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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_010634 Yersinia pseudotuberculosis PB1/+, complete genome 10 crisprs DEDDh,csa3,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1 0 9 5 0
NC_010635 Yersinia pseudotuberculosis PB1/+ plasmid pYPTS01, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NC_010634
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010634_1 117776-117888 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010634_2 360177-360275 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010634_3 1266873-1266956 Orphan I-F
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010634_4 1766284-1766405 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010634_5 1890510-1891261 Orphan I-F
12 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010634_6 2882840-2883348 TypeI-F I-F
8 spacers
cas1,cas3f,cas8f,cas5f,cas7f,cas6f

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010634_7 3075109-3075220 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010634_8 3157781-3157877 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010634_9 3967730-3967809 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010634_10 4644075-4644165 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_010634_3 3.1|1266897|36|NC_010634|CRISPRCasFinder 1266897-1266932 36 NZ_CP028488 Yersinia massiliensis strain GTA plasmid unnamed1, complete sequence 94279-94314 4 0.889
NC_010634_3 3.1|1266897|36|NC_010634|CRISPRCasFinder 1266897-1266932 36 NZ_CP054046 Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence 5758-5793 6 0.833
NC_010634_3 3.1|1266897|36|NC_010634|CRISPRCasFinder 1266897-1266932 36 NZ_CP032488 Yersinia hibernica strain CFS1934 plasmid pCFS1934, complete sequence 55932-55967 6 0.833
NC_010634_3 3.1|1266897|36|NC_010634|CRISPRCasFinder 1266897-1266932 36 NZ_CP032236 Yersinia ruckeri strain NHV_3758 plasmid pYR4, complete sequence 10438-10473 6 0.833
NC_010634_3 3.1|1266897|36|NC_010634|CRISPRCasFinder 1266897-1266932 36 NZ_CP025802 Yersinia ruckeri strain SC09 plasmid pLT, complete sequence 50213-50248 6 0.833
NC_010634_3 3.1|1266897|36|NC_010634|CRISPRCasFinder 1266897-1266932 36 NZ_CP054047 Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence 45314-45349 6 0.833
NC_010634_3 3.1|1266897|36|NC_010634|CRISPRCasFinder 1266897-1266932 36 NZ_LN681230 Yersinia ruckeri strain CSF007-82 plasmid pYR3, complete sequence 40349-40384 6 0.833
NC_010634_5 5.9|1891021|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1891021-1891052 32 NZ_CP037433 Lactobacillus plantarum strain EM plasmid pEM4, complete sequence 16919-16950 6 0.812
NC_010634_5 5.9|1891021|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1891021-1891052 32 NZ_CP037433 Lactobacillus plantarum strain EM plasmid pEM4, complete sequence 35450-35481 6 0.812
NC_010634_6 6.5|2883108|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR 2883108-2883139 32 AP018277 Calothrix sp. NIES-4101 plasmid plasmid4 DNA, complete genome 76706-76737 6 0.812
NC_010634_5 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1890899-1890930 32 NZ_CP018742 Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence 160965-160996 7 0.781
NC_010634_5 5.9|1891021|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1891021-1891052 32 NZ_CP009710 Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_2, complete sequence 14677-14708 7 0.781
NC_010634_5 5.9|1891021|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1891021-1891052 32 NC_006154 Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953, complete sequence 7733-7764 7 0.781
NC_010634_5 5.11|1891142|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1891142-1891173 32 NC_011368 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence 270051-270082 7 0.781
NC_010634_5 5.11|1891142|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1891142-1891173 32 NC_020062 Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence 1676974-1677005 7 0.781
NC_010634_6 6.5|2883108|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR 2883108-2883139 32 NC_014534 Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence 199240-199271 7 0.781
NC_010634_2 2.1|360210|33|NC_010634|CRISPRCasFinder 360210-360242 33 NZ_KX274135 Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence 60674-60706 8 0.758
NC_010634_6 6.3|2882988|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR 2882988-2883019 32 GU071097 Synechococcus phage S-SSM5, complete genome 125694-125725 8 0.75
NC_010634_5 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1890899-1890930 32 NZ_CP028373 Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence 40985-41016 9 0.719
NC_010634_5 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1890899-1890930 32 NZ_CP018901 Campylobacter coli strain YH502 plasmid pCOS502, complete sequence 49228-49259 9 0.719
NC_010634_5 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1890899-1890930 32 NZ_CP014345 Campylobacter jejuni strain RM3194 plasmid unnamed, complete sequence 19288-19319 9 0.719
NC_010634_5 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1890899-1890930 32 NZ_CP048772 Campylobacter jejuni strain ZS007 plasmid pCJ145K, complete sequence 31830-31861 9 0.719
NC_010634_5 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT 1890899-1890930 32 AP013580 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C16-MedDCM-OCT-S43-C44, *** SEQUENCING IN PROGRESS *** 16672-16703 9 0.719
NC_010634_6 6.2|2882928|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR 2882928-2882959 32 NZ_CP032703 Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence 47746-47777 9 0.719
NC_010634_6 6.3|2882988|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR 2882988-2883019 32 NZ_CP020003 Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed1, complete sequence 39669-39700 9 0.719
NC_010634_6 6.3|2882988|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR 2882988-2883019 32 MK905543 Vibrio phage USC-1, complete genome 129260-129291 9 0.719
NC_010634_6 6.3|2882988|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR 2882988-2883019 32 MK358448 Vibrio phage 5, complete genome 135485-135516 9 0.719
NC_010634_6 6.8|2883289|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR 2883289-2883320 32 NZ_CP013635 Rhizobium sp. N324 plasmid pRspN324e, complete sequence 243008-243039 9 0.719
NC_010634_6 6.8|2883289|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR 2883289-2883320 32 NC_011368 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence 1123208-1123239 9 0.719
NC_010634_6 6.8|2883289|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR 2883289-2883320 32 NZ_CP035000 Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence 125050-125081 9 0.719

1. spacer 3.1|1266897|36|NC_010634|CRISPRCasFinder matches to NZ_CP028488 (Yersinia massiliensis strain GTA plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.889

gaaaaagccaacgacggatctcttcaacggcaatgc	CRISPR spacer
ggccaagccaatgacggatctcttcaacggcaatgc	Protospacer
*.  *******.************************

2. spacer 3.1|1266897|36|NC_010634|CRISPRCasFinder matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.833

gaaaaagccaacgacggatctcttcaacggcaatgc	CRISPR spacer
ggcccagccaatggcggatctcttcaacggcaatgc	Protospacer
*.   ******.*.**********************

3. spacer 3.1|1266897|36|NC_010634|CRISPRCasFinder matches to NZ_CP032488 (Yersinia hibernica strain CFS1934 plasmid pCFS1934, complete sequence) position: , mismatch: 6, identity: 0.833

gaaaaagccaacgacggatctcttcaacggcaatgc	CRISPR spacer
ggcccagccaatggcggatctcttcaacggcaatgc	Protospacer
*.   ******.*.**********************

4. spacer 3.1|1266897|36|NC_010634|CRISPRCasFinder matches to NZ_CP032236 (Yersinia ruckeri strain NHV_3758 plasmid pYR4, complete sequence) position: , mismatch: 6, identity: 0.833

gaaaaagccaacgacggatctcttcaacggcaatgc	CRISPR spacer
ggccaagccaatgacggatctcttcaacggcgatcc	Protospacer
*.  *******.*******************.** *

5. spacer 3.1|1266897|36|NC_010634|CRISPRCasFinder matches to NZ_CP025802 (Yersinia ruckeri strain SC09 plasmid pLT, complete sequence) position: , mismatch: 6, identity: 0.833

gaaaaagccaacgacggatctcttcaacggcaatgc	CRISPR spacer
ggccaagccaatgacggatctcttcaacggcgatcc	Protospacer
*.  *******.*******************.** *

6. spacer 3.1|1266897|36|NC_010634|CRISPRCasFinder matches to NZ_CP054047 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.833

gaaaaagccaacgacggatctcttcaacggcaatgc	CRISPR spacer
ggccaagccaatgacggatctcttcaacagcaatac	Protospacer
*.  *******.****************.*****.*

7. spacer 3.1|1266897|36|NC_010634|CRISPRCasFinder matches to NZ_LN681230 (Yersinia ruckeri strain CSF007-82 plasmid pYR3, complete sequence) position: , mismatch: 6, identity: 0.833

gaaaaagccaacgacggatctcttcaacggcaatgc	CRISPR spacer
ggccaagccaatgacggatctcttcaacggcgatcc	Protospacer
*.  *******.*******************.** *

8. spacer 5.9|1891021|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037433 (Lactobacillus plantarum strain EM plasmid pEM4, complete sequence) position: , mismatch: 6, identity: 0.812

aacaacgccgcagacgcaaccag---tgccaatac	CRISPR spacer
aagaacgccgcatacgcaaccagaattgcaaa---	Protospacer
** ********* **********   *** **   

9. spacer 5.9|1891021|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037433 (Lactobacillus plantarum strain EM plasmid pEM4, complete sequence) position: , mismatch: 6, identity: 0.812

aacaacgccgcagacgcaaccag---tgccaatac	CRISPR spacer
aagaacgccgcatacgcaaccagaattgcaaa---	Protospacer
** ********* **********   *** **   

10. spacer 6.5|2883108|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR matches to AP018277 (Calothrix sp. NIES-4101 plasmid plasmid4 DNA, complete genome) position: , mismatch: 6, identity: 0.812

tactgct--cagatatttggcgtgtcttttcttg	CRISPR spacer
--ctgctggcagatatttgccgtgtattttctgc	Protospacer
  *****  ********** ***** ******  

11. spacer 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 7, identity: 0.781

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
ttttttaaacatatttaaatcaatagctgcat	Protospacer
 *.****************** ** ***.  *

12. spacer 5.9|1891021|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009710 (Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_2, complete sequence) position: , mismatch: 7, identity: 0.781

aacaacgccgcagacgcaaccagtgccaatac	CRISPR spacer
gccgcagacgcagacgcaaccagtgctaatac	Protospacer
. *.  * ******************.*****

13. spacer 5.9|1891021|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NC_006154 (Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953, complete sequence) position: , mismatch: 7, identity: 0.781

aacaacgccgcagacgcaaccagtgccaatac	CRISPR spacer
gccgcagacgcagacgcaaccagtgctaatac	Protospacer
. *.  * ******************.*****

14. spacer 5.11|1891142|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 7, identity: 0.781

tcaaaaacctgatggcagtggcccggcaatat	CRISPR spacer
tcggcttcctgatggcagtcgccaggcaatat	Protospacer
**..   ************ *** ********

15. spacer 5.11|1891142|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 7, identity: 0.781

tcaaaaacctgatggcagtggcccggcaatat	CRISPR spacer
tcggtttcctgatggcggtggcccggcagtat	Protospacer
**..   *********.***********.***

16. spacer 6.5|2883108|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR matches to NC_014534 (Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence) position: , mismatch: 7, identity: 0.781

tactgctcagatatttggcgtgtcttttcttg	CRISPR spacer
taaacctcagatatttggccagtcttttaatg	Protospacer
**   **************  *******  **

17. spacer 2.1|360210|33|NC_010634|CRISPRCasFinder matches to NZ_KX274135 (Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence) position: , mismatch: 8, identity: 0.758

attacgcgttttactgataaccccatgccaaag	CRISPR spacer
aaaaatcgttttgctgataacctcatgccattg	Protospacer
*  *  ******.*********.*******  *

18. spacer 6.3|2882988|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR matches to GU071097 (Synechococcus phage S-SSM5, complete genome) position: , mismatch: 8, identity: 0.75

cgcatttg-ctcaacttctttattagcattagc	CRISPR spacer
-gtagtaacctcaacttctttatctgcattaga	Protospacer
 *.* * . **************. ******* 

19. spacer 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028373 (Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
aaacaaacacttatctaaatctattgctaatg	Protospacer
*  .  * ** ***.**************** 

20. spacer 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018901 (Campylobacter coli strain YH502 plasmid pCOS502, complete sequence) position: , mismatch: 9, identity: 0.719

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
aaacaaacacttatctaaatctattgctaatg	Protospacer
*  .  * ** ***.**************** 

21. spacer 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014345 (Campylobacter jejuni strain RM3194 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
aaacaaacacttatctaaatctattgctaatg	Protospacer
*  .  * ** ***.**************** 

22. spacer 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048772 (Campylobacter jejuni strain ZS007 plasmid pCJ145K, complete sequence) position: , mismatch: 9, identity: 0.719

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
aaacaaacacttatctaaatctattgctaatg	Protospacer
*  .  * ** ***.**************** 

23. spacer 5.7|1890899|32|NC_010634|PILER-CR,CRISPRCasFinder,CRT matches to AP013580 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C16-MedDCM-OCT-S43-C44, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

atctttaaacatatttaaatctattgctaatt	CRISPR spacer
tccaattaaaataattaaatctattgctaaaa	Protospacer
 .*  * ** *** ****************  

24. spacer 6.2|2882928|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032703 (Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagagtgttttttctgacgatgttccttgctg	CRISPR spacer
cagagtgttttttctgccgacgttctgctttc	Protospacer
.*************** ***.****. . .* 

25. spacer 6.3|2882988|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020003 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcatttgctcaacttctttattagcattagc	CRISPR spacer
ccttctttctcaacatctttattagcatttaa	Protospacer
* . .** ****** ************** . 

26. spacer 6.3|2882988|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR matches to MK905543 (Vibrio phage USC-1, complete genome) position: , mismatch: 9, identity: 0.719

cgcatttgctcaacttctttattagcattagc	CRISPR spacer
aaaacgtaatcaacttctttcttaccattagc	Protospacer
 . *. *. *********** *** *******

27. spacer 6.3|2882988|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR matches to MK358448 (Vibrio phage 5, complete genome) position: , mismatch: 9, identity: 0.719

cgcatttgctcaacttctttattagcattagc	CRISPR spacer
aaaacgtaatcaacttctttcttaccattagc	Protospacer
 . *. *. *********** *** *******

28. spacer 6.8|2883289|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013635 (Rhizobium sp. N324 plasmid pRspN324e, complete sequence) position: , mismatch: 9, identity: 0.719

aagagccgccttcttgtcttccgcgcgttgtt	CRISPR spacer
taacgaagccatcttttcttccgcgcgttgac	Protospacer
 *. *  *** **** ************** .

29. spacer 6.8|2883289|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 9, identity: 0.719

aagagccgccttcttgtcttccgcgcgttgtt	CRISPR spacer
taacgaagccatcttttcttccgcgcgttgac	Protospacer
 *. *  *** **** ************** .

30. spacer 6.8|2883289|32|NC_010634|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035000 (Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence) position: , mismatch: 9, identity: 0.719

aagagccgccttcttgtcttccgcgcgttgtt	CRISPR spacer
taacgaagccatcttttcttccgcgcgttgac	Protospacer
 *. *  *** **** ************** .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1491159 : 1535506 37 Pseudomonas_phage(25.0%) tail,protease,plate NA
DBSCAN-SWA_2 1741432 : 1808087 55 uncultured_Caudovirales_phage(25.0%) protease,transposase,plate NA
DBSCAN-SWA_3 2100716 : 2153437 65 Salmonella_phage(39.47%) head,portal,transposase,plate,lysis,holin,integrase,tail,capsid attL 2114194:2114208|attR 2140110:2140124
DBSCAN-SWA_4 3597009 : 3684117 83 Cronobacter_phage(40.54%) head,portal,protease,terminase,tRNA,integrase,holin,tail,capsid attL 3608040:3608055|attR 3661328:3661343
DBSCAN-SWA_5 3967812 : 4000207 37 Cronobacter_phage(78.57%) head,portal,terminase,tRNA,holin,tail,capsid NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_010635
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 21878 : 51736 28 Enterobacteria_phage(50.0%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage