Overview of predicted results
Overview of the results
| Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
|---|---|---|---|---|---|---|---|
| NC_012439 | Persephonella marina EX-H1 plasmid unnamed, complete sequence | 0 crisprs | cas4 | 0 | 0 | 0 | 0 |
| NC_012440 | Persephonella marina EX-H1, complete sequence | 5 crisprs | cas3,DEDDh,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2 | 0 | 5 | 1 | 0 |
1. NC_012440
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0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_012440_1 | 120836-121244 | Orphan |
NA
Consensus repeat of NC_012440_1
|
5 spacers
spacers of NC_012440_1
>1.1|120873|36|NC_012440|PILER-CR TTTCTGTTTTTTGCTTTTCATATATTTCTTTTATTC >1.2|120946|34|NC_012440|PILER-CR ATAGGATCAATCTCAACTACATCTTTTTTAAACA >1.3|121017|42|NC_012440|PILER-CR GGATTATTGACACATCATAAGGGTATCCGTGCCTTGCAAGTT >1.4|120873|38|NC_012440|CRISPRCasFinder TTTCTGTTTTTTGCTTTTCATATATTTCTTTTATTCCT >1.5|120946|36|NC_012440|CRISPRCasFinder ATAGGATCAATCTCAACTACATCTTTTTTAAACACC >1.6|121017|44|NC_012440|CRISPRCasFinder GGATTATTGACACATCATAAGGGTATCCGTGCCTTGCAAGTTCT >1.7|121096|40|NC_012440|CRISPRCasFinder GAACTAAATCTCCGTTTTGCTCAAAATAGTGTGCCATTGC >1.8|121171|39|NC_012440|CRISPRCasFinder TCCTCAAAGTAGCCTATTAATTCTCTTAAAAATTTGCTA >1.9|120873|46|NC_012440|CRT TTTCTGTTTTTTGCTTTTCATATATTTCTTTTATTCCTGTTGAAGT >1.10|120946|44|NC_012440|CRT ATAGGATCAATCTCAACTACATCTTTTTTAAACACCGTTGAAAT >1.11|121017|52|NC_012440|CRT GGATTATTGACACATCATAAGGGTATCCGTGCCTTGCAAGTTCTGTTGAAGT >1.12|121096|48|NC_012440|CRT GAACTAAATCTCCGTTTTGCTCAAAATAGTGTGCCATTGCGTTGAAAC >1.13|121171|47|NC_012440|CRT TCCTCAAAGTAGCCTATTAATTCTCTTAAAAATTTGCTAGTTGAAAC |
CRISPR arrays and Neighbor proteins around NC_012440_1
The CRISPR arrays of NC_012440_1 >merge|NC_012440|1|120836-121244|PILER-CR,CRISPRCasFinder,CRT CTGTTGAAGTTTTCCCGAGATATAAGGGAATTGCGACTTTCTGTTTTTTGCTTTTCATATATTTCTTTTATTCCTGTTGAAGTTTTCCCGAGATATAAGGGAATTGCGACATAGGATCAATCTCAACTACATCTTTTTTAAACACCGTTGAAATTTTCCCGAGATATAAGGGAATTGCGACGGATTATTGACACATCATAAGGGTATCCGTGCCTTGCAAGTTCTGTTGAAGTTTTCCCGAGGAATAAGGGAATTGCGACGAACTAAATCTCCGTTTTGCTCAAAATAGTGTGCCATTGCGTTGAAACTTTCCCGAGAAGTAAGGGAATTGCGACTCCTCAAAGTAGCCTATTAATTCTCTTAAAAATTTGCTAGTTGAAACTTTCCCGAGAAATAAGGGAGTTGTTTT >NC_012440|1|1|120836-121095|PILER-CR CTGTTGAAGTTTTCCCGAGATATAAGGGAATTGCGAC TTTCTGTTTTTTGCTTTTCATATATTTCTTTTATTC CTGTTGAAGTTTTCCCGAGATATAAGGGAATTGCGAC ATAGGATCAATCTCAACTACATCTTTTTTAAACA CCGTTGAAATTTTCCCGAGATATAAGGGAATTGCGAC GGATTATTGACACATCATAAGGGTATCCGTGCCTTGCAAGTT CTGTTGAAGTTTTCCCGAGGAATAAGGGAATTGCGAC >NC_012440|1|1|120838-121244|CRISPRCasFinder GTTGAAGTTTTCCCGAGATATAAGGGAATTGCGAC TTTCTGTTTTTTGCTTTTCATATATTTCTTTTATTCCT GTTGAAGTTTTCCCGAGATATAAGGGAATTGCGAC ATAGGATCAATCTCAACTACATCTTTTTTAAACACC GTTGAAATTTTCCCGAGATATAAGGGAATTGCGAC GGATTATTGACACATCATAAGGGTATCCGTGCCTTGCAAGTTCT GTTGAAGTTTTCCCGAGGAATAAGGGAATTGCGAC GAACTAAATCTCCGTTTTGCTCAAAATAGTGTGCCATTGC GTTGAAACTTTCCCGAGAAGTAAGGGAATTGCGAC TCCTCAAAGTAGCCTATTAATTCTCTTAAAAATTTGCTA GTTGAAACTTTCCCGAGAAATAAGGGAGTTGTTTT >NC_012440|1|1|120846-121244|CRT TTTCCCGAGATATAAGGGAATTGCGAC TTTCTGTTTTTTGCTTTTCATATATTTCTTTTATTCCTGTTGAAGT TTTCCCGAGATATAAGGGAATTGCGAC ATAGGATCAATCTCAACTACATCTTTTTTAAACACCGTTGAAAT TTTCCCGAGATATAAGGGAATTGCGAC GGATTATTGACACATCATAAGGGTATCCGTGCCTTGCAAGTTCTGTTGAAGT TTTCCCGAGGAATAAGGGAATTGCGAC GAACTAAATCTCCGTTTTGCTCAAAATAGTGTGCCATTGCGTTGAAAC TTTCCCGAGAAGTAAGGGAATTGCGAC TCCTCAAAGTAGCCTATTAATTCTCTTAAAAATTTGCTAGTTGAAAC TTTCCCGAGAAATAAGGGAGTTGTTTT
>NC_012440.1|WP_012675665.1|119871_120474_+|peroxiredoxin MSEVILVGQEVPDFEMETYEPETGKFGTFSLKKAKDEGKWTILFFYPADFTFVCPTELADLAEVYPKLKELGAEVVSVSTDTKFVHLAWHRDEKLLENVKYPMGADPTGKISRMFGVYDEATGLALRGTFIISPEGKLVGSEVNFYNVGRNADELLRKMEANAYLIGHPDEACPAKWEPGKKTLKPSEELVGHVYEALNE >NC_012440.1|WP_012676272.1|118089_119790_+|single-stranded-DNA-specific-exonuclease-RecJ MDSGLTGYKWVVLEEKNKAPEDLLKKFGKVIGQLLYNRKEIFNNNFEEENIYPTLKKLLDPQLFNKLDRISYELAKIIKDKKRIVIYGDYDADGITSTALLVNFFKDINADVRYYIPSRFYEGYGLNRSAIKKISQMADVLIVVDSGTNAYEELLYAKKLGLKVFVLDHHEAKEEIIDDEQIYILNPKLHDDIDVLFKHLASVGITFYVIIMLRRLLNLEVKLKPYLDIVALGTVADVVPLSLINRILVQKGIEEINKRRRTGIKALLDYLSIDKVTSFDVGFVLAPRLNAAGRLDDAKKAVKLLTTKNENKGRQLSIELEVLNKKRQKLTELAFKESQVKLKKEKEIKSIVVADENWHPGIVGIVAGRLAHQYKVPAVVLSVKNGTAIGSVRSTGNINIYKVMEENADLFDRFGGHTLAAGLTMPSKNIERFKEILIDYVSSLKEEDKISFIEVDMEVPLSHWTPENVKKLKILEPFGEGNPYPKFIARNLRIDDFITVGAGNQHLKFWFKDNDGKAYPALWWGSVGFFKKLSVGMNVDIIYTPKLSTWNGDLGVEFIVEDIKIN >NC_012440.1|WP_012675671.1|117558_117990_-|hypothetical-protein MGKIVKFGQVQETEQSKDLVEESSKEIKTIFSKKPLYQKIWEGLEDYILHNFAVKNVLGMDFTYKENNLKEIGVLGILAYEHKRRNGTFVADFVGRGYIDTKKDKVIIDLVVFKAGERELYNSTIKILKAKKIYPELTFNEGE >NC_012440.1|WP_187146673.1|116413_117562_-|nitronate-monooxygenase MKMSLPPLRIGQYEIQYPIIQGGMGVGISWENLAGTVSKYGGLGVVSSVGTGYRHPNYIKLKDGRPIGSKYIHNREALQRIIRDAKEIAGGEKAVIGVNILYAITDYGRVVRDSIEAGANIIITGAGLPLRLPEYAPEPHVALVPIVSSARALRVICKHWKKKYNRLPDAVVVEGPKSGGHQGIPYEDCFKPEFQLENIVPEVIKERDKWGDFPVIAAGGIWDKNDIEFYLSLGAAGVQMGTRFVGTFECDAAPEFKRVIIESKKEDIKLIKSPVGYPARGIITQLIKDIERGTAPEVKCTSNCVVPCNHGEEAKKVGFCIADRLGDAYLGRVQTGLFFSGSNGYRIKRLVSVKDLMRELVEGIPSGQEIPEGEPVESGKQL >NC_012440.1|WP_015898897.1|115519_116338_-|molybdopterin-synthase-adenylyltransferase-MoeB MSFQFTEEQIKRYSRHIILPEVGGKGQQKLLDAKVLVIGAGGLGSPSLYYLAAAGVGTIGIVDFDVVDFSNLQRQILHSTERVGKPKVESAKMTLEALNPDVKVIAYNERIHKGNVIDIIKDYDVVLDGSDNFPTRFLINDACFFLGKPLVSAAILRFEGQLTTFDYRNKDESPCYRCLFPEPPPPGLVPSCQEAGLLGVVGGIMGTLQANEALKLILDIGEPLIGKLLVFDALTTEFNVVKLRKDKKCPLCGEKPVIKELIEYEQACDVHF >NC_012440.1|WP_012676153.1|115266_115509_-|sulfurtransferase-TusA-family-protein MEEVKVDRELDLRGEVCPFTFVKSKLIIEQMEPGQVLKVILDYKPSVENVPKSMREEGQEVLEVKQIDKNLWEVIVRKVR >NC_012440.1|WP_041530850.1|114967_115270_-|DsrE-family-protein MNLLIIMASNPYSHDFNTAIKLAEASLNRNHTTKMFFMGNGLFSILRDEIKNLNEKGLKVYYCAHNAEQRKVKPESWAESSSMYGLAKLITEADKVIMLS >NC_012440.1|WP_012675870.1|114607_114958_-|DsrE-family-protein MAKKNLIFVIKSNPFSWKAFEALRQAVGCSMEHKVTVIFLKDGIYTLTDWKPQMIGIDPIDKSIDALGMMDATIVVEEEALRERGVKLKEWSTPVHIRSKDEICEIIKESEVVITW >NC_012440.1|WP_012675503.1|114371_114614_-|sulfurtransferase-TusB MVNTVWLIKRPADFPEADMLEKEDMIILIQDAVIRVPIIENWAACREDAVARNIKIPEDKLLNYEDIIDIIEKAEKVIVW >NC_012440.1|WP_012675802.1|113408_114368_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA MKKIGITLGDPSGISPEILIKSIDKLKKAIYVIYGSYKIIEKVSSILDKKTEINIIDSPEEAEKEGVYLINVYDRDFCVGKPDKETGKASVLFLERAVKDILSKKLDAIVTLPISKEYVMKAGFRYAGHTDYLADITKTEDYLMMLLCEKMKVALVTTHIPLKDVPENIKPEILESKIRLLNRELQSKFGIKKPKIAVLGLNPHAGDGGNIGREEIDIINPVVQKLKSEGIDLEGSLSADTAFNRYREFDAYLAMYHDQGLIPLKLLCFKKAVNITLGIPFIRTSPDHGTGFDIAGKGIADPSSFIEAVKLALKLSKQY >NC_012440.1|WP_012676551.1|121420_121636_+|hypothetical-protein MGDIERVWISGDKVFSVKTLEQFSVNLSAGRKHIKVSDDKMLSILHDLEKFEIALYYEGKVDKYVVERIKL >NC_012440.1|WP_012675899.1|121682_121883_+|30S-ribosomal-protein-S21 MAVVVVQEGESFEKALKRFKKICEKEGIITEMKRREFYEKPSVKRKRKQRAARKRLIKALKKKGLL >NC_012440.1|WP_012676812.1|121893_122340_+|GatB/YqeY-domain-containing-protein MAELLKKLQDEMKAAMKSGDKEKLSTIRMLISEIKKVQIDQKKELSDDEIIAVIQRYAKQRKESIKQYREAGREDLAQKEEKELQIVQQFLPQPLTEEEIEKIVEETIKELNASSMKDMGKVMKAVMEKVKGRAEGAVVSSIVKSKLS >NC_012440.1|WP_012676162.1|122342_122777_+|CvpA-family-protein MLDIILLLFFIYLVIAGLFNGFTQIFIKGLGFLTAGYLGFSFTKDLSAYLSRYFNAEKVILDFVAFALIFILVFSVFLLINSIVKKELKSRKKLSIMDKLTGAIAGILIFVICVYMIKEFSKKNETLRELSSKSRIVKLFSWER >NC_012440.1|WP_012676186.1|122764_123166_+|hypothetical-protein MGKIKNPKIFYKNLFLFGIFFVAIFLMIRGYLLLYTDDLDVAQKVIKIGKAEIETVTGKKFETQIKGLKKNDDEIYIISDEGQIPLKDILYIDGKNINQKIIKNLSDRAIKGIFYVVSGGFIFLFLILIRNYI >NC_012440.1|WP_012675329.1|123162_123642_-|DsrE/DsrF/DrsH-like-family-protein MATRVGIIVLSGTLDKVMPAFILGTTAAAMGMEVGMFFSFYGINVVHKEKYKNLKVSPVGNPAMPMPMPVPQILTIMPGMVDFATNMMKKMMAENKVPSVEELIKQAQDLGVKMYPCQTAMQLFGYKVEDLIDGLEKPAGAATFLNFVNAGEKSIVMNF >NC_012440.1|WP_041530965.1|123678_124998_-|RIP-metalloprotease-RseP MSVIAFLIMIGILITIHEFGHFLFARLFGVKVEVFSIGFGPPLIKWKGKETLYQIAVIPLGGYVKMYGEDSMTEPVQGEVDKAAFEDPRSFYAKPRWQKILIAFAGPLFNIVLAVILFASAYMIGIHEPKYLKEPVVVGYVHPGSVAEKVGIKPYDRIVAVDGKPIKNWKEFTIAIGMKAAKSAVIEIDRNGEKIVLNIQVPHDITKEPLGISPVIPAKIGQVMKGSPAEKAGLQKGDEIIAFNGKPVRSWFELVDTLSTIKEKKEITLLVRRDGKVFPVKVTPEFNKELNKYVLGISPKMDTTIVKYGFTESFEKAIEKSKELTVAIYNVIKGLITGEVSLKTLGGPIAIAQFSGQALETGLAAFLFSIAFISLQLGYLNLLPIPVLDGGLIAILLIEMIIRRPLPEKAKEYLAYIGFALLGTLMIFVIFNDIMRALS >NC_012440.1|WP_012676935.1|125012_126134_-|1-deoxy-D-xylulose-5-phosphate-reductoisomerase MKRLAVLGSTGSIGTQTLDIVRKYRDRLEVSLLAASRVSEKLLDQIDEFKPEYVYIAEGEKIKGVKTLIGEDGLYKLAQLDIDLFINGISGINGILPTYLLLENNKKLATANKEAIICLGEIYGDKYSDIFPIDSEHSAIFQCLLSGRKEEVEKIILTASGGPFLNLPKEEFRYITPDQALNHPRWKMGKKVSIDSATLMNKGFEIIEAHYLFNIPYSKIDVVIHPESIVHGLVQFIDGSVISHLSPPDMRIPICYAISYPERWEIDVRRLNLAQVKNLTFLEPDYDRFPLLNIAKECGEKGGACPTVLTTADEIAVNLFLEGKITFDMIPVYIQQVLDQADFSKPETFEDIIFIIKETEKIFWNILKLQNVN >NC_012440.1|WP_012675539.1|126144_126750_-|thioredoxin-family-protein MFPEGADTFLKKRFNELIDPVKLILRKSGKDIDRDIEKVLESISTFSEKISIEINESLSCIDAPCISIQTTEKDFGIRFMGKPDGGEFKTFIDTIVMVSRNEYDLSERTVELIEQIDRPVEIKVFITNTCGWCPPAVLKSYSFAMVNEYITATAIDCYIFSDLAVKYNVATVPKIVINDKVEQIGLKDENQLLGSIFASIS >NC_012440.1|WP_012675877.1|126833_127535_-|NADH-quinone-oxidoreductase-subunit-I MGIKKVGMNVNVQPQSIVEKIFFLDFAKGLATTIKHLFRKVITVDFPYEVVVPAPRFRGVHGLRNVDGTELPDFDAWVKKLKIKPPEMGETRCIGCKFCQAACPVPEIFTIKTEKLDVPEDHPHHGLKVVSQFDMDLGKCMFCGLCTLACPTACIIHTDIYDLSSYTRRGWVLDKEKLSKIADDFVSRRREEKFDEHSFWPDTQKIFPEYDKARAKAWDNNPPKLGPNYADQQ |
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| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_012440_2 | 1254083-1254830 | Unclear |
NA
Consensus repeat of NC_012440_2
|
11 spacers
spacers of NC_012440_2
>2.1|1254112|40|NC_012440|CRISPRCasFinder,CRT TGGCTTTGTTCTTCGTCCTGATGTTCCTAAGGACTTGCAG >2.2|1254181|36|NC_012440|CRISPRCasFinder,CRT,PILER-CR AATCAGTCTATAGCAACTTCACCTTTACCTTAAAGG >2.3|1254246|37|NC_012440|CRISPRCasFinder,CRT,PILER-CR TTCATCTATGGGGAGCAAAGAAAAAACAGAGACTCTT >2.4|1254312|38|NC_012440|CRISPRCasFinder,CRT,PILER-CR GAAGACAAAGAAGGAGTTAGATATTTCATCTCAGCTGG >2.5|1254379|36|NC_012440|CRISPRCasFinder,CRT,PILER-CR CATTGTATTAACATTCAAGAGATTTGTCAATAGGTA >2.6|1254444|36|NC_012440|CRISPRCasFinder,CRT,PILER-CR TTCAACATTGCTTTCTATTTGGAATGACAAATACGG >2.7|1254509|36|NC_012440|CRISPRCasFinder,CRT,PILER-CR CCCTCAACACCTTTAGCTTTCAGTTCGTCTATTTTT >2.8|1254574|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR AAGTTACAGGGAATGTTCCTCTGGTTCTTAGAGG >2.9|1254637|35|NC_012440|CRISPRCasFinder,CRT,PILER-CR AGGACTGGTTACCTGTCTTTTTTCTTATTTTTTTG >2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR CTCCATTTTCTTTTCCTCCTTTTTTGTTTGATCG >2.11|1254764|38|NC_012440|CRISPRCasFinder,CRT,PILER-CR TGAGCAGGCAAATATGCTGATAGCTGTTTTCGTTGATA |
cas6,cas8b2,cas7,cas5,cas3,cas4 |
CRISPR arrays and Neighbor proteins around NC_012440_2
The CRISPR arrays of NC_012440_2 >merge|NC_012440|2|1254083-1254830|CRISPRCasFinder,CRT,PILER-CR TTTTATCTTCCACTTAGTTCAAAGAAAACTGGCTTTGTTCTTCGTCCTGATGTTCCTAAGGACTTGCAGCTTTCTATCCCACTTAGTTCAAAGAAAACAATCAGTCTATAGCAACTTCACCTTTACCTTAAAGGCTTTCTATCCCACTTAGTTCAAAGAAAACTTCATCTATGGGGAGCAAAGAAAAAACAGAGACTCTTCTTTCTATCCCACTTAGTTCAAAGAAAACGAAGACAAAGAAGGAGTTAGATATTTCATCTCAGCTGGCTTTCTATCCCACTTAGTTCAAAGAAAACCATTGTATTAACATTCAAGAGATTTGTCAATAGGTACTTTCTATCCCACTTAGTTCAAAGAAAACTTCAACATTGCTTTCTATTTGGAATGACAAATACGGCTTTCTATCCCACTTAGTTCAAAGAAAACCCCTCAACACCTTTAGCTTTCAGTTCGTCTATTTTTCTTTCTATCCCACTTAGTTCAAAGAAAACAAGTTACAGGGAATGTTCCTCTGGTTCTTAGAGGCTTTCTATCCCACTTAGTTCAAAGAAAACAGGACTGGTTACCTGTCTTTTTTCTTATTTTTTTGCTTTCTATCCCACTTAGTTCAAAGAAAACCTCCATTTTCTTTTCCTCCTTTTTTGTTTGATCGCTTTCTATCCCACTTAGTTCAAAGAAAACTGAGCAGGCAAATATGCTGATAGCTGTTTTCGTTGATACTTTCTATCCCACTTAGTTCAAAGAAAAC >NC_012440|2|2|1254083-1254830|CRISPRCasFinder TTTTATCTTCCACTTAGTTCAAAGAAAAC TGGCTTTGTTCTTCGTCCTGATGTTCCTAAGGACTTGCAG CTTTCTATCCCACTTAGTTCAAAGAAAAC AATCAGTCTATAGCAACTTCACCTTTACCTTAAAGG CTTTCTATCCCACTTAGTTCAAAGAAAAC TTCATCTATGGGGAGCAAAGAAAAAACAGAGACTCTT CTTTCTATCCCACTTAGTTCAAAGAAAAC GAAGACAAAGAAGGAGTTAGATATTTCATCTCAGCTGG CTTTCTATCCCACTTAGTTCAAAGAAAAC CATTGTATTAACATTCAAGAGATTTGTCAATAGGTA CTTTCTATCCCACTTAGTTCAAAGAAAAC TTCAACATTGCTTTCTATTTGGAATGACAAATACGG CTTTCTATCCCACTTAGTTCAAAGAAAAC CCCTCAACACCTTTAGCTTTCAGTTCGTCTATTTTT CTTTCTATCCCACTTAGTTCAAAGAAAAC AAGTTACAGGGAATGTTCCTCTGGTTCTTAGAGG CTTTCTATCCCACTTAGTTCAAAGAAAAC AGGACTGGTTACCTGTCTTTTTTCTTATTTTTTTG CTTTCTATCCCACTTAGTTCAAAGAAAAC CTCCATTTTCTTTTCCTCCTTTTTTGTTTGATCG CTTTCTATCCCACTTAGTTCAAAGAAAAC TGAGCAGGCAAATATGCTGATAGCTGTTTTCGTTGATA CTTTCTATCCCACTTAGTTCAAAGAAAAC >NC_012440|2|2|1254083-1254830|CRT TTTTATCTTCCACTTAGTTCAAAGAAAAC TGGCTTTGTTCTTCGTCCTGATGTTCCTAAGGACTTGCAG CTTTCTATCCCACTTAGTTCAAAGAAAAC AATCAGTCTATAGCAACTTCACCTTTACCTTAAAGG CTTTCTATCCCACTTAGTTCAAAGAAAAC TTCATCTATGGGGAGCAAAGAAAAAACAGAGACTCTT CTTTCTATCCCACTTAGTTCAAAGAAAAC GAAGACAAAGAAGGAGTTAGATATTTCATCTCAGCTGG CTTTCTATCCCACTTAGTTCAAAGAAAAC CATTGTATTAACATTCAAGAGATTTGTCAATAGGTA CTTTCTATCCCACTTAGTTCAAAGAAAAC TTCAACATTGCTTTCTATTTGGAATGACAAATACGG CTTTCTATCCCACTTAGTTCAAAGAAAAC CCCTCAACACCTTTAGCTTTCAGTTCGTCTATTTTT CTTTCTATCCCACTTAGTTCAAAGAAAAC AAGTTACAGGGAATGTTCCTCTGGTTCTTAGAGG CTTTCTATCCCACTTAGTTCAAAGAAAAC AGGACTGGTTACCTGTCTTTTTTCTTATTTTTTTG CTTTCTATCCCACTTAGTTCAAAGAAAAC CTCCATTTTCTTTTCCTCCTTTTTTGTTTGATCG CTTTCTATCCCACTTAGTTCAAAGAAAAC TGAGCAGGCAAATATGCTGATAGCTGTTTTCGTTGATA CTTTCTATCCCACTTAGTTCAAAGAAAAC >NC_012440|2|2|1254152-1254830|PILER-CR CTTTCTATCCCACTTAGTTCAAAGAAAAC AATCAGTCTATAGCAACTTCACCTTTACCTTAAAGG CTTTCTATCCCACTTAGTTCAAAGAAAAC TTCATCTATGGGGAGCAAAGAAAAAACAGAGACTCTT CTTTCTATCCCACTTAGTTCAAAGAAAAC GAAGACAAAGAAGGAGTTAGATATTTCATCTCAGCTGG CTTTCTATCCCACTTAGTTCAAAGAAAAC CATTGTATTAACATTCAAGAGATTTGTCAATAGGTA CTTTCTATCCCACTTAGTTCAAAGAAAAC TTCAACATTGCTTTCTATTTGGAATGACAAATACGG CTTTCTATCCCACTTAGTTCAAAGAAAAC CCCTCAACACCTTTAGCTTTCAGTTCGTCTATTTTT CTTTCTATCCCACTTAGTTCAAAGAAAAC AAGTTACAGGGAATGTTCCTCTGGTTCTTAGAGG CTTTCTATCCCACTTAGTTCAAAGAAAAC AGGACTGGTTACCTGTCTTTTTTCTTATTTTTTTG CTTTCTATCCCACTTAGTTCAAAGAAAAC CTCCATTTTCTTTTCCTCCTTTTTTGTTTGATCG CTTTCTATCCCACTTAGTTCAAAGAAAAC TGAGCAGGCAAATATGCTGATAGCTGTTTTCGTTGATA CTTTCTATCCCACTTAGTTCAAAGAAAAC
>NC_012440.1|WP_012675462.1|1251247_1254013_+|excinuclease-ABC-subunit-UvrA MDRIVIHGARQHNLKNIDLEIPKNKLIVITGPSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGLMEKPDVDSIDGLSPAIAIDQKTTSKNPRSTVGTVTEIYDYLRLLFARVGKPHCPECNSIIASQSAEEISEQILKFPEGSKIQILAPVIRGKKGEHKDIFEKINRMGFPRVRVDGDIYLVEEVPKLEKNKKHTIEIVIDRIVIKEGIRTRLNDSIEQALKLGDGIVVVNNLSEGKDHIFSEKFACPQHGFSIAELSPRLFSFNSPYGACPECKGLGIIHKIDIDTLIDYNRAVIESFRITDSFYFKYVKGIIYDIIYYHGINKFTKFKDLPEDVKDELILEIVPHLERKYLETDNEKQRAELEKFIREVRCPVCKGSRLKKEALYVLINGRSIWDVVRMNILESYRFFEDFEKSPMSEKDRVIGEKIIKEIKERLKFLIDVGLDYLTLERSATTLSGGEAQRIRLATQIGSKLSGVLYVLDEPSIGLHPRDTAKLINTLKELRDLDNTVIVVEHDPETIEEADVIVDMGPGSGVYGGEIVAVGTPEEIMENPHSLTGKYLSGKLKIPVPKERRKPDPDRKLVIKGAKEHNLKNIDVEIPLGLFVAVTGVSGSGKSTLIYDILWQAAKNRFHHRNDYVGDHDTIEGWEHIDKVINVDQSPIGRTPRSNPATYTKVFDQIRALFAATPEAKIRGYTPGRFSFNVKGGRCEACKGDGVVKIEMHFLPDVYVTCEVCQGKRYNRETLSVLYKGKNISDILDMTVAEALEFFENVPSIRNKLKVLNDVGLDYIKLGQPATTLSGGEAQRIKLTRELSKRDTGKTLYFLDEPTTGLHSHDVEKLIRVLNKLVDKGNTVVVIEHNLDIIKNADWIIDLGPEGGDRGGQIVAVGTPEEIMENPNSYTGQFLKKYLQDERLTSV >NC_012440.1|WP_012676861.1|1250251_1251181_+|hypothetical-protein MHFYIFILFFSIFSYVKAFENINFIFDFSYVGRDKDIYSVDDEHSDFMMNKDKGFNLNYGELSISYPVEKGIKLKGVFHLTEESFEIGELYFFTGDTFRLKGGKFRSSVGILNERHQHEWEFSDIPVFYQSFFGYHALTEKGIQVSYHHKYIISGFEILQGENEYSFGKGKGDLFTFFVKGNLPYIKPVFSYLDGGFREDQSSGRTRMIFTGAEISSFKNVRFQGEYAYRIKEGDKSSGYYIQMVYSAEKAVETGLRYGYVENGEYRYSGMITFRFSEYIKLRAQYNYYRSQINEFILELTFKTGEDEH >NC_012440.1|WP_012676148.1|1249940_1250210_+|hypothetical-protein MYLKKLLLILLVVFSVGYSAVHHHQDGRVHLDCPVCLFQINNLSDGSVESFEAVILQFPSDIYFPENQVLYLQRIVSYIYQRAPPLSDL >NC_012440.1|WP_012676973.1|1248554_1249940_+|oxygen-independent-coproporphyrinogen-III-oxidase MAFHPQDVKFDLDLIMKYAKPAPRYTSYPTAQEFTPEITEKQWREKVIQSNKRKTPLSLYFHIPFCESACHFCGCNVIITRRKEVVQPYLEHLFKEMDIMCSLLDRSRKVVQLHWGGGTPNYLEDDQTVKLMEEIKKRFDFDENAEMSIEVDPRHVTKERIFLLRKIGFNRISFGIQDFNPKVQEAVNRIQPEELIFNVMSWIREAGFESVNIDLIYGLPYQTLETFTETVEKVIKLNPDRIANFNFAYVPWLKRLQRRIDESKLPPPAEKLEILKMTIEKLTDAGYLFIGMDHFAKPDDELAVAQRERTLHRNFQGYTTHAEAELIGFGATSISMLYDAYAQNHKKLKDYYEMIEEGKLPIERGIILTQDDIIRRDVIMRLMSHFQLYKKEIEEKYGIDFDQYFASEMEELKELEKDGLLKLYPDRIDVTPAGRLLIRNIAVTFDIYTKAKKEKRFSKAI >NC_012440.1|WP_012676911.1|1247844_1248465_+|imidazole-glycerol-phosphate-synthase-subunit-HisH MITVVDYGMGNLRSVAKALEKVGLDVKVSSDPEDVLNSKAIVVPGVGAFGDAMHNLDRLGLLDPVIRSIESGKPYLGICLGLQILFEYGYEFGEHKGLGVLRGKVIRFENREGFKVPHMGWNQVWIKQKDGLFSDIKDGEYYYFVHSFYAVPSEESDIASTTDYITEFCSAVQKGNVWAVQFHPEKSQKAGLKLLENFKGFVEKES >NC_012440.1|WP_049756089.1|1247131_1247848_+|tryptophan-synthase-subunit-alpha MAGYPSLEKSYETAKALIQSGADILEVGVPFSDPVADGPTIQVAHEKAVKDGITPVNVFQLTEKLKKEFPDIPLILMTYYNPIYVMGEQDFCKLAKEKGADGFIVPDLPPEEAENFKRIANSSGLETIFLLAPTSHERRIKLIGEMSDSFIYYVSLTGITGERDTLPWEELENKVRQIKKITGKKVAVGFGVSKKEHTQKLSQISDGVIVGSAVVKLQGKADIEGIKSLVKQLKEGME >NC_012440.1|WP_015898951.1|1246412_1247024_+|YihA-family-ribosome-biogenesis-GTP-binding-protein MSVIKKVQFIKSAVNPKDYPQPKYPEVAVVGRSNVGKSSLINAIFKRNIAKVSSSPGKTRLINFFLLNDRISFVDLPGYGYAAVSKAERAKWKKMIEKYFQTRENLSLVIMLVDSRHPPTKLDIMMKEWLEDLGIPYIVVATKADKLNQSEKARTKKVIRETLGLPKDFPVFLTSAKEGTGIKELMSYVLDFLTEERSHKSVI >NC_012440.1|WP_012675979.1|1245175_1246411_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX MNRINRCSFCGKTQEETKVLVAGPNDIFICDDCITQCNLLIKEELESIEKDTPELKSLPTPAEIKKKLDEYVIGQERAKKILSVAVYNHYKRIFHPGRYTDDDVELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATNITEAGYVGEDVESILVRLVQAADYDIEKAEKGIIYIDEIDKIAKKSGENPSITRDVSGEGVQQALLKILEGTVANIPPQGGRKHPHQEFIQLDTSNILFILGGAFVGLEDIIKQRIGKKSIGFATQIRSKEEEEGNILSKVRVEDLIKFGLIPEFIGRIPVVATLDELDEDALVRVLTEPKNALIKQYKKLLSMDGVELEFTDDAIRAIAKEAIDRKTGARGLRAIVEEIMLDVMYEIPQAQGVKKVVIDKDVVLKKKQPVMIYEKAS >NC_012440.1|WP_012675355.1|1244564_1245173_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP MSKDLDSIVSQLVPIVIEQTPRGERAYDIYSRLLKDRIIMLGFPIDDHIANLIIAQLLFLESEDPEKDIYMYINSPGGVVTSGLAIYDTMRYIKPDVVTICMGQAASMGAFLLSAGAKGKRYALPSSRIMIHQPLGGFQGQATDIEIHAKEILRLKKYLNERLAEHTGQPLEKIERDTERDFFMSAHDAVEYGLIDKVIEKR >NC_012440.1|WP_012676184.1|1243220_1244561_+|trigger-factor MSVTVEEKGLVRTLTIEEKGQEIKSLIDNVVREIAKNVNIPGFRKGHVPPAVIKARYKQAIKEEVARKFISEKLQSILEEQKLSPVSPDITFGDVELSGDSLKMKVAFEVAPEFELKDYEGLEIEMIKHEVSDEDVEKAIQNLLEQHATYKLADKEVEDGDLIKIHYHIKADTGEEEEDEFEVAVGQGQLRPEIEEKIKGKKAGDEVTAENVSLYNEKGEEFGKATVTVRILEVKEKVLPEFNDEFVKSINLGENVEEAKKKIKESLENQIKEAKERELEQKIIDKLAEQYDFEVPQSLVKAELEYLLQEYAKQLETYGIKPNQEMMAAAAEGLKQTAEKNVRVMFVINKIAEKEGIKVEEEEINREIENMAKAYNMTADQLKQYLEEKGLINNIIYSILKKKVLDLIKERANIVEMTKEEYEKKKAEEEKAGTEAEKEAEEKKEE >NC_012440.1|WP_012676602.1|1255187_1255985_+|CRISPR-associated-endoribonuclease-Cas6 MRIKIIIEAEKHPIIYRHRAVSFIKEALKKADIDYKEYLYRGKITKPFCFNIPSPKNVPSQKEEIQIDENFIIEDTVYSLNGSYLSLYVSASDYRFLISLFNGIKRMGAFDFSSDTNMLINGKKISWGIKKVIYLNERPIRSDRIIFKTNSPILVEDINDKPVLFSDKNFEKELNEITDRILRSEHIKGRGLEKPLKFKPLKMNKKVIKHTLKKFREKTGKPIMYLTGNYGIFELSGHPKDLEILYKIGIGNRTGQGFGMVEVVG >NC_012440.1|WP_012675210.1|1255984_1257688_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1 MERVYLGDWLCNAGIIGFLKINHHLWKIEREKLISQDESLLKFGDNYLEFDRKIFEGFSERFFDYAFHQYGRYENLLNLFKEYIEDLQNLDDEENFEKLAKKYFKNKDIKIENLPTLLPVEIFDRFKRILQGFTLLKKKLNKIPSKNDIKKDKNLLIDVLNEAISIMESEREEFWESDVQIYLRNIYGQKSFLNLSVNKDRFEKFYKDFEKPLIESSVKRDKTYKCINCIDRQAKKDTIFDTGISKFYGLNPDSVNFVWNFKPKLPLCEICEIIYFSYFAGLIPVNKNGKTVFYYVNSDTSLESLLKENLLLERKLTKEISENPFIEFFTELVLMSEEERARYTLQNTVIIELDLNNETMPKIYSFNISREKAEFLVNNKENFQKLSKVFYKIKNDSFSVLPEVIEKTLNNSLNFKYLNRLIKLHLKNANDSSYYATNITSYQLQLLNLLTKEFLQKVILGGTDMGIDENNLWSIYYQGIDLAKKLRESNAENKIQSIAYKLLNALRIGDTNQFMDVLIRTYMAYGEEIPSTFVKAISDKNTFYPLGYSFLNGLLGKEKPKEVSNNE >NC_012440.1|WP_012676358.1|1257680_1258613_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR MSNLQPKGLTISIIFDAMSLNYGEGVGNISELKKLSRSGELYSYESRQAIRFDTYRLLKEIFGIDSDKEEPLTGDNDVVQFKPEANVKDYIEADLFGYMKTEKDKGALTRPAVVRINPAISLEPMNLDVEFGTNLNFAQRAGTNPNPFQFEHHSSLYSYTITIELDKVGKDENDEIDIEPEEKARRINMLLDVLKILNRNIKGRMESLNPLFAIGGVYNVKNPFFLGRLKVSYNKENRKYSVKTPIIASILDISFNGEKVKDNTHIGIIEGYWENESDIKELLPDNQVHNINDFFEELKKKVNDYYGIKN >NC_012440.1|WP_015898877.1|1258683_1258932_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin MIITANELKTKGISFVEKILKKYREAYISVRGKPKFVILPIEEYEKLKEAELEKIIKEAEEDYKAGRIIKETAEEHIKRLGI >NC_012440.1|WP_041530902.1|1258932_1259211_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family MYQLVFTETYLRREKDFLKKHKDLIPRYKKVLRLLEINPYHPSLRLHKLKGKFKDKYSVSITMNYRIIITFAVVENEIVLIDIGSHDEIYKG >NC_012440.1|WP_041531102.1|1259227_1259950_+|type-I-B-CRISPR-associated-protein-Cas5 MKILRIKAYQLFANYRKPMSYNYWDSYPLPPLSTIRGWFHYVVWNGNKDENRHYIPISMSIQGKFSSVIQDLQTLIKFDRKRNTKGEIVIEGFNKAFSKSPTYVTNIFDINLHIYIKAEEHFLHRFIENVFKLEYPSIGRYEDLVRIDELKIIEPEPIDLYEEPHDIYYGIYINKKTADYFGLRGINYRMNFKYDGDLLNKTGLRYFERKDIVYVDNAVLGEGEILFDKEENRVIDLVGD >NC_012440.1|WP_012676604.1|1259968_1262218_+|CRISPR-associated-helicase/endonuclease-Cas3 MRKIYAKIYYKDGKPVPETLEEHTENLLIELEKLKNIYGRDIVINEDFWENLKFACLFHDLGKVSDNFQSKLKRIVGEKIPRGVDKEIPHNFLSGIFLYSKSIRKLIPREFFDYIFYAVVFHHDREINFDSNYLKEVVEKDISKKADLLNWLEKYSIVIDRVDPDRSGILFKKIKEFKYSEHEKTKEVKRSKYFILLKGLLHRLDHSASAKVNVEEERIKNPREKLIQKLSKKENFTGLKPFQEKAKDYENENILLTASTGMGKTEFAINWIGESKAFYTLPVRVSVNAMYDRFVNYFGKDKIGLLHSDAVFYGFDKYEKFEDNLSIEEHIIRTQATRQFAMPITITTADQLFTATFKYPGYEKVYATLAYSKIVLDEPQSYSPDTLAIIIKGLQEISELGGKFCFMSATIHPFIRERLKDYCRILDAVFNTEKKHKITLLDNSLEETTEKIKDLYKKGKKVLVILNTVKKSQEIYKLLKDDKTNVKLLHSLFINRDRKEKEDQIKENFKTEQPVIWITTQLVEASLDIDYDVLFTEIATLDALIQRMGRVNRRKGRTIDENSSPNIFIALNNPSDQGKIYNKNIVELTKEALKNYEGEILTEEIKQSLMEEVYNEEKIKSTKFYEKFEKNLELLEYGYQADTKGEAQKLFREVLNINVIPEKILNENYTQIDNLINQILDKSIPYPERLKSIHKLNSFTLGLPIFRIKDQIPTDITPPKMRNKIFSVNFDYNSELGLIIESQQLGEIL >NC_012440.1|WP_012675813.1|1262346_1263135_+|nucleotidyltransferase-domain-containing-protein MQDLIRQKLKNIEKNHNIKILYACESGSRAWGFESPDSDYDIRFIYVEKLDYYLSIEQKRDTIEIIDGELDFVGWELKKALFLLRKSNPSLIEWLNSPRVYLKDEEFYKKIKKLMEKSFNPKSLMYHYFHMAKSNYREYLKGDLVKVKKYFYVLRPIFALNWIQDKKRIPPIEFEILLNGVHISDKVKLEILKLLKEKKNTKELDLRPKIKILNEFIEKNIDYYEKFLKEFDFRTNLPEVYGYNFLLRRMIFKYDTEICNPK >NC_012440.1|WP_015899034.1|1263119_1263632_+|CRISPR-associated-protein-Cas4 MQPEINFEELKVNGIKINYYFICPRKLWLFDRKITMEEKSDRVLMGALLHETSYKRDKTKEVLIDNIISIDILDNLNIREVKYSDRMAEADRMQILYYLYYLKKLGISKKGIINYPKQKRREFVELTPEDERKIEQALMEIDRILKQEKPPPVIDVPYCKKCAYFEFCFG >NC_012440.1|WP_012675939.1|1263635_1265981_-|hypothetical-protein MENKRHKDILIEVLQNLGGEAHLNKIYEEFKKLARKYNVQISKSYKATIRGTLERYSSDSNNFVGKEDIFYLKEKGTGIWGLRDIKEKTINSDLKGSYNQKKIALAGSIGKDDLKSLLSDIETKLKNKDKVSLWWSYPIKHCKEDYEKEKPFWFYFYQDGKLKARCKVVDFITHEGDDGIECPENWEDFILDEGWKGKKKLSERKNEIFKTWLLIDKIEELNEYIPLKDLKSFCNRKINPIALKNGFLYVYDPIINSKKFLENLKLENHQIASFYNALKTKGFVILAGLSGTGKTKIFEDFVKYFPNSKSIKKEKWIVTEDTEEKLVPIKKEQIQFGNGRLKIQDFIESINEKLMSTTNRKVFLKINKYYTELIPVVEELKNRTDLINASEITNHLAVYIGSLFGFEIIEKEDIKKLGLKKLDKKLKIKKFEQNLDNNLFFPVRPDFKDSKSLLGFYNPLKREYHTTPLLDFVLEASKNYLENGKDSDPFFVLFDEMNLARVEYYFADFLSVLEAKKFQNLSEAIGSCSFIEFIKNLGKELNEGNYKFTSQSIKLHNEESSNVPKELFLPPNLYFIGTVNIDETTHMFSPKVLDRAFTIEFDVGCFDEYLNFLKNSSNGIENKGKFTEDLKKDFTNNGNFASINKGKILEFLEKNKKYKDKLEEINQILKPFNLHFGYRVFDEIVMFLYNCQNSLIKFENLDEAFDLALKMKVLPKFHGTRQKLKKPILRFLNFCEIKSPEELIKEGIPDLNSIDSDYKHTAHKLLEMLYKLQTQGFTSFM |
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| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_012440_3 | 1269028-1269447 | Unclear |
NA
Consensus repeat of NC_012440_3
|
6 spacers
spacers of NC_012440_3
>3.1|1269058|35|NC_012440|PILER-CR,CRT TTATGAGCTGGAAATATCTATAAGAAAAATTGAGG >3.2|1269123|34|NC_012440|PILER-CR,CRT CTTTCTGCTCTACATATATTGTTTTTCCTGTGTA >3.3|1269187|36|NC_012440|PILER-CR,CRT CCTTCTTTGCTTGAAAATTGATCAGACGATAAATGA >3.4|1269253|34|NC_012440|PILER-CR,CRT GAAGATCATAAAACTTATATCTAAAACTCCCTAC >3.5|1269056|37|NC_012440|CRISPRCasFinder TTTTATGAGCTGGAAATATCTATAAGAAAAATTGAGG >3.6|1269121|36|NC_012440|CRISPRCasFinder TTCTTTCTGCTCTACATATATTGTTTTTCCTGTGTA >3.7|1269185|38|NC_012440|CRISPRCasFinder TTCCTTCTTTGCTTGAAAATTGATCAGACGATAAATGA >3.8|1269251|36|NC_012440|CRISPRCasFinder TTGAAGATCATAAAACTTATATCTAAAACTCCCTAC >3.9|1269315|37|NC_012440|CRISPRCasFinder GTGGAAGATACATGTAATAAGGAACTGGGACGATGCA >3.10|1269380|38|NC_012440|CRISPRCasFinder TGTTGTTGTTGGTTGTATATTGACCATCACTGCGTCTT >3.11|1269317|35|NC_012440|CRT GGAAGATACATGTAATAAGGAACTGGGACGATGCA >3.12|1269382|36|NC_012440|CRT TTGTTGTTGGTTGTATATTGACCATCACTGCGTCTT |
cas2,cas1,cas4,cas3,cas5 |
CRISPR arrays and Neighbor proteins around NC_012440_3
The CRISPR arrays of NC_012440_3 >merge|NC_012440|3|1269028-1269447|PILER-CR,CRISPRCasFinder,CRT GTTTTTTCTGAACCAAGTGGGGTATAAATTTTATGAGCTGGAAATATCTATAAGAAAAATTGAGGGTTTTTTCTGAACCAAGTGGGGTATAAATTCTTTCTGCTCTACATATATTGTTTTTCCTGTGTAGTTTTTTCTGAACCAAGTGGGGTATAAATTCCTTCTTTGCTTGAAAATTGATCAGACGATAAATGAGTTTTTTCTGAACCAAGTGGGGTATAAATTGAAGATCATAAAACTTATATCTAAAACTCCCTACGTTTTTTCTGAACCAAGTGGGGTATAAAGTGGAAGATACATGTAATAAGGAACTGGGACGATGCAGTTTTCTTTGAACTAAGTGGGGTATAAATGTTGTTGTTGGTTGTATATTGACCATCACTGCGTCTTGTTTGTTTTAAACTAAGTGGGATAGAAAGT >NC_012440|3|3|1269028-1269316|PILER-CR GTTTTTTCTGAACCAAGTGGGGTATAAATT TTATGAGCTGGAAATATCTATAAGAAAAATTGAGG GTTTTTTCTGAACCAAGTGGGGTATAAATT CTTTCTGCTCTACATATATTGTTTTTCCTGTGTA GTTTTTTCTGAACCAAGTGGGGTATAAATT CCTTCTTTGCTTGAAAATTGATCAGACGATAAATGA GTTTTTTCTGAACCAAGTGGGGTATAAATT GAAGATCATAAAACTTATATCTAAAACTCCCTAC GTTTTTTCTGAACCAAGTGGGGTATAAAGT >NC_012440|3|3|1269028-1269445|CRISPRCasFinder GTTTTTTCTGAACCAAGTGGGGTATAAA TTTTATGAGCTGGAAATATCTATAAGAAAAATTGAGG GTTTTTTCTGAACCAAGTGGGGTATAAA TTCTTTCTGCTCTACATATATTGTTTTTCCTGTGTA GTTTTTTCTGAACCAAGTGGGGTATAAA TTCCTTCTTTGCTTGAAAATTGATCAGACGATAAATGA GTTTTTTCTGAACCAAGTGGGGTATAAA TTGAAGATCATAAAACTTATATCTAAAACTCCCTAC GTTTTTTCTGAACCAAGTGGGGTATAAA GTGGAAGATACATGTAATAAGGAACTGGGACGATGCA GTTTTCTTTGAACTAAGTGGGGTATAAA TGTTGTTGTTGGTTGTATATTGACCATCACTGCGTCTT GTTTGTTTTAAACTAAGTGGGATAGAAA >NC_012440|3|3|1269028-1269447|CRT GTTTTTTCTGAACCAAGTGGGGTATAAATT TTATGAGCTGGAAATATCTATAAGAAAAATTGAGG GTTTTTTCTGAACCAAGTGGGGTATAAATT CTTTCTGCTCTACATATATTGTTTTTCCTGTGTA GTTTTTTCTGAACCAAGTGGGGTATAAATT CCTTCTTTGCTTGAAAATTGATCAGACGATAAATGA GTTTTTTCTGAACCAAGTGGGGTATAAATT GAAGATCATAAAACTTATATCTAAAACTCCCTAC GTTTTTTCTGAACCAAGTGGGGTATAAAGT GGAAGATACATGTAATAAGGAACTGGGACGATGCA GTTTTCTTTGAACTAAGTGGGGTATAAATG TTGTTGTTGGTTGTATATTGACCATCACTGCGTCTT GTTTGTTTTAAACTAAGTGGGATAGAAAGT
>NC_012440.1|WP_012675710.1|1268464_1268731_+|CRISPR-associated-endonuclease-Cas2 MFVIVTYDISEDRRLNKVRKILKKYLYWSQLSTFEGEISEGKLAQCMSEINDVIDRNEDSIYVYEVKNPRNIKKKVLGIKKSYMDNFL >NC_012440.1|WP_012676200.1|1267467_1268463_+|type-I-B-CRISPR-associated-endonuclease-Cas1 MSRRFYINSNGRLRRKENTLYFETEQNGEIVKKALPINDIDVIYVFGELDINTKALNYLSGYDIPIHFYNYYGFYSGSFLPRKKNVSGSLLVEQVRHYIDNKKRQYLAVSFVEGAAYHILRNLRKQNINSEDFEEIEKDLFPKIFETRNTEELMALEGNIRERYYQLFNKIINNEDFFMEKREKRPPDNPINALISFGNSIMYNTVLTEIYRTQLDPTISYLHTPQEKRFSLSLDLAEIFKPFIIDPLIFSLINNRQITIKDFDKDLNYAYLNENGRKKFLKAYEERLSKTIKHRKLKRKVSYRQLIRLECYKLIKHLISDEDYKPFKAWW >NC_012440.1|WP_148206450.1|1266003_1267395_-|DUF2357-domain-containing-protein MESNSINLKEIGIRHNDIKFLKYLEESEKVRIEDDILYVENFCGYLTDNILVIPSKIKKSLESFKKESDFQTFFNFFFEKFLNYIIRELSKENIIYSIALANFPVDESKPVESKIFKLLLLLEKKDELINSVHFVLSNPHKELIENEEYKNLGEVYVVNEDVLTDIISNPQFLYKTENGIIEDRYSPIKVLQYVTEETFDTLENRFIKYFLKEIETVLSEELEEFLYLKELREIKEEVEYALQTDIFVEVGNLSYFPSNSQVLMKKAGYREIFNIYRLFHSSFIPQIFKNLDIALSLKDMATLWEYYVLIEILKSLKKIYGNYETKINFEERTKQGTIYDYAVFEFEDGLKLYFQKSLYSYSRLEFRPDFIMEMNNKKYIFDAKFRIFEDNRKDILLNMHYYKDGLDAEFAVAVCYGNNTLGNFYFKDKGIYEIEFDKKFLNQEYFEGIGFLNLDLKKILIND >NC_012440.1|WP_012675939.1|1263635_1265981_-|hypothetical-protein MENKRHKDILIEVLQNLGGEAHLNKIYEEFKKLARKYNVQISKSYKATIRGTLERYSSDSNNFVGKEDIFYLKEKGTGIWGLRDIKEKTINSDLKGSYNQKKIALAGSIGKDDLKSLLSDIETKLKNKDKVSLWWSYPIKHCKEDYEKEKPFWFYFYQDGKLKARCKVVDFITHEGDDGIECPENWEDFILDEGWKGKKKLSERKNEIFKTWLLIDKIEELNEYIPLKDLKSFCNRKINPIALKNGFLYVYDPIINSKKFLENLKLENHQIASFYNALKTKGFVILAGLSGTGKTKIFEDFVKYFPNSKSIKKEKWIVTEDTEEKLVPIKKEQIQFGNGRLKIQDFIESINEKLMSTTNRKVFLKINKYYTELIPVVEELKNRTDLINASEITNHLAVYIGSLFGFEIIEKEDIKKLGLKKLDKKLKIKKFEQNLDNNLFFPVRPDFKDSKSLLGFYNPLKREYHTTPLLDFVLEASKNYLENGKDSDPFFVLFDEMNLARVEYYFADFLSVLEAKKFQNLSEAIGSCSFIEFIKNLGKELNEGNYKFTSQSIKLHNEESSNVPKELFLPPNLYFIGTVNIDETTHMFSPKVLDRAFTIEFDVGCFDEYLNFLKNSSNGIENKGKFTEDLKKDFTNNGNFASINKGKILEFLEKNKKYKDKLEEINQILKPFNLHFGYRVFDEIVMFLYNCQNSLIKFENLDEAFDLALKMKVLPKFHGTRQKLKKPILRFLNFCEIKSPEELIKEGIPDLNSIDSDYKHTAHKLLEMLYKLQTQGFTSFM >NC_012440.1|WP_015899034.1|1263119_1263632_+|CRISPR-associated-protein-Cas4 MQPEINFEELKVNGIKINYYFICPRKLWLFDRKITMEEKSDRVLMGALLHETSYKRDKTKEVLIDNIISIDILDNLNIREVKYSDRMAEADRMQILYYLYYLKKLGISKKGIINYPKQKRREFVELTPEDERKIEQALMEIDRILKQEKPPPVIDVPYCKKCAYFEFCFG >NC_012440.1|WP_012675813.1|1262346_1263135_+|nucleotidyltransferase-domain-containing-protein MQDLIRQKLKNIEKNHNIKILYACESGSRAWGFESPDSDYDIRFIYVEKLDYYLSIEQKRDTIEIIDGELDFVGWELKKALFLLRKSNPSLIEWLNSPRVYLKDEEFYKKIKKLMEKSFNPKSLMYHYFHMAKSNYREYLKGDLVKVKKYFYVLRPIFALNWIQDKKRIPPIEFEILLNGVHISDKVKLEILKLLKEKKNTKELDLRPKIKILNEFIEKNIDYYEKFLKEFDFRTNLPEVYGYNFLLRRMIFKYDTEICNPK >NC_012440.1|WP_012676604.1|1259968_1262218_+|CRISPR-associated-helicase/endonuclease-Cas3 MRKIYAKIYYKDGKPVPETLEEHTENLLIELEKLKNIYGRDIVINEDFWENLKFACLFHDLGKVSDNFQSKLKRIVGEKIPRGVDKEIPHNFLSGIFLYSKSIRKLIPREFFDYIFYAVVFHHDREINFDSNYLKEVVEKDISKKADLLNWLEKYSIVIDRVDPDRSGILFKKIKEFKYSEHEKTKEVKRSKYFILLKGLLHRLDHSASAKVNVEEERIKNPREKLIQKLSKKENFTGLKPFQEKAKDYENENILLTASTGMGKTEFAINWIGESKAFYTLPVRVSVNAMYDRFVNYFGKDKIGLLHSDAVFYGFDKYEKFEDNLSIEEHIIRTQATRQFAMPITITTADQLFTATFKYPGYEKVYATLAYSKIVLDEPQSYSPDTLAIIIKGLQEISELGGKFCFMSATIHPFIRERLKDYCRILDAVFNTEKKHKITLLDNSLEETTEKIKDLYKKGKKVLVILNTVKKSQEIYKLLKDDKTNVKLLHSLFINRDRKEKEDQIKENFKTEQPVIWITTQLVEASLDIDYDVLFTEIATLDALIQRMGRVNRRKGRTIDENSSPNIFIALNNPSDQGKIYNKNIVELTKEALKNYEGEILTEEIKQSLMEEVYNEEKIKSTKFYEKFEKNLELLEYGYQADTKGEAQKLFREVLNINVIPEKILNENYTQIDNLINQILDKSIPYPERLKSIHKLNSFTLGLPIFRIKDQIPTDITPPKMRNKIFSVNFDYNSELGLIIESQQLGEIL >NC_012440.1|WP_041531102.1|1259227_1259950_+|type-I-B-CRISPR-associated-protein-Cas5 MKILRIKAYQLFANYRKPMSYNYWDSYPLPPLSTIRGWFHYVVWNGNKDENRHYIPISMSIQGKFSSVIQDLQTLIKFDRKRNTKGEIVIEGFNKAFSKSPTYVTNIFDINLHIYIKAEEHFLHRFIENVFKLEYPSIGRYEDLVRIDELKIIEPEPIDLYEEPHDIYYGIYINKKTADYFGLRGINYRMNFKYDGDLLNKTGLRYFERKDIVYVDNAVLGEGEILFDKEENRVIDLVGD >NC_012440.1|WP_041530902.1|1258932_1259211_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family MYQLVFTETYLRREKDFLKKHKDLIPRYKKVLRLLEINPYHPSLRLHKLKGKFKDKYSVSITMNYRIIITFAVVENEIVLIDIGSHDEIYKG >NC_012440.1|WP_015898877.1|1258683_1258932_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin MIITANELKTKGISFVEKILKKYREAYISVRGKPKFVILPIEEYEKLKEAELEKIIKEAEEDYKAGRIIKETAEEHIKRLGI >NC_012440.1|WP_041530903.1|1269585_1269963_+|hypothetical-protein MLDNYNSKSGSYYQYTLEDFRNGKVDKTLEALKKEITKMEQIPGYLESEQRNKLYNNFKQQYKDLTELKNKYDEAANNTLVWNMYNFLKRGRENSIATPEVKDGGLFGNDPSAVDKTTGKPIFEK >NC_012440.1|WP_148206413.1|1270050_1270341_-|hypothetical-protein MDTLLIITVIAVSIGVLMVIAGFTYFMFIVIYSIIYGFFGSNENVKEKEESIEKTEEEKEEEFIEDISDLTFFGENFFPRLYKYDIPAVDKRKFDD >NC_012440.1|WP_012675472.1|1270402_1271854_-|hypothetical-protein MKKWMPIFLLTSFFISSCGTSTKQASVEQIQKFQQSSAVAQLLYKLNNIKKVPTYLPKDAHSGYLWSDGYTFWINRKRTDHWIEMLTLYLKKACEKDGGKLIRKVKAADGFTATVEVENKVIAGDVCMRGDEKLFMIGGFHEGAGYFSSANNEVRWFPVVIYIWHKDTIKGVRPYSQLIAPDPDYKGKKATEVFGPDKISAFIMKMKDIKYDYGNFVVGSGSIRDKGAALRKFKIINEMVSFCNANGGQLYKDGIPIDEFMIKVVIEKNKLHFGNGAVFEGKYICKSPIRGFTIKLSQVNQKTTYISPYAHDFSYRLLIKDEIEQIQMASSEPLPEQIKEKDSAEASDIALETAKNKSGVIKQIGGIAYLSKYNGKDKEGCDLVSIIKTITAFSKKEILNFKVCNGNAIPLGNTPPESIAKKVILKAKILAKSCKLYNIRSMDVDNYQLRCFPLNDYEKCLYEIRYFRDGRLIKTEQINACRL >NC_012440.1|WP_041530904.1|1272069_1272333_-|hypothetical-protein MRKLVLLSAFITFLTFTTTQAETSANNSKGLSQKELDCYYSLYDKLEKLNYYSGKRAGAMNTLVLLLKMEGLTSCEILKYFKEITNE >NC_012440.1|WP_041530905.1|1272492_1272699_-|hypothetical-protein MKKHTSTFLQTVGVFLGITAFIGYLVLLEAVPADIPFAGVIKLLSILSQGTLIISHFWAEKSNWELGT >NC_012440.1|WP_012676131.1|1272815_1273445_+|class-I-SAM-dependent-methyltransferase MAKVEPFEEFTERYEEWFEKNRYAYLSELNAVKKLIPEGKGVEIGVGSGRFAVPLNIKYGVEPSLKMAKISKKKGIFVIRAVAEYLPFKNNSFDFCLFVTTICFVDDIDKSIKEAYRILRKEGKIVIGFIDKNSPLGVFYEKIKEKSPFYRYATFYSTEELTQILSQKGFGNFRYLQTVFKKLDDIKSVEPVKEGYGEGSFIVISAEKL >NC_012440.1|WP_015898909.1|1273445_1274303_-|YicC-family-protein MPYSMTGFAYVSQEFDEYDISVRIKSLNGKGIDISVKGHRDLIAFVELDVRNIIRSFFDRGSFQVFIDLKYRKPKLFMNIDNLKEAVETVKTVMEEIQLSPSDDKIYDLASGIAGEMEENLIDEELKSNTLDVVKKACEILKEERKREGDNLIKDIKNRLIILENIAEKIDRQKEEIISKAKERAVEKIRELLGEEFSERAFIEATIIADKMDITEEIVRLKTHIKRFKELLELDQPVGRKMDFLCQEMHREINTMGNKMPDFSEYTVEMKAQLEKIRQQVQNIE >NC_012440.1|WP_012676215.1|1274313_1275402_-|VIT1/CCC1-transporter-family-protein MRQIVEYAKEFYKDEINDFVTYSYLSEKAKDPELKKILKEIAEIEKSHAQFWKDFLQKRGEKIPETAHSKIRLFLLSVLSKIINPVFVVSFLELGESGAVKKYYDFLKKESIDEEEKEKIKKIIVDELEHETTFSKETQKLGVSNIRDFVLGMNDGLVEILGVVTGLSAVYLNNPFMVAISGLIVGIAGALSMGIGAFISVRSQRQVNEGIKEKLEIIFDIRPEKAVDEFKEKLVETGIPEKLAEEISSKLGKEKNSLKKLLVEEVTENEIVSGLFTGFAYLIGVLFPVLPYFFSPTSITALPFAVLFAGLALTVVATVISVLSGINVKKKILEMVLTAFLAAGLSYGFGSLMQSIFGINID >NC_012440.1|WP_012675281.1|1275398_1276595_-|bifunctional-glycosyltransferase/methyltransferase MVAVYNFLYTLLVFLYLPVFVLTNRKKGYRSDIRERFVLYSDSSKENTLWFHCASIGELNVAYPVIERLKEKHNILITVSSPRGKDFALKKYPYATVRSVPLDLPFLIKRFVDIYRPSALIITEGEFWLNLVVKTSERIPVLSINTRVSPSSFSFYRRFTPIYRKILNSFSRFLVRSEKDLKYLSFFVPEDKLVLCGDLKFVSSSQKKDLFLDKKGKKVIVAGSTHDPEEKVLITIYKNLRLKYPDLRLIIAPRHLERLDQIKKLLEEERLSFSLRTETDRLDSDVYIIDTIGELSGIYRYADVVFVGGTIAPVGGHNILEPAVEGKPVVIGNHYEKIEDLYRFLKKFNAVFSVNDGKEMEKLIDRLLEEGFKPELDISKYQEKILNCYIKNIEEYLV >NC_012440.1|WP_012676658.1|1276594_1277329_-|iron-export-ABC-transporter-permease-subunit-FetB MEYKFLLSYILVLAALFYLYKEKLDIEKTLLINSIRAFIQLLILGYLLSYIFKLESPLELLGILTFMILFAAFTGQRRVKLADKGYIVAFLSIFCASFIVLFSLIALNLITFKPNEIIPVGGMIIGNSLNVYTIAVDRMKGEVKNTIDIIENIIALGGSLKDAFYFVNRASIKAAMIPILNSLQTVGVIHIPGITVGMLIAGAHPLEAVSFQLVIMYMIVAVALFTGIFSVNFAYKKIIRTVFN |
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| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| NC_012440_4 | 1302353-1303310 | Orphan |
NA
Consensus repeat of NC_012440_4
|
14 spacers
spacers of NC_012440_4
>4.1|1302382|39|NC_012440|PILER-CR,CRISPRCasFinder,CRT TTAACAACATCTGTTGCTGTTACTGCAGTTACATCTGTA >4.2|1302450|39|NC_012440|PILER-CR,CRISPRCasFinder,CRT GTATCTTCTTCTGCTTCTATATAAGATATAGTTTTACCA >4.3|1302518|36|NC_012440|PILER-CR,CRISPRCasFinder,CRT AAGCGTGTATCTTGTGGTGTAACGAAATTGCGGGAT >4.4|1302583|37|NC_012440|PILER-CR,CRISPRCasFinder,CRT GTGGAAAGGTTTAAATTTTAATTAGTCCACTGGTGAA >4.5|1302649|38|NC_012440|PILER-CR,CRISPRCasFinder,CRT TTGGAAGTATAACATTTTTAGGCTTTGAAACTTCATCA >4.6|1302716|36|NC_012440|PILER-CR,CRISPRCasFinder,CRT TTTCACTCCGGTGGTGTTATCGCTCATTCTGGAATG >4.7|1302781|36|NC_012440|PILER-CR,CRISPRCasFinder,CRT ACCAGTGATGACGAAAGACTTGCAAGGTTCTGGGCT >4.8|1302846|37|NC_012440|PILER-CR,CRISPRCasFinder,CRT GCAGTTCTTAAAGCTCTGGAATCTATGAATGCAAAGT >4.9|1302912|37|NC_012440|PILER-CR,CRISPRCasFinder,CRT ACTTCCTGATTCTGTTTCAACAACATCCTGCGAAATT >4.10|1302978|39|NC_012440|PILER-CR,CRISPRCasFinder,CRT TTTTTCATAGCTACCCAAATAGGCTTTGCTACTGATGTG >4.11|1303046|36|NC_012440|PILER-CR,CRISPRCasFinder,CRT TCTGTTTTAGCAGGGATAACAGTTTTATTAACATTT >4.12|1303111|40|NC_012440|PILER-CR,CRISPRCasFinder,CRT CAGCAACAGGTTCAAGTATTTTCTGTATTGCTCCAAAAAT >4.13|1303180|36|NC_012440|PILER-CR,CRISPRCasFinder,CRT TGTATGTATACCTGTTCTCCTTTTTTGTACTCTACA >4.14|1303245|37|NC_012440|PILER-CR,CRISPRCasFinder,CRT TGAGCGTGTGTTTGCACATACGCAAACACACAAGAAA |
CRISPR arrays and Neighbor proteins around NC_012440_4
The CRISPR arrays of NC_012440_4 >merge|NC_012440|4|1302353-1303310|PILER-CR,CRISPRCasFinder,CRT GTTTTCTTTGAACCAAGTGGGATAGAAAGTTAACAACATCTGTTGCTGTTACTGCAGTTACATCTGTAGTTTTCTTTGAACCAAGTGGGATAGAAAGGTATCTTCTTCTGCTTCTATATAAGATATAGTTTTACCAGTTTTCTTTGAACCAAGTGGGATAGAAAGAAGCGTGTATCTTGTGGTGTAACGAAATTGCGGGATGTTTTCTTTGAACCAAGTGGGATAGAAAGGTGGAAAGGTTTAAATTTTAATTAGTCCACTGGTGAAGTTTTCTTTGAACCAAGTGGGATAGAAAGTTGGAAGTATAACATTTTTAGGCTTTGAAACTTCATCAGTTTTCTTTGAACCAAGTGGGATAGAAAGTTTCACTCCGGTGGTGTTATCGCTCATTCTGGAATGGTTTTCTTTGAACCAAGTGGGATAGAAAGACCAGTGATGACGAAAGACTTGCAAGGTTCTGGGCTGTTTTCTTTGAACCAAGTGGGATAGAAAGGCAGTTCTTAAAGCTCTGGAATCTATGAATGCAAAGTGTTTTCTTTGAACCAAGTGGGATAGAAAGACTTCCTGATTCTGTTTCAACAACATCCTGCGAAATTGTTTTCTTTGAACCAAGTGGGATAGAAAGTTTTTCATAGCTACCCAAATAGGCTTTGCTACTGATGTGGTTTTCTTTGAACCAAGTGGGATAGAAAGTCTGTTTTAGCAGGGATAACAGTTTTATTAACATTTGTTTTCTTTGAACCAAGTGGGATAGAAAGCAGCAACAGGTTCAAGTATTTTCTGTATTGCTCCAAAAATGTTTTCTTTGAACCAAGTGGGATAGAAAGTGTATGTATACCTGTTCTCCTTTTTTGTACTCTACAGTTTTCTTTGAACTAAGTGGGATAGAAAGTGAGCGTGTGTTTGCACATACGCAAACACACAAGAAAGTTTTCTTTGAACTAAGTGGAATAGAAAG >NC_012440|4|4|1302353-1303310|PILER-CR GTTTTCTTTGAACCAAGTGGGATAGAAAG TTAACAACATCTGTTGCTGTTACTGCAGTTACATCTGTA GTTTTCTTTGAACCAAGTGGGATAGAAAG GTATCTTCTTCTGCTTCTATATAAGATATAGTTTTACCA GTTTTCTTTGAACCAAGTGGGATAGAAAG AAGCGTGTATCTTGTGGTGTAACGAAATTGCGGGAT GTTTTCTTTGAACCAAGTGGGATAGAAAG GTGGAAAGGTTTAAATTTTAATTAGTCCACTGGTGAA GTTTTCTTTGAACCAAGTGGGATAGAAAG TTGGAAGTATAACATTTTTAGGCTTTGAAACTTCATCA GTTTTCTTTGAACCAAGTGGGATAGAAAG TTTCACTCCGGTGGTGTTATCGCTCATTCTGGAATG GTTTTCTTTGAACCAAGTGGGATAGAAAG ACCAGTGATGACGAAAGACTTGCAAGGTTCTGGGCT GTTTTCTTTGAACCAAGTGGGATAGAAAG GCAGTTCTTAAAGCTCTGGAATCTATGAATGCAAAGT GTTTTCTTTGAACCAAGTGGGATAGAAAG ACTTCCTGATTCTGTTTCAACAACATCCTGCGAAATT GTTTTCTTTGAACCAAGTGGGATAGAAAG TTTTTCATAGCTACCCAAATAGGCTTTGCTACTGATGTG GTTTTCTTTGAACCAAGTGGGATAGAAAG TCTGTTTTAGCAGGGATAACAGTTTTATTAACATTT GTTTTCTTTGAACCAAGTGGGATAGAAAG CAGCAACAGGTTCAAGTATTTTCTGTATTGCTCCAAAAAT GTTTTCTTTGAACCAAGTGGGATAGAAAG TGTATGTATACCTGTTCTCCTTTTTTGTACTCTACA GTTTTCTTTGAACTAAGTGGGATAGAAAG TGAGCGTGTGTTTGCACATACGCAAACACACAAGAAA GTTTTCTTTGAACTAAGTGGAATAGAAAG >NC_012440|4|4|1302353-1303310|CRISPRCasFinder GTTTTCTTTGAACCAAGTGGGATAGAAAG TTAACAACATCTGTTGCTGTTACTGCAGTTACATCTGTA GTTTTCTTTGAACCAAGTGGGATAGAAAG GTATCTTCTTCTGCTTCTATATAAGATATAGTTTTACCA GTTTTCTTTGAACCAAGTGGGATAGAAAG AAGCGTGTATCTTGTGGTGTAACGAAATTGCGGGAT GTTTTCTTTGAACCAAGTGGGATAGAAAG GTGGAAAGGTTTAAATTTTAATTAGTCCACTGGTGAA GTTTTCTTTGAACCAAGTGGGATAGAAAG TTGGAAGTATAACATTTTTAGGCTTTGAAACTTCATCA GTTTTCTTTGAACCAAGTGGGATAGAAAG TTTCACTCCGGTGGTGTTATCGCTCATTCTGGAATG GTTTTCTTTGAACCAAGTGGGATAGAAAG ACCAGTGATGACGAAAGACTTGCAAGGTTCTGGGCT GTTTTCTTTGAACCAAGTGGGATAGAAAG GCAGTTCTTAAAGCTCTGGAATCTATGAATGCAAAGT GTTTTCTTTGAACCAAGTGGGATAGAAAG ACTTCCTGATTCTGTTTCAACAACATCCTGCGAAATT GTTTTCTTTGAACCAAGTGGGATAGAAAG TTTTTCATAGCTACCCAAATAGGCTTTGCTACTGATGTG GTTTTCTTTGAACCAAGTGGGATAGAAAG TCTGTTTTAGCAGGGATAACAGTTTTATTAACATTT GTTTTCTTTGAACCAAGTGGGATAGAAAG CAGCAACAGGTTCAAGTATTTTCTGTATTGCTCCAAAAAT GTTTTCTTTGAACCAAGTGGGATAGAAAG TGTATGTATACCTGTTCTCCTTTTTTGTACTCTACA GTTTTCTTTGAACTAAGTGGGATAGAAAG TGAGCGTGTGTTTGCACATACGCAAACACACAAGAAA GTTTTCTTTGAACTAAGTGGAATAGAAAG >NC_012440|4|4|1302353-1303310|CRT GTTTTCTTTGAACCAAGTGGGATAGAAAG TTAACAACATCTGTTGCTGTTACTGCAGTTACATCTGTA GTTTTCTTTGAACCAAGTGGGATAGAAAG GTATCTTCTTCTGCTTCTATATAAGATATAGTTTTACCA GTTTTCTTTGAACCAAGTGGGATAGAAAG AAGCGTGTATCTTGTGGTGTAACGAAATTGCGGGAT GTTTTCTTTGAACCAAGTGGGATAGAAAG GTGGAAAGGTTTAAATTTTAATTAGTCCACTGGTGAA GTTTTCTTTGAACCAAGTGGGATAGAAAG TTGGAAGTATAACATTTTTAGGCTTTGAAACTTCATCA GTTTTCTTTGAACCAAGTGGGATAGAAAG TTTCACTCCGGTGGTGTTATCGCTCATTCTGGAATG GTTTTCTTTGAACCAAGTGGGATAGAAAG ACCAGTGATGACGAAAGACTTGCAAGGTTCTGGGCT GTTTTCTTTGAACCAAGTGGGATAGAAAG GCAGTTCTTAAAGCTCTGGAATCTATGAATGCAAAGT GTTTTCTTTGAACCAAGTGGGATAGAAAG ACTTCCTGATTCTGTTTCAACAACATCCTGCGAAATT GTTTTCTTTGAACCAAGTGGGATAGAAAG TTTTTCATAGCTACCCAAATAGGCTTTGCTACTGATGTG GTTTTCTTTGAACCAAGTGGGATAGAAAG TCTGTTTTAGCAGGGATAACAGTTTTATTAACATTT GTTTTCTTTGAACCAAGTGGGATAGAAAG CAGCAACAGGTTCAAGTATTTTCTGTATTGCTCCAAAAAT GTTTTCTTTGAACCAAGTGGGATAGAAAG TGTATGTATACCTGTTCTCCTTTTTTGTACTCTACA GTTTTCTTTGAACTAAGTGGGATAGAAAG TGAGCGTGTGTTTGCACATACGCAAACACACAAGAAA GTTTTCTTTGAACTAAGTGGAATAGAAAG
>NC_012440.1|WP_148206414.1|1300584_1302009_-|alpha/beta-hydrolase MGEGVMKEITLILHGWSDCSESFKDVKAFLIKNGIGSVDTIYYADYESREDNVTYEDVIDGLYDRFREKGFIDKEGNKLVDLNVIVHSTGGLVIRHFIAEYYRHRIDKCPVKKIIMLAPANFGSPLAHYGKSLLGMVFKGRYKFGDMFEVGRRLLNGLELASPYQWKLAHMDLLKERPYYNRNQIQTFIFVGNKGYGGLRKLVNKKGTDGTVVVCGTNLNPVKFILDFSREGKAVDVYVKDYRFDTAFAVLRNYDHGSIVDDIKPGRKSQIADLVLRAIKIKKPEEYAEFKKELEEITEKTFKNREIYQQFIVRAVDDHNKPIKDYTIEFFVYKYNGRYIRNGEFTKKKISAEEEYWSRRFHELITDEFHNNSTDPSFRRFIVGIKKLKNEIKECCKSLGSDIVLSMKIYVPRVDEGIYYETEKLKNIILLRTENGQIVDEKPSLFYPNTTTLIEMKINRSTKYVTVDIKPRKH >NC_012440.1|WP_012676332.1|1299499_1300588_+|succinylglutamate-desuccinylase/aspartoacylase-family-protein MEDLSRRNFIRLAGSSLLLLSLNPDEVFAKHNSKLHFKLPPKPLQYYIKEGKEKGGRVLIIGGIHGNEPGAYKAADILMDLDVKKGTVAVLPRTNFVSVLANVRGYNGDMNRKFHRISRKDPDYRYVSFIKDFIDDFRPDVVLSLHDGYGFHIKNKKHWGQCIVIDAVSYKGYPLYSTAKYVADRVNKKITKKHWKIPIHNTDTFNRYTKYKEQRKSLTYYVLSKCNIPAFCIEASKQLPDLETKTKMHLMMIKEFLEIFNVELDPGIDHVLSNLSSFINRKRVYSVRLNINGRTEIINSSKTIKVPAGSRIRFESVYGNRGSFVIPEGVNLNYSGFYYSRNIRFFLKDDYKKVFTLKFVKT >NC_012440.1|WP_012675869.1|1298444_1299530_+|L,D-transpeptidase-family-protein MRYLRVVITLIAAVVLGSFSYASQPTIEEVLKQLEAKNIDKAEELARQLPYEERIKLNIILLLQEGRKAEAQKLFSKISEKNKGVLENVIYIPEGSYAIVVSKSRQRLKVIKFVNDLPVEVLELRSITGKRPGDKLKEGDQRTPNGVYFPVKYLTKLAPMYGVGAFPLNYPNILDRKFLNKTGNGIWIHASDKPDRPYFSSNGCVVLNNEDFNKLKRFIKLKETPVVIVEDFEYTDAGSFKEKQMALIYFVYQWKRAWEETAKGNLDNYFFLYSERFVSKKGNKEQWMRYKRRISKLKDWIKIDIKNLSILKDGRMLDFGNIYVATFDMNYRSNNYNFKGKKILYIIREDGKWKILAEETL >NC_012440.1|WP_012676694.1|1297056_1298448_+|AAA-family-ATPase MENFFKFFGLKDDPFRVTPDIEYFYMSQAHKDVLDALEYLYHTGEGFAVIIGEPGTGKTTTVKKFLANHPYEILYAYIIFPSFYPLEMLRAILREFGVKTSPEEAESDLFAKLKEFLIKKKEEGHKVFIIVDEAQNLPIETMEELRILSNLETNREKLLQIVLTGQTELEKKINMPELRQLKERITVVAKLRNLDFNETVDYIKYKLEKAGNPKIHIPWYIYRLIFKYSQGNFRKINLIMRRTLMAAYVDESKKIKYKHLKEALKTLGFYEEAKEKKKLKYLALASVILAILLGLTGTFSWFLYAIATGEKKINSEPAQYKNMTKTQHTQHLKAETRGEKKKVHPPLKPEEQIKEFIKRWKNSWETQDFLRYISYYCKDFRWAGGGIEKWEKYKRKTILNKKFIKIYISDIKIRKIKENRWEVIFKQEYFSDKIDDVTLKKLIIIKSNGKYCIKEERTIRRIK >NC_012440.1|WP_012675832.1|1295880_1296744_+|complex-I-NDUFA9-subunit-family-protein MKILVTGGTGFVGRYLVEELSKEHQLVLPTRDIKKAELLFSGRGNLDNIKIIHFQEDLDHTVRKYRPEVIINLLGILYENRKKGITFEKVHFEYTKKLVDAASDIGIKLFVQMSALGADPSSKSRYQRTKGVAEEYIRSSNINYIIHRPSIIMGREQKLFQDMKKFGKIMPLFLAPEGRVQPVHILDVRDCFLKSLDEEDEIFELCGDRVVTFKELFEFALKYAGYRRPVIQMPKIFFRFMLPFFKLLPEPPMTEDQYYMLQKDNVCSGKYRGVKELLGKIRNPFEF >NC_012440.1|WP_041530907.1|1295273_1295879_+|LysE-family-transporter MGIIEDISFGLFLGIAAAISPGALLALLISETLRGNIKNGILVSVSPIVTDLPILFVSIYILKKIENFTSLVGIISATGGVLLFYLGIKNIFAKHSEISTDMHGSFVKGVVINILNPYTYLFWFFIGAPYISDKGFVNSAAFVISFFIGITGSMILIAFFVEKIKRFIESRYYDYLLKFIGFLFIIFGVLLIKNSMKYLGL >NC_012440.1|WP_012676584.1|1294647_1295274_+|uracil-phosphoribosyltransferase MENIINVKNPALTNIVTKLRDINTDSYLFRKYISEAGRILLLEALKDEKTVEKKVKIWVGEYRFPEIEEERYVFIPIMRAGLPMLDGVFEVLKNAKAGFLAIKRNEETLESVLYYDRVPPLEGKNAVILDPMVATGGSLDYAVKVIKKKNPEKIISLNIIGAPEGLKRIAEKHPEIKVYIAQIDERLNDKGYIIPGIGDAGDRAFNTE >NC_012440.1|WP_012676016.1|1293802_1294588_-|nucleoside-triphosphate-pyrophosphohydrolase MEKTECREEGRRFQEVVDIVKRLRRECPWDREQTNQSIKNNLIEEAYELFEAIESDDDKAMVEELGDLLLQVVFHSQIKKDEGSFDINDVLENLKEKLIRRHPHVFGDVEYSQLEGEDHLKKWEAIKEKEKERESILEGIPKRMPALMRAVKVQKRMAKVGFDWENPEDVWEKVMEELNELKNAKTDKEREHEIGDLLIAVTNLARVYGIDPEQALHHSIDRTVNRFQYIEKKAKEKNKELKEMKLDDMEQLWQEAKSKGL >NC_012440.1|WP_015898990.1|1292961_1293849_-|MBL-fold-metallo-hydrolase MIWNNFGRKQKAKDYKLHRNFILDENSLLYREIRYAIAHGYDFIANLGHSTFLISYKGIRFLTDPFLSPHIFGIRRQKPALRPDLIPSVDFILISHAHYDHLDMRTLRRLKRDTTLIIPENTKPVLGRTYFKKIIELKRYEIFNNGSVTITALPVKHNKGRSLLFPNTDTVSYMIKIEDRTYYFAGDTAYFDGFKEYGRVFDIHTALLPIGGYEPTLLLHKIHMNPWEAIQAFIDLKAEFIVPIHYGTFHTIPKFVKVEAPLRHFTDEIKNRKLQHRAIIVEPNAIDLCITEKVN >NC_012440.1|WP_012676211.1|1292428_1292932_-|hypothetical-protein MKKWFLLLLSVVILSCSSVYNVQKKNINRDESIVILPFENFTEVPLAGQKASGIAEGVFVSKGFNISERFYNNKYEDYSDQEIKDLLKKASSKNIKYAVTGYVNEWRYKTGIDGEPAVSITLKIIETETGKTVWTAVGSKTGWGYESVGTVAQKLINEMIDGLRKNK >NC_012440.1|WP_012675559.1|1304526_1304871_-|hypothetical-protein MEKVISETLENLRCEDFLPSDDILENRLLFGAIHRLYSKKELRIAKDELSAAYRQYYTLYPDMIKEQLRIIENSNGNGMADIRFIDVVFEPANVSMNEIGKRYGVYNRKSFNLN >NC_012440.1|WP_012675906.1|1304901_1305864_-|hypothetical-protein MSDRWLDQEGVNEGVLSEYYYRMLPKPKNGKIDEERYKTIFWNFIYKDEEGIESRDYSIYPLEEVKQELEELARGIGNILEKSVTSGLKIDEMYTSAGHHAVHLLIMQGRYAFAMGFLHLLDVNIKEKSMGLTPLHTVFMSRRYIGRLIKTKSVGTDVIRTVGGSMNIEQSLEEDRYKRMQTQEESVKRFLSSEFFRTNPDIIEEKLINGKKALITWLLERGADPLETDYFGRDVIDWARFYSLEMDDNSLLEYMLKEIDRLAIELPKQNKEEIEMREKIARQIQVIQQFKKRKQIMASKVYEDNPDFKGKKIPKKVSQQ >NC_012440.1|WP_012675930.1|1305986_1306904_-|hypothetical-protein MQLNITNIREEDLANRVVRSRDLFRDNILPNFNISFSEGDVLYIIRGEAKATGDIFFSKYQADLEIGYNHSSVLDIFTYDSKDNAVILERVPLYFVRETSNKNKYYLIPPKTPSCSESYAYDDSGDPYISSLSVNYTYNYSTGYFYNYASTCDPSSYGLYSFLYGVSKDPQTTCDKVGMYGSGCKSLGYKYYDEDTGTYYLENPSNWTESAKGFEFGFKLEGYIRFFDEYTQEERDVGEVFYKEKDGVGFVLLRMTVAGETVDYLLRLDSGTILAKRFYIKDRSVIMRYVNGPAIQKIKDAMLTN >NC_012440.1|WP_015898950.1|1307385_1308159_-|5'/3'-nucleotidase-SurE MEKYRVLLVNDDGYQSEGLLSLRKKLLNENFEVITVTPDRNMSGTSHSLTFTRPLKIEKLEENFYYIVDGTPADCVHLGYHIILNGEKPDILISGINTGPNLGNDIFYSGTVGAAREGTMFGIPSVAFSPASSKNPDFEGMADLAIKIVKQILHKGLPEKVFLNVTFPNIKIDQIKGFLLTRQGRGAYREEIKKYISPSKEVYYWIGGEEALEEECERGTDYTAVREGYVSITPIRLDLTDYRGIEILEKLSFLSIE >NC_012440.1|WP_012676001.1|1308305_1308596_-|integration-host-factor-subunit-beta MTKAEIVEWILKNKNPEVSKKDVSDVVNAIFEKIIQELVTGEDGHKVQISGFGTFIVKKRAPKIGRNPKTKEEKLIPERFGISFKAGKHLKESLSK >NC_012440.1|WP_012675364.1|1308636_1309155_-|gamma-carbonic-anhydrase-family-protein MAIIKPYKGKYPKIHPSAFIAENAVIIGDVEIGEDCSIWYNVVIRGDVNYIRIGDRTNIQDGTIIHVDHKKYPTIIGKEVTVGHNVMLHACTIEDRCLIGMSATVMDGVVVGRESIIGAGALVTPNKKIEPQSLWTGSPAKFKRKLTEEEIQWLEKSYQNYIRYKNSYLNQL >NC_012440.1|WP_012676056.1|1309261_1309747_-|6-carboxytetrahydropterin-synthase MRYEITKRFKFEAGHRVWKQNLSSGKGAKLMADEIPPNPCINIHGHSYKVEVTVGSDKLNEQEMVIDFYHIKSALKDLIDNQLDHSFIIDKNDPLFPKFKENFGFLKLTVVDFCPTAEALAKYIYDFLEDKLREAGLLDEIKVVSVTIWETETGKAVYKGK >NC_012440.1|WP_015899042.1|1309758_1310538_-|dihydroorotate-dehydrogenase-electron-transfer-subunit MIYDRKYKIVENRYISGITWLLRVKAPELKDAPAGSFVMVRSSEDYLYDPMMRRAFAIADIQGDDILIFYDVYGKGTRALTEKKEGEEINILAPLGRNFFPENFDHYILVGGGIGFAGLSLFMRRLKEKGRSFKAIYGVRRKEQLSMLEWIEENGFKDDVIVYTEDGSYGIKGLVTKDLEDLIKEKENTALMVCGPKGMMKAVMEVAKKTETPAYLSLESKMACGFGICIGCVVKDTESNSYVRVCYEGPVFDGHKIQF >NC_012440.1|WP_012675767.1|1310642_1312352_-|succinate-dehydrogenase-flavoprotein-subunit MLKYDVLIVGAGGAGLMAALEASKAKDVKVGVVTKVYPTRSHTGAAQGGINAALANVDASDSPEVHTFDTVKGSDYLGDQDAIEYMCQEAPKRIYELEHLGVPFSRLPDGRIAQRPFGGAGFPRTCYAADKTGHVILHTLYEQCLRNDVEFLNEWFVKELIVDNGEVKGVIAIDIRNGEVHAIQTKAVIFATGGYARVYWVRNTNAIGSTGDGMAICYRAGIPLKDMEFVQFHPTGLRSTGILVTEGARGEGGYLINNKGERFMEKYAPEKMELAPRDMVARAMETEIIEGRGWGEGMMAYVHLDLRHLGAKKIKERLPQIRMLAIDFEGVDPIEEPIPVRPTAHYSMGGIHVEDYKTSMTPVKGVYAVGECACVSVHGANRLGGNSLLDLVVFGKPAGAAAVEYARNKPEDTTFNLKAEEERARKEIEELLKKESKENINDIRIEMAQTMWDKVGIFREEKPMLEAIEKIKELKERYKNLAPGDSGKLFNTALINYLELGFLLDLAEAIAITAEMRKESRGAHARRDYPKRDDENFLKHSLSYYTEDGPKVEYIDVRITKYEPQERKY >NC_012440.1|WP_012675742.1|1312447_1313737_-|phosphoribosylamine--glycine-ligase MKVLVVGNGGREHALAWKIKQSPLVKELYCAKGNAGIWQIARKVDISPTDIKNLVKFAKEEKIDLTVVGPEQPLSEGIVDAFEEAGLKIFGHRRSSAILEASKVFAKNFMKKYGIPTAFYETFDNENEAVEFVKKMGTPIVIKADGLAAGKGVVIANSEEEAVNTIKDMFGGRFGEASKRIVIEEFLTGEEASYIAMVKGDKLVPMATSQDHKRVFDNDKGPNTGGMGAYSPAPLVTPEIEKEILEKIMYPTLRGMQSEGRELCGFLYAGLMIGEKGINVLEFNVRMGDPETQPIMRRLKSDLVEHIMDILEGRIESVKPEWSEDYSIGVVMASAGYPGKYEKGKVITGIEDAEKDPDIVVFHAGTDIKDGNLVTSGGRVLTVTATGKTLTEAKEKVYRAVEKIHFEGAHYRRDIGDKGIKRLKQLGIE |
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| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_012440_5 | 1307009-1307096 | Orphan |
NA
Consensus repeat of NC_012440_5
|
1 spacers
spacers of NC_012440_5
>5.1|1307032|42|NC_012440|CRISPRCasFinder GGCTTTATCAAGAAAGATAATATCATTTAACACTTGTGTTTC |
CRISPR arrays and Neighbor proteins around NC_012440_5
The CRISPR arrays of NC_012440_5 >merge|NC_012440|5|1307009-1307096|CRISPRCasFinder CTTTGAACTAAGCGGGATAGAAAGGCTTTATCAAGAAAGATAATATCATTTAACACTTGTGTTTCTTTTGAACTAAGCGGGATAGAAA >NC_012440|5|5|1307009-1307096|CRISPRCasFinder CTTTGAACTAAGCGGGATAGAAA GGCTTTATCAAGAAAGATAATATCATTTAACACTTGTGTTTC TTTTGAACTAAGCGGGATAGAAA
>NC_012440.1|WP_012675930.1|1305986_1306904_-|hypothetical-protein MQLNITNIREEDLANRVVRSRDLFRDNILPNFNISFSEGDVLYIIRGEAKATGDIFFSKYQADLEIGYNHSSVLDIFTYDSKDNAVILERVPLYFVRETSNKNKYYLIPPKTPSCSESYAYDDSGDPYISSLSVNYTYNYSTGYFYNYASTCDPSSYGLYSFLYGVSKDPQTTCDKVGMYGSGCKSLGYKYYDEDTGTYYLENPSNWTESAKGFEFGFKLEGYIRFFDEYTQEERDVGEVFYKEKDGVGFVLLRMTVAGETVDYLLRLDSGTILAKRFYIKDRSVIMRYVNGPAIQKIKDAMLTN >NC_012440.1|WP_012675906.1|1304901_1305864_-|hypothetical-protein MSDRWLDQEGVNEGVLSEYYYRMLPKPKNGKIDEERYKTIFWNFIYKDEEGIESRDYSIYPLEEVKQELEELARGIGNILEKSVTSGLKIDEMYTSAGHHAVHLLIMQGRYAFAMGFLHLLDVNIKEKSMGLTPLHTVFMSRRYIGRLIKTKSVGTDVIRTVGGSMNIEQSLEEDRYKRMQTQEESVKRFLSSEFFRTNPDIIEEKLINGKKALITWLLERGADPLETDYFGRDVIDWARFYSLEMDDNSLLEYMLKEIDRLAIELPKQNKEEIEMREKIARQIQVIQQFKKRKQIMASKVYEDNPDFKGKKIPKKVSQQ >NC_012440.1|WP_012675559.1|1304526_1304871_-|hypothetical-protein MEKVISETLENLRCEDFLPSDDILENRLLFGAIHRLYSKKELRIAKDELSAAYRQYYTLYPDMIKEQLRIIENSNGNGMADIRFIDVVFEPANVSMNEIGKRYGVYNRKSFNLN >NC_012440.1|WP_148206414.1|1300584_1302009_-|alpha/beta-hydrolase MGEGVMKEITLILHGWSDCSESFKDVKAFLIKNGIGSVDTIYYADYESREDNVTYEDVIDGLYDRFREKGFIDKEGNKLVDLNVIVHSTGGLVIRHFIAEYYRHRIDKCPVKKIIMLAPANFGSPLAHYGKSLLGMVFKGRYKFGDMFEVGRRLLNGLELASPYQWKLAHMDLLKERPYYNRNQIQTFIFVGNKGYGGLRKLVNKKGTDGTVVVCGTNLNPVKFILDFSREGKAVDVYVKDYRFDTAFAVLRNYDHGSIVDDIKPGRKSQIADLVLRAIKIKKPEEYAEFKKELEEITEKTFKNREIYQQFIVRAVDDHNKPIKDYTIEFFVYKYNGRYIRNGEFTKKKISAEEEYWSRRFHELITDEFHNNSTDPSFRRFIVGIKKLKNEIKECCKSLGSDIVLSMKIYVPRVDEGIYYETEKLKNIILLRTENGQIVDEKPSLFYPNTTTLIEMKINRSTKYVTVDIKPRKH >NC_012440.1|WP_012676332.1|1299499_1300588_+|succinylglutamate-desuccinylase/aspartoacylase-family-protein MEDLSRRNFIRLAGSSLLLLSLNPDEVFAKHNSKLHFKLPPKPLQYYIKEGKEKGGRVLIIGGIHGNEPGAYKAADILMDLDVKKGTVAVLPRTNFVSVLANVRGYNGDMNRKFHRISRKDPDYRYVSFIKDFIDDFRPDVVLSLHDGYGFHIKNKKHWGQCIVIDAVSYKGYPLYSTAKYVADRVNKKITKKHWKIPIHNTDTFNRYTKYKEQRKSLTYYVLSKCNIPAFCIEASKQLPDLETKTKMHLMMIKEFLEIFNVELDPGIDHVLSNLSSFINRKRVYSVRLNINGRTEIINSSKTIKVPAGSRIRFESVYGNRGSFVIPEGVNLNYSGFYYSRNIRFFLKDDYKKVFTLKFVKT >NC_012440.1|WP_012675869.1|1298444_1299530_+|L,D-transpeptidase-family-protein MRYLRVVITLIAAVVLGSFSYASQPTIEEVLKQLEAKNIDKAEELARQLPYEERIKLNIILLLQEGRKAEAQKLFSKISEKNKGVLENVIYIPEGSYAIVVSKSRQRLKVIKFVNDLPVEVLELRSITGKRPGDKLKEGDQRTPNGVYFPVKYLTKLAPMYGVGAFPLNYPNILDRKFLNKTGNGIWIHASDKPDRPYFSSNGCVVLNNEDFNKLKRFIKLKETPVVIVEDFEYTDAGSFKEKQMALIYFVYQWKRAWEETAKGNLDNYFFLYSERFVSKKGNKEQWMRYKRRISKLKDWIKIDIKNLSILKDGRMLDFGNIYVATFDMNYRSNNYNFKGKKILYIIREDGKWKILAEETL >NC_012440.1|WP_012676694.1|1297056_1298448_+|AAA-family-ATPase MENFFKFFGLKDDPFRVTPDIEYFYMSQAHKDVLDALEYLYHTGEGFAVIIGEPGTGKTTTVKKFLANHPYEILYAYIIFPSFYPLEMLRAILREFGVKTSPEEAESDLFAKLKEFLIKKKEEGHKVFIIVDEAQNLPIETMEELRILSNLETNREKLLQIVLTGQTELEKKINMPELRQLKERITVVAKLRNLDFNETVDYIKYKLEKAGNPKIHIPWYIYRLIFKYSQGNFRKINLIMRRTLMAAYVDESKKIKYKHLKEALKTLGFYEEAKEKKKLKYLALASVILAILLGLTGTFSWFLYAIATGEKKINSEPAQYKNMTKTQHTQHLKAETRGEKKKVHPPLKPEEQIKEFIKRWKNSWETQDFLRYISYYCKDFRWAGGGIEKWEKYKRKTILNKKFIKIYISDIKIRKIKENRWEVIFKQEYFSDKIDDVTLKKLIIIKSNGKYCIKEERTIRRIK >NC_012440.1|WP_012675832.1|1295880_1296744_+|complex-I-NDUFA9-subunit-family-protein MKILVTGGTGFVGRYLVEELSKEHQLVLPTRDIKKAELLFSGRGNLDNIKIIHFQEDLDHTVRKYRPEVIINLLGILYENRKKGITFEKVHFEYTKKLVDAASDIGIKLFVQMSALGADPSSKSRYQRTKGVAEEYIRSSNINYIIHRPSIIMGREQKLFQDMKKFGKIMPLFLAPEGRVQPVHILDVRDCFLKSLDEEDEIFELCGDRVVTFKELFEFALKYAGYRRPVIQMPKIFFRFMLPFFKLLPEPPMTEDQYYMLQKDNVCSGKYRGVKELLGKIRNPFEF >NC_012440.1|WP_041530907.1|1295273_1295879_+|LysE-family-transporter MGIIEDISFGLFLGIAAAISPGALLALLISETLRGNIKNGILVSVSPIVTDLPILFVSIYILKKIENFTSLVGIISATGGVLLFYLGIKNIFAKHSEISTDMHGSFVKGVVINILNPYTYLFWFFIGAPYISDKGFVNSAAFVISFFIGITGSMILIAFFVEKIKRFIESRYYDYLLKFIGFLFIIFGVLLIKNSMKYLGL >NC_012440.1|WP_012676584.1|1294647_1295274_+|uracil-phosphoribosyltransferase MENIINVKNPALTNIVTKLRDINTDSYLFRKYISEAGRILLLEALKDEKTVEKKVKIWVGEYRFPEIEEERYVFIPIMRAGLPMLDGVFEVLKNAKAGFLAIKRNEETLESVLYYDRVPPLEGKNAVILDPMVATGGSLDYAVKVIKKKNPEKIISLNIIGAPEGLKRIAEKHPEIKVYIAQIDERLNDKGYIIPGIGDAGDRAFNTE >NC_012440.1|WP_015898950.1|1307385_1308159_-|5'/3'-nucleotidase-SurE MEKYRVLLVNDDGYQSEGLLSLRKKLLNENFEVITVTPDRNMSGTSHSLTFTRPLKIEKLEENFYYIVDGTPADCVHLGYHIILNGEKPDILISGINTGPNLGNDIFYSGTVGAAREGTMFGIPSVAFSPASSKNPDFEGMADLAIKIVKQILHKGLPEKVFLNVTFPNIKIDQIKGFLLTRQGRGAYREEIKKYISPSKEVYYWIGGEEALEEECERGTDYTAVREGYVSITPIRLDLTDYRGIEILEKLSFLSIE >NC_012440.1|WP_012676001.1|1308305_1308596_-|integration-host-factor-subunit-beta MTKAEIVEWILKNKNPEVSKKDVSDVVNAIFEKIIQELVTGEDGHKVQISGFGTFIVKKRAPKIGRNPKTKEEKLIPERFGISFKAGKHLKESLSK >NC_012440.1|WP_012675364.1|1308636_1309155_-|gamma-carbonic-anhydrase-family-protein MAIIKPYKGKYPKIHPSAFIAENAVIIGDVEIGEDCSIWYNVVIRGDVNYIRIGDRTNIQDGTIIHVDHKKYPTIIGKEVTVGHNVMLHACTIEDRCLIGMSATVMDGVVVGRESIIGAGALVTPNKKIEPQSLWTGSPAKFKRKLTEEEIQWLEKSYQNYIRYKNSYLNQL >NC_012440.1|WP_012676056.1|1309261_1309747_-|6-carboxytetrahydropterin-synthase MRYEITKRFKFEAGHRVWKQNLSSGKGAKLMADEIPPNPCINIHGHSYKVEVTVGSDKLNEQEMVIDFYHIKSALKDLIDNQLDHSFIIDKNDPLFPKFKENFGFLKLTVVDFCPTAEALAKYIYDFLEDKLREAGLLDEIKVVSVTIWETETGKAVYKGK >NC_012440.1|WP_015899042.1|1309758_1310538_-|dihydroorotate-dehydrogenase-electron-transfer-subunit MIYDRKYKIVENRYISGITWLLRVKAPELKDAPAGSFVMVRSSEDYLYDPMMRRAFAIADIQGDDILIFYDVYGKGTRALTEKKEGEEINILAPLGRNFFPENFDHYILVGGGIGFAGLSLFMRRLKEKGRSFKAIYGVRRKEQLSMLEWIEENGFKDDVIVYTEDGSYGIKGLVTKDLEDLIKEKENTALMVCGPKGMMKAVMEVAKKTETPAYLSLESKMACGFGICIGCVVKDTESNSYVRVCYEGPVFDGHKIQF >NC_012440.1|WP_012675767.1|1310642_1312352_-|succinate-dehydrogenase-flavoprotein-subunit MLKYDVLIVGAGGAGLMAALEASKAKDVKVGVVTKVYPTRSHTGAAQGGINAALANVDASDSPEVHTFDTVKGSDYLGDQDAIEYMCQEAPKRIYELEHLGVPFSRLPDGRIAQRPFGGAGFPRTCYAADKTGHVILHTLYEQCLRNDVEFLNEWFVKELIVDNGEVKGVIAIDIRNGEVHAIQTKAVIFATGGYARVYWVRNTNAIGSTGDGMAICYRAGIPLKDMEFVQFHPTGLRSTGILVTEGARGEGGYLINNKGERFMEKYAPEKMELAPRDMVARAMETEIIEGRGWGEGMMAYVHLDLRHLGAKKIKERLPQIRMLAIDFEGVDPIEEPIPVRPTAHYSMGGIHVEDYKTSMTPVKGVYAVGECACVSVHGANRLGGNSLLDLVVFGKPAGAAAVEYARNKPEDTTFNLKAEEERARKEIEELLKKESKENINDIRIEMAQTMWDKVGIFREEKPMLEAIEKIKELKERYKNLAPGDSGKLFNTALINYLELGFLLDLAEAIAITAEMRKESRGAHARRDYPKRDDENFLKHSLSYYTEDGPKVEYIDVRITKYEPQERKY >NC_012440.1|WP_012675742.1|1312447_1313737_-|phosphoribosylamine--glycine-ligase MKVLVVGNGGREHALAWKIKQSPLVKELYCAKGNAGIWQIARKVDISPTDIKNLVKFAKEEKIDLTVVGPEQPLSEGIVDAFEEAGLKIFGHRRSSAILEASKVFAKNFMKKYGIPTAFYETFDNENEAVEFVKKMGTPIVIKADGLAAGKGVVIANSEEEAVNTIKDMFGGRFGEASKRIVIEEFLTGEEASYIAMVKGDKLVPMATSQDHKRVFDNDKGPNTGGMGAYSPAPLVTPEIEKEILEKIMYPTLRGMQSEGRELCGFLYAGLMIGEKGINVLEFNVRMGDPETQPIMRRLKSDLVEHIMDILEGRIESVKPEWSEDYSIGVVMASAGYPGKYEKGKVITGIEDAEKDPDIVVFHAGTDIKDGNLVTSGGRVLTVTATGKTLTEAKEKVYRAVEKIHFEGAHYRRDIGDKGIKRLKQLGIE >NC_012440.1|WP_012676382.1|1313763_1315044_-|diaminopimelate-decarboxylase MEEGFSRYFYYRENQLFCENIPIKEIASKVGTPFYLYSKQAILDRIDQYKKAFEEYNTLICYAAKANSNLSILKIFEENDLGLDIVSGGELYKAKKAGFPSNKIVYAGVGKTDFELEYAIRENILSFNVESEMEIDVLDELAEKLNKTVRISIRVNPDVDPKTHPYISTGLRKSKFGIDIDEALNVYRKAVKKKNIDVIGIHCHIGSQIMEISPYVEAVEKTAELVFRLKKEGIELQHFDIGGGIGIRYRPEDNPPTPEDLAKAVIPIVRTTGLRLIIEPGRSLIGEAGALITQVVFLKNKGDKHFIIVDSGMNDLLRPAMYNAYHHILSVEKKERKVVADIVGPICETGDFFALDREIDDVQRKDYLAVMSAGAYGSSMSSNYNVRPRAAEVLVSDNSFYLIKEREDYSYITKLEEDAMASLITE >NC_012440.1|WP_012675278.1|1315127_1315727_+|septum-site-determining-protein-MinC MGLEIKGVTIPALMIKLDKSRSFEENLEELEKKLSSAFFQGSVSVVDLSDMELSEDQKEKIESILKKYNSKVLGYRTSDKRSEKRSISNVSEKKSLKIINKTLRSGQRVEYDGDILIIGDVNPDAYVIASGNIIVMGTLRGIVHAGANGDETAVIMALKLKPQQLRIASYLTRSPDEMEEPEYPEKAYIEDNQIYIDKI >NC_012440.1|WP_041531107.1|1315749_1316559_+|septum-site-determining-protein-MinD MEERKNGKNARVFVVTSGKGGVGKTTVTANVATSLAKMGKKVLTIDADIGLRNLDMILGLENRIVYDIVDVVEGRVSPEKAFVKDKRGLSLYLLPAAQTKDKEAVKPEQLVEIIEAVREQFDYIFIDSPAGIEGGFKTAAAPADEALVVTNPEVSSVRDADRIIGLLESMEKENIRLIVNRIRVHQVKKGEMLSVEDIEEILHIPKVGIVPDEEKMVDFTNKGEPIVLYAENSPAGRALINIARRLEGFDVPFDELEVKKGFLSRLFGR |
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| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|---|---|---|---|---|---|---|---|
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | AP014380 | Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S43-C70, *** SEQUENCING IN PROGRESS *** | 31653-31686 | 5 | 0.853 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP013709 | Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence | 103792-103825 | 6 | 0.824 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP013682 | Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence | 106124-106157 | 6 | 0.824 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP013295 | Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence | 116840-116873 | 6 | 0.824 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP013844 | Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence | 149229-149262 | 6 | 0.824 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | JQ680368 | Unidentified phage clone 2204_scaffold14 genomic sequence | 8581-8614 | 7 | 0.794 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP040462 | Enterococcus sp. M190262 plasmid pM190262, complete sequence | 8080-8113 | 8 | 0.765 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NC_021539 | Listeria phage LP-030-2, complete genome | 28534-28567 | 8 | 0.765 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP013709 | Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence | 11429-11462 | 9 | 0.735 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP013844 | Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence | 47575-47608 | 9 | 0.735 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP024844 | Streptococcus iniae strain FP5228 plasmid unnamed1, complete sequence | 6329-6362 | 9 | 0.735 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | MN176230 | Bacillus phage 056SW001B, complete genome | 50145-50178 | 9 | 0.735 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NC_048797 | Bacillus phage vB_BmeM-Goe8, complete genome | 107377-107410 | 9 | 0.735 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP023350 | Escherichia coli strain ETEC-2264 plasmid unnamed1, complete sequence | 65597-65630 | 9 | 0.735 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP024241 | Escherichia coli O114:H49 strain 90-9280 plasmid unnamed1 | 63950-63983 | 9 | 0.735 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP024238 | Escherichia coli O15:H11 strain 90-9272 plasmid unnamed | 252064-252097 | 9 | 0.735 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | KM359505 | Prochlorococcus phage P-TIM68, complete genome | 50657-50690 | 9 | 0.735 |
| NC_012440_1 | 1.2|120946|34|NC_012440|PILER-CR | 120946-120979 | 34 | MN693296 | Marine virus AFVG_25M162, complete genome | 9003-9036 | 10 | 0.706 |
| NC_012440_2 | 2.9|1254637|35|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254637-1254671 | 35 | NZ_CP021525 | Acetobacter ascendens strain SRCM101447 plasmid pAP1447-1 | 24675-24709 | 10 | 0.714 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP045289 | Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 plasmid pCff2, complete sequence | 5158-5191 | 10 | 0.706 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP045289 | Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 plasmid pCff2, complete sequence | 8267-8300 | 10 | 0.706 |
| NC_012440_1 | 1.1|120873|36|NC_012440|PILER-CR | 120873-120908 | 36 | MT713136 | Aeromonas phage AP1, complete genome | 157030-157065 | 11 | 0.694 |
| NC_012440_1 | 1.1|120873|36|NC_012440|PILER-CR | 120873-120908 | 36 | MH791398 | UNVERIFIED: Aeromonas phage Asswx_1, complete genome | 83385-83420 | 11 | 0.694 |
| NC_012440_1 | 1.1|120873|36|NC_012440|PILER-CR | 120873-120908 | 36 | NC_048674 | Aeromonas phage AS-sw, partial genome | 80550-80585 | 11 | 0.694 |
| NC_012440_1 | 1.1|120873|36|NC_012440|PILER-CR | 120873-120908 | 36 | MF498773 | Aeromonas phage AS-szw, complete genome | 75697-75732 | 11 | 0.694 |
| NC_012440_1 | 1.1|120873|36|NC_012440|PILER-CR | 120873-120908 | 36 | MF448340 | Aeromonas phage AS-zj, complete genome | 181318-181353 | 11 | 0.694 |
| NC_012440_1 | 1.1|120873|36|NC_012440|PILER-CR | 120873-120908 | 36 | MH791404 | UNVERIFIED: Aeromonas phage Assk, partial genome | 187785-187820 | 11 | 0.694 |
| NC_012440_1 | 1.1|120873|36|NC_012440|PILER-CR | 120873-120908 | 36 | MF498774 | Aeromonas phage AS-yj, partial genome | 62334-62369 | 11 | 0.694 |
| NC_012440_1 | 1.1|120873|36|NC_012440|PILER-CR | 120873-120908 | 36 | MN871442 | UNVERIFIED: Aeromonas phage Aszh-1, complete genome | 172072-172107 | 11 | 0.694 |
| NC_012440_1 | 1.2|120946|34|NC_012440|PILER-CR | 120946-120979 | 34 | NZ_KR611317 | Rickettsia endosymbiont of Ixodes pacificus strain Humboldt plasmid pREIP, complete sequence | 99135-99168 | 11 | 0.676 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NC_007103 | Bacillus cereus E33L plasmid pE33L466, complete sequence | 126135-126168 | 11 | 0.676 |
| NC_012440_2 | 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR | 1254701-1254734 | 34 | NZ_CP009967 | Bacillus cereus E33L plasmid pBCO_1, complete sequence | 196040-196073 | 11 | 0.676 |
| NC_012440_4 | 4.2|1302450|39|NC_012440|PILER-CR,CRISPRCasFinder,CRT | 1302450-1302488 | 39 | NZ_MG205641 | Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence | 3524-3562 | 11 | 0.718 |
| NC_012440_4 | 4.2|1302450|39|NC_012440|PILER-CR,CRISPRCasFinder,CRT | 1302450-1302488 | 39 | NZ_MG205642 | Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence | 3524-3562 | 11 | 0.718 |
1. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to AP014380 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S43-C70, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.853
ctccattttcttttcctccttttttgtt--tgatcg CRISPR spacer taccattttctttttctccttttttgtttctgat-- Protospacer . ************.************* ****
2. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 6, identity: 0.824
ctccattttcttttcctccttttttgtt--tgatcg CRISPR spacer atccattttcttttcctcctttttttctactggt-- Protospacer ************************ .* **.*
3. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 6, identity: 0.824
ctccattttcttttcctccttttttgtt--tgatcg CRISPR spacer atccattttcttttcctcctttttttctactggt-- Protospacer ************************ .* **.*
4. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 6, identity: 0.824
ctccattttcttttcctccttttttgtt--tgatcg CRISPR spacer atccattttcttttcctcctttttttctactggt-- Protospacer ************************ .* **.*
5. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 6, identity: 0.824
ctccattttcttttcctccttttttgtt--tgatcg CRISPR spacer atccattttcttttcctcctttttttctactggt-- Protospacer ************************ .* **.*
6. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to JQ680368 (Unidentified phage clone 2204_scaffold14 genomic sequence) position: , mismatch: 7, identity: 0.794
ctccattttcttttcctccttttttgtttgatcg- CRISPR spacer ttccattttcttttcctgctttctt-tctgggcgt Protospacer .**************** ****.** *.**. **
7. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040462 (Enterococcus sp. M190262 plasmid pM190262, complete sequence) position: , mismatch: 8, identity: 0.765
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer attcattttcttttcttccttttttgtatcctaa Protospacer *.************.*********** * * .
8. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 8, identity: 0.765
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer ttccatttacttttcctccttattttgtttttct Protospacer .******* ************ *** ** **
9. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 9, identity: 0.735
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer atccattttttattcctccttttttatataaaat Protospacer ********.* *************.* *.*
10. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 9, identity: 0.735
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer atccattttttattcctccttttttatataaaat Protospacer ********.* *************.* *.*
11. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024844 (Streptococcus iniae strain FP5228 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer ttccattttcttttcctcttttttttgattttta Protospacer .*****************.****** * *..
12. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to MN176230 (Bacillus phage 056SW001B, complete genome) position: , mismatch: 9, identity: 0.735
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer cgtcattttgttttcctccttttgtgttttgata Protospacer * .****** ************* ***** . ..
13. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NC_048797 (Bacillus phage vB_BmeM-Goe8, complete genome) position: , mismatch: 9, identity: 0.735
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer gaacattttcttttcctcctttattcttttaata Protospacer ******************* ** *** * ..
14. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023350 (Escherichia coli strain ETEC-2264 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer cttcattttcttttccttctttttcttacaataa Protospacer **.**************.******. * ..** .
15. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024241 (Escherichia coli O114:H49 strain 90-9280 plasmid unnamed1) position: , mismatch: 9, identity: 0.735
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer cttcattttcttttccttctttttcttacaataa Protospacer **.**************.******. * ..** .
16. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024238 (Escherichia coli O15:H11 strain 90-9272 plasmid unnamed) position: , mismatch: 9, identity: 0.735
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer cttcattttcttttccttctttttcttacaataa Protospacer **.**************.******. * ..** .
17. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to KM359505 (Prochlorococcus phage P-TIM68, complete genome) position: , mismatch: 9, identity: 0.735
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer gtcatttttcttgtcctccttttttgctttagat Protospacer ** ******* *************.** *
18. spacer 1.2|120946|34|NC_012440|PILER-CR matches to MN693296 (Marine virus AFVG_25M162, complete genome) position: , mismatch: 10, identity: 0.706
ataggatcaatctcaactacatcttttttaaaca CRISPR spacer gacccagcaatctcaactccatctcttttaatta Protospacer . * *********** *****.****** .*
19. spacer 2.9|1254637|35|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021525 (Acetobacter ascendens strain SRCM101447 plasmid pAP1447-1) position: , mismatch: 10, identity: 0.714
aggactggttacctgtcttttttcttatttttttg CRISPR spacer
tttttttcttatttgtcttttttcttattttttcg Protospacer
.* ***..********************.*
20. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045289 (Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 plasmid pCff2, complete sequence) position: , mismatch: 10, identity: 0.706
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer ccttcttttcttttcctccttttcttttttcttc Protospacer *... ******************.* *** *.
21. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045289 (Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 plasmid pCff2, complete sequence) position: , mismatch: 10, identity: 0.706
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer ttccctttccttttcctcctttttttcctccttt Protospacer .*** ***.**************** ..* *.
22. spacer 1.1|120873|36|NC_012440|PILER-CR matches to MT713136 (Aeromonas phage AP1, complete genome) position: , mismatch: 11, identity: 0.694
tttctgttttttgcttttcatatatttcttttattc CRISPR spacer taagcattttttgcttttaatgtatttctttttggt Protospacer * ..************ **.********** .
23. spacer 1.1|120873|36|NC_012440|PILER-CR matches to MH791398 (UNVERIFIED: Aeromonas phage Asswx_1, complete genome) position: , mismatch: 11, identity: 0.694
tttctgttttttgcttttcatatatttcttttattc CRISPR spacer taagcattttttgcttttaatgtatttctttttggt Protospacer * ..************ **.********** .
24. spacer 1.1|120873|36|NC_012440|PILER-CR matches to NC_048674 (Aeromonas phage AS-sw, partial genome) position: , mismatch: 11, identity: 0.694
tttctgttttttgcttttcatatatttcttttattc CRISPR spacer taagcattttttgcttttaatgtatttctttttggt Protospacer * ..************ **.********** .
25. spacer 1.1|120873|36|NC_012440|PILER-CR matches to MF498773 (Aeromonas phage AS-szw, complete genome) position: , mismatch: 11, identity: 0.694
tttctgttttttgcttttcatatatttcttttattc CRISPR spacer taagcattttttgcttttaatgtatttctttttggt Protospacer * ..************ **.********** .
26. spacer 1.1|120873|36|NC_012440|PILER-CR matches to MF448340 (Aeromonas phage AS-zj, complete genome) position: , mismatch: 11, identity: 0.694
tttctgttttttgcttttcatatatttcttttattc CRISPR spacer taagcattttttgcttttaatgtatttctttttggt Protospacer * ..************ **.********** .
27. spacer 1.1|120873|36|NC_012440|PILER-CR matches to MH791404 (UNVERIFIED: Aeromonas phage Assk, partial genome) position: , mismatch: 11, identity: 0.694
tttctgttttttgcttttcatatatttcttttattc CRISPR spacer taagcattttttgcttttaatgtatttctttttggt Protospacer * ..************ **.********** .
28. spacer 1.1|120873|36|NC_012440|PILER-CR matches to MF498774 (Aeromonas phage AS-yj, partial genome) position: , mismatch: 11, identity: 0.694
tttctgttttttgcttttcatatatttcttttattc CRISPR spacer taagcattttttgcttttaatgtatttctttttggt Protospacer * ..************ **.********** .
29. spacer 1.1|120873|36|NC_012440|PILER-CR matches to MN871442 (UNVERIFIED: Aeromonas phage Aszh-1, complete genome) position: , mismatch: 11, identity: 0.694
tttctgttttttgcttttcatatatttcttttattc CRISPR spacer taagcattttttgcttttaatgtatttctttttggt Protospacer * ..************ **.********** .
30. spacer 1.2|120946|34|NC_012440|PILER-CR matches to NZ_KR611317 (Rickettsia endosymbiont of Ixodes pacificus strain Humboldt plasmid pREIP, complete sequence) position: , mismatch: 11, identity: 0.676
ataggatcaatctcaactacatcttttttaaaca CRISPR spacer gcagtatcaatctctactacatctttcgtcccat Protospacer ..** ********* ***********. *
31. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 11, identity: 0.676
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer cattcatttcgtttcctccttttttatttgtaac Protospacer * .. **** **************.****
32. spacer 2.10|1254701|34|NC_012440|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 11, identity: 0.676
ctccattttcttttcctccttttttgtttgatcg CRISPR spacer cattcatttcgtttcctccttttttatttgtaac Protospacer * .. **** **************.****
33. spacer 4.2|1302450|39|NC_012440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 11, identity: 0.718
gtatcttcttctgcttctatataagatatagttttacca CRISPR spacer aaatctttttctgcttctatattagatataaaatcgact Protospacer . *****.************** *******. *.. *
34. spacer 4.2|1302450|39|NC_012440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 11, identity: 0.718
gtatcttcttctgcttctatataagatatagttttacca CRISPR spacer aaatctttttctgcttctatattagatataaaatcgact Protospacer . *****.************** *******. *.. *
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DBSCAN-SWA_1 |
703651 : 718841
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >NC_012440|703651:718841|DBSCAN-SWA GATGGGCGACAAAACAGCAGAAGTAGAAAAGTTAAGGTCAGAAATAGAAAGATTAAAGAAGCAGATAGAGGAGAAAAATAGATATAAAACTATTGTTGAAAATGCAGGGGAGGCTATAGTTATACTTCAGGGCGGGTATATGAAATATCTGAACCCGAAAGCGGCCTCTCTTGTGGGAATACCTAGGGAAAAACTGCTGAACTCAACATTTGAACAGTTCATACATCCTGAAGACAAACAGATGGTCCTTAATAACTATATAAACAGACTTCAGGGGAAGCCAGCACCTGAAAGCTATACTTTCAGAATCAGGGATATAAACTTACAGACAAAATGGCTCCAGATAAGACCTGTTAAGATAACCTATGAGGGCAAACCTGCTATACTCAATTTCTTCATTGATATAACAAAGCAGAAAGAGTTAGAAAAGATACTTGAAAAAACTAACTCTATACTGAGATGGACTATAGAATCCCTTTCAGACGGTATTGTTGTTGTTGATCTTAATTTCAACATAATTCTTTACAACCAGAACTTCCTGAATATATGGGGAGTTAAGGATGAGGATCTGGAAGATACAACGAGATTTTTATACATCGCTTCAAAAAAAGTGGTATATGAGAAGATGTTTTTAAAAAGGATCGATGAGCTCAGAAAGGATATTTATGCATCCGGTAAAGGCAGATTAACACTTCTCAATGGAAGGATATACGAATGGTATTCAATCCCTTTTAAGGTTCAGAACAGGGTTTCTGGAAGGATATGGCATCTAAAGGATATAACAGAAAAGATACAGGCTGAAGCAGCTTTAAGGGAAAGGGAAAAGAACTACAGGGAGCTTGTTGAGAACGTGAACAGTATAGTTCTAAGATGGAAGCCTGATGGAACCATAACATTCATAAACAGGTTTGGTGAAAAGTTCTTCGGTTATAAAAGAAAGGAGCTTATAGGAAAGAATGTCTGCGATACTATTGTACCGCAGTGTGATTCTGAAGGTAACAACCTTCACCAGATGATAGAGGATATAACCAGAAATCCAAACAGGTATGTTAACAATGAGAACGAAAATATGACAAAAGATGGAAAAAGGGTTTGGATACTATGGAAGAACAGACCAGTATACGACTCAGATAATAATCTTATAGAGATATTTTCCATAGGACACGATATCACAGAGAAAAAGATACTGGAGAAAAAGCTTGAGAAACTCGCAACAACAGATGGTCTTACAGGTATTTATAACAGGGTAAAATTTGAGGAGATACTCGAGGAAAAACTGAGAGATTTCTCTTTAAACGGATCAAAATTCTGTCTTTTCCTTTTTGATATAGACAACTTTAAGAAGATAAACGACAGCTATGGCCATCATAGGGGAGACCATGTTTTAAAAGAGGTGGTAAACGTTGTTAGAAGAAGTTTGAGAAATGACAGTCTTTTTGCAAGGTGGGGTGGTGAGGAGTTTATAATTCTTTTCCCTAATACTGATCTGAAAAGCTGTTTTCACGTTGTTGATGGTATCAGGAAGATGATATCCAGACATGTGTTTGATGTTGTCGGAAGAATAACGATAAGCGGCGGTATTACAGAGGTTTTAGAAGGTGATGATTCAGTTTCTATAGTGAGAAGGGCTGATAATCTGCTTTATAAGGCAAAAGGTAGTGGAAAGAATATTGTTATGGCAGGGTAGCCACAGGGCTACCCTCATTTTTAGTTCACCTCAGGTTCAATAACGTCGTCGTCACCTTTCTTTCCTTCAGACTGCTGAGCTCCAGACTGGTAAAGTTTCTGAGCTATCTTGTTTGCAACGGATGTTACCTTATCTATAGCTGACTGTATCTTTCCTCTGTCATTTGAAGCTATGGCATCTTTTCCTTCCTTGATCACACTTTCAGCCTCTTTTACATCCTCATCTGACAGTTTACCCTTGTTCTCATTGATGGTTTTCTCAAGACTGTAGACGAGGGCATCAAGCTGGTTTCTCAGCTCAACGGTCTCCTGGAACTTTTTATCTTCCTCTTCATGTTTTTTAGCTTCCTCTATTATTCTGTTTATCTCATCTTCAGTTAATCCTGAAGACTGCTGAACAGTTATAGACTGTGATTTTCCTGTTGCTTTATCTGTTGCTGTAACATGCAGGATACCATCAGCATCTATATCAAAGCACACCTCAATCTGTGGAACTCCCCTTGGTGCAGGTGGTATGTCTGTCAGGAAGAACTTTCCAAGTGATTTATTCTCCTTGGCCATTTTTCTCTCACCCTGTAGAACATGTATCTCAACCTGTGTCTGGTTGTCAGCTGCTGTTGTGAATATCTCACATTTCTTTGTTGGTATAGGAGTGTTTCTTGGTATAAGAACAGTCATAACACCACCAAGTGTTTCTATACCGAGTGAGAGAGGTGTAACATCTATAAGAAGAACATCTTTAACCTCACCTGCCAGAACACCACCCTGTATAGCAGCACCTATAGCAACAACCTCATCAGGGTTAACACCTTTGTGAGGTTCTTTTCCGAAGAACTCTTTTATCTTCTGCTGTACAAGTGGTATTCTTGTTGATCCACCAACGAGAACAACATCATCTATATCGGCTGGTGTGAGTTTCGCTTCCTCAAGGGCTCTTTTGACAATATCCATAGTTCTGTCAACAAGATCTTTTATCATCTCTTCAAGTCTCGCCCTTGTCAGCTTTTTCTCAAGGTGTAAAGGCTGATTTGTGTTAGGATCTATTGTTATGAAAGGAAGGTTTATCTCCGTTTCCATCTTGAATGACAGCTCTTTCTTTGCCTGTTCTGCTGCTTCTTTTAATCTCTGGAATGCTGTCTTGTCCTGTTTAAGATCTATACCGTGATCCTTCTTAAACTCCTCTAAAAGCCAGTTTATTATTCTCGCATCTATATCAGAACCACCAAGATGTGTATCACCATCTGATACCTTAACTTCTATTACGCCATCTCCACCTTCAAGAATTGATACATCAAAAGTACCACCACCAAAGTCGTAAACAAGTATCTTAACGTCGGATTTTTTGTCTAATCCATAAGCTAGAGCTGCCGCTGTTGGTTCGTTGATTATTCTCTTAACTTCAAGTCCAGCTATCTTACCTGCATCTTTTGTAGCCTGTCTCTGTCTCTCATTAAAGTATGCTGGAACTGTAATAACAGCTTCTGTAACTTTCTCACCAAGGTAGTTCTCAGCTGCCTCTTTAAGTTTCTTTAATACCTGTGCTCCAACCTCTTCAGGTCTTACAATCTTTCCTGCATTTGGAACATCAAATGCAGCGTCTCCTTTATCGTCTGATACAACTTTATAAGGAACATGTTTTATCTCTTCCTGAACCTCGTCATACTTTCTTCCTATAAATCTTTTTGATTCGTATATAGTATTTTCAGGATCAAGGACAGCTCTTCTTTTTGCAGGATCACCTACAAGTATCTCCCCTTCCTTTGTCCATGAGACTATTGATGGTGTTGTTCTGAATCCTTCCTGGTTTGCTATTACAACAGGCTCTCCTCCCTGTATAACTGAAACAACTGAGTTAGTAGTTCCAAGGTCTATTCCTATTACCTTTCCCATTAATCGGTACCTCCTTTTTTATTCTCTCATAAAAAATATAATATTTTAGTTAATCATTGTCAAGATTTTTTATATTATTACACATATATTTTTCAGTTTGATCTAAATGCCGAAAAGTTAAAAAAATACTCAGGGAGCTAAGATGAGGATAGCTTACATAAATTTTTTAATAGAAGGTGATAATTACAGGGCAGGAGTTCTTCTTACAGATGAAACTACAAAACCTGTAGAGTTCAGAATTACTACAAATCTTAATATTGATCAGCTCCAGGAGATACTCTATGGGGAATCTCTTAAAGAGGTTCTATATAAAGAAAGATTTACAGTCCAGCTTTTAGATTCTCTTCAGGAAGATTACGATATAGTTCTTGTTAAGGAAAAATCTCTCCTTTCTATAAGGAAGGAGATCAAGAAACCTGTTGTACATATCCAGAAGTACGAGTACTTCATGCCTTTGAACAGACAGAGTCATAAGATAATAAATCTACAGGAGAAGTATGAACCTTTATACATAACTATATCCTCTCAGGATGAAAACAGACTCGTTTCTATATCACAACAGCTTAACGAGATATATAAAAACTTTAACATTATGGAACCTTTTGACCGAATAGAAAAAGCGATAAAATACCTTTCAGAGAAGGGTCAGTGATGATTGATATATCTGGAAATCTGGTTAAAGATATTGAGGTGAATACAGTATCTCTCTTTAACGATTCTATATGTGGGGTTTCTGAGAATCTTGTAAAGCCGATCCCAACAGTTAAAAATATAGGAAAGATATTTATTAAAAAAGATAAAGATATTAATAAAATATTAAATGGCGACTTTAAATCAGTTAAACTGACGAAGAGGGAGTATAAAAATCTATCCATCTTTGATCTTATAAAACCTGTTCTGATGCCATCCATAGATTTTGATATACCTCAGGATCTAACATTCCCACACAGACTTTTCAACTACCAGATACAGGGGATAAAGTTCCTTATAAGCAACAGATCAGCACTTCTTGCTGACCAGATGGGAACAGGAAAAACTGTTATGTCAACGACAGCTCTCAGAATCTTATTTATGAAGGGAGATGTAAAGAAAGCTATCATAATAGTTCCGTCAAACCTTATCTCAGTATGGGAAGAACATCTGAATCTATGGGCTCCGGAGATACAGTTTGTAACTATAAGGGATAGTAAAGAAGGCAGAAAAGTTCTGTGGAACATAGACTCCCATGTTTACCTTATAAGCTATGACAGCTTAAAAAACGATTACAAACATTATAAAGATTATCTTGGAAAGTTCAGAATCACTCTGGATCTTGTAATAATAGATGAAGCCCACAATATAAAAAATCCTTCTGCTTTAAAAACAAAGGCCGTTAAGTTTATATCAAGACTTTCCAGATATAAGTGGGCTTTAAGTGGAACACCTCTCCAGAACAACCTGAAAGAACTTCTCTCACTTTACGAGTTTCTCTTCCCTGATAAACAGAGAAAGGAGAGTATATCTGAGGAGGAGGCAAGGGAGCTTATCAGACCTGTTATGCTCAGAAGACTTAAAAAGGATGTTCTTAAAGAGCTTCCTGAAAAATTACCTCCAGAGATAGAGAAATTTGATCTATCACCTTCACAGCAATTAGAGTACGATTCGATTCTTGGAAGGGAGATAGAGAAAATAGAGGACATTATAGATAAATACAGAGATGAGAAGAACTTCAAATTTATACTTAAACAGAATATCATACACTCTATCCAGAAACTTAGACAGGTATGTAATTTCCCCTCTAAAGGTTTTGACAGTCCAAAGATGGCGAGACTGAGGGAGATAATAATAGAACTTATAAAAAATGATGAAAAGGTTATAGTTTTCACAAACTTTGTTAAATACGGGATAGAAAGGATAGTTAACAATCTTTCCTATTACATCAATCCAGATTATATAGTCCAGTACCACGGTGGGATGAGACCTGAGGAAAAGATAAAAGCTGTAAAGGATTTTAAGGAAAAGAAGAATAAGTATGTATTTATTGGTACTATTACTTCTGCGGGAGAAGGTCTGACATTAACAGAATCAAGTTATGCTATATTTTTTGATCTCCACTGGAATCCTGCAAAGATATGGCAGGCTGAGGACAGGATTCACAGAATAGGTCAGAAGAACAAGATTAATATATATAACTTTGTGATGAGAAATACAGTTGAGGAGAGGATACTCCAGAAGTTAGAGGAGAAAAGGGCTATGATACAGAATGTTATAGATGGAATAGAAAAACCTGTTGATGAGATGGTAACAGTTGATGATCTTATGGAGTTTATTGGAATAAATCTGAAATCCGTTCCAGCTTAAGGAGGGAGGTATGCACAGACCTAAGGTAGAACCTAAAAATATAGAATCTGTATTTTTACCTGATGAGATGTTCTTTTCCACTACGGATCTTAAAGGTATAATTCTGTCAGGTAATGATGTTTTTATCAGAGTAAGTAAGTTCTCTAAGGAAGAACTTATAGGAAAACCCCACAACATTATCAGACATCCAGATATGCCCAGAATAGTCTTTAAGCTTCTGTGGGATTATATACAGTCTGGAAAGCCGATAGTTGCCTATGTAAAAAATATAGCAAAAGACGGCAGTTACTACTGGGTTCTTGCCACGGTTGTTCCTATCTTTGATAATGAGGGAAATATAGAAAAGTATCTTTCTATAAGGATAAAACCGACAACACAGTTTTTTGATCATATACCAAAGGTTTACGCTGAACTTCTCAATGCTGAAAAGTCCGGAGGTATGGAAGCATCATTAAAAAAACTTGAAGAGATAGTAAGATCTTTAGGTTATAAAAGCTATGACAGCTTTATGACAGACATTTTAAGCAAAGAGATAGAGGATAAAAAAGATGTTCTTAAGGTAGAAGATATTCCACCAGATATGATCTTTGAAAACAGTTTTACAGAGAATGTGGCAACAATATTCAGGTATGCGAAAAAGATTGATGAGCTGTATGACAGCATATACAGGAAGATCACTCATTTTGAGAACCTCGGAAAGCTTCTTGATGAAAAATCAGACAGAATATTCAGTCTTACAGATGATATAAGACTTATATCACTGAACTCCTCAGTTGAGTCTTTCAAACTTGGAAGTCAGGGAGCATCCTTTTCTGTTCTCTCTGCTGAGATGAGGAAGAACTCAGAGGTAGGGAATAAAATAATAGACGAGATGAGAAAGATAACAGAGATAATTATGGAAGATATAGACAGGATAATCCTTCTGATAAACATATCAAAGCTTGAAGTTATAGCTATAACAAAATTTTTACACTCTATACTTGAGGAGGATGAAACCAGAGAAGATAATGATATAGAAGAGCTTGAGCAGAATATTATTGATCTTGTCAGATCATTAAAGATATCTTCAGAAAAAACATATTCTTACTCTGAAAAGATGGGACATCATCTATTGAACATCTCCGAGTATCTTAAAAAGCTGAAGATCCTTATAAAAAGGCTTGAGTTTCTTTACCTTAATGGTATGGTAGAATCAGCTCACCAGACAGAAACAAGCTTTTCTATAATATTTACAGAGGTAAACAAACTCGTTGAGAGTACAAAAGATATACTTAACGATATATCAGTTCCCCTATCTGAGGTCAAAGATGAAAACAGAAATCTAAAGTACGAGCTTGAAGAGGTTGAGTATAATATTAATAAGATTACAGATACCATATCAAATATATCAAATGTTTAGGGGAGATTGGATGAAAGTTGAGTATATAGTCGTTTTTATAACAGTTCCAGACAGTAAAACAGCAAATAATATAGCTAAAAAACTTGTTGAAGAAAAATTAGCAGCCTGTGTAAATATAGTCAAGGATATAAACTCCATTTACTACTGGAAAGGTAATATAGAAAATGATGATGAGCTTCTTCTTATTGTAAAAACAAGGCTGGAGATCTTTGAGAAGCTCACTGATTTTGTTAAAAAGATACATCCTTACACAGTTCCTGAGGTAATAGCACTTCCTATTATAGCCGGTTCAGATTCCTATCTTAAATGGATAGATGATACTCTTTACAGGTAAGTATTTGCTACACCTGATTTTATGCTGTAATATAATCCCATAATGAGACTTATAAAAGAGCTTTTAACAGTTTTAGTATACCTCGTAGTTTTTACAATCGCTGTCGGGGGATTTGATCTTTTACCAGAAATACTGAGTTTTTTAAAGGGGTTGGGCATGGCACCATCAATAATAGTTTTGGTAATACTGATAATCATATTTTTAGCGGCAGCAATAAGAATACTTCCTGAATACGAGAGAGGTGTTGTTTTCCGTCTTGGTAGGGTTATTGGTGCAAAAGGACCTGGACTTATAATCCTTATCCCTTTCATAGATAAGATGGTGAGGGTTTCTCTAAGGGTTGTAACACTTGATGTTCCAACTCAGGATATTATAACGAAGGATAACGTTTCTGTTAAGGTTGATGCTGTTGTTTACTTCAGGGTTATAGACCCTGTTAAGGCTATAGTTAATGTTGAGGACTATGTTTATGCGATATCCCAGCTTTCACAGACAACACTTAGAAGCGTTTGTGGTCAGGCTGAGCTTGATGAGCTTCTATCACAGAGGGACAAACTGAACCTGAAGCTTCAGGAAATAATAGACAGGGAGACGGATATATGGGGTGTGAAGGTTGTTTCCGTTGAACTTAAGAGAATAGATCTTCCTGAAGAGCTTGTTAAGGCTATGGCAAGACAGGCTGAAGCTGAAAGGGAGAGAAGGGCTAAGATAATAGGTGCAGAGGCTGAGTATCAGGCCGCTCAGAAACTTGTTGAGGCTGCAGAACTTCTATCAAAACAGCCTATAGCTATGCAGCTGAGATATCTTGAAACACTAACAACAATAGGACAGAAAAACGCAAAAACTATAGTCTTCCCATTCCCAACAGAGATGCTTGAGTTTTTAGATAAATTCAAGAAAACCGACTAAAAACTGGATTTTAAAGATCCTCTCGCTTTTTTTGATCTTATAATCTGATCAGTTCTTCAATTGGTATTGCATAATTTTCTATCAGGTATTATATTTATAACCAAACACTAAAGAAATTTTATAACACTAAGCTAATATTTAAGGAGGAAAGGATGTTCAGTGAGAATCTACTGGATAAGAAATCAAGGGAGCTTATAGATCTATCAAAAAGTATCGCACAGAAGCAGGGGGATAAGCTTGTTGATACAGACCATCTGCTCCTTGCACTCATATCTAAGAAAGACTCCCCTTTAATTAAGATACTTGAAAAAAGAGGTATAGATACAGAGGATCTTGTAAATAAGATTGACAGTTATCTGAAGGATCTTTATTCACAGATAAACAGATCTGTTACAGAGTATATAAACTACATAAAAGATCTTCAGAGACAGCTTACAAAGGTTAGAAACGATCTTATAAATATACAGGAAGAGTTAAAAAGGGTTTCAGCTGAGAAAAGGGAGCTTGAGAATGAGTTGAGATACGAGGAAAGCTCCTTCTGGGGTGGTTTTGGAAGCTCTGTAAGGATTGAGTACGAAAGGCTGAAAAGGTATGAAGATCAGCTGAGAAGCCAGATAGACCAGATTAAAAGATCACTGCTACAGGTAATGGATGAGAAAACTGCAGAGGCTTTTATTTCAGGCAATATAACGCTCTCAGCTGTTTTATACAGAGTTATAGAGAACTCAGATCTGGTAAAACAGATTGATGATCTGGGATTTTCGCCTGACAGGGTTGTTGTAAAAATATCTCAGGAAGCTCTCGGAACTGAGACAGGTAAGATCTACAGTAATAAATTTATAAAAGTACTTGAAACCGCAGAGAAAAAGGCTTTATCCTCAGGTGAGACTCAGGTAAAGCCTTACCATATAGCATCTGCACTTATAGAAGATGAGACAACTATCGCAGGAAAAATATTAAAACAAATACTGTCAGGAGGAAAAGAGAAGATGAATGGAGAAAATATCCAGAAAGAGATGGCTGAAGAAGAAAAATCACCACTGGAAAAATTTACAGTGGATCTTACAGCTTTAGCAAGGGAGGGAAAGCTTGATCCGGTTATAGGAAGAGAAAAAGAGATTCAGCAGGTTATAGAGGTTCTTCTAAGAAGAACAAAAAACAACCCTGTCCTCGTAGGTGAGGCTGGTGTTGGTAAGACAGCTATAGTTGAAGGTCTTGCCCAGAAGATAGTAAATAAAGAAGTTCCAGAGGAGCTTTATGACAAGAAGATACTTGCACTTGATATGGGAGCATTACTCGCTGGAACAAAGTATAGGGGTGAGTTTGAGGAAAGACTTAAAGGGATTATAGATGAGATAAAGAATGATGGAAATGTCATTCTCTTTATAGATGAGCTTCATACAATCGTTGGAGCCGGTGCTGCTGAAGGAGCTACAGATGCAGGTAATCTTCTGAAGCCTTCACTTGCAAGAGGTGAGATAAGGGTTATTGGTGCCACAACTATAGATGAGTACAGAAAACATATAGAAAAAGATCCTGCACTTGAGAGAAGATTCCAGCCTGTTTATGTGGAAGAGCCTGATGTTGAGACAACCATTGAGATACTGAACGCTCTCAAGCCAAGACTTGAGAAACACCATGGGGTAAAGATAGATCCTTCAGCTATAGAAGCTGCTGCAAAGCTCACACACAGGTATGTTACAGACAGAAAGCTTCCTGATAAAGCTATAGATGCACTGGATCAGGCATGTGCAAGGAAAAAGCTCAAGCTCGTTTACGCTCCACCTGAGGTGATAGAGATAGAGAGAAAGATAAAGATGCTTGATGAACAGATAGTTCAGGCTTCTCTGGAAGGTGATTATGAGAAGGAAGCCCAGCTTAAGATAGAAAAAGCAAAGCTTGAGAAAGAGCTTAAAGAGGTTATGTCAAAATCGGACAGTGAGCATCTGAAACTTGATCAGCTTAAGAAACAGCTTGAGGAGCTTGAGAGAAGAATAATAGAGACAGCTGAAAAAGGAGACTACGAGAAAGAGACAGAGCTTAAGATAGAGAAGGCAAAACTTGAGAAACAGATAAAAGAGCTTGAGCTTAAGATAGCTGAGAAAACTGTTGTTTCTGAGGATGATGTTGCTGAGGTCATATCAGACTGGACAGGTATTCCAATATCAAGACTGAAAGAAGAGGAGATGCAGAGACTTTTAAGACTTGAGGAAGAACTGCATAAGAGGGTTGTTGATCAGGAGCATGTTATAAAAACTGTTGCAGAGGCTATAAGAAGAGCAAGGGCTGGACTTTCTGACCCAAGAAAACCTTTAGCATCATTTATGTTCCTTGGTCCAACAGGTGTAGGTAAAACAGAGACGGCAAAAGCACTTGCGGAGGTTCTTTTTGGAGATGAGGATGCACTTATAAGACTTGATATGTCAGAGTTTAAAGAGGAACACTCTGTCGCCAAACTTATTGGAGCACCTCCAGGATATGTAGGTTATGAGGAAGGTGGTAAACTTACAGAGGCTGTAAGAAGAAAGCCTTACTCAGTCATACTCCTTGATGAGATAGAAAAGGCACATCCAAGGGTTTTTGATGTGTTCCTCCAGGTTCTTGATGATGGAAGACTTACAGACTCAAAAGGAAGAACTGTTAACTTCAGGAATACGATCATCATAATGACATCAAATATAGGAAGTCAGTACCTCACATTGATACCTTTTGATGCTCCAGATGATGTTGTGGAAAAGGAGTTTGAGTCAGCGAAACAGAAGGTTTTAGATGAGGTTAAAAATTACTTCAGACCTGAGTTCTTAAACAGGCTTGACGATATACTTGTATTCAAACCACTTCTGAAGAATGAGCTACTCCAGATCGTGGATATGATGCTAAAGCTCCTGAACGCAAGACTTAGAGACAGGGATATTCATCTTGAGGCTACAGATAAAGCGAGGGAGCTTATATCAAAACTTGGATACGATCCTGTTTACGGAGCAAGACCTCTCAGAAGGGCTATACAGAAGTATGTTGAAACACCACTTTCTGAAAAGATACTCTCAGGTGAGGTAAAACCTGGGGATACAGTTGTTCTTGATGAGGAGAACGGTCAGCTTGTTTTCAGAGTAAAACAGGAAGCAGAAGCCAGGTCATAAAAAGGGGGCTTTAAGCCCCTTTTAACTCTCTTTCAGTCTTTTTATCTTCTTCTTTAGATCATTCAGGAAAACAAGAGCTTCTACCGGTGTTATACTTCCTATGTCTATACTCTCTATCTCTTCCAGTATCTGTCTGTACTCATCTTTCTCAATATCTTCTATCTCTTTAAAAAGTGGAAGCTCATTTATCTCATTAAGGTAACTGTTTTCCTTCTGTTTAAGTGAGTATATATCTTCCTCAAGTTTTTTATCCCTCTGCTCCTCAAAGTAGTAAAGTATCTCGTATGCTCTTTTTATTATCTGTTCTTTAATCCCTGCAAGTTTTGCAACATGGACACCGTAACTTTTATTGCTGAAACCTTCCTTAACCCTGTATAAGAATTTTATATTTTCTCCATCCTCAAATATGTCCATATGGAAGTTCTTAACACCTTTTATCTCCCTCTCAAGCTGTGTAAGCTCGTGGTAATGCGTAGCAAATAATGTTTTCACCTTTACCTTTTCAGCGAGATACTCAGATATAGCCCATCCTATAGACAGTCCGTCATACGTACTTGTTCCCCTTCCTACCTCATCTAATACGATAAAACTTCTCTCAGTAGCATTGTTTACTATATTCGCCATCTCAAGCATCTCAACCATAAATGTTGATAGACCTTTGGCAAGGGCATCACCTGATCCTATCCTTGTGAAGATAGCATCAACAACACCTATCTTTCCTTTTTTCGCAGGTATGTAAGATCCTGTCTGTGCAAGGAGAATGATTATCGCTGACTGTCTTATAAATGTGCTTTTACCTGCCATATTTGGTCCTGTGATTATATGAAAGTATGAGTTTCTGTTCATCTTAAGGTTATTTGGAACGAAATCAGGCATAAACTCTTTTATAACAGGATGGTATCCCTCTTTTATCTCTATCTCGTAACCGTCGTGTATATCAGGTTTCGTCCATCCCTTCTCAACAGCTATCTGTGCAAGTGACTGGATAGCATCTATCATCCCAACCTGCTGGGCTGTTTTTCCTATTCTGTCTGACAGGAATGCAACCTCTTCCCTTATTCTCATGAATATCTCATACTCTAATGCTTTTATCTTCTCATCTGCAGAGAGTATCTTTTCTTCAAAACTTTGAAGTTCATCAGTTATAAATCTCTCAGCATTTGATAATGTCTGTCTTCTTCTGAAATGATCTGGAACAAGCTTGAGGTTTGGCTTCGTTACCTCTATGTAGTATCCCATAACTTTGTTAAATCCTATCTTTAGACTCTGTATCCCTGTCTCTTTTCTCAGTTTTTCCTGGTAGCTTTTTAGCCATTCATTACCTTTTTCTTTTATCTCCTTCAGCTCATCAAGATCTTTATCAACACCTTTCTTTATAAGACCTCCTTCCTTAAGATGTATAGGTGGATCATCCTCAAGGTATCTATCAAGTTTCTCAATAAGCCAGCTGTAATCCTCTATCCTTTCAAATGACTCTTTCAGCAGATCTGATTTTATCTCTTTTGATATCTCCTTCAGTTTTGATACCTTCTTTAATGACTCCCTCAGCCCAACAAGGTCCCTCGGTGTTGATGTGTTTGAGGATATCTTTGAGATAAGCCTTTCTATATCAAATATCTGATCAAGTATATCCCTTATCTTTTCCCTTAACTCAGTATTCTCAACAAGCTCTGTTACAGCGTTCTGTCTTTTTATTATCTCCTTACTGTTTTTAAGGGGATGTAGGAGGAAAAATCTTAACTTTCTCCTTCCCATTCCTGTTAATGTTCTGTCCATAACCCTCAGAAGAGGTATATTCCCCTCATTTGGGCTTACTATCTCAAGATGTTTCTGTGCAGAGTAGTCAAGTCTTACATAGCTGTCTTCCCTGTAGGGCTTTGGTGTTGATATAAATGGGAGAAATGATTTCTGTGTTACCTTCGCATACTTCCATACAGCTGATAGGGGATATATAACATTCTGTTCTTCTGTGTCAAAACCAAAAGCAGATATATGTCCTGTTTTGAAAAATCCCAGAAACTCAGAGTGTGTATCCTCACTGAAGTAATCTTCAGGGAGCTGAGAGAAAAATATACTTTTAAACTGTGATCTTAGATCTGAAAAATCATACCCTTCCTGAACAACGATCTCTTTTGGCTGGAATTTTCCTATAAAGGATATAAGCTCATCCCTGTTTAGACTGCCTCCAGTGAACTCTCCTGTAGAAAGATCAAGGTAGGCTATATAAAACCTTCCCCTCTCCTGATATATCCCAAGGAGAGCGCTTTTCAGCTTTTCGTTCTCAAAATATGTTCCAGGTGTGAGAACCCTGATAACATCCCTCTTTACAATACCTTTAGCCTTTGAAGCATCTTCAAGCTGTTCACAGATAGCAACCTTGTAGCCTTTTGATACAAGTCTTGTTATATAGCTGTCAGCGGAATGGAAGGGGATACCACACATAGGTATGTATCTGTCCTTTCCTACCTTTTTCTTTGTCAGAACTATGTTCAGTTCCCTTGCTCCCGTATGGGCGTCCTCATAGAACATCTCATAAAAATCACCAAGTCTATAAAGAACAAGGGCATCAGGATACTGATCTTTTATTTTGTGGTACTGGGCTAACATAGGTGTTATATTCTTTTCTTCCTTCAACCTGTACCTCTGATCTTTTTTTAATATTATCCTACTCTAAAAAGATAATATCCAGAGCAAGCTCAGGATCAACCCTCTGATCGTTTATATAAATACCAAAATGAAGGTGAGGTGCTGTTGATCTTCCTGTTGATCCTACCTTTCCTATTATCTGTCCAGCTTTTACAAAGCTTCCTTCCTTTACACTGATCTCAGAAAGATGGGCATAAAGTGTAAAAAGTCCAAGCCCGTGATTTATTATGACTGTGTTTCCTGTAAAAAACAGATCCCTTGCTATCTCAACCTTTCCTGAAAGGGAGGCGTAAACAGGCGTTCCTTCAGCTGCCCTAAAGTCTGTTCCCCAGTGTATTGATCTTTTCTTCCCGTTTATAATTCTTTTTGCTCCAAAAGGCGTGGTTACATAAAGTTTATCAAGAGGTGGATAAAATGAGCTTTCATCAAAAAGCTTCTGTGAGTACTTTCTGAATATCTTTCTAAGCAAAAAGTACTCTTTTTCTATTCTCTTTAATACTTCTTTTGTTCTCTTTCTCTCCTTTACCCTTATCTTTGAGACGGGGTAAGATTTTCTGCTCACAGATATAAACTTCCTGTATATGACTCTGCCGTCTTTCAGCAGATTTACCGTTATAACAGATGAGCTTTTATAAGGGACAGCGAAGAAAGCTATACTGTCCTTTACTGGAAATCTGTAAGTTTTACTGCCGGACTCAATCTCTATCGTATACTCTGAATTTCTTTCAAAGCTGTTTATCTTTATATAGTTTAATGATCCCGGATATACAGACTCAGAGTATATACTTATATCTGAAGCGTAGGATGTCAGGGATAAAATAAGGAGAAAAACAGCTACAGCTAACAT
Protein sequences of DBSCAN-SWA_1 >NC_012440|703651:718841|709576_710965_+|WP_012675327.1|DBSCAN-SWA MHRPKVEPKNIESVFLPDEMFFSTTDLKGIILSGNDVFIRVSKFSKEELIGKPHNIIRHPDMPRIVFKLLWDYIQSGKPIVAYVKNIAKDGSYYWVLATVVPIFDNEGNIEKYLSIRIKPTTQFFDHIPKVYAELLNAEKSGGMEASLKKLEEIVRSLGYKSYDSFMTDILSKEIEDKKDVLKVEDIPPDMIFENSFTENVATIFRYAKKIDELYDSIYRKITHFENLGKLLDEKSDRIFSLTDDIRLISLNSSVESFKLGSQGASFSVLSAEMRKNSEVGNKIIDEMRKITEIIMEDIDRIILLINISKLEVIAITKFLHSILEEDETREDNDIEELEQNIIDLVRSLKISSEKTYSYSEKMGHHLLNISEYLKKLKILIKRLEFLYLNGMVESAHQTETSFSIIFTEVNKLVESTKDILNDISVPLSEVKDENRNLKYELEEVEYNINKITDTISNISNV >NC_012440|703651:718841|715369_717982_-|WP_012676827.1|DBSCAN-SWA MKEEKNITPMLAQYHKIKDQYPDALVLYRLGDFYEMFYEDAHTGARELNIVLTKKKVGKDRYIPMCGIPFHSADSYITRLVSKGYKVAICEQLEDASKAKGIVKRDVIRVLTPGTYFENEKLKSALLGIYQERGRFYIAYLDLSTGEFTGGSLNRDELISFIGKFQPKEIVVQEGYDFSDLRSQFKSIFFSQLPEDYFSEDTHSEFLGFFKTGHISAFGFDTEEQNVIYPLSAVWKYAKVTQKSFLPFISTPKPYREDSYVRLDYSAQKHLEIVSPNEGNIPLLRVMDRTLTGMGRRKLRFFLLHPLKNSKEIIKRQNAVTELVENTELREKIRDILDQIFDIERLISKISSNTSTPRDLVGLRESLKKVSKLKEISKEIKSDLLKESFERIEDYSWLIEKLDRYLEDDPPIHLKEGGLIKKGVDKDLDELKEIKEKGNEWLKSYQEKLRKETGIQSLKIGFNKVMGYYIEVTKPNLKLVPDHFRRRQTLSNAERFITDELQSFEEKILSADEKIKALEYEIFMRIREEVAFLSDRIGKTAQQVGMIDAIQSLAQIAVEKGWTKPDIHDGYEIEIKEGYHPVIKEFMPDFVPNNLKMNRNSYFHIITGPNMAGKSTFIRQSAIIILLAQTGSYIPAKKGKIGVVDAIFTRIGSGDALAKGLSTFMVEMLEMANIVNNATERSFIVLDEVGRGTSTYDGLSIGWAISEYLAEKVKVKTLFATHYHELTQLEREIKGVKNFHMDIFEDGENIKFLYRVKEGFSNKSYGVHVAKLAGIKEQIIKRAYEILYYFEEQRDKKLEEDIYSLKQKENSYLNEINELPLFKEIEDIEKDEYRQILEEIESIDIGSITPVEALVFLNDLKKKIKRLKES >NC_012440|703651:718841|718013_718841_-|WP_012675490.1|DBSCAN-SWA MLAVAVFLLILSLTSYASDISIYSESVYPGSLNYIKINSFERNSEYTIEIESGSKTYRFPVKDSIAFFAVPYKSSSVITVNLLKDGRVIYRKFISVSRKSYPVSKIRVKERKRTKEVLKRIEKEYFLLRKIFRKYSQKLFDESSFYPPLDKLYVTTPFGAKRIINGKKRSIHWGTDFRAAEGTPVYASLSGKVEIARDLFFTGNTVIINHGLGLFTLYAHLSEISVKEGSFVKAGQIIGKVGSTGRSTAPHLHFGIYINDQRVDPELALDIIFLE >NC_012440|703651:718841|705357_707226_-|WP_012676519.1|DBSCAN-SWA MGKVIGIDLGTTNSVVSVIQGGEPVVIANQEGFRTTPSIVSWTKEGEILVGDPAKRRAVLDPENTIYESKRFIGRKYDEVQEEIKHVPYKVVSDDKGDAAFDVPNAGKIVRPEEVGAQVLKKLKEAAENYLGEKVTEAVITVPAYFNERQRQATKDAGKIAGLEVKRIINEPTAAALAYGLDKKSDVKILVYDFGGGTFDVSILEGGDGVIEVKVSDGDTHLGGSDIDARIINWLLEEFKKDHGIDLKQDKTAFQRLKEAAEQAKKELSFKMETEINLPFITIDPNTNQPLHLEKKLTRARLEEMIKDLVDRTMDIVKRALEEAKLTPADIDDVVLVGGSTRIPLVQQKIKEFFGKEPHKGVNPDEVVAIGAAIQGGVLAGEVKDVLLIDVTPLSLGIETLGGVMTVLIPRNTPIPTKKCEIFTTAADNQTQVEIHVLQGERKMAKENKSLGKFFLTDIPPAPRGVPQIEVCFDIDADGILHVTATDKATGKSQSITVQQSSGLTEDEINRIIEEAKKHEEEDKKFQETVELRNQLDALVYSLEKTINENKGKLSDEDVKEAESVIKEGKDAIASNDRGKIQSAIDKVTSVANKIAQKLYQSGAQQSEGKKGDDDVIEPEVN >NC_012440|703651:718841|712360_715348_+|WP_012676151.1|DBSCAN-SWA MFSENLLDKKSRELIDLSKSIAQKQGDKLVDTDHLLLALISKKDSPLIKILEKRGIDTEDLVNKIDSYLKDLYSQINRSVTEYINYIKDLQRQLTKVRNDLINIQEELKRVSAEKRELENELRYEESSFWGGFGSSVRIEYERLKRYEDQLRSQIDQIKRSLLQVMDEKTAEAFISGNITLSAVLYRVIENSDLVKQIDDLGFSPDRVVVKISQEALGTETGKIYSNKFIKVLETAEKKALSSGETQVKPYHIASALIEDETTIAGKILKQILSGGKEKMNGENIQKEMAEEEKSPLEKFTVDLTALAREGKLDPVIGREKEIQQVIEVLLRRTKNNPVLVGEAGVGKTAIVEGLAQKIVNKEVPEELYDKKILALDMGALLAGTKYRGEFEERLKGIIDEIKNDGNVILFIDELHTIVGAGAAEGATDAGNLLKPSLARGEIRVIGATTIDEYRKHIEKDPALERRFQPVYVEEPDVETTIEILNALKPRLEKHHGVKIDPSAIEAAAKLTHRYVTDRKLPDKAIDALDQACARKKLKLVYAPPEVIEIERKIKMLDEQIVQASLEGDYEKEAQLKIEKAKLEKELKEVMSKSDSEHLKLDQLKKQLEELERRIIETAEKGDYEKETELKIEKAKLEKQIKELELKIAEKTVVSEDDVAEVISDWTGIPISRLKEEEMQRLLRLEEELHKRVVDQEHVIKTVAEAIRRARAGLSDPRKPLASFMFLGPTGVGKTETAKALAEVLFGDEDALIRLDMSEFKEEHSVAKLIGAPPGYVGYEEGGKLTEAVRRKPYSVILLDEIEKAHPRVFDVFLQVLDDGRLTDSKGRTVNFRNTIIIMTSNIGSQYLTLIPFDAPDDVVEKEFESAKQKVLDEVKNYFRPEFLNRLDDILVFKPLLKNELLQIVDMMLKLLNARLRDRDIHLEATDKARELISKLGYDPVYGARPLRRAIQKYVETPLSEKILSGEVKPGDTVVLDEENGQLVFRVKQEAEARS >NC_012440|703651:718841|707368_707878_+|WP_012675439.1|DBSCAN-SWA MRIAYINFLIEGDNYRAGVLLTDETTKPVEFRITTNLNIDQLQEILYGESLKEVLYKERFTVQLLDSLQEDYDIVLVKEKSLLSIRKEIKKPVVHIQKYEYFMPLNRQSHKIINLQEKYEPLYITISSQDENRLVSISQQLNEIYKNFNIMEPFDRIEKAIKYLSEKGQ >NC_012440|703651:718841|710975_711299_+|WP_012676405.1|DBSCAN-SWA MKVEYIVVFITVPDSKTANNIAKKLVEEKLAACVNIVKDINSIYYWKGNIENDDELLLIVKTRLEIFEKLTDFVKKIHPYTVPEVIALPIIAGSDSYLKWIDDTLYR >NC_012440|703651:718841|707898_709566_+|WP_148206441.1|DBSCAN-SWA MVKDIEVNTVSLFNDSICGVSENLVKPIPTVKNIGKIFIKKDKDINKILNGDFKSVKLTKREYKNLSIFDLIKPVLMPSIDFDIPQDLTFPHRLFNYQIQGIKFLISNRSALLADQMGTGKTVMSTTALRILFMKGDVKKAIIIVPSNLISVWEEHLNLWAPEIQFVTIRDSKEGRKVLWNIDSHVYLISYDSLKNDYKHYKDYLGKFRITLDLVIIDEAHNIKNPSALKTKAVKFISRLSRYKWALSGTPLQNNLKELLSLYEFLFPDKQRKESISEEEARELIRPVMLRRLKKDVLKELPEKLPPEIEKFDLSPSQQLEYDSILGREIEKIEDIIDKYRDEKNFKFILKQNIIHSIQKLRQVCNFPSKGFDSPKMARLREIIIELIKNDEKVIVFTNFVKYGIERIVNNLSYYINPDYIVQYHGGMRPEEKIKAVKDFKEKKNKYVFIGTITSAGEGLTLTESSYAIFFDLHWNPAKIWQAEDRIHRIGQKNKINIYNFVMRNTVEERILQKLEEKRAMIQNVIDGIEKPVDEMVTVDDLMEFIGINLKSVPA >NC_012440|703651:718841|711341_712208_+|WP_015898948.1|DBSCAN-SWA MRLIKELLTVLVYLVVFTIAVGGFDLLPEILSFLKGLGMAPSIIVLVILIIIFLAAAIRILPEYERGVVFRLGRVIGAKGPGLIILIPFIDKMVRVSLRVVTLDVPTQDIITKDNVSVKVDAVVYFRVIDPVKAIVNVEDYVYAISQLSQTTLRSVCGQAELDELLSQRDKLNLKLQEIIDRETDIWGVKVVSVELKRIDLPEELVKAMARQAEAERERRAKIIGAEAEYQAAQKLVEAAELLSKQPIAMQLRYLETLTTIGQKNAKTIVFPFPTEMLEFLDKFKKTD >NC_012440|703651:718841|703651_705337_+|WP_012675655.1|DBSCAN-SWA MGDKTAEVEKLRSEIERLKKQIEEKNRYKTIVENAGEAIVILQGGYMKYLNPKAASLVGIPREKLLNSTFEQFIHPEDKQMVLNNYINRLQGKPAPESYTFRIRDINLQTKWLQIRPVKITYEGKPAILNFFIDITKQKELEKILEKTNSILRWTIESLSDGIVVVDLNFNIILYNQNFLNIWGVKDEDLEDTTRFLYIASKKVVYEKMFLKRIDELRKDIYASGKGRLTLLNGRIYEWYSIPFKVQNRVSGRIWHLKDITEKIQAEAALREREKNYRELVENVNSIVLRWKPDGTITFINRFGEKFFGYKRKELIGKNVCDTIVPQCDSEGNNLHQMIEDITRNPNRYVNNENENMTKDGKRVWILWKNRPVYDSDNNLIEIFSIGHDITEKKILEKKLEKLATTDGLTGIYNRVKFEEILEEKLRDFSLNGSKFCLFLFDIDNFKKINDSYGHHRGDHVLKEVVNVVRRSLRNDSLFARWGGEEFIILFPNTDLKSCFHVVDGIRKMISRHVFDVVGRITISGGITEVLEGDDSVSIVRRADNLLYKAKGSGKNIVMAG |
10 | Bacillus_virus(12.5%) | NA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
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