CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_011138	Alteromonas mediterranea DE, complete sequence	2 crisprs	DinG,RT,DEDDh,WYL,cas3,Cas9_archaeal,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PrimPol	0	46	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_011138_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011138_1

705680-705770

Orphan

Consensus_repeat	Method
AGCCCTGAGCGAGTATGCAGCCCTGAGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011138_1

>merge|NC_011138|1|705680-705770|CRISPRCasFinder
AGCCCTGAGCGAGTATGCAGCCCTGAGCGAGTATGCAGCCCTGAGCGAGTCGCGAGCAAAAAGCCCTGAGCGAGTATTCAGCCCTGAGCGA

>NC_011138|1|1|705680-705770|CRISPRCasFinder
AGCCCTGAGCGAGTATGCAGCCCTGAGCGA	GTATGCAGCCCTGAGCGAGTCGCGAGCAAAA
AGCCCTGAGCGAGTATTCAGCCCTGAGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_011138.3\|WP_012517184.1\|696429_700227_+\|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA	unknown	unknown	gnl\|CDD\|237018
NC_011138.3\|WP_012517181.1\|692190_693906_-\|TIGR03545-family-protein	unknown	unknown	gnl\|CDD\|274640
NC_011138.3\|WP_012519942.1\|691800_692091_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NC_011138.3\|WP_012517182.1\|694319_695942_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NC_011138.3\|WP_012517198.1\|714202_714526_-\|hypothetical-protein	unknown	unknown	unknown
NC_011138.3\|WP_012517179.1\|691078_691795_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NC_011138.3\|WP_012517199.1\|714669_715554_-\|DUF3530-family-protein	unknown	unknown	gnl\|CDD\|378799
NC_011138.3\|WP_012517195.1\|710685_711756_+\|response-regulator	unknown	unknown	gnl\|CDD\|381124
NC_011138.3\|WP_012519941.1\|700791_701568_-\|TIGR04211-family-SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|275056
NC_011138.3\|WP_012517200.1\|715719_716436_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NC_011138.3\|WP_012517196.1\|711752_712730_+\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NC_011138.3\|WP_012517192.1\|708209_709016_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NC_011138.3\|WP_012517189.1\|704307_704985_-\|DNA-mismatch-repair-endonuclease-MutH	unknown	unknown	gnl\|CDD\|179923
NC_011138.3\|WP_012517190.1\|705098_705641_+\|RNA-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|234820
NC_011138.3\|WP_023559506.1\|701566_703072_+\|CYTH-domain-containing-protein	unknown	unknown	gnl\|CDD\|143624
NC_011138.3\|WP_012517194.1\|709842_710676_+\|thymidylate-synthase	unknown	unknown	gnl\|CDD\|234984
NC_011138.3\|WP_012517188.1\|703132_704215_+\|AraC-family-transcriptional-regulator	unknown	unknown	unknown
NC_011138.3\|WP_041702999.1\|705912_708204_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|182937
NC_011138.3\|WP_012517193.1\|709020_709824_+\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|234599
NC_011138.3\|WP_012519939.1\|712758_714105_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341039

Protein	Function_ID	Function_description	E-value
NC_011138.3\|WP_012517184.1\|696429_700227_+\|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA	gnl\|CDD\|237018	PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NC_011138.3\|WP_012517181.1\|692190_693906_-\|TIGR03545-family-protein	gnl\|CDD\|274640	TIGR03545, TIGR03545, TIGR03545 family protein. This model represents a relatively rare but broadly distributed uncharacterized protein family, distributed in 1-2 percent of bacterial genomes, all of which have outer membranes. In many of these genomes, it is part of a two-gene pair.	7.61539e-90
NC_011138.3\|WP_012519942.1\|691800_692091_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	4.30224e-38
NC_011138.3\|WP_012517182.1\|694319_695942_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.05268e-67
NC_011138.3\|WP_012517199.1\|714669_715554_-\|DUF3530-family-protein	gnl\|CDD\|378799	pfam12048, DUF3530, Protein of unknown function (DUF3530). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.	1.5055e-07
NC_011138.3\|WP_012517179.1\|691078_691795_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	5.24123e-115
NC_011138.3\|WP_012519941.1\|700791_701568_-\|TIGR04211-family-SH3-domain-containing-protein	gnl\|CDD\|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	7.33377e-53
NC_011138.3\|WP_012517200.1\|715719_716436_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	1.13733e-97
NC_011138.3\|WP_012517196.1\|711752_712730_+\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.07256e-66
NC_011138.3\|WP_012517192.1\|708209_709016_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	2.16296e-26
NC_011138.3\|WP_012517189.1\|704307_704985_-\|DNA-mismatch-repair-endonuclease-MutH	gnl\|CDD\|179923	PRK05070, PRK05070, DNA mismatch repair protein; Provisional.	3.40258e-143
NC_011138.3\|WP_012517190.1\|705098_705641_+\|RNA-pyrophosphohydrolase	gnl\|CDD\|234820	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed.	3.85917e-101
NC_011138.3\|WP_023559506.1\|701566_703072_+\|CYTH-domain-containing-protein	gnl\|CDD\|143624	cd07756, CYTH-like_Pase_CHAD, Uncharacterized subgroup of the CYTH-like superfamily having an associated CHAD domain. This subgroup belongs to the CYTH-like (also known as triphosphate tunnel metalloenzyme (TTM)-like) superfamily. Members of this superfamily hydrolyze triphosphate-containing substrates, require metal cations as cofactors, and have a unique active site located at the center of an eight-stranded antiparallel beta barrel tunnel (the triphosphate tunnel). A number of proteins in this subgroup also contain a C-terminal CHAD (Conserved Histidine Alpha-helical Domain) domain which may participate in metal chelation or act as a phosphor-acceptor. The name CYTH originated from the gene designation for bacterial class IV adenylyl cyclases (CyaB) and from thiamine triphosphatase. Class IV adenylate cyclases catalyze the conversion of ATP to 3',5'-cyclic AMP (cAMP) and PPi. Thiamine triphosphatase is a soluble cytosolic enzyme which converts thiamine triphosphate to thiamine diphosphate. This domain superfamily also contains RNA triphosphatases, membrane-associated polyphosphate polymerases, tripolyphosphatases, nucleoside triphosphatases, nucleoside tetraphosphatases and other proteins with unknown functions. Proteins of this subgroup have not been characterized.	2.17345e-70
NC_011138.3\|WP_012517194.1\|709842_710676_+\|thymidylate-synthase	gnl\|CDD\|234984	PRK01827, thyA, thymidylate synthase; Reviewed.	0
NC_011138.3\|WP_012517195.1\|710685_711756_+\|response-regulator	gnl\|CDD\|381124	cd17593, REC_CheC-like, phosphoacceptor receiver (REC) domain of uncharacterized response regulators containing a CheC domain. This subfamily is composed of uncharacterized proteins containing an N-terminal REC domain and a C-terminal CheC domain that may function as the output/effector domain of a response regulator. CheC is a CheY-P phosphatase, affecting the level of phosphorylated CheY which controls the sense of flagella rotation and determine swimming behavior of chemotactic bacteria. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.65433e-63
NC_011138.3\|WP_041702999.1\|705912_708204_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|182937	PRK11061, PRK11061, phosphoenolpyruvate--protein phosphotransferase.	0
NC_011138.3\|WP_012517193.1\|709020_709824_+\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|234599	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed.	3.63688e-115
NC_011138.3\|WP_012519939.1\|712758_714105_-\|MFS-transporter	gnl\|CDD\|341039	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily. AmpG acts as an inner membrane permease in the beta-lactamase induction system and in peptidoglycan recycling. It transports meuropeptide from the periplasm into the cytosol in gram-negative bacteria, which is essential for the induction of the ampC encoding beta-lactamase. The AmpG family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.84411e-90

>NC_011138.3|WP_012517190.1|705098_705641_+|RNA-pyrophosphohydrolase
MIDADGFRANVGIVICNKMGQVFWARRYGQHSWQFPQGGIDEGESAEQAMYRELHEEVGLTPKDVTILSVTRNWLRYKLPKRLIRQGSNPVCIGQKQKWFLLQLDCNERDVNVLKTGHPEFDDWRWVSYWYPIRNVVSFKRDVYRRVMKEFSPVVMSAQQRPLQRQNAAPHKRGKKRRRG
>NC_011138.3|WP_012517189.1|704307_704985_-|DNA-mismatch-repair-endonuclease-MutH
MQPPASPPSSPDSLLKRCHAIAGLTLGELAEMAHVAIPANLQRHKGWPGMLIEKWLGASAGSKPQQDFPELGIELKTIPIDANFSPLETTYVCFAPLLMSPGITWETSNVRNKLQQVLWLPIEGDRAIPLAERRVATGFYWRPNEHEDALLRHDWEELVEYIATGQVESITSRQGEALHIRPKAANGKVLTDALGPEGQRIKTRPRGFYLRKTFTQQILMNAFGG
>NC_011138.3|WP_012517188.1|703132_704215_+|AraC-family-transcriptional-regulator
MTSAIFSYCLYALLGVYAVGVVRLFVQKVNLSSTRWLIGAFVCWPLFMLDEWLRLAHATDLAVIYGLSDVFAVLAITCCYRAIKPMLLAYPTARKRLWWPVVVTALFQCTVLLIPVEDKQRWLLSSPHGEPLVLWPAYIASLLTGFSVLLIGILITEHIQMYHRHLPEQAVDIKNLKMPKLAGVMGSLVGVAFMSILLVTAATFGFFPVPFWESFHHLMLGTAILIVLFSLTFIRRTSPSPLDYERLDEGKATPYEISSIISKAERYTLESKAYKTRFLTLSAFCKGADIDPTSLALALQLSERKNFRRFIFHYRLEYAKNVLLRSDAKLEAVAKRIGVNSEKFLSEYLVKHLHTPSQKK
>NC_011138.3|WP_023559506.1|701566_703072_+|CYTH-domain-containing-protein
MSEIELKFVTGDDAHQAFTQRVLPLFEKHRIQVNSHREMRLENDYYDTEKLDFQNQKMGFRVRGNNGEYEQTLKTNGVVSGGLHKRMEYNVSLEKSQPDLALFDESVWPQGWDVSAKNASLSKQFSTHFTRNAYVVALDDSEVEIVLDCGKASTEKASSPINEIELELMSGDINTLFTLAVLINDNMPVRLSDVSKAAQGYQLLHGFNAKIRHLPDFLALEDTTTTEEAFSRAVQTALAHWQHHEHVFCESGSIKMLAEVAKSVRLLLQSVSLYLPVLQCPELLALHKKLVAHAQKWGWQDDLQSLRYLLSKKSMFSKTLSKHPAVVSYLQGRQTGLMQAHEPEKLFFDNDATDIKLHAISLIQNKPWQKEATGYDHPVLDHAKGWLSQGWQTVQQSMPLSKTMGPVNYSAVEIMLRQTLWSGFLLGDLFVEERGNFRAPWLDLLTGIDELNALLMLKQSIDDAEVDSHDEVRKWTAEKLSTLIRIMERTRTVAMQRDVYW
>NC_011138.3|WP_012519941.1|700791_701568_-|TIGR04211-family-SH3-domain-containing-protein
MVALSTADDADTLPLSLSFRNATTPFLGAKFRQKWNKLAFIAVNQYHLHVLNSKIGLHMIRKWLAAALIACSFQAFSLQDIADLEASSSHYIRDDLFIFVHTGPGRNYRILGSIEAGTPITVLARDNDAEFTQITDPEGRKGWVESKFVSNTMSQAEQLPIISEKLAESQSSLQTLQSDNAKLRQQLNDARQQVSKLTTTNDEQASQIIRLTAKVESANKDELVMWFTRGGIVAGIGILLGVMLTYLPKRKRRSSEWM
>NC_011138.3|WP_012517184.1|696429_700227_+|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA
MLINDTLHTTSPLRQRIRDYYRISESVAVDQILPIAEVNPRARSRAWERARKMVLQIRREQEGHGGVDALLNEYSLSTAEGVVLMCLAEALLRVPDRATQDELIRDKLSKGQWTPHLGNSDSLFVNASAWGLLFTGNMVNYADKRKKEQFGLLKQTIGRLGEPVIRRAMNIAMRVMGRQFVMGETIEDAVDRAKEKETKGYVYSYDMLGEGARTMRDADRYYDAYVKAIKVIGKAANGRGPKRSPGISVKLSAIHPRFEFSHRERAMVDIPPRLKALCMMAKEYDIGLTVDAEEADRLELSLDIIEAVFRDDDLNGWTGFGLAVQAYQKRAIHVIEHLRNLTLEVGRPLMVRLVKGAYWDTEIKLTQQAGLEEFPVFTRKSSTDVSYHACANRLLEYRDTIYPQFATHNAYTASVIVELAGDDKEGFEFQCLHGMGDTLYDQVVTEDKIQCRVYAPVGEHEDLLAYLVRRLLENGANSSFVNAIVDDEKPVESLLEDPVEKTQRLKVRYNKLIKTPRGLYAPERDNSRGLDLTDTNAVTALKHELERWQDYYKVTDEVPEGATPVLSPTDHTDIVGYHYYATPDDMRKALDDTDAGFEAWSKRDVSERAEILNRTADALERHMAELIAICMREAGKVAQDSIDEVREAVDFCRYYAVRAEELAEDQRLLPRGVVLCISPWNFPLAIFLGQVAAALVTGNTVVAKPAEQTSIVAQRAVDIMHSVGLPEDALKLIVSPGKEVGETLLPDERIKAVMFTGSTQTGTLISQVLAERGGEQVPLIAETGGQNCMMVDSTALPEQVVDDVIHSGFQSAGQRCSALRVLFVQDDIADELTEMLIGALKELTVGDPTQLATDVGPVIDEKALKSLTDHQDYMEGKGKLLYRSEMPKGFENGTFFAPTLYEIENIDVLEREVFGPVVHIVRFKSKELDNVLEQINGTGYGLTMGIHSRIEERANELAAKSRAGNVYINRNMIGAIVGVQPFGGRGLSGTGPKAGGPNYLPRLMMERATPKPSHIDDVDGTDAALIGDEKIAERAHVMMDKAKAVEIQWRHTPINDRISMVRQLLAKIAKVDIVDDLADDLNRTLATARQQLTSVERKLAKAQTLPGPTGESNKLYLEPRGILVCFADKEVTFEYWLLSIVTALSTGNPVVSVVSEIFYEEAVEIQNKFESTGAPKGLFQVARLAHLDTLLMDEDLSGVVVDSSTERTARITAMLSSREGAILPVITAEYNDNLIQRLMTEKTISIDTTASGGNTSLMTLVEDDE
>NC_011138.3|WP_012517182.1|694319_695942_-|methyl-accepting-chemotaxis-protein
MWLRKFSLIQRLGIIAALITLLFVLLTALVLNRHYEALKQKSYDENQHLVEVVHTLLGSFAKRDDVDEATAKQLALEAVKALRYDGNNYFWIQDETPAMVMHPMKPALDGKDLRTFKDGNGRAFFLEMAQKVKAKGAGFVDYVWPLPGEEAPTDKISYVKAFKPWGWTVGSGIYLTNLEEEYAHLRNVIVVFCVVSVVLVILLIYVIGGSIVKPVQEVSERMKDISQGEGDLTRSLPETGQDEVTRLARYFNEYTEKMRQSLLGIRENINSLTQQAELVETSSKNSNARAQTQNENMLQVAAAMEEMTTQINEVSNNADSAEKGTSSARSNVQHGASVVDSTVQDIRSLTSDIESVSNVVTELAAQTDSIGAVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTGQSTDEIQAMIEKLQSNAKNAVDAVKVSQAASSKTVDNAIQANQNLQEADRLMTEIADKSSEIARATEQQAEAATEANMRINALSGAADSSLRTADELAAASQALRSSCLAIMEIANRFKL
>NC_011138.3|WP_012517181.1|692190_693906_-|TIGR03545-family-protein
MSSGSKGKPILLWVVGFFVLLFLVYVLFANTIIKSILESKLGESYGAEVNIDDFDHSLYPTTVTLKGIALTNPTKPSHNQVFVGEANADVALKPLLDDQVIVNNLNLLEVQFDTERPSEGEVYRVPERSLSFNEIKAKAQEAVPTVDELLARNPLKTTAAIENAKSAYETYGKGLKEDYQSLPNKERIAYYKTQVAELKDTNYKDPQALVQAKSAFDKLKEEMQADRALITDFTAKASDAKEALSKSVEALKQAPQEDYALLKGVIAGDQAALSQVTYFVFGDKAAEYTEYLMSAMQIVMPLIQGEEKSEAPAEVPSILVREANVSVLWQNESITSKWNNITNVHEVFGNPTTFTIEAAGDVLKSFTSSGEFWIDGDGVDASQVWELAGVNMSDVSFSGNDTLNAVLKSALMKTNGSMKVTDNLLTGTGEVDLQQLVMEATGTSDITSAIAQALQTLTSLNMTMLLDGTLSNPDFNIKSDLDNKLAKAALSQLTASQQDKLDELNTKLNSMISSEQSLLSGELVDVNSMLSAAQGDSAALQELLQAQLNNVVEQQKNKLFDKLKGKLGQGE
>NC_011138.3|WP_012519942.1|691800_692091_-|cell-division-protein-FtsB
MLQGKWLPIVLLVLLGLLQYRLWFGKNSIPDYFSRKQEVQTQALQNANLAQRNALLKADINDLKIGLEAIEERARNELGLIKKGETFYRILPADSK
>NC_011138.3|WP_012517179.1|691078_691795_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MTSPRVVAVIPAAGVGSRMQADRPKQYLSLNGKTILEHTIDALLNHPLIDDVIVAISQGDEYFDQLGLRQKPIRVVDGGKERADSVLNGILSLDENDWALVHDAARPCVDDADISNLLSLIGSEDVTGGILATPVRDTMKRVKPSSNIISHTEDRNGLWHALTPQLFPAMLLKRALQEGLAQGVSITDEASAMEFAGHSVAMVSGSPANIKITHPADLPLAEFYLKQKFSAQGDSAKN
>NC_011138.3|WP_041702999.1|705912_708204_+|phosphoenolpyruvate--protein-phosphotransferase
MLTTLKRIVQEMNQIPALDTALFRLASRVKHTLNVDSCSIYLADYEAQEFILKATDGLHPDAVEQVRIGFSEGLIGLVGQREEPLNIVNAHSHPRFKHYPEVKEEKYNAFLGTPIINQRRVLGVITLQQAEMRRFSEDEEAFLVTLAAQLALEITNADIRGALTLSNSPDNIAQQKHVHGIAGSPGLAIGKGVSPDKSINLKNWVVKRSKSPQDQIKLYRKGVEVTRGHVDTLSNRLDDAIPDDVKSIFQLYHHLLDANSLGREVEEKIRQGWDAASSLKMVVESYAARFRAMDDPYMQERAIDIVDLSDRILANILYEANGQKVTEKVITEASILVADEVSAPMLAEFPKDKLKGIISIRGSNNSHAAILARAMGVPAVMGCQNVTPALLEDKEILLDGYSGEVIVSPERNIKSEFIQLIEEESAIAEKIDAEADKPCESVDGCRMSLYINAGLSAEVELNAEQIGAGVGLYRTEIPFMLRERFPSEQEQVKLYRQVLEAAPELPITMRTLDVGGDKPLPYFPINEENPFLGWRGIRLTLDHPEIFLVQVRAMLRASVGLSNLQIMLPMISTVSEVQESKRLINQAFYEISDEIAESGQTLNKPKLGIMLEVPSVLYQLPQLAKHVDFFSVGSNDLTQYLLAVDRNNTRVADLYNSYHPAVLGALYDVVQKANQNQVPVTICGEIAGEPAGALLLMGMGYRRLSMNGFNLRKINWLIRKVTLDECKQLLSLALTSVSHEEVFVHLNQYLETKGLGGLIRAGA
>NC_011138.3|WP_012517192.1|708209_709016_+|sulfite-exporter-TauE/SafE-family-protein
MDPFVVIIVSCLILGSVVGILAGMLGIGGGLIIVPALSYLLVHFMGMTTETVMPVAIATSLSTIIFTGTSSALAHYKLGNIQRYIVLYTGLGIAFGAIAGAQVASHMSGELLKDVFAVLVILIALQMIFGKQKASDNEASKGTLAAVGGTAGILSALMGIGGGALLVPALVWFRVNIRAAIGCAAFCGLVIAVFGTTSFVIAGWNAIDVPEHSLGYVYLPATAGIVATSMFTANIGAKLGQRVNVRVLKAMLACLLVLVSIRMILGIE
>NC_011138.3|WP_012517193.1|709020_709824_+|prolipoprotein-diacylglyceryl-transferase
MEQSSYLVFPSIDPVIFSMGPLSVRWYGLMYLVGFIAAYLLAQKRLSQTSWSREQLSDLLFWSFVGVILGGRIGYVFFYQFGMFLDDPLYLFKIWAGGMSFHGGLLGVLAALFWRAKCMNTTFLRLGDFVAPLVPIGLGAGRIGNFLNAELWGRSTDVPWAVIFPNAGNIPRHPSQLYEFALEGVLLFIILWLYSAKKRPVGAVSGLFLLGYGSFRFIVEYFREPDAHIGLYQMGLSQGQLLCLPMIALGIGLIVRAYTRGKDRVEQ
>NC_011138.3|WP_012517194.1|709842_710676_+|thymidylate-synthase
MKEYLALMRHVRDTGVKKKDRTGTGTLSVFGYQMRFNLQEGFPLVTTKKCHLKSIIHELLWFLKGETNIAYLKEHGVKIWDEWATDEGELGPVYGHQWRSWDRGDGTSVDQIAEVVEQIKNNPDSRRLIVSGWNPAVLPDTNYSPKENAAMGKQALPPCHTLFQFYVLDGKLSCQLYQRSGDIFLGIPFNIASYALLTMMIAQVCDLEPGDFIHTLGDAHLYSNHLEQVELQLSREPFERPTMEINPEVKDIFGFTFDDFTLKNYQSHPHIKAPVAI
>NC_011138.3|WP_012517195.1|710685_711756_+|response-regulator
MSTPILICDDSGFARRQMARSLPDSWDVDISFAENGEQALTLIREGKGDVVFLDLNMPVMDGYQTMEEIRKHDLPCLVIVVSGDVQAQAREKMLALGALDFIRKPIDNDKLSHILSSYGIYSGETHSSGAKLQKVEEASQTKATASQRVTSTEEKLDACREMVNIAMGRAGESLAELLGEFIDLPIPNVNLIESNELSMAVAEINRNESVSAVSKGFISEGVSGEALVIFNDTNSQNIVELLKYPPSASSDKLALEALMDVSNILIGACLNGLSEQLKVAFSHTHPVLLGQHQGLSALLSDNVQRWGKLMAIEIGYAIKARDISFDLLLLFPGDAMSQVYSRLLDDSYDTDDKEGL
>NC_011138.3|WP_012517196.1|711752_712730_+|sensor-domain-containing-diguanylate-cyclase
MNASIDTLNRSAVSQVPLELLDSIEVGIAVLDRNFTVQVWNKFLENHSAKKVDFIIGHSLFDHFPEIEEKWLRTKVDPVFNLKSPVFIIWEQRPYLFKFACNRPVTCAAEYMYQNVTMFPIVDKDGNVERFCMLVYDVTEQALGKLGMEHLNQELKTASRVDGLTGLFNRRYWQERFDEMYKLCVRRDKPSTAVMLDIDHFKRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSTVEDARIVAERIRQLAQRLVVEHEGESINFTVSLGLAQFCSAFKGPLAWLECADKALYDAKESGRNQYRVYDTSQR
>NC_011138.3|WP_012519939.1|712758_714105_-|MFS-transporter
MAQYAFELLPKAEVLLTALKTFNDKRYLSIFLFGISSGFPWIMIGSVLSAWLKDEGLSRSAIGLFGIIFATYSFNFLWSPLVDKLKPPLLGQRKGWIFAMQGCIVLLCLGMSQLSATYDLYYVALIGLLIAVASATQDIAIDGFRIDCVEKEDKDGMSAASSVATAGWWTGYGGLGAIPFFLADLTTWSWPNIYLLLSVIMVLLMCATCIADEPQIDREALLEKITDANATSSPLVYWIRTTLITPFAEFFNRNGVKLAASFLLFIFLFKIGEAFLGRMSIVFYKEVGFSNSDIATYSKLLNWWVTIVFSLLGGLVNIRYGIYRGLMIAGVAMAASNLLFALIAQTGPSTSLLAVTVIVDGFTGAWSTVAMVAFISLLCNRAFSATQYALMASLSVAGRTLVASSSGIVVDSLNGNWSLFFIITAVMVIPSLCFLYSIRHHIKRVETA
>NC_011138.3|WP_012517198.1|714202_714526_-|hypothetical-protein
MNVQDFVDNKAKQLCFYLRAFWQGELPIEEIELFFWDSMEEWGQIEYTLTQPYTQKERVFWHVLHQVHYWNEEKLTKDQFLIDELNNCVNFLEGLGHCPLDCVGIRP
>NC_011138.3|WP_012517199.1|714669_715554_-|DUF3530-family-protein
MKRQTILLLFAVIVSLLPMTAHSNFLKDVSNAYLPGEVKTIMVGEGEAPIIEIGAKTPLPLGTAIVLTEPFPSSLTLSQGNSLADLLAEKGWNVVISPFHLPVTPSEPINEDTMPGSLDEGDSAPSSQPNEIHPRSNQLTQYLSFETTVTALTLQLSALYNYLQDRGGYRMVIAQGMLATTFLSATEQQPALEPDTFIAISPFWPEESTNNLVIETMAQANYPVLDVSLNNFNDWESNTTLKRKIRAKNALKLHYRQINIPNNSLTFSIRDIHKPPQIQMVANSAIGWTRHLGW
>NC_011138.3|WP_012517200.1|715719_716436_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MANPSFVYNPPMTPYLDILYQDEDMVVAHKPSGLLSVPGKALEHRDSLISRVNTVYPTATVVHRLDMATSGILVLALNKDSHRHISKQFELRLTQKRYFARVHGHIEEDSGEVDLPLICDWPNRPKQMVDFERGKKAITRFEVIERATDDAARRYTLVALYPITGRSHQLRVHMLALGHPILGDRLYAHDEALSMAPRLQLHAESLSLTHPTLEKWLHFKTPIPFSHYRPGALSIDRD

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Crispr_ID: NC_011138_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011138_2

3208645-3212029

TypeI-E

I-E

Consensus_repeat	Method
CGGTTCATCCCCGTGGGCACGGGGAACAC	CRISPRCasFinder
CGGTTCATCCCCGTGGGCACGGGGAACAC	CRT
CGGTTCATCCCCGTGGGCACGGGGAACAC	PILER-CR
CGGTTCATCCCCGTGGGCACGGGGAACAC	PILER-CR

55 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL

The CRISPR arrays of NC_011138_2

>merge|NC_011138|2|3208645-3212029|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
TGGTTCATCCCCGTGGGCACGGGGAACACTCTCAATCAGGAAATCTTTGATGAACTCTAAACGGTTCATCCCCGTGGGCACGGGGAACACGACCCGCCACCAACATCTACACGCTGGCCTGACGGTTCATCCCCGTGGGCACGGGGAACACCGATTTCGGCTCCTTTTTATAGCGAACCATATCCGGTTCATCCCCGTGGGCACGGGGAACACTCAGGTTGAAGTAACAACATAACACTGTTGCGCGGTTCATCCCCGTGGGCACGGGGAACACCTTTCAATGGCACGAAGAGTCTCACCTGTACGCGGTTCATCCCCGTGGGCACGGGGAACACGCAAAAAGAAAGGCCCGCAAGAGGAAATGCTACGGTTCATCCCCGTGGGCACGGGGAACACACACATACGTGATATTCGCGTTTAATCACTGCCGGTTCATCCCCGTGGGCACGGGGAACACGCATCATCTTCAATGGTCCAGTAGTCTGAACACGGTTCATCCCCGTGGGCACGGGGAACACCCCTTTGTACACTCGCTGAGGCATCCATTGATCGGTTCATCCCCGTGGGCACGGGGAACACGGCCTTTCACGCCTCTAACTCCTTCCATAACGCGGTTCATCCCCGTGGGCACGGGGAACACTTAGCTATCAAAGCCTGGCTACAACTAAATAACGGTTCATCCCCGTGGGCACGGGGAACACACCGTCTTGGTATGGTTTAAATATACGCCTCCCGGTTCATCCCCGTGGGCACGGGGAACACATATTCACGTAATTGAGCCGCTTGTTTCTAATCGGTTCATCCCCGTGGGCACGGGGAACACAATAGAGAGAGGCCCCGAAGGATCTCCCGATGCGGTTCATCCCCGTGGGCACGGGGAACACTGTGTGGCGCTTACTGGTTTGCGCCGGTTTCGCGGTTCATCCCCGTGGGCACGGGGAACACTTGTTAACGGTTAACTCGCCTTCTACTTCGCGCGGTTCATCCCCGTGGGCACGGGGAACACGCTTGAATACCATGATGATGAAACGGCGATCACGGTTCATCCCCGTGGGCACGGGGAACACCTAAAATCTGCTGCAGAACTCTTTTGGCGCGCCGGTTCATCCCCGTGGGCACGGGGAACACTAACTATTACGAAGCGCTGGAGTTTGCTAAAACGGTTCATCCCCGTGGGCACGGGGAACACGAAGACATTGTAAAGTCCATTCAGTTGCCAGGCGGTTCATCCCCGTGGGCACGGGGAACACTAATAGACCTGGCTAAAACTATCTGCTGGTTGCGGTTCATCCCCGTGGGCACGGGGAACACGCTTGAAAAATATGATTCAAGTGGTTCATTATCGGTTCATCCCCGTGGGCACGGGGAACACTCCTGAACCACCCACCTCAATAGAGCCCGACGCGGTTCATCCCCGTGGGCACGGGGAACACCTGGTCCTGCCATTTACGTGTCTGGAGTTTTCCGGTTCATCCCCGTGGGCACGGGGAACACCACTTAGGACAAAAGAAGCGGCTTCAGATAACCGGTTCATCCCCGTGGGCACGGGGAACACTCACACGATTGGTCGCAACCACCATTCAAGCCCGGTTCATCCCCGTGGGCACGGGGAACACCCAGACTCACGTAGGTCTGAGTTGATTGGACGCGGTTCATCCCCGTGGGCACGGGGAACACGCCCGGCTTTATAACGGCTCTGGCGTTTATAACGGTTCATCCCCGTGGGCACGGGGAACACTTTGGAAGAAAACCGCTAAGGTACTCGATGAACGGTTCATCCCCGTGGGCACGGGGAACACCCAGAACGCGGCAGCATTGAACACTTAAAAACCGGTTCATCCCCGTGGGCACGGGGAACACTAAGTGATTTAAGGATAAGGCGTGACGGAACGCGGTTCATCCCCGTGGGCACGGGGAACACAATGGCGTGAAACTACTAACAGTGGCATTACGCGGTTCATCCCCGTGGGCACGGGGAACACAACTTCCAAGCCTGACCCTGCTGACAATTCAACGGTTCATCCCCGTGGGCACGGGGAACACCGGTGCCTGGACCACGCTTCAAGTATCTCATGCGGTTCATCCCCGTGGGCACGGGGAACACTGAAGAAGTCGTTCGTTCTCCTGCTGGTTGCGCGGTTCATCCCCGTGGGCACGGGGAACACTTAAAAGTACGTTAAATGCCATATTTGGTCCGCGGTTCATCCCCGTGGGCACGGGGAACACTGGCATACTATTGAATATACCTCGTTTAATCTCGGTTCATCCCCGTGGGCACGGGGAACACCTGTTGAATATTCTAAAGCTAATTTATACGAGCGGTTCATCCCCGTGGGCACGGGGAACACCCGCCGAAGCCCATTCCGTCAATCTGTTTTGACGGTTCATCCCCGTGGGCACGGGGAACACGCTGGTTTTAACAATGTCGTCAAGGTCATGGCCGGTTCATCCCCGTGGGCACGGGGAACACTGCATGCGTTACGTTGAACCATTGCATTTCTGCGGTTCATCCCCGTGGGCACGGGGAACACCGGTCGGTATGGCAGGTCGTCCACTTCCTGAGCGGTTCATCCCCGTGGGCACGGGGAACACTTCGTAAATGGTAACGGGGCCATTCATCCAGCCGGTTCATCCCCGTGGGCACGGGGAACACACGTAGCGACTGTTGGGTTCGGTGGCGGTCAACGGTTCATCCCCGTGGGCACGGGGAACACTAGCAAATGTTCATTTAAACCACCCTCTAACACGGTTCATCCCCGTGGGCACGGGGAACACCACTTTGAACTCAGTACCATCAACAGACCAGCCGGTTCATCCCCGTGGGCACGGGGAACACAGCGTCAGCGGTCAATCCAACCTGTGGCGCAACGGTTCATCCCCGTGGGCACGGGGAACACTTCTTTAATTTTGCGCGATAAATTGCGAGACCCGGTTCATCCCCGTGGGCACGGGGAACACTTACCAACATACCTACTAAGCAACCCCATAGCCGGTTCATCCCCGTGGGCACGGGGAACACGCGGCGCTCATTAAATTGGGTGCCAATCTTTACGGTTCATCCCCGTGGGCACGGGGAACACGCCCTCCTGCCATCTCTAGAGACATAGAAGCTCGGTTCATCCCCGTGGGCACGGGGAACACCAGATGCTATTGCTGCCACTGCAGGGGGAAGGCGGTTCATCCCCGTGGGCACGGGGAACACACCTGGGGGCTTACCTTGAAGTTGATCTTTCACGGTTCATCCCCGTGGGCACGGGGAACACCCATTTGTTTTGGTGCCACTTTTCACGCAATTCGGTTCATCCCCGTGGGCACGGGGAACACGAGATTGAAGCGAGTGAAGCGGGATTCCAGCGCGGTTCATCCCCGTGGGCACGGGGAACAC

>NC_011138|2|2|3208645-3212029|CRISPRCasFinder
TGGTTCATCCCCGTGGGCACGGGGAACAC	TCTCAATCAGGAAATCTTTGATGAACTCTAAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	GACCCGCCACCAACATCTACACGCTGGCCTGA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CGATTTCGGCTCCTTTTTATAGCGAACCATATC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TCAGGTTGAAGTAACAACATAACACTGTTGCG
CGGTTCATCCCCGTGGGCACGGGGAACAC	CTTTCAATGGCACGAAGAGTCTCACCTGTACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCAAAAAGAAAGGCCCGCAAGAGGAAATGCTA
CGGTTCATCCCCGTGGGCACGGGGAACAC	ACACATACGTGATATTCGCGTTTAATCACTGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCATCATCTTCAATGGTCCAGTAGTCTGAACA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCCTTTGTACACTCGCTGAGGCATCCATTGAT
CGGTTCATCCCCGTGGGCACGGGGAACAC	GGCCTTTCACGCCTCTAACTCCTTCCATAACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTAGCTATCAAAGCCTGGCTACAACTAAATAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	ACCGTCTTGGTATGGTTTAAATATACGCCTCC
CGGTTCATCCCCGTGGGCACGGGGAACAC	ATATTCACGTAATTGAGCCGCTTGTTTCTAAT
CGGTTCATCCCCGTGGGCACGGGGAACAC	AATAGAGAGAGGCCCCGAAGGATCTCCCGATG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TGTGTGGCGCTTACTGGTTTGCGCCGGTTTCG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTGTTAACGGTTAACTCGCCTTCTACTTCGCG
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCTTGAATACCATGATGATGAAACGGCGATCA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CTAAAATCTGCTGCAGAACTCTTTTGGCGCGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TAACTATTACGAAGCGCTGGAGTTTGCTAAAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	GAAGACATTGTAAAGTCCATTCAGTTGCCAGG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TAATAGACCTGGCTAAAACTATCTGCTGGTTG
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCTTGAAAAATATGATTCAAGTGGTTCATTAT
CGGTTCATCCCCGTGGGCACGGGGAACAC	TCCTGAACCACCCACCTCAATAGAGCCCGACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	CTGGTCCTGCCATTTACGTGTCTGGAGTTTTC
CGGTTCATCCCCGTGGGCACGGGGAACAC	CACTTAGGACAAAAGAAGCGGCTTCAGATAAC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TCACACGATTGGTCGCAACCACCATTCAAGCC
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCAGACTCACGTAGGTCTGAGTTGATTGGACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCCCGGCTTTATAACGGCTCTGGCGTTTATAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTTGGAAGAAAACCGCTAAGGTACTCGATGAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCAGAACGCGGCAGCATTGAACACTTAAAAAC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TAAGTGATTTAAGGATAAGGCGTGACGGAACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	AATGGCGTGAAACTACTAACAGTGGCATTACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	AACTTCCAAGCCTGACCCTGCTGACAATTCAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CGGTGCCTGGACCACGCTTCAAGTATCTCATG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TGAAGAAGTCGTTCGTTCTCCTGCTGGTTGCG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTAAAAGTACGTTAAATGCCATATTTGGTCCG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TGGCATACTATTGAATATACCTCGTTTAATCT
CGGTTCATCCCCGTGGGCACGGGGAACAC	CTGTTGAATATTCTAAAGCTAATTTATACGAG
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCGCCGAAGCCCATTCCGTCAATCTGTTTTGA
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCTGGTTTTAACAATGTCGTCAAGGTCATGGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TGCATGCGTTACGTTGAACCATTGCATTTCTG
CGGTTCATCCCCGTGGGCACGGGGAACAC	CGGTCGGTATGGCAGGTCGTCCACTTCCTGAG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTCGTAAATGGTAACGGGGCCATTCATCCAGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	ACGTAGCGACTGTTGGGTTCGGTGGCGGTCAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	TAGCAAATGTTCATTTAAACCACCCTCTAACA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CACTTTGAACTCAGTACCATCAACAGACCAGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	AGCGTCAGCGGTCAATCCAACCTGTGGCGCAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTCTTTAATTTTGCGCGATAAATTGCGAGACC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTACCAACATACCTACTAAGCAACCCCATAGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCGGCGCTCATTAAATTGGGTGCCAATCTTTA
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCCCTCCTGCCATCTCTAGAGACATAGAAGCT
CGGTTCATCCCCGTGGGCACGGGGAACAC	CAGATGCTATTGCTGCCACTGCAGGGGGAAGG
CGGTTCATCCCCGTGGGCACGGGGAACAC	ACCTGGGGGCTTACCTTGAAGTTGATCTTTCA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCATTTGTTTTGGTGCCACTTTTCACGCAATT
CGGTTCATCCCCGTGGGCACGGGGAACAC	GAGATTGAAGCGAGTGAAGCGGGATTCCAGCG
CGGTTCATCCCCGTGGGCACGGGGAACAC

>NC_011138|2|1|3208645-3212029|CRT
TGGTTCATCCCCGTGGGCACGGGGAACAC	TCTCAATCAGGAAATCTTTGATGAACTCTAAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	GACCCGCCACCAACATCTACACGCTGGCCTGA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CGATTTCGGCTCCTTTTTATAGCGAACCATATC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TCAGGTTGAAGTAACAACATAACACTGTTGCG
CGGTTCATCCCCGTGGGCACGGGGAACAC	CTTTCAATGGCACGAAGAGTCTCACCTGTACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCAAAAAGAAAGGCCCGCAAGAGGAAATGCTA
CGGTTCATCCCCGTGGGCACGGGGAACAC	ACACATACGTGATATTCGCGTTTAATCACTGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCATCATCTTCAATGGTCCAGTAGTCTGAACA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCCTTTGTACACTCGCTGAGGCATCCATTGAT
CGGTTCATCCCCGTGGGCACGGGGAACAC	GGCCTTTCACGCCTCTAACTCCTTCCATAACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTAGCTATCAAAGCCTGGCTACAACTAAATAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	ACCGTCTTGGTATGGTTTAAATATACGCCTCC
CGGTTCATCCCCGTGGGCACGGGGAACAC	ATATTCACGTAATTGAGCCGCTTGTTTCTAAT
CGGTTCATCCCCGTGGGCACGGGGAACAC	AATAGAGAGAGGCCCCGAAGGATCTCCCGATG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TGTGTGGCGCTTACTGGTTTGCGCCGGTTTCG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTGTTAACGGTTAACTCGCCTTCTACTTCGCG
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCTTGAATACCATGATGATGAAACGGCGATCA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CTAAAATCTGCTGCAGAACTCTTTTGGCGCGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TAACTATTACGAAGCGCTGGAGTTTGCTAAAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	GAAGACATTGTAAAGTCCATTCAGTTGCCAGG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TAATAGACCTGGCTAAAACTATCTGCTGGTTG
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCTTGAAAAATATGATTCAAGTGGTTCATTAT
CGGTTCATCCCCGTGGGCACGGGGAACAC	TCCTGAACCACCCACCTCAATAGAGCCCGACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	CTGGTCCTGCCATTTACGTGTCTGGAGTTTTC
CGGTTCATCCCCGTGGGCACGGGGAACAC	CACTTAGGACAAAAGAAGCGGCTTCAGATAAC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TCACACGATTGGTCGCAACCACCATTCAAGCC
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCAGACTCACGTAGGTCTGAGTTGATTGGACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCCCGGCTTTATAACGGCTCTGGCGTTTATAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTTGGAAGAAAACCGCTAAGGTACTCGATGAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCAGAACGCGGCAGCATTGAACACTTAAAAAC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TAAGTGATTTAAGGATAAGGCGTGACGGAACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	AATGGCGTGAAACTACTAACAGTGGCATTACG
CGGTTCATCCCCGTGGGCACGGGGAACAC	AACTTCCAAGCCTGACCCTGCTGACAATTCAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CGGTGCCTGGACCACGCTTCAAGTATCTCATG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TGAAGAAGTCGTTCGTTCTCCTGCTGGTTGCG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTAAAAGTACGTTAAATGCCATATTTGGTCCG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TGGCATACTATTGAATATACCTCGTTTAATCT
CGGTTCATCCCCGTGGGCACGGGGAACAC	CTGTTGAATATTCTAAAGCTAATTTATACGAG
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCGCCGAAGCCCATTCCGTCAATCTGTTTTGA
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCTGGTTTTAACAATGTCGTCAAGGTCATGGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TGCATGCGTTACGTTGAACCATTGCATTTCTG
CGGTTCATCCCCGTGGGCACGGGGAACAC	CGGTCGGTATGGCAGGTCGTCCACTTCCTGAG
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTCGTAAATGGTAACGGGGCCATTCATCCAGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	ACGTAGCGACTGTTGGGTTCGGTGGCGGTCAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	TAGCAAATGTTCATTTAAACCACCCTCTAACA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CACTTTGAACTCAGTACCATCAACAGACCAGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	AGCGTCAGCGGTCAATCCAACCTGTGGCGCAA
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTCTTTAATTTTGCGCGATAAATTGCGAGACC
CGGTTCATCCCCGTGGGCACGGGGAACAC	TTACCAACATACCTACTAAGCAACCCCATAGC
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCGGCGCTCATTAAATTGGGTGCCAATCTTTA
CGGTTCATCCCCGTGGGCACGGGGAACAC	GCCCTCCTGCCATCTCTAGAGACATAGAAGCT
CGGTTCATCCCCGTGGGCACGGGGAACAC	CAGATGCTATTGCTGCCACTGCAGGGGGAAGG
CGGTTCATCCCCGTGGGCACGGGGAACAC	ACCTGGGGGCTTACCTTGAAGTTGATCTTTCA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCATTTGTTTTGGTGCCACTTTTCACGCAATT
CGGTTCATCCCCGTGGGCACGGGGAACAC	GAGATTGAAGCGAGTGAAGCGGGATTCCAGCG
CGGTTCATCCCCGTGGGCACGGGGAACAC

>NC_011138|2|1|3208646-3211602|PILER-CR
GGTTCATCCCCGTGGGCACGGGGAACACT	CTCAATCAGGAAATCTTTGATGAACTCTAAAC
GGTTCATCCCCGTGGGCACGGGGAACACG	ACCCGCCACCAACATCTACACGCTGGCCTGAC
GGTTCATCCCCGTGGGCACGGGGAACACC	GATTTCGGCTCCTTTTTATAGCGAACCATATCC
GGTTCATCCCCGTGGGCACGGGGAACACT	CAGGTTGAAGTAACAACATAACACTGTTGCGC
GGTTCATCCCCGTGGGCACGGGGAACACC	TTTCAATGGCACGAAGAGTCTCACCTGTACGC
GGTTCATCCCCGTGGGCACGGGGAACACG	CAAAAAGAAAGGCCCGCAAGAGGAAATGCTAC
GGTTCATCCCCGTGGGCACGGGGAACACA	CACATACGTGATATTCGCGTTTAATCACTGCC
GGTTCATCCCCGTGGGCACGGGGAACACG	CATCATCTTCAATGGTCCAGTAGTCTGAACAC
GGTTCATCCCCGTGGGCACGGGGAACACC	CCTTTGTACACTCGCTGAGGCATCCATTGATC
GGTTCATCCCCGTGGGCACGGGGAACACG	GCCTTTCACGCCTCTAACTCCTTCCATAACGC
GGTTCATCCCCGTGGGCACGGGGAACACT	TAGCTATCAAAGCCTGGCTACAACTAAATAAC
GGTTCATCCCCGTGGGCACGGGGAACACA	CCGTCTTGGTATGGTTTAAATATACGCCTCCC
GGTTCATCCCCGTGGGCACGGGGAACACA	TATTCACGTAATTGAGCCGCTTGTTTCTAATC
GGTTCATCCCCGTGGGCACGGGGAACACA	ATAGAGAGAGGCCCCGAAGGATCTCCCGATGC
GGTTCATCCCCGTGGGCACGGGGAACACT	GTGTGGCGCTTACTGGTTTGCGCCGGTTTCGC
GGTTCATCCCCGTGGGCACGGGGAACACT	TGTTAACGGTTAACTCGCCTTCTACTTCGCGC
GGTTCATCCCCGTGGGCACGGGGAACACG	CTTGAATACCATGATGATGAAACGGCGATCAC
GGTTCATCCCCGTGGGCACGGGGAACACC	TAAAATCTGCTGCAGAACTCTTTTGGCGCGCC
GGTTCATCCCCGTGGGCACGGGGAACACT	AACTATTACGAAGCGCTGGAGTTTGCTAAAAC
GGTTCATCCCCGTGGGCACGGGGAACACG	AAGACATTGTAAAGTCCATTCAGTTGCCAGGC
GGTTCATCCCCGTGGGCACGGGGAACACT	AATAGACCTGGCTAAAACTATCTGCTGGTTGC
GGTTCATCCCCGTGGGCACGGGGAACACG	CTTGAAAAATATGATTCAAGTGGTTCATTATC
GGTTCATCCCCGTGGGCACGGGGAACACT	CCTGAACCACCCACCTCAATAGAGCCCGACGC
GGTTCATCCCCGTGGGCACGGGGAACACC	TGGTCCTGCCATTTACGTGTCTGGAGTTTTCC
GGTTCATCCCCGTGGGCACGGGGAACACC	ACTTAGGACAAAAGAAGCGGCTTCAGATAACC
GGTTCATCCCCGTGGGCACGGGGAACACT	CACACGATTGGTCGCAACCACCATTCAAGCCC
GGTTCATCCCCGTGGGCACGGGGAACACC	CAGACTCACGTAGGTCTGAGTTGATTGGACGC
GGTTCATCCCCGTGGGCACGGGGAACACG	CCCGGCTTTATAACGGCTCTGGCGTTTATAAC
GGTTCATCCCCGTGGGCACGGGGAACACT	TTGGAAGAAAACCGCTAAGGTACTCGATGAAC
GGTTCATCCCCGTGGGCACGGGGAACACC	CAGAACGCGGCAGCATTGAACACTTAAAAACC
GGTTCATCCCCGTGGGCACGGGGAACACT	AAGTGATTTAAGGATAAGGCGTGACGGAACGC
GGTTCATCCCCGTGGGCACGGGGAACACA	ATGGCGTGAAACTACTAACAGTGGCATTACGC
GGTTCATCCCCGTGGGCACGGGGAACACA	ACTTCCAAGCCTGACCCTGCTGACAATTCAAC
GGTTCATCCCCGTGGGCACGGGGAACACC	GGTGCCTGGACCACGCTTCAAGTATCTCATGC
GGTTCATCCCCGTGGGCACGGGGAACACT	GAAGAAGTCGTTCGTTCTCCTGCTGGTTGCGC
GGTTCATCCCCGTGGGCACGGGGAACACT	TAAAAGTACGTTAAATGCCATATTTGGTCCGC
GGTTCATCCCCGTGGGCACGGGGAACACT	GGCATACTATTGAATATACCTCGTTTAATCTC
GGTTCATCCCCGTGGGCACGGGGAACACC	TGTTGAATATTCTAAAGCTAATTTATACGAGC
GGTTCATCCCCGTGGGCACGGGGAACACC	CGCCGAAGCCCATTCCGTCAATCTGTTTTGAC
GGTTCATCCCCGTGGGCACGGGGAACACG	CTGGTTTTAACAATGTCGTCAAGGTCATGGCC
GGTTCATCCCCGTGGGCACGGGGAACACT	GCATGCGTTACGTTGAACCATTGCATTTCTGC
GGTTCATCCCCGTGGGCACGGGGAACACC	GGTCGGTATGGCAGGTCGTCCACTTCCTGAGC
GGTTCATCCCCGTGGGCACGGGGAACACT	TCGTAAATGGTAACGGGGCCATTCATCCAGCC
GGTTCATCCCCGTGGGCACGGGGAACACA	CGTAGCGACTGTTGGGTTCGGTGGCGGTCAAC
GGTTCATCCCCGTGGGCACGGGGAACACT	AGCAAATGTTCATTTAAACCACCCTCTAACAC
GGTTCATCCCCGTGGGCACGGGGAACACC	ACTTTGAACTCAGTACCATCAACAGACCAGCC
GGTTCATCCCCGTGGGCACGGGGAACACA	GCGTCAGCGGTCAATCCAACCTGTGGCGCAAC
GGTTCATCCCCGTGGGCACGGGGAACACT	TCTTTAATTTTGCGCGATAAATTGCGAGACCC
GGTTCATCCCCGTGGGCACGGGGAACACTTACCAACATACCTACTAAGCAACCCCATAGCCGGTTCATCCCCGTGGGCACGGGGAACACGCGGCGCTCATTAAATTGGGTGCCAATCTTTACGGTTCATCCCCGTGGGCACGGGGAACAC	GCCCTCCTGCCATCTCTAGAGACATAGAAGCT
CGGTTCATCCCCGTGGGCACGGGGAACAC	CAGATGCTATTGCTGCCACTGCAGGGGGAAGG
CGGTTCATCCCCGTGGGCACGGGGAACAC	ACCTGGGGGCTTACCTTGAAGTTGATCTTTCA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCATTTGTTTTGGTGCCACTTTTCACGCAATT
CGGTTCATCCCCGTGGGCACGGGGAACAC	GAGATTGAAGCGAGTGAAGCGGGATTCCAGCG


>NC_011138|2|2|3211696-3212029|PILER-CR
	CTCAATCAGGAAATCTTTGATGAACTCTAAAC
GGTTCATCCCCGTGGGCACGGGGAACACG	ACCCGCCACCAACATCTACACGCTGGCCTGAC
GGTTCATCCCCGTGGGCACGGGGAACACC	GATTTCGGCTCCTTTTTATAGCGAACCATATCC
GGTTCATCCCCGTGGGCACGGGGAACACT	CAGGTTGAAGTAACAACATAACACTGTTGCGC
GGTTCATCCCCGTGGGCACGGGGAACACC	TTTCAATGGCACGAAGAGTCTCACCTGTACGC
GGTTCATCCCCGTGGGCACGGGGAACACG	CAAAAAGAAAGGCCCGCAAGAGGAAATGCTAC
GGTTCATCCCCGTGGGCACGGGGAACACA	CACATACGTGATATTCGCGTTTAATCACTGCC
GGTTCATCCCCGTGGGCACGGGGAACACG	CATCATCTTCAATGGTCCAGTAGTCTGAACAC
GGTTCATCCCCGTGGGCACGGGGAACACC	CCTTTGTACACTCGCTGAGGCATCCATTGATC
GGTTCATCCCCGTGGGCACGGGGAACACG	GCCTTTCACGCCTCTAACTCCTTCCATAACGC
GGTTCATCCCCGTGGGCACGGGGAACACT	TAGCTATCAAAGCCTGGCTACAACTAAATAAC
GGTTCATCCCCGTGGGCACGGGGAACACA	CCGTCTTGGTATGGTTTAAATATACGCCTCCC
GGTTCATCCCCGTGGGCACGGGGAACACA	TATTCACGTAATTGAGCCGCTTGTTTCTAATC
GGTTCATCCCCGTGGGCACGGGGAACACA	ATAGAGAGAGGCCCCGAAGGATCTCCCGATGC
GGTTCATCCCCGTGGGCACGGGGAACACT	GTGTGGCGCTTACTGGTTTGCGCCGGTTTCGC
GGTTCATCCCCGTGGGCACGGGGAACACT	TGTTAACGGTTAACTCGCCTTCTACTTCGCGC
GGTTCATCCCCGTGGGCACGGGGAACACG	CTTGAATACCATGATGATGAAACGGCGATCAC
GGTTCATCCCCGTGGGCACGGGGAACACC	TAAAATCTGCTGCAGAACTCTTTTGGCGCGCC
GGTTCATCCCCGTGGGCACGGGGAACACT	AACTATTACGAAGCGCTGGAGTTTGCTAAAAC
GGTTCATCCCCGTGGGCACGGGGAACACG	AAGACATTGTAAAGTCCATTCAGTTGCCAGGC
GGTTCATCCCCGTGGGCACGGGGAACACT	AATAGACCTGGCTAAAACTATCTGCTGGTTGC
GGTTCATCCCCGTGGGCACGGGGAACACG	CTTGAAAAATATGATTCAAGTGGTTCATTATC
GGTTCATCCCCGTGGGCACGGGGAACACT	CCTGAACCACCCACCTCAATAGAGCCCGACGC
GGTTCATCCCCGTGGGCACGGGGAACACC	TGGTCCTGCCATTTACGTGTCTGGAGTTTTCC
GGTTCATCCCCGTGGGCACGGGGAACACC	ACTTAGGACAAAAGAAGCGGCTTCAGATAACC
GGTTCATCCCCGTGGGCACGGGGAACACT	CACACGATTGGTCGCAACCACCATTCAAGCCC
GGTTCATCCCCGTGGGCACGGGGAACACC	CAGACTCACGTAGGTCTGAGTTGATTGGACGC
GGTTCATCCCCGTGGGCACGGGGAACACG	CCCGGCTTTATAACGGCTCTGGCGTTTATAAC
GGTTCATCCCCGTGGGCACGGGGAACACT	TTGGAAGAAAACCGCTAAGGTACTCGATGAAC
GGTTCATCCCCGTGGGCACGGGGAACACC	CAGAACGCGGCAGCATTGAACACTTAAAAACC
GGTTCATCCCCGTGGGCACGGGGAACACT	AAGTGATTTAAGGATAAGGCGTGACGGAACGC
GGTTCATCCCCGTGGGCACGGGGAACACA	ATGGCGTGAAACTACTAACAGTGGCATTACGC
GGTTCATCCCCGTGGGCACGGGGAACACA	ACTTCCAAGCCTGACCCTGCTGACAATTCAAC
GGTTCATCCCCGTGGGCACGGGGAACACC	GGTGCCTGGACCACGCTTCAAGTATCTCATGC
GGTTCATCCCCGTGGGCACGGGGAACACT	GAAGAAGTCGTTCGTTCTCCTGCTGGTTGCGC
GGTTCATCCCCGTGGGCACGGGGAACACT	TAAAAGTACGTTAAATGCCATATTTGGTCCGC
GGTTCATCCCCGTGGGCACGGGGAACACT	GGCATACTATTGAATATACCTCGTTTAATCTC
GGTTCATCCCCGTGGGCACGGGGAACACC	TGTTGAATATTCTAAAGCTAATTTATACGAGC
GGTTCATCCCCGTGGGCACGGGGAACACC	CGCCGAAGCCCATTCCGTCAATCTGTTTTGAC
GGTTCATCCCCGTGGGCACGGGGAACACG	CTGGTTTTAACAATGTCGTCAAGGTCATGGCC
GGTTCATCCCCGTGGGCACGGGGAACACT	GCATGCGTTACGTTGAACCATTGCATTTCTGC
GGTTCATCCCCGTGGGCACGGGGAACACC	GGTCGGTATGGCAGGTCGTCCACTTCCTGAGC
GGTTCATCCCCGTGGGCACGGGGAACACT	TCGTAAATGGTAACGGGGCCATTCATCCAGCC
GGTTCATCCCCGTGGGCACGGGGAACACA	CGTAGCGACTGTTGGGTTCGGTGGCGGTCAAC
GGTTCATCCCCGTGGGCACGGGGAACACT	AGCAAATGTTCATTTAAACCACCCTCTAACAC
GGTTCATCCCCGTGGGCACGGGGAACACC	ACTTTGAACTCAGTACCATCAACAGACCAGCC
GGTTCATCCCCGTGGGCACGGGGAACACA	GCGTCAGCGGTCAATCCAACCTGTGGCGCAAC
GGTTCATCCCCGTGGGCACGGGGAACACT	TCTTTAATTTTGCGCGATAAATTGCGAGACCC
GGTTCATCCCCGTGGGCACGGGGAACACTTACCAACATACCTACTAAGCAACCCCATAGCCGGTTCATCCCCGTGGGCACGGGGAACACGCGGCGCTCATTAAATTGGGTGCCAATCTTTACGGTTCATCCCCGTGGGCACGGGGAACAC	GCCCTCCTGCCATCTCTAGAGACATAGAAGCT
CGGTTCATCCCCGTGGGCACGGGGAACAC	CAGATGCTATTGCTGCCACTGCAGGGGGAAGG
CGGTTCATCCCCGTGGGCACGGGGAACAC	ACCTGGGGGCTTACCTTGAAGTTGATCTTTCA
CGGTTCATCCCCGTGGGCACGGGGAACAC	CCATTTGTTTTGGTGCCACTTTTCACGCAATT
CGGTTCATCCCCGTGGGCACGGGGAACAC	GAGATTGAAGCGAGTGAAGCGGGATTCCAGCG
CGGTTCATCCCCGTGGGCACGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011138.3\|WP_020744081.1\|3199881_3201156_-\|urea-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|372603
NC_011138.3\|WP_012519304.1\|3214175_3214844_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|187858
NC_011138.3\|WP_012519310.1\|3221710_3222547_-\|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NC_011138.3\|WP_012519307.1\|3216671_3217241_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	pfam09485_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NC_011138.3\|WP_012519302.1\|3212410_3213331_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_011138.3\|WP_012519291.1\|3201191_3202187_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|369446
NC_011138.3\|WP_012519308.1\|3217240_3218848_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NC_011138.3\|WP_012519294.1\|3206894_3208406_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NC_011138.3\|WP_012519292.1\|3202434_3205800_+\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NC_011138.3\|WP_012519288.1\|3196856_3198035_-\|urea-ABC-transporter-permease-subunit-UrtC	unknown	unknown	gnl\|CDD\|132449
NC_011138.3\|WP_012519305.1\|3214843_3215575_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NC_011138.3\|WP_012519289.1\|3198034_3199705_-\|urea-ABC-transporter-permease-subunit-UrtB	unknown	unknown	gnl\|CDD\|200272
NC_011138.3\|WP_012519293.1\|3205792_3206689_+\|response-regulator	unknown	unknown	gnl\|CDD\|381147
NC_011138.3\|WP_012519301.1\|3212102_3212405_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NC_011138.3\|WP_023559825.1\|3194324_3195287_-\|urease-accessory-protein-UreD	unknown	unknown	gnl\|CDD\|376611
NC_011138.3\|WP_012519309.1\|3218844_3221592_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NC_011138.3\|WP_012519287.1\|3196029_3196857_-\|urea-ABC-transporter-ATP-binding-protein-UrtD	unknown	unknown	gnl\|CDD\|274568
NC_011138.3\|WP_012519286.1\|3195300_3195996_-\|urea-ABC-transporter-ATP-binding-subunit-UrtE	unknown	unknown	gnl\|CDD\|274567
NC_011138.3\|WP_012519306.1\|3215588_3216626_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NC_011138.3\|WP_012519303.1\|3213333_3214155_-\|KilA-N-domain-containing-protein	unknown	unknown	gnl\|CDD\|367917

Protein	Function_ID	Function_description	E-value
NC_011138.3\|WP_020744081.1\|3199881_3201156_-\|urea-ABC-transporter-substrate-binding-protein	gnl\|CDD\|372603	pfam13433, Peripla_BP_5, Periplasmic binding protein domain. This domain is found in a variety of bacterial periplasmic binding proteins.	0
NC_011138.3\|WP_012519304.1\|3214175_3214844_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	7.29442e-72
NC_011138.3\|WP_012519310.1\|3221710_3222547_-\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	1.11999e-09
NC_011138.3\|WP_012519307.1\|3216671_3217241_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	5.59992e-32
NC_011138.3\|WP_012519302.1\|3212410_3213331_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.18579e-149
NC_011138.3\|WP_012519291.1\|3201191_3202187_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|369446	pfam07642, BBP2, Putative beta-barrel porin-2, OmpL-like. bbp2. BBP2 is a family of putative porin proteins that are likely to be outer membrane beta barrel proteins porins.	1.25706e-05
NC_011138.3\|WP_012519308.1\|3217240_3218848_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	2.0023e-161
NC_011138.3\|WP_012519294.1\|3206894_3208406_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	5.68784e-14
NC_011138.3\|WP_012519292.1\|3202434_3205800_+\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	5.00164e-75
NC_011138.3\|WP_012519288.1\|3196856_3198035_-\|urea-ABC-transporter-permease-subunit-UrtC	gnl\|CDD\|132449	TIGR03408, urea_trans_UrtC, urea ABC transporter, permease protein UrtC. Members of this protein family are ABC transporter permease proteins associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	1.06407e-156
NC_011138.3\|WP_012519305.1\|3214843_3215575_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.14349e-49
NC_011138.3\|WP_012519289.1\|3198034_3199705_-\|urea-ABC-transporter-permease-subunit-UrtB	gnl\|CDD\|200272	TIGR03409, urea_trans_UrtB, urea ABC transporter, permease protein UrtB. Members of this protein family are ABC transporter permease proteins associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	1.63026e-158
NC_011138.3\|WP_012519293.1\|3205792_3206689_+\|response-regulator	gnl\|CDD\|381147	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains. Pseudomonas aeruginosa cyclic di-GMP phosphodiesterase PA4781 contains an N-terminal REC domain and a C-terminal catalytic HD-GYP domain, characteristics of RpfG family response regulators. PA4781 is involved in cyclic di-3',5'-GMP (c-di-GMP) hydrolysis/degradation in a two-step reaction via the linear intermediate pGpG to produce GMP. Its unphosphorylated REC domain prevents accessibility of c-di-GMP to the active site. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.88594e-44
NC_011138.3\|WP_012519301.1\|3212102_3212405_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.91592e-61
NC_011138.3\|WP_023559825.1\|3194324_3195287_-\|urease-accessory-protein-UreD	gnl\|CDD\|376611	pfam01774, UreD, UreD urease accessory protein. UreD is a urease accessory protein. Urease pfam00449 hydrolyzes urea into ammonia and carbamic acid. UreD is involved in activation of the urease enzyme via the UreD-UreF-UreG-urease complex and is required for urease nickel metallocenter assembly. See also UreF pfam01730, UreG pfam01495.	1.25149e-55
NC_011138.3\|WP_012519309.1\|3218844_3221592_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	7.32453e-137
NC_011138.3\|WP_012519287.1\|3196029_3196857_-\|urea-ABC-transporter-ATP-binding-protein-UrtD	gnl\|CDD\|274568	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	1.28313e-156
NC_011138.3\|WP_012519286.1\|3195300_3195996_-\|urea-ABC-transporter-ATP-binding-subunit-UrtE	gnl\|CDD\|274567	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	1.9452e-114
NC_011138.3\|WP_012519306.1\|3215588_3216626_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	3.00164e-120
NC_011138.3\|WP_012519303.1\|3213333_3214155_-\|KilA-N-domain-containing-protein	gnl\|CDD\|367917	pfam04383, KilA-N, KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	1.02053e-15

>NC_011138.3|WP_012519294.1|3206894_3208406_+|Fic-family-protein
MNDISQKLADSLEQLQQLQESGAVAVQSRQLSRVHRERLLKHGFIREVIRGWYIPAMPDEKPGDSTSWYTSFWGFCGAYLSQRFDNAWCLSPEQSISLHIGDRTVPQQLLVRSPKGNNKPTAFLHNTSIFDVRLNMPATEYIENLEGLNVYSLAAALVYSSANQFQNAPIQIRTALSMVTDASDVLSVLLAGNHSVIAGRLVGAFRNIGRDLIADNILKGMQAADFKVQEEDPFAEKVQVNFGRRDVSPYVNRMRLKWAQMRESVIAHFPEQIQQSVDIETYMAEVEDKYVTDAYHSLSIEGYRVTHELIELVRSGNWQAEGSDESKRHLDAMAAKGYWNAFQEVKKAVLAVLEGKNAGDVLEQTHSDWYLALFGPSVAAGIIKQSDLAGYRTGPVYIRQSMHTPPGREAVRDMMPILFDLLAEEKNSAVRVVLGHFIFVYIHPYFDGNGRMGRFVMNLMMASGGYPWTIVPVERRDEYMQALEAASVNQDIVPFTKFLASLV
>NC_011138.3|WP_012519293.1|3205792_3206689_+|response-regulator
MNNISDVVLVVDDSPESLGMLNVALNTQGFTALVALNGVQALAIVEKVKPDVILLDAVMPEMDGFETCKKLKEALPNTPIIFMTGLTEIDDVVKGFDAGGIDYVTKPIAPDEVIARIKTHIQTAKIALSAQSALDSTGSNTFCVSSEGRLSWATPNVHQFIEKICGEDTSPWASISKELAPWLQSENLEESSILTIHSFSSPLQIKYLGVQAPHHLFKIVEPPTSKTHLCLQEKLPITKRESEVLYWISFGKTSWEISQILDMSPRTANKHLEQIYKKLGVDNKTSAAAIALRLLERS
>NC_011138.3|WP_012519292.1|3202434_3205800_+|response-regulator
MQSNQKIIPTRRSYNKLVANEMMEDFALRFTAKKARKWSLNKVAGTALGIVSFLVLEAIGGAATINFGFINVAWAILSVVLVVFLTGTPISYYAAKYGVDIDLLTRGAGFGYIGSTITSLIYASFTFIFFALEAAIMAMALHILFGISLAIGYVISALLVLPLVTHGISYISRFQVWSQPIWVILQLVPLLFVFQHPDSNFKDWIAFTGIGENETEARNFNLLLFGSASAILLSLVAQIGEQVDFLRFLPERPKAGRFKWWLALIAAGPGWIFFGALKLFLGSFLAYFALTQGVDIDLADDPAHMYNLAFSLVFDNPTISLIVACSFVVISQLKINVANAYAGSLAWSNFFSRVTRTHPGRVIWTVFNVVIALLLMELGIYQTIETMLSVYSVLVLSWLSSVVADLIINKPLGISPKHIEFKRSHLYDINPVGIGAMFISSFIGITGHYGWYGETIQALASYLAFFLPFILVPVIGKLTGGKYYLVDNKVAITQTSCVCCICENEFEQEDITFCPAYSGVICSLCCSLDVKCGDICRPEATLFAQSQIFFHRFLSIDLLKALTTPMSQFIALTFALSCVSASILYLVYLQVPSTSGANVLFADMLIKIFFLLSIIVGILSWLFVLARNANKIALKELRSQASALADEIGAHEVTSIALEKAKNAAEAANEAKSRYLAGLSHELRTPLNVMLGYSQLLGKDVSLSEKQRDTMGIMRRNGEHLANLIEGLLEISKIEAGRLTLHRDEFNIRAILKQLIDMFELQASNKGLNFHTNISTKLPDVVVGDKQRLRQILINLISNAIKYTEAGHVKFDVQYRNEVAIFVVVDTGSGISEAHKETIFQPFEQIRNTHTQAIGGTGLGLTISRSLTELMGGELSFKSLLGKGSTFTLRLMLPRITQNQTTPENHSQHVCAYSGTRKTILVIDNEPHQQQLLKDVLTPLGFIVLLAENEKKTFSQLESHHIDLITLDVKLSNASGWDLLSTLRMDNWLMPVLMVSANARELEQYTAHTKLHNGYISKPFNLDNLFNQIGQLLALNWEYSPDKTESITQIEKQQRTPVTSDHYRELITLAEIGYLSGFNSKLTEIETHHYFSPDVESNIKQHISQCNFPEIIRYLGECIHE
>NC_011138.3|WP_012519291.1|3201191_3202187_-|outer-membrane-beta-barrel-protein
MKLAQTLKPAAAVGFIALSLTGTAHADDKFKLTDSLSVTGFIDMSWSSVDVEGVGTEQSSGLDQFEIDFLYSFDSKFSAQVDLEYQDNGTGEEVDIEQAFISYAVSENFSVKAGRFLSYTGWETEEPTGLYQYSGTGYAAYFYGGYQQGVSGFYKGNGYQVALSLVNDLGDLEGENRDTDHPAFEAMLAVTPTEATIAKAFYSSDKLDGTDETTTLVNLWAAYIEGSLTLAVEYNTSENAPAYAYRYGIDSEASGYLIMGNYAMNDFAITLRYHDYAIDDASGAEVEDGSAITIAPSYTFTKNLWVVFEYRMGEQNGVDVDLMALEALVTF
>NC_011138.3|WP_020744081.1|3199881_3201156_-|urea-ABC-transporter-substrate-binding-protein
MKFKKIALASTIIVSTFCSQIVLAADTIKVGVLHSLSGTMAISETTLKDTVLMMIEEQNKAGGILGKKLEAVVVDPASNWPLFAEKTRELLAQEKVDVIFGCWTSVSRKSVLPVIEELNGLLFYPVQYEGEESSKNVFYTGAAPNQQAIPAVDYLMNDIGATRWVLAGTDYVYPRTTNKILKEYLNAKGVKDEDILINYTPFGHSDWQGIVSEIKKFGSTGKKTAVVSTINGDANIPFYKELGNQGISAEDIPVVAFSVGEEELSGFDAAPLVGHLAAWNYFQSVESDENDEFIEGWQRYIGDDERVTNDPMEATYIGFKMWAKAVEKAGTTDVDEVEQAMIGIAVPNLTGSIAVMNANHHLSKPVLIGEIQEDGQFEVVWETPDTVIGDAWSDFLPSSKNLMSDWTAPLRCGNFDVTTGKCSG
>NC_011138.3|WP_012519289.1|3198034_3199705_-|urea-ABC-transporter-permease-subunit-UrtB
MIRTHTRWVSWLFICLICLCKAPVYAQTADVQTVQPSNENDAALYSLAAKLPSAKLNQMESLVTEISQVLHPKTREILSLVLNGDLYYIKSNRLLVAAIKVGKEYELTDVLHDSELASVKKSKIRKVRTNNRLRGLIRSAIAVLDLNSPNKDVRLQAVKQLLDNPSTMGLDAITLRLDKEEDPEVSELMNVVLSLNQLKTGEHQAKLVAVSDLESSLQPEVRNTMANILRELPQSQRNAQEAELAAALNEVIKNIDAKRSRYGFIENVFFGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMIMLGAYTTYVIQITFPSLIEYSLLMAIPAAFLVSGFVGVLIERGVIRFLKGRPLETLLATFGVSLILQQLVRTVFSPLNRQVQAPEWMTGSWVINPVFSLTYNRLYIIIFSLVVFFTLMLILKKSSLGLHVRAVSQNRDMARALSIKSDWVDAATFGLGSGIAGVAGVVLSQLTNVGPNLGQAYIIDSFLVVVFGGVGNLWGTLVAAMSLGTINKFLEPITGSVLANIIVLVGLVLFIQKRPKGLFPQKGRSAD
>NC_011138.3|WP_012519288.1|3196856_3198035_-|urea-ABC-transporter-permease-subunit-UrtC
MTILSNVFQEKFKALSNLHVVVSVLFLSTAYVTFCNLVFADGALLHVSDYTVSLLGKYLCYALLALAVDLVWGYCGVLSLGHGAFFTLGGYAMGMYLMRQIGDRGVYGNPDLPDFMVFLNWTEIPWFWAGSSSAIWMVVMVFLGPGLLAFIFGTLAFRSRVSGVYLSIMTQAMTYALMLAFFRNEMGFGGNNGLTDFKEIFSFSLQNPSTKLALFVATAIALAVGYAISHFIVSSKMGRVITATRDAESRVRFVGYKPEHYKVWIFVVSAMLAGLAGALYVPQVGIINPGEFSPLNSIEMVVWVAIGGRCTLYGAIIGAIVVSYAKTRFTAIMPEAWLFALGGLFVLVTLLLPKGIAGLLPNIFDKLSMFNSGPTTSKEEAPYHVGSKKELE
>NC_011138.3|WP_012519287.1|3196029_3196857_-|urea-ABC-transporter-ATP-binding-protein-UrtD
MTTQTTKSPQFANKAPQLVGKHPDTRHGVILYVEDVNLSFDGFKALNNLNLYINKGELRCLIGANGAGKTTLMDVITGKTRPDSGKVNFGQNIDLLGMDESEIALAGIGRKFQKPTVFEALSVFENIELSLAGDKGIWASLFHKLSPEQKDSIDNILRTIGLVNEAYYPAGRLSHGQKQWLEIGMLLAADPKLLLVDEPVAGMTGQETERTAELLTSLAGERSVVVVEHDMAFVRSIARQVTVLHQGSVLAEGTMNDIQSNPEVIRVYLGEETDH
>NC_011138.3|WP_012519286.1|3195300_3195996_-|urea-ABC-transporter-ATP-binding-subunit-UrtE
MIELQNIDQQYSGTQILWDANLKIEKGSRTVIMGRNGVGKTTLLNVIMGLLPISGGKLTINNKDMSKASVESRPEIGVGYVPQGRHIFPQLTVEENLKISLNCKRQTSKTIPEHIFELFPVLKEMLHRRGGDLSGGQQQQLAIARALVLNPDILILDEPNEGIQPNIVQLIRDVLLKLNKEQGLTIVLVEQKLPFARAVGETFALMEKGQVIATGDMPDLNDELVSKYLAV
>NC_011138.3|WP_023559825.1|3194324_3195287_-|urease-accessory-protein-UreD
MDDMKQEFAYEKLSGASSSVNKASAFKGLKNKWLASLFLEFAIKSNVSQLVKTSRRGPLNVQKAFYPEGKDCAHVYLLHPPAGIVSGDELNIEVCIQDSAHALITTPGANRFYRARTNLAIGDSKQTQISNIKVLGKGICENFPLETIVYEGADAINQLDLKLSSQAHYIGWDISCLGLPAAGQPFKKGRFTQLNRVFIDGKLNFHDRINLTPNNNVCAHVAGLNNHSVFATMLAHAPKVRINVNEKSQLVDRLREQIAHTDGIDKPSQKVSVTYIRDLLVVRYLGDHAEECKAIFTSIWKTIRPIYIQKEANVPRIWLT
>NC_011138.3|WP_012519301.1|3212102_3212405_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MTMLTVVTEAVPPRLRGRLAVWLLEVRAGVYVGNVSRRVREMIWYQITELADEGNAVMAWATNNESGFEFQTFGENRREPIDVDGLRLVRFLPIDSDQNS
>NC_011138.3|WP_012519302.1|3212410_3213331_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAFIPLKPIPIKDRNSMIFVGMGRIDVKDGAFVVIDEVNGERMHIPVGSVVCIMLEPGTRVSHAAIKLAAQVGTLLIWVGEAGVRLYAAGQPGGARSDKLLYQAKLALDENLRLKVVRKMFELRFGEPAPERRSVDQLRGIEGARVRKTYELLAKQYSVEWRGRKYDPKDWDKGDVVNQCISAATSCLYGVTEAAILAAGYAPAIGFIHSGKPLSFVYDMADIVKFESVVPEAFKIASKRPRSPDREVRVACRNIFRETKLLNRLIPLIEDVLSAGEITPPEPPRDSQPPVIPEPKNIGNEGHRTG
>NC_011138.3|WP_012519303.1|3213333_3214155_-|KilA-N-domain-containing-protein
MKPKLQALEQTIGTMTQEGVEYICITDIARFKNKDRTGVIIGNWLRNRNTIEFLGIWEQLNKSLFKVIQFDDFKKEGGLNSFTLTPKQWIEKTNAIGLISKAGRYGGTYAQKDIAFEFASWISVEFKLYLIKEFQRLKEQEFEQLGWDIRRNLAKVNYLIHTDAVKEHLIPETLNNQQIACVYATEADLLNVALFGVTAKQWRDKNPQLSGNMRDHANIHQLVCSANMESMNAYFIQQGIKQSERIVKLNQLAIQQMQVLIAANTSKNPLLKE
>NC_011138.3|WP_012519304.1|3214175_3214844_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MFLSKVTMVSSPQTAQELAKLQRNGVYASHQLIWQLFSNVTERSFLYREEMGITGMPEFYVLSKTEPQASLPIFSCVTKVFEPKLKKGQRLSFKLRVNPTVCVKGEDGKQRRHDVMMQAKYNVKDELPDAQTLKMHMEQAAINWLNNEKRLDEWGITLDFQPSIDGYTQHKVQKKRHQIQFSSVDYQGMLTVQDPLKFINQYAKGFGRAKGMGCGLMMIKRA
>NC_011138.3|WP_012519305.1|3214843_3215575_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKEYLVFRLYGPMASWGVPAVGGDRATAIAPTRSALLGLLGAALGITTDNAEKLEALQQSVSFGVKQCVPSSILRDYHTAQVPSEKRGVTHLTRKSELSEAKLNTVLSSRDYRCDGVWVVAVWLRANPQVALSAIKAALEKPVFPLYLGRKSCPLSLPLSPKTIETETLQQALDTDFPPVVSEQSDKYWFGANGFVTYFWEGNATEFDDELTQSYQPWDEPVHRGRWQFKKRTMHQLTLREAK
>NC_011138.3|WP_012519306.1|3215588_3216626_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSKFIQLHLLTSYAPSNLNRDDLGRPKTAKMGGFDRLRVSSQSLKRNWRVSELFEEAMSGEIGVRTKKLGEEVFNIMIAGGVKEKQATTWASAIAGVFGKVKKDKPLEIEQLAHISTAEKLAVLALAELLCNEQRDPSSEELKLLKADRTSVDIALFGRMLASSPEFNVEAACQVAHSISVHKVLVEDDYFTAVDDLNDGKTDAGSAHIGEANFAAALFYSYICINKSQLVENLGGNEALADNAIKALTEAAVKVSPKGKQNSFASRAYASYVMAEVGEQQPRSLSVAYLRPVHDDDMADAAITAIEKQAANFDAVYGKCADARYTINAVKGEGTLNELLDFVAK
>NC_011138.3|WP_012519307.1|3216671_3217241_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MNKELLQRGVSTALRWWKSMYASASELKKEGIQAAPTAWKAELKRAESIDAVLLSQGFRALWLSLSSDITEGSDKQVSENMLCWAAVAGALVSVSDNHTESFAKLAGRKGDGDKPVVSELRFAQLQQAQAPEEFLRRIRRILKQLKGKASVTQLAKDTCCWYQELTSNYPREADKRIAVRWAMDYYQAN
>NC_011138.3|WP_012519308.1|3217240_3218848_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLLKEPWLLFNVQQPDGSIAEKTLPITAIAKPEVIDFALPRADFQGAAYQFAIGLLQTCFAPDDEFEWKDNYLEPPTEDALRPAFSKAEHAFNATGDGPLFMQDFDSLDEAKPTSVSGLLIEAPGGNGLKLNTDHFVKRGIGEVMSLPMAVLALFTLQINAPAGGQGHRTGLRGGGPLTTLVMPQNENSPLWQKLWLNVAPNDERYSAPDLHSDTVFPWLGKTRVSAKKGSETYQKDVHPLHMFWSMPRRIRLIVEDVAGECSLTGKSCSQLVKLYKTQNYGANYAGSWSHPLTPYKRDLKKPDQEDLSIKGQPGGITYKIWDVLTLTGSPDGGKTQQMCASVVRSFNHLVNDDILEDVTAQARLWVFGYDMDNMKARGWYSETMPLFQVPSAKQQHILDYIKQLQTIANDALWHCRSQIKSAWFDKPGDAKGDFSFIETAFWQQTQSAFFAAVQQLMSSDSLYLTSMEAKQWLSTLRNVALSLFDEYALSELGSERTMEKRIGARKNLLKGLYSKSFKKFETEHQIEPNKEAN
>NC_011138.3|WP_012519309.1|3218844_3221592_-|CRISPR-associated-helicase/endonuclease-Cas3
MDKELPPYFRYWGKAKKDSEQSGADYHLLPYHCLDVAAVCYEWLDTDTKLAGELSDYLAIPRDQFKSLMSFFMAMHDLGKFASAFQALYSSDSTKLILTNSRKSYDGSHYRHDRLGTWFWRKLRQQICERCTEGHGLNRRQLKYLTKPLNIIMDCMLGHHGVPVELDEPGIEGFTESQNLSASEAFTLDLITLFQPEFTEVMIQNDSDWLVKLKQVSWHIAGIAVLCDWIGSDQADFPYVSDEMPLDIYWQTAKKQAKRALESKQLIRSFNVAPFLSVENSFGFSPTPLQSWAEKVEITDTPQLFILEDVTGAGKTEAALTLAHRLMEKGVASGFYFGLPTMATSNAMYKRVTEHYLSMYESVAKKPSIVLAHGAREMNPLFQQTVITSGKDNSDYNAEDKTALAECHRWLADSRKKALLAPVGVGTIDQALLAVLPKRHQSLRLLGLHNKVLVFDEVHAADEYMFELLEGLLKLHLHQGGSVILLTATLPLKQRKKLVEIWQVATGSEVILPKKTSFSDFPLATHVAPGTKNPVQEHTMPSREAVSRAVTVTFLHDEASCIERIINTIESGVCVVWVRNSVDDALAAYSTLSTQMSNPDDCILFHSRFTLNDRNLIEAKVLNVFGKHADAGSRAGKVLIATQVFQESLDADCDLMISDICPIDDLIQRAGRLHRHSRDKQGKFTPGKPDQRGQPELIVHAPHWSDKPGEDWVRQDFRNTSYVYPSAGRLWLGMRELLKLGTMRMPENARQLIEAVYSDEGREQIPASLIAQEQRVMGDERARENQAFARKLNWETGYQITNRGRWEEDEVEINTRLSEREEVQIVLLKVDAQERLTFWCEHKQHAIQLSTLKLAKNKYADNLSPVPEKYQEQLDKLIAKYPVLKFKQCWIPEQDERFGYSPVSGFYQKIIKEEL
>NC_011138.3|WP_012519310.1|3221710_3222547_-|WYL-domain-containing-protein
MEDKAESKYFWLIELLAYWQGKVNSKDLIDAFFISATQAKKYLSAYNSLYPSQLIYNRSVKAHQTQTEFNAQFISTDVAEYLDWLNGYRAKTSSSNQSSISTELKIPSRRVSPQVMRGLIGAIKQRRRVDVEYLSLNTSSFEDRVIQPHSLVKTGLRWHLRGYCEYRSEFRDFVLSRFRGTPLLMDQATFFEKDDPGWNTEIFLRIQPDPRFSKAQSAVIEQDYQMKNGELLIKIKPALAQYLIQEMRVRTEFLAKTPQQQQLVLVNESDVKEWLFGN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_011138_2	2.31\|3210505\|32\|NC_011138\|CRISPRCasFinder,CRT	3210505-3210536	32	MN693102	Marine virus AFVG_25M202, complete genome	28305-28336	5	0.844
NC_011138_2	2.86\|3210506\|32\|NC_011138\|PILER-CR	3210506-3210537	32	MN693102	Marine virus AFVG_25M202, complete genome	28305-28336	5	0.844
NC_011138_2	2.22\|3209956\|32\|NC_011138\|CRISPRCasFinder,CRT	3209956-3209987	32	MT773557	Myoviridae sp. isolate BML_S_1 genomic sequence	10224-10255	6	0.812
NC_011138_2	2.24\|3210078\|32\|NC_011138\|CRISPRCasFinder,CRT	3210078-3210109	32	NZ_CP019707	Pantoea alhagi strain LTYR-11Z plasmid pPALTYR11Z, complete sequence	44925-44956	6	0.812
NC_011138_2	2.77\|3209957\|32\|NC_011138\|PILER-CR	3209957-3209988	32	MT773557	Myoviridae sp. isolate BML_S_1 genomic sequence	10224-10255	6	0.812
NC_011138_2	2.79\|3210079\|32\|NC_011138\|PILER-CR	3210079-3210110	32	NZ_CP019707	Pantoea alhagi strain LTYR-11Z plasmid pPALTYR11Z, complete sequence	44925-44956	6	0.812
NC_011138_2	2.1\|3208674\|32\|NC_011138\|CRISPRCasFinder,CRT	3208674-3208705	32	HQ634175	Cyanophage P-RSM1 genomic sequence	13272-13303	7	0.781
NC_011138_2	2.19\|3209773\|32\|NC_011138\|CRISPRCasFinder,CRT	3209773-3209804	32	NC_042010	Streptomyces phage Paradiddles, complete genome	32867-32898	7	0.781
NC_011138_2	2.24\|3210078\|32\|NC_011138\|CRISPRCasFinder,CRT	3210078-3210109	32	MK291442	Paracoccus phage vB_PkoS_Pkon1, complete genome	5238-5269	7	0.781
NC_011138_2	2.56\|3208675\|32\|NC_011138\|PILER-CR	3208675-3208706	32	HQ634175	Cyanophage P-RSM1 genomic sequence	13272-13303	7	0.781
NC_011138_2	2.74\|3209774\|32\|NC_011138\|PILER-CR	3209774-3209805	32	NC_042010	Streptomyces phage Paradiddles, complete genome	32867-32898	7	0.781
NC_011138_2	2.79\|3210079\|32\|NC_011138\|PILER-CR	3210079-3210110	32	MK291442	Paracoccus phage vB_PkoS_Pkon1, complete genome	5238-5269	7	0.781
NC_011138_2	2.2\|3208735\|32\|NC_011138\|CRISPRCasFinder,CRT	3208735-3208766	32	NC_008739	Marinobacter hydrocarbonoclasticus VT8 plasmid pMAQU02, complete sequence	133649-133680	8	0.75
NC_011138_2	2.2\|3208735\|32\|NC_011138\|CRISPRCasFinder,CRT	3208735-3208766	32	NZ_CP039433	Rhodococcus sp. SGAir0479 plasmid unnamed	76382-76413	8	0.75
NC_011138_2	2.6\|3208980\|32\|NC_011138\|CRISPRCasFinder,CRT	3208980-3209011	32	NC_017536	Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence	2457-2488	8	0.75
NC_011138_2	2.22\|3209956\|32\|NC_011138\|CRISPRCasFinder,CRT	3209956-3209987	32	AP011616	Thermus phage phiYS40 DNA, complete genome	38565-38596	8	0.75
NC_011138_2	2.22\|3209956\|32\|NC_011138\|CRISPRCasFinder,CRT	3209956-3209987	32	KJ081346	Bacillus phage BCP8-2, complete genome	51982-52013	8	0.75
NC_011138_2	2.22\|3209956\|32\|NC_011138\|CRISPRCasFinder,CRT	3209956-3209987	32	DQ997624	Thermus thermophilus phage YS40, complete genome	38565-38596	8	0.75
NC_011138_2	2.22\|3209956\|32\|NC_011138\|CRISPRCasFinder,CRT	3209956-3209987	32	NC_027352	Bacillus phage JBP901, complete genome	14489-14520	8	0.75
NC_011138_2	2.22\|3209956\|32\|NC_011138\|CRISPRCasFinder,CRT	3209956-3209987	32	NC_015937	Thermus phage TMA, complete genome	38295-38326	8	0.75
NC_011138_2	2.22\|3209956\|32\|NC_011138\|CRISPRCasFinder,CRT	3209956-3209987	32	NC_008584	Thermus phage phiYS40, complete genome	38565-38596	8	0.75
NC_011138_2	2.22\|3209956\|32\|NC_011138\|CRISPRCasFinder,CRT	3209956-3209987	32	AP011617	Thermus phage TMA DNA, complete genome	38295-38326	8	0.75
NC_011138_2	2.27\|3210261\|32\|NC_011138\|CRISPRCasFinder,CRT	3210261-3210292	32	MH248138	Erwinia phage vB_EamM_Alexandra, complete genome	46004-46035	8	0.75
NC_011138_2	2.36\|3210810\|32\|NC_011138\|CRISPRCasFinder,CRT	3210810-3210841	32	HM144387	Bacillus phage W.Ph., complete genome	156648-156679	8	0.75
NC_011138_2	2.36\|3210810\|32\|NC_011138\|CRISPRCasFinder,CRT	3210810-3210841	32	KU847400	UNVERIFIED: Bacillus phage Crookii, complete genome	801-832	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	NC_014635	Aeromonas phage phiAS4, complete genome	142118-142149	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MF479730	Aeromonas phage AS-gz, complete genome	108688-108719	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	18248-18279	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	AY121862	Enterobacteria phage P22 section D, partial genomic sequence	39-70	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	18248-18279	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK972693	Salmonella phage SI23, complete genome	26847-26878	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK250021	Prevotella phage Lak-B2, complete genome	332974-333005	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK770415	Salmonella phage SF11, complete genome	36767-36798	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	KR296686	Salmonella phage 22, complete genome	29388-29419	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK972694	Salmonella phage SE22, complete genome	5919-5950	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK770414	Salmonella phage SE16, complete genome	40663-40694	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	NC_002371	Enterobacteria phage P22 virus, complete genome	18248-18279	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	KU927495	Salmonella phage 103203_sal4, complete genome	246-277	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	KU927495	Salmonella phage 103203_sal4, complete genome	42373-42404	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	KR296688	Salmonella phage 34, complete genome	39579-39610	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	KU927498	Salmonella phage 64795_sal4, complete genome	19269-19300	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	KU927492	Salmonella phage 146851_sal4, complete genome	19280-19311	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK250024	Prevotella phage Lak-B5, complete genome	326923-326954	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	NC_030919	Salmonella phage 118970_sal4, complete genome	272-303	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK250028	Prevotella phage Lak-B9, complete genome	331813-331844	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	J02473	bacteriophage p22 tail protein (gene 9)	2405-2436	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK972686	Salmonella phage SF3, complete genome	18101-18132	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK972685	Salmonella phage SE10, complete genome	19335-19366	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	KR296687	Salmonella phage 25, complete genome	39589-39620	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK250025	Prevotella phage Lak-B6, complete genome	330115-330146	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK972687	Salmonella phage SE1 (in:P22virus), complete genome	9609-9640	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK250022	Prevotella phage Lak-B3, complete genome	330206-330237	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK250027	Prevotella phage Lak-B8, complete genome	333300-333331	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	GQ422450	Enterobacteria phage UAB_Phi20, complete genome	27608-27639	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	AF527608	Bacteriophage P22-pbi, complete sequence	18248-18279	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	NC_031946	Salmonella Phage 103203_sal5, complete genome	19392-19423	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK972692	Salmonella phage SE21, complete genome	5055-5086	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	NC_047875	Salmonella phage UPF_BP1, complete genome	32123-32154	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MT932212	Salmonella phage VSe13, complete genome	17054-17085	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK250026	Prevotella phage Lak-B7, complete genome	332347-332378	8	0.75
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MK250020	Prevotella phage Lak-B1, complete genome	331796-331827	8	0.75
NC_011138_2	2.43\|3211237\|32\|NC_011138\|CRISPRCasFinder,CRT	3211237-3211268	32	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	3770-3801	8	0.75
NC_011138_2	2.47\|3211481\|32\|NC_011138\|CRISPRCasFinder,CRT	3211481-3211512	32	NC_022071	Mycobacterium phage Crossroads, complete genome	64518-64549	8	0.75
NC_011138_2	2.47\|3211481\|32\|NC_011138\|CRISPRCasFinder,CRT	3211481-3211512	32	KU234099	Mycobacterium phage MkaliMitinis3, complete genome	64498-64529	8	0.75
NC_011138_2	2.57\|3208736\|32\|NC_011138\|PILER-CR	3208736-3208767	32	NC_008739	Marinobacter hydrocarbonoclasticus VT8 plasmid pMAQU02, complete sequence	133649-133680	8	0.75
NC_011138_2	2.57\|3208736\|32\|NC_011138\|PILER-CR	3208736-3208767	32	NZ_CP039433	Rhodococcus sp. SGAir0479 plasmid unnamed	76382-76413	8	0.75
NC_011138_2	2.61\|3208981\|32\|NC_011138\|PILER-CR	3208981-3209012	32	NC_017536	Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence	2457-2488	8	0.75
NC_011138_2	2.77\|3209957\|32\|NC_011138\|PILER-CR	3209957-3209988	32	AP011616	Thermus phage phiYS40 DNA, complete genome	38565-38596	8	0.75
NC_011138_2	2.77\|3209957\|32\|NC_011138\|PILER-CR	3209957-3209988	32	KJ081346	Bacillus phage BCP8-2, complete genome	51982-52013	8	0.75
NC_011138_2	2.77\|3209957\|32\|NC_011138\|PILER-CR	3209957-3209988	32	DQ997624	Thermus thermophilus phage YS40, complete genome	38565-38596	8	0.75
NC_011138_2	2.77\|3209957\|32\|NC_011138\|PILER-CR	3209957-3209988	32	NC_027352	Bacillus phage JBP901, complete genome	14489-14520	8	0.75
NC_011138_2	2.77\|3209957\|32\|NC_011138\|PILER-CR	3209957-3209988	32	NC_015937	Thermus phage TMA, complete genome	38295-38326	8	0.75
NC_011138_2	2.77\|3209957\|32\|NC_011138\|PILER-CR	3209957-3209988	32	NC_008584	Thermus phage phiYS40, complete genome	38565-38596	8	0.75
NC_011138_2	2.77\|3209957\|32\|NC_011138\|PILER-CR	3209957-3209988	32	AP011617	Thermus phage TMA DNA, complete genome	38295-38326	8	0.75
NC_011138_2	2.82\|3210262\|32\|NC_011138\|PILER-CR	3210262-3210293	32	MH248138	Erwinia phage vB_EamM_Alexandra, complete genome	46004-46035	8	0.75
NC_011138_2	2.91\|3210811\|32\|NC_011138\|PILER-CR	3210811-3210842	32	HM144387	Bacillus phage W.Ph., complete genome	156648-156679	8	0.75
NC_011138_2	2.91\|3210811\|32\|NC_011138\|PILER-CR	3210811-3210842	32	KU847400	UNVERIFIED: Bacillus phage Crookii, complete genome	801-832	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	NC_014635	Aeromonas phage phiAS4, complete genome	142118-142149	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MF479730	Aeromonas phage AS-gz, complete genome	108688-108719	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	18248-18279	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	AY121862	Enterobacteria phage P22 section D, partial genomic sequence	39-70	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	18248-18279	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK972693	Salmonella phage SI23, complete genome	26847-26878	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK250021	Prevotella phage Lak-B2, complete genome	332974-333005	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK770415	Salmonella phage SF11, complete genome	36767-36798	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	KR296686	Salmonella phage 22, complete genome	29388-29419	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK972694	Salmonella phage SE22, complete genome	5919-5950	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK770414	Salmonella phage SE16, complete genome	40663-40694	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	NC_002371	Enterobacteria phage P22 virus, complete genome	18248-18279	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	KU927495	Salmonella phage 103203_sal4, complete genome	246-277	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	KU927495	Salmonella phage 103203_sal4, complete genome	42373-42404	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	KR296688	Salmonella phage 34, complete genome	39579-39610	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	KU927498	Salmonella phage 64795_sal4, complete genome	19269-19300	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	KU927492	Salmonella phage 146851_sal4, complete genome	19280-19311	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK250024	Prevotella phage Lak-B5, complete genome	326923-326954	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	NC_030919	Salmonella phage 118970_sal4, complete genome	272-303	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK250028	Prevotella phage Lak-B9, complete genome	331813-331844	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	J02473	bacteriophage p22 tail protein (gene 9)	2405-2436	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK972686	Salmonella phage SF3, complete genome	18101-18132	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK972685	Salmonella phage SE10, complete genome	19335-19366	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	KR296687	Salmonella phage 25, complete genome	39589-39620	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK250025	Prevotella phage Lak-B6, complete genome	330115-330146	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK972687	Salmonella phage SE1 (in:P22virus), complete genome	9609-9640	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK250022	Prevotella phage Lak-B3, complete genome	330206-330237	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK250027	Prevotella phage Lak-B8, complete genome	333300-333331	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	GQ422450	Enterobacteria phage UAB_Phi20, complete genome	27608-27639	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	AF527608	Bacteriophage P22-pbi, complete sequence	18248-18279	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	NC_031946	Salmonella Phage 103203_sal5, complete genome	19392-19423	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK972692	Salmonella phage SE21, complete genome	5055-5086	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	NC_047875	Salmonella phage UPF_BP1, complete genome	32123-32154	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MT932212	Salmonella phage VSe13, complete genome	17054-17085	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK250026	Prevotella phage Lak-B7, complete genome	332347-332378	8	0.75
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MK250020	Prevotella phage Lak-B1, complete genome	331796-331827	8	0.75
NC_011138_2	2.98\|3211238\|32\|NC_011138\|PILER-CR	3211238-3211269	32	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	3770-3801	8	0.75
NC_011138_2	2.102\|3211482\|32\|NC_011138\|PILER-CR	3211482-3211513	32	NC_022071	Mycobacterium phage Crossroads, complete genome	64518-64549	8	0.75
NC_011138_2	2.102\|3211482\|32\|NC_011138\|PILER-CR	3211482-3211513	32	KU234099	Mycobacterium phage MkaliMitinis3, complete genome	64498-64529	8	0.75
NC_011138_2	2.1\|3208674\|32\|NC_011138\|CRISPRCasFinder,CRT	3208674-3208705	32	NZ_KX149096	Staphylococcus aureus strain WG260 plasmid pWBG4, complete sequence	15060-15091	9	0.719
NC_011138_2	2.1\|3208674\|32\|NC_011138\|CRISPRCasFinder,CRT	3208674-3208705	32	NZ_AP019752	Staphylococcus aureus strain JRA307 plasmid pJRA307-1, complete sequence	7639-7670	9	0.719
NC_011138_2	2.1\|3208674\|32\|NC_011138\|CRISPRCasFinder,CRT	3208674-3208705	32	HQ634148	Synechococcus phage S-CBS4, * SEQUENCING IN PROGRESS *, 2 unordered pieces	88506-88537	9	0.719
NC_011138_2	2.1\|3208674\|32\|NC_011138\|CRISPRCasFinder,CRT	3208674-3208705	32	HQ698895	Synechococcus phage S-CBS4, complete genome	17044-17075	9	0.719
NC_011138_2	2.5\|3208919\|32\|NC_011138\|CRISPRCasFinder,CRT	3208919-3208950	32	NC_003276	Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120alpha, complete sequence	12503-12534	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019095	Synechococcus phage ACG-2014f isolate Syn7803US34, complete genome	203063-203094	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019086	Synechococcus phage ACG-2014f isolate Syn7803US17, complete genome	200338-200369	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019106	Synechococcus phage ACG-2014f isolate Syn7803US50, complete genome	197005-197036	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019107	Synechococcus phage ACG-2014f isolate Syn7803US52, complete genome	194844-194875	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019143	Synechococcus phage ACG-2014f isolate Syn7803C12, complete genome	197510-197541	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019103	Synechococcus phage ACG-2014f isolate Syn7803US44, complete genome	199383-199414	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019102	Synechococcus phage ACG-2014f isolate Syn7803US43, complete genome	198958-198989	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019066	Synechococcus phage ACG-2014f isolate Syn7803C9, complete genome	200195-200226	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019142	Synechococcus phage ACG-2014f isolate Syn7803C11, complete genome	196805-196836	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019149	Synechococcus phage ACG-2014f isolate Syn7803C21, complete genome	196507-196538	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019105	Synechococcus phage ACG-2014f isolate Syn7803US4, complete genome	196290-196321	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019098	Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome	200798-200829	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019159	Synechococcus phage ACG-2014f isolate Syn7803C34, complete genome	199129-199160	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019123	Synechococcus phage ACG-2014f isolate Syn7803US7, complete genome	194100-194131	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019111	Synechococcus phage ACG-2014f isolate Syn7803US57, complete genome	196108-196139	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019148	Synechococcus phage ACG-2014f isolate Syn7803C19, complete genome	194017-194048	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	NC_047712	Synechococcus phage ACG-2014f isolate Syn7803C7, complete genome	196970-197001	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019090	Synechococcus phage ACG-2014f isolate Syn7803US24, complete genome	199118-199149	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019146	Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome	199592-199623	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019152	Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome	200107-200138	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019093	Synechococcus phage ACG-2014f isolate Syn7803US30, complete genome	195693-195724	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019151	Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome	198567-198598	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019150	Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome	200633-200664	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	NC_026927	Synechococcus phage ACG-2014f isolate Syn7803C90, complete genome	201870-201901	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019097	Synechococcus phage ACG-2014f isolate Syn7803US37, complete genome	202440-202471	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019045	Synechococcus phage ACG-2014f isolate Syn7803C6, complete genome	199719-199750	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019037	Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome	199245-199276	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019099	Synechococcus phage ACG-2014f isolate Syn7803US3, complete genome	199519-199550	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019155	Synechococcus phage ACG-2014f isolate Syn7803C29, complete genome	196151-196182	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019141	Synechococcus phage ACG-2014f isolate Syn7803C10, complete genome	195535-195566	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019053	Synechococcus phage ACG-2014f isolate Syn7803C80, complete genome	199571-199602	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019147	Synechococcus phage ACG-2014f isolate Syn7803C17, complete genome	195943-195974	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019100	Synechococcus phage ACG-2014f isolate Syn7803US40, complete genome	197165-197196	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019101	Synechococcus phage ACG-2014f isolate Syn7803US42, complete genome	197212-197243	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019085	Synechococcus phage ACG-2014f isolate Syn7803US13, complete genome	195911-195942	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019096	Synechococcus phage ACG-2014f isolate Syn7803US36, complete genome	199855-199886	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019091	Synechococcus phage ACG-2014f isolate Syn7803US26, complete genome	188292-188323	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019144	Synechococcus phage ACG-2014f isolate Syn7803C14, complete genome	196118-196149	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019145	Synechococcus phage ACG-2014f isolate Syn7803C15, complete genome	199249-199280	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019058	Synechococcus phage ACG-2014f isolate Syn7803C8, complete genome	196799-196830	9	0.719
NC_011138_2	2.8\|3209102\|32\|NC_011138\|CRISPRCasFinder,CRT	3209102-3209133	32	KJ019092	Synechococcus phage ACG-2014f isolate Syn7803US2, complete genome	198548-198579	9	0.719
NC_011138_2	2.15\|3209529\|32\|NC_011138\|CRISPRCasFinder,CRT	3209529-3209560	32	MG592547	Vibrio phage 1.181.O._10N.286.46.C9, partial genome	19074-19105	9	0.719
NC_011138_2	2.17\|3209651\|32\|NC_011138\|CRISPRCasFinder,CRT	3209651-3209682	32	MT446392	UNVERIFIED: Escherichia virus TH15, complete genome	34801-34832	9	0.719
NC_011138_2	2.18\|3209712\|32\|NC_011138\|CRISPRCasFinder,CRT	3209712-3209743	32	MN310371	Pseudomonas monteilii strain QJ20133 plasmid pJ20133-VIM, complete sequence	65728-65759	9	0.719
NC_011138_2	2.19\|3209773\|32\|NC_011138\|CRISPRCasFinder,CRT	3209773-3209804	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	606991-607022	9	0.719
NC_011138_2	2.20\|3209834\|32\|NC_011138\|CRISPRCasFinder,CRT	3209834-3209865	32	NZ_CP020716	Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence	44149-44180	9	0.719
NC_011138_2	2.22\|3209956\|32\|NC_011138\|CRISPRCasFinder,CRT	3209956-3209987	32	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	100894-100925	9	0.719
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	NZ_CP050185	Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence	115214-115245	9	0.719
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	AP013521	Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-U-MedDCM-OCT-S42-C60	7060-7091	9	0.719
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	140362-140393	9	0.719
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	33730-33761	9	0.719
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	DQ386162	Streptococcus phage M102AD, complete genome	7645-7676	9	0.719
NC_011138_2	2.39\|3210993\|32\|NC_011138\|CRISPRCasFinder,CRT	3210993-3211024	32	NZ_CP014311	Burkholderia sp. PAMC 26561 plasmid unnamed4, complete sequence	91374-91405	9	0.719
NC_011138_2	2.39\|3210993\|32\|NC_011138\|CRISPRCasFinder,CRT	3210993-3211024	32	KU836751	Bacillus phage Leo2, complete genome	13378-13409	9	0.719
NC_011138_2	2.42\|3211176\|32\|NC_011138\|CRISPRCasFinder,CRT	3211176-3211207	32	MT711978	Streptomyces phage Endor1, complete genome	1615-1646	9	0.719
NC_011138_2	2.43\|3211237\|32\|NC_011138\|CRISPRCasFinder,CRT	3211237-3211268	32	NZ_CP020328	Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP1, complete sequence	51449-51480	9	0.719
NC_011138_2	2.43\|3211237\|32\|NC_011138\|CRISPRCasFinder,CRT	3211237-3211268	32	NZ_CP019795	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP1, complete sequence	32512-32543	9	0.719
NC_011138_2	2.43\|3211237\|32\|NC_011138\|CRISPRCasFinder,CRT	3211237-3211268	32	NZ_CP019660	Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed1, complete sequence	57432-57463	9	0.719
NC_011138_2	2.43\|3211237\|32\|NC_011138\|CRISPRCasFinder,CRT	3211237-3211268	32	NZ_CP019657	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed2, complete sequence	57435-57466	9	0.719
NC_011138_2	2.44\|3211298\|32\|NC_011138\|CRISPRCasFinder,CRT	3211298-3211329	32	NC_019893	Singulisphaera acidiphila DSM 18658 plasmid pSINAC01, complete sequence	39404-39435	9	0.719
NC_011138_2	2.56\|3208675\|32\|NC_011138\|PILER-CR	3208675-3208706	32	NZ_KX149096	Staphylococcus aureus strain WG260 plasmid pWBG4, complete sequence	15060-15091	9	0.719
NC_011138_2	2.56\|3208675\|32\|NC_011138\|PILER-CR	3208675-3208706	32	NZ_AP019752	Staphylococcus aureus strain JRA307 plasmid pJRA307-1, complete sequence	7639-7670	9	0.719
NC_011138_2	2.56\|3208675\|32\|NC_011138\|PILER-CR	3208675-3208706	32	HQ634148	Synechococcus phage S-CBS4, * SEQUENCING IN PROGRESS *, 2 unordered pieces	88506-88537	9	0.719
NC_011138_2	2.56\|3208675\|32\|NC_011138\|PILER-CR	3208675-3208706	32	HQ698895	Synechococcus phage S-CBS4, complete genome	17044-17075	9	0.719
NC_011138_2	2.60\|3208920\|32\|NC_011138\|PILER-CR	3208920-3208951	32	NC_003276	Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120alpha, complete sequence	12503-12534	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019095	Synechococcus phage ACG-2014f isolate Syn7803US34, complete genome	203063-203094	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019086	Synechococcus phage ACG-2014f isolate Syn7803US17, complete genome	200338-200369	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019106	Synechococcus phage ACG-2014f isolate Syn7803US50, complete genome	197005-197036	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019107	Synechococcus phage ACG-2014f isolate Syn7803US52, complete genome	194844-194875	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019143	Synechococcus phage ACG-2014f isolate Syn7803C12, complete genome	197510-197541	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019103	Synechococcus phage ACG-2014f isolate Syn7803US44, complete genome	199383-199414	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019102	Synechococcus phage ACG-2014f isolate Syn7803US43, complete genome	198958-198989	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019066	Synechococcus phage ACG-2014f isolate Syn7803C9, complete genome	200195-200226	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019142	Synechococcus phage ACG-2014f isolate Syn7803C11, complete genome	196805-196836	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019149	Synechococcus phage ACG-2014f isolate Syn7803C21, complete genome	196507-196538	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019105	Synechococcus phage ACG-2014f isolate Syn7803US4, complete genome	196290-196321	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019098	Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome	200798-200829	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019159	Synechococcus phage ACG-2014f isolate Syn7803C34, complete genome	199129-199160	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019123	Synechococcus phage ACG-2014f isolate Syn7803US7, complete genome	194100-194131	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019111	Synechococcus phage ACG-2014f isolate Syn7803US57, complete genome	196108-196139	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019148	Synechococcus phage ACG-2014f isolate Syn7803C19, complete genome	194017-194048	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	NC_047712	Synechococcus phage ACG-2014f isolate Syn7803C7, complete genome	196970-197001	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019090	Synechococcus phage ACG-2014f isolate Syn7803US24, complete genome	199118-199149	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019146	Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome	199592-199623	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019152	Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome	200107-200138	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019093	Synechococcus phage ACG-2014f isolate Syn7803US30, complete genome	195693-195724	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019151	Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome	198567-198598	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019150	Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome	200633-200664	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	NC_026927	Synechococcus phage ACG-2014f isolate Syn7803C90, complete genome	201870-201901	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019097	Synechococcus phage ACG-2014f isolate Syn7803US37, complete genome	202440-202471	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019045	Synechococcus phage ACG-2014f isolate Syn7803C6, complete genome	199719-199750	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019037	Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome	199245-199276	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019099	Synechococcus phage ACG-2014f isolate Syn7803US3, complete genome	199519-199550	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019155	Synechococcus phage ACG-2014f isolate Syn7803C29, complete genome	196151-196182	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019141	Synechococcus phage ACG-2014f isolate Syn7803C10, complete genome	195535-195566	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019053	Synechococcus phage ACG-2014f isolate Syn7803C80, complete genome	199571-199602	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019147	Synechococcus phage ACG-2014f isolate Syn7803C17, complete genome	195943-195974	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019100	Synechococcus phage ACG-2014f isolate Syn7803US40, complete genome	197165-197196	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019101	Synechococcus phage ACG-2014f isolate Syn7803US42, complete genome	197212-197243	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019085	Synechococcus phage ACG-2014f isolate Syn7803US13, complete genome	195911-195942	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019096	Synechococcus phage ACG-2014f isolate Syn7803US36, complete genome	199855-199886	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019091	Synechococcus phage ACG-2014f isolate Syn7803US26, complete genome	188292-188323	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019144	Synechococcus phage ACG-2014f isolate Syn7803C14, complete genome	196118-196149	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019145	Synechococcus phage ACG-2014f isolate Syn7803C15, complete genome	199249-199280	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019058	Synechococcus phage ACG-2014f isolate Syn7803C8, complete genome	196799-196830	9	0.719
NC_011138_2	2.63\|3209103\|32\|NC_011138\|PILER-CR	3209103-3209134	32	KJ019092	Synechococcus phage ACG-2014f isolate Syn7803US2, complete genome	198548-198579	9	0.719
NC_011138_2	2.70\|3209530\|32\|NC_011138\|PILER-CR	3209530-3209561	32	MG592547	Vibrio phage 1.181.O._10N.286.46.C9, partial genome	19074-19105	9	0.719
NC_011138_2	2.72\|3209652\|32\|NC_011138\|PILER-CR	3209652-3209683	32	MT446392	UNVERIFIED: Escherichia virus TH15, complete genome	34801-34832	9	0.719
NC_011138_2	2.73\|3209713\|32\|NC_011138\|PILER-CR	3209713-3209744	32	MN310371	Pseudomonas monteilii strain QJ20133 plasmid pJ20133-VIM, complete sequence	65728-65759	9	0.719
NC_011138_2	2.74\|3209774\|32\|NC_011138\|PILER-CR	3209774-3209805	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	606991-607022	9	0.719
NC_011138_2	2.75\|3209835\|32\|NC_011138\|PILER-CR	3209835-3209866	32	NZ_CP020716	Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence	44149-44180	9	0.719
NC_011138_2	2.77\|3209957\|32\|NC_011138\|PILER-CR	3209957-3209988	32	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	100894-100925	9	0.719
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	NZ_CP050185	Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence	115214-115245	9	0.719
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	AP013521	Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-U-MedDCM-OCT-S42-C60	7060-7091	9	0.719
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	140362-140393	9	0.719
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	33730-33761	9	0.719
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	DQ386162	Streptococcus phage M102AD, complete genome	7645-7676	9	0.719
NC_011138_2	2.94\|3210994\|32\|NC_011138\|PILER-CR	3210994-3211025	32	NZ_CP014311	Burkholderia sp. PAMC 26561 plasmid unnamed4, complete sequence	91374-91405	9	0.719
NC_011138_2	2.94\|3210994\|32\|NC_011138\|PILER-CR	3210994-3211025	32	KU836751	Bacillus phage Leo2, complete genome	13378-13409	9	0.719
NC_011138_2	2.97\|3211177\|32\|NC_011138\|PILER-CR	3211177-3211208	32	MT711978	Streptomyces phage Endor1, complete genome	1615-1646	9	0.719
NC_011138_2	2.98\|3211238\|32\|NC_011138\|PILER-CR	3211238-3211269	32	NZ_CP020328	Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP1, complete sequence	51449-51480	9	0.719
NC_011138_2	2.98\|3211238\|32\|NC_011138\|PILER-CR	3211238-3211269	32	NZ_CP019795	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP1, complete sequence	32512-32543	9	0.719
NC_011138_2	2.98\|3211238\|32\|NC_011138\|PILER-CR	3211238-3211269	32	NZ_CP019660	Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed1, complete sequence	57432-57463	9	0.719
NC_011138_2	2.98\|3211238\|32\|NC_011138\|PILER-CR	3211238-3211269	32	NZ_CP019657	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed2, complete sequence	57435-57466	9	0.719
NC_011138_2	2.99\|3211299\|32\|NC_011138\|PILER-CR	3211299-3211330	32	NC_019893	Singulisphaera acidiphila DSM 18658 plasmid pSINAC01, complete sequence	39404-39435	9	0.719
NC_011138_2	2.2\|3208735\|32\|NC_011138\|CRISPRCasFinder,CRT	3208735-3208766	32	NZ_CP013298	Arthrobacter sp. YC-RL1 plasmid unnamed 1, complete sequence	37894-37925	10	0.688
NC_011138_2	2.2\|3208735\|32\|NC_011138\|CRISPRCasFinder,CRT	3208735-3208766	32	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	382302-382333	10	0.688
NC_011138_2	2.16\|3209590\|32\|NC_011138\|CRISPRCasFinder,CRT	3209590-3209621	32	MN692989	Marine virus AFVG_117M66, complete genome	24724-24755	10	0.688
NC_011138_2	2.18\|3209712\|32\|NC_011138\|CRISPRCasFinder,CRT	3209712-3209743	32	NZ_AP015030	Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence	292340-292371	10	0.688
NC_011138_2	2.18\|3209712\|32\|NC_011138\|CRISPRCasFinder,CRT	3209712-3209743	32	NZ_AP015030	Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence	302080-302111	10	0.688
NC_011138_2	2.36\|3210810\|32\|NC_011138\|CRISPRCasFinder,CRT	3210810-3210841	32	AP014210	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C81-MedDCM-OCT-S26-C128, * SEQUENCING IN PROGRESS *	11379-11410	10	0.688
NC_011138_2	2.36\|3210810\|32\|NC_011138\|CRISPRCasFinder,CRT	3210810-3210841	32	AP014211	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C81-MedDCM-OCT-S44-C144, * SEQUENCING IN PROGRESS *	11907-11938	10	0.688
NC_011138_2	2.39\|3210993\|32\|NC_011138\|CRISPRCasFinder,CRT	3210993-3211024	32	LR606148	Rhizobium sp. Q54 genome assembly, plasmid: 5	112504-112535	10	0.688
NC_011138_2	2.42\|3211176\|32\|NC_011138\|CRISPRCasFinder,CRT	3211176-3211207	32	MT711979	Streptomyces phage Endor2, complete genome	1448-1479	10	0.688
NC_011138_2	2.42\|3211176\|32\|NC_011138\|CRISPRCasFinder,CRT	3211176-3211207	32	NC_041856	Streptomyces phage phiCAM, complete genome	1641-1672	10	0.688
NC_011138_2	2.48\|3211542\|32\|NC_011138\|CRISPRCasFinder,CRT	3211542-3211573	32	NC_014838	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	566119-566150	10	0.688
NC_011138_2	2.57\|3208736\|32\|NC_011138\|PILER-CR	3208736-3208767	32	NZ_CP013298	Arthrobacter sp. YC-RL1 plasmid unnamed 1, complete sequence	37894-37925	10	0.688
NC_011138_2	2.57\|3208736\|32\|NC_011138\|PILER-CR	3208736-3208767	32	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	382302-382333	10	0.688
NC_011138_2	2.71\|3209591\|32\|NC_011138\|PILER-CR	3209591-3209622	32	MN692989	Marine virus AFVG_117M66, complete genome	24724-24755	10	0.688
NC_011138_2	2.73\|3209713\|32\|NC_011138\|PILER-CR	3209713-3209744	32	NZ_AP015030	Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence	292340-292371	10	0.688
NC_011138_2	2.73\|3209713\|32\|NC_011138\|PILER-CR	3209713-3209744	32	NZ_AP015030	Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence	302080-302111	10	0.688
NC_011138_2	2.91\|3210811\|32\|NC_011138\|PILER-CR	3210811-3210842	32	AP014210	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C81-MedDCM-OCT-S26-C128, * SEQUENCING IN PROGRESS *	11379-11410	10	0.688
NC_011138_2	2.91\|3210811\|32\|NC_011138\|PILER-CR	3210811-3210842	32	AP014211	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C81-MedDCM-OCT-S44-C144, * SEQUENCING IN PROGRESS *	11907-11938	10	0.688
NC_011138_2	2.94\|3210994\|32\|NC_011138\|PILER-CR	3210994-3211025	32	LR606148	Rhizobium sp. Q54 genome assembly, plasmid: 5	112504-112535	10	0.688
NC_011138_2	2.97\|3211177\|32\|NC_011138\|PILER-CR	3211177-3211208	32	MT711979	Streptomyces phage Endor2, complete genome	1448-1479	10	0.688
NC_011138_2	2.97\|3211177\|32\|NC_011138\|PILER-CR	3211177-3211208	32	NC_041856	Streptomyces phage phiCAM, complete genome	1641-1672	10	0.688
NC_011138_2	2.103\|3211543\|32\|NC_011138\|PILER-CR	3211543-3211574	32	NC_014838	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	566119-566150	10	0.688
NC_011138_2	2.22\|3209956\|32\|NC_011138\|CRISPRCasFinder,CRT	3209956-3209987	32	NZ_CP008919	Providencia stuartii strain ATCC 33672 plasmid unnamed, complete sequence	27196-27227	11	0.656
NC_011138_2	2.38\|3210932\|32\|NC_011138\|CRISPRCasFinder,CRT	3210932-3210963	32	MN693823	Marine virus AFVG_250M431, complete genome	49751-49782	11	0.656
NC_011138_2	2.77\|3209957\|32\|NC_011138\|PILER-CR	3209957-3209988	32	NZ_CP008919	Providencia stuartii strain ATCC 33672 plasmid unnamed, complete sequence	27196-27227	11	0.656
NC_011138_2	2.93\|3210933\|32\|NC_011138\|PILER-CR	3210933-3210964	32	MN693823	Marine virus AFVG_250M431, complete genome	49751-49782	11	0.656

1. spacer 2.31|3210505|32|NC_011138|CRISPRCasFinder,CRT matches to MN693102 (Marine virus AFVG_25M202, complete genome) position: , mismatch: 5, identity: 0.844

taagtgatttaaggataaggcgtgacggaacg	CRISPR spacer
ctaatgatttaaggattaggcatgacggaacg	Protospacer
. *.************ ****.**********

2. spacer 2.86|3210506|32|NC_011138|PILER-CR matches to MN693102 (Marine virus AFVG_25M202, complete genome) position: , mismatch: 5, identity: 0.844

taagtgatttaaggataaggcgtgacggaacg	CRISPR spacer
ctaatgatttaaggattaggcatgacggaacg	Protospacer
. *.************ ****.**********

3. spacer 2.22|3209956|32|NC_011138|CRISPRCasFinder,CRT matches to MT773557 (Myoviridae sp. isolate BML_S_1 genomic sequence) position: , mismatch: 6, identity: 0.812

gcttgaaaaatatgattcaagtgg--ttcattat	CRISPR spacer
tcttgaaagatatgatgcaagtggaattcgtt--	Protospacer
 *******.******* *******  ***.**

4. spacer 2.24|3210078|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP019707 (Pantoea alhagi strain LTYR-11Z plasmid pPALTYR11Z, complete sequence) position: , mismatch: 6, identity: 0.812

ctggtcctgccatttacgtgtctggagttttc	CRISPR spacer
ctggtcctgccatttccgtgtctgcagcgcgc	Protospacer
*************** ******** **. . *

5. spacer 2.77|3209957|32|NC_011138|PILER-CR matches to MT773557 (Myoviridae sp. isolate BML_S_1 genomic sequence) position: , mismatch: 6, identity: 0.812

gcttgaaaaatatgattcaagtgg--ttcattat	CRISPR spacer
tcttgaaagatatgatgcaagtggaattcgtt--	Protospacer
 *******.******* *******  ***.**

6. spacer 2.79|3210079|32|NC_011138|PILER-CR matches to NZ_CP019707 (Pantoea alhagi strain LTYR-11Z plasmid pPALTYR11Z, complete sequence) position: , mismatch: 6, identity: 0.812

ctggtcctgccatttacgtgtctggagttttc	CRISPR spacer
ctggtcctgccatttccgtgtctgcagcgcgc	Protospacer
*************** ******** **. . *

7. spacer 2.1|3208674|32|NC_011138|CRISPRCasFinder,CRT matches to HQ634175 (Cyanophage P-RSM1 genomic sequence) position: , mismatch: 7, identity: 0.781

tctcaatcaggaaatctttgatgaactctaaa	CRISPR spacer
cctttatcaggaaatccttgatgatctctcag	Protospacer
.**. ***********.******* **** *.

8. spacer 2.19|3209773|32|NC_011138|CRISPRCasFinder,CRT matches to NC_042010 (Streptomyces phage Paradiddles, complete genome) position: , mismatch: 7, identity: 0.781

taactatta--cgaagcgctggagtttgctaaaa	CRISPR spacer
--cgtatcagccgaagagctggagtttgctgaaa	Protospacer
    ***.*  ***** *************.***

9. spacer 2.24|3210078|32|NC_011138|CRISPRCasFinder,CRT matches to MK291442 (Paracoccus phage vB_PkoS_Pkon1, complete genome) position: , mismatch: 7, identity: 0.781

ctggtcctgccatttacgtgtctggagttttc	CRISPR spacer
ctggtcctgccatttgcgggtctcaagctggc	Protospacer
***************.** **** .**.*  *

10. spacer 2.56|3208675|32|NC_011138|PILER-CR matches to HQ634175 (Cyanophage P-RSM1 genomic sequence) position: , mismatch: 7, identity: 0.781

tctcaatcaggaaatctttgatgaactctaaa	CRISPR spacer
cctttatcaggaaatccttgatgatctctcag	Protospacer
.**. ***********.******* **** *.

11. spacer 2.74|3209774|32|NC_011138|PILER-CR matches to NC_042010 (Streptomyces phage Paradiddles, complete genome) position: , mismatch: 7, identity: 0.781

taactatta--cgaagcgctggagtttgctaaaa	CRISPR spacer
--cgtatcagccgaagagctggagtttgctgaaa	Protospacer
    ***.*  ***** *************.***

12. spacer 2.79|3210079|32|NC_011138|PILER-CR matches to MK291442 (Paracoccus phage vB_PkoS_Pkon1, complete genome) position: , mismatch: 7, identity: 0.781

ctggtcctgccatttacgtgtctggagttttc	CRISPR spacer
ctggtcctgccatttgcgggtctcaagctggc	Protospacer
***************.** **** .**.*  *

13. spacer 2.2|3208735|32|NC_011138|CRISPRCasFinder,CRT matches to NC_008739 (Marinobacter hydrocarbonoclasticus VT8 plasmid pMAQU02, complete sequence) position: , mismatch: 8, identity: 0.75

gacccgccaccaacatctacacgctggcctga	CRISPR spacer
gacgcgccaccaacatctacaagcccctggga	Protospacer
*** ***************** **.  .  **

14. spacer 2.2|3208735|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP039433 (Rhodococcus sp. SGAir0479 plasmid unnamed) position: , mismatch: 8, identity: 0.75

gacccgccaccaacatctacacgctggcctga	CRISPR spacer
gacccgcccccaccatctacacggaggataaa	Protospacer
******** *** **********  ** . .*

15. spacer 2.6|3208980|32|NC_011138|CRISPRCasFinder,CRT matches to NC_017536 (Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence) position: , mismatch: 8, identity: 0.75

gcaaaaagaaaggcccgcaagaggaaatgcta	CRISPR spacer
gcaaaaagaaaggcccccaagcggcgaaccac	Protospacer
**************** **** ** .*  *

16. spacer 2.22|3209956|32|NC_011138|CRISPRCasFinder,CRT matches to AP011616 (Thermus phage phiYS40 DNA, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
cattataaagtatggttcaagtggttcatttg	Protospacer
  **. ***.****.***************

17. spacer 2.22|3209956|32|NC_011138|CRISPRCasFinder,CRT matches to KJ081346 (Bacillus phage BCP8-2, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
aattgaaaaatatgattgaagaggttaagaag	Protospacer
. *************** *** **** *  *

18. spacer 2.22|3209956|32|NC_011138|CRISPRCasFinder,CRT matches to DQ997624 (Thermus thermophilus phage YS40, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
cattataaagtatggttcaagtggttcatttg	Protospacer
  **. ***.****.***************

19. spacer 2.22|3209956|32|NC_011138|CRISPRCasFinder,CRT matches to NC_027352 (Bacillus phage JBP901, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
aattgaaaaatatgattgaagaggttaagaag	Protospacer
. *************** *** **** *  *

20. spacer 2.22|3209956|32|NC_011138|CRISPRCasFinder,CRT matches to NC_015937 (Thermus phage TMA, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
cattataaagtatggttcaagtggttcatttg	Protospacer
  **. ***.****.***************

21. spacer 2.22|3209956|32|NC_011138|CRISPRCasFinder,CRT matches to NC_008584 (Thermus phage phiYS40, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
cattataaagtatggttcaagtggttcatttg	Protospacer
  **. ***.****.***************

22. spacer 2.22|3209956|32|NC_011138|CRISPRCasFinder,CRT matches to AP011617 (Thermus phage TMA DNA, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
cattataaagtatggttcaagtggttcatttg	Protospacer
  **. ***.****.***************

23. spacer 2.27|3210261|32|NC_011138|CRISPRCasFinder,CRT matches to MH248138 (Erwinia phage vB_EamM_Alexandra, complete genome) position: , mismatch: 8, identity: 0.75

ccagactcacgtaggtctgagttgattggacg	CRISPR spacer
actgactcatgtagctctgagttgatgcggca	Protospacer
 * ******.**** ***********  *.*.

24. spacer 2.36|3210810|32|NC_011138|CRISPRCasFinder,CRT matches to HM144387 (Bacillus phage W.Ph., complete genome) position: , mismatch: 8, identity: 0.75

ttaaaagtacgttaaatgccatatttggtccg---	CRISPR spacer
ttaaaagtacgttacatgccttactca---cgaat	Protospacer
************** ***** **.*..   **

25. spacer 2.36|3210810|32|NC_011138|CRISPRCasFinder,CRT matches to KU847400 (UNVERIFIED: Bacillus phage Crookii, complete genome) position: , mismatch: 8, identity: 0.75

ttaaaagtacgttaaatgccatatttggtccg---	CRISPR spacer
ttaaaagtacgttacatgccttactca---cgaat	Protospacer
************** ***** **.*..   **

26. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to NC_014635 (Aeromonas phage phiAS4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag------	CRISPR spacer
ctgttgaatattctaaagcaaat------gggataact	Protospacer
******************* ***      *.*

27. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MF479730 (Aeromonas phage AS-gz, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag------	CRISPR spacer
ctgttgaatattctaaagcgaat------gggataact	Protospacer
******************* ***      *.*

28. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

29. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to AY121862 (Enterobacteria phage P22 section D, partial genomic sequence) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

30. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

31. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

32. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

33. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

34. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

35. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

36. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

37. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

38. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to KU927495 (Salmonella phage 103203_sal4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

39. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to KU927495 (Salmonella phage 103203_sal4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

40. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

41. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to KU927498 (Salmonella phage 64795_sal4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

42. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to KU927492 (Salmonella phage 146851_sal4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

43. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

44. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to NC_030919 (Salmonella phage 118970_sal4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

45. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

46. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to J02473 (bacteriophage p22 tail protein (gene 9)) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

47. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

48. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

49. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

50. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

51. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

52. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

53. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

54. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to GQ422450 (Enterobacteria phage UAB_Phi20, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

55. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

56. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to NC_031946 (Salmonella Phage 103203_sal5, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

57. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

58. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

59. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MT932212 (Salmonella phage VSe13, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

60. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

61. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

62. spacer 2.43|3211237|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcgtaaatggtaacggggccattcatccagc	CRISPR spacer
ggtggacaaggtaacggggccattcctacagc	Protospacer
  .* * * **************** * ****

63. spacer 2.47|3211481|32|NC_011138|CRISPRCasFinder,CRT matches to NC_022071 (Mycobacterium phage Crossroads, complete genome) position: , mismatch: 8, identity: 0.75

agcgtcagcggtcaatccaacctgtggcgcaa	CRISPR spacer
tgtgctagcggtcaatacaacgtgtggcgaga	Protospacer
 *.*..********** **** ******* .*

64. spacer 2.47|3211481|32|NC_011138|CRISPRCasFinder,CRT matches to KU234099 (Mycobacterium phage MkaliMitinis3, complete genome) position: , mismatch: 8, identity: 0.75

agcgtcagcggtcaatccaacctgtggcgcaa	CRISPR spacer
tgtgctagcggtcaatacaacgtgtggcgaga	Protospacer
 *.*..********** **** ******* .*

65. spacer 2.57|3208736|32|NC_011138|PILER-CR matches to NC_008739 (Marinobacter hydrocarbonoclasticus VT8 plasmid pMAQU02, complete sequence) position: , mismatch: 8, identity: 0.75

gacccgccaccaacatctacacgctggcctga	CRISPR spacer
gacgcgccaccaacatctacaagcccctggga	Protospacer
*** ***************** **.  .  **

66. spacer 2.57|3208736|32|NC_011138|PILER-CR matches to NZ_CP039433 (Rhodococcus sp. SGAir0479 plasmid unnamed) position: , mismatch: 8, identity: 0.75

gacccgccaccaacatctacacgctggcctga	CRISPR spacer
gacccgcccccaccatctacacggaggataaa	Protospacer
******** *** **********  ** . .*

67. spacer 2.61|3208981|32|NC_011138|PILER-CR matches to NC_017536 (Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence) position: , mismatch: 8, identity: 0.75

gcaaaaagaaaggcccgcaagaggaaatgcta	CRISPR spacer
gcaaaaagaaaggcccccaagcggcgaaccac	Protospacer
**************** **** ** .*  *

68. spacer 2.77|3209957|32|NC_011138|PILER-CR matches to AP011616 (Thermus phage phiYS40 DNA, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
cattataaagtatggttcaagtggttcatttg	Protospacer
  **. ***.****.***************

69. spacer 2.77|3209957|32|NC_011138|PILER-CR matches to KJ081346 (Bacillus phage BCP8-2, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
aattgaaaaatatgattgaagaggttaagaag	Protospacer
. *************** *** **** *  *

70. spacer 2.77|3209957|32|NC_011138|PILER-CR matches to DQ997624 (Thermus thermophilus phage YS40, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
cattataaagtatggttcaagtggttcatttg	Protospacer
  **. ***.****.***************

71. spacer 2.77|3209957|32|NC_011138|PILER-CR matches to NC_027352 (Bacillus phage JBP901, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
aattgaaaaatatgattgaagaggttaagaag	Protospacer
. *************** *** **** *  *

72. spacer 2.77|3209957|32|NC_011138|PILER-CR matches to NC_015937 (Thermus phage TMA, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
cattataaagtatggttcaagtggttcatttg	Protospacer
  **. ***.****.***************

73. spacer 2.77|3209957|32|NC_011138|PILER-CR matches to NC_008584 (Thermus phage phiYS40, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
cattataaagtatggttcaagtggttcatttg	Protospacer
  **. ***.****.***************

74. spacer 2.77|3209957|32|NC_011138|PILER-CR matches to AP011617 (Thermus phage TMA DNA, complete genome) position: , mismatch: 8, identity: 0.75

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
cattataaagtatggttcaagtggttcatttg	Protospacer
  **. ***.****.***************

75. spacer 2.82|3210262|32|NC_011138|PILER-CR matches to MH248138 (Erwinia phage vB_EamM_Alexandra, complete genome) position: , mismatch: 8, identity: 0.75

ccagactcacgtaggtctgagttgattggacg	CRISPR spacer
actgactcatgtagctctgagttgatgcggca	Protospacer
 * ******.**** ***********  *.*.

76. spacer 2.91|3210811|32|NC_011138|PILER-CR matches to HM144387 (Bacillus phage W.Ph., complete genome) position: , mismatch: 8, identity: 0.75

ttaaaagtacgttaaatgccatatttggtccg---	CRISPR spacer
ttaaaagtacgttacatgccttactca---cgaat	Protospacer
************** ***** **.*..   **

77. spacer 2.91|3210811|32|NC_011138|PILER-CR matches to KU847400 (UNVERIFIED: Bacillus phage Crookii, complete genome) position: , mismatch: 8, identity: 0.75

ttaaaagtacgttaaatgccatatttggtccg---	CRISPR spacer
ttaaaagtacgttacatgccttactca---cgaat	Protospacer
************** ***** **.*..   **

78. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to NC_014635 (Aeromonas phage phiAS4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag------	CRISPR spacer
ctgttgaatattctaaagcaaat------gggataact	Protospacer
******************* ***      *.*

79. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MF479730 (Aeromonas phage AS-gz, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag------	CRISPR spacer
ctgttgaatattctaaagcgaat------gggataact	Protospacer
******************* ***      *.*

80. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

81. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to AY121862 (Enterobacteria phage P22 section D, partial genomic sequence) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

82. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

83. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

84. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

85. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

86. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

87. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

88. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

89. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

90. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to KU927495 (Salmonella phage 103203_sal4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

91. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to KU927495 (Salmonella phage 103203_sal4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

92. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

93. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to KU927498 (Salmonella phage 64795_sal4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

94. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to KU927492 (Salmonella phage 146851_sal4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

95. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

96. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to NC_030919 (Salmonella phage 118970_sal4, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

97. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

98. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to J02473 (bacteriophage p22 tail protein (gene 9)) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

99. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

100. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

101. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

102. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

103. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

104. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

105. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

106. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to GQ422450 (Enterobacteria phage UAB_Phi20, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

107. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

108. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to NC_031946 (Salmonella Phage 103203_sal5, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

109. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

110. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

111. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MT932212 (Salmonella phage VSe13, complete genome) position: , mismatch: 8, identity: 0.75

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
atgttaaatattctatagctaattaaacctaa	Protospacer
 ****.********* ******** *  * *.

112. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

113. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 8, identity: 0.75

ctgttga-atattctaaagctaatttatacgag	CRISPR spacer
-tataaatatagtctaaatctaatttatacgca	Protospacer
 *.* .* *** ****** ************ .

114. spacer 2.98|3211238|32|NC_011138|PILER-CR matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcgtaaatggtaacggggccattcatccagc	CRISPR spacer
ggtggacaaggtaacggggccattcctacagc	Protospacer
  .* * * **************** * ****

115. spacer 2.102|3211482|32|NC_011138|PILER-CR matches to NC_022071 (Mycobacterium phage Crossroads, complete genome) position: , mismatch: 8, identity: 0.75

agcgtcagcggtcaatccaacctgtggcgcaa	CRISPR spacer
tgtgctagcggtcaatacaacgtgtggcgaga	Protospacer
 *.*..********** **** ******* .*

116. spacer 2.102|3211482|32|NC_011138|PILER-CR matches to KU234099 (Mycobacterium phage MkaliMitinis3, complete genome) position: , mismatch: 8, identity: 0.75

agcgtcagcggtcaatccaacctgtggcgcaa	CRISPR spacer
tgtgctagcggtcaatacaacgtgtggcgaga	Protospacer
 *.*..********** **** ******* .*

117. spacer 2.1|3208674|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_KX149096 (Staphylococcus aureus strain WG260 plasmid pWBG4, complete sequence) position: , mismatch: 9, identity: 0.719

tctcaatcaggaaatctttgatgaactctaaa	CRISPR spacer
ttaatttttggaaatctatgatgaaatctaaa	Protospacer
*.    *. ******** ******* ******

118. spacer 2.1|3208674|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_AP019752 (Staphylococcus aureus strain JRA307 plasmid pJRA307-1, complete sequence) position: , mismatch: 9, identity: 0.719

tctcaatcaggaaatctttgatgaactctaaa	CRISPR spacer
ttaatttttggaaatctatgatgaaatctaaa	Protospacer
*.    *. ******** ******* ******

119. spacer 2.1|3208674|32|NC_011138|CRISPRCasFinder,CRT matches to HQ634148 (Synechococcus phage S-CBS4, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces) position: , mismatch: 9, identity: 0.719

tctcaatcaggaaatctttgatgaactctaaa	CRISPR spacer
cctcaatcaggaaatccctgatgagcaatggg	Protospacer
.***************..******.*  *...

120. spacer 2.1|3208674|32|NC_011138|CRISPRCasFinder,CRT matches to HQ698895 (Synechococcus phage S-CBS4, complete genome) position: , mismatch: 9, identity: 0.719

tctcaatcaggaaatctttgatgaactctaaa	CRISPR spacer
cctcaatcaggaaatccctgatgagcaatggg	Protospacer
.***************..******.*  *...

121. spacer 2.5|3208919|32|NC_011138|CRISPRCasFinder,CRT matches to NC_003276 (Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120alpha, complete sequence) position: , mismatch: 9, identity: 0.719

ctttcaatggcacgaagagtctcacctgtacg	CRISPR spacer
atatcaatggcacgaagattctccccaacatc	Protospacer
 * *************** **** ** ..*.

122. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019095 (Synechococcus phage ACG-2014f isolate Syn7803US34, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

123. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019086 (Synechococcus phage ACG-2014f isolate Syn7803US17, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

124. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019106 (Synechococcus phage ACG-2014f isolate Syn7803US50, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

125. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019107 (Synechococcus phage ACG-2014f isolate Syn7803US52, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

126. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019143 (Synechococcus phage ACG-2014f isolate Syn7803C12, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

127. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019103 (Synechococcus phage ACG-2014f isolate Syn7803US44, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

128. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019102 (Synechococcus phage ACG-2014f isolate Syn7803US43, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

129. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019066 (Synechococcus phage ACG-2014f isolate Syn7803C9, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

130. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019142 (Synechococcus phage ACG-2014f isolate Syn7803C11, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

131. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019149 (Synechococcus phage ACG-2014f isolate Syn7803C21, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

132. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019105 (Synechococcus phage ACG-2014f isolate Syn7803US4, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

133. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019098 (Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

134. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019159 (Synechococcus phage ACG-2014f isolate Syn7803C34, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

135. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019123 (Synechococcus phage ACG-2014f isolate Syn7803US7, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

136. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019111 (Synechococcus phage ACG-2014f isolate Syn7803US57, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

137. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019148 (Synechococcus phage ACG-2014f isolate Syn7803C19, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

138. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to NC_047712 (Synechococcus phage ACG-2014f isolate Syn7803C7, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

139. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019090 (Synechococcus phage ACG-2014f isolate Syn7803US24, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

140. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019146 (Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

141. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019152 (Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

142. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019093 (Synechococcus phage ACG-2014f isolate Syn7803US30, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

143. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019151 (Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

144. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019150 (Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

145. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to NC_026927 (Synechococcus phage ACG-2014f isolate Syn7803C90, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

146. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019097 (Synechococcus phage ACG-2014f isolate Syn7803US37, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

147. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019045 (Synechococcus phage ACG-2014f isolate Syn7803C6, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

148. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019037 (Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

149. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019099 (Synechococcus phage ACG-2014f isolate Syn7803US3, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

150. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019155 (Synechococcus phage ACG-2014f isolate Syn7803C29, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

151. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019141 (Synechococcus phage ACG-2014f isolate Syn7803C10, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

152. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019053 (Synechococcus phage ACG-2014f isolate Syn7803C80, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

153. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019147 (Synechococcus phage ACG-2014f isolate Syn7803C17, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

154. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019100 (Synechococcus phage ACG-2014f isolate Syn7803US40, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

155. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019101 (Synechococcus phage ACG-2014f isolate Syn7803US42, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

156. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019085 (Synechococcus phage ACG-2014f isolate Syn7803US13, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

157. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019096 (Synechococcus phage ACG-2014f isolate Syn7803US36, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

158. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019091 (Synechococcus phage ACG-2014f isolate Syn7803US26, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

159. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019144 (Synechococcus phage ACG-2014f isolate Syn7803C14, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

160. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019145 (Synechococcus phage ACG-2014f isolate Syn7803C15, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

161. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019058 (Synechococcus phage ACG-2014f isolate Syn7803C8, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

162. spacer 2.8|3209102|32|NC_011138|CRISPRCasFinder,CRT matches to KJ019092 (Synechococcus phage ACG-2014f isolate Syn7803US2, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

163. spacer 2.15|3209529|32|NC_011138|CRISPRCasFinder,CRT matches to MG592547 (Vibrio phage 1.181.O._10N.286.46.C9, partial genome) position: , mismatch: 9, identity: 0.719

tgtgtggcgcttactggtttgcgccggtttcg	CRISPR spacer
tggtgaacgctgactggttggcgccggttttt	Protospacer
**   ..**** ******* **********.

164. spacer 2.17|3209651|32|NC_011138|CRISPRCasFinder,CRT matches to MT446392 (UNVERIFIED: Escherichia virus TH15, complete genome) position: , mismatch: 9, identity: 0.719

gcttgaataccatgatgatgaaacggcgatca	CRISPR spacer
agttgaataacatgatgatggaacgtctggct	Protospacer
. ******* **********.**** * . *

165. spacer 2.18|3209712|32|NC_011138|CRISPRCasFinder,CRT matches to MN310371 (Pseudomonas monteilii strain QJ20133 plasmid pJ20133-VIM, complete sequence) position: , mismatch: 9, identity: 0.719

ctaaaatctgctgcagaactcttttggcgcgc	CRISPR spacer
cgtacatctgctgcagaactggtttggctaca	Protospacer
*  * ***************  ******

166. spacer 2.19|3209773|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.719

taactattacgaagcgctggagtttgctaaaa	CRISPR spacer
gcaaaattatgaagcgttggagtttgcttcag	Protospacer
  *  ****.******.***********  *.

167. spacer 2.20|3209834|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP020716 (Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gaagacattgtaaagtccattcagttgccagg	CRISPR spacer
cgagacatggtgaagtccattcagttagtgag	Protospacer
 .****** **.**************. ...*

168. spacer 2.22|3209956|32|NC_011138|CRISPRCasFinder,CRT matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 9, identity: 0.719

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
ttattctaaatctgattcaagcggttcattaa	Protospacer
 . *   **** *********.*********

169. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP050185 (Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence) position: , mismatch: 9, identity: 0.719

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
ctgttgcatcttctaaagctaatgtttcttca	Protospacer
****** ** ************* * * .  .

170. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to AP013521 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-U-MedDCM-OCT-S42-C60) position: , mismatch: 9, identity: 0.719

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
caaatgaatctactaaagctaatttatcagct	Protospacer
* . ***** * ***************  *

171. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 9, identity: 0.719

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
agggggaattttctaaagctattttatagtat	Protospacer
  *  **** *********** ******  *

172. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 9, identity: 0.719

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
agggggaattttctaaagctattttatagtat	Protospacer
  *  **** *********** ******  *

173. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 9, identity: 0.719

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
cgtttgaatattctcaagctattttaggatat	Protospacer
*  *********** ****** **** .  *

174. spacer 2.39|3210993|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP014311 (Burkholderia sp. PAMC 26561 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

ccgccgaagcccattccgtcaatctgttttga	CRISPR spacer
ccgccgaagccaatgccgtcaatcgactgcag	Protospacer
*********** ** ********* ..* ...

175. spacer 2.39|3210993|32|NC_011138|CRISPRCasFinder,CRT matches to KU836751 (Bacillus phage Leo2, complete genome) position: , mismatch: 9, identity: 0.719

-----ccgccgaagcccattccgtcaatctgttttga	CRISPR spacer
atttttctc-----cccattacgtcaatctcttttga	Protospacer
     .* *     ****** ********* ******

176. spacer 2.42|3211176|32|NC_011138|CRISPRCasFinder,CRT matches to MT711978 (Streptomyces phage Endor1, complete genome) position: , mismatch: 9, identity: 0.719

cggtcggtatggcaggtcgtccacttcctgag	CRISPR spacer
ttcctggcctggctcgtcgtccacttcctgag	Protospacer
.  ..**. ****  *****************

177. spacer 2.43|3211237|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP020328 (Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgtaaatggtaacggggccattcatccagc	CRISPR spacer
ggtgggcaaggtaacggggccattcctacagc	Protospacer
  .* . * **************** * ****

178. spacer 2.43|3211237|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP019795 (Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgtaaatggtaacggggccattcatccagc	CRISPR spacer
ggtgggcaaggtaacggggccattcctacagc	Protospacer
  .* . * **************** * ****

179. spacer 2.43|3211237|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP019660 (Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgtaaatggtaacggggccattcatccagc	CRISPR spacer
ggtgggcaaggtaacggggccattcctacagc	Protospacer
  .* . * **************** * ****

180. spacer 2.43|3211237|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP019657 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgtaaatggtaacggggccattcatccagc	CRISPR spacer
ggtgggcaaggtaacggggccattcctacagc	Protospacer
  .* . * **************** * ****

181. spacer 2.44|3211298|32|NC_011138|CRISPRCasFinder,CRT matches to NC_019893 (Singulisphaera acidiphila DSM 18658 plasmid pSINAC01, complete sequence) position: , mismatch: 9, identity: 0.719

acgtagcgactgttgggttcggtggcggtcaa	CRISPR spacer
ccccgaagtctgttgcgttcggtggccgtcaa	Protospacer
 * ... * ****** ********** *****

182. spacer 2.56|3208675|32|NC_011138|PILER-CR matches to NZ_KX149096 (Staphylococcus aureus strain WG260 plasmid pWBG4, complete sequence) position: , mismatch: 9, identity: 0.719

tctcaatcaggaaatctttgatgaactctaaa	CRISPR spacer
ttaatttttggaaatctatgatgaaatctaaa	Protospacer
*.    *. ******** ******* ******

183. spacer 2.56|3208675|32|NC_011138|PILER-CR matches to NZ_AP019752 (Staphylococcus aureus strain JRA307 plasmid pJRA307-1, complete sequence) position: , mismatch: 9, identity: 0.719

tctcaatcaggaaatctttgatgaactctaaa	CRISPR spacer
ttaatttttggaaatctatgatgaaatctaaa	Protospacer
*.    *. ******** ******* ******

184. spacer 2.56|3208675|32|NC_011138|PILER-CR matches to HQ634148 (Synechococcus phage S-CBS4, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces) position: , mismatch: 9, identity: 0.719

tctcaatcaggaaatctttgatgaactctaaa	CRISPR spacer
cctcaatcaggaaatccctgatgagcaatggg	Protospacer
.***************..******.*  *...

185. spacer 2.56|3208675|32|NC_011138|PILER-CR matches to HQ698895 (Synechococcus phage S-CBS4, complete genome) position: , mismatch: 9, identity: 0.719

tctcaatcaggaaatctttgatgaactctaaa	CRISPR spacer
cctcaatcaggaaatccctgatgagcaatggg	Protospacer
.***************..******.*  *...

186. spacer 2.60|3208920|32|NC_011138|PILER-CR matches to NC_003276 (Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120alpha, complete sequence) position: , mismatch: 9, identity: 0.719

ctttcaatggcacgaagagtctcacctgtacg	CRISPR spacer
atatcaatggcacgaagattctccccaacatc	Protospacer
 * *************** **** ** ..*.

187. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019095 (Synechococcus phage ACG-2014f isolate Syn7803US34, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

188. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019086 (Synechococcus phage ACG-2014f isolate Syn7803US17, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

189. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019106 (Synechococcus phage ACG-2014f isolate Syn7803US50, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

190. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019107 (Synechococcus phage ACG-2014f isolate Syn7803US52, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

191. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019143 (Synechococcus phage ACG-2014f isolate Syn7803C12, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

192. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019103 (Synechococcus phage ACG-2014f isolate Syn7803US44, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

193. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019102 (Synechococcus phage ACG-2014f isolate Syn7803US43, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

194. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019066 (Synechococcus phage ACG-2014f isolate Syn7803C9, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

195. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019142 (Synechococcus phage ACG-2014f isolate Syn7803C11, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

196. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019149 (Synechococcus phage ACG-2014f isolate Syn7803C21, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

197. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019105 (Synechococcus phage ACG-2014f isolate Syn7803US4, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

198. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019098 (Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

199. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019159 (Synechococcus phage ACG-2014f isolate Syn7803C34, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

200. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019123 (Synechococcus phage ACG-2014f isolate Syn7803US7, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

201. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019111 (Synechococcus phage ACG-2014f isolate Syn7803US57, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

202. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019148 (Synechococcus phage ACG-2014f isolate Syn7803C19, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

203. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to NC_047712 (Synechococcus phage ACG-2014f isolate Syn7803C7, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

204. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019090 (Synechococcus phage ACG-2014f isolate Syn7803US24, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

205. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019146 (Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

206. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019152 (Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

207. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019093 (Synechococcus phage ACG-2014f isolate Syn7803US30, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

208. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019151 (Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

209. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019150 (Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

210. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to NC_026927 (Synechococcus phage ACG-2014f isolate Syn7803C90, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

211. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019097 (Synechococcus phage ACG-2014f isolate Syn7803US37, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

212. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019045 (Synechococcus phage ACG-2014f isolate Syn7803C6, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

213. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019037 (Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

214. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019099 (Synechococcus phage ACG-2014f isolate Syn7803US3, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

215. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019155 (Synechococcus phage ACG-2014f isolate Syn7803C29, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

216. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019141 (Synechococcus phage ACG-2014f isolate Syn7803C10, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

217. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019053 (Synechococcus phage ACG-2014f isolate Syn7803C80, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

218. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019147 (Synechococcus phage ACG-2014f isolate Syn7803C17, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

219. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019100 (Synechococcus phage ACG-2014f isolate Syn7803US40, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

220. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019101 (Synechococcus phage ACG-2014f isolate Syn7803US42, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

221. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019085 (Synechococcus phage ACG-2014f isolate Syn7803US13, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

222. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019096 (Synechococcus phage ACG-2014f isolate Syn7803US36, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

223. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019091 (Synechococcus phage ACG-2014f isolate Syn7803US26, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

224. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019144 (Synechococcus phage ACG-2014f isolate Syn7803C14, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

225. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019145 (Synechococcus phage ACG-2014f isolate Syn7803C15, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

226. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019058 (Synechococcus phage ACG-2014f isolate Syn7803C8, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

227. spacer 2.63|3209103|32|NC_011138|PILER-CR matches to KJ019092 (Synechococcus phage ACG-2014f isolate Syn7803US2, complete genome) position: , mismatch: 9, identity: 0.719

gcatcatcttcaatggtccagtagtctgaaca	CRISPR spacer
actccatcttcaatggtccagcactcttcaat	Protospacer
.* .*****************.* ***  *

228. spacer 2.70|3209530|32|NC_011138|PILER-CR matches to MG592547 (Vibrio phage 1.181.O._10N.286.46.C9, partial genome) position: , mismatch: 9, identity: 0.719

tgtgtggcgcttactggtttgcgccggtttcg	CRISPR spacer
tggtgaacgctgactggttggcgccggttttt	Protospacer
**   ..**** ******* **********.

229. spacer 2.72|3209652|32|NC_011138|PILER-CR matches to MT446392 (UNVERIFIED: Escherichia virus TH15, complete genome) position: , mismatch: 9, identity: 0.719

gcttgaataccatgatgatgaaacggcgatca	CRISPR spacer
agttgaataacatgatgatggaacgtctggct	Protospacer
. ******* **********.**** * . *

230. spacer 2.73|3209713|32|NC_011138|PILER-CR matches to MN310371 (Pseudomonas monteilii strain QJ20133 plasmid pJ20133-VIM, complete sequence) position: , mismatch: 9, identity: 0.719

ctaaaatctgctgcagaactcttttggcgcgc	CRISPR spacer
cgtacatctgctgcagaactggtttggctaca	Protospacer
*  * ***************  ******

231. spacer 2.74|3209774|32|NC_011138|PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.719

taactattacgaagcgctggagtttgctaaaa	CRISPR spacer
gcaaaattatgaagcgttggagtttgcttcag	Protospacer
  *  ****.******.***********  *.

232. spacer 2.75|3209835|32|NC_011138|PILER-CR matches to NZ_CP020716 (Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gaagacattgtaaagtccattcagttgccagg	CRISPR spacer
cgagacatggtgaagtccattcagttagtgag	Protospacer
 .****** **.**************. ...*

233. spacer 2.77|3209957|32|NC_011138|PILER-CR matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 9, identity: 0.719

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
ttattctaaatctgattcaagcggttcattaa	Protospacer
 . *   **** *********.*********

234. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to NZ_CP050185 (Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence) position: , mismatch: 9, identity: 0.719

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
ctgttgcatcttctaaagctaatgtttcttca	Protospacer
****** ** ************* * * .  .

235. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to AP013521 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-U-MedDCM-OCT-S42-C60) position: , mismatch: 9, identity: 0.719

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
caaatgaatctactaaagctaatttatcagct	Protospacer
* . ***** * ***************  *

236. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 9, identity: 0.719

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
agggggaattttctaaagctattttatagtat	Protospacer
  *  **** *********** ******  *

237. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 9, identity: 0.719

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
agggggaattttctaaagctattttatagtat	Protospacer
  *  **** *********** ******  *

238. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 9, identity: 0.719

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
cgtttgaatattctcaagctattttaggatat	Protospacer
*  *********** ****** **** .  *

239. spacer 2.94|3210994|32|NC_011138|PILER-CR matches to NZ_CP014311 (Burkholderia sp. PAMC 26561 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

ccgccgaagcccattccgtcaatctgttttga	CRISPR spacer
ccgccgaagccaatgccgtcaatcgactgcag	Protospacer
*********** ** ********* ..* ...

240. spacer 2.94|3210994|32|NC_011138|PILER-CR matches to KU836751 (Bacillus phage Leo2, complete genome) position: , mismatch: 9, identity: 0.719

-----ccgccgaagcccattccgtcaatctgttttga	CRISPR spacer
atttttctc-----cccattacgtcaatctcttttga	Protospacer
     .* *     ****** ********* ******

241. spacer 2.97|3211177|32|NC_011138|PILER-CR matches to MT711978 (Streptomyces phage Endor1, complete genome) position: , mismatch: 9, identity: 0.719

cggtcggtatggcaggtcgtccacttcctgag	CRISPR spacer
ttcctggcctggctcgtcgtccacttcctgag	Protospacer
.  ..**. ****  *****************

242. spacer 2.98|3211238|32|NC_011138|PILER-CR matches to NZ_CP020328 (Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgtaaatggtaacggggccattcatccagc	CRISPR spacer
ggtgggcaaggtaacggggccattcctacagc	Protospacer
  .* . * **************** * ****

243. spacer 2.98|3211238|32|NC_011138|PILER-CR matches to NZ_CP019795 (Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgtaaatggtaacggggccattcatccagc	CRISPR spacer
ggtgggcaaggtaacggggccattcctacagc	Protospacer
  .* . * **************** * ****

244. spacer 2.98|3211238|32|NC_011138|PILER-CR matches to NZ_CP019660 (Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgtaaatggtaacggggccattcatccagc	CRISPR spacer
ggtgggcaaggtaacggggccattcctacagc	Protospacer
  .* . * **************** * ****

245. spacer 2.98|3211238|32|NC_011138|PILER-CR matches to NZ_CP019657 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgtaaatggtaacggggccattcatccagc	CRISPR spacer
ggtgggcaaggtaacggggccattcctacagc	Protospacer
  .* . * **************** * ****

246. spacer 2.99|3211299|32|NC_011138|PILER-CR matches to NC_019893 (Singulisphaera acidiphila DSM 18658 plasmid pSINAC01, complete sequence) position: , mismatch: 9, identity: 0.719

acgtagcgactgttgggttcggtggcggtcaa	CRISPR spacer
ccccgaagtctgttgcgttcggtggccgtcaa	Protospacer
 * ... * ****** ********** *****

247. spacer 2.2|3208735|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP013298 (Arthrobacter sp. YC-RL1 plasmid unnamed 1, complete sequence) position: , mismatch: 10, identity: 0.688

gacccgccaccaacatctacacgctggcctga	CRISPR spacer
tcagcgccaccaccatctacaccctggacaac	Protospacer
    ******** ********* **** * .

248. spacer 2.2|3208735|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

gacccgccaccaacatctacacgctggcctga	CRISPR spacer
ccttcgccaccaacatcggcacgctggtcaag	Protospacer
  ..************* .********.* ..

249. spacer 2.16|3209590|32|NC_011138|CRISPRCasFinder,CRT matches to MN692989 (Marine virus AFVG_117M66, complete genome) position: , mismatch: 10, identity: 0.688

ttgttaacggttaactcgccttctacttcgcg	CRISPR spacer
gtattaaccgctaactcgccttctaccaaatc	Protospacer
 *.***** *.***************.  ..

250. spacer 2.18|3209712|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_AP015030 (Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence) position: , mismatch: 10, identity: 0.688

ctaaaatctgctgcagaactcttttggcgcgc	CRISPR spacer
cgtgcatctgctgcagaactggtttggctaca	Protospacer
*  . ***************  ******

251. spacer 2.18|3209712|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_AP015030 (Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence) position: , mismatch: 10, identity: 0.688

ctaaaatctgctgcagaactcttttggcgcgc	CRISPR spacer
cgtgcatctgctgcagaactggtttggctaca	Protospacer
*  . ***************  ******

252. spacer 2.36|3210810|32|NC_011138|CRISPRCasFinder,CRT matches to AP014210 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C81-MedDCM-OCT-S26-C128, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

ttaaaagtacgttaaatgccatatttggtccg	CRISPR spacer
tatcaactacgttaaattccatatttgcaaga	Protospacer
*   ** ********** *********    .

253. spacer 2.36|3210810|32|NC_011138|CRISPRCasFinder,CRT matches to AP014211 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C81-MedDCM-OCT-S44-C144, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

ttaaaagtacgttaaatgccatatttggtccg	CRISPR spacer
tatcaactacgttaaattccatatttgcaaga	Protospacer
*   ** ********** *********    .

254. spacer 2.39|3210993|32|NC_011138|CRISPRCasFinder,CRT matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 10, identity: 0.688

ccgccgaagcccattccgtcaatctgttttga	CRISPR spacer
ctttcgaagcccatgccggcaatctgtgcaat	Protospacer
*. .********** *** ******** . .

255. spacer 2.42|3211176|32|NC_011138|CRISPRCasFinder,CRT matches to MT711979 (Streptomyces phage Endor2, complete genome) position: , mismatch: 10, identity: 0.688

cggtcggtatggcaggtcgtccacttcctgag	CRISPR spacer
ttcctcgcgtggctcgtcgtccacttcctgag	Protospacer
.  .. *..****  *****************

256. spacer 2.42|3211176|32|NC_011138|CRISPRCasFinder,CRT matches to NC_041856 (Streptomyces phage phiCAM, complete genome) position: , mismatch: 10, identity: 0.688

cggtcggtatggcaggtcgtccacttcctgag	CRISPR spacer
ttcctcgcgtggctcgtcgtccacttcctgag	Protospacer
.  .. *..****  *****************

257. spacer 2.48|3211542|32|NC_011138|CRISPRCasFinder,CRT matches to NC_014838 (Pantoea sp. At-9b plasmid pPAT9B01, complete sequence) position: , mismatch: 10, identity: 0.688

ttctttaattttgcgcgataaattgcgagacc	CRISPR spacer
ggggttaattctgcgcgataaatcgcgccgct	Protospacer
    ******.************.***  .*.

258. spacer 2.57|3208736|32|NC_011138|PILER-CR matches to NZ_CP013298 (Arthrobacter sp. YC-RL1 plasmid unnamed 1, complete sequence) position: , mismatch: 10, identity: 0.688

gacccgccaccaacatctacacgctggcctga	CRISPR spacer
tcagcgccaccaccatctacaccctggacaac	Protospacer
    ******** ********* **** * .

259. spacer 2.57|3208736|32|NC_011138|PILER-CR matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

gacccgccaccaacatctacacgctggcctga	CRISPR spacer
ccttcgccaccaacatcggcacgctggtcaag	Protospacer
  ..************* .********.* ..

260. spacer 2.71|3209591|32|NC_011138|PILER-CR matches to MN692989 (Marine virus AFVG_117M66, complete genome) position: , mismatch: 10, identity: 0.688

ttgttaacggttaactcgccttctacttcgcg	CRISPR spacer
gtattaaccgctaactcgccttctaccaaatc	Protospacer
 *.***** *.***************.  ..

261. spacer 2.73|3209713|32|NC_011138|PILER-CR matches to NZ_AP015030 (Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence) position: , mismatch: 10, identity: 0.688

ctaaaatctgctgcagaactcttttggcgcgc	CRISPR spacer
cgtgcatctgctgcagaactggtttggctaca	Protospacer
*  . ***************  ******

262. spacer 2.73|3209713|32|NC_011138|PILER-CR matches to NZ_AP015030 (Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence) position: , mismatch: 10, identity: 0.688

ctaaaatctgctgcagaactcttttggcgcgc	CRISPR spacer
cgtgcatctgctgcagaactggtttggctaca	Protospacer
*  . ***************  ******

263. spacer 2.91|3210811|32|NC_011138|PILER-CR matches to AP014210 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C81-MedDCM-OCT-S26-C128, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

ttaaaagtacgttaaatgccatatttggtccg	CRISPR spacer
tatcaactacgttaaattccatatttgcaaga	Protospacer
*   ** ********** *********    .

264. spacer 2.91|3210811|32|NC_011138|PILER-CR matches to AP014211 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C81-MedDCM-OCT-S44-C144, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

ttaaaagtacgttaaatgccatatttggtccg	CRISPR spacer
tatcaactacgttaaattccatatttgcaaga	Protospacer
*   ** ********** *********    .

265. spacer 2.94|3210994|32|NC_011138|PILER-CR matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 10, identity: 0.688

ccgccgaagcccattccgtcaatctgttttga	CRISPR spacer
ctttcgaagcccatgccggcaatctgtgcaat	Protospacer
*. .********** *** ******** . .

266. spacer 2.97|3211177|32|NC_011138|PILER-CR matches to MT711979 (Streptomyces phage Endor2, complete genome) position: , mismatch: 10, identity: 0.688

cggtcggtatggcaggtcgtccacttcctgag	CRISPR spacer
ttcctcgcgtggctcgtcgtccacttcctgag	Protospacer
.  .. *..****  *****************

267. spacer 2.97|3211177|32|NC_011138|PILER-CR matches to NC_041856 (Streptomyces phage phiCAM, complete genome) position: , mismatch: 10, identity: 0.688

cggtcggtatggcaggtcgtccacttcctgag	CRISPR spacer
ttcctcgcgtggctcgtcgtccacttcctgag	Protospacer
.  .. *..****  *****************

268. spacer 2.103|3211543|32|NC_011138|PILER-CR matches to NC_014838 (Pantoea sp. At-9b plasmid pPAT9B01, complete sequence) position: , mismatch: 10, identity: 0.688

ttctttaattttgcgcgataaattgcgagacc	CRISPR spacer
ggggttaattctgcgcgataaatcgcgccgct	Protospacer
    ******.************.***  .*.

269. spacer 2.22|3209956|32|NC_011138|CRISPRCasFinder,CRT matches to NZ_CP008919 (Providencia stuartii strain ATCC 33672 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
taatgaagaatatgatttaagtggttgtgccg	Protospacer
   ****.*********.********   .

270. spacer 2.38|3210932|32|NC_011138|CRISPRCasFinder,CRT matches to MN693823 (Marine virus AFVG_250M431, complete genome) position: , mismatch: 11, identity: 0.656

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
aatctgaatatgctatagctaatttatttcgt	Protospacer
   .******* *** *********** . .

271. spacer 2.77|3209957|32|NC_011138|PILER-CR matches to NZ_CP008919 (Providencia stuartii strain ATCC 33672 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

gcttgaaaaatatgattcaagtggttcattat	CRISPR spacer
taatgaagaatatgatttaagtggttgtgccg	Protospacer
   ****.*********.********   .

272. spacer 2.93|3210933|32|NC_011138|PILER-CR matches to MN693823 (Marine virus AFVG_250M431, complete genome) position: , mismatch: 11, identity: 0.656

ctgttgaatattctaaagctaatttatacgag	CRISPR spacer
aatctgaatatgctatagctaatttatttcgt	Protospacer
   .******* *** *********** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

646025 : 673058

Acinetobacter_phage(50.0%)

transposase,integrase

attL 656690:656704|attR 683049:683063

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012517123.1\|646025_647072_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_012517124.1\|647506_647767_-	DUF2442 domain-containing protein	NA	NA	NA	NA
WP_012517125.1\|647771_648029_-	DUF4160 domain-containing protein	NA	NA	NA	NA
WP_012517126.1\|648231_648483_-	hypothetical protein	NA	NA	NA	NA
WP_012517127.1\|648613_648856_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_012517128.1\|648852_649155_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_012517129.1\|649522_649786_-	hypothetical protein	NA	NA	NA	NA
WP_012517130.1\|650070_650550_-	hypothetical protein	NA	NA	NA	NA
WP_148291036.1\|650663_651191_-	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_012517123.1\|651949_652996_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_041912814.1\|653887_654196_-	hypothetical protein	NA	NA	NA	NA
WP_012517136.1\|654931_655969_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_023559504.1\|656230_656830_-	hypothetical protein	NA	NA	NA	NA
656690:656704	attL	NA	NA	NA	NA
WP_012517138.1\|656991_657180_-	hypothetical protein	NA	NA	NA	NA
WP_012517139.1\|657324_657687_-	hypothetical protein	NA	NA	NA	NA
WP_012517140.1\|657805_658255_-	hypothetical protein	NA	NA	NA	NA
WP_012517142.1\|658839_659547_-	hypothetical protein	NA	NA	NA	NA
WP_012517143.1\|659664_660213_-	hypothetical protein	NA	NA	NA	NA
WP_012517144.1\|660327_661113_-	hypothetical protein	NA	NA	NA	NA
WP_012517145.1\|661262_661631_-	hypothetical protein	NA	NA	NA	NA
WP_012517146.1\|661736_662150_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_020744876.1\|662781_663120_-	hypothetical protein	NA	NA	NA	NA
WP_012517148.1\|663227_663683_-	hypothetical protein	NA	NA	NA	NA
WP_085929700.1\|664259_665427_+\|transposase	IS3-like element ISAma1 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.6e-58	41.6
WP_167539666.1\|665943_666174_-	hypothetical protein	NA	NA	NA	NA
WP_041912815.1\|666290_666713_-	hypothetical protein	NA	NA	NA	NA
WP_148291021.1\|666830_667130_-	hypothetical protein	NA	NA	NA	NA
WP_012517155.1\|667306_667645_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_012517136.1\|667826_668864_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_012517158.1\|669904_670405_-	hypothetical protein	NA	NA	NA	NA
WP_012517159.1\|670444_670729_-	hypothetical protein	NA	NA	NA	NA
WP_020744878.1\|670866_671232_-	hypothetical protein	NA	NA	NA	NA
WP_012517161.1\|671350_671797_-	hypothetical protein	NA	NA	NA	NA
WP_012517162.1\|672089_673058_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.7e-55	41.4
683049:683063	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1016883 : 1025588

Streptococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012517443.1\|1016883_1018176_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	4.2e-134	59.8
WP_012517444.1\|1018235_1019867_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	3.2e-147	50.2
WP_012517445.1\|1020003_1022595_-	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	6.4e-33	21.7
WP_012517446.1\|1022755_1023295_+	CinA family protein	B5TK85	Pseudomonas_phage	1.0e-25	45.2
WP_012517447.1\|1023415_1024462_+	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	2.5e-116	62.8
WP_012517448.1\|1024766_1025588_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-26	33.2

DBSCAN-SWA_3

1117000 : 1176271

Leptospira_phage(25.0%)

transposase,tRNA,integrase

attL 1124136:1124159|attR 1130500:1130523

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023559543.1\|1117000_1118578_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-39	30.5
WP_023559544.1\|1118549_1118945_+	hypothetical protein	NA	NA	NA	NA
WP_023559545.1\|1118965_1120201_+	DUF4158 domain-containing protein	NA	NA	NA	NA
WP_041912837.1\|1120677_1121298_-	organomercurial lyase MerB	NA	NA	NA	NA
WP_007106067.1\|1121515_1121869_+	mercury transporter MerT	NA	NA	NA	NA
WP_080663258.1\|1121885_1122209_+	cation transporter	NA	NA	NA	NA
WP_007106065.1\|1122573_1122921_+	mercury transporter	NA	NA	NA	NA
WP_007106064.1\|1123020_1123422_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_012517601.1\|1123718_1124105_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
1124136:1124159	attL	NA	NA	NA	NA
WP_012517603.1\|1127676_1128726_-	DNA-binding protein	NA	NA	NA	NA
WP_012517604.1\|1128931_1129942_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_012517605.1\|1130077_1130473_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_023559547.1\|1130621_1132025_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	7.0e-42	29.4
1130500:1130523	attR	NA	NA	NA	NA
WP_023559548.1\|1132038_1132674_+	organomercurial lyase MerB	NA	NA	NA	NA
WP_137093190.1\|1132681_1133086_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_008295681.1\|1133163_1133394_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_012517609.1\|1133489_1133942_+	DoxX family protein	NA	NA	NA	NA
WP_008295684.1\|1134250_1134646_+	group III truncated hemoglobin	NA	NA	NA	NA
WP_008295685.1\|1134734_1136036_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_012517611.1\|1136047_1136851_+	sterol desaturase family protein	NA	NA	NA	NA
WP_012517612.1\|1136942_1139915_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.5e-78	27.3
WP_012517615.1\|1140773_1142141_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_012517616.1\|1142141_1142738_+	response regulator transcription factor	NA	NA	NA	NA
WP_080653170.1\|1142712_1143096_-	EAL domain-containing protein	NA	NA	NA	NA
WP_012517619.1\|1143368_1144553_-	flagellar assembly protein T N-terminal domain-containing protein	NA	NA	NA	NA
WP_012517620.1\|1144851_1145337_+	LPP20 family lipoprotein	NA	NA	NA	NA
WP_012517621.1\|1145383_1145815_-	flagellar protein FlgN	NA	NA	NA	NA
WP_012517622.1\|1145845_1146175_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
WP_015066430.1\|1146277_1146994_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA
WP_015066431.1\|1147265_1148195_+	chemotaxis protein CheV	Q56AR1	Bacillus_thuringiensis_phage	7.0e-30	30.4
WP_012517625.1\|1148210_1149041_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_012517626.1\|1149237_1149672_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA
WP_012517627.1\|1149674_1150097_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA
WP_012517628.1\|1150128_1150815_+	flagellar hook assembly protein FlgD	NA	NA	NA	NA
WP_012517629.1\|1150829_1152215_+	flagellar hook protein FlgE	NA	NA	NA	NA
WP_012517630.1\|1152439_1153183_+	flagellar basal body rod protein FlgF	NA	NA	NA	NA
WP_012517631.1\|1153229_1154018_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
WP_012517632.1\|1154029_1154710_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA
WP_012517633.1\|1154730_1155843_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA
WP_012517634.1\|1155903_1156854_+	flagellar assembly peptidoglycan hydrolase FlgJ	D6PHK9	uncultured_phage	5.5e-06	26.9
WP_012517635.1\|1156870_1158913_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA
WP_012517636.1\|1158920_1160135_+	flagellar hook-associated protein FlgL	NA	NA	NA	NA
WP_012517637.1\|1160664_1161624_+	flagellin	NA	NA	NA	NA
WP_012517639.1\|1162111_1163071_+	flagellin	NA	NA	NA	NA
WP_012517640.1\|1163144_1163660_+	flagellar protein FlaG	NA	NA	NA	NA
WP_012517641.1\|1163688_1165104_+	flagellar filament capping protein FliD	NA	NA	NA	NA
WP_023559551.1\|1165140_1165569_+	flagellar export chaperone FliS	NA	NA	NA	NA
WP_012517643.1\|1165561_1165858_+	hypothetical protein	NA	NA	NA	NA
WP_012517644.1\|1165869_1167972_+	motility associated factor glycosyltransferase family protein	NA	NA	NA	NA
WP_041912755.1\|1168259_1168937_+	PIG-L family deacetylase	A0A1L6BYV0	Mycobacterium_phage	4.3e-05	28.3
WP_012517646.1\|1168933_1169602_+\|tRNA	methionyl-tRNA formyltransferase	NA	NA	NA	NA
WP_012517649.1\|1170257_1171301_+	pseudaminic acid synthase	NA	NA	NA	NA
WP_012517650.1\|1171519_1172563_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_012516695.1\|1173031_1174666_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_012517651.1\|1174962_1175154_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	6.0e-05	45.8
WP_088123849.1\|1175202_1176271_+\|transposase	IS3-like element ISAma2 family transposase	S5WIU1	Leptospira_phage	3.5e-41	37.3

DBSCAN-SWA_4

2173388 : 2244236

Vibrio_phage(13.33%)

tRNA,integrase,transposase,protease

attL 2181675:2181690|attR 2216279:2216294

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012518380.1\|2173388_2175056_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	3.5e-242	71.7
WP_012518381.1\|2175181_2175928_-	YciK family oxidoreductase	NA	NA	NA	NA
WP_023559704.1\|2176278_2178876_+	hypothetical protein	NA	NA	NA	NA
WP_012518383.1\|2179128_2181654_+	acylase	NA	NA	NA	NA
2181675:2181690	attL	NA	NA	NA	NA
WP_012518384.1\|2181772_2182795_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	7.7e-22	27.6
WP_012518385.1\|2182906_2183530_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_012518386.1\|2183629_2183944_-	hypothetical protein	NA	NA	NA	NA
WP_174377458.1\|2184196_2184952_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_012518388.1\|2184967_2185711_+	methyltransferase	NA	NA	NA	NA
WP_012518389.1\|2185707_2186733_-	2-hydroxyacid dehydrogenase	M1H214	Paramecium_bursaria_Chlorella_virus	1.9e-60	41.0
WP_167539667.1\|2186788_2187286_-	redoxin domain-containing protein	A0A1S7DLQ4	Molluscum_contagiosum_virus	4.6e-12	31.2
WP_012518391.1\|2187367_2188243_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_071960415.1\|2188338_2189922_-	response regulator	NA	NA	NA	NA
WP_012518393.1\|2190179_2191334_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_012518394.1\|2191418_2192549_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_012518396.1\|2192743_2193616_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_012518398.1\|2194308_2195835_-	DUF3413 domain-containing protein	NA	NA	NA	NA
WP_012518399.1\|2195843_2196062_-	DUF1414 domain-containing protein	NA	NA	NA	NA
WP_012518400.1\|2196221_2197328_+	nucleoid-associated protein YejK	A0A1V0E8C0	Vibrio_phage	2.1e-49	33.2
WP_012518401.1\|2197443_2198319_+	6-carboxytetrahydropterin synthase	A0A140B3G6	Vibrio_phage	1.3e-17	28.8
WP_012518402.1\|2198360_2199278_+	M23 family metallopeptidase	A0A7K9	Microcystis_virus	5.5e-11	37.1
WP_012518403.1\|2199358_2201161_-	M61 family metallopeptidase	NA	NA	NA	NA
WP_012518404.1\|2201353_2202037_+	flagellar brake protein	NA	NA	NA	NA
WP_012518405.1\|2202109_2202571_+	DUF962 domain-containing protein	NA	NA	NA	NA
WP_012518406.1\|2202720_2203794_+	histidine kinase	Q9EYF3	Enterobacteria_phage	4.1e-26	34.8
WP_012518407.1\|2203795_2204623_+	response regulator transcription factor	A0A2R2ZGH8	Clostridioides_phage	1.7e-11	23.4
WP_041703295.1\|2204697_2205708_-	ATP-dependent 6-phosphofructokinase	NA	NA	NA	NA
WP_012518409.1\|2205909_2206752_+	hypothetical protein	NA	NA	NA	NA
WP_012518410.1\|2207186_2207642_-	PaaI family thioesterase	NA	NA	NA	NA
WP_012518412.1\|2208138_2209242_-\|transposase	ISAs1-like element ISAma3 family transposase	NA	NA	NA	NA
WP_012518414.1\|2209958_2210966_-	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_012518415.1\|2210988_2211996_-	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_012518416.1\|2212070_2212829_-	SDR family oxidoreductase	A0A2P0VP75	Tetraselmis_virus	1.0e-07	28.7
WP_041912891.1\|2212984_2213878_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012518418.1\|2213969_2214431_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_012518419.1\|2214939_2215353_-	hypothetical protein	NA	NA	NA	NA
WP_023559708.1\|2215524_2216316_-\|protease	trypsin-like serine protease	NA	NA	NA	NA
2216279:2216294	attR	NA	NA	NA	NA
WP_012518421.1\|2216703_2218215_+\|transposase	ISNCY family transposase	A0A0M3LR35	Mannheimia_phage	1.7e-17	40.5
WP_012518422.1\|2218302_2218689_-	hypothetical protein	NA	NA	NA	NA
WP_012518423.1\|2219002_2219800_-	TIGR03915 family putative DNA repair protein	NA	NA	NA	NA
WP_012518424.1\|2219816_2221058_-	putative DNA modification/repair radical SAM protein	NA	NA	NA	NA
WP_012518425.1\|2221378_2223019_-	response regulator	NA	NA	NA	NA
WP_012518426.1\|2223140_2223695_+	hypothetical protein	NA	NA	NA	NA
WP_012518427.1\|2223861_2224857_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_012518428.1\|2224915_2225158_+	EF-hand domain-containing protein	NA	NA	NA	NA
WP_012518429.1\|2225399_2226725_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.8e-40	30.6
WP_012518430.1\|2226934_2227588_-	CoA transferase subunit B	NA	NA	NA	NA
WP_012518431.1\|2227587_2228295_-	CoA transferase subunit A	NA	NA	NA	NA
WP_023559709.1\|2228417_2229302_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_015067249.1\|2229372_2230131_-	hypothetical protein	NA	NA	NA	NA
WP_012518434.1\|2230226_2230931_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_012518435.1\|2231140_2232115_+	HTH-type transcriptional regulator CysB	NA	NA	NA	NA
WP_012518437.1\|2233803_2234376_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_023559710.1\|2234424_2235885_-	aminodeoxychorismate synthase component I	A0A0B5J984	Pandoravirus	5.6e-42	41.5
WP_012518439.1\|2236172_2237702_+	fumarate hydratase	NA	NA	NA	NA
WP_012518441.1\|2237926_2239216_+	DNA recombination protein RmuC	R9RFD7	Alteromonas_phage	4.7e-08	50.0
WP_012518442.1\|2239260_2243226_-	S8 family serine peptidase	NA	NA	NA	NA
WP_012518443.1\|2243474_2244236_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.1e-12	31.5

DBSCAN-SWA_5

4435543 : 4446586

Organic_Lake_phycodnavirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012518686.1\|4435543_4438801_-	DEAD/DEAH box helicase	F2Y0S4	Organic_Lake_phycodnavirus	2.8e-09	22.5
WP_041702929.1\|4438797_4439595_-	hypothetical protein	NA	NA	NA	NA
WP_012518684.1\|4439613_4441755_-	N-6 DNA methylase	A0A220A2U4	Liberibacter_phage	5.9e-24	27.3
WP_012518683.1\|4441775_4444166_-	DEAD/DEAH box helicase family protein	Q5YA94	Bacillus_phage	1.7e-24	26.1
WP_001083515.1\|4444167_4444365_-	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	1.2e-16	56.5
WP_012518682.1\|4444614_4446357_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	9.3e-60	32.2
WP_007146785.1\|4446343_4446586_-	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	1.5e-08	45.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_011138

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection