Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
---|---|---|---|---|---|---|---|
NC_010549 | Exiguobacterium sibiricum 255-15 plasmid pEXIG01, complete sequence | 0 crisprs | NA | 0 | 0 | 0 | 0 |
NC_010550 | Exiguobacterium sibiricum 255-15 plasmid pEXIG02, complete sequence | 0 crisprs | NA | 0 | 0 | 0 | 0 |
NC_010556 | Exiguobacterium sibiricum 255-15, complete sequence | 1 crisprs | cas3,cas5,cas8c,cas7,cas4,cas1,cas2,cas14j,csa3,DinG,Cas14u_CAS-V,WYL,DEDDh | 0 | 2 | 2 | 0 |
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NC_010556_1 | 173195-174213 | TypeI |
I-C
Consensus repeat of NC_010556_1
|
15 spacers
spacers of NC_010556_1
>1.1|173227|33|NC_010556|PILER-CR,CRISPRCasFinder,CRT TTTTTGGCATAGACGCCATCTAGCGTGAGTTTA >1.2|173292|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT TATTCGGCGTTGCATAAAGGCGCGATGGAGACGA >1.3|173358|33|NC_010556|PILER-CR,CRISPRCasFinder,CRT TCCGTTGCTTTTTCCACCCTTTGAGGTGTCATA >1.4|173423|33|NC_010556|PILER-CR,CRISPRCasFinder,CRT ACCGACGCATCTTCTATGATGTCCGAGGAAATC >1.5|173488|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT TGCATACCAATGACCGCCGTCAATTTCGATATTT >1.6|173554|36|NC_010556|PILER-CR,CRISPRCasFinder,CRT AAGAATCGCAAGAAGACGCGCAAGGAAAAAGTACAC >1.7|173622|33|NC_010556|PILER-CR,CRISPRCasFinder,CRT ACATATATGATGTGTTTGATACAACCGGCGTGA >1.8|173687|35|NC_010556|PILER-CR,CRISPRCasFinder,CRT ACGTTTGAAGGATTTAAAATCACACGTACAGTAGA >1.9|173754|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT TTCTGTAAATAAGGGTAATCCATCTTGACTAAAA >1.10|173820|35|NC_010556|PILER-CR,CRISPRCasFinder,CRT ATTGTCTGCCAAGCAACGGATCAACTGCCATTGCA >1.11|173887|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT AACTGGGAAACATCTCAAAAGAACGGGCGCAAAA >1.12|173953|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT CCAACGCTCCTGCTGCAACTCACCCGTGATACCG >1.13|174019|33|NC_010556|PILER-CR,CRISPRCasFinder,CRT TTCCATCAACCGCAGGCGACGTTCTGGATCAAG >1.14|174084|33|NC_010556|PILER-CR,CRISPRCasFinder,CRT GCGCACGACGGGACAAAAGGAAATGTCATGGTC >1.15|174149|33|NC_010556|CRISPRCasFinder,CRT CGCTTCAAACGGTTGCCGTGTATCGCGTGTGAT |
cas2,cas1,cas4,cas7,cas8c,cas5,cas3 |
CRISPR arrays and Neighbor proteins around NC_010556_1
The CRISPR arrays of NC_010556_1 >merge|NC_010556|1|173195-174213|PILER-CR,CRISPRCasFinder,CRT GTCGCACTCCTCGTGAGTGCGTGGATTGAAATTTTTTGGCATAGACGCCATCTAGCGTGAGTTTAGTCGCACTCCTCGTGAGTGCGTGGATTGAAATTATTCGGCGTTGCATAAAGGCGCGATGGAGACGAGTCGCACTCCTCGTGAGTGCGTGGATTGAAATTCCGTTGCTTTTTCCACCCTTTGAGGTGTCATAGTCGCACTCCTCGTGAGTGCGTGGATTGAAATACCGACGCATCTTCTATGATGTCCGAGGAAATCGTCGCACTCCTCGTGAGTGCGTGGATTGAAATTGCATACCAATGACCGCCGTCAATTTCGATATTTGTCGCACTCCTCGTGAGTGCGTGGATTGAAATAAGAATCGCAAGAAGACGCGCAAGGAAAAAGTACACGTCGCACTCCTCGTGAGTGCGTGGATTGAAATACATATATGATGTGTTTGATACAACCGGCGTGAGTCGCACTCCTCGTGAGTGCGTGGATTGAAATACGTTTGAAGGATTTAAAATCACACGTACAGTAGAGTCGCACTCCTCGTGAGTGCGTGGATTGAAATTTCTGTAAATAAGGGTAATCCATCTTGACTAAAAGTCGCACTCCTCGTGAGTGCGTGGATTGAAATATTGTCTGCCAAGCAACGGATCAACTGCCATTGCAGTCGCACTCCTCGTGAGTGCGTGGATTGAAATAACTGGGAAACATCTCAAAAGAACGGGCGCAAAAGTCGCACTCCTCGTGAGTGCGTGGATTGAAATCCAACGCTCCTGCTGCAACTCACCCGTGATACCGGTCGCACTCCTCGTGAGTGCGTGGATTGAAATTTCCATCAACCGCAGGCGACGTTCTGGATCAAGGTCGCACTCCTCGTGAGTGCGTGGATTGAAATGCGCACGACGGGACAAAAGGAAATGTCATGGTCGTCGCACTCCTCGTGAGTGCGTGGATTGAAATCGCTTCAAACGGTTGCCGTGTATCGCGTGTGATGTCGCACTCCTTATGAGTGCGTGGATTGAAAT >NC_010556|1|1|173195-174148|PILER-CR GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TTTTTGGCATAGACGCCATCTAGCGTGAGTTTA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TATTCGGCGTTGCATAAAGGCGCGATGGAGACGA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TCCGTTGCTTTTTCCACCCTTTGAGGTGTCATA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ACCGACGCATCTTCTATGATGTCCGAGGAAATC GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TGCATACCAATGACCGCCGTCAATTTCGATATTT GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT AAGAATCGCAAGAAGACGCGCAAGGAAAAAGTACAC GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ACATATATGATGTGTTTGATACAACCGGCGTGA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ACGTTTGAAGGATTTAAAATCACACGTACAGTAGA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TTCTGTAAATAAGGGTAATCCATCTTGACTAAAA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ATTGTCTGCCAAGCAACGGATCAACTGCCATTGCA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT AACTGGGAAACATCTCAAAAGAACGGGCGCAAAA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT CCAACGCTCCTGCTGCAACTCACCCGTGATACCG GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TTCCATCAACCGCAGGCGACGTTCTGGATCAAG GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT GCGCACGACGGGACAAAAGGAAATGTCATGGTC GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT >NC_010556|1|1|173195-174213|CRISPRCasFinder GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TTTTTGGCATAGACGCCATCTAGCGTGAGTTTA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TATTCGGCGTTGCATAAAGGCGCGATGGAGACGA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TCCGTTGCTTTTTCCACCCTTTGAGGTGTCATA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ACCGACGCATCTTCTATGATGTCCGAGGAAATC GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TGCATACCAATGACCGCCGTCAATTTCGATATTT GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT AAGAATCGCAAGAAGACGCGCAAGGAAAAAGTACAC GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ACATATATGATGTGTTTGATACAACCGGCGTGA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ACGTTTGAAGGATTTAAAATCACACGTACAGTAGA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TTCTGTAAATAAGGGTAATCCATCTTGACTAAAA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ATTGTCTGCCAAGCAACGGATCAACTGCCATTGCA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT AACTGGGAAACATCTCAAAAGAACGGGCGCAAAA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT CCAACGCTCCTGCTGCAACTCACCCGTGATACCG GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TTCCATCAACCGCAGGCGACGTTCTGGATCAAG GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT GCGCACGACGGGACAAAAGGAAATGTCATGGTC GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT CGCTTCAAACGGTTGCCGTGTATCGCGTGTGAT GTCGCACTCCTTATGAGTGCGTGGATTGAAAT >NC_010556|1|1|173195-174213|CRT GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TTTTTGGCATAGACGCCATCTAGCGTGAGTTTA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TATTCGGCGTTGCATAAAGGCGCGATGGAGACGA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TCCGTTGCTTTTTCCACCCTTTGAGGTGTCATA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ACCGACGCATCTTCTATGATGTCCGAGGAAATC GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TGCATACCAATGACCGCCGTCAATTTCGATATTT GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT AAGAATCGCAAGAAGACGCGCAAGGAAAAAGTACAC GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ACATATATGATGTGTTTGATACAACCGGCGTGA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ACGTTTGAAGGATTTAAAATCACACGTACAGTAGA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TTCTGTAAATAAGGGTAATCCATCTTGACTAAAA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT ATTGTCTGCCAAGCAACGGATCAACTGCCATTGCA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT AACTGGGAAACATCTCAAAAGAACGGGCGCAAAA GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT CCAACGCTCCTGCTGCAACTCACCCGTGATACCG GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT TTCCATCAACCGCAGGCGACGTTCTGGATCAAG GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT GCGCACGACGGGACAAAAGGAAATGTCATGGTC GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT CGCTTCAAACGGTTGCCGTGTATCGCGTGTGAT GTCGCACTCCTTATGAGTGCGTGGATTGAAAT
>NC_010556.1|WP_012369065.1|172723_173014_+|CRISPR-associated-endonuclease-Cas2 MLVLITYDVNTVSPGGKKRLRHVAKLCQRYGQRVQNSVFECIVDQTEFMLLKLRLKEIINHERDSLRFYKLGNQYISKVEHYGIKSSLDVEGPLIF >NC_010556.1|WP_012369064.1|171678_172710_+|type-I-C-CRISPR-associated-endonuclease-Cas1 MKKLLNTLFINQSDSYLALDGGNVLVKADGQVLGRVPLHNLEGIVAFGYTGASPALMGHCAENGIALTFMTKNGRFLARVIGESRGNVVLRKTQYRRSDDEVASARLAKNFILGKLYNQKWMLERMTRDYPLRLDVERFKTTSQDMTETMREIQVCENLERLRGLEGTIAVRYNRLFDSMILQQKEDFHFKGRTRRPPLDRVNAMLSFAYSLLARDVSAALEAVGLDAYVGFLHRERPGRASLALDVMEELRGIYADRFVLSLINKKVIQGKDFLQKENGAVIMTEEGRKTFLTAWQKKKQETIQHPYLKEKMMWGLVPYEQALLLARHLRDDLEAYPPFLYK >NC_010556.1|WP_012369063.1|171019_171682_+|CRISPR-associated-protein-Cas4 MDYKRYDDTYLLLSGIQHFQFCPRQWTLIHIEQQWVENVRTIEGQALHQKADDPFQREKRKEKLIVRGMAIKSEQLNISGQCDVVEFIEDASGVPIHGTPGTFIPVPVEYKRGKPKVNPADELQLAAQAMCLEEMLLCAVPIGYLYYHETKHRHPIPITKELRDLVLATVTKMNDYYSRRHTPRAKIGPHCKSCSLQEICLPRLTERESVADYMNRRLWE >NC_010556.1|WP_012369062.1|170172_171030_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2 MTTLDRKIDFTVILSVTKANPNGDPLNGNRPRQNYDGYGEISDVAIKRKIRNRLQDMGESIFVQSNDRNLDGYASLRDRAEANDTIKKLMKTKNASDQVAAEACATWMDVRAFGQVFAFKGDKAGGVSVGVRGPVSIHTATSVAPIDVTSMQITKSVNSESGKERGSDTMGMKHRVDHGVYVFNGSINTQLAEKTNFTQEDAEKFKLALVSLFENDASSARPEGSMEVHKVYWWEHDSKLGRFSSAKVHRAVSVQALTDEPKSFLDYEIKVDALEGFTPEILDGL >NC_010556.1|WP_012369061.1|168310_170176_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1 MSVWKQLYDTYEMNLKHVGQFESRWEGQDFTLLPLSHTTQTAHVTVTVTLDGDFHSATVIEKGHGNTLIPCTEDSANRAGSVVAPYPLHDKLAYVAGDFLKYGGVYKGENAHHAYLSQLKAWVETAPYDPLESIYCYVQKGQLIEDLIQEGIFSATGSGELRWTWKEAGDKPPIYGLVTGGLEGTFVRFQVRSTEGVQRQPWRDKAFFDSFITFYGTRPGKEGLCFVTGKQERLSSKHTNKIRNSGDKAKLISANDSSGFTFRGRFDKPDEAASISYQASQKAHNALKWLIQRQGRSIDQRVFLIWGNQQPSLPNPLENTLSLAQLFGEKEELISHTVQEGALAFSDALLGFKRRLPKQEVNILTLDAATTGRMAILYYRTFDQETYFKRLEQWHTKYPWEYIYQDADKKRQVYIGAPSLKDIALMTYGTRGNEKLIKATVERLLSCVIDERRVPMDIIRCLTQRASNPVGMDHWEWEKTLSIACGMVNKKEEMTVSLDQEINDRDYLFGRLLALADYLERRALGQDNRATNAIRYMNAFSQNPARTWMTIQSALQPYQAKLGGKVLFINRQIDEIGSRLTIEQFTNKPLSGKYLLGFYSQRHELYQKREETFDKEERGEA >NC_010556.1|WP_012369060.1|167597_168296_+|type-I-C-CRISPR-associated-protein-Cas5 MRNTIEFKVYGEYALFTDPLTKLGGEKMSYQVPTYQAIKGIVESIYWKPTILIVVDAIRIMHPIKMEAKGMRPIEYGGGNSLAHYTYLRDVCYHVRAHFEFNENRPDLVFDRNEGKHYSIMKRSLEAGGRRDIFLGARECQAYVEPIDFDSDDSFYDGADLHFGTMVHGFDYPDETGRDELAVRLWNPVMKDGVIAFPRPETCSLVKTVKSMSAKPFDASNMTGVVELYEQL >NC_010556.1|WP_012369059.1|165260_167582_+|CRISPR-associated-helicase/endonuclease-Cas3 MRYIAHVHSTDGKIQEVKTHLLEARGLAENWGKDIGLMHVCGVAGLLHDIGKLSDEFQTYIRKATSGEHVRRGEVDHATAGGRLLFEQLKGNRGQLLAEMVANAILSHHGNLQDYYLEEESPFLQRVERKELPSYKMCRERFFQVVIDEQEFNRYVERAVDELYSWILRDGGSTARVSLATKYIFSILLDADRTNTREFEQGITTMTTQVDFEELKRRLETHLSTFSQQTEITPINRLRQEMSDACRVFANQPSGVYTLSIPTGGGKTLASLRYALHHATTYQKKRIIYVVPFTTIIEQNARVARDVLGTDMILEHHSNVVEIEDASDDVMDIQAKLHLAKDNWDAPIIFTTMVQYLNTFYAKGNRNTRRLHHLSEAIIIFDEVQKVPLKCISLFNESVKFLKDSLESSVVLCTATQPALEFVKYQLHQDGEMIDALPQVMEAFRRTDLEVVEGEMDTARLAEVVTRQVEEKNSVLVILNTKSVVKKLYETLRQQHPDEEVIHLSTAMCAAHRMDILRTINQRLEQGERIICISTQLIEAGVDVSFACVIRSLAGLDSIAQAAGRCNRHGEVARQTVYLVDHIEENLKHLPEIARGKEIVRAILIDFLRDEQSYEGNLLGTVAMTRYFQELYDASEVELDFPIRGTTLTLAPMLFKPRKVPELILSSRHRTVANHFKVIEDMTETVLVPYGEEGKRLIASLNGQADWEDLRKWLKQAQQYSINLHAHERKKLEATQGLNVILDGTVLVLSERAYDDHYGLNLEQDSLLEDLMM >NC_010556.1|WP_012369058.1|164411_164972_+|isochorismatase-family-protein MRQAVLVIDFQQDLVEGTAEEAGVHAKENMIQVINQVVQEAENEGHVMIFIRDLDVANGQGEGFAVHSSIQIPDQAVTFDKAATNSFHGTPLLDYLKQHRVEHIVILGCKTEHCIDTAVRSATVNGFDVTLVADGHTTNGSDVLSAEQMIAHHNQVLHGHYNVEHFAIVRPSTETVFEPIHHQYRK >NC_010556.1|WP_012369057.1|164083_164266_-|hypothetical-protein MELVPLFFVTFIIVLAVNLFLDKMIMNREMTRPVFLKNLLICFLISLVLLNVFYLQSLMS >NC_010556.1|WP_012369056.1|163438_164038_+|short-chain-dehydrogenase MRILVVGASGTVGQAVVAQLSERHEIIRAGRTGMDVQVDIMSEDSIRSMYETVGPVDAVISATGGAHFGPLTNLTPALNQIGIDSKLKGQVNLVLLGLDAVRDGGSFTLTTGIMMDDPIRQGASAALANGGVKAFVHAAAIEMPRGIRINSVSPNVLIESLDKYGPFFRGFEAVPASRVATAFEKSVEGAQTGQNYEVY >NC_010556.1|WP_012369066.1|174417_175410_+|NAD(P)-binding-protein MEQQKRIGIIGGGLAGVFAARQLMTEGYAVEIIEKSQSVGGRMATRRIDEGTADHGAVFFTVRTDELAQEVDEWLEQGLVRKWFGDDFPRYVAVNGMNQLVQSIARGIPVHLNEQVERILAEGPALQTTAAAETRTYDAILLTAPVPQAYDLLSASPLMLVESDHAHLGKVTFEPTFVGLFELEKSPDLGEIGLLDDGLVSGMLKIVNNAQKEVSATPLLSVYMTGDWSEVWYDKGEDETLAEIERLLQEQLGPVQLVSKQLKRWRYAQARDVFRTPYLKLEQHPLWLAGDAFLDPKDTSGRTRVESAVISGLRVASAMDTHFKAVLTEQ >NC_010556.1|WP_012369067.1|175456_175804_-|helix-turn-helix-transcriptional-regulator MNPASTTDSPLSQRTACPVTRAQTIMAGKWKIVLLWHLSTGTKRFHELEQLLPGISKGILTRQLRELEADSMINRRVYREIPPKVEYSLTEIGHSFLPILDQMAAWSNQHFPPES >NC_010556.1|WP_012369068.1|175929_176787_+|SDR-family-oxidoreductase MKLLVTGATGKLGTKIVEHLLTKIEAENVIVSVRDPKKANELASRGIEVRHGDFDEPDTLQQAFAGVDRLLIISTDGEEATRIRQHTAAVEAAKAAGVGLIAYTSIANAEASQNFLARTHQVTEQLIRETGIPFLFFRNNWYLENEQSTIDAVRAGQDWLTSAGNGTVGWALQEDYAEAIATVLVDPKPTKSIYELSGPLHTQQDIAEALGQVLGRPVQVKQVDSATYTAIMQQAGVPEFLLPMLQAIQEGIAAGTLAVESQDFEHILDRPPVSLEDGLRQLVQR >NC_010556.1|WP_012369069.1|176860_177712_+|polyphosphate--nucleotide-phosphotransferase MDIKKYRVTPGESIHLSDYPTSDENRIAEDELLDQHIPKSVEELKELHWRLHAEEKNGVLVILQAIDAGGKDEAISYIFSNLNAQGLRTLSVKKPSDTEKKHDYLWRIHEGLPEKGEVGILNRSYYEEVIAPRIHDLLEEEEVPDDQDVWKMRYRQINDFERYLVENGFRVVKFLFNVSKDEQKKRLLERIKDPKKNFEFSFSDVEEREHWDEYQDIFAELVSHTSTEHAPWHVLPADDEWFTRYIVTEVMNDVLREIDPQYPKLTDEDQEKLDEAIKKLENE >NC_010556.1|WP_012369070.1|177861_178200_+|alkylphosphonate-utilization-protein MNEYPNCPKCGSAYTYEDGNVFVCPECAHEWTAADAEVAEEATVIRDANGNVLNDGDTITVIKDLKVKGTSLVVKQGTRVKGIRLVDGDHDIDCKIDGLGAMKLKSEFVKKI >NC_010556.1|WP_012369071.1|178338_178764_+|DMT-family-transporter MRGILFAISGGFFLTLQSVANARISNGIGTWQAATLTQMTGFVVALLITLILRDRTFRQMKDVKVLYLSGGALAAAVLFSNMTAVHLMGVTLTISLFLIAQLGLALVIDWNGWFGMIKRRLQLPQVIGILMMIGGVLILKW >NC_010556.1|WP_012369072.1|178776_179445_+|Crp/Fnr-family-transcriptional-regulator MEQAQLDEYLDRFQLTDVFAGGLREHLQPVAFQAGDWLCRQGDAADRMYLLLEGKLKITHMSATGKRLVLSFKHPFDLVGDIEYVRRTPLMNTVEAVTPVKAVSISYAALEQKGADNPALLRFLLETITMKFELKSHSMSFNLLYPVEVRLASYLLSMTPETPTLPVSDLVDAADLIGTSYRHLNRVLRQFSQDNLIERTNRTITIIDREGLTERVGESIYE >NC_010556.1|WP_012369073.1|179457_179928_+|DMT-family-transporter MTLGIVLALFGGMMVCIQNTFNAKVKEQVGAWATTTLVLGLGFLASLTIGLLVEGGGLFSTSGMQPWFWFSGIIGVGVVLCVTQGVQQLGPSYAISIVMVSQILFALLWDTLGWFGLDQVAFTWTKAVGVVLIGGGVLLFQLGGKLTERRMLRKGA >NC_010556.1|WP_012369074.1|179931_180645_+|noncanonical-pyrimidine-nucleotidase,-YjjG-family MNYTTLLFDIDHTLLDFDATERAALRQLFEDEQLEWTEEREARYRTINRSLWQALERGEITRQEVITSRFVTFFAEQGRTVDGSRMDTRYRAYLSQGTELIAGAIELLDSLKEKYQLYVVTNGVAATQRARLKGSGLAPYFDGIFVSEETGYQKPMPAFFDYVFDRIPNVRRDQTIIIGDSLTADIQGGILAGIATCWFNPTHAAAPAELMPTYTINQLNQLVTLLGTKEVVWTTSK >NC_010556.1|WP_012369075.1|180803_181244_+|GNAT-family-N-acetyltransferase MQIELRPVTNENWEACCALELTAEQQGFIEPNVYSIAQAGFEPALVMRAIYAADELTGFLMYNSEREELDGYWIYRLMVDHRHQGAGIGREAVRLLLAEMQQLPQAACIVVGYHPDNHVAHQLYGRLGFIDYGDRFGKEMAVRYTF |
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CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
---|
CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
---|---|---|---|---|---|---|---|---|
NC_010556_1 | 1.12|173953|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT | 173953-173986 | 34 | NZ_CP013553 | Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence | 67147-67180 | 8 | 0.765 |
NC_010556_1 | 1.12|173953|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT | 173953-173986 | 34 | NZ_CP013559 | Rhizobium phaseoli strain N841 plasmid pRphaN841b, complete sequence | 67187-67220 | 8 | 0.765 |
NC_010556_1 | 1.12|173953|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT | 173953-173986 | 34 | NZ_CP013564 | Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence | 67147-67180 | 8 | 0.765 |
NC_010556_1 | 1.14|174084|33|NC_010556|PILER-CR,CRISPRCasFinder,CRT | 174084-174116 | 33 | MG592433 | Vibrio phage 1.052.A._10N.286.46.C3, partial genome | 18259-18291 | 9 | 0.727 |
1. spacer 1.12|173953|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013553 (Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence) position: , mismatch: 8, identity: 0.765
ccaacgctcctgctgcaactcacccgtgataccg CRISPR spacer ccgccgctcctgctccaactcacccgcgaatggg Protospacer **. ********** ***********.** *
2. spacer 1.12|173953|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013559 (Rhizobium phaseoli strain N841 plasmid pRphaN841b, complete sequence) position: , mismatch: 8, identity: 0.765
ccaacgctcctgctgcaactcacccgtgataccg CRISPR spacer ccgccgctcctgctccaactcacccgcgaatggg Protospacer **. ********** ***********.** *
3. spacer 1.12|173953|34|NC_010556|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013564 (Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence) position: , mismatch: 8, identity: 0.765
ccaacgctcctgctgcaactcacccgtgataccg CRISPR spacer ccgccgctcctgctccaactcacccgcgaatggg Protospacer **. ********** ***********.** *
4. spacer 1.14|174084|33|NC_010556|PILER-CR,CRISPRCasFinder,CRT matches to MG592433 (Vibrio phage 1.052.A._10N.286.46.C3, partial genome) position: , mismatch: 9, identity: 0.727
gcgcacgacgggacaaaaggaaatgtcatggtc CRISPR spacer tatcacgacgggacaaaacgcaatgtcagcggg Protospacer *************** * ******* *
Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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DBSCAN-SWA_1 |
1641850 : 1648805
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >NC_010556|1641850:1648805|DBSCAN-SWA TTTAGTAAACTTTATCACCATTAAAGATTGAATTTTTAACCACTACATAATCAACTGTTCGAATGGCTTGCAATTTATTACCGCCGGCATATGAAATCGCCGATTGTAAATCTTGTTCCATCTCAGTTAACGTATCAGATAAACTGCCTTTAAATTCAATGAACATTTTTTTACCTTCAACGTTTTTCTTTTCACCTTTTTGAAATTCCGAAGCCGAACCAAAATATTCTTTCACTTGAAGACCGTCAACTTCCTGCATTTCACCCGGTGACTCTTCGTGTCCGGCAAATAAGGAACCGATCATCACCATCGTTGCCCCGAACCGGACTGATTTGGCAATATCTCCATGTGTCCGGATTCCACCATCTGCGATGATTGGTTTGCTGGCGGCCTTTGCACACCATCTTAATGCGGCTAATTGCCAGCCGCCGGTACCGAAACCTGTTTTGATTTTCGTAATACAGACTTTCCCCGGTCCGATCCCGACTTTTGTAGCGTCTGCGCCGGCATGTTCCAGTTCGCGGACCGCTTCCGGAGTACCGACATTACCTGCGATGACAAAACTTTCCGGTAGTATTTGTTTGATATGTTGAATCATCCGGATGACTGCTTCTGAGTGTCCGTGGGCAATATCAATCGTGATATATTCCGGTGTCAATCCTTCTTGCGCCAACGTTTCGATGAACGTATATTCTTCTGTTTTCACACCGACACTGATCGAAGCAATCAATCCCCGCTGTTGCATCTCGCGAACGAAGTTCAGTCGCGTTTCCGGCTCGAACCGGTGCATGATATAAAAATAGCCGTTTTCAGCCAGAAAAGTTGCGATTTTTTCATCGATGATCGTTTGCATATTGGCTGGAACGACAGGTAATTTAAAGCGTCGTCCTCCAAATTCAACCGTCGTATCACACTCTGAACGACTTCCGACGATCGATTTAGCTGGAATCAATTGAATATCTTCATAATCAAATACTACATCCATCATTAACACCCCAAATAACGAATATTTTTTTATAAATAGCTTCTTAATGTTCGGACTATAATACTATAACGAACGATTAAAGGTTTGTCAAAAATATTTTGCTAAAAAACATACTTTTTACCTTTAATTTTATTTAATGTTCGTCTTTTAAATCAAAAAAACCCTCAGAGAACAATTTCAGAGGAATTTTTTATAAAAATAGAATCTACTCCTTTTTTTCAACATGTTCAGAAAAAAGCTTAACCGATATTGGTTCAATCGAATAGAAATTCTTCTTTCAACAATGCAAATAAAATAAAATCTTCCCATGCTCCGTTAATATACAAACTTTTTTTAGCAAGGCCTTCTCTTCTGAACCCTACTTTTTCCAACACACGGATGGAACCAATATTTTCCGGCATGACCTCTGCCCGCAACCGGTGAAACTGATGCGTCTCGAACAAAATTCTTGCGGCTTGCCGGACCGCTTCTGCCATGATCCCTTTCCCGTTATGTTCCCGGTCCAATTGGTATCCGATCATACAGGTCTCTGCCGGAAACCGTTCGACGAATACAGCAGATACATCACCGATCAGTTGATTGTTTTCCGTTAAAAACACTCCAAAGGCATACGAGCGGTCTGACAAGCTGTTTTCCATCATCTGTTCGATTCGTTCTTGTTGTTTTGTCAACGTGTAAGCATTTGCTTGCGGTTTCACCGGCATCCAGTATTCAAAATGTAATTGATTTTTTACGTTTAACTCGAGCAGCTGTTCTGCATCAGACAGCTGGTACGGGCGAAGAAAAATAGTTCCCATGATTAATTTCCTCCATTAAAAAATAGTATGAATTCATAATTCTTCAACTTTAGACAGTTAAAGCGTTTGACAATTCGTTTTTCGGGAAAAATATAAAAACCTGAATAAGTAACAAAGTGTTTACAGAGGGGATGTAAACCATCAAAAGGAGGAGAGCATGCGTACAGATACAGAATTATTCAAACAAATCGAATTAAAAAATAAGCAAGCTCTCGAAGCGTTGTACGACCGTTACGAGAAATCCTTATACTTATTCCTTACACGTATGTTAAATGACGAAAACAGAGTCCAACTTACTTTAAGACAAATCTTTCAGGATGTCTGGACAAGTCCTAATCAATACCCATCCATTCACGGTTATTTGATCAAAGCCGTGAAACAAGTTCGATCGCAACGCGAACCGATTCATTAATTCTTCTTTTTACGATGTATTTCTTCTATAGAAGAAGATGATTGATGTTATAGATATTCGAAAAATTTAAATTAATCCCTTTATCTTTTAAAGATCAGTTTGATAATTTTAGGGAGAACTTCTACTTTTTTTGTTTATTACTTCCTTTTTCTATTTAGTTATGGTACACTATAATCAATTATTGTTGTTCGGTGGAGATGCAAAGTTTACACTTTCGACTCGATGAAATTGATCACAGTAGTAATAATTTAGTGTGACTTAGTCATACGCAGGAGGCAACACACATGGAACAAGGTAAAGTAAAATGGTTTAACGCAGAAAAAGGTTTTGGCTTCATCGAACGTGAAAGCGGCGACGACGTTTTCGTTCACTTCTCAGCTATCCAAACAGACGGTTTCAAATCACTTGACGAAGGTCAAGAAGTTTCGTTTGAAGTTGAAGAAGGTCAACGCGGACCGCAAGCAACTAACGTTACTAAACTTTAATTTTCTTAGAGGATTCGCTGATGCGGATCCTCTTTTTTTTATCAAAATTTGACGAGAATACTCCCACTTTTTAACATTCAGGCCGAAGTCCTCGTGCGAGTGGGAGTATTCTCGTCTTCGGGCAAAGCGTGTCTTGCGACACGTCAATTTTCGACCGCTCGGTTGGATAACTCAGGAATCTACTACCTCTTAATGAAGCGTATGTAGAGTTAATTCAATCTTTTTTTGCCTATCCCTATCTTTTTATATCTCGTCATGGTATATTATGAACAATTATTGTTGTTCGGTGGAGATATGAAGGTTACACTTTTGACTCGATGAAATTGATCACGGTAGTAATAATCAGTGTGACTTAGTCATACGCAGGAGGCAACACACATGGAACAAGGTACAGTAAAATGGTTTAACGCAGAAAAAGGTTTTGGCTTCATCGAACGTGAAAACGGCGACGACGTTTTCGTTCACTTCTCAGCTATTCAAACAGACGGTTTCAAATCACTTGACGAAGGTCAAGAAGTTTCGTTTGAAGTTGAAGAAGGTCAACGCGGACCACAAGCAACTAACGTTACTAAACTTTAATTTTCCTGAGAGGAAGCGCAGCCGCGTTTCCTCTTTTTTTAATTCTTTTCAATCTCCCCTATCTTTTTCAAACCGGACATGGTATATTATTAAGTAATTATTGTTGTTCGGTGGAGATACAAAGGTTACACTTTTGACTCGATGAAATTGATCACGGTAGTAATAATCAGTATGACTCAGTCATACGCAGGAGGCAACACACATGGAACAAGGTAAAGTGAAATGGTTTAACGCAGAAAAAGGTTTTGGCTTCATCGAACGTGAAAGCGGCGACGACGTTTTCGTTCACTTCTCAGCTATTCAAACAGACGGTTTCAAATCACTTGACGAAGGTCAAGAAGTTTCGTTTGAAGTTGAAGAAGGCCAACGCGGACCACAAGCAACTAACGTTACTAAACTTTAATTTTCCTGAGAGGAAGCGCAGCCGCGTTTCCTCTTTTTTTAATTTTTTTCAATCTCCACTATCTTTTTCAAACCGGACATGGTATATTATTAAGTAATTATTGTTGTTCGGTGGAGATACAAAGGTTACACTTTTGACTCGATGAAATTGATCACGGTAGTAATAATCAGTATGACTCAGTCATACGCAGGAGGCAACACACATGGAACAAGGTACAGTAAAATGGTTTAACGCAGAAAAAGGTTTTGGCTTCATCGAACGTGAAAACGGCGACGACGTTTTCGTTCACTTCTCAGCTATTCAAACAGACGGTTTCAAATCACTTGACGAAGGTCAAGAAGTTTCGTTTGAAGTTGAAGAAGGCCAACGCGGACCACAAGCAACTAACGTTACTAAACTTTAATTTTCCAAGACTCTGCTGTTGCAGGGTCTTTTTTGTTTGATTTTTCTTTGAACTGACTGTTCATTCTAAGACCGAAAGGATGATATTCATGGAACCATCAGCTAAACACCTTCAACTGCAAACACTCTTGAGCGAACGACATGCTTATTTGATGGAAGGAAACCGAGAAGCGATGCATCAGCTGCTTTCAAGTGATTTCTCATTCATTGACGGTCAGGGACGGCAGTTTGATGCTGAGACGTATCTCGATCATTATGTCGATCCGGACCAAATTCAATGGAGTAATCAAATCAGTGAATCGATGGTGGTTGAAGTCTTCGAGACGACGGCTCTCGTCCAGGAAATCGTCGAAGATCATTTTTCATACGGTCGTAGCATGTACATCGGCCGTTTCCGAAGTGTTTCACTTTATCACTGGGCAAACGAAGGATGGAAATGGCATTTTCACCAACTGACACCTCTTGATCCTTCTTAAGAACAATAAGCTGTACGGATTTCCCGATCGGACCAGTCACTCTTCAGGAGGGTTGGTCTTTTTTAATGCACGGATTGATTCGCCCTCCTCTTTCAGAAACTTCATCATACTCGAAATGAAGTTTGATAAACTGTTTTCATTCCGTTACACTTTAGTTGTGAATATTTTCTGAAAATTATTGGAGGCGGAATGCGATGACTGTATTTAACTTTTCAGCCGGTCCGGCAGTCCTACCGGTACCGGTCTTACTTAAAGCTCAATCCGAGCTTCTGAATTATCAAGGATCTGGACAGTCTGTTTTAGAATTGAGTCATCGTTCCGGCTTATTTGAACATATCATCGAGGAGACAGAGTCTCTGCTTCGGGAGCTTCTCCAAATTCCGGATCATTACCGTGTCTTGTTTTTACAAGGCGGTGCAACCCTTCAATTTTCTATGTTACCGCTTAATTTAGCGACTGTCCGTCAGCGTGTCGACTTTATCGATACCGGAAGTTGGTCACAAAAAGCGATGCAGGATGCCGAGGCTTTTATTCAGACCAATATCGTTGCTTCCTCAAAAGCGGACCGCTATCGTTCGATCCCGACCGATACAATCCGTTCTGACGCCGATTACCTCCATATCACCTGGAATAATACACTCGAAGGAACCACGTTTACTTCGGTTCCAACAGTCGATGTCCCGTTAGTGGCAGATTTCTCCTCCTCCATCTTGTCGGAACCGATTGATGTCAGTCAGTTTGACGTGATATATGCCGGGGCTCAAAAAAATCTGGGATCGGCCGGTATGACGCTTGTCATCATAAAGGAGGATCTGTTACAACGAACACCGGACCGTTTAGGATCCTATTTACGGTACGATACGCATGCTACTCATCATTCTTTATACAATACACCACCCACATACAGCATCTATTTGACGAAACTGGTCCTCGAATGGATTAAAGAGCAGGGATTCGACACAATCGTCGAGCGTAACCGCAAGCAGGCCGCTTCCCTGTATGCTTATTTGGACCAATCTACCTTATTCTCAAATCCTGTTGCTATACAGGATCGAAGCCGAATGAATATTCCTTTTACGACCAGTGAAACAGAGTTAGATGAACAATTCCTGCAATTTGCAGAACGTCATCAGCTCGTGAATTTAAAAGGACATCGTTCTGTCGGAGGAATGCGTGCCAGTCTTTATAACGCGATGCCAACGGCGGGCGTCGATGCCCTGATTGCCGTATTAGAACGATTCGAACAGGGGGAACGGTAAATGCATCATGTACAACTATGGAATGACGTGTCTGAAAAAGGGTTAAAACGCTTCACCGACCACTATGTCGTCAAACAAGACATCGAGGCCGCGGACGCTTTTCTCGTCCGCAGCAAAGATTTACACGGCATGAAGTTCCCGCCTTCCTTAAAAGCGGTCGCCCGCGCCGGTGTCGGCGTCAACAACATCCCGCTCGACCAATTGGCGAATCGGGGAATTCCGGTTTTCTCAACCCCCGGCGCAAATGCCAACGCTGTGAAAGAGCTGGTCATCGCAAGCTTATTCCTGACTGCCCGGAAATTAATCCCCAGTATCTTATGGACCAACAACCTGCGTGGACCGGACATCCCGGAACGGATTGAAGCGAACAAAAAACAATTTGCCGGCACAGAGTTACTCGGAAAACGGATCGGTATCGTCGGACTCGGTGCGATTGGGGCCAGCTTAGCGAATACACTGCACGAACTCGGGATGACGGTTTCCGGATACGATCCGCATATGTCCGTCGAATCTGCATGGCGCGTCTCGAATCAGGTTCACCGCGTCACCAATCTTGAAGAATTGCTCACGACAAGTGATTACATTACACTCCACTTGCCGTTGATTGATTCCACCCAACATCTGCTCGATGAACGGTTACTCGGAAAAGTCAAACAAGGAGCAACATTACTCAATTTTTCACGTGGTGAATTAATTGACGAACAGGCTTTGGCAACGGTGTTGAAATCAGGGCGGTTATCTAACTATGTCACTGATTTTCCGAATGCTTTCATTCTTTCTCTTCCTCGTGTCATTCCACTGCCGCATATCGGCGCGTCAACGGCGGAAGCAGAAGAAAATTGTGCCATCATGGCTGTCGATCAATTGAAGCTGTTCCTTGAGACCGGCAACATCCGGAACGCGGTGAACTTCCCATCGGTCGAATTACCGTATGCCGGTAAACGTCGCCTGACAATCGCCCATCAAAATATTCCGAACATGGTCGGTCAAATCGCCTCGGTCCTCGCGACCGAACAAATCAATATTGCCAATATGATCAACGGCAGTAAGGATGGTATCGCCTACACGATCATCGATATCGATAACCATCTGGATGAAACGATTTCACTGGAACAATTAAACGCCATTCCCGGTGTACTGAAAACAAGATTACTTTAA
Protein sequences of DBSCAN-SWA_1 >NC_010556|1641850:1648805|1641850_1642834_-|WP_041261628.1|DBSCAN-SWA MDVVFDYEDIQLIPAKSIVGSRSECDTTVEFGGRRFKLPVVPANMQTIIDEKIATFLAENGYFYIMHRFEPETRLNFVREMQQRGLIASISVGVKTEEYTFIETLAQEGLTPEYITIDIAHGHSEAVIRMIQHIKQILPESFVIAGNVGTPEAVRELEHAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPGEMQEVDGLQVKEYFGSASEFQKGEKKNVEGKKMFIEFKGSLSDTLTEMEQDLQSAISYAGGNKLQAIRTVDYVVVKNSIFNGDKVY >NC_010556|1641850:1648805|1646001_1646388_+|WP_012370559.1|DBSCAN-SWA MEPSAKHLQLQTLLSERHAYLMEGNREAMHQLLSSDFSFIDGQGRQFDAETYLDHYVDPDQIQWSNQISESMVVEVFETTALVQEIVEDHFSYGRSMYIGRFRSVSLYHWANEGWKWHFHQLTPLDPS >NC_010556|1641850:1648805|1647647_1648805_+|WP_012370561.1|DBSCAN-SWA MHHVQLWNDVSEKGLKRFTDHYVVKQDIEAADAFLVRSKDLHGMKFPPSLKAVARAGVGVNNIPLDQLANRGIPVFSTPGANANAVKELVIASLFLTARKLIPSILWTNNLRGPDIPERIEANKKQFAGTELLGKRIGIVGLGAIGASLANTLHELGMTVSGYDPHMSVESAWRVSNQVHRVTNLEELLTTSDYITLHLPLIDSTQHLLDERLLGKVKQGATLLNFSRGELIDEQALATVLKSGRLSNYVTDFPNAFILSLPRVIPLPHIGASTAEAEENCAIMAVDQLKLFLETGNIRNAVNFPSVELPYAGKRRLTIAHQNIPNMVGQIASVLATEQINIANMINGSKDGIAYTIIDIDNHLDETISLEQLNAIPGVLKTRLL >NC_010556|1641850:1648805|1643088_1643631_-|WP_012370555.1|DBSCAN-SWA MGTIFLRPYQLSDAEQLLELNVKNQLHFEYWMPVKPQANAYTLTKQQERIEQMMENSLSDRSYAFGVFLTENNQLIGDVSAVFVERFPAETCMIGYQLDREHNGKGIMAEAVRQAARILFETHQFHRLRAEVMPENIGSIRVLEKVGFRREGLAKKSLYINGAWEDFILFALLKEEFLFD >NC_010556|1641850:1648805|1644327_1644528_+|WP_012370557.1|DBSCAN-SWA MEQGKVKWFNAEKGFGFIERESGDDVFVHFSAIQTDGFKSLDEGQEVSFEVEEGQRGPQATNVTKL >NC_010556|1641850:1648805|1646582_1647647_+|WP_012370560.1|DBSCAN-SWA MTVFNFSAGPAVLPVPVLLKAQSELLNYQGSGQSVLELSHRSGLFEHIIEETESLLRELLQIPDHYRVLFLQGGATLQFSMLPLNLATVRQRVDFIDTGSWSQKAMQDAEAFIQTNIVASSKADRYRSIPTDTIRSDADYLHITWNNTLEGTTFTSVPTVDVPLVADFSSSILSEPIDVSQFDVIYAGAQKNLGSAGMTLVIIKEDLLQRTPDRLGSYLRYDTHATHHSLYNTPPTYSIYLTKLVLEWIKEQGFDTIVERNRKQAASLYAYLDQSTLFSNPVAIQDRSRMNIPFTTSETELDEQFLQFAERHQLVNLKGHRSVGGMRASLYNAMPTAGVDALIAVLERFEQGER >NC_010556|1641850:1648805|1645712_1645913_+|WP_012370558.1|DBSCAN-SWA MEQGTVKWFNAEKGFGFIERENGDDVFVHFSAIQTDGFKSLDEGQEVSFEVEEGQRGPQATNVTKL >NC_010556|1641850:1648805|1645309_1645510_+|WP_012370557.1|DBSCAN-SWA MEQGKVKWFNAEKGFGFIERESGDDVFVHFSAIQTDGFKSLDEGQEVSFEVEEGQRGPQATNVTKL >NC_010556|1641850:1648805|1643788_1644043_+|WP_012370556.1|DBSCAN-SWA MRTDTELFKQIELKNKQALEALYDRYEKSLYLFLTRMLNDENRVQLTLRQIFQDVWTSPNQYPSIHGYLIKAVKQVRSQREPIH >NC_010556|1641850:1648805|1644906_1645107_+|WP_012370558.1|DBSCAN-SWA MEQGTVKWFNAEKGFGFIERENGDDVFVHFSAIQTDGFKSLDEGQEVSFEVEEGQRGPQATNVTKL |
10 | Lactococcus_phage(57.14%) | NA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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DBSCAN-SWA_2 |
2379679 : 2387527
Sequences of DBSCAN-SWA_2
Nucleotide sequences of DBSCAN-SWA_2 >NC_010556|2379679:2387527|DBSCAN-SWA GTTATTGTGCAGCGACTTCCAACGCCTTGATACGCTGGACATCATTTTTTTCGTCTTCCAGTTTCTTCAGGAGACGTGTTTCCATCTCGGAAGCGGTCACCTGATTGATTTTTCCGGTCACCTCAAGCTTCGCGTCTTTTTGGAGACGCTCGACCGCCTGTTTCATCGTATCGCCGAAGTAACCGTCCTGTCCTTTCGGATCAAAACCGATCGCTTCAAGAACCAGGTGTGCGTTTTCGACAGGCTTGCCGTAATCGCCGCTTGCAAGCGTCTTATTATCCGTCAAAATCTTCGTGACGTTAAAGTAATCCGGCTGTTTGACTTCGACCGTCGGCTTGACGCCTTTTTTATGAATCCAGTTGCCGTCCGGTGTCAGCCATTTATTCGTCGTCAGCTTTAAATCACTGCCGTCTTTTAAATCATAAGCGCTTTGGACGATTCCTTTTCCGAACGATTTCGTCCCGACTACTTCGGCACCGGCGCCTTCTTTTAACCCGGCGGCCAGAATTTCCGAAGCCGAGGCCGATCCGCTGTCTTCGAGGACAACGAGCTTATAAGGTTTCTTCTCTTCCGCTTTCCCGAATTCCTGCGTCCGCTCCCCTTTGTTGTCTTCCACCTGGAAAATCGGTGTGTCTTTCGGGATGAACGGCGCAATCATTTGTGAAACAGCTGTCAGCAAGCCGCCCGGATTTCCCCGGACATCGATGACAAGACCATCAATGTTTTTCTCCTCGAGGGCTGCGAGTTGTTTCTCGAACTCTTTTGCCGTCGGATCCGAGAATTGTGTCACCTGCAGGACACCAATCGTCTTGCCGTTGACTTTTTCCGTCTTCGAATAGACGGTTTCAATCGGAATCGTATCGCGGACGATTGAAATCTTCATCGGATCCTGTCCGCCGCGTTGAATCATCAAGACGACTTTCGTCCCTTTTTCGCCGCGGATTTTCTTGACCGCTTGATCCGTTTTCTGTCCTTTTGTTGATTTACCGTCAATTTCTAAAATAATATCCCCCGGTTTGATACCGGCTTTTTCAGCGGGCGATCCCTTGATTGGTGAGACGATGACAATCGATTCGCCTTTTTGTTCGAGGGTCGCACCGATGCCTTCGAATGAAGACGACAAATTCGTGTTGAACGATGCCGTTTCCGATTCGTCCATGTAGACGGAATACGGATCGTCGAGGACTTCCGTCATTCCCGTCAGTGCCCCTTCGAGCAACTCCTGATCCGTCACGTCCTCGAGATAATTTTGGGAAATCATCTGTCTGACCTGATCAATTTTTTTCCAATCTCCCGTTGCGTTAGACGAAGAACTCGTCGCCACTGAATCCGTTCCACCTGCCGCTAACATCCCGACAGCCCCTGCTCCAAGACCCAAACCAAACGTACTGACCGCTATGACGGCCGTTGTCGATTTTTTCACGCGTAATTCCTCGTTTCTGGTGTAAACCTGCTATTTTTTTCAGTATAGCAAAAAAAGATAGGTTACCCTATCTTTTCGTCAGTCGCTCGTTGAAGTTATAAGATGTACGGTGCCGGATCAACCGCATTTGGTTGTCCGACGGCCCACTCACCGCGATGGATCTCAAAGTGGAGATGCGGCCCTGTCGACCAGCCGGTTGAACCGAGTTTGCCGACGATATCCCCCGGCATGACCGTTTGTCCCGCCTTGACCGAAACCGAATCGAGATGACCGTAAACCGTCGTCCAGACTTTCCCGTCAATCAGGTGTGTAATCATGACGACATTTCCATAGCCGGTCGCACTGCCGGCCCGGAGGACAATCCCGCCGGCCGCTGCTTTAATCGGGGTTCCTTTGGCATTAACGAGATCCAGTCCGGTATGCCGTTCCGACTTCCCGGTCAACGGGTTGTTGCGGGGACCGAACGGGGACGAGACATAACCTGTGACAGGCAACAGGAAAGGCTTTACGATTGCGCCCGGTTCCGATGTCTCCGGTTGGGCAGAAGGTGTTTCCGTCACCGGTTCCGAAGCCGTCGGTGGACGGGACGCTGGTTGATTTTGTTCTTGCTGTTCTTTTTCTGCTTTTGCTTTCTGCTCTGCCTGCCGCTCGGCTTCTGCAGCCGCCTCCGCTTCCCGGGCAGCGGCTGCTCTTTGCGCCGCTTCGGCACGTTCTTTTGCTTCCTGTTGCGCCCGTAGTTCGGCCGCACGCAACTCTTCCAACTGACGGCTGATCAGACGTTGCTGGTCTTCAAGGATCGCCGCTTCTTCCGCTTTCGTGAACTGTTCCTGTTGCAACTGTTCGACCTGACTGTTCAACCGGACGACCAACGTCCGTTTGACTTCTGATTCCGCGATGATCCGGGTCTGCAAAATCAACAGCTTCCGCTGCTCTTTTTTTAATTGTCCGAGTACGAGTTCCTGCTCGGACCGTTGTTCGGTTAACTGTTTGACGTTCGCCTGGTACGTCTGCAGGACACCGTCGTCCTGCTTGATGATTTCGCTGACAGTACTGAAACGCGAAATCAAATCTCCGAAATCCTTGGCATCGAGCAATACTTCGATGTATTTGACATCCCCATCCCGTTGGACGGACCGCAACCGGTCCCCGATCAATTTTTCCTGTGTCCGGAGTTTCGATTCCGTTTGACTGACGGCCCGGGTGACGATCGCCAGTTCTTCTTTGGCAACAGAAACAGCCGCCTGTTGATCCGCAATTTTACTCGCTAAATCTTCCAGACGGCTGTTGACTTCATCCAGGCGCGCTTTTGCTTCCTTGCGCTCCTGTTTCGTCAAGACTAACTTCTCCGATGTCTGATTCTGCGATTGTTCCGTCTCTTGCAGACGGGACTCGACCTCCTGTTGTTCCTTCAACAAATCTTCCTTGGACGTTGCCTGAACGGATACACTTGAACCAATTAATGCCAAGCTTAGGACGGTAGAACAGAATCGGACCTTCATGAGAAGCATCTCTCCTCTATCTTTTATTTGATTTTCAGAATTTAAATCTTCAAGAAACGGCCAAGTGACGTCGTTGATCCCCAGACACCGATGAAGGCACCGAGTGCGAGCAGAATGACAGACACTTGAATCGACAGTTCACCCGGTGGAATCAAGGTGAAAATTGAGGCATTCAATGATACGAGTTGTGGTTGCAATGCATTGTACGTCACTTCGTATCCGAAGTAGACGACAGCAATCGGAATCAGTGCCCCGAGTACCCCCATCAGCAGTCCTTCGATGAAGAACGGTGCACGGATGAAGCCGTTTTTTGCACCAACGAGTCGCATGATTTCAATCTCACGGCGACGTGAGAAAATCGTGACCTTGATCGTATTCGAAATGAGGAACATCGCCATGAATGTCAAACCGACAATCAGGATGATTCCGCCGATCCGAACCCCTTCAAGGAAGTTGAACATCTTCTCAACATAATCTTCGCCATATTCAACACTATCTATATTTTCCATTTTTTTGACGGTATTTGCAATAGTTTCTGTCTCATTTGGTGAAGTTGCCTTGACGATATACCGGTCGTGGAGCGGATTATCCTTCTCAACCGACTGGTAGGCCTGTGATCCTTCGCCAAGCTGTTCCTTGAAGCGGTCCAGTTCTTCTTCTTTTGAGCTGTAACGAACAGATTCAACACCCGGCATCTGTTCTAGTTTTTTTCCAACTGCATCGATTTTTGCCTGATCGGACTCTCGTTCGACGAACACTTGAATTTCGACGTCTTTTTCGACGTTATCGGAAATCTTGTTGACGTTGAACATGACCATCGCAAAAATCCCGACGAGTAATAAGGTCACGGTAACGGCACTGACGGAAGCGAATGTCATCCAGCCGTTTCGGACGAGACCTTTTGCCCCTTCCCGTAAATGACGGAATCCATTAAACTTCATAGCCGTACATTCCTTTCTCTTCGTCTCGGACGATTTTTCCACCGTCAATTGCGAGGACGCGATGACGCATCTTATTGACGATATCTCGGTTGTGGGTCGCCATTACGACCGTTGTCCCACGGCGATAAATCTCTTCAAATACTTCCATGATCTCCCATGCTGTATCCGGGTCAAGGTTTCCTGTCGGCTCATCGGCGATGACAAGTGACGGACGATTGACAATGGCTCTCGCAATCGAGATCCGTTGCTGTTCTCCACCGGATAATTCATCAGGATAGTTCCGTTCCTTGTGCTTCAACTTCACGAGATCGAGTACTTCAAGTACTTTCTTGCGGATCTGAGATTTGTCTTCACCGACAACTTCAAGGGCGAACGCGACGTTTTCATAAACCGTCAAGGACGGGAGTAGTTTAAAGTCTTGGAAGATGACGCCGATTTGGCGACGAAGTTCGGGGATTTGGCGGTTTTTCAACTTACCTACTTCAATTCCTTTAAATAAAAACGAACCGCTTGTCGGACGTTCTTCGCGATACATCATTTTCATGAATGTCGATTTCCCGGCTCCGGATGGACCAACGATATAGACGAATTCGCCTTGGTTGATCGTCAAATTGACTTCACGAAGTGCCGTGACACCGTTCGGATAAATTTTGCTGACTTGTTGCATCTTGATCACTTGCTTCACATCCTTACTTGATTACTGATGCTGATCAGATAGGTCTTAACGCCTACCGACCCCCATTATAACAGGCAACAATTTTTAAGCACATTACAATCAAATGTCATTTCCGGCTGATTTACATAAAAAAAGGGAGCCGGACAGCGAACATTTGTCATGTTCGTCATCTCTAGCCCCATACTATCACATAATTATTTTTTGTCAGCTAACCAATCCGCAACGGCGACGATTTCTTTGTCGTCTTTCAGGATACCGGCTGGCATTTGCCCTTTACCGTTTTTGATGATTTTTTGAATTTCTTCCGAAGAATATTTCGCTCCGACTTTCGTCAAGTTCGGTCCGACATTTCCCTCGAGATTATTCCCGTGACACGAAGCACAGTTGTTGGCGAAGATTTTTTCAGCGTCGACGGCTGTATTTGTTTTTGACGAATCATCGCTCATCGTCGATTCGTCCTTCGATGTATCCGATGAACTCGAATCATCACTGCCACATGCACCGAGTACAAGTGTCGCACCGAGTCCGGCTGCGAGTAAAAGGTTTTTCAATTTCATTCTTATTCCCCCTTAGTTAAGTACAAAACGACATCGTTATCTACTAGAGTATAACCGTTATCAGTACTTTCTAAGCGTGATTTCACAAAAATTTCACTCTTTCCAAACGTTTACGGCACATTCCGGTAACGTTTGTCGTCCGAGAAACCGAGCCCGAGCACTTCGTGGGCCTCGCTGACGACCAGAAAAGCGTTCGGATCGATATGTTTGACGATTTCTTTAAGCGTCGTGATTTCCCCCTGACGGACGACGACCATCAGCATCGGTTTGCGCGTCCGGGTAAACGCACCGGCGGCTTCAATTTCTGTCGCTCCCCGGTCGAGCGTCTGGAAAATCTCTTTGACGAGCGCTTCCCGTTGATCGGAGATGATGTAGGCCAGCTTATCGTTCGTGATACCAAGTTGCACGACATCAATCATCTTGATCGTAATGAACAAGGCGACGAGGGCATACAACCCAATCTCAAGCGAAAAGATGATGGCGGCACTGATGACGATCGTCCCGTCGAGCAAGGCGATACAGAAATGGAGCGGGATTTTCGTGAAGCGATGCAGAATCTGGGCAATCAGATCCATCCCGCCGGTCGAGGCACGGGCTTTAAAAATCAAACCGAGACCAATCCCGACGCCGGCTCCGCCGAAAATCGCAGCAAGCATCGGATTCATCGTCGCTGCCGGCACCTCGAACCGTTCATAAACCAGGATGACGACCGGTAAAAAGATTGAGCCGACGAGCGATTTGACGCCGAAGCCCATCCCGAGAATCATCCAGCCGATCGCCAGCAAAACGATATTGGCAATCAGCTGAAACAAGCCCGGTGAAATTCCGAACAGATCGTTTAAGACGATCGACAGACCGCTGACGCCTCCGGAGGCCAACTGGTTCGGTGCCAAAAATAAACTGAAGGCACTAGCGACAAAGACGGAACCGAGTAATAAATACACATAGTCGCGGACGACTTCCTGACGTGTTGATGTCATAACGTTACATTTCCCCTTATATAAGTTCTACAACCCGTTTTTCATTTTAGCGGAAAAACAGAGGAGCGACTAGAAGGGCTGAGCAACTCGCAGTGGTTCTCTTATACCGCACTAAAGGGTTTCGAGTACCGGACTGTTCCGGCAATCCCTTTTAACGCCTGCCGTTCGAGCGGCATGACCAGAAAGACGTCCATCGGGACCGGGAATGGTGCTTCGATGCCATAATCGACAGCCCGCTCGAATCCGAACTGCGGATAATAACTGTCATGCCCAAGGACGACGATATGTGACTCGCCGGCTTCCCGGGCATCTTCAATCACTTGGCGGATCAGTTCCGAGCCGATGCCTTTGCGTTGCCAGTGTGGTTTGACACCGACCGGCGCGAGTGCGAGCGACGGAATGTCTTCGATGTAAATCCGGCTGAGTAAGACATGCCCAACAATCTCGCCCTTGTCCGTTACAGCGACGCGGCTGTAATGCGGGAGCGACGCCTCATCTTCCCGTAACGCTTCGACCAGATCGGCTTCCGTCCGCTGTCCAAACGCGGCTTGATGGACGAGCCGAATTCCGGCCGCGTCTTTGAATATTTCTGTACGAATCTGCATCTGTTTCGCTCCTTCAATCGAATTGGTAGAAAAAAACCGCCGACACAAAGGCCGACGGGATATCCACTTACATATTCATTAAGCGCAGGTACGCATCGATGAAGCCCATGATGTCCCCATCCATCGCGCCTTGCGTATTCCCGACTTCGTAGTTCGTCCGGTGATCCTTAACCATGCTGTATGGGTGGAAGACGTATGAACGAATCTGACTGCCCCAGGCGATATCTGATTTTTCACCACGGATTTCGTCGAGTTTCTTTTGTTTTTCTTCGATTTCACGTTGATAAAGTTTTGCTTTCAACATCTTCATTGCCGCTTCACGGTTCTTGATTTGCGACCGTTCCTGCTGACATGAAACGACGACACCTGTCGGAACGTGCGTAATCCGAACAGCAGAGTCCGTCGTATTGATGTGCTGTCCACCGGCACCGGATGCCCGGTACGTATCGACACGCAAGTCTTCTGTCCGGATCTCGATATCGATATCATCGTTGAATTCCGGCATGACGTCACACGACACGAACGACGTATGGCGACGGCCTGACGAGTCGAACGGAGAAATCCGCACGAGACGGTGAATCCCTTTTTCCGCTTTCAAATACCCATAGGCGTTGTGCCCCTGGATCCGGAGCGTGACCGATTTCACACCGGCTTCGTCACCCGGCTGATAGTCCATCGTTTCGACTTTCCAGCCCTGCTTGTCGCAGAAACGTTGATACATCCGTAACAACATCGACGCCCAGTCCTGTGACTCGGTTCCGCCGGCGCCCGGGTGCAATTCGAGAATCGCGTTGTTGGCATCGTATTCGCCGTTCAATAAGATTTGAAGTTCGAACTCATCAAATTTCTTTTTGATGTCGCCGAGTTCCGACTCCAGTTCTTCCTGAAGTTCAACGTCCGGCTCTTCTTTAATCAATTCGTACGTTAAAACGATGTTTTCGTGACCGTCCGCGAGGTGCTGGTATTTATCGACCATCGCTTTCAGACCGTTTGATTCGTCGATGACTTTTTGAGCCGACTCCTGATTGTTCCAGAAGTCCGGGTACGTCATCTCGTTTTCAAGCTCCTCGATGCGTGAGATCTTCGTCTCGAGATCGAGTGATGCCTTGTATTCATCGAGTTTCTTTTCCATCCACTCGGCGGTATTGCGTATTTCTGCTAATTCCAT
Protein sequences of DBSCAN-SWA_2 >NC_010556|2379679:2387527|2383530_2384217_-|WP_012371287.1|DBSCAN-SWA MIKMQQVSKIYPNGVTALREVNLTINQGEFVYIVGPSGAGKSTFMKMMYREERPTSGSFLFKGIEVGKLKNRQIPELRRQIGVIFQDFKLLPSLTVYENVAFALEVVGEDKSQIRKKVLEVLDLVKLKHKERNYPDELSGGEQQRISIARAIVNRPSLVIADEPTGNLDPDTAWEIMEVFEEIYRRGTTVVMATHNRDIVNKMRHRVLAIDGGKIVRDEEKGMYGYEV >NC_010556|2379679:2387527|2379679_2381101_-|WP_012371284.1|DBSCAN-SWA MKKSTTAVIAVSTFGLGLGAGAVGMLAAGGTDSVATSSSSNATGDWKKIDQVRQMISQNYLEDVTDQELLEGALTGMTEVLDDPYSVYMDESETASFNTNLSSSFEGIGATLEQKGESIVIVSPIKGSPAEKAGIKPGDIILEIDGKSTKGQKTDQAVKKIRGEKGTKVVLMIQRGGQDPMKISIVRDTIPIETVYSKTEKVNGKTIGVLQVTQFSDPTAKEFEKQLAALEEKNIDGLVIDVRGNPGGLLTAVSQMIAPFIPKDTPIFQVEDNKGERTQEFGKAEEKKPYKLVVLEDSGSASASEILAAGLKEGAGAEVVGTKSFGKGIVQSAYDLKDGSDLKLTTNKWLTPDGNWIHKKGVKPTVEVKQPDYFNVTKILTDNKTLASGDYGKPVENAHLVLEAIGFDPKGQDGYFGDTMKQAVERLQKDAKLEVTGKINQVTASEMETRLLKKLEDEKNDVQRIKALEVAAQ >NC_010556|2379679:2387527|2384884_2385754_-|WP_012371289.1|DBSCAN-SWA MTSTRQEVVRDYVYLLLGSVFVASAFSLFLAPNQLASGGVSGLSIVLNDLFGISPGLFQLIANIVLLAIGWMILGMGFGVKSLVGSIFLPVVILVYERFEVPAATMNPMLAAIFGGAGVGIGLGLIFKARASTGGMDLIAQILHRFTKIPLHFCIALLDGTIVISAAIIFSLEIGLYALVALFITIKMIDVVQLGITNDKLAYIISDQREALVKEIFQTLDRGATEIEAAGAFTRTRKPMLMVVVRQGEITTLKEIVKHIDPNAFLVVSEAHEVLGLGFSDDKRYRNVP >NC_010556|2379679:2387527|2381196_2382600_-|WP_012371285.1|DBSCAN-SWA MKVRFCSTVLSLALIGSSVSVQATSKEDLLKEQQEVESRLQETEQSQNQTSEKLVLTKQERKEAKARLDEVNSRLEDLASKIADQQAAVSVAKEELAIVTRAVSQTESKLRTQEKLIGDRLRSVQRDGDVKYIEVLLDAKDFGDLISRFSTVSEIIKQDDGVLQTYQANVKQLTEQRSEQELVLGQLKKEQRKLLILQTRIIAESEVKRTLVVRLNSQVEQLQQEQFTKAEEAAILEDQQRLISRQLEELRAAELRAQQEAKERAEAAQRAAAAREAEAAAEAERQAEQKAKAEKEQQEQNQPASRPPTASEPVTETPSAQPETSEPGAIVKPFLLPVTGYVSSPFGPRNNPLTGKSERHTGLDLVNAKGTPIKAAAGGIVLRAGSATGYGNVVMITHLIDGKVWTTVYGHLDSVSVKAGQTVMPGDIVGKLGSTGWSTGPHLHFEIHRGEWAVGQPNAVDPAPYIL >NC_010556|2379679:2387527|2385855_2386359_-|WP_012371290.1|DBSCAN-SWA MQIRTEIFKDAAGIRLVHQAAFGQRTEADLVEALREDEASLPHYSRVAVTDKGEIVGHVLLSRIYIEDIPSLALAPVGVKPHWQRKGIGSELIRQVIEDAREAGESHIVVLGHDSYYPQFGFERAVDYGIEAPFPVPMDVFLVMPLERQALKGIAGTVRYSKPFSAV >NC_010556|2379679:2387527|2382641_2383541_-|WP_012371286.1|DBSCAN-SWA MKFNGFRHLREGAKGLVRNGWMTFASVSAVTVTLLLVGIFAMVMFNVNKISDNVEKDVEIQVFVERESDQAKIDAVGKKLEQMPGVESVRYSSKEEELDRFKEQLGEGSQAYQSVEKDNPLHDRYIVKATSPNETETIANTVKKMENIDSVEYGEDYVEKMFNFLEGVRIGGIILIVGLTFMAMFLISNTIKVTIFSRRREIEIMRLVGAKNGFIRAPFFIEGLLMGVLGALIPIAVVYFGYEVTYNALQPQLVSLNASIFTLIPPGELSIQVSVILLALGAFIGVWGSTTSLGRFLKI >NC_010556|2379679:2387527|2386426_2387527_-|WP_012371291.1|DBSCAN-SWA MELAEIRNTAEWMEKKLDEYKASLDLETKISRIEELENEMTYPDFWNNQESAQKVIDESNGLKAMVDKYQHLADGHENIVLTYELIKEEPDVELQEELESELGDIKKKFDEFELQILLNGEYDANNAILELHPGAGGTESQDWASMLLRMYQRFCDKQGWKVETMDYQPGDEAGVKSVTLRIQGHNAYGYLKAEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFNDDIDIEIRTEDLRVDTYRASGAGGQHINTTDSAVRITHVPTGVVVSCQQERSQIKNREAAMKMLKAKLYQREIEEKQKKLDEIRGEKSDIAWGSQIRSYVFHPYSMVKDHRTNYEVGNTQGAMDGDIMGFIDAYLRLMNM >NC_010556|2379679:2387527|2384411_2384768_-|WP_041262018.1|DBSCAN-SWA MKNLLLAAGLGATLVLGACGSDDSSSSDTSKDESTMSDDSSKTNTAVDAEKIFANNCASCHGNNLEGNVGPNLTKVGAKYSSEEIQKIIKNGKGQMPAGILKDDKEIVAVADWLADKK |
8 | Moraxella_phage(16.67%) | NA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
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