Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_010815 Geobacter lovleyi SZ plasmid pGLOV01, complete sequence 0 crisprs NA 0 0 1 0
NC_010814 Geobacter lovleyi SZ, complete sequence 1 crisprs DEDDh,WYL,csa3,cas3,RT,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,Cas9_archaeal,PD-DExK,DinG 0 21 9 0

Results visualization

1. NC_010814
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010814_1 2638386-2641465 TypeI-E I-E
50 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_010814_1 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT 2640185-2640216 32 KY554775 Lactococcus phage AM11, complete genome 19664-19695 5 0.844
NC_010814_1 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT 2640185-2640216 32 KY554773 Lactococcus phage AM8, complete genome 19663-19694 5 0.844
NC_010814_1 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT 2640185-2640216 32 KY554768 Lactococcus phage AM1, complete genome 19663-19694 5 0.844
NC_010814_1 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT 2640185-2640216 32 KY554769 Lactococcus phage AM2, complete genome 19663-19694 5 0.844
NC_010814_1 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT 2640185-2640216 32 KY554770 Lactococcus phage AM3, complete genome 19665-19696 5 0.844
NC_010814_1 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT 2640185-2640216 32 KY554776 Lactococcus phage AM12, complete genome 19645-19676 5 0.844
NC_010814_1 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT 2640185-2640216 32 KY554774 Lactococcus phage AM9, complete genome 19663-19694 5 0.844
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 NZ_KT033469 Aeromonas salmonicida subsp. salmonicida strain 01-B522 plasmid pAsa4b, complete sequence 65113-65144 6 0.812
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 NZ_KT033470 Aeromonas salmonicida subsp. salmonicida strain JF2267 plasmid pAsa4c, complete sequence 46029-46060 6 0.812
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 NC_009349 Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete sequence 143393-143424 6 0.812
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 NZ_CP022176 Aeromonas salmonicida strain S44 plasmid pS44-1, complete sequence 44925-44956 6 0.812
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 JX173487 Pseudomonas phage Phi-S1, complete genome 31799-31830 6 0.812
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 MH179478 Pseudomonas phage 67PfluR64PP, complete genome 8584-8615 6 0.812
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 MT094431 Pseudomonas phage BIM BV-46, complete genome 30349-30380 6 0.812
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 MH179475 Pseudomonas phage 71PfluR64PP, complete genome 31967-31998 6 0.812
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 MH179472 Pseudomonas phage 22PfluR64PP, complete genome 8661-8692 6 0.812
NC_010814_1 1.28|2640063|32|NC_010814|CRISPRCasFinder,CRT 2640063-2640094 32 NC_010333 Caulobacter sp. K31 plasmid pCAUL02, complete sequence 152744-152775 6 0.812
NC_010814_1 1.19|2639514|32|NC_010814|CRISPRCasFinder,CRT 2639514-2639545 32 NZ_MK757441 Alcaligenes faecalis strain AN70 plasmid pAN70-1, complete sequence 44871-44902 7 0.781
NC_010814_1 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT 2639636-2639667 32 MN694532 Marine virus AFVG_250M629, complete genome 21282-21313 7 0.781
NC_010814_1 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT 2639636-2639667 32 NZ_CP039703 Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence 168545-168576 7 0.781
NC_010814_1 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT 2639636-2639667 32 NZ_CP013238 Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence 276851-276882 7 0.781
NC_010814_1 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT 2639636-2639667 32 NZ_AP019717 Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence 563244-563275 7 0.781
NC_010814_1 1.26|2639941|32|NC_010814|CRISPRCasFinder,CRT 2639941-2639972 32 NZ_CP020716 Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence 25675-25706 7 0.781
NC_010814_1 1.38|2640673|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640673-2640704 32 NZ_CP010325 Pantoea sp. PSNIH1 plasmid pPSP-057, complete sequence 94010-94041 7 0.781
NC_010814_1 1.8|2638842|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638842-2638873 32 NC_014389 Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence 93952-93983 8 0.75
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 199481-199512 8 0.75
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 NZ_CP045368 Marinobacter sp. THAF39 plasmid phiTHAF39, complete sequence 35607-35638 8 0.75
NC_010814_1 1.17|2639392|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639392-2639423 32 NZ_CP029177 Acidibrevibacterium fodinaquatile strain G45-3 plasmid unnamed1, complete sequence 64727-64758 8 0.75
NC_010814_1 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT 2639636-2639667 32 NC_019526 Enterobacteria phage vB_KleM-RaK2, complete genome 297270-297301 8 0.75
NC_010814_1 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT 2639636-2639667 32 MT708547 Klebsiella phage Muenster, complete genome 72356-72387 8 0.75
NC_010814_1 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT 2639636-2639667 32 AB897757 Klebsiella phage K64-1 DNA, complete genome 297084-297115 8 0.75
NC_010814_1 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT 2639636-2639667 32 MK448733 Streptococcus phage Javan345, complete genome 4823-4854 8 0.75
NC_010814_1 1.35|2640490|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640490-2640521 32 NZ_CP014127 Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence 370938-370969 8 0.75
NC_010814_1 1.35|2640490|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640490-2640521 32 NZ_CP028350 Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence 323133-323164 8 0.75
NC_010814_1 1.35|2640490|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640490-2640521 32 NC_014258 Pantoea vagans C9-1 plasmid pPag3, complete sequence 247705-247736 8 0.75
NC_010814_1 1.3|2638537|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638537-2638568 32 MF063068 Pseudomonas phage Noxifer, complete genome 150491-150522 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_KT307967 Yersinia pseudotuberculosis strain IP2666 plasmid pYV2666, complete sequence 52408-52439 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_010157 Yersinia pestis Angola plasmid new_pCD, complete sequence 34871-34902 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_006153 Yersinia pseudotuberculosis IP 32953 plasmid pYV, complete sequence 54489-54520 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP030981 Yersinia enterocolitica subsp. palearctica strain Y1 plasmid pYV, complete sequence 15888-15919 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_005813 Yersinia pestis biovar Microtus str. 91001 plasmid pCD1, complete sequence 23612-23643 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 CP016946 Yersinia enterocolitica strain YE1 plasmid unnamed1, complete sequence 56930-56961 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009491 Yersinia pestis strain PBM19 plasmid pCD1, complete sequence 4908-4939 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_010635 Yersinia pseudotuberculosis PB1/+ plasmid pYPTS01, complete sequence 354-385 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009779 Yersinia pseudotuberculosis PB1/+ plasmid pYAB, complete sequence 48686-48717 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009711 Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_1, complete sequence 51153-51184 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009366 Yersinia enterocolitica strain WA plasmid unnamed, complete sequence 3320-3351 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009713 Yersinia pestis Pestoides F plasmid pCD, complete sequence 28255-28286 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009703 Yersinia pestis strain Harbin35 plasmid unnamed2, complete sequence 3046-3077 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009783 Yersinia pestis strain El Dorado plasmid pCD, complete sequence 23587-23618 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009721 Yersinia pestis strain Shasta plasmid pCD, complete sequence 68373-68404 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP045260 Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pCD, complete sequence 19902-19933 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP033695 Yersinia pestis strain FDAARGOS_602 plasmid unnamed2, complete sequence 49965-49996 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_009377 Yersinia pestis Pestoides F plasmid CD, complete sequence 23572-23603 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_014017 Yersinia pestis Z176003 plasmid pCD1, complete sequence 35274-35305 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_017263 Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pCD, complete sequence 35489-35520 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP033697 Yersinia pestis strain FDAARGOS_601 plasmid unnamed1, complete sequence 16882-16913 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP033712 Yersinia pseudotuberculosis strain FDAARGOS_581 plasmid unnamed, complete sequence 25217-25248 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP033714 Yersinia pseudotuberculosis strain FDAARGOS_580 plasmid unnamed, complete sequence 19690-19721 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP016936 Yersinia enterocolitica strain YE7 plasmid unnamed2, complete sequence 63696-63727 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP032567 Yersinia pseudotuberculosis strain IP2666pIB1 plasmid pIB1, complete sequence 52408-52439 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_005017 Yersinia enterocolitica 8081 plasmid pYVe8081, complete sequence 27570-27601 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP033708 Yersinia pseudotuberculosis strain FDAARGOS_583 plasmid unnamed, complete sequence 36561-36592 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP045147 Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pCD, complete sequence 21862-21893 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP045156 Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pCD, complete sequence 19902-19933 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP045160 Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pCD, complete sequence 21850-21881 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP006747 Yersinia pestis 8787 plasmid pCD1, complete sequence 9712-9743 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009972 Yersinia pestis CO92 plasmid unnamed, complete sequence 39581-39612 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_003131 Yersinia pestis CO92 plasmid pCD1, complete sequence 37232-37263 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP045151 Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pCD, complete sequence 19902-19933 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP006791 Yersinia pestis 2944 plasmid pCD, complete sequence 45165-45196 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP006750 Yersinia pestis 3770 plasmid pCD1, complete sequence 44079-44110 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP006757 Yersinia pestis 1522 plasmid pCD, complete sequence 36681-36712 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_LT596222 Yersinia pseudotuberculosis isolate NZYP4713 plasmid 2 19695-19726 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP033710 Yersinia pseudotuberculosis strain FDAARGOS_582 plasmid unnamed, complete sequence 23360-23391 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_017157 Yersinia pestis D182038 plasmid pCD1, complete sequence 36597-36628 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_017153 Yersinia pestis D106004 plasmid pCD1, complete sequence 35273-35304 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP016943 Yersinia enterocolitica strain YE3 plasmid unnamed2, complete sequence 56784-56815 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP033716 Yersinia pseudotuberculosis strain FDAARGOS_579 plasmid unnamed, complete sequence 50906-50937 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_002120 Yersinia enterocolitica W22703 plasmid pYVe227, complete sequence 33175-33206 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_004839 Yersinia pestis strain KIM5 plasmid pCD1, complete sequence 23571-23602 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP016939 Yersinia enterocolitica strain YE5 plasmid unnamed1, complete sequence 56934-56965 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP016933 Yersinia enterocolitica strain YE165 plasmid unnamed2, complete sequence 57174-57205 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP033689 Yersinia pestis strain FDAARGOS_603 plasmid unnamed1, complete sequence 54041-54072 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP006761 Yersinia pestis 1413 plasmid pCD, complete sequence 14730-14761 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_004564 Yersinia enterocolitica plasmid pYVa127/90, complete sequence 29616-29647 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP006780 Yersinia pestis 1412 plasmid pCD, complete sequence 69302-69333 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP006753 Yersinia pestis 3067 plasmid pCD1, complete sequence 69457-69488 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP016274 Yersinia pestis strain Cadman plasmid pCD1, complete sequence 9046-9077 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP019710 Yersinia pestis strain 195/P plasmid pCD1, complete sequence 61927-61958 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_019234 Yersinia enterocolitica (type O:8) plasmid pYV-WA314, complete sequence 29864-29895 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009905 Yersinia pestis Antiqua plasmid pCD, complete sequence 1803-1834 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP011287 Yersinia enterocolitica strain KNG22703 plasmid, complete sequence 34697-34728 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009990 Yersinia pestis strain Nicholisk 41 plasmid 2, complete sequence 33208-33239 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009937 Yersinia pestis Angola plasmid pCD, complete sequence 28862-28893 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_017565 Yersinia enterocolitica subsp. palearctica Y11 plasmid pYV03, complete sequence 45132-45163 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009842 Yersinia pestis strain Dodson plasmid pCD, complete sequence 8654-8685 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP009837 Yersinia enterocolitica strain 2516-87 plasmid pCD, complete sequence 41463-41494 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP010069 Yersinia pseudotuberculosis str. PA3606 plasmid unnamed1, complete sequence 8051-8082 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP010246 Yersinia pestis Pestoides G plasmid pCD, complete sequence 27495-27526 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NZ_CP010022 Yersinia pestis str. Pestoides B plasmid pCD, complete sequence 10142-10173 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_015056 Yersinia pestis Java 9 plasmid pCD, complete sequence 51657-51688 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_015475 Yersinia enterocolitica subsp. palearctica 105.5R(r) plasmid 105.5R(r)p, complete sequence 25958-25989 9 0.719
NC_010814_1 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638598-2638629 32 NC_008791 Yersinia enterocolitica subsp. enterocolitica 8081 plasmid pYVe8081, complete sequence 27571-27602 9 0.719
NC_010814_1 1.9|2638903|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638903-2638934 32 NC_018696 Paraburkholderia phenoliruptrix BR3459a plasmid pSYMBR3459, complete sequence 239265-239296 9 0.719
NC_010814_1 1.11|2639026|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639026-2639057 32 CP001770 Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence 151732-151763 9 0.719
NC_010814_1 1.17|2639392|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639392-2639423 32 NZ_CP044283 Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence 177773-177804 9 0.719
NC_010814_1 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT 2639636-2639667 32 AP014106 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C34-MedDCM-OCT-S43-C23, *** SEQUENCING IN PROGRESS *** 39138-39169 9 0.719
NC_010814_1 1.22|2639697|32|NC_010814|CRISPRCasFinder,CRT 2639697-2639728 32 HQ316603 Cyanophage S-SSM6b genomic sequence 133730-133761 9 0.719
NC_010814_1 1.22|2639697|32|NC_010814|CRISPRCasFinder,CRT 2639697-2639728 32 NC_020875 Cyanophage S-SSM4 genomic sequence 130868-130899 9 0.719
NC_010814_1 1.25|2639880|32|NC_010814|CRISPRCasFinder,CRT 2639880-2639911 32 JF937098 Mycobacterium virus Ibhubesi, complete genome 20348-20379 9 0.719
NC_010814_1 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT 2640185-2640216 32 KY744229 Sulfolobus islandicus rod-shaped virus 8, partial genome 1533-1564 9 0.719
NC_010814_1 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT 2640185-2640216 32 KY744228 Sulfolobus islandicus rod-shaped virus 9, partial genome 486-517 9 0.719
NC_010814_1 1.32|2640307|32|NC_010814|CRISPRCasFinder,CRT 2640307-2640338 32 NC_008271 Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence 129452-129483 9 0.719
NC_010814_1 1.33|2640368|32|NC_010814|CRISPRCasFinder,CRT 2640368-2640399 32 NZ_CP045385 Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence 94380-94411 9 0.719
NC_010814_1 1.35|2640490|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640490-2640521 32 NZ_CP038854 Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence 289713-289744 9 0.719
NC_010814_1 1.35|2640490|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640490-2640521 32 KY087993 Mycobacterium phage Hammy, complete genome 59579-59610 9 0.719
NC_010814_1 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640551-2640582 32 NZ_CP026278 Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence 13816-13847 9 0.719
NC_010814_1 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640551-2640582 32 MK448228 Klebsiella phage ST15-VIM1phi2.1, complete genome 32181-32212 9 0.719
NC_010814_1 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640551-2640582 32 MN098327 Klebsiella phage Mulock, complete genome 38628-38659 9 0.719
NC_010814_1 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640551-2640582 32 MK448233 Klebsiella phage ST11-VIM1phi8.1, complete genome 13211-13242 9 0.719
NC_010814_1 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640551-2640582 32 MK448235 Klebsiella phage ST512-KPC3phi13.1, complete genome 13211-13242 9 0.719
NC_010814_1 1.41|2640856|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640856-2640887 32 NC_007974 Cupriavidus metallidurans CH34 megaplasmid, complete sequence 905939-905970 9 0.719
NC_010814_1 1.41|2640856|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640856-2640887 32 NZ_CP046333 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3 2271577-2271608 9 0.719
NC_010814_1 1.9|2638903|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638903-2638934 32 MN945901 Mycobacterium phage Ximenita, complete genome 51807-51838 10 0.688
NC_010814_1 1.9|2638903|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638903-2638934 32 MF324914 Mycobacterium phage Krueger, complete genome 51468-51499 10 0.688
NC_010814_1 1.9|2638903|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638903-2638934 32 MN234199 Mycobacterium phage Ekdilam, complete genome 58054-58085 10 0.688
NC_010814_1 1.9|2638903|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2638903-2638934 32 JX042579 Mycobacterium virus MacnCheese, complete genome 51979-52010 10 0.688
NC_010814_1 1.13|2639148|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639148-2639179 32 NZ_CP016452 Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence 1806542-1806573 10 0.688
NC_010814_1 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639270-2639301 32 NC_015264 Pseudomonas phage phiIBB-PF7A, complete genome 30009-30040 10 0.688
NC_010814_1 1.17|2639392|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT 2639392-2639423 32 NZ_CP016083 Streptomyces sp. SAT1 plasmid unnamed3, complete sequence 720409-720440 10 0.688
NC_010814_1 1.19|2639514|32|NC_010814|CRISPRCasFinder,CRT 2639514-2639545 32 NZ_CP033227 Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence 287240-287271 10 0.688
NC_010814_1 1.19|2639514|32|NC_010814|CRISPRCasFinder,CRT 2639514-2639545 32 NZ_CP015989 Sphingobium sp. EP60837 plasmid pEP2, complete sequence 158040-158071 10 0.688
NC_010814_1 1.19|2639514|32|NC_010814|CRISPRCasFinder,CRT 2639514-2639545 32 KY653119 Morganella phage IME1369_02, complete genome 36829-36860 10 0.688
NC_010814_1 1.28|2640063|32|NC_010814|CRISPRCasFinder,CRT 2640063-2640094 32 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 62216-62247 10 0.688
NC_010814_1 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR 2640551-2640582 32 MK448236 Klebsiella phage ST899-OXA48phi17.1, complete genome 585-616 10 0.688
NC_010814_1 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT 2639636-2639667 32 NZ_LN906635 Lactobacillus reuteri plasmid p53608_1, complete genome, strain ATCC 53608 112299-112330 11 0.656

1. spacer 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT matches to KY554775 (Lactococcus phage AM11, complete genome) position: , mismatch: 5, identity: 0.844

taaaggagaagaaagacatgatag--agacaagg	CRISPR spacer
taaaggagaacaaaaacatgataatcagacaa--	Protospacer
********** ***.********.  ******  

2. spacer 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT matches to KY554773 (Lactococcus phage AM8, complete genome) position: , mismatch: 5, identity: 0.844

taaaggagaagaaagacatgatag--agacaagg	CRISPR spacer
taaaggagaacaaaaacatgataatcagacaa--	Protospacer
********** ***.********.  ******  

3. spacer 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT matches to KY554768 (Lactococcus phage AM1, complete genome) position: , mismatch: 5, identity: 0.844

taaaggagaagaaagacatgatag--agacaagg	CRISPR spacer
taaaggagaacaaaaacatgataatcagacaa--	Protospacer
********** ***.********.  ******  

4. spacer 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT matches to KY554769 (Lactococcus phage AM2, complete genome) position: , mismatch: 5, identity: 0.844

taaaggagaagaaagacatgatag--agacaagg	CRISPR spacer
taaaggagaacaaaaacatgataatcagacaa--	Protospacer
********** ***.********.  ******  

5. spacer 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT matches to KY554770 (Lactococcus phage AM3, complete genome) position: , mismatch: 5, identity: 0.844

taaaggagaagaaagacatgatag--agacaagg	CRISPR spacer
taaaggagaacaaaaacatgataatcagacaa--	Protospacer
********** ***.********.  ******  

6. spacer 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT matches to KY554776 (Lactococcus phage AM12, complete genome) position: , mismatch: 5, identity: 0.844

taaaggagaagaaagacatgatag--agacaagg	CRISPR spacer
taaaggagaacaaaaacatgataatcagacaa--	Protospacer
********** ***.********.  ******  

7. spacer 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT matches to KY554774 (Lactococcus phage AM9, complete genome) position: , mismatch: 5, identity: 0.844

taaaggagaagaaagacatgatag--agacaagg	CRISPR spacer
taaaggagaacaaaaacatgataatcagacaa--	Protospacer
********** ***.********.  ******  

8. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT033469 (Aeromonas salmonicida subsp. salmonicida strain 01-B522 plasmid pAsa4b, complete sequence) position: , mismatch: 6, identity: 0.812

gcaacagcattaccggtggcctcggccagctg--	CRISPR spacer
gcatcagcattcccggtggcctcggt--gctatt	Protospacer
*** ******* *************.  ***.  

9. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT033470 (Aeromonas salmonicida subsp. salmonicida strain JF2267 plasmid pAsa4c, complete sequence) position: , mismatch: 6, identity: 0.812

gcaacagcattaccggtggcctcggccagctg--	CRISPR spacer
gcatcagcattcccggtggcctcggt--gctatt	Protospacer
*** ******* *************.  ***.  

10. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_009349 (Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete sequence) position: , mismatch: 6, identity: 0.812

gcaacagcattaccggtggcctcggccagctg--	CRISPR spacer
gcatcagcattcccggtggcctcggt--gctatt	Protospacer
*** ******* *************.  ***.  

11. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022176 (Aeromonas salmonicida strain S44 plasmid pS44-1, complete sequence) position: , mismatch: 6, identity: 0.812

gcaacagcattaccggtggcctcggccagctg--	CRISPR spacer
gcatcagcattcccggtggcctcggt--gctatt	Protospacer
*** ******* *************.  ***.  

12. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to JX173487 (Pseudomonas phage Phi-S1, complete genome) position: , mismatch: 6, identity: 0.812

gcaacagcattaccggtggcctcg-gccagctg	CRISPR spacer
tcaacagccttaccggtgccctcgaaccagcc-	Protospacer
 ******* ********* ***** .*****. 

13. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to MH179478 (Pseudomonas phage 67PfluR64PP, complete genome) position: , mismatch: 6, identity: 0.812

gcaacagcattaccggtggcctcg-gccagctg	CRISPR spacer
tcaacagccttaccggtgccctcgaaccagcc-	Protospacer
 ******* ********* ***** .*****. 

14. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to MT094431 (Pseudomonas phage BIM BV-46, complete genome) position: , mismatch: 6, identity: 0.812

gcaacagcattaccggtggcctcg-gccagctg	CRISPR spacer
tcaacagccttaccggtgccctcgaaccagcc-	Protospacer
 ******* ********* ***** .*****. 

15. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to MH179475 (Pseudomonas phage 71PfluR64PP, complete genome) position: , mismatch: 6, identity: 0.812

gcaacagcattaccggtggcctcg-gccagctg	CRISPR spacer
tcaacagccttaccggtgccctcgaaccagcc-	Protospacer
 ******* ********* ***** .*****. 

16. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to MH179472 (Pseudomonas phage 22PfluR64PP, complete genome) position: , mismatch: 6, identity: 0.812

gcaacagcattaccggtggcctcg-gccagctg	CRISPR spacer
tcaacagccttaccggtgccctcgaaccagcc-	Protospacer
 ******* ********* ***** .*****. 

17. spacer 1.28|2640063|32|NC_010814|CRISPRCasFinder,CRT matches to NC_010333 (Caulobacter sp. K31 plasmid pCAUL02, complete sequence) position: , mismatch: 6, identity: 0.812

taaccg-caatactgcgccagatcggtatgtcg	CRISPR spacer
-gtccgccaataccgcgccagatcgctatgtgg	Protospacer
 . *** ******.*********** ***** *

18. spacer 1.19|2639514|32|NC_010814|CRISPRCasFinder,CRT matches to NZ_MK757441 (Alcaligenes faecalis strain AN70 plasmid pAN70-1, complete sequence) position: , mismatch: 7, identity: 0.781

cgggctggcgggatctgttgcaaaggtggttt	CRISPR spacer
cgggctggagggctctgttgcaaagattggcg	Protospacer
******** *** ************.* * . 

19. spacer 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT matches to MN694532 (Marine virus AFVG_250M629, complete genome) position: , mismatch: 7, identity: 0.781

tatg-tagcaaaatattattttgattttgcaga	CRISPR spacer
-atacttgcaaaatattttttagattttgcatt	Protospacer
 **. * ********** *** *********  

20. spacer 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 7, identity: 0.781

tatgtagcaaaatattattttgattttgcaga	CRISPR spacer
tttttactaaaatattatgttgattatgcagg	Protospacer
* * ** .********** ****** *****.

21. spacer 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 7, identity: 0.781

tatgtagcaaaatattattttgattttgcaga	CRISPR spacer
tttttactaaaatattatgttgattatgcagg	Protospacer
* * ** .********** ****** *****.

22. spacer 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 7, identity: 0.781

tatgtagcaaaatattattttgattttgcaga	CRISPR spacer
tttttactaaaatattatgttgattatgcagg	Protospacer
* * ** .********** ****** *****.

23. spacer 1.26|2639941|32|NC_010814|CRISPRCasFinder,CRT matches to NZ_CP020716 (Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

cccaacagtgactggggcaacgtctacaatcg	CRISPR spacer
caccacagtgtctggggcatcgtctacgcccg	Protospacer
* * ****** ******** *******. .**

24. spacer 1.38|2640673|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010325 (Pantoea sp. PSNIH1 plasmid pPSP-057, complete sequence) position: , mismatch: 7, identity: 0.781

gtattgattgccctgttgacggacagggcttt	CRISPR spacer
ggacaaattgccctgatgacggacagcgctgt	Protospacer
* *. .********* ********** *** *

25. spacer 1.8|2638842|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 8, identity: 0.75

gtatcatcgctctcatgttattctccttttgt	CRISPR spacer
tttctatcgcgttcatgttattctccttatct	Protospacer
 * ..***** .**************** * *

26. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.75

gcaacagcattaccggtggcctcggccagctg	CRISPR spacer
aacccggctttaccggtggccttggccagctc	Protospacer
.   *.** *************.******** 

27. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045368 (Marinobacter sp. THAF39 plasmid phiTHAF39, complete sequence) position: , mismatch: 8, identity: 0.75

gcaacagcattaccggtggcctcggccagctg	CRISPR spacer
aagtcggcgttaccggtggcctcggccagatt	Protospacer
. . *.**.******************** * 

28. spacer 1.17|2639392|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029177 (Acidibrevibacterium fodinaquatile strain G45-3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgccggatccggagcgtagccgct----tgacccg	CRISPR spacer
gcgccgcctccggagcgtagccgtcgccgtga----	Protospacer
******  ***************..    ***    

29. spacer 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT matches to NC_019526 (Enterobacteria phage vB_KleM-RaK2, complete genome) position: , mismatch: 8, identity: 0.75

tatgtagcaaaatattattttgattttgcaga	CRISPR spacer
tttgtagtaaaatattatttttattttctctt	Protospacer
* *****.************* ***** .   

30. spacer 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT matches to MT708547 (Klebsiella phage Muenster, complete genome) position: , mismatch: 8, identity: 0.75

tatgtagcaaaatattattttgattttgcaga	CRISPR spacer
tttgtagtaaaatattatttttattttctctt	Protospacer
* *****.************* ***** .   

31. spacer 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT matches to AB897757 (Klebsiella phage K64-1 DNA, complete genome) position: , mismatch: 8, identity: 0.75

tatgtagcaaaatattattttgattttgcaga	CRISPR spacer
tttgtagtaaaatattatttttattttctctt	Protospacer
* *****.************* ***** .   

32. spacer 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT matches to MK448733 (Streptococcus phage Javan345, complete genome) position: , mismatch: 8, identity: 0.75

tatgtagcaaaatattattttgattttgcaga	CRISPR spacer
cgagcaacaaaatattattttgaaattgcaaa	Protospacer
.. *.*.****************  *****.*

33. spacer 1.35|2640490|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014127 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gcggcgagactgacgcaaaggccagtttcgac	CRISPR spacer
ccggtatccctgatgcacaggccagtttcgac	Protospacer
 ***..   ****.*** **************

34. spacer 1.35|2640490|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 8, identity: 0.75

gcggcgagactgacgcaaaggccagtttcgac	CRISPR spacer
ccggtatccctgatgcacaggccagtttcgac	Protospacer
 ***..   ****.*** **************

35. spacer 1.35|2640490|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 8, identity: 0.75

gcggcgagactgacgcaaaggccagtttcgac	CRISPR spacer
ccggtatccctgatgcacaggccagtttcgac	Protospacer
 ***..   ****.*** **************

36. spacer 1.3|2638537|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to MF063068 (Pseudomonas phage Noxifer, complete genome) position: , mismatch: 9, identity: 0.719

cagaactctgaccatgttttggggttcttgtc	CRISPR spacer
cgcagtggcgaccatgttttgaggtttttgtc	Protospacer
*. *..  .************.****.*****

37. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT307967 (Yersinia pseudotuberculosis strain IP2666 plasmid pYV2666, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

38. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_010157 (Yersinia pestis Angola plasmid new_pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

39. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_006153 (Yersinia pseudotuberculosis IP 32953 plasmid pYV, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

40. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030981 (Yersinia enterocolitica subsp. palearctica strain Y1 plasmid pYV, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

41. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_005813 (Yersinia pestis biovar Microtus str. 91001 plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

42. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to CP016946 (Yersinia enterocolitica strain YE1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

43. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009491 (Yersinia pestis strain PBM19 plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

44. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_010635 (Yersinia pseudotuberculosis PB1/+ plasmid pYPTS01, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

45. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009779 (Yersinia pseudotuberculosis PB1/+ plasmid pYAB, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

46. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009711 (Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

47. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009366 (Yersinia enterocolitica strain WA plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

48. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009713 (Yersinia pestis Pestoides F plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

49. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009703 (Yersinia pestis strain Harbin35 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

50. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009783 (Yersinia pestis strain El Dorado plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

51. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009721 (Yersinia pestis strain Shasta plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

52. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045260 (Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

53. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033695 (Yersinia pestis strain FDAARGOS_602 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

54. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_009377 (Yersinia pestis Pestoides F plasmid CD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

55. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_014017 (Yersinia pestis Z176003 plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

56. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_017263 (Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

57. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033697 (Yersinia pestis strain FDAARGOS_601 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

58. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033712 (Yersinia pseudotuberculosis strain FDAARGOS_581 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

59. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033714 (Yersinia pseudotuberculosis strain FDAARGOS_580 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

60. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016936 (Yersinia enterocolitica strain YE7 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

61. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032567 (Yersinia pseudotuberculosis strain IP2666pIB1 plasmid pIB1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

62. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_005017 (Yersinia enterocolitica 8081 plasmid pYVe8081, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

63. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033708 (Yersinia pseudotuberculosis strain FDAARGOS_583 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

64. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045147 (Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

65. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045156 (Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

66. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045160 (Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

67. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006747 (Yersinia pestis 8787 plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

68. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009972 (Yersinia pestis CO92 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

69. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_003131 (Yersinia pestis CO92 plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

70. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045151 (Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

71. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006791 (Yersinia pestis 2944 plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

72. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006750 (Yersinia pestis 3770 plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

73. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006757 (Yersinia pestis 1522 plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

74. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT596222 (Yersinia pseudotuberculosis isolate NZYP4713 plasmid 2) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

75. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033710 (Yersinia pseudotuberculosis strain FDAARGOS_582 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

76. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_017157 (Yersinia pestis D182038 plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

77. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_017153 (Yersinia pestis D106004 plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

78. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016943 (Yersinia enterocolitica strain YE3 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

79. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033716 (Yersinia pseudotuberculosis strain FDAARGOS_579 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

80. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_002120 (Yersinia enterocolitica W22703 plasmid pYVe227, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

81. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_004839 (Yersinia pestis strain KIM5 plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

82. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016939 (Yersinia enterocolitica strain YE5 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

83. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016933 (Yersinia enterocolitica strain YE165 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

84. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033689 (Yersinia pestis strain FDAARGOS_603 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

85. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006761 (Yersinia pestis 1413 plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

86. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_004564 (Yersinia enterocolitica plasmid pYVa127/90, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

87. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006780 (Yersinia pestis 1412 plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

88. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006753 (Yersinia pestis 3067 plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

89. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016274 (Yersinia pestis strain Cadman plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

90. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019710 (Yersinia pestis strain 195/P plasmid pCD1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

91. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_019234 (Yersinia enterocolitica (type O:8) plasmid pYV-WA314, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

92. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009905 (Yersinia pestis Antiqua plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

93. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011287 (Yersinia enterocolitica strain KNG22703 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

94. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009990 (Yersinia pestis strain Nicholisk 41 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

95. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009937 (Yersinia pestis Angola plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

96. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_017565 (Yersinia enterocolitica subsp. palearctica Y11 plasmid pYV03, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

97. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009842 (Yersinia pestis strain Dodson plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

98. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009837 (Yersinia enterocolitica strain 2516-87 plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

99. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010069 (Yersinia pseudotuberculosis str. PA3606 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

100. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010246 (Yersinia pestis Pestoides G plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

101. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010022 (Yersinia pestis str. Pestoides B plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

102. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_015056 (Yersinia pestis Java 9 plasmid pCD, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

103. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_015475 (Yersinia enterocolitica subsp. palearctica 105.5R(r) plasmid 105.5R(r)p, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

104. spacer 1.4|2638598|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_008791 (Yersinia enterocolitica subsp. enterocolitica 8081 plasmid pYVe8081, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctctggaaggtgtcgcgtttcagctcaaa	CRISPR spacer
tcgtgacataaggtttcgcggttcagctcaaa	Protospacer
*.*.  .. ***** ***** ***********

105. spacer 1.9|2638903|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_018696 (Paraburkholderia phenoliruptrix BR3459a plasmid pSYMBR3459, complete sequence) position: , mismatch: 9, identity: 0.719

tttgccgtcaaaagccatttgctcgatcaggg	CRISPR spacer
caagccggaaaaagccatttgctcgacccacg	Protospacer
.  ****  *****************.* . *

106. spacer 1.11|2639026|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to CP001770 (Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence) position: , mismatch: 9, identity: 0.719

atcacctgctggcacctggccaaaaactacgg	CRISPR spacer
ctggcgggctggcaactggccgaaaactacca	Protospacer
 * .*  ******* ******.******** .

107. spacer 1.17|2639392|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044283 (Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence) position: , mismatch: 9, identity: 0.719

gcgccggatccggagcgtagccgcttgacccg	CRISPR spacer
gcgcccgatccggatcgtagccgtatcgatca	Protospacer
***** ******** ********. * . .*.

108. spacer 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT matches to AP014106 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C34-MedDCM-OCT-S43-C23, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

tatgtagcaaaatattattttgattttgcaga	CRISPR spacer
caaaatggaaaatattatattaattttgcagt	Protospacer
.* .  * ********** **.********* 

109. spacer 1.22|2639697|32|NC_010814|CRISPRCasFinder,CRT matches to HQ316603 (Cyanophage S-SSM6b genomic sequence) position: , mismatch: 9, identity: 0.719

aagctggatgtaataaaagaaatgttcggaac	CRISPR spacer
atcagtgatgtaattaaagaaaagttcggtat	Protospacer
*     ******** ******* ****** *.

110. spacer 1.22|2639697|32|NC_010814|CRISPRCasFinder,CRT matches to NC_020875 (Cyanophage S-SSM4 genomic sequence) position: , mismatch: 9, identity: 0.719

aagctggatgtaataaaagaaatgttcggaac	CRISPR spacer
atcagtgatgtaattaaagaaaagttcggtat	Protospacer
*     ******** ******* ****** *.

111. spacer 1.25|2639880|32|NC_010814|CRISPRCasFinder,CRT matches to JF937098 (Mycobacterium virus Ibhubesi, complete genome) position: , mismatch: 9, identity: 0.719

ggcccatagcctttttccatgctgccggacgt	CRISPR spacer
cggccatagcctttttccaggctgtcgacaaa	Protospacer
 * **************** ****.**.  . 

112. spacer 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT matches to KY744229 (Sulfolobus islandicus rod-shaped virus 8, partial genome) position: , mismatch: 9, identity: 0.719

taaaggagaagaaagacatgatagagacaagg	CRISPR spacer
taaaggaggagaaagatatgatataatggtga	Protospacer
********.*******.****** *.  . *.

113. spacer 1.30|2640185|32|NC_010814|CRISPRCasFinder,CRT matches to KY744228 (Sulfolobus islandicus rod-shaped virus 9, partial genome) position: , mismatch: 9, identity: 0.719

taaaggagaagaaagacatgatagagacaagg	CRISPR spacer
taaaggaggagaaagatatgatataatggtga	Protospacer
********.*******.****** *.  . *.

114. spacer 1.32|2640307|32|NC_010814|CRISPRCasFinder,CRT matches to NC_008271 (Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcgtccgtggtcggatttccgatgccggt	CRISPR spacer
atttcgtccgtggtcggatacccgaggggacc	Protospacer
 ****************** .**** *  . .

115. spacer 1.33|2640368|32|NC_010814|CRISPRCasFinder,CRT matches to NZ_CP045385 (Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence) position: , mismatch: 9, identity: 0.719

ctgtcggcaaaccgtccggcaatgtcagcggc	CRISPR spacer
aacgccgcaaacggtccggcaatgtctgctgt	Protospacer
    * ****** ************* ** *.

116. spacer 1.35|2640490|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gcggcgagactgacgcaaaggccagtttcgac	CRISPR spacer
cctgtatccctgatgcacaggccagtttcgac	Protospacer
 * *..   ****.*** **************

117. spacer 1.35|2640490|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to KY087993 (Mycobacterium phage Hammy, complete genome) position: , mismatch: 9, identity: 0.719

gcggcgagactgacgcaaaggccagtttcgac	CRISPR spacer
gcggcgagactgacgcaagcgccccggctggc	Protospacer
******************. ***    ..*.*

118. spacer 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026278 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence) position: , mismatch: 9, identity: 0.719

atcatggtatatgctccttttgctttgaagtt	CRISPR spacer
tttatcgtatatgctcattttgcttttatccc	Protospacer
 *.** ********** ********* *  ..

119. spacer 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

atcatggtatatgctccttttgctttgaagtt	CRISPR spacer
tttatcgtatatgctcattttgcttttatccc	Protospacer
 *.** ********** ********* *  ..

120. spacer 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to MN098327 (Klebsiella phage Mulock, complete genome) position: , mismatch: 9, identity: 0.719

atcatggtatatgctccttttgctttgaagtt	CRISPR spacer
tttatcgtatatgctcattttgcttttatccc	Protospacer
 *.** ********** ********* *  ..

121. spacer 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 9, identity: 0.719

atcatggtatatgctccttttgctttgaagtt	CRISPR spacer
tttatcgtatatgctcattttgcttttatccc	Protospacer
 *.** ********** ********* *  ..

122. spacer 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 9, identity: 0.719

atcatggtatatgctccttttgctttgaagtt	CRISPR spacer
tttatcgtatatgctcattttgcttttatccc	Protospacer
 *.** ********** ********* *  ..

123. spacer 1.41|2640856|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cccgtggcgtggttcgatccgctttccacgta	CRISPR spacer
atggtggcgtggttcgtgccgctttctgagca	Protospacer
 . *************  ********.. *.*

124. spacer 1.41|2640856|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.719

cccgtggcgtggttcgatccgctttccacgta	CRISPR spacer
atggtggcgtggttcgtgccgctttctgagca	Protospacer
 . *************  ********.. *.*

125. spacer 1.9|2638903|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to MN945901 (Mycobacterium phage Ximenita, complete genome) position: , mismatch: 10, identity: 0.688

tttgccgtcaaaagccatttgctcgatcaggg	CRISPR spacer
gaggccgtcgaaagccatctgctcgactgcgt	Protospacer
   ******.********.*******... * 

126. spacer 1.9|2638903|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to MF324914 (Mycobacterium phage Krueger, complete genome) position: , mismatch: 10, identity: 0.688

tttgccgtcaaaagccatttgctcgatcaggg	CRISPR spacer
gaggccgtcgaaagccatctgctcgactgcgt	Protospacer
   ******.********.*******... * 

127. spacer 1.9|2638903|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to MN234199 (Mycobacterium phage Ekdilam, complete genome) position: , mismatch: 10, identity: 0.688

tttgccgtcaaaagccatttgctcgatcaggg	CRISPR spacer
gaggccgtcgaaagccatctgctcgactgcgt	Protospacer
   ******.********.*******... * 

128. spacer 1.9|2638903|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to JX042579 (Mycobacterium virus MacnCheese, complete genome) position: , mismatch: 10, identity: 0.688

tttgccgtcaaaagccatttgctcgatcaggg	CRISPR spacer
gaggccgtcgaaagccatctgctcgactgcgt	Protospacer
   ******.********.*******... * 

129. spacer 1.13|2639148|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 10, identity: 0.688

ctccagaggcggcagcaatgtttgtgtcgcct	CRISPR spacer
cgatccaggcggcagcaatcttcgtgtcgttc	Protospacer
*  .  ************* **.******...

130. spacer 1.15|2639270|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NC_015264 (Pseudomonas phage phiIBB-PF7A, complete genome) position: , mismatch: 10, identity: 0.688

gcaacagcattaccggtggcctcggccagctg	CRISPR spacer
tcaacagccttaccggtgccctcgaaccatcc	Protospacer
 ******* ********* *****. * ... 

131. spacer 1.17|2639392|32|NC_010814|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

gcgccggatccggagcgtagccgcttgacccg	CRISPR spacer
cggccggacccggagcgcagccgctccgtcac	Protospacer
  ******.********.*******. ..*  

132. spacer 1.19|2639514|32|NC_010814|CRISPRCasFinder,CRT matches to NZ_CP033227 (Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence) position: , mismatch: 10, identity: 0.688

cgggctggcgggatctgttgcaaaggtggttt	CRISPR spacer
cggtctggcgggacctgttgcaacacctttcg	Protospacer
*** *********.********* . .  *. 

133. spacer 1.19|2639514|32|NC_010814|CRISPRCasFinder,CRT matches to NZ_CP015989 (Sphingobium sp. EP60837 plasmid pEP2, complete sequence) position: , mismatch: 10, identity: 0.688

cgggctggcgggatctgttgcaaaggtggttt	CRISPR spacer
cggtctggcgggacctgttgcaacacctttcg	Protospacer
*** *********.********* . .  *. 

134. spacer 1.19|2639514|32|NC_010814|CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 10, identity: 0.688

cgggctggcgggatctgttgcaaaggtggttt	CRISPR spacer
gtggctggcgggatctatttcaaagtcacgct	Protospacer
  **************.** ***** ..  .*

135. spacer 1.28|2640063|32|NC_010814|CRISPRCasFinder,CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 10, identity: 0.688

taaccgcaatactgcgccagatcggtatgtcg	CRISPR spacer
gaaccgcattgctgcgccagatcgccaccaat	Protospacer
 ******* *.************* .*.    

136. spacer 1.36|2640551|32|NC_010814|CRISPRCasFinder,CRT,PILER-CR matches to MK448236 (Klebsiella phage ST899-OXA48phi17.1, complete genome) position: , mismatch: 10, identity: 0.688

atcatggtatatgctccttttgctttgaagtt	CRISPR spacer
tttatcgtatatgctcattttgcttttctccc	Protospacer
 *.** ********** *********    ..

137. spacer 1.21|2639636|32|NC_010814|CRISPRCasFinder,CRT matches to NZ_LN906635 (Lactobacillus reuteri plasmid p53608_1, complete genome, strain ATCC 53608) position: , mismatch: 11, identity: 0.656

tatgtagcaaaatattattttgattttgcaga	CRISPR spacer
agcaacacaaattattattttgattatgcaat	Protospacer
 ...  .**** ************* ****. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 212088 : 224206 15 Microcystis_phage(12.5%) NA NA
DBSCAN-SWA_2 264708 : 275357 9 Burkholderia_phage(66.67%) NA NA
DBSCAN-SWA_3 1189992 : 1197562 6 Tupanvirus(16.67%) NA NA
DBSCAN-SWA_4 1473384 : 1512925 26 Pseudomonas_virus(12.5%) integrase,transposase,protease attL 1474848:1474866|attR 1494314:1494332
DBSCAN-SWA_5 1961132 : 1972299 13 Bacillus_phage(20.0%) NA NA
DBSCAN-SWA_6 2044806 : 2057510 10 Bacillus_phage(25.0%) protease NA
DBSCAN-SWA_7 2139720 : 2147483 8 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_8 2649363 : 2658368 8 Acinetobacter_phage(33.33%) NA NA
DBSCAN-SWA_9 3054098 : 3085121 31 Lactococcus_phage(25.0%) integrase,transposase attL 3056714:3056728|attR 3084459:3084473
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_010815
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 15984 : 65010 48 Bacillus_phage(25.0%) transposase,integrase attL 26462:26476|attR 53534:53548
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage