CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NC_010508	Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence	0 crisprs	WYL,cas3,RT,DEDDh,csa3,DinG	4
NC_010512	Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence	0 crisprs	Cas14u_CAS-V,RT,WYL	1
NC_010515	Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence	0 crisprs	cas3,csa3,RT,Cas14u_CAS-V,DinG	4

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

198559 : 236943

Burkholderia_phage(87.23%)

tail,terminase,capsid,head,integrase,portal,holin,plate

attL 198439:198484|attR 237265:237310

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
198439:198484	attL	NA	NA	NA	NA
WP_012327641.1\|198559_199669_-\|integrase	site-specific integrase	A0A1S5NNJ1	Burkholderia_phage	1.1e-146	73.0
WP_155626534.1\|199536_199971_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012327642.1\|200558_203351_-	zinc finger CHC2-family protein	A0A1S5NPU9	Burkholderia_phage	0.0e+00	97.0
WP_012327643.1\|203353_203608_-	hypothetical protein	A0A1S5NPT7	Burkholderia_phage	7.4e-35	97.6
WP_012327644.1\|203604_203967_-	hypothetical protein	E5E3T4	Burkholderia_phage	2.1e-51	84.2
WP_012327645.1\|203969_204125_-	hypothetical protein	NA	NA	NA	NA
WP_012327646.1\|204129_204324_-	hypothetical protein	E5E3T5	Burkholderia_phage	3.6e-21	87.5
WP_012327647.1\|204367_204562_-	hypothetical protein	A0A1S5NRN5	Burkholderia_phage	4.2e-30	93.8
WP_012327648.1\|204566_204761_-	hypothetical protein	A0A1S5NR87	Burkholderia_phage	9.0e-25	92.2
WP_006757081.1\|204849_205098_-	ogr/Delta-like zinc finger family protein	A0A1S5NNI9	Burkholderia_phage	2.6e-40	97.6
WP_012327649.1\|205125_205314_-	hypothetical protein	A4PE59	Ralstonia_virus	1.2e-10	64.9
WP_012327650.1\|205342_205534_-	hypothetical protein	E5E3U0	Burkholderia_phage	1.0e-12	67.3
WP_041492044.1\|205550_205736_-	hypothetical protein	A4JWR7	Burkholderia_virus	4.4e-05	54.0
WP_012327652.1\|205903_206353_+	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	3.7e-13	48.2
WP_012327653.1\|206343_206724_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_041491939.1\|206897_207188_+	hypothetical protein	NA	NA	NA	NA
WP_012327654.1\|207190_208342_-	phage late control D family protein	A0A1S5NV58	Burkholderia_phage	3.6e-193	96.8
WP_012327655.1\|208338_208767_-\|tail	phage tail protein	A0A1S5NTH4	Burkholderia_phage	8.3e-71	94.4
WP_012327656.1\|208780_211540_-	membrane protein	E5E3P9	Burkholderia_phage	0.0e+00	88.3
WP_012327657.1\|211536_211656_-\|tail	GpE family phage tail protein	A0A1S5NR79	Burkholderia_phage	3.0e-15	97.4
WP_012327658.1\|211655_211967_-\|tail	phage tail assembly protein	A0A1S5NNH9	Burkholderia_phage	3.9e-46	96.1
WP_012327659.1\|211999_212509_-\|tail	phage major tail tube protein	A0A1S5NNH7	Burkholderia_phage	9.5e-90	96.4
WP_012327660.1\|212538_213711_-\|tail	phage tail sheath protein	A0A1S5NNH8	Burkholderia_phage	1.1e-218	94.6
WP_012327661.1\|213822_214572_-	site-specific DNA-methyltransferase	A0A1S5NPU0	Burkholderia_phage	4.7e-138	94.8
WP_012327662.1\|214549_214732_-	Com family DNA-binding transcriptional regulator	A0A1S5NPS9	Burkholderia_phage	2.9e-25	90.0
WP_012327663.1\|214881_215220_-	hypothetical protein	A0A1S5NQ35	Burkholderia_phage	4.4e-27	59.8
WP_157062182.1\|215286_215697_-	hypothetical protein	R4JMH4	Burkholderia_phage	1.3e-57	77.8
WP_012327665.1\|215711_217421_-	hypothetical protein	A0A1S5NTG6	Burkholderia_phage	4.7e-40	51.9
WP_012327666.1\|217426_217978_-\|tail	phage tail protein I	A0A1S5NRL9	Burkholderia_phage	3.0e-97	95.6
WP_012327667.1\|217970_218876_-\|plate	baseplate assembly protein	A0A1S5NR72	Burkholderia_phage	1.2e-156	95.0
WP_012327668.1\|218872_219238_-	hypothetical protein	A0A1S5NNH3	Burkholderia_phage	1.3e-56	91.7
WP_012327669.1\|219234_219939_-\|plate	phage baseplate assembly protein V	A0A1S5NNH1	Burkholderia_phage	7.0e-99	84.2
WP_012327670.1\|220218_221988_-	hypothetical protein	NA	NA	NA	NA
WP_012327671.1\|222206_222656_-	phage virion morphogenesis protein	A0A1S5NPT5	Burkholderia_phage	4.0e-68	91.9
WP_012327672.1\|222655_223066_-\|tail	phage tail protein	A0A1S5NPS3	Burkholderia_phage	2.3e-70	96.3
WP_012327673.1\|223062_223554_-	hypothetical protein	A0A1S5NQ26	Burkholderia_phage	3.0e-64	83.4
WP_012327674.1\|223550_224351_-	DUF3380 domain-containing protein	A0A1S5NV50	Burkholderia_phage	1.3e-138	94.7
WP_012327675.1\|224343_224664_-\|holin	phage holin family protein	A0A1S5NTF8	Burkholderia_phage	1.3e-47	91.5
WP_012327676.1\|224663_225038_-	membrane protein	A0A1S5NRL1	Burkholderia_phage	7.8e-57	100.0
WP_012327677.1\|225040_225253_-\|tail	tail protein	A0A1S5NR68	Burkholderia_phage	7.6e-33	95.7
WP_012327678.1\|225252_225735_-\|head	head completion/stabilization protein	A0A1S5NNA6	Burkholderia_phage	2.1e-78	90.0
WP_012327679.1\|225839_226526_-\|terminase	terminase endonuclease subunit	A0A1S5NNA5	Burkholderia_phage	1.0e-118	95.6
WP_012327680.1\|226522_227542_-\|capsid	phage major capsid protein, P2 family	A0A1S5NPT2	Burkholderia_phage	9.2e-177	90.9
WP_012327681.1\|227578_228397_-\|capsid	GPO family capsid scaffolding protein	A0A1S5NPS0	Burkholderia_phage	7.0e-127	86.4
WP_012327682.1\|228541_230293_+	oxidoreductase	E5E3S6	Burkholderia_phage	0.0e+00	89.5
WP_012327683.1\|230292_231345_+\|portal	phage portal protein	A0A1S5NV43	Burkholderia_phage	5.4e-196	95.1
WP_012327684.1\|231372_232089_-	DUF159 family protein	A0A1S5NTJ1	Burkholderia_phage	7.3e-128	89.1
WP_155626532.1\|232185_232467_+	hypothetical protein	A0A1S5NRP7	Burkholderia_phage	6.1e-46	90.3
WP_157062158.1\|232469_232628_+	hypothetical protein	NA	NA	NA	NA
WP_012327686.1\|233063_234179_-	DUF3396 domain-containing protein	E5E3X7	Burkholderia_phage	2.2e-131	60.5
WP_012327687.1\|234184_234955_-	nuclease	A4JWV4	Burkholderia_virus	1.6e-48	46.7
WP_012327688.1\|234951_235488_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	2.2e-60	65.1
WP_012327689.1\|235881_236943_-	RelA/SpoT domain-containing protein	A0A1B0VBT5	Salmonella_phage	2.9e-32	32.9
237265:237310	attR	NA	NA	NA	NA

DBSCAN-SWA_2

458507 : 489081

uncultured_Caudovirales_phage(60.0%)

integrase,protease,plate

attL 459079:459124|attR 464592:464637

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012327784.1\|458507_459029_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	3.7e-20	48.7
459079:459124	attL	NA	NA	NA	NA
WP_012327785.1\|459266_460361_+	hypothetical protein	NA	NA	NA	NA
WP_012327786.1\|460362_460782_+	hypothetical protein	NA	NA	NA	NA
WP_157062159.1\|460774_461467_+	hypothetical protein	NA	NA	NA	NA
WP_080001050.1\|461526_462069_-\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	1.7e-49	60.4
WP_012327788.1\|462501_463572_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_080001092.1\|463578_464349_-	hypothetical protein	NA	NA	NA	NA
WP_006477106.1\|464961_465165_+	hypothetical protein	NA	NA	NA	NA
464592:464637	attR	NA	NA	NA	NA
WP_006477105.1\|465274_466075_-	cystine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012327790.1\|466431_469623_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	7.9e-57	26.5
WP_012327791.1\|469674_474258_+	RHS repeat protein	A0A2H4JFP5	uncultured_Caudovirales_phage	3.9e-49	52.3
WP_105797738.1\|474253_474478_+	hypothetical protein	NA	NA	NA	NA
WP_157062183.1\|474773_476498_+	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	6.2e-48	50.8
WP_034174269.1\|476500_476830_+	hypothetical protein	NA	NA	NA	NA
WP_157062160.1\|477275_477485_+	hypothetical protein	NA	NA	NA	NA
WP_034174268.1\|477556_477916_+	hypothetical protein	NA	NA	NA	NA
WP_006477100.1\|478661_478979_+	hypothetical protein	NA	NA	NA	NA
WP_012327796.1\|479067_479850_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_006477098.1\|479846_481193_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_006477097.1\|481295_481907_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_011546581.1\|482279_482915_+	hypothetical protein	NA	NA	NA	NA
WP_006484395.1\|482961_483477_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_006477094.1\|483492_484983_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_006477093.1\|485053_485557_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_006477092.1\|485619_486105_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_006477091.1\|486181_488017_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_006477090.1\|487980_489081_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_3

795212 : 808309

Hokovirus(12.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006476838.1\|795212_797165_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	1.6e-148	49.8
WP_006476837.1\|797421_798558_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	5.0e-22	26.9
WP_012327942.1\|798562_800470_+	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	1.3e-59	37.9
WP_006476834.1\|800598_801414_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	6.7e-37	33.7
WP_012327943.1\|801455_802142_-	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	1.2e-07	26.4
WP_006476832.1\|802138_802681_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_012327944.1\|802716_804273_-	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	1.2e-23	30.8
WP_006476830.1\|804278_804956_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_011544645.1\|804967_805753_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
WP_006476828.1\|805955_807011_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.2e-72	45.9
WP_012327946.1\|807109_808309_-	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	A0A2H4UVM2	Bodo_saltans_virus	5.9e-05	24.3

DBSCAN-SWA_4

1406184 : 1416592

Pseudomonas_phage(33.33%)

protease,tail,capsid,terminase,head,integrase,portal

attL 1405878:1405924|attR 1416674:1416720

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1405878:1405924	attL	NA	NA	NA	NA
WP_157062167.1\|1406184_1407375_+\|integrase	tyrosine-type recombinase/integrase	Q9T1P3	Pseudomonas_phage	1.8e-30	30.9
WP_012328242.1\|1407367_1407874_+	hypothetical protein	NA	NA	NA	NA
WP_041491958.1\|1407973_1408162_+	hypothetical protein	NA	NA	NA	NA
WP_157062168.1\|1408170_1408398_+	hypothetical protein	NA	NA	NA	NA
WP_157062169.1\|1408670_1408889_+	hypothetical protein	NA	NA	NA	NA
WP_041491960.1\|1408881_1409124_+	hypothetical protein	NA	NA	NA	NA
WP_012328243.1\|1409120_1410299_+	AAA family ATPase	NA	NA	NA	NA
WP_012328244.1\|1410532_1411783_+\|capsid	phage major capsid protein	A0A0K1Y730	Rhodobacter_phage	3.3e-35	30.3
WP_012328245.1\|1411799_1412333_+\|head,protease	HK97 family phage prohead protease	B4UTP2	Rhizobium_phage	1.8e-30	50.0
WP_012328246.1\|1412329_1413484_+\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	1.1e-69	39.4
WP_012328247.1\|1413668_1413968_+	HNH endonuclease	A0A2H4PHY5	Pseudomonas_phage	6.5e-06	37.2
WP_012328248.1\|1414046_1414445_+\|terminase	P27 family phage terminase small subunit	A0A1X9I6K0	Streptococcus_phage	2.5e-13	45.3
WP_012328249.1\|1414416_1415982_+\|terminase	terminase large subunit	E4ZFM0	Streptococcus_phage	2.1e-132	49.0
WP_012328250.1\|1415993_1416278_+\|head,tail	phage gp6-like head-tail connector protein	A0A0U4JEH2	Pseudomonas_phage	1.1e-05	36.7
WP_012328251.1\|1416274_1416592_+\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	1.3e-12	40.8
1416674:1416720	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_010512

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

244649 : 251023

Escherichia_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012336775.1\|244649_245435_+	ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	1.4e-10	26.7
WP_011549810.1\|245431_246151_+	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	2.8e-18	28.4
WP_012336776.1\|246147_247545_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	9.8e-28	30.0
WP_012336777.1\|247654_248551_+	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	2.9e-97	58.2
WP_012336778.1\|248547_249129_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.5e-48	53.9
WP_012336779.1\|249125_250010_+	dTDP-4-dehydrorhamnose reductase	K7QJU0	Escherichia_phage	8.1e-28	34.3
WP_012336780.1\|250006_251023_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.4e-79	45.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NC_010515

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1139448 : 1212078

Staphylococcus_phage(28.57%)

integrase,transposase

attL 1133069:1133084|attR 1160545:1160560

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1133069:1133084	attL	NA	NA	NA	NA
WP_006479931.1\|1139448_1139757_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_108725706.1\|1139753_1140404_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_080001168.1\|1140306_1141683_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.9e-38	31.7
WP_006479934.1\|1141840_1142041_+\|transposase	transposase	NA	NA	NA	NA
WP_012338863.1\|1143096_1143801_+	isochorismatase family protein	NA	NA	NA	NA
WP_012338864.1\|1143876_1144785_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_006479937.1\|1145315_1146125_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_006479938.1\|1146190_1147042_+	ion transporter	NA	NA	NA	NA
WP_012338865.1\|1147268_1147931_-	NAAT family transporter	NA	NA	NA	NA
WP_012338866.1\|1148178_1148901_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	7.9e-98	74.7
WP_012338867.1\|1148897_1149995_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_006479942.1\|1150057_1150552_-	arsenate reductase ArsC	NA	NA	NA	NA
WP_006479943.1\|1150574_1150922_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012338868.1\|1151020_1152037_-	hypothetical protein	NA	NA	NA	NA
WP_012338869.1\|1152212_1152929_-	porin family protein	NA	NA	NA	NA
WP_012338870.1\|1153047_1153686_-	response regulator transcription factor	NA	NA	NA	NA
WP_034175329.1\|1153682_1155116_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_105797735.1\|1155447_1156338_+	response regulator transcription factor	NA	NA	NA	NA
WP_012338873.1\|1156441_1159450_+	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	7.7e-46	34.0
WP_012338874.1\|1159653_1164495_+	adhesin	NA	NA	NA	NA
1160545:1160560	attR	NA	NA	NA	NA
WP_012338875.1\|1164715_1165411_+	response regulator transcription factor	NA	NA	NA	NA
WP_012338876.1\|1165488_1166214_-	response regulator transcription factor	NA	NA	NA	NA
WP_012338877.1\|1166527_1167232_-	OmpA family protein	NA	NA	NA	NA
WP_012338878.1\|1167336_1177404_-	adhesin	NA	NA	NA	NA
WP_006479953.1\|1177436_1180472_+	sensor histidine kinase	A0A1V0SGX0	Hokovirus	1.6e-35	29.8
WP_012338879.1\|1180791_1181562_-	glycosyltransferase family 25 protein	NA	NA	NA	NA
WP_012338880.1\|1181558_1181876_-	hypothetical protein	NA	NA	NA	NA
WP_006479955.1\|1182339_1183950_+	glycosyltransferase family protein	NA	NA	NA	NA
WP_012338881.1\|1183963_1184815_+	hypothetical protein	NA	NA	NA	NA
WP_006479956.1\|1185030_1185438_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_012338882.1\|1185639_1186476_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_034175331.1\|1187232_1188000_+	carbonic anhydrase family protein	NA	NA	NA	NA
WP_085966486.1\|1188197_1189306_-\|transposase	IS3-like element ISBcen22 family transposase	S5WIU1	Leptospira_phage	1.5e-42	37.5
WP_085966505.1\|1189423_1190920_-	catalase	A0A2K9L0T1	Tupanvirus	7.8e-108	41.7
WP_006479962.1\|1191240_1192896_+	APC family permease	NA	NA	NA	NA
WP_012338884.1\|1193381_1194770_+	undecaprenyl-phosphate glucose phosphotransferase	NA	NA	NA	NA
WP_006479964.1\|1194899_1196153_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012338885.1\|1196149_1196656_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_012338886.1\|1196652_1198926_+	tyrosine protein kinase	NA	NA	NA	NA
WP_012338887.1\|1198922_1200146_+	glycosyltransferase	NA	NA	NA	NA
WP_012338888.1\|1200142_1201306_+	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
WP_012338889.1\|1201302_1202586_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_012338890.1\|1202575_1203658_+	hypothetical protein	NA	NA	NA	NA
WP_105797718.1\|1203640_1204753_-	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_006479972.1\|1205257_1206514_-	membrane protein	NA	NA	NA	NA
WP_006479973.1\|1206828_1208541_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_080001168.1\|1210701_1212078_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.9e-38	31.7

DBSCAN-SWA_2

1398295 : 1443868

Staphylococcus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080001108.1\|1398295_1399672_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	4.6e-38	31.7
WP_012339014.1\|1399773_1400769_+	hypothetical protein	NA	NA	NA	NA
WP_006480095.1\|1401014_1402301_-	MFS transporter	NA	NA	NA	NA
WP_034175348.1\|1402456_1403602_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA
WP_012339015.1\|1403953_1404826_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_012339016.1\|1404970_1405741_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	1.2e-08	27.2
WP_012339017.1\|1405886_1406441_-	OsmC family protein	NA	NA	NA	NA
WP_006480100.1\|1406684_1407248_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_012339018.1\|1407374_1407716_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_006480102.1\|1407785_1408466_+	DsbA family oxidoreductase	NA	NA	NA	NA
WP_006480103.1\|1408620_1409730_+	alkene reductase	NA	NA	NA	NA
WP_012339019.1\|1410110_1411319_+	putative C-S lyase	NA	NA	NA	NA
WP_006480105.1\|1411376_1411595_+	4-oxalocrotonate tautomerase family protein	NA	NA	NA	NA
WP_080001127.1\|1411977_1412349_-	hypothetical protein	NA	NA	NA	NA
WP_085966488.1\|1412492_1413729_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	8.6e-161	98.2
WP_006480106.1\|1413848_1415387_+\|transposase	IS3-like element ISBmu11 family transposase	A0A1B1P773	Bacillus_phage	3.7e-44	35.2
WP_157062193.1\|1415438_1415714_-	hypothetical protein	NA	NA	NA	NA
WP_006480107.1\|1416251_1417151_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_006480108.1\|1417250_1418186_+	DMT family transporter	NA	NA	NA	NA
WP_006480109.1\|1418353_1419448_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_006480110.1\|1419936_1420938_+	hypothetical protein	NA	NA	NA	NA
WP_080001128.1\|1421323_1422805_-	AraC family transcriptional regulator	A0A291LAM3	Bordetella_phage	1.0e-06	33.7
WP_006480111.1\|1423034_1423886_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_006480112.1\|1424112_1425363_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	6.9e-41	41.7
WP_012339027.1\|1426583_1428458_-	hypothetical protein	NA	NA	NA	NA
WP_006480114.1\|1430462_1431224_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_006480115.1\|1431220_1432342_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_006480116.1\|1432828_1434169_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_006480117.1\|1434185_1434602_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_012339030.1\|1434645_1436019_-	membrane protein	NA	NA	NA	NA
WP_108725702.1\|1436118_1437015_-	DUF4105 domain-containing protein	NA	NA	NA	NA
WP_012339032.1\|1436939_1437356_-	hypothetical protein	NA	NA	NA	NA
WP_080001172.1\|1438235_1438421_-	hypothetical protein	NA	NA	NA	NA
WP_080001129.1\|1439088_1439625_-\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	4.2e-19	51.5
WP_012339033.1\|1439515_1440034_-	hypothetical protein	NA	NA	NA	NA
WP_080001130.1\|1440037_1441978_-	S8 family serine peptidase	NA	NA	NA	NA
WP_080001108.1\|1442491_1443868_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	4.6e-38	31.7

DBSCAN-SWA_3

2126982 : 2189445

Pseudomonas_phage(22.22%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085962331.1\|2126982_2128216_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	2.4e-102	65.5
WP_012339446.1\|2130205_2131144_+	AAA family ATPase	NA	NA	NA	NA
WP_011546975.1\|2132271_2133057_+	TniQ family protein	NA	NA	NA	NA
WP_011546976.1\|2133169_2133472_-	H-NS histone family protein	NA	NA	NA	NA
WP_011546977.1\|2133782_2135669_+	NTPase KAP	NA	NA	NA	NA
WP_011546978.1\|2135668_2136490_+	hypothetical protein	NA	NA	NA	NA
WP_085966488.1\|2136652_2137890_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	8.6e-161	98.2
WP_011546980.1\|2139094_2139829_+	TatD family hydrolase	NA	NA	NA	NA
WP_011546981.1\|2139920_2140733_+	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	8.8e-05	25.5
WP_011546982.1\|2141342_2142293_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_011546983.1\|2142374_2143190_+	alpha/beta hydrolase	A0A1L7N183	Ralstonia_phage	1.6e-09	29.3
WP_011546984.1\|2143379_2144138_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.4e-07	28.8
WP_011694847.1\|2144199_2145399_+	MFS transporter	NA	NA	NA	NA
WP_012339451.1\|2145518_2146058_+	alkylhydroperoxidase	NA	NA	NA	NA
WP_011546988.1\|2146640_2147579_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012339454.1\|2148080_2148605_+\|transposase	transposase	NA	NA	NA	NA
WP_011546990.1\|2149004_2149724_+	hypothetical protein	NA	NA	NA	NA
WP_011546991.1\|2150169_2152356_+	catalase/peroxidase HPI	NA	NA	NA	NA
WP_011546992.1\|2152458_2153292_+	alpha/beta hydrolase	A0A0B5A484	Mycobacterium_phage	6.5e-11	26.8
WP_011546993.1\|2153494_2154589_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011546994.1\|2154912_2156601_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_011546995.1\|2157211_2157667_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_011546996.1\|2157668_2159903_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_011546997.1\|2159918_2161217_+	cytochrome c	NA	NA	NA	NA
WP_011546998.1\|2161890_2162325_-	hypothetical protein	NA	NA	NA	NA
WP_011546999.1\|2162597_2162969_+	BON domain-containing protein	NA	NA	NA	NA
WP_012339455.1\|2163553_2164585_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012339456.1\|2164845_2165220_+	response regulator	NA	NA	NA	NA
WP_011547002.1\|2165259_2167158_+	PAS domain-containing sensor histidine kinase	A0A1V0SGX0	Hokovirus	4.2e-05	32.5
WP_011547003.1\|2167150_2167795_+	response regulator transcription factor	NA	NA	NA	NA
WP_011547004.1\|2167946_2169272_-	MFS transporter	NA	NA	NA	NA
WP_011694841.1\|2170382_2171747_+	mercuric reductase	NA	NA	NA	NA
WP_085962331.1\|2172441_2173676_-\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	2.4e-102	65.5
WP_011547007.1\|2173976_2174603_-	hypothetical protein	NA	NA	NA	NA
WP_011547008.1\|2174651_2175539_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_011547009.1\|2175531_2175855_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011547010.1\|2176068_2176374_+	DUF3892 domain-containing protein	NA	NA	NA	NA
WP_077179465.1\|2176403_2176610_+	DUF2188 domain-containing protein	NA	NA	NA	NA
WP_006480563.1\|2176922_2177141_-	hypothetical protein	NA	NA	NA	NA
WP_012339459.1\|2177374_2178025_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_011547011.1\|2178335_2178641_-	NIPSNAP family protein	NA	NA	NA	NA
WP_011694838.1\|2178934_2179723_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011694837.1\|2179894_2181253_-	DUF3999 domain-containing protein	NA	NA	NA	NA
WP_011694836.1\|2181249_2184624_-	DUF2339 domain-containing protein	NA	NA	NA	NA
WP_077177926.1\|2185302_2186400_+	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.9e-27	33.8
WP_011547015.1\|2186392_2187289_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_006480572.1\|2187394_2188393_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_006480573.1\|2188497_2189445_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA

DBSCAN-SWA_4

2696942 : 2711760

Stx2-converting_phage(40.0%)

integrase,transposase

attL 2690169:2690184|attR 2713679:2713694

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2690169:2690184	attL	NA	NA	NA	NA
WP_012339748.1\|2696942_2698217_+\|integrase	site-specific integrase	C7BGE7	Burkholderia_phage	4.2e-235	91.0
WP_124484575.1\|2698370_2698733_+	hypothetical protein	NA	NA	NA	NA
WP_012339750.1\|2699062_2699257_+	hypothetical protein	NA	NA	NA	NA
WP_085966488.1\|2699288_2700526_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	8.6e-161	98.2
WP_012339751.1\|2700648_2702127_+	hypothetical protein	NA	NA	NA	NA
WP_012339753.1\|2703034_2704585_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.0e-155	56.1
WP_012339754.1\|2704636_2704978_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	1.2e-35	66.7
WP_157062223.1\|2704974_2705376_-\|transposase	transposase	NA	NA	NA	NA
WP_085962331.1\|2707508_2708742_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	2.4e-102	65.5
WP_012339756.1\|2709356_2710358_+	hypothetical protein	NA	NA	NA	NA
WP_012339757.1\|2710809_2711760_-\|transposase	IS481-like element ISBcen26 family transposase	NA	NA	NA	NA
2713679:2713694	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_010508

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_010512

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NC_010515

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection