CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_011149	Salmonella enterica subsp. enterica serovar Agona str. SL483, complete sequence	2 crisprs	DEDDh,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK	0	15	7	0
NC_011148	Salmonella enterica subsp. enterica serovar Agona str. SL483 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_011149_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011149_1

2988105-2989231

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

18 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NC_011149_1

>merge|NC_011149|1|2988105-2989231|CRISPRCasFinder,CRT,PILER-CR
GTGTTTATCCCCGCTGACGCGGGGAACATTTTTCAGCCCTTGCCGACTGCGGAACGCCCCTCGGTTTATCCCCGCTGGCGCGGGGAACACATGGATGGCTCATATCCGGTTTCTGTTTCTGCCGGTTTATCCCCGCTGGCGCGGGGAACACGCGAAATAGTGGGGAAAAACCCCTGGTTAACCCGGTTTATCCCCGCTGGCGCGGGAAACACTAGGCCTTGATACCATCGCTCGCACCTCGTCACGGTTTATCCCCGCTGGCGCGGGGAACACATATTGATACTGTTCTCAAGCGCCGTTTTAGCCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCGCCAGAAATATTCATGATCATCGGGATTCGGTTTATCCCCGCTGGCGCGGGGAACACTTCATATTCCAGAAAATGCCTGGGTGATGATCCGGTTTATCCCCGCTGGCGCGGGGAACACGTGGTATCTCCTGTCGACCTTGCCGTTAAAATCGGTTTATCCCCGCTGGCGCGGGGAACACTATAACTGGCGGGTTTTAGTGTCGTTATAAAACGGTTTATCCCCGCTGGCGCGGGGAACACTCAGGCTTGACGACAGTCTCCAGCCACTCCTGCGGTTTATCCCCGCTGGCGCGGGGAACACGACCGCGCGGGCTATCGTTCAGGACTATTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGAAGATATTGAAAGCGCCCAATCTTCCCAGCGGTTTATCCCCGCTGGCGCGGGGAACACCTCTGTTACACCGTTATGCACAGACCACACAGCGGTTTATCCCCGCTGGCGCGGGGAACACGTTAATGCAAGCGCCATTAACAAGAAAATGACCGGTTTATCCCCGCTGGCGCGGGGAACACAGCTCCGGCAGGGTCATGTCCCGGCAGGTGCGCGGTTTATCCCCGCTGGCGCGGGGAACACGTTGTGACGAGTTCGTCGTCTTTTTTTTCGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTAGGGAACCTGGCTAAAGTGTCTGAAGGCTACCGGTTTATCCCCGCTGGCGCGGGGAACACAATTTTTCTGCGGCCAGCGCGGCCAGCGCCTCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_011149|1|1|2988105-2989231|CRISPRCasFinder
GTGTTTATCCCCGCTGACGCGGGGAACAT	TTTTCAGCCCTTGCCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGGATGGCTCATATCCGGTTTCTGTTTCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATTGATACTGTTCTCAAGCGCCGTTTTAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCGCCAGAAATATTCATGATCATCGGGATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATATTCCAGAAAATGCCTGGGTGATGATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTATCTCCTGTCGACCTTGCCGTTAAAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATAACTGGCGGGTTTTAGTGTCGTTATAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCAGGCTTGACGACAGTCTCCAGCCACTCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACCGCGCGGGCTATCGTTCAGGACTATTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGAAGATATTGAAAGCGCCCAATCTTCCCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCTGTTACACCGTTATGCACAGACCACACAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTAATGCAAGCGCCATTAACAAGAAAATGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCTCCGGCAGGGTCATGTCCCGGCAGGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTGTGACGAGTTCGTCGTCTTTTTTTTCGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGGGAACCTGGCTAAAGTGTCTGAAGGCTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTTCTGCGGCCAGCGCGGCCAGCGCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_011149|1|1|2988105-2989231|CRT
GTGTTTATCCCCGCTGACGCGGGGAACAT	TTTTCAGCCCTTGCCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGGATGGCTCATATCCGGTTTCTGTTTCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATTGATACTGTTCTCAAGCGCCGTTTTAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCGCCAGAAATATTCATGATCATCGGGATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATATTCCAGAAAATGCCTGGGTGATGATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTATCTCCTGTCGACCTTGCCGTTAAAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATAACTGGCGGGTTTTAGTGTCGTTATAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCAGGCTTGACGACAGTCTCCAGCCACTCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACCGCGCGGGCTATCGTTCAGGACTATTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGAAGATATTGAAAGCGCCCAATCTTCCCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCTGTTACACCGTTATGCACAGACCACACAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTAATGCAAGCGCCATTAACAAGAAAATGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCTCCGGCAGGGTCATGTCCCGGCAGGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTGTGACGAGTTCGTCGTCTTTTTTTTCGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGGGAACCTGGCTAAAGTGTCTGAAGGCTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTTCTGCGGCCAGCGCGGCCAGCGCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_011149|1|1|2988166-2989231|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGGATGGCTCATATCCGGTTTCTGTTTCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATTGATACTGTTCTCAAGCGCCGTTTTAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCGCCAGAAATATTCATGATCATCGGGATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATATTCCAGAAAATGCCTGGGTGATGATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTATCTCCTGTCGACCTTGCCGTTAAAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATAACTGGCGGGTTTTAGTGTCGTTATAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCAGGCTTGACGACAGTCTCCAGCCACTCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACCGCGCGGGCTATCGTTCAGGACTATTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGAAGATATTGAAAGCGCCCAATCTTCCCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCTGTTACACCGTTATGCACAGACCACACAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTAATGCAAGCGCCATTAACAAGAAAATGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCTCCGGCAGGGTCATGTCCCGGCAGGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTGTGACGAGTTCGTCGTCTTTTTTTTCGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGGGAACCTGGCTAAAGTGTCTGAAGGCTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTTCTGCGGCCAGCGCGGCCAGCGCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011149.1\|WP_000029743.1\|2995114_2997778_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_011149.1\|WP_001518648.1\|2989327_2989621_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NC_011149.1\|WP_001173663.1\|2983843_2984449_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NC_011149.1\|WP_000741640.1\|2982238_2982949_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NC_011149.1\|WP_000029567.1\|2992998_2993547_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NC_011149.1\|WP_001092269.1\|2984435_2985875_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NC_011149.1\|WP_000134246.1\|2980713_2981763_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NC_011149.1\|WP_000206423.1\|2991926_2992985_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NC_011149.1\|WP_000490481.1\|2987043_2988090_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NC_011149.1\|WP_000144834.1\|2989620_2990541_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_011149.1\|WP_001219244.1\|2981759_2982239_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NC_011149.1\|WP_000281478.1\|2990537_2991188_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NC_011149.1\|WP_000368578.1\|2993543_2995103_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NC_011149.1\|WP_000372384.1\|2985884_2986793_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NC_011149.1\|WP_000517480.1\|2982967_2983279_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NC_011149.1\|WP_000085109.1\|2991169_2991916_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NC_011149.1\|WP_001290673.1\|3000225_3001938_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NC_011149.1\|WP_000039831.1\|2999389_3000124_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NC_011149.1\|WP_001221538.1\|2979971_2980733_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NC_011149.1\|WP_001537530.1\|2983469_2983793_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891

Protein	Function_ID	Function_description	E-value
NC_011149.1\|WP_000029743.1\|2995114_2997778_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NC_011149.1\|WP_001518648.1\|2989327_2989621_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NC_011149.1\|WP_001173663.1\|2983843_2984449_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NC_011149.1\|WP_000741640.1\|2982238_2982949_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	5.57732e-118
NC_011149.1\|WP_000029567.1\|2992998_2993547_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.69566e-31
NC_011149.1\|WP_001092269.1\|2984435_2985875_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NC_011149.1\|WP_000134246.1\|2980713_2981763_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NC_011149.1\|WP_000206423.1\|2991926_2992985_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.89551e-135
NC_011149.1\|WP_000490481.1\|2987043_2988090_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NC_011149.1\|WP_000144834.1\|2989620_2990541_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.37013e-157
NC_011149.1\|WP_001219244.1\|2981759_2982239_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NC_011149.1\|WP_000281478.1\|2990537_2991188_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	5.84644e-75
NC_011149.1\|WP_000368578.1\|2993543_2995103_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.7397e-172
NC_011149.1\|WP_000372384.1\|2985884_2986793_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NC_011149.1\|WP_000517480.1\|2982967_2983279_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NC_011149.1\|WP_000085109.1\|2991169_2991916_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.75099e-48
NC_011149.1\|WP_001290673.1\|3000225_3001938_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NC_011149.1\|WP_000039831.1\|2999389_3000124_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.80681e-138
NC_011149.1\|WP_001221538.1\|2979971_2980733_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NC_011149.1\|WP_001537530.1\|2983469_2983793_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48

>NC_011149.1|WP_000490481.1|2987043_2988090_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NC_011149.1|WP_000372384.1|2985884_2986793_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NC_011149.1|WP_001092269.1|2984435_2985875_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NC_011149.1|WP_001173663.1|2983843_2984449_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NC_011149.1|WP_001537530.1|2983469_2983793_-|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NC_011149.1|WP_000517480.1|2982967_2983279_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NC_011149.1|WP_000741640.1|2982238_2982949_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISLGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NC_011149.1|WP_001219244.1|2981759_2982239_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NC_011149.1|WP_000134246.1|2980713_2981763_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NC_011149.1|WP_001221538.1|2979971_2980733_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NC_011149.1|WP_001518648.1|2989327_2989621_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NC_011149.1|WP_000144834.1|2989620_2990541_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPASDMLPPAIPEPESLGDSGHRGHG
>NC_011149.1|WP_000281478.1|2990537_2991188_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPMLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIRREKSRQMIQFSSVDYTGVLVLNDPVLFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>NC_011149.1|WP_000085109.1|2991169_2991916_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NC_011149.1|WP_000206423.1|2991926_2992985_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILVESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEAVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NC_011149.1|WP_000029567.1|2992998_2993547_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVTKDDKATLLQWHEELQEKRELRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAAWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NC_011149.1|WP_000368578.1|2993543_2995103_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NC_011149.1|WP_000029743.1|2995114_2997778_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDRYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKEAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDIYWQQALTKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQKGKFYCDRAFARQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKGEFERLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NC_011149.1|WP_000039831.1|2999389_3000124_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNDLPKVDRVLALAEPNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NC_011149.1|WP_001290673.1|3000225_3001938_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIVEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIESGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE

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Crispr_ID: NC_011149_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011149_2

3005517-3006033

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

8 spacers

cas3,cas8e,cse2gr11,cas7,cas5

The CRISPR arrays of NC_011149_2

>merge|NC_011149|2|3005517-3006033|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACCTGCTCAGCGATAACCGGCAGGTTTAGCCGCTCGGTTTATCCCCGCTGACGCGGGGAACACTTGCCGACCAGATCAATGACAACGCTAACCTTCGGTTTATCCCCGCTGGCGCGGGGAACACCAGATCACAACGGGTGACGTGATTTTTGGAAACGGTTTATCCCCGCTGGCGCGGGGAACACTCGTTTTTATCTGCATCTCACTCCCCCTTAACCGGTTTATCCCCGCTGGCGCGGGGAACACGCCTAAGCCGGGATTTGCTTTAGGCCAGTTGGCGGTTTATCCCCGCTGGCGCGGGGAACACAATAAATGGGATGATCCTGTTGTCCGGGATGCCGGTTTATCCCCGCTGGCGCGGGGAACACTCCATCGCTTTTGCCAATCTATCAGACAATTTCGGTTTATCCCCGCTGGCGCGGGGAACACGGCGACTAACGGCGTGCTGACCAGCCAGTCGCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_011149|2|2|3005517-3006033|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	CTGCTCAGCGATAACCGGCAGGTTTAGCCGCT
CGGTTTATCCCCGCTGACGCGGGGAACAC	TTGCCGACCAGATCAATGACAACGCTAACCTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGATCACAACGGGTGACGTGATTTTTGGAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGTTTTTATCTGCATCTCACTCCCCCTTAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTAAGCCGGGATTTGCTTTAGGCCAGTTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATAAATGGGATGATCCTGTTGTCCGGGATGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCATCGCTTTTGCCAATCTATCAGACAATTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCGACTAACGGCGTGCTGACCAGCCAGTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_011149|2|2|3005517-3006033|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	CTGCTCAGCGATAACCGGCAGGTTTAGCCGCT
CGGTTTATCCCCGCTGACGCGGGGAACAC	TTGCCGACCAGATCAATGACAACGCTAACCTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGATCACAACGGGTGACGTGATTTTTGGAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGTTTTTATCTGCATCTCACTCCCCCTTAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTAAGCCGGGATTTGCTTTAGGCCAGTTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATAAATGGGATGATCCTGTTGTCCGGGATGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCATCGCTTTTGCCAATCTATCAGACAATTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCGACTAACGGCGTGCTGACCAGCCAGTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_011149|2|2|3005578-3006033|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	TTGCCGACCAGATCAATGACAACGCTAACCTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGATCACAACGGGTGACGTGATTTTTGGAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGTTTTTATCTGCATCTCACTCCCCCTTAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTAAGCCGGGATTTGCTTTAGGCCAGTTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATAAATGGGATGATCCTGTTGTCCGGGATGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCATCGCTTTTGCCAATCTATCAGACAATTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCGACTAACGGCGTGCTGACCAGCCAGTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011149.1\|WP_000981787.1\|3012457_3015157_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NC_011149.1\|WP_001079647.1\|3016950_3017487_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NC_011149.1\|WP_000368578.1\|2993543_2995103_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NC_011149.1\|WP_000029743.1\|2995114_2997778_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_011149.1\|WP_000029567.1\|2992998_2993547_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NC_011149.1\|WP_001199961.1\|3006329_3007001_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NC_011149.1\|WP_001044459.1\|3015169_3015943_+\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NC_011149.1\|WP_001290673.1\|3000225_3001938_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NC_011149.1\|WP_000206423.1\|2991926_2992985_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NC_011149.1\|WP_000842512.1\|3011790_3012378_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NC_011149.1\|WP_000108313.1\|3004171_3004534_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NC_011149.1\|WP_001207997.1\|3004621_3005419_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NC_011149.1\|WP_000832396.1\|3016483_3016954_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NC_011149.1\|WP_000210861.1\|3008517_3010155_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NC_011149.1\|WP_000178262.1\|3015962_3016469_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NC_011149.1\|WP_000085109.1\|2991169_2991916_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NC_011149.1\|WP_000036734.1\|3007136_3008435_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NC_011149.1\|WP_000039831.1\|2999389_3000124_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NC_011149.1\|WP_000210913.1\|3001937_3003737_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NC_011149.1\|WP_000210454.1\|3010382_3011183_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569

Protein	Function_ID	Function_description	E-value
NC_011149.1\|WP_000981787.1\|3012457_3015157_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NC_011149.1\|WP_001079647.1\|3016950_3017487_+\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	5.10839e-121
NC_011149.1\|WP_000368578.1\|2993543_2995103_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.7397e-172
NC_011149.1\|WP_000029743.1\|2995114_2997778_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NC_011149.1\|WP_000029567.1\|2992998_2993547_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.69566e-31
NC_011149.1\|WP_001199961.1\|3006329_3007001_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NC_011149.1\|WP_001044459.1\|3015169_3015943_+\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NC_011149.1\|WP_001290673.1\|3000225_3001938_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NC_011149.1\|WP_000206423.1\|2991926_2992985_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.89551e-135
NC_011149.1\|WP_000842512.1\|3011790_3012378_+\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
NC_011149.1\|WP_000108313.1\|3004171_3004534_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NC_011149.1\|WP_001207997.1\|3004621_3005419_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	7.9973e-103
NC_011149.1\|WP_000832396.1\|3016483_3016954_+\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
NC_011149.1\|WP_000210861.1\|3008517_3010155_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NC_011149.1\|WP_000178262.1\|3015962_3016469_+\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	2.0961e-105
NC_011149.1\|WP_000085109.1\|2991169_2991916_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.75099e-48
NC_011149.1\|WP_000036734.1\|3007136_3008435_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NC_011149.1\|WP_000039831.1\|2999389_3000124_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.80681e-138
NC_011149.1\|WP_000210913.1\|3001937_3003737_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NC_011149.1\|WP_000210454.1\|3010382_3011183_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.36327e-159

>NC_011149.1|WP_001207997.1|3004621_3005419_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NC_011149.1|WP_000108313.1|3004171_3004534_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NC_011149.1|WP_000210913.1|3001937_3003737_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYATTTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPEAPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NC_011149.1|WP_001290673.1|3000225_3001938_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIVEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIESGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NC_011149.1|WP_000039831.1|2999389_3000124_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNDLPKVDRVLALAEPNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NC_011149.1|WP_000029743.1|2995114_2997778_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDRYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKEAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDIYWQQALTKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQKGKFYCDRAFARQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKGEFERLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NC_011149.1|WP_000368578.1|2993543_2995103_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NC_011149.1|WP_000029567.1|2992998_2993547_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVTKDDKATLLQWHEELQEKRELRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAAWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NC_011149.1|WP_000206423.1|2991926_2992985_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILVESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEAVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NC_011149.1|WP_000085109.1|2991169_2991916_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NC_011149.1|WP_001199961.1|3006329_3007001_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NC_011149.1|WP_000036734.1|3007136_3008435_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NC_011149.1|WP_000210861.1|3008517_3010155_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NC_011149.1|WP_000210454.1|3010382_3011183_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NC_011149.1|WP_000842512.1|3011790_3012378_+|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NC_011149.1|WP_000981787.1|3012457_3015157_+|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWIIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESSYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLMADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NC_011149.1|WP_001044459.1|3015169_3015943_+|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NC_011149.1|WP_000178262.1|3015962_3016469_+|fimbrial-protein
MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDVSQTKPVGYSLNCDGRASDYLKLQIQGSTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NC_011149.1|WP_000832396.1|3016483_3016954_+|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NC_011149.1|WP_001079647.1|3016950_3017487_+|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINVTVGTAFVLKEGITTINLQAWLQKYAGEDVMPGEFSGSATVSFEYQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_011149_1	1.2\|2988195\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988195-2988226	32	NZ_CP022304	Thalassococcus sp. S3 plasmid pS3A, complete sequence	1984-2015	5	0.844
NC_011149_2	2.8\|3005973\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	3005973-3006004	32	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	650526-650557	5	0.844
NC_011149_2	2.8\|3005973\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	3005973-3006004	32	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	103001-103032	5	0.844
NC_011149_1	1.2\|2988195\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988195-2988226	32	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	328890-328921	6	0.812
NC_011149_1	1.5\|2988378\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988378-2988409	32	NZ_KY296095	Pseudomonas aeruginosa strain 14057 plasmid p14057-KPC, complete sequence	32689-32720	6	0.812
NC_011149_1	1.5\|2988378\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988378-2988409	32	NZ_CP024631	Pseudomonas aeruginosa strain PA59 plasmid unnamed1, complete sequence	7133-7164	6	0.812
NC_011149_1	1.5\|2988378\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988378-2988409	32	NZ_MH734334	Pseudomonas aeruginosa strain 1011 plasmid p1011-KPC2, complete sequence	45685-45716	6	0.812
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP010862	Marinovum algicola DG 898 plasmid pMaD7	30879-30910	6	0.812
NC_011149_2	2.5\|3005790\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	3005790-3005821	32	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	1434-1465	6	0.812
NC_011149_1	1.5\|2988378\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988378-2988409	32	NZ_CP020561	Pseudomonas aeruginosa strain CR1 plasmid pCR1, complete sequence	30704-30735	7	0.781
NC_011149_1	1.5\|2988378\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988378-2988409	32	NZ_MN433456	Pseudomonas aeruginosa strain PAB546 plasmid unnamed, complete sequence	30247-30278	7	0.781
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP010149	Escherichia coli strain D6 plasmid A, complete sequence	119865-119896	7	0.781
NC_011149_1	1.14\|2988927\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988927-2988958	32	NC_049840	Klebsiella phage vB_KpnS_FZ10, complete genome	30831-30862	7	0.781
NC_011149_1	1.16\|2989049\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989049-2989080	32	MH648945	Microviridae sp. isolate ctdb011, complete genome	2602-2633	7	0.781
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP015735	Arthrobacter sp. U41 plasmid unnamed3, complete sequence	41279-41310	7	0.781
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP054606	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence	70392-70423	7	0.781
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP026306	Streptomyces lunaelactis strain MM109 plasmid pSLUN2, complete sequence	14591-14622	7	0.781
NC_011149_2	2.8\|3005973\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	3005973-3006004	32	NZ_CP015601	Pseudomonas antarctica strain PAMC 27494 plasmid pP27494_1, complete sequence	60217-60248	7	0.781
NC_011149_1	1.3\|2988256\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988256-2988287	32	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10088	8	0.75
NC_011149_1	1.5\|2988378\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988378-2988409	32	NC_021709	Alteromonas mediterranea 615 plasmid unnamed, complete sequence	120479-120510	8	0.75
NC_011149_1	1.6\|2988439\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988439-2988470	32	KM389216	UNVERIFIED: Pseudomonas phage F_ET605sp/Pa1651 clone contig00001 genomic sequence	149-180	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP026494	Escherichia coli strain HS13-1 plasmid pHS13-1-IncF, complete sequence	45712-45743	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_KU664810	Escherichia coli strain 11.3-R3 plasmid pCERC5, complete sequence	19112-19143	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_KY007017	Escherichia coli strain 14.3-R4 plasmid pCERC9, complete sequence	19112-19143	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	KR827684	Escherichia coli plasmid pCERC3, complete sequence	20389-20420	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_KP119165	Escherichia coli strain QT598 plasmid pEC598, complete sequence	53830-53861	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_KP398867	Escherichia coli strain DB04277 plasmid pDB4277, complete sequence	1977-2008	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP010147	Escherichia coli strain D5 plasmid B, complete genome	75306-75337	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP010232	Escherichia coli strain S30 plasmid A, complete sequence	129129-129160	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_AP017611	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence	27733-27764	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP010158	Escherichia coli strain D10 plasmid A, complete genome	106719-106750	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP043952	Escherichia coli strain ST95-32 plasmid pST95-32-2, complete sequence	19687-19718	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP010141	Escherichia coli strain D3 plasmid A, complete sequence	58013-58044	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP049349	Escherichia coli strain 3R plasmid p3R-1, complete sequence	103085-103116	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP038182	Escherichia coli strain 2 HS-C plasmid p2HS-C-2, complete sequence	85648-85679	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP021087	Escherichia coli strain 13P460A plasmid p13P460A-2, complete sequence	34094-34125	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP053732	Escherichia coli strain CP55_Sichuan plasmid pCP55-IncFIB, complete sequence	25280-25311	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP020546	Escherichia coli strain ZJ3920 plasmid pZJ3920-1, complete sequence	46254-46285	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	CP043737	Escherichia coli strain CVM N17EC0616 plasmid pN17EC0616-1, complete sequence	95838-95869	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP010316	Escherichia coli strain 789 plasmid pAPEC-O78-ColV	5578-5609	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_LS992167	Escherichia coli isolate Escherichia coli str. TO6 plasmid 2, complete sequence	69050-69081	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP019282	Escherichia coli strain 13P484A plasmid p13P484A-2, complete sequence	55622-55653	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP034739	Escherichia coli strain L65 plasmid pL65-2, complete sequence	53704-53735	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP054369	Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence	52102-52133	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP048296	Escherichia coli strain CVM N18EC0432 plasmid pN18EC0432-2, complete sequence	108396-108427	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP019251	Escherichia coli strain 13KWH46 plasmid p13KWH46-1, complete sequence	62190-62221	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP021728	Escherichia coli strain Combat11I9 plasmid pCombat11I9-2, complete sequence	72213-72244	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP005931	Escherichia coli APEC IMT5155 plasmid p1ColV5155, complete sequence	49145-49176	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP026854	Escherichia coli strain MS7163 plasmid pMS7163A, complete sequence	85073-85104	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP019247	Escherichia coli strain Combat13F7 plasmid pCombat13F7-2, complete sequence	55432-55463	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP019268	Escherichia coli strain 13C1079T plasmid p13C1079T-1, complete sequence	53419-53450	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP029243	Escherichia coli strain ECCRA-119 plasmid pTB201, complete sequence	114657-114688	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	CM019851	Escherichia coli strain CVM N17EC0326 plasmid pN17EC0326-1, complete sequence, whole genome shotgun sequence	36307-36338	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP049355	Escherichia coli strain T28R plasmid pT28R-2, complete sequence	29837-29868	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP033091	Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 plasmid unnamed, complete sequence	34235-34266	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	LT906556	Escherichia coli isolate E. coli RL465 genome assembly, plasmid: I	25840-25871	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP032263	Escherichia coli strain AR_0089 plasmid unnamed1, complete sequence	106356-106387	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP027357	Escherichia coli strain 2013C-4991 plasmid unnamed2	38926-38957	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP019018	Escherichia coli strain Ecol_244 plasmid pEC244_2, complete sequence	37732-37763	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP019007	Escherichia coli strain Ecol_AZ159 plasmid pECAZ159_1, complete sequence	83389-83420	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP011916	Escherichia coli strain PSUO2 plasmid pPSUO2, complete sequence	68772-68803	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP019456	Escherichia coli strain FHI_NMBU_03 plasmid pFHI_NMBU_03_1, complete sequence	60414-60445	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP018994	Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_1, complete sequence	137844-137875	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP047878	Escherichia coli strain LD22-1 plasmid pLD22-1-135kb, complete sequence	34230-34261	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP046718	Escherichia coli strain T16R plasmid pT16R-2, complete sequence	32415-32446	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP041303	Escherichia coli strain MSHS 133 plasmid pCys-11, complete sequence	80412-80443	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_011964	Escherichia coli plasmid pAPEC-O103-ColBM, complete sequence	45154-45185	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP012636	Escherichia coli strain SF-088 plasmid pSF-088-1, complete sequence	58114-58145	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP022731	Escherichia coli strain SA186 plasmid pSA186_2, complete sequence	78297-78328	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP022732	Escherichia coli strain SA186 plasmid pSA186_3, complete sequence	51203-51234	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_LT985319	Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_pII	91235-91266	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_AP019676	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-1, complete sequence	34308-34339	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_024956	Escherichia coli strain K-12 plasmid pDM0133, complete sequence	11814-11845	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_025179	Escherichia coli plasmid pC59-153, complete sequence	17858-17889	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	CP042897	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_01, complete sequence	69295-69326	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP051689	Escherichia coli strain SCU-387 plasmid pSCU-387-1, complete sequence	40514-40545	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP012377	Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence	25755-25786	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	KU932025	Escherichia coli plasmid pEC14I, complete sequence	59794-59825	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_025175	Escherichia coli plasmid pH2332-166, complete sequence	108111-108142	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_025139	Escherichia coli plasmid pH2291-144, complete sequence	55380-55411	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_LS992172	Escherichia coli isolate Escherichia coli str. TO73 plasmid 2, complete sequence	23770-23801	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP041301	Escherichia coli strain MSHS 472 plasmid pCys-6, complete sequence	64366-64397	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	CP054455	Escherichia coli strain SCU-487 plasmid pSCU-487-1, complete sequence	34211-34242	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP022166	Escherichia coli strain M160133 plasmid pM160133_p2, complete sequence	48665-48696	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP047577	Escherichia coli strain 94EC plasmid p94EC-1, complete sequence	135008-135039	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	KU578032	Escherichia coli plasmid pCERC4, complete sequence	19112-19143	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP026643	Escherichia coli strain FORC_082 plasmid pFORC82_2, complete sequence	36525-36556	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP042586	Escherichia coli strain LD91-1 plasmid pLD91-1-146kb, complete sequence	34230-34261	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP023363	Escherichia coli strain 144 plasmid 134q, complete sequence	1586-1617	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP023367	Escherichia coli strain 1428 plasmid p111, complete sequence	31774-31805	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP023384	Escherichia coli strain 1223 plasmid p147, complete sequence	40259-40290	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_010409	Escherichia coli plasmid pVM01, complete sequence	51610-51641	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	CP043743	Escherichia coli strain CVM N17EC0211 plasmid pN17EC0211, complete sequence	92667-92698	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	MN419430	Escherichia coli strain 2016-4017437 plasmid p17437, complete sequence	144746-144777	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP020934	Escherichia coli strain HB-Coli0 plasmid unnamed1, complete sequence	14793-14824	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_LR025097	Escherichia coli isolate EC-7215 plasmid 2, complete sequence	96783-96814	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_011980	Escherichia coli chi7122 plasmid pAPEC-1, complete sequence	9908-9939	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP030791	Escherichia coli strain APEC O2-211 plasmid pAPEC-O2-211A-ColV, complete sequence	39860-39891	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP053282	Escherichia coli strain SCU-308 plasmid pSCU-308-1, complete sequence	38678-38709	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_020271	Escherichia coli O25b:H4-ST131 str. EC958 strain ST131 plasmid pJIE186-2, complete sequence	105768-105799	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	MN848327	Escherichia coli strain T16RC plasmid pT16RC-1, complete sequence	59961-59992	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	MN823988	Escherichia coli strain 14406 plasmid p14406-FII, complete sequence	58080-58111	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_LR740777	Escherichia coli strain BEN2908 isolate 1 day old chicken plasmid pAPEC2908	41984-42015	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP047667	Escherichia coli strain LD26-1 plasmid pLD26-1-135kb, complete sequence	98510-98541	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP041299	Escherichia coli O1:H42 strain CLSC36 plasmid pCys-1, complete sequence	104166-104197	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP031107	Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence	145376-145407	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_LR740759	Escherichia coli strain BEN5202 isolate laying hen 51 weeks old plasmid paAPEC5202	60668-60699	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP012113	Escherichia coli strain PSUO78 plasmid pPSUO78_1, complete sequence	129984-130015	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP019055	Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence	55977-56008	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP048026	Escherichia coli strain GZEC065 plasmid pTEM1-GZEC065, complete sequence	67157-67188	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP029744	Escherichia coli strain AR_0085 plasmid unnamed3, complete sequence	75175-75206	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	LC484363	Escherichia coli C1 plasmid pColV-C1 DNA, complete sequence	66361-66392	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP041920	Escherichia coli strain Ec40743 plasmid unnamed1, complete sequence	16487-16518	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP051224	Escherichia coli strain SCZE5 plasmid pSCZE2	29840-29871	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_007675	Escherichia coli A2363 plasmid pAPEC-O2-ColV, complete sequence	148977-149008	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_018954	Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A, complete sequence	126559-126590	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_018966	Salmonella enterica subsp. enterica serovar Kentucky plasmid pSSAP03302A, complete sequence	125750-125781	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP014489	Escherichia coli strain G749 plasmid pG749_1, complete sequence	107995-108026	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	CP027485	Escherichia coli strain 2013C-4390 plasmid unnamed, complete sequence	110445-110476	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP024140	Escherichia coli strain 14EC020 plasmid p14EC020b, complete sequence	11159-11190	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_011747	Escherichia coli S88 plasmid pECOS88, complete sequence	101722-101753	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP049102	Escherichia coli strain EC28 plasmid p2, complete sequence	35498-35529	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_017659	Escherichia coli O83:H1 str. NRG 857C plasmid pO83_CORR, complete sequence	9906-9937	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP026940	Escherichia coli strain CFS3313 plasmid pCFS3313-1, complete sequence	34235-34266	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP042245	Escherichia coli strain PU-1 plasmid pColV-PU1, complete sequence	188994-189025	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP025403	Escherichia coli strain MS8345 plasmid pMS8345B, complete sequence	100796-100827	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_LT985293	Escherichia coli strain 4410-1 plasmid RCS79_p, complete sequence	150676-150707	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	MN807689	Escherichia coli strain A241 plasmid pA241-TEM, complete sequence	20393-20424	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MK430046	Escherichia coli strain 11.4-R4 plasmid pCERC13, complete sequence	80391-80422	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MK461929	Escherichia coli strain 2009_36 plasmid p2009_36_F, complete sequence	34265-34296	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MK416151	Escherichia coli strain 6TC9eCTX plasmid pHNTC9e, complete sequence	27242-27273	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MK461928	Escherichia coli strain F2_14D plasmid pF2_14D_F, complete sequence	34264-34295	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MK878891	Escherichia coli strain J53 plasmid pMG336, complete sequence	100856-100887	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MK878890	Escherichia coli strain J53 plasmid pMG337, complete sequence	101317-101348	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MN053930	Escherichia coli strain 2.3-R4 plasmid pCERC14, complete sequence	19116-19147	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MH422552	Escherichia coli strain L-I1 plasmid pIncFIB, complete sequence	78590-78621	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MH580302	Escherichia coli strain 1107 plasmid p1107-118K, complete sequence	22383-22414	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP006635	Escherichia coli PCN033 plasmid p3PCN033, complete sequence	118672-118703	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MG014722	Escherichia coli strain P2-3 plasmid pP2-3T, complete sequence	210116-210147	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MF474175	Escherichia coli strain J53/pNIT-HK plasmid pNIT-HK, complete sequence	95457-95488	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MG825372	Escherichia coli strain 1106 plasmid p1106-IncFIB, complete sequence	40752-40783	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	125785-125816	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MG825378	Escherichia coli strain 1108 plasmid p1108-IncFIB, complete sequence	140007-140038	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MF174860	Escherichia coli strain 6/14/6b plasmid pIncF-MU4, complete sequence	41127-41158	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MG385063	Escherichia coli strain WF5-29 plasmid pWF5-29, complete sequence	165380-165411	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MG838205	Escherichia coli strain 92944 plasmid p92944-mph, complete sequence	47335-47366	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_MH195200	Escherichia coli strain 2009-52 plasmid pSDJ2009-52F, complete sequence	72068-72099	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NZ_CP025329	Escherichia coli strain ExPEC XM plasmid unnamed	19689-19720	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_023327	Escherichia coli ACN001 plasmid pACN001-B, complete sequence	19689-19720	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	CP043741	Escherichia coli strain CVM N17EC0320 plasmid pN17EC0320-2, complete sequence	36685-36716	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	MN816372	Escherichia coli strain A130 plasmid pA130-TEM, complete sequence	16506-16537	8	0.75
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_009837	Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence	115461-115492	8	0.75
NC_011149_1	1.15\|2988988\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988988-2989019	32	NZ_CP014519	Sinomonas atrocyanea strain KCTC 3377 plasmid pSA01, complete sequence	57391-57422	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP054600	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed1, complete sequence	53653-53684	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	460336-460367	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP034811	Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence	50992-51023	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1813420-1813451	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1048637-1048668	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	794269-794300	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1552096-1552127	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1552040-1552071	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1039651-1039682	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1524990-1525021	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	765122-765153	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	2130760-2130791	8	0.75
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP014598	Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence	222470-222501	8	0.75
NC_011149_2	2.7\|3005912\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	3005912-3005943	32	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	1011717-1011748	8	0.75
NC_011149_2	2.8\|3005973\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	3005973-3006004	32	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	277296-277327	8	0.75
NC_011149_2	2.8\|3005973\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	3005973-3006004	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	46000-46031	8	0.75
NC_011149_2	2.8\|3005973\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	3005973-3006004	32	NZ_CP040096	Pantoea sp. SO10 plasmid unnamed1, complete sequence	261535-261566	8	0.75
NC_011149_1	1.2\|2988195\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988195-2988226	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1929932-1929963	9	0.719
NC_011149_1	1.2\|2988195\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988195-2988226	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1709399-1709430	9	0.719
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	KY554763	Lactococcus phage LW32, complete genome	38158-38189	9	0.719
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_049806	Lactococcus phage LW31, complete genome	38548-38579	9	0.719
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	MN855809	Siphoviridae sp. isolate 134, complete genome	8191-8222	9	0.719
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	KY554765	Lactococcus phage LW4, complete genome	37656-37687	9	0.719
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	MN528768	Lactococcus phage P596, complete genome	36709-36740	9	0.719
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	KY554764	Lactococcus phage LW33, complete genome	37895-37926	9	0.719
NC_011149_1	1.7\|2988500\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988500-2988531	32	NC_049805	Lactococcus phage phiQ1 DNA, complete genome	24911-24942	9	0.719
NC_011149_1	1.10\|2988683\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988683-2988714	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	521498-521529	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	116126-116157	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_LR134468	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 26, complete sequence	82277-82308	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP020695	Sulfitobacter sp. D7 plasmid p1SUD7, complete sequence	187380-187411	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_AP014708	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_4p, complete sequence	25122-25153	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_014642	Achromobacter xylosoxidans A8 plasmid pA82, complete sequence	193278-193309	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1232490-1232521	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP009293	Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence	55458-55489	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1279517-1279548	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP015094	Pelagibaca abyssi strain JLT2014 plasmid pPABY6, complete sequence	59738-59769	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	548491-548522	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	441722-441753	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1347065-1347096	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	439267-439298	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1244367-1244398	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	928884-928915	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1106274-1106305	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1228060-1228091	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	145902-145933	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	459973-460004	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1410809-1410840	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1183810-1183841	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1279524-1279555	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	73331-73362	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP041164	Leisingera aquaemixtae strain R2C4 plasmid unnamed3, complete sequence	91711-91742	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	1250543-1250574	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1552390-1552421	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1349188-1349219	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	424561-424592	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	362040-362071	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	571532-571563	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1552525-1552556	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1303497-1303528	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	203751-203782	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	99086-99117	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP032156	Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence	155714-155745	9	0.719
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	664312-664343	9	0.719
NC_011149_2	2.8\|3005973\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	3005973-3006004	32	MT723940	Mycobacterium phage Ellie, complete genome	6519-6550	9	0.719
NC_011149_2	2.8\|3005973\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	3005973-3006004	32	MF324915	Mycobacterium phage Amgine, complete genome	6448-6479	9	0.719
NC_011149_1	1.11\|2988744\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988744-2988775	32	NC_005838	Thermus thermophilus HB27 plasmid pTT27, complete sequence	215212-215243	10	0.688
NC_011149_1	1.11\|2988744\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988744-2988775	32	NZ_AP019802	Thermus thermophilus strain HC11 plasmid pHC11, complete sequence	142572-142603	10	0.688
NC_011149_1	1.11\|2988744\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988744-2988775	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	201272-201303	10	0.688
NC_011149_1	1.11\|2988744\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2988744-2988775	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	11056-11087	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	463181-463212	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP020385	Rhodovulum sp. MB263 plasmid pRSMBA, complete sequence	146581-146612	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1669210-1669241	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	422810-422841	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	429000-429031	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	2110357-2110388	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP013512	Rhizobium sp. N1314 plasmid pRspN1314a, complete sequence	86221-86252	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1039213-1039244	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	543640-543671	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	52147-52178	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	108958-108989	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1399078-1399109	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP046332	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2	225857-225888	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	56115-56146	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	232703-232734	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1410571-1410602	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	980601-980632	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	888206-888237	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	49903-49934	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	352968-352999	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	658064-658095	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_006466	Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence	196887-196918	10	0.688
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	711388-711419	10	0.688
NC_011149_1	1.1\|2988134\|32\|NC_011149\|CRISPRCasFinder,CRT	2988134-2988165	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	47822-47853	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	161376-161407	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP020695	Sulfitobacter sp. D7 plasmid p1SUD7, complete sequence	24889-24920	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	161390-161421	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	161388-161419	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	161386-161417	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	167478-167509	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	182077-182108	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	197463-197494	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1088479-1088510	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	314958-314989	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP015420	Rhodovulum sulfidophilum DSM 1374 plasmid unnamed2, complete sequence	67888-67919	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	162442-162473	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1498108-1498139	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP035514	Haematobacter massiliensis strain OT1 plasmid pOT1-4, complete sequence	81805-81836	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_AP014801	Rhodovulum sulfidophilum plasmid Plasmid1 DNA, complete genome, strain: DSM 2351	18252-18283	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	182077-182108	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	171343-171374	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	171344-171375	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	182086-182117	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	182104-182135	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	182076-182107	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1301780-1301811	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	799059-799090	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	125209-125240	11	0.656
NC_011149_1	1.18\|2989171\|32\|NC_011149\|CRISPRCasFinder,CRT,PILER-CR	2989171-2989202	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1378631-1378662	11	0.656

1. spacer 1.2|2988195|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022304 (Thalassococcus sp. S3 plasmid pS3A, complete sequence) position: , mismatch: 5, identity: 0.844

atggat-ggctcatatccggtttctgtttctgc	CRISPR spacer
-tggatcagctcatagccggtttctgtctcttc	Protospacer
 ***** .******* ***********.*** *

2. spacer 2.8|3005973|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

-ggcgactaacggcgtgctgaccagccagtcgc	CRISPR spacer
cggcggct-gcggcgtgctgaccggccagacgc	Protospacer
 ****.** .*************.***** ***

3. spacer 2.8|3005973|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 5, identity: 0.844

-ggcgactaacggcgtgctgaccagccagtcgc	CRISPR spacer
cggcggct-gcggcgtgctgaccggccagacgc	Protospacer
 ****.** .*************.***** ***

4. spacer 1.2|2988195|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 6, identity: 0.812

atggatggctcatatccggtttctgtttctgc	CRISPR spacer
agggatgcctcatatccggtttctgttcgtca	Protospacer
* ***** *******************. *

5. spacer 1.5|2988378|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY296095 (Pseudomonas aeruginosa strain 14057 plasmid p14057-KPC, complete sequence) position: , mismatch: 6, identity: 0.812

atattgatactgttctcaagcgccgttttagc	CRISPR spacer
atattgatgctgttctccagcgcccgatcagc	Protospacer
********.******** ******   *.***

6. spacer 1.5|2988378|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024631 (Pseudomonas aeruginosa strain PA59 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

atattgatactgttctcaagcgccgttttagc	CRISPR spacer
atattgatgctgttctccagcgcccgatcagc	Protospacer
********.******** ******   *.***

7. spacer 1.5|2988378|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH734334 (Pseudomonas aeruginosa strain 1011 plasmid p1011-KPC2, complete sequence) position: , mismatch: 6, identity: 0.812

atattgatactgttctcaagcgccgttttagc	CRISPR spacer
atattgatgctgttctccagcgcccgatcagc	Protospacer
********.******** ******   *.***

8. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010862 (Marinovum algicola DG 898 plasmid pMaD7) position: , mismatch: 6, identity: 0.812

----aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcgaaa----ccggcggccagcgcggccagcgcctc	Protospacer
    **    .* ***********************

9. spacer 2.5|3005790|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 6, identity: 0.812

gcctaagccgggatttgctttaggccagttgg	CRISPR spacer
acccagaccgggatttgctttcggccagtttg	Protospacer
.**.*..************** ******** *

10. spacer 1.5|2988378|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020561 (Pseudomonas aeruginosa strain CR1 plasmid pCR1, complete sequence) position: , mismatch: 7, identity: 0.781

atattgatactgttctcaagcgccgttttagc	CRISPR spacer
atattgatgctgttctccagcgcccgatccgc	Protospacer
********.******** ******   *. **

11. spacer 1.5|2988378|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN433456 (Pseudomonas aeruginosa strain PAB546 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

atattgatactgttctcaagcgccgttttagc	CRISPR spacer
atattgatgctgttctccagcgcccgatccgc	Protospacer
********.******** ******   *. **

12. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010149 (Escherichia coli strain D6 plasmid A, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacactggcagaaaacgcctgggtgatggtc	Protospacer
 * *.*.*  *******.************.**

13. spacer 1.14|2988927|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_049840 (Klebsiella phage vB_KpnS_FZ10, complete genome) position: , mismatch: 7, identity: 0.781

gttaatgcaagcgccattaacaagaaaatgac	CRISPR spacer
gctcctgacagcgccattaacaagaacatcac	Protospacer
*.*  **  ***************** ** **

14. spacer 1.16|2989049|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MH648945 (Microviridae sp. isolate ctdb011, complete genome) position: , mismatch: 7, identity: 0.781

gttgtgacgagttcgtcgtcttttttttcgct	CRISPR spacer
atttcgacgagttcgtcgtagtttttttcgtc	Protospacer
.** .**************  *********..

15. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015735 (Arthrobacter sp. U41 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ttgatctccgcggccagcgcggccagcacctc	Protospacer
    *.**.******************.****

16. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054606 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence) position: , mismatch: 7, identity: 0.781

----aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcgaaa----ccggcggccagcgcggccagcgcttc	Protospacer
    **    .* ********************.**

17. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026306 (Streptomyces lunaelactis strain MM109 plasmid pSLUN2, complete sequence) position: , mismatch: 7, identity: 0.781

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
aatttttctgcggctagagcggccccaacccc	Protospacer
**************.** ******   .**.*

18. spacer 2.8|3005973|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015601 (Pseudomonas antarctica strain PAMC 27494 plasmid pP27494_1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcgactaacggcgtgctgaccagccagtcgc	CRISPR spacer
ggtctcgatcggcgtgctgaccagcaagttgc	Protospacer
**.  * * **************** ***.**

19. spacer 1.3|2988256|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

gcgaaatagtggggaaaaacccctggttaacc	CRISPR spacer
tttcaatattggggaaaaacccctcgttacct	Protospacer
 .  **** *************** **** *.

20. spacer 1.5|2988378|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_021709 (Alteromonas mediterranea 615 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atattgatactgttctcaagcgccgttttagc	CRISPR spacer
atggtatcgctgttctcaatcgcctttttagc	Protospacer
**. *. ..********** **** *******

21. spacer 1.6|2988439|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to KM389216 (UNVERIFIED: Pseudomonas phage F_ET605sp/Pa1651 clone contig00001 genomic sequence) position: , mismatch: 8, identity: 0.75

tggcgccagaaatattcatgatcatcgggatt	CRISPR spacer
gagcctttgaattattcgtgatcatcgggatt	Protospacer
 .** .. *** *****.**************

22. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026494 (Escherichia coli strain HS13-1 plasmid pHS13-1-IncF, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

23. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU664810 (Escherichia coli strain 11.3-R3 plasmid pCERC5, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

24. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY007017 (Escherichia coli strain 14.3-R4 plasmid pCERC9, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

25. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to KR827684 (Escherichia coli plasmid pCERC3, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

26. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP119165 (Escherichia coli strain QT598 plasmid pEC598, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

27. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP398867 (Escherichia coli strain DB04277 plasmid pDB4277, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

28. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010147 (Escherichia coli strain D5 plasmid B, complete genome) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

29. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010232 (Escherichia coli strain S30 plasmid A, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

30. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017611 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

31. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010158 (Escherichia coli strain D10 plasmid A, complete genome) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

32. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043952 (Escherichia coli strain ST95-32 plasmid pST95-32-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

33. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010141 (Escherichia coli strain D3 plasmid A, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

34. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049349 (Escherichia coli strain 3R plasmid p3R-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

35. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038182 (Escherichia coli strain 2 HS-C plasmid p2HS-C-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

36. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021087 (Escherichia coli strain 13P460A plasmid p13P460A-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

37. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053732 (Escherichia coli strain CP55_Sichuan plasmid pCP55-IncFIB, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

38. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020546 (Escherichia coli strain ZJ3920 plasmid pZJ3920-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

39. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to CP043737 (Escherichia coli strain CVM N17EC0616 plasmid pN17EC0616-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

40. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010316 (Escherichia coli strain 789 plasmid pAPEC-O78-ColV) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

41. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LS992167 (Escherichia coli isolate Escherichia coli str. TO6 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

42. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019282 (Escherichia coli strain 13P484A plasmid p13P484A-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

43. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034739 (Escherichia coli strain L65 plasmid pL65-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

44. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054369 (Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

45. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048296 (Escherichia coli strain CVM N18EC0432 plasmid pN18EC0432-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

46. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019251 (Escherichia coli strain 13KWH46 plasmid p13KWH46-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

47. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021728 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

48. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP005931 (Escherichia coli APEC IMT5155 plasmid p1ColV5155, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

49. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026854 (Escherichia coli strain MS7163 plasmid pMS7163A, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

50. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019247 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

51. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019268 (Escherichia coli strain 13C1079T plasmid p13C1079T-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

52. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029243 (Escherichia coli strain ECCRA-119 plasmid pTB201, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

53. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to CM019851 (Escherichia coli strain CVM N17EC0326 plasmid pN17EC0326-1, complete sequence, whole genome shotgun sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

54. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049355 (Escherichia coli strain T28R plasmid pT28R-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

55. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033091 (Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

56. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to LT906556 (Escherichia coli isolate E. coli RL465 genome assembly, plasmid: I) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

57. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032263 (Escherichia coli strain AR_0089 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

58. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027357 (Escherichia coli strain 2013C-4991 plasmid unnamed2) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

59. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019018 (Escherichia coli strain Ecol_244 plasmid pEC244_2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

60. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019007 (Escherichia coli strain Ecol_AZ159 plasmid pECAZ159_1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

61. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011916 (Escherichia coli strain PSUO2 plasmid pPSUO2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

62. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019456 (Escherichia coli strain FHI_NMBU_03 plasmid pFHI_NMBU_03_1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

63. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018994 (Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

64. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047878 (Escherichia coli strain LD22-1 plasmid pLD22-1-135kb, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

65. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046718 (Escherichia coli strain T16R plasmid pT16R-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

66. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041303 (Escherichia coli strain MSHS 133 plasmid pCys-11, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

67. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_011964 (Escherichia coli plasmid pAPEC-O103-ColBM, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

68. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012636 (Escherichia coli strain SF-088 plasmid pSF-088-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

69. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022731 (Escherichia coli strain SA186 plasmid pSA186_2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

70. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022732 (Escherichia coli strain SA186 plasmid pSA186_3, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

71. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985319 (Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_pII) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

72. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019676 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

73. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_024956 (Escherichia coli strain K-12 plasmid pDM0133, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

74. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_025179 (Escherichia coli plasmid pC59-153, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

75. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to CP042897 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_01, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

76. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051689 (Escherichia coli strain SCU-387 plasmid pSCU-387-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

77. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012377 (Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

78. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to KU932025 (Escherichia coli plasmid pEC14I, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

79. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_025175 (Escherichia coli plasmid pH2332-166, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

80. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_025139 (Escherichia coli plasmid pH2291-144, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

81. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LS992172 (Escherichia coli isolate Escherichia coli str. TO73 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

82. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041301 (Escherichia coli strain MSHS 472 plasmid pCys-6, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

83. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to CP054455 (Escherichia coli strain SCU-487 plasmid pSCU-487-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

84. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022166 (Escherichia coli strain M160133 plasmid pM160133_p2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

85. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047577 (Escherichia coli strain 94EC plasmid p94EC-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

86. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to KU578032 (Escherichia coli plasmid pCERC4, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

87. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026643 (Escherichia coli strain FORC_082 plasmid pFORC82_2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

88. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042586 (Escherichia coli strain LD91-1 plasmid pLD91-1-146kb, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

89. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023363 (Escherichia coli strain 144 plasmid 134q, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

90. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023367 (Escherichia coli strain 1428 plasmid p111, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

91. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023384 (Escherichia coli strain 1223 plasmid p147, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

92. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_010409 (Escherichia coli plasmid pVM01, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

93. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to CP043743 (Escherichia coli strain CVM N17EC0211 plasmid pN17EC0211, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

94. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MN419430 (Escherichia coli strain 2016-4017437 plasmid p17437, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

95. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020934 (Escherichia coli strain HB-Coli0 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

96. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR025097 (Escherichia coli isolate EC-7215 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

97. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_011980 (Escherichia coli chi7122 plasmid pAPEC-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

98. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030791 (Escherichia coli strain APEC O2-211 plasmid pAPEC-O2-211A-ColV, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

99. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053282 (Escherichia coli strain SCU-308 plasmid pSCU-308-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

100. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_020271 (Escherichia coli O25b:H4-ST131 str. EC958 strain ST131 plasmid pJIE186-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

101. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MN848327 (Escherichia coli strain T16RC plasmid pT16RC-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

102. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MN823988 (Escherichia coli strain 14406 plasmid p14406-FII, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

103. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR740777 (Escherichia coli strain BEN2908 isolate 1 day old chicken plasmid pAPEC2908) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

104. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047667 (Escherichia coli strain LD26-1 plasmid pLD26-1-135kb, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

105. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041299 (Escherichia coli O1:H42 strain CLSC36 plasmid pCys-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

106. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031107 (Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

107. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR740759 (Escherichia coli strain BEN5202 isolate laying hen 51 weeks old plasmid paAPEC5202) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

108. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012113 (Escherichia coli strain PSUO78 plasmid pPSUO78_1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

109. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019055 (Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

110. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048026 (Escherichia coli strain GZEC065 plasmid pTEM1-GZEC065, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

111. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029744 (Escherichia coli strain AR_0085 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

112. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to LC484363 (Escherichia coli C1 plasmid pColV-C1 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

113. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041920 (Escherichia coli strain Ec40743 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

114. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051224 (Escherichia coli strain SCZE5 plasmid pSCZE2) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

115. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_007675 (Escherichia coli A2363 plasmid pAPEC-O2-ColV, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

116. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_018954 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

117. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_018966 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pSSAP03302A, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

118. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014489 (Escherichia coli strain G749 plasmid pG749_1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

119. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to CP027485 (Escherichia coli strain 2013C-4390 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

120. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024140 (Escherichia coli strain 14EC020 plasmid p14EC020b, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

121. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_011747 (Escherichia coli S88 plasmid pECOS88, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

122. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049102 (Escherichia coli strain EC28 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

123. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_017659 (Escherichia coli O83:H1 str. NRG 857C plasmid pO83_CORR, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

124. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026940 (Escherichia coli strain CFS3313 plasmid pCFS3313-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

125. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042245 (Escherichia coli strain PU-1 plasmid pColV-PU1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

126. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025403 (Escherichia coli strain MS8345 plasmid pMS8345B, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

127. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985293 (Escherichia coli strain 4410-1 plasmid RCS79_p, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

128. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MN807689 (Escherichia coli strain A241 plasmid pA241-TEM, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

129. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK430046 (Escherichia coli strain 11.4-R4 plasmid pCERC13, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

130. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK461929 (Escherichia coli strain 2009_36 plasmid p2009_36_F, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

131. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK416151 (Escherichia coli strain 6TC9eCTX plasmid pHNTC9e, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

132. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK461928 (Escherichia coli strain F2_14D plasmid pF2_14D_F, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

133. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK878891 (Escherichia coli strain J53 plasmid pMG336, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

134. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK878890 (Escherichia coli strain J53 plasmid pMG337, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

135. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN053930 (Escherichia coli strain 2.3-R4 plasmid pCERC14, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

136. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH422552 (Escherichia coli strain L-I1 plasmid pIncFIB, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

137. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH580302 (Escherichia coli strain 1107 plasmid p1107-118K, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

138. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006635 (Escherichia coli PCN033 plasmid p3PCN033, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

139. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG014722 (Escherichia coli strain P2-3 plasmid pP2-3T, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

140. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF474175 (Escherichia coli strain J53/pNIT-HK plasmid pNIT-HK, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

141. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG825372 (Escherichia coli strain 1106 plasmid p1106-IncFIB, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

142. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

143. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG825378 (Escherichia coli strain 1108 plasmid p1108-IncFIB, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

144. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF174860 (Escherichia coli strain 6/14/6b plasmid pIncF-MU4, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

145. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG385063 (Escherichia coli strain WF5-29 plasmid pWF5-29, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

146. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG838205 (Escherichia coli strain 92944 plasmid p92944-mph, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

147. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH195200 (Escherichia coli strain 2009-52 plasmid pSDJ2009-52F, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

148. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025329 (Escherichia coli strain ExPEC XM plasmid unnamed) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

149. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_023327 (Escherichia coli ACN001 plasmid pACN001-B, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

150. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to CP043741 (Escherichia coli strain CVM N17EC0320 plasmid pN17EC0320-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

151. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MN816372 (Escherichia coli strain A130 plasmid pA130-TEM, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

152. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_009837 (Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaatgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  *******.************.**

153. spacer 1.15|2988988|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014519 (Sinomonas atrocyanea strain KCTC 3377 plasmid pSA01, complete sequence) position: , mismatch: 8, identity: 0.75

agctccggcagggtcatgtcccggcaggtgcg	CRISPR spacer
agctgcggcagggtcaggtcccgggcgatctt	Protospacer
**** *********** *******  *.* .

154. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054600 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ggctgcgccgccgccagcgcggccagcgcctc	Protospacer
...* . *.** ********************

155. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 8, identity: 0.75

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cagccgtgggcggccagcacggccagcgcctc	Protospacer
 * .. *  *********.*************

156. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034811 (Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
acaacgtctgccgccaccgcggccagcgcctg	Protospacer
*   . ***** **** **************

157. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
aggatgaccgcgccgagcgcggccagcgcctc	Protospacer
*.  *  *.*** * *****************

158. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cccatctgtgcgcgcagcgcggccagcgcctc	Protospacer
  . *.* ****  ******************

159. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cccatctgtgcgcgcagcgcggccagcgcctc	Protospacer
  . *.* ****  ******************

160. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cccatctgtgcgcgcagcgcggccagcgcctc	Protospacer
  . *.* ****  ******************

161. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cccatctgtgcgcgcagcgcggccagcgcctc	Protospacer
  . *.* ****  ******************

162. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cccatctgtgcgcgcagcgcggccagcgcctc	Protospacer
  . *.* ****  ******************

163. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.75

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
aggatgaccgcgccgagcgcggccagcgcctc	Protospacer
*.  *  *.*** * *****************

164. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

aattttt-----ctgcggccagcgcggccagcgcctc	CRISPR spacer
-----ttgaaggcggcggcaagcgcggcaagcgcctc	Protospacer
     **     * ***** ******** ********

165. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 8, identity: 0.75

aattttt-----ctgcggccagcgcggccagcgcctc	CRISPR spacer
-----ttgaaggcggcggcaagcgcggcaagcgcctc	Protospacer
     **     * ***** ******** ********

166. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014598 (Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

----aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcgaaa----ccggcggccagcgcggccaccgtctc	Protospacer
    **    .* **************** **.***

167. spacer 2.7|3005912|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tccatcgcttttgccaatct---atcagacaattt	CRISPR spacer
accatcacttttgccaaactatcatcatagaa---	Protospacer
 *****.********** **   **** * **

168. spacer 2.8|3005973|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgactaacggcgtgctgaccagccagtcgc	CRISPR spacer
cgatgccgacggcgtgctgaccatcccgtcgc	Protospacer
 *  .*..*************** ** *****

169. spacer 2.8|3005973|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgactaacggcgtgctgaccagccagtcgc	CRISPR spacer
gttgaagaactgcgtgctgaccagccggtcca	Protospacer
* .**  *** ***************.***

170. spacer 2.8|3005973|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgacta-acggcgtgctgaccagccagtcgc	CRISPR spacer
-gtgatcgcccggcgggctgaccagcaagtcgc	Protospacer
 *.**...  ***** ********** ******

171. spacer 1.2|2988195|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.719

atggatggctcatatccggtttctgtttctgc	CRISPR spacer
tcggctggctcatttccggtttctgggtgacc	Protospacer
 .** ******** ***********  *   *

172. spacer 1.2|2988195|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.719

atggatggctcatatccggtttctgtttctgc	CRISPR spacer
tcggctggctcatttccggtttctgggtgacc	Protospacer
 .** ******** ***********  *   *

173. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to KY554763 (Lactococcus phage LW32, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattccagaaaatgcctgggtgatgatc	CRISPR spacer
atagcattccagaaaatgaatgggtgataaga	Protospacer
 * ..*************  ********.*

174. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_049806 (Lactococcus phage LW31, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattccagaaaatgcctgggtgatgatc	CRISPR spacer
atagcattccagaaaatgaatgggtgataaga	Protospacer
 * ..*************  ********.*

175. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MN855809 (Siphoviridae sp. isolate 134, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattccagaaaatgcctgggtgatgatc	CRISPR spacer
atagcattccagaaaatgaatgggtgataaga	Protospacer
 * ..*************  ********.*

176. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to KY554765 (Lactococcus phage LW4, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattccagaaaatgcctgggtgatgatc	CRISPR spacer
atagcattccagaaaatgaatgggtgataaga	Protospacer
 * ..*************  ********.*

177. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MN528768 (Lactococcus phage P596, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattccagaaaatgcctgggtgatgatc	CRISPR spacer
atagcattccagaaaatgaatgggtgataaga	Protospacer
 * ..*************  ********.*

178. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to KY554764 (Lactococcus phage LW33, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattccagaaaatgcctgggtgatgatc	CRISPR spacer
atagcattccagaaaatgaatgggtgataaga	Protospacer
 * ..*************  ********.*

179. spacer 1.7|2988500|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_049805 (Lactococcus phage phiQ1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattccagaaaatgcctgggtgatgatc	CRISPR spacer
atagcattccagaaaatgaatgggtgataaga	Protospacer
 * ..*************  ********.*

180. spacer 1.10|2988683|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcaggcttgacgacagtctccagccactcctg	CRISPR spacer
ttgcccttgaacacagtctccagccactgcgc	Protospacer
*..  *****  **************** *

181. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gtgccgagcgcggccagcgcggccagcgcctc	Protospacer
.  ..   .***********************

182. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134468 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 26, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
tcggcgtgcgcggccagcgcggccagggcctc	Protospacer
    . * .***************** *****

183. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020695 (Sulfitobacter sp. D7 plasmid p1SUD7, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcgaacccggcggcgagcgcggccagcgcctc	Protospacer
.    ..* ***** *****************

184. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014708 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_4p, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccacgacctgcggccagtgcggcaagcgcctc	Protospacer
   .  .**********.***** ********

185. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_014642 (Achromobacter xylosoxidans A8 plasmid pA82, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcg---------gccagcgcggccagcgcctc	CRISPR spacer
---------gcgggcatggccgccagcgcggccagcgcctc	Protospacer
         ***         ********************

186. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
agctccagagcggccagcgccgccagcgcgtc	Protospacer
*..*..   *********** ******** **

187. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009293 (Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgatttctgcagccagcgcggccggcgtcgt	Protospacer
    *******.************.***.* .

188. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgctttctgcggacagcgcggcccgcgatgc	Protospacer
   .********* ********** *** . *

189. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015094 (Pelagibaca abyssi strain JLT2014 plasmid pPABY6, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gccagctctgcggcctgcgcggcctgcgccgc	Protospacer
. .  .********* ******** ***** *

190. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ttctcggctgccgccagcgcggtcagcgcctt	Protospacer
  .*.  **** **********.********.

191. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgctttctgcggacagcgcggcccgcgatgc	Protospacer
   .********* ********** *** . *

192. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgctttctgcggacagcgcggcccgcgatgc	Protospacer
   .********* ********** *** . *

193. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgctttctgcggacagcgcggcccgcgatgc	Protospacer
   .********* ********** *** . *

194. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
agcccttcttcggccagcgccgccagcgcgct	Protospacer
*....**** ********** ******** ..

195. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
agcccttcttcggccagcgccgccagcgcgct	Protospacer
*....**** ********** ******** ..

196. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgctttctgcggacagcgcggcccgcgatgc	Protospacer
   .********* ********** *** . *

197. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgctttctgcggacagcgcggcccgcgatgc	Protospacer
   .********* ********** *** . *

198. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cggtgctcggcggccagcgcggccagggcccg	Protospacer
 . * .** ***************** ***.

199. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgctttctgcggacagcgcggcccgcgatgc	Protospacer
   .********* ********** *** . *

200. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgctttctgcggacagcgcggcccgcgatgc	Protospacer
   .********* ********** *** . *

201. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgctttctgcggacagcgcggcccgcgatgc	Protospacer
   .********* ********** *** . *

202. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgctttctgcggacagcgcggcccgcgatgc	Protospacer
   .********* ********** *** . *

203. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041157 (Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
tggatttctgctgccagcgcgtccagctctgc	Protospacer
 .  ******* ********* ***** *. *

204. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041164 (Leisingera aquaemixtae strain R2C4 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
acccccgcagcagccagcgaggccagcgcctc	Protospacer
* .... * **.******* ************

205. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
accccgacggcgtccagggcggccagcgcctc	Protospacer
* ...  * *** **** **************

206. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cccatctgcgcgcgcagcgcggccagcgcctc	Protospacer
  . *.* .***  ******************

207. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cccatctgcgcgcgcagcgcggccagcgcctc	Protospacer
  . *.* .***  ******************

208. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gtgtaggcggcgcccagcgcggccagcgcgtc	Protospacer
.  *   * *** **************** **

209. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gtgtaggcggcgcccagcgcggccagcgcgtc	Protospacer
.  *   * *** **************** **

210. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gtgtaggcggcgcccagcgcggccagcgcgtc	Protospacer
.  *   * *** **************** **

211. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cccatctgcgcgcgcagcgcggccagcgcctc	Protospacer
  . *.* .***  ******************

212. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cccatctgcgcgcgcagcgcggccagcgcctc	Protospacer
  . *.* .***  ******************

213. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cagccatgcgcggcaagcgccgccagcgcctc	Protospacer
 * .. * .***** ***** ***********

214. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gtgtaggcggcgcccagcgcggccagcgcgtc	Protospacer
.  *   * *** **************** **

215. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032156 (Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ggatcggccgcggccagcgcggacagctcctc	Protospacer
.. *.  *.************* **** ****

216. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 9, identity: 0.719

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gccctctgcgcggccaccgcggcctgcgcctc	Protospacer
. ..*.* .******* ******* *******

217. spacer 2.8|3005973|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MT723940 (Mycobacterium phage Ellie, complete genome) position: , mismatch: 9, identity: 0.719

ggcgactaacggcgtgctgaccagccagtcgc	CRISPR spacer
ggcgactaacggcgtgatgatcaaacgcaagt	Protospacer
**************** ***.**. *.   *.

218. spacer 2.8|3005973|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to MF324915 (Mycobacterium phage Amgine, complete genome) position: , mismatch: 9, identity: 0.719

ggcgactaacggcgtgctgaccagccagtcgc	CRISPR spacer
ggcgactaacggcgtgatgatcaaacgcaagt	Protospacer
**************** ***.**. *.   *.

219. spacer 1.11|2988744|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_005838 (Thermus thermophilus HB27 plasmid pTT27, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgcgcgggctatcgttcaggactattttt	CRISPR spacer
taccgcgtgggctaccgttcaggatgcgcggt	Protospacer
 ******.******.*********.   .  *

220. spacer 1.11|2988744|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019802 (Thermus thermophilus strain HC11 plasmid pHC11, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgcgcgggctatcgttcaggactattttt	CRISPR spacer
taccgcgtgggctaccgttcaggatgcgcggt	Protospacer
 ******.******.*********.   .  *

221. spacer 1.11|2988744|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgcgcgggctatcgttcaggactattttt	CRISPR spacer
taccgcgtgggctaccgttcaggatgcgcggt	Protospacer
 ******.******.*********.   .  *

222. spacer 1.11|2988744|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgcgcgggctatcgttcaggactattttt	CRISPR spacer
taccgcgtgggctaccgttcaggatgcgcggt	Protospacer
 ******.******.*********.   .  *

223. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
agcagcgctccggcccgcgcggccagcgccag	Protospacer
*..  . ** ***** **************

224. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020385 (Rhodovulum sp. MB263 plasmid pRSMBA, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gtcgccggagcggccagctcggccagcgcctc	Protospacer
. . ..   ********* *************

225. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
agcagcgctccggcccgcgcggccagcgccag	Protospacer
*..  . ** ***** **************

226. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcaacgcttgcggccagcgcggccagggcatc	Protospacer
.   . ..****************** ** **

227. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttct-------gcggccagcgcggccagcgcctc	CRISPR spacer
-------ccgggcagggcggccagcgcggcccgcacctc	Protospacer
       *.       *************** **.****

228. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgggcgcggcggccagcacggccggcgcctc	Protospacer
     . * *********.*****.*******

229. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013512 (Rhizobium sp. N1314 plasmid pRspN1314a, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
tccaaccctgcggccagggcggcgagcgcctg	Protospacer
  .  ..********** ***** *******

230. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ccgggcgcggcggccagcacggccggcgcctc	Protospacer
     . * *********.*****.*******

231. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cgcagccgtgcggcctgggcggccagcgcctc	Protospacer
 ..  .. ******* * **************

232. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gacagccctgctgcctgcgcggccagcgcccg	Protospacer
.*.  ..**** *** **************.

233. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cgcgccacggcagccagcccggccagcgcctc	Protospacer
 .. .. * **.****** *************

234. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
acaggcggcgcgggcagcgcgggcagcgcctc	Protospacer
*    .  .**** ******** *********

235. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046332 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
tcggccgcagcgtccagcgcggcctgcgcctc	Protospacer
    .. * *** *********** *******

236. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gacagccctgctgcctgcgcggccagcgcccg	Protospacer
.*.  ..**** *** **************.

237. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gtgtgcggcgcggccagctcggcgagcgcctc	Protospacer
.  * .  .********* **** ********

238. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
tcgcccccggccgccagcgccgccagcgcctc	Protospacer
   ....* ** ******** ***********

239. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cttgcccttgcggccggcgcggccggcgcctg	Protospacer
  * ....*******.********.******

240. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
tgatcgcgggcggcaagcgcggcaagcgcctc	Protospacer
 . *. .  ***** ******** ********

241. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
acaggcggcgcgggcagcgcgggcagcgcctc	Protospacer
*    .  .**** ******** *********

242. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
tccagcgccgcggccatcgcggccagcgcgtc	Protospacer
  .  . *.******* ************ **

243. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
acaggcggcgcgggcagcgcgggcagcgcctc	Protospacer
*    .  .**** ******** *********

244. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_006466 (Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
tcggccgcagcgtccagcgcggcctgcgcctc	Protospacer
    .. * *** *********** *******

245. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ggcgtgaaggcgtccagcgtggccagcgcctc	Protospacer
... *    *** ******.************

246. spacer 1.1|2988134|32|NC_011149|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttttcagcccttgccgactgcggaacgcccct	CRISPR spacer
cgccgcacccttgccgactgcgggatgcccga	Protospacer
. ..  .****************.*.****

247. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

248. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020695 (Sulfitobacter sp. D7 plasmid p1SUD7, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcgcggtctgcggcgagggcggccagcgcggg	Protospacer
.  .  ******** ** ***********

249. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

250. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

251. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

252. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

253. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

254. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gggacggctgcggccagcgcggccacggccca	Protospacer
..  .  ******************  ***.

255. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ctggcccttgcggccggcgcggccggcgcctg	Protospacer
    ....*******.********.******

256. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cgccaccgggcggccagcgcggccaccgcgtc	Protospacer
 ... ..  **************** *** **

257. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015420 (Rhodovulum sulfidophilum DSM 1374 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gtcgccggcgccgccagctcggccagcgcctc	Protospacer
. . ..  .** ****** *************

258. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

259. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
cgccaccgggcggccagcgcggccaccgcgtc	Protospacer
 ... ..  **************** *** **

260. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035514 (Haematobacter massiliensis strain OT1 plasmid pOT1-4, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ggccggcgggcggcaagggcggccagcgcctc	Protospacer
....  .  ***** ** **************

261. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014801 (Rhodovulum sulfidophilum plasmid Plasmid1 DNA, complete genome, strain: DSM 2351) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gtcgccggcgccgccagctcggccagcgcctc	Protospacer
. . ..  .** ****** *************

262. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

263. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

264. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

265. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

266. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

267. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gcccggctggcggccagcggggccagcgcttc	Protospacer
. ..  .. ********** *********.**

268. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ctggcccttgcggccggcgcggccggcgcctg	Protospacer
    ....*******.********.******

269. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ctggcccttgcggccggcgcggccggcgcctg	Protospacer
    ....*******.********.******

270. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
gccaggcgcgcggcctgcgcggccagggcctc	Protospacer
. .   . .****** ********** *****

271. spacer 1.18|2989171|32|NC_011149|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

aatttttctgcggccagcgcggccagcgcctc	CRISPR spacer
ttgccatcggcggccagcgcgtccagcgcacg	Protospacer
   .. ** ************ ******* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

932632 : 941980

Dickeya_phage(16.67%)

protease,integrase

attL 933883:933897|attR 947544:947558

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001201750.1\|932632_933751_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9
WP_000125885.1\|933747_935694_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	41.9
933883:933897	attL	NA	NA	NA	NA
WP_000447499.1\|935823_936045_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000520789.1\|936368_936689_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000934057.1\|936719_938996_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.1e-164	42.3
WP_001747668.1\|939492_939969_-	hypothetical protein	NA	NA	NA	NA
WP_001117984.1\|941243_941441_-	hypothetical protein	NA	NA	NA	NA
WP_001747671.1\|941602_941980_-\|integrase	integrase	A0A077KET4	Ralstonia_phage	1.0e-19	40.2
947544:947558	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1086219 : 1123455

Enterobacteria_phage(20.0%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100148601.1\|1086219_1087475_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	2.4e-17	33.9
WP_000623370.1\|1087755_1088214_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_001227394.1\|1088337_1088709_-	hypothetical protein	NA	NA	NA	NA
WP_001022123.1\|1088717_1089158_-	hypothetical protein	NA	NA	NA	NA
WP_000928422.1\|1089177_1089690_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_001216386.1\|1089730_1090177_-	DUF1240 domain-containing protein	NA	NA	NA	NA
WP_153274191.1\|1090218_1090458_+	hypothetical protein	NA	NA	NA	NA
WP_001139255.1\|1092621_1093464_-	hypothetical protein	NA	NA	NA	NA
WP_000002328.1\|1093487_1093967_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_000076070.1\|1093985_1095347_-	ImpA family type VI secretion system protein	NA	NA	NA	NA
WP_001137105.1\|1095357_1098819_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_000365805.1\|1098897_1100310_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_000089147.1\|1100311_1101049_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_000614296.1\|1101045_1103781_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.9e-84	31.5
WP_000343978.1\|1103793_1104552_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_000246455.1\|1104556_1105888_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_130549539.1\|1105890_1106394_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_000796942.1\|1106420_1107707_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_000509052.1\|1107731_1108820_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_000393863.1\|1108783_1110637_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_000611701.1\|1110641_1111058_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_000058004.1\|1111054_1112527_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_000031252.1\|1112817_1113321_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_001142966.1\|1113949_1114468_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_000103453.1\|1114690_1116832_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.9e-23	25.4
WP_000014621.1\|1116900_1121067_+	RHS repeat protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.4e-21	40.6
WP_000739389.1\|1121134_1122100_+	Sel1 repeat protein	NA	NA	NA	NA
WP_109188131.1\|1122293_1123455_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.2e-47	40.8

DBSCAN-SWA_3

2128790 : 2139297

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000126349.1\|2128790_2130104_-	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1
WP_000565903.1\|2130130_2131210_-	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.7e-16	24.5
WP_000648785.1\|2131214_2131988_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000018219.1\|2132003_2132978_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000973710.1\|2132983_2133535_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-52	58.6
WP_000857531.1\|2133535_2134414_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.1e-108	65.5
WP_001023665.1\|2134461_2135361_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.1e-29	36.0
WP_000697849.1\|2135360_2136446_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.0e-101	53.6
WP_000981469.1\|2136822_2137716_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_001111843.1\|2137893_2139297_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5

DBSCAN-SWA_4

2215327 : 2224498

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195330.1\|2215327_2217361_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
WP_000703143.1\|2217601_2218060_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	2.4e-52	71.9
WP_001197951.1\|2218231_2218762_+	YehR family lipoprotein	NA	NA	NA	NA
WP_000950413.1\|2218818_2219286_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_000598637.1\|2219332_2220052_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272851.1\|2220048_2221734_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.3
WP_001240418.1\|2221956_2222688_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_001261696.1\|2222747_2222855_+	protein YohO	NA	NA	NA	NA
WP_000824850.1\|2222835_2223567_-	ABC transporter permease	NA	NA	NA	NA
WP_000569166.1\|2223550_2224498_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2

DBSCAN-SWA_5

2675745 : 2821745

145

Salmonella_phage(45.88%)

terminase,tRNA,head,holin,tail,portal,integrase,capsid,plate

attL 2733414:2733430|attR 2827734:2827750

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001134564.1\|2675745_2676297_-\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
WP_000253558.1\|2676321_2676957_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_000361660.1\|2676960_2678322_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_001048541.1\|2678332_2679226_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_000995695.1\|2679341_2680190_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_000684021.1\|2680228_2681146_-	oxidoreductase	NA	NA	NA	NA
WP_001276364.1\|2681167_2682364_-	OFA family MFS transporter	NA	NA	NA	NA
WP_001022463.1\|2682479_2683406_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.0e-09	24.4
WP_001196291.1\|2683443_2683704_+	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	4.9e-18	53.5
WP_000986043.1\|2683815_2684196_-	holo-ACP synthase	NA	NA	NA	NA
WP_000818962.1\|2684195_2684927_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_000399380.1\|2684938_2685667_-	DNA repair protein RecO	NA	NA	NA	NA
WP_000102230.1\|2685678_2686584_-	GTPase Era	NA	NA	NA	NA
WP_001068341.1\|2686580_2687261_-	ribonuclease III	A0A2K9L5P0	Tupanvirus	7.4e-21	31.8
WP_000002559.1\|2687534_2688509_-	signal peptidase I	NA	NA	NA	NA
WP_000790154.1\|2688525_2690325_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9
WP_000589087.1\|2690575_2691055_-	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_000812021.1\|2691051_2692008_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_001168374.1\|2692007_2692658_-	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_000003307.1\|2692689_2693265_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_014344135.1\|2693261_2693426_-	rpoE leader peptide RseD	NA	NA	NA	NA
WP_000989185.1\|2693689_2695312_+	L-aspartate oxidase	NA	NA	NA	NA
WP_000083343.1\|2695296_2696034_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219174.1\|2696164_2697499_+	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
WP_001747585.1\|2697516_2698416_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000188414.1\|2698518_2699106_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627811.1\|2699167_2699551_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
WP_000179975.1\|2699869_2700559_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	2.1e-55	50.0
WP_000997368.1\|2700674_2701712_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098732.1\|2701915_2702335_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
WP_000183644.1\|2702407_2703088_+\|tRNA	tRNA-uridine aminocarboxypropyltransferase	NA	NA	NA	NA
WP_000082651.1\|2703141_2705802_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000949286.1\|2705916_2707272_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_001264468.1\|2707314_2707638_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_000807814.1\|2707634_2708936_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.4e-43	30.1
WP_000985658.1\|2709039_2709495_-	DUF4385 domain-containing protein	E3SMI8	Prochlorococcus_phage	8.6e-34	49.3
WP_001235092.1\|2715550_2718124_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.5
WP_000992634.1\|2718253_2718985_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079130.1\|2718981_2719962_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197660.1\|2720093_2720831_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178449.1\|2721102_2721441_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_001156921.1\|2721598_2721985_+	hypothetical protein	NA	NA	NA	NA
WP_000777801.1\|2722120_2723593_-	AAA family ATPase	NA	NA	NA	NA
WP_000977529.1\|2724710_2726414_-	hypothetical protein	F1BUJ7	Cronobacter_phage	1.7e-223	81.3
WP_000200791.1\|2726413_2726959_-	hypothetical protein	F1BUJ9	Cronobacter_phage	3.5e-58	71.4
WP_000267954.1\|2726930_2727656_-	hypothetical protein	F1BUK1	Cronobacter_phage	3.8e-68	56.4
WP_001215677.1\|2727645_2728176_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	4.4e-13	32.4
WP_000084303.1\|2728178_2730191_-\|tail	phage tail protein	F1BUK3	Cronobacter_phage	2.1e-148	81.2
WP_001001824.1\|2730200_2730788_-	hypothetical protein	F1BUK5	Cronobacter_phage	1.1e-89	82.1
WP_000136927.1\|2730780_2731965_-\|plate	baseplate J/gp47 family protein	F1BUK6	Cronobacter_phage	5.1e-179	78.6
WP_001002797.1\|2731961_2732291_-	DUF2590 family protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
WP_000811100.1\|2732287_2734255_-\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	1.9e-271	70.7
2733414:2733430	attL	NA	NA	NA	NA
WP_000411500.1\|2734442_2734700_-\|tail	putative phage tail assembly chaperone	A5X9I7	Aeromonas_virus	2.3e-20	61.0
WP_000376378.1\|2734846_2735179_-	hypothetical protein	F1BUL2	Cronobacter_phage	4.4e-35	70.0
WP_000175558.1\|2735178_2735520_-	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	2.2e-50	91.1
WP_001154426.1\|2735516_2735813_-\|holin	phage holin family protein	C7BGD7	Burkholderia_phage	2.4e-16	48.2
WP_000166745.1\|2735825_2736281_-	DUF2597 family protein	F1BUL4	Cronobacter_phage	1.7e-58	71.5
WP_000220184.1\|2736277_2737405_-	DUF2586 family protein	F1BUL5	Cronobacter_phage	8.1e-174	82.9
WP_000606933.1\|2737401_2738106_-	hypothetical protein	F1BUL6	Cronobacter_phage	4.0e-70	59.5
WP_000080871.1\|2738102_2738585_-\|tail	phage tail protein	F1BUL7	Cronobacter_phage	2.3e-37	48.7
WP_000491223.1\|2738581_2739034_-\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	1.2e-48	64.7
WP_001177276.1\|2739132_2739831_-\|terminase	terminase	F1BUM0	Cronobacter_phage	3.6e-63	52.6
WP_001176503.1\|2739842_2740871_-\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	3.7e-133	71.6
WP_023375469.1\|2740905_2741742_-\|capsid	capsid scaffolding protein	F1BUM4	Cronobacter_phage	3.6e-46	52.3
WP_001151938.1\|2741952_2743737_+	hypothetical protein	F1BUM5	Cronobacter_phage	1.8e-247	69.7
WP_000746494.1\|2743733_2744753_+\|portal	phage portal protein	F1BUM7	Cronobacter_phage	1.3e-135	68.5
WP_001264830.1\|2744806_2745076_+	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	5.1e-34	78.4
WP_000994501.1\|2745103_2747761_-	toprim domain-containing protein	A0A077K8T2	Ralstonia_phage	1.2e-244	47.5
WP_000922120.1\|2747799_2748018_-	hypothetical protein	NA	NA	NA	NA
WP_000681787.1\|2748020_2748590_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	2.6e-43	46.3
WP_000645096.1\|2748599_2748932_-	hypothetical protein	NA	NA	NA	NA
WP_000661531.1\|2748957_2749296_-	hypothetical protein	NA	NA	NA	NA
WP_000185337.1\|2749393_2749699_+	helix-turn-helix transcriptional regulator	A0A0M5M1I9	Salmonella_phage	1.6e-15	47.5
WP_024132356.1\|2749765_2750758_+\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	1.4e-108	58.2
WP_010989056.1\|2750921_2750969_+	pheA operon leader peptide PheL	NA	NA	NA	NA
WP_000200080.1\|2751068_2752229_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000210991.1\|2752189_2753098_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_000225191.1\|2753155_2754277_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168062.1\|2754286_2755357_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
WP_001212379.1\|2755796_2756315_+	YfiR family protein	NA	NA	NA	NA
WP_001030981.1\|2756307_2757528_+	diguanylate cyclase DgcN	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
WP_000065257.1\|2757684_2758032_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000469804.1\|2758072_2758840_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043266.1\|2758884_2759433_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256453.1\|2759451_2759700_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460052.1\|2759952_2761314_-	signal recognition particle protein	NA	NA	NA	NA
WP_001537507.1\|2761479_2762271_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_127172650.1\|2762290_2763577_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001294018.1\|2763697_2764303_+	hypothetical protein	NA	NA	NA	NA
WP_001518875.1\|2764337_2764928_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059155.1\|2765051_2765930_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880958.1\|2766015_2767677_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203445.1\|2767825_2768164_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001112990.1\|2768329_2768620_-	RnfH family protein	NA	NA	NA	NA
WP_000242603.1\|2768609_2769086_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_001518569.1\|2769235_2769718_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
WP_001237691.1\|2770332_2781807_+	biofilm-associated protein BapA	NA	NA	NA	NA
WP_000533865.1\|2781871_2783281_+	TolC family outer membrane protein	NA	NA	NA	NA
WP_000196133.1\|2783277_2785458_+	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	1.3e-18	34.0
WP_072101449.1\|2785465_2786629_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_000980498.1\|2787180_2787399_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	2.1e-38	100.0
WP_001102264.1\|2787467_2788568_-	phage late control D family protein	E5G6Q3	Salmonella_phage	3.4e-193	95.4
WP_000980408.1\|2788564_2789050_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.3e-67	99.2
WP_001282774.1\|2789046_2791854_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	99.4
WP_000763316.1\|2791846_2791966_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	1.8e-15	100.0
WP_001280962.1\|2791980_2792283_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	2.5e-45	100.0
WP_001207647.1\|2792337_2792853_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	9.3e-93	100.0
WP_000046109.1\|2792862_2794035_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.7e-223	99.7
WP_000680168.1\|2794165_2794693_-\|tail	tail fiber assembly protein	NA	NA	NA	NA
WP_001274653.1\|2794695_2796462_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	4.7e-136	52.3
WP_001086806.1\|2796458_2797064_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	8.3e-117	98.5
WP_000268275.1\|2797056_2797965_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	3.2e-157	98.3
WP_000177401.1\|2797951_2798311_-	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	1.4e-58	98.3
WP_000993746.1\|2798307_2798886_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	8.8e-108	99.0
WP_001099507.1\|2798965_2800411_+	hypothetical protein	NA	NA	NA	NA
WP_000343945.1\|2800422_2800872_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-65	89.1
WP_001039963.1\|2800864_2801296_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	5.6e-75	98.6
WP_024132357.1\|2801391_2801820_-	hypothetical protein	A0A1S6KZX8	Salmonella_phage	8.6e-68	98.6
WP_000731036.1\|2801816_2802194_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	8.1e-62	100.0
WP_001069919.1\|2802198_2802708_-	lysozyme	A0A1S6KZY9	Salmonella_phage	2.2e-94	98.8
WP_000171565.1\|2802688_2802904_-	hypothetical protein	E5G6N0	Salmonella_phage	5.9e-33	100.0
WP_000868193.1\|2802907_2803111_-\|tail	tail protein X	E5G6M9	Salmonella_phage	1.9e-33	98.5
WP_000673523.1\|2803110_2803575_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	6.4e-77	89.6
WP_000059168.1\|2803668_2804319_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	2.4e-114	99.5
WP_000730758.1\|2804322_2805384_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	6.0e-195	99.7
WP_000216226.1\|2805400_2806234_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	1.3e-120	84.5
WP_001098457.1\|2806376_2808143_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	98.0
WP_000520367.1\|2808142_2809171_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	4.9e-178	92.9
WP_000059520.1\|2809217_2810882_-	hypothetical protein	X2KLG0	Campylobacter_phage	4.5e-11	24.9
WP_000698373.1\|2811120_2811498_-	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	3.4e-28	50.0
WP_014344394.1\|2811475_2812585_-	hypothetical protein	Q6SE88	Lactobacillus_prophage	2.9e-67	38.9
WP_001217560.1\|2812690_2812924_-	DinI family protein	A0A1S6L014	Salmonella_phage	1.2e-31	89.6
WP_001154443.1\|2812935_2813124_-	hypothetical protein	A0A1S6L006	Salmonella_phage	6.1e-26	98.4
WP_000301162.1\|2813447_2815691_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	96.1
WP_000104120.1\|2815681_2816539_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.7e-129	80.4
WP_000785509.1\|2816535_2816763_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	1.3e-35	93.3
WP_001244234.1\|2816762_2816996_-	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	2.0e-26	84.4
WP_000963195.1\|2817063_2817405_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.2e-49	85.0
WP_000166366.1\|2817624_2818083_+	hypothetical protein	NA	NA	NA	NA
WP_000957776.1\|2818030_2818264_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	4.7e-12	59.1
WP_000460862.1\|2818271_2818781_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	5.1e-83	92.9
WP_000102104.1\|2818816_2819056_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	8.8e-38	98.7
WP_000052560.1\|2819172_2819805_+	helix-turn-helix domain-containing protein	A0A1S6KZZ7	Salmonella_phage	1.4e-66	58.6
WP_001536726.1\|2819808_2820834_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	9.9e-203	100.0
WP_001650427.1\|2821163_2821745_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B5FPC6	Escherichia_phage	1.5e-51	55.8
2827734:2827750	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4337546 : 4384590

Burkholderia_phage(40.91%)

tRNA,holin,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000587738.1\|4337546_4338275_-	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3
WP_000084338.1\|4339012_4339468_-	hypothetical protein	NA	NA	NA	NA
WP_023785434.1\|4339464_4340070_-	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_001747515.1\|4340074_4341820_-\|tail	tail fiber protein	A0A0M3ULF6	Salmonella_phage	1.2e-51	51.7
WP_000359502.1\|4341822_4342455_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.1e-23	56.4
WP_000951740.1\|4342447_4343563_-\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	2.9e-99	51.2
WP_001093501.1\|4343553_4343913_-	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_000632050.1\|4344076_4345624_-	hypothetical protein	B9UDL6	Salmonella_phage	2.5e-48	29.9
WP_000703629.1\|4345623_4346553_-	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	7.9e-151	84.1
WP_000593184.1\|4346549_4346912_-	GtrA family protein	U5P0S6	Shigella_phage	9.6e-44	70.8
WP_000679392.1\|4347239_4347962_-\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_000818151.1\|4347971_4349015_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	8.5e-77	45.3
WP_001269716.1\|4349002_4349212_-\|tail	tail protein X	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000271418.1\|4349211_4350165_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	3.9e-36	50.8
WP_001262488.1\|4350164_4352519_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	3.1e-66	30.6
WP_001185654.1\|4352615_4352744_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001003644.1\|4352703_4353021_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000907494.1\|4353072_4353597_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_000729845.1\|4353596_4355024_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	2.8e-195	71.6
WP_000875314.1\|4355013_4355211_-	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000449437.1\|4355207_4355663_-	Gp37 family protein	NA	NA	NA	NA
WP_000777266.1\|4355821_4356136_-	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_001270445.1\|4356148_4356754_-	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	5.9e-62	61.0
WP_001226439.1\|4356756_4357044_-\|holin	putative holin	Q6QIC8	Burkholderia_phage	3.0e-16	48.1
WP_000615248.1\|4357620_4357968_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_000136394.1\|4358098_4359448_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000790027.1\|4359792_4361442_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_023165043.1\|4361885_4362128_+	hypothetical protein	NA	NA	NA	NA
WP_125469230.1\|4362161_4362830_+	YjbF family lipoprotein	NA	NA	NA	NA
WP_000977889.1\|4362826_4363564_+	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_000750800.1\|4363563_4365660_+	YjbH domain-containing protein	NA	NA	NA	NA
WP_000982752.1\|4365802_4366213_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_001252085.1\|4366378_4367269_-	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000382563.1\|4367283_4368828_-	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_000695420.1\|4368959_4370150_-	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000179176.1\|4370511_4371621_+	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_000973644.1\|4371709_4373068_+	maltoporin	NA	NA	NA	NA
WP_000782497.1\|4373231_4374149_+	maltose operon protein MalM	NA	NA	NA	NA
WP_000019230.1\|4374329_4374827_+	chorismate lyase	NA	NA	NA	NA
WP_000455249.1\|4374840_4375713_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000017360.1\|4375811_4378232_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000002900.1\|4378402_4378771_+	diacylglycerol kinase	NA	NA	NA	NA
WP_000646079.1\|4378879_4379488_+	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_001128112.1\|4379666_4380992_+	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_001575282.1\|4380988_4381102_+	hypothetical protein	NA	NA	NA	NA
WP_001030592.1\|4381123_4381333_+	CsbD family protein	NA	NA	NA	NA
WP_000416271.1\|4381431_4381947_-	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001039322.1\|4382193_4383504_+	conjugal transfer protein TraF	NA	NA	NA	NA
WP_001182229.1\|4383591_4384590_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA

DBSCAN-SWA_7

4635215 : 4679596

Enterobacteria_phage(25.0%)

integrase,transposase,tail,tRNA

attL 4661013:4661028|attR 4677560:4677575

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000252549.1\|4635215_4635662_-\|transposase	transposase	NA	NA	NA	NA
WP_000047544.1\|4635736_4636123_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA
WP_000148570.1\|4636199_4636661_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
WP_000013055.1\|4636673_4637609_-	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	6.5e-52	39.2
WP_000249504.1\|4637644_4637746_-	pyr operon leader peptide	NA	NA	NA	NA
WP_001518160.1\|4637725_4637866_+	hypothetical protein	NA	NA	NA	NA
WP_000666051.1\|4637835_4638324_-	arginine repressor	NA	NA	NA	NA
WP_000514438.1\|4638510_4639914_-	YfcC family protein	NA	NA	NA	NA
WP_000237031.1\|4639969_4640974_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_000428749.1\|4641085_4642018_-	carbamate kinase	NA	NA	NA	NA
WP_000410847.1\|4642028_4643249_-	arginine deiminase	NA	NA	NA	NA
WP_000583453.1\|4643924_4644377_+	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA
WP_000103041.1\|4644450_4645455_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_000002940.1\|4645620_4646037_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_000218447.1\|4646048_4646861_+\|tRNA	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE	NA	NA	NA	NA
WP_000826193.1\|4647105_4647594_-	DUF3617 domain-containing protein	NA	NA	NA	NA
WP_001747736.1\|4647701_4648205_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001066989.1\|4648399_4649587_+	DUF898 domain-containing protein	NA	NA	NA	NA
WP_000416337.1\|4649728_4652584_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	9.3e-142	37.4
WP_001523689.1\|4652583_4653027_-	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_000397158.1\|4653163_4654675_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	8.3e-49	38.7
WP_000584132.1\|4655068_4656169_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_001182242.1\|4656168_4657251_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_001244060.1\|4657446_4658445_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001128356.1\|4658508_4659828_-	gnt-II system L-idonate transporter	NA	NA	NA	NA
WP_000998688.1\|4659889_4660654_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
WP_000453362.1\|4660678_4661710_-	L-idonate 5-dehydrogenase	NA	NA	NA	NA
4661013:4661028	attL	NA	NA	NA	NA
WP_000896759.1\|4661926_4662457_+	gluconokinase	NA	NA	NA	NA
WP_000152567.1\|4662484_4663504_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L7I1	Tupanvirus	3.9e-42	30.5
WP_000772651.1\|4663975_4665238_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.8e-66	35.6
WP_001066528.1\|4665268_4665907_+	hypothetical protein	NA	NA	NA	NA
WP_000455466.1\|4666277_4666508_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_000190567.1\|4666604_4666790_-	hypothetical protein	NA	NA	NA	NA
WP_001118612.1\|4666977_4667154_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	4.2e-05	55.6
WP_001247004.1\|4667146_4667506_+	hypothetical protein	NA	NA	NA	NA
WP_001027149.1\|4667537_4667822_+	hypothetical protein	NA	NA	NA	NA
WP_001075576.1\|4667818_4668202_+	DUF5375 family protein	NA	NA	NA	NA
WP_000211874.1\|4668198_4670871_+	TOPRIM and DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	2.1e-58	34.4
WP_001066192.1\|4671271_4672033_+	septation initiation protein	NA	NA	NA	NA
WP_001185338.1\|4672032_4672305_+	ogr/Delta-like zinc finger family protein	A0A2I8TV89	Erwinia_phage	6.3e-08	46.9
WP_001292737.1\|4672681_4672993_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	2.4e-27	66.0
WP_001747644.1\|4673007_4673127_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_001280979.1\|4673119_4675753_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.8e-106	31.3
WP_096323101.1\|4676858_4676978_+	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_000254751.1\|4677054_4677303_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_000016244.1\|4677411_4677651_+	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA
4677560:4677575	attR	NA	NA	NA	NA
WP_001199743.1\|4677653_4677962_+	CcdB family protein	NA	NA	NA	NA
WP_096322988.1\|4678341_4679596_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-18	34.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_011149

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection