGGGGCTTGACACAGAAGAGTTTCCGTCCATCGACATACAACAGATAGCCGAGCGCCGCCGCCCGTTCGCGCAGAAATTCCAGGTTTGTCTGGTTCCACTGCACAAGATACTCGTGAACCCGGCTCGTCGCATCCACCTGCGCCTGCAACCCCACTTCACCGGCAATCTGTTGGATCACGTCGCTATCGGTCACATTCAGAAAGGTGCGGGCGTAACGACCGCGCGCCAGGCGGTGAAGACGATCAAAGGCGCGAACCACAACCCGCGCTCCTTCTACATCGAAGTGCGGTTCAACTTCGACAATCTCGCCATCGAAGATCGTCTCGGTTGCGCGATTGCGCCGGACATTCACCACAAGCGTCTTGCCCGGCGCCAGGCGGCTGTCATCAACCCACGTCAAACGGCGGTCGTTGATGACGAGCGTAGCGACATCCGGCAGGTGCAGACTGTTCTCGATCGTGATGTCCAGGATGTCCCGCACCAGTTCCAGCGGCGCGTCGGCGCCGTCGAGTTTCAGGTAAAAATCGGAAACATGCCGATCATTGTTATTGTTACTCATTGGGGATCACCAGCACTGCTCCTGGCGTCAACTCGCGCACCCGTTCCAGACCGTTCGCTTCGGCGATCGGGCGCCAGCGCGTCGCATCGCCATACGATTTATATGCAATCCATGCCAGTGTGTCGCCTTCACGCACCCGCCAGACCCGCTCACCGCCAATGCCGCCAGACGTCGGGTTCTGCGGTTGCAGATTGGCGGTGTCTTCAATCTGCTGAAATGTTACGTCAAGTTCAGCGCGCACCGGTGTTCCATCGACGAGAAACAACGTGAACTTCTGGGTGATGTTGGTGATGACCGCTTTGAACGACCAGGAGGCGCCCCACTGAAAGCGCACTTTCGGCGGGCGTCCGCGGGTGCTCTTGGGGTCTTTCAAGTCCGGGTCGATCATCATAAACGACCAGAGTTTGTCGGTGTACACTTTGCGCACATCCTTCGGTTTCGATCCGGGGCGCGCACTTGTGTAGGTGTCGAACAGCAGGTGCATCGACAGGGTTGCCGGTTGCCCGCCGCTGAATTCGAGTTGTGGCACGTTGGTGCTGGGTGTTTCGCCGCGGCTCCAGCTATTCTGCTTGGTGAAGGTGTACTCCTTCGGGTTGAACAGACACTCGACCTCTTGTGAGGGGTTGTCAAGGTTGATGATTTTGGCTTTGACCAGGCTTGTATCGGGCATGCAACTCCTCCTGTCTACCAACCGCTGCGCCGTCGCTCGACCGCCAACCGGCGTTTCAGCACTGCATAAACCTGGCGTGCAAGTTCATCGAGGTCGGGCGCAGGAGATGCTTCCTGCGCAGGCGCAGTCGTTTCCGCTCGCCGGATGGCAGGTAATGCGCGCGTGGTTTCTGCGGTGCGCACAATCGGCGCTCCCGCCTGCTGCGGCGCCGTCAACGCCGGCGGCGCGGGCGCGACCGTCACCACCGGCAACGGCGGCGCTTCCACTGCCGGTCGAGGAGGCGCCAGCCAGTCGGGTAGCGGCTCCCAGGGCGCGGGCAGGTTGCCCCACCGCGCCCGTTCCGGCGCGTCTGGCGCATCTGCGCTCGATGGCGCAGGGTGAACCTGTTCCGACGCCTGCACCGGAGGCGCTGTCGAAGCGCCGGTGTGCGCAGGCATGACCGGCGGAGCAAAGCGCATCCGCGCAGCCTGAGTCATCTGCGCCTCAACCGTTCGCGCCAGCGCCTCCTCATCGGTCGACGGTCCCGGAGGCGCCGGGCGTAGACCGGGGCGCTGCTCAGGCGGACGCACAATCGGCGGGATGGCGGTCGGGTCGCGTCGGCGCGCCACGTGAGTCAGTTCGTGCGCCAGCAAACCGAGACCTTCAGCAGTTTCGTCACCCCTGGCGGGCGCCAGCGCCACATCATTGCCAAACGTCACGGCATCGGCGCGGTATGCTGCCGCCACACGAGCGGCTTCCGGTCCGCGCGCAACACGCACGGTTGCGGGGTCCACCCCGACAGCAGCGCGCAGAAAGCGCCGATTCGACTCAGAGAGCGATGGCGCGGAAGGGGCGGAGAACCGCGCGCTGCTCAACGCGGTGGAGCGAGCGGGAGCGCTCACCGGCGGCGCGAAACGTGTCGCGCGTCCTGACAGTGCCGTGCCTCCCGGCAGAGGCGCGCGAATCGGTTGTGGCACGGGACGTCGCGGTTCACTGCCCGATGCTGTCTCGGTCGCACTACTCGACCGGATTGCACCGACTGGTTGCACCGACGCCAGAGGAGGCGCATCAACCGATCGCGGATCTTCGGCAACGCCCCCCGGCGCCTGTGCCGCTGCGTCTTTCTGGCGGCGGCGGATCTCATCGGCGCGCAGGCGCTCCATCCAGGCTTCCACCGAACGGTCGAAGGCTGGCGTCTCCACAGGCGGTTGATCCATCGCTTGAGGCGTCTCTGCCACCGGGGCAGGGTCAGGCGGCGCAGGGCGCGGCGCGCGTTCTTCAACAAAGCGCGGCGGGCGGGCGACCCGCATTTCAATCGGCGCCTGCGATTGTGGCTGGGATTTCGGCGCAGCAGGAGGAGGTGGAGCAGGCTGCTGCGGTGTTGATGCCGCAGCACACTCCTGCATTCGTTGCGCTACCCAGGCGCGCGCTGCGTCTACAACGGCAGCGGCGGGATCGGCGGGCTGTGGGGCGTCACCCGCTTTGGACGGAGCAATAGACGATGCGGCGCTCACGGAAGGCGGTGCTACTGTTGGCGTTGGAGTGACCGATGGCGCAGCGCCTGCGTTGGGAGCGGCAACCGATGAAGCTTGTCTTGCCGGAGACACGTTCGCCTTCGTCGCCGCCGACCACGCTTCGGGTTGCGCGGGAGACGGCGCAGCGCTCACTTCCGTGAGTATCGTCGTCGTGACCACATCGGCGCCGCGGGAAGCGAGCGATGACGTATCTTCGGATGCAGCAGAGACGTCTGGACCTTCGGATGTCCCTCTGGATGCTGGCAGTCCTGGAGCGAACACCCCAGGAGGCTCAGGCGCAGGGTCAGGAGCGGGTACAATCGGAGGTGTCGGCGTCGTTTCACCGGCAGACGCCGACACTGCCTGGTCACGACGCCGTTGCTCATCGGTGCGCAGGCGTTCCATCCAGGCAGCGGGAGAACGATCGAATGCTGCGACAGGTTCCGGCGACGCGGATGGAACGGCGGGCGTGGACTCCTGAAGCGGTGTTTGGCGGGCAACCGGCGCCTTGCCTCCCTGATCCTCAACCGGCGCTGGCGGCGCCGACACTGCGGCGGCGGCGTTATCAGCAGGTTCTGGCGGCGCGACCGGTGCAATACCGCTGCCGTCCTCGACCGGCTCAGGCAGCGCTGCTGTTTCCCGACGAGCACGCCGGTGCTCATCGGTGCGCAGGCGTTCCATCCAGGCAGCGGGAGAACGATCGAATGCTGCGACAGGTTCCGGCGACGCAGATAGAAGAGCGGACGGAGATTCTCGCGTCGATGTTCGAGGCTCTGGCTGTGCGCTAACCGGCGCACTGTCCACAGGAACCGGCATGGCGCGTGTGTTGACGTCATCAGGCGCGTGGCTTGCTCCAGACACAACGGGAAGCGATGATGGCGGCAGCGTTGTATCTGGCGTCACCGGTTCGGCAGGAGACGCGACCGTCCCGCCACCGGCGACCGGCTCTGGCGATGCGGGCGCTTCTGGCGCGTCCCCACGCGCAACCGGCGTCGGCGCGACCATGCCCGCCCCAGGTTCGCGCCCACCGGCGACCGGCTCTGGCGATGCGGGCGCTTCTGGCGCGCCCCCACGCGCAACCGGCGTCGGCGCGACCATGCCCGCCCCAGGTTCGCGCCCACCGGCGAGCGGAACAGACATCGGCGACAAGTCCCACAGCCACACCGCCGCGCGCGCTCGCCGGGGAGTCATCGGCGCTTGCCCGATTGCCCACAGAATCGGTTGGTCTACCGCCGCGCGCGACGCGAGCGGCGCCCGTCCGGCGAGCGCGCGCGCAAGGCGCATATGGCGGCGTAGACGCATTATCAACATCCGATGGATCATCGCATTACCCGACCGTCATTCCATTGTGCGTCAGTTCGAGCGTTTCCACCGCCGCTTCTGTCGAGGCGGCAGTAAATTGCGGACCGGTCCATTTGATCGGATACGCCTCGATGAAGTTCCAGCGAAACAATTCCTTCCCTGCCGAGTCGTACATGATGACCGTCACATTCCGCCGATCAATCGAGCCACGCGCAATCTTGAGAAACCACTGCAACAGTTCATTCGAACTGGTCATGCCGCGCTTGAGGGTGATATTGCCAATCTTCGTGCGACCCGGCAAACGGTGAACAAAGTCGTTGTTGCCACCCTCTTCGTATTCTGTGATCTCGGTTTCGACCTGCAAACCGCTGACTTCGGTGAACACCGCATGCGGCACGCCAGCAATCTCGACATAGAATCGGTAGGAAGGATACGCTTCTTCCGTCGTCGGCATGGATCACCTCTTCCGTCGTTGCCTGCCGACACTCACGCCTCTGGCGCGTTCCAGGCGCGCTTCCTCGCGCATGAGGCGGTACACCCGGTCGGCGAGCGCCTCGATGTCGATTCTGGTATCGTGTTGGTCGGATCGCTCCTGTGATGGTGAGCGATCCGGCATCTCATCAGAATGCCGGGATGTTGGTTGAGGCATCAACGTCATCCTGTCTTCTCGTGGACCCCGACATCGATAGCAAACCGCGCGCCGCATGCGGGGCATTGTGTTTCGACCAGGTGCGGAGCGGCGGCGTTGATCTGGATGTACAGGTCCTGCAAATAGAGAAAATCGGTCGCAAACAGGCGCTCCACGATGGCTGGCGTGATGACGCCGATTGTGCCGAGGCGGGTGATCACCCGGCTCAGCAGCAGAATGCTGAGATACGCCTCGTTGCGCTGCACCCGCGAATCTTCGAGCGGTTCGATCTCGTCGATTGCTGTTGCACGACGCATCGATCCTTCGCGGTGCAGGTTTCCCTGCTCATCGACGTAGCCGCAGGGCAGCACAAATGAGAATTCAGTTTGTAGCATGGTGTCATTCCAGCCAGGCGCGACGCCGGTTCTGACGCCGGTTCTGACGCCGGTCCTGACGCCGGTCTGAGACCGGCGTCTACGGTGACCGCCCCCAACGCCGATTCGACGCCGGTCCTGACGCCGGTTCTGACGCCGGTCTGAGACCGGCGTCTACGGTGACCGCCCCCAACGCCGATTCGACGCCGGTCCTGACGCCGGTCTGAGACCGGGTTGCCGACGCCGGTCTGAGACCGGCGTCTACGGTGACCGCCCCCCAAACGCCGATTCGACGCCGGTTCTGACGCCGGTTCTGACGCCGGTCTGAGACCGGCGTCTACGGTGACCGCCCCCAACGCCGATTCAACGCCGGTTCTGACGCCGGTCTGAGACCGGGTTGCCGACGCCGGTCTGAGACCGGCGTCTACTGGACGCGCTCGTATCCTTCGTGGACGATTTCGAGCGTTTCAATCGCCACTTCGTTGTTGGTTGCGTTGGCGTCCGGTCCGGTTAACTTGCTGGGCCATGCGTTGACGAATTTCCAGCGCGCGACCGGTTCGCCTTTGGTGTTGAACATGGTAATCGTGCCGTTGCGCCGCGCTCCCTGAATATCTCCCTCTTCGACCATCTTGCGCCATTTCCACATGTCCATGGCGTCGGTGATGCCGCGTTTGAGAGTGACGTTGTTCCATTTCATGCGACCGGGGATTTTCTTGATGATGTACTTCCCGTCGGGTCCGCTGGCTTTGCTCTCGACCACTTCGTTCTCGCTGCCGAGACCGGTACATTCGCGGAAGGCGCCCACGACGCCGTCACCGAAATCAACGCCGAACCATGCTGAAATCAGAGGGTCTTTGTCGGTCATTGGTTTCTCCTTTTATGCTTATGCCCCGCCGCCAGCGAACTGGCTGAAGCGGAAGATGACGAACTCGGCGGGTTTGACTGGCGCCAGCCCGACTTCGATGATCAGTTTGCCCTGATCGCGCACTTCGGGCGGGTTCAGTTCTTCGTCACACTTGACATAGAACGCCTCGCGCGGTGTCAGACCAAACAGCATGCCATCACGCCAGCAGACGGTCAGGAACGCTTCCACGTCACGCTTGACGCGCGCCCACAGGTTGGGGTCGTTCGGCTCGAAGACAACCCACTGCGTCCCGCGTTCGATTGACTTCTCGACGTAGTTGAAAAGACGCCGCACATTGACGTAGCGCCAGGCGGCATCGCTGGAGAGGGTGCGTGCACCCCAGACCCGCAACCCCATACCGGTGAACGACCGGATGCAGTTGACCCCAATCGGGTTGAGCACATCCTGCTCGCCTTTCGTGATCGCAATCGCCGGTCCAAGCGCACCCTGAACAACCTCGTTCGCCGGCGCTTTGTGGACGCCGCGCGTATTGTCGTTGCGCGCCCAGATGCCCGCAATGTGTCCGCACGGCGGAATCTCCATCTCCGTCTTGCCGTCCGGTCCCATGATTTTGAGCCAGGGGTAGTAGAGCACGGCAAACTTCGAGTCGTAGTTCGTGTCGCGCTCGCGCCACTGCTTGACCTGCTGCGGCGTCAGACCAGGAAGCGGATCGAGAATGACCATGCGATCCTGCATGCGTTCGGCGTGGGCAATCATCGCCAGTTGGACAGCTTTGACTCCTTCTTTCGTGATTGCGCCCGACTGATAGGCTGCCATCAGGTCTGGCGCGCAGATCATGGTCACATCCTCGGCGATCTCCAATCCCTCGACACCGCTGCGCTCGGCGGCGCTACCGACGAATGTCGTCGCATCCACGCGCGCCGGAACGATCGGCGCCAGCGGCTTGATGACCGACATGCCAAACTCCGGCACACGGTCCGCCAGCGAGCCGGTCGCCGGTCCTTCAGCGACCTGCACCAGCGTGCTGGAACTGTTGATCTTCTCGACCACGTAAGAGGTTCCATCTTTTGGTCGTTTGTTGAACGACACATTCTCGTAGACTTCCTTCACTTCCCCCATGCTGATTTTGACCGTAAACGCTTCGGGAGGCGGATTTTCGCCAACCGGCGGACCGATCTCCACTTGAATGTCGCTGGCAGTTTCGCTCTTGGGTGTGACAATCAGCGAGGTCAGCGCCTTCGAGGCCCGCGTCGGGAGTTCGAGGCGCGGCGGAGGAGGCGCTTTGCCGTCCGCCTGCTGCGGGATGCGCGTCACATAGCACCGACCGCCGCCGTTGAGAAAGTAGCCGTAGACGGCATGCGACAGATAGGCGCCATCCATGTGTGGGTTGCGCCGCCCGCTTTCATCGAGACGACCAAACTTCTCGACATACTGCGTCCAACTGGTCACCAGCACAGGTTGATTAACGGGACCGGCAGCGGCGAACCCGACGAACGCCGCCATTGCCGTGCCAACCCCCTCAATCGGACGCGGACCGCTGCTGACTTCTTCGATGTAGACGCCAGGCGAGAGATACTCAGGCATGAACCGCTCCTTTCAATCCAGCAAGATGTCGTATGAGTCCGACGGTGTTGCGAATGTTGCGATGTGGACGCTCCCATCAGGGCGTGTTACCCGCAGGGTCACTTCCCCCAGCGGGATGTGACTCAGCGCATATCTGCCTTCGCTATCCGTAACCGTTTCGATTGCACCTCCTTCGATGGCAACCGTCACTCCCGAGAGCGGCGCGCCGGCATGATCACGCACGGTTCCGCCAATCCGAAGCAACTCCGTGGACGCGGCGGCATCGGTTCGCTGCCGGACGCGCAGCGTTCGCGTCAGCACCAGCGGTGAATCGATGACGATGTCAAGATCGACCGGAACCGTCACCACGTAGAGCAATGAGGCGCGCGGCGCCTGTTCGAGCGCATTCCACACATCGAGCAGACGCAGACTCTCCTCGGCAGTGGCGATTTTGGTTGTCACCTGCGGTTCATCAACCAGCGCCATCATTGCCGCACGCGCCGCCGAACCGATTTCAGCAGATGCGAGGGCGCTGCGCAGGTCGCGCAGCGTGGTGCGTTCGCCAGCCCCGGCAAGCGCCATGAACCGCGCTTCTTCTGCAACGTATCCCTCGCGTCCTGCAATGACCGCCATGGCTGCCGCCAGCGACGATGGCGGCAACGACGGAAAACGCAGCAGAGTGGCGAGCACGCGATAGATCAGCAGATGCTCATCCGCAGCGACCGTGGCGAACACCGTCACCATGTAGCGCAGATCGAAGCGGCGCATCGGCATACGGTACGATGCACTGCCGCCGCCGCGCATCACCGGCATGTTCGTCTGGCGCAGATCGACGTTTTCGTCGATATCGAACAAGTACAGGTTGATCGTCGGGCGCACCAGTGAACTGACCCACTCCTTCGTCGGGCGCTCGAAACGCACGTCTACTTCATCCGCCGGGATCAAGCCCCGGTTCAGAATCATGTGACGAATGGCAAGATGGACATCTGCGATCATGGTTGGTCACTTGTGCGATGCCGCAGCGCCTGCGCGCGAAACACGATCAGATTGCGCACCTGAATAAGCCAGCGCACGAAATTGCGGTAATCGTCCTCATCACGGCAAGCGGCGATCCCTGCGCGCACGATGCGCGCAATCTGCGGGAAACCGCGCTTTTCCAACTCTTCGACCAGTTCCTCAGGCATGGCGCCGGCGCGTTCCAGGCTGATTTCGTTGGCGGTCGTCAGCATACGATTGAACATCGGCAGCGGCACTCCCGCCTCTTCGACCTGCATCGCCATTGCTGCACTTCCGATCCCCTGCAACGCCAGTGGCAATCGTCCTTCTTCGTCGCGCAATCCTTCAGCAAACAGTTCCGTCAGATCGAGCGCGAGTTGCTCCTGGCGCGTATAATCGCGGTGCGGATTGATCGGCATAATTGCCCCTCTCTTCAGCATGCCTACGGCGTTGCGGGTTGCGGCTGCGCTGTTGGCACAGCCGATGGCACATCGATAGCGGTCAGCATCGTATGCCCGCTCGGCAGGTTCAGCGTGCTGGCTTTGAAATCCTGCTCGGTGCGCCAGACGGTGTCGCCGGTGGCAACGTCGTGGATCTGGATACGGTTGCCGCTGATGGCCATCGCCATCACATAGTGCGCTGTATCACCGACGCTGCCGCCAACAACGATCGGCACGAAGATACCAGCCGCCAGGTTGGTTCTCAGCACGTCGAGCGCCGCGTCAAGCGTCATCTGCGTGCCGACGATCTGCGTCTGATAGGTTACGCCGGTTGCGCCAGAGAGCGCATTCATTTCCGCCTCGACCCACGCGCCGCCTGTCGGCTGGGTGCGATCGGTCGCCGGATTACCGGTTCCCGCAGCGGCATGGGTGTCGAGGATCGCCTTTTGCTCACCGGCAAGCATCTGATTGGGAATCGTGTCCGGCGCGCTGACGGCATGTTCCGACGCCTGTTCGATCGGCCCGGCGGAGCGCAACGCCAGAGCATAGATCGGGTCGGCTGAGGCGCGGATGACTTGCACCGACGTGGGACCGCAACTGTTGCCATATTGCTGAATAATGCCGCGCTCGACGCCGTCCGCTTCGTTCAGGTCTACCACATTCAGGTTGCGCAACAACCAGTTGTCGCTCAGTCCGCGGATCGTGGCGGCAAAGTCGGCGATGTCGCTCAGTGAGCGACTGGCTGCCAGCGCCTTGCACAGAAAGGCGCGTTCCATACTGGAACCCGCACTCTGCAACAAGGCGCGGAAGGCGGTGTACTCATCGTCGGAAAGCGCCATGACTGCTGGTTCGATCCGCGATGCCTGGTGTGCTGTCAGCACGCCGGGCTGGATATGCGCAGCAACCATTAAACGGTCTTCATTCGTCCAGCGCTCGACCGGCTGCGGCTGCGGTCCTGGAGGTTGTGGTTGCGGTCCCGGCGGCTGCGGTCCTGGCGCTCCCGACTCCAGCGCCCCCCAGGTCAACGGTCCAATAATCCCGTCGGGCGCCAGCCCGCGACTCTTCTGAAACGCAATCGTCGCCTGGCGCGTCTTCGGTCCAAAGATGCCGTCTACTGCCAAAGGCGGCGCTGCGCCATGCTGGTTGAGCAACTGCTGCGCATCAGCGACATCCGGTCCCTGGCTGCCGTAACTGATCATACGCCTGCCGCCGCTCTGCAAACCGCTGGAGGGTGGTGACTGCATGGTTTCGGGAAGTCCCAGATTCGCACCGACACCTTGAAGATCGGGCAGCGTCTGCCGCTGCACCCGCACCGCGCCGCCGGTCTGCTGGATGGTGTGGGTCAATTCGTGCGCCAACAGGGCGCGCCCCTCGTCGCTGCCCGGCTGATACTGCCCCGGCGCAAACGCAATGTCGTTTCCAACGGTGAACGCCAGCGCATCGAGCGACCGCGCGACGGTTGCGGCGCGCGCATCGGCATGAATGCGCACCTGGCTGAAATCGTGCCCGAAGCGCGGCTCCCGGTCGAGCGGCGCGCCGCCGCGCATCGTATCGATCACCGCCCCGCTGCGACCGCTGACAGCGCTCCGATCCGCATGTCCATCAGAAGTCTTCTTCGAGAGCGACGATGGCGCTCTCTGGCATGTGCGAGATAGACGTATGCTCATCCGACTTCCCCGTCTGTGCTCTTCTGACGAACTCTCTGCGCAGGAGAGAGGCGCGTTCTGCTCTGTAGGAACGACCGATCCACACCCATTTATTCAACCGCCGGCGCTGTCGGGTTATCCGCAGCGCCTTCGCGGTAGAATGCGTTGCTGTACTCGCGTAATGCAGCGCGCAACTGAGGCGACGTCAAATTCGGGTATGCGCGCAGCGCATCTTCCATGCGCTGCTGCATAGCGCGAACAATCTGCTCCATCGTTTGCGCGTTGAGGATGCCTTCGATCATTGCGAAGGTTGGCTCTAGACCGGCAGCAATCGGCACCGCTTTGTTCGTACCGAAAATATCAAGATTCTCACGGTTCATGCTTGGCGGCAGCAACCCGCCGCGCAGCTCGTCCTGATAGTTGAGCGACGTACAGGCATAAAAGAGCCAGACCCGATAGCGTTGCTCATCCCAGGCGCCGCGATCCGTCATTTCCTCCAGCGTATTGGTTCGCTCGCTGTTGATCTCCCGCCAGTAGGGATCGCGCGGCGTGCGCACGCTGGTATTCGGTTGGTCGTGCAGGCGAGAGTGCGCGCCGATGACGACATTTTCACGGGCGCTGTGCTTGTCGTCGAAATCTGGTCCCAGACCGCCGCGCGCATGTCCCACATAGGTCATGATCTCTGTTTCATTCAGTGTTTCGAGAAAACGACGCGCCGCTCCTTCTCCCGGCGTGATGAGGCGCAATGTCACCAGCACATTCTTCGTCACCCGCTCCCCTTGAGCATTGGGATACGTGATATCTCGACGCATTTCGTACCGCTCATCACCTTCGGCGGGAGAGCCAGCGCTGAGCGTGAATCCCTGTCCTTCGAGCCATCGCCTGGCAGACTCGGCATCGCTGACATGGCTCTGCCCTTCGTCATAGCCAAGCGATATCGAAAAATCGAGACGATCATCCGCCAGCAACCGTTCGTAATCAACGAAATGCTCAGTCGCCCGTCCAGGGGGCGGCGCCACACGGTCCAGCACGGCGATCACGGTATAATCGACGTCCACTCCTGGCGCAAGATGCCGGTCGGCGCGAAACTGACGCACCGCATCGCGCGTTTCGTTGCCAAGCCGACCATCATCGTGAAACCGCAGCAGCGAGTATCCCAGATCGAGGAGCGCCGTTTGCACAGCCTTTACCGGTCTACCGTTATCGCGCGTCGAGAGCGTGCGTCGTCCTTCCCCAATGTCACGCAGCGCAGGAATGGGCGCAAACCGTGGATTGGTCAGCGTCACCGGCGGTTGCACCTCATCACCAACGCCGCTATGTTCCTCTTCGCCTTCACCTGCCTCCTGCCGCTGCACCCGCGCCGCGCCGCCGGTCTGCTGGATGATGTGGGTCAATTCGTGCGCCAGCAGCGCGCGCCCCTCGTCGCTGCCCGGCTGATACTGCCCCGGCGCGAAAGCGATGTCGTTCCCGACGGTGAACGCCAGCGCATCGAGCGACCGCGCCACGGTTGCGGCGCGCGCATCGGCATGAATGTGCACCTGGCTGAAATCGTGCCCGAAGCGCGGCTCCATAAACGCGCGCGTCTCCCGGTCGAGCGGCGCACCGCCGCCGTGCATCGCATCGATGTCCGACTCGACAGCAGGCGAAACGTCAGCGACGACATCGCCTTCCGACACGGACATACGCTGTGCAGGACGCCTCTGATCAGGGCAGCGCGCCTTGATCGCACTGATCGCCTGATGGATTGTCCGATGCACACGCCGATCTCCAGCCAATATGCGCTGGACTGCGCTATCGAGCGGCGCTCCACTTTGCGGCTGCTCTTGCCCCGTCTCCGACTCCGCCGGCGGCGGCTGGTCCGCCTCGCCAGGAAACGCCTGATGAAACGCATGGCGAAATTGACCCTGCTCTGCGCTGTGATCAGACTGCGATTCACGCCGCGCACTGACGTGGTTGGCGGTTCGCTCGAAGCGTCTGAACTGGAATGTCTGCCTGGAAGTCATATGAATCGTCGCTGCCAGATCACATGATGTTGCCGGCGCCTGGCGTATAACTCGATGCAATGACTGCGTTAGCAATGAGCGTATCGGTCTGGGTCACGCCGCCGGTGCGCAGCATGCCGCTGTCGATGGTCATCATCGCCGTATTGATACGCACAAGCGCGCCACTGCCCTGGACGCTGATCGCCCCATCAGTCAGGTCTTCAATCGTCGTGGCGCCAGCCGTCCCTGTCTGTGTTGCTGCCCTCTCCTGCCGCTGCACCCGCGCCGCGCCGCCGGTCTGCTGGATGGTGTGGGTCAATTCGTGCGCCAGCAGCGCGCGCCCCTCGTCGCTGCCCGGCTGATACTGCCCCGGCGCGAAGGCGATGTCGTTCCCGACGGTGAACGCCAGCGCATCGAGCGACCGCGCGACGGTTGCAGCACGTGCATCGGTATGGATGCGCACCTGGCTGAAATCGTGCCCGAAACGCGGCTCCATGAACGCGCGCGTCTCCCGGTCGAGCGGCGCACCGCCGCCGTGCATGGCGTCAATCGCTGCCTGTGTCTCAGGCGTCACTTCCGGGACGGCGCCAGGTTCTTCTTTCGCCTGGATCAGATCTTCCTCTTCCTCAGCAGCGCCTGCCGACGTCGGTTCGTCTTTCTGCGCTGCGCATTCCGCGCACATCTGTTGAATGCCGCCTGCAACACGCGAGGTCTGAACCTCCTCATCGCTCATGCGCAGCACCTGCGACGCAATGCGGTCAGCCTCCTGTTCGTACACGTCGCCCGGGGCGTTGACCATCAGTTTCGTCTGCGGCACACCTGATGGCGCGTGATGGAGGGTGAAGGCGCCAAACGCATGTCCCTGCCCCGCGCCTGGCAGTGCGGTCATCGTCTCGGGCGCACGCTCAAAGGTCGCTGTATGCTGCTGCGCAGCCTGGCGTTGACGGCGTATCATCAGACGTTCGTGCATATGCCTGCCTCGTTTCGCTCAGGGACCCTTCAATCCACCCGGCACGTCGCTGAGACGCTTGCGGTCGATCTCTTCCCACACCATGCGCATCCCTTCCTTAACCAGGTCTTCGGTCAGCACTTCTTCGTAGGGTCGGGCTTTTTTCTTCAGCCACTCCTTGCCGCCTTCCGTACTCTCACGCTCGAACAGGTCACCGGTTTCGTTCTGGGCGATGCGAATGGTGGGTTTGGTAAAGTTCAGGATCGACCCCAGACCGGTGTTGATTTCCACCTTGCCCGACGCATAGCGCGGCATGCCGAGGTCAAGGATGCTTTTTTGCTGGCGCTCCAGAGCCTGGCGCGTCTTTTCGCTCAAGCCGGCAATCTTTGCGCCAGTGATCTTCACCGGCAATTCCGGTCTGGTTCCCTCGATTTCGATCGTGAGCACGCCCGGCATGCCAGGCTCCGCCTTGCTCATATCGGTCGTTTTCACTTTGTCTTCGCCGACCGACATGCTCGGGCTGTCCATCGTGCCGAGTTTCGACTGCGCCTGCGCGATCGCCCATTTCGCCAGCGACTCATCGTACTGCTTCTGAAACGCCTGCGGGCGTTCCCGTTTGACAGCATCGAGCAGTTTCTTCGCACGCACCACCCGCGGATCTTCCGGTCCACTGCTGACTGGCTCGCCTTCCGCAGGAAGGCGCAATTTTGCGCGCGTTTCGAGCAGAAAGTTCTCCTGGGTCTGCGACGAGGCTTCTTCGAGCGCAGCGCGCTGCGCCTCAAGAAAAGTTTCGAGGGTGGGTCCATCCTCGTTCCCCAGTTCATCGACTTTTTTGCCAACCTCCGTGCCGGCTGATTCCTGCGCTTTATCGAACACCTTATCGACGCCGTCTTTTGCAATCGTTTCGCCAAGCCCGGCGAGCGCGGCTTTGATGGGTCCGCGCAGCGCGCCGCCGCCCCACCCCAACAATGCATCGAGCGCCGCTTTTCCGGCGTCTTTCAGCACTTCGACGAGCGTGTTTTTTGGTTTCTCGATTGTTGCCAGGTCTTTCTCGAGTCTGTGCAATCCGTTGCGCTGTCCCTCGAAGGTCAACTGATACTGCAACCAGACGGCATCCAGCACATCTTCGAGCGTCTGGTTGTAGGGCGCTTCAGTCGGTTGCGGCCCGGGAGGAATCGGTTGAGGACCCGGTCCCGGCGTTTCCTTCCGGCGATCAAGCAGAGCATCAGCGGTATCCTGATCGACGATCTCGGCAGGAACCGTACTCCGGCTGAGCATGAAGGTCTCGAGCGCCGCCGAAGTTTTCGGACCCCACATGCCGTCCACGTTGAGGCCGGCGCCGGTTTTTTCGTTCAGTTTATGCTGCAATAGTTTGACCCGTGGGCGAAGGTCCCACGTGCCATAGTTCAAGCCATCACCGCGTTTCAAACCGACGAGCGGATTGATCGCCGAATCGGTCGGCGCCGTGTCGCCAGTGGTGAAGGCGCCGGTCATTCCATCGGACTGTGGCTCTTTGCGCTGAACCAGAGGCGCAGGCGCACTCAGACGCATCTGGTTGAACAGATGCCCATCACCAACCGGCGCACTCTGGTCAACCAAAGCATTCACCGCGCGCCATGAACGCAGTGTTGCTGTCGTCGCTGTCTCAACTGGGCGACGACGTGGTAGTGCGACTCGCTGGCGTTCGGACATTGTTCAACCTGCATTCTGCTTGTAGGCGTTTGCGAGATACATCTCGCGCTACGCCATTGTCGGGTCCCTCGCGCCCCTCACCCCTCGCGCCTCACCCCTCGCGCCTCTCGCCTCACCCCTCGCGCCTCATCCCTCGCGCCTCTCGCCTCACCCCTCGCGCCTCTCGCCTCACCCCTCGCGCCTCACCCCTCGCGCCTCGCGCCCCTCGCGCCTCGCGCCTCACGCCCCGCGCCTCGCGCCTCGCACTTCGCGCCTCGCCACCAATGCGAGATACATCGCGCGCGACGCCATTGTCAGGACCCTCGCACCTCGCGCCTCGCCGCCAATGCGAGATAAATCTCGCGCTACACCATTATCAGGACCCTCGCGCCTCACGCCCCGCGCCTCGCGCCTCTCCGCCAATGCGAGATAAATCTCGCGCTACGCCATTATCAGGACCCTCGCGCCTCACGCCCCTCGCCTCGCGCCTCTCCGCCAATGCGAGATAAATCTCGCGCTACGCCATTATCAGGACCCTCTCGTCTCGCACCTCGCGTCTCGCACCTCGCGCCTCGCGCCTCATACCTCGCGCCCCGCGCCTCGCGCCTCGCACCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATTGTCGGGACCCTCGCGCCTCGCCACCAATGCGAGATACATCGCGCGCGACGCCATTGTCGGGACCCTCGCGCCTCGCGCCTCGCGTCTCGCACCTCGCGCCCCTCGCCTCGCGTCTCACACCCCCCGCCCCCCGCCCCCCGCCTCGCACCTCGCCCCTCGCGTCTCGCGCCTCGCCCCTCACTTACACCCACCCTGCAACCTCGGCTTCGGTGAGTTGCTTTTCGAGTTTGGCGTACTCGGCACGCGCGGCGCGGAGCAGGTGCGCCATCCGGATCGGCTCGCCCGCATCGGCGGCGAGAAAAGCGGCATTGAGCGCAATATTGCGAATGTTGCCGCCCGCAACGTTCAACCGCGCCAGTTTCTCGAAATCAAGCCCATCAGTCGGCGCGCCCGGCGGGAACGAGCGCCGCCAGATCTCGGCGCGCTGCGCAGCATCGGGGAACGGGAACTGCACCACGAACCGGATACGGCGCAGAAATGCCGCATCCAGCGCACTTTTCAGATTCGTCGTCAGGATGGCGAGACCGCGGTAGGCTTCCATGCGCTGCAACAGGTAACTCACCTCGATGTTGGCATAGCGGTCGTGGCTGTCCTTGACTTCGCTGCGTTTGCCGAACAGCGCATCGGCTTCATCGAACAGCAAAATCGCCCCCCCCGACTCGGCAGCGTCGAAGATGCGCCGCAGGTTCTTCTCCGTCTCGCCGATGTATTTGCTGACGACCGACGACAGATCGATGCGATACAGGTCGAGGTGCAGTTCGTTCGCCAGCACTTCAGCCGCCATCGTTTTGCCGGTGCCGCTGGCGCCGGCAAACAGCGCGCTGATCCCCAGCCCGCGCGAACTGCGCGCAGCAAACCCCCAGGTTTCGTACACCCGCGCCCGCTGCCGCACATGCGCCGCGATATCGCGCAAAAGACGTCGCTGCGGCTCCGGCAGCACCAGATCGTCCCATGCCACGGATGCCTCGATCCGCTGCGCCAGATCGTCAAGGCGCGGGCGTGCCTGAGCGCGACTGGCTTCCCAGACGGCGCGCGCAACGTCGTGACCGGCATACTCCTGCACTCGACCGAGCGCCTCGGCGCTGGCGGCGCGAATAGCGTGCGCACTCAGATTGAACTGTGAAACGAGCAGATCGACATGACCATCGAGGTGATCGGCAGTGGCGCCAAGCGCCGCGCGCCATGCATTGCGCTGCTCACGGCTGCTCGTGCGATGCACATCGATGGTGACTGTCACCCGCTGTGTTGGACGCCAGCGATCGCGCGCCGACACCATCAGGGCGCCGCCGGTCCGTTCGAGGAGCCATGTGAGCATGCTGGCGCGCACCGTATCGGCGGGATCGACATCATCGCACTCGACAAGCAACGCACCGGCGCTCAACGCCGCTTCGCGCTCCCATAACCGTATCAGCGACTCGACATCCGCAACCGCCAATGGCATCACGGCGGCATTCAGCGTATGGAGCGTCACCCCGACCGATGCGCACGCAGCAACAGCAATCGCCTGGCGAGTCGCGCGGTCGTCGCCGCACACCTGGATGAGCGGAAACATCCCGCCGCGCGCGCGCCGCCAGACGGCGGCAATACGGTCCGCCAGCGCCTGATGCGACGGCAATAACGCCTCTGTTGCGCGGATCGGCGTTATCAGCCCACACAGCCGCTCATCGAGATACGAGATGCCGGTCAGATAATGCAACACGCGCTCATCGATCCGCAGCGGAGCGCGGGTCAGCAATCCGCCGGAGGCAGGCTCGATCAGACGCCAGTAGCGTAGCGGCGCATCGGGCGCCAGCGCGCTCCAGTGCGCGCCAGGCAGCGCGGCGAGCGCCAGGCTGAAAGTCGGCGACACCCGCTGTGGATCGCCTTGCGCTTCGGCGCACAACGTTGCAATACCCGCGTCGAGTTCCACACCGGCGCAGAGCGCCAGCAGATCGCGCTCGAATGGCGACAATCGAAACGTGGCGCACAGTGTGTCGAGCGCAGATCGCTCATCGGCGCTATCCGACTCTAGAAAAGAAAGCCGATCAGAGGCAGCAGAGGAAACGTGATTGAGGCGTGCAAGATACCGTTCGAGCGCTACACGCACACGCGCGAGCGCCGTTTCTAGCGCGCGATGATTAATGCGTTCCCAGGTTTCACCGGAGATGATGGTCATTTAATGTAATGCGCGCAGTCTATTTATCTATCCGATGGTCACCATCGACACCCGGTACGACAGCGACGGACGATAACGCGCCTGCAACGGCGACCATATCTTCGTCAATTCCTCGCCGCTCAGGTACTGTGGGCGAATTTCAAGTCGTTCTATTTGCGAGCCGGGATCAAACCCTGCCAGCGCCTGAAGCGTCGGCGGCGGAATGCCTCCGTGATCGTCCGAAGCCAGCGTCGCCAGCGCCTCACGAATGGCGTCGCGACCGGCGAACGGCATGCGGCACAGAACCAGTGCAGCGTACCCCAGGAGAATTTCGATCTGCAAGTCCTGCGCGCCATATGCCGTCAGAAGATAGTGCAAATCCAGCCCCAGCGCCATGCGCTGCCCGCTCCGTTCGCCGGTTCGCAGACCGGCATGCGGCGTCACCTGATGAAGGAAGAGATTGATCTGCGGGCGTTCGTCCGCACCGGTGGCGATCCGATCAGGCGGCAGCGCCGAGACAATGGCATCACTGCCAATGCTGGCATTGACGCCTTCATCGACCAATCCGTTCTCGAGCACGCTTTTGAGAAAGGCTGTGACTGAGGCGATGGCAAGGGCGCTGCTCATGACTGCTCCTGAAAGCCGAAGCCTGGCAGAGAACAAGCTTCTTCACGTCACGGAGAGGAAGCAACTCAATTATAATACCGTCTGTCACGAAGTCAATCCCTAAAACAGGTAAAGATGTCAGGATACTACCGCCGCTCAGCATAAGGCGCCGCTCAGCAACCGCCTGACACCTCATGATTACGATCTTCCTGAAAGCGGATATTGCAGCCGGGCGTCTTCTGTGATAGCATTGCAATCGCCTCTGCTGCGACTTGCGTCTCCGCCAAATGACGAGGGAGAAACACTGCCGATGGACGAACATAACAAACGTTCGGGCGACCGTCGGGATGCGATGATCACGTTGCACGTGCCGCGCAGTGTCTTGACGGCGCTCTGGGCGCTGGGATCGCTCATTGCGCTGGCACTTGTCGCCGTCGCCTTTGTTGCCGGGCTGGCGCTGCGCCCGGTGATGCCAACTGCGGCGCCAGTTGCAGTGACGACAATCATTCTGGAGGCGACCGCGACGTCCGCGCCGATTGTTGCTGCGATAAACGTTTCCACGTCGCCAACCGTTGTTGCGTCGCCAACAGCATTGCCAACCGACATCCCTACAACGCAACCAACGATCGACCTCATCCGCCCGACTGCAGCCTTTCCGACAGCCATGCTCCCCACAGCGGCGAGCACCGCAACGCCGGACACGGTCGACTTTCGCATCGACTCCCCGCCAGGAGCGGAGGGGCAACCACCAGCAGCCAACGCGCCGGTGCAGGCAGCAATCGCTCAACCACAACCGCAGGCGGCGCCTCCTGGCGGAGCGCCAGCGGCGCGACCGGCGGATGCCGGCGGCTCAGGCGGATCGGTGCGCCCCGTAGCGACGGCGCGCCCGGCACAACACGCCCTGCGCGGGAGTGTGCGCTGGTCGGCTGCCAGCAGCCCGATCCTTATTCAGAACGACCTGCTGGTGAGCAGCGGCGCATCGCTGATCATCGAACCGGGCGTCGAGGTGCAGATCGGGCGCGGGGTGTCACTGGTGATCGACGGTTCGATGGTGGCATTGGCAACTCCCGACCAACCGGTGCGTTTCACGCAGATCGGCGGCGGCGACGATCCACGGTTGCGTTGGGAAAGCATCATCGGGCGGGCTGGCAGCGTCATCGATCTGCGCAATGTGACGATCACCGGCGGCGGCGCCGGCGGCAGCGTGCTGACCGTGCAAGCGGGGCGGCTCTCGTTACAGAGCGCGCGTATCATTAACAATGGCGGTCACCTTCGTATCGACGACAGTTTTGTGATTATCCGCGACAGCGAGATTTCGGGCAATCGCATGCCCTACGGTTCGGCCATCGACATTACCCTGTCGCGTGGCGGCGGCGACAGCCCTGGCAGCGACATCGTGATTGTCAACAACCGCATCCTGAACAATGCACTGGTTGCCGGAACCGCGCCGCTGCGCATCACGAATCTCAGTTTCGAGCGCCCGGCGCGGATTGAGATCGAGCAGAACCTGCTGGTCGGCGCAGCCGGACCAAACCTGGCGCTCTTTACCAATGCTCAACTGATGGGGAATGTGCGGTGCAATACCCTGATCGGCGGCGCTAATGGGCTGAGCCTGCGCAGCGACGCGCCGCCGAACCTCAGCCCGATGCTCAACATCCGTGATAATGCTATCGAAGCCCACGAACCGCCGAACAATCCGTTCTACCGCCAGTTCAATATCGGCAAAGGCGCCACCAGCGACTTGCCGCTCACTATGACGAACAACTGGTGGGAACTCCCCAGCGGACCGTATGAACCGGCGGCGAACCCGGAAGGACGCGGCGAAGCCGTGGGACCGAACATCACTTTTCTGCCCTGGTTGCCAGAACGCCCGGCGTGCGCGCCGCGTTTCTGAGAGCACGTCGGTGAAGGCGAATCGCCCTCCGATTCACGCAGGCGCTTTGTATAACCTGGTCAGTACTCGACTTGCGCGCCTGCGCGGACCCACTCACCCTGCGCAGCGACGGTCTCATAGGTTCCGGCGCCATAGAGTGTTGCTGTGCCGTGTCCCTCCGCACGAATAGTGATCACACCGCCAACTACCTTCACTTCCATACCCTCGCCAATCAGGGTTATCGCACCGGTATAGCCTGTCAGTCGCACTGTGCCATCGGGGAGAACGGTACGACGCCCTTTGCCCTCGGTCATGATCCGCGTCGCATTCTTGACCCACACAGCGTCGGCGCCGCGCCCAATGGACACCGAACCATCACCGACCAGTTTCACGATACCCTTCCCCTGCGCTTGTAGCGTTCTCGTTCCATCTGCTTCAACCGCCAGTGTAATCCTGGCAGGCGCCAGCAGCGCCAGCATCAACCCCAGCGCCAGCAGCAGACGAAAACCAGTTCTTCCGCACCATCACCAACCTCCTCTCCCGTTTGCCGGTTGTCCGGCGCACCGTATCGTCACGCGCTCAGAATACCGGCCGGATATGAAGAAGTCGCAAAGAGAATTGGAAGATACTGTGAACCGTGATGATCAGGCAGGAGAAACAACGCCAATGGTCAGGAGAATGTTGGCATACACCCGTTGCTCGCCGGTGGCAATAACAAGCGCCGTATCCGGCGCCCGCGCAGCGTCGTAAAAGGCGAAGCGACCAAGCGGTTGCAACGTGAGATGCGGCAGCAGAGCGCGGAACTCCGTGAAGATAGCGGGTTCTGGAGCGGTATCAGGAACCATAACGTGGGCAGATTCGATGGGGATGGCGTCAGCCAGCACAGCCAGCACATCAGTGACAGTCAGGAGGCCAGGAGCGAGATTAAGATACACCCGTTGCGCGCCGGCCGGCGCGCCGGTGGCGAAGGGATAGTTTCCGTCGGCGATCAACACCCGCGACCCGTGGCCCGCACCCCCCAGAGCAGCAAGGATCTGGGGATGGATCAGTTTGTAGTGCAGCATAGACTCCTCTTTGCACAGTCCAACACCGGACGAACACGACACGCACCATGGCGCACAGCGTATCTCGACGCGGCTATGAGACATCGACCGGCAGGCGGTCGCGTAACTCTTCAAGTTCGCGCTGCGCTGCGATCAGTTGCTGACGCAGGTGCAGGATCACCTCCACCCCCGCCAGGTTCACGCCGAGGTCATCGATCAGGCGCTTGATAAAGCGAATCTGCTCAATATCGCTCTCAGTATAGCGACGAATATTGCCGGGAGTGCGTTGTGGTCGAATGAGACCGCGCCGCTCGTAAAGACGCAGACTCTGCTCGTGCATGCCACACAACGCAGCCGCCGACTTGATCGTGTAGTAGCGTTGCTTCATGGCAGATGCGGCTCCTATCGCGCTAGTGCGCGCAACTGCTCGACGAGTTCGCGCTCACGTGGCGAAAGGCTGGTCGGCAACGACACCTCGAGCGTCACGTAGAGATCACCACGCGTTTGCGGATCGCGCAGGCGTGGCATCCCCTGACCGCTGATGCGCATCACCTTCCCATTCTGCGTGCCTGCGGGCACCTTGAGCGCAACGGTTCTTCCTCCCATCGCTGGAACCTTCACCTCGCCACCCAGGAGCATGGTATAGAGATCGACAGGAATCCGCACATAGAGGTCGTCACCGCGCCGCTCGAAGCGTGAATGCGGCAAGACATTGATGACCAGATACAGGTCGCCGCGAGCACCGCCGCCGATGCCAGGAGCGCCTTCCCCGGCGATCCGCACCCGCGATCCGCTATCAACGCCTGGCGGTATCCTGACTGTAATCGAGCGCAGCGAGCCATTGAGCGATTGTACCTGCAAAGTGCGCTGCGTACCGCTGAAGGCTTCTTCGAGCGTAATATCAACCGACTGCTCGACATCCTGACCTTTCGCGCGGTAGGTGACACTGCTGCGCCCGCCGCGCCCGCCGCCGAAGAGGGTCTCGAAAATATCGGCGAAATCGCCGGCGCCAAACCCGCCAAAATCGGGAATATCCTGATAGCGTTGCCAGTCGCGCCCGAATCGGTCGTACTTCGCGCGCTTTTCCTTATCGGATAGCACCTCATACGCCTCGTTTATCTCCTTAAAGCGGGCTTCAGCCGCCTTGTTGCCGGGATTAATATCAGGGTGATACTGACGCGCGAGTTTGCGGTACGCCTTTTTGATCTCGGCGTCCGTCGCATTTCGGTCCACGCCCAATATCTCGTAGTAATCCTTGAAAGCCATTGACCTGCTCTCCGCACGAAGGTGTGACACGTGTTCTATTATATGAACTTGAGCATGGCATTGTCAAGGTTGAGGTTTGACAAATCAGCACGTTTGATGTATCATACAGCCTGCTGGCAGAAACGTCAGCATCCGCGTGCCGAAGTGGCGGAACTGGCAGACGCGCTACGTTCAGGGCGTAGTGAGGGTGACCTCGTGGGAGTTCAAATCTCCCCTTCGGCACCAACAGCAGGGGCGAGATGATCGCCCCTTCTTCCACGATGGGGGATAGTTTAACGGTAGAACGCCTGACTCTGGATCAGGTAGTTGGGGTTCGAGTCCCTGTCCCCCAGCCAGAGGTTCAACGCGCCTGACAGGTGAGTTCGGTCAGGCGCGTTTTGTGCGCCCCCACGTTCTCGGTTCAACACCCCAGGTGTGACGCCGCAGTCCCCCGAACATTGCGATGCCACACCCCGGCGTGGCACTGCAACGCCCCTACTCCCCTTTCACCGCCGTCCACAGGTCGGTGAAGGCGGCAGTCTGATCATTGCGTATTGCCCATTCCAACCGTTTCAGAACCTCATCGTTCGGGGCAAACCCTTCGTTATACAGGTCGATAATCTCCTGCGGCAGCAGTTTGATCGCCTCGACGTTCGGCGAGAGATAGCCAATGTATTCGGCGTTGCGCGCAGCAATATCAGGGCGCATCAGGAAGTTCATGAACACATGCGCCGTATAAGCGTTCGGCGAGTCGGCCAGGATGACCATATTGTCCATCCAGATCATGCCGCCTTCCTTTGGAATAACAAAGGCGATATCCGGGTTGCCGGAGAACTCGTCGCCCAAGCCGTTGCGCGCCTGCAATGCCGAACCGCTCCAGGCATGCGCAATCACATATTCGCCGCTCGCCAGTTTCCGGTTGACATCACTGCTGTTGTACCCGGCCAGGAACGGTTTCTGGGCGATCAACAGGTCCTGCGCTTTTTTCAGCGCCTCCGGGCTGGTTTCATTCAGTGAGTAGCCCAGGAATTTCAGCGCCGCGCCGGGTGTTTCGCGTTCATCGTCGAGCATGCTGAACTGACCGCGATAGCGCGCGATCTCCGCCGTGTCGAACAGCACCGCCCAACTCTCGACGCCGTTGGGGAAGGATTGCCGGTTGTAGGCGATTCCAGTAATGCCGTACATGTACGGCACAGAATAGACATTCCCCGGATCGAAATATTTATTGAGCAGGTCGGGATCGATGTTCTTCAAATTGGGCAGCAGCGACTTGTCAAGTTTTGCGATGAGTCCGTCACGCCACATGATCTCAACCGCATAGTCCGATGGCGTCACAATGTCGTACCCGGAGCGCCCGGCGCGCACCTTGGCGAGCATATCTTCGTTAGCGTCGAAGAGGTCAACAATCACTTTGACGCCATACTCTTTCTCAAAATCTTCCAGGATTGAAGGATCGACATAATCCGTCCAGTTGAAGAATCTGAGTTCACTCGAGAGCCGCGAGCGATCAACCTGCAACTCGTCACCTGTAGACGGTTGCGCCGGAGGAGCAGTCGTCGGCTCGGTTGTCGCGCCGCCGCTGCCGTATTCATTGCCGGGGCTGCCGGTCGGCTGCCCGCCGCATGCTGCGAGTGTCAGCAGCACGGCGAGCAACAGCGCAATGAACCTGGTGCGTCCTTTGAGCATCTTTTGTTTCCTTTCTAACCGTTCCCACGTTCAACGTTCAACATTCAACGCGCGACGACCACCTTCGCCGACGTTGCAACGTCGTTACAGTCTCATCCTCTCGCCTCCTCGCCTCTCCCCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATCGTCGGGTCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCACCTCCTCGCCTCTCCCCTCACGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATCGTCGGGTCCCTCTCCCCTCTCCCCTCTCCCCTCGCACCTCCCGCCCCTCGCCTCTCCCCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATCGTCGGGTCCCTCGCGCCTCTCCCCTCTCCCCTCTCGCCTCCTCGCCTCTCCCCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATCGTCGGGTCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCACCTCCTCGCCTCTCCCCTCACGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATCGTCGGGTCCCTCGCGCCTCTCGCCTCACCCCTCGCACCTCCCGCCCCTCGCCTCACCCCTCGCGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATCGTCGGGTCCCTCTCCCCTCTCCCCTCTCACCTCCTCGCCTCTCCCCTCACGCCTCGCCACAAATGCGAGATAAATCTCGCGCTACGCCATTGTCGGGTCCCTCGCGCCTCTCCCCTCTCCCCTCTCCCCTCTCACCTCTCGCCTCCTCGCCTCTCCCCTCGCCTCCTCGCCTCTCCCCCCCCATTCATATCTCCCGCCGACGCTGCACGAATTGCGAGAGGAACACCAGGGTGATCGACACCAGCAGCATCAGGGTCGAAATGGCGTTGATCTTCGGCGTAATGGCGCGTTTGACCTGTCCGTACACTTCGACCGGCAACAACGAGACGCCGGAGCCGGTGGTGAAGAAGGTGATCACAAAATCGTCGAGCGAGAGGGTAAACGCGAGCAGCGCTCCGCCGATCACACCCGGCATGATGAGCGGCAGCGTAATATAGCGAAACGTCTGCCACTCATTTGCGCCAAGGTCCTGCGCCGCTTCTTCCAGACGCATGTCGAACCCCTTGAGACTGGCGCGCACGACAACGACCACGAATGAAATCGTGAAAGCGATATGCGCAATAGTAACCGTCGCCAGACCAAACTGCAAACGGATACCGAACAAGGTTTCGAGCAGCCCAAAGGAGAAAGCGAAGAACGCCAGCAGCGCCAGCGCCATCACGATCTCCGGGATAACGATAGGCAGATAGAGGAGCGCGTCGAAACCGGTGCGCCAGCGAAAGCGGTAGCGCTCCATCGCCAGCGCAGTCATCGTTCCAATAATCGTCGAAACCACAGTCGATACCAGCGCCACAATGAGGGTGTTCATCGCCGCTGTGAGCAGGCGCTGATCGGCAAGCAGCCGCGCATACCAATCGAAGGTGAACCCCGTCCAGCGCACGCCGAAACTGTCGCGCGTGAATGAGAAGAGCACCAGCACCACGATGGGCGCATAGAGGAACGCCAGTGTCAGGACGGTGTGCATGCCGAGCGCCAGCGAACCGAGAGAACGGCGGCGCTCACCCCCGACGACACGGAGCGATTGTGTTGTTTGGGCATCGATCACGTTCAAACCCCTGAACAGATGAACAGATGAACAGATCAACGATATACCACCCAAAAGACGACCACTTCACCGAACGAGCGGAGAGCGCCTCTGCACTCTATTGCTATGGTTCAGCCTGCAAATCAACGAAAAACGCTCAAAGACGACTTAACGGTCCTCCTCCGTCGTCACCCGAAAATAAATGATAATCGCCACCGTCAGCACAATCATGAAAACAATCGCCATAGCCGATCCGAGCGGCCAGTTCGGCGGGTTTGAGCGAGTAAACAGGCGTTGCAGCAGATTTCCAAGGTAATCGACCTTCGCCCCGCCAAGCAGATCGGACACTACGAACTGCCCCACCGTCGGAATGAAGACCAGCACCGACCCGGCGGCCACTCCCGGCATCGTCAGCGGCAGCATTACCCGCAGAAATGCGCGCACCTGATCGGCGCCCAGGTCTGCCGCCGCTTCCATCAGAGTGAAGTCGAAGCGCGCCAGCGATGCGTAGATCGGCAGCACCATAAATGGCAGGCTGCCATAGATCAGCCCAATCAGCACCGCGCCTTCGGACGGATAGAGCGCGACGCGCGGCAATCCCAGCGACTGAATGGCGCTGTTGATGATGCCGTTATTCGAAAGAATGAGCATCCAGGCATAGGTGCGCACCAGAAAGTTCGTCCAGAACGGAATCAATATCAGAAACAGCAGTACGGTGCGCCAGCGTGGCGGACGACGAACAATGGAGTATGCCAGCGGATAACCGAGCGCCAGACAGATGAGCGTCGTCCACACACCTGCCCAGATCGAGCGCCAGTAGGCGTTAACGTACAGACTTTCCGTGAATAGGGTGCGGTAGTTGTTGAGCGTGAAGGTCCACTCGATGCGCCCGCCGGGTCCGTTGGTCGCAAAACTGTAGAGCACAACGACCACGAGCGGCAGGGCGAAGAACGTCACCAACCAGAAGAGACCGGGGAAGAGGAGCAAGCCGAGTTGCAATCGTTCGCTACGGCGGAGAAGAGCGGCAATCTGCCCTTCGCGTGGTTGAGAGTCAGACGCAAGCGTATCAGCAGCCATCGTCACCTCGCGCTCTTACTCTGTCAGGATGATGGCATTTTCTGCGGGCCACCAGAGATACCCGGTTTCGCCGGGTTGCCAGTAGGCATCACGGTCGAGCGTCGAGCGGCTGTTCTGTTCCCACAGGTCAAACAGGCGGGCGCCCAGGCGCACATCGATCCGGGTATCGCTCCCGATATACGCCACGCGCTCCACCCGCACCTGATGACAGTTCGGCGTGCCGGGCGGAGGCGGTTGCACCGACAGGAACGCTTTCTCCGGGCGAATGGAAAGGGTGACGTTCGTTGCAGGAGGGACCGGACGGATCATCTGACCGCGCATGGTCAACCCATCATCTGATACAATCGTTGCAATACCGCCAGACTCCACCGACTCGACCTTCCCCTCGATGAAATTGGTTTCGCCGATGAAATCGGCGACAAAGCGACAGACCGGACGCTCGTAGATCTCGGTCGGCGTGCCGATCTGCAAGACTTTCCCGGCATTCATAACGGCAATGCGGTCGCTCATCGTCAGCGCCTCTTCCTGATCGTGCGTGACGTAGATGAATGTAATACCGACGCGCTCCTGGAGACTTTTCAATTCGAGCTGCATTTCTTTGCGCAGTTTCAGATCGAGCGCGCCGAGCGGCTCATCGAGCAGCAGCACTTCAGGGTGATTGACGAGCGCGCGCGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGAGTTGCCGCGGTCGGCGCGCCGCGTAGTCGCCCAGGCGCACGAGTTCGAGCGCCTCGGTCACCCGCCGCGACATGTCGGCCGGCGGCGTCTTCTTCATGCGCAGACCAAACGCGACGTTCTCCGCCACCGTCATATGGGGGAAGAGCGCATACGACTGAAAGACCGTATTAACGTTGCGGCGAAAGGGTGGCGTGGTTCCAACCGATTTGCCGTGGAGGAAGATTTCACCCGACGTGGGAAACTCAAACCCGGCAATCATTCGCAGGGTCGTCGTCTTGCCGCAACCGGAGGGACCGAGCATCGAGAAGAATTCGCCGTCACGGATCTGCATTGAGACGTGATCGACGGCGCACACGTCGGCGAAGCGTTTGACGACGTTGCGCAGGTCAACTGCTATTCCGTTGTTCATGGCGCGCCCAGGCAGCATGGTTCACGATAAGCACGTCATCAAACAGTGCAGATGGAACGATGTCAACTCAAGAGATGGCTTTCGCGTTCACAGTATCCTGCTTGCGTTGAGTAATCCGCACAATCCCGAATCGAACGTTCTGGCGAACGGCGTCGTTGCCGCGGAGACGGAGCGCAGCCGTAGCGACAGGCTGATGAAGCGGAACGAATAGTTTTCTTATTATATCATAAAAAGACGCTGTGCCGCCAGGGGATTGAAACGCCGGGTGGACGACGGCATTACCGTCGCCCACCCGTCTCAATGTGCCCGGAACCAAATCCCCCGGAGATCTTCCCGACGCCTGCCGTCGTGCTGAGTGCAGTCGCCGCAACGCTGAGCGGAGCGAAGGGAACGCATCTCGTTCGCCTGCCGTTGAGAAGTGCGCTCGTTGGTCGGCAGGAGGAATCCGCCCGACGACACGGGTTTGGAAGCGTGGTTCACTTGTCTGCTGGCGCCTTTGTGGTTCGATTGATCGTGTATACTTGCACAAGATTCTGCGCGCGGACAATGCACTGACGGAAGGGGGTGACGCCGGCAATATCTCTGGATGTTGATGCCTCTTGAACACGGATGATGCATGCATTCATCGGCGCCTTCCTCTGCGGAACTGCTGCTGCCTCTGTAGTGCTGTGTGGACGTCTTTGAAAGGCATTGCTTCCGGTCCAACGCCCAATCCACAACACCTGACGGCTCCAACTTGCGACTCGACGTTTCAGACAGCATTACCAGGAAGGCAATATGCACCATTCCAGAGCATTCTCCCTTGCGACGATCTTTTTCGTGATCACGCTCGCCGCAGGCTGGCTGCTCTCCGCACCCTCTAGTCGCGCGGCGACATTCACGATCCCATGCGGCGATGTGACGGCGCTTATCACCGCTATCACCACTGCCAATAGCAATAATCAGCCTGACACGATCGCACTCGCTGCCGGCTGCACCTATTCACTGACGACGGTTGACAATACCGTCGGTGGATCGGCAAATGGATTGCCGGCGATCATCATCGATAGCGGCAACCCGACGAACAGCCTGACGATCAACGGCAACGGCGCAACGATTGAGCGCGCGGCGGGAAGTCCGTCGTTTCGCTTGCTGTATCTCACCAACGTTGCTGTGACGATCAACGACCTGACCTTCCGCAACGGATTTGCCGAGGATGACGAAGGTGGCGCAATGCGGGCGCGCAGCCCCGATCTAACGCTCAATCGCGTCACCTTCGAGGGCAACCGCGCGACGTATGACGGCGGCGCGCTTGTTGCGCGCGACTCTAACCTGACGCTCAATCGCGTCACCTTTGAGAGCAATCGCGCAGGGTCCGATGGCGGCGCGTTGTACACGGTTAGCGTGATGGCGAACCTATCAGACAGCATCTTTCGCAACAATCAGTCGGACGCGAACGGCGGCGCTATCGCTTTTCGCGTCGACGGACCCGGACAGGCGACGATCAAAGGTTCGACCTTCAGCAACAATCAGGCAGCCAGCGACGGCGGCGCCATTGCTGCGTTCCACGAGATAACCGTTCAAAACAGCACATTCAGCAACAATCAGGCAGACGGCGACGGCGGCGCGGTATTGTCGAACGAAAGCGCCGTTGTTGCTTACACTACGATCACCGGCACGCAAACCGGCGGCGACGGGGCACTGAACGGCAGCATCACCCTGCGCAGCGCCCTGGTCGCCGGCAATACCGACACATCTACATCACCGGGCAACTACCCCGACATTGCCGGTTCTATCGCCAGTGACGGCTACAACCTGATCGGAAATGTCGGCGATTATGATTTCTCCGCGAACACCACCGGCGATCAGTATGGCGATCCCAATGGAACGACCATACCAAACAGCGGCGCGGTCGAGTCGCCGACGCCAATTGACCCGTTGCTCGCGCCGCTCGCCAACAATGGCGGTCCCACACCGACGCATGCGCTGCTGGCAGGTTCACCCGCACTCAACCGCATTCTGGGAGGGACCAATGACTGCGGCGTCGCCATCGCCATCGATCAGCGCGGCATTTCCCGACCGCAGGACGGCGCCTGCGACGTTGGCGCATTCGAGGCGATACCTGCGCCCGAAATCGTGGTGTACAACGGTCCTGACACGAGCAGCCCGGAACTGACGAACAACCAGACCACGGCTGTGGACTTCGGCGCCACGACAGTCGGCGCGCCCATCAGTCGCGTGTTCGCCATCCGCAATACGGGAACCGCGCCGCTGACGCTTGGCGCGCTGAGCCTCCCATCCGGCTTTGCAGTCGTCGGGGCGTTCCCCACCGGACCGGTCGCTCCCGGCGCAACGGTCACATTTACGGTGCAACTGACGGCGGTTGCCGCCGGGGTGTTCAGCGGCACGCTCTCCTTCGTCAACGGCGACGCCGATGAGAACCCGTTTCAGTTCCCGATCCGCGGCGTTGTGACGGCTGCGACGCCAACGCTTCAGCAGACATACCTGCCGCTCATTGTGCAACCAGGGCAACCCGACCTGATCATCGCCGGCATCGAGATCATTCCCAACCAGACGAGTTTTACAGCCGGTCAACCGGTGGAGATTCGGGTGACGGTGAAGAATGTCGGCACTGCGCCGGCAGGATCATTCTGGGTCGATCTCTACCTCAACCCGGACCGCCCGCCGCAGATCAACGACCTCTGGCACGACCGTTGCGCGCTACGCCCATGTTTCGGCGTCGCCTGGGGTGTGACACAAATCCTGCAACCGGGAGAGCAGATCACGCTCAGCACCGGCGGCGGGTATGATCCGCTCCGCTCCTACTGGCTGGGGTGGCTGGCAAACGGCACAACGACGATCTACGCCCTGGCGGATAGCTGGAACACGAGCGGCGCGAGCGGCGCCGTGCGCGAGTCGGACGAAACGAACAACCGTGGCGTGCGCGACGGTCTGACTGTTAGTGGCGCAAACCCGCCAGCCCCGCCGTGGAAGCCGTCCGTGCTGACAGGCGCAGCGCAGGAGTCGCTTCTGCCCGAACGACCGGCGTATGATGGGACGTTCCGCGCTGAACGTTGAACGTTGCCGCTTGAAGGTTCTATAGGGAGAGACACGGGAAAGGCGCCCCGGTGTGGGCGCCAGACGAAGAAGGCACGTGATCCGTTGGGTTGTTGCTCAACCTCCGCCCACCTTGCGCCCCGGTGTGGGCGCCAGACGAAGAAGGCGCGTGATCCGTTGCCTGTGCGAAAGATCACAGGAAGGTGAAGCGTAGCGCGGGGGGTGGAGGGGAGGCGAAGGTGTTGCGCGTTGAATTGACGTTCGATACAACCCATAACAAGCACAGGTGATCATGCAATGAACTTCAGGAAACTTACCGCCAGCGCGTTGATCATCGCAGGAGCGTGGCTGCTCCTGTGGAGTATGGGATCACGCTTTGATCTGTCGCGTTCGGCGCAGGCGCAGGAATTGCCGCCCCGCCCGACGCTGACGCCGGTTGCTCCTGCGGAAGAGCCGCGTCGTGAGCCACGCCCCGGTCGCATTGTCGGCACAGTGATCGATCTGACGACCGGCGCTCCGGCTGCCGGAGTGACGGTGCGCATCAATAGCGACGCATTGACCACCGACGCAAACGGCAACTACGGGCGCGAGAACCTGACGCCGGGAACGTATGTCGTGGACCTGATCATTCCGCCTGAGCGTGGAACGCCTGCCCAGGGCGCGATCACGATCACGCTGCCAGAGGGAGAGACAGCGCGGCAGGACCTCGCCTTCTACGGTCCGCCTCCAGCGCCAATGCCATCAGCGGAAACCGCGCCTATGCCGCCGGCAGCGCTGCCGGTCACCGGCGCATCCGACGACGCGGCGTGGCTGGCGGCGCTGGGGACGCTGCTGCTGGCAGGCGGAGGATTCCTGCTGCGGCGCGCAACGTAAACGTCGCCCATAGATGGCAGGCAGGCGCGCCCCGGGTGGACACCCAATCGTCGAGGCATCCCTGAGAACGCCCAATGGTCGGCGCGCCCCCCGTAGGCGCCCATGTGACGGCAACGCAGCCCTGCCGCGCGCGAGAAACCGCTTGACGTAGCTGCGCCATAGTAATACAATATCTGAAGTCACGCGATGAGGCTCGCAGAATGCCGCGCGCCGGCTGATAGCCTCTACGGAAAGGACCACTCCGGTCTGCCGTAGAGGTTTTTTGTTTGAAGAGGAGAAGCGCCTGTGAAACTGGTCGGGAGACGTATCATGGTGAATAGCGCTCTTCTGAATGCCATCGCCATTGCTGTGGGAGCGGCAATCGGCGCCAATCTGCGCTACAGTCTGTCGCTCTGGGCAGCCCAACGCTGGGGCGCATCGTTTCCGTATGGTACACTGATCGTTAACGTGATCGGCAGTTTTCTTATTGGATTGGTGCTGGTTCTGGCGACTACGCGCCTGAATCTGAGCGACCTGGCGCGCCTGCTGATCGTCACCGGACTGTTGGGCGGATTCACGACGTTCTCAAGTCTGAGTTTCGAGACCTATTCGCTCATTGTGAGCGGCAGCTGGCGGGTGGCGGGCATTTACCTGGCGAGCAGCTTCGGGCTTGGCATGGCCGGCGTCTTCCTGGGCGCCGGTGTTGCGCGGCTGCTGCCGTAGCAAGGAGGAACAACGTGGATCTGAGTGGTCATGCACAGCAGGTCTGGATTTTTCTGGGCGAAAGCGATCAGTGGCACGGACGTCCGCTCTCGTTGGCGCTCCTCGAAATGCTCAAACGCAACGGCATCGCCGGCGGCACCGTCCTGCGCGGTATTGCCGGGTATGGCGCGCACAGTTTCATTCACACAACGTCGCTCGTCGAACTGAGCAGCGACCTGCCCGTTATCGTAACGTTCGTGGATCGCCCTGATCGTGTGGCGCGGGTCATGCCCGAAATCATGAGCATGGTGCGCGAAGGGCTGATCACCACGATACCGGTCGAAGTGCTCAAATACACCTCGCGTGCCGTTGGTCCCTTCCCAGCGCACCTGACCGTCGCCGACATTATGAGCCGCCAGGTAGTCAGTGTGCGTCCCGATACGCCGATTGCCGTGATCGTCGAGTTGTTGATCGACCGCGCTCTGCGATCGGCGCCGGTTGTCGATGCAGAGAATCGCGTCGTAGGCATCATCACCGACGGCGACCTCCTCACCCGTGGCGCCACCGAACTGCCGCTGGCATTGCAGCGCGAACTGTCGTTGGCGGAGCGCGCCGCCGCAGTCGAAATACTGGCGGAACGTCCACATACCGCCGCCGACCTGATGACTCCTGATCCGGTGACGCTACCGATGACAACGCCCCTGGCGGAAGCAGCGGCAATTATGGCGGATCGTGGCTTGAAGCGCATCCCGGTAGTCGATGAGCAGCATCGACTGGTCGGCATGGTCAGTCGCTATGATCTCCTGTCTACGGTCGCTGAAGGGCTGCGCCAGCGTCCTGCAGAACCGGTCGTGCCATCCGGCGGCGCGCCACAGACCGTTGGCGACATCATGATGACCGGCATTCCGACGGTGCGCCCGGATACGCCGCTGGCGGAAACCCTCGACCACCTGCTCGAAACCGACAAACGCCGCGTTGTCGTCGTCGATGAACATCACCACGTCGTCGGAATCATCAGCGATGGCGACGTATTGCGGCGCGCGGCGAAGCGGGTGCGTTCCGGCGCACTGCGCGCCCTGGCTGCCTGGTTTGGCGGCGGCGCCCGCCCGCCGGGTCTCGAAGTTGCAGCCGAAGGACGCACCGCCGCCGATGTGATGACCAGTCCGGTGGTGACGCTGCCAGCCGACGCGCCAATCACGGAAGCCGTCCGGTTGATGATGACGCATAAGATCAAGCGCATCCCGGTCGTTGACGCCGACAAACGGTTCGTTGGCATGGTCGGGCGGGCAGGGGTGCTGGCGGCGTTGAGCCGGAGAACATGAGGTCGGTCACCGCAGACGCAGGCGTGTGATCTGTCCGTTGCATTGCAAGAGCACCATCACCCCTTTCCCGATCCTGCAACCTGTGCTAAACTGGTGCGGTAGCAGAACCACTGTTGTGCATCCTGCACCGATCGTCTCCGCTTCCGTCCAGAACAGGCGCAACTGCCTTCCATAGGTAACACGGTATCCGCAAAACCCGGCGCGCGCCGGGCATAATGTGAGCATGCACAATGACTGATGCCAACAAGATTATCTATTCCATGATCCGGGTCGGCAAAGTTGTACCGCCGAACCGACCGGTGCTGAAGGATATTTCGCTCTCCTACTTCTATGGCGCCAAAATCGGCGTTATCGGACTCAACGGTTCCGGCAAATCGACCCTGTTACGCATTATGGCGGGTGTGGACCACGATTTCTTCGGCGAAACCGTCATCGCTCCGGGGTACACCATCGGTTTTCTGGAACAGGAACCGCGCCTCGACGACACGCTCACCGTCCGCCAAACGGTCGAGCAGGGGGTGCAGCAGATTGTCGATCTGTTGCGGCGCTACGATGACATCAACGAACGATTCAGCGATCCGGACGCCAATGTGGACGCGCTGATCGCCGAGCAGTCGGCATTGCAGGAGCAACTCGACCATCTTGACGCTTGGGACCTCGACAGTCGCCTGGAACTGGCGATGGATGCGCTGCGCTGTCCGCCGGGCGATACACCGGTTGCCGTGCTGTCGGGCGGTGAACGACGGCGTGTTGCCCTCTGCCGTCTGCTGCTGCAAAAGCCGGATATCCTGCTCCTCGACGAGCCGACCAACCATCTCGACGCCGAGTCGGTCGCATGGCTCGAACGGCACCTGCAAGACTATCCGGGCACGGTGGTCTGCGTGACGCATGATCGCCGGTTTCTGAACAATGTCGCCGAGTGGATCCTGGAACTGGATCGCGGGATGGGTGTTCCCTGGCGCGGCAACTACGCATCGTGGCTGGCGCAGAAACAACAGCAGATCGCCGCCGCTGAAAAAGCCGAAAGTCAGCGGCAGAAAACCCTGACGCGCGAACTGGAGTGGATCAACACAGCGCCGCGCGCCCGTCAGACGAAGAGCAAGGCGCGCATCGCCGCCTATGAGCAACTCCTCAGCCAGAGCGCCGAACGCGCCGAGCGCGACCTGGAAATCTACATCCCACCCGGTCCGCGTCTCGGCGACCTGGTGATCCGTGCTGAGCACGTGACGAAGGCATATGGCGACACATTCCTCTACGATGACCTGACCTTCGATGTGCCGCCGGGCGCGATTGTCGGTGTGATCGGACCAAACGGCGCCGGCAAAACGACCCTCTTCCGCATGATCACCGGTCAGGAACAGCCAGATAGCGGACGGCTAATCGTCGGTCCGTCGGTGAAGTTAGGATATGTCGATCAGAGCCGCGCAACGCTGAACCCGGATCGCACCGTCTGGGAAGAAATCTCTGGCGGCGATGACGTCATGTTGCTCGGCAATCGTCAGGTCAACTCGCGATCCTACGTTGCGCGCTTCAATTTCACCGGCGCCGATCAGCAGAAGAAGGTCGGAACCCTCTCCGGCGGTGAGCGCAACCGGGTGCATCTGGCAAAGGTGTTGCGTTCGGGCGCGAATGTGTTACTACTCGACGAACCAACCAACGATCTCGACGTCCATACCCTGCGCGCGCTCGAAGACGCACTGATCAACTTCGCCGGGTGCGCGCTGATTATCTCCCACGACCGCTGGTTTCTTGATCGGGTGGCGACCCACATCCTGGCATTCGAGAATGAGTCGAGCGTACTCTGGTTTCCTGGAACCTACAGTGAATATGAAGAAGACCGCCGCCGTCGCCTTGGCAAGGCAGCCGATCAACCGCACCGCGCGGTATATCGCCGTCTGACGCGCGGGTGAGACCTGTTGCCGTTACCAATCCTTCTCTGCGCGTTGCTCAACCATTACCGCCCCATGGTGAGGGTTAAGGTAAAGTTGCGTTATCGTGATGTGTTGCACGGGATTGCAAGAGGAGGAGTCTGCCCATGGAAACGTCTGTCATGGAAGTGCCTGCGTATGTCACGAACGAGAAACTCATTCGTTGGGTTCAGGAGATGGTCGATCTGTGCAAACCGGATCGTGTCCATTGGTGCGATGGCTCCAAGGCGGAGTACGATGCGCTTTGTGAGCAACTCGTTCAGTCGGGGACGTTTACGCGCCTGAATCAGGAGAAATGGCCCGGATGCTTCCTGGCGCGATCCGACCCCAGCGATGTGGCGCGTGTCGAGGATCGCACCTTTATCTGTAGCGTTAGCCGCAATGACGCGGGACCGACCAATAACTGGATGGCGCCCAGGGAGATGAAGGAGACGCTCATCCCGTTGTTCGACGGATCAATGCGCGGGCGCACCATGTATGTCATTCCGTTCTGCATGGGTCCGATCGGCTCGCCGCTTGCTCAGATCGGCGTCGAGCTGACCGATTCGGCATATGTGGTCGTCAATATGTGGATCATGACGCGCATCGGCAAGAAAGTAATCGAGGCGCTCGGCAATAATGATTTCGTTCCATGTCTGCACTCGGTCGGCGCGCCGCTGGCGCCAGGGCAGAAAGATGTCCCATGGCCCTGCAATCCGACCGTCAAATACATCGTTCACTTCCCCGAAGAGCGGATGATCTGGTCGTATGGCAGTGGCTATGGCGGCAACGCGCTCCTGGGCAAGAAATGTCTGGCGCTCCGCATCGCCTCGGTGATCGCGCGCGACGAAGGATGGCTCGCCGAGCATATGCTCATTCTGGGAGTGAAGGACCCGAAAGGGCGCAAGACGTATGTCGCCGCTGCCTTCCCCAGCGCCTGCGGCAAAACCAACTTCGCCATGCTCATTCCGCCTAAACCTTTCCAGGAGGAAGGATGGGAAGTTACCACGGTTGGCGATGATATTGCCTGGATCAAGCCAGGACCGGACGGGCGGCTGTATGCCATCAACCCGGAAAGCGGCTACTTTGGCGTGGCGCCGGGCACCTCCTACGACACCAACCCGAATGCGATGGTGGCGCTCTCACGCAACACCATCTTCACCAATGTCGCGCTGACTCCCGATGGGGGTGTCTGGTGGGAAGGGATGACCAAAGAGCCGCCACCTGAGGCGATTGACTGGCAGGGGAAGCACTGGACGCCTGACTCTGGCAGAAAGGCGGCGCACCCGAATGCGCGCTTCACTGCGCCTGCCGCACAAAACCCGGCGATTGACCCCGACTGGGAGAACCCGCAGGGCGTTCCTATTCGCGCCTTCATCTTCGGCGGACGGCGGAGCATGGTGGTGCCGCTCGTCTATCAGTCGTTCAACTGGACATTCGGCGTCTACCTGGCAGCAACGATGGGTTCGGAGATGACCGCCGCTGCGTTCGGCAAGATCGGCGAAGTGCGCCGCGATCCGATGGCGATGCTTCCGTTCTGCGGCTATCACATGGGCGACTATTTCAACCACTGGTTGCAGTTCGGACGCACGATCCCCAACCCGCCGCGCATCTTCAGCGTCAACTGGTTCCGCAAGGACGCCGAGGGCAACTTCCTCTGGCCCGGTTTCGGCGAGAATATGCGCGTGCTCAAATGGATCGTCGAGCGCGCCAATGGTCGCGCGGTCGGCATCGAAAGCCCGATCGGCTGGATGCCGCGCTACGACGATATCGACTGGCGCGGTCTGGAGAACTTCAGCGAGGAGAAATTTACCGAGTTGATGGCGGTTGATCGCGATCAGTGGTCTCAGGAGATTCTGCTGCACGAGGAACTCTTCCTGAAACTCTACGACCGGTTGCCCAAGGAGTTCCGCTCCGTCCGTGATCTGTTGCTCTCGGCGCTCTGGCGCTCGCCGGAGCACTGGGATCTGCTCGATGGCGGTCACTGAGAGTGCGTGCGTTGTGACCCGAAGCGCGCAATGAGAAGCGGTTCCTTCTTCCATCCTGGCGGTATGACCCTCTCGATGTCTCTATCCAGAGCGTCACACCGTCAGGCTGCATCATCGACGGCATCCGCTTCGCGCGCTTTCCCCCGGCGCTCCCTCGCCTGTTTTTCACCTCTGTGATACAATCACGTTCTGCCCGCGATACTCTTTAGAGGAACACGATGCACGACACCGTCGTTCGTTTTGGCGTCGTTGGCGCAGGCAGCGTCGCCGTGCGCGGCTTGCTGCCGCACCTCAGTCAGCCCGATATGCGCGACCGCGTGCGGTTGGTTGCAGTGTGCGACCCGGCGCCTGGCCGCGCTGCGGCTGCCGCCGCACGATTTGGATGTGAGCACGCCTTCACCGACTACGACGACATGCTGGCTGCTGGCGTCGTCGATGCGATCACGATTGCAACGCCGATTGGTTTGCACTACGAGCAGGGACGAAAAGCGCTCGATGCCGGTCTTCACGTCCATTTCAACAAAACCATGACAACGACGGTCGCCGAAGCCAGCGACCTGATCGAACGCGCTGCTGTGCGTGGGCTTAAGATCGTTGCATCGCCCGGAGAGATGTTGCGTCCGCACAATCAGCGCATCAAACAGTTGATTGCCGAAGGCGCCATCGGCACACTCTGCTGGGCAGCATGCGGAGCAGCGTTTGGACGGTACCATGAGGAGGAGTCAGTTCGCCACGGCGCCGATCCGCTCACGAATATCGACCCGACCTGGTACTATCACAAGCCCGGTGGAGGACCGCTGTACGATATGACCGTCTACAGTCTGCATGCGCTGACCGGCATTCTTGGTCCTGCCCGGCGTGTAACGGCGCTGTCGGGCGTGCGCGTGCGCATACGCGAGTTCAGAGGCGCCTGGCACCCTGTTGACGCTGATGACAATACCCTGATCCTGATTGACTTCGGCGACAATCTCTTCGCACTGGCGTATGGCACGCCAGCCGGCACGCTGACTGAGGGATTCAGCGGGAGTTACTTCGGCACGACCGGATCAATTATCGGTCGCAAACTCAATGGACAACCCTTCGATTATCCAGGGCGCGCCGACGCGGAGGCGCACCCCCACGGCGATCAGATCCTTCTTCCCCATGTCGTTGGTGCGCATTGCGAGATCGAGGAACAACACGTATGGGAAGACATCATGCAGTTGATCGACTGGATACGTGATGGAATTCCTTCGATCGTCACCGCTGAACATGCGCGTCATGTCATCGAAATCATCGAAGCGGCGTATCGCGCCGCTGAGACCGGACAAACCCGGGAATTGCACACCACATTCTGATTCACTAGTACTATCGGTAGTGTTCCATATAGTACCAGTGTTTTCAGGAAAAAGATACCTTTGTATGATTGCCACGGCGCCGTGCATCACGTATAGTAAAAGCGTAGTCGGTCGTCAATGCACACAATCTTCCCAGCCGACTACAAGAGGACGCTCAGGCTCACGAGACTACTCACTCACGTCGCAGCCAGCAAATCCAGCCGACATCGCAGCCCGTCTCGCACCAACGCGCCAGCCCGCCTTACCAGGTACCAGTACGTTGCTACGCAGCGCAGGAGCCTGAGCACGAGCCGGACGATAATAGCCCTGGCAACCGCCGGGGCTATTATCGTTCTTGCCGCAGGTCTGATTCTTCACAACCCCACAGCATCAGCGCGGAACCGGTATGCCAGGCACCCGCGTGCGAACGCGGTAAAGCGATGTGCGTGCCGTGATATAGAGAGTCTGCCGATCGGTGTCGCCCCAGGCGCAGTTCGCCGGGCGCTCAGGGGTCACGATGACACCCAGCAACGTCCCATCTGGCTCGAAGACCCAGACCCCGGTTGCGCCGGTGACGTACAGATTCCCTTCACGATCAACTTTCATGCCATCGGGAGAACCGGGCTGCGGGTGATCCATGTCGGCGAAGATGCGTGAATTTGCCAGGCGCCCGTCGGGCAACACATCGAACGCCCGCACGTGGCGACGTGGCGAGTCATCAATGTACAGTATCGTCTCATCAGGCGAAAACGCCAACCCATTAGGACGGTCGAAGTCATCAACGAGCAGTTCGATGCTGCCGTCCGGCAATATGCGATACACGCCATTGCATGGTTGCTCGCGATCTTCAGGCGCAATGCCGTAGGGTGGATCGGTAAAATAGATCGTCCCATCCGACTTCACCACAACATCGTTCGGGCTGTTGAGACGTTTTCCGTCGTACCGATCCGCCAGGGTCACCGGTTCGGCGCCGGGTTTGGCGCGGGAGACGCGCCGGCCACCGTGTTCGCAGGCGATGATATACCCCTGCCGGTCGAGTGTGAGACCATTCGAGTTGCCGCTTGGCTCACGCCACACGGAGACGCCTTCGGTGGGATGCCAGCGGTATTGGCGGTTTGCAGGGATGTCTGAGAAAATCAGGAAGCCATCGGGATGCCAGACCGGACCTTCGGTGAACTCAAAGCCGCCGGCAATGCGTTCAGGATCGCCCGGTTCGATCAGGTGCTTCAGTTTCATGGCCAACGTCGTTTTCTTGTGGAAGAGAAGCGATTCCCTGCCTATAGTAGCACGCGCGCCCTGGACTGACAACACCCTGCGCGCTTGCACAAATTCATTGCGACTATTAAACTTGTGCGAATATTGAGGAATATACGCCGTGACACAATCTGTGAGCGATCCAATCGCCGAACTCCAGCGGGAGATCGATGCGCTGCGCATTGATCGAGAGCGCGACCTGCGGGCATTGAATGTGCTTCGCACCGTCAGCATCGCATGCCTGGGGAAACCCAACGCGCGCGCCATCTTCGAAGCCATGCATCAGGCGCTCCTGCCTGTGTTCCGGTACGATGCGGCATACTTCGCCGTCTGTGATCCCGGCAATCGGGAAACATTTCGCGCCGCGTTGCTCGTTGATGAAGAGAGCGTCGAATATCTGGAACACACGCCGTATGGTCCGCTGACCGGCATGCTGGTGCAGCATCGTCAACCATTGCTCTTTTACGACCTGCTGCACGAGCGCACGCTGCTGACACCGCCGCCGGAACGATTTGGCAATCAGCAGAAGCATTCACGATCCTGGATGGGGACGCCGCTGCTGCTCGGCTATGAGACGGTTGGGGTCATGTCGATCCAGAGTTATCGGCCAGGAATCTACAATCAGGATCACCTCGATCTGTTGCAGCGGATAGGCAACCTGCTGGCGGTGGCGCTGGAGAATGCGGCACTGGTGGAACAGCAACAGACGTTGAGCAACGAACTGACGGAGCGTATCGCGGCGCGCACCCGCGAACTGACCATGCTGACGGCGCTCGCCGAAGAACTCGCGTTCCAGCGCCCACTCTCCGAGTTGCTGGATCGCGCGCTATCGCTCCTGGTGGATCATCTTGCCATGAGTGGCGGCGCTGTGCGATTGCTCTCTTCCGATGGCGCGGAACTGACCCTCGCCGCCGCCTATGGGTTTCCTCCGGCGTATGCGGATCAGTTGGCGCGAATCCCGGTTGCGAGCAGTCTGATGCGCAGCGTCATTGAAGAACGTCGCCCGCTGATCATTGATAATCTTGCGCAGAGCGAGCACTGGCAGCGTCTTGGGTTGCACTACCGCTCGTTGATCGCCGTTCCGCTTCAGATCGGTGATCGGGCGCTGGGTTCCTTGCTGCTGGTCGATACGCGCCAGCGCGCCATTCAAGACCAGGAGATCGAATTTGTGCGCACCGTTGGGCATCAGATCGCTATCGGCATCAAGACTGCGCAGTTGCTTGCCGAGCGCGAACGGCAGGTCGCCGAACTATCGGCGCTGAGCGACATTAGCCACGCGGCGAGCACCACGCTGGAACTGCGCGCGCTCCTGCGCCACATCGCGCGCGCCCTCGCCCGCTTCATGCGCGCCGACGTTTTTTCCGTCGCAGTCTACGATGCTGAACGAGACGTTATCAGCGACGGCTTCTCGATCGATGATGGCGAAGAGCATTCCTTCTGGCAGTTTCAACCGCCGCCGTCGGACTCGTTGACCGCGTGGGTGCTGCGCAACCAACGCGCGTTGCGTTTCGATAACCTGCTCGACGAGATCGGACGTTACCCGGAACTGCGGTTGCACGCTATCGGTACAGATCGCATGGCGCTGTCGTGGCTCGGTGTACCGCTGATCGGGCGCGAGGGGCAACCGATTGGCGTTCTCACGGTGCAGGCATACTCACCCTGTGCATTCGATGATCGCGATGAGCGGTTTCTGGCGGCGGTCGCGCGCCAGGTGGCGTTGCACGTGCAGAATGTCATGCTGTTCGCCGCCGAGCAGGAGGCGCGGCGTACCGCCGACACGCTGCGCGAAGTGGCGCGTGTATTGAGCGCTGCGTTCAGTTCGGGTGAAGTGCTGAACGTGATCCTGCGCGAACTGAAAAAGGTCATTCCCTACGATAGCGCCTCCATTATGTTGCGCGAAGGGAGGGTGCTGCGCGCCGCTGCCGTTGCTCCTGAGCATATCGCCACCCGACTGGACGCAATGGACCGTCCACTGAATGAACCCGGCGCTGCTGTATGGGTTGTACACCACAAACAACCACTTTTGATCGAGGACGTCAGCGTATCGCACATCTGGGCGCCCAAACCGCAGATCAGCAACATCCAATCGTGGATCGGCGTCCCATTGCTTGTCAAAGGTGAGGTGCTCGGCGTGCTGAACATCGACTCAACCCAAAAGGGGCGTTTCACCCAGCGCGATGTCGAGGTGGCGCAGGTCTTCGCCGACAACGCCGCGATTGCTATCGAAAACGCCCGGCTGTATGCTGAGTCGATTGCGCGGCGCGAACAGGAGCTTGAGATCGCGCGCCGTATCCAGTCGAACCTGTTCCCCCGCGAGCTGCCGCGGCGTCAGGGGATCGCGCTGGCGGCGCGTTGCCTGCCTGCCCGTGAAGTCGGCGGCGATTTCTTCGACTGTTTTGCGCTTGGCGAACGCCGCTCGATTGCGGTGATGATCGGCGATGCGTCGGGCAAGAGTGTGGCAGGAGCGCTCCTGATGGCGATGGCGCGGTCGGTTGGACGCGCCGAAGCGTTCGATCATGAGGAACCGGCGCTGGTGCTGCGCGAAACGAATCGGAGCGTGGCGCACGATGTGCCGCGCGGCACTTTCGTGGCGCTCTGCTATGCGACGATTGATCCGTCGGGGCGCATAGCGGTGGCGAACGCCGGACAGTTGACGCCGGTGCTGGTGCATGCCGACGGTGCTATTCAGTATCTCTATCCGCCAGGACCAACCCTGCCGCTCGGCATTCAGTCCAATATCGGGTATGAAACGCTTGCCATCGATCTGGCGCCGGGCGATACGGTCGTGTTCTTTACCGATGGGCTGGTCGAGGCGCACAATGCAACTGGCGAGTTGTTCGGCTTCGAGCGCCTCGATGCGCTCCTGACGAAAGAAGCCGGTCTGCCGCCCGACGCCCTCATCGACCGCATCATCGACGAAGTGATAGCCTTCATGGGCGATACGGTGCAACACGATGACATGACCCTGGTTGTCGTGCAATTCGGCGGGGAACGGACGAACGATTGAGACGGTGCGGAGGATGGACCAACATCTCAGTAGTGGCACACCAGCACTCGACCGCGACATTCCCGGTTGCTCATATTGATCGTATTCCTCGGCGGACAAGAAGAGGACTGGATCGCAGATCACCCGTCGTTATCTCAGCGATCCGGCGCACTGTGTATGCCTGCTGATGGCGACGTCGGTCTATTGGCAGGACGCCTCTTCATGAGACGTGGCGCGACAGGATGCATTGCACGGGCGCATCTAGCGCTCGGATTGCCGGAATCTCAGCCGGTTTGCGCCTGGTGTGCGGCGGACGGCTCGCGGTTGGCGTCATCAACGAACCATCCCGCATGCGCTCGCACCGTCGATGTCTCGATTCGTAGCGATGGTCAGGCGATGATTGAAGGAAGTGCGAGAACGCTATTGAGCGCCTGGACTAACGCCATGGCGCCTTCCCAGAAGGAACTGCTCAACCATAAGGCCGATCGATGATACATACCCGCGTATCTGCTCCACAAATCGCCGGAAATCGTCCAGCCGACCGAGCAGTTCGTACAGGCGCTCAGGGTCCGCCCGGATATATTCATGCCTGCGAGCGAGCCGGTGGCGCACCCCTACCTGTCTCCTTCCACCCGTGAAATGTCAACTTTCCCCTCTTTTCCCTTCCACCTTCGCATCTTCCACCTTCGCACCTGTACCCTCGCGCTTCTGGTCACTACAACCCGTGGTATGATAGACCCCGTTCGTTCTTGCCAAAGGAGCCGTTATCATGCTCTTCTTCACCGTCGAAAAACTGAAGGCGCGTCTGGAGGAGATGCGCGCCGCCATCATCCGCGACACGCGCCCGATCACAGACGTGTTCACCTGCCCTGTGCCTGGCGCCCCCTCAGAGCATGCGATGTCTCCTCCGCCCCCGCCCGACGATCCTTCCTGGCGTCCATTGAAAGTCGGCGAACGGTGGGGCGGCGACCCACACAATCCCGACAAACCCGATGAACCGTTGCCGTGGGGTATGCCGGTCGATGGCGGACATACCCACTGGCTGCGCGCCATTATCCGCATCCCTGAAGAATGGCGCGGACGTCAGGTGCTGATGCGTATGCGCTGGTCCGCGGAAGGGCATGCCGGGATTGAAGGCATCGCCTACCTGGACGGAACGACGCTCGCCGGGATCGATGAGCCACACCCGGCCATCCTGCTCCCTGAACACGCACACGAGGGCGATCACGAACTGTTGATCCGCTGCTACACTCCCTATCGCCGATCCTTCGGCGGATTGGAACTGCAATTGCGCAGCGACATCATTGCTCGCCTGGCTGCCGTCATGTATGCCATTCTCGATGCTCTTCCCACCTACCGCGACAGCGACCCGGAGAAGCATGCCTTGCTCGACCGGATTAACCGCGCTTACAATCTGCTCGACCTGCGCGAAGGATGGCAGAGCGAACGCTTCGAAATCTCGGCAGGCGCGGCGCTGACCTTCCTGCGCGAAACGTTGACGGCGAACCTGGCGCCGGGACAGCGCCCGATTATTCTGGCGACGGGTCACGCACATATGGATGTCGCATGGCTCTGGCCCCTCTGGCGCACGCATCAGAAAATTGCGCACACCGTTGCAACCGCGCTGCACTTGATGGAACGCTACCCGGAGTATCACTTCAGTATGAGCCAGCCGCAGACGTATGCGTTCCTCAAACAGGATGACCCGGAACTCTATGAGCGATTGCGACAGCGCGTGGCGGAAGGGCGCTTCGAGCCGGTCGGCGCAATGTGGCTCGAACCGGATTGCAACGTCACCGGCGGCGAGTCACTGGTGCGTCAGGTCATTCATGGGATCCGCTTCTTTGAGAATGAGTTTGGTCCGATTGAGCATATCGTCTGGTTGCCTGATGTGTTCGGCTATTCGGCGGCGTTGCCACAGATCATGCGACTGGCGGGCATTTCCTGTTTCATGACGACGAAGATCAGCTGGAACCAGTTCAACCGTATGCCGTATGACACGTTCCGCTGGCGCGGCATCGACGGCTCGGAAGTGCTGGCGCATTTCGTGACCGCAACCTCTGCACCGGTAAAACCCAACCCGACCGAAGCGCAGTTCTACACCTACAACGGGAGCATGCTGCCGTCCGAAGTCTTCGGAACGTGGAATCACTACCGCCAGAAAGACATCAATGACGAGGTGCTCTACATCTACGGGCACGGCGACGGCGGCGGCGGCCCGACCGAAGAGATGCTCGAACTGGCGCGGGTGATGGCAGACTTGCCGGGATTCCCGGTAGTGCAGCCCGGTCGCGTTGAGCAATACTTCCAGCGGCTGCGGCAGCGCGTCTGGAACAATCCACGGTTGCCGGTGTGGGTCGGCGAGTTGTACCTGGAGTACCATCGCGGCACGTACACGAGTCAGGCGCGCACCAAGCAGAATAATCGTCAAGCGGAACTGCTGCTGCGCGAAGCCGAATGGCTCAATGCGTGGGCGGTCACCCACGGCGCAATCAACCGCCAGGCGGACCTCGACGCTGCCTGGCGCACGGTGCTGCTCAATCAGTTCCACGACATTCTGCCCGGCAGTTCGGTGCCGCTGGTGTACGTCGAAAGCGAGCAGCAGTTTGCTGAAGTGCGCGATACGGTCGAGACAGTGCGCCATGCCGCCATCACCGACCTGACCGGCAGCCATAGCAACGGCGCTGCGCCACACCTGGCGGTGTTCAACGGTCTCGCCTGGGATCGGACGGAGTGTGTTGCAATTCCGCTCGAAGACCTGCGGCAGCCACTGATTGAAGGTCCGACGCAGGTTGTCGAGCAGATCGATGGAACGCGCACGCTCCTGGTCGAAGCAACCGTCCCCGCATTCGGGTATGCCGCGCTTCGCGCCGCGCGACATCCATCCCCGCCGGCGCAGTTCATCACCCGCCGCGACTACCTGGCGTCCGATGAGTTCCGCATCGAGTTCGACGCAAATGGCGAGATCGGCTCACTCTACGATGCCCGGTACGAACGCGAGATTATCGCCGAAGGCGCCACCGGCAATCAACTTGTACTGTACGAAGACCGCCCGATGTTCTGGGACGCCTGGGATATCGATCCGTTCTATCTGGAGAAACCATATCCTATCCACAACATCAGCGAATGGCGGGTAATTGAGGAGGGACCACTACGCGCCACGGTAGAGATCGCGCGACGCTTCGGCAGAAGTACGATCCGCCAGCGCATCAGCCTGTGGCACAACAACCGTCGGATCGACTTCGAGACCGAGGTGGACTGGCAGGAGCGCCAGAATCTGTTGCGCGTCCTTTTTCCCTTGCGGCTTAACGCTGCCCGCGCAACCTGCGAGATCCAGTTTGGCGCGGTTGAGCGACCAACGCACCGCAACACGAGTTGGGACTGGGCGCGCTTCGAGGTGTGCGCACACCGCTGGATCGATTTGAGTGAGGGCGGGTATGGCGTGGCGCTGCTGAATAACGGAAAATATGGGCATAGCCTGCTCCACAATACCCTGGGCATCTCACTGCTCAAATCGGCAGTCATCCCCGATCCACAGGCAGACCGTGGGCTGCACCGGTTCATCTACAGCCTGCTGCCACATGCCGGCGATTGGCGCGAGGCACAGGTCACCCGGCGCGCGTATGAACTGAACGCCCCCTTGCGCCCGGTGACGGTCGCTGGCGAGATACCGGCGGAAGGACGATCGTTCCTGCATGTTGACAGCGATCACGTAATCGTCGAAACAATCAAGACAGCAGATGATGGCGACGGTTTGATTGTGCGGATGTACGAAGCGCACAATCAGCGTGGGCAGGTGCGCCTCGAATTCGGGCAACCGGTCGAGTCGGCGGTCGAAGTCGATCTCCTGGAGCGCGAGACCGGACCGGTAACCGTGGACGGGCGGACGGTGCGGTGCAACGTGCGCCCATTCGAAATCAAAACCATTCGCGTGCGTTTGAAACCGCCGTTGTAGTAGGGACAGGTCTGAGACCTGTCCCGGAAAGGACAGGGCTGAGACCGGTCCCGGAAAGGACAGGGCTGAGACCGGTCCCGGAAAGGACAGGGCTGAGACCGGTCCCGGAAAGGACAGGGCTGAGACCTGCCCCGGAAAGGAAAGGGCTGAGACCTGCCCCGGAAAGGAAAGGGCTGAGACCTGCCCCGGAAAGGACAGGGCTGAGACCGGTCCCGGAAAGGACAGGGCTGAGACCTGCCCCGGAAAGGAAAGGGCTGAGACCTGCCCCGGAAAGGACAGGGCTGAGACCGGTCCCGGAAAGGACAGGGCTGAGACCGGTCCCGGAAAGGACAGGGCTGAGACCGGTCCCGGAAAGGACAGGGCTGAGACCGGTCCCGGAAAGGACAGGGCTGAGACCGGTCCTGGAAAGGACAGGGCTGAGACCGGTCCCGGAAAGGACAGGGCTGAGACCTGCCCCCACAGGTCTGAGACCTGCCCCGATGACCCCGACGACGACAACGTCAACGTTGACCATGGTCCTGCCCGATATGGTCGCCCTGCCCCATTTCGCACACCCGACGATCAACCCGCCGGTGCGTCACCCGGCGGCGGTGACGGTCATCATCGAGAGAGACGATATGAAAACCCATCCATTAACCGCCCTTCAGGTCATCGGCGTGCGCTATCGCGGCAGCACACCTGCCGAAAACGACGAGCGCGCGCTCGACGCTTATGCTGCCTCCGGCGTCTACCACGCCGCCAGTGTGCCGACGACGATCAGCGAACCACGGATGCCGGCAACACAGCGTCGCATTGACGAACCATCGAACCTGGGTTGGATCTGTCGCGCTATCGCCGATGATGTTGCCGCGGCGCACGCGCGTGGGCGCGCGCCGCTGATCGTCGGCGGCGACTGCACCCACGCCGTTGGCGTCGTCGCCGGGCTGCAACGCTCCCACGGACCGAATGCGCGCATCGGGTTGGTCTGGTTCGATGCGCACGGCGACTACAACACGCCACGCACAACCCTCTCCGGGATGCTGGGCGGTATGCCGGTGGCAGTGTGCGCCGGACTGGCGCTGCCGCAGTGGCGCGACCTAGCGGGGATGCAGGCGCCATTGCCGACCGACCGCATCATGCTGGTCGATGCGCGTAACCTCGACCCGCCCGAAGAGCAGTTGATCCGCGCCACCGAAACCGCTATCGCCGATGTCAACGATTTCGCCGGTCCTCTGGCATCGCTCGCGGCTGCTTGCGACGTGCTCTACCTGCACGTTGACTCCGACATTCTCGAGGCTGCGCTCGTGCCGAACCACGCCACCCGCGAACCAGACGGACCGGGGCTGTCCGAGGTAAGCGCGGCCATCGACACGGTCATGGCGACCGGCAAGGTTGGCGCGTTTGCGGTTGTTTCGGTGTACGGCGCCGGTCCCGGTAGCGACATCAGCGTCGCATCGGGAACAGCGCTCATTCGCGCTGGATTGGAAGCCTGGGCGCGACATGGGACGGTGTAGACCGCACCGTTCATTCGAACGCCCGGTTCGCAGGCGCAACGATGCACAACCTGCACGGCAGTCGTGGACGCTAACCGCGCCTTGGACTTAGCTGAACGTGGACGAACGCCCACACTTGTGGAGTGGTTGGCTGAGCCTGTCGAAGCCAACGCCAATGACAAGACGGTCAACGTGTCCTGCACCCTGCGCGCCCTTATCCACGATACAATCCTTCGTGGAGGCGCGTATGCACTCACCATTTCCGGGCACGGACCCGTATCTGAAGTCAATGGCGATCTGGCCCGACGTTCACGCCGGGCTGATTGCTGCCATGAGCCGGCAATTTCAGCCCTGTCTCAGCCCACGATATGTGGCGGTCATTGTGCCCTACACGGCGTTTTGAGATCATCGACAACAATCTTTCCCGGTTTCTCGTTTCCGATAGCACTATCATCGAGCGTGATCAACAGCGTAGCGTGACCGCTGCAACTGTGGCGCCGGCGCCAGTGGTTGGAGCGCTGGAAGTTGAGGTTGAAACACGCTACAATCGCCTTGAAGTGCGCACCGTCGGCGACGAAACGGCTGCGCTGGCGAGTGAATTGCTCTCGCCGGCGAACAAGCGCTCAGGCGCCGATGCTGCCGACGAAGCCTGACGTACTGAACGCCTTGCCGCTGCTGGTCTGCGGTAAAGTATGGCGGCGCCCTATGGCAGTCACATCCCGTCTCTACGCCGGTGAAGATGATTACGCGCGGATGCGCCAGTTGCTGGCGGAAATCGAGGCGCTCGAAGGTCCGCTCGTCTACTGCCACGTCGGCGACCTGGACTGGTGGCGCTTCACCGATGAGGACACCCACGCGCTGGCAACGCGCATCCGCCTCTGGTTCGACCATCAGGGTGCGCTGGTGGGGTTTACCTGGCCCAGCGAACATCAGGTCGATCTGCTGGTCCATCCAGCGTACCGTGCCATCGAACCGGCGATGCTCGATTGGGTTGAGCATCTGAGCCGTCTTGACGTTGACGATCCCAAGCCACACGTGTCTGTATGGAGTTATGAGCACGATGCGTACCGCAATAATCTGCTCATGCAGCGCGGATATGTGCGCACAGACCACTTCCTGTCGCTCAGCACACGTGATTTGCATGAACACGTACCGGAGCCGGAAGCGCCGGCCGGCTACACCATCCGCCACGTTCAGGGCGAAGCGGACGTGCACGCGCGCGTCGAAGCGCACCGCGACGCCTTTGCCTCGTCGCGGATGAGTGTTGCCAAATACCGCGCTGCGATCCATGCCCCGACCTATCGCCCCGATCTCGACCTGATTGCGGTTGCGGACGATGGAAGTGTGGCGGCGTTCTGCACCCTGTGGTTCGACTCGATCAACCGCATTGGTGAGATTGAACCGCTCGGTTGCCGGGCTGCCCACCGCCGCCATGGGCTGGCGCGCGCGCTCGTGCTCGAAGGGCTGCGTCGTCTGCAAGGGTACGACGCGCACCTGGCGACCGTGTTCTATGGAAGTGAACCGGAAGACCAACCGGCGCGTCAGTTCTACGCGAGCCTGGGGTTTATCGAACGCGGGCGTATGTATGCGTGGAAGAGGGGTTAGGGGTTAGAAAAACTGTCTCCTTGCTCACGCGCCCCTCGCTCATCCGCTCACCTGGCCGCAACCGTCACGTTTCCTCTCCCAAGACCCTTGAGACGATATGACATCCTCGAAGCAGGCGCAAACCCTTCCTCTGGTGACGTCCAATGGCAGGAAGCAGGGTTACGAGCAGACCTCACGAGTCGGGGACATCCTTCGACCTGCTCGACACGCAATGTGGAACCTCCCCGCGCTTCCCCTTCTACGACCCGCTCCCGCGCTCGGTGACTGTCATCGGCATCTGTTCATCAACTATTCATTCGCTAGCGCTACGATGACGCTAAGCGCGAAGCACGGACACAGGAAAGTCACTTGGATTGGAATAGAGATCATCGGATACAGACCAATCTTCGAGGTATTTTCCACCAGCGCAGCACCGGCTGCTCGTGAGCAAGACGCGATGACAGGAGAAATAAGGTTCATATGCGCACACAATTGACAGAAGGGACTGCAATGAGGTTCATTTCTTTCAATCTCTTCATCCGCGCGCTGACCATCGTCAGTTTTGTCGTGGGATTGATCGGCGGAATCGGTCTCATTCCTCGTCCGGTGCGCGCCAATGTGCAGCCATCCTGCTCCACCACGCCGCTCTTCACTAATGGCTCATTCATTACAGGAACCGGCAACGGCGCGAGCGGCGCCAATACCAGCTCGCCCCAGGGCACTGACACCGGTTTCGGATACCTGGTCGATCCGACGCGCACACAAACCGTCCCCGCCGGTCCCGCTCGCGCTCGCCTGGCGGACGATTTCACTGTGACCGGCAATGGGTGGCGTCCTTCTGCGATAACGCTCTACGCTTATCAGATCAACAGTGGTACCACATCGACCATCACGGGAGTGGTCGACCTGCGTCTATGGAATGGCGTCCCCGGCGATGGCGGCGCAGTGATCGCCGGTCCGGTGAATGGAACAATCACAAACAATAACTGGACAAATGTTTATCGCGTGCCTGCTAATGACCCAACGCAAACATCCCGACCGATCATGGCGGTGACGATCAACTGGCCCTTTACTGTCACTACCTTGCTGACCGGAACCTACTGGATCGAGTGGGGCATGGCAGGCAATGAGAGCCTCAGCGGTCCCTGGGTTCCCCCCGTCAGCACCGGCACTACCAACAATGCGCGCCAGCTCGATCTGACCGGCGGCGAGCCGGGAACCTGGGCGCCACGCGGTGACTATACGAATACCAGCAACATTGTTGAATTCCCGTTCGTCATCTGCGGCTCGGAGATACCCACACCACAAATTACAAGCCTGAGTCCGAACGCAGTAACCGCTGGCAGCGATGAGTTCACACTGACGGTCAACGGCAACGGCTTTATCGATGGCACAGGGTCGGATCGCTCGGTCGTGCATTGGAATGGTAGTCCACGCGCAACGACGTATATCTCCAGCACCCAACTGACCGCGACCATCCCCGCCAGCGACATCGCCACGGCAGGCACGGCGAGCGTGACGGTCGTCAATCCAGGCAACGTTACATCGAATACGGAAACGTTCACGATCACCAACCCGACGCCAGCGATCAGCAGCCTCAGTCCGTCCACCGCCGTCGCAGGCAGTTCCGGCTTCACCCTCACCGTCACCGGCACGAACTTCGTCAACGGGTCGGTCGTGCGCTGGAACGGCAACGACCGCACCACTACGTTCGTCTCCGGCGCCCAACTGACCGCGACCATCCCCGCCAGCGACATCGCCACGGCAGGCACGGCGAACGTGACGGTCGTCAACCCTGCTCCCGGCGGCGGCGAATCGGGCGCAGCAACGTTCACCATCATCAACCCGACGCCGACGATCACGGCGATCAGTCCGTCGTCGGCCACGGCAGGCGGTTCCGGCTTCACCCTCACCGTCACCGGCACGAACTTCGTCAACGGGTCGGTCGTGCGCTGGAACGGCAACGACCGCGCCACCACGGTCGTCTCCAGCACGCAACTGACCGCAACCATCCCCGCCGGCGACATCGCCACAGCGGGCACGGCGAACGTGACGGTCGTCAACCCTGCTCCCGGCGGCGGCGAATCGGGCGCAGCAACGTTCACCATCAACAACCCGACGCCGACGATCACGGCGATCAGTCCGTCGTCGGCCACGGCAGGCGGTTCCGGCTTCACCCTCACCGTCACCGGCACGAACTTCGTCAACGGGTCGGTCGTGCGCTGGAACGGCAACGACCGCGCCACCACGGTCGTCTCCAGCACGCAACTGACCGCAACCATCCCCGCCGGCGACATCGCCACAGCGGGCACGGCGAATGTGACGGTCGTCAACCCGGGTCCCGGCGGCGGCACATCCAACACCGCGACATTCACCATTCAGGCGAGCAACCCAACGCCGGTGATCGGCAGCGTCTCGCCAGACCTGATACCGGTGGGAGACACAGATGTCGTTCTGACGGTCACCGGCAACAACTTCGTTGCGAATTCGGTGGTGCGCTGGAATGGAACGTCGCTCACAACGACATTCGTCAGCGCGACGCAGGTGCAGGCGACCCTCCCGTCAGCGCAACGCAGCGCCGCAGGTGATGGAAGCGTCACGGTCTTCAATCCGGCGCCCGGCGGCGGTGTGTCGAATGCGATCACGGTACCGGTGCGCTTCCAGGTGATGCTGCCGCTGGTTGTACGGTGATACGTTCCATTGTTCCCTGGGGCGACCCGCCGATTCGCCCCTTATACAGGTGTCGATTTTCCGACAAGCCCTTGCGGTGCATTATCCGTTTTTGGGCATCAGAATGTCTCAACTTTCCCTCTCCAGCGGCGCCGGATGCCGGAAAGGGAGCAGGGGGTAGGGAGAGAAAGGCTTCGGGACACAGCAACCATCCCTGGTTCCCGAAAAAACTCTATTGTTGAGCGTGGACGCCTCTCCCCGGACGCGCTCTGGACCCATCACGGACGCCCCTGCTGCCAGATGTTGCGACATCGTTGCCTGTGGTATCATAACCCGCACGGCGCACCGGTCTGGACGGGGCGCATTGACCTGCTGCCAGATGTTGCGACATCGTTGCCTGTGGTATCATAACCGGGCATCGCAGTCGTGACGTTCAGGAGTCTCCGTGGAGCCGAAAACCCTCGCCAATCGCCTCTCTGCCGCTTCGATTGCCTGGCGTCCGGGTATAGCAATGGCATTACTGATGGGCTATTTTGTTCTTTTCGGCATGACGGTTGGCGGACAGGGGGTGCTCTGGGCAGACATTATTCACACCTTGCGCATCAGTGAAGGTGCGTTTGGGTCGGTCCAACTCCTGCCGCCACTTATCGCAATGGGATTGCTGGTTCTCGGTGGTCCGCTGACAGTGCGGTTCGGCAAAAAACGCCTCGCTATCACTGGACTTATCGTGCTTGGTCTCTCGTCACTCGGACTTGCCGCCGCGAGTGACTTCTTGAGTTTCAGCATTGCCCTTGCACTCAGCGGTCTGGGGTTCGGCGCAGTCGAGATGGCAATGAATAGCGCTACGCTAGATTGGGAACAACAAACGCAGCGCCCAGTGATGAACCTCATGCATGCCGGATTCAGCGGCGGCGCTGTGACAGGCGCGTTCGCTGCCGGCGGACTGTTACAGACAGGATGGATCTATGCGCATGTGCTCTGGCTGCTCGCTGCGTTCTGCGCTATCGCCCTGCTGGCAACATTGCCCGTGCGCTATCCGCCTGCTGCACCCACGCACACCACCCACAATGGAGCAGGCGCGGCGTTGCGCCTTTTGATCGACCGACGCGCGCTGCTTGCGTTTGCGGTGTTGAGTATGTTTGGCGTCGTGGGGGAAAGCGTCGCCAACACCTGGTCGGTCATCTACCTGCGCGACCTTGGCGCAGCGGCATTTGTCGGGGGTACTGCATATGCGCTCTTTAACGGAACGATGTTTGTTGGAAGGCTGACAAACGCACCATTTGTTGCGCGGTTTGGCGCGCGCACATCGCTGCTCACATCGGGTACGCTTGTGATCATTGCCGGGCTGTTGCTGATCATCCCCGACTCCATTCCGGCTGCGGTGGCTGCCTTTGCGCTTGCCGGTCTGGGAGTCGCCGGCGTCGTGCCGACGGCGCTCAGCGAGGCGGCGCGACATGCTCCTGGCAGCAGCGGCGCAGTGACCGGCGCAATCATGGCAGTGACATACCTTTCCTTTGTCGTGTGTGCGCCGCTTATCGGCTGGATAGCGGAACTGGTCTCGCTTCAAACGGCGCTGCTGACGGTTGCGCTCAGCGGCATAGGCATCGTTGGGCTGGCGCGCGGCATCGCTCGATGACAGGAACGCACAGAAACGATTTCTCGTGTACAATGCAGCCATGATGACTCGTTGTCTCCGCTTCGTGAGTGCGCTGCTCGTCGTCGTGCTGGCGGGATGCGGCAACCTGCCCGTTCCGTTGGGTTCGATGTCGACCACAACGCCCACCCCTCTTCCAACAGCGACGTCGCAGCCAACGGTCGCGCCAACCGACACACCACGCCCGACGCCTCCTGCAACGGCAACGCCAACCCTTGCCCCCACTGCAACGCCGACAGTCACGCCATACCCGCTCCTGCCCACCCCCACGCTTGCGCCGCTAAGCGCAAACGAGCGTCAGGCGGTTTTCGAAGATGTCTGGACACTGGTGCGCGACCGGTATGTGTACGAGGACTATGGCGGCGTCGATTGGGACGCGGTGCGTGCTGAATTTGAGCCGCGCATTGCCCGCGCCGCTTCGGAAGCGGAGTTCTATGCGCTTATCGAAGAAATGATCGGGCGGCTTGGCGATGATCATACGCGCTTCGACACGCCCCAGGAAGTAGCGGAAGAAGCAGCGCGTTTCGACGGCGGCGTGGCATATGCCGGCATTGGCGCCATGATCCGCGATCTGGAAGAAGGGATTCTGATCACCCGTCTCGCTCCTGGCGGACCGGCGGAGCAGGCAGGGCTTCAGCCGCGCGACCTGATCATTGCCGTCAATGGCGTGCCGGTCAGCGACACCATCACCTTTGGTCCTGGCGGTCCGGTCTCGGTGGTGCGCGGACAACCCGGAACGCCGGTGCAACTCCGGATCATCGACGCCGCCGGCGCCACACGCGATGTGACGGTCATTCGCCAGATCATCCCTCCCGATGCATTCCCGATTGTCGAGGCGCGCCGCGTGCCGGGAACCGATATTGGCGTGGTGCTGATCGATACATTCAATGTCTCAGCGCTCGATGAGCGCGTAACCGACGCCATTATGTCGCTCTATCAATCTGGTCCGCTTGATGGGCTGATTCTGGATGTGCGCACCAACGGCGGGGGACGCCTCGATATGCTGCGGCGCACGCTTGGATTGTTCCTCGATGGGGGGACAATCGGCAGCAGCAGCGGACGCGAGCGATCATTCAGCATCGACGTGCCTTCTGGCAAGACGTTGCCACTGCTCGAGCAGATGCCGATTGTGGTATTGACCAGTGATGAAACCGCCAGCGCCGCCGAAATGTTTGCAGCCGGCTTGCAATTCCGTGGACGGGCGCGAGTGGTCGGTACGCCAAGCGCGGGCAATACCGAGAATCTGATCGGGTATGATCTCGATGACGGTTCACGCTTCTGGCTGGCAGAACTGGTCTTCCGCCTGCCTGATGGATCGTTGCTCGAAGGGCGCGGCGTCCAGCCGGATCGGATCGTCGAGATTGACTGGTGGCGCTACGCATTCGAGGACGATCCGCAGATACATGCAGCGGTCGAGGAACTCCAGCTTGTCGGTCGATCAAATGACGTTGCAGAGGTGGTCGAACGTTGAACGCTGGAAAGGCAAGGGGCAGAGACGGGATGGGCGAAAGCGGCGCGCGGAACATATCAATCCCTGTCTCCTGACCCTTAACCCCTGACCCGCGACCTGGTTCTCATACTCATGCGCGGTCATTCGCACAACACTGCCGGGGCGCTGCGGGCTAAAGCCCATAACGCGCTGTGGAACGACACGCTGGTAAAAATTCATTCGCACAACACTGCCGGGGCGCTGCGGGCTAAAGCCCTCGCTAAGGACATGAAAGCCCCGCTGGGGCTTGCGAACCGGTCGCTCGAACATCTTGTCTGGCTGACCGCAAGTTCGTATCAGTTCTCGGTTCTCGGTTCTCAGTTCTCGGTTCTTACACCATGGATACAATGCTCAACCGCATTCTGGCGCACAAACGCATCGAAGTCGAGCGACAGCGCATCAAGACGCCATACGATCAAATGCGCACCCGTGCTGAAACGGCGCCGCCGCCGCGCGACTTTGGCGCTGCGCTGCGCGCCCATCATCCTATCGCGCTGATTGCCGAAGTCAAAAAAGCGTCACCGTCGAAAGGGGTGCTAATCGAAAACTTCGATCCACTGGCGCTGGCGCGGACCTACGCTAGTAACGGCGCCGCCGCCATCTCGGTGTTGACCGACGTCCGCTTCTTCCAGGGTCATCTGAAGTACATAGAAGGAATCCGCGCCCTGTTCGACCGGGGCGCTGCGCCACCGTTGCCGCTGCTGCGCAAAGACTTCATGATCGACCCCTATCAGATCGTGGAAGCGCGCGCCTACGGCGCCGACGCCGTGCTGCTGATCGTCGCCGCGCTCGACGATGAGACGCTGGCGGCGTTGCTGGCGCTGGCCGGCGACCTTGGTATGCAGGCGCTCGTCGAAGTTCACAATGCAGACGAACTCCGCCGCGCCCTGGCGGTTGGCGCGCGCATCATTGGCGTCAACAACCGCGATTTGCACAGTTTCACAACGACCCTGGAAACCACGCGCCACCTTGCGGCGCTTCTTCCGTCAGAAAACCGACCGCTACTGGTCAGCGAAAGCGGGATATTCACCGCCGATCACGTTGCGTTGGTGCGCTCCTGGGGCGTCGATGCCGTCCTCGTTGGCGAGGCGCTGGTCACTGCTCCCGATATTGCCGGCAAAGTGCGTGAACTGGGAGGACGCCTGTGAGATGTCCAGGTTGCGACGGGTTGATCGAGGAATCGGATGTGCCGTTTTGCCCGTTTTGTGGCATGCAAATCCGTGTTTCAAGCGCCGGCAAGCCGACACAGCGCACCAGCCTGGTTATCGACACACCACCTCCCACTCCATTTATTCAATCCTTCATTTCCTAGGGAGACGGCATCGTATGCGCCGGATGGTTACGAAACATCCGTACCGCCGATCAGCATGGCAGCCATCGTCAGTCTGGTGTTCGACATTCTTGGCTGGTTTACGGCGCCGGTCATCTGTTCGATCATCGCCATTGTAGCAGGACACCGCGCGCACCGTGAGATTGCCGCGTCGAACGGGCGGCTCGGCGGAAGCGGACGCGCAAAAGCCGGGATGATTATGGGGTATATTCAACTGGCGTTGGTTGCATTTTTGTGCATTCTCTTCTTTGTCATCCTCCTGCTGACAGGGATAGCCGGCACAGGACCACGATGACCGACCTGCACAATCTCTGTTTTCTGACCGCCGTTGAGCTGATGCAACGGATCCGCACCCACGAGGTGTCGTGCGTTGAGGTAATGGAAGCGCACCTGCGCCAGATCGAACGCACAAATCCGCAGGTCAATGCGATCATTACCCTGCTGCCGGAGCAGGCGCTCGAACGGGCGCGCGCCGCCGATACCGCCCTGCATCGCGGCGATGAAGTCGGTCCCTTGCACGGGCTGCCGGTGGCGCACAAGGACCTGGTGCAGACGAAAGGCGTGCGCACGACCTTCGGCTCACCGATCTATGCCGATTTTGTTCCCGATGTCGATGACCTGATTGTGATTCGTCTGCGCAAGGCAGGCGCGATCATGATCGGTAAGACCAACACACCTGAGTTTGGCGCCGGTTCTCAGACATTCAACCCGATCTTTGGCGCAACCCGCAATCCCTACGACCTCTCGAAGACCTGCGGCGGCAGCAGTGGCGGCGCAGCCGTCGCCCTGGCGTGCGGCATGATCCCGATTGCCGATGGCAGCGATACCGGCGGTTCGCTACGCAACCCGGCGAGTTTCTGCAATGTGGTCGGCTTCCGTCCGTCGCCGGGGCGCGTGCCATCCTGCTCAGATCGCGCCGCCTGGCAAACCCTCAGTGTGCTGGGTCCGATGGCGCGCACCGTTGCAGACACTGCGCTGATGCTCAGCGCAATTGCGGGACCACATCCCTGCTCACCGATTGCGCTCCAGAAACCGGGGGCGCACTTTCGGCAGCCGCTCGAACGCGACTTCCGCGGCGTGCGGGTGGCGTGGAGCCGTACCCTCGGTGGATTGCCTGTTGATCCGCAGGTGACCGCCGTGCTCGAAGAGGCGCGTCCGGCGCTCGAAGCAATTGGCTGCATCGTCGAGGAGGTCGAGCCGGATTTCAGCGGCGCTGACGAAGCGTTCAGGGTATGGCGCGCATGGAGTTATGAACAAAGCCTGGGCGAACTCGCCGACACGCACCGTGACCGTCTCAAGGAAACGATTCTTGGGGAGATCGAACGGGGACGTGCGCTGACAGGACCGCAGATCGGATACGCCGAACGGTTGCGTACCGCGCTCTACCATCGGATGCGCAGATTCATGAAAACTTACGAATTCCTGGCGTTGCCAACCGTCCAGGTTCCGCCATTTCCTGTCGAGCAGCCGTATGTGACGGAGATCAGCGGCGTCCCGATGGAAACCTACATCGACTGGATGCGGTCGTGTTATTTTATTTCAATCACCAGCCTCCCGGCGATTTCCGTTCCTGCCGGATTCACGCGCGACGGCTTGCCGGTAGGGTTGCAACTGGTCGGGCGCTACCGCAACGACTTCGGCGTGCTGCAACTGGCGCATGCCTTCGAGCAGGCGACCGGTCACTGGCGGCGACGCCCGCCGATTGTTGAAATGGGACACGGATGAGCACGGATTGGGACGGATTAACGCGGATGATGAATTATACCAATCACGATTGAAGATGCCGCATGCTTGTCATTCCGAGCGCAGCGAGGAATCTGCGCGGGTTGCGCACGACCCCTCGCGCTGCTCGGAGTGACAATACCGGATGGTCACAGGTAATGGGTATTAATCCGTGCTGATCCGTCACATCCGCGCCGAACCGTGGGCTATCTGGAATGGGACACGGATGAGCACGGATTGGGACACCCCCGCCAACCGCGCCCATCCCGCACCTGACGGGGCGAAAGGTGAAGGTTATGCGAGGAGACGGGCTGTTTGTGCTCCACGCAGAACCACAGCATGATACAATAATCTTACATTTCTTTGTTCGATCATCAGGAGTAAGAGATGGATACCGCGACAATTTCCTCGAAGTATCAGGTAGTCATACCGCGCGCCATCCGCGAGAAGTGGAACGTCAAACCGGGACAAAAGGTGCGCTTCATCGTATACGGCAACCGTCTGGAAATTGTGCCTGTGCGAGACCTCAAGACCGCGCGCGGATTTCTCAGAGGCATGAGCAGTGACATTGAACGTGAAGAGGAAGATCGAGCATGAACGTGGTTGACTCGTCCGGCTAGCTGGAATATTTTACCGATGGCAGGAATGTAGACTTCTTTGCGCCTGTTATCGAAAAACCCGAAGCTGTGCTGGTTCCGACCATCAGCCTGTTCGAGGTCTTCAAGCGCGTCCTGCTGGAAAGAAACAAGGACGATGCCCTGGAAGCGGTTGCCTTGATGAAAGGGGGGAAGGTGGTAGACCTGGACGACAGCCTGGCACTGCTTGCAGCAGAGATCTCCTATACTCTTCAGTTGCCAATGGCGGACGGCATTATTCTGGCTACTGCTCGCGCCTATAATGCTGTATTGTGGACCCAAGACGCACACTTCGAGGGTCTGGATGGCGTGCAATATATCGAGAAAAGGACAACAATGTGAGCACGCCGGTGTGGCAACGCTACTTCGCCACCATCAGGATCGCATGTCAAATCGTCATCCACCACCCGTCGGTGACGGTCACCTCCACCAACGGAGACCAGGAATAAAGTCTCATTGCTATTCTGACATCCCTGGAAAAACATCTTGCGGCATCATGTGCGCTTTACTGCACGGCGCGTAAAAGAGGAGCAAAACCTACACCACCGGCAAGCCAGCCGCCACCTGCGCCATCACCGGTGGGCGCTGCATTAGCGCAGCGTACCGCTGCACGGTTGAACGGGGAACCTCGATGCGCAGCACATCAACCGGAGCGGGAATGTCCAGATACGCGCGCAGAGTGGCACGCAATGCTCCTCGATCAAGCGGGAGGGAAAGATAGCCATCGGCGCCGAGTGCAGCGGCGAGAAGTTCGAGATCGGGACGGGGCGAGAGGAAGATGACCGGAATAGAACGCATTGCCTGATCGGAGCGCAGAAAGAAGTAGATATGCGGGTTGTCGAGCGTGCTGGTCAATTCAAAGAGCACCACATCCGGCATCGCCTGCCGCACTGCCTGACGGAACGCATCGTTGAGCCGCGAGCCAGGAAAGGGGATCAGGAGATGACCGCACGAGGTCGCTTCCTCGCGCACCAGACGCACTAACGAAACTGTATCCGACAGGCAAACCACGCGAGCCATAGGCTTCTCCCCTTGCAACTCCACTCTGATTAAGAACAATGCAGCCATGCGCCGAAAAGATACGGCATTTGTGCAGCGAATGCGCCCATCCTGTGATGCGTCGTCGTAATCGGGTAAAAAGAATGAAATCAGATTGAGGGTAGGGGGTAGGGGTTAGAGCAATGAACTTAACCCATAATACCAATGACGATTGAAGATGCCGCATGCGTGTCATTCCGAGCCCTTCGCTTCGCTCAGGGTAAACTCAGCGAGGAATCCGAGCGGGTTCGCGCAAGACCCCTCGCGCTGCTCGGGGTGACCATGCCGGATGGTCACAGGGAATTGGTATAACCCATTCGTCATAACTGAAGCGGTGGAGAATGCGGGATCAGGCGGGTGTTTCTTGCGAAGCCGTTTGACGACACCGAGGTCTCGATTGTCAGGCGCGGACACGTATTTGATGGGGTCGGCGGCCTCGCCGCGGCGCCAGGCCTGGGTAACGTGGTAGAGGCCACGAAAGACCATCTCGCGCGAAATCTGGTCAACGGGCCGCATGCGTTCTTCGGCAACGGCATCGCCCACCTCAACCAGGAGCGCGAAGAACAGCCAGGTCGCCCAAACGGGCAGGAGCATCCCGTGCAGGGAACCTGTCCACCGAATCGGGACGGAAAGACTCGCTCAACAGGCCGAGTGAGTGAAGGGTCTGAATCCACTGGCAGTCGAGGACATCGGTCTTATGGCGTGCGGGGATCTGACGGGCGACGTTGCCCTGATCAGGCAGCAATGGAGGCTGCGTTGCTCCAGCACCTCGAACGAGGGGTTCCAATAAACACCCGTGGATTCCATCGCTATCGTCTGGATGCCGTTCTCGACGAGCCACTGGGCGAGCGCTGCAGGTCGGCGGTGTAGGCGCCAAAGGAGCGCACGATGTGCGTGCGCTCGGGGCCGGGGAGGCAAACGTACATCTGCTCCGCGCCGATGTCGGCGCCTGCGGCGTGGGGGTTGACGATGGGCAAGCCGTCGGTGGAGCGGATCTCGCCCTGGGCGAGGGACTGGGAGTTCGATTGAGCGCGAGCCATCGCAGACCTCCTGAGAGAGCAATCGTCAGGCCCGGACACCAGAAGTAGGGGCAAAGCGCCGCTTTGCCCCTACTCATCGGGGTCGCTCGAGGCGCCACCAAAGAAGAAATCATCGTGGCCGGAAACCAGGGTGCAGCTCGGGTCGGGCGGTGAGCCCGAACACCGGCGCGCAAGTACGGCTTGCGTGCCTGACGATGTTGAGTATACTGGAAATGTGCGGCTGTTTCATCCGGTGGGAGGGCAGGCCGCGCCTGCCAGGGAGAGGTGCAGGAGAGTCAAGATTTTTTGGCGGAATTCGCCCAACCCAGAAGCGAAAGAAGTCTCAGCGATCGCTGCGGTGCGTTTGACCTTTTTGCACAGAGTCAAAAGGAGGGGTTCCCCCTGATAAAAAACAAAAAAACGCTGAGGGGGTAGCTGCTCCTTGTTACGGAATAGGGTCGGGAAAGTCCAGGGGAGAGCGGACGGCGAGGCTACCGCGTTGAAGGACATGGTGGAGATCATGGTCGTCGTGACATCCGTATGACCCAGGAGTTCCTGCACAGTCCGGATGTCATATCCGTCCTCCGGGAGATGGGTAGCGGGAATGGCGCAGCGTGTGCGGGGTGACCGGCTTTGTCAGGCCAGCGGCTCGGGCTGCGTGACGCACCGCCCGCTGAAGCATTGCCAGGTCCATGGGGTGACGGCAGATCGCGCCTGAGCGGGGGTCGGCGGAGCGGCGAGGAGAGGGGAACATCCACTGCCATGCCCACTCCCGCTCCGCGTGGGGATACGTGCGGGCCAGCGCGTCGGGCAGGGAGACGGCGCCGTATCCCTGTGCCAGATCCCCCTCATGCTGCTGGCGGACCTGCTCGAGATGGGCCTGGAGGGGCTGGACGAGGGAAGTCGGCAGGACCGTCACGCGATCGTTCTCTCCCTTCCCATCGCGCACGGTGATGGTCTGATAGGGGAAATCGAGGTCTTTGACGCGCAGTCGGAGGCACTCCATAAGGCGGAGTCCGCTGCCGTAGAGCAGGCGCACCATCAGCAGGCGGGCGCCGGAGAGGTGGGCGAAGAGCTGCTGGACCTCCTGGCGGGTGAGCACGGTAGGGATGCGTTTGGGCTTCTTGGCGCGGAGGGCGTGGATGGGCTCCTCGACGGGTTGGCGGAGCACTTCACGATAGAGGAAGAGGATGGACTGAAGGGCCTGATTCTGTGTGCTGGCGGCCACGTTCTCCTTGACAGCCAGGCGGGTGAGGAACGCCTCGATCTCGGGGGCGCCCATCTCGGCGGGGTGGCGCTTGTTGTGGAAGAAGATAAAGCGCTTGATCCAATGGACGTAGGCCTGCTCCGTGCGATAGGAGGAGTGCTTTCTGCGCAGCGTCTGTCGTACGCGGTCCAGCAACCGTGGTGGCCGGAGCTCGGGTTCTCACGAATCAGATATTGACATGACATGGTGCTCACGTTGCGCGAAAATAGCAAGCGATGTGGGTCGTTTGTCTTAAAAAGTCAAACCCACGGGGGATGATGCGGACTCCGCATAACCTTCCCATAGAGGGGGCAAAAACGGAGTCTGTATCATCAATCGTTGGGCCGTCTCGTCCGCAAAAACAGGCGTTGAGTTGTTGAAGGCTGCTCGTCATGTTGCAGCTCGGCCACAGCGCGCTGGCCGCACACGGCAAAGGTGGTCAGTGGCGCAGGCAACGGAGAGACAGAGCAGCACCGTCTCGGTTAGGGCGCCCGACAAGGCGGCGCGGGGTCGGTGGGGCAAAGCGCTCGCGAAGGGCGGCGGCCCGGGTGGGCAGTGGTCAGTTGTCGGACAGCGGCGGGCGATGACGAGCGCAGTCGGGGTGCAGCAAGGTGATGCGCAGCGTTGAGCATGGTCGGTCGGGGAACGGTGCTATCCAATCACAGCGTGCCGGCGCGGACAGGTCTTTGCAGGGTCAGGCTCGCTCCGGTGGCACAGGCGGCGTGGTGCAGTGGTCAGTCGACGCAGGCCGGCGCCCTGCCCAACACTGCATCCAGCCGACACGCTCCGCTTCGCTCCGCGTGCGGCTGATGCTCTCGTTGGGCGGGCGCATGCCAAGCCATCAAGGTTGCAGCAAAACAAGGAGAAGAGATAATGCAAACGGTAACAGTTCCTGAAATCGTTGAACATTTGCAAAGACTTTCGCCCGAGAAACTTGTCGTTGTCTACGATTTCGTTTCTTACTTGCTCGAACGCGAGACGGGACAAACGTTAAGCCGAACAGCATCCGAAGCCTTCCAGCCCATGTTGGCTTCTGAACCTGTTCTGCGGCGTGATTGGGAACGCCCTGAAGAGGATCTCGCATGGGCAAATTTGTAAAAGGAGACGTGGTCGTTGTCCCGTTTCCCTTTTCCGATTTGAGTGCTGCTAAAAGACGTCCCGCGTTGGTGGTTGCTACACTTACCGGGGATGATGTGATCTTGTGTCAGATTACGAGCAAAGCAATCACCGATAATGACGCGCTTGCCATTTCAGACAGCGATTTCACGAGTGGCGGTTTGCGTCAAGACAGCAATGTTCGACCCAATCGTATCTTTACCGCCGATTCGAATATCGTTCTGTATCGTGCCGGTGTGTTGTCTCCTAAGAAAGTGCAGGAAGTCATCGCAAAGATTATCCAGATAATTAGTGCCTGAGAAAGAGAAAAGCCCGCCCAACAAGCGCTTCCAGCCGATCGCTTCGCTCGGTGCGCTCGCTCGCGGCGGCTGATGCGCGTGCCGTTGGGCGGCATACGCTGCAAAGTTGAGAGAACAGGCGCATTACAAGGAACGAATGTTTGAATCAAGAGATGGATAATCTATGCCGACCGCCCTACGCGTGGGTCCGTATCGTTTCTACTTTTACTCGTACGACTGTGGCGAACCTCGTCATATGCACGTAGACCGTGAGAGCAAGAGTGCAAAGTTTTGGCTTGACCCCGATGTGGCATTGGCTGAAAATCATGGCTTATAATCGAAAAGAGTTGCGTGACCTTGAACATATCGCGCGAGAAAATCTGGAGAGATTAAGACATGAATGGGACGCCTTCTGCAGTGGTAACCCTGACCCTACCTAGGATCATCCATGTTTTGGTGACAGATGATACGCTGTCAGTGGATTTGGAAGATGGGCGCACGATTTCTGTGCCGATTGGGTGGTATCCGCGTTTGGCGCATGGAACACCTGAAGAACGTGCCCATTTCCAGATTAGCGGTGCTGGATACGGCATCCATTGGCCTGATCTTGATGAAGACATTGGTATTGAAGGTTTAGTGCTAGGGAAAAGGTCAACGGAAAGCCCAGCATCTTTTGAGCGATGGCTTCAGCAACATAAGAAACAGGGGTAAATGCCGCCCAACACGCGCATCCACCTGACGACTTCGCCGCTGCGCGGCTCACCGCAGGTGATGCGCAGTCCGTTGGGCGGCTGTCACTTGCTCAGCGTTGCTAGGCTCTGTCTGACTATCCGGCAACGGTGGGAGCCATCTGGTATACTACCAGGTTGATTATTGTCAATCTGCGAGGATACCAGATGCGCCGCTACGAGTTGAGTAATGCCCAGTTTGCCTTGCTGGAGCCCTATCTTCCGAAGAATGGCTCGGTCGGTCATCCCTGGGCTGACCACCGTCGGATCTTGAACGGCCTGTTCTGGAAGCTGCGCTCAGGTGCGCCCTGGCGTGATATTCCCGACCGCTATGGCCCCTGGCAGACGATCTATGACCGCTACGTGTTCTGGCGTCGCAACGGTACCTGGGAGCGCATCTTGCGCGCCCTGCAAGTCGAGCTCGACGCGCACGGCGAGATTGATTGGAGCTAG

Protein sequences of DBSCAN-SWA_1

>NC_009767|3648895:3720111|3710884_3711694_+|WP_012121351.1|DBSCAN-SWA
MDTMLNRILAHKRIEVERQRIKTPYDQMRTRAETAPPPRDFGAALRAHHPIALIAEVKKASPSKGVLIENFDPLALARTYASNGAAAISVLTDVRFFQGHLKYIEGIRALFDRGAAPPLPLLRKDFMIDPYQIVEARAYGADAVLLIVAALDDETLAALLALAGDLGMQALVEVHNADELRRALAVGARIIGVNNRDLHSFTTTLETTRHLAALLPSENRPLLVSESGIFTADHVALVRSWGVDAVLVGEALVTAPDIAGKVRELGGRL
>NC_009767|3648895:3720111|3659527_3659968_-|WP_012121317.1|tail|DBSCAN-SWA
MTDKDPLISAWFGVDFGDGVVGAFRECTGLGSENEVVESKASGPDGKYIIKKIPGRMKWNNVTLKRGITDAMDMWKWRKMVEEGDIQGARRNGTITMFNTKGEPVARWKFVNAWPSKLTGPDANATNNEVAIETLEIVHEGYERVQ
>NC_009767|3648895:3720111|3681258_3682377_-|WP_012121335.1|DBSCAN-SWA
MLPGRAMNNGIAVDLRNVVKRFADVCAVDHVSMQIRDGEFFSMLGPSGCGKTTTLRMIAGFEFPTSGEIFLHGKSVGTTPPFRRNVNTVFQSYALFPHMTVAENVAFGLRMKKTPPADMSRRVTEALELVRLGDYAARRPRQLSGGQQQRVALARALVNHPEVLLLDEPLGALDLKLRKEMQLELKSLQERVGITFIYVTHDQEEALTMSDRIAVMNAGKVLQIGTPTEIYERPVCRFVADFIGETNFIEGKVESVESGGIATIVSDDGLTMRGQMIRPVPPATNVTLSIRPEKAFLSVQPPPPGTPNCHQVRVERVAYIGSDTRIDVRLGARLFDLWEQNSRSTLDRDAYWQPGETGYLWWPAENAIILTE
>NC_009767|3648895:3720111|3661564_3662527_-|WP_012121319.1|DBSCAN-SWA
MIADVHLAIRHMILNRGLIPADEVDVRFERPTKEWVSSLVRPTINLYLFDIDENVDLRQTNMPVMRGGGSASYRMPMRRFDLRYMVTVFATVAADEHLLIYRVLATLLRFPSLPPSSLAAAMAVIAGREGYVAEEARFMALAGAGERTTLRDLRSALASAEIGSAARAAMMALVDEPQVTTKIATAEESLRLLDVWNALEQAPRASLLYVVTVPVDLDIVIDSPLVLTRTLRVRQRTDAAASTELLRIGGTVRDHAGAPLSGVTVAIEGGAIETVTDSEGRYALSHIPLGEVTLRVTRPDGSVHIATFATPSDSYDILLD
>NC_009767|3648895:3720111|3709079_3710528_+|WP_012121350.1|DBSCAN-SWA
MMTRCLRFVSALLVVVLAGCGNLPVPLGSMSTTTPTPLPTATSQPTVAPTDTPRPTPPATATPTLAPTATPTVTPYPLLPTPTLAPLSANERQAVFEDVWTLVRDRYVYEDYGGVDWDAVRAEFEPRIARAASEAEFYALIEEMIGRLGDDHTRFDTPQEVAEEAARFDGGVAYAGIGAMIRDLEEGILITRLAPGGPAEQAGLQPRDLIIAVNGVPVSDTITFGPGGPVSVVRGQPGTPVQLRIIDAAGATRDVTVIRQIIPPDAFPIVEARRVPGTDIGVVLIDTFNVSALDERVTDAIMSLYQSGPLDGLILDVRTNGGGRLDMLRRTLGLFLDGGTIGSSSGRERSFSIDVPSGKTLPLLEQMPIVVLTSDETASAAEMFAAGLQFRGRARVVGTPSAGNTENLIGYDLDDGSRFWLAELVFRLPDGSLLEGRGVQPDRIVEIDWWRYAFEDDPQIHAAVEELQLVGRSNDVAEVVER
>NC_009767|3648895:3720111|3658755_3659124_-|WP_012121316.1|DBSCAN-SWA
MLQTEFSFVLPCGYVDEQGNLHREGSMRRATAIDEIEPLEDSRVQRNEAYLSILLLSRVITRLGTIGVITPAIVERLFATDFLYLQDLYIQINAAAPHLVETQCPACGARFAIDVGVHEKTG
>NC_009767|3648895:3720111|3692384_3693503_+|WP_012121342.1|DBSCAN-SWA
MHDTVVRFGVVGAGSVAVRGLLPHLSQPDMRDRVRLVAVCDPAPGRAAAAAARFGCEHAFTDYDDMLAAGVVDAITIATPIGLHYEQGRKALDAGLHVHFNKTMTTTVAEASDLIERAAVRGLKIVASPGEMLRPHNQRIKQLIAEGAIGTLCWAACGAAFGRYHEEESVRHGADPLTNIDPTWYYHKPGGGPLYDMTVYSLHALTGILGPARRVTALSGVRVRIREFRGAWHPVDADDNTLILIDFGDNLFALAYGTPAGTLTEGFSGSYFGTTGSIIGRKLNGQPFDYPGRADAEAHPHGDQILLPHVVGAHCEIEEQHVWEDIMQLIDWIRDGIPSIVTAEHARHVIEIIEAAYRAAETGQTRELHTTF
>NC_009767|3648895:3720111|3693872_3694718_-|WP_012121343.1|DBSCAN-SWA
MKLKHLIEPGDPERIAGGFEFTEGPVWHPDGFLIFSDIPANRQYRWHPTEGVSVWREPSGNSNGLTLDRQGYIIACEHGGRRVSRAKPGAEPVTLADRYDGKRLNSPNDVVVKSDGTIYFTDPPYGIAPEDREQPCNGVYRILPDGSIELLVDDFDRPNGLAFSPDETILYIDDSPRRHVRAFDVLPDGRLANSRIFADMDHPQPGSPDGMKVDREGNLYVTGATGVWVFEPDGTLLGVIVTPERPANCAWGDTDRQTLYITARTSLYRVRTRVPGIPVPR
>NC_009767|3648895:3720111|3718409_3718634_+|WP_041330866.1|DBSCAN-SWA
MQTVTVPEIVEHLQRLSPEKLVVVYDFVSYLLERETGQTLSRTASEAFQPMLASEPVLRRDWERPEEDLAWANL
>NC_009767|3648895:3720111|3690306_3692166_+|WP_012121341.1|DBSCAN-SWA
METSVMEVPAYVTNEKLIRWVQEMVDLCKPDRVHWCDGSKAEYDALCEQLVQSGTFTRLNQEKWPGCFLARSDPSDVARVEDRTFICSVSRNDAGPTNNWMAPREMKETLIPLFDGSMRGRTMYVIPFCMGPIGSPLAQIGVELTDSAYVVVNMWIMTRIGKKVIEALGNNDFVPCLHSVGAPLAPGQKDVPWPCNPTVKYIVHFPEERMIWSYGSGYGGNALLGKKCLALRIASVIARDEGWLAEHMLILGVKDPKGRKTYVAAAFPSACGKTNFAMLIPPKPFQEEGWEVTTVGDDIAWIKPGPDGRLYAINPESGYFGVAPGTSYDTNPNAMVALSRNTIFTNVALTPDGGVWWEGMTKEPPPEAIDWQGKHWTPDSGRKAAHPNARFTAPAAQNPAIDPDWENPQGVPIRAFIFGGRRSMVVPLVYQSFNWTFGVYLAATMGSEMTAAAFGKIGEVRRDPMAMLPFCGYHMGDYFNHWLQFGRTIPNPPRIFSVNWFRKDAEGNFLWPGFGENMRVLKWIVERANGRAVGIESPIGWMPRYDDIDWRGLENFSEEKFTELMAVDRDQWSQEILLHEELFLKLYDRLPKEFRSVRDLLLSALWRSPEHWDLLDGGH
>NC_009767|3648895:3720111|3662969_3664211_-|WP_083760372.1|DBSCAN-SWA
MQSPPSSGLQSGGRRMISYGSQGPDVADAQQLLNQHGAAPPLAVDGIFGPKTRQATIAFQKSRGLAPDGIIGPLTWGALESGAPGPQPPGPQPQPPGPQPQPVERWTNEDRLMVAAHIQPGVLTAHQASRIEPAVMALSDDEYTAFRALLQSAGSSMERAFLCKALAASRSLSDIADFAATIRGLSDNWLLRNLNVVDLNEADGVERGIIQQYGNSCGPTSVQVIRASADPIYALALRSAGPIEQASEHAVSAPDTIPNQMLAGEQKAILDTHAAAGTGNPATDRTQPTGGAWVEAEMNALSGATGVTYQTQIVGTQMTLDAALDVLRTNLAAGIFVPIVVGGSVGDTAHYVMAMAISGNRIQIHDVATGDTVWRTEQDFKASTLNLPSGHTMLTAIDVPSAVPTAQPQPATP
>NC_009767|3648895:3720111|3703854_3704754_+|WP_041330855.1|DBSCAN-SWA
MAVTSRLYAGEDDYARMRQLLAEIEALEGPLVYCHVGDLDWWRFTDEDTHALATRIRLWFDHQGALVGFTWPSEHQVDLLVHPAYRAIEPAMLDWVEHLSRLDVDDPKPHVSVWSYEHDAYRNNLLMQRGYVRTDHFLSLSTRDLHEHVPEPEAPAGYTIRHVQGEADVHARVEAHRDAFASSRMSVAKYRAAIHAPTYRPDLDLIAVADDGSVAAFCTLWFDSINRIGEIEPLGCRAAHRRHGLARALVLEGLRRLQGYDAHLATVFYGSEPEDQPARQFYASLGFIERGRMYAWKRG
>NC_009767|3648895:3720111|3707848_3709039_+|WP_041330856.1|DBSCAN-SWA
MEPKTLANRLSAASIAWRPGIAMALLMGYFVLFGMTVGGQGVLWADIIHTLRISEGAFGSVQLLPPLIAMGLLVLGGPLTVRFGKKRLAITGLIVLGLSSLGLAAASDFLSFSIALALSGLGFGAVEMAMNSATLDWEQQTQRPVMNLMHAGFSGGAVTGAFAAGGLLQTGWIYAHVLWLLAAFCAIALLATLPVRYPPAAPTHTTHNGAGAALRLLIDRRALLAFAVLSMFGVVGESVANTWSVIYLRDLGAAAFVGGTAYALFNGTMFVGRLTNAPFVARFGARTSLLTSGTLVIIAGLLLIIPDSIPAAVAAFALAGLGVAGVVPTALSEAARHAPGSSGAVTGAIMAVTYLSFVVCAPLIGWIAELVSLQTALLTVALSGIGIVGLARGIAR
>NC_009767|3648895:3720111|3703517_3703802_+|WP_049768839.1|DBSCAN-SWA
MWRSLCPTRRFEIIDNNLSRFLVSDSTIIERDQQRSVTAATVAPAPVVGALEVEVETRYNRLEVRTVGDETAALASELLSPANKRSGADAADEA
>NC_009767|3648895:3720111|3679326_3680187_-|WP_012121333.1|DBSCAN-SWA
MIDAQTTQSLRVVGGERRRSLGSLALGMHTVLTLAFLYAPIVVLVLFSFTRDSFGVRWTGFTFDWYARLLADQRLLTAAMNTLIVALVSTVVSTIIGTMTALAMERYRFRWRTGFDALLYLPIVIPEIVMALALLAFFAFSFGLLETLFGIRLQFGLATVTIAHIAFTISFVVVVVRASLKGFDMRLEEAAQDLGANEWQTFRYITLPLIMPGVIGGALLAFTLSLDDFVITFFTTGSGVSLLPVEVYGQVKRAITPKINAISTLMLLVSITLVFLSQFVQRRREI
>NC_009767|3648895:3720111|3652550_3652841_-|WP_012121311.1|DBSCAN-SWA
MPPAARVSDMHTCPLSDGPKPHVGGPIMPPGVPTVLIGGLPAAVVGGMATCAGPPDTIIKGSATVLIGGMPAARMGDQTAHGGVIVGGFPQVDIGG
>NC_009767|3648895:3720111|3666635_3667565_-|WP_012121323.1|DBSCAN-SWA
MHERLMIRRQRQAAQQHTATFERAPETMTALPGAGQGHAFGAFTLHHAPSGVPQTKLMVNAPGDVYEQEADRIASQVLRMSDEEVQTSRVAGGIQQMCAECAAQKDEPTSAGAAEEEEDLIQAKEEPGAVPEVTPETQAAIDAMHGGGAPLDRETRAFMEPRFGHDFSQVRIHTDARAATVARSLDALAFTVGNDIAFAPGQYQPGSDEGRALLAHELTHTIQQTGGAARVQRQERAATQTGTAGATTIEDLTDGAISVQGSGALVRINTAMMTIDSGMLRTGGVTQTDTLIANAVIASSYTPGAGNIM
>NC_009767|3648895:3720111|3711730_3712171_+|WP_012121352.1|DBSCAN-SWA
MCRFARFVACKSVFQAPASRHSAPAWLSTHHLPLHLFNPSFPRETASYAPDGYETSVPPISMAAIVSLVFDILGWFTAPVICSIIAIVAGHRAHREIAASNGRLGGSGRAKAGMIMGYIQLALVAFLCILFFVILLLTGIAGTGPR
>NC_009767|3648895:3720111|3650109_3652140_-|WP_012121309.1|plate|DBSCAN-SWA
MPLPTPNLDDRHFQDIVDEAKRLIPRFCPEWTDHNVSDPGVALIELFAWMTDLLLYRVNQVPDKVYITLLNLIGIRLEPPQSAVAPVTFYLSAPQETAITIPADTEVATVRTETSPAVIFTTETDLTIYPAVVADEKVYVRQVERPNVPASWRMHELRQLLLPNGRIAMFAPNPLPHDAFYIPLRHNHSNHVLALVIDCDVARGAGVDPTNPPLIWEVWQGGVARWSPCEVEFDGTGGFNMPGEIVLHLPPMAPDTIQGVTAHWLRCRLTDAQADTPENRHNRYKVSPELLALRIESRGGTVNARHAVTVRNEVIGRSDGTPGQEFHLLNKPVLARNPQRDVLIVDPPLPGRPREWSEVPDFAASGPDDQHYTLDSLSGTVSFGPALLQPDGSVRNFGSVPPHGSVITMTRYQYGGGVIGNVQANTLVTLKTSIPYVSRVTNRRAAEGGRDPQGLDDARARAPQILRTRTRAVTADDYEHLAREVVGVARACCVSPGAQPGGPADPRPGQVIVYILPQSDNPAGRIPPEALTLSAELRARVLDYLDRRRPLGIALDVRPIQYLWVSVEVRLRVPVRSDPALARAVQHEAEEVLYRYLNPYVGGPDGNGWPFGRDLHVSEIYALMQRLPSIEFVEEVQIGLTEPGSTAKPQVVSPRLDVPRHALICSWQHRVSVSAS
>NC_009767|3648895:3720111|3703324_3703552_+|WP_083760315.1|DBSCAN-SWA
MTRRSTCPAPCAPLSTIQSFVEARMHSPFPGTDPYLKSMAIWPDVHAGLIAAMSRQFQPCLSPRYVAVIVPYTAF
>NC_009767|3648895:3720111|3652151_3652544_-|WP_012121310.1|DBSCAN-SWA
MSDFLGVGWAFPVGLDARGRFALARQEVDIEQAIIMILLTPKGQRLMRPTFGCQIHDLIFAPNDAATAGLAVYYVEEALAMWEPRIDVLNVEIDTDPQTPERMLITIEYRIKATHDRRSLVFPFYRIPGE
>NC_009767|3648895:3720111|3713985_3714195_+|WP_012121354.1|DBSCAN-SWA
MDTATISSKYQVVIPRAIREKWNVKPGQKVRFIVYGNRLEIVPVRDLKTARGFLRGMSSDIEREEEDRA
>NC_009767|3648895:3720111|3674567_3674966_-|WP_012121328.1|DBSCAN-SWA
MLALLAPARITLAVEADGTRTLQAQGKGIVKLVGDGSVSIGRGADAVWVKNATRIMTEGKGRRTVLPDGTVRLTGYTGAITLIGEGMEVKVVGGVITIRAEGHGTATLYGAGTYETVAAQGEWVRAGAQVEY
>NC_009767|3648895:3720111|3719371_3719641_+|WP_083760373.1|DBSCAN-SWA
MIHVLVTDDTLSVDLEDGRTISVPIGWYPRLAHGTPEERAHFQISGAGYGIHWPDLDEDIGIEGLVLGKRSTESPASFERWLQQHKKQG
>NC_009767|3648895:3720111|3664723_3666616_-|WP_012121322.1|DBSCAN-SWA
MTSRQTFQFRRFERTANHVSARRESQSDHSAEQGQFRHAFHQAFPGEADQPPPAESETGQEQPQSGAPLDSAVQRILAGDRRVHRTIHQAISAIKARCPDQRRPAQRMSVSEGDVVADVSPAVESDIDAMHGGGAPLDRETRAFMEPRFGHDFSQVHIHADARAATVARSLDALAFTVGNDIAFAPGQYQPGSDEGRALLAHELTHIIQQTGGAARVQRQEAGEGEEEHSGVGDEVQPPVTLTNPRFAPIPALRDIGEGRRTLSTRDNGRPVKAVQTALLDLGYSLLRFHDDGRLGNETRDAVRQFRADRHLAPGVDVDYTVIAVLDRVAPPPGRATEHFVDYERLLADDRLDFSISLGYDEGQSHVSDAESARRWLEGQGFTLSAGSPAEGDERYEMRRDITYPNAQGERVTKNVLVTLRLITPGEGAARRFLETLNETEIMTYVGHARGGLGPDFDDKHSARENVVIGAHSRLHDQPNTSVRTPRDPYWREINSERTNTLEEMTDRGAWDEQRYRVWLFYACTSLNYQDELRGGLLPPSMNRENLDIFGTNKAVPIAAGLEPTFAMIEGILNAQTMEQIVRAMQQRMEDALRAYPNLTSPQLRAALREYSNAFYREGAADNPTAPAVE
>NC_009767|3648895:3720111|3648895_3649924_-|WP_041330837.1|tail|DBSCAN-SWA
MEPDFGKLIIRSPDGEQVVTLRQPQYTIGRNPARDLHLDSPVVSNMHGRIDAGPQGAQLVDLGSTNGTFIGERRLPPNQPYPLVPGEEVRIGPFILIYIPPGVVYPPEEVALPVAEMPEPPSVIEEEPLTAAISGETTEGAVGESAAMATPEAPSAPPSPPPPEEPVVVAQEFPERLPVRYAASSDGLDSRYLRYLPAIFQENEFLGRYLRIFETIWEPLEWRQNHINLYFDPRTCPLSFLPWLAGWLDMEVNPYWPESRIRRLIAEAADLYRWRGTAYGLKRLIEVVTGLTPTITEEPSQPFVFRISLALPPGSDVDARLIDNLVRAHKPAHAGYILDIRQ
>NC_009767|3648895:3720111|3675131_3675551_-|WP_012121329.1|DBSCAN-SWA
MLHYKLIHPQILAALGGAGHGSRVLIADGNYPFATGAPAGAQRVYLNLAPGLLTVTDVLAVLADAIPIESAHVMVPDTAPEPAIFTEFRALLPHLTLQPLGRFAFYDAARAPDTALVIATGEQRVYANILLTIGVVSPA
>NC_009767|3648895:3720111|3680334_3681243_-|WP_012121334.1|DBSCAN-SWA
MAADTLASDSQPREGQIAALLRRSERLQLGLLLFPGLFWLVTFFALPLVVVVLYSFATNGPGGRIEWTFTLNNYRTLFTESLYVNAYWRSIWAGVWTTLICLALGYPLAYSIVRRPPRWRTVLLFLILIPFWTNFLVRTYAWMLILSNNGIINSAIQSLGLPRVALYPSEGAVLIGLIYGSLPFMVLPIYASLARFDFTLMEAAADLGADQVRAFLRVMLPLTMPGVAAGSVLVFIPTVGQFVVSDLLGGAKVDYLGNLLQRLFTRSNPPNWPLGSAMAIVFMIVLTVAIIIYFRVTTEEDR
>NC_009767|3648895:3720111|3694857_3697743_+|WP_012121344.1|DBSCAN-SWA
MTQSVSDPIAELQREIDALRIDRERDLRALNVLRTVSIACLGKPNARAIFEAMHQALLPVFRYDAAYFAVCDPGNRETFRAALLVDEESVEYLEHTPYGPLTGMLVQHRQPLLFYDLLHERTLLTPPPERFGNQQKHSRSWMGTPLLLGYETVGVMSIQSYRPGIYNQDHLDLLQRIGNLLAVALENAALVEQQQTLSNELTERIAARTRELTMLTALAEELAFQRPLSELLDRALSLLVDHLAMSGGAVRLLSSDGAELTLAAAYGFPPAYADQLARIPVASSLMRSVIEERRPLIIDNLAQSEHWQRLGLHYRSLIAVPLQIGDRALGSLLLVDTRQRAIQDQEIEFVRTVGHQIAIGIKTAQLLAERERQVAELSALSDISHAASTTLELRALLRHIARALARFMRADVFSVAVYDAERDVISDGFSIDDGEEHSFWQFQPPPSDSLTAWVLRNQRALRFDNLLDEIGRYPELRLHAIGTDRMALSWLGVPLIGREGQPIGVLTVQAYSPCAFDDRDERFLAAVARQVALHVQNVMLFAAEQEARRTADTLREVARVLSAAFSSGEVLNVILRELKKVIPYDSASIMLREGRVLRAAAVAPEHIATRLDAMDRPLNEPGAAVWVVHHKQPLLIEDVSVSHIWAPKPQISNIQSWIGVPLLVKGEVLGVLNIDSTQKGRFTQRDVEVAQVFADNAAIAIENARLYAESIARREQELEIARRIQSNLFPRELPRRQGIALAARCLPAREVGGDFFDCFALGERRSIAVMIGDASGKSVAGALLMAMARSVGRAEAFDHEEPALVLRETNRSVAHDVPRGTFVALCYATIDPSGRIAVANAGQLTPVLVHADGAIQYLYPPGPTLPLGIQSNIGYETLAIDLAPGDTVVFFTDGLVEAHNATGELFGFERLDALLTKEAGLPPDALIDRIIDEVIAFMGDTVQHDDMTLVVVQFGGERTND
>NC_009767|3648895:3720111|3658126_3658555_-|WP_012121315.1|tail|DBSCAN-SWA
MPTTEEAYPSYRFYVEIAGVPHAVFTEVSGLQVETEITEYEEGGNNDFVHRLPGRTKIGNITLKRGMTSSNELLQWFLKIARGSIDRRNVTVIMYDSAGKELFRWNFIEAYPIKWTGPQFTAASTEAAVETLELTHNGMTVG
>NC_009767|3648895:3720111|3670055_3672029_-|WP_012121325.1|DBSCAN-SWA
MTIISGETWERINHRALETALARVRVALERYLARLNHVSSAASDRLSFLESDSADERSALDTLCATFRLSPFERDLLALCAGVELDAGIATLCAEAQGDPQRVSPTFSLALAALPGAHWSALAPDAPLRYWRLIEPASGGLLTRAPLRIDERVLHYLTGISYLDERLCGLITPIRATEALLPSHQALADRIAAVWRRARGGMFPLIQVCGDDRATRQAIAVAACASVGVTLHTLNAAVMPLAVADVESLIRLWEREAALSAGALLVECDDVDPADTVRASMLTWLLERTGGALMVSARDRWRPTQRVTVTIDVHRTSSREQRNAWRAALGATADHLDGHVDLLVSQFNLSAHAIRAASAEALGRVQEYAGHDVARAVWEASRAQARPRLDDLAQRIEASVAWDDLVLPEPQRRLLRDIAAHVRQRARVYETWGFAARSSRGLGISALFAGASGTGKTMAAEVLANELHLDLYRIDLSSVVSKYIGETEKNLRRIFDAAESGGAILLFDEADALFGKRSEVKDSHDRYANIEVSYLLQRMEAYRGLAILTTNLKSALDAAFLRRIRFVVQFPFPDAAQRAEIWRRSFPPGAPTDGLDFEKLARLNVAGGNIRNIALNAAFLAADAGEPIRMAHLLRAARAEYAKLEKQLTEAEVAGWV
>NC_009767|3648895:3720111|3655320_3658122_-|WP_083760314.1|DBSCAN-SWA
MIHRMLIMRLRRHMRLARALAGRAPLASRAAVDQPILWAIGQAPMTPRRARAAVWLWDLSPMSVPLAGGREPGAGMVAPTPVARGGAPEAPASPEPVAGGREPGAGMVAPTPVARGDAPEAPASPEPVAGGGTVASPAEPVTPDTTLPPSSLPVVSGASHAPDDVNTRAMPVPVDSAPVSAQPEPRTSTRESPSALLSASPEPVAAFDRSPAAWMERLRTDEHRRARRETAALPEPVEDGSGIAPVAPPEPADNAAAAVSAPPAPVEDQGGKAPVARQTPLQESTPAVPSASPEPVAAFDRSPAAWMERLRTDEQRRRDQAVSASAGETTPTPPIVPAPDPAPEPPGVFAPGLPASRGTSEGPDVSAASEDTSSLASRGADVVTTTILTEVSAAPSPAQPEAWSAATKANVSPARQASSVAAPNAGAAPSVTPTPTVAPPSVSAASSIAPSKAGDAPQPADPAAAVVDAARAWVAQRMQECAAASTPQQPAPPPPAAPKSQPQSQAPIEMRVARPPRFVEERAPRPAPPDPAPVAETPQAMDQPPVETPAFDRSVEAWMERLRADEIRRRQKDAAAQAPGGVAEDPRSVDAPPLASVQPVGAIRSSSATETASGSEPRRPVPQPIRAPLPGGTALSGRATRFAPPVSAPARSTALSSARFSAPSAPSLSESNRRFLRAAVGVDPATVRVARGPEAARVAAAYRADAVTFGNDVALAPARGDETAEGLGLLAHELTHVARRRDPTAIPPIVRPPEQRPGLRPAPPGPSTDEEALARTVEAQMTQAARMRFAPPVMPAHTGASTAPPVQASEQVHPAPSSADAPDAPERARWGNLPAPWEPLPDWLAPPRPAVEAPPLPVVTVAPAPPALTAPQQAGAPIVRTAETTRALPAIRRAETTAPAQEASPAPDLDELARQVYAVLKRRLAVERRRSGW
>NC_009767|3648895:3720111|3715463_3715865_-|WP_083760316.1|DBSCAN-SWA
MLLPVWATWLFFALLVEVGDAVAEERMRPVDQISREMVFRGLYHVTQAWRRGEAADPIKYVSAPDNRDLGVVKRLRKKHPPDPAFSTASVMTNGLYQFPVTIRHGHPEQREGSCANPLGFLAEFTLSEAKGSE
>NC_009767|3648895:3720111|3702294_3703170_+|WP_041332052.1|DBSCAN-SWA
MKTHPLTALQVIGVRYRGSTPAENDERALDAYAASGVYHAASVPTTISEPRMPATQRRIDEPSNLGWICRAIADDVAAAHARGRAPLIVGGDCTHAVGVVAGLQRSHGPNARIGLVWFDAHGDYNTPRTTLSGMLGGMPVAVCAGLALPQWRDLAGMQAPLPTDRIMLVDARNLDPPEEQLIRATETAIADVNDFAGPLASLAAACDVLYLHVDSDILEAALVPNHATREPDGPGLSEVSAAIDTVMATGKVGAFAVVSVYGAGPGSDISVASGTALIRAGLEAWARHGTV
>NC_009767|3648895:3720111|3712167_3713601_+|WP_012121353.1|DBSCAN-SWA
MTDLHNLCFLTAVELMQRIRTHEVSCVEVMEAHLRQIERTNPQVNAIITLLPEQALERARAADTALHRGDEVGPLHGLPVAHKDLVQTKGVRTTFGSPIYADFVPDVDDLIVIRLRKAGAIMIGKTNTPEFGAGSQTFNPIFGATRNPYDLSKTCGGSSGGAAVALACGMIPIADGSDTGGSLRNPASFCNVVGFRPSPGRVPSCSDRAAWQTLSVLGPMARTVADTALMLSAIAGPHPCSPIALQKPGAHFRQPLERDFRGVRVAWSRTLGGLPVDPQVTAVLEEARPALEAIGCIVEEVEPDFSGADEAFRVWRAWSYEQSLGELADTHRDRLKETILGEIERGRALTGPQIGYAERLRTALYHRMRRFMKTYEFLALPTVQVPPFPVEQPYVTEISGVPMETYIDWMRSCYFISITSLPAISVPAGFTRDGLPVGLQLVGRYRNDFGVLQLAHAFEQATGHWRRRPPIVEMGHG
>NC_009767|3648895:3720111|3672056_3672635_-|WP_012121326.1|DBSCAN-SWA
MSSALAIASVTAFLKSVLENGLVDEGVNASIGSDAIVSALPPDRIATGADERPQINLFLHQVTPHAGLRTGERSGQRMALGLDLHYLLTAYGAQDLQIEILLGYAALVLCRMPFAGRDAIREALATLASDDHGGIPPPTLQALAGFDPGSQIERLEIRPQYLSGEELTKIWSPLQARYRPSLSYRVSMVTIG
>NC_009767|3648895:3720111|3719826_3720111_+|WP_083760317.1|transposase|DBSCAN-SWA
MRRYELSNAQFALLEPYLPKNGSVGHPWADHRRILNGLFWKLRSGAPWRDIPDRYGPWQTIYDRYVFWRRNGTWERILRALQVELDAHGEIDWS
>NC_009767|3648895:3720111|3659986_3661552_-|WP_012121318.1|tail|DBSCAN-SWA
MPEYLSPGVYIEEVSSGPRPIEGVGTAMAAFVGFAAAGPVNQPVLVTSWTQYVEKFGRLDESGRRNPHMDGAYLSHAVYGYFLNGGGRCYVTRIPQQADGKAPPPPRLELPTRASKALTSLIVTPKSETASDIQVEIGPPVGENPPPEAFTVKISMGEVKEVYENVSFNKRPKDGTSYVVEKINSSSTLVQVAEGPATGSLADRVPEFGMSVIKPLAPIVPARVDATTFVGSAAERSGVEGLEIAEDVTMICAPDLMAAYQSGAITKEGVKAVQLAMIAHAERMQDRMVILDPLPGLTPQQVKQWRERDTNYDSKFAVLYYPWLKIMGPDGKTEMEIPPCGHIAGIWARNDNTRGVHKAPANEVVQGALGPAIAITKGEQDVLNPIGVNCIRSFTGMGLRVWGARTLSSDAAWRYVNVRRLFNYVEKSIERGTQWVVFEPNDPNLWARVKRDVEAFLTVCWRDGMLFGLTPREAFYVKCDEELNPPEVRDQGKLIIEVGLAPVKPAEFVIFRFSQFAGGGA
>NC_009767|3648895:3720111|3698491_3701677_+|WP_012121345.1|DBSCAN-SWA
MLFFTVEKLKARLEEMRAAIIRDTRPITDVFTCPVPGAPSEHAMSPPPPPDDPSWRPLKVGERWGGDPHNPDKPDEPLPWGMPVDGGHTHWLRAIIRIPEEWRGRQVLMRMRWSAEGHAGIEGIAYLDGTTLAGIDEPHPAILLPEHAHEGDHELLIRCYTPYRRSFGGLELQLRSDIIARLAAVMYAILDALPTYRDSDPEKHALLDRINRAYNLLDLREGWQSERFEISAGAALTFLRETLTANLAPGQRPIILATGHAHMDVAWLWPLWRTHQKIAHTVATALHLMERYPEYHFSMSQPQTYAFLKQDDPELYERLRQRVAEGRFEPVGAMWLEPDCNVTGGESLVRQVIHGIRFFENEFGPIEHIVWLPDVFGYSAALPQIMRLAGISCFMTTKISWNQFNRMPYDTFRWRGIDGSEVLAHFVTATSAPVKPNPTEAQFYTYNGSMLPSEVFGTWNHYRQKDINDEVLYIYGHGDGGGGPTEEMLELARVMADLPGFPVVQPGRVEQYFQRLRQRVWNNPRLPVWVGELYLEYHRGTYTSQARTKQNNRQAELLLREAEWLNAWAVTHGAINRQADLDAAWRTVLLNQFHDILPGSSVPLVYVESEQQFAEVRDTVETVRHAAITDLTGSHSNGAAPHLAVFNGLAWDRTECVAIPLEDLRQPLIEGPTQVVEQIDGTRTLLVEATVPAFGYAALRAARHPSPPAQFITRRDYLASDEFRIEFDANGEIGSLYDARYEREIIAEGATGNQLVLYEDRPMFWDAWDIDPFYLEKPYPIHNISEWRVIEEGPLRATVEIARRFGRSTIRQRISLWHNNRRIDFETEVDWQERQNLLRVLFPLRLNAARATCEIQFGAVERPTHRNTSWDWARFEVCAHRWIDLSEGGYGVALLNNGKYGHSLLHNTLGISLLKSAVIPDPQADRGLHRFIYSLLPHAGDWREAQVTRRAYELNAPLRPVTVAGEIPAEGRSFLHVDSDHVIVETIKTADDGDGLIVRMYEAHNQRGQVRLEFGQPVESAVEVDLLERETGPVTVDGRTVRCNVRPFEIKTIRVRLKPPL
>NC_009767|3648895:3720111|3662523_3662946_-|WP_012121320.1|DBSCAN-SWA
MPINPHRDYTRQEQLALDLTELFAEGLRDEEGRLPLALQGIGSAAMAMQVEEAGVPLPMFNRMLTTANEISLERAGAMPEELVEELEKRGFPQIARIVRAGIAACRDEDDYRNFVRWLIQVRNLIVFRAQALRHRTSDQP
>NC_009767|3648895:3720111|3675624_3675918_-|WP_012121330.1|DBSCAN-SWA
MKQRYYTIKSAAALCGMHEQSLRLYERRGLIRPQRTPGNIRRYTESDIEQIRFIKRLIDDLGVNLAGVEVILHLRQQLIAAQRELEELRDRLPVDVS
>NC_009767|3648895:3720111|3705243_3707424_+|WP_012121348.1|DBSCAN-SWA
MRFISFNLFIRALTIVSFVVGLIGGIGLIPRPVRANVQPSCSTTPLFTNGSFITGTGNGASGANTSSPQGTDTGFGYLVDPTRTQTVPAGPARARLADDFTVTGNGWRPSAITLYAYQINSGTTSTITGVVDLRLWNGVPGDGGAVIAGPVNGTITNNNWTNVYRVPANDPTQTSRPIMAVTINWPFTVTTLLTGTYWIEWGMAGNESLSGPWVPPVSTGTTNNARQLDLTGGEPGTWAPRGDYTNTSNIVEFPFVICGSEIPTPQITSLSPNAVTAGSDEFTLTVNGNGFIDGTGSDRSVVHWNGSPRATTYISSTQLTATIPASDIATAGTASVTVVNPGNVTSNTETFTITNPTPAISSLSPSTAVAGSSGFTLTVTGTNFVNGSVVRWNGNDRTTTFVSGAQLTATIPASDIATAGTANVTVVNPAPGGGESGAATFTIINPTPTITAISPSSATAGGSGFTLTVTGTNFVNGSVVRWNGNDRATTVVSSTQLTATIPAGDIATAGTANVTVVNPAPGGGESGAATFTINNPTPTITAISPSSATAGGSGFTLTVTGTNFVNGSVVRWNGNDRATTVVSSTQLTATIPAGDIATAGTANVTVVNPGPGGGTSNTATFTIQASNPTPVIGSVSPDLIPVGDTDVVLTVTGNNFVANSVVRWNGTSLTTTFVSATQVQATLPSAQRSAAGDGSVTVFNPAPGGGVSNAITVPVRFQVMLPLVVR
>NC_009767|3648895:3720111|3718618_3718951_+|WP_012121357.1|DBSCAN-SWA
MGKFVKGDVVVVPFPFSDLSAAKRRPALVVATLTGDDVILCQITSKAITDNDALAISDSDFTSGGLRQDSNVRPNRIFTADSNIVLYRAGVLSPKKVQEVIAKIIQIISA
>NC_009767|3648895:3720111|3686984_3688271_+|WP_012121339.1|DBSCAN-SWA
MDLSGHAQQVWIFLGESDQWHGRPLSLALLEMLKRNGIAGGTVLRGIAGYGAHSFIHTTSLVELSSDLPVIVTFVDRPDRVARVMPEIMSMVREGLITTIPVEVLKYTSRAVGPFPAHLTVADIMSRQVVSVRPDTPIAVIVELLIDRALRSAPVVDAENRVVGIITDGDLLTRGATELPLALQRELSLAERAAAVEILAERPHTAADLMTPDPVTLPMTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMVSRYDLLSTVAEGLRQRPAEPVVPSGGAPQTVGDIMMTGIPTVRPDTPLAETLDHLLETDKRRVVVVDEHHHVVGIISDGDVLRRAAKRVRSGALRALAAWFGGGARPPGLEVAAEGRTAADVMTSPVVTLPADAPITEAVRLMMTHKIKRIPVVDADKRFVGMVGRAGVLAALSRRT
>NC_009767|3648895:3720111|3714770_3715253_-|WP_012121355.1|DBSCAN-SWA
MARVVCLSDTVSLVRLVREEATSCGHLLIPFPGSRLNDAFRQAVRQAMPDVVLFELTSTLDNPHIYFFLRSDQAMRSIPVIFLSPRPDLELLAAALGADGYLSLPLDRGALRATLRAYLDIPAPVDVLRIEVPRSTVQRYAALMQRPPVMAQVAAGLPVV
>NC_009767|3648895:3720111|3685692_3686268_+|WP_012121337.1|DBSCAN-SWA
MNFRKLTASALIIAGAWLLLWSMGSRFDLSRSAQAQELPPRPTLTPVAPAEEPRREPRPGRIVGTVIDLTTGAPAAGVTVRINSDALTTDANGNYGRENLTPGTYVVDLIIPPERGTPAQGAITITLPEGETARQDLAFYGPPPAPMPSAETAPMPPAALPVTGASDDAAWLAALGTLLLAGGGFLLRRAT
>NC_009767|3648895:3720111|3652854_3654636_-|WP_012121312.1|DBSCAN-SWA
MSNNNNDRHVSDFYLKLDGADAPLELVRDILDITIENSLHLPDVATLVINDRRLTWVDDSRLAPGKTLVVNVRRNRATETIFDGEIVEVEPHFDVEGARVVVRAFDRLHRLARGRYARTFLNVTDSDVIQQIAGEVGLQAQVDATSRVHEYLVQWNQTNLEFLRERAAALGYLLYVDGRKLFCVKPPSARAPVELKWGEDLSAFHPRLSTIDQVNEVNVRGWDPQKKEVVIGQGTTGAVTPAIGVPDKGGALAKKAFSITAKDLLTESAVRSQSEAEQIAKAVLNQHESRCIEADGTAAGNPKIKAGAAVKITNIGIRFSGAYVVTSATHRYNAAGYVTDFSVSGVNPDALLHLLQPETPRLRIEGLVIGIVTDNNDPDNLGRVKVKFPTLSDQQSHWARVVSVGAGANRGIEFLPEVNDEVLVGFEAGDMRAVYVIGGLWNGKDAPPKKTGEIVKGGKVEQRVVKSRSGHVITLDDSDSAPSITIEDKSGNMIKLDSKKNELTIKVKGNGTISADGNLTIQAKGKIDIKSQQAMAIEGATGLDLKSNANASLQANASLDLKSNATASLQANATLDVKSSAILTIQGTLVKIN
>NC_009767|3648895:3720111|3688501_3690181_+|WP_012121340.1|DBSCAN-SWA
MTDANKIIYSMIRVGKVVPPNRPVLKDISLSYFYGAKIGVIGLNGSGKSTLLRIMAGVDHDFFGETVIAPGYTIGFLEQEPRLDDTLTVRQTVEQGVQQIVDLLRRYDDINERFSDPDANVDALIAEQSALQEQLDHLDAWDLDSRLELAMDALRCPPGDTPVAVLSGGERRRVALCRLLLQKPDILLLDEPTNHLDAESVAWLERHLQDYPGTVVCVTHDRRFLNNVAEWILELDRGMGVPWRGNYASWLAQKQQQIAAAEKAESQRQKTLTRELEWINTAPRARQTKSKARIAAYEQLLSQSAERAERDLEIYIPPGPRLGDLVIRAEHVTKAYGDTFLYDDLTFDVPPGAIVGVIGPNGAGKTTLFRMITGQEQPDSGRLIVGPSVKLGYVDQSRATLNPDRTVWEEISGGDDVMLLGNRQVNSRSYVARFNFTGADQQKKVGTLSGGERNRVHLAKVLRSGANVLLLDEPTNDLDVHTLRALEDALINFAGCALIISHDRWFLDRVATHILAFENESSVLWFPGTYSEYEEDRRRRLGKAADQPHRAVYRRLTRG
>NC_009767|3648895:3720111|3672924_3674508_+|WP_012121327.1|DBSCAN-SWA
MDEHNKRSGDRRDAMITLHVPRSVLTALWALGSLIALALVAVAFVAGLALRPVMPTAAPVAVTTIILEATATSAPIVAAINVSTSPTVVASPTALPTDIPTTQPTIDLIRPTAAFPTAMLPTAASTATPDTVDFRIDSPPGAEGQPPAANAPVQAAIAQPQPQAAPPGGAPAARPADAGGSGGSVRPVATARPAQHALRGSVRWSAASSPILIQNDLLVSSGASLIIEPGVEVQIGRGVSLVIDGSMVALATPDQPVRFTQIGGGDDPRLRWESIIGRAGSVIDLRNVTITGGGAGGSVLTVQAGRLSLQSARIINNGGHLRIDDSFVIIRDSEISGNRMPYGSAIDITLSRGGGDSPGSDIVIVNNRILNNALVAGTAPLRITNLSFERPARIEIEQNLLVGAAGPNLALFTNAQLMGNVRCNTLIGGANGLSLRSDAPPNLSPMLNIRDNAIEAHEPPNNPFYRQFNIGKGATSDLPLTMTNNWWELPSGPYEPAANPEGRGEAVGPNITFLPWLPERPACAPRF
>NC_009767|3648895:3720111|3716080_3716311_-|WP_041330859.1|DBSCAN-SWA
MARAQSNSQSLAQGEIRSTDGLPIVNPHAAGADIGAEQMYVCLPGPERTHIVRSFGAYTADLQRSPSGSSRTASRR
>NC_009767|3648895:3720111|3667583_3669236_-|WP_012121324.1|DBSCAN-SWA
MSERQRVALPRRRPVETATTATLRSWRAVNALVDQSAPVGDGHLFNQMRLSAPAPLVQRKEPQSDGMTGAFTTGDTAPTDSAINPLVGLKRGDGLNYGTWDLRPRVKLLQHKLNEKTGAGLNVDGMWGPKTSAALETFMLSRSTVPAEIVDQDTADALLDRRKETPGPGPQPIPPGPQPTEAPYNQTLEDVLDAVWLQYQLTFEGQRNGLHRLEKDLATIEKPKNTLVEVLKDAGKAALDALLGWGGGALRGPIKAALAGLGETIAKDGVDKVFDKAQESAGTEVGKKVDELGNEDGPTLETFLEAQRAALEEASSQTQENFLLETRAKLRLPAEGEPVSSGPEDPRVVRAKKLLDAVKRERPQAFQKQYDESLAKWAIAQAQSKLGTMDSPSMSVGEDKVKTTDMSKAEPGMPGVLTIEIEGTRPELPVKITGAKIAGLSEKTRQALERQQKSILDLGMPRYASGKVEINTGLGSILNFTKPTIRIAQNETGDLFERESTEGGKEWLKKKARPYEEVLTEDLVKEGMRMVWEEIDRKRLSDVPGGLKGP
>NC_009767|3648895:3720111|3686595_3686970_+|WP_157042846.1|DBSCAN-SWA
MNAIAIAVGAAIGANLRYSLSLWAAQRWGASFPYGTLIVNVIGSFLIGLVLVLATTRLNLSDLARLLIVTGLLGGFTTFSSLSFETYSLIVSGSWRVAGIYLASSFGLGMAGVFLGAGVARLLP
>NC_009767|3648895:3720111|3683136_3685416_+|WP_012121336.1|DBSCAN-SWA
MHHSRAFSLATIFFVITLAAGWLLSAPSSRAATFTIPCGDVTALITAITTANSNNQPDTIALAAGCTYSLTTVDNTVGGSANGLPAIIIDSGNPTNSLTINGNGATIERAAGSPSFRLLYLTNVAVTINDLTFRNGFAEDDEGGAMRARSPDLTLNRVTFEGNRATYDGGALVARDSNLTLNRVTFESNRAGSDGGALYTVSVMANLSDSIFRNNQSDANGGAIAFRVDGPGQATIKGSTFSNNQAASDGGAIAAFHEITVQNSTFSNNQADGDGGAVLSNESAVVAYTTITGTQTGGDGALNGSITLRSALVAGNTDTSTSPGNYPDIAGSIASDGYNLIGNVGDYDFSANTTGDQYGDPNGTTIPNSGAVESPTPIDPLLAPLANNGGPTPTHALLAGSPALNRILGGTNDCGVAIAIDQRGISRPQDGACDVGAFEAIPAPEIVVYNGPDTSSPELTNNQTTAVDFGATTVGAPISRVFAIRNTGTAPLTLGALSLPSGFAVVGAFPTGPVAPGATVTFTVQLTAVAAGVFSGTLSFVNGDADENPFQFPIRGVVTAATPTLQQTYLPLIVQPGQPDLIIAGIEIIPNQTSFTAGQPVEIRVTVKNVGTAPAGSFWVDLYLNPDRPPQINDLWHDRCALRPCFGVAWGVTQILQPGEQITLSTGGGYDPLRSYWLGWLANGTTTIYALADSWNTSGASGAVRESDETNNRGVRDGLTVSGANPPAPPWKPSVLTGAAQESLLPERPAYDGTFRAER
>NC_009767|3648895:3720111|3658558_3658750_-|WP_157042657.1|DBSCAN-SWA
MPQPTSRHSDEMPDRSPSQERSDQHDTRIDIEALADRVYRLMREEARLERARGVSVGRQRRKR
>NC_009767|3648895:3720111|3654628_3655306_-|WP_012121313.1|DBSCAN-SWA
MPDTSLVKAKIINLDNPSQEVECLFNPKEYTFTKQNSWSRGETPSTNVPQLEFSGGQPATLSMHLLFDTYTSARPGSKPKDVRKVYTDKLWSFMMIDPDLKDPKSTRGRPPKVRFQWGASWSFKAVITNITQKFTLFLVDGTPVRAELDVTFQQIEDTANLQPQNPTSGGIGGERVWRVREGDTLAWIAYKSYGDATRWRPIAEANGLERVRELTPGAVLVIPNE
>NC_009767|3648895:3720111|3677270_3678461_-|WP_012121332.1|DBSCAN-SWA
MLKGRTRFIALLLAVLLTLAACGGQPTGSPGNEYGSGGATTEPTTAPPAQPSTGDELQVDRSRLSSELRFFNWTDYVDPSILEDFEKEYGVKVIVDLFDANEDMLAKVRAGRSGYDIVTPSDYAVEIMWRDGLIAKLDKSLLPNLKNIDPDLLNKYFDPGNVYSVPYMYGITGIAYNRQSFPNGVESWAVLFDTAEIARYRGQFSMLDDERETPGAALKFLGYSLNETSPEALKKAQDLLIAQKPFLAGYNSSDVNRKLASGEYVIAHAWSGSALQARNGLGDEFSGNPDIAFVIPKEGGMIWMDNMVILADSPNAYTAHVFMNFLMRPDIAARNAEYIGYLSPNVEAIKLLPQEIIDLYNEGFAPNDEVLKRLEWAIRNDQTAAFTDLWTAVKGE
>NC_009767|3648895:3720111|3675932_3676796_-|WP_012121331.1|DBSCAN-SWA
MAFKDYYEILGVDRNATDAEIKKAYRKLARQYHPDINPGNKAAEARFKEINEAYEVLSDKEKRAKYDRFGRDWQRYQDIPDFGGFGAGDFADIFETLFGGGRGGRSSVTYRAKGQDVEQSVDITLEEAFSGTQRTLQVQSLNGSLRSITVRIPPGVDSGSRVRIAGEGAPGIGGGARGDLYLVINVLPHSRFERRGDDLYVRIPVDLYTMLLGGEVKVPAMGGRTVALKVPAGTQNGKVMRISGQGMPRLRDPQTRGDLYVTLEVSLPTSLSPRERELVEQLRALAR

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041330837.1|3648895_3649924_-|tail	phage tail protein I	D4HTV4	Vibrio_phage	1.3e-05	38.6
WP_012121309.1|3650109_3652140_-|plate	putative baseplate assembly protein	A0A218MNB6	uncultured_virus	4.3e-08	21.6
WP_012121310.1|3652151_3652544_-	GPW/gp25 family protein	A0A126HGC9	Vibrio_phage	4.5e-07	34.8
WP_012121311.1|3652550_3652841_-	type VI secretion protein	NA	NA	NA	NA
WP_012121312.1|3652854_3654636_-	VgrG-related protein	NA	NA	NA	NA
WP_012121313.1|3654628_3655306_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_083760314.1|3655320_3658122_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_012121315.1|3658126_3658555_-|tail	phage tail protein	T2KTT5	uncultured_phage	1.5e-11	33.9
WP_157042657.1|3658558_3658750_-	hypothetical protein	NA	NA	NA	NA
WP_012121316.1|3658755_3659124_-	hypothetical protein	NA	NA	NA	NA
WP_012121317.1|3659527_3659968_-|tail	phage tail protein	NA	NA	NA	NA
WP_012121318.1|3659986_3661552_-|tail	tail protein	J9PVC2	Bacillus_phage	3.3e-64	34.0
WP_012121319.1|3661564_3662527_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_012121320.1|3662523_3662946_-	hypothetical protein	NA	NA	NA	NA
WP_083760372.1|3662969_3664211_-	peptidoglycan-binding protein	NA	NA	NA	NA
WP_012121322.1|3664723_3666616_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_012121323.1|3666635_3667565_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_012121324.1|3667583_3669236_-	hypothetical protein	NA	NA	NA	NA
WP_012121325.1|3670055_3672029_-	ATP-binding protein	K9MCS8	Sulfolobus_virus	1.4e-08	34.3
WP_012121326.1|3672056_3672635_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_012121327.1|3672924_3674508_+	hypothetical protein	NA	NA	NA	NA
WP_012121328.1|3674567_3674966_-	hypothetical protein	NA	NA	NA	NA
WP_012121329.1|3675131_3675551_-	transporter RbsD/FucU	NA	NA	NA	NA
WP_012121330.1|3675624_3675918_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012121331.1|3675932_3676796_-	J domain-containing protein	A0A1V0SF83	Hokovirus	2.2e-22	24.6
WP_012121332.1|3677270_3678461_-	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012121333.1|3679326_3680187_-	ABC transporter permease	NA	NA	NA	NA
WP_012121334.1|3680334_3681243_-	ABC transporter permease	NA	NA	NA	NA
WP_012121335.1|3681258_3682377_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.6e-25	45.5
WP_012121336.1|3683136_3685416_+	choice-of-anchor D domain-containing protein	A0A2K9L1M9	Tupanvirus	2.2e-05	34.7
WP_012121337.1|3685692_3686268_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_157042846.1|3686595_3686970_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	9.0e-05	31.5
WP_012121339.1|3686984_3688271_+	CBS domain-containing protein	NA	NA	NA	NA
WP_012121340.1|3688501_3690181_+	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	3.2e-49	28.2
WP_012121341.1|3690306_3692166_+	phosphoenolpyruvate carboxykinase (GTP)	NA	NA	NA	NA
WP_012121342.1|3692384_3693503_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_012121343.1|3693872_3694718_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_012121344.1|3694857_3697743_+	GAF domain-containing protein	NA	NA	NA	NA
WP_012121345.1|3698491_3701677_+	alpha-mannosidase	NA	NA	NA	NA
WP_041332052.1|3702294_3703170_+	arginase	A0A0N9R043	Chrysochromulina_ericina_virus	1.7e-06	27.4
WP_083760315.1|3703324_3703552_+	DUF4058 family protein	NA	NA	NA	NA
WP_049768839.1|3703517_3703802_+	DUF4058 family protein	NA	NA	NA	NA
WP_041330855.1|3703854_3704754_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012121348.1|3705243_3707424_+	cell shape-determining protein	NA	NA	NA	NA
WP_041330856.1|3707848_3709039_+	MFS transporter	NA	NA	NA	NA
WP_012121350.1|3709079_3710528_+	PDZ domain-containing protein	NA	NA	NA	NA
WP_012121351.1|3710884_3711694_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.3e-40	42.2
WP_012121352.1|3711730_3712171_+	DUF4190 domain-containing protein	NA	NA	NA	NA
WP_012121353.1|3712167_3713601_+	amidase	NA	NA	NA	NA
WP_012121354.1|3713985_3714195_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_012121355.1|3714770_3715253_-	hypothetical protein	NA	NA	NA	NA
WP_083760316.1|3715463_3715865_-	hypothetical protein	NA	NA	NA	NA
WP_041330859.1|3716080_3716311_-	hypothetical protein	NA	NA	NA	NA
WP_041330866.1|3718409_3718634_+	hypothetical protein	NA	NA	NA	NA
WP_012121357.1|3718618_3718951_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_083760373.1|3719371_3719641_+	DUF2442 domain-containing protein	NA	NA	NA	NA
WP_083760317.1|3719826_3720111_+|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-08	33.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage
NC_009767.1|WP_012121315.1|3658126_3658555_-|phage-tail-protein	3658126_3658555_-	142 aa aa	NA	NA	NA	3648895-3720111	yes

Protein sequences of NC_009767.1|WP_012121315.1|3658126_3658555_-|phage-tail-protein

>NC_009767.1|WP_012121315.1|3658126_3658555_-|phage-tail-protein
MPTTEEAYPSYRFYVEIAGVPHAVFTEVSGLQVETEITEYEEGGNNDFVHRLPGRTKIGNITLKRGMTSSNELLQWFLKIARGSIDRRNVTVIMYDSAGKELFRWNFIEAYPIKWTGPQFTAASTEAAVETLELTHNGMTVG

Self-targetings in the prophage

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_009767_21	Orphan	21.4|1001331|21|NC_009767|CRT	1001331-1001351	21	3669872-3669892	2
NC_009767_21	Orphan	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	3669872-3669892	1
NC_009767_21	Orphan	21.4|1001331|21|NC_009767|CRT	1001331-1001351	21	3669927-3669947	2
NC_009767_21	Orphan	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	3669927-3669947	1
NC_009767_21	Orphan	21.4|1001331|21|NC_009767|CRT	1001331-1001351	21	3678833-3678853	2
NC_009767_21	Orphan	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	3678833-3678853	2
NC_009767_21	Orphan	21.4|1001331|21|NC_009767|CRT	1001331-1001351	21	3679036-3679056	2
NC_009767_21	Orphan	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	3679036-3679056	2
NC_009767_21	Orphan	21.4|1001331|21|NC_009767|CRT	1001331-1001351	21	3679231-3679251	2
NC_009767_21	Orphan	21.15|1002010|21|NC_009767|CRT	1002010-1002030	21	3679231-3679251	1

1. spacer 21.4|1001331|21|NC_009767|CRT matches to NC_009767 position: 3669872-3669892, mismatch: 2

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

2. spacer 21.15|1002010|21|NC_009767|CRT matches to NC_009767 position: 3669872-3669892, mismatch: 1

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

3. spacer 21.4|1001331|21|NC_009767|CRT matches to NC_009767 position: 3669927-3669947, mismatch: 2

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
** ****** ***********

4. spacer 21.15|1002010|21|NC_009767|CRT matches to NC_009767 position: 3669927-3669947, mismatch: 1

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggaccctcgcgcct	Protospacer
********* ***********

5. spacer 21.4|1001331|21|NC_009767|CRT matches to NC_009767 position: 3678833-3678853, mismatch: 2

atggtcgggcccctcgcgcct	CRISPR spacer
atcgtcgggtccctcgcgcct	Protospacer
** ******.***********

6. spacer 21.15|1002010|21|NC_009767|CRT matches to NC_009767 position: 3678833-3678853, mismatch: 2

attgtcgggcccctcgcgcct	CRISPR spacer
atcgtcgggtccctcgcgcct	Protospacer
**.******.***********

7. spacer 21.4|1001331|21|NC_009767|CRT matches to NC_009767 position: 3679036-3679056, mismatch: 2

atggtcgggcccctcgcgcct	CRISPR spacer
atcgtcgggtccctcgcgcct	Protospacer
** ******.***********

8. spacer 21.15|1002010|21|NC_009767|CRT matches to NC_009767 position: 3679036-3679056, mismatch: 2

attgtcgggcccctcgcgcct	CRISPR spacer
atcgtcgggtccctcgcgcct	Protospacer
**.******.***********

9. spacer 21.4|1001331|21|NC_009767|CRT matches to NC_009767 position: 3679231-3679251, mismatch: 2

atggtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtccctcgcgcct	Protospacer
** ******.***********

10. spacer 21.15|1002010|21|NC_009767|CRT matches to NC_009767 position: 3679231-3679251, mismatch: 1

attgtcgggcccctcgcgcct	CRISPR spacer
attgtcgggtccctcgcgcct	Protospacer
*********.***********