CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_014334	Lacticaseibacillus paracasei, complete sequence	6 crisprs	csa3,DinG,WYL,DEDDh,cas3,RT,csn2,cas2,cas1,cas9	0	11	4	0
NC_011352	Lacticaseibacillus paracasei plasmid plca36, complete sequence	1 crisprs	NA	1	1	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_014334_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014334_1

267164-267308

Orphan

Consensus_repeat	Method
GGGGTCCTTATGAGCAGGTTTCTGCGCCTGTTTGCGCGTTTCGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014334_1

>merge|NC_014334|1|267164-267308|CRISPRCasFinder
GGGGTCCTTATGAGCAGGTTTCTGCGCCTGTTTGCGCGTTTCGAAAGTAGAGCATAAGCGGCCCCAAGCCTAAATGGCCGGGCTTTGGCATTTAGGCTTGGGGTCCTTATGAGCAGGTTTCTGCGCCTGTTTGCGCGTTTCGAAA

>NC_014334|1|1|267164-267308|CRISPRCasFinder
GGGGTCCTTATGAGCAGGTTTCTGCGCCTGTTTGCGCGTTTCGAAA	GTAGAGCATAAGCGGCCCCAAGCCTAAATGGCCGGGCTTTGGCATTTAGGCTT
GGGGTCCTTATGAGCAGGTTTCTGCGCCTGTTTGCGCGTTTCGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_014334.2\|WP_003563028.1\|269382_270165_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NC_014334.2\|WP_003563042.1\|275360_276101_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NC_014334.2\|WP_003563013.1\|260388_261240_-\|metallophosphoesterase-family-protein	unknown	unknown	gnl\|CDD\|223695
NC_014334.2\|WP_003563036.1\|271658_272258_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NC_014334.2\|WP_003568841.1\|281467_281782_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NC_014334.2\|WP_003563026.1\|268539_269298_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NC_014334.2\|WP_003563002.1\|255037_256606_+\|gluconokinase	unknown	unknown	gnl\|CDD\|130381
NC_014334.2\|WP_003563007.1\|258389_258734_+\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003563019.1\|264042_265137_+\|LCP-family-protein	unknown	unknown	gnl\|CDD\|181811
NC_014334.2\|WP_004562160.1\|261236_262118_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NC_014334.2\|WP_003563040.1\|273653_275201_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NC_014334.2\|WP_003563024.1\|267408_268095_-\|hydrolase	unknown	unknown	gnl\|CDD\|270620
NC_014334.2\|WP_013245369.1\|272335_273274_-\|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl\|CDD\|377122
NC_014334.2\|WP_003563021.1\|265287_266667_-\|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl\|CDD\|283235
NC_014334.2\|WP_003568836.1\|256790_258143_+\|gluconate-permease	unknown	unknown	gnl\|CDD\|129873
NC_014334.2\|WP_013245368.1\|258807_259527_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213202
NC_014334.2\|WP_003568838.1\|271035_271368_+\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003563030.1\|270183_270927_+\|DUF975-family-protein	unknown	unknown	gnl\|CDD\|227810
NC_014334.2\|WP_003563017.1\|262114_263914_-\|oligoendopeptidase-F	unknown	unknown	gnl\|CDD\|341071
NC_014334.2\|WP_003563011.1\|259523_260321_+\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033

Protein	Function_ID	Function_description	E-value
NC_014334.2\|WP_003563028.1\|269382_270165_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	5.11135e-36
NC_014334.2\|WP_003563042.1\|275360_276101_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.73561e-07
NC_014334.2\|WP_003563013.1\|260388_261240_-\|metallophosphoesterase-family-protein	gnl\|CDD\|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	2.75673e-13
NC_014334.2\|WP_003563036.1\|271658_272258_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	6.78672e-47
NC_014334.2\|WP_003568841.1\|281467_281782_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	2.32335e-29
NC_014334.2\|WP_003563026.1\|268539_269298_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	4.33431e-57
NC_014334.2\|WP_003563002.1\|255037_256606_+\|gluconokinase	gnl\|CDD\|130381	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway. [Energy metabolism, Sugars].	0
NC_014334.2\|WP_013245368.1\|258807_259527_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213202	cd03235, ABC_Metallic_Cations, ATP-binding cassette domain of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.	5.33729e-66
NC_014334.2\|WP_003563019.1\|264042_265137_+\|LCP-family-protein	gnl\|CDD\|181811	PRK09379, PRK09379, LytR family transcriptional regulator.	1.41929e-91
NC_014334.2\|WP_004562160.1\|261236_262118_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	5.68511e-110
NC_014334.2\|WP_003563040.1\|273653_275201_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	1.45525e-169
NC_014334.2\|WP_003563024.1\|267408_268095_-\|hydrolase	gnl\|CDD\|270620	cd14667, 3D_containing_proteins, Non-mltA associated 3D domain containing proteins, named for 3 conserved aspartate residues. This family contains the 3D domain, named for its 3 conserved aspartates, including similar uncharacterized proteins. These proteins contain the critical active site aspartate of mltA-like lytic transglycosylases where the 3D domain forms a larger domain with the N-terminal region. This domain is also found in conjunction with numerous other domains such as the Escherichia coli MltA, a membrane-bound lytic transglycosylase comprised of 2 domains separated by a large groove, where the peptidoglycan strand binds. Domain A is made up of an N-terminal and a C-terminal portion, corresponding to the 3D domain and Domain B is inserted within the linear sequence of domain A. MltA is distinct from other bacterial LTs, which are similar to each other. Escherichia coli peptidoglycan lytic transglycosylase (LT) initiates cell wall recycling in response to damage, during bacterial fission, and cleaves peptidoglycan (PG) to create functional spaces in its wall. PG chains (also known as murein), the major components of the bacterial cell wall, are comprised of alternating beta-1-4-linked N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), and lytic transglycosylases cleave this beta-1-4 bond.	2.76198e-08
NC_014334.2\|WP_013245369.1\|272335_273274_-\|ADP-ribosylglycohydrolase-family-protein	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	6.19632e-32
NC_014334.2\|WP_003563021.1\|265287_266667_-\|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl\|CDD\|283235	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein. This family consists of several bacterial branched-chain amino acid transport proteins which are responsible for the transport of leucine, isoleucine and valine via proton motive force.	7.36575e-108
NC_014334.2\|WP_003568836.1\|256790_258143_+\|gluconate-permease	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	4.50632e-167
NC_014334.2\|WP_003563030.1\|270183_270927_+\|DUF975-family-protein	gnl\|CDD\|227810	COG5523, COG5523, Predicted integral membrane protein [Function unknown].	5.48812e-07
NC_014334.2\|WP_003563017.1\|262114_263914_-\|oligoendopeptidase-F	gnl\|CDD\|341071	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid. This PepF family includes Streptococcus agalactiae PepB, a group B streptococcal oligopeptidase which has been shown to degrade a variety of bioactive peptides as well as the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly- Pro-Ala in vitro.	0
NC_014334.2\|WP_003563011.1\|259523_260321_+\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	1.10945e-41

>NC_014334.2|WP_003563021.1|265287_266667_-|branched-chain-amino-acid-transport-system-II-carrier-protein
MSPQPTLTKRQYLTLGSLLFGMFFGAGNLIFPIHMGQLAGSAWLPAAIGFLLSAVLLPLLSIMAISLTRASSMYDLARPAGHSFALFFLLATHASLGLLIASPRTATVTYSIGIAPFLGKDQQQIGLLIFSFIFFLTTFLLARNESKITTYIGKLLNPLLLILLAVIFFWALVIKGDIRAISFTSSPKLMSSNLINGFLQGYNTMDALAGLGFGVTIITALKLMGLHQASTRAKAVAKVGSLAMGLEALIYMLLILLGAISLGFSKLTANGGTAFNQIMTHYTGLIGTALLGAMTLLACLTTAIGLVTSFSQDLGHRFPKLGYHFFLPMTTIGAFLIANFGLDQIIAYSTPILMLLYPLAIALIMLGLMHPWIGKNTRIYKTTVAFTMIPALLDAIHALPAGLAQLPIFSSIQQFATTYIPWFGIGMDFVPFLLIGFLTGFIAAKLSGHKLAPDLPDPD
>NC_014334.2|WP_003563019.1|264042_265137_+|LCP-family-protein
MDKQPDSDQQTLKRKPKRRHPILRALAIIALVALFLAGGYAARFYSQAKKAVAKTYDPVSTKAVSSDLDGKKPISILLLGTDTGAFGRKDTGRSDTMMLVTINPKEKKTTMTSIPRDTLAEMVGTGSDSPTYEKINAAYAYGQSDAAIKTVEKLLDVPINYYVTVNMAGLSKIVDAVGGVDVNVPFSWTDWNTGGQTFKKGKAHLDGGMALAYARMRDEDPEGDYGRQKRQQEVINQIVKHLLSVKSLTNYQKVMDSLSSSMRTNLTFDDMMAIAQNYRASATTIDRQQLKGIGVYIDEAAYQVMTTETLQKMSNELRGQLGLESKTLSNFNTQQNEINNANGFDWTANNPVYTVSLDGATTGP
>NC_014334.2|WP_003563017.1|262114_263914_-|oligoendopeptidase-F
MQHLPARAEVPTELTWDLTTIYPDDKAWQVDFEAVRQQAKEAAALKGTLGKSPEALVAGIKAVLAVFRRFEKVYVYSSLKSDQDTGNAAYQAMNAKAESLAADLASQLAFMDPEILAIPADQLTAWRDTESLKPYGHFIDAITVNRQHVLTTAAESLIASAGDALNASHATFNVLNNSDLQFGFVENEDGETVQLSNGLYGQLIRSTNRKLRKDAFEALLRAYESLKNTFAQTLSGQIKAHNFNALAHHYPDARAAAMASNHIPESVYTTLLDQVNAHLPLLHRYIALRKKILNVDQLHMYDIYTPLTGRPPLSFTLDQAKDEALKALAPLGNDYLDHMREIFNNRYIDVVENKGKRSGAYSGGAYDTNPFILLNWHDAVDELYTLVHETGHSVHSWYTRHHQPYVYGDYPIFVAEIASTTNENLLTDYFLKNTNDPKVRAYILNYYLDGFKGTVFRQAQFADFEHWIHQQDQHGEPLTATSMSSYYADLNARYYGPDVARDPEIAFEWARIPHFYYNYYVYQYATGFAAASTLAAGISGGEPEAVSRYIGYLKSGSSKYAIDTMKAAGVDMTKPDYLEAAFSLFEQRLAELEKILQKG
>NC_014334.2|WP_004562160.1|261236_262118_-|NAD(P)-dependent-oxidoreductase
MSSVKLGFIGTGVMGTGIIKNFLKNGQEVVVFNRTQAHAQPVIEAGATWAESPHAVAAQCDIVLSMVGFPQDVETIYFGSDGILAGARKGALLIDMTTSTPTLAKKIAAKAAEKGLQAVDAPVSGGDIGAKNGTLTIMVGGDKTLLSRLQQLFAPIAASVNYFGPAGSGQHAKMANQIMIAGTMTGLTEMLVYAKAAGLDLDETLKVVGGGAGANWSLSNYGPRILQGDYTPGFFAKHFLKDLRIALDEADNMHLQLPATQLAKQLYEQMVNTGKGNLGTQGLITMNDRWDQA
>NC_014334.2|WP_003563013.1|260388_261240_-|metallophosphoesterase-family-protein
MTTIAILSDIHGNMTAFSAVIQDAKAHQADEYWFLGDLFLPGPGSDKLWATLHGLKPTHIVKGNWDDDLFWVLDGPVDLSQPTDVYFSRLVAYLWPHLTAENLATIRNWPLHEVFEQDGLIVSLAHNLPDKNQGHALYPDQPQLNFDQIAPDSQIDLAVYGHTHQQLLRYTSNGQVILNPGSIGQAYSPRPHLQTTTYADYALLQLNDGAITDLDLRQVPYDVSAELSLAKQQQLPYPEVYTKLRHTGATSTHNAAYLKQFEQRHDYQQEVAEFLHKYRHQHY
>NC_014334.2|WP_003563011.1|259523_260321_+|metal-ABC-transporter-permease
MNLFAYAFMQNAFMASTFIAITTGIVGVFVVARNMSFLAHTLSEVGFAGAAFAVFAGIRPLDGMLLFTAISSISVGRMSVQASRREASISAVSSLFIGLGILFLSLSSANASYATTILFGSIIGISRADVWQLVALAAGVLVTLYFGYRRLAFDSFDPVGSAAQGLKSKYISIYFLLILAVSVSIGAQIVGSLLVFILLTLPPNVAKYLGRTLPQMIVISVITALIGVWSGLYLGFLTNWPVTFFIAAIEFLFYFLALWYHHRTN
>NC_014334.2|WP_013245368.1|258807_259527_+|ATP-binding-cassette-domain-containing-protein
MSEPILTVNHLSFGFRDQQLYQDLSFQLNVGSMTSLVGPNGVGKTTLIRLLMAQLKPQAGTIRFRQQPPVRLGYVPQFRNVDTEFPLSIRSFIQLRQLDHLFFWHTGKEKAALDAVIKATHLGKIADTRLGMASGGEKQKAYLAQALLDDPNFLILDESTASLDVNTKQELMDLVQELNQTRQLTVLFVTHDLSLAKKYTQQYLLLTGSSYEMKPTAQMDLKAMPEELRNDAENRGVVA
>NC_014334.2|WP_003563007.1|258389_258734_+|hypothetical-protein
MYEPTKKRRVAEDVAKVFPKEVTNQIFDVIAVMNKAKQIVTAPVAIAFSDDYTDDEMYAMIIQGNLAPAQEFPLTYAGEKPFLGHGYILVVKDKPKTIRLDFSTANPFKAEESK
>NC_014334.2|WP_003568836.1|256790_258143_+|gluconate-permease
MDILVLVLGILLLLVLIIKFKFNTYVSLIITAVVVALGLGMAPAKIATSIQNGIGAQLGELALVFGFGAMLGRLVADAGGAYRIAHTLINAFGRRGLQLAVVLASFIIGIALFFEVGIVLLVPIVFAIAAEAGVPILTLGIPMAAALSVTHGFLPPHPAPTAISTALGASAGLVLAYGVIIAIPTVYIAGPLFSKLAHRFVPDAFERRGNLKALGPQKTFKLEETPSFGISVLTSLFPVILMAIATVYELVFHGGKLPKTPNGLDNVIAFIGSPSIAMLISLLFAMWAMGYARKLPAKAIMTTLEDAVKSIAMLLLVIGGGGAFKQVLIDGGVGDSVKNLFVGSGISPLILGWLIAVVLRIALGSATVAAMTASGLVLPLMQSAGIQPALMVLAIGAGSLAASHVNDAGFWMFREYFDLTIKQTLLTWTLLETIISVVGLGGVLLLSLVV
>NC_014334.2|WP_003563002.1|255037_256606_+|gluconokinase
MAIKYMIGVDLGTTSTKVVLFDLKGHAIATANNPYPLYQDTPDMAEEDPEEIFAATVGGLTEVMHRGNVQPDELGGVSFSAAMHSLILMDENDKPLTRVITWADNRAAAYATKLKQSDLGMTLFKNTGVPTHPMSPLVKLLWLSAEHPELVAQTSHFIGIKDFILFRFFGRYVQDYSLANATGLFNIHTMDWDDRALDVANVRRDQLPELVDTSYQLTGLNANYAAVTGIDAKTPFILGASDGTLSNLGVGAIDPGVLAVTIGTSGAVRVVTDKPVVDPQGRLFTYYLSPNHWVVGGPVNNGGIVFRWVRDQLFAPEKLTAEQLQVDSYEILTEIASKIPAGADGLLFHPYLGGERAPIWDANARGSFFGLTRQHTRAHMVRAALEGIVYNLYMVMLMIEGITGKPKAIQATGGFARSALWRQMLADVFEQEVNIPESFESSALGAVVLGMKSLGLIDDLNVVKDMIGVTNTHEPNADNFQAYRELLPIWIRLTRKLGSEYQAIADYQRAHPDPNAHIAAED
>NC_014334.2|WP_003563024.1|267408_268095_-|hydrolase
MASNHSQKVEAIADHADADNDSSHVNAKSIVLSNEAKVEQANAHSLINPKKEITFTVGTNDIAEAAHQIADQKAAAAKAAEEQAAAEQAAAEQAAAEQAAAEKAQQEAQQAAQNAAAASAASAASASSSAATTASTETTTNKGTFKLSFYDPSVLGSGLGYGGVAANLSVFPKGTRLKITLSDGTVWYRTVNDTGSFAAGNPNQLDVAMPNSQIPSAGVLTATVEVVG
>NC_014334.2|WP_003563026.1|268539_269298_+|DeoR/GlpR-transcriptional-regulator
MAMYREKRFEEIKKLLAARSELSIEDIMKAVGVSRDTARRDIVALDAQGVARRTRGGLVSLSFGHTIPSYSARLKRFSTQKTKMAKSALTLIKPGGVYFIDDSTTLLKLSQSIRQPVTVYTHSLDNAIALSVEERVNLHLFGGKLDHHARFFFEPTMLETLRRIAFDAAFIGATAIAEDGVYFSYMEDAQVKQAAALSARRVVVVSETEKFQIEAPYRGLELGQITTLITDKKLSQTHKQWFAPQTQFLLGD
>NC_014334.2|WP_003563028.1|269382_270165_+|glycosyltransferase-family-2-protein
MVKPLVTIIVPVYNLEAYVAHGLKSLIEQTYSHLQIIVIDDASKDHSPQIIAHFAELDSRIQPILKQVNHGVSAARNSGLALAKGDLVAFMDGDDWYEPDFIAHAVDMMARGWDLIAMPFYRDDPDPRPVHEALRKPKQLTREGLIRQMLHPIGYIRGYLWNKVFRRDVIEQVRLRFDESMTIMEDELFTATYVMATHRFLYTGHPAYHHVVRRDSATQSLGIIGAVPQQLYALWRIHQVLRVARRTEKVTKKEAIKIEH
>NC_014334.2|WP_003563030.1|270183_270927_+|DUF975-family-protein
MTEHLMTYRQLKQKAKGQLKEGTNRRDLMLAYLLPSLIQAAVAIITYLMVFALIQKFGIDKALTDPDGFQNYLQSGNRTGSMNTIQSLVNTMLIQGVNFGVLDLVRRKERVQPLHALLGLFNGQWFWGAISLWIFMYFLTLMGLSFFLIPGILLALGWRQAFWVFKDGHETNQRFSSISALIGSWRLMRGFKGDLLGLYVSMIGWYLLENITFHLFDWVINPYLQLVHANYYENRRAYKIAAQAAQS
>NC_014334.2|WP_003568838.1|271035_271368_+|hypothetical-protein
METEAYMTLAEVKARQAALKDKVPLDQAIAENIQNWAQWLLDEGFEGSYFTAKIDGDTINITDLDGHPAASISTDAPSYVEAFKDSDRMTMMAIQTKLRRLIDRQVLKSQ
>NC_014334.2|WP_003563036.1|271658_272258_-|signal-peptidase-I
MKNNSHSTLKTVLEFLVLFAVIFFASQLLMRYVLSKDVVQGTSMQPTLENGDRLYSIRVKKPKRNDIVVINAPDRPGSLYIKRVIGMPGDTVSSKDNQLSVNGKKIAEPYLNKKFATDEINKWASQQGLDASTIKFTNDFNIKTLSSTKSAKVPAGKYFVMGDNRLVSHDSRDFGFVDKSKIQSVVVWRYWPLNQMKLY
>NC_014334.2|WP_013245369.1|272335_273274_-|ADP-ribosylglycohydrolase-family-protein
MGIMESRLIHGTVGFAIGDALGLPVKGQNAAELTAAPVTTMKGYGTFNQPAGTYSDETGLALAGLDALQHGFDEQALIKAYQAWFTAGKYAPYGKRSPDIWPSIETALKTGQSVASPKEPGALIRILPFAFFAYQTFDTSLFQKAEGVKVLETFVHITNQDAENLVAAGIYMQIAVELLGATPDLPSAIATGTDKAGSYFGTTQPYQPIFEAFQAALADDKWPDESATDPISLLARTLKALQSKPDYHDAVLQTVNQGGATDTTGALVGGLAGLAYGYTSLPHRWCLMLAEYAQIVDLCRQAENSGFFPKYD
>NC_014334.2|WP_003563040.1|273653_275201_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSVLTVTGLSQRFLDKVLYQDASFQVNIEDHLGVIGQNGVGKSTLIKILTGTLTPDAGKIVWQKHLHVGYLDQYANLVPGQTVIEFLRTAFSDLYRKEAKMNQIYADYANHPDDDLLAKAGELQQELEAGDFYDLETTIQTVAEGLGITAMGMDHPVEALSGGQRSKLILAKLLLEKPDMLLLDEPTNYLDVSHIAWLTDWLQNFEGAFIVISHDFDFLENVTNAVLDIEFGQITKYTGTLKQAMRQKEADHETYLKAFAKQQETIKKTEAFIRKFKAGTRATMAKSREKQLARMDKLTPPGTRSKAHLAFPYAPVNRQILVDVNDLVVGYDKPLLQPMNFSVAKDQIIAFEGFNGVGKSTLLKTLLGLLPAISGNVEIADNVVFGYYEQELHWDQPKQSPVQYLEQRFPALTQKTVRQVLSRTALTSEEANNPLTMLSGGEQAKVKLADLMLQTTNILVMDEPTNHLDDDTKNALREGLQQYPGAVLLVSHEAGFYDSSWVDTVVNVEQLQVKA
>NC_014334.2|WP_003563042.1|275360_276101_-|class-I-SAM-dependent-methyltransferase
MTEDQAFWNAFAPDYAAAEQASRLPIAHDVIAWLRSTQLLPAHSAVDLAAGTGRYAVQMMPWVQELTLIDWSSAMLAFAKERMHQQADTKAQFIVADWRKLHKPLNADMLFVSQLPTLKPQDLKMLMNWANQTVVLNFQTAQSDALLEQAASLLGLQLPPVYQADPARMTSFKVWLTAQRIPFQSHSLTYEIEEQTTLSDLLPDLATPIGLKTAASLAKTITGHENTHVQVTDRLTYTYTQLVWHV
>NC_014334.2|WP_003568841.1|281467_281782_+|thioredoxin-family-protein
MAIEATKDNLKALTAEGTVVVDFWAPWCGPCKVLDPMLTALEQELPALKVVRYNVEKDHTLPSTMGIMSVPTLVIYQQGEAREKVTGVYPKDKLKRYFEQKLEA

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Crispr_ID: NC_014334_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014334_2

549467-549575

Orphan

Consensus_repeat	Method
GGTCCTTACACGTAGGTTTCTGGTCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014334_2

>merge|NC_014334|2|549467-549575|CRISPRCasFinder
GGTCCTTACACGTAGGTTTCTGGTCTGGCGAACGCGTTTCGGAGTCGCACAAGTAGACCGATCTTTGGCCACTTAGGATTGAGGTCCTTATACGTAGGTTTCTGGTCTG

>NC_014334|2|2|549467-549575|CRISPRCasFinder
GGTCCTTACACGTAGGTTTCTGGTCTG	GCGAACGCGTTTCGGAGTCGCACAAGTAGACCGATCTTTGGCCACTTAGGATTGA
GGTCCTTATACGTAGGTTTCTGGTCTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_014334.2\|WP_003587307.1\|562991_563708_+\|trehalose-operon-repressor	unknown	unknown	gnl\|CDD\|274116
NC_014334.2\|WP_013245353.1\|538609_539530_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NC_014334.2\|WP_013245472.1\|541897_543919_+\|WxL-domain-containing-protein	unknown	unknown	gnl\|CDD\|173886
NC_014334.2\|WP_013245483.1\|563933_565580_+\|alpha,alpha-phosphotrehalase	unknown	unknown	gnl\|CDD\|274115
NC_014334.2\|WP_013245477.1\|553762_554419_+\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003563579.1\|549698_550571_-\|methylenetetrahydrofolate-reductase-[NAD(P)H]	unknown	unknown	gnl\|CDD\|273212
NC_014334.2\|WP_013245473.1\|545136_546864_-\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_013245476.1\|550548_552834_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|235367
NC_014334.2\|WP_013245471.1\|541031_541733_+\|WxL-domain-containing-protein	unknown	unknown	gnl\|CDD\|372694
NC_014334.2\|WP_003662794.1\|559517_561299_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NC_014334.2\|WP_013245470.1\|540688_541048_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	unknown
NC_014334.2\|WP_003563571.1\|543994_544969_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NC_014334.2\|WP_013245469.1\|539835_540537_+\|WxL-domain-containing-protein	unknown	unknown	gnl\|CDD\|372694
NC_014334.2\|WP_003563577.1\|548492_549317_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180840
NC_014334.2\|WP_013245475.1\|547896_548445_-\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|227064
NC_014334.2\|WP_013245474.1\|546850_547645_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NC_014334.2\|WP_003573839.1\|557794_559513_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NC_014334.2\|WP_003573843.1\|561460_562705_+\|OFA-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340911
NC_014334.2\|WP_013245480.1\|556673_557357_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226381
NC_014334.2\|WP_013245479.1\|555608_556646_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_014334.2\|WP_003587307.1\|562991_563708_+\|trehalose-operon-repressor	gnl\|CDD\|274116	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B. subtilis-type. This family consists of repressors of the GntR family typically associated with trehalose utilization operons. Trehalose is imported as trehalose-6-phosphate and then hydrolyzed by alpha,alpha-phosphotrehalase to glucose and glucose-6-P. This family includes repressors mostly from Gram-positive lineages and does not include the TreR from E. coli. [Regulatory functions, DNA interactions].	1.84618e-92
NC_014334.2\|WP_013245353.1\|538609_539530_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	3.99796e-60
NC_014334.2\|WP_013245472.1\|541897_543919_+\|WxL-domain-containing-protein	gnl\|CDD\|173886	cd01951, lectin_L-type, legume lectins. The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.	9.96558e-25
NC_014334.2\|WP_013245483.1\|563933_565580_+\|alpha,alpha-phosphotrehalase	gnl\|CDD\|274115	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.	0
NC_014334.2\|WP_013245476.1\|550548_552834_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	0
NC_014334.2\|WP_003563579.1\|549698_550571_-\|methylenetetrahydrofolate-reductase-[NAD(P)H]	gnl\|CDD\|273212	TIGR00676, 510-methylenetetrahydrofolate_reductase., 5,10-methylenetetrahydrofolate reductase, prokaryotic form. The enzyme activities methylenetetrahydrofolate reductase (EC 1.5.1.20) and 5,10-methylenetetrahydrofolate reductase (FADH) (EC 1.7.99.5) differ in that 1.5.1.20 (assigned in many eukaryotes) is defined to use NADP+ as an acceptor, while 1.7.99.5 (assigned in many bacteria) is flexible with respect to the acceptor; both convert 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. From a larger set of proteins assigned as 1.5.1.20 and 1.7.99.5, this model describes the subset of proteins found in bacteria, and currently designated 1.7.99.5. This protein is an FAD-containing flavoprotein. [Amino acid biosynthesis, Aspartate family].	2.85486e-110
NC_014334.2\|WP_013245471.1\|541031_541733_+\|WxL-domain-containing-protein	gnl\|CDD\|372694	pfam13731, WxL, WxL domain surface cell wall-binding. The WxL motif appears in two or three copies in these bacterial proteins and confers a cell surface localization function. It seems likely that this region is the cell wall-binding domain of gram-positive bacteria, and may interact with the peptidoglycan.	2.0601e-11
NC_014334.2\|WP_003662794.1\|559517_561299_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.04053e-161
NC_014334.2\|WP_003563571.1\|543994_544969_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.24486e-25
NC_014334.2\|WP_013245469.1\|539835_540537_+\|WxL-domain-containing-protein	gnl\|CDD\|372694	pfam13731, WxL, WxL domain surface cell wall-binding. The WxL motif appears in two or three copies in these bacterial proteins and confers a cell surface localization function. It seems likely that this region is the cell wall-binding domain of gram-positive bacteria, and may interact with the peptidoglycan.	6.71049e-22
NC_014334.2\|WP_003563577.1\|548492_549317_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180840	PRK07105, PRK07105, pyridoxamine kinase; Validated.	1.54617e-67
NC_014334.2\|WP_013245475.1\|547896_548445_-\|ECF-transporter-S-component	gnl\|CDD\|227064	COG4720, COG4720, Predicted membrane protein [Function unknown].	2.07052e-12
NC_014334.2\|WP_013245474.1\|546850_547645_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.04239e-85
NC_014334.2\|WP_003573839.1\|557794_559513_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.67941e-147
NC_014334.2\|WP_003573843.1\|561460_562705_+\|OFA-family-MFS-transporter	gnl\|CDD\|340911	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.64808e-111
NC_014334.2\|WP_013245480.1\|556673_557357_+\|hypothetical-protein	gnl\|CDD\|226381	COG3863, COG3863, Uncharacterized distant relative of cell wall-associated hydrolases [Function unknown].	2.50052e-17

>NC_014334.2|WP_003563577.1|548492_549317_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MNTKSLIISQDLCGVGQVSMSVALPLAAGLGLTPYVLPTALLSSHTGGLGANTYLDLSAEMPGILKHWQQLQLQPDGIYLGYLGQKAADQWDRWLPKFHAPLVLIDPVMADNGKLYKGFDAAYVATMQQLAHRATVLTPNITEAQLLLDEKPTTLTDPSAVTALAKRLHAQFDSAVLITGVPFHKQIAVVGIDASGTTLALAQPKETGHYFGTGDLFAAALATGLLKGQNLRQAAATGMVAARLAIKATLATDADPKYGLNLAGVIPALSKQLP
>NC_014334.2|WP_013245475.1|547896_548445_-|ECF-transporter-S-component
MQTSHNTLKNIIFTGLFAAIIFIGISLLRIPIPAMVGRPFTHFGNPLMVLAILFLGGRLGGLAAVIGLGGFDLLNGYAATSWLTALEAIVMAIVVSALVKAFKHNDQPRNIIIIGILAGLTKIVTSYLTGVVEALMVGSVFKAAVVGAFLSLPATVINSIATAIIVPVLYFILRPLFRRFTN
>NC_014334.2|WP_013245474.1|546850_547645_-|ABC-transporter-ATP-binding-protein
MAEPIVTLSHIQKSFGSKEVLKDLNFTISPGSIVGYIGPNGAGKSTTVKMMLGLMQPDGGTIELFGQPIKPNDPSYKRRIGYVPESADVFDALTAREYLSLIGQLYGLSAADAEQKAFALADLVNLREAFDRRISSYSKGMRQLILIIASLLHNPDILFWDEPLNGLDANTVLVIEEVLQDLRDRGKTIFYSSHILDVVQKLSDRIIVLNDGMVVADGPFKSIAKEADTNLQQLFNDLTGFAEHGQKAQSFVDIVTGGESHETI
>NC_014334.2|WP_013245473.1|545136_546864_-|hypothetical-protein
MKLFKKTSLDTADPTDTAALPLPKTFAWLARFRPLLEKRGIQFDQLRLILATKGLLAARESSGLGSMFNKRKRGQDASIKTAFLWNLFFGLILGLLMFLPTSILTTFTLFMTIQLLTSFLAILTTYSSLILDPRDRSVFASRGVNDQTLSFARLINICFYLGMTLLAMGGPGLVMAGIHYGPVVALGGLIGLLLSGVLSLVMALFVYLLVLRFFDGERLRNMLNLVQILLMIGIYVGGQLPNLLPRSMSLFGMSISGQFNWLFLPAVPAWFVGLPMLFAGQVTVLSLTLTALSVVVPIALTLIFLHFSGVFEAYLEKLNQGDARTRKLGWWFRGVSALLTRPGEERTYFTLGWRVLGSERDYKLRVYPQLAYGIILPLIFVGGGLRDMPFSSAKHFIAYAGIGVIVALAPALVNLRFSSQPQAMAIFQYVPFTTHGLLLRGVVKAMFARLFLPPLLFITILTTALGGFDALLAGIAVIIFTYGMTLMMGWPLVGSQFPFASVYSANANFSGGALGFASIFFGVIVAMIVIGIGGFLGGWLFPLGLIVLGLTLGMLLGHFYRTNLRYELKIKTTQE
>NC_014334.2|WP_003563571.1|543994_544969_-|EamA-family-transporter
MPRTEAHLARHTNQKLKGVSFAVIGAIFWGASGIFTQTLFTDAGVKPLWLVGIRLFFAGLLLLLWSGVQEPRMFLAIWKNRHDAILMIVFAFLGMVPSQLTYFLAINAGNAATATILQFLGPVFILLYVAFATHQMPRRIDFVSITLALIGTYLLVTRGHLTGLSLAPAAVFWGIMAGVSQALYTLLPRTLLAKYDARAVTGWSMLLGSLPFLPQYVLHPNPLLTLPDFGAIAFVIVFGTMFAYLLVLGSLNYISPVATGMLSAFEPLTATTLAVTRLHIAFGPAEWLGGILIILNTLLQALPFNKIHHVQQRLTRQFSQKTKS
>NC_014334.2|WP_013245472.1|541897_543919_+|WxL-domain-containing-protein
MKKRCYLLACLGMLLCTLLAPVTSVGVAVTWPTTSGYPAPPSFGDVDGLFSPTMGDSSLLTDPTSGHAVGLEINKDQANRSGAIWSKAPMFDLDKDSSYTMYFYMGNKPKSGEGMAFVLAAKPAAPTKVDTGSLGVWGVDHLPPNSKPQEVADTALPNSFAMVVDTQKNGTGDPGGYEQLSDFKSYYFGTGYPGQANMYRIDYPYWMTWLYFKIDNPSEQYRFGLGTQKNLYETPANGKWHKLQLDWKKDNLGGGTLTAKMTITRTKDPDYATEVIKWTKNDIQKYFSQGSTDPAPRKLYLGFTGTTSNVFEPHVVAIGAMPEAATVNGTVALMRGAETVEATTHLKVDDVLHYDYTVNVKATSQATWPESGTATMNVPKGKYFDYLKADGTPAKPGDTLPIKVTIGNTDYQAQGKIQPDGNQIVVTNMPQVPKGTTATVKFSLPAKVKHHGLVQTTPVQDKPIGTVTGDGQTYDLKTPAGKDFLAYILDPETGELVLEKVPSFVFELKNGQTGYRNPTVMEMVKGLPTPTATNWDQANADQWLTNQQGREPTNSTGKVLSVKDTRPTKQGWHLTMQLSPFTLTDNSYVLGDNGNKLGGKATLVLTDQTAQIAAIKDNNNATPVKNMVAGGTDWSLGTQTGNVAAYLGIEPTATAKAGQYQATATWLLTNAPK
>NC_014334.2|WP_013245471.1|541031_541733_+|WxL-domain-containing-protein
MKIVTNFAIAFVTLMLAGFVGPHQSVMAADDLGPKKSSAQLTVDAGNIMIQQVPDLNFGGISVHEIVSGSFQRHPLKSNLVNPGPIKTATNANDGNATGLLQIADYRGTGAGWRLEAKMDAMTDGKGHFLAGYVDLVGSQLTASNPDINPINPAGSNVPRLNFAKDNTSVSSTVVWQADAETGAKPGQGQGDNQATIGTGTALTLVATNTNVTIAKGRYQGAITWTLSNAPKG
>NC_014334.2|WP_013245470.1|540688_541048_+|LPXTG-cell-wall-anchor-domain-containing-protein
MTRSIWRFLISLIIVFGVLGEGIMAAHQVRAATSIGEVVVIDDRPKPDKDHNAPGTEVSKPKEEPSVPPRQQVDRLPQTSEGGQTWYSLIGFALLMMSSLRLQLRLKRQDRGDDDENRD
>NC_014334.2|WP_013245469.1|539835_540537_+|WxL-domain-containing-protein
MKRVNYMSAGLIAMTFAGVMLPITSVFAADEPIKKTSVGEVRVGVDLDNPDPNNPDNPDGSKDILSLVKVPDLKFKSVSVEQLATGQQTLPLTINTVTDKPVKNEPAGNASDGNNQGLLNITDYRGTGAGWKLEAQAGELKNAAGQKLAGSLLLAGVAKTDETDNNPTAISQAELVLEGSGVQVWNAASGQGQGRNTGVFTSADTVLKLSQNTAAYGGKYQTAITWTLTNAPS
>NC_014334.2|WP_013245353.1|538609_539530_-|IS30-family-transposase
MAIITLIERSQIELMQHHTIQYIAATLGRSRISIRHELHRCPEGNYCAIIAQDHADTCRHRCGRHSILTPKLKRMVTEKLNLGWSPEMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
>NC_014334.2|WP_003563579.1|549698_550571_-|methylenetetrahydrofolate-reductase-[NAD(P)H]
MKINQCFKDHQVISFEVFPPRKNASNIALTPILNTLDAVKEADPDFVSVTFGANGNKPHMGTLEVAKLIKDEFDMEPVAHLPAAQLTREQVDAELRGFQDAGIDNILALRGDIPKSGRVSNDFPYACDLIEHIHQVGDFNVVAACYPEKHPESPDVVSDIHHLKEKVDSGASQLISQLFFDNQVFYRFRERAQLAGINVPIEAGIMPVINEHQIERMATMAGVNLPPKFVAMMQHFSGNKEAMRDAGIAYAIDQIVDLLVHGVDGIHIYTMDNPTVVKRIAAATQTIRNA
>NC_014334.2|WP_013245476.1|550548_552834_-|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MTTTIIGYPRIGEHRELKFATQKYFKHQITAQELQEQVKALRQHNWETVQAAGIDQIPTGDFSFFDNTLDVANLLNIVPKRYQALGLSPLDTYFAQARGYQGEAGDVKALAMKKWFNTNYHYLVPEFDQDTQIKVTDWQLFDQFEEAKALGINARPTLVGPYTLLKLSRFIDVTPDDFVTDLIAAYTDIIGRLHAAGAEWIQVDEPALVYDQTDADLALFERLYTPLLAQKQSAKVLVQTYFGDLTDSFDRISKLPFDGFGLDFVEGHANLDLLKTQGFPAGATLFAGIINGKNIWRTHYADALATIKTLAKITDKLVLSTSTSLLHVPYTLRNETHLKPEEKQYLAFAEEKLSELHELDAIFETGADHKAYQANVALFSKPRYAENKALNEKIAALTPADYTRTPERKTRLAIQAKAFKLPLLPTTTIGSFPQTAEVRRNRAKLRRHEITEEQYTAFNHKEEIEWIRFQEEIGLDVLVHGEFERNDMVEYFGENFGGFRFTDNGWVQSYGTRGVKPPIIWGDVYRTKPITVAETVFAQSQTDHLVKGMLTGPVTIYNWSFPREDLSQKTSVEQIALALEDEVLDLEKHGIKIIQIDEPALRENLPLRKKDWYPKYLDWAVPAFRLVGSKVKPETQIHTHMCYSQFGDIIKAIDDLDADVISFEAARSDFSLLDILKATHFQTHVGPGVYDIHSPRIPSKDEIVHIIHEILKRLPADHVWINPDCGLKTRDVPETKASLINMVAAAKQVRKELTHENQPVL
>NC_014334.2|WP_013245477.1|553762_554419_+|hypothetical-protein
MKKYGLVLILVLGLSPFFCKANFVHAQNFQKPIVEIMAEFQSKPKIVRTIQSVPIHVAAIRNFISKNETPVSSLDVMRSVYPGTPLSDLSSRTASFDDALTYFDHQKIKYTKTNGIPNYRIIVDELRAKRPILLKLKANTPYWPESESAILLYGIQVFPLPDGKANILYICRSLNHADQVTYSGGENNFNLLANEKQQDPTIQNIVYSWKATVYGFKK
>NC_014334.2|WP_013245479.1|555608_556646_+|hypothetical-protein
MKQLLIIVSLFVLMLVSGCVHKQQTKINYAVAVVETTATTKKSLITYYSKQLKPVKQQPLKYAALGSIWNNEIYSGGKVFLIPTGLTKMENEHKVLGIDKRNGDATSYRVDRTSIQGIAVSSSHIYTTSNLNAVNYITQVNRKSNKVKEIELPFDYVSLLMYRNGNLFVFSTNFNDIQHNRLFIYNDKLELKRKVDLAEVPQYIQKATFLNNKLVFTATFDPNEPKPAELGIVNLDSWQVSTFRLKESAANDIIAYKDKLIVANTDVVESRGKSISLIDLHSKEVTLYDLNTGVDRLALSGDTLYALGADELASFDAAHGFAIKKHIKLMFHEGLGRSALFVAKP
>NC_014334.2|WP_013245480.1|556673_557357_+|hypothetical-protein
MKKSLLFILPLALGIIAGQSQLVHAEGNLPQSYTDSTDPAKVFPKDKVDKMIQDAEQKPVLPDPGLPEHSRQKRNAGNQYPRRAGVILVTPDAYKGIPTGHAAIMRNTNSVVEALSDGVKIGHNNWDNSSASGKNRVYAVDVNATSNYQEGVVAEYCAAYKGKPYNWNFFNMDTRDSFYCSQLIRAGFLDSYKLDLNTSEFDAPFGKVMHPIEFVNSDKTTLIYRRG
>NC_014334.2|WP_003573839.1|557794_559513_+|ABC-transporter-ATP-binding-protein
MRVLFPYIKKYRWDVIWSVLAILIVAFATLWQPHLLQVIMNAIMKNDKQTVWINGLYLIGLAIIGIIGGIVNTIYAARVALGVATDLRADEYAKIQSLAYADVEKFSPSNLVVRMTNDINQVQQIIMGFFQQVTRIPILFVGAVILAIMTLPELWWVIAVMMILVFGVSFFSFSHMGKYFGRMQQLIERVNTLARENLMGMRVVKSFVQGANQIKTFAESSDEMRDVSVKIGNLFALLMPAFFLVANLAMAGSIWLIGQDITSHPSNLAAITSFINYLMQILFAIINGGFMLTFASRALVSLKRIQEVMDTKPSMTFVSGPHRDLDGAVEFDDVTFTYPGDEKPTISDISFKVKSGEMIGIVGATGSGKTTLAQLIPRLFDPDTGIVKVGGHDVRAVTEADLRKTVGFVLQRSTLFSGTIAENLQQGNPNVNLDAMRWAARIAQSAEFIERLPRTYNAEVEERSSNFSGGQKQRLSITRGVIGQPKILILDDATSALDAHSEKLVQEALAHELGDTTTIIIAEKISSIIKADRILVLDEGRLVGSGTHHDLVQHNDVYREIYATQKALEEGV
>NC_014334.2|WP_003662794.1|559517_561299_+|ABC-transporter-ATP-binding-protein
MKDLKNAGKFYAHYLKPYWIEFLITTILVGISTWAIVVAPTYMGRAIEELATYVQQWMNPATRAQATFTTFNHTLAIFVLLYIIDATSILISSLLLSKISGYSTGTMRVGLFRKMQRMKVNYFDSHSDGDILSRFTSDLDNIFNAMNQALIEIFLSGAQFIGIIWMMFTQNATLAWITMASTPVAVGLSAFVMHQASVSVDRQQDDIGRLNGYINEQITGQKMLITNGLQQESVAGFQPYNAAVRKSNLRGQIWSGILNPLLMGLSLLNTAIVIFAGSWLALNGSLSQGAALALVVVFVNYAQQYYQPIVQLTSLFNMIQLAITGARRITEVREQPDEVDPPEGKTLDGLKHELLIDNVHFSYIPGKEILHGVTIKVDKGEMVALVGPTGSGKTTVMNLLNRFYDVDSGAITFDGVDVREFKLASLRQNVGIVLQDPQLFSGTIRDNIRFGDPDADQARVEAAAKQANIHDFIVSLPEGYDTFVSDEQSVFSAGQKQLMSIARTILTNPRLLILDEATSNVDTVTEAKIQAAMDNVIQGRTSFVIAHRLKTILNADKIVVLRDGNIIEEGSHEQLLAQNGFYAELYHNQMVFE
>NC_014334.2|WP_003573843.1|561460_562705_+|OFA-family-MFS-transporter
MSKRRYLVAIGGILLHLMIGSVYAWSVFTGPIAKQTGWALSSVTVAFSIAIFFLGMSAAFMGRLVERFGPRLTGTVAALLYGSGILLTGLAVQLESLPLLYIGYGVVGGLGLGAGYVTPVSTIIAWFPDKRGLATGMAIMGFGFAAMLTGPIAQNLIAGIGLVPTMYVLGTAYLLIMLTAAQVIRKPRPGEVPAADIAKSVSLTGTAMTANQAVKTRSFRYLWLMFFINITCGIGLVAVASPMAQQQTGMSAATAAMMVGVVGLFNGFGRLAWATLSDLIGRPLTYTLIFTVDVAMLAGILVFSSPLLFGIALCLIMSCYGAGFSVIPAYLGDVFGTKQLGAIHGYVLTAWAVAGVVGPTLLSLSDQYFHSYTYSLIFFVALELVAFILSIRIRRQFSVVARDEKVTDSLERQH
>NC_014334.2|WP_003587307.1|562991_563708_+|trehalose-operon-repressor
MRKYDVIYQDLKDKIEAEIYTTGSLLPSENTLQDMYQASRDTVRKALRLLKDDGFIQSQKGRGSIVINRQEYVFPVSGVVSYAELAKQLHLQTRTVVLANHFAALPAKSFKDVDPDVEVKQMRLLKRVRYLEKEPDIIDIDYLDPRVVPPIPESVARDSLYAYLEGQIGLEIAYATKEITVETATEEDRRYLNLPEGAMVVVVRSCSSLADTRKFQYTESRHRADRFKFHDFARRTRP
>NC_014334.2|WP_013245483.1|563933_565580_+|alpha,alpha-phosphotrehalase
MGFHNKVIYQLYPKSFYDSNGDGVGDLRGIIDKIDYLKSLHVDMIWFNPFFVSPQYDNGYDVADYRQIDPRFGTMADFDELAKKLKAAGIDIMLDMVLNHTSTEHAWFQKALAGDKHYQAYYYIRPPKPDGSLPTNWESKFGGPAWAPFGDTGNYYLHLYERRQADLNWHNPAVRQEAAAIINFWRAKGVHGFRFDVLNVIGKADKLVDAPPSVASKTLYTDTPIVQDYLKELAANSFGQGDNRVTVGEMSSTTIANSIAYTKPDNHELSMVFQFHHLKTDYKNGEKWSKVPYDFNALRDILHTWGQGLDQGGGWQALFWNNHDQPRAINRFGDVGQYRVKSAELLAAAIHLSRGTPYIYMGEEIGMTDPDYTSMADYVDVEAKNAYAALLGKGMSEKEAFGIILAKARDNSRTPMQWDASDHAGFTTGTPWLRPTNQAAINVQAELAHGEIFKFYQQLIALRKQYPVISDGSYTPFGTEIDRLYAYIRTYGTQQLLVLNNFSDKTMTVPLPEKFQTAKVLITNEATLTPTATMTLPPYATIGLLQKA

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Crispr_ID: NC_014334_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014334_3

635522-635637

Orphan

Consensus_repeat	Method
CTTTGGTCGTTTAGGTTCGAGGTCCTTATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014334_3

>merge|NC_014334|3|635522-635637|CRISPRCasFinder
CTTTGGTCGTTTAGGTTCGAGGTCCTTATGCGGAGGTTTCTGGGCCAGTTTGCGCGTTTCGGAGTTCAGCAATATCAGGCAGGGCTTTGGTCGTTTTAGGTTCGAGGTCCTTATGC

>NC_014334|3|3|635522-635637|CRISPRCasFinder
CTTTGGTCGTTTAGGTTCGAGGTCCTTATGC	GGAGGTTTCTGGGCCAGTTTGCGCGTTTCGGAGTTCAGCAATATCAGGCAGGGC
TTTGGTCGTTTTAGGTTCGAGGTCCTTATGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014334.2\|WP_003573971.1\|640139_640664_+\|DUF308-domain-containing-protein	unknown	unknown	unknown
NC_014334.2\|WP_003659923.1\|640896_641529_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227169
NC_014334.2\|WP_003659920.1\|636539_636773_-\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003563739.1\|628013_628532_-\|galactose-6-phosphate-isomerase-subunit-LacB	unknown	unknown	gnl\|CDD\|181506
NC_014334.2\|WP_003659914.1\|625920_626859_-\|tagatose-6-phosphate-kinase	unknown	unknown	gnl\|CDD\|237405
NC_014334.2\|WP_003563745.1\|630230_630857_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|372595
NC_014334.2\|WP_003563741.1\|628576_629005_-\|galactose-6-phosphate-isomerase-subunit-LacA	unknown	unknown	gnl\|CDD\|181505
NC_014334.2\|WP_003563775.1\|638429_639215_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NC_014334.2\|WP_003573966.1\|636069_636546_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107228
NC_014334.2\|WP_003659917.1\|632038_635164_+\|SMC-family-ATPase	unknown	unknown	gnl\|CDD\|223496
NC_014334.2\|WP_003563758.1\|635262_635406_+\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_013245323.1\|641647_642403_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225511
NC_014334.2\|WP_003563733.1\|625218_625899_-\|DUF4867-family-protein	unknown	unknown	gnl\|CDD\|379783
NC_014334.2\|WP_003563777.1\|639882_640062_+\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_013245516.1\|637115_638219_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NC_014334.2\|WP_003563743.1\|629009_629786_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NC_014334.2\|WP_003563737.1\|626973_627975_-\|tagatose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|183502
NC_014334.2\|WP_003563776.1\|639217_639886_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|376808
NC_014334.2\|WP_003563746.1\|630917_632039_+\|exonuclease-SbcCD-subunit-D	unknown	unknown	gnl\|CDD\|223497
NC_014334.2\|WP_123796487.1\|642378_643275_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853

Protein	Function_ID	Function_description	E-value
NC_014334.2\|WP_003659923.1\|640896_641529_+\|hypothetical-protein	gnl\|CDD\|227169	COG4832, COG4832, Uncharacterized conserved protein [Function unknown].	6.76065e-11
NC_014334.2\|WP_013245323.1\|641647_642403_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.18451e-08
NC_014334.2\|WP_003563739.1\|628013_628532_-\|galactose-6-phosphate-isomerase-subunit-LacB	gnl\|CDD\|181506	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed.	6.20591e-104
NC_014334.2\|WP_003659914.1\|625920_626859_-\|tagatose-6-phosphate-kinase	gnl\|CDD\|237405	PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional.	1.6225e-143
NC_014334.2\|WP_003563745.1\|630230_630857_-\|HAD-IA-family-hydrolase	gnl\|CDD\|372595	pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase.	8.24385e-35
NC_014334.2\|WP_003563741.1\|628576_629005_-\|galactose-6-phosphate-isomerase-subunit-LacA	gnl\|CDD\|181505	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed.	1.14806e-74
NC_014334.2\|WP_003563775.1\|638429_639215_+\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	1.99527e-22
NC_014334.2\|WP_003573966.1\|636069_636546_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	8.90883e-46
NC_014334.2\|WP_003659917.1\|632038_635164_+\|SMC-family-ATPase	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	2.08258e-77
NC_014334.2\|WP_003563733.1\|625218_625899_-\|DUF4867-family-protein	gnl\|CDD\|379783	pfam16161, DUF4867, Domain of unknown function (DUF4867). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various human gut Firmicutes and a few eubacteria species. It is also amply represented in human gut metagenomic datasets. Distant homology analysis and marginal HMM overlaps suggest this family is a distant homolog of Ureidoglycolate hydrolase pfam04115, but this prediction is not verified by experiment, therefore the function of this family is still unknown.	8.17986e-88
NC_014334.2\|WP_013245516.1\|637115_638219_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	1.3412e-123
NC_014334.2\|WP_003563743.1\|629009_629786_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.34504e-74
NC_014334.2\|WP_003563737.1\|626973_627975_-\|tagatose-bisphosphate-aldolase	gnl\|CDD\|183502	PRK12399, PRK12399, tagatose 1,6-diphosphate aldolase; Reviewed.	0
NC_014334.2\|WP_003563776.1\|639217_639886_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|376808	pfam02525, Flavodoxin_2, Flavodoxin-like fold. This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) EC:1.6.99.2. These enzymes catalyze the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species. This enzyme uses a FAD co-factor. The equation for this reaction is:- NAD(P)H + acceptor <=> NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy. The family also includes acyl carrier protein phosphodiesterase EC:3.1.4.14. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP. This family is related to pfam03358 and pfam00258.	4.81778e-31
NC_014334.2\|WP_003563746.1\|630917_632039_+\|exonuclease-SbcCD-subunit-D	gnl\|CDD\|223497	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair].	4.36447e-49
NC_014334.2\|WP_123796487.1\|642378_643275_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.10657e-39

>NC_014334.2|WP_003563758.1|635262_635406_+|hypothetical-protein
MASLSKEQKKALIAKVEKERQDHPEKKSKKSGFETIDEEAERLESEN
>NC_014334.2|WP_003659917.1|632038_635164_+|SMC-family-ATPase
MQLKQLHMQFFGPYADAVVDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGERDGGQMRSNFAGNSDLTKVTLTFDHDGKHYLIERQPPQLQSKKRGDGLTEVKAKVLLAISSDEKQVAEYRKKNQVQEQLDAVLHLDASQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGTQLIQRWQTAMLAQMKAKGAAIQDQERMLDVLMSQFDFETAPDEHATMADKLSLMRATVASQAKVVTARQATAAQSHQRYQEAQTALQQGQQLAQAFTEREQAATALAKLAEQKQTHQKQLKQIEQLTWVQQHENAAQRVQKAGQDLKAAIVQSEQTQAALTTTEQKFSLDKQALARLQAKSDQIEAQKKQLNSLQAVQQQLTAIAEQNKQVIKQAAIVNEAELALTHAQQQLTDAQTVKTQQQTSLDNLGLDELITTVNTQRNLLAALVPQAANYQEAQADVAQLSMAIKKTQVTLEQAETQVAATTSHLNKLQQTQIRQQIAHLAAKLEPDSPCPVCGSTSHPHPALVVDEPLVSEAALKQADQERQKAAARKTMVETQLANLETQLKTAKAKTAQARQAFTEHWQEQAKLIAGVADKTGILQQLTALKTLAATNEHQLTEAQTEHAALQVALKKSDKAITTGTTKVQQCEASLNTARIDAAEAESALKTMQKNLPAEATDLATVAAQATTLQTTITTYQAQLQEAQARVNALDRQLAGLQADEKHAAAQVTALTKEQAEAKATFTIAVTEYFGADGKQRFAELQLRVSQLPLLNEQVQTYEHTQLKQQTLLDAANKTIGTQAQPQLDQLEAEATAAETTATNDQTALIKISQAHDAAEKLAKQAATIFTANQTALAAYADLQTLATVMNGNGPKKLSLERYVLQAYLQEILNVANSRLQVLSNNRYQFVLHTSLGTQKIHSGLEIDVYDDQVGEKRAVQTLSGGESFIAALSLALALGEVIQQESGGINIDALFVDEGFGSLDANSLDVAMNALESLEGESRLIGIISHVTELRDNIPDQLQVEPAGTGRSRLKILHSA
>NC_014334.2|WP_003563746.1|630917_632039_+|exonuclease-SbcCD-subunit-D
MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVETAKQHKVDAIVIAGDLYDRALPSEAAVSVLDNMLIKLNRDHGYPLLVISGNHDSAVRLRTGRAWYAATKMFVNTQVAEAFTPIELDGVQFFLLPYFEPFAVRDYFQDKTITNVAQAIRPIVAKMKTLFKPDMRHILVSHFFAAGSDHSASETKVNVGGLDAVPLDDLAAFDYVALGHLHNHHALHGEPKIQYSGALLKYAVSEAHQEKGVYIVDTETMDREFVPLKPKHDLIELKASYADLTAPAYYQQQDRDAYIGIDLTDTQVIPNVMAQLRQIYPRIISLRRENGVNAIKPLQERQRDLDPMSLLQTFFKDMTQDDLSAAQIKWAKAGLTTAKKEQA
>NC_014334.2|WP_003563745.1|630230_630857_-|HAD-IA-family-hydrolase
MNTFIFDIDGTLLDNVEAYLYGLQKTLRRHGREVPIHELTWTNGRAGVDSLAELGFSAAEIPEVHEQWREDSKEFLTDIAWFPGMQHALNQLKQTYKLGLVTSKDKTQFIEEDKKFHFSPYFDAIVVAGEAKRNKPFGDPITLARERLGSEPASTIYIGDTPTDAQAAADAKVAFALAGWTTPPSNEVMPRVAVLQQASDLLTLPTLA
>NC_014334.2|WP_003563743.1|629009_629786_-|DeoR/GlpR-transcriptional-regulator
MLKDERLLTIRNLVDRKGIVTVNEIGESLGVSTMTVRRDLEELADQKELVRIHGGAQSTNFKPLTELSRNEKRSIHVNEKRKIAATIAALIIPGDTIYIGPGTTNEMIAQYLKKPDVRIITNSLPVFQSFQDRADFFSLQLIGGRLRARSGAFIGSLANEMLAHLTTTKAFISVNGIADNHISNASPEEGQTQRIALDNAGMKLVVADHFKLNRQDFYSFYDLDQTDGLITDPGISRDDLQHYNTFTHVITDKTNKGE
>NC_014334.2|WP_003563741.1|628576_629005_-|galactose-6-phosphate-isomerase-subunit-LacA
MDVIIGADKDGFAMKEQVKKYLEDHQYRVKDMTPEPAEDFVDSSLAVTKELLGGDAHKAIMFDRYGVGSAMASNKVKGMVTAVVEEENTAHMTAEHNGAKAIAIGTGITGYDRALVIIQRYLDTEYAGGRHQIRLDMLEKMI
>NC_014334.2|WP_003563739.1|628013_628532_-|galactose-6-phosphate-isomerase-subunit-LacB
MIIAIGNDHIVTMQKIEISNMLKDMGYTVIDEGTYDTHRTHYPIYGKKVAEDVADGRADLGIVMCGTGIGISTAADKNDGIRAAMCDDVTSAVYAREQLNANVLGIGGATVGIHMIQDIVKAYLDATYKETPENKKIIDKIDNIAKPNPEQKDNPHFFDTELEKWAEGVYHD
>NC_014334.2|WP_003563737.1|626973_627975_-|tagatose-bisphosphate-aldolase
MTVTLTAGQYKHLQQLSDDNNVISALAIDQRGSLKKMLAAAANKPADETTIVDFKKAVSEELTKYASSILLDPEYGLPAAKVRAPQAGLLLSYEKTGYDATEPGRFPDLIDDQSALRIKNEGGDAVKFLLYIDPDEPDAINDRKYAFVERVGAEAKANDLPLFLELVSYDGTLNETGTAAWAKVKPDKVIKITKEFSKPQYNVSVLKVEVPVDQKFVEGFTDQGVTPVYTKEEAAKYYKAQSDATDLPFIFLSAGVSNELFLEELKFAKQAGSTFNGVLCGRATWKPGVKPFAAEGEAAGKAWLETEGKANIDRLNKVLAETATPWTDKVEHA
>NC_014334.2|WP_003659914.1|625920_626859_-|tagatose-6-phosphate-kinase
MILTVTLNPSIDVSYPLEHLKIDTVNRVKTVRKTAGGKGLNVSRVIHMLNHEITATGFIGGYFGKWLENQLDRDGIDHDFFPIDAETRSSIAMLHDGGEQTEILEAGPTIAAEDAEKFLSHFDSLLDKSDLITISGSMPQGLPADYYTQMIAHAGQKNVKVLLDTSGATLKSALEAPVKPLLIKPNEEELGGLLNREVDKTDYAALKQDLIDPIFDGVDWIVVSLGAAGAFVKHLDKFYHAAIPKIKVVNPVGSGDSTLAGLAMGIHDGKSDEDIMKTAMTTGMLNTMEAETGFVNPAKFDEYFAKVTIESY
>NC_014334.2|WP_003563733.1|625218_625899_-|DUF4867-family-protein
MSTIDQLRTLNPDKTIHSLDEAAFADYGVTYAQYDVSELKAFMDQHVTIPAPSEANLYIPSNPDMERIPVVQQIGRDVYAGLPIEAGECAGHADALTAVEFHQGSEVNVFFTDVVMVIGKRGQMHDGQFNAEKDAKLFFVPAGTVVEFFSDTLHYSPCEAHASGFKFIVMLVRGSNQPLPADYHTDNKLIVKQNKFQVVHASRTDKIKQGIQVGVTGELVQVKHLN
>NC_014334.2|WP_003573966.1|636069_636546_+|Hsp20/alpha-crystallin-family-protein
MANEVLNRRNNELMNNVNDPFFDNLARRFFGPVSDWMDWATPAITSTAVNGLLTDVKETKDAYEVHVDVPGIDKNNIKMNYHDGVLSINVHKDDITDHADKNGNVMMSERNYGTMSRSYQLPNVDASNIKAAYQDGVLNITMPKLTESKESGHNIEIQ
>NC_014334.2|WP_003659920.1|636539_636773_-|hypothetical-protein
MFRFLIAPFRALQKNHPNDHTYRWDDFNDSMITATAAILIDFCLLTHGFCPLTAEVPLLFMLAMQSVNLGSADDEHY
>NC_014334.2|WP_013245516.1|637115_638219_+|A/G-specific-adenine-glycosylase
MTNKLINWPPEKVAAFQKALLNWYDQHARQLPWREDHDPYHVMVSELMLQQTQVQTVIPYYERFMNQFPTVGALAKAPEAEVLKAWEGLGYYSRARRLQQAAKQIVADYGGVWPQTSETLQTLSGIGPYTAGAIASISFGEPVPAIDGNAFRVFARLFKVDADIARPQTRQIFFDLIQPLMPKDRPGDFNQAVMDLGSSYMSANHPDPAHSPVRDFDASYRDGVVSAYPVKTKKPRPVLHRYFALVIRSEKGYLLEQRPSTGLLADLWMFPLVDMADLESTMMSAQLDEVSTLFAASSGMQLTFADLGAKTVKHTFTHQQWQLTLIGVETAASDLSFLPARWVKADHFSELALPTVQKKLNAALGMN
>NC_014334.2|WP_003563775.1|638429_639215_+|alpha/beta-hydrolase
MTVKVTRDIAYGDAALQKLDFYEPEKSNGAAILDIHGGGWFRGEKNKEGEMAERFAALGYTVAVPNYRLAPEAFFPAARDDVLAAFSWLREHTKGLQLGVFGSSAGGSLSVDVGLAEGVPTVSWSGIFDIRQWFADHPAVVAQPDTKTDFVKTASAKIDQGGRNDPFYKWFILNYVDSDETKFPEVEPFDRLTAQAGPLYLANSQEEIIPISGIYQLAHAAEKLGLPVTLQSIPGGQHAEGYLDEAWQGTVAFFAQYLLKG
>NC_014334.2|WP_003563776.1|639217_639886_+|NAD(P)H-dependent-oxidoreductase
METLVVVSHPEIEKSDTQQFLKASAASLSQVVWHHLDSRLPFDVTAEQQAITSADRLIFQFPLYWYMAPASLHQWLTDVWLKQFVYDARGGLLHGKSLGFVVTFSQPATAYQLGGSVGFSISQFLTPYAALAAKTGLTLLPPLTIAQFANQTDLEHQQLLVRYQQYLTLDHPDRPDEQAQWFIDRLSGNADTQLLADQLAAQTDDIDRLRLTLHELKAGESE
>NC_014334.2|WP_003563777.1|639882_640062_+|hypothetical-protein
MTTDEQWLVNAAAVQEKQATSYENAAFFRALQAFVTQQAKRRESLEGEIDGRSWNHEQW
>NC_014334.2|WP_003573971.1|640139_640664_+|DUF308-domain-containing-protein
MQTMFDRLQRWSWLRGLLMILIGAWILIAPRQVYRSFLWIVAAVLIIAAIPKLIDGFSARKASGTYGTSLFTGGFYLLLALMVPVIVRPLMSLGPLLLGIVLMIYGVNKILSARNRQQFVNVSVWPTVIYGVVLLIMGFIMALNPFRTVMMVFSFFGGLLVVMGILQLFTRPRA
>NC_014334.2|WP_003659923.1|640896_641529_+|hypothetical-protein
MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERISEGPDAGIDIPNFKAYHPYPLQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLHFEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIAHIQTVINRDHLVPKFDDRHREVYLEGYQGEVPVLYRVPLDENFGEVGDEQVAYN
>NC_014334.2|WP_013245323.1|641647_642403_+|helix-turn-helix-domain-containing-protein
MRRKGIRYSLEEKIQFVNRVLSGQSLMDVQRSGGPRHVALGRWVHSYQQWGAAGLVPKKRATRRHPRKHKTYSREFKLQIVQEYLAGGTSYPKLCAEYDISNPAVVYQWVSLYNSGQLLQTTRGSAPMTKGKKTTYVERIEIAQWIIAHDMDYQGAIKHFGVSYGQVYSWVKKFRESGEEGLKDRRGQHKPENTLDENQRLKLENKQSKARIDYLETENALLKKLQNVERRSAGNNTDNTNILPFKNSPKR
>NC_014334.2|WP_123796487.1|642378_643275_+|IS3-family-transposase
MQELTQEVTRVTKRYHSVSLCCQIFDIPRSAYYKWLHREPTKQDIMNTELVRFIKKLEEDNHYIYGVDRLRMIINQETDYHVNPKRVRRLMQDNGIQCSIRQKKHDRVAEKKEYILGNKLLNQDGSHAFHPTRPNEVWVTDCSELTYGFNSECHLRLSAIKDLYDHSIVAWEVEPSETATLVTQTFRAAAEAEETLPELLHSDQGSGYTSRLYNTELAGSGVIHSMSRPGTPGDNSPMESLWSHAKTEYFDFVHANTYEEMMQFIEEYVLWYNGDRHQETLNGMTPAEYRNHAIETAA

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Crispr_ID: NC_014334_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014334_4

1743109-1743229

Orphan

Consensus_repeat	Method
CGGTTTCTAAACGCGTTCGCCACCCCAGAAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014334_4

>merge|NC_014334|4|1743109-1743229|CRISPRCasFinder
CGGTTTCTAAACGCGTTCGCCACCCCAGAAACCAACGTGTAAGGGCCTTGGTCGCAATGACCATTGTGCGGCCATCCCACTTACACTACGGTTTCTAAACGCGTTCGCCACCCCAGAAACC

>NC_014334|4|4|1743109-1743229|CRISPRCasFinder
CGGTTTCTAAACGCGTTCGCCACCCCAGAAACC	AACGTGTAAGGGCCTTGGTCGCAATGACCATTGTGCGGCCATCCCACTTACACTA
CGGTTTCTAAACGCGTTCGCCACCCCAGAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014334.2\|WP_003566065.1\|1741064_1742204_-\|M20-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349944
NC_014334.2\|WP_003566078.1\|1747787_1748225_-\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003566081.1\|1751329_1752487_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NC_014334.2\|WP_003566083.1\|1752706_1753534_-\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NC_014334.2\|WP_003566070.1\|1744071_1744524_-\|SprT-family-protein	unknown	unknown	gnl\|CDD\|235290
NC_014334.2\|WP_003566085.1\|1753536_1754730_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NC_014334.2\|WP_003566048.1\|1732186_1733941_-\|pyruvate-oxidase	unknown	unknown	gnl\|CDD\|213733
NC_014334.2\|WP_013245838.1\|1740186_1741005_+\|aldose-1-epimerase	unknown	unknown	gnl\|CDD\|185696
NC_014334.2\|WP_013245837.1\|1736706_1737888_-\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|180261
NC_014334.2\|WP_003566061.1\|1739510_1740074_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
NC_014334.2\|WP_003566056.1\|1738232_1738532_+\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003566079.1\|1748361_1751022_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
NC_014334.2\|WP_003566068.1\|1743614_1744079_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_014334.2\|WP_003566072.1\|1744665_1745418_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224026
NC_014334.2\|WP_003566058.1\|1738532_1739363_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NC_014334.2\|WP_003575994.1\|1735414_1736695_-\|hydroxymethylglutaryl-CoA-reductase,-degradative	unknown	unknown	gnl\|CDD\|153082
NC_014334.2\|WP_003566067.1\|1742282_1742888_-\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|227029
NC_014334.2\|WP_013245836.1\|1734264_1735431_-\|hydroxymethylglutaryl-CoA-synthase	unknown	unknown	gnl\|CDD\|213655
NC_014334.2\|WP_003566074.1\|1745410_1746310_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226605
NC_014334.2\|WP_003566076.1\|1746306_1747302_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380548

Protein	Function_ID	Function_description	E-value
NC_014334.2\|WP_003566065.1\|1741064_1742204_-\|M20-family-metallopeptidase	gnl\|CDD\|349944	cd08659, M20_ArgE_DapE-like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like. Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE) like family of enzymes catalyze analogous reactions and share a common activator, the metal ion (usually Co2+ or Zn2+). ArgE catalyzes a broad range of substrates, including N-acetylornithine, alpha-N-acetylmethionine and alpha-N-formylmethionine, while DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. Proteins in this family are mostly bacterial and have been inferred by homology as being related to both ArgE and DapE. This family also includes N-acetyl-L-citrulline deacetylase (ACDase; acetylcitrulline deacetylase), a unique, novel enzyme found in Xanthomonas campestris, a plant pathogen, in which N-acetyl-L-ornithine is the substrate for transcarbamoylation reaction, and the product is N-acetyl-L-citrulline. Thus, in the arginine biosynthesis pathway, ACDase subsequently catalyzes the hydrolysis of N-acetyl-L-citrulline to acetate and L-citrulline.	1.94339e-127
NC_014334.2\|WP_003566081.1\|1751329_1752487_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.83637e-45
NC_014334.2\|WP_003566083.1\|1752706_1753534_-\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	0
NC_014334.2\|WP_003566070.1\|1744071_1744524_-\|SprT-family-protein	gnl\|CDD\|235290	PRK04351, PRK04351, SprT family protein.	5.42742e-83
NC_014334.2\|WP_003566085.1\|1753536_1754730_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	8.24724e-43
NC_014334.2\|WP_003566048.1\|1732186_1733941_-\|pyruvate-oxidase	gnl\|CDD\|213733	TIGR02720, Pyruvate_oxidase, pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name. [Energy metabolism, Aerobic].	0
NC_014334.2\|WP_013245838.1\|1740186_1741005_+\|aldose-1-epimerase	gnl\|CDD\|185696	cd09019, galactose_mutarotase_like, galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.	4.6714e-24
NC_014334.2\|WP_013245837.1\|1736706_1737888_-\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	1.64753e-180
NC_014334.2\|WP_003566061.1\|1739510_1740074_-\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	1.30041e-36
NC_014334.2\|WP_003566079.1\|1748361_1751022_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_014334.2\|WP_003566068.1\|1743614_1744079_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.67331e-15
NC_014334.2\|WP_003566072.1\|1744665_1745418_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224026	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	7.00008e-96
NC_014334.2\|WP_003566058.1\|1738532_1739363_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	2.188e-08
NC_014334.2\|WP_003575994.1\|1735414_1736695_-\|hydroxymethylglutaryl-CoA-reductase,-degradative	gnl\|CDD\|153082	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR). Hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR), class II, prokaryotic enzyme is a homodimer. Class II enzymes are found primarily in prokaryotes and Archaeoglobus fulgidus and are soluble as they lack the membrane region. Enzymes catalyze the synthesis of coenzyme A and mevalonate in isoprenoid synthesis. Bacteria, such as Pseudomonas mevalonii, which rely solely on mevalonate for their carbon source, catalyze the reverse reaction, using an NAD-dependent HMGR to deacetylate mevalonate into 3-hydroxy-3-methylglutaryl-CoA. Human and bacterial HMGR differ in their active site architecture.	0
NC_014334.2\|WP_003566067.1\|1742282_1742888_-\|ECF-transporter-S-component	gnl\|CDD\|227029	COG4684, COG4684, Predicted membrane protein [Function unknown].	7.14562e-17
NC_014334.2\|WP_013245836.1\|1734264_1735431_-\|hydroxymethylglutaryl-CoA-synthase	gnl\|CDD\|213655	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.	1.85604e-155
NC_014334.2\|WP_003566074.1\|1745410_1746310_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|226605	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only].	4.77747e-94
NC_014334.2\|WP_003566076.1\|1746306_1747302_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380548	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This group includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type transport systems that are predicted to be involved in the uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); its ligand specificity has not been determined experimentally.	3.33545e-104

>NC_014334.2|WP_003566067.1|1742282_1742888_-|ECF-transporter-S-component
MTQRGKAYNIAIIGILGALIILQAYIPMVGYVQIFPAWPAISTIHLTVIIGGIVLGYGGGASLGLLWGLTSLIRAYTSATDPVTLLLFRNPIIAIVPRVMVGLVAAFIFHQLFKKKQTPLAQTVKMVFAGVVGALTNTLLVIGFTWLMFASKAAQIVPGADATNLGWLLMTALAINAVAEALLGGIVTPILGHALLRFRRK
>NC_014334.2|WP_003566065.1|1741064_1742204_-|M20-family-metallopeptidase
MTEEEQVVDLLSAMVKIPSVAAKEGQVADLIETFLAPELKAGLIKRERISYAPGRDNLVLTIGNPNAQRWLGVDGHMDVVDPGNVNKWQFPPFSAHVEDGKLYGRGATDMKSGLAAAVVAFKQAAHEKLDHGIQLMATVGEEVDNDGARQLSAAGYGDRLTGLLVAEPGNSNVDAAERGIIDYTLTAHGKAAHSSRPDLGANAIHGLFAFANAALTATAPLQAKEDPILGHATHNIDIIHGGNQINSIPESAYLRGNIRTTMIADNDAFIAALKQAAKTTVPKGVRLSLSIDSVLGAAAASPDNDLIQLVQTARQRAGLNRGQVAYRTGITDAALFYHDGLDLAIYGPGNETSHETDEYVTLKDVFDSVKVFKDVFMNY
>NC_014334.2|WP_013245838.1|1740186_1741005_+|aldose-1-epimerase
MQLSAKIFAKVGSERITQYSLVNDHQMTLRFLTFGARVQQVRLPNAAGDDPNLLLGFVTLEDYLHQPGYLGAFTGPLQAADAELAPGSWQNWNWAVKTSQETDLAITFTLTLPENADGQPGQRELSITHRLTNDNLWQIDMQVATTADLKIHPRLNLPWMLTADPAQTMLSAKLTADEHVTPVPKTARCETAQRYSLAAADWQLAYLSDASFTRIDSYAGINSENNFNGILGQPNVAVGFSPEMNQDALPWVLPAGATWRHHAEFHLSSNAN
>NC_014334.2|WP_003566061.1|1739510_1740074_-|restriction-endonuclease
MRTLLKKAYQLLWGLFILALAYSFWARSFLPRQLRQYGDPASFGIISLFVVINAIMLYHHHFRFRDLKMETVDIMEGEKFESFCAYLLKRNGFNHIQLTQASGDQGIDIIARKKGKTIGFQCKRYTGFVGNKAVQEVWAGHHFYQLDEAAVITNSEFSDSAIALADDLGVMLIDRKKLRRLMRRLPS
>NC_014334.2|WP_003566058.1|1738532_1739363_-|sugar-phosphate-isomerase/epimerase
MLLGLKASTDQRQIRDRLQYHPDVFEFHLTENDFTEAGWSHFVQMAALVQSLVPTVVFHHPMRFRGQRNELAMNPTKYPTRYDFLMTSSVKLMNFAKKANATALIHGGYRVDTPGDYAGWTDVGKAQDVALARMIAFAQEAPGHVVFENSMSPIFRYGDPTFEDRLLRWHLPLAYDTSHTFIVLHGDNDRLMASLAHLRPLIRHYHLVDSMGQTHDSLPLGRGRIDWARVLPLLNQNASRIYEIGLKDQFDCREMIESHHYLESVAKRLAATKHPA
>NC_014334.2|WP_003566056.1|1738232_1738532_+|hypothetical-protein
MRVTDLLALLADQNKNASVLLDTKPTPSRFDDFKLTTVNDQPQLVFQPNPERKAALRVWELQLLLNQPDLQQRFVYLADVDEPRALFGFVKRQIGLLLN
>NC_014334.2|WP_013245837.1|1736706_1737888_-|acetyl-CoA-C-acyltransferase
MEEVVILSAKRTPIGKLGGDLAGASAVDLGVAAAQAAIKAARIDPALLNQAIFGNVMQAGSGQNVARQIGLKSGMATSSTAMTVNEVCGSGLKAVRLGQAAIQLGEADAVLVGGTESMSQVPYYAEAVRSGHKFGDTTLVDGLSRDGLNDAFSQQPMGITAENVATQFNVSRQEQDEFALRSHLRAAAAAAEGRFKSQIAPVTIAARHGDVIVDRDSAIRPDTSLAKLAQLPPVFEVGGTVTAGNASGINDGAAALILMAKSKAEQLGLHYLATITGFSEVGIDPAIMGYAPKLAIDKILQATGGSIAAIDQIELNEAFASQSVAVARDLGLKDEQFNINGGALALGHPLGASGARILISLLYDLGERNQRQGIAALCVGGGIGIAMQIAMHV
>NC_014334.2|WP_003575994.1|1735414_1736695_-|hydroxymethylglutaryl-CoA-reductase,-degradative
MKFYELSPEKRRDQLVQEGWLTTQDAALLAGTHSLPEVTGARLIENAIGEFPLPLGVARNLLVNGQLHQVPIADEEPSVIAAASNGARLATANGGVRTHVAAHRVVAEVVLTNLTDLVQARQTILAHQTDIQKVIAVAHPSMIQRGGGLDQLTVESLGAQFLKIRLTLDPQQAMGANYANTVAEAVAAAVTSWVDGDVLVSILTNAPTELVTAEVSLEPVSLATKAVSGDVIAKKIVQLSDLAFVDAERAVTHNKGILNGIIGAVLATGNDTRAVAASIGAFACASGRYQPLSRWYMDQGHLVGHLQLPLPMGAVGGAIGALPMAQVVRRLGGYQNLAIMQQVIAALGLVQNLAAMRALAGPGIQAGHMKLQANALAIAAGATETELPMLVNALRQGSMDLKHAQQYLTTIRLNKKVGQSKDENRD
>NC_014334.2|WP_013245836.1|1734264_1735431_-|hydroxymethylglutaryl-CoA-synthase
MKIGIDAIAMDTPDFYVDLVKLAQVRGDDPDKYTIGIGQDEQAVPPSSQDIVTMGANAATKLLTPAIRASLGMVLVGTESGVDASKSAALFIHDLLALPEWVRAVELKEACYGGTAALMMARDYIAAHPDKTVLVIAADIARYGLATAGEVTQGAGAVAMLIKAEPHIMTIEDDSIYRSESIDDFWRPVYQDTAIAQGKYSTEQYLAFFQAIWSRYQTQRHHTASDFAAMTFHLPYTKMGKKALKLVLPDTDEATGERLQRRFEASTRYCRRVGNIYTGSLYLGLLSLLDNDTSLKAGDRIGLFSYGSGAVAEFFSGILQPDFAAQLHAANHAKMLADRQELTVPEYEAVFSDKVPYDPEDYRSDPTYYHGQFVLTGVIGQERQYQQR
>NC_014334.2|WP_003566048.1|1732186_1733941_-|pyruvate-oxidase
MTEKINAADAMIKVLEDWGIHNIYGLPGGSFDSTMNALYNRRHTINYVQVRHEEVGALAAAGEAKVTGRIGATFGSAGPGAVHLLNGLYDAQYDNVPVLALVGQVPTAAMNTNYFQEMNENPMFADVSVYNRTAMTAEQLPHVVDEAIRQAYKHNGVAVVTIPKDLGWTQIDDNYVSSANLYQKPLLPDPDPDQVAAAWDILKDAKKPILYVGNGARGARDEIIAFSEKTHIPIITTALAKGIVPDDYKANMGSAGRVASKPGVEVARGADTVLFLGSDFPFQPYFIAPNAKYIQVDIDGSKFGRRHTVDLAVLADAKKFIKALSEKADQLPESAWYRAALANKENWREWMTSFEDDGSTPLRVEPIFKLINEMAEKDAIFQVDVGNVTINGMRYLKTNDDQVFTTSGWYATMGYALPAAIGAQAEFPDRQVWSISGDGGFAMVMQDILTQVKYHMPIINVVLTNESLGFIEAEQDDTQQPHSGVDLIDADYGKAAEALGAQGFEVHNLDELKAAFAKAKDRKGPVVIDVKISDLRPIPVEQLVLDKQTQDPAAVDAFVKKYHAESLIPFRQLLEDAEKPVTNA
>NC_014334.2|WP_003566068.1|1743614_1744079_+|GNAT-family-N-acetyltransferase
MLREAQFIDLGAIVHLYQQLTAEMATMAPETYRPLTSDNRQYFADYLQNDLARLFVTETAGTLSGFALVVLARTGDNAEFVPQHFAQLIDLYVIPAQRHQGLAKQLMDAVTAFAKSHDATFIQLNVLNANQTAQQVYAKAGFEPVSLIFQKPLN
>NC_014334.2|WP_003566070.1|1744071_1744524_-|SprT-family-protein
MTDQELQARVEAISLKAFHQPFRHHAVFNNRLKTTGGRFHPADMNLDFNPKLFAVYPASVTDGIIKHELVHYHLYDHHRGYQHRDHDFKQLLTAVGGSRFAPPLPVNGHQYVYVCTHCGRQFVRRRHIDVRRYACGVCRGKLRLQKTLAS
>NC_014334.2|WP_003566072.1|1744665_1745418_-|ATP-binding-cassette-domain-containing-protein
MAELTLTNVTVNIPVGTEVKTLLQDVNLTVAKGEFLTVLGNNGAGKSTLFNAITGDMPVSGGTITLADQTLNGKRPEQRARHIARVFQDPKMGTAPRMTVAENLLLASHRGQRLTLRSRGMTASKAALKTLAAKTGNGLADALDKPTEQLSGGQRQALSLLMATMRKPDLLLLDEHTAALDPHTSQAIMQLTNEIVSDQQLTCLMITHQVEDALRYGNRLIVLDAGKIVADFDQAKKAAMSRDDVLAFFS
>NC_014334.2|WP_003566074.1|1745410_1746310_-|branched-chain-amino-acid-ABC-transporter-permease
MSIGVSAIGQGLLYGLIGLGLFLTFRVLDFPDMTVEGTFPFGAALAVSAITHGISPIVATLLATGAGMLAGLATGLLTTKGKIPVLLAGILVMTGLFSINLRIMGRANLSLLHQANLFQTAFLKDLPPYFNSVVIGVIVAVVVVGLLMLFLNTQLGQAFIAAGDNPSMARSLGIDPDHQMVLGLMVGNGLVGLAGGLLAQNNGYADVNMGIGIIVIGLAAIIIGEVVFGELTLSQRLVAVILGSILYRFVLLVVLALGFNADDLKLISAVVLAIAIMVPQIDHRLRLRRVLQKGVQAHG
>NC_014334.2|WP_003566076.1|1746306_1747302_-|ABC-transporter-substrate-binding-protein
MKRMLGLIFIMAAFLGIAYFQTGTTTPQTQATPTVGILQLTTHPALDAIHKGIIDGLKEKGYVAGKNVKIDFQNAENDQSNLKSMSERFTEEHAAATVGIATPSAQALANVNQKTPIILGAITDPVAAKLVKNVKRPGGNITGVSDQAPIAAQLKLIRQIMPNAKTLGVIATSSDDSAQTQAKMVEKLGPKQGFTVKRYAISSTNDLNQVATQMVSQVDAIFVPTDNTVASAMQTLVAVANTRKVPIFPTVDTMVEQGGLATIGLDQHHLGVLTGRMLADILSGKTKPATTPIHFETTGKLILNEKQAKLLGIDLPSSLIKTAEAKGTVIK
>NC_014334.2|WP_003566078.1|1747787_1748225_-|hypothetical-protein
MNKQQMKLANYGTTINAVVEATQDNQEKMAPLFEPLRKAIDENKLADYDLEAYQQTQTVFSEGTSNYEALLVKLQQVAAPARLLGPHHTLVRDFAAFTEACKAMTASLHADRQVDVAAFNAAEKAQDEAIQKFTKQIQKISVMLS
>NC_014334.2|WP_003566079.1|1748361_1751022_-|cation-translocating-P-type-ATPase
MANKPPYALSSEAVLKQEQTSLTGLTKEAAQTRLNENGPNELAQAEKKGMLARFLDQFKDFMIIVLLVAALIAGFLLSEWADAGIILAVVLLNAVFGVFQESKAEEAIDALKEMSTPNAHVRRGDQVLTIPSSQLVLGDIVLLEAGDVVPADLRLVESANLKIEESALTGESVPVDKTTAPLDADDVGIGDRTNMAFMNSNITYGRGVGVVIATGMQTEVGRIAGMINSAEETNTPLQENLKSLGKTLTVMILVIAVIVFAVGIWRQAASLPEMFLTAVSLAVAAIPEGLPAIVTIILALGTQKMAKRHALVRKLPAVETLGSTDIIASDKTGTLTQNKMTVEKVYYDGQLNDASAGIHGGNPLMTIMNFANDTQVQDDGKLLGDPTETALVAYGKTQNYDVAKALTGEPRIAEVPFDSERKLMTTVHRRADGKLLVATKGAPDELLKRVTDLATGENTAPLSDSERDAILKANKDMATQALRVLGMAYKVIDTLPEKVDSDTVENHMIFAGLVGMIDPERPEAEAAVAEAKAAGIRPMMITGDHRDTAEAIAVRLGIIDQGDDDAVITGAELDQQSDDEFAKNVAKYSVYARVAPEHKVRIVNAWQKKGKVVAMTGDGVNDAPALKAADIGIGMGITGTEVSKGASDMVLADDNFATIVVAVEEGRKVFSNIQKAIQYLLSANLGEVLTLFMMTMLGWDLLAPVHILWINLVTDTFPAIALGVEPTEPGIMKQKPRGRKSNFFSGGVGPAVIWQGILEGLLTLGVYWIAITYPVHSGSAAIHADALTMAYATLGLIQLFHAFNVKSIHQSLFTVGAFRNKAFNWAILASFVLLAVTILVPGFNGLFHVTSLDWHQWITVLGAGVAMIVIVEIVKVFERARRKQRA
>NC_014334.2|WP_003566081.1|1751329_1752487_-|serine-hydrolase
MSGKHRYIWLGVMLILCAVSIGAGTYLWQQNSRSAVNTKAKSAKTVTKVVRQDRGKSKEEILAMTLDRAATTTEGQPLEQELTNDKFIGSALIIKHGKVVFNNGVGDADTTTHRRNGPTTLFQIGSIQKAVTAVALAQLAASGKLSLDDPVGKYLTGIKTGDQVTLRMMVAMRSGFSLRRYQPTVMDDANIIQWSIANLTYLPQDNYAYQAVNYVLLAGVIEKVAGRSYEQQVKNNIFDRLNLKHTGFLPAMLTDPERAITYTGPAANPYQTAIGEPAVWYNRELGTGNVYTSTGDLYRLLRGIDTGKVLSLSTLKTLRNRNDGVYNAGIYNHADFYSTNGVVAGQMASTAISHDGQNAVILLSNYNSHALNLHDLAVHLFSELG
>NC_014334.2|WP_003566083.1|1752706_1753534_-|ammonia-dependent-NAD(+)-synthetase
MRPLQAEIIKALGVQATIDPETEVRRSVDFLKAYLKKNTFLKTYVLGISGGQDSSLAGALTEKAMQEMRAETGDDAYQFIAVRLPYGEQADEADAMAAIDFMHADVVKRVNIKPSVDAMVAAVEADGSKISDFNKGNIKARMRMIAQYAIAGNNAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLDKRQGAALLKVLGAPAHLYEKAPTADLEDNRPALPDEVALGVKYKDIDDYLEGKDVSDQAAETIEKWYQKTAHKRHLPITVFDNFWK
>NC_014334.2|WP_003566085.1|1753536_1754730_-|serine-hydrolase
MRASKRRSQHRWLILSLLVGLVVGIAAYASYDHFYLKPQIEAKEERTRRKYEIELNRHRAVEQRLQNETRTATSATDKLMQPVNQAEAKPFMKILEANHFSGTALMIRRGKIILNTGLGYADAESGRLNGPETLYQIGSIQKGLTAVLLMRLVEQGKVHLSDPISKYLTGIRTGKQVTLRMMLNMRSGLSLTRAQSASLSDAGIVRWSIANLNYGTVRYDYQPVNYVLLAGVIEKVTGRLYADLIQQEIFKKLKLTHSGFMPELFHESNQAFGYSGPINNPYAKRYTEPSVNYNRELGTGNIYTSAGDLYQIIKAVNQGKIISTASLKALRNLDNGQYTAGVYNFGGYTLTHGVVASQSAGTMIDTSGQNAVVLLANTDKITQGLIKNLYLNMIKGV

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Crispr_ID: NC_014334_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014334_5

1764457-1764563

Orphan

Consensus_repeat	Method
GGTCCTTATGTGTAGGTTTCTGGGCCAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014334_5

>merge|NC_014334|5|1764457-1764563|CRISPRCasFinder
GGTCCTTATGTGTAGGTTTCTGGGCCAGCAAACGCGTTTATGAGGAGCGTGAGCTAAACCGGAGCATAAAGTGGCCGCGGTCCTTATGTGTAGGTTTCTGGGCCAGC

>NC_014334|5|5|1764457-1764563|CRISPRCasFinder
GGTCCTTATGTGTAGGTTTCTGGGCCAGC	AAACGCGTTTATGAGGAGCGTGAGCTAAACCGGAGCATAAAGTGGCCGC
GGTCCTTATGTGTAGGTTTCTGGGCCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014334.2\|WP_003566087.1\|1754733_1756197_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236426
NC_014334.2\|WP_003566827.1\|1770433_1771864_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340890
NC_014334.2\|WP_003566081.1\|1751329_1752487_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NC_014334.2\|WP_003566826.1\|1771958_1773095_+\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|214829
NC_014334.2\|WP_013245841.1\|1775776_1777888_-\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NC_014334.2\|WP_003566101.1\|1757536_1758682_-\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434
NC_014334.2\|WP_013245374.1\|1767530_1768775_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|225995
NC_014334.2\|WP_003566105.1\|1759598_1761575_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NC_014334.2\|WP_003566828.1\|1769449_1769872_-\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003566085.1\|1753536_1754730_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NC_014334.2\|WP_003594979.1\|1773691_1775359_-\|phosphoenolpyruvate-carboxykinase-(ATP)	unknown	unknown	gnl\|CDD\|236471
NC_014334.2\|WP_003566099.1\|1756810_1757512_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NC_014334.2\|WP_003566103.1\|1758788_1759586_-\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|223422
NC_014334.2\|WP_003566823.1\|1775573_1775741_-\|FeoB-associated-Cys-rich-membrane-protein	unknown	unknown	unknown
NC_014334.2\|WP_003566109.1\|1762791_1764258_-\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|225646
NC_014334.2\|WP_003566825.1\|1773203_1773521_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131249
NC_014334.2\|WP_003566083.1\|1752706_1753534_-\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NC_014334.2\|WP_003566107.1\|1761902_1762730_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|163441
NC_014334.2\|WP_003566829.1\|1768935_1769310_-\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003566111.1\|1764721_1767040_-\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|213222

Protein	Function_ID	Function_description	E-value
NC_014334.2\|WP_003566087.1\|1754733_1756197_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|236426	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated.	0
NC_014334.2\|WP_003566827.1\|1770433_1771864_+\|MFS-transporter	gnl\|CDD\|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.98331e-43
NC_014334.2\|WP_003566081.1\|1751329_1752487_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.83637e-45
NC_014334.2\|WP_003566826.1\|1771958_1773095_+\|alpha-L-fucosidase	gnl\|CDD\|214829	smart00812, Alpha_L_fucos, Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.	3.1847e-72
NC_014334.2\|WP_003566101.1\|1757536_1758682_-\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	3.42008e-156
NC_014334.2\|WP_013245374.1\|1767530_1768775_+\|ISL3-family-transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.20353e-51
NC_014334.2\|WP_003566105.1\|1759598_1761575_-\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.7026e-97
NC_014334.2\|WP_003566085.1\|1753536_1754730_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	8.24724e-43
NC_014334.2\|WP_003594979.1\|1773691_1775359_-\|phosphoenolpyruvate-carboxykinase-(ATP)	gnl\|CDD\|236471	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase.	5.23563e-06
NC_014334.2\|WP_003566099.1\|1756810_1757512_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	3.02871e-84
NC_014334.2\|WP_003566103.1\|1758788_1759586_-\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|223422	COG0345, ProC, Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism].	8.5867e-80
NC_014334.2\|WP_003566109.1\|1762791_1764258_-\|peptide-MFS-transporter	gnl\|CDD\|225646	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism].	6.68207e-154
NC_014334.2\|WP_003566825.1\|1773203_1773521_-\|hypothetical-protein	gnl\|CDD\|131249	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.	6.08924e-12
NC_014334.2\|WP_003566083.1\|1752706_1753534_-\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	0
NC_014334.2\|WP_003566107.1\|1761902_1762730_-\|metallophosphoesterase	gnl\|CDD\|163441	TIGR03729, acc_ester, putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.	5.64581e-118
NC_014334.2\|WP_013245841.1\|1775776_1777888_-\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NC_014334.2\|WP_003566111.1\|1764721_1767040_-\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	6.0202e-103

>NC_014334.2|WP_003566109.1|1762791_1764258_-|peptide-MFS-transporter
MNNSKDRTFMGHPRGLLTLSMTEFWERFSYYGMRAILIYYMYYAVEKGGLGFDQPTALSIMSIYGSLVYLSATIGGFISDRLLGSRRTVFWGGVLIMLGHIVLSLPIGATGLFGSIVLIVLGTGLLKPNVSEMVGSLYPEDDLRRDSGFSIFVMGINFGSLIAPIFVPWMADKVNFHAGFSLAAIGMFVGLIFYVIDGRKYINPADNTAPDPLKPEDVRPLVIRVVVAIAAVGVILLAMAGFNALTIANVISLITLIAIGLPIWYFVLMIRSKKVTKTERSRVIAYIPLFLAAMIFWAIEEQGSVVLALFAAQQTKLDFGFFKILPGNFQTLNPLFILLYGPLFAWLWMKLGKRQPTSPKKFYLGLIFAGASYLWMVIPVMLFGSSAKVSPLWLVMSWAIVEIGEMLISPVGLSVTTKLAPKAYSSQMMSMWFLADASAQAVNAQIVRFYTPNHEVAYFAIVGLVSVGFAVVLAFFTPRIEKLMQGVN
>NC_014334.2|WP_003566107.1|1761902_1762730_-|metallophosphoesterase
MVKIAFSVDNHFDVNRVDGFEMLKKQAAYLIEHDYQIYVNAGDTYNDFTKSLAYFRALQAEVGSAVTIRFLAGNHDMVNGATYDEIQSAVDPLYLHEKILPVPSTNAVIIGNNGWYDYSLGQLGNMKTDAEYAQWKRAFWIDSAIDAPVTDAARMQRVLTTTKAALQANQTHQMIYVTHFVPIREAMVYTVDRPPWQMATALMGSAKLGDLLTGRVSAVVFGHEHFRDAPKLLSGTTYYHQPLGYGLKRLFEWQSQDWWTEWRQTLVTLTVPTLS
>NC_014334.2|WP_003566105.1|1759598_1761575_-|S9-family-peptidase
MAIKATDLFKLVSLSYPSATDDGYFVQENRISEADNTYYQRICFVNHRGGTIAYGFDQKHDRHPLLSPDQQWLAFLSQASDKTTQVFLQAVNGGTAKQFSAEKEGVSYFGWQADSQALFIQTTVGAKPKKTDKQWPQPVTVSRVPYKLNGVGLLPEHVAYELRVQRLRQKTSRLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDFSQATYLLNLVDQQVTMVNDQLPQAALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDLATKTLQDVADDIDFDIPGHVNGDFQQDLSEKVADFATADYYLTIGFDHGKTSLYAGGPDEQLTPLIGGRRHVTDYALTPDHHGVVFTESTMTVPSRLSYFDLATEEEHVIYDPNRRVTRDMGLVTPQTFNFQRDGFEIEGWYFPPQQATASHPAILYVHGGPAVGYGYTFFHEMQFLAAQGYGVICPNPRGGLGYGEAFTAAVIKHYGQGDYEDCMASVDEALKLDTTIDPDRLYVAGGSYGGFMTNWIVTHTHRFKAAVTQRSIANWLSMYGTSDIGYFFTPWELEGKWTGDLSDVKSLWDFSPLAHIDFAQTPTLVMHSENDQRCPIGQGEEFYIGLKLHGVDTKFMRFPNATHELSRSGLPNLRLARLAALVDWFKTHSATEESHQA
>NC_014334.2|WP_003566103.1|1758788_1759586_-|pyrroline-5-carboxylate-reductase
MTIGFIGAGNMARAIITGLLAKNAVTPEEIVLHGGQPIHYEPYAAKIGAKAVASNQAVADTADIVFLAVAPKLGVPILKTIGPTLKQRQVPIVSMLTGVSLATLEDALGSQDQPVLRIMPNVNVAINAGMTAYAANDSVAGQLDGLLDLLNVLGKTMALPEDQFSTFVALAGSSPAFVYLFIDSLSRAGVKYGLTKKQATAIAAQAVMGSAQNVLASEQSPFDLIDQVSSPGGTTVAGLLAMEQAGLMSAVIKGVDATIAKDRQG
>NC_014334.2|WP_003566101.1|1757536_1758682_-|N-acetylglucosamine-6-phosphate-deacetylase
MTVTVLKHATIYTGLERIDDGYVRFDDKILAVGDMFDYRAQSGEQTFDLQGKTMIPGFIDVHAHGGYGFDAMDGDADQIDEMATKMMTHEGVTTLFATTMTQSTENIDKAMRGVKQAAERNHIIQGVHLEGPFISKVFKGAQPEEYIKNPNVDLVKQWQELSGGLVKLITYAPEDEGSQAFEDYLLAHNIVPSVGHSNATREQMLHSKATHVTHLYNAQRGLRHREPGVTGHAMLEDNMYCELICDGFHIVPDMLRLAFDQKGPERIELVTDSMRSKGMPEGKSELGGQTVYVKDKQARLKDGTLAGSVLMYKDAFKNAMSFMDASLFDAVEMSSVNQAREFNLTSKGTLEVGKDADINVLDRNNDLVATYSYGVKHDTED
>NC_014334.2|WP_003566099.1|1756810_1757512_-|GntR-family-transcriptional-regulator
MDAPVYIQIHNAIRADIEAGKWRVGDRIPSERDLAVTFKVSRMTLRQAIQTLVDEGILERRVGSGTYVANQKVQEKMSGVTSFTDLMQAQGKVPSSKTVSYHVAQPTSSEVEKLKLEPKEQVLRMERIRYADKIPISFETAAVPYNLVKNFTKKEMTASFYHTLEKKGGYVLGGAQQTVSAMLASERISEYLDIKRGEAILRLRQVSFLQDGTPFEYVRTQYVGERFEFYLER
>NC_014334.2|WP_003566087.1|1754733_1756197_-|nicotinate-phosphoribosyltransferase
MTTQLGEGLTLHTDFYELNMMNTFFEQGISERNAVFEVFFRDLPFGSGFAVFAGLEHVMDYLNHLKFSEDDLAYLQSQTDYSDAFIDYLRHLKFTCTVKSALEGDLVFNNEPIWQIEGPLAQAQLVETAVLNMINYQTLVATKAARIRSVAGADPLMEFGTRRAQETAAALWGTRAAYIGGFNATSNVLAGKEFGIPISGTHAHSLVQAYGNDYDAFKAYARSNKDVVFLVDTYDTLRSGVPAAIKVANEFKGKINFLGVRIDSGDMAFISKRVRQQLDDAGYESAKIYASNDLDENTIQNLKMQGAKIDIWGVGTRLITAYDQPALGAVFKLVSIEDAAGKMRDTIKLSNNAEKVSTPGKKQVWRITRQDDGKSEGDYVALADETIDTQRSLYMFHPNFPYINKTVKNFEAKPLLQTIYDKGQQVYHTPPLQEVQAYATRSTNALWDEYRRILNPQDYPVDLSQRVWDNKMDLIKAVKSAVADREE
>NC_014334.2|WP_003566085.1|1753536_1754730_-|serine-hydrolase
MRASKRRSQHRWLILSLLVGLVVGIAAYASYDHFYLKPQIEAKEERTRRKYEIELNRHRAVEQRLQNETRTATSATDKLMQPVNQAEAKPFMKILEANHFSGTALMIRRGKIILNTGLGYADAESGRLNGPETLYQIGSIQKGLTAVLLMRLVEQGKVHLSDPISKYLTGIRTGKQVTLRMMLNMRSGLSLTRAQSASLSDAGIVRWSIANLNYGTVRYDYQPVNYVLLAGVIEKVTGRLYADLIQQEIFKKLKLTHSGFMPELFHESNQAFGYSGPINNPYAKRYTEPSVNYNRELGTGNIYTSAGDLYQIIKAVNQGKIISTASLKALRNLDNGQYTAGVYNFGGYTLTHGVVASQSAGTMIDTSGQNAVVLLANTDKITQGLIKNLYLNMIKGV
>NC_014334.2|WP_003566083.1|1752706_1753534_-|ammonia-dependent-NAD(+)-synthetase
MRPLQAEIIKALGVQATIDPETEVRRSVDFLKAYLKKNTFLKTYVLGISGGQDSSLAGALTEKAMQEMRAETGDDAYQFIAVRLPYGEQADEADAMAAIDFMHADVVKRVNIKPSVDAMVAAVEADGSKISDFNKGNIKARMRMIAQYAIAGNNAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLDKRQGAALLKVLGAPAHLYEKAPTADLEDNRPALPDEVALGVKYKDIDDYLEGKDVSDQAAETIEKWYQKTAHKRHLPITVFDNFWK
>NC_014334.2|WP_003566081.1|1751329_1752487_-|serine-hydrolase
MSGKHRYIWLGVMLILCAVSIGAGTYLWQQNSRSAVNTKAKSAKTVTKVVRQDRGKSKEEILAMTLDRAATTTEGQPLEQELTNDKFIGSALIIKHGKVVFNNGVGDADTTTHRRNGPTTLFQIGSIQKAVTAVALAQLAASGKLSLDDPVGKYLTGIKTGDQVTLRMMVAMRSGFSLRRYQPTVMDDANIIQWSIANLTYLPQDNYAYQAVNYVLLAGVIEKVAGRSYEQQVKNNIFDRLNLKHTGFLPAMLTDPERAITYTGPAANPYQTAIGEPAVWYNRELGTGNVYTSTGDLYRLLRGIDTGKVLSLSTLKTLRNRNDGVYNAGIYNHADFYSTNGVVAGQMASTAISHDGQNAVILLSNYNSHALNLHDLAVHLFSELG
>NC_014334.2|WP_003566111.1|1764721_1767040_-|ABC-transporter-ATP-binding-protein/permease
MLDLKHIKKYYQTGDYTTKALDDVSVQFREQEFVAILGPSGSGKTTLLNVIGGLDRYDSGDLLLHGRSTKNFKEADWDAYRNNSVGFIFQSYNLIMHLSILENVELGLTLSGVSAADRRKKAEAALTKVGLKAHMGKQPNQLSGGQMQRVAIARAIVSEPSILLADEPTGALDTETSEEIMRLIADLSRERLVIMVTHNPQLAHEYAERTIEFKDGKILSDSRPFKDEEKTASFDLHRTKMSYFTALKLSFTNIMTKKGRTFLTAFASSIGIIGIAVVLALSSGFQKQIDNTQAETLAQFPITISTNATSLTAGAADNTKTSTFKTTSTVVAKQSASDKAQHTNKLNQKYIDYVNGISKKLTDNIGYTYGTGMNLLRDVNGTIKPVQFSTAKPSSNQTQRGLASASSSVYPVDREGGTSYLKKNYEVVAGSYPKHDGDVILIVDRDNSTNINALKNLGFDVKDGQKVKFNQIVGTKIKAISNNAYYQNVAGNVYVPTKGYANAYKQNDNRELTVAGVLRTRSKTSDGLLSQGFAYSDRLTKDLVALNKDSDVVKAQRASDVNIFTNQSVDKATKDQLITALGGSETPTQITIYPTSFKDKDKILSYLDKFNRGKKKADQVVYTDLAGTISSMTGGIMSAITIVLVAFAGISLVTSMIMIAILTYTSVLERTKEIGVLKALGARRKDITRVFDAETIILGVSSGILGIIIAWLLTFPINAILYSMTELPNVAQLNPIHAVILILISTILTVLGGHIPARMAANKDAAIALRAD
>NC_014334.2|WP_013245374.1|1767530_1768775_+|ISL3-family-transposase
MSQYDPTLSVLGIPDHNIKVAFVRHEYRGNGVRRRQYHVIDAELTYRLTRCPLCGFEALHPNGFYTAHVRVLNGVEMPTVIDLHKQRWRCHNCYHTVSAKTPLVQPNHTIAAHMTERIMKLAHERLPVKTIARIIGISASSVQRIIDQNLKLRPARRLPTRLCFDEFRSTHGMMSFICLDADSHRLIALLGDRFNRTIKNFFIAHYSLADRTRVQTVTMDMNAAYQTIIHEVFPKAQVVIDRFHIIQLAARALDQVRVQALKQLDDKHSRPYKIMKTNWRLFHQTAPDAKHKQFLFGLNEYVTQQEAIDIALDTEPKLKQTYETYLALHDALMVKKHPAELANLLATYEPNGTAMDMTIATLKRHKVAVLAAVTSPYSNGPIEGVNRLIKSLKRSCFGFKNQLNFFKRIYQITA
>NC_014334.2|WP_003566829.1|1768935_1769310_-|hypothetical-protein
MAVWRMMFARPQFKHRQIKRMVDDLNREGNFGGMPIHRITLTRQTRELIYVDLEFQLTTGLTQPLFEQMAKYILVAVAGLAHAPQPIYLAAMANPFAKLNISYYIYPDHSLDLIYWQPLLREPT
>NC_014334.2|WP_003566828.1|1769449_1769872_-|hypothetical-protein
MHTRCQEPNYVEVVNQNLERLLVFETVFKEYVHTCKNIEKGNCYASESLDHLRLYFTKNVMKFCTFVDSVDAEAAPCNYAAFHKVLVNGLRGIRGGVLNMLQAIGTDKVDHDRFAAGLAEQQAARAEIDTAFSKILDPIF
>NC_014334.2|WP_003566827.1|1770433_1771864_+|MFS-transporter
MKGYPKQYPLDRQTLFGINTMGLMSTTAYYLYTAVLMMFITDYSGIYSGVPGKAAAVATTLLFVGRLWDAVNDLWTGYLIDISPRTRWGKFKPYVLIGSLLAGILGMMLFHIPQNLSNFGKEVYLYIVYFLFMFAATIIVTVPLTSTMSADQEVRAKLISWPRITSNIVGVVFAFFMAIATYLGTKRNPNIPLTVDLIVIPFLILSLIGIVMVKEGPVTEEAKPPRLRDIGQMIKINHPFRINLYFTFVGGFVWALLTATSLYYIKYAFGVKNLGTQSMYFGLLTLITLVAGTLISQKAMQYISAIRGVQWCYLAMAPFLVIMFIINEIHVIDNPWVFYLLIGIVMTIAGAQFVPANLIIMETMDYNRLKLNAGMEATINAVNMFLQKLQSGLATIGVGAALLIVGYNAQTLEKATHVPDNLLQSLGVVLFAIPAVFSFLAYLIARHYPLQGAARDEMYAALAAKQVTNTQSSKSK
>NC_014334.2|WP_003566826.1|1771958_1773095_+|alpha-L-fucosidase
MTKSSAVNIHRTNPPDWFKQADFGIIIHWGPYSVPAYAPVNIPDYGTLIKTKSLGYLFEHQPYAEWYGNSMLLPNSPVAAYHRTHYGNTSYADFAKTFKQTAQNVDVQAWAAAFANAGAKYVVIVTKHHDGFVMFDPHTNNPYEPDYHLNFDFVGELAQAVRAHGMRFGTYYSSLLDWTFPHLPIKDYGSFLLGNDKSQTYKDYVWHQWHELIDRYHPDVLWSDIGYPDDHRLETLFKYYYQQVPEGLVNDRWQQFPDWMRTSWIRPIFNLVAAQVIKRDQHHSDDLSEVKYYDYRTLEYRTDWPQTNRYFEMTRGMDKSFGYNRLSRPEDYITADDIKQLIAELRSKRGRLLLNVGPDMNGQIPSAQLSILQQLSDR
>NC_014334.2|WP_003566825.1|1773203_1773521_-|hypothetical-protein
MAIHFVIYEKPNCESCRLTKRWLAEHGQHFRTTNHRGESNLVDINANDPLKRAWSHQKIVKFREAGYDRFPVVRVRDDATGDVLATWSGFRPEALASWTAINQLG
>NC_014334.2|WP_003594979.1|1773691_1775359_-|phosphoenolpyruvate-carboxykinase-(ATP)
MTSKQSFSSSDITSQSGYFSALKATVETAFYGENVKQVTTIAQAYALAKTAPGVIITDLPIKHTAELGLPPDAKVLVANDGRVVGRTAAARQIIGQPDVDETKLAAIAREAVFLGSRKTFLRGDVTVGLSSDFAIKAHLMLPEAYANNLYTYLLNFQIDTPQRNAEYEQSRPLPEDDIYLYADPDWHDPAYPNGLAVFDPTHNAAIVLGLRYFGELKKGTLTLAWATAHRNGFVACHGGMKQYTRQDGDFTMAAFGLSGSGKSTITLASHGDQYPVKVLHDDAFVIDRQTGATTALEPSYFDKTQDYPLSDPGIQYFLTVQNVGVTLDAAGKKTLVTQDIRNGNGRTVKSRYVTPNRVDHLTESIDAIFWIMKDDTLPPVVKLEDPDLAAAFGVTLATKRSTAENVIGDVDRDHLVIEPFANPFRSYPLGEDYQDFHQLFEQRQTACYILNTGSYNGQNVKPADTLGAIAKIVDETAAFKPFGLLPKMRYLPLSGFNVDFGDNDYRARLRQRLEDRLAFIATKDVDHDGYDRLPIDASRALEDVIAALDQQAAAM
>NC_014334.2|WP_003566823.1|1775573_1775741_-|FeoB-associated-Cys-rich-membrane-protein
MATWIIGGIVVLIIAVVAYRTFFKKNKAGCSQCEEVGCPLIDHAKMVQANNRRKA
>NC_014334.2|WP_013245841.1|1775776_1777888_-|ferrous-iron-transport-protein-B
MAIRETLALVGNPNSGKTTLFNALTGAKQHIGNWPGVTVERKSGRLKADNALVIQDLPGTYSLSPYSSEEIVTRDFLLNDQPDLVLNVVDATNLERNLYLTLQVMETGRPLIVALNMMDVLVKTGHRTINLKKLSYALQVPVIATTATKPAALQELVQTIQAPLPKPYAFPEYDARFESALTMLEDVIDQKVPADRLRWYAIKVFEKDPQVVKQLAFSSDEQHQINEILRTAEHVFDDTTDSIIVNARYDFIARVIAMCVVDKDDFVMSMSDKIDRIVTDRYLALPIFVLVMWAVYYLSIQTIGTIGSDYLNDTVFGGWLPSVVGGTLKSWVVAPWLSGLIVDGLIGGIGSVLGFLPQIMMLFLCLGILEDCGYMARIAFVMDRLFHRFNLSGKSFIPILIATGCGVPGIMATRTIESEKDRRMSIMLTTFMPCSAKLTVIALVSGTFFPSNSWVAPSAYFMGIIAVICSGIFLKKTALFAGPPAPFVMELPAYHLPRLTNLYRSVMSRARAFVQKAGTIIFLSCVLLWFLSNFNFGLQMVDENDSMLRGLGTVIAPVFAPLGFGDWHATVATLAGLIAKENCVGTLHISFGAGSASGFGQALRATYPAMAGYAFLVFNLLCAPCFAAIGTMYKEFGDARWTWRAVGYQTGVAYLLTMLIYQGSLVVSGQASVMSIGLVLVAILLIVYGLLIKRPVPAIASSF

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Crispr_ID: NC_014334_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014334_6

2126072-2127163

TypeII

Consensus_repeat	Method
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CRISPRCasFinder
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CRT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	PILER-CR
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	PILER-CR

16 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NC_014334_6

>merge|NC_014334|6|2126072-2127163|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
AGAATTTAACTGGTTGATTCGACATCTACCTGAGACTGTCGGCTTTTGGATAACACCAAATCGTCAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTCCATGGTAAAAACCTCCTATTATTTTGTTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACACGACATAGAGGTTATTCATTCCATTTCACGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTGTTGCAATCGGTGAAAGTATCGCGATTGCGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGCGACAATCTCCCGACTGATGATATTGGCCGCTCTTGAACTGATTGATTCGACATCTACCTGAGACCGATGTGTTCTTGTCAAAACATTTTTTGCGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACAACATATTGATCAGCCTTTCTTCAACGATCGCTCTTGAACTGATTGATTCGACATCTACCTGAGACCCATAAAGTTGCTAATTCTAGAAATATTTTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTGTCAGCCATAAGCGTGTTAGCCGCTACGAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACCGAGACCAACACCAGCGCAAGCGAACGCTTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGCGCGAGTTGATCGCAACGGAAGGCAGTTTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGCCAGTTGTTTAATGGATAAGCCTCTGATAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTTCGTCTTTAAGCGGTGCTAACCAATTTGGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTTCGTTGTTTCGTTAATATCTTTATCATGCGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTTGCCATTTTTAAAGCAATGCGCACTTACAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGAAATACTTGTCTCATTTTTTGTGTATGCAGCTCTTGAACTGATTGATTCGACATCTACCTGAGAC

>NC_014334|6|6|2126072-2127163|CRISPRCasFinder
AGAATTTAACTGGTTGATTCGACATCTACCTGAGAC	TGTCGGCTTTTGGATAACACCAAATCGTCA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TCCATGGTAAAAACCTCCTATTATTTTGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACGACATAGAGGTTATTCATTCCATTTCAC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGTTGCAATCGGTGAAAGTATCGCGATTGC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGACAATCTCCCGACTGATGATATTGGCC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGATGTGTTCTTGTCAAAACATTTTTTGCG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AACATATTGATCAGCCTTTCTTCAACGATC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CCATAAAGTTGCTAATTCTAGAAATATTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGTCAGCCATAAGCGTGTTAGCCGCTACGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGAGACCAACACCAGCGCAAGCGAACGCTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGCGAGTTGATCGCAACGGAAGGCAGTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCCAGTTGTTTAATGGATAAGCCTCTGATA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTCGTCTTTAAGCGGTGCTAACCAATTTGG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTCGTTGTTTCGTTAATATCTTTATCATGC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTGCCATTTTTAAAGCAATGCGCACTTACA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GAAATACTTGTCTCATTTTTTGTGTATGCA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC

>NC_014334|6|1|2126072-2127163|CRT
AGAATTTAACTGGTTGATTCGACATCTACCTGAGAC	TGTCGGCTTTTGGATAACACCAAATCGTCA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TCCATGGTAAAAACCTCCTATTATTTTGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACGACATAGAGGTTATTCATTCCATTTCAC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGTTGCAATCGGTGAAAGTATCGCGATTGC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGACAATCTCCCGACTGATGATATTGGCC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGATGTGTTCTTGTCAAAACATTTTTTGCG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AACATATTGATCAGCCTTTCTTCAACGATC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CCATAAAGTTGCTAATTCTAGAAATATTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGTCAGCCATAAGCGTGTTAGCCGCTACGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGAGACCAACACCAGCGCAAGCGAACGCTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGCGAGTTGATCGCAACGGAAGGCAGTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCCAGTTGTTTAATGGATAAGCCTCTGATA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTCGTCTTTAAGCGGTGCTAACCAATTTGG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTCGTTGTTTCGTTAATATCTTTATCATGC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTGCCATTTTTAAAGCAATGCGCACTTACA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GAAATACTTGTCTCATTTTTTGTGTATGCA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC

>NC_014334|6|1|2126336-2127163|PILER-CR
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGACAATCTCCCGACTGATGATATTGGCC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGATGTGTTCTTGTCAAAACATTTTTTGCG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AACATATTGATCAGCCTTTCTTCAACGATC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CCATAAAGTTGCTAATTCTAGAAATATTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGTCAGCCATAAGCGTGTTAGCCGCTACGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGAGACCAACACCAGCGCAAGCGAACGCTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGCGAGTTGATCGCAACGGAAGGCAGTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCCAGTTGTTTAATGGATAAGCCTCTGATAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTTCGTCTTTAAGCGGTGCTAACCAATTTGGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTTCGTTGTTTCGTTAATATCTTTATCATGCGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTTGCCATTTTTAAAGCAATGCGCACTTACAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGAAATACTTGTCTCATTTTTTGTGTATGCA
	TTCGTCTTTAAGCGGTGCTAACCAATTTGG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTCGTTGTTTCGTTAATATCTTTATCATGC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTGCCATTTTTAAAGCAATGCGCACTTACA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GAAATACTTGTCTCATTTTTTGTGTATGCA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC

>NC_014334|6|2|2126864-2127163|PILER-CR
	GCGACAATCTCCCGACTGATGATATTGGCC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGATGTGTTCTTGTCAAAACATTTTTTGCG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AACATATTGATCAGCCTTTCTTCAACGATC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CCATAAAGTTGCTAATTCTAGAAATATTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGTCAGCCATAAGCGTGTTAGCCGCTACGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGAGACCAACACCAGCGCAAGCGAACGCTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGCGAGTTGATCGCAACGGAAGGCAGTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCCAGTTGTTTAATGGATAAGCCTCTGATAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTTCGTCTTTAAGCGGTGCTAACCAATTTGGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTTCGTTGTTTCGTTAATATCTTTATCATGCGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTTGCCATTTTTAAAGCAATGCGCACTTACAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGAAATACTTGTCTCATTTTTTGTGTATGCA
	TTCGTCTTTAAGCGGTGCTAACCAATTTGG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTCGTTGTTTCGTTAATATCTTTATCATGC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTGCCATTTTTAAAGCAATGCGCACTTACA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GAAATACTTGTCTCATTTTTTGTGTATGCA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014334.2\|WP_003566944.1\|2136248_2136572_+\|DUF4870-domain-containing-protein	unknown	unknown	unknown
NC_014334.2\|WP_003580501.1\|2138351_2140094_-\|thiol-reductant-ABC-exporter-subunit-CydD	unknown	unknown	gnl\|CDD\|227321
NC_014334.2\|WP_003588552.1\|2135680_2136055_+\|YxeA-family-protein	unknown	unknown	gnl\|CDD\|377665
NC_014334.2\|WP_003588557.1\|2136643_2138371_-\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
NC_014334.2\|WP_003605781.1\|2111752_2113084_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224169
NC_014334.2\|WP_003586314.1\|2127861_2128167_-\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NC_014334.2\|WP_003605791.1\|2122223_2123915_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|227321
NC_014334.2\|WP_003605793.1\|2124111_2124537_-\|NusG-domain-II-containing-protein	unknown	unknown	gnl\|CDD\|227646
NC_014334.2\|WP_012491867.1\|2119600_2120458_-\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|170086
NC_014334.2\|WP_003605782.1\|2113289_2114708_-\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NC_014334.2\|WP_012491871.1\|2129247_2133333_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NC_014334.2\|WP_003605794.1\|2124687_2125791_-\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003605785.1\|2117310_2119149_-\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|273919
NC_014334.2\|WP_003588545.1\|2128144_2129050_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NC_014334.2\|WP_003605790.1\|2120595_2122227_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NC_014334.2\|WP_003604680.1\|2127187_2127865_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NC_014334.2\|WP_003566938.1\|2134290_2135457_-\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003588514.1\|2115691_2117140_-\|family-1-glycosylhydrolase	unknown	unknown	gnl\|CDD\|236580
NC_014334.2\|WP_003580491.1\|2133495_2134290_-\|hypothetical-protein	unknown	unknown	unknown
NC_014334.2\|WP_003605783.1\|2114998_2115565_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228

Protein	Function_ID	Function_description	E-value
NC_014334.2\|WP_003580501.1\|2138351_2140094_-\|thiol-reductant-ABC-exporter-subunit-CydD	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NC_014334.2\|WP_003588557.1\|2136643_2138371_-\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	7.03579e-159
NC_014334.2\|WP_003605781.1\|2111752_2113084_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224169	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion].	4.92676e-109
NC_014334.2\|WP_003586314.1\|2127861_2128167_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.69699e-23
NC_014334.2\|WP_003605791.1\|2122223_2123915_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	1.47636e-93
NC_014334.2\|WP_003605793.1\|2124111_2124537_-\|NusG-domain-II-containing-protein	gnl\|CDD\|227646	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown].	4.87983e-33
NC_014334.2\|WP_012491867.1\|2119600_2120458_-\|PRD-domain-containing-protein	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	3.39686e-35
NC_014334.2\|WP_003605782.1\|2113289_2114708_-\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.04271e-65
NC_014334.2\|WP_012491871.1\|2129247_2133333_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	5.52985e-120
NC_014334.2\|WP_003605785.1\|2117310_2119149_-\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
NC_014334.2\|WP_003588545.1\|2128144_2129050_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.76359e-89
NC_014334.2\|WP_003605790.1\|2120595_2122227_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.53157e-92
NC_014334.2\|WP_003604680.1\|2127187_2127865_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	8.55728e-83
NC_014334.2\|WP_003588514.1\|2115691_2117140_-\|family-1-glycosylhydrolase	gnl\|CDD\|236580	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed.	0
NC_014334.2\|WP_003588552.1\|2135680_2136055_+\|YxeA-family-protein	gnl\|CDD\|377665	pfam06486, DUF1093, Protein of unknown function (DUF1093). This family consists of several hypothetical bacterial proteins of unknown function.	2.98162e-19
NC_014334.2\|WP_003605783.1\|2114998_2115565_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.00337e-11

>NC_014334.2|WP_003605794.1|2124687_2125791_-|hypothetical-protein
MKKLIVLSATLLVSMGLAACSSGSSSSSSKSSSSTTSQTSNAKVKINTGADASAKVPAAGTLVMRQLYAAPHGKQSFAAVNVTLNGDTIVSAKIDEFQYVKKSSDWTGVPNSNKDFGKSYPKGQFLIAKAENSKPYSALMKKEAKATHTWEENETAITNFVKGKKIEDLKADVAKVKDTKKVSDVVSGATFADTAGYLQAIYDAATTGMVAEGIQTTDNTITEGQVLAAPHGTQSFGIVTVAMQGDKIANVFLDEFQYMPSKDFGGVPNSNADFGKEIKSGTVLASKRANSEAYSAIMKSKGKATQTWQENSNAIDEFAKGKTIAELETAVSDLKGKKKVSDVVSGATFTDTSGYLTAIISAAKAAK
>NC_014334.2|WP_003605793.1|2124111_2124537_-|NusG-domain-II-containing-protein
MRWLKKYVRPFDYVIVIVLFVACFLPVGIFSLTEANVNTNQKVAVISIKGHVKRRIQLTTHTRHQQFTLYPAKGQYNIIEVQGARIRDKEDNSPDQIAVHTGWISQVGQQSICLPHKLLIEIKPAQAGTGTSGDTGGLVHP
>NC_014334.2|WP_003605791.1|2122223_2123915_-|ATP-binding-cassette-domain-containing-protein
MLGLLKYGRDQRWAGVIETVFDWLPTLLPIMIALNFAAKRPGNALIITVILVLIWLGYVIGYERHHRHAWAMSAKRELRDHYFEALYQRNNAGDATAADNAVIQRDLGGLNNLDMFYSTLFPTLIQAGLTFLLLIGLSVWYGSWLAFLPLVCVFLIGFAMMFLGKKMSAQNKAHLAGFLRMGGRFMNDLSGMNTLVMYNAADRYAKKFADDSEYFRQATMNLLRTQLQVLFVINGFVYLTVFAGGFVTALQLAAGQLPAAGAFATWFALAMMMVNARQLGYFFHVVKSNGPALAGILATIAKSKTTPATVKITDNRPLKQLVLQDVAIGYEADAPLVSDINATLVPGKLYGLAGENGTGKSTLTQALLGQLTPLSGTIMADNTPVTALSNAQRAAVFGYVAANDYIFSGTIKENLLLGNQFGDQWQQHLDELGLMHFVTDLQDGYATEVGEGGRLLSPGQRQQLAFARMLLADKTVYLLDEMTSSIDAANAAIILAAIKRLSRQKIVLFISHDLSAMAEADVVWFIHDHQLISADHAQLYRDQPAYRHLVDNPEAMLKEGQPS
>NC_014334.2|WP_003605790.1|2120595_2122227_-|ABC-transporter-ATP-binding-protein
MIRSLLRYTHHLTGTIIISFLIGLVAELTKVVVLVLAAMMLFDPQNASHLLIPGIIAVVIVGLGSFGEQYAGHFVAFHVLAELRGAVYRKLMQLAPAKLDSQGSGKLLKLIGSDIEAMEIFYAHTIVPVAIGLIYGVLMVAVYSSLNGPAAAVVLVSYAAVGLLIPYYRHEQMTAKAQAADRQKAVNQQYLLESVRGMAVLRQLEVADARMKTGNEGFDHEATAFQQSQFGQLLKNMSATLVMLLAWLFIVWLSGWTQPQPLQQALLAVFPLTFGPLLALTNLPASLLNGFAAARNLLNLLQEAPATSAAIDATQTLNQIAIIQVDHVTFKYPSRDETVLRQVSLSLHAGEIVGFVGASGSGKSTLAKLIMGWYPLTQGRILIDGIDVTKIDPASLRAQVNYLPQTPVFFSESVRDNLTLHDLTITDAQIWTVLDQVKLTSRLRQAEKGLDENVVSGQLQFSSGEQQRLELARALLHPSSVLVLDEPTSNLDTENERLILDTIKAYYHGIVIMISHRAESAAYADRLYRFADHRVSAASTEPK
>NC_014334.2|WP_012491867.1|2119600_2120458_-|PRD-domain-containing-protein
MIIQNVLNNNAVVARHQQREVIVVERGIGFRAKKDAKMALRDSMKVYVPEDQAKLKIATATIASLPSAYLDLAAGIIQEAEKRLQTTFNSYLLIELADHVHFAVQRLHEKIVLHNKLLWEIQVAYTQEYEMGEWALHQIAAQLHEQLPEDEAGFIALKFVSNDLNHQQTVNSLAFTQTLASLTKIIFYNLGLDMNVKTPDYQRLVIHLKFFLQRMYAAAPSPLSLKMENYDYVLLKHLQQDYARAYHCMEDVDRFMQQKLAIAIPKNEQIYLTMHIARLAKSFAE
>NC_014334.2|WP_003605785.1|2117310_2119149_-|PTS-glucose-transporter-subunit-IIA
MNESGLAQQLLNLIGGKQNINQVWHCATRLRFTLKDRAKVPKDKIEALDGVITVVEASGQFQVVIGNNVGDVYHEVVKLEPSLSEGETSGETAAQGKMTFKSAFNSLLTFISGVFTPFLGAMAGAGILKGLLSLAVVMGWLTAKSGAYQIWWAAADGIFYFLPIALAFTAAKQLKVNQFVSMAIAAAMVSPGIVALGAKATTIDFFGIPVVPANYTATVLPILLVVVVQKFLEPVFNKLWHESVRNIMAPLCLLVVIVPLTLIVVGPISATVSSWLATAIVSLNKSVPILAGLVLGGFWQVIVIFGVHWALVPVMMNNIAQNGTDLMMPILLPAVLSQAGAALAVFLRTRDAKMKSLAGSSTITALFGITEPTIYGITLKLKKPFYLACVAGAVGGMIVAISGAGANAAALASVLSLPTFIGKGFGLSVVGDVVAFALGTVLTYFFGGINAGAKAKTAPSVNSEPGEALAAPVKGVLVPLTGLADEVFASETMGKGVAIVPENGIVKAPVAGVIRLLYPTGHAIGIQSDKGSEILIHIGIDTVNLKGKHFQPLVAQGQHVEIGTPLVQFDHEAIEKEGYESTVMMIVTNSDQYQIATLGQGATDDRPVMTLA
>NC_014334.2|WP_003588514.1|2115691_2117140_-|family-1-glycosylhydrolase
MTYLNFPKNFLWGGATAANQLEGAYQEDGKGLSIADVLPQGKDRFTIVNRPDFNWTIDKSKYRYPNHQGIDHYHRFKEDIKLFSEMGFKCYRFSIAWSRIFPEGDEKTPNASGLKFYDEVIATCLKYDIEPVVTISHYEMPLHLVTKYGGWKNKRLIEFYKHFAETVLTRYFKQVKYWMTFNEINSAWAFPVMSQGLVANNGGNDKQTIFQAWHNQFVASAWAVKIGHALDPKLQVGCMLLYATTYGYDANPVNQLATLQQNQAFNFFCGDVQVRGEYPAYTDALMADNGFKFTDLDFSAEELTLLKNHPVDYIGFSYYMSAVVETVEKEHAEVGGNLLSGIKNPFLKASEWGWQIDPIGLRIALNQLYERYRKPLFIVENGLGAVDKPDADGKIKDDYRIDYLKQHIEQMGAAIHDGVDLMGYTPWGCIDLVSASSGQMSKRYGFIYVDLDDAGQGSLNRYKKQSFNWYQRVIASNGTDLG
>NC_014334.2|WP_003605783.1|2114998_2115565_-|TetR/AcrR-family-transcriptional-regulator
MDTREKLVATAASLFQKEGVRATGLAQILTVSGTPKGSLYYYFPNGKAQLIEAAITYAGQHILEHVQQDLDRYKAPDAALAGQLESMATEMQEKGHLGGNSISLIALETGDDPELQAACSAVFTQLETLYIKKLTSAGIPPDRAQPLGQFIQASIEGAIILAATKNNPDLLRQTADQLTRLIKLALAA
>NC_014334.2|WP_003605782.1|2113289_2114708_-|multidrug-efflux-MFS-transporter
MQLSQTKEMPQARVHVAHPAMTMIGLMIGAFVGMFSETSLNIALPSLMTALNVSQGTIQWLVTGYMLVIGICMPLSSLLSKWFNTKKIILFALGAFILGSVVSAMGAVFPVVLIGRLIQGIGTGLILPLMFSVAMQIFPPYKLGTVMGMAALVIMFAPAIGPTITGLVLAKFTWHYIFWLFVPFLVLAFIFTLTSMENVYQQTQTPVDWLSIVESSIGFAGIVVGTTMASDAGWLSLEVGLALLVGVIGLVLYARRQLSLTNPMLNLRVFANKQFTVGTLLVMLDFGVILASMYLLPMYLQRVMGLPVAMTGLVMLPGGIVNAAVSAIAGRMYDSHGAKWLSRGGFVIAILGVLILLNSGAQSPLWWIILGHVVLMIGAPLAMSPAQTYGLNSLSGAESADGSALLNTLQQIVGAVSTAVATSMLALGSAKAAGQTGLTIGSHFGFVFVLILAIIGLIVAFQVKKPQASRDL
>NC_014334.2|WP_003605781.1|2111752_2113084_-|NAD(P)/FAD-dependent-oxidoreductase
MSEYDFDVLYLGSGHGAFDGAGPLAASGKKVGVIESDMIGGTCPNYGCNAKITLDTPVVLQRMAERMQGIVSGSITINWSELVAHKQAVIKPLPTNIGSNLKQTGVTIIHGHGKFIDPHSITVAGKTYTAENIVIATGRRPHHLDIPGTELAHDSRAFMDLKTLPKRIGILGSGYISMEFATIANAAGAEVSVFMHADKALREFHQPFVKAVMADMTKRGVKFIPSADVQALKQTAQGIAIQYGDHQEQQVDWVLDATGRIPNDDQIGLEAAGVTFSQRGIPVDDHLRTNVPNIFASGDVLDKPQPKLTPTATFESYYLYQLLSGQTTEPIDYPAIPSTVYTTPRIAKVGVTPEEAADGDYQVVRNHIPDDWYHQTDQETMGDSILIFDRDHHLVGATEFSAQAEDAINTLLPAIVFHFSKQQMWQMAHIFPSESAAAWHKIR
>NC_014334.2|WP_003604680.1|2127187_2127865_-|type-II-A-CRISPR-associated-protein-Csn2
MNLAYYPFQLITTKPSEVTVIDTASPKVLTDLIEALRNDLDKVVLSNDQLEPQEIRKASLWIGDPMLELDLDKLFQRLIYKRMELLIENQRLVELIDQSQQMAMYLLQDPFLSDLPVTVEPGGKLEQIMKYCNVHFDEAVTTESTSKIEALIQTLTKLEEKKLVILTNVSHYLSARDFSSVTEQIGDTELQVVLIEFSKVNRKKYFEKCQYIYIDEDFVDNRELD
>NC_014334.2|WP_003586314.1|2127861_2128167_-|CRISPR-associated-endonuclease-Cas2
MRLMIMFDLPVLTSENRRNYRKFRKALINEGFLMMQYSIYVRVCSTKKSAEFLEHRIAAMKPPIGTVQTLMVTEAQYQAMHFLVGEAKQDIRNSADRTVII
>NC_014334.2|WP_003588545.1|2128144_2129050_-|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSLIVTQHCKVTTKNRTLVVQTDGEVNNVPIEDINQVVFTTTRALLSADAITTLAEANAKVIFSGRDGQPVTETTNLYSDRRKADLVRLQVNWPKSLVENLWTKIVAAKVSNQAQVTKLCGFDNQSLLDDLDTLEINDRSNREATAARKYFKLIFGDDFSRSDICATNAALNYGYSILLSTTNRAIVSAGHITEIGMHHSSVANQYNLGSDLMEPFRPAIDYWVANQKFTDLTPNIKYGLIALLNLEVTFNGKKALLQNALDEHVENCLAYLDGKRNNCRIEVEFPNEVSSDAFNDHV
>NC_014334.2|WP_012491871.1|2129247_2133333_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTKLGKPYGIGVDIGSNSIGFAAVDENSHLIRLKGKTVIGARLFEEGKAAADRRASRTTRRRLSRNRWRLSFLRDFFESHITPTGPNFFMRQKYSEISPKDKARYKYEKRLFNDRTDAEFYQQYPTMYHLRNRLLTDPSKADVREIYFAIHHILKSRGHFLTSGYAKDFNTNKVALNEIFPALQDAYAQVYPDLDITFDENKVNEFKTVLLNEKATPSDTQRALVNLLLAEDGDKDILKQQKQVLTEFAKAVVGLKTKLNVALGTEVDSSEATVWNFSLGQLDDKWAGIESAMTDEGTEILDQIRDLYRARLLNGIVPAGKTLSQAKVDDYAQHHEDLELFKDYLKQLEDDGTAKAIRQLYDRYIDGDDAKPFVREDFVKALTKEVTAHPNAKSPELLERLAQPDFMLKQRNKANGAIPVQMQQRELDQIIKNQSVYYDWLAAPNPVEKHRKSMPYQLDELLNFRIPYYVGPLVTAKEQKAAQGGVFAWMVRKDPDGNITPYNFDEKVDREASANTFIQRMKTTDTYLIGEDVLPKQSLLYQRYEVLNELNNVRVNNEKLSIEQKQQVIRELFERHNSVTIKQFAENLRAHGDYAHIPEIRGLADEKRFLSSLSTYRQLKSLLPDAIDDPAKQADIENIIAWSTVFEDAAIFKTKLKEINWLDSQTITKLSNIRYRGWGQFSHKFLNGLTLGNGHTIIQELFLSNNNLMQILTDETLQKKMTELNADKLKAANINDAIDDAYTSPSNKKALRQVLRVIEDIKRAADGQDPSWLYVETADGGGTPGKRTRARQHQLQEIYANAAHELIDSAVRGELEDKIADKADFNDRLVLYFMQGGRDIYTGTPLNIDQLSSYDIDHILPQSLIKDNSLDNRVLVHAIINREKNATFASTIYAQKMNATWRQWHEAGLISGRKLRNLQMRPDQIDKYASGFVARQLVETRQIIKLTEQIVAAQYPETKIIAVKAGLSHQLREELEFPKNRDVNHYHHAFDAFLAARIGTYLLKRFPNLQAFFTYGKFKKADVKKLRGFNFIRDITHAEDKIVVKDTGEVIWDKKRDVDELDRIYNFKRMLITHEVHFEKADLFKQTVYGAKDSKEAGGKKQLISKKKGYPVDIYGGYTQETGSYLSVVRLTKKAMYAVVKVSTRDAAKLAVAKSISEQKENETLNDIIDEKLSKISKNGKITHELFEVVLPRVGQKTLFKNSKYNLFLVNSDTYMHNYQELWMPREYQKMWKDISLSKYGDAQTEDQLDQIFGFIVSQVNSYFNLYDINQFRKKLNDAADKFATLPMRDTDDMQGKIATIGQLLIGLQANAARSDLRNLDIKTPLGLLQIPNGISLDSDTSVVYQSPTGLLEREVHLSDL
>NC_014334.2|WP_003580491.1|2133495_2134290_-|hypothetical-protein
MEATKLAKRKQWPVPFSQTEPHFTFNNWLKFFSVVLFTYLLFYTRNPIGGFFNMSGTTFLNVANGWTRAVVVFGGVLYCAIIFAGAVWAAGWDGLSQLFASFRWRDIWYVFAYGILYLIATTLGGILGDLVPIRFGVDFVNTLEAAQFGNLGAFSLISFRAFFMTLATQLTAVMIFLASQQLFSRLAIKHRRWALFLTYLLALAVTAVVTTTPLAPHVFVNIASGLVAQLPLYWVYRRSRNILVVTLSAFILMHVMIGLAVMLG
>NC_014334.2|WP_003566938.1|2134290_2135457_-|hypothetical-protein
MSRQNLMILIVDLVLIIIFIGGFGWGIGTVKRYQVEPNTSRTETNTDSLYSESRFEKTLKKFKRLDLMVRLGPVKDAKTFNYTPDEFNVKYSSQPIVPGLKATKTLNAETGEVEVCTTMTPQGVTVAGDYLLTTAYDHDGFHNSVMYIQDLKTGKLLNTVVLNGRPHVGGLTYDAKNDNIWICGRRNNAAEVFAIKLKTALTYNVDKKAKAVAYSQRAQLGNISRASFVTYYENALFVGFFNPTGKGNIQRYPLNDKGQVVGKSLTSSISNQFDVLTQSVLHQDILSKIQGMAFYGDYTILSQSYGGGNSTLYIFKTDPKKTIFRASDAIDTFDMPSHLEQISTHDGRMYMMFESAAYAYRHRSTNQLDRVLSMNLEGFVQLVLKEEK
>NC_014334.2|WP_003588552.1|2135680_2136055_+|YxeA-family-protein
MNMKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAPRDIDYAYTQMAYDEKGHGTEVDFNGHKSRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKLNR
>NC_014334.2|WP_003566944.1|2136248_2136572_+|DUF4870-domain-containing-protein
MTNEHKVLRGLSYISVIFAPILFPILVWIFTPQGSVTRDTAKHALWLHIIPTLLSIFIFMIIGGVGFFTNSINATSAVSLILLLVAMVVDIGMVVYNIYTGIKIITS
>NC_014334.2|WP_003588557.1|2136643_2138371_-|thiol-reductant-ABC-exporter-subunit-CydC
MHWLKNEHWVRPDLKRYRGLLFWSLILGIMTFVFAGALMFTSGFLIDKSATKPLFAAIYVTVVLTRAFGIGRPVFQYIERLTSHNWVLRITSHMRRKLYKVLETDAAFVSEHHQTGDILGLLADDIGHIQNLYLRMIFPTVVGAGLTVIATLLLGWFNWGFALWIMLLLLFQVLILPWWGLVVERFRKAEQKQLNHDAYVSLTDSVLGLSDWVITHREKDFMSQSLAAPKKLAASTVKSKRFQWRRDFVGQLLFVLIVISMLIWTNLEWTGNQASANWVGAFVLVVFPLDQAFSGIAQGVGEWPTYRDAIRHLNDLQPVTRQLPQQQAVPTQFKEMTLQHLSFQYTPKDPELITDIDLTVHSGEKIAILGPSGMGKTTLLQLVLGDLTPTTGNVLIDGQDVLTYQQHRTNLFAVLDQSPFLFNTSIVNNVRLGNEQASDADVAAALKAVKLDQLVAQLPNGINSSVEEAGFGFSGGERQRLSLARILLQDAPIVLLDEPTVGLDPITEQALLETMFTVLQGKTILWVTHHLQGVNQTDRVIFLEDGRLTMNDTPSHLAKNDERYQNLYALDAGLR
>NC_014334.2|WP_003580501.1|2138351_2140094_-|thiol-reductant-ABC-exporter-subunit-CydD
MIDKTLMRLSGMKRIMTMLAGFALVQAFVILLQGKFLAEGIVHSWNRQSLAGLWLPLGLFATAFVIRQLIVWVRNRIGARFAMTSSAWLQAQLLKHLYALGPAAVAKEGTGNLVTMALDGIPEAENYIELILNKILNMSIIPWVLVAYIWYENWLTGFTLLIMFPIIILFMVILGLAAQDKSESQYAGFQKMSNHFIDSLRGLKTLQLMGISRQYANNVYDVSEDYRKQTMGVLRIAMLSTFALDFFTTLSIAVVAVFLGIKLMDGAIPLYPAMVALILAPEYFMPIRDFGTDYHATLNGKNAMKAIWQVIDQPLPTDTNVLPAFSRWRAQDTVTINHLDFTYPNERAGIQNANLQFTGTEKVAIIGASGSGKSTLLNLIGGFLQPQKAAMTVRGTKVPHMTQAAWQDHLSYIPQDPYLFADTITANIRFYRPDASDEDVKQAAEAAGLSHWIETLADGYATRIGEGGRGISGGQAQRIALARTLIDTNRSIWLFDEPTAHLDIETEAELKETLVPLFKNRLVIFATHRLHWLNQMDRVIVVDGGKIIAEGTPSELAAHSKPYQALVHEMRGEFNALVEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NZ_CP043521	Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_09, complete sequence	1486-1515	0	1.0
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	NZ_CP016706	Lactococcus lactis subsp. lactis strain UL8 plasmid pUL8C, complete sequence	132-161	1	0.967
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	NC_004981	Lactococcus lactis ML8 plasmid pCL2.1, complete sequence	1454-1483	1	0.967
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	CP016703	Lactococcus lactis subsp. lactis strain C10 plasmid pC10A, complete sequence	132-161	1	0.967
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	NZ_CP016712	Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109F, complete sequence	132-161	1	0.967
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	CP007042	Lactococcus lactis subsp. lactis KLDS 4.0325 plasmid unnamed2, complete sequence	132-161	1	0.967
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NC_021574	Lactobacillus paracasei plasmid pLP5403, complete sequence	102-131	1	0.967
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NC_004992	Leuconostoc lactis plasmid pCI411, complete sequence	222-251	1	0.967
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	MN730093	Lactobacillus plantarum strain PC518 plasmid pLP224, complete sequence	694-723	1	0.967
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NC_013789	Lactobacillus plantarum plasmid pXY3, complete sequence	1478-1507	1	0.967
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NC_012548	Lactobacillus brevis plasmid pLB925A01, complete sequence	60-89	1	0.967
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NC_016635	Pediococcus claussenii ATCC BAA-344 plasmid pPECL-1, complete sequence	848-877	1	0.967
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NZ_MG944248	Lactobacillus plantarum strain LP27 plasmid pLP27, complete sequence	1309-1338	2	0.933
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NZ_CP013170	Lactobacillus plantarum strain MF1298 plasmid pMF1298-14, complete sequence	1641-1670	2	0.933
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	NC_004992	Leuconostoc lactis plasmid pCI411, complete sequence	1778-1807	4	0.867
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	NC_006399	Lactobacillus plantarum BIFI-38 plasmid pPB1, complete sequence	823-852	4	0.867
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NZ_CP021476	Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-5	680-709	4	0.867
NC_014334_6	6.2\|2126174\|30\|NC_014334\|CRISPRCasFinder,CRT	2126174-2126203	30	NZ_CP021954	Klebsiella pneumoniae strain AR_0148 plasmid tig00001025alt_u_pilon, complete sequence	7530-7559	6	0.8
NC_014334_6	6.2\|2126174\|30\|NC_014334\|CRISPRCasFinder,CRT	2126174-2126203	30	KJ801817	Enterococcus phage ECP3, complete genome	49229-49258	6	0.8
NC_014334_6	6.2\|2126174\|30\|NC_014334\|CRISPRCasFinder,CRT	2126174-2126203	30	AP018715	Enterococcus phage phiM1EF22 DNA, complete sequence	47479-47508	6	0.8
NC_014334_6	6.2\|2126174\|30\|NC_014334\|CRISPRCasFinder,CRT	2126174-2126203	30	AP018714	Enterococcus phage phiEF17H DNA, complete sequence	49325-49354	6	0.8
NC_014334_6	6.4\|2126306\|30\|NC_014334\|CRISPRCasFinder,CRT	2126306-2126335	30	MT074431	Salmonella phage demigod, complete genome	324-353	6	0.8
NC_014334_6	6.4\|2126306\|30\|NC_014334\|CRISPRCasFinder,CRT	2126306-2126335	30	NC_023608	Salmonella phage vB_SenS-Ent2 complete genome	38327-38356	6	0.8
NC_014334_6	6.7\|2126504\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126504-2126533	30	NZ_CP025942	Bacillus subtilis strain BJ3-2 plasmid unnamed, complete sequence	14925-14954	6	0.8
NC_014334_6	6.7\|2126504\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126504-2126533	30	NZ_CP032854	Bacillus subtilis subsp. subtilis strain MH-1 plasmid unnamed1, complete sequence	22350-22379	6	0.8
NC_014334_6	6.10\|2126702\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126702-2126731	30	NZ_CP044989	Deinococcus sp. AJ005 plasmid p380k, complete sequence	37361-37390	6	0.8
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NZ_CP019714	Lactobacillus plantarum strain Q7 plasmid unnamed2, complete sequence	1-25	6	0.8
NC_014334_6	6.3\|2126240\|30\|NC_014334\|CRISPRCasFinder,CRT	2126240-2126269	30	NZ_CP040994	Klebsiella pneumoniae strain FDAARGOS_775 plasmid unnamed2, complete sequence	82003-82032	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	NZ_CP024432	Klebsiella pneumoniae strain DA48896 plasmid p48896_3, complete sequence	4571-4600	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	MN850636	Escherichia phage dune, complete genome	1809-1838	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	MN994503	Phage NBSal004, complete genome	85324-85353	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	MN276049	Acinetobacter phage BS46, complete genome	18590-18619	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	MN850635	Escherichia phage bumzen, complete genome	78333-78362	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	MK962758	Shigella phage JK55, complete genome	13485-13514	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	MN850610	Escherichia phage andreotti, complete genome	82701-82730	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	MH586731	Salmonella phage Meda, complete genome	73215-73244	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	GU169904	Staphylococcus phage SA1, complete genome	134989-135018	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	MG675557	Pseudoalteromonas phage Maelstrom, complete genome	9714-9743	7	0.767
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	MN850647	Escherichia phage tootiki, complete genome	55425-55454	7	0.767
NC_014334_6	6.15\|2127032\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127032-2127061	30	NC_004341	Weissella cibaria plasmid pKLCB, complete sequence	1979-2008	7	0.767
NC_014334_6	6.5\|2126372\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126372-2126401	30	NZ_CP030832	Neorhizobium sp. NCHU2750 plasmid pNCHU2750d, complete sequence	25343-25372	8	0.733
NC_014334_6	6.8\|2126570\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126570-2126599	30	AP014435	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22C-MedDCM-OCT-S41-C155, * SEQUENCING IN PROGRESS *, 2 ordered pieces	10947-10976	8	0.733
NC_014334_6	6.8\|2126570\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126570-2126599	30	AP013443	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C22C-MedDCM-OCT-S23-C7	19838-19867	8	0.733
NC_014334_6	6.8\|2126570\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126570-2126599	30	AP014428	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S29-C101, * SEQUENCING IN PROGRESS *, 7 ordered pieces	8798-8827	8	0.733
NC_014334_6	6.8\|2126570\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126570-2126599	30	NZ_CP015354	Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence	45187-45216	8	0.733
NC_014334_6	6.12\|2126834\|30\|NC_014334\|CRISPRCasFinder,CRT	2126834-2126863	30	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	582633-582662	8	0.733
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	NZ_CP033346	Salmonella enterica subsp. enterica serovar Tennessee strain CFSAN076210 plasmid pCFSAN076210, complete sequence	105588-105617	8	0.733
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	286909-286938	8	0.733
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	NZ_CP014995	Salmonella enterica subsp. enterica serovar Tennessee strain CFSAN001387 plasmid, complete sequence	87587-87616	8	0.733
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	608672-608701	8	0.733
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	MK614706	Gammaproteobacteria virus GOV_bin_2604, complete genome	46357-46386	8	0.733
NC_014334_6	6.16\|2127098\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127098-2127127	30	MK250016	Prevotella phage Lak-A1, complete genome	116755-116784	8	0.733
NC_014334_6	6.16\|2127098\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2127098-2127127	30	MK250019	Prevotella phage Lak-A2, complete genome	39881-39910	8	0.733
NC_014334_6	6.2\|2126174\|30\|NC_014334\|CRISPRCasFinder,CRT	2126174-2126203	30	LR135896	uncultured phage genomic DNA containing rbcL region region	22390-22419	9	0.7
NC_014334_6	6.3\|2126240\|30\|NC_014334\|CRISPRCasFinder,CRT	2126240-2126269	30	KY794643	Staphylococcus phage vB_Sau_S24, complete genome	22254-22283	9	0.7
NC_014334_6	6.3\|2126240\|30\|NC_014334\|CRISPRCasFinder,CRT	2126240-2126269	30	KY794642	Staphylococcus phage vB_Sau_Clo6, complete genome	22239-22268	9	0.7
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	AP013374	Uncultured Mediterranean phage uvMED DNA, complete genome, group G13, isolate: uvMED-CGR-C78-MedDCM-OCT-S42-C9	3292-3321	9	0.7
NC_014334_6	6.14\|2126966\|30\|NC_014334\|CRISPRCasFinder,CRT,PILER-CR	2126966-2126995	30	AP013577	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C78-MedDCM-OCT-S37-C5, * SEQUENCING IN PROGRESS *	22447-22476	9	0.7

1. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043521 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_09, complete sequence) position: , mismatch: 0, identity: 1.0

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
ttgccatttttaaagcaatgcgcacttaca	Protospacer
******************************

2. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016706 (Lactococcus lactis subsp. lactis strain UL8 plasmid pUL8C, complete sequence) position: , mismatch: 1, identity: 0.967

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
tttgttgtttcgttaatatctttatcatgc	Protospacer
**.***************************

3. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NC_004981 (Lactococcus lactis ML8 plasmid pCL2.1, complete sequence) position: , mismatch: 1, identity: 0.967

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
tttgttgtttcgttaatatctttatcatgc	Protospacer
**.***************************

4. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to CP016703 (Lactococcus lactis subsp. lactis strain C10 plasmid pC10A, complete sequence) position: , mismatch: 1, identity: 0.967

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
tttgttgtttcgttaatatctttatcatgc	Protospacer
**.***************************

5. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016712 (Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109F, complete sequence) position: , mismatch: 1, identity: 0.967

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
tttgttgtttcgttaatatctttatcatgc	Protospacer
**.***************************

6. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to CP007042 (Lactococcus lactis subsp. lactis KLDS 4.0325 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.967

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
tttgttgtttcgttaatatctttatcatgc	Protospacer
**.***************************

7. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NC_021574 (Lactobacillus paracasei plasmid pLP5403, complete sequence) position: , mismatch: 1, identity: 0.967

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
ttgctatttttaaagcaatgcgcacttaca	Protospacer
****.*************************

8. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NC_004992 (Leuconostoc lactis plasmid pCI411, complete sequence) position: , mismatch: 1, identity: 0.967

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
ttgctatttttaaagcaatgcgcacttaca	Protospacer
****.*************************

9. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MN730093 (Lactobacillus plantarum strain PC518 plasmid pLP224, complete sequence) position: , mismatch: 1, identity: 0.967

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
ttgctatttttaaagcaatgcgcacttaca	Protospacer
****.*************************

10. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NC_013789 (Lactobacillus plantarum plasmid pXY3, complete sequence) position: , mismatch: 1, identity: 0.967

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
ttgctatttttaaagcaatgcgcacttaca	Protospacer
****.*************************

11. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NC_012548 (Lactobacillus brevis plasmid pLB925A01, complete sequence) position: , mismatch: 1, identity: 0.967

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
ttgctatttttaaagcaatgcgcacttaca	Protospacer
****.*************************

12. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NC_016635 (Pediococcus claussenii ATCC BAA-344 plasmid pPECL-1, complete sequence) position: , mismatch: 1, identity: 0.967

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
ttgctatttttaaagcaatgcgcacttaca	Protospacer
****.*************************

13. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG944248 (Lactobacillus plantarum strain LP27 plasmid pLP27, complete sequence) position: , mismatch: 2, identity: 0.933

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
ttgctatttttaaagcaatgcgcacttata	Protospacer
****.***********************.*

14. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013170 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-14, complete sequence) position: , mismatch: 2, identity: 0.933

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
ttgctgtttttaaagcaatgcgcacttaca	Protospacer
****..************************

15. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NC_004992 (Leuconostoc lactis plasmid pCI411, complete sequence) position: , mismatch: 4, identity: 0.867

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
tcagtcgtttcgtttatatctttatcatgc	Protospacer
*. **.******** ***************

16. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NC_006399 (Lactobacillus plantarum BIFI-38 plasmid pPB1, complete sequence) position: , mismatch: 4, identity: 0.867

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
tcagtcgtttcgtttatatctttatcatgc	Protospacer
*. **.******** ***************

17. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021476 (Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-5) position: , mismatch: 4, identity: 0.867

-ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
attgctg-ttttaaagcaatgtgcacttaca	Protospacer
 ****.. *************.*********

18. spacer 6.2|2126174|30|NC_014334|CRISPRCasFinder,CRT matches to NZ_CP021954 (Klebsiella pneumoniae strain AR_0148 plasmid tig00001025alt_u_pilon, complete sequence) position: , mismatch: 6, identity: 0.8

tccatggtaaaaacctcctattattttgtt	CRISPR spacer
tctaacataaaaatctccttttattttgtt	Protospacer
**.*  .******.***** **********

19. spacer 6.2|2126174|30|NC_014334|CRISPRCasFinder,CRT matches to KJ801817 (Enterococcus phage ECP3, complete genome) position: , mismatch: 6, identity: 0.8

-tccatggtaaaaacctcctattattttgtt	CRISPR spacer
acccatta-aaaaacctcctactattttgta	Protospacer
 .**** . ************.********

20. spacer 6.2|2126174|30|NC_014334|CRISPRCasFinder,CRT matches to AP018715 (Enterococcus phage phiM1EF22 DNA, complete sequence) position: , mismatch: 6, identity: 0.8

-tccatggtaaaaacctcctattattttgtt	CRISPR spacer
acccatta-aaaaacctcctactattttgta	Protospacer
 .**** . ************.********

21. spacer 6.2|2126174|30|NC_014334|CRISPRCasFinder,CRT matches to AP018714 (Enterococcus phage phiEF17H DNA, complete sequence) position: , mismatch: 6, identity: 0.8

-tccatggtaaaaacctcctattattttgtt	CRISPR spacer
acccatta-aaaaacctcctactattttgta	Protospacer
 .**** . ************.********

22. spacer 6.4|2126306|30|NC_014334|CRISPRCasFinder,CRT matches to MT074431 (Salmonella phage demigod, complete genome) position: , mismatch: 6, identity: 0.8

tgttgcaatcggtgaaagtatcgcgattgc	CRISPR spacer
tgttgcattcggtgaaagtgtcgctttttg	Protospacer
******* ***********.****  **

23. spacer 6.4|2126306|30|NC_014334|CRISPRCasFinder,CRT matches to NC_023608 (Salmonella phage vB_SenS-Ent2 complete genome) position: , mismatch: 6, identity: 0.8

tgttgcaatcggtgaaagtatcgcgattgc	CRISPR spacer
tgttgcattcggtgaaagtgtcgctttttg	Protospacer
******* ***********.****  **

24. spacer 6.7|2126504|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025942 (Bacillus subtilis strain BJ3-2 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

aacatattgatcagcctttct--tcaacgatc	CRISPR spacer
accatattgatcagcatttcttctcaatgg--	Protospacer
* ************* *****  ****.*.

25. spacer 6.7|2126504|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032854 (Bacillus subtilis subsp. subtilis strain MH-1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

aacatattgatcagcctttct--tcaacgatc	CRISPR spacer
accatattgatcagcatttcttctcaatgg--	Protospacer
* ************* *****  ****.*.

26. spacer 6.10|2126702|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044989 (Deinococcus sp. AJ005 plasmid p380k, complete sequence) position: , mismatch: 6, identity: 0.8

cgagaccaacaccagcgcaagcgaacgctt	CRISPR spacer
gaagaccaacaccagcgcaagcgcaagcaa	Protospacer
 .********************* * **

27. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019714 (Lactobacillus plantarum strain Q7 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
ttgctatttttaaagcaatgcgcac-----	Protospacer
****.********************

28. spacer 6.3|2126240|30|NC_014334|CRISPRCasFinder,CRT matches to NZ_CP040994 (Klebsiella pneumoniae strain FDAARGOS_775 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

acgacatagaggttattcattccatttcac	CRISPR spacer
aagacataaaggttattcagtccattgttg	Protospacer
* ******.********** ****** .

29. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024432 (Klebsiella pneumoniae strain DA48896 plasmid p48896_3, complete sequence) position: , mismatch: 7, identity: 0.767

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
agttttgtttctttaatttctttatcattc	Protospacer
  . ******* ***** ********** *

30. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MN850636 (Escherichia phage dune, complete genome) position: , mismatch: 7, identity: 0.767

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
ttgattgtttcgtcaatatctttttcaata	Protospacer
** .*********.********* ***

31. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MN994503 (Phage NBSal004, complete genome) position: , mismatch: 7, identity: 0.767

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
ttgattgtttcgtcaatatctttttcaata	Protospacer
** .*********.********* ***

32. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MN276049 (Acinetobacter phage BS46, complete genome) position: , mismatch: 7, identity: 0.767

ttcgttgtttcgttaatatcttta---tcatgc	CRISPR spacer
gctgttatttcgttaatatctttagactca---	Protospacer
 ..***.*****************   ***

33. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MN850635 (Escherichia phage bumzen, complete genome) position: , mismatch: 7, identity: 0.767

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
ttgattgtttcgtcaatatctttttcaata	Protospacer
** .*********.********* ***

34. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MK962758 (Shigella phage JK55, complete genome) position: , mismatch: 7, identity: 0.767

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
ttgattgtttcgtcaatatctttttcaata	Protospacer
** .*********.********* ***

35. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MN850610 (Escherichia phage andreotti, complete genome) position: , mismatch: 7, identity: 0.767

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
ttgattgtttcgtcaatatctttttcaata	Protospacer
** .*********.********* ***

36. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MH586731 (Salmonella phage Meda, complete genome) position: , mismatch: 7, identity: 0.767

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
ttgattgtttcgtcaatatctttttcaata	Protospacer
** .*********.********* ***

37. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to GU169904 (Staphylococcus phage SA1, complete genome) position: , mismatch: 7, identity: 0.767

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
ttgattgtttcgtcaatatctttttcaata	Protospacer
** .*********.********* ***

38. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MG675557 (Pseudoalteromonas phage Maelstrom, complete genome) position: , mismatch: 7, identity: 0.767

ttcgttg-tttcgttaatatctttatcatgc	CRISPR spacer
-gcgctattttcgtcaatatctttatcatca	Protospacer
  **.*. ******.**************

39. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MN850647 (Escherichia phage tootiki, complete genome) position: , mismatch: 7, identity: 0.767

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
ttgattgtttcgtcaatatctttttcaata	Protospacer
** .*********.********* ***

40. spacer 6.15|2127032|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NC_004341 (Weissella cibaria plasmid pKLCB, complete sequence) position: , mismatch: 7, identity: 0.767

ttgccatttttaaagcaatgcgcacttaca	CRISPR spacer
gaactttgtttaaaacaatgcgcacttaca	Protospacer
  .*. * ******.***************

41. spacer 6.5|2126372|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030832 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750d, complete sequence) position: , mismatch: 8, identity: 0.733

gcgacaatctcccgactgatgatattggcc	CRISPR spacer
ccgcggatctcccgaccgatgatattgaag	Protospacer
 **  .**********.**********.

42. spacer 6.8|2126570|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to AP014435 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22C-MedDCM-OCT-S41-C155, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 8, identity: 0.733

ccataaagttgctaattctagaaatatttt	CRISPR spacer
tggttggtttgctaattctaaaaatatttt	Protospacer
. .* .. ************.*********

43. spacer 6.8|2126570|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to AP013443 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C22C-MedDCM-OCT-S23-C7) position: , mismatch: 8, identity: 0.733

ccataaagttgctaattctagaaatatttt	CRISPR spacer
tggttggtttgctaattctaaaaatatttt	Protospacer
. .* .. ************.*********

44. spacer 6.8|2126570|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to AP014428 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S29-C101, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces) position: , mismatch: 8, identity: 0.733

ccataaagttgctaattctagaaatatttt	CRISPR spacer
tggttggtttgctaattctaaaaatatttt	Protospacer
. .* .. ************.*********

45. spacer 6.8|2126570|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015354 (Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence) position: , mismatch: 8, identity: 0.733

ccataaagttgctaattctagaaatatttt	CRISPR spacer
aaataaagttggtaatactagaaatgtgaa	Protospacer
  ********* **** ********.*

46. spacer 6.12|2126834|30|NC_014334|CRISPRCasFinder,CRT matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 8, identity: 0.733

gccagttgtttaatggataagcctctgata	CRISPR spacer
cccagttgtttaatggatacggcttattga	Protospacer
 ****************** * **.    *

47. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033346 (Salmonella enterica subsp. enterica serovar Tennessee strain CFSAN076210 plasmid pCFSAN076210, complete sequence) position: , mismatch: 8, identity: 0.733

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
cttccggtttcgttaatatctttctcatag	Protospacer
.*. . ***************** ****.

48. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 8, identity: 0.733

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
cgttctgtttcgttaatatctttttcaaga	Protospacer
. . .****************** *** *

49. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014995 (Salmonella enterica subsp. enterica serovar Tennessee strain CFSAN001387 plasmid, complete sequence) position: , mismatch: 8, identity: 0.733

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
cttccggtttcgttaatatctttctcatag	Protospacer
.*. . ***************** ****.

50. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 8, identity: 0.733

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
tcattcgtttctttaatatctttatcaaat	Protospacer
*.  *.***** *************** ..

51. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MK614706 (Gammaproteobacteria virus GOV_bin_2604, complete genome) position: , mismatch: 8, identity: 0.733

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
gtatttatttcgttaatatctatatcagta	Protospacer
 *  **.************** *****

52. spacer 6.16|2127098|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 8, identity: 0.733

gaaatacttgtctcattttttgtgtatgca	CRISPR spacer
gaaatacttgtatcatattttgtatcaatt	Protospacer
*********** **** ******.*  ..

53. spacer 6.16|2127098|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 8, identity: 0.733

gaaatacttgtctcattttttgtgtatgca	CRISPR spacer
gaaatacttgtatcatattttgtatcaatt	Protospacer
*********** **** ******.*  ..

54. spacer 6.2|2126174|30|NC_014334|CRISPRCasFinder,CRT matches to LR135896 (uncultured phage genomic DNA containing rbcL region region) position: , mismatch: 9, identity: 0.7

tccatggtaaaaacctcctattattttgtt	CRISPR spacer
gatatggtaaaagccttctattatttccgc	Protospacer
  .*********.***.*********.  .

55. spacer 6.3|2126240|30|NC_014334|CRISPRCasFinder,CRT matches to KY794643 (Staphylococcus phage vB_Sau_S24, complete genome) position: , mismatch: 9, identity: 0.7

acgacatagaggttattcattccatttcac	CRISPR spacer
cgagcataggggttattcataccattttta	Protospacer
  ..*****.********** ******.

56. spacer 6.3|2126240|30|NC_014334|CRISPRCasFinder,CRT matches to KY794642 (Staphylococcus phage vB_Sau_Clo6, complete genome) position: , mismatch: 9, identity: 0.7

acgacatagaggttattcattccatttcac	CRISPR spacer
cgagcataggggttattcataccattttta	Protospacer
  ..*****.********** ******.

57. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to AP013374 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G13, isolate: uvMED-CGR-C78-MedDCM-OCT-S42-C9) position: , mismatch: 9, identity: 0.7

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
tctattgtttctttaatatctttatttgtt	Protospacer
*...******* *************.   .

58. spacer 6.14|2126966|30|NC_014334|CRISPRCasFinder,CRT,PILER-CR matches to AP013577 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C78-MedDCM-OCT-S37-C5, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.7

ttcgttgtttcgttaatatctttatcatgc	CRISPR spacer
tctattgtttctttaatatctttatttgtt	Protospacer
*...******* *************.   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

19685 : 69627

Paenibacillus_phage(33.33%)

bacteriocin,holin,transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003568480.1\|19685_20543_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003568482.1\|20622_20805_-	hypothetical protein	NA	NA	NA	NA
WP_003659010.1\|20855_21035_-	hypothetical protein	NA	NA	NA	NA
WP_003568484.1\|21523_22759_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_003568486.1\|22962_25536_-	ABC transporter permease	NA	NA	NA	NA
WP_003568488.1\|25548_26250_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-33	40.5
WP_003568490.1\|26529_27081_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003568492.1\|27124_27931_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_013245306.1\|27935_28256_+	hypothetical protein	NA	NA	NA	NA
WP_003568543.1\|28481_29162_+	hypothetical protein	NA	NA	NA	NA
WP_043925644.1\|29094_29598_-	hypothetical protein	NA	NA	NA	NA
WP_003659018.1\|29617_31768_-	DUF1906 domain-containing protein	NA	NA	NA	NA
WP_003568499.1\|32112_32886_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_003568500.1\|33063_33669_+	DUF1211 domain-containing protein	NA	NA	NA	NA
WP_003568502.1\|34008_34233_+	hypothetical protein	NA	NA	NA	NA
WP_003568598.1\|34388_35066_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_003568507.1\|35230_36124_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_003568509.1\|36172_36811_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_013245308.1\|37039_38416_+	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_003562527.1\|38638_38983_-	hypothetical protein	NA	NA	NA	NA
WP_003562540.1\|39058_39418_-	hypothetical protein	NA	NA	NA	NA
WP_013245309.1\|39658_41101_+	C69 family dipeptidase	NA	NA	NA	NA
WP_003562544.1\|41295_41931_+	hypothetical protein	NA	NA	NA	NA
WP_003562546.1\|41980_42292_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003562548.1\|42460_42649_+	hypothetical protein	NA	NA	NA	NA
WP_013245310.1\|42780_43392_-	hypothetical protein	NA	NA	NA	NA
WP_013245311.1\|43748_44222_+	hypothetical protein	NA	NA	NA	NA
WP_013245312.1\|44418_44952_+	hypothetical protein	NA	NA	NA	NA
WP_013245314.1\|45387_46437_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_013245315.1\|46433_47171_-	hypothetical protein	NA	NA	NA	NA
WP_003562555.1\|47382_48093_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_003577245.1\|48079_48409_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_013245316.1\|49289_49505_-	hypothetical protein	NA	NA	NA	NA
WP_011673954.1\|49860_50736_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003562571.1\|51081_51732_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_003572914.1\|52129_52822_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_016386482.1\|53098_53455_+	hypothetical protein	NA	NA	NA	NA
WP_003572918.1\|53519_53840_+	hypothetical protein	NA	NA	NA	NA
WP_013245319.1\|54028_54904_-	Rgg/GadR/MutR family transcriptional regulator	A0A1X9I6E0	Streptococcus_phage	2.3e-11	27.3
WP_013245320.1\|54996_56589_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.3e-12	29.0
WP_013245321.1\|56934_58308_-	MFS transporter	NA	NA	NA	NA
WP_013245322.1\|58485_58809_-	hypothetical protein	NA	NA	NA	NA
WP_013245323.1\|59661_60417_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	3.9e-31	37.7
WP_123796487.1\|60392_61289_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	6.7e-30	36.3
WP_013245326.1\|61497_64815_-	MMPL family transporter	NA	NA	NA	NA
WP_003562586.1\|64811_65414_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003572931.1\|65664_65925_-	hypothetical protein	NA	NA	NA	NA
WP_003562592.1\|66138_66801_-	ABC transporter permease	NA	NA	NA	NA
WP_003562594.1\|66800_67730_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003568628.1\|67741_68371_-	ABC transporter permease	NA	NA	NA	NA
WP_012490780.1\|68373_69627_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.5e-14	43.0

DBSCAN-SWA_2

950570 : 992859

Staphylococcus_phage(21.43%)

transposase,terminase,tail,portal,integrase,head,capsid

attL 975972:975988|attR 989714:989730

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_123796487.1\|950570_951467_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	6.7e-30	36.3
WP_013245590.1\|951695_954488_-	cation-transporting P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	2.4e-73	29.2
WP_003658467.1\|954602_955247_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003564376.1\|955285_956425_-	ABC transporter permease	NA	NA	NA	NA
WP_003564378.1\|956414_957149_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-27	35.8
WP_003564381.1\|957412_958270_+	TIGR00159 family protein	NA	NA	NA	NA
WP_016386672.1\|958266_959352_+	hypothetical protein	NA	NA	NA	NA
WP_003564385.1\|959373_960738_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_003569704.1\|961053_962865_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1GV45	Paramecium_bursaria_Chlorella_virus	4.4e-89	37.5
WP_003658460.1\|962842_962983_-	hypothetical protein	NA	NA	NA	NA
WP_003658458.1\|963072_964878_-	M3 family oligoendopeptidase	NA	NA	NA	NA
WP_003564394.1\|964952_965444_+	VanZ family protein	NA	NA	NA	NA
WP_003564397.1\|965514_966246_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003569709.1\|966369_967236_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_013245593.1\|967232_968186_+	type II secretion system F family protein	NA	NA	NA	NA
WP_003564402.1\|968188_968512_+	type II secretion system protein	NA	NA	NA	NA
WP_003564404.1\|968508_968949_+	hypothetical protein	NA	NA	NA	NA
WP_003594020.1\|968993_969230_+	hypothetical protein	NA	NA	NA	NA
WP_013245594.1\|969189_969651_+	type II secretion system protein	NA	NA	NA	NA
WP_003564410.1\|969634_969967_+	hypothetical protein	NA	NA	NA	NA
WP_003598234.1\|970069_971080_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003604785.1\|971298_971757_+	hypothetical protein	NA	NA	NA	NA
WP_013245595.1\|971895_973284_+	amino acid permease	NA	NA	NA	NA
WP_003564418.1\|973483_974248_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_013245596.1\|974244_975084_+	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_003578518.1\|975084_976041_+	glycosyltransferase family 8 protein	NA	NA	NA	NA
975972:975988	attL	NA	NA	NA	NA
WP_003569724.1\|976037_976907_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_013245597.1\|977184_979476_+	alpha-galactosidase	NA	NA	NA	NA
WP_003569727.1\|979746_980055_-	hypothetical protein	NA	NA	NA	NA
WP_013245598.1\|980326_981475_-\|integrase	site-specific integrase	A0A097BYJ7	Leuconostoc_phage	9.2e-32	29.6
WP_048481301.1\|981638_982211_-	helix-turn-helix domain-containing protein	E9LUL4	Lactobacillus_phage	7.3e-06	38.0
WP_013245601.1\|982346_982622_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013245602.1\|982691_982913_+	hypothetical protein	NA	NA	NA	NA
WP_013245604.1\|983023_983215_+	hypothetical protein	NA	NA	NA	NA
WP_013245605.1\|983259_983535_+	hypothetical protein	NA	NA	NA	NA
WP_013245606.1\|983531_983720_+	hypothetical protein	NA	NA	NA	NA
WP_043925799.1\|983703_984531_+	bifunctional DNA primase/polymerase	Q854C1	Mycobacterium_phage	2.6e-12	31.8
WP_013245608.1\|984523_985948_+	virulence protein	A0A1W6JQD6	Staphylococcus_phage	2.3e-64	38.1
WP_013245609.1\|986220_986562_+	hypothetical protein	NA	NA	NA	NA
WP_013245610.1\|986644_987019_+	HNH endonuclease	D2JLE2	Staphylococcus_phage	4.9e-11	39.8
WP_013245611.1\|987143_987614_+\|terminase	phage terminase small subunit P27 family	M1PKP2	Streptococcus_phage	1.6e-06	29.3
WP_013245612.1\|987610_989314_+\|terminase	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	7.3e-118	41.7
WP_013245613.1\|989279_989459_+	hypothetical protein	NA	NA	NA	NA
WP_013245614.1\|989463_990648_+\|portal	phage portal protein	E9LUI2	Lactobacillus_phage	2.2e-52	32.9
989714:989730	attR	NA	NA	NA	NA
WP_013245615.1\|990634_992188_+\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	1.9e-40	25.8
WP_003586097.1\|992243_992534_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_013245616.1\|992517_992859_+\|head	phage head closure protein	I7AUE6	Enterococcus_phage	1.2e-08	38.4

DBSCAN-SWA_3

1947018 : 2016693

Escherichia_phage(14.29%)

integrase,transposase,protease

attL 1987042:1987069|attR 2027172:2027199

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003605591.1\|1947018_1949169_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A0A8J958	Klebsiella_phage	2.3e-121	36.7
WP_013245899.1\|1949786_1950629_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.7e-33	39.1
WP_013245900.1\|1950703_1951729_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.1e-71	43.8
WP_013245901.1\|1951731_1952304_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.1e-33	43.0
WP_013245902.1\|1952315_1953188_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	2.5e-98	58.9
WP_013245903.1\|1953387_1954152_-	tyrosine protein phosphatase	NA	NA	NA	NA
WP_013245904.1\|1954329_1955226_+	LCP family protein	NA	NA	NA	NA
WP_013245905.1\|1955363_1956341_+	hypothetical protein	NA	NA	NA	NA
WP_013245906.1\|1956657_1957854_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	8.7e-09	23.3
WP_003585301.1\|1958027_1958225_+	hypothetical protein	NA	NA	NA	NA
WP_003585300.1\|1958199_1958553_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_043925927.1\|1958653_1960156_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_013245908.1\|1960416_1961085_-	sugar transferase	NA	NA	NA	NA
WP_013245909.1\|1961405_1962326_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.6e-21	34.5
WP_013245910.1\|1962419_1963361_-	glycosyltransferase	NA	NA	NA	NA
WP_013245911.1\|1963329_1964616_-	hypothetical protein	NA	NA	NA	NA
WP_013245912.1\|1964707_1966138_-	flippase	NA	NA	NA	NA
WP_016373038.1\|1966183_1967329_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_013245914.1\|1967303_1968167_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_013245915.1\|1968172_1968988_-	LicD family protein	A0A1V0SAS8	Catovirus	6.8e-05	36.8
WP_013245916.1\|1969006_1969705_-	acyltransferase	NA	NA	NA	NA
WP_013245917.1\|1969706_1970678_-	glycosyl transferase	A0A2N9QVY2	Dishui_lake_phycodnavirus	3.5e-08	30.6
WP_013245918.1\|1970726_1971893_-	DUF1972 domain-containing protein	NA	NA	NA	NA
WP_013245919.1\|1972041_1972791_-	CpsD/CapB family tyrosine-protein kinase	NA	NA	NA	NA
WP_013245920.1\|1972810_1973725_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_013245921.1\|1974086_1974806_+	acyltransferase	NA	NA	NA	NA
WP_003580148.1\|1975086_1975587_-	QueT transporter family protein	NA	NA	NA	NA
WP_013245923.1\|1975698_1976412_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
WP_003566696.1\|1976408_1976633_-	DUF2829 domain-containing protein	A8AT88	Listeria_phage	1.0e-08	34.4
WP_003566698.1\|1976917_1977229_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003570958.1\|1977488_1978127_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_003570960.1\|1978435_1979413_-	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	5.8e-11	34.1
WP_013245925.1\|1979414_1980467_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.6e-20	33.0
WP_003566706.1\|1980478_1981477_-	ABC transporter permease	NA	NA	NA	NA
WP_003566708.1\|1981476_1982400_-	ABC transporter permease	NA	NA	NA	NA
WP_013245926.1\|1982574_1984197_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003566712.1\|1984628_1986053_-	MFS transporter	NA	NA	NA	NA
WP_013245928.1\|1986286_1986850_-	elongation factor P	NA	NA	NA	NA
1987042:1987069	attL	NA	NA	NA	NA
WP_013245930.1\|1987669_1988377_-	lactate utilization protein C	NA	NA	NA	NA
WP_013245931.1\|1988369_1989854_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_003570970.1\|1989850_1990633_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_003566723.1\|1991103_1991670_+	hypothetical protein	NA	NA	NA	NA
WP_013245933.1\|1991921_1992257_-	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_013245936.1\|1993522_1993933_-	DUF3284 domain-containing protein	NA	NA	NA	NA
WP_011674746.1\|1993904_1994111_-	hypothetical protein	NA	NA	NA	NA
WP_003566732.1\|1994107_1995532_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_013245938.1\|1996395_1998618_+	alpha-galactosidase	NA	NA	NA	NA
WP_013245939.1\|1998680_1999424_+	peroxide stress protein YaaA	NA	NA	NA	NA
WP_013245940.1\|1999700_2000447_+	DUF2087 domain-containing protein	NA	NA	NA	NA
WP_013245941.1\|2000792_2003375_-	AAA family ATPase	U5J9B0	Bacillus_phage	2.6e-50	25.4
WP_013245942.1\|2003415_2004006_-	hypothetical protein	NA	NA	NA	NA
WP_013245943.1\|2004432_2005038_+	WxL domain-containing protein	NA	NA	NA	NA
WP_003607260.1\|2005969_2006782_-	sugar kinase	NA	NA	NA	NA
WP_013245946.1\|2007784_2008591_-	hypothetical protein	NA	NA	NA	NA
WP_003595597.1\|2008779_2010834_-\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_013245947.1\|2010823_2013322_-	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_043925930.1\|2013413_2015636_+	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA
WP_013245949.1\|2015610_2016693_+\|integrase	site-specific integrase	Q9AZR0	Lactococcus_phage	6.6e-64	38.4
2027172:2027199	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2245685 : 2327424

Bacillus_phage(21.43%)

tRNA,bacteriocin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003659543.1\|2245685_2247092_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	5.7e-52	30.4
WP_013246002.1\|2247332_2248727_-	FAD-binding protein	NA	NA	NA	NA
WP_013246003.1\|2248852_2249440_-	hypothetical protein	NA	NA	NA	NA
WP_003567227.1\|2249439_2249631_-	hypothetical protein	NA	NA	NA	NA
WP_003576207.1\|2250106_2251600_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_013246004.1\|2251747_2252728_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_013246005.1\|2252843_2253515_-	ribose-5-phosphate isomerase A	NA	NA	NA	NA
WP_013246006.1\|2253698_2254529_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_013246007.1\|2254674_2255514_-\|protease	YhfC family intramembrane metalloprotease	NA	NA	NA	NA
WP_013246008.1\|2255526_2256543_-	membrane protein	NA	NA	NA	NA
WP_013246009.1\|2256549_2256924_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_013246010.1\|2257088_2258360_-	MucBP domain-containing protein	NA	NA	NA	NA
WP_003591638.1\|2258677_2259454_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_013246011.1\|2259471_2260359_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.9e-34	40.0
WP_013246013.1\|2261552_2262668_-	PIN/TRAM domain-containing protein	NA	NA	NA	NA
WP_003567254.1\|2262689_2264054_-	DNA repair protein RadA	NA	NA	NA	NA
WP_003567256.1\|2264070_2264613_-	dUTP diphosphatase	J9PV85	Bacillus_phage	8.1e-39	48.6
WP_003595964.1\|2264833_2265124_+	N-acetyltransferase	NA	NA	NA	NA
WP_003567260.1\|2265240_2265618_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_013246014.1\|2265862_2267182_+	C1 family peptidase	R4TV59	Phaeocystis_globosa_virus	2.4e-60	34.5
WP_003576225.1\|2267540_2268887_+	C1 family peptidase	A0A2H4UTL8	Bodo_saltans_virus	6.9e-47	29.8
WP_013246015.1\|2269114_2270215_+	ABC transporter	NA	NA	NA	NA
WP_016386658.1\|2270211_2271408_+	hypothetical protein	NA	NA	NA	NA
WP_003567269.1\|2271470_2272349_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-12	26.4
WP_013246017.1\|2272510_2274565_+	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	1.6e-63	33.3
WP_013246018.1\|2274721_2277352_-	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	1.1e-88	40.2
WP_020751524.1\|2277627_2278872_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.1e-11	22.6
WP_003576237.1\|2278983_2279607_-	CBS domain-containing protein	NA	NA	NA	NA
WP_013246019.1\|2280106_2280778_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_013246020.1\|2280875_2281115_-	hypothetical protein	NA	NA	NA	NA
WP_003599717.1\|2281289_2282411_+	low temperature requirement protein A	NA	NA	NA	NA
WP_003567280.1\|2282424_2282709_+	chromosome partitioning protein ParB	NA	NA	NA	NA
WP_003588738.1\|2282899_2284015_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_003567284.1\|2284202_2284409_-	CsbD family protein	NA	NA	NA	NA
WP_003567286.1\|2284541_2284799_-	hypothetical protein	NA	NA	NA	NA
WP_003567288.1\|2284869_2285076_-	hypothetical protein	NA	NA	NA	NA
WP_013246021.1\|2285300_2285552_-	hypothetical protein	NA	NA	NA	NA
WP_013246023.1\|2285879_2287112_+	MFS transporter	NA	NA	NA	NA
WP_003576247.1\|2287190_2288447_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	7.3e-99	56.8
WP_003588744.1\|2288535_2289369_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	9.6e-47	42.4
WP_003567298.1\|2289685_2289880_-	hypothetical protein	NA	NA	NA	NA
WP_013246024.1\|2290133_2290670_-	hypothetical protein	NA	NA	NA	NA
WP_013246025.1\|2290858_2292082_-	hypothetical protein	NA	NA	NA	NA
WP_013246026.1\|2292670_2293498_-	class C sortase	NA	NA	NA	NA
WP_013246027.1\|2293504_2295064_-	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA
WP_013245353.1\|2295482_2296403_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_013246030.1\|2297439_2300445_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003567312.1\|2300722_2301280_-	hypothetical protein	NA	NA	NA	NA
WP_013246031.1\|2301374_2302571_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_003605954.1\|2302779_2303835_+	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_013246032.1\|2304105_2304753_+	helix-turn-helix transcriptional regulator	A0A0S2MVM8	Bacillus_phage	1.7e-06	37.5
WP_003596042.1\|2304888_2305218_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_013246033.1\|2305214_2306003_+	hypothetical protein	NA	NA	NA	NA
WP_003567326.1\|2306055_2306844_+	hypothetical protein	NA	NA	NA	NA
WP_003567328.1\|2306888_2307167_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003580845.1\|2307190_2307475_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_013246034.1\|2307667_2307964_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_013246035.1\|2308068_2309424_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_013246036.1\|2309729_2310041_-	hypothetical protein	NA	NA	NA	NA
WP_013246037.1\|2310113_2310464_-	hypothetical protein	NA	NA	NA	NA
WP_013246038.1\|2310637_2312017_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_013246039.1\|2312027_2314220_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	1.1e-36	26.7
WP_013246040.1\|2314507_2314663_-	hypothetical protein	NA	NA	NA	NA
WP_013246041.1\|2314832_2316131_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_013246042.1\|2316135_2316942_+	response regulator transcription factor	NA	NA	NA	NA
WP_032800967.1\|2317243_2317666_-	hypothetical protein	NA	NA	NA	NA
WP_020751751.1\|2317842_2318025_-	hypothetical protein	NA	NA	NA	NA
WP_013246044.1\|2318332_2318512_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_016386691.1\|2319591_2319792_+	hypothetical protein	NA	NA	NA	NA
WP_032800966.1\|2320124_2320322_-	hypothetical protein	NA	NA	NA	NA
WP_032800965.1\|2320757_2321027_+	hypothetical protein	NA	NA	NA	NA
WP_013246049.1\|2321270_2321444_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_013246050.1\|2321482_2321656_-\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_013246051.1\|2321977_2322202_+	hypothetical protein	NA	NA	NA	NA
WP_032800964.1\|2322768_2323569_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_013246054.1\|2323852_2324011_-	hypothetical protein	NA	NA	NA	NA
WP_003567365.1\|2324126_2324459_-	hypothetical protein	NA	NA	NA	NA
WP_013246055.1\|2324709_2324901_-	hypothetical protein	NA	NA	NA	NA
WP_003576308.1\|2325213_2325549_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_013246056.1\|2325667_2326264_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_003659595.1\|2326534_2326843_-	hypothetical protein	NA	NA	NA	NA
WP_003567374.1\|2326978_2327194_-	hypothetical protein	NA	NA	NA	NA
WP_003567376.1\|2327190_2327424_-\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_011352

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_011352_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011352_1

458-535

Orphan

Consensus_repeat	Method
AAAGTCCGCATGACTTCGTTGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011352_1

>merge|NC_011352|1|458-535|CRISPRCasFinder
AAAGTCCGCATGACTTCGTTGAAACCCTTGCTACGAGCGGAATTTCGAAAATCGAAAGTCCGCATGACTTCGTTGACA

>NC_011352|1|1|458-535|CRISPRCasFinder
AAAGTCCGCATGACTTCGTTGAAA	CCCTTGCTACGAGCGGAATTTCGAAAATCG
AAAGTCCGCATGACTTCGTTGACA

Protein	Signature genes	Signature genes Name	Protein_function
NC_011352.1\|WP_012552805.1\|1891_2572_+\|zeta-toxin-family-protein	unknown	unknown	gnl\|CDD\|226648
NC_011352.1\|WP_012552804.1\|1381_1663_+\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	unknown	unknown	gnl\|CDD\|274102
NC_011352.1\|WP_012552809.1\|5838_6453_+\|hypothetical-protein	unknown	unknown	unknown
NC_011352.1\|WP_012552806.1\|2561_2840_-\|hypothetical-protein	unknown	unknown	unknown
NC_011352.1\|WP_012552810.1\|6454_6790_+\|CagC-family-type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|374896
NC_011352.1\|WP_012552807.1\|2862_3090_-\|hypothetical-protein	unknown	unknown	unknown
NC_011352.1\|WP_043925530.1\|3343_5407_+\|MobA/MobL-family-protein	unknown	unknown	gnl\|CDD\|367473
NC_011352.1\|WP_012552811.1\|7141_7801_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273346
NC_011352.1\|WP_003590770.1\|6810_7173_+\|conjugal-transfer-protein	unknown	unknown	gnl\|CDD\|274860
NC_011352.1\|WP_010620892.1\|1709_1895_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_011352.1\|WP_012552804.1\|1381_1663_+\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	3.66966e-12
NC_011352.1\|WP_012552805.1\|1891_2572_+\|zeta-toxin-family-protein	gnl\|CDD\|226648	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown].	3.80233e-38
NC_011352.1\|WP_012552810.1\|6454_6790_+\|CagC-family-type-IV-secretion-system-protein	gnl\|CDD\|374896	pfam16943, T4SS_CagC, Cag pathogenicity island, type IV secretory system. T4SS_CagC is a family of putative pathogenicity island, type IV, conjugal DNA-protein transfer, secretory system proteins from Gram-negative bacteria.	3.78304e-42
NC_011352.1\|WP_043925530.1\|3343_5407_+\|MobA/MobL-family-protein	gnl\|CDD\|367473	pfam03389, MobA_MobL, MobA/MobL family. This family includes of the MobA protein from the E. coli plasmid RSF1010, and the MobL protein from the Thiobacillus ferrooxidans plasmid PTF1. These sequences are mobilisation proteins, which are essential for specific plasmid transfer.	8.61991e-105
NC_011352.1\|WP_012552811.1\|7141_7801_+\|hypothetical-protein	gnl\|CDD\|273346	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family. Type IV secretion systems are found in Gram-negative pathogens. They export proteins, DNA, or complexes in different systems and are related to plasmid conjugation systems. This model represents related ATPases that include VirB4 in Agrobacterium tumefaciens (DNA export) CagE in Helicobacter pylori (protein export) and plasmid TraB (conjugation).	0.00181646
NC_011352.1\|WP_003590770.1\|6810_7173_+\|conjugal-transfer-protein	gnl\|CDD\|274860	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain. This model describes the C-terminal domain, or longer subunit, of the Firmicutes type VII secretion protein EssC. This protein (homologous to EccC in Actinobacteria) and the WXG100 target proteins are the only homologous parts of type VII secretion between Firmicutes and Actinobacteria. [Protein fate, Protein and peptide secretion and trafficking].	0.00221279

>NC_011352.1|WP_012552804.1|1381_1663_+|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin
MAVKEKKRVQVKIDKDLADNTEAVLNELGLNPTTAINMFYKRIVAEAALPFKPALSEAERANLGLLKATKGTPVTELKDAKGVSDWLNDPDED
>NC_011352.1|WP_010620892.1|1709_1895_+|hypothetical-protein
MKDTITINDFFEIAKETDLKDLLDKSLHEPDPEKRKVYDALYTYFLDKRQDEVIKRKDFVR
>NC_011352.1|WP_012552805.1|1891_2572_+|zeta-toxin-family-protein
MIDKPQYIIVAGINGAGKSTLYDTFPSLFDKTKRINADELLRQMGGDWHKDSDNLKAMKEEIKQLHYALDHQQSIHVETTLAGRGKAQLNLIDKAHKNGFEVALLYVALRDENLAIQRVNGRVQKGGHGVPVATIKKRYQQSKHNLPLVAFKSDKVMIYDNSEKFTFVYAREKGQVFKNDLRYFPWINQNITYPEKVQKQLQNNADQNPEVKPKNDPENKNDRPSY
>NC_011352.1|WP_012552806.1|2561_2840_-|hypothetical-protein
MPNQYEKLVKQQARLKQKIERENFKLRQSKYYENRQARKARSRRLIQKGALLEKYFQADNLSVEQTEELLKIFANYVNAHKPNKFKNDQPNN
>NC_011352.1|WP_012552807.1|2862_3090_-|hypothetical-protein
MIGGIVMSQSNLEKQEAKLKALNQKIKDEKNRIEQRLGKQIISQANLEYANLSNDQIKLLAQQFSEFLKEKSVDH
>NC_011352.1|WP_043925530.1|3343_5407_+|MobA/MobL-family-protein
MAIFHMSFSNISAGKGRSAIASAAYRSGKKLFDKKEGRSYFYARSVMPESFILTPKNAPEWASDREQLWNEVERKDRRANSRYAKEFNVALPVELSEDEQKELLTKYVQENFVDEGMVADVAIHRDHPDNPHAHVMLTNRPFNPDGTWGLKSKRENILDENGNKTYTGNSRFPRSRKVWLVDWDKKEKINQWRHNWAVSVNQVLEQKNIPDRISEKSFIEQGIDDTPMQHEGINSKRYERKEFNQQVKNYRKAKASYKNNQEKVINRGHLDSLSRHFSFNEKRVVKELSHELKTYISLESLDDKRRMLFNWKNSTLIKHAVGEDVTKQLLTINQQESSLKKADELLNKVVDRTTKKLYPELNFEQTTQAERRELIKETDSEQTIFKGSELNERLMNIRDDLLTQQLLTFTKRPYVGWKLLMQQEKEVKIELKYTLMIHDDNLESLEHVDQGLLEKYSPTEQQKITRAVKDLRAIMAVKQVIKTQYHEVLKRAFPKGDLNGLPLIKQEQAYTAVMYYDPVLKPCQAETIAQWQENPPRVFNTQEHLQGLAYLSGQLSLDQLENHHLQRVLKHDGTRQLFLGECKVDPTIKNSQIEKIQKQLKGQQAKDDQYRKANIGHYQPLNYRPVSPSYYLKTAFSNAIMTALYAHDEDYERQKQARSLKETEWEMTKKQRQHQTRNRHEDGGMHL
>NC_011352.1|WP_012552809.1|5838_6453_+|hypothetical-protein
MKVESWQGINGKLVHDEQKAIVVDNDQALTDQKQLQAILDQGGQPIDEVRRAMIKKTVKRQLKTPPLKLRGWFNRHQDSQSAKKAEKLVSDKPTHQYKQIKNEMTFFGESFLEGFLGFYGLEVDNALGRYEHNLHVLEVQELGQSEKEYYLATSENGRVKLATDPLPSQQIAEEQLNKFYQREPEETQAEQIQLRTSEDDGKEE
>NC_011352.1|WP_012552810.1|6454_6790_+|CagC-family-type-IV-secretion-system-protein
MKFSKVKALATTGATAIYLGLMNTQVVLAADGGEVQSKLTQAGKTIQGILTGLVVLVGICVALFIIIKRMPDADDPREKSEVYHAVGRVAGLVALAAAVIWLLPWVYSLFT
>NC_011352.1|WP_003590770.1|6810_7173_+|conjugal-transfer-protein
MKKGKEFIFPENVDKDYGIWKDYTLKDFGYAALAGLVGLIFIAIPPYGLILVLIKIVIVVLAMTIVMAILTIRPVAARKNIKVRDNFKLKRRYANSQKLFYLKPKKRGELNAFEEEQNRQ
>NC_011352.1|WP_012552811.1|7141_7801_+|hypothetical-protein
MRLKKSKTANKSVKLDWDYQPPKINGGKETIDDMSLVVGMYGNYEVTKTGNLVGILEVSGINLDLLNETEQQDVFEDYSAFLMSTLGEGVDDTLQFLEPTIPVNMTTYLNGLKRRYLTLQKDHPEQQFKIQLIASYLDHFTKVQESKNMTTKQHLLIVKVPIKDKSVKSLNLAVAHLDEKIEQVKRDIENALTDFDVTAKVLTSQEVQEILKNLINFNG

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NC_011352.1	548-577	0	1.0

1. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to position: 548-577, mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP037431	Lactobacillus plantarum strain EM plasmid pEM2, complete sequence	29923-29952	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP037431	Lactobacillus plantarum strain EM plasmid pEM2, complete sequence	45155-45184	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_KR052811	Lactobacillus crispatus strain L6 plasmid pLc17, complete sequence	11707-11736	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_KR052811	Lactobacillus crispatus strain L6 plasmid pLc17, complete sequence	11773-11802	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NC_021233	Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp1, complete sequence	33450-33479	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP053341	Lactobacillus paraplantarum strain CK401 plasmid pCK401D, complete sequence	38578-38607	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012287	Pediococcus damnosus strain TMW 2.1534 plasmid pL21534-4, complete sequence	30332-30361	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012287	Pediococcus damnosus strain TMW 2.1534 plasmid pL21534-4, complete sequence	30398-30427	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035175	Lactobacillus plantarum strain SRCM103426 plasmid unnamed1	188130-188159	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP021933	Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence	42507-42536	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012274	Pediococcus damnosus strain TMW 2.1532 plasmid pL21532-5, complete sequence	31540-31569	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012274	Pediococcus damnosus strain TMW 2.1532 plasmid pL21532-5, complete sequence	31606-31635	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012279	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence	3416-3445	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012279	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence	3470-3499	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012279	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence	3536-3565	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP045730	Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence	3508-3537	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP045730	Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence	3562-3591	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP045730	Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence	3628-3657	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014889	Lactobacillus backii strain TMW 1.1991 plasmid pL11991-8, complete sequence	6142-6171	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014889	Lactobacillus backii strain TMW 1.1991 plasmid pL11991-8, complete sequence	6208-6237	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014889	Lactobacillus backii strain TMW 1.1991 plasmid pL11991-8, complete sequence	6262-6291	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035028	Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence	2484-2513	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035028	Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence	47901-47930	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014631	Lactobacillus backii strain TMW 1.1988 plasmid L11988-7, complete sequence	24999-25028	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014631	Lactobacillus backii strain TMW 1.1988 plasmid L11988-7, complete sequence	25065-25094	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014631	Lactobacillus backii strain TMW 1.1988 plasmid L11988-7, complete sequence	25119-25148	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP046312	Lactobacillus crispatus strain FDAARGOS_743 plasmid unnamed1, complete sequence	3849-3878	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP046312	Lactobacillus crispatus strain FDAARGOS_743 plasmid unnamed1, complete sequence	3915-3944	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP026504	Lactobacillus crispatus strain AB70 plasmid pLcAB70, complete sequence	5475-5504	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP026504	Lactobacillus crispatus strain AB70 plasmid pLcAB70, complete sequence	5541-5570	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035023	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC	2484-2513	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035023	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC	47902-47931	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP046265	Lactobacillus plantarum strain KCCP11226 plasmid pKCCP11226_03, complete sequence	36555-36584	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP018212	Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_3, complete sequence	7356-7385	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP044413	Lactobacillus sp. JM1 plasmid unnamed1, complete sequence	16726-16755	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP044413	Lactobacillus sp. JM1 plasmid unnamed1, complete sequence	16792-16821	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP044414	Lactobacillus sp. JM1 plasmid unnamed2, complete sequence	25926-25955	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP044414	Lactobacillus sp. JM1 plasmid unnamed2, complete sequence	25980-26009	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP044414	Lactobacillus sp. JM1 plasmid unnamed2, complete sequence	26046-26075	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NC_011352	Lactobacillus paracasei plasmid plca36, complete sequence	482-511	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NC_011352	Lactobacillus paracasei plasmid plca36, complete sequence	548-577	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP015497	Lactobacillus helveticus strain FAM8105 plasmid pFAM8105, complete sequence	14027-14056	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP031183	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_A, complete sequence	782-811	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP031183	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_A, complete sequence	836-865	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP031183	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_A, complete sequence	902-931	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP008839	Lactobacillus gasseri DSM 14869 plasmid pEB01-1, complete sequence	37200-37229	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP008839	Lactobacillus gasseri DSM 14869 plasmid pEB01-1, complete sequence	37254-37283	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP008839	Lactobacillus gasseri DSM 14869 plasmid pEB01-1, complete sequence	37320-37349	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035145	Lactobacillus plantarum strain SRCM103357 plasmid unnamed2	46002-46031	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP029972	Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence	20601-20630	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP029972	Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence	20667-20696	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP029972	Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence	20721-20750	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP029972	Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence	20775-20804	0	1.0
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_KR052811	Lactobacillus crispatus strain L6 plasmid pLc17, complete sequence	11827-11856	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP046312	Lactobacillus crispatus strain FDAARGOS_743 plasmid unnamed1, complete sequence	3969-3998	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP026504	Lactobacillus crispatus strain AB70 plasmid pLcAB70, complete sequence	5421-5450	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP044413	Lactobacillus sp. JM1 plasmid unnamed1, complete sequence	16672-16701	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012296	Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence	29193-29222	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035558	Lactobacillus plantarum strain SRCM103297 plasmid unnamed2	30688-30717	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014929	Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-5, complete sequence	12727-12756	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035015	Lactobacillus plantarum strain 12_3 plasmid pldC, complete sequence	3239-3268	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035015	Lactobacillus plantarum strain 12_3 plasmid pldC, complete sequence	3293-3322	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035116	Lactobacillus plantarum strain SRCM103295 plasmid unnamed3	30608-30637	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035117	Lactobacillus plantarum strain SRCM103295 plasmid unnamed4	6324-6353	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035117	Lactobacillus plantarum strain SRCM103295 plasmid unnamed4	6378-6407	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032461	Lactobacillus plantarum strain ATG-K2 plasmid pK2-1, complete sequence	13196-13225	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032461	Lactobacillus plantarum strain ATG-K2 plasmid pK2-1, complete sequence	54810-54839	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP045037	Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence	42630-42659	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP018177	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence	60228-60257	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP018181	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence	14752-14781	1	0.967
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NC_011352	Lactobacillus paracasei plasmid plca36, complete sequence	428-457	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP015497	Lactobacillus helveticus strain FAM8105 plasmid pFAM8105, complete sequence	14081-14110	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035015	Lactobacillus plantarum strain 12_3 plasmid pldC, complete sequence	3173-3202	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035117	Lactobacillus plantarum strain SRCM103295 plasmid unnamed4	6444-6473	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014884	Lactobacillus backii strain TMW 1.1991 plasmid pL11991-3, complete sequence	67243-67272	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP018329	Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-5, complete sequence	18197-18226	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP023773	Lactobacillus plantarum strain PC520 plasmid p1, complete sequence	49678-49707	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP018179	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-3, complete sequence	37103-37132	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP025413	Lactobacillus plantarum strain X7021 plasmid unnamed1, complete sequence	15236-15265	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP018182	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-2, complete sequence	35957-35986	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014893	Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence	42325-42354	2	0.933
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP031177	Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_C, complete sequence	10893-10922	3	0.9
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP019032	Lactobacillus fermentum strain SNUV175 plasmid pSNU175-3, complete sequence	14426-14455	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP019032	Lactobacillus fermentum strain SNUV175 plasmid pSNU175-3, complete sequence	14480-14509	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP031177	Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_C, complete sequence	10773-10802	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP031177	Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_C, complete sequence	10827-10856	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP028233	Lactobacillus plantarum strain SRCM101222 plasmid unnamed4, complete sequence	15686-15715	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP028233	Lactobacillus plantarum strain SRCM101222 plasmid unnamed4, complete sequence	15740-15769	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP037430	Lactobacillus plantarum strain EM plasmid pEM1, complete sequence	34608-34637	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP037430	Lactobacillus plantarum strain EM plasmid pEM1, complete sequence	51551-51580	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014914	Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-2, complete sequence	8361-8390	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014914	Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-2, complete sequence	8415-8444	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014914	Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-2, complete sequence	8481-8510	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_KM063576	Lactobacillus reuteri strain LU4 plasmid pLU4, complete sequence	428-457	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_AP017932	Lactobacillus sakei strain LK-145 plasmid pLs145-a, complete sequence	19789-19818	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP025208	Lactobacillus sakei strain WiKim0074 plasmid pLSW74_2, complete sequence	42455-42484	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP022710	Lactobacillus sakei strain WiKim0063 plasmid pLBS01, complete sequence	58664-58693	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_KF559312	Lactobacillus sakei strain KCA311 plasmid pKCA54, complete sequence	47254-47283	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032634	Lactobacillus sakei strain ZFM220 plasmid unnamed1, complete sequence	41152-41181	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032634	Lactobacillus sakei strain ZFM220 plasmid unnamed1, complete sequence	41218-41247	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP035133	Lactobacillus plantarum strain SRCM103311 plasmid unnamed2	13068-13097	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032746	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed2, complete sequence	641-670	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032746	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed2, complete sequence	761-790	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP030883	Lactobacillus plantarum strain nF1 plasmid unnamed2, complete sequence	23143-23172	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP019031	Lactobacillus fermentum strain SNUV175 plasmid pSNU175-2, complete sequence	9290-9319	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP025137	Lactobacillus sakei strain WiKim0072 plasmid pLSW72_1, complete sequence	31957-31986	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP025137	Lactobacillus sakei strain WiKim0072 plasmid pLSW72_1, complete sequence	32023-32052	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014916	Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-1, complete sequence	821-850	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014916	Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-1, complete sequence	875-904	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014916	Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-1, complete sequence	941-970	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP046038	Lactobacillus sakei strain CBA3614 plasmid unnamed1, complete sequence	16608-16637	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP017412	Lactobacillus plantarum strain RI-113 plasmid pRI113_6, complete sequence	13039-13068	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP017412	Lactobacillus plantarum strain RI-113 plasmid pRI113_6, complete sequence	13159-13188	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_LT960785	Lactobacillus sakei isolate MFPB19 plasmid 2, complete sequence	3862-3891	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_LT960785	Lactobacillus sakei isolate MFPB19 plasmid 2, complete sequence	3928-3957	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_LT960789	Lactobacillus sakei strain MFPB16A1401 plasmid 2, complete sequence	3861-3890	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032636	Lactobacillus sakei strain ZFM225 plasmid unnamed1, complete sequence	45596-45625	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032636	Lactobacillus sakei strain ZFM225 plasmid unnamed1, complete sequence	45662-45691	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032641	Lactobacillus sakei strain ZFM229 plasmid unnamed1, complete sequence	12324-12353	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032641	Lactobacillus sakei strain ZFM229 plasmid unnamed1, complete sequence	12390-12419	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP015967	Lactobacillus plantarum strain LZ206 plasmid LZ206p2, complete sequence	13767-13796	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP015967	Lactobacillus plantarum strain LZ206 plasmid LZ206p2, complete sequence	13887-13916	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_LT960791	Lactobacillus sakei strain J54 plasmid 2, complete sequence	3861-3890	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_LT960791	Lactobacillus sakei strain J54 plasmid 2, complete sequence	3927-3956	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_LT960778	Lactobacillus sakei strain FLEC01 plasmid 2, complete sequence	3579-3608	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	CP031017	Lactobacillus helveticus isolate NWC_2_3 plasmid pNWC_2_3, complete sequence	6932-6961	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_LT960782	Lactobacillus sakei strain J64 plasmid 2, complete sequence	3579-3608	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_AP014682	Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence	428-457	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_AP014682	Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence	482-511	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_AP014682	Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence	548-577	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032653	Lactobacillus sakei strain LZ217 plasmid unnamed1, complete sequence	45618-45647	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032653	Lactobacillus sakei strain LZ217 plasmid unnamed1, complete sequence	45684-45713	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032650	Lactobacillus plantarum strain ZFM4 plasmid unnamed2, complete sequence	8181-8210	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP032650	Lactobacillus plantarum strain ZFM4 plasmid unnamed2, complete sequence	8301-8330	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP047123	Lactobacillus hilgardii strain FLUB plasmid unnamed2	428-457	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP047123	Lactobacillus hilgardii strain FLUB plasmid unnamed2	482-511	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP047123	Lactobacillus hilgardii strain FLUB plasmid unnamed2	548-577	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP031004	Lactobacillus curvatus strain TMW 1.1928 plasmid p-1.1928_1, complete sequence	53453-53482	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP046661	Lactobacillus plantarum strain 83-18 plasmid p83-18.1, complete sequence	22678-22707	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP046661	Lactobacillus plantarum strain 83-18 plasmid p83-18.1, complete sequence	22744-22773	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP046661	Lactobacillus plantarum strain 83-18 plasmid p83-18.1, complete sequence	22798-22827	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NC_021517	Lactobacillus plantarum 16 plasmid Lp16E, complete sequence	5081-5110	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NC_021517	Lactobacillus plantarum 16 plasmid Lp16E, complete sequence	5201-5230	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_LT907984	Lactobacillus sakei subsp. sakei 23K plasmid pJ23A1, complete sequence	3860-3889	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_LT907987	Lactobacillus sakei strain T332 plasmid p332A2, complete sequence	3580-3609	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP029967	Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed1, complete sequence	2143-2172	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP025283	Lactobacillus plantarum subsp. plantarum strain nF1-FD plasmid pnF1FD02, complete sequence	30348-30377	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP028225	Lactobacillus plantarum strain SRCM101105 plasmid unnamed3, complete sequence	7068-7097	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	AP018700	Lactobacillus curvatus NFH-Km12 plasmid NFH-Km12_plasmid1 DNA, complete genome	296-325	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NC_020820	Lactobacillus brevis KB290 plasmid pKB290-1, complete sequence	20055-20084	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NC_020820	Lactobacillus brevis KB290 plasmid pKB290-1, complete sequence	20175-20204	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014892	Lactobacillus backii strain TMW 1.1992 plasmid pL11992-2, complete sequence	6869-6898	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP014892	Lactobacillus backii strain TMW 1.1992 plasmid pL11992-2, complete sequence	6935-6964	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012290	Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-2, complete sequence	33618-33647	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012290	Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-2, complete sequence	33684-33713	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_CP012290	Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-2, complete sequence	33738-33767	4	0.867
NC_011352_1	1.1\|482\|30\|NC_011352\|CRISPRCasFinder	482-511	30	NZ_LR134468	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 26, complete sequence	108245-108274	7	0.767

1. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP037431 (Lactobacillus plantarum strain EM plasmid pEM2, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

2. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP037431 (Lactobacillus plantarum strain EM plasmid pEM2, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

3. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_KR052811 (Lactobacillus crispatus strain L6 plasmid pLc17, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

4. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_KR052811 (Lactobacillus crispatus strain L6 plasmid pLc17, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

5. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NC_021233 (Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

6. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP053341 (Lactobacillus paraplantarum strain CK401 plasmid pCK401D, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

7. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012287 (Pediococcus damnosus strain TMW 2.1534 plasmid pL21534-4, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

8. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012287 (Pediococcus damnosus strain TMW 2.1534 plasmid pL21534-4, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

9. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035175 (Lactobacillus plantarum strain SRCM103426 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

10. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP021933 (Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

11. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012274 (Pediococcus damnosus strain TMW 2.1532 plasmid pL21532-5, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

12. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012274 (Pediococcus damnosus strain TMW 2.1532 plasmid pL21532-5, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

13. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012279 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

14. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012279 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

15. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012279 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

16. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP045730 (Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

17. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP045730 (Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

18. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP045730 (Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

19. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014889 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-8, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

20. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014889 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-8, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

21. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014889 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-8, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

22. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035028 (Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

23. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035028 (Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

24. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014631 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-7, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

25. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014631 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-7, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

26. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014631 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-7, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

27. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP046312 (Lactobacillus crispatus strain FDAARGOS_743 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

28. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP046312 (Lactobacillus crispatus strain FDAARGOS_743 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

29. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP026504 (Lactobacillus crispatus strain AB70 plasmid pLcAB70, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

30. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP026504 (Lactobacillus crispatus strain AB70 plasmid pLcAB70, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

31. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035023 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

32. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035023 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

33. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP046265 (Lactobacillus plantarum strain KCCP11226 plasmid pKCCP11226_03, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

34. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP018212 (Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_3, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

35. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP044413 (Lactobacillus sp. JM1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

36. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP044413 (Lactobacillus sp. JM1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

37. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP044414 (Lactobacillus sp. JM1 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

38. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP044414 (Lactobacillus sp. JM1 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

39. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP044414 (Lactobacillus sp. JM1 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

40. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NC_011352 (Lactobacillus paracasei plasmid plca36, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

41. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NC_011352 (Lactobacillus paracasei plasmid plca36, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

42. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP015497 (Lactobacillus helveticus strain FAM8105 plasmid pFAM8105, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

43. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP031183 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_A, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

44. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP031183 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_A, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

45. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP031183 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_A, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

46. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP008839 (Lactobacillus gasseri DSM 14869 plasmid pEB01-1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

47. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP008839 (Lactobacillus gasseri DSM 14869 plasmid pEB01-1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

48. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP008839 (Lactobacillus gasseri DSM 14869 plasmid pEB01-1, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

49. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035145 (Lactobacillus plantarum strain SRCM103357 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

50. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP029972 (Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

51. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP029972 (Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

52. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP029972 (Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

53. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP029972 (Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcgaaaatcg	Protospacer
******************************

54. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_KR052811 (Lactobacillus crispatus strain L6 plasmid pLc17, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttactacgagcggaatttcgaaaatcg	Protospacer
*****.************************

55. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP046312 (Lactobacillus crispatus strain FDAARGOS_743 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttactacgagcggaatttcgaaaatcg	Protospacer
*****.************************

56. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP026504 (Lactobacillus crispatus strain AB70 plasmid pLcAB70, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttactacgagcggaatttcgaaaatcg	Protospacer
*****.************************

57. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP044413 (Lactobacillus sp. JM1 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacaagcggaatttcgaaaatcg	Protospacer
**********.*******************

58. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012296 (Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
tccttgctacgagcggaatttcgaaaatcg	Protospacer
.*****************************

59. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035558 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed2) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
tccttgctacgagcggaatttcgaaaatcg	Protospacer
.*****************************

60. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014929 (Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-5, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagtggaatttcgaaaatcg	Protospacer
*************.****************

61. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035015 (Lactobacillus plantarum strain 12_3 plasmid pldC, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcgggatttcgaaaatcg	Protospacer
****************.*************

62. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035015 (Lactobacillus plantarum strain 12_3 plasmid pldC, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcgggatttcgaaaatcg	Protospacer
****************.*************

63. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035116 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed3) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttcaaaaatcg	Protospacer
**********************.*******

64. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035117 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed4) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcgggatttcgaaaatcg	Protospacer
****************.*************

65. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035117 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed4) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcgggatttcgaaaatcg	Protospacer
****************.*************

66. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032461 (Lactobacillus plantarum strain ATG-K2 plasmid pK2-1, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttagaaaatcg	Protospacer
********************* ********

67. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032461 (Lactobacillus plantarum strain ATG-K2 plasmid pK2-1, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaatttagaaaatcg	Protospacer
********************* ********

68. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP045037 (Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcgaaatttcgaaaatcg	Protospacer
***************.**************

69. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP018177 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcgaaatttcgaaaatcg	Protospacer
***************.**************

70. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP018181 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence) position: , mismatch: 1, identity: 0.967

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcgaaatttcgaaaatcg	Protospacer
***************.**************

71. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NC_011352 (Lactobacillus paracasei plasmid plca36, complete sequence) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttactacgagcggaatttcgaaaatca	Protospacer
*****.***********************.

72. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP015497 (Lactobacillus helveticus strain FAM8105 plasmid pFAM8105, complete sequence) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaattttgaaaatca	Protospacer
*********************.*******.

73. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035015 (Lactobacillus plantarum strain 12_3 plasmid pldC, complete sequence) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctatgagcgggatttcgaaaatcg	Protospacer
*********.******.*************

74. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035117 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed4) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctatgagcgggatttcgaaaatcg	Protospacer
*********.******.*************

75. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014884 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-3, complete sequence) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagtggaatctcgaaaatcg	Protospacer
*************.*****.**********

76. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP018329 (Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-5, complete sequence) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgaatggaatttcgaaaatcg	Protospacer
************..****************

77. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP023773 (Lactobacillus plantarum strain PC520 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgatcggaatttagaaaatcg	Protospacer
************ ******** ********

78. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP018179 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-3, complete sequence) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgaatggaatttcgaaaatcg	Protospacer
************..****************

79. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP025413 (Lactobacillus plantarum strain X7021 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgaatggaatttcgaaaatcg	Protospacer
************..****************

80. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP018182 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-2, complete sequence) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgaatggaatttcgaaaatcg	Protospacer
************..****************

81. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014893 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence) position: , mismatch: 2, identity: 0.933

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagtggaatctcgaaaatcg	Protospacer
*************.*****.**********

82. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP031177 (Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_C, complete sequence) position: , mismatch: 3, identity: 0.9

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaattg	Protospacer
****************** ***.*****.*

83. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP019032 (Lactobacillus fermentum strain SNUV175 plasmid pSNU175-3, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttggtacgagcggaattccgaaaaaca	Protospacer
****** *************.****** *.

84. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP019032 (Lactobacillus fermentum strain SNUV175 plasmid pSNU175-3, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttggtacgagcggaattccgaaaaaca	Protospacer
****** *************.****** *.

85. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP031177 (Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_C, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

86. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP031177 (Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_C, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

87. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP028233 (Lactobacillus plantarum strain SRCM101222 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttggtacgagcggaattccgaaaaaca	Protospacer
****** *************.****** *.

88. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP028233 (Lactobacillus plantarum strain SRCM101222 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttggtacgagcggaattccgaaaaaca	Protospacer
****** *************.****** *.

89. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP037430 (Lactobacillus plantarum strain EM plasmid pEM1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

90. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP037430 (Lactobacillus plantarum strain EM plasmid pEM1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

91. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014914 (Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

92. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014914 (Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

93. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014914 (Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

94. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_KM063576 (Lactobacillus reuteri strain LU4 plasmid pLU4, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

95. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_AP017932 (Lactobacillus sakei strain LK-145 plasmid pLs145-a, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

96. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP025208 (Lactobacillus sakei strain WiKim0074 plasmid pLSW74_2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

97. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP022710 (Lactobacillus sakei strain WiKim0063 plasmid pLBS01, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

98. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_KF559312 (Lactobacillus sakei strain KCA311 plasmid pKCA54, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

99. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032634 (Lactobacillus sakei strain ZFM220 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

100. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032634 (Lactobacillus sakei strain ZFM220 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

101. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP035133 (Lactobacillus plantarum strain SRCM103311 plasmid unnamed2) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

102. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032746 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

103. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032746 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

104. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP030883 (Lactobacillus plantarum strain nF1 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

105. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP019031 (Lactobacillus fermentum strain SNUV175 plasmid pSNU175-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

106. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP025137 (Lactobacillus sakei strain WiKim0072 plasmid pLSW72_1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

107. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP025137 (Lactobacillus sakei strain WiKim0072 plasmid pLSW72_1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

108. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014916 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

109. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014916 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

110. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014916 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

111. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP046038 (Lactobacillus sakei strain CBA3614 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

112. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP017412 (Lactobacillus plantarum strain RI-113 plasmid pRI113_6, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

113. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP017412 (Lactobacillus plantarum strain RI-113 plasmid pRI113_6, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

114. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_LT960785 (Lactobacillus sakei isolate MFPB19 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

115. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_LT960785 (Lactobacillus sakei isolate MFPB19 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

116. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_LT960789 (Lactobacillus sakei strain MFPB16A1401 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

117. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032636 (Lactobacillus sakei strain ZFM225 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

118. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032636 (Lactobacillus sakei strain ZFM225 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

119. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032641 (Lactobacillus sakei strain ZFM229 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

120. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032641 (Lactobacillus sakei strain ZFM229 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

121. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP015967 (Lactobacillus plantarum strain LZ206 plasmid LZ206p2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

122. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP015967 (Lactobacillus plantarum strain LZ206 plasmid LZ206p2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

123. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_LT960791 (Lactobacillus sakei strain J54 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

124. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_LT960791 (Lactobacillus sakei strain J54 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

125. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_LT960778 (Lactobacillus sakei strain FLEC01 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

126. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to CP031017 (Lactobacillus helveticus isolate NWC_2_3 plasmid pNWC_2_3, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

127. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_LT960782 (Lactobacillus sakei strain J64 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

128. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_AP014682 (Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

129. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_AP014682 (Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

130. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_AP014682 (Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

131. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032653 (Lactobacillus sakei strain LZ217 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

132. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032653 (Lactobacillus sakei strain LZ217 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

133. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032650 (Lactobacillus plantarum strain ZFM4 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

134. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP032650 (Lactobacillus plantarum strain ZFM4 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

135. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP047123 (Lactobacillus hilgardii strain FLUB plasmid unnamed2) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

136. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP047123 (Lactobacillus hilgardii strain FLUB plasmid unnamed2) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

137. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP047123 (Lactobacillus hilgardii strain FLUB plasmid unnamed2) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

138. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP031004 (Lactobacillus curvatus strain TMW 1.1928 plasmid p-1.1928_1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

139. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP046661 (Lactobacillus plantarum strain 83-18 plasmid p83-18.1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

140. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP046661 (Lactobacillus plantarum strain 83-18 plasmid p83-18.1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

141. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP046661 (Lactobacillus plantarum strain 83-18 plasmid p83-18.1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

142. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NC_021517 (Lactobacillus plantarum 16 plasmid Lp16E, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

143. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NC_021517 (Lactobacillus plantarum 16 plasmid Lp16E, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

144. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_LT907984 (Lactobacillus sakei subsp. sakei 23K plasmid pJ23A1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

145. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_LT907987 (Lactobacillus sakei strain T332 plasmid p332A2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

146. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP029967 (Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

147. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP025283 (Lactobacillus plantarum subsp. plantarum strain nF1-FD plasmid pnF1FD02, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

148. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP028225 (Lactobacillus plantarum strain SRCM101105 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

149. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to AP018700 (Lactobacillus curvatus NFH-Km12 plasmid NFH-Km12_plasmid1 DNA, complete genome) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

150. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NC_020820 (Lactobacillus brevis KB290 plasmid pKB290-1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

151. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NC_020820 (Lactobacillus brevis KB290 plasmid pKB290-1, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

152. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014892 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

153. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP014892 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

154. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012290 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

155. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012290 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

156. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_CP012290 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-2, complete sequence) position: , mismatch: 4, identity: 0.867

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
cccttgctacgagcggaagttcaaaaaatg	Protospacer
****************** ***.**** .*

157. spacer 1.1|482|30|NC_011352|CRISPRCasFinder matches to NZ_LR134468 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 26, complete sequence) position: , mismatch: 7, identity: 0.767

cccttgctacgagcggaatttcgaaaatcg	CRISPR spacer
ccctggctacgagcggcatttcgtctcgcg	Protospacer
**** *********** ******     **

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014334

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_011352

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection