CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_011831	Chloroflexus aggregans DSM 9485, complete genome	40 crisprs	c2c9_V-U4,csa3,cas4,cas2,cas1,cas6,cas3,cas5,cas7,cas8b2,WYL,DEDDh,csx1,csm3gr7,csx19,csx10gr5,cas10,csx3,csx15,Cas14u_CAS-V,DinG,cas14j,c2c10_CAS-V-U3,csm2gr11,csm4gr5,csm5gr7,cmr3gr5,cmr5gr11,cmr6gr7,cmr4gr7	37	40	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_011831_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_1

544374-544487

Orphan

Consensus_repeat	Method
ATCAGGCCACCCCCACCTATTGCGGCGACTACGCTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_1

>merge|NC_011831|1|544374-544487|CRISPRCasFinder
ATCAGGCCACCCCCACCTATTGCGGCGACTACGCTATGTAGACGAGATGTATGACGGTACGGTGTCAGTAAGCAGCGATCAGGCCACCCCAACCTATTGCGGCGACTACGCTAT

>NC_011831|1|1|544374-544487|CRISPRCasFinder
ATCAGGCCACCCCCACCTATTGCGGCGACTACGCTAT	GTAGACGAGATGTATGACGGTACGGTGTCAGTAAGCAGCG
ATCAGGCCACCCCAACCTATTGCGGCGACTACGCTAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_041470851.1\|542100_543024_+\|bstEII	unknown	unknown	unknown
NC_011831.1\|WP_012615744.1\|536723_538238_+\|4-alpha-glucanotransferase	unknown	unknown	gnl\|CDD\|237738
NC_011831.1\|WP_012615745.1\|538219_539398_-\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|234608
NC_011831.1\|WP_157044908.1\|546371_547184_-\|ligase	unknown	unknown	gnl\|CDD\|319742
NC_011831.1\|WP_041470324.1\|530990_531977_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224005
NC_011831.1\|WP_012615746.1\|539418_540459_-\|type-2-isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl\|CDD\|235465
NC_011831.1\|WP_012615756.1\|554497_554971_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|238207
NC_011831.1\|WP_012615753.1\|550804_551722_-\|DUF4032-domain-containing-protein	unknown	unknown	gnl\|CDD\|379077
NC_011831.1\|WP_012615751.1\|547180_548302_-\|winged-helix-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377630
NC_011831.1\|WP_012615754.1\|552030_552663_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277348
NC_011831.1\|WP_012615742.1\|533055_534552_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226364
NC_011831.1\|WP_012615743.1\|534651_535893_-\|BMP-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380618
NC_011831.1\|WP_012615758.1\|555918_556287_-\|glyoxalase	unknown	unknown	gnl\|CDD\|319937
NC_011831.1\|WP_012615755.1\|552738_554211_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|274368
NC_011831.1\|WP_012615741.1\|532018_533044_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226962
NC_011831.1\|WP_012615752.1\|548298_550779_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379080
NC_011831.1\|WP_012615749.1\|545068_546247_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NC_011831.1\|WP_012615739.1\|529701_530916_+\|glycogen-synthase	unknown	unknown	gnl\|CDD\|273997
NC_011831.1\|WP_041470850.1\|540621_541989_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NC_011831.1\|WP_012615757.1\|555023_555590_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012615743.1\|534651_535893_-\|BMP-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380618	cd19963, PBP1_BMP-like, periplasmic binding component of a basic membrane lipoprotein (BMP) from Brucella abortus and its close homologs in other bacteria. Periplasmic binding component of a family of basic membrane lipoproteins from Borrelia and various putative lipoproteins from other bacteria. These outer membrane proteins include Med, a cell-surface localized protein regulating the competence transcription factor gene comK in Bacillus subtilis, and PnrA, a periplasmic purine nucleoside binding protein of an ATP-binding cassette (ABC) transport system in Treponema pallidum. All contain the type 1 periplasmic sugar-binding protein-like fold.	8.89012e-56
NC_011831.1\|WP_012615744.1\|536723_538238_+\|4-alpha-glucanotransferase	gnl\|CDD\|237738	PRK14508, PRK14508, 4-alpha-glucanotransferase; Provisional.	0
NC_011831.1\|WP_012615745.1\|538219_539398_-\|DNA-replication/repair-protein-RecF	gnl\|CDD\|234608	PRK00064, recF, recombination protein F; Reviewed.	2.09118e-119
NC_011831.1\|WP_157044908.1\|546371_547184_-\|ligase	gnl\|CDD\|319742	cd16443, LplA, lipoate-protein ligase. Lipoate-protein ligase A (LplA) catalyzes the formation of an amide linkage between free lipoic acid and a specific lysine residue of the lipoyl domain in lipoate dependent enzymes, similar to the biotinylation reaction mediated by biotinyl protein ligase (BPL). The two step reaction includes activation of exogenously supplied lipoic acid at the expense of ATP to lipoyl-AMP and then transfer to the epsilon-amino group of a specific lysine residue of the lipoyl domain of the target protein.	9.49649e-18
NC_011831.1\|WP_041470324.1\|530990_531977_-\|ABC-transporter-permease	gnl\|CDD\|224005	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only].	7.28047e-79
NC_011831.1\|WP_012615746.1\|539418_540459_-\|type-2-isopentenyl-diphosphate-Delta-isomerase	gnl\|CDD\|235465	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional.	0
NC_011831.1\|WP_012615756.1\|554497_554971_+\|glutathione-peroxidase	gnl\|CDD\|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	8.68503e-89
NC_011831.1\|WP_012615753.1\|550804_551722_-\|DUF4032-domain-containing-protein	gnl\|CDD\|379077	pfam13224, DUF4032, Domain of unknown function (DUF4032). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 170 amino acids in length. The family is found in association with pfam06293.	7.20215e-06
NC_011831.1\|WP_012615751.1\|547180_548302_-\|winged-helix-DNA-binding-domain-containing-protein	gnl\|CDD\|377630	pfam06224, HTH_42, Winged helix DNA-binding domain. This family contains two copies of a winged helix domain.	1.49779e-42
NC_011831.1\|WP_012615754.1\|552030_552663_-\|metallophosphoesterase	gnl\|CDD\|277348	cd07403, MPP_TTHA0053, Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.91927e-34
NC_011831.1\|WP_012615742.1\|533055_534552_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226364	COG3845, COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only].	7.43601e-151
NC_011831.1\|WP_012615752.1\|548298_550779_-\|hypothetical-protein	gnl\|CDD\|379080	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.	1.23273e-11
NC_011831.1\|WP_012615758.1\|555918_556287_-\|glyoxalase	gnl\|CDD\|319937	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins. BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping.	1.785e-24
NC_011831.1\|WP_012615755.1\|552738_554211_-\|HAMP-domain-containing-protein	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	7.41756e-71
NC_011831.1\|WP_012615741.1\|532018_533044_-\|ABC-transporter-permease	gnl\|CDD\|226962	COG4603, COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only].	3.41047e-58
NC_011831.1\|WP_012615749.1\|545068_546247_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.10712e-70
NC_011831.1\|WP_012615739.1\|529701_530916_+\|glycogen-synthase	gnl\|CDD\|273997	TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NC_011831.1\|WP_041470850.1\|540621_541989_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	4.91563e-22

>NC_011831.1|WP_041470851.1|542100_543024_+|bstEII
MSISRKYFAEPDSSQRAKRFADYKPEASLWITLATGDYYPDILQDARNLYSPVIELFGQLLKQSASSQELLLRISKISQTWMRIQLLRVFRKYVNLSLPVEMTKRKSGILQIIQTFGSRFRSIPEVQKAYNSRPTPDEALCALLWEYKDRGKKGYDLTERFFELFRARFPNLIIEGPIRAGRDILMGDIVANYPNPTRPIDFVIYEQGKTSILAIGLARYDSDRGGAQEDDWPGQYRSLIDEVLNYAHAHQLNIKIILLNDGPGLLLGSMWDDYSKLEDSYPNKVMVLTLRMIPERLHLAWLHTPAS
>NC_011831.1|WP_041470850.1|540621_541989_+|FAD-binding-oxidoreductase
MHADVVICGAGIAGVALAHELAIVHGWHNVVLIEAGAPLTLTSDKSTECYRNWWPDDAMMALMNRSIDRLEEIALASRNRIRLNRRGYLYATADPQRATQWHLQAERAAQRGVGPLRIHQSTQSAYQPISHDWREAPDGIDLLLDPSLIRRHFPDLKPATIAVLHTRRCGWFSAQQLGAMLLEDARFAGVRLVHGRVSAVAQRGRRVTAVTVATPGGSEQIATPCFVNAAGPHLATVSELLGLDLPVHNQLHLKAAFADTLGVVPRTAPLLIWGDPVELAWSEEERAELGTDPKTAWLTAPLPAGVHCRPEGEGSSQQVLVLWDYHPHDPTARTAHFPIPLDDTFFEIALRGMATMLPGLQAYVERLPRAYLDGGYYTCTPENRPLIGPLPLDGAFVIGALAGYGIMAALAAAELLAAHITGSPLPSYASAFHPARYDDPAYQVQIATWGETGQL
>NC_011831.1|WP_012615746.1|539418_540459_-|type-2-isopentenyl-diphosphate-Delta-isomerase
MPGDDRTESRKVDHIRIVLNEDVAAKGVVTGFAAYRLPHRALPELDLNEVDTRTTFLGKPIAAPLLISSMTGGTASAEKINLTLAEAAEYLGLPMGVGSQRAAVMDPRLASTYQVRRVAPRIPLLANVGAVQLNYGFTVDHCRRAVEMIEADALILHLNPLQEAVQPEGDVNFKGLLNKIEEVCRRLEVPVVVKEVGNGIGAADAIRLYEVGVRIIDVAGAGGTSWSEVERFRQPNDTGRRVASAFADWGLPTTECVREVRAALPDVTLIASGGVRSGVDVAKAIALGADLAGTARPALFDAINERGAEAVIEGLSAFIRELRVAMFCSGCANLSELRNLRLGMRP
>NC_011831.1|WP_012615745.1|538219_539398_-|DNA-replication/repair-protein-RecF
MYIHHLALRDFRNYRRQDVALSPTTILLYGPNAAGKTSLLEAIFYLATTRSPRLSSDRDLVRWDAVGEAGAPPFARIAADVERRIGPVRLEILVQRRLDDGGQPLNGAQKLVRIDKRPARAIDLIGQLRVVLFTPTDVMLVDGPPAERRRYLDITLSQLDPHYVRTLAYYQKILLQRNSLLRAWREQRRLPRNVDAELGYWDQELAAAGGYLLAERLRAVVELSALAGSIYRKISGGEHELQIEYIASCDLDAARDAGSLAERLRLAFAAQRTDELARGQTLCGPHRDDLVFNVAGVNLGRYGSRGQQRTIALALKIGEAELMQQRGGDAPVLLLDDVLSELDNRRRMHLLDLILRPQQQTLLTATNLSDFSADFLAAARRFRVEDGQLFAG
>NC_011831.1|WP_012615744.1|536723_538238_+|4-alpha-glucanotransferase
MQFQRASGILLHPSSLPGPWGIGDLGPMAYRFVDFLVAAGQSLWQVLPLGPTGYGDSPYQCFSAFAGNPLLISIDDLIEHNLLTVDEARAALGYLPAERVDFGSLIPAKQTLLRQSFERFRSSRGTPLHQAYTRFCLENAEWLADYALFMAIKEAQGGGSWHNWPPDLRDRKPEALARIRRDLAVKIDFHQYVQFLFFRQWQSLKEYANQQGVIIIGDAPIFVADDSADVWAHRDLFYVDAQGMPTVVAGVPPDYFSTTGQRWGNPLYRWDKMAMTGYRWWVARMRQALTLYDVLRLDHFRGFEAYWEVPASAPTAVEGRWVKGPGADLFHVLHAELGDLPIIAEDLGLITPEVEKLRLAFGLPGMKVLHFAFGDNPNNPYLPHNYTTNYVVYTGTHDNDTTVGWFNTLDPAGRAAVLTYLGRDEQTVDIAWDLMRLGMMSVANYVITPLQDVLRLGSEARMNMPGRLGGNWAWRFSADALQEELVALLRKLTYTYGRLQPAKS
>NC_011831.1|WP_012615743.1|534651_535893_-|BMP-family-ABC-transporter-substrate-binding-protein
MRNQGVRWLLLVIMLFSLILTACGTQPTAAPTTAPAAEPTTAPAASAEEFTFGMVLVGPINDGGWNQAHYEGAQYVVEKLPDVKFIYIDKVNPADRPNVKVEQVIEELIGQGAKLVITNSAEFADGTNIAAAAHPDVFFIHASGDKVLTGEAPSNVRNLMGRMEYGKMIAGCAAALTTEAGKLAYLGPLIDPETRRLVNSTYLGARYCWETYRGRPASELAFKVTWIGFWFNIPGVTLDPTKVANDFINEGYDVILSGIDTTEAIVEANKATQAGKRVFAVPYDFKGACAQGEAVCLGVPYFNWGPDYKRLVELARSGKWEPAWEWTGPNWSNLNDPDTSMIGFVKGPALSAENAAKLDEFIAKLADGSLNLFTGPLYYQDGSVFVPEGQVADDKTIWYTQQLLAGIEGQSAP
>NC_011831.1|WP_012615742.1|533055_534552_-|ATP-binding-cassette-domain-containing-protein
MQITVEHLTKRFGAVCANDQLSISFASGQIHGVLGENGAGKSTLMKLLAGYLRPDEGQIRFNGVVQRLRGPGDALAAGVGMVHQEPLDIPAFTVIENLLCAAPPGVFRSRRAAEMVLRELSAQLGFTVDPTARIEQLTVGQRQQVEIMRLLLCGAQVLILDEPTTGITAAQARALFAALRQIAAEGRTVLFVSHKLEEVAELCDTVTVLRNGRVVPPGQLPMPQPQEYLLSLMFGDAGTASSVYRPLPTIDAPPVWELKHVTVRSGMLQLVDLNHRFTAGRIIGLAGLDGSGQQVLLRLLAGQLVPERGQVLVNGRDLSGAGPLVFRQAGIEYLPADRLHDGMIGALSLTDHFALLQRNGVLIDRRRAEELARQAIAEYQIKATPITPIAALSGGNQQRAMLALIPPDARGILAEQPTRGLDVASARAIWSRLQARRDDGCCVVFASPDLDEIMEYSDEVIVCFAGRIGPPIPRALLSAGRLAELIGGVGFEALVATA
>NC_011831.1|WP_012615741.1|532018_533044_-|ABC-transporter-permease
MERGSFPVRQLTGATRFLLVLAAAFAFTTVALLSTGVSPLEVYRLVLFGAFSTPVRLSDMMMLAAPLLLCATGLTITFAGGLYNLGVEGQMIVGAIAAMVPLRLWPDWPPLLLWLLAGLSGMTGGALWAMLIGVLRRYAGVSEIFAGLGMNFLASGLALYMVLGPWRRQTSASLSGTELLPRELWLPTLDRLRLAPAAPVIAVIALGVVWWALTGTRWGLEVRAVGLNPAAAGRLGIATARRMGETLAACGALAGVAGMIQVVAVHHALIPNISSGIGLIGLLVALLARADPRWLLPISVAFATFTVGSIQLPLTLGIDSAIAGVLQGALVLFALAARVQK
>NC_011831.1|WP_041470324.1|530990_531977_-|ABC-transporter-permease
MDQLWIDLAAVLAAAAPLVIAAMGETISERAGVINLSLDGTMLLAAMTGFAVALTTNNLLLGFAAAALVGAVVAAVLGLFSLTLGQSQTAVGFVLALLCTDLSSFLGAPFVRLPGPTVPFSPIPGLADLPVLGTVFFQHDPVIYASFLIVPLTAYVLYYTRLGLIVRALGERPATAYARGVDVTRWRYAMLIIGGALVGIAGAAFSLDLKQGWSYRHTFGSGWIVLAIVIFGGWRPLRVALGCYLFAALEIFATRSQSALPDIPTQIVQVAPFVLMIFVLALVNLASSPAAMRWVATLPQLWQRPLLGAINRLRATAPAALGQPFERP
>NC_011831.1|WP_012615739.1|529701_530916_+|glycogen-synthase
MPELRRVAIFTNEYPPYIYGGAGVHVEYLSHALSRIVPVEVRCFGDQRVDDPNLTVRGYPRWEEARHNTDPRFAGAVDAVARSLAMAKDNLDASIVHCHTWYTDLAGLFASKLWDIPYVLTIHSLEPLRPWKVEQLGNAYHLSSWIERTAIEQANAVIAVSQETRSDILRLFNVDPARVHVIYNGIDLNEYRKTSATDALERYGVDPSRPFVLFVGRITRQKGIIHLVNAIPHIDPTAQVVLCAGAPDTEEIGHEMEERVAAVSAQRPGVIWIREMLPRQDVIQFYSHAAVFCCPSVYEPFGIINLEAMACETAVVASAVGGIKEVVVPEETGLLVDPNLKPGSFDPIDPVAFSADLAAAINRLLADPTLREQFGKAGRRRVEQVFSWDAIAQQTVALYRSLLP
>NC_011831.1|WP_012615749.1|545068_546247_-|serine-hydrolase
MRCLTIAISILAIIVLTACGQRDPIVSAWAPVGAQPTILPSVTPDPLLSASTPLVSVMEPVRPTPTPSLVDIATQIDLYLRDLTEKDQFRGSVLVATQGRILVARGYGQANVERDLPNTAQTRFRIASITKPFTALAIMQLQAASKLNVNESVCRYLPDCPVAWQPIMLHHLLSHTSGIPNYTDFPDFERVERSPVTPTQLAARFRNLPLDFAPGSAFRYGNSNYVVLGLVIEAVSGQSYADYVRDNIFAPAGMTNSGYDSGDATVLNGTVGYVGPGAERAIPIDTSNLYSAGGLYSTVEDLYRFVTALNSGQLLPAAELNQMYTPVRNNYGYGWKIEDRNGRTVIYHPGFISGAVTHLAYYPDTQSVVIVLSNMERTNADAIAATIGAMLP
>NC_011831.1|WP_157044908.1|546371_547184_-|ligase
MTSWRLLPPAQGDPASELAAGAAMLAGLATTPQPAIRWYAAAPQPALVIGSGQKVCEVDQAALANAGITLHRRASGGTAVLFVPGFLMQDIVLPADHPLAHPDVSESYRWLGEVWQATLAHFGVQADLITIAAARADRASLDPLVARACFGGWSPYELLVAGRKLVGFAQIRRREGLLFQVGVYTHWPGAQLADLLNIAASERQLLIDRLSARVTDLAAVCVKPPDLAALATAFATVLHQRYDVTITPSDWTAAELVAMAAAQNRFAPLG
>NC_011831.1|WP_012615751.1|547180_548302_-|winged-helix-DNA-binding-domain-containing-protein
MRKAIVELTIEQVAAARIVQNGLFKPFADPVTAARQLAGVQAQILPAAGLALWNRVPGLTNTQFEQLLYHERALVRLWGQRHTLHVYAAGDWPLIYAAQAGRVTSWELEMLRDGWDPAACEAFITRVAQWLYEHETMGRSDLRRLTPTIDERHLSGWGGIFSVLARRGLACHAAPHGGEARMAHRLRWLPDLAWHPPPTDEANAELMRRYLAAFGPAYPADITCWRGRTQAEIKRWLAMLGDEVVKVTVAGKPAWWLRCCVEHIRDLPVLADIPPRLLGRFDPLLLGTRDRSWLVDAVGYKQVWRPAGHVEATILLAGRVAGTWRYDWRGETLHVTLRPFTPLPPAVRSQLETLAAGVAAHFAAPLGECRWEE
>NC_011831.1|WP_012615752.1|548298_550779_-|hypothetical-protein
MRVVIRNHFLPTLYRWPAVWLPIALTGIAVLLLLLPISRPAHYWRVGEEYEPILIGFHENEQNETDLFRWSQPQAALFLYGYRGAPALVELRLAAPRAPGMAPAQATFAYQDGDVGTVTVAGYWRRYRLLVPAAATGETVLRWSTEPYIALPDVRELGVALSGVRQWSLADRPPLSAQTIAWSALPLLVWMAGVVWQWPGFWRDAGALLALAPALGLALAPATAEYWLPTVPWPWWPLLPIFVLLGWPYLRTGSRSLLNRTASRPVVHWTGVVIALGGLLLIRAGVLPWLIFPSVLIGVGLAWPLVANREDSSVWPSGRWLVAITGVALLTRLVALDQMPVALWRDESRHGLLALRIWSEPDFRPIYVPFVADLPALLFYLMAPVVGILGPHTWSVRLVSAVAGALTPLALYWFVAPIIGRRAAVLGAALLAWSSWSLSMSRWAFPATLDHLLVLTAAGLLWRGLDPNRRGWWIWCSVALAALLGGLAVYTYHTGRLAPLALAIVVLFRLGRNRERWRLTWSRLALAALVGAIVVMPLVWYLLTDSFGFNRRVGSVSIFQADSLSRHRPLDFLAENVVSYGLMWHIQGESNGRHHLPSAPMVDPVVGLLLLLGIGVAWRARSTAGVVLALWLLYYIPGLLSFNAPHAMRSLGTLAPACALAGWGLSRLATSVSWRRWLIPAALVASLALNLWVYFGLMWHDPRVYGEFDRTEMVMAQIVRNAATQPHPVPVYLPREWALSDTVRFLTADLAPAQQARIWRGSLVGDEDVLVVLPVSADATTVAGVLNALGSAGREVESPPTIPTGGEALVRVFARGTAALAVLSTP
>NC_011831.1|WP_012615753.1|550804_551722_-|DUF4032-domain-containing-protein
MSAIQAIVHDEFTRIRRDQMLRELLALITRRPNELLPLDEVRARLNVRGQHYLGHQTVPLDKIVGSEGRYSDFDRQFAPRHNANRLRWMNIDRAHHEGVPLPAVELYKLGDIYFVKDGHHRISVARFQGQREIDAVVTELVVDVPLDPNLSVRDLLLKEEYSDFLEWTGLADLRPEQRIEFSEPGGYLDLVRHINAHRYYLGQELGRPVTREEAVTSWYDNVYMPVIEVIRRQNALRYFPGRTEADLYRWIMDHRWYLRERNGGADPGPLVAASDYVRLFGRRSLTSLTDWLLGALRGKPAVGSS
>NC_011831.1|WP_012615754.1|552030_552663_-|metallophosphoesterase
MRTLTISDEVVPAVYSLNIKQRFADVRLVLACGDLPIYYLEFVVTMLGQPCFYVWGNHDAPEVQADGQVVSYARGAVCVEDRVVRHQGLLIGGLGGSIRYKPDGHHQYTETQMMFRVWRMVPRLVLNRLRYGRYLDVLLTHAPPLGIHNGPDYPHRGFRALLLLMQWFRPRYLIHGHIHLSYGFSHTTETQVGDTLVINTAGYRLLDLVV
>NC_011831.1|WP_012615755.1|552738_554211_-|HAMP-domain-containing-protein
MHWWRAKPIFSAIPFRVRLTLLYSSLFVLALIGISVGMHIAVAQTLHANVQRDLVAATQQIRSILNAVGLQGVRTPSGELQLYLNSDFIQLFTNRNIGAQFFRGDGTLVSSTPNLAPYMLPLPNEALNMNVTDENGLTIIREVNGVQVKSLITRVTLHNGQTIGFIQVSRPLNDVNDTLATLQTILIIGGVMATLVTGMGSMYLSKRALRPIEQITQTAQSIVRAEDLGRRIPEPVQRDEIHQLTVTINELLSRLERLFSTQQRFVADVSHELRTPLTVMQGNLEVLERGASTDPALVKEMVGDMRRETARLIRMVNDLLLLAQSETNVVLRSEPVELDTLLLEVFRELRPLANQVRLRIGAEDQILVYGDRDRIKQALLNLGVNALQYTPPGGLVILSLERYEQFACLSVADTGIGISEAERDLIFERFYRVDRSRSRHSGGTGLGLSIVKWVAEAHGGYVTVASEVGRGSTFAIYLPLPESPATSSTG
>NC_011831.1|WP_012615756.1|554497_554971_+|glutathione-peroxidase
MNVYDFSARTIDGVIQSLADYRGNVLLIVNVASYCGLTPQYGDLESLYRRYRERGLVVLGFPSNQFNQEPDDEETIKAFCIRTYAITFPLFAKIEVNGPNTHPLFAYLKAQQPGSSPDGEIKWNFTKFLVNRNGIPVRRYAPTDTIGSIERELVELL
>NC_011831.1|WP_012615757.1|555023_555590_-|hypothetical-protein
MFGTIVGAILLFFILSSPICGYLDSIAIKFVSLKIPDSVCIGRDKYTIAVKVGEIMVLGDSRVGVHFEAPDSGYYLFKYEAGAYTFHKYSSTQPTWTTGVNIVYGKEITWKNGGPENVVKRFADKGYFLSDTDAEIEAEGEMFKYYLKKGEIITFIAVDGYDTYSDNEGYVKISCYFVSEEHTVIKDN
>NC_011831.1|WP_012615758.1|555918_556287_-|glyoxalase
MFRYVVPKFPTANVTASVEFYKRTLGFVELFNYGDYAAVKRDAVEIHLWECQDKNIAENTACRIAVDNIEALYTEYQQAGVIHPNGDLEEKPWGGKEFVALDMERYSMIKKIRSLVQMDDVV

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Crispr_ID: NC_011831_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_2

688004-688483

Unclear

Consensus_repeat	Method
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CRISPRCasFinder
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	CRT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	PILER-CR

6 spacers

cas4,cas2,cas1,cas6,cas3,cas5,cas7,cas8b2,WYL

The CRISPR arrays of NC_011831_2

>merge|NC_011831|2|688004-688483|CRISPRCasFinder,CRT,PILER-CR
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAACCCGACTGCACGAATGCGTGCAACTCGGCGTCCGATGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAACTTGTACCTATCGTCGGATGATCCAAACCCTGGCCGCCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAACTCCGCGCGTTGGCGGCGGTCTGCGCGGTGCGGTGCGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAACCTCCATGCTCATCTTCCGTGATCGTCGTCATCAGCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAACTTGTACCTATCGTCGGATGATCCAAACCCTGGCCGCCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCCGGCAACCGGTGGGGTGACCGGCGCGGCAACCGGTGGTTTCAGTGCTCTACCGTGAGCCGAAAGTTCGGTGACC

>NC_011831|2|2|688004-688483|CRISPRCasFinder
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	CCGACTGCACGAATGCGTGCAACTCGGCGTCCGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	TTGTACCTATCGTCGGATGATCCAAACCCTGGCCGCCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	TCCGCGCGTTGGCGGCGGTCTGCGCGGTGCGGTGCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	CTCCATGCTCATCTTCCGTGATCGTCGTCATCAGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	TTGTACCTATCGTCGGATGATCCAAACCCTGGCCGCCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGGCAACCGGTGGGGTGACCGGCGCGGCAACCGGTG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTTCGGTGACC

>NC_011831|2|1|688004-688482|CRT
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	CCGACTGCACGAATGCGTGCAACTCGGCGTCCGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	TTGTACCTATCGTCGGATGATCCAAACCCTGGCCGCCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	TCCGCGCGTTGGCGGCGGTCTGCGCGGTGCGGTGCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	CTCCATGCTCATCTTCCGTGATCGTCGTCATCAGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAC	TTGTACCTATCGTCGGATGATCCAAACCCTGGCCGCCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGGCAACCGGTGGGGTGACCGGCGCGGCAACCGGTG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTTCGGTGAC

>NC_011831|2|1|688005-688408|PILER-CR
TTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAACC	CGACTGCACGAATGCGTGCAACTCGGCGTCCGATG
TTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAACT	TGTACCTATCGTCGGATGATCCAAACCCTGGCCGCCCG
TTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAACT	CCGCGCGTTGGCGGCGGTCTGCGCGGTGCGGTGCGG
TTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAACC	TCCATGCTCATCTTCCGTGATCGTCGTCATCAGCCG
TTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAACT	TGTACCTATCGTCGGATGATCCAAACCCTGGCCGCCCG
TTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012615866.1\|682886_683492_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|173926
NC_011831.1\|WP_012615867.1\|683546_684890_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223238
NC_011831.1\|WP_012615863.1\|679559_680483_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320696
NC_011831.1\|WP_012615870.1\|700946_701555_-\|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|273040
NC_011831.1\|WP_012615878.1\|710486_711440_-\|WYL-domain-containing-transcriptional-regulator	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NC_011831.1\|WP_012615879.1\|711510_711741_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|285479
NC_011831.1\|WP_012615876.1\|707352_708444_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NC_011831.1\|WP_012615872.1\|701814_702828_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
NC_011831.1\|WP_012615875.1\|706329_707079_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	COG1688_cas5_CAS-I	gnl\|CDD\|273860
NC_011831.1\|WP_012615865.1\|681919_682885_-\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213356
NC_011831.1\|WP_012615871.1\|701541_701799_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NC_011831.1\|WP_041470334.1\|680444_681926_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367929
NC_011831.1\|WP_012615869.1\|686398_687946_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012615868.1\|684965_685739_-\|inositol-phosphate-phosphatase	unknown	unknown	gnl\|CDD\|238821
NC_011831.1\|WP_012615874.1\|704018_706364_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NC_011831.1\|WP_012615873.1\|703038_704016_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NC_011831.1\|WP_012615877.1\|708643_710146_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cls000029_cas8b2_CAS-I-B	gnl\|CDD\|187796
NC_011831.1\|WP_012615862.1\|678381_679530_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012615859.1\|675583_676054_-\|response-regulator	unknown	unknown	gnl\|CDD\|381108
NC_011831.1\|WP_012615858.1\|673431_675531_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012615866.1\|682886_683492_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|173926	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.	2.4722e-06
NC_011831.1\|WP_012615867.1\|683546_684890_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|223238	COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism].	0
NC_011831.1\|WP_012615863.1\|679559_680483_+\|M48-family-metalloprotease	gnl\|CDD\|320696	cd07337, M48B_HtpX_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase. This HtpX family of peptidase M48 subfamily B includes uncharacterized HtpX homologs and consists of proteins smaller than Ste24p, with homology restricted to the C-terminal half of Ste24p. HtpX expression is controlled by the Cpx stress response system, which senses abnormal membrane proteins. HtpX participates in the proteolytic quality control of these misfolded proteins by undergoing self-degradation and collaborating with FtsH, a membrane-bound and ATP-dependent protease, to eliminate them. HtpX, a zinc metalloprotease with an active site motif HEXXH, has an FtsH-like topology, and is capable of introducing endoproteolytic cleavages into SecY (also an FtsH substrate). However, HtpX does not have an ATPase activity and will only act against cytoplasmic regions of a target membrane protein. Thus, HtpX and FtsH have overlapping and/or complementary functions, which are especially important at high temperature; in E. coli and Xylella fastidiosa, HtpX is heat-inducible, while in Streptococcus gordonii it is not.	1.57531e-10
NC_011831.1\|WP_012615870.1\|700946_701555_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.07125e-29
NC_011831.1\|WP_012615878.1\|710486_711440_-\|WYL-domain-containing-transcriptional-regulator	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	1.44878e-40
NC_011831.1\|WP_012615879.1\|711510_711741_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|285479	pfam08279, HTH_11, HTH domain. This family includes helix-turn-helix domains in a wide variety of proteins.	4.90073e-06
NC_011831.1\|WP_012615859.1\|675583_676054_-\|response-regulator	gnl\|CDD\|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	7.62168e-64
NC_011831.1\|WP_012615875.1\|706329_707079_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	3.76522e-30
NC_011831.1\|WP_012615865.1\|681919_682885_-\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213356	cd12822, TmCorA-like, Thermotoga maritima CorA-like family. This family belongs to the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the Thermotoga maritima CorA_like family are found in all three kingdoms of life. It is a functionally diverse family, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes three Saccharomyces cerevisiae members: two plasma membrane proteins, the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	6.39053e-125
NC_011831.1\|WP_012615871.1\|701541_701799_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.40989e-16
NC_011831.1\|WP_041470334.1\|680444_681926_-\|hypothetical-protein	gnl\|CDD\|367929	pfam04411, PDDEXK_7, PD-(D/E)XK nuclease superfamily. This domain has been identified as a member of the PD-(D/E)XK nuclease superfamily through transitive meta profile searches. The domain has two additional beta-strands inserted to the core fold after the first core alpha-helix. It has been speculated that it could function as s methylation-dependent restriction. The domain has two additional beta-strands inserted into the core fold after the first core alpha-helix. The PD-(D/E)XK signature is clearly conserved corresponding to an invariant PD (motif II) and DAK (motif III) motifs. There is also a conserved glutamic acid in motif I that is most likely to be involved in metal ion binding. The second core alpha-helix contains an invariant MHXYRD motif. It has been speculated that it could function as s methylation-dependent restriction enzyme.	2.00969e-22
NC_011831.1\|WP_012615876.1\|707352_708444_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	3.05997e-53
NC_011831.1\|WP_012615868.1\|684965_685739_-\|inositol-phosphate-phosphatase	gnl\|CDD\|238821	cd01643, Bacterial_IMPase_like_2, Bacterial family of Mg++ dependent phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate inositol monophosphate or similar substrates.	2.58217e-85
NC_011831.1\|WP_012615874.1\|704018_706364_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	3.03683e-68
NC_011831.1\|WP_012615877.1\|708643_710146_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.89428e-11
NC_011831.1\|WP_012615873.1\|703038_704016_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	0.00195716
NC_011831.1\|WP_012615872.1\|701814_702828_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.66107e-103
NC_011831.1\|WP_012615858.1\|673431_675531_-\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	1.5494e-107

>NC_011831.1|WP_012615869.1|686398_687946_-|hypothetical-protein
MNTSKLRGPLDTQLIIVGILVGLAIRLWIAWQPTDELSWRANADDAYYYFKLAQHLGSGVGATFDGVNLTNGFHPLYALLLVPIFQYAGSDIDLGVHLALTLVALVSSVTAWPIYLAGKYVHSPLAGTIGALTHLLNPWVVILTMTGVESAVYVCCFAWTVMVYVRWRSHKQSLRGIVLIGLPAGLTVMARSEGMFLLAGIILDRLVVDRHVPGRAVAFAVLSGLFTTIVCLPWVCWSVFQFGSPLQISASAIMLHNYAAMPADAVAAFEWYVGRVFWFLPRYGYKILLFNLPLVLLFGFVIGRSWLTRQRSLKIAWSSVSQYQFLILPFMCITAYYNLVLLHQQHWYFNALVLIFTLIGASLGAEAMLRSENVVYLQQTYQRIATSILCALFVIVIVLMWQRGVYPNQKDWSILGRQIASTDLRYERLGATDNGIVGFFCRCTMVNLDGVMNNAAVAYYRVHGYKEESILQFAREQHVAYIWDVGYWDFMPLDPDQVQIVRRIQFAAGTLYQIR
>NC_011831.1|WP_012615868.1|684965_685739_-|inositol-phosphate-phosphatase
MEIDVALVRVWAQRAGELLLHSYFNRVIPERKLDTSVVTMADRAIEDWLREQILAHYPHHGVIGEERGPIGLEREYVWVIDPIDGTSSFVAGLPMWAVSIGVLWRGEPLIGVIYLPVLRDCYWAIAGEAAFWNDTPIHVAPPEPPSPNDWIAIPSTFHRAYTIHYPGKVRVLGSVAADCCYVARGKAQAAIIGRAKVWDVAAGWVIVQAAGGVVCPLEGTLPDWSTLLHTVRLPTPVVIGHAEQVQRVCAWVRRISV
>NC_011831.1|WP_012615867.1|683546_684890_-|aspartate-aminotransferase-family-protein
MTAPAVRHIRLVTEIPGPRSRELLARRDAAVVAGLGRATPIAIASGSGALVTDVDGNTLIDFVSGIGTLAVGHCPPEVVQAIQQQAEQLIHLSALVGTYEPYVALCERLNALAPISEPCKTLLANSGAEGVENAIKFARAATGRPAIIVFDGAYHGRTLLTLSLTSRTYFKKKFGPFAPEIYRAPFPYAYRMGVSEEEAVEQCWAAFERMQIAGVDPETVAAVLIEPVQGEGGFIPVPVEFMRRLRQFCDRNGSLLIVDEVQSGFGRTGTLFAIEQFGVEPDIIVAAKSIAAGMPLAATIGRARVMDKAHYGGVGGTYGGNPLACVAALATLEIVERERLVERAHIIGRRIRDRLEPLLADDSLDPLVGDVRGLGAMIGIELVKDRRKRTPAAAEEVLAILGRALERGVLAMRAGLYVNCIRLLVPLVITDDQLDEGLDVLIGAMRG
>NC_011831.1|WP_012615866.1|682886_683492_-|GNAT-family-N-acetyltransferase
MSIVIVQTRPEHIPQLVIHQKICFPHLAPEDHFDADNFAAHLRVFPEGQHVALDGDRVVGQSSTFRIRGEKVFVHHTFHEIVDYGNFGNHDAEGEWLYGADMSVHPDYRGRGISRMLYNARKELVRRLGMRGIVAGGMTPGYVAYRDRMTFEEYVDAVVAGRLTDPTLTPQLRNGFTVRGIIYNHIHDSENPHATLIIWEA
>NC_011831.1|WP_012615865.1|681919_682885_-|magnesium/cobalt-transporter-CorA
MHTLTVFQRHGFQAVTDLDQISDLLMQPRTLIWLDLEQPTASEIERLRAEFGFHPLALEDALQEHERPKIETYPGYYLIIFYSVGYNASERSLQFLPITLFVGANYLVSIRSGPVRHVQQTLARWQTNSHVPGYQVSSVLYALIDAIVDDYFVVLDQIGEQIDEVEEAIFQRGRQEVASEIFTLKKDLLLFRRIVAPERDILNVLLRQEVRIFQPRELAYVRDVYDHLVRLTESIDLYRDLLSSALDSYLSLQGNQLNQLVKVLTLWSIILMACSLVAGIYGMNFVFMPELEQPWGYPFALGLMLTIAVGLGIYFKRSNWW
>NC_011831.1|WP_041470334.1|680444_681926_-|hypothetical-protein
MVSEPVLLLDGMPPVGAVVLERSVVEWSCELPATATAQLVIDGVTLEPFLRPGEHIWRWRWSVPSIAGEYTVRFTATWPDRQFEWCDVVQVAPSLLDAQQYVSLLADLAAIAPALAHALHGGRFGAGSVGYGVSDPAAFAALLTGSATRRLLTTIERLARRPRRQRLQAGGWHELGALRERPDPARWRPAASAAPLPNTGWPDRVWVVTPQTDPLDRGLVVAASLLDRLINLGRWVVLRDVPHATRATLVMVLGRMRALRIRLDVPARLPPSPSAWTPQSADERVLTAYRRLLRRQLGVGWTPELLSIPVRDVARLYELWCTARVTLSLLRLGGSEVLTQTLLAADSTLQITTEHPLLALALPNNTTITLRYQPRYTPDSTPFRSLDDRVRVPDLAIEIAAPNRSPNLIILDAKYRSEAGELPAYVLDEGYSYLAGLGREYGERAVSVLALLFPGHNAPITYASGLTVLPLLPGASCDHLDSWLRHNVLDRIT
>NC_011831.1|WP_012615863.1|679559_680483_+|M48-family-metalloprotease
MAGIARYSLTLLIELVGVALRYIVIEQTGSRLLPVAASEILALIGGIGPPCYSLLAWFGPPGGHWIVRWKLQGRRPTITEQSILTNALRVLANRGISPPDSIYILDQPGLNAGVIGHTLYIHRELLDSPHLAAVLAHEMGHYHSGDGRLALALQRLTIPGGKTLVNSIMHGYDLIGCGLALVFGLMKALVYVLLRVECNFGVRLIRFGRQFVRAVLLTLVGGYGIVVTTYIWRDYLRQRELAADRFAAYHGFAYSLLIFLEQTRLLEMNLPWTDDTFHPAFDERIAALQSYLRHLSGNSVEYVMSKP
>NC_011831.1|WP_012615862.1|678381_679530_+|hypothetical-protein
MRWCLTIVAMVVLAGCSTPVPSAPSSPAPTSLSAVVQPTPGMRILPAPLYILDRGQIARIEADGATRRQLTRERIEFAGIPPISDMDLHPTAGLVYVVGDAQGDRLVRTSLDGDNPETVFFETDYQLSAVRWSPDAQFIYLHLQNNRTTRDRPDGLYRVPATGGTLELLRTDDPVDDPLNPSRSVRSYAPFLWEPSGDSLILASTATFYDDCELVFWRPQDGALQHPVLPDGMQSWCGEAMWRSDQTALMLIGPPEGPGVWQVDTRTLQATRLSAEGTLARAPFFNGTDLLFIAVDRVDDGFTFTLTRQLPDGMVTPLRPPFREVPLLVRWAPDGSGIVALVRTETGTSLRWYPIGEQPAVNLPQTESGTTWLMWGPIPPQG
>NC_011831.1|WP_012615859.1|675583_676054_-|response-regulator
MNVHTEPLVILLVEDNPDHTELIIRALSDHQIPNRIIHVSDGEAALDYLWRRAQFADPATNPQPHVILLDLQLPRLNGLEVLQAIKSSVEMRHIPVVVVSTSYAEHDVSAAYRNYANSYLVKPVDFQQFTRMLHDLGDYWLGWNWPLRERLSPPMP
>NC_011831.1|WP_012615858.1|673431_675531_-|EAL-domain-containing-protein
MNVHVLLVEDNADHLVLAQRSCDQSHIALTLASSLAEARRLLAEQTFDLIVSDLVLSDGRGDELLTHANDDLPLPVVLMTGYGDEQVAVAALKAGALDYIVKTPDSLRDLPRIIERALRERRLLVERRQAEQALRQSERLFRAMIERSSDAISIVDRAGRVRYASPSTRHLIGYAVDGMLAVPINGFAVIHPTDRERVRQLFNKLIQHSGSSVTADFRVRHAKGGWRWIEATASNWLDDPAVQGVIVNYRDITERKLMELRLQHGMLHDSLTGLPNRLLLNDRLLQAIKRSHRNLHYQFALLFLDLDHFKFINDSFGHPLGDRLLVAIASRLSSCLRTVDTCARLGGDEFVILLDDIASPTDAIRIVERILRQVSLPFEIDGRLFHTSVSIGIVFGANNYTDPSQMLRDADIAMYQAKMAGKGRYRIFEPAMREAAQIRLDLEHELRRAVANHEFCVYYQPIIHLPSGRLVGFEALVRWRHPTRGILLPAAFLHVAEEAGLNDSIGWQVLEQVCQQLVVWRRLNPRAAALSVSVNLSARQVMQPNLYDRLMQLLAQYQVPPTALKLELTESTFMEYSHDVAALLNRLREQGIQIAIDDFGVGYSSLSYLVQLPIDQIKIDRNFIVQLESKQHSQAIVNTIVNLAHNLNLEVVAEGVETQGQLDWIRAVGCQYGQGYLIGLPLTADEATQMVQTIELYGD
>NC_011831.1|WP_012615870.1|700946_701555_-|CRISPR-associated-protein-Cas4
MTMPDLETVEVSDIKQWRYCPRVVWYAYCLPAIRPKTDLMRQGAASHRAEEDREARRSLRTYGLKSGERFFNVYLRSERLGVRGILDLAIAVPNRSDPAAKAVVVDYKDSEQPSGPHFKLQVGAYALLIEEAWGLPVETGWIYHIPLRKAEKVPISPQLRRNVLDTIAAVQRAIKTEALPPPPTSRAMCVNCEFRRFCNDVV
>NC_011831.1|WP_012615871.1|701541_701799_-|CRISPR-associated-endonuclease-Cas2
MQCLVIYDIPDDRARQRVADACLDYGLQRIQYSAFAGNLSRAHQRALFNEMTRRVKGRTANIQLFVFDAKTWGERRILEQQYDDA
>NC_011831.1|WP_012615872.1|701814_702828_-|CRISPR-associated-endonuclease-Cas1
MELIVDERGSFIGKHQGRLRVTKDNERLREVPIMHLRQVIICGSGVAISSDAVRACSEEGIPIHFISTNGTPQASLYSAGLTGTVLTRRAQLRAYDGPAGVTLARAFTLGKLGNQANLLRYAAKNRKETAPDIYEQLMTAAGEVVDYQIAVERLKGETVDEIRDELMGIEGRYAARYWKAIGALVPSELNWPGRETRGATDPFNQVLNYGYGVLYGQVEHAIVLAGLDPYAGLLHADRPGKPSLVLDLIEEFRQAVVDRPLLGQLTRGWQIGREEDGRLDQPTRERIVTKVLERLESTEPYEGKRQPLRHILQCQARHIATFVRGERENYTPFVMGW
>NC_011831.1|WP_012615873.1|703038_704016_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MSLTVHHLIFTATAATPVVLAAHSGPAVRGAISNALWNRFCANKSATTCAGCPLFQHCPVAALVAPMRSEDEKGSEQRPRPYVVRPPRDGGKRYQPGDTIRFGLALFGQAEIFFPFIVMAVRELERDGIGIRLAELGHRRGTIKLNTIEAYNPLSGERQMLYPLPGGNVNFPSLPIDATAVQDYAARLPTDQITLTFHTPARLVDQDRLVKQIALRPLIQRLMRRLDDLSRAYGSSPLAIDFRGLLAIAEQVTTTVDQTHWVDVVSVSSRQQRRTPVGGLIGSATFSGSLAPLRELVVWGSLIHVGRNAVKGDGWYTLADMPVLP
>NC_011831.1|WP_012615874.1|704018_706364_-|CRISPR-associated-helicase/endonuclease-Cas3
MNPSPWPHWIDNLLAKSQRYGGETLAAHTWAVLCRLADLYRLRPQIANSDSNRLWHCLYWAAFLHDFGKAARGFQQRLRGGPTWPHRHEVLSLAFVDAIAHGLSEDEQRWVVAAIVSHHRDEAEIAQTYPLGVRNDPLIELCREVDDETVRLLDEWLATCANPWREALGLAMVVEEITPQSVTVDAKRVRYWLQVYHDWVAANDPVARVPGILLRGLITTADHMASAHLHRVPPPITGSWSALAKRLLPQGEQIYEHQRQSGEMKGQSALLMAPTGSGKTEAALYWALGDGTAPPARIFYTLPYQASMNAMYDRLRQNFGDELVGLQHGRAAQALYARFREGEEWSAAARRVQWEKNLNILHARPLKVLSPYQLLKALFQLRGFEAMLTDYAQAAFVFDEIHAYEPERLALITGLMRYLREQFAARFFVMSATFPQLIRRRLTIALGNVPLIRASPEIFTRFRRHRLFLREGEITDPTTITEIVDKVRAGRQVLVCANTVARAQALRDQLAQAGLTDDQLLLIHSRFTHGDRTRLEQRIRSYCGSDVAERPPLVLVATQVVEVSLDIDLDTIYTDPAPLEALLQRFGRVNRRGAKGICPVYVFRQPNDGQGVYGRDRDPNRAGHIVRVTLAELEPHNGEIIDESAINDWLDRIYADPVLSQQWTEAYQRMAQQVELIINGLRPFQSDEQREDEFEQMFDGVEVVPQCFEQAYVDCLVQERLIEANDYLVSISKQRFAILRSQGKLRPAEEAGKRRVWVAQLPYDERNGLSFSDIVIDPDWS
>NC_011831.1|WP_012615875.1|706329_707079_-|type-I-B-CRISPR-associated-protein-Cas5
MRVLKIVLEGITTSFRYPHFMLGVQPTFPLPPPATIYGHICSALGEWFDPDGVMFAYHFTFAGEGQDLEHIHVLSVSSGKLPGGERKVLEGNVNPFKRNILLFPRLTLYLNRPDWIDYFRRPRYPVVLGRSQDLAVYTQIEVIELQQQAQVYFEHTLLPYTMAIQIPAGVVALMPSWIDYRNRRRPIFARYLMLTERVMSKQMLHFGSQKPRYWYDPTAPRIHDEPLGLVFHTFGGTADESFTVASLDR
>NC_011831.1|WP_012615876.1|707352_708444_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAFVTGLFLIDAPASALNNLGNIPGEREDNTVGVKMIATKAGNFPYVSAQAFRYWLRTTLEQRVPEWKASPIFREEKIAYTDANPIRYWDDDLFGYMRAPGKSDTAKKSREQISTLEEATPVKDTITRASPFRVSTLVSIAPVNPTNDFGVMSRHEGNPVPHEHQFYRTTLKGLFSLDLRACGTFSYLNRTGFRNLDDERMRIIKDYPGAEHLEAEKSYRLPKAERLARVKALFTGMAHLEGGAKQTLHYTDVSPALVMFAVTDGGNHIFHHTVGANRIGQPEIKTDALREALRVFADGIRSPVYVGWVKGYLDDARAAFEQFVAEHNANADANGLPRIELSHPREAFVSFVAACDAHQEWLD
>NC_011831.1|WP_012615877.1|708643_710146_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MVNSIGITYTGHPFIDVGFATLAAFANRRHLADLTTNDLAEMANYIEANYVRQPLRSFLTVAFTSNAWFAQSAFNPDRFDDPDKKIEAQQKRKYWADRHLRQWAQAAAALETCLFTGLPAAALELSGKLQPGRVGRAQMPLLQGDDSINFFTNGDPGLPMAPEAILALQAMPLGCAKVGGGLLAVHSDDEQLTIDFAKRFLERNLSDVAKAQAAGEEKLSGSPRSLKTLLIETLAEIIRRQMQEEVRRERRPTVTAYYFNNGQSPSLDIYHLPLQITGFLLAVHTPAYRAIWNELVQRSWQRLETPTKRRKVAEPTEPRFNYLYEDLFTLPAQAARFVRTYFLRIPNRSTATDDPRREYSTRREVDLVSWPLVELFVQEVMLMTDDRVAKLKELGDKLADYTRYQGGKRFFRQFFTVQRSDHFLTLLNKTNIDYTRYKRGTETLFDLDSFLTLFMEGEEVLRNDWRLMRDLVLIRMVEQLRDWIANNADAIPSEEEVVEA
>NC_011831.1|WP_012615878.1|710486_711440_-|WYL-domain-containing-transcriptional-regulator
MTRLERLIGIDAMIRSGRYPSVADFCQRFEVSERSIYNDLAYLRDRVNAPLDYSRQHGGYYYRDPTWVLPIIQVSEGELLSFLLSIELSRRYLGSVFAAPLRNLLSQLQHYQITIDPNDLLTHVTFQPGAVAPVDPALLNDVSVCIREQHPLEITYFTAVRRECNDRVIEPYHLYLARGDLYVIAYDHLRHTFRQFALCRIKRWQVQYQRRFQRDPTFDAAAYLRHAFVSEVGDRPVTVAIAFDREQAPYIRERQWHSTQQIEELPDGGLILRFENGALGEIKRWVLGYGAHARVLAPPELVQMVAVELQRAAAQYT
>NC_011831.1|WP_012615879.1|711510_711741_-|helix-turn-helix-domain-containing-protein
MFGSKQGKQARLRRYAELLACGPLTAAELAHRLGVPRSTVIRDLPLLEEQGILLAEDHAGRLSLVRCALSSNCGDV

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Crispr_ID: NC_011831_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_3

689334-700642

Unclear

Consensus_repeat	Method
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CRISPRCasFinder
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CRT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	PILER-CR

153 spacers

cas4,cas2,cas1,cas6,cas3,cas5,cas7,cas8b2,WYL

The CRISPR arrays of NC_011831_3

>merge|NC_011831|3|689334-700642|CRISPRCasFinder,CRT,PILER-CR
CTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACGTGTGAAACATATCCGTACTCGCGTACAATTGAATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACGGTTTAACCAACGAGCGAAGCGCGCATGTTCAAGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCCAACCGCGACGATGTACGCAGCCGACGCCGTCCAGAATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGATATCAACACTAACTCGCGTACTTATGCATCGTGCATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGATGACACGGAGTACCAGCCCTCGTCTCGTTGGTATCAGTAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAATGCGGATGAGTATCGCGGCGCCAGCTAAAATAAGCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCGGCAGGAATACTGCCGATACCAGTACCAATATCAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTAGACAGGCGCACGTTTATGACCAACGCGCGACACTAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCCATTGTTTCTTCTGTTTCTTCCGGTTCTTCCGTATGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCTTGACCCGCGCCGACATGAAATTGTCCTTGTGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCCGAGCGACTATCACTTGCGCAGCAACAGCTTGAGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCTTCCCCAATCTCCATATGTACTACCTCCCTCCCGCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTTTTTCCTGCGCCCCCTGAGATGTTTGGAATTTTCTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTAGCGGTAGGTATTATGTCCGTCGTATTATCTCAATGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGCTGTCGTCATAAGCGTCTAACCGAAGCGTGTCATGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCAGCGACGCGGCGCGCCACATTTTCATCTTCTTTTGTAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTCTTAAAGAGTGTGTTATAATAAAGCTGCGTTGGTTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACAAGTGATAGTCCGACCTGCCACGCGCGAACAACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCAAAAATATCGGTTCGGTGTAGCGCGACAATCGAAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAACCAAGCCAACCCTAATGAAAGGGTTGGTATGACGAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACAGCACCTGTGCTGCCGTGTCCGGCTGTGATGCCGCTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGATGACGGCATCGCCGCGTAGTTGCACCACAAACCGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTTGACGTATACGACGGTATATGTACACCCATGCCGACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTACCGGGAAGCATTACGTTTGAACGTAATGTGACAGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTAAAGTATCATGACGTGTCGTGTTAATCTGTGAAACAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCACCGATGTTGTGTAGTGTTGCGCCAACCAAGATGTGAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGTCATATTTGACGTAAGACGTGTACGTAAACAGAAGAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTTCCCGTCGGACAACGGGTGCGTGTGACCATTCAAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCATACCAACAATTGCAAGCGCAACAATTAAACACACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCAACGAACTACAACGATTGCAGAACCAACAGTTTGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAAACATCTTTCGTTCCTTGTTAAGCGAACGGCTGACAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAAACATCTTTCGTTCCTTGTTAAGCGAACGGCTGACAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCATGACCGTTGTGGTAGACATCTCCCTCGACGCCGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTGCTGGCGAGGGCGCTTTGGCGCACGATTTCGGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAGATCGCCCGGCTGGTGAACGCGATCACGGGATACTGGAAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGTGGCGGGGATCACCATCCCGTACCGACCGAGCGCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTATACCTCATAGTAGCAAGCTGCGCCTGTATTACTGTTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCAATACAAGACCGACCGCTCCAATAACAAGCGGATGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGATAAAAATCTGTTCCACCGTTTTTTACCTTCGCGCAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGTATCCGGCCGTCGCGTTAGAGGGCGTGCCGGATACGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCCCTAATCTTACTCTCATCTTCGCCTCCTTCGTTTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCAATACAAGACCGACCGCTCCAATAACAAGCGGATGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGTTCTGTTTTGACCCTTCTTGTCACCGTACCGTGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCGGCGGTTCATACGTTTACCGGGGTAACAATTACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGAGTAATCGCCTTCTGCCCACCACACGTATGATCCGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTTAGATCGTCGGACATTCATGACGAACGCGCGGCACTAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAATATTATCTGCGCAGGGTACCCCACCTGTTATGGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAATATTATCTGCGCAGGGTACCCCACCTGTTATGGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTGCTGCTTGCACACGTACGCGCAGGGCATCGCTCCACCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCCGTTGGTCGGCAGACAATACCGGGGGTCCCGGACCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAGCGAAGACCTTCGATATTAGCCAACAGATACTTGCCAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCTGCCGCCGTCCACGGCCACTTCGCCGCTTGCTCTACCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCGACCCGACCACCGGGATCGCGCTCCCCACGGCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAAGGCTAATGGCTAACGGTATTGATAACGAACTCAGACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGAAACAAAGTGGTGCGCAGCGGCGCGAACCAAACTCTCAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGTGGAATGTGCTTGGTGAAACGAAGACGGATCGTCGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCCATCCGTCCCGTCGCCGCTGCCACCGATGACAATCACCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGATTCTTCCTCCGGTTCGTTGACGGGACGGGTTCCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCAAGCTGCCCTCCGGCAAACGGATCCATTTCAAGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAGCGCCCGCAGGAGTGTCAGCATGCGCGGGTCGGTGAGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTTGGAGATGCTTTTTACAATAGACTCGATTGTATCGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGGGACGGATGGCGACCCGGTGCTTGTCGTCGGTGGCAGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTACCCATACACAAACCAGCGATCTGCCGGCTGGTACTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGGCGCTCGCAAAGCGCGCGAGGCCTTGACAGCGGTTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACGTTGACTTTTTCGACATTTTTGTTATTCCTACGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGTATGCAAGCGCGAAGTCGTACACGCGCACGCATACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTTGAAGTTCGCTATGTATTGGATGAGGAAAGATGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCCAAGCCAATCGCTTATCAACCCAAGACGATTCGATCCAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTGGATGCGTACTACCGTATCCGGCGATATGTGCGCGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGGGTTGGCTTGGTTCTTATTCGCTGTTGCACGCAGGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTGCGCCGCGCTCGGCCAGTTCGAGGCCGAGCCGAAAACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCCCAATCGTGCCCGCAGGAACGATAGACAGCGCAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTGTTTATAGATGCTACGCCGCGCGAGCTGAAGACATTCTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCAGTCGTGTCCCCATTACGCGCTTTAACTCGTATTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTCCACCGAACGCACGTAGCGCGACAGCGGCAGAAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCTTGATCACCATAAAGGTACTGATACCAGCGCGACGAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTCCACCGAACGCACGTAGCGCGACAGCGGCAGAAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAGTCAGCAATTTGGCAGCGGGAGCCGACTCCTGATCGAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGACTCCGCGCTCCAGCTCTCCCCCGCGCACATCGACGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTTGGCCGATTTGAAGATCGAGGAGCTAACCGATCCTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGAGATGATCGGTTGGTGGCAGCAGCACGGCACGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTTTTCGGACCTCCGCAGCGCTCGTCTCCTCCTGGTCGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTACCGGGTGGTCATGCCCAACGGCATGACCTACGAGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACGGTACATGCGCGATTGAGGCAATATCCCATCTGGGAAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAAATGAAACATATAACAATGACAATGCCGTTGCGTTCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCAACGATCTGGCCAAGCTGCTGCAACAACGGGCCGGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGCGAGATCGAACCGCCAGCGTCGCGTTGGGTGGAAGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGATAATGAGCGATTTTGGTGTTGCATCGCTGTAGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCTCCGACACGCGATTGTTATCGATCCTAACCGTTGCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCGAGCGCTAATTGCTGCACGTCCGCAAGCGAGCGCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAAGTTATATTCCCCACGATCAATCACCCGGAAGTCGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCGTGACATTAGCCGCGTGATTGAGGAAATTCGGGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACCAAATATGCAGCTCTGCCGCCACCTCGCCGTCGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCATTTCAACGCCATTTGATGCGTTATACATCCTTCTCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCTCCGACACGCGATTGTTATCGATCCTAACCGTTGCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTGGTGATCGCATACGCAACCGCACCGTGCTGGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAATAAATAGTTCATAATCTGTCACTTGTACATAGTTATCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGAAGAGCGAGAAATGCTTCCCATGCCGCTTCGGTACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACTACGCTGACGCGCATGACTATTATTATCAGCTCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAAGTTATATTCCCCACGATCAATCACCCGGAAGTCGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTACAACGTAAACTGGTCGTCCGAAAGTGCGCCGATCAAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCAAGATGTTAAACCACAGCGTAACGCTGCGATACCAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCCGCGATGTGGAAATCAATCCCATGAGAACGGAGAAGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCTGTCGGTAGTCATCACTATCTTCCCCACCATACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGATCATGGATCGCGTTGATGTATACCATTATCAAGAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCAAAGAAGGATATTGAGCGTGTCCCCCTCACGAAAAGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAGTAAGGGTAGTTTAGAAAGAACCAAAGATGCTGTGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGTGTACAACTCAACCAAGACCTTTCCCGTAAACGCAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCATCTGGGAAGGGAAACGTCGGCAATAAAGCGAAAGAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGTGATCGTCGTTGATTGCGCCGCGTTGCGATATGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTAGCCGGCTATCGGGTCGCTTCGATAGTTGGGCGGTAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTCTTGCTTCCGGTTTTCACGAGTACCGGCAAGATGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGTCCTGTTTCTTGCCGTTCCCTTGCTGCTGATCACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACGACGCGACTGCTACGACGACGCTGCGGTAGTGCGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCAGATCGCGCGGCCATTGCACCGTCGCCCGGCATTGGCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGGATAATACGTCTTTTTGGTACCAACGATACGTGAAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTGATGTATACCATTATCAAGACGGTACATGGTACGAAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCAGATGCTAAAACAACTGGTGCAAAAGTAACACAACGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTTCTTAAAAATCGGAGGAGTTTACACTTTCGTGAAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGATACCGTGAAGTGCCTGTTGCCAACGTCGTATCAAAAGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCAATATTCACCAACCCATACGGCTCACCGTTGCCAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCGGCATTTGTAGCGGTAAGCGCTGTTGTCGCCGTGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGGGTTACGCGATCCGCTGCAATTCGACTTTTACCCGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTTACCCGCCGGCAGCTCTAGCCGCACCAGCCGACGCGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGTCTTCTATCTCCAGTCGCACGCGCGCGTTACCCGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAGTTAAATTCGCGCTCCACCTCAACTGCCCGCACGTAGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCATACAAGCCAGCCGGCAGCGGAACAAACGCATCCTTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCGATCGCGCTCGATGAGCAGCGTAAACTTCAGTCGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCCTTATCGGTGACGACATGGCCGGATTCCGGTTGTACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTGCGCAGCAGCCACGCTGCGAGCGCCGCGTCGGCGTCGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGATGCAGAGTATGCGTCCCTCGACGCGCTGGAGGTGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTTGGCGCTGATTCCGGTTGCGACACCTTGCGCGATGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCTTACGGCGGCGAGCGATCGTACCAGTCCCGAAGCGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGAGCCGGGGTGTGTGGCAACCTTCTTCATGGATGAGGAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCCTTGTTCAGCGTCGTTGCCGTGATGTAGTGCGAGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCTCGCGATCATCGCGGGGCAAGTCGTCGAGCGGTCGCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGTGCCCAACAAGAGTGATCACACTCTTGTTTATGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCGACGCGCCGCACCGTGCGCAACTTACCACCTCCGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACTTGCCCAACTCCGCCAGCGTTGCCTCGTCGTTCGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAGGAGGCAGGCGAGGTACTTGAAACCGTCACCCGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGCGGCGCGCCCCTACTGCCCCGCCATACGTCTCGTTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTCGGCATTATGCTGAGTGTTGCGCCGGCGGCGCTGATGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCGGGGCGCTTGCGCTCGCGTGGCGGTCAGGAGTGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCCCCGTGCAAGTCACGCACGTATTGGACAACCGGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGCGTAGTATCATGGAGTAGAAGAGTATGCAGATTAAGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGAAGGCCCCGGGACAGAAAACGGGGTCGCCGTAATGGTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGGCGCAACTGGCTTCGGTCGCTCCTGGCCATTGTCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGCAGTAGCGGAAGGCAAGATAGAACGCCAGCAGCGCACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGTTTGATACGATGTTGGCCGAAACGTTGCTGCGGGCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGACGTCGTGGAAGAAGCAGCACAAGCGGATCAGTTCGGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGAGTCGCGCGCGCTGCCGGAACCGTCGCCGCTGGACGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGTGCTTTATGTTTCGTGAAGTATTCGGTCGCATGTTGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAGGGCGCAATCTTCTTGATCCCCTTCACCCCCTAACCCGTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG

>NC_011831|3|3|689334-700642|CRISPRCasFinder
CTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGTGTGAAACATATCCGTACTCGCGTACAATTGA
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGGTTTAACCAACGAGCGAAGCGCGCATGTTCAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCAACCGCGACGATGTACGCAGCCGACGCCGTCCAGA
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATATCAACACTAACTCGCGTACTTATGCATCGTGC
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATGACACGGAGTACCAGCCCTCGTCTCGTTGGTATCAGTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATGCGGATGAGTATCGCGGCGCCAGCTAAAATAAGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGGCAGGAATACTGCCGATACCAGTACCAATATCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TAGACAGGCGCACGTTTATGACCAACGCGCGACACTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCCATTGTTTCTTCTGTTTCTTCCGGTTCTTCCGTAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTTGACCCGCGCCGACATGAAATTGTCCTTGTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGAGCGACTATCACTTGCGCAGCAACAGCTTGAGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTTCCCCAATCTCCATATGTACTACCTCCCTCCCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTTTTCCTGCGCCCCCTGAGATGTTTGGAATTTTCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TAGCGGTAGGTATTATGTCCGTCGTATTATCTCAAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGCTGTCGTCATAAGCGTCTAACCGAAGCGTGTCAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGCGACGCGGCGCGCCACATTTTCATCTTCTTTTGTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCTTAAAGAGTGTGTTATAATAAAGCTGCGTTGGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACAAGTGATAGTCCGACCTGCCACGCGCGAACAAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAAAAATATCGGTTCGGTGTAGCGCGACAATCGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AACCAAGCCAACCCTAATGAAAGGGTTGGTATGACGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACAGCACCTGTGCTGCCGTGTCCGGCTGTGATGCCGCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGATGACGGCATCGCCGCGTAGTTGCACCACAAACCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTTGACGTATACGACGGTATATGTACACCCATGCCGAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TACCGGGAAGCATTACGTTTGAACGTAATGTGACAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTAAAGTATCATGACGTGTCGTGTTAATCTGTGAAACA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCACCGATGTTGTGTAGTGTTGCGCCAACCAAGATGTGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTCATATTTGACGTAAGACGTGTACGTAAACAGAAGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTCCCGTCGGACAACGGGTGCGTGTGACCATTCAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCATACCAACAATTGCAAGCGCAACAATTAAACACAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCAACGAACTACAACGATTGCAGAACCAACAGTTTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAACATCTTTCGTTCCTTGTTAAGCGAACGGCTGACA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAACATCTTTCGTTCCTTGTTAAGCGAACGGCTGACA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CATGACCGTTGTGGTAGACATCTCCCTCGACGCCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGCTGGCGAGGGCGCTTTGGCGCACGATTTCGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGATCGCCCGGCTGGTGAACGCGATCACGGGATACTGGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGGCGGGGATCACCATCCCGTACCGACCGAGCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TATACCTCATAGTAGCAAGCTGCGCCTGTATTACTGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAATACAAGACCGACCGCTCCAATAACAAGCGGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATAAAAATCTGTTCCACCGTTTTTTACCTTCGCGCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTATCCGGCCGTCGCGTTAGAGGGCGTGCCGGATACG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCCTAATCTTACTCTCATCTTCGCCTCCTTCGTTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAATACAAGACCGACCGCTCCAATAACAAGCGGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTTCTGTTTTGACCCTTCTTGTCACCGTACCGTG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGGCGGTTCATACGTTTACCGGGGTAACAATTAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAGTAATCGCCTTCTGCCCACCACACGTATGATCCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTAGATCGTCGGACATTCATGACGAACGCGCGGCACTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATATTATCTGCGCAGGGTACCCCACCTGTTATGGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATATTATCTGCGCAGGGTACCCCACCTGTTATGGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGCTGCTTGCACACGTACGCGCAGGGCATCGCTCCACC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGTTGGTCGGCAGACAATACCGGGGGTCCCGGACCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGCGAAGACCTTCGATATTAGCCAACAGATACTTGCCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTGCCGCCGTCCACGGCCACTTCGCCGCTTGCTCTACC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGACCCGACCACCGGGATCGCGCTCCCCACGGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGGCTAATGGCTAACGGTATTGATAACGAACTCAGAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAAACAAAGTGGTGCGCAGCGGCGCGAACCAAACTCTCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGGAATGTGCTTGGTGAAACGAAGACGGATCGTCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCATCCGTCCCGTCGCCGCTGCCACCGATGACAATCACC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GATTCTTCCTCCGGTTCGTTGACGGGACGGGTTCCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCAAGCTGCCCTCCGGCAAACGGATCCATTTCAAGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGCGCCCGCAGGAGTGTCAGCATGCGCGGGTCGGTGAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTGGAGATGCTTTTTACAATAGACTCGATTGTATCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGGACGGATGGCGACCCGGTGCTTGTCGTCGGTGGCAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TACCCATACACAAACCAGCGATCTGCCGGCTGGTACT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGCGCTCGCAAAGCGCGCGAGGCCTTGACAGCGGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGTTGACTTTTTCGACATTTTTGTTATTCCTACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTATGCAAGCGCGAAGTCGTACACGCGCACGCATAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTTGAAGTTCGCTATGTATTGGATGAGGAAAGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCAAGCCAATCGCTTATCAACCCAAGACGATTCGATCCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGGATGCGTACTACCGTATCCGGCGATATGTGCGCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGGTTGGCTTGGTTCTTATTCGCTGTTGCACGCAGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGCGCCGCGCTCGGCCAGTTCGAGGCCGAGCCGAAAAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCCAATCGTGCCCGCAGGAACGATAGACAGCGCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGTTTATAGATGCTACGCCGCGCGAGCTGAAGACATTCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGTCGTGTCCCCATTACGCGCTTTAACTCGTATT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCCACCGAACGCACGTAGCGCGACAGCGGCAGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTTGATCACCATAAAGGTACTGATACCAGCGCGACGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCCACCGAACGCACGTAGCGCGACAGCGGCAGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGTCAGCAATTTGGCAGCGGGAGCCGACTCCTGATCGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GACTCCGCGCTCCAGCTCTCCCCCGCGCACATCGACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTGGCCGATTTGAAGATCGAGGAGCTAACCGATCCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGAGATGATCGGTTGGTGGCAGCAGCACGGCACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTTTCGGACCTCCGCAGCGCTCGTCTCCTCCTGGTCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTACCGGGTGGTCATGCCCAACGGCATGACCTACGAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGGTACATGCGCGATTGAGGCAATATCCCATCTGGGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAATGAAACATATAACAATGACAATGCCGTTGCGTTC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCAACGATCTGGCCAAGCTGCTGCAACAACGGGCCGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGCGAGATCGAACCGCCAGCGTCGCGTTGGGTGGAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GATAATGAGCGATTTTGGTGTTGCATCGCTGTAGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTCCGACACGCGATTGTTATCGATCCTAACCGTTGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGAGCGCTAATTGCTGCACGTCCGCAAGCGAGCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGTTATATTCCCCACGATCAATCACCCGGAAGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGTGACATTAGCCGCGTGATTGAGGAAATTCGGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACCAAATATGCAGCTCTGCCGCCACCTCGCCGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CATTTCAACGCCATTTGATGCGTTATACATCCTTCTC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTCCGACACGCGATTGTTATCGATCCTAACCGTTGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGGTGATCGCATACGCAACCGCACCGTGCTGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATAAATAGTTCATAATCTGTCACTTGTACATAGTTATC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGAAGAGCGAGAAATGCTTCCCATGCCGCTTCGGTAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACTACGCTGACGCGCATGACTATTATTATCAGCTC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGTTATATTCCCCACGATCAATCACCCGGAAGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TACAACGTAAACTGGTCGTCCGAAAGTGCGCCGATCAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAAGATGTTAAACCACAGCGTAACGCTGCGATACCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGCGATGTGGAAATCAATCCCATGAGAACGGAGAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCTGTCGGTAGTCATCACTATCTTCCCCACCATAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGATCATGGATCGCGTTGATGTATACCATTATCAAGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAAAGAAGGATATTGAGCGTGTCCCCCTCACGAAAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGTAAGGGTAGTTTAGAAAGAACCAAAGATGCTGTGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGTACAACTCAACCAAGACCTTTCCCGTAAACGCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCATCTGGGAAGGGAAACGTCGGCAATAAAGCGAAAGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGATCGTCGTTGATTGCGCCGCGTTGCGATATGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTAGCCGGCTATCGGGTCGCTTCGATAGTTGGGCGGTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCTTGCTTCCGGTTTTCACGAGTACCGGCAAGATGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTCCTGTTTCTTGCCGTTCCCTTGCTGCTGATCAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGACGCGACTGCTACGACGACGCTGCGGTAGTGCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGATCGCGCGGCCATTGCACCGTCGCCCGGCATTGGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGATAATACGTCTTTTTGGTACCAACGATACGTGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGATGTATACCATTATCAAGACGGTACATGGTACGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGATGCTAAAACAACTGGTGCAAAAGTAACACAACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTCTTAAAAATCGGAGGAGTTTACACTTTCGTGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATACCGTGAAGTGCCTGTTGCCAACGTCGTATCAAAAGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCAATATTCACCAACCCATACGGCTCACCGTTGCCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGGCATTTGTAGCGGTAAGCGCTGTTGTCGCCGTG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGGTTACGCGATCCGCTGCAATTCGACTTTTACCCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTACCCGCCGGCAGCTCTAGCCGCACCAGCCGACGCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTCTTCTATCTCCAGTCGCACGCGCGCGTTACCCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGTTAAATTCGCGCTCCACCTCAACTGCCCGCACGTAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CATACAAGCCAGCCGGCAGCGGAACAAACGCATCCTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGATCGCGCTCGATGAGCAGCGTAAACTTCAGTCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCTTATCGGTGACGACATGGCCGGATTCCGGTTGTAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGCGCAGCAGCCACGCTGCGAGCGCCGCGTCGGCGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATGCAGAGTATGCGTCCCTCGACGCGCTGGAGGTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTGGCGCTGATTCCGGTTGCGACACCTTGCGCGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCTTACGGCGGCGAGCGATCGTACCAGTCCCGAAGCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAGCCGGGGTGTGTGGCAACCTTCTTCATGGATGAGGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCCTTGTTCAGCGTCGTTGCCGTGATGTAGTGCGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCGCGATCATCGCGGGGCAAGTCGTCGAGCGGTCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTGCCCAACAAGAGTGATCACACTCTTGTTTATG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGACGCGCCGCACCGTGCGCAACTTACCACCTCCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACTTGCCCAACTCCGCCAGCGTTGCCTCGTCGTTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGGAGGCAGGCGAGGTACTTGAAACCGTCACCCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGCGGCGCGCCCCTACTGCCCCGCCATACGTCTCGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGGCATTATGCTGAGTGTTGCGCCGGCGGCGCTGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGGGGCGCTTGCGCTCGCGTGGCGGTCAGGAGTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCCCCGTGCAAGTCACGCACGTATTGGACAACCGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGTAGTATCATGGAGTAGAAGAGTATGCAGATTAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGGCCCCGGGACAGAAAACGGGGTCGCCGTAATGGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGCGCAACTGGCTTCGGTCGCTCCTGGCCATTGTCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGTAGCGGAAGGCAAGATAGAACGCCAGCAGCGCAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTTTGATACGATGTTGGCCGAAACGTTGCTGCGGGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGTCGTGGAAGAAGCAGCACAAGCGGATCAGTTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAGTCGCGCGCGCTGCCGGAACCGTCGCCGCTGGAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGCTTTATGTTTCGTGAAGTATTCGGTCGCATGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGCGCAATCTTCTTGATCCCCTTCACCCCCTAACCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG

>NC_011831|3|2|689334-700642|CRT
CTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGTGTGAAACATATCCGTACTCGCGTACAATTGA
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGGTTTAACCAACGAGCGAAGCGCGCATGTTCAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCAACCGCGACGATGTACGCAGCCGACGCCGTCCAGA
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATATCAACACTAACTCGCGTACTTATGCATCGTGC
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATGACACGGAGTACCAGCCCTCGTCTCGTTGGTATCAGTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATGCGGATGAGTATCGCGGCGCCAGCTAAAATAAGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGGCAGGAATACTGCCGATACCAGTACCAATATCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TAGACAGGCGCACGTTTATGACCAACGCGCGACACTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCCATTGTTTCTTCTGTTTCTTCCGGTTCTTCCGTAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTTGACCCGCGCCGACATGAAATTGTCCTTGTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGAGCGACTATCACTTGCGCAGCAACAGCTTGAGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTTCCCCAATCTCCATATGTACTACCTCCCTCCCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTTTTCCTGCGCCCCCTGAGATGTTTGGAATTTTCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TAGCGGTAGGTATTATGTCCGTCGTATTATCTCAAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGCTGTCGTCATAAGCGTCTAACCGAAGCGTGTCAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGCGACGCGGCGCGCCACATTTTCATCTTCTTTTGTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCTTAAAGAGTGTGTTATAATAAAGCTGCGTTGGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACAAGTGATAGTCCGACCTGCCACGCGCGAACAAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAAAAATATCGGTTCGGTGTAGCGCGACAATCGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AACCAAGCCAACCCTAATGAAAGGGTTGGTATGACGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACAGCACCTGTGCTGCCGTGTCCGGCTGTGATGCCGCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGATGACGGCATCGCCGCGTAGTTGCACCACAAACCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTTGACGTATACGACGGTATATGTACACCCATGCCGAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TACCGGGAAGCATTACGTTTGAACGTAATGTGACAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTAAAGTATCATGACGTGTCGTGTTAATCTGTGAAACA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCACCGATGTTGTGTAGTGTTGCGCCAACCAAGATGTGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTCATATTTGACGTAAGACGTGTACGTAAACAGAAGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTCCCGTCGGACAACGGGTGCGTGTGACCATTCAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCATACCAACAATTGCAAGCGCAACAATTAAACACAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCAACGAACTACAACGATTGCAGAACCAACAGTTTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAACATCTTTCGTTCCTTGTTAAGCGAACGGCTGACA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAACATCTTTCGTTCCTTGTTAAGCGAACGGCTGACA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CATGACCGTTGTGGTAGACATCTCCCTCGACGCCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGCTGGCGAGGGCGCTTTGGCGCACGATTTCGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGATCGCCCGGCTGGTGAACGCGATCACGGGATACTGGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGGCGGGGATCACCATCCCGTACCGACCGAGCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TATACCTCATAGTAGCAAGCTGCGCCTGTATTACTGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAATACAAGACCGACCGCTCCAATAACAAGCGGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATAAAAATCTGTTCCACCGTTTTTTACCTTCGCGCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTATCCGGCCGTCGCGTTAGAGGGCGTGCCGGATACG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCCTAATCTTACTCTCATCTTCGCCTCCTTCGTTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAATACAAGACCGACCGCTCCAATAACAAGCGGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTTCTGTTTTGACCCTTCTTGTCACCGTACCGTG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGGCGGTTCATACGTTTACCGGGGTAACAATTAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAGTAATCGCCTTCTGCCCACCACACGTATGATCCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTAGATCGTCGGACATTCATGACGAACGCGCGGCACTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATATTATCTGCGCAGGGTACCCCACCTGTTATGGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATATTATCTGCGCAGGGTACCCCACCTGTTATGGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGCTGCTTGCACACGTACGCGCAGGGCATCGCTCCACC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGTTGGTCGGCAGACAATACCGGGGGTCCCGGACCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGCGAAGACCTTCGATATTAGCCAACAGATACTTGCCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTGCCGCCGTCCACGGCCACTTCGCCGCTTGCTCTACC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGACCCGACCACCGGGATCGCGCTCCCCACGGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGGCTAATGGCTAACGGTATTGATAACGAACTCAGAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAAACAAAGTGGTGCGCAGCGGCGCGAACCAAACTCTCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGGAATGTGCTTGGTGAAACGAAGACGGATCGTCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCATCCGTCCCGTCGCCGCTGCCACCGATGACAATCACC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GATTCTTCCTCCGGTTCGTTGACGGGACGGGTTCCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCAAGCTGCCCTCCGGCAAACGGATCCATTTCAAGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGCGCCCGCAGGAGTGTCAGCATGCGCGGGTCGGTGAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTGGAGATGCTTTTTACAATAGACTCGATTGTATCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGGACGGATGGCGACCCGGTGCTTGTCGTCGGTGGCAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TACCCATACACAAACCAGCGATCTGCCGGCTGGTACT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGCGCTCGCAAAGCGCGCGAGGCCTTGACAGCGGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGTTGACTTTTTCGACATTTTTGTTATTCCTACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTATGCAAGCGCGAAGTCGTACACGCGCACGCATAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTTGAAGTTCGCTATGTATTGGATGAGGAAAGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCAAGCCAATCGCTTATCAACCCAAGACGATTCGATCCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGGATGCGTACTACCGTATCCGGCGATATGTGCGCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGGTTGGCTTGGTTCTTATTCGCTGTTGCACGCAGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGCGCCGCGCTCGGCCAGTTCGAGGCCGAGCCGAAAAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCCAATCGTGCCCGCAGGAACGATAGACAGCGCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGTTTATAGATGCTACGCCGCGCGAGCTGAAGACATTCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGTCGTGTCCCCATTACGCGCTTTAACTCGTATT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCCACCGAACGCACGTAGCGCGACAGCGGCAGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTTGATCACCATAAAGGTACTGATACCAGCGCGACGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCCACCGAACGCACGTAGCGCGACAGCGGCAGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGTCAGCAATTTGGCAGCGGGAGCCGACTCCTGATCGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GACTCCGCGCTCCAGCTCTCCCCCGCGCACATCGACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTGGCCGATTTGAAGATCGAGGAGCTAACCGATCCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGAGATGATCGGTTGGTGGCAGCAGCACGGCACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTTTCGGACCTCCGCAGCGCTCGTCTCCTCCTGGTCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTACCGGGTGGTCATGCCCAACGGCATGACCTACGAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGGTACATGCGCGATTGAGGCAATATCCCATCTGGGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAATGAAACATATAACAATGACAATGCCGTTGCGTTC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCAACGATCTGGCCAAGCTGCTGCAACAACGGGCCGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGCGAGATCGAACCGCCAGCGTCGCGTTGGGTGGAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GATAATGAGCGATTTTGGTGTTGCATCGCTGTAGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTCCGACACGCGATTGTTATCGATCCTAACCGTTGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGAGCGCTAATTGCTGCACGTCCGCAAGCGAGCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGTTATATTCCCCACGATCAATCACCCGGAAGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGTGACATTAGCCGCGTGATTGAGGAAATTCGGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACCAAATATGCAGCTCTGCCGCCACCTCGCCGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CATTTCAACGCCATTTGATGCGTTATACATCCTTCTC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTCCGACACGCGATTGTTATCGATCCTAACCGTTGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGGTGATCGCATACGCAACCGCACCGTGCTGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATAAATAGTTCATAATCTGTCACTTGTACATAGTTATC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGAAGAGCGAGAAATGCTTCCCATGCCGCTTCGGTAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACTACGCTGACGCGCATGACTATTATTATCAGCTC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGTTATATTCCCCACGATCAATCACCCGGAAGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TACAACGTAAACTGGTCGTCCGAAAGTGCGCCGATCAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAAGATGTTAAACCACAGCGTAACGCTGCGATACCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGCGATGTGGAAATCAATCCCATGAGAACGGAGAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCTGTCGGTAGTCATCACTATCTTCCCCACCATAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGATCATGGATCGCGTTGATGTATACCATTATCAAGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAAAGAAGGATATTGAGCGTGTCCCCCTCACGAAAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGTAAGGGTAGTTTAGAAAGAACCAAAGATGCTGTGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGTACAACTCAACCAAGACCTTTCCCGTAAACGCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCATCTGGGAAGGGAAACGTCGGCAATAAAGCGAAAGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGATCGTCGTTGATTGCGCCGCGTTGCGATATGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTAGCCGGCTATCGGGTCGCTTCGATAGTTGGGCGGTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCTTGCTTCCGGTTTTCACGAGTACCGGCAAGATGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTCCTGTTTCTTGCCGTTCCCTTGCTGCTGATCAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGACGCGACTGCTACGACGACGCTGCGGTAGTGCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGATCGCGCGGCCATTGCACCGTCGCCCGGCATTGGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGATAATACGTCTTTTTGGTACCAACGATACGTGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGATGTATACCATTATCAAGACGGTACATGGTACGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGATGCTAAAACAACTGGTGCAAAAGTAACACAACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTCTTAAAAATCGGAGGAGTTTACACTTTCGTGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATACCGTGAAGTGCCTGTTGCCAACGTCGTATCAAAAGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCAATATTCACCAACCCATACGGCTCACCGTTGCCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGGCATTTGTAGCGGTAAGCGCTGTTGTCGCCGTG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGGTTACGCGATCCGCTGCAATTCGACTTTTACCCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTACCCGCCGGCAGCTCTAGCCGCACCAGCCGACGCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTCTTCTATCTCCAGTCGCACGCGCGCGTTACCCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGTTAAATTCGCGCTCCACCTCAACTGCCCGCACGTAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CATACAAGCCAGCCGGCAGCGGAACAAACGCATCCTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGATCGCGCTCGATGAGCAGCGTAAACTTCAGTCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCTTATCGGTGACGACATGGCCGGATTCCGGTTGTAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGCGCAGCAGCCACGCTGCGAGCGCCGCGTCGGCGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATGCAGAGTATGCGTCCCTCGACGCGCTGGAGGTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTGGCGCTGATTCCGGTTGCGACACCTTGCGCGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCTTACGGCGGCGAGCGATCGTACCAGTCCCGAAGCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAGCCGGGGTGTGTGGCAACCTTCTTCATGGATGAGGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCCTTGTTCAGCGTCGTTGCCGTGATGTAGTGCGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCGCGATCATCGCGGGGCAAGTCGTCGAGCGGTCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTGCCCAACAAGAGTGATCACACTCTTGTTTATG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGACGCGCCGCACCGTGCGCAACTTACCACCTCCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACTTGCCCAACTCCGCCAGCGTTGCCTCGTCGTTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGGAGGCAGGCGAGGTACTTGAAACCGTCACCCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGCGGCGCGCCCCTACTGCCCCGCCATACGTCTCGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGGCATTATGCTGAGTGTTGCGCCGGCGGCGCTGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGGGGCGCTTGCGCTCGCGTGGCGGTCAGGAGTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCCCCGTGCAAGTCACGCACGTATTGGACAACCGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGTAGTATCATGGAGTAGAAGAGTATGCAGATTAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGGCCCCGGGACAGAAAACGGGGTCGCCGTAATGGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGCGCAACTGGCTTCGGTCGCTCCTGGCCATTGTCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGTAGCGGAAGGCAAGATAGAACGCCAGCAGCGCAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTTTGATACGATGTTGGCCGAAACGTTGCTGCGGGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGTCGTGGAAGAAGCAGCACAAGCGGATCAGTTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAGTCGCGCGCGCTGCCGGAACCGTCGCCGCTGGAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGCTTTATGTTTCGTGAAGTATTCGGTCGCATGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGCGCAATCTTCTTGATCCCCTTCACCCCCTAACCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG

>NC_011831|3|2|689479-700642|PILER-CR
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCAACCGCGACGATGTACGCAGCCGACGCCGTCCAGA
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATATCAACACTAACTCGCGTACTTATGCATCGTGC
ATTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATGACACGGAGTACCAGCCCTCGTCTCGTTGGTATCAGTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATGCGGATGAGTATCGCGGCGCCAGCTAAAATAAGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGGCAGGAATACTGCCGATACCAGTACCAATATCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TAGACAGGCGCACGTTTATGACCAACGCGCGACACTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCCATTGTTTCTTCTGTTTCTTCCGGTTCTTCCGTAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTTGACCCGCGCCGACATGAAATTGTCCTTGTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGAGCGACTATCACTTGCGCAGCAACAGCTTGAGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTTCCCCAATCTCCATATGTACTACCTCCCTCCCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTTTTCCTGCGCCCCCTGAGATGTTTGGAATTTTCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TAGCGGTAGGTATTATGTCCGTCGTATTATCTCAAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGCTGTCGTCATAAGCGTCTAACCGAAGCGTGTCAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGCGACGCGGCGCGCCACATTTTCATCTTCTTTTGTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCTTAAAGAGTGTGTTATAATAAAGCTGCGTTGGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACAAGTGATAGTCCGACCTGCCACGCGCGAACAAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAAAAATATCGGTTCGGTGTAGCGCGACAATCGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AACCAAGCCAACCCTAATGAAAGGGTTGGTATGACGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACAGCACCTGTGCTGCCGTGTCCGGCTGTGATGCCGCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGATGACGGCATCGCCGCGTAGTTGCACCACAAACCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTTGACGTATACGACGGTATATGTACACCCATGCCGAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TACCGGGAAGCATTACGTTTGAACGTAATGTGACAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTAAAGTATCATGACGTGTCGTGTTAATCTGTGAAACA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCACCGATGTTGTGTAGTGTTGCGCCAACCAAGATGTGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTCATATTTGACGTAAGACGTGTACGTAAACAGAAGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTCCCGTCGGACAACGGGTGCGTGTGACCATTCAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCATACCAACAATTGCAAGCGCAACAATTAAACACAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCAACGAACTACAACGATTGCAGAACCAACAGTTTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAACATCTTTCGTTCCTTGTTAAGCGAACGGCTGACA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAACATCTTTCGTTCCTTGTTAAGCGAACGGCTGACA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CATGACCGTTGTGGTAGACATCTCCCTCGACGCCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGCTGGCGAGGGCGCTTTGGCGCACGATTTCGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGATCGCCCGGCTGGTGAACGCGATCACGGGATACTGGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGGCGGGGATCACCATCCCGTACCGACCGAGCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TATACCTCATAGTAGCAAGCTGCGCCTGTATTACTGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAATACAAGACCGACCGCTCCAATAACAAGCGGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATAAAAATCTGTTCCACCGTTTTTTACCTTCGCGCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTATCCGGCCGTCGCGTTAGAGGGCGTGCCGGATACG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCCTAATCTTACTCTCATCTTCGCCTCCTTCGTTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAATACAAGACCGACCGCTCCAATAACAAGCGGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTTCTGTTTTGACCCTTCTTGTCACCGTACCGTG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGGCGGTTCATACGTTTACCGGGGTAACAATTAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAGTAATCGCCTTCTGCCCACCACACGTATGATCCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTAGATCGTCGGACATTCATGACGAACGCGCGGCACTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATATTATCTGCGCAGGGTACCCCACCTGTTATGGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATATTATCTGCGCAGGGTACCCCACCTGTTATGGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGCTGCTTGCACACGTACGCGCAGGGCATCGCTCCACC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGTTGGTCGGCAGACAATACCGGGGGTCCCGGACCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGCGAAGACCTTCGATATTAGCCAACAGATACTTGCCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTGCCGCCGTCCACGGCCACTTCGCCGCTTGCTCTACC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGACCCGACCACCGGGATCGCGCTCCCCACGGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGGCTAATGGCTAACGGTATTGATAACGAACTCAGAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAAACAAAGTGGTGCGCAGCGGCGCGAACCAAACTCTCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGGAATGTGCTTGGTGAAACGAAGACGGATCGTCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCATCCGTCCCGTCGCCGCTGCCACCGATGACAATCACC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GATTCTTCCTCCGGTTCGTTGACGGGACGGGTTCCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCAAGCTGCCCTCCGGCAAACGGATCCATTTCAAGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGCGCCCGCAGGAGTGTCAGCATGCGCGGGTCGGTGAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTGGAGATGCTTTTTACAATAGACTCGATTGTATCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGGACGGATGGCGACCCGGTGCTTGTCGTCGGTGGCAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TACCCATACACAAACCAGCGATCTGCCGGCTGGTACT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGCGCTCGCAAAGCGCGCGAGGCCTTGACAGCGGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGTTGACTTTTTCGACATTTTTGTTATTCCTACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTATGCAAGCGCGAAGTCGTACACGCGCACGCATAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTTGAAGTTCGCTATGTATTGGATGAGGAAAGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCAAGCCAATCGCTTATCAACCCAAGACGATTCGATCCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGGATGCGTACTACCGTATCCGGCGATATGTGCGCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGGTTGGCTTGGTTCTTATTCGCTGTTGCACGCAGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGCGCCGCGCTCGGCCAGTTCGAGGCCGAGCCGAAAAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCCAATCGTGCCCGCAGGAACGATAGACAGCGCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTGTTTATAGATGCTACGCCGCGCGAGCTGAAGACATTCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGTCGTGTCCCCATTACGCGCTTTAACTCGTATT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCCACCGAACGCACGTAGCGCGACAGCGGCAGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTTGATCACCATAAAGGTACTGATACCAGCGCGACGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCCACCGAACGCACGTAGCGCGACAGCGGCAGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGTCAGCAATTTGGCAGCGGGAGCCGACTCCTGATCGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GACTCCGCGCTCCAGCTCTCCCCCGCGCACATCGACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTGGCCGATTTGAAGATCGAGGAGCTAACCGATCCT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGAGATGATCGGTTGGTGGCAGCAGCACGGCACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTTTCGGACCTCCGCAGCGCTCGTCTCCTCCTGGTCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTACCGGGTGGTCATGCCCAACGGCATGACCTACGAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGGTACATGCGCGATTGAGGCAATATCCCATCTGGGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAATGAAACATATAACAATGACAATGCCGTTGCGTTC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCAACGATCTGGCCAAGCTGCTGCAACAACGGGCCGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGCGAGATCGAACCGCCAGCGTCGCGTTGGGTGGAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GATAATGAGCGATTTTGGTGTTGCATCGCTGTAGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTCCGACACGCGATTGTTATCGATCCTAACCGTTGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGAGCGCTAATTGCTGCACGTCCGCAAGCGAGCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGTTATATTCCCCACGATCAATCACCCGGAAGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGTGACATTAGCCGCGTGATTGAGGAAATTCGGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACCAAATATGCAGCTCTGCCGCCACCTCGCCGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CATTTCAACGCCATTTGATGCGTTATACATCCTTCTC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCTCCGACACGCGATTGTTATCGATCCTAACCGTTGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGGTGATCGCATACGCAACCGCACCGTGCTGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AATAAATAGTTCATAATCTGTCACTTGTACATAGTTATC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGAAGAGCGAGAAATGCTTCCCATGCCGCTTCGGTAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACTACGCTGACGCGCATGACTATTATTATCAGCTC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGTTATATTCCCCACGATCAATCACCCGGAAGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TACAACGTAAACTGGTCGTCCGAAAGTGCGCCGATCAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAAGATGTTAAACCACAGCGTAACGCTGCGATACCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCGCGATGTGGAAATCAATCCCATGAGAACGGAGAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCTGTCGGTAGTCATCACTATCTTCCCCACCATAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGATCATGGATCGCGTTGATGTATACCATTATCAAGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAAAGAAGGATATTGAGCGTGTCCCCCTCACGAAAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGTAAGGGTAGTTTAGAAAGAACCAAAGATGCTGTGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGTACAACTCAACCAAGACCTTTCCCGTAAACGCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCATCTGGGAAGGGAAACGTCGGCAATAAAGCGAAAGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTGATCGTCGTTGATTGCGCCGCGTTGCGATATGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTAGCCGGCTATCGGGTCGCTTCGATAGTTGGGCGGTA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCTTGCTTCCGGTTTTCACGAGTACCGGCAAGATGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTCCTGTTTCTTGCCGTTCCCTTGCTGCTGATCAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGACGCGACTGCTACGACGACGCTGCGGTAGTGCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGATCGCGCGGCCATTGCACCGTCGCCCGGCATTGGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGATAATACGTCTTTTTGGTACCAACGATACGTGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGATGTATACCATTATCAAGACGGTACATGGTACGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGATGCTAAAACAACTGGTGCAAAAGTAACACAACGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTCTTAAAAATCGGAGGAGTTTACACTTTCGTGAA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATACCGTGAAGTGCCTGTTGCCAACGTCGTATCAAAAGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCAATATTCACCAACCCATACGGCTCACCGTTGCCA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGGCATTTGTAGCGGTAAGCGCTGTTGTCGCCGTG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGGTTACGCGATCCGCTGCAATTCGACTTTTACCCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTACCCGCCGGCAGCTCTAGCCGCACCAGCCGACGCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTCTTCTATCTCCAGTCGCACGCGCGCGTTACCCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGTTAAATTCGCGCTCCACCTCAACTGCCCGCACGTAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CATACAAGCCAGCCGGCAGCGGAACAAACGCATCCTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGATCGCGCTCGATGAGCAGCGTAAACTTCAGTCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CCTTATCGGTGACGACATGGCCGGATTCCGGTTGTAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGCGCAGCAGCCACGCTGCGAGCGCCGCGTCGGCGTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ATGCAGAGTATGCGTCCCTCGACGCGCTGGAGGTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TTGGCGCTGATTCCGGTTGCGACACCTTGCGCGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCTTACGGCGGCGAGCGATCGTACCAGTCCCGAAGCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAGCCGGGGTGTGTGGCAACCTTCTTCATGGATGAGGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCCTTGTTCAGCGTCGTTGCCGTGATGTAGTGCGA
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CTCGCGATCATCGCGGGGCAAGTCGTCGAGCGGTCGCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGTGCCCAACAAGAGTGATCACACTCTTGTTTATG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGACGCGCCGCACCGTGCGCAACTTACCACCTCCGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACTTGCCCAACTCCGCCAGCGTTGCCTCGTCGTTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AGGAGGCAGGCGAGGTACTTGAAACCGTCACCCGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGCGGCGCGCCCCTACTGCCCCGCCATACGTCTCGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TCGGCATTATGCTGAGTGTTGCGCCGGCGGCGCTGAT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CGGGGCGCTTGCGCTCGCGTGGCGGTCAGGAGTGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCCCCGTGCAAGTCACGCACGTATTGGACAACCGG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GCGTAGTATCATGGAGTAGAAGAGTATGCAGATTAAG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	AAGGCCCCGGGACAGAAAACGGGGTCGCCGTAATGGT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGCGCAACTGGCTTCGGTCGCTCCTGGCCATTGTCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	CAGTAGCGGAAGGCAAGATAGAACGCCAGCAGCGCAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GTTTGATACGATGTTGGCCGAAACGTTGCTGCGGGC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	ACGTCGTGGAAGAAGCAGCACAAGCGGATCAGTTCG
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GAGTCGCGCGCGCTGCCGGAACCGTCGCCGCTGGAC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	TGCTTTATGTTTCGTGAAGTATTCGGTCGCATGTT
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG	GGCGCAATCTTCTTGATCCCCTTCACCCCCTAACCC
GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012615866.1\|682886_683492_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|173926
NC_011831.1\|WP_012615867.1\|683546_684890_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223238
NC_011831.1\|WP_012615863.1\|679559_680483_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320696
NC_011831.1\|WP_012615870.1\|700946_701555_-\|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|273040
NC_011831.1\|WP_012615878.1\|710486_711440_-\|WYL-domain-containing-transcriptional-regulator	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NC_011831.1\|WP_012615879.1\|711510_711741_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|285479
NC_011831.1\|WP_012615876.1\|707352_708444_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NC_011831.1\|WP_012615872.1\|701814_702828_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
NC_011831.1\|WP_012615875.1\|706329_707079_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	COG1688_cas5_CAS-I	gnl\|CDD\|273860
NC_011831.1\|WP_012615865.1\|681919_682885_-\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213356
NC_011831.1\|WP_012615871.1\|701541_701799_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NC_011831.1\|WP_041470334.1\|680444_681926_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367929
NC_011831.1\|WP_012615869.1\|686398_687946_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012615868.1\|684965_685739_-\|inositol-phosphate-phosphatase	unknown	unknown	gnl\|CDD\|238821
NC_011831.1\|WP_012615874.1\|704018_706364_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NC_011831.1\|WP_012615873.1\|703038_704016_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NC_011831.1\|WP_012615877.1\|708643_710146_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cls000029_cas8b2_CAS-I-B	gnl\|CDD\|187796
NC_011831.1\|WP_012615862.1\|678381_679530_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012615859.1\|675583_676054_-\|response-regulator	unknown	unknown	gnl\|CDD\|381108
NC_011831.1\|WP_012615858.1\|673431_675531_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012615866.1\|682886_683492_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|173926	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.	2.4722e-06
NC_011831.1\|WP_012615867.1\|683546_684890_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|223238	COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism].	0
NC_011831.1\|WP_012615863.1\|679559_680483_+\|M48-family-metalloprotease	gnl\|CDD\|320696	cd07337, M48B_HtpX_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase. This HtpX family of peptidase M48 subfamily B includes uncharacterized HtpX homologs and consists of proteins smaller than Ste24p, with homology restricted to the C-terminal half of Ste24p. HtpX expression is controlled by the Cpx stress response system, which senses abnormal membrane proteins. HtpX participates in the proteolytic quality control of these misfolded proteins by undergoing self-degradation and collaborating with FtsH, a membrane-bound and ATP-dependent protease, to eliminate them. HtpX, a zinc metalloprotease with an active site motif HEXXH, has an FtsH-like topology, and is capable of introducing endoproteolytic cleavages into SecY (also an FtsH substrate). However, HtpX does not have an ATPase activity and will only act against cytoplasmic regions of a target membrane protein. Thus, HtpX and FtsH have overlapping and/or complementary functions, which are especially important at high temperature; in E. coli and Xylella fastidiosa, HtpX is heat-inducible, while in Streptococcus gordonii it is not.	1.57531e-10
NC_011831.1\|WP_012615870.1\|700946_701555_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.07125e-29
NC_011831.1\|WP_012615878.1\|710486_711440_-\|WYL-domain-containing-transcriptional-regulator	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	1.44878e-40
NC_011831.1\|WP_012615879.1\|711510_711741_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|285479	pfam08279, HTH_11, HTH domain. This family includes helix-turn-helix domains in a wide variety of proteins.	4.90073e-06
NC_011831.1\|WP_012615859.1\|675583_676054_-\|response-regulator	gnl\|CDD\|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	7.62168e-64
NC_011831.1\|WP_012615875.1\|706329_707079_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	3.76522e-30
NC_011831.1\|WP_012615865.1\|681919_682885_-\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213356	cd12822, TmCorA-like, Thermotoga maritima CorA-like family. This family belongs to the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the Thermotoga maritima CorA_like family are found in all three kingdoms of life. It is a functionally diverse family, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes three Saccharomyces cerevisiae members: two plasma membrane proteins, the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	6.39053e-125
NC_011831.1\|WP_012615871.1\|701541_701799_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.40989e-16
NC_011831.1\|WP_041470334.1\|680444_681926_-\|hypothetical-protein	gnl\|CDD\|367929	pfam04411, PDDEXK_7, PD-(D/E)XK nuclease superfamily. This domain has been identified as a member of the PD-(D/E)XK nuclease superfamily through transitive meta profile searches. The domain has two additional beta-strands inserted to the core fold after the first core alpha-helix. It has been speculated that it could function as s methylation-dependent restriction. The domain has two additional beta-strands inserted into the core fold after the first core alpha-helix. The PD-(D/E)XK signature is clearly conserved corresponding to an invariant PD (motif II) and DAK (motif III) motifs. There is also a conserved glutamic acid in motif I that is most likely to be involved in metal ion binding. The second core alpha-helix contains an invariant MHXYRD motif. It has been speculated that it could function as s methylation-dependent restriction enzyme.	2.00969e-22
NC_011831.1\|WP_012615876.1\|707352_708444_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	3.05997e-53
NC_011831.1\|WP_012615868.1\|684965_685739_-\|inositol-phosphate-phosphatase	gnl\|CDD\|238821	cd01643, Bacterial_IMPase_like_2, Bacterial family of Mg++ dependent phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate inositol monophosphate or similar substrates.	2.58217e-85
NC_011831.1\|WP_012615874.1\|704018_706364_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	3.03683e-68
NC_011831.1\|WP_012615877.1\|708643_710146_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.89428e-11
NC_011831.1\|WP_012615873.1\|703038_704016_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	0.00195716
NC_011831.1\|WP_012615872.1\|701814_702828_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.66107e-103
NC_011831.1\|WP_012615858.1\|673431_675531_-\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	1.5494e-107

>NC_011831.1|WP_012615869.1|686398_687946_-|hypothetical-protein
MNTSKLRGPLDTQLIIVGILVGLAIRLWIAWQPTDELSWRANADDAYYYFKLAQHLGSGVGATFDGVNLTNGFHPLYALLLVPIFQYAGSDIDLGVHLALTLVALVSSVTAWPIYLAGKYVHSPLAGTIGALTHLLNPWVVILTMTGVESAVYVCCFAWTVMVYVRWRSHKQSLRGIVLIGLPAGLTVMARSEGMFLLAGIILDRLVVDRHVPGRAVAFAVLSGLFTTIVCLPWVCWSVFQFGSPLQISASAIMLHNYAAMPADAVAAFEWYVGRVFWFLPRYGYKILLFNLPLVLLFGFVIGRSWLTRQRSLKIAWSSVSQYQFLILPFMCITAYYNLVLLHQQHWYFNALVLIFTLIGASLGAEAMLRSENVVYLQQTYQRIATSILCALFVIVIVLMWQRGVYPNQKDWSILGRQIASTDLRYERLGATDNGIVGFFCRCTMVNLDGVMNNAAVAYYRVHGYKEESILQFAREQHVAYIWDVGYWDFMPLDPDQVQIVRRIQFAAGTLYQIR
>NC_011831.1|WP_012615868.1|684965_685739_-|inositol-phosphate-phosphatase
MEIDVALVRVWAQRAGELLLHSYFNRVIPERKLDTSVVTMADRAIEDWLREQILAHYPHHGVIGEERGPIGLEREYVWVIDPIDGTSSFVAGLPMWAVSIGVLWRGEPLIGVIYLPVLRDCYWAIAGEAAFWNDTPIHVAPPEPPSPNDWIAIPSTFHRAYTIHYPGKVRVLGSVAADCCYVARGKAQAAIIGRAKVWDVAAGWVIVQAAGGVVCPLEGTLPDWSTLLHTVRLPTPVVIGHAEQVQRVCAWVRRISV
>NC_011831.1|WP_012615867.1|683546_684890_-|aspartate-aminotransferase-family-protein
MTAPAVRHIRLVTEIPGPRSRELLARRDAAVVAGLGRATPIAIASGSGALVTDVDGNTLIDFVSGIGTLAVGHCPPEVVQAIQQQAEQLIHLSALVGTYEPYVALCERLNALAPISEPCKTLLANSGAEGVENAIKFARAATGRPAIIVFDGAYHGRTLLTLSLTSRTYFKKKFGPFAPEIYRAPFPYAYRMGVSEEEAVEQCWAAFERMQIAGVDPETVAAVLIEPVQGEGGFIPVPVEFMRRLRQFCDRNGSLLIVDEVQSGFGRTGTLFAIEQFGVEPDIIVAAKSIAAGMPLAATIGRARVMDKAHYGGVGGTYGGNPLACVAALATLEIVERERLVERAHIIGRRIRDRLEPLLADDSLDPLVGDVRGLGAMIGIELVKDRRKRTPAAAEEVLAILGRALERGVLAMRAGLYVNCIRLLVPLVITDDQLDEGLDVLIGAMRG
>NC_011831.1|WP_012615866.1|682886_683492_-|GNAT-family-N-acetyltransferase
MSIVIVQTRPEHIPQLVIHQKICFPHLAPEDHFDADNFAAHLRVFPEGQHVALDGDRVVGQSSTFRIRGEKVFVHHTFHEIVDYGNFGNHDAEGEWLYGADMSVHPDYRGRGISRMLYNARKELVRRLGMRGIVAGGMTPGYVAYRDRMTFEEYVDAVVAGRLTDPTLTPQLRNGFTVRGIIYNHIHDSENPHATLIIWEA
>NC_011831.1|WP_012615865.1|681919_682885_-|magnesium/cobalt-transporter-CorA
MHTLTVFQRHGFQAVTDLDQISDLLMQPRTLIWLDLEQPTASEIERLRAEFGFHPLALEDALQEHERPKIETYPGYYLIIFYSVGYNASERSLQFLPITLFVGANYLVSIRSGPVRHVQQTLARWQTNSHVPGYQVSSVLYALIDAIVDDYFVVLDQIGEQIDEVEEAIFQRGRQEVASEIFTLKKDLLLFRRIVAPERDILNVLLRQEVRIFQPRELAYVRDVYDHLVRLTESIDLYRDLLSSALDSYLSLQGNQLNQLVKVLTLWSIILMACSLVAGIYGMNFVFMPELEQPWGYPFALGLMLTIAVGLGIYFKRSNWW
>NC_011831.1|WP_041470334.1|680444_681926_-|hypothetical-protein
MVSEPVLLLDGMPPVGAVVLERSVVEWSCELPATATAQLVIDGVTLEPFLRPGEHIWRWRWSVPSIAGEYTVRFTATWPDRQFEWCDVVQVAPSLLDAQQYVSLLADLAAIAPALAHALHGGRFGAGSVGYGVSDPAAFAALLTGSATRRLLTTIERLARRPRRQRLQAGGWHELGALRERPDPARWRPAASAAPLPNTGWPDRVWVVTPQTDPLDRGLVVAASLLDRLINLGRWVVLRDVPHATRATLVMVLGRMRALRIRLDVPARLPPSPSAWTPQSADERVLTAYRRLLRRQLGVGWTPELLSIPVRDVARLYELWCTARVTLSLLRLGGSEVLTQTLLAADSTLQITTEHPLLALALPNNTTITLRYQPRYTPDSTPFRSLDDRVRVPDLAIEIAAPNRSPNLIILDAKYRSEAGELPAYVLDEGYSYLAGLGREYGERAVSVLALLFPGHNAPITYASGLTVLPLLPGASCDHLDSWLRHNVLDRIT
>NC_011831.1|WP_012615863.1|679559_680483_+|M48-family-metalloprotease
MAGIARYSLTLLIELVGVALRYIVIEQTGSRLLPVAASEILALIGGIGPPCYSLLAWFGPPGGHWIVRWKLQGRRPTITEQSILTNALRVLANRGISPPDSIYILDQPGLNAGVIGHTLYIHRELLDSPHLAAVLAHEMGHYHSGDGRLALALQRLTIPGGKTLVNSIMHGYDLIGCGLALVFGLMKALVYVLLRVECNFGVRLIRFGRQFVRAVLLTLVGGYGIVVTTYIWRDYLRQRELAADRFAAYHGFAYSLLIFLEQTRLLEMNLPWTDDTFHPAFDERIAALQSYLRHLSGNSVEYVMSKP
>NC_011831.1|WP_012615862.1|678381_679530_+|hypothetical-protein
MRWCLTIVAMVVLAGCSTPVPSAPSSPAPTSLSAVVQPTPGMRILPAPLYILDRGQIARIEADGATRRQLTRERIEFAGIPPISDMDLHPTAGLVYVVGDAQGDRLVRTSLDGDNPETVFFETDYQLSAVRWSPDAQFIYLHLQNNRTTRDRPDGLYRVPATGGTLELLRTDDPVDDPLNPSRSVRSYAPFLWEPSGDSLILASTATFYDDCELVFWRPQDGALQHPVLPDGMQSWCGEAMWRSDQTALMLIGPPEGPGVWQVDTRTLQATRLSAEGTLARAPFFNGTDLLFIAVDRVDDGFTFTLTRQLPDGMVTPLRPPFREVPLLVRWAPDGSGIVALVRTETGTSLRWYPIGEQPAVNLPQTESGTTWLMWGPIPPQG
>NC_011831.1|WP_012615859.1|675583_676054_-|response-regulator
MNVHTEPLVILLVEDNPDHTELIIRALSDHQIPNRIIHVSDGEAALDYLWRRAQFADPATNPQPHVILLDLQLPRLNGLEVLQAIKSSVEMRHIPVVVVSTSYAEHDVSAAYRNYANSYLVKPVDFQQFTRMLHDLGDYWLGWNWPLRERLSPPMP
>NC_011831.1|WP_012615858.1|673431_675531_-|EAL-domain-containing-protein
MNVHVLLVEDNADHLVLAQRSCDQSHIALTLASSLAEARRLLAEQTFDLIVSDLVLSDGRGDELLTHANDDLPLPVVLMTGYGDEQVAVAALKAGALDYIVKTPDSLRDLPRIIERALRERRLLVERRQAEQALRQSERLFRAMIERSSDAISIVDRAGRVRYASPSTRHLIGYAVDGMLAVPINGFAVIHPTDRERVRQLFNKLIQHSGSSVTADFRVRHAKGGWRWIEATASNWLDDPAVQGVIVNYRDITERKLMELRLQHGMLHDSLTGLPNRLLLNDRLLQAIKRSHRNLHYQFALLFLDLDHFKFINDSFGHPLGDRLLVAIASRLSSCLRTVDTCARLGGDEFVILLDDIASPTDAIRIVERILRQVSLPFEIDGRLFHTSVSIGIVFGANNYTDPSQMLRDADIAMYQAKMAGKGRYRIFEPAMREAAQIRLDLEHELRRAVANHEFCVYYQPIIHLPSGRLVGFEALVRWRHPTRGILLPAAFLHVAEEAGLNDSIGWQVLEQVCQQLVVWRRLNPRAAALSVSVNLSARQVMQPNLYDRLMQLLAQYQVPPTALKLELTESTFMEYSHDVAALLNRLREQGIQIAIDDFGVGYSSLSYLVQLPIDQIKIDRNFIVQLESKQHSQAIVNTIVNLAHNLNLEVVAEGVETQGQLDWIRAVGCQYGQGYLIGLPLTADEATQMVQTIELYGD
>NC_011831.1|WP_012615870.1|700946_701555_-|CRISPR-associated-protein-Cas4
MTMPDLETVEVSDIKQWRYCPRVVWYAYCLPAIRPKTDLMRQGAASHRAEEDREARRSLRTYGLKSGERFFNVYLRSERLGVRGILDLAIAVPNRSDPAAKAVVVDYKDSEQPSGPHFKLQVGAYALLIEEAWGLPVETGWIYHIPLRKAEKVPISPQLRRNVLDTIAAVQRAIKTEALPPPPTSRAMCVNCEFRRFCNDVV
>NC_011831.1|WP_012615871.1|701541_701799_-|CRISPR-associated-endonuclease-Cas2
MQCLVIYDIPDDRARQRVADACLDYGLQRIQYSAFAGNLSRAHQRALFNEMTRRVKGRTANIQLFVFDAKTWGERRILEQQYDDA
>NC_011831.1|WP_012615872.1|701814_702828_-|CRISPR-associated-endonuclease-Cas1
MELIVDERGSFIGKHQGRLRVTKDNERLREVPIMHLRQVIICGSGVAISSDAVRACSEEGIPIHFISTNGTPQASLYSAGLTGTVLTRRAQLRAYDGPAGVTLARAFTLGKLGNQANLLRYAAKNRKETAPDIYEQLMTAAGEVVDYQIAVERLKGETVDEIRDELMGIEGRYAARYWKAIGALVPSELNWPGRETRGATDPFNQVLNYGYGVLYGQVEHAIVLAGLDPYAGLLHADRPGKPSLVLDLIEEFRQAVVDRPLLGQLTRGWQIGREEDGRLDQPTRERIVTKVLERLESTEPYEGKRQPLRHILQCQARHIATFVRGERENYTPFVMGW
>NC_011831.1|WP_012615873.1|703038_704016_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MSLTVHHLIFTATAATPVVLAAHSGPAVRGAISNALWNRFCANKSATTCAGCPLFQHCPVAALVAPMRSEDEKGSEQRPRPYVVRPPRDGGKRYQPGDTIRFGLALFGQAEIFFPFIVMAVRELERDGIGIRLAELGHRRGTIKLNTIEAYNPLSGERQMLYPLPGGNVNFPSLPIDATAVQDYAARLPTDQITLTFHTPARLVDQDRLVKQIALRPLIQRLMRRLDDLSRAYGSSPLAIDFRGLLAIAEQVTTTVDQTHWVDVVSVSSRQQRRTPVGGLIGSATFSGSLAPLRELVVWGSLIHVGRNAVKGDGWYTLADMPVLP
>NC_011831.1|WP_012615874.1|704018_706364_-|CRISPR-associated-helicase/endonuclease-Cas3
MNPSPWPHWIDNLLAKSQRYGGETLAAHTWAVLCRLADLYRLRPQIANSDSNRLWHCLYWAAFLHDFGKAARGFQQRLRGGPTWPHRHEVLSLAFVDAIAHGLSEDEQRWVVAAIVSHHRDEAEIAQTYPLGVRNDPLIELCREVDDETVRLLDEWLATCANPWREALGLAMVVEEITPQSVTVDAKRVRYWLQVYHDWVAANDPVARVPGILLRGLITTADHMASAHLHRVPPPITGSWSALAKRLLPQGEQIYEHQRQSGEMKGQSALLMAPTGSGKTEAALYWALGDGTAPPARIFYTLPYQASMNAMYDRLRQNFGDELVGLQHGRAAQALYARFREGEEWSAAARRVQWEKNLNILHARPLKVLSPYQLLKALFQLRGFEAMLTDYAQAAFVFDEIHAYEPERLALITGLMRYLREQFAARFFVMSATFPQLIRRRLTIALGNVPLIRASPEIFTRFRRHRLFLREGEITDPTTITEIVDKVRAGRQVLVCANTVARAQALRDQLAQAGLTDDQLLLIHSRFTHGDRTRLEQRIRSYCGSDVAERPPLVLVATQVVEVSLDIDLDTIYTDPAPLEALLQRFGRVNRRGAKGICPVYVFRQPNDGQGVYGRDRDPNRAGHIVRVTLAELEPHNGEIIDESAINDWLDRIYADPVLSQQWTEAYQRMAQQVELIINGLRPFQSDEQREDEFEQMFDGVEVVPQCFEQAYVDCLVQERLIEANDYLVSISKQRFAILRSQGKLRPAEEAGKRRVWVAQLPYDERNGLSFSDIVIDPDWS
>NC_011831.1|WP_012615875.1|706329_707079_-|type-I-B-CRISPR-associated-protein-Cas5
MRVLKIVLEGITTSFRYPHFMLGVQPTFPLPPPATIYGHICSALGEWFDPDGVMFAYHFTFAGEGQDLEHIHVLSVSSGKLPGGERKVLEGNVNPFKRNILLFPRLTLYLNRPDWIDYFRRPRYPVVLGRSQDLAVYTQIEVIELQQQAQVYFEHTLLPYTMAIQIPAGVVALMPSWIDYRNRRRPIFARYLMLTERVMSKQMLHFGSQKPRYWYDPTAPRIHDEPLGLVFHTFGGTADESFTVASLDR
>NC_011831.1|WP_012615876.1|707352_708444_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAFVTGLFLIDAPASALNNLGNIPGEREDNTVGVKMIATKAGNFPYVSAQAFRYWLRTTLEQRVPEWKASPIFREEKIAYTDANPIRYWDDDLFGYMRAPGKSDTAKKSREQISTLEEATPVKDTITRASPFRVSTLVSIAPVNPTNDFGVMSRHEGNPVPHEHQFYRTTLKGLFSLDLRACGTFSYLNRTGFRNLDDERMRIIKDYPGAEHLEAEKSYRLPKAERLARVKALFTGMAHLEGGAKQTLHYTDVSPALVMFAVTDGGNHIFHHTVGANRIGQPEIKTDALREALRVFADGIRSPVYVGWVKGYLDDARAAFEQFVAEHNANADANGLPRIELSHPREAFVSFVAACDAHQEWLD
>NC_011831.1|WP_012615877.1|708643_710146_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MVNSIGITYTGHPFIDVGFATLAAFANRRHLADLTTNDLAEMANYIEANYVRQPLRSFLTVAFTSNAWFAQSAFNPDRFDDPDKKIEAQQKRKYWADRHLRQWAQAAAALETCLFTGLPAAALELSGKLQPGRVGRAQMPLLQGDDSINFFTNGDPGLPMAPEAILALQAMPLGCAKVGGGLLAVHSDDEQLTIDFAKRFLERNLSDVAKAQAAGEEKLSGSPRSLKTLLIETLAEIIRRQMQEEVRRERRPTVTAYYFNNGQSPSLDIYHLPLQITGFLLAVHTPAYRAIWNELVQRSWQRLETPTKRRKVAEPTEPRFNYLYEDLFTLPAQAARFVRTYFLRIPNRSTATDDPRREYSTRREVDLVSWPLVELFVQEVMLMTDDRVAKLKELGDKLADYTRYQGGKRFFRQFFTVQRSDHFLTLLNKTNIDYTRYKRGTETLFDLDSFLTLFMEGEEVLRNDWRLMRDLVLIRMVEQLRDWIANNADAIPSEEEVVEA
>NC_011831.1|WP_012615878.1|710486_711440_-|WYL-domain-containing-transcriptional-regulator
MTRLERLIGIDAMIRSGRYPSVADFCQRFEVSERSIYNDLAYLRDRVNAPLDYSRQHGGYYYRDPTWVLPIIQVSEGELLSFLLSIELSRRYLGSVFAAPLRNLLSQLQHYQITIDPNDLLTHVTFQPGAVAPVDPALLNDVSVCIREQHPLEITYFTAVRRECNDRVIEPYHLYLARGDLYVIAYDHLRHTFRQFALCRIKRWQVQYQRRFQRDPTFDAAAYLRHAFVSEVGDRPVTVAIAFDREQAPYIRERQWHSTQQIEELPDGGLILRFENGALGEIKRWVLGYGAHARVLAPPELVQMVAVELQRAAAQYT
>NC_011831.1|WP_012615879.1|711510_711741_-|helix-turn-helix-domain-containing-protein
MFGSKQGKQARLRRYAELLACGPLTAAELAHRLGVPRSTVIRDLPLLEEQGILLAEDHAGRLSLVRCALSSNCGDV

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Crispr_ID: NC_011831_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_4

898104-898372

TypeV-U4

Consensus_repeat	Method
CTGGCCACCGCCCTCGCCCACGCCGGGCA	PILER-CR

3 spacers

The CRISPR arrays of NC_011831_4

>merge|NC_011831|4|898104-898372|PILER-CR
CTGGCCACCGCCCTCGCCCACGCCGGGCACGCACAGGCAGCCGAAGATACCTTTACCGCCGCCCGCCACGCCGCCGACGCGATTGATAGCGAATATCGCCGCGCCGAGGCGCTGACCGAACTGGCCACCGCCCTCGCCCACGCCGGGCACGCACAGGCAGCCGAAGATACCTTTACCGCCGCCCGCCACGCCGCCGACGCGATTGCTGACAACCGTACCCGCGCATGGGCGCTGACCAATCTTGCCACCGCCCTCGCCCGCGCCGGGCA

>NC_011831|4|3|898104-898372|PILER-CR
CTGGCCACCGCCCTCGCCCACGCCGGGCA	CGCACAGGCAGCCGAAGATACCTTTACCGCCGCCCGCCACGCCGCCGACGCGATTGATAGCGAATATCGCCGCGCCGAGGCGCTGACCGAA
CTGGCCACCGCCCTCGCCCACGCCGGGCA	CGCACAGGCAGCCGAAGATACCTTTACCGCCGCCCG
CCACGCCGCCGACGCGATTGCTGACAACC	GTACCCGCGCATGGGCGCTGACCAATCTTGCCACCGCCCTCGCCCGC
GCCGGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012616008.1\|890091_893292_+\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235681
NC_011831.1\|WP_012616001.1\|878493_879219_+\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|379207
NC_011831.1\|WP_012616012.1\|900497_901259_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NC_011831.1\|WP_012616022.1\|909693_910932_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NC_011831.1\|WP_012616014.1\|902911_903295_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380435
NC_011831.1\|WP_041470893.1\|907389_908718_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NC_011831.1\|WP_012616021.1\|909226_909697_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NC_011831.1\|WP_083768861.1\|887569_888193_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NC_011831.1\|WP_083768860.1\|880765_880990_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379248
NC_011831.1\|WP_012616018.1\|906366_907308_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NC_011831.1\|WP_012616002.1\|879242_880025_-\|DNA/RNA-nuclease-SfsA	unknown	unknown	gnl\|CDD\|234733
NC_011831.1\|WP_012616010.1\|894415_894865_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_157044821.1\|882384_887565_+\|alpha-2-macroglobulin	unknown	unknown	gnl\|CDD\|225248
NC_011831.1\|WP_012616007.1\|888189_889794_+\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|381626
NC_011831.1\|WP_012616013.1\|901445_902705_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238742
NC_011831.1\|WP_012616023.1\|910938_912534_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NC_011831.1\|WP_012616004.1\|881292_882297_+\|homoserine-kinase	unknown	unknown	gnl\|CDD\|270702
NC_011831.1\|WP_012616017.1\|905514_906354_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NC_011831.1\|WP_157044822.1\|904452_905505_-\|UDP-glucose--hexose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|236963
NC_011831.1\|WP_012616000.1\|877243_878458_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340949

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012616008.1\|890091_893292_+\|isoleucine--tRNA-ligase	gnl\|CDD\|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NC_011831.1\|WP_012616001.1\|878493_879219_+\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|379207	pfam13472, Lipase_GDSL_2, GDSL-like Lipase/Acylhydrolase family. This family of presumed lipases and related enzymes are similar to pfam00657.	9.5094e-18
NC_011831.1\|WP_012616012.1\|900497_901259_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	6.17619e-129
NC_011831.1\|WP_012616022.1\|909693_910932_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.36196e-66
NC_011831.1\|WP_012616014.1\|902911_903295_-\|hypothetical-protein	gnl\|CDD\|380435	cd20301, cupin_ChrR, anti-ECFsigma factor, ChrR , cupin domain. This family contains bacterial anti-sigma factor ChrR from the photosynthetic bacterium Rhodobacter sphaeroides (Rsp) and similar proteins. ChrR is a member of the ZAS (Zn2+ anti-sigma) subfamily of group IV anti-sigmas. It inhibits transcriptional activity by binding to the Rsp extra cytoplasmic function (ECF) sigma factor E (sigmaE), an essential factor to mount a transcriptional response to a singlet oxygen and for viability when carotenoids are limiting. ChrR comprises two structural and functional modules; the N-terminal anti-sigma domain (ASD) binds a Zn(2+) ion, contacts sigma(E), and is sufficient to inhibit sigma(E)-dependent transcription. The ChrR C-terminal domain adopts a cupin fold, can coordinate an additional Zn(2+), and is required for the transcriptional response to singlet oxygen, a potent oxidant that damages cellular biomolecules and can kill cells. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	0.000100971
NC_011831.1\|WP_012616021.1\|909226_909697_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.59531e-23
NC_011831.1\|WP_083768861.1\|887569_888193_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	2.35336e-13
NC_011831.1\|WP_041470893.1\|907389_908718_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.24245e-80
NC_011831.1\|WP_012616018.1\|906366_907308_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	8.11097e-81
NC_011831.1\|WP_012616002.1\|879242_880025_-\|DNA/RNA-nuclease-SfsA	gnl\|CDD\|234733	PRK00347, PRK00347, DNA/RNA nuclease SfsA.	1.2129e-71
NC_011831.1\|WP_083768860.1\|880765_880990_-\|hypothetical-protein	gnl\|CDD\|379248	pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat.	1.33688e-06
NC_011831.1\|WP_157044821.1\|882384_887565_+\|alpha-2-macroglobulin	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	1.82976e-31
NC_011831.1\|WP_012616007.1\|888189_889794_+\|glycosyl-hydrolase	gnl\|CDD\|381626	cd19608, GH113_mannanase-like, Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.	0.000379398
NC_011831.1\|WP_012616013.1\|901445_902705_-\|VWA-domain-containing-protein	gnl\|CDD\|238742	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the VWA domain in these proteins. The members do have a conserved MIDAS motif. The biochemical function however is not known.	4.61074e-43
NC_011831.1\|WP_012616023.1\|910938_912534_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	1.13277e-05
NC_011831.1\|WP_012616004.1\|881292_882297_+\|homoserine-kinase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	5.48016e-69
NC_011831.1\|WP_012616017.1\|905514_906354_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.14789e-82
NC_011831.1\|WP_157044822.1\|904452_905505_-\|UDP-glucose--hexose-1-phosphate-uridylyltransferase	gnl\|CDD\|236963	PRK11720, PRK11720, UDP-glucose--hexose-1-phosphate uridylyltransferase.	0
NC_011831.1\|WP_012616000.1\|877243_878458_+\|MFS-transporter	gnl\|CDD\|340949	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.35213e-104

>NC_011831.1|WP_012616010.1|894415_894865_+|hypothetical-protein
MTQPTGLLITFRPADTDGANPALVNRVAREVVNSLRQQQHTIEPAYTTLRSGDVYRWLVTAADAAQTLLPLVTFSAAVVQLLNELKKLTAKPDSPKPTVIIINYNAGQTAIPADSDEALLTQLLRERLPERIDPAQTSIEVQIAAPDPW
>NC_011831.1|WP_012616008.1|890091_893292_+|isoleucine--tRNA-ligase
MFKPVDPNVKFPQLEEEVLAWWDANDVVAKSLAAGEKPFVFYEGPPTANGRPGLHHTISRSFKDVILRYRSMQGYRIIGRREGWDTHGLPVEIEIEKKLGFSGKPDIERFGIAEFNRLCRESVWEYIQEWKAFTKRIAFWLSEDAYITYENDYIESTWWIFRQLWDRGLLFRDYKVTMHCPRCGTSLSDHEVSLGARDDVDDPSVYIKFRVKGTTLPPPAVDGTLEGAFLVAWTTTPWTLPANVALAVKHDAEYVEVEHNGERLVMAATLINQVLPAESFTVLRRFRGNDLVGLRYEPLFRGVPGAGDTVDWETAYRVIADEIVSLDDGTGIVHIAPAYGDLEVGRKHGLPTLFSVGLDGRVLPEFADLGFAGKFFKEADPDITRNLKARGLLLRSGRVRHYYPFCWRCGTPLLYYAKRSWYIRTTAFKADLVANNQQIHWVPEHIRDGRFGNWLENNIDWAISRERYWGTPIPIWTNADGSHMVCIGSLAELEEKVGRSLRDLDLHRPYIDEVVWEDPDHGLMRRIPDVADCWFDSGSMPVAQWHYPFENRDVFEMSHPADYICEAVDQTRGWFYTLHAVSTLLFDRPAFKNVICLGHILDKDGQKMSKSRGNVIEPQEVINAYGVDALRWYLFTAAPPGNARRFSMDLVSESMRKFLLTLWNTYAFFVTYANLDRWQPNSGRTAELQPIDRWALAALNQLVQTATAAFEEYDVYSAANAIEHFVDELSNWYVRRNRRRFWKSEGDADKEAAYQTLYTCLVTVAKLAAPFIPFVSEEIYRNLVAERDASAPESVHLARWPEVDQALLDDQLVADTEALLTAVSLGRAARKQANIKVRQPLSELWLRASTPALLNGVRRFEAELRDELNVKVVRYLDANSAVVEYRLKPNLRLVGKKFGKLVPAITTALRDLTGDDARAAAQAVEAGQPVHLSVDGQTIELLAEEVLVESSAPAGYAVAEADGMLVALNTTVTEELRLEGAARDLVRYVQDARKSAGLAISDRIRLFLSSTDEAALLAATLAQHGAYIQNETLAVELTVSAPPAGAHVETDEFGDGEITIGVVKAG
>NC_011831.1|WP_012616007.1|888189_889794_+|glycosyl-hydrolase
MRALLHLTFLLTAAVMFVADAPTLHRPITQPIAIRTPTGPLAIGINSHLATRYPDAATMAIPAAIVADLGVQWVREDLHWHRIQPQPDVWDWVFTDAALYALSRQDVRILGVLGPSVGWATADPTDRPNLISFAPPDEDAFVTYAGAVVQRYKHLIKHWQIWNEPDQTLFWRPSPDPARYTRLLIATAQTIRTIDPTATIVLGGINPFDTGFLRAIAAYGGWNAFDVIAIHPYVDPLNPEEGNLIAAADGVRAVAARYGMKPIWATEVGWASGPGDRDALGLTNATLQAAYLSRTYCALWYGGVSAVFWYMLKDDPHNPYGLFAYGSGRADFSTPKPAVTAMRELPDTLAACHLEPPTTTIPLLTGSQPVQWRRPSQPNGSLRLIEHDRVFHISYRFTTRMNDYVAFALSNPIPLPDDTTAITVQLFGDGNGHRLRLWLRDSEGETFSLTAGIIGPPAWQTINTPLSRRPMQYELIAGNGNRQPDAPLALAAIVIDDEDDTWTGMGEVLIERIAAVRTTLDAASLPTYTVTQRR
>NC_011831.1|WP_083768861.1|887569_888193_+|GNAT-family-N-acetyltransferase
MVKPDSTPASTRRSMDKTILTTPRLWLRVMAPCDNEAVRGYFYRAWTFGEDWLPIPPADFFTLQGQRRRLAAEETMRATGRNLRLFLVRRDDPFERICGDIWIDCIDRLVYHTALIECRMEERSSRKGLMSEALACVIAYAGQTLGLHRLEALIAPQHHPARRLVERCGFTPLSGVTCWRQIGQGWVEHQVYTITLTSSLLDHGHHR
>NC_011831.1|WP_157044821.1|882384_887565_+|alpha-2-macroglobulin
MSTRIPHWLGVLARLWTIMLFGVVVSLLGGLAIRWFAPALPWAETPTVQLRDPLPQSQVVPPRSTITLVFSTPMNPFTVVRALRIDPPIAGKLEWSEDRRSVRLIPDQPLQPATTYRVQVMTNAQSQWWRPLARSLDVEFTTAAQPTVTAALAPQSRTAPIALIFSRPMVDPDTIGQPASLEQIRISPPLQLNGEWLDRQTLLLQPATAFTAITTYTLTLDANLRDARGIELGQPFQWQFTTPWPILLEQTPLPDEQWVNPQQPLTLVFDAPIDTRLLSSALTITPAVSGNFSSFTDGDRYITIFTPHNGWSPGQTYQIRLQPDPSGEPVAAWRFTVEPEPLLIASFPGQGQTLAPGQAIRLIFSTPMDEAELRAGLRIDPPVVKLELEVDENRITLQPLLQASTTYTITIAAGTRDRSGVPLAHDVSLTIRTASASPQLQVIGEIVLSFPANVQPVVTIERMNLSVIDGQLYQLDPSTLIRALSLRPNEWASFVPERYGQPLVRAWRELLNDPADTLVRSLLPITANSAGDPLPPGAYYLRMTASAGLRADRLLLISSLNLSLLVNNDELLLWVTTGGTGTPAGNIPLTVYTGETVLARGTSDDQGLWRVPLTGLSTGNSSSPLPIIALAEGNGLTLARAELTTTQPRVQALLAPDRLSYRPGGVVRINGVARAQQPDGRLMLPTSGNCTIQLDGPNLNDQPPAVDCTVSNTGIVSGSLQLNARTTPGPYTATVVIGDSVYRLPIRVRGPSTGTAVRIMPARPAGLAVDVTRAGLPVSGATISWTLRLETLSVAELDGVNGVVIGGVSENQASATTDASGRAMINLPADENLLRPLRYQLALTVLLPDGEQLSRETEGVITPRSPRLVLDAPAIVERNERATITMWLRTADGAAIGNTLVELEVRRNPTDPPLIVRRVRTNNDGQTSAELVPLAPGRYELTARAGTALSRHSLWVAGFGLSTAEPQIIPDRSSYTVGETARVLITGPAGGRTLLLVIGQGATAQTIITAAQPGTVLDIPISADLAPITLLTALIDDGVRHWMTSTTISIDPPPPPELNISQPDVLPGATVTFTVTAATDTLLVVLSLLHSPPVDLTPWNQPLAPLTRAPGQQTGLDGIILPASIQSHQNQHTISVTMPNQLGRWRLSVIAVYPNGIATIAGALLDTNQPIEAIAIPLPAPRPPDTVTATLILRNLSGQDRTVRSRLWLSDGILLDPLEQTTTVPAGATVPIAWRLQPQPNANLVGLRYEVIDTISLPPIEYAIPVWRDPPLPTTDQTYVATDPITITLPDGNNEVVIAASVRAALADQAQRLLQTTPPTAETLAAAIVIGRELERTATTTAEADRWRTAIENVLPPLRSLRNPDGGWGWWPNTASDPFITAFVLEAIGRLPSPSAERRELSEPALSYLRRTRLTQPADAQAYINYVMSLYGANPTPPTLPTGAGPAGRAFTALQLPNERDTLLNPLRVSASSRLPWAGAEGLPPSTLAVSASVIQALAQDRPSDPRLTHWRTTLMRTWQIDGRSTPYEAARVALALNTTLLAEDGEVQVFHNDTLITDRPLGDVARFRFNGGTLRIEPAQTAALITVRSPASPTQPNNVRARLQYLTNTNSLTVDRPVQIELIVITTQPLFRLDVAVPLPAGLTPLAVDAGTELTVQQIDRERRQVRLGGVRLARGVYRILITAQTTATGSFTVPSAFISMPGSDLAPVVAEWQTMIAITPKIDE
>NC_011831.1|WP_012616004.1|881292_882297_+|homoserine-kinase
MLTHDDIARVLAYYDIGELRSSRPASHGAINETAFIETTVGRFVIRRNRRQQGFQAIRLRHRLLEWLRQRGFPAPRVLPARNGDTVVILNDRVYELSVFIIGDEFNPSRPRQLSDIGRVLASYHRAVSDFPDPPPEPPPRYLPSSLGSLTERLITRDILGDLTNALHWYERRIAELRRRLSDEAYATLPHLLIHGDIHRDNLIFRGDAVAALIDYDQIGIDARLVDLVDGLVDMAIGAPPPNWSMWGVYRAPLDIERVKLLLSAYNAIAPLSTSEVNALPALLETVWLQGNLRRVLSTPDADPDYHLELLGQGRWLSEWMDRYREQVIAAAMVY
>NC_011831.1|WP_083768860.1|880765_880990_-|hypothetical-protein
MNSIMRRTPVDVVGLPSGVAAIAVGGQHTCARTATGGVTCWGSNFSEQLGDGRALYRTTPVDVVMSAQGQYTYR
>NC_011831.1|WP_012616002.1|879242_880025_-|DNA/RNA-nuclease-SfsA
MNTGHGTGQQIHPIVRVPFSAGVPLIEATFAARSGQFLVEAQMGGRMVRAHVADRGRLVDLLVPGARLLLAPREEVGRKTAFQVVAVYQDSDLVSLDTQLPNRLVAAALSLRALPQFARYGTVQREVQLGPHRIDFRLSEGLDTCLLEVKSVTRVIDGVAVFPDAPTERGSQHLELLTNAARNGQRAAVVFIIQRSQGVAFAPDETIDRAFSRALRTARALGVEIYAYLCPVTPTGITLGHEVPVFMSLSAVPSELRRRL
>NC_011831.1|WP_012616001.1|878493_879219_+|SGNH/GDSL-hydrolase-family-protein
MDRRLVWIVGIVTSGTVLVAGFLGWQRAFQYERLFHLVRLDPLGLNTVRSTPTMPATIVFVGDSRAAAWPVPTGFTIDNRGVPGHTTIQTRLSYPLLVSPLKPQWVIIQVGVNDLTALEVFPHDAEMIIQNTITNLRAIIDLARTDGSRVILTTIFPLGPNPFERINPGTGLIATGIERVNSAIRAMAAPDVLIFDSSAVLAANDGFVAEGYRLDLLHINQAGYRALNEALSPLLTAHIGP
>NC_011831.1|WP_012616000.1|877243_878458_+|MFS-transporter
MQTRWQTTLWIMFVAQFLSAIGFSIIFPFLPLYVAYLGVATVGDIALWSGLVFSLQALTMAIAAPIWGSLADRFGYKLMVERAMYGGAIILLLMGFARSAEELTLLRAIQGMITGTISAANALVATVTPRERMGFAMGTLQMGLWSGTATGPLIGGLMAETLGFRATFITTAALLLVSGILVTIGVRGGRPAPVKPKQQPSGMLRGWLTILRTPGIGPTYGMRFLSSLAQTILLPFAPLFIASLLSAGDPVNAFTGLIVGVSSAAGTATAIWLGRLGDRIGHRQVLMGSALLAGLTFAPQGLASNVWQLLILQALSGAAIGGITPSLSALLGRYTATGNEGAVYGLDSSIVSAARAVAPLFGALVVGPFGYGAAFAVSSVACFAIGIGAARLPTEERQIVSKPT
>NC_011831.1|WP_012616012.1|900497_901259_-|5'/3'-nucleotidase-SurE
MYILVTNDDGYQSPGLAALRAVLSEIGEVAVVAPDRNWSAAGHYRKLFDPLRAWEGTLSDGSPALICDGTPADCVALAILGLLDRKPDLVVSGINLGANLGTDLLYSGTVAAAMEGIVFGVPGLAVSQIRPKDGQWDFRAAQVAVRRLVMLIRERGLPPELLLNLNIPAVTPETLRGIKVSRLGRRVYRDELVVRYDPRGRPYYWIDGAEPEDHCEEGTDIAAISEGYASLTPVQMDLTSHRWLEELRRWEWE
>NC_011831.1|WP_012616013.1|901445_902705_-|VWA-domain-containing-protein
MAGEVSLRAVLARPFLAATTTPQVAYVLLEAQPAPQMTQVRMPVNVCFVLDRSGSMKGEKIERLRQAVVKAIELLDQQDSLAIVIFDHRTEVLVPAQPVRNRAMILDLVHRIRDAGGTRIAPAVEKGLQELQKMPPGVRRLILLTDGQTEHENECLLRADDAGRLGVPITALGIGKDWNEDLLIEMANRSKGVADYIAQPGEIVNYFQHTVQRAQQTVIQNSVLTLRFVQGVTPRAVWQVTPLIDNLGYQPIGDRAVSVKLGELEGSQPRILLIELLIDPRPLGTYRIGQAELSYDAPALQLVGEKAKLDIMLTFTNDPAQLQQVNPTVMNIVEKVSAFKLQTRALQDLAAGDVSGATQKLKSAVTRLLNQGEVELAATMQQEIANLEQQGQMSSEGQKTIKFQGRKTVRLTDIELPKE
>NC_011831.1|WP_012616014.1|902911_903295_-|hypothetical-protein
MEEEQLSDGATHLSGLELVAAVDGEADETILAHLNECPLCRRRVATLRNLQHALRYRLYRVLCPSTDLLVDYCQGLLPPAQQARIAHHVASCPYCRSEVDLLMQRDPLIDRLLLASLLNGRVMRYRR
>NC_011831.1|WP_157044822.1|904452_905505_-|UDP-glucose--hexose-1-phosphate-uridylyltransferase
MRMRHHELFSRPHRRLNQLTGEWVLVSPHRTQRPWLGQVEQLPPTELPTYDPTCYLCPGNTRANGTRNPAYTTTFVFENDFAALLPDVPFERVSVRAGGDASGPILLHAEAERGICRVVCFSPRHDLTLAQMTQNEVQQVVEVWVAQYNELAAIDWVQSVLIFENRGAMMGASNPHPHGQIWANEQLPNEMRKELATQTAYWQEHDRCLLCDYLALELSLGERIVCANETWVALTPFWAVWPFETLVLPRAHVGAIGDLADEGRAGLAAILRELTARYDRLFNVTFPYSMGFHQRPTDSLPHDGWHVHAHFYPPLLRSATVRKFMVGYEMLGQPQRDVTPEQAAARLREV
>NC_011831.1|WP_012616017.1|905514_906354_-|carbohydrate-ABC-transporter-permease
MANVILRRPWERVLAYAVLSVTGFVMVFPFIYMLLSSLKPSTEVVQVPPTLWPSEIRWTNYLEVLNIVPLGTQLINTVIVTVFVVLGWVITSVLAGYAFARLEFPGRDWLFGAYLATLMVPFAVLIVPMYRLMLVFGWVDRLEALIIPWLFTAYGTFLLRQFFMSIPKDLEDAALIDGASHWGILFRIFLPLARPAIATLATFAFLYAWNSFLWPLIIISSPTRKVVTQGLVDLQALYAARVDLIMAGSTLAVLPTLIVFLFAQRYFIEGIATSGLAGR
>NC_011831.1|WP_012616018.1|906366_907308_-|sugar-ABC-transporter-permease
MAKQAPAALPTLSARRLSGRQVRQWLDAFGMLLPTILGVLIFFLVPLAISFYLSFTDARLFGDPNLVGLNNYQRALSDPTFYRAMWNTAAFSLVTLIVSTVPALLLAVILNERIIGRTFFRAVFFIPVVASVVGVTLLWRYLLNVDFGFVNYAIRLLGFEPIPWLTRPEWGLASVILVFSWKTIGYNMVIFLAGLQGVPPQLYEAASLDGAGRWQQFLFITVPMLSPTTFFVLVTTLINCLQIFDVPIALGLTRSNTVGSADSMLTIVPLLWREAFIGGRMGYASALAWLLFVIIMVLTLIQFRVSRRWVHYE
>NC_011831.1|WP_041470893.1|907389_908718_-|sugar-ABC-transporter-substrate-binding-protein
MLRKHTLSWIALIALFTVMLAACGGGQPTTGSGSGGQSGSSANTGGSGQAVTIRWRTRPGDAAEQRVYEELNTLVNEKLKDKGITAVYDPAPNQGYFEKLKTELAAGNAPDIFWIGGVELADFVNTGQILDLKPLIDADSSFQLSNFYPNVIEQLTRDGKIYGLPRDISTMVVYYNEDLFKAAGLKTPKELAAEGNWNWDTMLEAARKLTDPAKQQYGLGFGNWWGPAWGYFVNAAGGSPFTPDRRGCALNSPEAINGAKMVRMLYDEKLLPAGDADGEALFNAGKVAMYFNGRWFTPGVRTNAQFNWDVAVMPEGKVKSTWLFWGPYLVNAKTANAQAAWEVLKVLTSAEATAKVAALGTNIPPRSDQEAVNAFLASTPPANNQAFLDGIPYAALEAPVWDGSWADFSGIVQSLWDQMIAGQITPEQFGQQACEQAASTFK
>NC_011831.1|WP_012616021.1|909226_909697_+|MarR-family-transcriptional-regulator
MPEISTCDSPQIEAYRLFLKLHRRFQELNREEFRPYDLSTPQYAILFYATEEGVPLSYICNEMLADNSNLTRLVDRLERRGLVRRATDPRDRRVTLVQLTPAGKALIDELRPRHRRLVEQRLSYLSPEELTAFHQAMQHLYDALQTHQDQETPPNL
>NC_011831.1|WP_012616022.1|909693_910932_+|MFS-transporter
MSTSTALSSSRHRAAIFRALRHRNYRLFFIGQLISLTGTWMQSVAQGWLVLRLSDSPFLLGAAAAANSLPVLLLSLFAGTIADRFPKRRILLITQSTAMVLAAILAFLTFSSVVQIWHVLILALLLGVVNAFDAPARQAFTVEMVGREDLLNAIALNSSIFNGARTVGPALAGMVVAWIGEGPAFLFNALSFGAVLTSLLLMRLDTQLHRGSQRGGMLRAGLAYIAGEPHVRALLLRAGAVSFFCFVHIPLLPIFARDILQIGATGLGWLSAASGCGSLVAALILAQLRDDAPRGKLLSIAATMYAPLLIMFTQVRSLSFALLFIGLCGWAGVTTMALTNTLIQLTVPDELRGRVMSVFTLLLMGLSPLGGMLAGSIAELVGSVPTVIAGSAVIGWLLVLLVEWQTPQLRRL
>NC_011831.1|WP_012616023.1|910938_912534_-|hypothetical-protein
MSETEPSPNPLPPAPRLNRDTLLLLGALALLGLGVALTFVFSPGINDVSTPSPVPSVIGTRPPTQVGVYPGIATTVPAGGAVTSSPAYPVDQPTTLVSNLAQTQTSVVVEITALAATVQAESVVTATTVPAYPVPEGTPPALPTIPPTATFTPSVPPPTILPPTVPPPPTPTSADLVIDDSPTVPPLPTAILVPTATPAPTPIPALVLRGSTRWAAGQGPIVLNRDVQIPAGSELIIEPGVEVRLAPGVAIYVDGGRMIALGQPDQPVRFVAATGTRWSGIFGRPGGFIALEHTDIRGGGLGGVVLVGEEGGLVVRFSRITDNGGGVLVADSQFELSYSEIAGNDIPFGAALEVSYSRGNSVKLIGNRIAGNRLSTGAPMVRLANQNARETLNLTVEGNLFRGGSANLQLTTNGILQGSVVCNALVGDNLGLSVRTETLQVKPDGTFLMPLRIEQNRIEGHTPVIRPTYLTFGIGRGAASEIALDMRNNWWGHASGPYEPDSNPLGSGDAVGSNITFAPWLTAPPSCVPVQ

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Crispr_ID: NC_011831_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_6

1096279-1096367

Orphan

Consensus_repeat	Method
TCAAGCCATCGCCGTCGGTATCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_6

>merge|NC_011831|6|1096279-1096367|CRISPRCasFinder
TCAAGCCATCGCCGTCGGTATCGGTATCGAGCGGGTTCGTGCCGAGAAACTGCTCTTGGAAGTCGGTCAAGCCATCGCCGTCGCTATCG

>NC_011831|6|5|1096279-1096367|CRISPRCasFinder
TCAAGCCATCGCCGTCGGTATCG	GTATCGAGCGGGTTCGTGCCGAGAAACTGCTCTTGGAAGTCGG
TCAAGCCATCGCCGTCGCTATCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012616164.1\|1099504_1100713_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NC_011831.1\|WP_012616168.1\|1105814_1106663_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NC_011831.1\|WP_012616155.1\|1079229_1080669_+\|deoxyribodipyrimidine-photo-lyase	unknown	unknown	gnl\|CDD\|223492
NC_011831.1\|WP_085953496.1\|1101892_1104097_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616174.1\|1115690_1117010_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213260
NC_011831.1\|WP_012616170.1\|1109351_1112516_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224206
NC_011831.1\|WP_012616153.1\|1077808_1078861_-\|Holliday-junction-branch-migration-DNA-helicase-RuvB	unknown	unknown	gnl\|CDD\|234619
NC_011831.1\|WP_012616165.1\|1100758_1101889_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NC_011831.1\|WP_012616150.1\|1075101_1076034_-\|DUF3445-domain-containing-protein	unknown	unknown	gnl\|CDD\|378763
NC_011831.1\|WP_012616167.1\|1104162_1105818_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240532
NC_011831.1\|WP_012616158.1\|1083488_1083863_+\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|225876
NC_011831.1\|WP_012616156.1\|1080661_1081510_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379313
NC_011831.1\|WP_012616159.1\|1083977_1084877_-\|peptidase-T	unknown	unknown	gnl\|CDD\|271338
NC_011831.1\|WP_012616169.1\|1106858_1109246_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616157.1\|1081757_1083455_+\|peptidase	unknown	unknown	gnl\|CDD\|366791
NC_011831.1\|WP_012616172.1\|1113991_1114837_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377587
NC_011831.1\|WP_012616151.1\|1076026_1076977_-\|homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|181899
NC_011831.1\|WP_012616149.1\|1074444_1075056_-\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|377965
NC_011831.1\|WP_012616152.1\|1076986_1077805_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NC_011831.1\|WP_157044826.1\|1112536_1112857_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012616164.1\|1099504_1100713_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	8.48578e-56
NC_011831.1\|WP_012616168.1\|1105814_1106663_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.47317e-20
NC_011831.1\|WP_012616155.1\|1079229_1080669_+\|deoxyribodipyrimidine-photo-lyase	gnl\|CDD\|223492	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair].	0
NC_011831.1\|WP_012616174.1\|1115690_1117010_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.04585e-109
NC_011831.1\|WP_012616170.1\|1109351_1112516_+\|hypothetical-protein	gnl\|CDD\|224206	COG1287, COG1287, Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only].	6.49141e-05
NC_011831.1\|WP_012616153.1\|1077808_1078861_-\|Holliday-junction-branch-migration-DNA-helicase-RuvB	gnl\|CDD\|234619	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB.	0
NC_011831.1\|WP_012616165.1\|1100758_1101889_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.1241e-74
NC_011831.1\|WP_012616150.1\|1075101_1076034_-\|DUF3445-domain-containing-protein	gnl\|CDD\|378763	pfam11927, DUF3445, Protein of unknown function (DUF3445). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 264 to 418 amino acids in length. This protein has a conserved RLP sequence motif. This protein has two completely conserved R residues that may be functionally important.	4.53303e-73
NC_011831.1\|WP_012616167.1\|1104162_1105818_-\|hypothetical-protein	gnl\|CDD\|240532	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. This family might function as a translocase for lipopolysaccharides and participate in the biosynthesis of cell wall components such as teichuronic acid. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	7.90591e-07
NC_011831.1\|WP_012616158.1\|1083488_1083863_+\|DUF1232-domain-containing-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	9.07475e-17
NC_011831.1\|WP_012616156.1\|1080661_1081510_+\|hypothetical-protein	gnl\|CDD\|379313	pfam13650, Asp_protease_2, Aspartyl protease. This family consists of predicted aspartic proteases, typically from 180 to 230 amino acids in length, in MEROPS clan AA. This model describes the well-conserved 121-residue C-terminal region. The poorly conserved, variable length N-terminal region usually contains a predicted transmembrane helix.	1.553e-07
NC_011831.1\|WP_012616159.1\|1083977_1084877_-\|peptidase-T	gnl\|CDD\|271338	cd04702, ASRGL1_like, Metazoan L-Asparaginase type 2. ASRGL1 and similar proteins constitute a subfamily of the L-Asparaginase type 2-like enzymes. The wider family includes Glycosylasparaginase, Taspase 1, and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue. ASRGL1, or asparaginase-like 1, has been cloned from mammalian testis cDNA libraries. It has been identified as a sperm antigen that may induce the production of autoantibodies following obstruction of the male reproductive tract, e.g. vasectomy.	3.38897e-113
NC_011831.1\|WP_012616157.1\|1081757_1083455_+\|peptidase	gnl\|CDD\|366791	pfam01752, Peptidase_M9, Collagenase. This family of enzymes break down collagens.	0.000120848
NC_011831.1\|WP_012616172.1\|1113991_1114837_+\|hypothetical-protein	gnl\|CDD\|377587	pfam06013, WXG100, Proteins of 100 residues with WXG. ESAT-6 is a small protein appears to be of fundamental importance in virulence and protective immunity in Mycobacterium tuberculosis. homologs have been detected in other Gram-positive bacterial species. It may represent a novel secretion system potentially driven by the pfam01580 domains in the YukA-like proteins.	1.35778e-06
NC_011831.1\|WP_012616151.1\|1076026_1076977_-\|homocysteine-S-methyltransferase	gnl\|CDD\|181899	PRK09485, mmuM, homocysteine methyltransferase; Provisional.	0
NC_011831.1\|WP_012616149.1\|1074444_1075056_-\|SH3-domain-containing-protein	gnl\|CDD\|377965	pfam08239, SH3_3, Bacterial SH3 domain.	1.81394e-06
NC_011831.1\|WP_012616152.1\|1076986_1077805_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	6.37608e-70

>NC_011831.1|WP_012616159.1|1083977_1084877_-|peptidase-T
MTTESLIALIVHGGAWAIPDDQVAAHIAGCEAARAAGWQCLQRGGSALDAVEAAVRVMEDDPIFDAGTGSVLNSAGMVELDAAVMDGRTLRYGAVAGVRQIRNPITLARHVLTGPATMLVGPGAEVFAVSVGMTLCTNEELIVERERRLWLEWQARGAPPPSATDAHDTVGAIALDRAGNLVAANSTGGTPFKLPGRVGDTPLIGCGLYATPVGAAVCTGWGESITRVALARRVVELLEAGIAPQEAAERGIRLLGELVPDGRGGVIVLTADGSVGLAWNTPRMAHAYIDGRGVAHSGV
>NC_011831.1|WP_012616158.1|1083488_1083863_+|DUF1232-domain-containing-protein
MLTTLKRHAHTLKREAYTLYIALRDPRVPWYTKVLLALVVAHTFSPIDLIPDFIPVLGYLDDLILTPLGIWLALKLIPPEVIHAARQQATTLDEQGKPVSRIGAMMVIGIWLIGLIGLLWWWFS
>NC_011831.1|WP_012616157.1|1081757_1083455_+|peptidase
MRYLIVGFVVLILLIPSGSRLPLAVTPAYPPPIRLPACPQPTVADVDAMLALLPQAGYDCTEQIAVALRPRIEPVYVQELLAIAVEPTFDTRTRRNALRILGRLAESGPVTRARELMVQQQSMVQMTALTLLERERDNFLLQDAVWLLDSHYYPSWVAAPALEQIALGGEYAPALRYRAARARARLIAAEYGPLRDDSQRFIVAALRSADPGVRTAAAEAISFLRDDQLTARTDWLQLVEEALVHEPPLHVATDSGDPRGAALLTFLESTPTTLTARAALARAADRLAGETATVPRLNALRIAYEHLALPLQHESATVVLRTGPAETSDGDELLAIVATTYAQARRFLGSVGETPIPGEEHLPLQVLIFPGQAAYRDYMRAFTPFTVDVDGIYDVQQNTLYSYRRRDDQTANTLAETLRHEVAHAVTAAYLFPGQWHTPGYHAEPKGWFDEGFAEVLAAQTKPDAPLQPHPRHLATICAQPLKPALADLVALRTGYDQYGTFDYPAAWALMHFLLAERPAAAAALISAWRNQTYHLANWPTLGGWSDWTSAESDWHFAIERWCRL
>NC_011831.1|WP_012616156.1|1080661_1081510_+|hypothetical-protein
MLDDRTELHFPANGMTEVPLLWQPQVVRCHAAGPGGRPLHVLIDTGTDPSAIDLTLARRLDLRIGDFALGSDAASDAVPFTETMLPWLRIGTLTLRHLYLMAVDLSHAPFPVDVVLGYNVLYQLNLTIDYGQQTLRLCHSDLPPSPPGPRGVSLPLLFFEHFPAIRAYVTAPHTAELLLTLDTGSNSALTLSPDLAATLGLDVQTTPAATGHGFATTTPVVLGMAVDLQIGPFHLDSVAVDVPATHHGDLGRPGRANAGNRLLSRFRRVTLDYRRAVCILDE
>NC_011831.1|WP_012616155.1|1079229_1080669_+|deoxyribodipyrimidine-photo-lyase
MLIHWFRRDLRLRDNTALLAAADASGGAVIPVFIFDDAILGGRFASPARTQFLLDSLTALDGELRSLGLHLVLRRGEPLTTLMALLRESGAHGVTWNRDYTPYAVQRDSTIKRELRAAGYRAESYKDAVIFEMNEVVTAAGQPYTVYTPYAKRWRARLESEPVRVQGVPELTAIPLPASDPLPALNDLLPTAPTSVPRFATGETAARAALEHFIHNAIANYATARDLVAIAGTSRLSPYLRFGVLSPRQCVVAARAAPSGPGPESWIGELIWREFYIQVLYHFPHALRGSFKPVYDRIVWPNDPALFAAWQQGRTGYPIVDAAMRQLQQEGWMHNRARMIVASFLTKDLLIDWRWGERHFMHLLIDGDPAANNGGWQWAAGTGTDAQPYFRIFNPVSQGQKFDPDGAYVRRYVPELAGVPTRYIHEPHKMPPSEQVRAGVQIGRDYSAPVVDHATQRLRALELYRSATRADDAAAEQYA
>NC_011831.1|WP_012616153.1|1077808_1078861_-|Holliday-junction-branch-migration-DNA-helicase-RuvB
MSAERLVNPHSDSDDQQVEKSLRPRTLSEFIGQEKVVEQLRIAIAAARGRNEALDHTLFYGPPGLGKTSLANVVANEMGAKIKITSGPAIERAGDLAAILTNLQPNDVLFIDEVHRLNRAVEEVLYPAMEDFALDLVVGKGPGARSLRLNLPRFTVIGATTRLALLTSPLRDRFVAVHRLVFYSDAAMTEIVSRSARILGVPISPEGAREIGRRARGTPRIANRILRRVRDYAQVVANGEITLAVAREALAQLEIDELGLDENDRRLLRAIIELFNGGPVGLNTLAAALAEEVDAIEDVYEPFLLQLGFLQRTPRGRVATRRAYEHLGLPFPERSLPLEDESGPQQGTLF
>NC_011831.1|WP_012616152.1|1076986_1077805_-|glycosyltransferase-family-2-protein
MMRLSIAIIARDEAAHIAGCLRSIAGLSDDVVVIVDAQTRDETAAIAASHGAQVWIEPWRGFSAQRNLALQRCRGEWVLFIDADERLTPQLFIELATLVYRNPPDPIAGYRIPRYNLFFGRRLRGGGWYPDYQLRLLRRDAARYDERVSVHEVATLSGAVAELHGHLLHLNIERLDELWQKQARYAWAEATMLYRNGRRMRLRNLIGAPAREFIRRYLQLGGWRDGWLGLFLCATLAWYEVVKFCMLRGLQESDTAITTQMTRMRCKYARFR
>NC_011831.1|WP_012616151.1|1076026_1076977_-|homocysteine-S-methyltransferase
MNPIAQALTQRPLLVLDGALATELERRGCDLADPLWSAKVLIENPTLIQAVHADYFAAGADVAITASYQATIPGFMARGLSEAEAIALLQRSVALARAARDAFWADPANRVGRIRPLVAASIGPYGAYLHDGSEYRGEYGLSVADLIDFHRPRMAALAAAEPDLFACETIPCWDEARALVALLPEFPQLTAWISFSARDGAHTSRGEPITEVVAEIAAHPQVAAIGINCTAPRFIPDLIRAIRSVTTKPIVVYPNSGEVYDPVGQCWIGTTEIDDFAAQARQWYAVGARLIGGCCRTTPDHIRAVAAWAAREVQHG
>NC_011831.1|WP_012616150.1|1075101_1076034_-|DUF3445-domain-containing-protein
MVEAWPFDPFVIPTPNVLRVSAYPLHGAPVFHVDLAHYHYEVSLKLALLKTHLSYYVQAYPDSLSAQWELLEWGVGELARSYPQWFVMRRSGNEIYWENRLLGQTATIKLNGDLELWPIDWLGRQVQEDLLLMAVDELSGHPLIAGQLCFPNRWCIGDKMGLPLAAIHGPVPGFREQIAYSTNRLVARLLPQRPVWRRNWSLVVLPDLDLSPRLGSLDEQKAAITAENAGERVFYRVERQTLVRLNRHPSVLFTVHTYVAPLARLAVNPRWAATLAALLQQVEPNMLAYKGITPYLQPLLAYLHQSAERG
>NC_011831.1|WP_012616149.1|1074444_1075056_-|SH3-domain-containing-protein
MADEQGQRPTGSVQRDQPRQGGSSRTERLQATSTASKWRPSRQTGTPTINSANIWQILPRWLQQRGWIYLLILVVLLALFFVIVLWLLRGDRRNAPLGTQLPTAITLPTADAGSLPGNEANTTAQPAPTPAPRFFVVVNTGNQGLFLRPQPNRNDPPITTLPEGTRLEQIGDDVPGSDYVWRPVRTPDGLEGYVAVDFLAPEP
>NC_011831.1|WP_012616164.1|1099504_1100713_-|glycosyltransferase-family-4-protein
MRVLIIGLGGVSRTFRNWPERTLGQALVAAGHEVMALTYWQPDQPHLGLSERTETIDGIVVRRVKPELWPGHETVAALESMPLPDVAHVIHPRNVLALQAVRWLRRRGVPVVWTWLGPYHDRWLVADRERPYESAIHPERLIYTVPQLLKRGLRDWQWRDHWRNYAIHRPLRDVAAFIPCSQHEAQVLRELGFTQPMTVVPLWLDMAFMEGPAPPLTTTFTPPIIPYIGQLTPRKGYDVLVAAMPAIIARYQQASFVFVTHNPAQRAELQRLAGELGVAANIHFLGTLSEEQKLALLRASAVLPFPSRYEGFGLPVLEGMAAGVPVISTNIPVINELIRDGEDGLLIPYNDAKALAGAMLRVLDDQALRERLIAGGRRAVRERFAPERLVVQVIAAYQAVVG
>NC_011831.1|WP_012616165.1|1100758_1101889_-|glycosyltransferase-family-4-protein
MRIALYNLTTTTKIGGVESFVWDLARELVKRGHAVDILGGVGTRRETTGARVFTFPFISRRFWQALPPLRRAYAEAKLLERLTMAIAALPTLVRGNYQIIHLQKPYDLLPALLARRLSGAKVILGCHGEDFYRGDRWLARHVDAAVSCSRFNAQTIAGRYGFTPEVVFNGIDTSLFRPQPPDPTRRTRWGLPTDRPLLLFVGRLQPWKGVETAIRALSYIPHTHLIIAGDGEDRERLATIATELGLHERVTFLGSVPRQQLPDLYAAVDILVATSYASETFGIGPVEAQACGLPVVASRFGGFPEVVADGHTGLLVPPRDPPALAEAINTLLRDPDRRAAMAAAAPAWAAQFAWPAVVDRIEAVYRAVVGETVRAR
>NC_011831.1|WP_085953496.1|1101892_1104097_-|hypothetical-protein
MWIAVGHWWESLPTTYRVQLVRALAAYFTVILCVVGFNWLLANAGRPQTVAPASASRWLLAGLNRVEVSEWGDFRWTDGNSQVCVTDVGTAQRSLVTVRLSGAYARGLGVETVMLQAGVAEPIQVPLGADLRRYTLLTGADHQPGADVCVTIQSIAVRDPNNPRWLGVPFHGLSVLPLIAAGKVIPAPSGLLIGLALAVGWLALLHLSGVPLLLATGLVVAIGSLITYTLVGGLTPFGAGTLRWALPMVVGVWSGVIGLAVARRCPLRRPWLAELTVILFWSGALLSAFWLLQQISGHSGVWPLKSRIDPSPTWWVIVPIGCAILWFALGWRWLARPLQPVPVTIYTFIGALGLPVMFDIAVHGLDAPIALFRDSPYEYLRDTPYVAGDPIGFITNFETIAPMLSVHGSTHPPGAILFLWLIEQVFGPGPVATSWLTIGLTALMPLVAVWLGWRLGGGQLALAAGMVAVVMPGQMVYGVTSLDGVFSLLIAVGAAAFFLALEPPYRLWLAVVAGLSIAAALFMTYATTQLFFFGVAAAAFALARHRQIYGWRMTLLMIVRQGAVAAGVIGLIYLMIFLITGFNVISAARTATQINGEMMERFREYGPPPTPFLPPSYDYYLRFAAANLVSYLVFLTPWLLAVLSILYIRAIREHWRPAWAALLGSLGAFVLGMWLSGLFNREVERIWMFTYPLAAVITAYYLMNGTIDRRRFIVYVGLTLTFFVIIKLTLYTIW
>NC_011831.1|WP_012616167.1|1104162_1105818_-|hypothetical-protein
MTAQRPSLATQVSRAVLWNALFAPLRLLTEVIATLVKLNQLSQAGFGLLALVRGASNLFGTALDLGIARALPKYIPETERAGGMRAARQLFLLVATIQLAILLVITVGLALTHRQIEAYLQGLLGGEVTVEAAARAELSQFVAEFHWLIIAAIVILLGLGALYDLLMAVLSSFFRQKAWNSIALAAGLLPQVLVVVAILALPDLWDILGVLVAMVVAPAIAVALAGWQVWRLQAGIAHEPGSSVWADVRDGLRDLRQALPNGFVRYAAVSYLMTATDFIASFEFINFFNSDIRDVSLLAAGALLVRMALSYLYTPLVGVQVPLFTRVRQGEGGTTNGAYQSLVRLQLLLMIPGGVGLILLAAPGLLVISPQYLDAVPIVWVLTPCLFSESILTTAHNALMVNERLRVVIAARLIALLTVVTLAWWLPLQFGLIGMALTFGLARVAAGLWVTVAGMRLLGLRWPGRFTLRVSAAAAVMGVVVTGLRAFIVLPAGTVDLMSRLGIALQLVMLAGIGALVFLLTLRLLGGLDPADRAHVLKWRLPLQGVIRRLL
>NC_011831.1|WP_012616168.1|1105814_1106663_-|class-I-SAM-dependent-methyltransferase
MTTDIDHQLAAAIDPWLQHMTWRRDFAAWRERRLHQEQYQTERLAQVRAVAGDLRGLRLLDLGAGMGGFAVAAALAGAQVMACEYNPAYCQIIRLRAARYRLRLPIINAAGEGLPLLSAQFDVVVAWDVLEHVQDPIAVLREIARVLRPGGHALITAINRRAWIDPHYHMRGINWLPRPLAEALIELRGRTKRGAAFRDMQRLSTMHYFHYHELVQLCERLGFAVTDLRELALLAGQLPSRRPWRRAVRAILRRIGLERAAYRWQRRFYTGMFELDLRKEGA
>NC_011831.1|WP_012616169.1|1106858_1109246_-|hypothetical-protein
MASSLIKRINLRTVAVSQVHRLPGVTIPALWLAMITVVTLFAGYAVRPVVTVDIGDNRDGAFLVNFNGREIDAAGGYERFEWPAGASTVTVPGGRKGVWLARITARPDADPIILQRESAAVVNGVRLEMPRRSGTEMFVKIPAQIAAAPTLTFELVSPLVGGEAPPPGVPLAVELAPARTYRWSADESQIVFLRLGQGNWIVRLDAVVAHPDGSPVNARISANGVELARLLEQAQLRRIQILIPATLMNGGDLNLTLQADPFRDPRLLGVLVADVSVVPAASPVLTTIAPPPVALGFGLFTVLGMFACLALLTADVQRRWYLDATGWAAVGLTLAVAVAGWALVVYRFPSGQMIDRLAALTVLSLLITVVMRPLTRWLLRQTGAVVTAEFGAALLIVFLVGFWLKAIGMLYPYYVGIDVFWHMDKARRIIYDGALPLYYSVNSPLNETTMPVAEWGRNPPVIPYSPWFHILATGYAIFPWPMELTANVVSLLMDMSRVVLIAAIALKAGLSQRTALLAAITYAVLPVTYLLHIWGNVPTAAGLWLNLLVQTAILLAWDRLGEWKVQLWFVPLLVLAFLVYTVTGVFTGVFLVCLTVLIWLNGRRGPEWRALLPGLKPLWLTAGAAIGLAIAIYYGQYFQPIVERTIPYMMTVFTRGPETVGVSRPPFHEYLWSFVPHLGYHIWPNHYLYYGLAIPLIFFIPGYWMMRTKPLLWLVVSAWGTVALLFLIAGYRISMVDKQLFYLIPVICLAWAIMADRLWERWAGRLFVLATLALSLGSALWLWVYRISISPVQGN
>NC_011831.1|WP_012616170.1|1109351_1112516_+|hypothetical-protein
MTQIIIGTLLLPLIIYAPGWALTRVIPELETNDGLERHFERCLIGALWSGWLALVLASFGIFSIWLHLGITLAVSAGLIWLGQRHSPPRTAVPRTAVRGYAVTLLVLALLVARPFEVILGVRDAGVYAVTGFAIARTGSIVQTDAVVAELGQAAQSSDPAVREPAEQAISNLMIGQARDRYIATRLRAAGFLINEGELAQGRIVPQGFHLFPAWIGLLTAAGGPLFGLFATGLLGLLGVWSVGMIGRRLAGPWVGWLGMVLLGLNAVQVWFSRYSTAETTAQFLTWGGLYLFAKFNDHGLPARARIAYAALAGIAFGQVALARIDFFLLAPAILYLGYCWLTRRWQHVQTALALGMLVMLVHAALHIIFIARAYFFDTGFARFQDFALTSLIALPFLTPAVRESYFTSKFSSLGDPGRIWIELALIGLIIVALIMIRRSGRLLHIERQMVSRRQSWQNAIALGLVLLAGWAYFVRPQIIDADLLFNTRGGWNDPLTRDPNLVAGDVRSGVMTPTEARLQAGVVLTGRPWEAEPDLAATEALRTELAATRGPWQGPFSNQTLNWLRIQGYVGAPIRLPLVLYYQEYNGMSWWQRMLADPSTFTSEPAPVQPKELIPLAGLVRVGWYLSPLGVVLAVIGFALWWRRGLSAASWLMLTVGFLGSFFYLRQTYGTSEQTYIYILRRFVPIAYPIFALSAAYALAALAGAWQFRPHAARWRQGLAAALAGLLILFLGWTGRYYFVHTEYAGALAQVEAIAKHFTPDRDIVLLRGGAPIYSDARDIPDLLATPLRFAYDINAFTVKSVSTAPYATLLAEQVKRWQAAGRTVYLMLSASGGNLALPGFHLTFITEVALDLAEFEQLTDQKPQNVSRLTLPFAIYRLDPVESPVVDTAPPPLTPTSFAAQVSGFYRPEQSKDGWQYSWSNGEAVLRLPWPADAVQQTVAIEVAGGLRPDHLGPATLCIAAQREDTLWPTTSSPLVELGCHQIGQEPTLVRVTLDPTQLPPTTSGALLLHLSGPAWIPANEDPRLTDRRVLHVQIGHIWIHHPSAHGTPSPTL
>NC_011831.1|WP_157044826.1|1112536_1112857_-|hypothetical-protein
MGRRVGDGIAVRRRVVLWGWGDGIVGARQRRALTAWGDGIAVRRRVGDGIAVRRRVVLWGWGDGIVGARQRRALTAWGDGIAVRRRVGDGVPWADGWCCGGGGTVL
>NC_011831.1|WP_012616172.1|1113991_1114837_+|hypothetical-protein
MLIGADIDQLNATIAAFRRGSTELNDALQRSLRAIQSMQNSQWSGQHRQQAEAIWERIQVQLASTINDLENLTARTERFANNLMEAGQRFGDSANISQGNTINQGITPNQGITQPDGSTSEVKPAPDSIGQNPQQDVPSTPVYLRDGVSPQQFSTVDGCVRYAQTRRPDLGIAPGEGGAADYIHAPHLKDKIFQLTTGSERIDRGYAIVWDRAFYQSDIGRKYGHVAIVEGTVVENGEEYVVVSQAGVGHNLGPTTYPERSMNEKIPKKVLLNEHIYIVGP
>NC_011831.1|WP_012616174.1|1115690_1117010_-|ATP-binding-cassette-domain-containing-protein
MQQAQPKPLVELMGVSQRYGRGERQFTAIQDINLTIAEGEFVALLGPSGCGKSTLLRIITGLNRPSEGLVRYRGKMLTGVNPFATIVFQTFALFPWLTVEENVAVALIARGVDEAEAHRRAVELIDLVGLDGFEQAYPRELSGGMRQKVGIARALAVDPELLCLDEPFSALDVLSAETLRGEVLELWTGGNLKIRAVLMVSHNIEEAVFMADRIVVMDKNPGRIIAEVPVQLPHPRDRKSDAFAALVARVYAVLAGQTQPEAIEYGTEPGQNGQTRLLPQASVTALAGLLEQANATDLERDPIAQLQDELGLDLDQLLPLIEAAELLGFARVESGNLILTPLGEAFAEASIQARKEIFASRLRRLPFFRWMLRMIIAADNQSLRWEVLRTALEPEFPAEVAERQLDVALEWGRYAELFAYDDAEGRFFLETPTTVGGER

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Crispr_ID: NC_011831_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_5

1096120-1096212

Orphan

Consensus_repeat	Method
TCAAGCCATCGCCGTCGGTATCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_5

>merge|NC_011831|5|1096120-1096212|CRISPRCasFinder
GGATGTTATCGCCATCGGTATCACGCGCTTGCAGCACATTCCCGTTACGAACTACTTCCAGACTATCGAGTACACCATCGCGGTTGGTATCTT

>NC_011831|5|4|1096120-1096212|CRISPRCasFinder
GGATGTTATCGCCATCGGTATCA	CGCGCTTGCAGCACATTCCCGTTACGAACTACTTCCAGACTATCGA
GTACACCATCGCGGTTGGTATCTT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012616164.1\|1099504_1100713_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NC_011831.1\|WP_012616168.1\|1105814_1106663_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NC_011831.1\|WP_012616155.1\|1079229_1080669_+\|deoxyribodipyrimidine-photo-lyase	unknown	unknown	gnl\|CDD\|223492
NC_011831.1\|WP_085953496.1\|1101892_1104097_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616174.1\|1115690_1117010_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213260
NC_011831.1\|WP_012616170.1\|1109351_1112516_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224206
NC_011831.1\|WP_012616153.1\|1077808_1078861_-\|Holliday-junction-branch-migration-DNA-helicase-RuvB	unknown	unknown	gnl\|CDD\|234619
NC_011831.1\|WP_012616165.1\|1100758_1101889_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NC_011831.1\|WP_012616150.1\|1075101_1076034_-\|DUF3445-domain-containing-protein	unknown	unknown	gnl\|CDD\|378763
NC_011831.1\|WP_012616167.1\|1104162_1105818_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240532
NC_011831.1\|WP_012616158.1\|1083488_1083863_+\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|225876
NC_011831.1\|WP_012616156.1\|1080661_1081510_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379313
NC_011831.1\|WP_012616159.1\|1083977_1084877_-\|peptidase-T	unknown	unknown	gnl\|CDD\|271338
NC_011831.1\|WP_012616169.1\|1106858_1109246_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616157.1\|1081757_1083455_+\|peptidase	unknown	unknown	gnl\|CDD\|366791
NC_011831.1\|WP_012616172.1\|1113991_1114837_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377587
NC_011831.1\|WP_012616151.1\|1076026_1076977_-\|homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|181899
NC_011831.1\|WP_012616149.1\|1074444_1075056_-\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|377965
NC_011831.1\|WP_012616152.1\|1076986_1077805_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NC_011831.1\|WP_157044826.1\|1112536_1112857_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012616164.1\|1099504_1100713_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	8.48578e-56
NC_011831.1\|WP_012616168.1\|1105814_1106663_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.47317e-20
NC_011831.1\|WP_012616155.1\|1079229_1080669_+\|deoxyribodipyrimidine-photo-lyase	gnl\|CDD\|223492	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair].	0
NC_011831.1\|WP_012616174.1\|1115690_1117010_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.04585e-109
NC_011831.1\|WP_012616170.1\|1109351_1112516_+\|hypothetical-protein	gnl\|CDD\|224206	COG1287, COG1287, Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only].	6.49141e-05
NC_011831.1\|WP_012616153.1\|1077808_1078861_-\|Holliday-junction-branch-migration-DNA-helicase-RuvB	gnl\|CDD\|234619	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB.	0
NC_011831.1\|WP_012616165.1\|1100758_1101889_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.1241e-74
NC_011831.1\|WP_012616150.1\|1075101_1076034_-\|DUF3445-domain-containing-protein	gnl\|CDD\|378763	pfam11927, DUF3445, Protein of unknown function (DUF3445). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 264 to 418 amino acids in length. This protein has a conserved RLP sequence motif. This protein has two completely conserved R residues that may be functionally important.	4.53303e-73
NC_011831.1\|WP_012616167.1\|1104162_1105818_-\|hypothetical-protein	gnl\|CDD\|240532	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. This family might function as a translocase for lipopolysaccharides and participate in the biosynthesis of cell wall components such as teichuronic acid. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	7.90591e-07
NC_011831.1\|WP_012616158.1\|1083488_1083863_+\|DUF1232-domain-containing-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	9.07475e-17
NC_011831.1\|WP_012616156.1\|1080661_1081510_+\|hypothetical-protein	gnl\|CDD\|379313	pfam13650, Asp_protease_2, Aspartyl protease. This family consists of predicted aspartic proteases, typically from 180 to 230 amino acids in length, in MEROPS clan AA. This model describes the well-conserved 121-residue C-terminal region. The poorly conserved, variable length N-terminal region usually contains a predicted transmembrane helix.	1.553e-07
NC_011831.1\|WP_012616159.1\|1083977_1084877_-\|peptidase-T	gnl\|CDD\|271338	cd04702, ASRGL1_like, Metazoan L-Asparaginase type 2. ASRGL1 and similar proteins constitute a subfamily of the L-Asparaginase type 2-like enzymes. The wider family includes Glycosylasparaginase, Taspase 1, and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue. ASRGL1, or asparaginase-like 1, has been cloned from mammalian testis cDNA libraries. It has been identified as a sperm antigen that may induce the production of autoantibodies following obstruction of the male reproductive tract, e.g. vasectomy.	3.38897e-113
NC_011831.1\|WP_012616157.1\|1081757_1083455_+\|peptidase	gnl\|CDD\|366791	pfam01752, Peptidase_M9, Collagenase. This family of enzymes break down collagens.	0.000120848
NC_011831.1\|WP_012616172.1\|1113991_1114837_+\|hypothetical-protein	gnl\|CDD\|377587	pfam06013, WXG100, Proteins of 100 residues with WXG. ESAT-6 is a small protein appears to be of fundamental importance in virulence and protective immunity in Mycobacterium tuberculosis. homologs have been detected in other Gram-positive bacterial species. It may represent a novel secretion system potentially driven by the pfam01580 domains in the YukA-like proteins.	1.35778e-06
NC_011831.1\|WP_012616151.1\|1076026_1076977_-\|homocysteine-S-methyltransferase	gnl\|CDD\|181899	PRK09485, mmuM, homocysteine methyltransferase; Provisional.	0
NC_011831.1\|WP_012616149.1\|1074444_1075056_-\|SH3-domain-containing-protein	gnl\|CDD\|377965	pfam08239, SH3_3, Bacterial SH3 domain.	1.81394e-06
NC_011831.1\|WP_012616152.1\|1076986_1077805_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	6.37608e-70

>NC_011831.1|WP_012616159.1|1083977_1084877_-|peptidase-T
MTTESLIALIVHGGAWAIPDDQVAAHIAGCEAARAAGWQCLQRGGSALDAVEAAVRVMEDDPIFDAGTGSVLNSAGMVELDAAVMDGRTLRYGAVAGVRQIRNPITLARHVLTGPATMLVGPGAEVFAVSVGMTLCTNEELIVERERRLWLEWQARGAPPPSATDAHDTVGAIALDRAGNLVAANSTGGTPFKLPGRVGDTPLIGCGLYATPVGAAVCTGWGESITRVALARRVVELLEAGIAPQEAAERGIRLLGELVPDGRGGVIVLTADGSVGLAWNTPRMAHAYIDGRGVAHSGV
>NC_011831.1|WP_012616158.1|1083488_1083863_+|DUF1232-domain-containing-protein
MLTTLKRHAHTLKREAYTLYIALRDPRVPWYTKVLLALVVAHTFSPIDLIPDFIPVLGYLDDLILTPLGIWLALKLIPPEVIHAARQQATTLDEQGKPVSRIGAMMVIGIWLIGLIGLLWWWFS
>NC_011831.1|WP_012616157.1|1081757_1083455_+|peptidase
MRYLIVGFVVLILLIPSGSRLPLAVTPAYPPPIRLPACPQPTVADVDAMLALLPQAGYDCTEQIAVALRPRIEPVYVQELLAIAVEPTFDTRTRRNALRILGRLAESGPVTRARELMVQQQSMVQMTALTLLERERDNFLLQDAVWLLDSHYYPSWVAAPALEQIALGGEYAPALRYRAARARARLIAAEYGPLRDDSQRFIVAALRSADPGVRTAAAEAISFLRDDQLTARTDWLQLVEEALVHEPPLHVATDSGDPRGAALLTFLESTPTTLTARAALARAADRLAGETATVPRLNALRIAYEHLALPLQHESATVVLRTGPAETSDGDELLAIVATTYAQARRFLGSVGETPIPGEEHLPLQVLIFPGQAAYRDYMRAFTPFTVDVDGIYDVQQNTLYSYRRRDDQTANTLAETLRHEVAHAVTAAYLFPGQWHTPGYHAEPKGWFDEGFAEVLAAQTKPDAPLQPHPRHLATICAQPLKPALADLVALRTGYDQYGTFDYPAAWALMHFLLAERPAAAAALISAWRNQTYHLANWPTLGGWSDWTSAESDWHFAIERWCRL
>NC_011831.1|WP_012616156.1|1080661_1081510_+|hypothetical-protein
MLDDRTELHFPANGMTEVPLLWQPQVVRCHAAGPGGRPLHVLIDTGTDPSAIDLTLARRLDLRIGDFALGSDAASDAVPFTETMLPWLRIGTLTLRHLYLMAVDLSHAPFPVDVVLGYNVLYQLNLTIDYGQQTLRLCHSDLPPSPPGPRGVSLPLLFFEHFPAIRAYVTAPHTAELLLTLDTGSNSALTLSPDLAATLGLDVQTTPAATGHGFATTTPVVLGMAVDLQIGPFHLDSVAVDVPATHHGDLGRPGRANAGNRLLSRFRRVTLDYRRAVCILDE
>NC_011831.1|WP_012616155.1|1079229_1080669_+|deoxyribodipyrimidine-photo-lyase
MLIHWFRRDLRLRDNTALLAAADASGGAVIPVFIFDDAILGGRFASPARTQFLLDSLTALDGELRSLGLHLVLRRGEPLTTLMALLRESGAHGVTWNRDYTPYAVQRDSTIKRELRAAGYRAESYKDAVIFEMNEVVTAAGQPYTVYTPYAKRWRARLESEPVRVQGVPELTAIPLPASDPLPALNDLLPTAPTSVPRFATGETAARAALEHFIHNAIANYATARDLVAIAGTSRLSPYLRFGVLSPRQCVVAARAAPSGPGPESWIGELIWREFYIQVLYHFPHALRGSFKPVYDRIVWPNDPALFAAWQQGRTGYPIVDAAMRQLQQEGWMHNRARMIVASFLTKDLLIDWRWGERHFMHLLIDGDPAANNGGWQWAAGTGTDAQPYFRIFNPVSQGQKFDPDGAYVRRYVPELAGVPTRYIHEPHKMPPSEQVRAGVQIGRDYSAPVVDHATQRLRALELYRSATRADDAAAEQYA
>NC_011831.1|WP_012616153.1|1077808_1078861_-|Holliday-junction-branch-migration-DNA-helicase-RuvB
MSAERLVNPHSDSDDQQVEKSLRPRTLSEFIGQEKVVEQLRIAIAAARGRNEALDHTLFYGPPGLGKTSLANVVANEMGAKIKITSGPAIERAGDLAAILTNLQPNDVLFIDEVHRLNRAVEEVLYPAMEDFALDLVVGKGPGARSLRLNLPRFTVIGATTRLALLTSPLRDRFVAVHRLVFYSDAAMTEIVSRSARILGVPISPEGAREIGRRARGTPRIANRILRRVRDYAQVVANGEITLAVAREALAQLEIDELGLDENDRRLLRAIIELFNGGPVGLNTLAAALAEEVDAIEDVYEPFLLQLGFLQRTPRGRVATRRAYEHLGLPFPERSLPLEDESGPQQGTLF
>NC_011831.1|WP_012616152.1|1076986_1077805_-|glycosyltransferase-family-2-protein
MMRLSIAIIARDEAAHIAGCLRSIAGLSDDVVVIVDAQTRDETAAIAASHGAQVWIEPWRGFSAQRNLALQRCRGEWVLFIDADERLTPQLFIELATLVYRNPPDPIAGYRIPRYNLFFGRRLRGGGWYPDYQLRLLRRDAARYDERVSVHEVATLSGAVAELHGHLLHLNIERLDELWQKQARYAWAEATMLYRNGRRMRLRNLIGAPAREFIRRYLQLGGWRDGWLGLFLCATLAWYEVVKFCMLRGLQESDTAITTQMTRMRCKYARFR
>NC_011831.1|WP_012616151.1|1076026_1076977_-|homocysteine-S-methyltransferase
MNPIAQALTQRPLLVLDGALATELERRGCDLADPLWSAKVLIENPTLIQAVHADYFAAGADVAITASYQATIPGFMARGLSEAEAIALLQRSVALARAARDAFWADPANRVGRIRPLVAASIGPYGAYLHDGSEYRGEYGLSVADLIDFHRPRMAALAAAEPDLFACETIPCWDEARALVALLPEFPQLTAWISFSARDGAHTSRGEPITEVVAEIAAHPQVAAIGINCTAPRFIPDLIRAIRSVTTKPIVVYPNSGEVYDPVGQCWIGTTEIDDFAAQARQWYAVGARLIGGCCRTTPDHIRAVAAWAAREVQHG
>NC_011831.1|WP_012616150.1|1075101_1076034_-|DUF3445-domain-containing-protein
MVEAWPFDPFVIPTPNVLRVSAYPLHGAPVFHVDLAHYHYEVSLKLALLKTHLSYYVQAYPDSLSAQWELLEWGVGELARSYPQWFVMRRSGNEIYWENRLLGQTATIKLNGDLELWPIDWLGRQVQEDLLLMAVDELSGHPLIAGQLCFPNRWCIGDKMGLPLAAIHGPVPGFREQIAYSTNRLVARLLPQRPVWRRNWSLVVLPDLDLSPRLGSLDEQKAAITAENAGERVFYRVERQTLVRLNRHPSVLFTVHTYVAPLARLAVNPRWAATLAALLQQVEPNMLAYKGITPYLQPLLAYLHQSAERG
>NC_011831.1|WP_012616149.1|1074444_1075056_-|SH3-domain-containing-protein
MADEQGQRPTGSVQRDQPRQGGSSRTERLQATSTASKWRPSRQTGTPTINSANIWQILPRWLQQRGWIYLLILVVLLALFFVIVLWLLRGDRRNAPLGTQLPTAITLPTADAGSLPGNEANTTAQPAPTPAPRFFVVVNTGNQGLFLRPQPNRNDPPITTLPEGTRLEQIGDDVPGSDYVWRPVRTPDGLEGYVAVDFLAPEP
>NC_011831.1|WP_012616164.1|1099504_1100713_-|glycosyltransferase-family-4-protein
MRVLIIGLGGVSRTFRNWPERTLGQALVAAGHEVMALTYWQPDQPHLGLSERTETIDGIVVRRVKPELWPGHETVAALESMPLPDVAHVIHPRNVLALQAVRWLRRRGVPVVWTWLGPYHDRWLVADRERPYESAIHPERLIYTVPQLLKRGLRDWQWRDHWRNYAIHRPLRDVAAFIPCSQHEAQVLRELGFTQPMTVVPLWLDMAFMEGPAPPLTTTFTPPIIPYIGQLTPRKGYDVLVAAMPAIIARYQQASFVFVTHNPAQRAELQRLAGELGVAANIHFLGTLSEEQKLALLRASAVLPFPSRYEGFGLPVLEGMAAGVPVISTNIPVINELIRDGEDGLLIPYNDAKALAGAMLRVLDDQALRERLIAGGRRAVRERFAPERLVVQVIAAYQAVVG
>NC_011831.1|WP_012616165.1|1100758_1101889_-|glycosyltransferase-family-4-protein
MRIALYNLTTTTKIGGVESFVWDLARELVKRGHAVDILGGVGTRRETTGARVFTFPFISRRFWQALPPLRRAYAEAKLLERLTMAIAALPTLVRGNYQIIHLQKPYDLLPALLARRLSGAKVILGCHGEDFYRGDRWLARHVDAAVSCSRFNAQTIAGRYGFTPEVVFNGIDTSLFRPQPPDPTRRTRWGLPTDRPLLLFVGRLQPWKGVETAIRALSYIPHTHLIIAGDGEDRERLATIATELGLHERVTFLGSVPRQQLPDLYAAVDILVATSYASETFGIGPVEAQACGLPVVASRFGGFPEVVADGHTGLLVPPRDPPALAEAINTLLRDPDRRAAMAAAAPAWAAQFAWPAVVDRIEAVYRAVVGETVRAR
>NC_011831.1|WP_085953496.1|1101892_1104097_-|hypothetical-protein
MWIAVGHWWESLPTTYRVQLVRALAAYFTVILCVVGFNWLLANAGRPQTVAPASASRWLLAGLNRVEVSEWGDFRWTDGNSQVCVTDVGTAQRSLVTVRLSGAYARGLGVETVMLQAGVAEPIQVPLGADLRRYTLLTGADHQPGADVCVTIQSIAVRDPNNPRWLGVPFHGLSVLPLIAAGKVIPAPSGLLIGLALAVGWLALLHLSGVPLLLATGLVVAIGSLITYTLVGGLTPFGAGTLRWALPMVVGVWSGVIGLAVARRCPLRRPWLAELTVILFWSGALLSAFWLLQQISGHSGVWPLKSRIDPSPTWWVIVPIGCAILWFALGWRWLARPLQPVPVTIYTFIGALGLPVMFDIAVHGLDAPIALFRDSPYEYLRDTPYVAGDPIGFITNFETIAPMLSVHGSTHPPGAILFLWLIEQVFGPGPVATSWLTIGLTALMPLVAVWLGWRLGGGQLALAAGMVAVVMPGQMVYGVTSLDGVFSLLIAVGAAAFFLALEPPYRLWLAVVAGLSIAAALFMTYATTQLFFFGVAAAAFALARHRQIYGWRMTLLMIVRQGAVAAGVIGLIYLMIFLITGFNVISAARTATQINGEMMERFREYGPPPTPFLPPSYDYYLRFAAANLVSYLVFLTPWLLAVLSILYIRAIREHWRPAWAALLGSLGAFVLGMWLSGLFNREVERIWMFTYPLAAVITAYYLMNGTIDRRRFIVYVGLTLTFFVIIKLTLYTIW
>NC_011831.1|WP_012616167.1|1104162_1105818_-|hypothetical-protein
MTAQRPSLATQVSRAVLWNALFAPLRLLTEVIATLVKLNQLSQAGFGLLALVRGASNLFGTALDLGIARALPKYIPETERAGGMRAARQLFLLVATIQLAILLVITVGLALTHRQIEAYLQGLLGGEVTVEAAARAELSQFVAEFHWLIIAAIVILLGLGALYDLLMAVLSSFFRQKAWNSIALAAGLLPQVLVVVAILALPDLWDILGVLVAMVVAPAIAVALAGWQVWRLQAGIAHEPGSSVWADVRDGLRDLRQALPNGFVRYAAVSYLMTATDFIASFEFINFFNSDIRDVSLLAAGALLVRMALSYLYTPLVGVQVPLFTRVRQGEGGTTNGAYQSLVRLQLLLMIPGGVGLILLAAPGLLVISPQYLDAVPIVWVLTPCLFSESILTTAHNALMVNERLRVVIAARLIALLTVVTLAWWLPLQFGLIGMALTFGLARVAAGLWVTVAGMRLLGLRWPGRFTLRVSAAAAVMGVVVTGLRAFIVLPAGTVDLMSRLGIALQLVMLAGIGALVFLLTLRLLGGLDPADRAHVLKWRLPLQGVIRRLL
>NC_011831.1|WP_012616168.1|1105814_1106663_-|class-I-SAM-dependent-methyltransferase
MTTDIDHQLAAAIDPWLQHMTWRRDFAAWRERRLHQEQYQTERLAQVRAVAGDLRGLRLLDLGAGMGGFAVAAALAGAQVMACEYNPAYCQIIRLRAARYRLRLPIINAAGEGLPLLSAQFDVVVAWDVLEHVQDPIAVLREIARVLRPGGHALITAINRRAWIDPHYHMRGINWLPRPLAEALIELRGRTKRGAAFRDMQRLSTMHYFHYHELVQLCERLGFAVTDLRELALLAGQLPSRRPWRRAVRAILRRIGLERAAYRWQRRFYTGMFELDLRKEGA
>NC_011831.1|WP_012616169.1|1106858_1109246_-|hypothetical-protein
MASSLIKRINLRTVAVSQVHRLPGVTIPALWLAMITVVTLFAGYAVRPVVTVDIGDNRDGAFLVNFNGREIDAAGGYERFEWPAGASTVTVPGGRKGVWLARITARPDADPIILQRESAAVVNGVRLEMPRRSGTEMFVKIPAQIAAAPTLTFELVSPLVGGEAPPPGVPLAVELAPARTYRWSADESQIVFLRLGQGNWIVRLDAVVAHPDGSPVNARISANGVELARLLEQAQLRRIQILIPATLMNGGDLNLTLQADPFRDPRLLGVLVADVSVVPAASPVLTTIAPPPVALGFGLFTVLGMFACLALLTADVQRRWYLDATGWAAVGLTLAVAVAGWALVVYRFPSGQMIDRLAALTVLSLLITVVMRPLTRWLLRQTGAVVTAEFGAALLIVFLVGFWLKAIGMLYPYYVGIDVFWHMDKARRIIYDGALPLYYSVNSPLNETTMPVAEWGRNPPVIPYSPWFHILATGYAIFPWPMELTANVVSLLMDMSRVVLIAAIALKAGLSQRTALLAAITYAVLPVTYLLHIWGNVPTAAGLWLNLLVQTAILLAWDRLGEWKVQLWFVPLLVLAFLVYTVTGVFTGVFLVCLTVLIWLNGRRGPEWRALLPGLKPLWLTAGAAIGLAIAIYYGQYFQPIVERTIPYMMTVFTRGPETVGVSRPPFHEYLWSFVPHLGYHIWPNHYLYYGLAIPLIFFIPGYWMMRTKPLLWLVVSAWGTVALLFLIAGYRISMVDKQLFYLIPVICLAWAIMADRLWERWAGRLFVLATLALSLGSALWLWVYRISISPVQGN
>NC_011831.1|WP_012616170.1|1109351_1112516_+|hypothetical-protein
MTQIIIGTLLLPLIIYAPGWALTRVIPELETNDGLERHFERCLIGALWSGWLALVLASFGIFSIWLHLGITLAVSAGLIWLGQRHSPPRTAVPRTAVRGYAVTLLVLALLVARPFEVILGVRDAGVYAVTGFAIARTGSIVQTDAVVAELGQAAQSSDPAVREPAEQAISNLMIGQARDRYIATRLRAAGFLINEGELAQGRIVPQGFHLFPAWIGLLTAAGGPLFGLFATGLLGLLGVWSVGMIGRRLAGPWVGWLGMVLLGLNAVQVWFSRYSTAETTAQFLTWGGLYLFAKFNDHGLPARARIAYAALAGIAFGQVALARIDFFLLAPAILYLGYCWLTRRWQHVQTALALGMLVMLVHAALHIIFIARAYFFDTGFARFQDFALTSLIALPFLTPAVRESYFTSKFSSLGDPGRIWIELALIGLIIVALIMIRRSGRLLHIERQMVSRRQSWQNAIALGLVLLAGWAYFVRPQIIDADLLFNTRGGWNDPLTRDPNLVAGDVRSGVMTPTEARLQAGVVLTGRPWEAEPDLAATEALRTELAATRGPWQGPFSNQTLNWLRIQGYVGAPIRLPLVLYYQEYNGMSWWQRMLADPSTFTSEPAPVQPKELIPLAGLVRVGWYLSPLGVVLAVIGFALWWRRGLSAASWLMLTVGFLGSFFYLRQTYGTSEQTYIYILRRFVPIAYPIFALSAAYALAALAGAWQFRPHAARWRQGLAAALAGLLILFLGWTGRYYFVHTEYAGALAQVEAIAKHFTPDRDIVLLRGGAPIYSDARDIPDLLATPLRFAYDINAFTVKSVSTAPYATLLAEQVKRWQAAGRTVYLMLSASGGNLALPGFHLTFITEVALDLAEFEQLTDQKPQNVSRLTLPFAIYRLDPVESPVVDTAPPPLTPTSFAAQVSGFYRPEQSKDGWQYSWSNGEAVLRLPWPADAVQQTVAIEVAGGLRPDHLGPATLCIAAQREDTLWPTTSSPLVELGCHQIGQEPTLVRVTLDPTQLPPTTSGALLLHLSGPAWIPANEDPRLTDRRVLHVQIGHIWIHHPSAHGTPSPTL
>NC_011831.1|WP_157044826.1|1112536_1112857_-|hypothetical-protein
MGRRVGDGIAVRRRVVLWGWGDGIVGARQRRALTAWGDGIAVRRRVGDGIAVRRRVVLWGWGDGIVGARQRRALTAWGDGIAVRRRVGDGVPWADGWCCGGGGTVL
>NC_011831.1|WP_012616172.1|1113991_1114837_+|hypothetical-protein
MLIGADIDQLNATIAAFRRGSTELNDALQRSLRAIQSMQNSQWSGQHRQQAEAIWERIQVQLASTINDLENLTARTERFANNLMEAGQRFGDSANISQGNTINQGITPNQGITQPDGSTSEVKPAPDSIGQNPQQDVPSTPVYLRDGVSPQQFSTVDGCVRYAQTRRPDLGIAPGEGGAADYIHAPHLKDKIFQLTTGSERIDRGYAIVWDRAFYQSDIGRKYGHVAIVEGTVVENGEEYVVVSQAGVGHNLGPTTYPERSMNEKIPKKVLLNEHIYIVGP
>NC_011831.1|WP_012616174.1|1115690_1117010_-|ATP-binding-cassette-domain-containing-protein
MQQAQPKPLVELMGVSQRYGRGERQFTAIQDINLTIAEGEFVALLGPSGCGKSTLLRIITGLNRPSEGLVRYRGKMLTGVNPFATIVFQTFALFPWLTVEENVAVALIARGVDEAEAHRRAVELIDLVGLDGFEQAYPRELSGGMRQKVGIARALAVDPELLCLDEPFSALDVLSAETLRGEVLELWTGGNLKIRAVLMVSHNIEEAVFMADRIVVMDKNPGRIIAEVPVQLPHPRDRKSDAFAALVARVYAVLAGQTQPEAIEYGTEPGQNGQTRLLPQASVTALAGLLEQANATDLERDPIAQLQDELGLDLDQLLPLIEAAELLGFARVESGNLILTPLGEAFAEASIQARKEIFASRLRRLPFFRWMLRMIIAADNQSLRWEVLRTALEPEFPAEVAERQLDVALEWGRYAELFAYDDAEGRFFLETPTTVGGER

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Crispr_ID: NC_011831_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_7

1241044-1241129

Orphan

Consensus_repeat	Method
TCTCCCACTGGTGCGGGAGAGGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_7

>merge|NC_011831|7|1241044-1241129|CRISPRCasFinder
TCTCCCACTGGTGCGGGAGAGGGGCTGACTGCCTGCATTACTGCCAGTTTCCGCATCACCTTCTCCAACTGGTGCGGGAGAGGGGC

>NC_011831|7|6|1241044-1241129|CRISPRCasFinder
TCTCCCACTGGTGCGGGAGAGGGGC	TGACTGCCTGCATTACTGCCAGTTTCCGCATCACCT
TCTCCAACTGGTGCGGGAGAGGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012616284.1\|1237512_1240242_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378373
NC_011831.1\|WP_041470368.1\|1226260_1227397_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616290.1\|1248876_1249785_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|372650
NC_011831.1\|WP_012616297.1\|1256290_1257352_+\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|181856
NC_011831.1\|WP_012616277.1\|1227479_1228604_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|341130
NC_011831.1\|WP_012616289.1\|1247026_1248850_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NC_011831.1\|WP_012616279.1\|1229648_1230815_-\|sodium-ion-translocating-decarboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|377182
NC_011831.1\|WP_012616275.1\|1224974_1226147_-\|response-regulator	unknown	unknown	gnl\|CDD\|333815
NC_011831.1\|WP_012616294.1\|1252742_1253540_+\|slipin-family-protein	unknown	unknown	gnl\|CDD\|259808
NC_011831.1\|WP_012616295.1\|1253636_1254530_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NC_011831.1\|WP_085953499.1\|1251291_1252671_+\|nodulation-protein-NfeD	unknown	unknown	gnl\|CDD\|223961
NC_011831.1\|WP_012616281.1\|1231274_1231634_-\|OadG-family-protein	unknown	unknown	gnl\|CDD\|377277
NC_011831.1\|WP_012616283.1\|1234748_1237493_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378373
NC_011831.1\|WP_012616280.1\|1230814_1231210_-\|biotin/lipoyl-binding-protein	unknown	unknown	gnl\|CDD\|236449
NC_011831.1\|WP_085953537.1\|1250991_1251183_+\|DUF951-domain-containing-protein	unknown	unknown	gnl\|CDD\|377606
NC_011831.1\|WP_012616282.1\|1231661_1233245_-\|methylmalonyl-CoA-carboxyltransferase	unknown	unknown	gnl\|CDD\|130187
NC_011831.1\|WP_012616296.1\|1254658_1256107_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NC_011831.1\|WP_012616291.1\|1249781_1251008_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NC_011831.1\|WP_012616288.1\|1244184_1245123_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|226229
NC_011831.1\|WP_012616278.1\|1228756_1229662_+\|NADH:flavin-oxidoreductase	unknown	unknown	gnl\|CDD\|239201

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012616284.1\|1237512_1240242_+\|hypothetical-protein	gnl\|CDD\|378373	pfam10060, DUF2298, Uncharacterized membrane protein (DUF2298). This domain, found in various hypothetical bacterial proteins, has no known function.	3.05059e-06
NC_011831.1\|WP_012616290.1\|1248876_1249785_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|372650	pfam13616, Rotamase_3, PPIC-type PPIASE domain. Rotamases increase the rate of protein folding by catalyzing the interconversion of cis-proline and trans-proline.	3.63593e-32
NC_011831.1\|WP_012616297.1\|1256290_1257352_+\|homoserine-dehydrogenase	gnl\|CDD\|181856	PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional.	1.07279e-102
NC_011831.1\|WP_012616277.1\|1227479_1228604_-\|L,D-transpeptidase	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	1.77444e-33
NC_011831.1\|WP_012616289.1\|1247026_1248850_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_011831.1\|WP_012616279.1\|1229648_1230815_-\|sodium-ion-translocating-decarboxylase-subunit-beta	gnl\|CDD\|377182	pfam03977, OAD_beta, Na+-transporting oxaloacetate decarboxylase beta subunit. Members of this family are integral membrane proteins. The decarboxylation reactions they catalyze are coupled to the vectorial transport of Na+ across the cytoplasmic membrane, thereby creating a sodium ion motive force that is used for ATP synthesis.	0
NC_011831.1\|WP_012616275.1\|1224974_1226147_-\|response-regulator	gnl\|CDD\|333815	pfam00072, Response_reg, Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.	6.33421e-08
NC_011831.1\|WP_012616294.1\|1252742_1253540_+\|slipin-family-protein	gnl\|CDD\|259808	cd08826, SPFH_eoslipins_u1, Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes a subgroup of the stomatin-like protein family (SLPs or slipins) that is found in bacteria and archaebacteria. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Bacterial and archaebacterial SLPs remain uncharacterized. This subgroup contains PH1511 from the hyperthermophilic archaeon Pyrococcus horikoshi.	9.46801e-111
NC_011831.1\|WP_012616295.1\|1253636_1254530_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	9.63349e-22
NC_011831.1\|WP_085953499.1\|1251291_1252671_+\|nodulation-protein-NfeD	gnl\|CDD\|223961	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones].	1.00087e-71
NC_011831.1\|WP_012616281.1\|1231274_1231634_-\|OadG-family-protein	gnl\|CDD\|377277	pfam04277, OAD_gamma, Oxaloacetate decarboxylase, gamma chain.	4.03861e-10
NC_011831.1\|WP_012616283.1\|1234748_1237493_+\|hypothetical-protein	gnl\|CDD\|378373	pfam10060, DUF2298, Uncharacterized membrane protein (DUF2298). This domain, found in various hypothetical bacterial proteins, has no known function.	4.12676e-06
NC_011831.1\|WP_012616280.1\|1230814_1231210_-\|biotin/lipoyl-binding-protein	gnl\|CDD\|236449	PRK09282, PRK09282, pyruvate carboxylase subunit B; Validated.	3.76257e-25
NC_011831.1\|WP_085953537.1\|1250991_1251183_+\|DUF951-domain-containing-protein	gnl\|CDD\|377606	pfam06107, DUF951, Bacterial protein of unknown function (DUF951). This family consists of several short hypothetical bacterial proteins of unknown function. Structural modelling suggests this domain may bind nucleic acids.	1.01035e-25
NC_011831.1\|WP_012616282.1\|1231661_1233245_-\|methylmalonyl-CoA-carboxyltransferase	gnl\|CDD\|130187	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. [Energy metabolism, ATP-proton motive force interconversion, Energy metabolism, Fermentation, Transport and binding proteins, Cations and iron carrying compounds].	0
NC_011831.1\|WP_012616296.1\|1254658_1256107_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NC_011831.1\|WP_012616291.1\|1249781_1251008_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	2.2162e-109
NC_011831.1\|WP_012616288.1\|1244184_1245123_+\|diguanylate-cyclase	gnl\|CDD\|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	9.88817e-91
NC_011831.1\|WP_012616278.1\|1228756_1229662_+\|NADH:flavin-oxidoreductase	gnl\|CDD\|239201	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	8.79622e-44

>NC_011831.1|WP_012616284.1|1237512_1240242_+|hypothetical-protein
MQDQFVRWMRVSWPFLWFLVLTILWTWPLAMQMTTVLPGSGSDPLFQVWTLAWDGHALLTNPARIWDAPIFFPYPTTLAYSDHHIVLALLMLPVLAFGQPVAAYNALLLLSFALSGWAVCLLTHDILAEHTEEPAATIGALLAGSLFAFSTYRMAHLSHLQMLQTAWLPLALYWLRQMAVRSGGAFWRAAALTGVFAGVQAVTAVYYAPMAALAVGVAAFVWLWPARWRSPLARRAVGRSIGGLALAGAVAVLIALPFLLPYMMVYAYLGIVRSPGELVRWSAPLTAYLSVPAGNVLYGAGLTPVQPGSEQELLLFPGALAVVLAGIGGWRWWRAARRDGLALLLIGAAGVVLSLGVALRVRSDEAGVVAALPYGWLYERVPGFNALRVPARWWMLGSLAVAVLAGMGAAWLWRGWGRWLVPVVGVLALLEHLVWPIPRLELPAPPPVYQWLAQSSPSAHRVVLELPLDTKLSGIFSERVAWRQFYQIQHWRTLVIGYSGLIPAGTYNLLLRLQQLPDDATIRYLARLGIDTLIIHRNEFNDQAQLANLMAWADRTNVLQRLAETGDAVVYALQPDRTLATLVTPASTIFLSGDVLIPDLVALALQRRWQAAGAVVYGPGREQYYPALATPQSGQRFDYVALAPRADPRPFGTMPALVRWQEEGVAVYAVPAELLATQELGAPDIGQFHPRHPATLTVRLRGDSVEVGRSRIALPTVVEAATLLLDVASLTEQEVQVGETKQRLAAGGQTLTVPISRDQPVTISGDAATFSIVRVQLWRGMPALDAVGGVALTVESAFAGSRLRIAAQYSGNTPLLLEIHGAEAGTERPVMLARGTLPVSAAGAVDVTIDARQPQAAWLSQSPAAVDGRYIAYVKLSPDTDGIPIAQFQVRNGEVVAAQPVPLPLTILR
>NC_011831.1|WP_012616283.1|1234748_1237493_+|hypothetical-protein
MTAENRLRLPYWWRVSWPFLWFLVLTILWTWPLAMEMTTALPGSGADPLLQTWILAWDGHALLHHPASVWDAPIFFPYPRTLTYNDHHLLWAVVMLPVLAFGQPVAAYNALLLLSFALSGWAVCLLTHDILAEHTEEPAATIGALLAGGLFAFSTYRMAHLAHLNLLQTAWLPLALYWLRQMAVRSGGAFWRAAALTGVFAGVQAVTAVYYAPMAALAVGVAAFVWLWPARWRSPLARRAVGRSIGGLALAGAVAVLIALPFLLPYMMVYAYLGIVRSPGELVRWSAPLTAYLSVPAGNVLYGAGLTPVQPGSEQELLLFPGALAVVLAGIGGWRWWRAARRDGLALLLIGAAGVVLSLGVALRVRSDEAGVVAALPYGWLYERVPGFNALRVPARWWMLGSLAVAVLAGMGAAWLWRGWGRWLVPVVGVLALLEHLVWPIPRIELPAPPPVYQWLAQSSPSAHRVVLELPAEAAEEATPVRAWYQFFQITHWRTLVNGYSGLTPAGSLDVVRRLRRLPDDDTVRYIARLGVDTLIIHRDRYDEPAKLAHLLQWAQATPWLEPQGVFADAIVYAIKPDPSLETLVSAGDRIYIDNNDRIPGMVALTLAHRWQTAGAMVYGLKRLRYYPALATPPDGQLFDYVVLARGTDPRPFGTMPALVRWQEEGVAVYAVPAELLATQELGAPDIGQFHPRHPATLTVRLRGDSVEVGRSRIALPTVVEAATLLLDVASLTEQEVQVGETKQRLAAGGQTLTVPISRDQPVTISGDAATFSIVRVQLWRGMPALDAVGGVALTVESAFAGSQLQLLARLSRATEVTLEIYGSTPWYEKPVHLLTGKLTTTDSTEPSTLTVDLIQPSAPWLEYAVPAVDGRYIAYLRIAGQASTDGLPVAKFTVRNGQVVDAQPLPAPLTIVR
>NC_011831.1|WP_012616282.1|1231661_1233245_-|methylmalonyl-CoA-carboxyltransferase
MTQRDTESSAAAPLTLRARIEALRQQRHQLEQGGGPDRIARQHQAGKLTARERIHLLIDHDTFQELYLFARHRCTAFGMADKEMPGEGVITGCGSVDGRQVFVAAQDFTVAGGSVGEMHADKICQTMDLALKCGSPFITINDSGGARIQEGIDALSGYGRIFYRNVLLSGVVPQIAIIAGPCAGGAAYSPALMDFIIMVRGSEMFITGPEVLKQVTGEHVTGEELGGPEAQVRSGVAHFIAENDQEAIAICKRLLSFLPSNNLEDPPDRGDGELRIFSDPALDTIIPDDPREPYDVIPIIKRLVDDGDFMEVQRGFADNAVIGFARIDGNTVGIVANQPMVMAGVLDIDASDKIARFVRFCNAFNIPLITFVDVPGFLPGVAQERGGIIRHGAKMLFAYSAATTPKITVILRKAYGGAYLAMCGKDLGADRVAAWPSSEIAVMGPEGAVNIIYREQIKQAADPAAARAEFVRLYRAEFASPYVGASRNLIDSIIAPSETRRYLSLALASLRTKREFRPQKKHGLVPL
>NC_011831.1|WP_012616281.1|1231274_1231634_-|OadG-family-protein
MIDPTADPLIVGVQIALTGMSIVFVVLTIIAFALSALRASQHLFRRRPKVSQPVVSSPPSTPTPADRLDPQLVAVLAAAAFATLGQPVRIVRVRYYRQMSGMWARLGRVSVMAARQLRR
>NC_011831.1|WP_012616280.1|1230814_1231210_-|biotin/lipoyl-binding-protein
MKRLRITVNGMVYEVEVEVLSDDDEAVVAAPTSFAAPPPARSAVPPAVSSSTTTPNTHQSGPGVLVSPIAGIVAEIKVNVGDQVKENDPLVVIEAMKMNSNVSSPVAGTIRAINVKVGDSVRQGQPLLEFA
>NC_011831.1|WP_012616279.1|1229648_1230815_-|sodium-ion-translocating-decarboxylase-subunit-beta
MEWLIGFFEASGLAHLAWGNLLMIVVGCVFVYLAIARGFEPLLLVPIGFGIILGNMPFEPGMGQGVYDQGSVLSYIYFGVITGIFPPLIFLGIGAMTDFSALIAQPRLILLGAAAQLGIFFTLLMAIFLGSRLPFLDLAGDDPLRLLRAAAAIGIIGGADGPTAIFIASRLAPDLLGAIAVSAYSYMALVPVIQPPIMRLLTTRQERLIRMPPPPEVDRTQRILFPIIGLIVCVLIVPDTLPLLGMLFFGNLLKESGVTERLAKTARSALIDSVTIMLGLTVGASTQAGNFLTPRSIAIFALGACAFAISTAGGVLFAKFYNLFTNNKVNPLIGAAGVSAVPMSARVAHTLAQEEDRQNYLIWQAMCPNVAGVIGSAVAAGVLLVILR
>NC_011831.1|WP_012616278.1|1228756_1229662_+|NADH:flavin-oxidoreductase
MADLFTPIQVAGRQIANRIVMAPAPSGLAGTDGFCHGALTSFYERRAQAGVGLIIGEPMLIYAPPTPIPHLGIWHDCFLPGLRRLVAAAHAFGSRIAFLLEAPAIAQIPTTLVDDYVQAAWRALATGADGVFISIADDGMLTRLVSPSRATDNGIGPVVNERILPVLTVLEQMRHLFGRRLWIGLRMPAAELIPNGLSHQDARLIARRAVAAGAQLLDVTLTRYTADVARFPGWTLPLVAGIRRIANEAVVIGSGQLSDPWLADAAVQDGSVDLVMLCTALRCMPEWPKLAKRLLLPVSVR
>NC_011831.1|WP_012616277.1|1227479_1228604_-|L,D-transpeptidase
MSYPILPTTHHRHITTTLSLLAISILGWLYWFHPVIAHPTAARSRLPVVRTVYFPATGHHLSNRVGFLDFWRANGQLHTFGMPITEELVVDGRIVQYFERARFEYHPEYAGTPQQVQLGLLGREWLDRQGLVMPPASAGEGAFFAETGYWVSGEFLEFWERHGGLPVFGFPISETFNDNGVMTQYFERAWLRYRPEALSPFLRQQQLIYGFDLDTLDEVQIDDLGRRVAEQLGLSTAPVARLPGAPDWSPALWQRRIEVDLTRQRLFAYEDDLLVFTAPVATGRDGFNTPRGEFAIYYRLPEQTMADCLGGECWYVPNIPWVQYVVGGVALHGTYWHNAHGTGVRMSHGCINLRIDDAQWLYAWADLGVPVRVY
>NC_011831.1|WP_041470368.1|1226260_1227397_-|hypothetical-protein
MLYVPDGVLPLVASSVARLERCLPQPGDILVRQGGQVEPDDVIARGLSQPQPYLINLARDLGLPPAQAARAVVAPIGQPINAGAVIARRRGLTGRRVLSPVNGTLTMVDEATGYAFVVPEPRQITLTAGIRGIVMEIVNNQRVVIETPAAQLYGVGSFGPDCNGVTRLLTLDPAEPITEAMIDAQSMYAVVIGGSGISAAALRKAVEHQVRGVIVGSIAESELRDFFRLSKKRLPWTIGVRNWQWSGLIESPLTIVITEGIGNAPMAAPLFKLLATYDRREVFIESSAGLRRPHRRPRVIIPLSRSSSTALEPPRPPLRVGARVRLLSHDHLGHLGQIRSLPVFPQRLPSGVRTAAVEVLLETGEAIWLPRSCVEVIA
>NC_011831.1|WP_012616275.1|1224974_1226147_-|response-regulator
MTYRIVVVARANPVLRSLPEALAGDATVQIFDSANEALWSISTEPPDLVLSELELDEMSGLDLAEIVPNFDPNTRVVLWGSGITAADRARAKAAGVSTVLSGDVSLDAVRAAVSTALQATHHESTPPTPSPAPVASEPTRREPPAPSTKSSMRESTHREPPVAKETSPAPEPTARRDFTPARIVLPSRAEREAAERAAREAAEREAAEREAAEREASTAKSSLAARSRAAVERRAGSSAASSSAAEPPIGWRSDGRNLIVTEQNIAAIRSIMGQLGQDLGTQSIMLTDRAGMILVETGDKGNLPLMVVLPLLSTGFSTTGEVARQLREEDATSVYIHEGVNIDLYCFDVAQRFLLVLVFNKRVASSKIGAVWVNAKRAIRELREVLAKSS
>NC_011831.1|WP_012616288.1|1244184_1245123_+|diguanylate-cyclase
MPDNRTPTILIVDDTPANLLLLTQLLVGQSYDVRPVTQGRQAIAAVRAIRPDLILLDIRMPDMDGYTVCQTLKADPETNQIPIIFISALDDTEDKVRAFECGGVDYITKPFQPAEVLARVRTHLALAQARIALETANRELQRALAREAELARIDWLTGVYNRSHFYELATYEFAIATRYDQPLAICMFDVDHFKHINDQYGHLIGDQVLRTIAQTAARQIRTADCIGRFGGEEFILLLPNTTMEAGLNLAERLRVAVAALEIHTEKGTITATISLGVAGRQPADTMIERIIDRADQALYAAKRQGRNCVVGV
>NC_011831.1|WP_012616289.1|1247026_1248850_+|elongation-factor-4
MSDQLHIRNFSIIAHVDHGKTTLSDRLLEATRTITEREQREQLLDSLDLEREKGITIKLKPVRMEYRAADGQLYQLNLIDTPGHVDFSYEVNRSLAACEGALLVVDASQGIEAQTLANTYLALENDLVIIPVINKIDLPGAHPEEVAQEIESVIGIPAEEAIFASAKEGIGVPEILEAIVKRIPPPRGQRQQPARALIFDSHYDPYKGVIAYVRVVDGVFTARDRVRFMGTGAQAETLELGIFRPAMTPLNELVAGEVGYIATGLKSVADCQVGDTITLVDAPAGEPLPGYRPAKPMVFAGLYPIDSNAYPELREALERLKLNDAALSFQPESSAALGFGFRCGFLGLLHMEIVRERLEREYKLELLITAPSVEYQVLLSDGEIVTVANPSEMPDLSRIEAIEEPVVEISVITPVRYIGTIMDLVTNRRGVFISMDYLDPTRVLLKYRMPLAEIVIDFYDQLKSRTQGYASLDYHLAGYQEADLVKLDILVNGQPVDALSLIVHRDFAYQRGRDLVERLRQLIPRQMFEVPIQAAIGSKIIARETIRALRKDVLAKCYGGDVTRKRKLLEKQKEGKKRMKMVGSVEIPQEAFMAILSLNESGNERER
>NC_011831.1|WP_012616290.1|1248876_1249785_+|peptidyl-prolyl-cis-trans-isomerase
MRRLIWLLTLFLLAGCQSVVNGRQWIETDSPVAFRLGTQVYTVADVNNEIKRAIGDGIANALASGQTREQIEQIVVENDLRRQIFEQMIQNELLLYYARQHGIGVDPVALDAVVFNRISNDASPAEVLDQRSVLAREQIVLEIIARNTRADMAHARHILVDDEASAQAILADLQGGANFATLAATRSRDTASAANGGDLGWATRGDFVPAFEEAIFTLPLNTPQIVKTDFGFHVVEVLERELQRPFDTFEQLRVRQNAGQFYQETFVPWYEELRRQFELSGELQIADGFDPNALPIPFPETP
>NC_011831.1|WP_012616291.1|1249781_1251008_+|nucleoside-triphosphate-pyrophosphohydrolase
MSTTLHTVLHLAVNQDLIDPAALQVWSVERLLQPSPRPTATRVLPWVEQQGLGSYQPVRLPYPLATHTPALIWGEPATLNLTALATLLAERYPTNHRLFVLTAPEGSTIPLTVAELATAILPPDEVIGIVVPALSLAEDQRSLDRLRWVIGRLCGPDGCPWDVRQTHQSLRRTFLEEVYEALEAIDTGDMRHLCEELGDVLMQVFVHSEMARQAGYFTLESVVQHVADKLIFRHPHVFGTTSVTDTGEVLQNWEALKAQELATKGQVRSSALDGIPSALPALATAQTLARKAIQAGFTWTTIEQVWAKIAEELAELREADDSAAQKRELGDLLFALTILAHWLQLDAESALREANLRFKQRFQQVEQMAARSGRNLRDCTLDELIAWWTAAKMMRNEHTDGTTNSAVP
>NC_011831.1|WP_085953537.1|1250991_1251183_+|DUF951-domain-containing-protein
MPLYRNDIVQLRKPHACGGDTWRIVRLGADIGLRCETCGRRVLLPRAELERRIKRFVARGADE
>NC_011831.1|WP_085953499.1|1251291_1252671_+|nodulation-protein-NfeD
MQGRMVQHRLSPYPTPQWRSVWRYFIIGLLWSVLVTGIAAQSTQPVYVAEYEGVLSTYAAGYLRRALHEAEAANAQVLVMQLTPHGAVLEEVRKLANDIANARVPVVVYIGPSGHDAGAAGSWLLPAAHIAAMAPDSRFGIATPLFVPTMGMSNDTQELLLNEQLQQFEVWGQAHNRNVDWADTALRSGFIATAAQAIEAQPPIIDLVARDRTELLQRLEGRVVTLADGRQITLATLGARPFVVEVNLLEAFLIVLANPTVVFLLLIMAGLAFYAEFLSPTVGILAGLGVLLLIGAIIGMIALPVQWLSVLGILIAFGLIAADLFVPSHGTLTVIGVGIMIASALTLFDATQAPGVVVALWVIILVAMIIAIFAVTGVWLALRSRNRPVTTGQEGLIGRLAEVRQRLDPEGMVFVEGALWRAVCENGTAEAGEWVRVTGIYALRLTVRRLEPSELSSPS
>NC_011831.1|WP_012616294.1|1252742_1253540_+|slipin-family-protein
MNGFTFFLLACLAVLAFIALMILLSAIKIVPEYERGVIFRLGRLMGPRGPGIFFVIPIFERMVRVDMRVITMDVPVQEVITLDNVTIKVNAVLYFQVINPNWAVTKVMDYIRATMQIAQTTLRSVVGQVELDELLAQREKINQKLQQIIDEQTEPWGIKVTIVEVKDVELPQNMQRAMARQAEAEREKRAKLIHADGELQASRTLAEAARVLASEPVTLQLRYLQTLTEIATEKNSTIIFPLPIELLKTFLAPQSVNNDVVRSSD
>NC_011831.1|WP_012616295.1|1253636_1254530_-|EamA-family-transporter
MSTLNEAQRPFDIAMVVIAALSWGTIGVAVGWLYRLTETNSLSIGFLRLLLSAPVLLITARMLAGPQAFRIKPRHRWVLALIGSAFAGYQVAYFAAIPYLGVAAAVLINICSAPIFTALLARAFLGERLRPSTGLAIGGAVIGAGLLAGGAPQVQSTNDLLVGAALALTAGFSYSLVVLGARLVAADYHPVVPVALSFTLGALLLLPVALSTGLAIDYPPLGWLVLGYLSVVPTALAYALYVRGMRTVRATTAATISLLEPLGSALLAMILLGERFTATGIVGAVLLVASIAIIARR
>NC_011831.1|WP_012616296.1|1254658_1256107_-|leucyl-aminopeptidase
MQCEVQSGELLATETELAVLLYAEDETLPAEVTALCEPNDANGRWKQQTLLYPRGALPARRLLLIGMGKRSGITADTVRQAAAIAAQRAQELKVSRYHLGYNGHLPLTPQQFGVAFAEGSILGSYRYTRYKSDREETPEITAILQAGSDAPEAVEGVRRGQILAQATTFARDLANGPGNEVTPAFLGQTAVEMGARLGLQVTVLDKAQLIEQGFGGILAVGQGSANEPRFIVMEYGTAGRGPTICLVGKGITFDTGGISIKPAEKMDDMKMDMSGAAAVFGAMQAVAELQLPLHVVGIVCAAENMPSGTAYRPGDIIRTLSGKTVEVLNTDAEGRIVLADGLFYAQRYQPAAIVDLATLTGAIMVALGSHAIGLMGNNQELANRLITAGEATAERVWQLPLWEEYRDAMKSDIADLKNTGGRYGGAITAAGFLAAFVGDYPWAHLDIAGTAWVEKPSRAYQSRGATGVGVRLLVELLQGYVS
>NC_011831.1|WP_012616297.1|1256290_1257352_+|homoserine-dehydrogenase
MTPIIQLGIGGVGRALARQIVAVAPAIRRRYGIDLRYIAIADSRGIIAGDPTVSEEQVHQILAVKEAGHGLDSMTNAITDRHWIELLPATIAIVVDVTATSEHTAPLAAAVSAGHRVVLANKRPLCDEYDLFTALTERGATRYEATVGAGLPVIGVLQGLLDTGDEVLRIEAALSGTLGFLMSALEEGSSFAEAVWKAHALGYTEPDPRDDLSGADVARKALILARTCGIPVPADAVSAESLFPPQLATVSVAEFLQRLPEAEESVMERFAAARAAGNVLRYITCITPDNIEVGLRELPADHPLAGLRGPDNMISFTTRRYHDRPMVIRGPGAGVEVTATGVLSDIIATAREL

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Crispr_ID: NC_011831_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_8

1280081-1281612

Orphan

Consensus_repeat	Method
GTNGCCGTCGGCGTGGCCGT	CRT

19 spacers

The CRISPR arrays of NC_011831_8

>merge|NC_011831|8|1280081-1281612|CRT
GTCGCCGTCGGCGTGGCCGTTGTCGTCGGCGTGTCTGTTGGCGTGGCCGTCGCCGTCGGCGTGGCCGTTGTTGTCGGCGTCGCCGTTGCCGTCGGCGTGGCCATCGCCGTTGCCGTCGGCGTGTCTGTTGGCGTGGCCGTCGCCGTCGGCGTGGCCGTCGCCGTCACCGTCGGCGTATTTGTTGCCGTCGGCGTGGCCATCGCCGTTGCCGTCGGGGTGGCTGTCGCCGTCGGCGTGGCCGTTGCCGTCGGGCTGGCCGTTGTCGTCGGCGTGGCCGTTGTTGTCGGCGTCGCCGTTGCCGTCGGGCTGGCCGTTGCCGTTACCGTCGGCGTGTCTGTCGCCGTCGGCGTGGCCGTTGTCGTCGGCGTGTCTGTCGCTGTCGGCGTGGCCGTTGTTGTCGGCGTGGCCGTTACCGTCGGGCTGGCCGTCGGCGTGGCCGTGGCCGTTGGCGTGGCTGTCGCCGTTGGCGTCGCCGTCGCCGTCGGGGTGTCTGTCGCCGTCGGCGTGGCCGTGGCCGTTGGCGTGGCTGTCGCCGTTGGCGTCGCCGTCGCCGTCGGGGTGTCTGTCGCCGTCGGCGTGGCCGTTGTCGTCGGCGTGTCTGTCGCCGTCGGCGTGGCCGTTGCCGTTACCGTCGGCGTGTCAGTTGGCGTGGCCGTCGGCGTGGCTGTCGCCGTCACCGTCGGCGTGTCAGTTGGCGTGGCCGTCGGCGTGGCCGTTGGCGTTGCCATTACCGTCGGGGTGTATGTCGCCGTCGGCGTGGCCGTTGGCGTCGGGGTGTCTGTCGCCATCGGCGTCGCCGTTGCCGTCGGGCTGGCCGTTACCGTCGGCGTGTCTGTCGCCGTCGGCGTGGCCGTGGCCGTTGGCGTGGCTGTCGCCGTCACCGTCGGCGTGTCAGTTGGCGTGGCCGTCGGCGTCGCCGTTGCCGTTGCCGTTACCGTCGGCGTGTCTGTCGCCGTTGGCGTCGCCGTCGCCGTCGGGGTGTCTGTCGCCGTCGGCGTGTCTGTTGGCGTGGCCGTCGGCGTGGCCGTTGCCGTTGCCGTTACCGTCGGGGTGTCTGTCGCCGTCGGCGTGGCCGTGGCCGTTGGCGTGGCCGTCGCCGTCACCGTCGGCGTGTCAGTTGGCGTGGCCGTCGGCGTGGCCGTTACCGTCGGGCTGGCCGTCGGCGTGGCCGTTGTCGTCGGCGTGTCTGTCGCCGTTGGCGTCGCCGTCGCCGTCGGGGTGTCTGTCGCCGTCGGCGTGTCTGTTGGCGTCGCCGTCGGCGTGTCTGTTGGCGTCGCCGTCGGCGTGTCTGTCGGTGTGGCTGTCGCCGTCACCGTCGGGGTATCTGTTGCCGTCGGCGTGGCCGTCGGGGTGGCCGTCGCCGTTACCGTCGGCGTGTCTGTTGGCGTCGCCGTCGGGGTGTCTGTCGGGGTGGCTGTCGGGGTGTCTGTCGGTGTGGCTGTCGCCGTCACCGTCGGGGTATCTGTTGCCGTCGGCGTGTCTGTTGGCGTCGCCGTCGGCGTGTCTGTCGGGGTGGCTGTCGGCGTGTCTGT

>NC_011831|8|3|1280081-1281612|CRT
GTCGCCGTCGGCGTGGCCGT	TGTCGTCGGCGTGTCTGTTGGCGTGGCCGTCGCCGTCGGCGTGGCCGTTGTTGTCGGCGTCGCCGTTGCCGTCGGCGTGGCCATCGCCGTTGCCGTCGGCGTGTCTGTTGGCGTGGCC
GTCGCCGTCGGCGTGGCCGT	CGCCGTCACCGTCGGCGTATTTGTTGCCGTCGGCGTGGCCATCGCCGTTGCCGTCGGGGTGGCTGTCGCCGTCGGCGTGGCCGTTGCCGTCGGGCTGGCC
GTTGTCGTCGGCGTGGCCGT	TGTTGTCGGCGTCGCCGTTGCCGTCGGGCTGGCCGTTGCCGTTACCGTCGGCGTGTCTGTCGCCGTCGGCGTGGCCGTTGTCGTCGGCGTGTCT
GTCGCTGTCGGCGTGGCCGT	TGTTGTCGGCGTGGCCGTTACCGTCGGGCTGGCCGTCGGCGTGGCCGTGGCCGTTGGCGTGGCTGTCGCCGTTGGCGTCGCCGTCGCCGTCGGGGTGTCT
GTCGCCGTCGGCGTGGCCGT	GGCCGTTGGCGTGGCTGTCGCCGTTGGCGTCGCCGTCGCCGTCGGGGTGTCTGTCGCCGTCGGCGTGGCCGTTGTCGTCGGCGTGTCT
GTCGCCGTCGGCGTGGCCGT	TGCCGTTACCGTCGGCGTGTCAGTTGGCGTGGCCGTCGGCGTGGCTGTCGCCGTCACCGTCGGCGTGTCAGTTGGC
GTGGCCGTCGGCGTGGCCGT	TGGCGTTGCCATTACCGTCGGGGTGTATGTCGCCGTCGGCGTGGCCGTTGGCGTCGGGGTGTCT
GTCGCCATCGGCGTCGCCGT	TGCCGTCGGGCTGGCCGTTACCGTCGGCGTGTCT
GTCGCCGTCGGCGTGGCCGT	GGCCGTTGGCGTGGCTGTCGCCGTCACCGTCGGCGTGTCAGTTGGC
GTGGCCGTCGGCGTCGCCGT	TGCCGTTGCCGTTACCGTCGGCGTGTCT
GTCGCCGTTGGCGTCGCCGT	CGCCGTCGGGGTGTCTGTCGCCGTCGGCGTGTCTGTTGGC
GTGGCCGTCGGCGTGGCCGT	TGCCGTTGCCGTTACCGTCGGGGTGTCT
GTCGCCGTCGGCGTGGCCGT	GGCCGTTGGCGTGGCCGTCGCCGTCACCGTCGGC
GTGTCAGTTGGCGTGGCCGT	CGGCGTGGCCGTTACCGTCGGG
CTGGCCGTCGGCGTGGCCGT	TGTCGTCGGCGTGTCTGTCGCCGTTGGCGTCGCCGTCGCCGTCGGGGTGTCT
GTCGCCGTCGGCGTGTCTGT	TGGCGTCGCCGTCGGCGTGTCTGTTGGC
GTCGCCGTCGGCGTGTCTGT	CGGTGTGGCTGTCGCCGTCACCGTCGGGGTATCTGTTGCCGTCGGCGTGGCCGTCGGGGTGGCCGTCGCC
GTTACCGTCGGCGTGTCTGT	TGGCGTCGCCGTCGGGGTGTCTGTCGGGGTGGCTGTCGGGGTGTCTGTCGGTGTGGCTGTCGCC
GTCACCGTCGGGGTATCTGT	TGCCGTCGGCGTGTCTGTTGGCGTCGCCGTCGGCGTGTCTGTCGGG
GTGGCTGTCGGCGTGTCTGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012616319.1\|1289456_1289954_-\|NADH-quinone-oxidoreductase-subunit-NuoI	unknown	unknown	gnl\|CDD\|235637
NC_011831.1\|WP_012616315.1\|1284909_1286487_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235622
NC_011831.1\|WP_041470369.1\|1279402_1279756_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616306.1\|1272371_1273511_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|366501
NC_011831.1\|WP_012616318.1\|1288859_1289366_-\|NADH-quinone-oxidoreductase-subunit-J	unknown	unknown	gnl\|CDD\|235844
NC_011831.1\|WP_012616310.1\|1275434_1277147_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223893
NC_011831.1\|WP_012616307.1\|1273514_1273703_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616316.1\|1286622_1288551_-\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836
NC_011831.1\|WP_012616311.1\|1278505_1279291_+\|enoyl-ACP-reductase	unknown	unknown	gnl\|CDD\|223696
NC_011831.1\|WP_012616309.1\|1274218_1274674_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239645
NC_011831.1\|WP_012616323.1\|1295464_1296157_-\|NADH-quinone-oxidoreductase-subunit-NuoE	unknown	unknown	gnl\|CDD\|376507
NC_011831.1\|WP_085953501.1\|1294124_1295438_-\|NADH-quinone-oxidoreductase-subunit-NuoF	unknown	unknown	gnl\|CDD\|224806
NC_011831.1\|WP_012616321.1\|1291256_1293968_-\|NADH-quinone-oxidoreductase-subunit-NuoG	unknown	unknown	gnl\|CDD\|273904
NC_011831.1\|WP_012616304.1\|1270290_1271076_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NC_011831.1\|WP_012259161.1\|1274684_1275236_-\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|238239
NC_011831.1\|WP_012616320.1\|1290019_1291243_-\|NADH-quinone-oxidoreductase-subunit-NuoH	unknown	unknown	gnl\|CDD\|235692
NC_011831.1\|WP_012616317.1\|1288557_1288860_-\|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl\|CDD\|180218
NC_011831.1\|WP_012616308.1\|1273760_1274222_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|376735
NC_011831.1\|WP_012616314.1\|1283323_1284793_-\|NADH-quinone-oxidoreductase-subunit-N	unknown	unknown	gnl\|CDD\|235603
NC_011831.1\|WP_012616305.1\|1271265_1272354_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349944

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012616319.1\|1289456_1289954_-\|NADH-quinone-oxidoreductase-subunit-NuoI	gnl\|CDD\|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	5.01895e-69
NC_011831.1\|WP_012616315.1\|1284909_1286487_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	0
NC_011831.1\|WP_012616321.1\|1291256_1293968_-\|NADH-quinone-oxidoreductase-subunit-NuoG	gnl\|CDD\|273904	TIGR01973, NADH-quinone_oxidoreductase_subunit_G, NADH-quinone oxidoreductase, chain G. This model represents the G subunit (one of 14: A->N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes related subunits from formate dehydrogenase complexes. [Energy metabolism, Electron transport].	0
NC_011831.1\|WP_012616306.1\|1272371_1273511_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|366501	pfam01170, UPF0020, Putative RNA methylase family UPF0020. This domain is probably a methylase. It is associated with the THUMP domain that also occurs with RNA modification domains.	5.19658e-30
NC_011831.1\|WP_012616318.1\|1288859_1289366_-\|NADH-quinone-oxidoreductase-subunit-J	gnl\|CDD\|235844	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J.	1.26727e-36
NC_011831.1\|WP_012616310.1\|1275434_1277147_-\|hypothetical-protein	gnl\|CDD\|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	0.000489674
NC_011831.1\|WP_012616316.1\|1286622_1288551_-\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	0
NC_011831.1\|WP_012616311.1\|1278505_1279291_+\|enoyl-ACP-reductase	gnl\|CDD\|223696	COG0623, FabI, Enoyl-[acyl-carrier-protein].	5.4891e-147
NC_011831.1\|WP_012616309.1\|1274218_1274674_-\|NUDIX-hydrolase	gnl\|CDD\|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	8.15343e-48
NC_011831.1\|WP_012616323.1\|1295464_1296157_-\|NADH-quinone-oxidoreductase-subunit-NuoE	gnl\|CDD\|376507	pfam01257, 2Fe-2S_thioredx, Thioredoxin-like [2Fe-2S] ferredoxin.	3.56064e-71
NC_011831.1\|WP_085953501.1\|1294124_1295438_-\|NADH-quinone-oxidoreductase-subunit-NuoF	gnl\|CDD\|224806	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion].	0
NC_011831.1\|WP_012616304.1\|1270290_1271076_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	1.00289e-45
NC_011831.1\|WP_012259161.1\|1274684_1275236_-\|inorganic-diphosphatase	gnl\|CDD\|238239	cd00412, pyrophosphatase, Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.	2.16126e-78
NC_011831.1\|WP_012616320.1\|1290019_1291243_-\|NADH-quinone-oxidoreductase-subunit-NuoH	gnl\|CDD\|235692	PRK06076, PRK06076, NADH-quinone oxidoreductase subunit NuoH.	1.63505e-137
NC_011831.1\|WP_012616317.1\|1288557_1288860_-\|NADH-quinone-oxidoreductase-subunit-NuoK	gnl\|CDD\|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	2.05326e-37
NC_011831.1\|WP_012616308.1\|1273760_1274222_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|376735	pfam02130, UPF0054, Uncharacterized protein family UPF0054.	1.32721e-54
NC_011831.1\|WP_012616314.1\|1283323_1284793_-\|NADH-quinone-oxidoreductase-subunit-N	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	1.04822e-150
NC_011831.1\|WP_012616305.1\|1271265_1272354_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349944	cd08659, M20_ArgE_DapE-like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like. Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE) like family of enzymes catalyze analogous reactions and share a common activator, the metal ion (usually Co2+ or Zn2+). ArgE catalyzes a broad range of substrates, including N-acetylornithine, alpha-N-acetylmethionine and alpha-N-formylmethionine, while DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. Proteins in this family are mostly bacterial and have been inferred by homology as being related to both ArgE and DapE. This family also includes N-acetyl-L-citrulline deacetylase (ACDase; acetylcitrulline deacetylase), a unique, novel enzyme found in Xanthomonas campestris, a plant pathogen, in which N-acetyl-L-ornithine is the substrate for transcarbamoylation reaction, and the product is N-acetyl-L-citrulline. Thus, in the arginine biosynthesis pathway, ACDase subsequently catalyzes the hydrolysis of N-acetyl-L-citrulline to acetate and L-citrulline.	1.88827e-62

>NC_011831.1|WP_041470369.1|1279402_1279756_+|hypothetical-protein
MVEVAVVSTDSATAQRLAALITGHDFRVTTYTPDALPATLPALFIIAMPALSSPEEQVIERLRADETTANVPIVIASALPMNELQSVPYASDWTIAIVPEPVEATVLIETINFLLGQ
>NC_011831.1|WP_012616311.1|1278505_1279291_+|enoyl-ACP-reductase
MGLMEGKKGLILGVANDRSIAWGIAQALHREGATIGFTYLGEALERRVRPLAESMNAPLIEPCDVSKDEDIAALMERTRATFGQIDFLVHAIAFANKEELSGTILNTTREGFRIALEISAYSLIALVKAAEPLFAPNASVLTLTYHGSRQVIGSYNVMGVAKAALEASVRYLAAGLGPRGIRVNAISAGPIRTLAASGIANFRSLHKHFAEYAPLRRNVTIEDVGNAALYLCSPLSAGVTGEIHYVDGGFNVVVPGSSDEL
>NC_011831.1|WP_012616310.1|1275434_1277147_-|hypothetical-protein
MVLCRLSLLCLLVLVGCTGLGTTPPTQSSLPNVPPTVALPLPLPTVVPTLPPTSTPLASTPTPIPPTPLPQPVVLAPTYSEEILFLRGGSLVAIDPSSNQERVLANNVRDVAIDPTGRHIAVASNQIISLIDRSSGAAQTLVSGRIAYGLSWAPDGLTLAYAAAPQPPTLPFDWMQWSNWCATATVYLIDLPTLNELTIGSGCDPVFASDGRRLAFATSPSAQPSSLNFPGQTNAIRLVNRAGANAWDLATANGSTGLGYLVYRPTWLPDAKMVAYQRFFGYQALVDLNLTMITDSSGGTENPTLIGTGWLRPPAFSPDGRYVASVEYNFSDARGFSGYDVWSFALVELVGQRSEASPSGNLTLLGQLVTKLPRITSAAWSPNGNNLVVLAPANWNPTDNPNDPLYSFTTPGELWLLSSGGQPQQTVNSNVDYASPLIWAYEGLVTAQMGSAMIRYPANWQLSPVTNNGELVATGNGRFIGRRTVANPALLNGSTWMQTVSDWVSVTQANQPYQMPDGSYLATFTGQAADGSSIGGAARFDTTTIIISYASASAWPNERAFGIGLAFAAQ
>NC_011831.1|WP_012259161.1|1274684_1275236_-|inorganic-diphosphatase
MQNLWHDLEPGPDVPNVIHVVVEIPKGSRNKYEFDKRIGAFRLDRVLYSAVQYPGDYGFMPQTYYDDGDPLDVLVMTNLPTFPGCIVEARPLGLFRMLDKGEPDDKVLAVLQYDPFFADYHNYTALPAHYLREVEHFFTVYKDLEGSRVEPVGWESADVARERIQYSIDRYWDMRAGRVLKRA
>NC_011831.1|WP_012616309.1|1274218_1274674_-|NUDIX-hydrolase
MTSRRSLSHRTAYSAGGVIYRIVAPQIEVALIATDRGERWGLPKGHVNRGETAEAAAVREVAEETGLFGVVERHLATIEYWFRSGSGRVHKYVDLFLLRYEHGEIRPQAGEVDDARWFTLDEALQRVSFERERDVLLLARQILCGVRDSPP
>NC_011831.1|WP_012616308.1|1273760_1274222_-|rRNA-maturation-RNase-YbeY
MTYTVEVLVDDDLAVDAALVERAAQAVLTAEQVPAGCEVCIRITTDAELHRLNRDFRGVDAPTDVLSFADDGNSSQFVTAPNLPRYLGDIAISYDRVLVQAAEYGHSPARELAYLTVHGMLHLLGYDHERGPADEALMRAREEAVMTALGLPR
>NC_011831.1|WP_012616307.1|1273514_1273703_+|hypothetical-protein
MPRQLRSLIRMLIVVFVLWLIWSRLHIVIWVPMPWWGLVLLVVGSYLVIEYAIDRLLGQRRR
>NC_011831.1|WP_012616306.1|1272371_1273511_+|methyltransferase-domain-containing-protein
MLYLLQTLPGLAALTWREVEQKIHTDERTAPRQVGVRNVPGRNDLILLDYQGSPRRLLELRTIEDVFVVATRGFKIAPDERGLRQIHAATRNEEVVKPALTLWQRLNGGKRNGSFRVVARMVGKHRFQRYELGRAVSDAIRDGWPGRWQPVNEEADLEVWATLIEQELIVAIRLSDASLRIRGKIAHLPASLRPALAATMVMLTQPAADDIFLDPMAGVGTILLERAAAGPFTALYGGDISPAAVTAMQANLRGIHGQITVRRWNATKLPLPDASVTKVAVNLPFGTQIGEGEDLEELYHDVLRQIARVLKPGGRLVTLVANQQLLDRARTHAAPVLRATARHRVLVLGHRATICEHIRVPDTAAAPPPPIPAEDDDWE
>NC_011831.1|WP_012616305.1|1271265_1272354_+|M20/M25/M40-family-metallo-hydrolase
MSELAEELTRLTCDLIRFETIADRPDQLQAAIDYVAAYVADLPSLHIERSSAGGKPALVMTLRPTRSPRLILNGHLDVVVGQPHQFTPEIRNGRIYGRGSQDMKGSIAVMLRLIRDLATQPNPPDVGFQFVTDEEIGGRHGTGRLRDEGWSCEFMLCLEPTDLGILFEHKGGMWAKLRLPGRAAHGSRPWEGDNPIYRLARGINALAERYPPPTGPHEWRTSVTPTEIHAGAGSRNQVPAEVFVTFDIRWTPDTTPEAIQADLAAVFPDSEFVSVMASAGLRTDPEHHEVERIANLIERHTGQPPRFYREHFATDARYYSHLGIPAICLGPVGAGLHSAEEWVEIASLVTLYHIINDYVKSI
>NC_011831.1|WP_012616304.1|1270290_1271076_+|SDR-family-NAD(P)-dependent-oxidoreductase
MSTFLRRVVLLTGAGGGLGREFAHQLLAAGADLILSSHHPHRLTAAAEFAAHHQTSPHPGRIRALLPADLSDPASCDRLAQQVMHVAPDLDLIIHNAGVGLYGPLNVIPPAAIERLLQINLHAPIRLTAALLPMLRHRPNGQIVFISSILGRAALPNISVYSAAKFGLRGFASGLAADGYCVSTVYPFFTQTDILDAPQYGEGPPRRVPRWLVDQPRPVVRASLAGIAARRRHIFPGWKAKLFAVVAAVAPDLLPPFSRLV
>NC_011831.1|WP_012616314.1|1283323_1284793_-|NADH-quinone-oxidoreductase-subunit-N
MDSLTIPPVDLRLLAPLLVVVTWATVLLLVDVFFIPDGRKKLTGYLAIGGLVVAGLVGLPLWGVTGTTFGGMLRLDPFALTLTWIFLLIGILSITMSLDYLPGQGIEQGEYYPLIMFAVSGMILLAQGTDLIVLFLGIETLSITLYILTGFAYPRLTSEEAAMKYLVLGAFAAGFFVYGIALIFGATGSTRLGEIGAYAASRGIGDLNLTLLLGGAAMVLIAFSFKVALAPFHMWTPDVYEGSPTPVAAFMSVGTKGGALAALVRLLFEGLPTLNEYWLPVLAGLTALTMVVGNLGAVAQTNVKRMLAYSSIGHAGYVMLGVMVAGEQRGPEAFLFYMLVYALSNLGAFAVLIALEHQGENAWRLDDFAGLYQRQPLLAVAMAIFMFSLAGVPPMAGFMAKFYALTAAWEGGLPWLALVGVVTSAIAAFFYLRVIIRMFMTEPEGEPTPTLNRGLTVDIALAAIGTIAIGLIPAPVFALVERSLVVLGG
>NC_011831.1|WP_012616315.1|1284909_1286487_-|NADH-quinone-oxidoreductase-subunit-M
MNQPGFPLLSLILWLPAAGALVLLFVPRANAELARRVSLATMAVVFLLSLLLPLRFETNPLQTTVVGASPVMQFVEEVPWLPIVGATYSLGIDGISLWLVMLTTFLGPIVVLSTWDSVHKDVRNFQILLLILQTAMIGVFLAQDLLLFYLFWEFTLIPMTFLIGIWGSQNRIYAARKFFLYTFAGSVFMLLALIALHILHRNAIAEIEPGFRGTFSFSRFVSDLRAGRLTLDSLTERLLFGAFFLAFAVKVPLWPFHTWLPDAHVEAPTTGSVVLAGVLLKLGGYGMIRYNLTLFPAASQWAAPALAILAVIGIIYGAAVAFAQSDMKKLVAYSSVSHMGFVVLGIFALNTEGISGAVLQMVNHGLSTSALFLMVGVLYERRHTRELAAYGGLWKVMPVFAAFSLLVALSSAGLPGLNGFVGEFTIITGAFRSPLLGWIYVAFAVGGVVLAAAYLLKLFRSIFMGEVHQPDNTKLPDLNRRELTTFALLSIPIVLIGIYPVFFFNGMQYSVAALVADLMAQVAGS
>NC_011831.1|WP_012616316.1|1286622_1288551_-|NADH-quinone-oxidoreductase-subunit-L
MELLIWLIPLLPFIGFLLNVFVIRREREAGLVASGMVAAAFVVTLIAVGMLAGMPPEERRIVSTAWEWISTGSFRVPFAVMFDPLTAVMALLITGVGALIHVYSIGYMHGDPRVVRYFAYLNLFVTMMLFLVMANNLLLLFLGWEGVGLCSFLLIGFWFERKSASEAAVKAFVVNRIGDAAFILAMLAIFAYFGTLNFYGDGESGQLGFLERVGDIAGLKIGPTWQPVFLSTVISFLLLIGATGKSAQFPLFVWLPDAMAGPTPVSALIHAATMVTGGVYLMARTEPLFVASFTTQGWVAWIGALTALLAGTAAMAQWDIKRVLAYSTVSQLGFMVAACGMGAYVAAIFHLLTHGIFKALLFLAAGSVIHGTHDTQDMRRMGGLKDAMPITFRTYLIGALALAGIVPFAGFWSKDEILAHAVSHGHTPIFLILFLTSLLTAFYMGRQIALVFFGTQRDPSYHPHESPSVMTVPLIVLAVGAVIGGAINLPVLHWLTDWLEPVLHEQAGEFNLWLALVATIGAVGMGYLGWWVYTVNAAKIKIGGKDPAYRYSGDIWEGMEEAWYLDRFYQRTVVAGFERLADFLARVFDPQGVDGLVMGIGRFFGSLANGVRALQTGYVRTYALVFTVGVLLVLGFMLWFAR
>NC_011831.1|WP_012616317.1|1288557_1288860_-|NADH-quinone-oxidoreductase-subunit-NuoK
MVPTSYYVLLSAILFTIGVLGVLLRRNAIVIFMSVELMLNAANLALVAFARERLGVEAQAIVFFVITVAAAEVAVGLALLVSIFRTKRTADVDEVSTLKG
>NC_011831.1|WP_012616318.1|1288859_1289366_-|NADH-quinone-oxidoreductase-subunit-J
MELILFLITALIAIVGAVAMVVSRNAVHSALFLLLNFAAIAVLFLLLHAPFLFAIQLTVYAGAIMVLFLFVVMLLGAEKVEDAPDRIAWQQPLALVLGLALLVIAVVVGLGGATTPPPDGEALVPFTDPRSLGGLLFTDYLLPFEVTGFILLIAVVGVVVLSQRGRKI
>NC_011831.1|WP_012616319.1|1289456_1289954_-|NADH-quinone-oxidoreductase-subunit-NuoI
MIKELVKGLGTTLRYLFKPPVTVQYPEVKRPVRERFRGRHELKRFANGQERCIGCALCAAACPADAILVIPAENDPANPRSPGERYAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYELSFYDRRAAIYTKEMLLVPPDKGHGEPPPILQQLNRQPSPPAKIDL
>NC_011831.1|WP_012616320.1|1290019_1291243_-|NADH-quinone-oxidoreductase-subunit-NuoH
MDWLTILIIVIQCFVITLAVTTAFAYLTLFERRLLARLQNRVGPNRAGPAGFLQPAADAVKLFFKEDIVPALADKPVYLLAPALAVIPALIIWAVIPFGCLNLNWDYQACYDPNRTNLWNILQITDLNIGVLYILAITSIGVYGITLAGWASNNKYSMLGGIRSSAQLISYELALGCAVLSVVMTYGTLSTHEIIAQQRGWLWGIIPQLLGFFLYMIAATAEVVRAPFDLVEAEQELTGGYNTEYGSMKFALFFMAEYIKLIAVSALAVTFFFGGWHFPGLDILGREVTALAGPVAGSIVFGIVSLGSFLLKVVVFLFISVWVRASWPRLRYDRLMDLGWKWLLPLGLLNLAYTAVVIVLVPDRVVHSWILFGLGALTIAIAIGFNRTPKPVDNVTLVSDIQLPHGN
>NC_011831.1|WP_012616321.1|1291256_1293968_-|NADH-quinone-oxidoreductase-subunit-NuoG
MSDVTLTIDGVQVTVPAGTNIVDAARQAGIAIPVFCYHPRLKPVGMCRMCLVQVGTPKIDPATRRPVLDANGQPVIAMMPKLQTACTTPVSPGMVVKTTTEEVKFAQRGILEFLLTSHPLDCPVCDKGGECPLQNLTMGWGPAVSRFDYNDKVHFEKPVKLGDLIYLDRERCILCARCVRFQDEIADDPVLGFDNRGRNWMIISKSDPPFNSKFSGNTTDICPVGALTSSDFRFKARVWELQSKPVICTLCPVGCNLTFDMRHDRLMRVMPRENAAVNDIWICDKGRYGHRFIESPDRLTTPLVRRDGKLVPVSWDEALEVVADQLTIVRARYGGNALAGLAGAQLSNEDLYLFQRLLRELGSENIDTGIGGPAALPPDEIGGVLAPGPETDLSKLGAGAVVLVVGADPEEEAPLYMLRLRGIAQRGGKLIVAGLRPTKLERSATTVVRYAPAGELAFAQGLLKAALENGAKPAALERMQGWHELRRSLSQAKLADFAAACGLSEAALTSIAQSFLTAEHSLIVYGWEARSAGPGLVETLAALMILTGKVGKANNGMIALLAGGNSRGAIEMGVRPDAGPGYEPRKQRGLDANGIWAAAQTGKVRAIWLAGVDPAAKLPAARAALEAAEFVVVQDLFLTASAELADVVLPAASVAEREGSYTNAERRVQRSRQACSPVGEARPDWQIVAAVANALAMVPIGSGRNGAIPVKGEAWEYVVASDVADEIAAQVRGYAGITYAALAATGTGGGWGRQFDDAIYYDGTSYANSEGVGLVLPSLAAMISSRLTFTGATTPFTDERPLLLLEQVLAYDGDRHLRGSKLQGLIPPGYVAISTEDAAKLNIHSGDRVRLTSAAGELVIAARVLADLPAGIVLLPAGLADVAAATIETGPRTRVSLAKVVMG
>NC_011831.1|WP_085953501.1|1294124_1295438_-|NADH-quinone-oxidoreductase-subunit-NuoF
MDTMGLTEHIIMRELDIPDISDFAVYRRHGGWEAYRYALTEKTPADIVQMVKDSGLRGRGGAGFPTGMKWSFLPKGVYPRYLLCNCDESEPGTFNNHQIIDKNPHQLIEGVALSAFAIEANTAYIYMRGEFAAAARTLERAIAQAYEAGFLGKNILSTGFDLDIYVHRGAGAYICGEETALMESLEGKIGQPRLKPPFPAVAGLYGKPTIINNVETLANVPRIVEKGVAWYRSHGTEKSPGTKCFSLSGHVNRPGNYELPFGVPLRELIESPEYGGGMKGGRPVKIIIPGGASAPWLTADHLDVPLDYESLAAAGSMLGSGAVIVLNDTVSAPHLAYKMDEFFKHESCGKCTPCREGTHWLVRVLHRMVEEGHATAADIDTLHGIYRQMAGNCFCLLGESAVMPIKSALQLFPHEFEALVKQSSHRNGHHIPLMVHR
>NC_011831.1|WP_012616323.1|1295464_1296157_-|NADH-quinone-oxidoreductase-subunit-NuoE
MTLRETHQTEIESIIARYAGKRSAVLPLLYLAQDTYGYLTDDAIREVAAILELPPTDVYEVVGFYTLFYDRPVGTWVLQVCDDVPCCYCGAEELIAALKQTLGINEEETTPDGMFTLQRVKCLAACDRAPVLQANLNYVYDVTPERVQTLLADLRARAAEARKQGVSGRFAEDYEFTRDGRLVQIERFSPYRPREFVSEPPVAPTTPPPAVAPEADAGLERPDTRKASPL

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Crispr_ID: NC_011831_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_9

1312592-1312687

TypeIII

Consensus_repeat	Method
GCAGCGATCTCCCGCGAGCGTCGAAGGGCG	CRISPRCasFinder

1 spacers

csx1,csm3gr7,csx19,csx10gr5,cas10

The CRISPR arrays of NC_011831_9

>merge|NC_011831|9|1312592-1312687|CRISPRCasFinder
GCAGCGATCTCCCGCGAGCGTCGAAGGGCGAGCGACGTACCATAAGTTTTGGGGGATCGCAAGCAGGCAGCGATCTCCCGCGAGCGTGGAAGGGCG

>NC_011831|9|7|1312592-1312687|CRISPRCasFinder
GCAGCGATCTCCCGCGAGCGTCGAAGGGCG	AGCGACGTACCATAAGTTTTGGGGGATCGCAAGCAG
GCAGCGATCTCCCGCGAGCGTGGAAGGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012616331.1\|1303282_1304239_-\|D-2-hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|240625
NC_011831.1\|WP_012616350.1\|1324541_1326170_-\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl\|CDD\|187810
NC_011831.1\|WP_012616332.1\|1304594_1305164_+\|elongation-factor-P	unknown	unknown	gnl\|CDD\|234788
NC_011831.1\|WP_012616335.1\|1308158_1308689_-\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
NC_011831.1\|WP_012616343.1\|1314842_1316939_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NC_011831.1\|WP_012616328.1\|1299519_1301322_+\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|180792
NC_011831.1\|WP_012616329.1\|1301445_1301826_-\|GxxExxY-protein	unknown	unknown	gnl\|CDD\|275083
NC_011831.1\|WP_012616348.1\|1320411_1322205_-\|hypothetical-protein	csm3gr7	cd09683_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187814
NC_011831.1\|WP_012616342.1\|1313595_1314834_-\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|187863
NC_011831.1\|WP_012616349.1\|1322208_1324545_-\|hypothetical-protein	csx10gr5	cls000715_csx10gr5_CAS-III-D	gnl\|CDD\|131722
NC_011831.1\|WP_012616337.1\|1309213_1310476_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NC_011831.1\|WP_157044828.1\|1328075_1328942_-\|histidine-kinase	csx1	pfam09623_csx1_CAS-III	gnl\|CDD\|187872
NC_011831.1\|WP_012616330.1\|1302031_1303228_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NC_011831.1\|WP_012616338.1\|1310497_1311139_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237865
NC_011831.1\|WP_012616341.1\|1312946_1313528_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_011831.1\|WP_012616347.1\|1319824_1320415_-\|hypothetical-protein	csx19	mkCas0167_csx19_CAS-III-D	unknown
NC_011831.1\|WP_012616346.1\|1317731_1319828_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NC_011831.1\|WP_012616334.1\|1307810_1308104_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NC_011831.1\|WP_012616333.1\|1306167_1307805_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NC_011831.1\|WP_012616351.1\|1326188_1327922_-\|hypothetical-protein	csx1	cd09747_csx1_CAS-III	gnl\|CDD\|378236

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012616331.1\|1303282_1304239_-\|D-2-hydroxyacid-dehydrogenase	gnl\|CDD\|240625	cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants.	2.96474e-142
NC_011831.1\|WP_012616350.1\|1324541_1326170_-\|hypothetical-protein	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	2.87415e-09
NC_011831.1\|WP_012616332.1\|1304594_1305164_+\|elongation-factor-P	gnl\|CDD\|234788	PRK00529, PRK00529, elongation factor P; Validated.	1.20545e-98
NC_011831.1\|WP_012616335.1\|1308158_1308689_-\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	8.5521e-12
NC_011831.1\|WP_012616343.1\|1314842_1316939_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	0
NC_011831.1\|WP_012616328.1\|1299519_1301322_+\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|180792	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed.	0
NC_011831.1\|WP_012616329.1\|1301445_1301826_-\|GxxExxY-protein	gnl\|CDD\|275083	TIGR04256, conserved_hypothetical_protein, GxxExxY protein. Members of this protein family average about 130 residues in length and include an almost perfectly conserved motif GxxExxY. Members occur in a wide range of prokaryotes, including Proteobacteria, Perrucomicrobia, Cyanobacteria, Bacteriodetes, Archaea, etc.	4.67746e-49
NC_011831.1\|WP_012616348.1\|1320411_1322205_-\|hypothetical-protein	gnl\|CDD\|187814	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.12696e-27
NC_011831.1\|WP_012616342.1\|1313595_1314834_-\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	6.14823e-73
NC_011831.1\|WP_012616349.1\|1322208_1324545_-\|hypothetical-protein	gnl\|CDD\|131722	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family. CRISPR is a widespread repeat family in prokaryotes. At least 45 different protein families occur in prokaryotes only when these repeats are present. This family, a minor CRISPR-associated protein family, seems largely restricted to the Cyanobacteria. It belongs to the RAMP superfamily (pfam03787).	5.39612e-19
NC_011831.1\|WP_012616337.1\|1309213_1310476_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.03575e-44
NC_011831.1\|WP_157044828.1\|1328075_1328942_-\|histidine-kinase	gnl\|CDD\|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	1.69406e-51
NC_011831.1\|WP_012616330.1\|1302031_1303228_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.27452e-112
NC_011831.1\|WP_012616338.1\|1310497_1311139_-\|hypothetical-protein	gnl\|CDD\|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	1.62506e-07
NC_011831.1\|WP_012616341.1\|1312946_1313528_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	3.57316e-26
NC_011831.1\|WP_012616346.1\|1317731_1319828_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	0
NC_011831.1\|WP_012616334.1\|1307810_1308104_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	4.02329e-50
NC_011831.1\|WP_012616333.1\|1306167_1307805_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NC_011831.1\|WP_012616351.1\|1326188_1327922_-\|hypothetical-protein	gnl\|CDD\|378236	pfam09670, Cas_Cas02710, CRISPR-associated protein (Cas_Cas02710). Members of this family are found, exclusively in the vicinity of CRISPR repeats and other CRISPR-associated (cas) genes, in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum), Thermus thermophilus (Deinococcus-Thermus), Chloroflexus aurantiacus (Chloroflexi), and Thermomicrobium roseum (Thermomicrobia).	2.3747e-10

>NC_011831.1|WP_012616338.1|1310497_1311139_-|hypothetical-protein
MRTLLLMAIVALFLFTACGTATTSVPAQPTAPPNQPVPTQPPAATRDLAAPVPGVAEPTATQLPDNPAAQPVPAPTETAASLPPTVAPAATLVPTVMPIKESPMPIQPAPPFNAQPLQPPYSPTIEQQIAAAKQDLAQRLRIDAATIEVVSVEAVTWPDGSLGCPRPGMAYTQVLIDGLRILLRVGDQLYPYHSGNNQPPFLCESQMGSRAQP
>NC_011831.1|WP_012616337.1|1309213_1310476_+|MFS-transporter
MPSQPSSALSDIRLGLRANWAQFSLLVFVNAFVGGMVGIERTVLPLLAEADFGIASKTAILSFIFSFGIVKALANLFAGRLSDRIGRKKVLVTGWIIGLPVPVIIIFAPSWEWIIFANGLLGINQGLCWSTTVIMKIDLVGPQQRGLAMGINEAAGYLAVSAAAFGTGYLATTYSLRPQPFIIGIIIALAGLISSIFLVRETQGHAAVEARTHHNGMPPAARLSFAHILLLTSWKDRSLFAISQAGMFNNLNDGMAWGLFPLYFALHGLSIGDIGILSAIYPAVWGIGQLGAGALSDRVGRKPLITLGMIVQAGGIFLFILTSDFWIWALGSTLLGLGTALVYPTLLAAIGDVAHSTWRASAVGVYRLWRDGGYAIGALLAGSLADALGIRWAIGATGGLTLLSGIIVATVMRETLPGRR
>NC_011831.1|WP_012616335.1|1308158_1308689_-|DoxX-family-protein
MTMDLGLLILQVVIGLLMMGHGAQKLFGWFGGQGLRATADWLASMGLRAPRFWALMAGLAEFGGGLLFALGLFHPIGPLAIIAVMITAIALVHWSHGLWISNGGSEYSLVLIVLALVMGLWQPGAYTLDRVLGITLPQPQTFWVGLIIVLLGLAFALFGRQHRAMATPHSAGQATS
>NC_011831.1|WP_012616334.1|1307810_1308104_-|co-chaperone-GroES
MQVRPLHDRVVVKPKPKEEKTKGGIFLPDTASKERPMEGEVIAVGPGRRADDGKIIPMTVKVGQHVLYAKYAGTEFKIDDEEYLILQEKDILGIIEE
>NC_011831.1|WP_012616333.1|1306167_1307805_-|chaperonin-GroEL
MAKQLIFDQQARTALKHGIDTLALAVKTTLGPRGRNVALDKKWGAPTVTHDGVSVAKEIELKDPFANLGVQLLKQAAVKTNDVAGDGTTTATVLAQAIINEGLKLVAAGANPMLLKRGLDKGGQALVARIKEQAITLKTRDEIRNVATISAQDAEVGELLATVMDKIGRDGVVTVEEGKSTHLEHELVEGMQFDRGYISPYFITDSARMEAVLDEPYILITDKKISSIKDLLPILEAVLSSGKKDLLVIAEDVDGEALATLVVNKLRGTLNALAVKAPGFGDRRKAMLQDIAILTGGTVISEEIGRKLESATLQDLGRARRVKADKDNTVIVEGHGDKQAIQARIAQLKQQIETTTSDYDREKLQERVAKLSGGVAVIKVGAPTEPAMKERKARVEDALNATRAAVEEGIVPGGGVALLNAIPALDNVTTQFDEERMALNVLRRALEEPLRQLATNAGEDGSVVVENVRNEQRKHNNNHYGYDVMTGTYVDLMQAGIIDPAKVVRTALENAISVAGMVLTTEALIVEAPEPKKNNNTPPMPDDDF
>NC_011831.1|WP_012616332.1|1304594_1305164_+|elongation-factor-P
MAAGTTSDLRNGIVIRYNNDLYQVVEFQHVAPGNWRAFVRMKLKSLTTGKVIEDRVRAGAEIDIVRIERRPMQYLYREGDSFVFMDNDTFDQIPVSAELVGDAVKFMKENETVDLVYDAEKDQIIGVELPIFVNLKVVETTVAVRGDTATNVTKPATLETGAVIEVPAFINEGDVLKIDTRTGEYITRV
>NC_011831.1|WP_012616331.1|1303282_1304239_-|D-2-hydroxyacid-dehydrogenase
MKLVLPGLLRDELLPRVKTVAPEAIIVWYDQNGEPDAPINDAEVLLRWFFPPEQLAGFIHRMPALRWLHIPRAGVDGLLIPEVIERDIIVTNSAGVHAIPISEFVMLFALSHVKQATHLHQLQAAHQWREHDLQLRELAGSTMLIIGLGQIGQAIATRASAFGMRVWGSRRTPRPTTGVERVVGEGEWRTLLPEADFVVIATPLTPFTRGMFGREELALMKPDAYLINIARGEIIDETALIEALRNRRIAGAGLDVFTQEPLPPDSPFWTLPNVFVTPHISWSSPFIRSRTLDLFITNLHAFIHNEPMINVVDKQAGY
>NC_011831.1|WP_012616330.1|1302031_1303228_-|PLP-dependent-aminotransferase-family-protein
MSSTVDRLTDLFTTRVREIVPPLFGAAGEPVRPLISLAYGLADPALFPRAELIAAATQVLAYEAAESLNYAMSYPGLTDQIVARLQAEGVDAQPEQVLVGYGSGQILALLPEIFVEPGDIVIIEGPSFLGAVKRFVQSGARLITVPVDEHGMNVTVLADVLRRLAAEGRRPKFIYTIPTFHNPTGVTLSLDRRRQLVALAAEYGVPVVEDDAYIDLRFSGEPLPSLAALDQAGWVIRVGTYSKILAPGLRIGWVHARREIIDRLLMVKAEGTTGPFITRVVARYCADGRLERHITELRRHYAAKCHVMVSAVQRHFPAEAHFVRPEGGFFIWVTLPSGVSAQTLLTAARSRGAEFLPGSACFAEPGQGDNAIRLAFSFQSSERIEQGIAAIGAAFGDL
>NC_011831.1|WP_012616329.1|1301445_1301826_-|GxxExxY-protein
MNENILSHHIIAAVIEAHRNLGGPGLLERIYEEALVWELSQAGIPVEQQKYLPIKYKNQTLATPLRIDLLVGGLVIVECKAVNFYNEVFTAQALTYLRLSGLKLALVINFGERMVKDGIHRIVNRL
>NC_011831.1|WP_012616328.1|1299519_1301322_+|NADP-dependent-isocitrate-dehydrogenase
MNPTPKGEAIQIVNGRLQVPDHPIIPFVEGDGTGRDIWRASVRVFDAAVALAYGGKRKIEWLEVLAGEKAFQQTGNWLPDETVETFQKYLVGIKGPLTTPVGGGIRSLNVALRKHLDLYVCQRPVRHFAGVPSPVKHPEKVDMVIFRENTEDVYTGIEYRGGSPEAAKIIEFLQREFPKDFAKIRFGTPEQTDEFRRLIGEEPEGKIEVGIGIKPISRIGTERIMAAAIQYAINYKRKSITIMHKGNIQKFTEGAFRDWAYEYAERAFGDYVYTWAQWERTKAARGEAAANAEQKEALASGKILVKDTIADIIFQQVLTRPDEFDVIVAPNLNGDYLSDALAAQVGGIGIAPGGNINYVTGHAIFEATHGTAPKYADLDKVNPGSVILSGEMMLRYMGWTEAADLIIAGLERTIADKTVTYDFARLMEGAREVKTSEFGSLIIANMEKIAAGQVPHPEETFGPEILRRADGKVYPHDSVGAVMTRAVVAVPAEASLRETAIYMRGRNIHSVIVKPDASGQWGIMTMRDVLKKVVREGRAVDGLTVGDLTTRPLLSVSPETPITECAALMVERNIRRLAVVENGEPIGIISETDIFSYVAE
>NC_011831.1|WP_012616341.1|1312946_1313528_+|sigma-70-family-RNA-polymerase-sigma-factor
MTVPSHHDLITGLQQRDPRMVSGIYETYGPRIYHYLCRRLGDPELARDAHSDVFVRLLERAAHYQDRGLPLTAWLFHLARDQAASVLRRDRRLAPLEDGDSTQNGDPEMLLAHQWDWEHLQQVLAALPDHYRQVLWLRFGDALSLEATAQQLGCTVSAVKALQHRAMTLACKLMREQQEIIPNPRRTYTPPMA
>NC_011831.1|WP_012616342.1|1313595_1314834_-|TIGR02221-family-CRISPR-associated-protein
MKAITFLGARPQETCYVFPDGCEHVAPFFGLALAQYLPDLDFVVFTTELTAQFYHQYFASAQAASIQAVRIPDGRDDAELWRIFQAVVDVIEPNAAVVFDITHGFRSLPFLSFLAAAYLRKVKSIQLKHVFFGNFEMRDQSVTPHRTPVLDLTNFVELLDWMVGADLFVRFGDARDLATLLHTQHNRGKPDPKTASKDEMAAWNNSPIKATAKNLTKVSKALRVVRPADAMQASAQIMQQLPAVEHEIGTLAVPFMPLAQQIIDNFRPIALGKTEQVDPLRILQTELNLVGWYLDRGQVFQAVALAREWLVSWVMVQLGKSDILEKAERQLVEQMLGEAVQAQRGGTGAEIPVDLNAIPSLKEVINLYNQLGDLRNDLMHAGKRKQPQGAQRVEECAKRLYESLQNTCRLPS
>NC_011831.1|WP_012616343.1|1314842_1316939_-|TIGR03986-family-CRISPR-associated-RAMP-protein
MAKHRNKQTPKRGQMHQSGGKANRPEKRDRHQTPVQVVQPSPPTVPWPRAKESTKAREAYRFLNPYNFVRYLPPPDIPETDPDAQLLGRCPPPPHDRYVGLTGRITCTLEAVTPLFIADSHDVQSTTILLADNREVQHKNYRFFQYDGQDAIPATSLRGMIRALFETVTNSPFSVFNGEERLEYRIDPIESKRFKPGIVLSLPDGDQPGVIALCEEATIGAYHEDRNLNVLHGDWRCGETAYAVLSTAKNGVKKVEALAREQDKNRLLKYNKPLVKGWVKITGRTIETKRNERFFYFKEGAPAKAKHVHFDAEREADFNAVLQAQLHERRDDFHSQGQSDRLASGNLVYVELEPDQKTVRNIALAKVARLRYRHSIGDLLPEHLKPSEEYERLDIASRVFGWVRATPAEDRKDRVAYAGRVRFSHAVLIDDKGVYAEPMPLAVLGSPKPTTTLFYLRKKDGEWSEEERKRPGSATTIGYDGPNQLRGRKFYRHHGNSLNRLEYERAGQRRDHQNRTVRGVRVPGNVFQFTIDFHNLAPVELGALLWTLSLGEEKCFFRLGYAKPLGFGSVKLTVDQVDLLELSTRYCSLQQSGWRRAEVGKRSEWVAAFAQAMQRCYGQSLDRLPHITDLLALLRDPVPPLPIHYPRTDVHPDPEGKNFEWFVANKVKSNKMADAGPNLVLEEPGDEQGLPLLTKEKE
>NC_011831.1|WP_012616346.1|1317731_1319828_-|TIGR03986-family-CRISPR-associated-RAMP-protein
MSKSKTQRRSISSGTSSAQGYRFLNPYNFVRTLETRNAHIARLLGRCAPPPHDRYVGLTGRIYCRLTATTPIFVADGENVREEHVNGKIHRHYRFFRDPENKVAIPGTSLRGAIRAIFEAATNSCFAHFAGDKRLSYHLLPELALQLVPARVRKINTRWELELLPGTTTITPGQRPAGPQYAAWVHVYDPLQKSKTVAQSLSKPYAQRQKLSLTGFAHGELCHAIIERMIHPRRNFKFWNVVHLAKSAQSLPEPGANQLKVSGYLCITNQNIENKHDERLFFTNQKLSPLDLPDTVRQKYEELIADYQERHRDEVRKRRDPNRPQGTEPAFSRFIVEGRQKLTDGDLVYAMLDKVGNSGYKVRFIVPVSVPRVGFERTIGDLLYPSDLKKCATYDALCPACRVFGWVWGDETAVNPPELSVRTAYAGRVSFSHAVLTKDGGTFDETLAILSTPKPTTYRFYLRPRTGKPQNGQDDRQVDYNNQNQILRGRKIYRHHGARLNPQEYRSVNGVKSDQNRTVRGVQQAGSIFEFTVDFENLAPLELGALLWSLQIEGWHHRIGYAKPLGFGSAKIDIVKISLLHPEARYASFTSSGWHDQDQQKIDAWIKEFKQAMKLRFGAAFEMLANICDLKALLADTPPLPVHYPRPTRQPQPDGKQYEWFVGNKRGGNNPGPRIALPLAEDDVAGLPLIDKNGNIIP
>NC_011831.1|WP_012616347.1|1319824_1320415_-|hypothetical-protein
MSDESNDFFTQLYEKMQKANLSNSDRPAILGGECMPDQLQAFLTAWQGHWQAMPYRIWEHVSHIEFADLPTQPEFLERAEIFGELGHLSLRRDGNRWLWHYIGTSVSFTSFGARDFWKEHPDCQLRRYAESVMLWGERKDHQPRWFEDRVAAAILAYPLNATGRVYLHFWRYTEQGRTAFVWYRALSDRPDKVETQ
>NC_011831.1|WP_012616348.1|1320411_1322205_-|hypothetical-protein
MKFRAITANLTLRTALHVGTGSDTETTDDLLRRDVRGRLLIPGTAIAGVLRSIATRLAPRFGESPCQVIDNQSSNDACQCLVCQLFGDVNPREDSDTATATRVLVYDAVLDTIPSLTIRDGVGIDRVTGAAARRERIKFDYEVLPAGTVFTLRLEIDPKLPDVPKLLPLLAATLAEWEQGRGAIGGRVNRGLGAFTLNEVQWIERDLNQAGVLIEFLHRGPPWHTTDGDRTWLTNQVQQVRAWVEPYQGNDPVARSWVLAEFTLAATGPFLTNDVAQAGRSGFDHAPVFAAYEQGAKPVLPGSSLRGALRSQAERIARTLATFSAWDNGKDMKSRKTSFLATCPACNPLTTKTDDPVASCNSFIKARPKVERDTLEQKGAEEKLCLACRLFGSPWNGSRLRVEDAPFVGDKVTLKVLDFLAIDRFTGGGRDTAKFDAVVLWQPKFRVRLFLENPEPWELGWLALVLRDLHDGLITIGFGAAKGFGQCRIEDGAVTLGIIHESDFPLSEPNNQEPAAQQAITAKQQLLQSKGGMSGVYRTLMLDPATENDWRTLVESWIRAFNVTVKEYKHAFGLKKDSYFDKINGTWLPDLYPARVS
>NC_011831.1|WP_012616349.1|1322208_1324545_-|hypothetical-protein
MSIRLEFEIEFKSDYHIGAGYGLGLQVDSALLRDADGVPVIRGTVLAGLLRESLTNLLTLQVFASNHHVVDTIFGSPARQKRWRISSARPAGMMTPLVPSDVWSAGETAAQITTRVRVNPRTRRAEKNKLFTREEGDGSLHFRFVAECQNDDADAQREAEWLVAAARMLRNLGAGKRRGYGECEIHLVDRAQETAILDRLAKRLRDEQVAEPALPAGAINISPLQLPPYPNHHTYRLRVLMRLDEPLLIARRVEAGNQYETLDIIPGSVLRGALAWRAAKHLGKQLQGSVYQDFVDLFYRDTVRFSMLTPVEVFQKANGYPTIIAPRDLLTCELHPGHADPSRDKGHGVWSLFDPSAPEECPRCKRTGQLTSLEGFISLVSGMPRSKHKPSTMVEMHIRIDPDSGRVRTGDLYGYVALEPGQYFVGEVTCTDQTVWDLLQSMANLQPNGAVNELHLGKATQRGYGKVSAVFQKIDEPLFSLQSLTGRLTSTEHVTMLLLSDAIIVDPWGRFWRGFDTAWLKRELQLPNGAAVSIDCNQNGEALAFSAVRTVDSFNATLGLPRARDIAIVAGSSVRLSFKGIPLDDLRQRLGEVEAQGIGLRRNEGFGRVAFNHPVYRQLQGITSPMLDLTPLQMASAEQSPPFVAVLAFTREWEEKLEAEATSFACFNDGRFETIARLLHVSQHTSVDAIKQDLQRSGNAENLLGKSLSGRDKPNFFTADGKRGMDVIDKLLDALVDKLKSHKLDHNPLAWRIGLQIGLQMLAARIAAPARQKAEERR
>NC_011831.1|WP_012616350.1|1324541_1326170_-|hypothetical-protein
MPYLLAAEADKIQDFIFRSSRLREVVGASQLLTRFCRSVEDTLAKQYNGQVVVNDGGSFRVIFDDRNDAVAFGADLAERYRLALGGSLTVAEPVAMNSDFRTANDEAGTKLRWAKSHRQGVVAEVHMPYVAFCESCGVGLAERRDRLAGRNDSRHRYLCATCQIKATERDRGLREFLGGVYDPYAKKAAIPAHIEPDWPEDADAIAVFDLSKRNYVAYLVADGNGMGQLFGNCDQGQLQNLSQGLSTVLSESLAVPMIEFRKQVPAQATMMPMLPLILGGDDLFALVPASYALDIARRFCLEWEERMQMLVNKIGLHNVPRPTIAAAVVICKRTYPYALAHRRAEALLEDAKRQSKLLAAKTNGHLSAVNFEVILGNRLAGMAEADGDQVIRRSLRPYWVAEHDLSKDALLRGIDLKHLLAQRYALKDLPRKRLAELRRCFAEVQTDIPVQQRTQNLERWTQHRLEWILERLSAASRSAVVDALAVLGKPKNDGNGAHYWRSITRDNRDVVVHGMLDLLEVWEFAQELSHNPDDYEPQEDEA
>NC_011831.1|WP_012616351.1|1326188_1327922_-|hypothetical-protein
MGGKCDVDNLREQTRKYWNKRDYEDYIKQLLGCELKIAAQEPDRLRGVDRPVHTLALTVGESFEPLLQVVCVLKPQRVVLVLNTSYSGMPGVDHGTLLKQYMLSLKQAPLPEQFRPDLADNSFDLIELPKDTPTHVFRTLCKAFQKQEAQPPAGYTNVVDITGAKKSMVVGAFLYAAHSGLPITYVDFDEYDRDWHRPYGFTCRIGTVANPYAAFHLRDWEQVRRLYESYSFRNALVLLGTKHSPDRQGSGILGAMSQTLDVTADGESLFEPCDLEKVQRLAELLRMYEEWENGNYAVAKQMRDRFNPPLPDDVVPWSIDVLGPIWPNVSAATTATAAAQQLLDEHLKLKHGDPAPTHSLFARPEPLLAYVSDELAKNERLITKNEDYRSAYLRAAALDEFLLKARLCIAWLKDSLVLKDNSGSTSKVSNLSNADQIKGFKLLADHSGARAMRGVLVGGDPLDLRQIGKVEIASGCPSLSKYWNGKALDFSHKNYQGFTKLRGEAIHTHLHLPRSVAEAALEWVKAAVDEFIQNWLEYFYPGTVAVATGRKERVAAPSWSRLVEVCDLTFLPPGLRQ
>NC_011831.1|WP_157044828.1|1328075_1328942_-|histidine-kinase
MTTSHSTTLIATLGGQPQVITFALDALLAQGEAINEVYILHLSLANPRIRQAWQRLQAEFVDDYYAGQRCRLRHVPITRNGIELDDIRTEADADAAFATIRDLITNLKTEGRRLHLCISGGRRMLALLVTSVISIYGDFSDRLWHMHTPEATLARVKDGAQMHVSPADGVRLIAVPLKPWGAFFPGLRVLTQQTSLPSYLRQLTAVDDPRCRQVWDRLSPRERDVLRAFAQGFRPDQVAERLSISLSTVNTHKTAILAECRNAWELSNSEPLDYRFIRDHFAMFIEGV

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Click the colored protein region to show detailed information

Crispr_ID: NC_011831_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_10

1352342-1352455

Orphan

Consensus_repeat	Method
GTAGCATATGACGCAGAAGTCGGCAAGGCTCAAGCGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_10

>merge|NC_011831|10|1352342-1352455|CRISPRCasFinder
GTAGCATATGACGCAGAAGTCGGCAAGGCTCAAGCGCTGTAATCAGCTCTTTGGCAGTTCAACCGTAAGACAAGTGTAGCATATGACACAGAAGTCGGCAAGGCTCAAGCGCTG

>NC_011831|10|8|1352342-1352455|CRISPRCasFinder
GTAGCATATGACGCAGAAGTCGGCAAGGCTCAAGCGCTG	TAATCAGCTCTTTGGCAGTTCAACCGTAAGACAAGT
GTAGCATATGACACAGAAGTCGGCAAGGCTCAAGCGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012616375.1\|1358781_1359294_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616378.1\|1361640_1362564_+\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|235821
NC_011831.1\|WP_157044830.1\|1343511_1343868_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369938
NC_011831.1\|WP_012616363.1\|1342550_1343312_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NC_011831.1\|WP_012616367.1\|1349402_1349990_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_085953504.1\|1359319_1360864_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NC_011831.1\|WP_012616366.1\|1346597_1349390_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223510
NC_011831.1\|WP_012616377.1\|1360854_1361577_-\|LppX_LprAFG-lipoprotein	unknown	unknown	gnl\|CDD\|369238
NC_011831.1\|WP_085953538.1\|1356608_1357745_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|274368
NC_011831.1\|WP_012616372.1\|1354607_1355606_+\|DNA-adenine-methylase	unknown	unknown	gnl\|CDD\|223415
NC_011831.1\|WP_083768954.1\|1351794_1351986_+\|addiction-module-toxin,-HicA-family	unknown	unknown	gnl\|CDD\|224638
NC_011831.1\|WP_012616364.1\|1344670_1346035_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376343
NC_011831.1\|WP_012616365.1\|1346044_1346584_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370546
NC_011831.1\|WP_012616381.1\|1363934_1364591_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|181382
NC_011831.1\|WP_012616370.1\|1351109_1351334_+\|prevent-host-death-protein	unknown	unknown	gnl\|CDD\|226603
NC_011831.1\|WP_012616380.1\|1362905_1363754_-\|metallophosphoesterase-family-protein	unknown	unknown	gnl\|CDD\|378975
NC_011831.1\|WP_041470378.1\|1362567_1362909_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616362.1\|1341773_1342454_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NC_011831.1\|WP_012616368.1\|1349999_1350410_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371210
NC_011831.1\|WP_083768871.1\|1357897_1358653_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012616378.1\|1361640_1362564_+\|2-dehydropantoate-2-reductase	gnl\|CDD\|235821	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed.	1.84057e-83
NC_011831.1\|WP_012616381.1\|1363934_1364591_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|181382	PRK08317, PRK08317, hypothetical protein; Provisional.	2.28255e-17
NC_011831.1\|WP_157044830.1\|1343511_1343868_+\|hypothetical-protein	gnl\|CDD\|369938	pfam08543, Phos_pyr_kin, Phosphomethylpyrimidine kinase. This enzyme EC:2.7.4.7 is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes.	1.7821e-08
NC_011831.1\|WP_083768871.1\|1357897_1358653_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.03138e-96
NC_011831.1\|WP_012616363.1\|1342550_1343312_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	5.48333e-23
NC_011831.1\|WP_085953504.1\|1359319_1360864_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.10528e-49
NC_011831.1\|WP_012616366.1\|1346597_1349390_+\|ATP-binding-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	1.3097e-07
NC_011831.1\|WP_012616377.1\|1360854_1361577_-\|LppX_LprAFG-lipoprotein	gnl\|CDD\|369238	pfam07161, LppX_LprAFG, LppX_LprAFG lipoprotein. This entry consists of several lipoproteins mainly from Mycobacterium species, collectively known as the LppX_ LprAFG family. Proteins in this entry include LprG, LppX, LprF and lprA.	5.10726e-48
NC_011831.1\|WP_085953538.1\|1356608_1357745_-\|PAS-domain-containing-protein	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	7.49029e-76
NC_011831.1\|WP_012616372.1\|1354607_1355606_+\|DNA-adenine-methylase	gnl\|CDD\|223415	COG0338, Dam, Site-specific DNA methylase [DNA replication, recombination, and repair].	3.99207e-13
NC_011831.1\|WP_083768954.1\|1351794_1351986_+\|addiction-module-toxin,-HicA-family	gnl\|CDD\|224638	COG1724, COG1724, Predicted RNA binding protein (dsRBD-like fold), HicA family [General function prediction only].	2.83101e-11
NC_011831.1\|WP_012616364.1\|1344670_1346035_+\|hypothetical-protein	gnl\|CDD\|376343	pfam00499, Oxidored_q3, NADH-ubiquinone/plastoquinone oxidoreductase chain 6.	0.00164174
NC_011831.1\|WP_012616365.1\|1346044_1346584_+\|hypothetical-protein	gnl\|CDD\|370546	pfam09531, Ndc1_Nup, Nucleoporin protein Ndc1-Nup. Ndc1 is a nucleoporin protein that is a component of the Nuclear Pore Complex, and, in fungi, also of the Spindle Pole Body. It consists of six transmembrane segments, three lumenal loops, both concentrated at the N-terminus and cytoplasmic domains largely at the C-terminus, all of which are well conserved.	0.00341833
NC_011831.1\|WP_012616370.1\|1351109_1351334_+\|prevent-host-death-protein	gnl\|CDD\|226603	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning].	1.48101e-08
NC_011831.1\|WP_012616380.1\|1362905_1363754_-\|metallophosphoesterase-family-protein	gnl\|CDD\|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	6.62198e-15
NC_011831.1\|WP_012616362.1\|1341773_1342454_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	2.32026e-48
NC_011831.1\|WP_012616368.1\|1349999_1350410_+\|hypothetical-protein	gnl\|CDD\|371210	pfam10722, YbjN, Putative bacterial sensory transduction regulator. YbjN is a putative sensory transduction regulator protein found in Proteobacteria. As it is a multi-copy suppressor of the coenzyme A-associated temperature sensitivity in temperature-sensitive mutant strains of Escherichia coli the suggestion is that it both helps CoA-A1 and possibly works as a general stabilizer for some other unstable proteins. This family was expanded to subsume other related families: DUF1790, DUF1821 and DUF2596.	0.00020619

>NC_011831.1|WP_083768954.1|1351794_1351986_+|addiction-module-toxin,-HicA-family
MVAELRKAGSEVIRVKGSYHFLRHLDGQRTVGPVHRGETIGSGLMSKILRDCEMSRDELEKLL
>NC_011831.1|WP_012616370.1|1351109_1351334_+|prevent-host-death-protein
MLQVNLEEAKGRLPELVNAVLKGETVLIVTDLQAIVQLVPVISSMRRQFGSAKGLIVMADTFDAPLPDFNPYMP
>NC_011831.1|WP_012616368.1|1349999_1350410_+|hypothetical-protein
MDINIKETLTSLKIDFIELENDVYGLSIASTDESSRSFPVVLFQWTAGDEQEYIRLIIAPFIERPNEGFAFDLFERVLAINEQLPRAKFLLDSDGDLGLALDIDIEEWRSENLARALDVLGSFADYCYEELESFGK
>NC_011831.1|WP_012616367.1|1349402_1349990_+|hypothetical-protein
MISGRVNSTRNNASRSVRSTNIKSRFGPLRVSTPSSSTRISTPRIPRVSSASKKKATKFAKTMKAGRTFQKRVNKELMKRHDKVYSEVYVQGKKSHNARIDHLVDSKKLQPYSTKNSRWHKVQATTWKKYVREAAKYPDRTILTNKPGYTHLKGRKVGKNPVLVMPKRYLKKDTQARLQEIKTYASKRRVRIELQ
>NC_011831.1|WP_012616366.1|1346597_1349390_+|ATP-binding-protein
MHLREPYIFTINDSVGAKGVHAIFAARVPFIPSFMTSDFTRSLSGGGKSRLELITERQVRFINDLLNTRNIGVANEKNSANITIDLRYIARPNADKKRFSSNIDVVFLGKAFHEDEATAKRLCHQLWRKFIAHFPFEDPFNYPLEAVSLGGDSREDIDRCMETMRGLVYPIPFNQLDCSNNPLLEIRKYEDFDPELSPGAIEGYFPHRFMPTFDTSALGRFLETLVQQQQLCVASICLRPTQLTRDEEIFLMDLLAKNETYITKLTGRKKLHFEERFQDVRDTFWPIINRRYHLFQIKIQVLGEKYPPTDVLEALGSELLGNTYKQEPRLWAKEQPATINELKVALYNFECLEYKSWGKRILSDSRAIRLRQLVTPTEAAGAFRLPIPPESGYLPGIIVRDEPFVIPQSTASSSVESISLGEIFHHGQATGENFFVPVRDLAKHVLIAGATGSGKTNTCLHLLSQLYADYKVPFLVMYPIDKSDYRLLIGDPAIKDSLLIYTVGDETTSPFRFNPFYVADKILLKTHISLLMRCFSAAFSMWDPLPAVYRAALRQVYRANGWDLDHDTGETGRMRQAKTPCMSQFYEVLLSVTEQMTAGYDEEAKGRVRQSAEIRLHDLLLNAGTVVNTEQPAPIADILRYPTVMELGRVGSTQDTALIMGFLIVLLIEEIQSNYRKISTEERQKPLRHVLLIEEAHRLMSAVQNASEDLANPQAKGGEDFANILAEVRGFGQGIFIAEQIPTQLVNGALGNTNLKIMHRLEDQDSFKLFCEILNLNERQKEYVRSLEPGQVIVRGRDSRPVFVKVGNYLDRFQTSDDYPLVDDSDEAVKKLMSRANLSVRIPTAMQWYPENAISTSTSADILLTDDSQPFLETVQQAVESENWERVRRVISGWLNPANSQKIKVKLCEEIVRKLNYTGTQAEIILSLFK
>NC_011831.1|WP_012616365.1|1346044_1346584_+|hypothetical-protein
MNNPIDIMILIVVGLATFIGFFKSPSSIVIEMILLYVAVVLTFQYLVGISEIISGILSVNERVIYILGTALILGIYYGLIKTYNQIYKPKPKNESGNRVWVSRIISGSLALIHISFLLSALFTMIYPLAFECRESLTDIPYELCIAADILEHSEIMNSNATIEMLDVYNAIIQFWIPPR
>NC_011831.1|WP_012616364.1|1344670_1346035_+|hypothetical-protein
MKTTKKFFGIFPKILFFPVLFVIMALPQLLSKSPSPFFRSIKQLLESQSIFTILLIVFGILLLIVLIAVVAVLTDDEWKENMKRKVDTTEAVKRERGGNGIYTDPIPFIWIFSVLTYVYVETGKECAIVDGERIIETKQWITKSFFHDAVIRYVLLEPPPLIMTIENVRTQDDLYLTADISVTYRVRDPLAIIKKADPLKILQEHVKSQCTNLIGRLDYYTIADKKAKYENEICAAIQRESILPLFEITSVHLEMKLAVDPRNVEKIEELKRQQKEKDLLVEDRQKERDHAREIDKAKIGAGLTIIKETAEIAKGRSESTKEYIDSLGPRAILSMIGTPYHNLESAPNLPMLTEATERSRYEREKPELDNLQENGVIKNYESRWSKDGNFCGVVIEVDDGQIHILSPSYPDIAPTIQFISRSGQTYEWPIEKWNANMTIVHVITIALSKIKLLQ
>NC_011831.1|WP_157044830.1|1343511_1343868_+|hypothetical-protein
MDVLDDGDTNLTVRTTRFPTHHTHGTGCTYATATTVPQPAGAGHTPGPLVFAGGPSLACGPSVRGRGRWRTAGARSGVRSMGARLIIGGSGAVQWQGENAKRLHAPHASNTTPPYRST
>NC_011831.1|WP_012616363.1|1342550_1343312_+|sulfite-exporter-TauE/SafE-family-protein
MELFDLALIFTAALLAGALNAIAGGGSFFSFPALLVAGVSPIVANATNALALWPGTLASVGAYRRELSGQRNDIWLFSGLSLIGGLLGALLLLATDEQRFTALIPYLLLFATLIFTFSPQITTVAQRLVGHGSRQQRLLVTVVYFAIAIYGGFFGAGLGILTLAALALLGHDNIHRMNALKTLQAALVNGIAVATFVATGLIAWLPALIMTIGAIAGGYGGAAIARRIDARRVRTVVVWISIGLTVWFFVRAS
>NC_011831.1|WP_012616362.1|1341773_1342454_+|FadR-family-transcriptional-regulator
MTITRRRLVEQVIEHLRQQIATGTYPIGSRLPPEPQLMAQIGVGRSTVREAIRALAHEGLLEVRQGDGTYVRALATTEPLATRLRQAKVQEVHEVRRALELEVVALAAERRNDEDLAVIRQWLAVRSAALANGDIATALSADIELHCAIARATHNPTLSDLYRIFAVTLRDALGVLWDAAAPSSTDHSHADLVAAIAAGDAETAVAITRTILARHEATIHMHTATG
>NC_011831.1|WP_012616372.1|1354607_1355606_+|DNA-adenine-methylase
MSTQRQLPLFSEEMALPRPVNVASVPQRSPFRYPGGKTWFVPTFRRWVASLKRKPLILVEPFAGGGIISLTALFENLVEKAVMVELDDEVAAVWETIVNGDAVWLANQILTFTMTREAVEAELQKTPTTIREKAFQTILKNRTLHGGILAEGSRFIRYGENGKGIGSRWYPKTLAQRLINLNTVAHRIDFRCDDGLNVMMEFAHREDVIYFIDPPYTVGGKKAGKRLYKHHQLDHEHLFTICESLVGNFLMTYDEADEVKEMARKHRFQMRLIPMKNTHHATMRELVIGRDVSWLDELPAIHEARVEYRGTTSEQETSSPRTPADRPSCAQS
>NC_011831.1|WP_085953538.1|1356608_1357745_-|PAS-domain-containing-protein
MTLTLSSSLPPDDPSLQLGLPNCQPLFVALVQTIDTGVIVVNRACQIVFHNDTAIHLLAGQPDMRGSGLITLVRDHQADRLAHDAMTDGEQRELTIRPLATGRTLHLQFVPLYTASRDIVGALITIRDLTQISMLERARRDLVANVSHELRTPLASLKLLVETLQSAPPPDIAARMLEQMAQEIDAVTQLVDELHELSRLESGRVSLKLEPLAVWPVIERAIERIRPQAERKHHTICTEPVSDLPPALMDGDRIGQVLLNLLHNAVKFTPEGGTITVAAQVLHIAVDDPPSRTDRPPHPAGTWILISVRDTGIGISSRDIRRIFERFYKVDRARTRHTGGTGLGLAIAKHLVEGHGGRIWASSQEGRGSTFWFTLPVA
>NC_011831.1|WP_083768871.1|1357897_1358653_-|response-regulator-transcription-factor
MTAGYVPAVFMCGVDMATVLIVEDETTLAETLRYNLEREGYAVIIAGDGVQGLDRARRDQPDLVVLDIMLPRLDGFSVCRILRQESDVPIIMLTARQDEVDRIAGLELGADDYISKPFSLGEFLARVRAILRRSERQPHSIVREVLEAGSIRVDASSRRAWRDGQELNLPQKEFDLLTCLMRNRGIALTRDLLLERVWGQDFIGDSRTVDVHIRWLREKIEPDPSKPTYIQTVRGVGYRFEPPVDGTTISQ
>NC_011831.1|WP_012616375.1|1358781_1359294_-|hypothetical-protein
MHDEEIQRLIAQRLPAEVRAGPAEIRRYSDEIVIILPIARPLDDIPLLREQTRRDRMRVAREIERHLGVPVAWGMRSADHEVLFTTRTVPVMTRLGRAERELLDLLVAVGVADTRSSALAYIARAFAYEHREWLNEVRLAVGELARVRARLQLQPRSGPPVIPPEVTDGA
>NC_011831.1|WP_085953504.1|1359319_1360864_-|MFS-transporter
MPMKNPALTNVETRTVDPRLTLALVCLAIFIGAVDLTVISAALPKVMIDLRLALDTELNRASWAVSGYLLAYTVSITFMGRLSDLFGRRKVYFLCLITFLVGSAVVAAAPNLTILIVGRVIQALGAGAMVPVSMALVGDLFSVGQRAAALGVIGAVDTAGWMVGHLYGGVLMRLFDDWRLLFWLNLPIGAVALGLTWYALRNVPTPPRVGSFDWPGTVLLSAGLVVLNVGLAAGSELGATDFYGERLGPPPYAGPLVGLALMLFALFVWVERRSADPLIGLELFTRRDTAMACIINVMVGFGLAIAITNVPLYINTRLLLYHPTDSDILRIAAWDAGWMLSALTLTMAVAALPGGLLTARFGARLPTILGLGLALVGYLLMTFWGPEATYLRMGLELALTGIGLGLVIAPVADTVVAAAGGDQRGAASALVIALRLVGMTVGVALLTLWGVHRQDVLRRAGADNPLAMTDPARFLMEIAANVIGETFLFGAAACVIGLVAGWLMRRWVVTHHTG
>NC_011831.1|WP_012616377.1|1360854_1361577_-|LppX_LprAFG-lipoprotein
MKQVWRWLIIGWVVWLAGCSSSAALPTPTPTPDPRTLAAAIGRATQNSQSAHFRITLSGKPVALDSGGVTVLNSIEGDLRRPDAVLSILNITLGNAIGEIRTISLAGKQYTTNPITRQWMCLQSGSTFDPATLFAPESGIEALLANKLADVTLVGIEDLNGRPHYHLRGTLPAEPLRAISLNLLGVGPVTADMWADQATMRASRVVLVDTATDATNPSTWTLEFSDYDKTVDVREPIQCP
>NC_011831.1|WP_012616378.1|1361640_1362564_+|2-dehydropantoate-2-reductase
MNIAIIGAGALGSVIGFHLAAVSNVTLIDPWAEHVHAINDGGLRCLIDHEERIVTLSATTDPSGVKPVEVALITVKAAQTAWAAEVAAHVLTPDGVAYTLQNGLGNAEILSVRLGKQHVGQAVTTLGATLLGPGYVRLAGRGPTTFGATPVLHLAYAIADKFRASGLPAAVSTDLIGLVWGKLIVNVGINALTAILRVPNGALATTPAARSLVRKVVEEAVAVAQAAGVTLSLTDPVAETLAVAQATAVNYSSMLQDVLRGAPTEIDTINGAIVREGGRLGVPTPCNAMLCELVAALEETAPLRVQA
>NC_011831.1|WP_041470378.1|1362567_1362909_-|hypothetical-protein
MKGNPVLQIVRYDRQPEPRAEDIAADLMGWLAREGYTIFSTLVVQALGQAMTIDVYHRDGPDPYVLHHPAFPLGGLRETIYLLPDGDAMDELLLRAQQMVAALMTIIARRQMS
>NC_011831.1|WP_012616380.1|1362905_1363754_-|metallophosphoesterase-family-protein
MKIAVLADIHANLAAFQAVIDDIERWNPDIVIIAGDIINRGPQPRACLELALRMRAERGWHVLRGNHEGYILSYERDVAAGCPPKGGKQALLGPIIWTHQAVADMLPQIEALPTNQVVTTRDGLVMAYHASIHHDRDGLLPGHTQLELHAKIDPRAAVFCTAHTHMPFVRRVGETLVVNVGSVGLPFDGDWRAAYARLMVCHTGWQAQIVRLPYDRAATLRAARDLMVPNAGPIAHIMLRELETAHSLLFDFVPVYNEPVIAGVIGLEEAVKRFLSAVERAA
>NC_011831.1|WP_012616381.1|1363934_1364591_-|methyltransferase-domain-containing-protein
MIALLHEPYLPLIRHALLAVTPRGVARALDIGCGDGTKTHWLRECCTPDGLIIGLERDINVLGSAQGISQIVGDAINLPFADQTIDVIWCIAALALFSQPQQALAEMRRVLHPRGTLILLTAGEYWVRLRKHPLTVVQTLPPDIPLSPADGLGEEWARLLRTAGFTQPQVRAYLLNGVAPAQAALLDSADLAAYINHTPVVSPIAEPEVHPVLFIVKA

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Click the colored protein region to show detailed information

Crispr_ID: NC_011831_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_11

1558382-1558496

Orphan

Consensus_repeat	Method
GGCGCGAAGGGCGCGAAGATAAGCAACGTTTTTTGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_11

>merge|NC_011831|11|1558382-1558496|CRISPRCasFinder
GGCGCGAAGGGCGCGAAGATAAGCAACGTTTTTTGAGTCCGCATAACTTTAATCGTTTCGATCAGGTCATTGATTGACGGCGCGAAGGGCGCGAAGATAAGCAACGTTTTTTGAG

>NC_011831|11|9|1558382-1558496|CRISPRCasFinder
GGCGCGAAGGGCGCGAAGATAAGCAACGTTTTTTGAG	TCCGCATAACTTTAATCGTTTCGATCAGGTCATTGATTGAC
GGCGCGAAGGGCGCGAAGATAAGCAACGTTTTTTGAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_041470945.1\|1551917_1553309_-\|cobyrinate-a,c-diamide-synthase	unknown	unknown	gnl\|CDD\|234896
NC_011831.1\|WP_012616538.1\|1557600_1558323_-\|precorrin-2-C(20)-methyltransferase	unknown	unknown	gnl\|CDD\|381172
NC_011831.1\|WP_012616545.1\|1564831_1565575_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NC_011831.1\|WP_012616533.1\|1551264_1551819_-\|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase	unknown	unknown	gnl\|CDD\|376754
NC_011831.1\|WP_012616536.1\|1554415_1556752_-\|precorrin-3B-C(17)-methyltransferase	unknown	unknown	gnl\|CDD\|381173
NC_011831.1\|WP_012616542.1\|1561839_1562364_-\|flavodoxin	unknown	unknown	gnl\|CDD\|179647
NC_011831.1\|WP_012616546.1\|1565571_1566345_-\|cobalt-ECF-transporter-T-component-CbiQ	unknown	unknown	gnl\|CDD\|185382
NC_011831.1\|WP_012616544.1\|1563754_1564696_-\|cobalamin-biosynthesis-protein-CobD	unknown	unknown	gnl\|CDD\|377002
NC_011831.1\|WP_012616530.1\|1547566_1548688_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NC_011831.1\|WP_012616537.1\|1556800_1557604_-\|precorrin-4-C(11)-methyltransferase	unknown	unknown	gnl\|CDD\|381168
NC_011831.1\|WP_012616541.1\|1561183_1561843_-\|precorrin-8X-methylmutase	unknown	unknown	gnl\|CDD\|376825
NC_011831.1\|WP_012616535.1\|1553308_1554091_-\|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|381169
NC_011831.1\|WP_012616547.1\|1566348_1566648_-\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|179494
NC_011831.1\|WP_012616531.1\|1548676_1550152_-\|cobyric-acid-synthase	unknown	unknown	gnl\|CDD\|234838
NC_011831.1\|WP_012616529.1\|1546136_1547531_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NC_011831.1\|WP_012616548.1\|1566644_1567385_-\|energy-coupling-factor-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181384
NC_011831.1\|WP_012616539.1\|1558582_1559788_-\|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase	unknown	unknown	gnl\|CDD\|381171
NC_011831.1\|WP_012616532.1\|1550188_1551286_-\|histidinol-phosphate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223157
NC_011831.1\|WP_012616540.1\|1559784_1561020_-\|cobalt-precorrin-5B-(C(1))-methyltransferase	unknown	unknown	gnl\|CDD\|234615
NC_011831.1\|WP_012616543.1\|1562360_1563758_-\|sirohydrochlorin-chelatase	unknown	unknown	gnl\|CDD\|225049

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_041470945.1\|1551917_1553309_-\|cobyrinate-a,c-diamide-synthase	gnl\|CDD\|234896	PRK01077, PRK01077, cobyrinate a,c-diamide synthase.	0
NC_011831.1\|WP_012616538.1\|1557600_1558323_-\|precorrin-2-C(20)-methyltransferase	gnl\|CDD\|381172	cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methyltransferase, also named CobI or CbiL. Precorrin-2 C20-methyltransferase (also known as S-adenosyl-L-methionine--precorrin-2 methyltransferase) participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. Precorrin-2 C20-methyltransferase catalyzes methylation at the C-20 position of a cyclic tetrapyrrole ring of precorrin-2 using S-adenosylmethionine as a methyl group source to produce precorrin-3A. In the anaerobic pathway, cobalt is inserted into precorrin-2 by CbiK to generate cobalt-precorrin-2, which is the substrate for CbiL, a C20 methyltransferase. In Clostridium difficile, CbiK and CbiL are fused into a bifunctional enzyme. In the aerobic pathway, the precorrin-2 C20-methyltransferase is named CobI. This family includes CbiL and CobI precorrin-2 C20-methyltransferases, both as stand-alone enzymes and when CbiL forms part of a bifunctional enzyme.	6.22579e-95
NC_011831.1\|WP_012616545.1\|1564831_1565575_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	2.88973e-86
NC_011831.1\|WP_012616533.1\|1551264_1551819_-\|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase	gnl\|CDD\|376754	pfam02283, CobU, Cobinamide kinase / cobinamide phosphate guanyltransferase. This family is composed of a group of bifunctional cobalamin biosynthesis enzymes which display cobinamide kinase and cobinamide phosphate guanyltransferase activity. The crystal structure of the enzyme reveals the molecule to be a trimer with a propeller-like shape.	3.48978e-81
NC_011831.1\|WP_012616536.1\|1554415_1556752_-\|precorrin-3B-C(17)-methyltransferase	gnl\|CDD\|381173	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH). Precorrin-3B C(17)-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model includes CobJ of the aerobic pathway and CbiH of the anaerobic pathway, both as stand-alone enzymes and when CobJ or CbiH form part of bifunctional enzymes, such as in Mycobacterium tuberculosis CobIJ where CobJ fuses with a precorrin-2 C(20)-methyltransferase domain, or Bacillus megaterium CbiH60, where CbiH is fused to a nitrite and sulfite reductase-like domain. In the aerobic pathway, once CobG has generated precorrin-3b, CobJ catalyzes the methylation of precorrin-3b at C-17 to form precorrin-4 (the extruded methylated C-20 fragment is left attached as an acyl group at C-1). In the corresponding anaerobic pathway, CbiH carries out this ring contraction, using cobalt-precorrin-3b as a substrate to generate a tetramethylated delta-lactone.	4.24567e-123
NC_011831.1\|WP_012616542.1\|1561839_1562364_-\|flavodoxin	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	3.16837e-33
NC_011831.1\|WP_012616546.1\|1565571_1566345_-\|cobalt-ECF-transporter-T-component-CbiQ	gnl\|CDD\|185382	PRK15485, PRK15485, energy-coupling factor ABC transporter transmembrane protein.	3.41278e-30
NC_011831.1\|WP_012616544.1\|1563754_1564696_-\|cobalamin-biosynthesis-protein-CobD	gnl\|CDD\|377002	pfam03186, CobD_Cbib, CobD/Cbib protein. This family includes CobD proteins from a number of bacteria, in Salmonella this protein is called Cbib. Salmonella CobD is a different protein. This protein is involved in cobalamin biosynthesis and is probably an enzyme responsible for the conversion of adenosylcobyric acid to adenosylcobinamide or adenosylcobinamide phosphate.	4.42083e-87
NC_011831.1\|WP_012616530.1\|1547566_1548688_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.00172329
NC_011831.1\|WP_012616537.1\|1556800_1557604_-\|precorrin-4-C(11)-methyltransferase	gnl\|CDD\|381168	cd11641, Precorrin-4_C11-MT, Precorrin-4 C11-methyltransferase (CbiF/CobM). Precorrin-4 C11-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. In the aerobic pathway, CobM catalyzes the methylation of precorrin-4 at C-11 to yield precorrin-5. In the anaerobic pathway, CibF catalyzes the methylation of cobalt-precorrin-4 to cobalt-precorrin-5. Both CibF and CobM, which are homologous, are included in this model. There are about 30 enzymes involved in vitamin B12 synthetic pathway. The enzymes involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Most of the enzymes are shared in both pathways and several of these enzymes are pathway-specific.	2.82249e-124
NC_011831.1\|WP_012616541.1\|1561183_1561843_-\|precorrin-8X-methylmutase	gnl\|CDD\|376825	pfam02570, CbiC, Precorrin-8X methylmutase. This is a family Precorrin-8X methylmutases also known as Precorrin isomerase, CbiC/CobH, EC:5.4.1.2. This enzyme catalyzes the reaction: Precorrin-8X <=> hydrogenobyrinate. This enzyme is part of the Cobalamin (vitamin B12) biosynthetic pathway and catalyzes a methyl rearrangement.	1.29438e-88
NC_011831.1\|WP_012616535.1\|1553308_1554091_-\|uroporphyrinogen-III-C-methyltransferase	gnl\|CDD\|381169	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT). SUMT is an enzyme of the cobalamin and siroheme biosynthetic pathway. It catalyzes the first of three steps leading to the formation of siroheme from uroporphyrinogen III; it transfers two methyl groups from S-adenosyl-L-methionine to the C-2 and C-7 atoms of uroporphyrinogen III to yield precorrin-2 via the intermediate formation of precorrin-1. Precorrin-2 is also a precursor for the biosynthesis of vitamin B12, coenzyme F430, siroheme and heme d1. This family includes proteins in which the SUMT domain is fused to other functional domains, such as to a uroporphyrinogen-III synthase domain to form bifunctional uroporphyrinogen-III methylase/uroporphyrinogen-III synthase, or to a dual function dehydrogenase-chelatase domain, as in the case of the multifunctional S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase/dehydrogenase/ferrochelatase CysG, which catalyzes all three steps that transform uroporphyrinogen III into siroheme.	8.36091e-104
NC_011831.1\|WP_012616547.1\|1566348_1566648_-\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	gnl\|CDD\|179494	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein.	1.36074e-39
NC_011831.1\|WP_012616531.1\|1548676_1550152_-\|cobyric-acid-synthase	gnl\|CDD\|234838	PRK00784, PRK00784, cobyric acid synthase.	0
NC_011831.1\|WP_012616529.1\|1546136_1547531_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	2.6414e-09
NC_011831.1\|WP_012616548.1\|1566644_1567385_-\|energy-coupling-factor-ABC-transporter-permease	gnl\|CDD\|181384	PRK08319, PRK08319, energy-coupling factor ABC transporter permease.	1.9768e-117
NC_011831.1\|WP_012616539.1\|1558582_1559788_-\|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase	gnl\|CDD\|381171	cd11644, Precorrin-6Y-MT, Precorrin-6Y methyltransferase (also named CbiE). CbiE (precorrin-6Y methyltransferase, also known as cobalt-precorrin-7 C(5)-methyltransferase, also known as cobalt-precorrin-6Y C(5)-methyltransferase) catalyzes the methylation of C-5 in cobalt-precorrin-7 to form cobalt-precorrin-8. It participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. CbiE functions in the anaerobic pathway, it is a subunit of precorrin-6Y C5,15-methyltransferase, a bifunctional enzyme: cobalt-precorrin-7 C(5)-methyltransferase (CbiE)/cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) (CbiT), that catalyzes two methylations (at C-5 and C-15) in precorrin-6Y, as well as the decarboxylation of the acetate side chain located in ring C, in order to generate precorrin-8X. CbiE and CbiT can be found fused (CbiET, also called CobL), or on separate protein chains (CbiE and CbiT). In the aerobic pathway, a single enzyme called CobL catalyzes the methylations at C-5 and C-15, and the decarboxylation of the C-12 acetate side chain of precorrin-6B.	2.54171e-63
NC_011831.1\|WP_012616532.1\|1550188_1551286_-\|histidinol-phosphate-aminotransferase-family-protein	gnl\|CDD\|223157	COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism].	1.94927e-79
NC_011831.1\|WP_012616540.1\|1559784_1561020_-\|cobalt-precorrin-5B-(C(1))-methyltransferase	gnl\|CDD\|234615	PRK00075, cbiD, cobalt-precorrin-6A synthase; Reviewed.	4.6394e-167
NC_011831.1\|WP_012616543.1\|1562360_1563758_-\|sirohydrochlorin-chelatase	gnl\|CDD\|225049	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism].	1.02542e-42

>NC_011831.1|WP_012616538.1|1557600_1558323_-|precorrin-2-C(20)-methyltransferase
MNAELTAVGLGPGDPELITLKGLRAVQAADVIFAPQSRDGDASIALRIATPWITPSRQEVVTLPLPMTRDSGQLRPAWQAAAEVMATTLGTERRGVYLLLGDPLLYGTFFYLWRELRVCAPTLPVKVIPGVTSFAAAAAAAGMPLAMADERLIVLPASYETDAATLQRLLTEFATVVLMKAGSVLPSILTALTQAGLLDHALYAERVGLEGEFITRDLRQLPSQPRPYLSLVIVRRGESL
>NC_011831.1|WP_012616537.1|1556800_1557604_-|precorrin-4-C(11)-methyltransferase
MTYPAVPGTVYFVGAGPGAPDLITVRGRDVLAQADLILYADSLVDAALPAAYARPDAQIVGSVELHLAQIVELMCQAAQAGQVVVRLHSGDPALYGAIHEQMAALDEAGIPYEVVPGVTAAFALAARLGVELTVPELVQTIILTRPAGRTPLPEREQLAGLAAHGASLAIYLGITRLPQVIETLLASGAYTSDTPVVVAYRVTWPDEVILSGTLGDIVPKVKAAGFTRQALILVSEALNPIHKRTDRPTSRLYDPTYSHRLRRRVVE
>NC_011831.1|WP_012616536.1|1554415_1556752_-|precorrin-3B-C(17)-methyltransferase
MTELAIIAITRTGVELARRLARAMPATVWVPARFATDWPTARTYTTVAEAVQTAWSAARAIVFIGAAGIIVRLIAPMLSHKTDDPAVVCLDEDGRFAVPLVGGHRAGANQLARQIAAITGGRAAITTASDTQGLPALDLIGREAGWRIAPDSAVTHVMACLVNGEPIGVWVDPALSTARDVLAAELAAVPVVEWVSEPSTLANDYFAAAIVVSHRRLADLWETLRPKALRYLPPVLAVGIGCRRETPAGELAEALATTLAEADLLPECVATIATAELKATEPGIIALAAQLGVPLTIISTEQLRALDPESFSPSAAGRFELPGVAEPCAVVAAHGPLLAPKRSFARCTVAVALRAPVANPCDAAPAAGQLALVSIGPGDLSQLTVAARQALANADVVTGYGRYIDLIRPLLRANQEVIATPAMGDEMGRARAAIELARAGRRVALVSSGDIGIYAMAAPVFETLHAEGWTGRDPVVEVIPGVSAFQALAARLGAPVNHDLCLISLSDLLTPWPLIERRLRAAAQADFVIALYNPRSQGRNWQLAAAIAIVRDHRPPHTPVAFGRQVTRADEQIMLTTLAEVDPEQADMLTVVLIGNSQSFALAGHVVTPRGYTNRTAAPTPTTAASPVPDYPIVLTKSSHMPAVVIGGGAVGERKVRSLLAAGFPVRLISPTVTPQLAEWASAGKLIWEKRSYQAGDLTGARLVFAATDDRTVNARIAAAASAAGALCNVADDPSAGDFHVPAIHRSGGITIAVSSNGAAPARAAAIRDAIAEWLAEA
>NC_011831.1|WP_012616535.1|1553308_1554091_-|uroporphyrinogen-III-C-methyltransferase
MTGKAYLVGAGPGRADLITVRGLTVLRQADAVLYDRLIAASLLDEAPPYAERIFVGKQPGHHTFCQDGITETLVRLVRNGLQVVRLKGGDPGVFAHLAEEASALAAAGLPFEIVPGVSSALAVPLHAGIPLTWRGIASAFTVVSGHEATPHGCSGISWALLAASPTLVVLMALGRLEQVCAALIAAGRNRDTPAALISRGASADQRVLLATLDSLPAKQQTAQLPSPAVLVVGEVAALANSLAWYDPAQFPANPMLWDDL
>NC_011831.1|WP_041470945.1|1551917_1553309_-|cobyrinate-a,c-diamide-synthase
MHLPRLLFAAPMSGSGKTTITAGLIAALRQRGLRIAPFKCGPDYIDPGYHTLAAGRPCHNLDSWLIPPDQIAGVLVRRSADADLALIEGVMGLFDGYAGDDDTGSSAHIARLTATPVIIVLDARAMARTAAALIAGLRDFDRRVKIGGVILNRVGSPRHAALVQQAIEQTVGVPVLGYLLRNEMLTLPERHLGLVPVAEPGRWQEWLDEAAQRVATTIDLDRLLAVATTAPPLIAPPLEPLVSSNSGPRPLIAVARDEAFNFIYPDNLDLLQAAGAEVAFFSPLHDTALPSGTAAIYLCGGFPELFAAQLSANQAMLTAIREAAASGMPIYAECGGLMYLTETLIDLQGQAFAMVGVLPGHSRMTPRLTLGYRTVTAQTDSWLWRVGETVRGHEFHYSVWEARPTDLPPLYACLPDAMRPQPASEGVAIGQTLASYIHLHFLACPYVAERFVAAASTFSQTQR
>NC_011831.1|WP_012616533.1|1551264_1551819_-|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase
MSSIILFTGGARSGKSRCAERYATRLSEHVVYLATATADDDEMRLRIEHHRRRRPSTWRTVEATAHLATVLAELPAGTVVLLDCLSLLVSNLLLANESHPEPAINRELDDLLAMVDQRDLTLIAVTNEVGMGIVPAYPLGRQYRDLLGLANQRVAAAATAVYLVVCGIPVELRALEAAWNRTEL
>NC_011831.1|WP_012616532.1|1550188_1551286_-|histidinol-phosphate-aminotransferase-family-protein
MEPHGTVVHGALDEAELAMLGLHAEQLIDFSSNINPFGPPATVLAALRALNPAPYPDRSCLRLRQQLAHLHHCDPAAVLVGNGANELIHLVARGLGQPDTTALMVAPTYGEYAYAANLVGMTIAEVRSTAADQFQLDRTALIAAIEHFRPRLLWLCSPNNPTGVALDTATILECAHVCARYDGWLILDRAYLSLTRDYTGCDPLDSIAVPRLIRIYSLTKSYAVAGLRIGYLIATPEVVSTIARFQPAWSVSSAAQAAALAMLADPAFLPTTLPQLWAASDELVAGLRQLGLNVWRAQMPFMLVQSTDATFTRRQLLTHGCVVRDCTSFGLPDWVRVAPRRPAENARLLTAWQVLIPKYAHTGDV
>NC_011831.1|WP_012616531.1|1548676_1550152_-|cobyric-acid-synthase
MPAPVVMVIGTASSVGKSTLVAALCRLAARRGLRVAPFKAQNMSNNAAVTADGGEIARSTAVQAAAAGIAPTVAMNPILIKPEGQRRSQIIVEGRPWQTLAAGDFWRRKTLLWEVVTRNLDALRATYDLVIAEGAGSPVELNLKAGDIVNMRVAVYAQARTLLVGDIDRGGIFAQLLGTLMLLDPTERQLIQGLIVNRFRGDPALFVDGVRILEERSGIPVLGVVPWIEDLGLAEEDAVAIEQSTPVMAQGITIAVIRLPTIANFDDFDPLAREPGVTVRYIDRPGELAGVAAVIIPGVKHTIAARRWLRERGFDEALRRFPGAIVGICGGYQLLGERISDPLAVEGNGGDEVGLGLLPVETIFVTTKQTTQTVAHARVPWGGQAPLHGYEIHMGRTHRIGAASALLTIIQRGAQAVLEEDGCISPDGRVWGCYLHGLFTNDEFRHGWLRQLGWQPTTSVSGSVDPINRLADHVARALGETVLDRLFRLTE
>NC_011831.1|WP_012616530.1|1547566_1548688_+|hypothetical-protein
MDNEQVIDIERWLSRGALAAHRGDLLTARRIFRALARIAPYDQRVWIGLARVAATAAERAEALSRIGPSPRSPLPLSGERVIEPSPLSPIPLRGEPDNQTTATPYTDGAKGIRPSPLDSLPDKVPVATSAGGEMALPPPLTSTRRHDQTQPRQRRLGWQLPAMLLLIAGGLLAVVMWQRQTLPSPPAHQLPATNLPPTLAAIGPLPTPLAGGTMVTQNVPTPSPLPPTPTPQPTSSPEPAMQPIGRLVTYDNWQFGLLRREDVVAIEQGIGDIKPTGQLWVALIAVSNDTLLERTLSATVFMLEDDAGQRYRPIAGASSRYLDLLGRSVYGDLALEDRFAPQSGLRSVPLLFDLPPERVPIRLWVDDKGWSLR
>NC_011831.1|WP_012616529.1|1546136_1547531_+|hypothetical-protein
MADPESILQLGVEAARKGERDEARKLFRLLTREHPDHIQGWLWLAGVAEDREERQAALEQVLRLDPNNEMAKKGLQALGVSLPQAAPTPPPTPPPTARPPAPEIDEDDPFAALDELSEVMAADSGPVRRDPNIPRPEATPGSEPATSQPTGERAPTASVSRSTRSSEPPSRPSNRPSTSWARGSSKPATKPPRRSGGFSLGNLFRRSGPPKPNNTDLEAETVPAKKGLTPLTVILLAVLLVACVGLGFVFLAQRNRTASTPSTQATSQAATSAAVTAESVLAPTTPPVTEPTAVPSEEPTPEATVEPTPEPAPPPPPTIDPALANPTLVNPGTELTSNGWAYDFNQPTYAAPIIGPLNGITPNNGRFVVVLAFVRNTTGQDQPVPLDFFVLKDAQGRVWTPRLDASDAYVIRGINADLSHSDPVPADGFVRSVAILFDVAPDATDLVFFARSNPNQGWLVLRRV
>NC_011831.1|WP_012616539.1|1558582_1559788_-|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase
MSRRVPILVVGLTDAGADGLPAKLLLRIARADLLVGGKRHLAAFPEVAAERLVVEASVEPALARLQQAWATGEQAVVLASGDPLWYGIGASLRRVFPPEALDIVPAPTSAQLAFAALAEPWHDAVLLSAHSRPLAAIIPAVLAASKAAILTDHRQTPAVIAQALIAAGMEPASRCAVCEQLGGPRQRVVSATLADLVTAAFDPLNVLVVWNDRPVRPIPPGLPDEAFSTEAGQITKREVRLLSLAELALQPGEVLWDIGAGSGAVAIEAARACPTAHVYAVERRAEFIEHIHTNLRRFPAPNLHVVHGEAPETCADWPDPDAIFIGGSGGRLEAIIALAQQRLRAGGRLVLNLVTAGHLATALALLPAARVVQVQINRGAPIQFDLRFAALNPIFIVTWRV
>NC_011831.1|WP_012616540.1|1559784_1561020_-|cobalt-precorrin-5B-(C(1))-methyltransferase
MADMVPPRNKRGSRTGYTTGSNAAAAAKAATIALLSGRWPEQVTITLPIGETATMTPVVTQFDAESAYCCMRKDAGDDPDVTHGALICARVRLVTTPGIHLEGGEGVGRVTLPGLGLPVGGPAINPVPRQQITANVRDAVREYAPDGEAFLDRRGLEVVISVPGGEQIAQKTLNPRLGIIGGISILGTTGKVFPYSTAAWRASVIQAVEMAARNGVSKIVLCTGGRSEKFAMQIFPDLPEIAFVELSVFTGDALKTCIAHGVPSAVFVGMIGKMIKTAQGHMQTHVAGNQVDFTFLAQVCREVGAPDELVQAVAQANTGRHFLELCQQYGQQAPLQRIVDLALEQCLRFIAAHGGAMDFETILVDFDGKVLARAAAVAAAHAHPATLPPPLIERLPTEPLPEDDTVVEGEP
>NC_011831.1|WP_012616541.1|1561183_1561843_-|precorrin-8X-methylmutase
MTEHVPVTGAEIAARSFAIIRAELAERGITLPQPLATVVERIIHTTADFEFATITKASPGAIEAGVAALQRGCAVITDVQMARVGIDQRRLHRFGGAVYCFNDLPDVIQLAAATGLTRSAAALRWAHEQGHLTGAIVTIGNAPTALFEVLDLLDRGAQPALIIGVPVGFVNTAESKAALMARQDVAWIVTAGRKGGSPVATAIVNALLRLALGEDNRDV
>NC_011831.1|WP_012616542.1|1561839_1562364_-|flavodoxin
MTDVTCRIFILHDVGDHVAQLAQAIAAGVVTVPGAEVLIRVPNSATKTDLIAADGIIIGTPNWTGIKGTLKRWLDTTGDLWEEGSLAGKVGAAFTSSAGRHSGTEFTLLSVLHWMLGGGMIIVGLPWTPLMEQAGSYYGATSVGDITEADLLQAHALGRRVAQIAVQLRRGANL
>NC_011831.1|WP_012616543.1|1562360_1563758_-|sirohydrochlorin-chelatase
MNDTALLLIGHGTDDAAGIAEYHQLAALVQERFGLFVQPCFLELADPSIGQAIDACARAGYQRIVALPLLLGAAGHQKNDIPVALREARARWPELTIHYGAPLGVQYSLLKALGDRLAEAEAAAPPVPRAETALALIGRGSSDPDSNADVARMARLLWEGRGYARVMYGFYSITTPRVPETIDACIALGARRVIVIPYLLFTGRILQRIEQQVIAARQRYPDHDLVLTGHLGLHEGVIAAIEQRFHEAVQGQVTVNCDVCKYRRLFPGFTADFGRPQTSDHEHGLRGETPTNRLETILPPRYRGGRAVSAAPMTAAPLVYDETGQVAWDRVWGGDDPNNPFCELALAGGPPHRGTLLEPVDPATVHADPEGYARVITELARALTMVTDLPVKTDTAPGWIGLVCESEEMAIWLLRAIIVENVSVRRENRVLLLPAGPQFRLEAEIKNVVTAVAKTYHYWKEHIRQ
>NC_011831.1|WP_012616544.1|1563754_1564696_-|cobalamin-biosynthesis-protein-CobD
MPPIAHLIQQRAAAALAALVIDAVFGDPPNYLHPVGVMGRWLRWGERLAPAAPGARLAWGAVWLAGGWVMFGGVAALAPRHWLAQGALASLLLAYRGLDRAVAAVETALATGDLVEARRLLGWHLVSRQTNDLSTAEVAGAAIESLAENLSDSVIAPVSALLIGGLPAMLIYRFTNTADAMWGYRTERFEYLGKVAARSDDLFNWLPARLTALLIALAAQIVNRRGRQALIGAIRDARRTASPNAGWPMAAMAGALDTVLTKREHYTLGTGTRMADAALIREARRIGRMVMFLVTGFLLGLSVMRLVKQRSTL
>NC_011831.1|WP_012616545.1|1564831_1565575_-|ABC-transporter-ATP-binding-protein
MTALLALEAVSYRFPGNQTPALQAASLPIAAGQRIVVLGRNGAGKSTLLLVASGIIRPQQGRVWLHGAPVDYSRSGLHRLRRHVGLVMQSPDDQLFSASVWQDISFGPLNLGLSAAAARQAVLDAAAMCDVTDLLDRPTHALSGGQKARVALAGVLAMRPQCLLVDEATAGLDLWARHQVVQVFDRLVAEGGTVVLATHDLALARRWADLVVVLHEGRIVAVAPPAQVWADPELRMLIAPPEAWEGW
>NC_011831.1|WP_012616546.1|1565571_1566345_-|cobalt-ECF-transporter-T-component-CbiQ
MLRIIDRYAFTNRLRAVDPLQKAALAGMTLLLCLALDRLLVGWVALGWMVAVTVWYARVPLRVTGAVIGAESVFLALSVIGIAVSVGNEPPDAAVWAIPFGPLWLSATGGSLQTALHVLSRALGSAAALNFLILTTPLIDLIELLRRLRVPALLIEVMALSYRALFVLLDTLDQMVTAQTVRLGYASWRATVRSSALLGSRLFIVAYRRSQALEVALTARGFAGELRVLPLSYTVDRQLWVIGGLIGASLVAARWWL
>NC_011831.1|WP_012616547.1|1566348_1566648_-|energy-coupling-factor-ABC-transporter-substrate-binding-protein
MNVKPLPWPVVVALVLVVIALAIAPIVLIRDTEFGGADAAAEAAIVEIAPDYEPWFAPLFEPPGSETESLLFALQAGFGAGVIGYFFGWQHGRRQRRDR
>NC_011831.1|WP_012616548.1|1566644_1567385_-|energy-coupling-factor-ABC-transporter-permease
MKHRWFIGVLGAAILIAVEARPAYAMHIMEGFLPPLWALVWFAVMIPFWVIGFRQLQRMVREKPEVRLLLGFAAAFTFVLSALKLPSVTGSSSHPTGTGLGAILFGPWVMSVLGSIVLLFQALLIAHGGLTTLGANAFSMAVVGPFVAWLIWRGLAGRAPFWLVVFLAAALADLSTYVVTSLQLALAFPDPAGGILAAFAKFGAIFAVTQIPLAISEGILTVLIMNMLQTNAAAELQALAIKGVRA

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Crispr_ID: NC_011831_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_12

1621275-1621387

Orphan

Consensus_repeat	Method
ATACCTGCGGTATACGGATACGACTGAGACTTTGCAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_12

>merge|NC_011831|12|1621275-1621387|CRISPRCasFinder
ATACCTGCGGTATACGGATACGACTGAGACTTTGCAATAGACGGCGTGAAGAGAACCGCCCATACCACCGAACAAATACCTGCGGTATACGGATACGACTGAGACTTTGCAAT

>NC_011831|12|10|1621275-1621387|CRISPRCasFinder
ATACCTGCGGTATACGGATACGACTGAGACTTTGCAAT	AGACGGCGTGAAGAGAACCGCCCATACCACCGAACAA
ATACCTGCGGTATACGGATACGACTGAGACTTTGCAAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012616575.1\|1602345_1603293_-\|hydroxymethylglutaryl-CoA-lyase	unknown	unknown	gnl\|CDD\|163676
NC_011831.1\|WP_012616588.1\|1622554_1624846_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372732
NC_011831.1\|WP_157044841.1\|1628767_1628911_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616582.1\|1610345_1612154_-\|oligoendopeptidase-F	unknown	unknown	gnl\|CDD\|341071
NC_011831.1\|WP_012616576.1\|1603526_1604075_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616584.1\|1614917_1617653_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223510
NC_011831.1\|WP_012616586.1\|1618882_1619269_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616585.1\|1617689_1618847_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_041470406.1\|1608364_1609138_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NC_011831.1\|WP_012616595.1\|1637406_1640349_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|273955
NC_011831.1\|WP_012616594.1\|1635928_1637269_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224169
NC_011831.1\|WP_041470412.1\|1628968_1629361_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_041470408.1\|1609243_1610296_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|378117
NC_011831.1\|WP_012616592.1\|1631229_1632828_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|224490
NC_011831.1\|WP_157044839.1\|1628523_1628667_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616578.1\|1604652_1605972_-\|RtcB-family-protein	unknown	unknown	gnl\|CDD\|376465
NC_011831.1\|WP_012616593.1\|1633366_1634647_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616589.1\|1624892_1627946_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|379234
NC_011831.1\|WP_012616591.1\|1629757_1630951_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341031
NC_011831.1\|WP_041470950.1\|1606138_1608091_-\|DUF3459-domain-containing-protein	unknown	unknown	gnl\|CDD\|200463

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012616575.1\|1602345_1603293_-\|hydroxymethylglutaryl-CoA-lyase	gnl\|CDD\|163676	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	1.18057e-156
NC_011831.1\|WP_041470408.1\|1609243_1610296_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|378117	pfam09084, NMT1, NMT1/THI5 like. This family contains the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine. They are regulated by thiamine. The protein adopts a fold related to the periplasmic binding protein (PBP) family. Both pyridoxal-5'-phosphate (PLP) and an iron atom are bound to the protein suggesting numerous residues of the active site necessary for HMP-P biosynthesis. The yeast protein is a dimer and, although exceptionally using PLP as a substrate, has notable similarities with enzymes dependent on this molecule as a cofactor.	6.27896e-64
NC_011831.1\|WP_012616582.1\|1610345_1612154_-\|oligoendopeptidase-F	gnl\|CDD\|341071	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid. This PepF family includes Streptococcus agalactiae PepB, a group B streptococcal oligopeptidase which has been shown to degrade a variety of bioactive peptides as well as the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly- Pro-Ala in vitro.	0
NC_011831.1\|WP_012616591.1\|1629757_1630951_-\|MFS-transporter	gnl\|CDD\|341031	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters. Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.35539e-63
NC_011831.1\|WP_012616584.1\|1614917_1617653_-\|ATP-binding-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	6.45645e-16
NC_011831.1\|WP_041470406.1\|1608364_1609138_+\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	3.1452e-50
NC_011831.1\|WP_012616595.1\|1637406_1640349_-\|glycosyl-transferase	gnl\|CDD\|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	7.30567e-167
NC_011831.1\|WP_012616594.1\|1635928_1637269_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224169	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion].	9.58565e-96
NC_011831.1\|WP_012616588.1\|1622554_1624846_-\|hypothetical-protein	gnl\|CDD\|372732	pfam13809, Tubulin_2, Tubulin like. Many of the residues conserved in Tubulin, pfam00091, are also highly conserved in this family.	1.19361e-51
NC_011831.1\|WP_012616592.1\|1631229_1632828_-\|amidohydrolase	gnl\|CDD\|224490	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only].	1.23532e-164
NC_011831.1\|WP_012616578.1\|1604652_1605972_-\|RtcB-family-protein	gnl\|CDD\|376465	pfam01139, RtcB, tRNA-splicing ligase RtcB. This family of RNA ligases (EC:6.5.1.3) join 2',3'-cyclic phosphate and 5'-OH ends. They catalyze the splicing of tRNA and may also participate in tRNA repair and recovery from stress-induced RNA damage.	1.36389e-96
NC_011831.1\|WP_012616589.1\|1624892_1627946_-\|VWA-domain-containing-protein	gnl\|CDD\|379234	pfam13519, VWA_2, von Willebrand factor type A domain.	9.63698e-15
NC_011831.1\|WP_041470950.1\|1606138_1608091_-\|DUF3459-domain-containing-protein	gnl\|CDD\|200463	cd11324, AmyAc_Amylosucrase, Alpha amylase catalytic domain found in Amylosucrase. Amylosucrase is a glucosyltransferase that catalyzes the transfer of a D-glucopyranosyl moiety from sucrose onto an acceptor molecule. When the acceptor is another saccharide, only alpha-1,4 linkages are produced. Unlike most amylopolysaccharide synthases, it does not require any alpha-D-glucosyl nucleoside diphosphate substrate. In the presence of glycogen it catalyzes the transfer of a D-glucose moiety onto a glycogen branch, but in its absence, it hydrolyzes sucrose and synthesizes polymers, smaller maltosaccharides, and sucrose isoforms. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>NC_011831.1|WP_012616586.1|1618882_1619269_-|hypothetical-protein
MRKITWKDVNLYVVSIATSCMAWLLDITGVNQRFIEIGWNFWLVYGIIFVLLVAGLYSLCVFQPDLGAQLATWGSSSGTTRFWDVVAIIFAFSFFIADSDYHRGGAILLAVSALQGILLGERNLTVAS
>NC_011831.1|WP_012616585.1|1617689_1618847_-|hypothetical-protein
MRFVNDPELMIDEKTSGFLQKIKDNDYELYEEETGSWKRVQSIVQFLWQKRFKGLRKRALFTVILGDGDVLLRDRQSLVGDIDVMYELIHGNELLCYKPDEISQMVFGDLKKKLRSMVRHYNTADFSQEHVDILEQIEGTVDGNGYRLSVKTAQVVELIGRVQAIAQANVAAQKVYDEHQLSLEQRRQRDQIKIEIERLLGVEKLKLELQAEHIRRIRLIDAEMAEKEQRRLLEKIQSLLSLPPELIPAAISLIDPNSASSLAQILAAHASREQFEKLIEHFSPSPRLPSPMREPPMLQVLQDPIVTKIREIAGVRDVRKQNNDYLISFDEPSQYIKLQLSGNKVIRVLVGTTPNPTRIWNGDLSGDVVNVIQRVITYLRGRKTS
>NC_011831.1|WP_012616584.1|1614917_1617653_-|ATP-binding-protein
MQHGFDQTFWEPKNNKFWEPKNNEFITPRAIFGAEVDGLPDFWDEGLSLEEQNQLMQKVIERQKTFVHALSFLRGTAQFELRMVCDPHAPQRLRLFYLVSVENAGDPELVWRQFHNAFPYDLDFRLRMLTREEVQQICEQPFREPMSLTYYEWVQSPFLVTLGAEIANCWVAPELSTDGSHTLLRTLLQQACPIMIGFTVAPIEVDENVTNVLENWQKLLERVEINLSITVNGLRDDDPRKILVDILKDKLYPMNKPLLDYWLYLINEGSKTPKFQLEIVKNAAQRIIQSKDSLFRWRVHAAVPSDRTIDPVIDRAVTDRLRPRSAGIVSYQCYRCEVDIDKLPVNNVRFIRLDTPERSDDDPARLIIDDIGAAALLQLPILPPGGIPGVRSFPANPFTSWQLEEEDAAHNSIKYIKIGEYIDSRIGLLDKSRVASISLDDLTRHVLITGSTGSGKSTTSKRLITELHRHKVPYLVIEPVKSEYGDLAFADEIADPPYPDFFVPGRFDDPIWFNPFYIRKGVSLNTHLSYLTSCFEAAFPLSDVQSMLLKEVLYEAYREKFAEKSFFISDSVPIEQDLADEDVPSLDDLVKAKETIDKFGYKGELKSNLKAAIELRLQHLQKGIIGSILQPRNKGFPSFENRLKDILQKPTIIQLNQIGNKEEKALIMAFILMAMYEYYEQQTNSESLRHVTLIEEAHVLLENVTRESKEGSANTRGKAIELFADMLAEIRSRGEGLVIVEQLPSKLIPEAIKNTNLKIMHRLTAREDRDILGAAMNFNERQSRFATTLQRGQAIVFREGLSQPALIRVIPIKLQSDIRSEVDEVFLSMGRFEQKERGRVVSGFKFPPELFDCLQQVSDGKKNLEQLFDITGKYLSNKSNKKIKPDDRRAIKWFLYRLTRPYPKYFKLIFG
>NC_011831.1|WP_012616582.1|1610345_1612154_-|oligoendopeptidase-F
MTLSANSIPTRAEIPVEYTWDLSQIFADVPAWEQERSAVEARAQELAALQGTLAQGPAQLLAALTLRDEVAQRLHALYVYALHRKDSDGTDPVGQGLAERAGSFAARIQAVLAFIEPEILTIPAETLDEWLAATPGLQVYRYALEKLNRQRAHIRSAEVEQVMAALSDIVRAPYATFSMLTDADLQFPTIEDEQGQPVKLSHARYGRLLESHDRRVRRDAFKGYYSAFLPFRNTLATTLGAAIRSHVIEARLRNYGSALEAALAPNEIPVEVYHNLIATVEANLPRFHRYLTVRRRLMGLDDLHFYDLYVQPVPDVEMTIPYREACDLMREAFRPLGPEYGAALDQMFTRRWIDVYENVGKRSGAYSGGSYGTPPYILLNYQDRLRDVFTLAHELGHSLHSYFTRATQPFVYGEYTIFVAEVASTLNEALLTHYMLQSGADEALRRRLLAQQIEEIRGTIFRQTMFAAFELWMHEQAERGQPLTADALSQHYRELVVRYHGPELVIDDELAYEWLRIPHFYYQFYVYQYATGLSAALALSRQIINEGQPAVERYLRFLRSGSSRSSIDLLRDAGVDMTSPAPIQAAMDTFAELVSQLEQLAP
>NC_011831.1|WP_041470408.1|1609243_1610296_+|ABC-transporter-substrate-binding-protein
MFHCRDHASRQVILMLLTIFVITTGCSNPTPTNNDTRGTPEVTDVTMRLQWLPQFQFAGYLVAEARGYYRDAGLNVTILPGGPDAVPLPLVATGANTFGSTGADTILISRAQGIEVVALATWFQVSPVAFMVHRDSGIRSPQDFVGRRVAMFYGDNVETEYRALLAATGVDPTSINEIPGDYSIAPFLERRADVWPVYATDQPYTARAAGADIELIVARDYGVELMGDVLFTTAEFARKNPNTVRAFVQATLRGWQDAITDPAAAVNIILARNPDFDRGHLEFEATETIKLLRYGIGARCVGASDQQAWAKEAELLRSLGVLKTAVDPATVLVTDAVDDYYRARGIECQR
>NC_011831.1|WP_041470406.1|1608364_1609138_+|ABC-transporter-permease
METMTTPPNLVHRFVPALALGIALLAVLEWGLPAAGIPAYLLPPPSRVIIAALQPEVRLAYHTIATAGAALLGLAVGTLISFIVAVAFLFSRPLEDALYPWVLLGQSLPSVALAPLLTIWLGEGLAPRAAMAALFAGFPLLIATISGLRRPAPEQLAMMQAYGASQWQILRMLRLPAALPFIFSGLRVAGALAVIGALVSELAGAGRGLGYLITTSTYRLATDRAFAAVAAAAGLALALHGGFLWLERTIVYWERDR
>NC_011831.1|WP_041470950.1|1606138_1608091_-|DUF3459-domain-containing-protein
MSDREYLSREAARSLARLLPRVEQSFTAAGGNAADWAAFEQRLRREWPRLFGLLLSLYGHQYDFFYHLEQLLITMANSWYERPDWLKQRDAVREADHEWFQSERMIGGVLYVDRFCGTLHRLREFIPYFNELGLTYLHLMPLFEAPAGNNDGGYAVSSYRRVNSQIGTTEELAALARELECAGISLVLDFVFNHTSDEHEWAQRAQAGDPDYQEFYFLFSDRTLPDAYERTLREIFPTVRRGSFTWRPDMQRWVWTTFNSFQWDLNYANPAVFRAMAAEMLFLANLGVAVLRLDAVPFIWKRMGTNCENQPEAHQIIQAFNAIARIAAPALLFKSEAIVHPDDVLSYISPHECQLSYNPLLMALLWETLATREVKLLAHSLSHRFRLPAGCAWINYLRSHDDIGWTFDDNDARAVGIDPWGHRQFLNAFYTGRFPGSFARGLPFQENPDTGDARVSGTLASLAGLEQALSNGDPTAIETAIRRILLLHSVILSIGGIPLIYLGDEVGTLNDYGYVNDPAKADDSRWVHRPVRNQAAMDRRHDPSTVPGRIFSELVKLIRLRTSLPALRDGAMEVVRSDNRHVLAYVRQTGAQRVLVLTNFSEYPQTIAGNLLRMYGPGVELFDLVSDQPVSANEALVLPPYRFVWLTPVR
>NC_011831.1|WP_012616578.1|1604652_1605972_-|RtcB-family-protein
MKPAKLLADYTDHPSFRRICREAKQMLKEGMDVAMIRQAIAARYGTPPTELRLRDTPQPLKIVGEHLVEPGAIEQIRMALRLPPAIRGALMPDAHQGYALPVGGVIAYDRAVAPYQVGVDIGCRMHLSIFAELTPDDARRDRQLLLETLSKVTVFGIGSPKKPVADHPILTDSRWRATKLLRELHELARVQIGTSGGGNHFAEIVIGEWLTNGQPFVGLLTHSGSRGVGARIANYYAELADRETAVIAKGIPRTYGWLSTEREAGQEYLLAMRLAGDFARANHEVIHARFARALGLKVTQVIENHHNFAWEQPDGTVIHRKGATPAEAGVLGIIPGSMATASYIVEGLGDKATLASAAHGAGRRFSRAEARRTITPAMAAAVVREAGVLVRGLTVDESPLAYKDIESVMEVQIAAGLIRPVARMRPLVVVMSGARGEDS
>NC_011831.1|WP_012616576.1|1603526_1604075_+|hypothetical-protein
MDWTKQANDMIKLWTGTQQKVWESWMASMQYMAAPQSAEAWQKTVDSWRGAVKQALEAQVELTRLWAETVAANSVNMPTMPTVPGMPAMPGINPVSPTAVVEWSRQVLEMTRNFNESQTRFIEGWFDMLKKSDPTNVMRGWDANQVQKVMQSWQEAMQRVIEAQAELGKVMMGIVNGAMDKK
>NC_011831.1|WP_012616575.1|1602345_1603293_-|hydroxymethylglutaryl-CoA-lyase
MTVMESAPLPTFVHIREVGPRDGLQNEPVILSTAQKVKLIDMLSATGLQAIEVGAFVRPQQVPQMADTEAVFAGIKRHPGITYSAIAPNVIGARRALAAGADVVQVFLSASESHNRSNVNMSIEQSLTQVAEMAALVHGAGKPFDAVVSVAFGCPFEGDVPVERVLDICQRLLDVGAEQLTLGDTTGMAHPLLVQEVVRAFRARFPRQPLRLHLHSARGAGLANLLAGLQMGVDLFDSSIGGIGGCPFAPGAPGNLCTEDVVHLLHEMGIKTGLNLPALMNTARELERMLGHEVPGQTIKAGICKHLRDRESSPR
>NC_011831.1|WP_012616588.1|1622554_1624846_-|hypothetical-protein
MTTTLQPTQVYIPSALFIRPTLVIGLGGTGVDVIRQLKRRIRQSMQPMPGVLEFLVVDTEMPQNMPGEERILDREIAYIGDFNAGKVLDHLDQHPHIKDWWPNGQVVTGSIFRGARQRRLVGRLSLYARWGQFAHRLDTKLDKIRQIAENEQVEKQGIRTERTGQVRVYIVSSLCGGTGSGLLLDVAFRVRSKLGDDGEICGVFVMPSVFLQEIASYVQRLRIQGNAYAALKELNYYLSGQQQFEATFPDYAYQTPDGAKQVMYVRRPFDTVFLVDRDNGSEGLSSIDEVKQMIGQVIYLDTVTPIGREAASKRENLNDLASEQQNKFALAIAGVSTASLVLPVRPVQVHVEMMGMRILQEHILQEQNSTVKDSLKNIQESINKWLQEELTDENVEKLYKELQQKLKDLYTEKGLDHVASVISEIQLEPDDPDDFWLNRFKRKIFGKNHVSESPVDAVINHIRKNIASIKNVSDFVRKLRFYYEDWHAMMQQQLSNVVPSRPQSMSEPKSPQNNLSLFELVTELGYEREVPAPGNLPNAQWPIDRFVFSLASLSGDNRAKLINEVGLHAVFNLVYKFEKGEHKLFLDHPPNHDPVKAYLETVQGFVNPMLSESWTAIRYLRWFYNNIQYYSNTSTESRGSPIDPLRHLKLRSEKPFLRIDNARLGTEHASDIEVQRLIGYSPLLTSAERHDPDSVLSDFDSYYHVDTGTPNRIDVLVISFGYRIADLRDLPELKKAYEYFMKTQKETLHIHKNWSDGRLPDLV
>NC_011831.1|WP_012616589.1|1624892_1627946_-|VWA-domain-containing-protein
MHQSRSLLVLSIVVCIISICTVEPSIAQSGVEPLDLVLIIDHSGSMENPKYGRSDPHSMRFLAARMLIDLLNDEDRVGLILFSDNAEDYSDGLQLVQTGRGRLKENIAKMESQSTGDFTRYKDALELAGELLGETPANRRAAVIFLTDGAPTDMKQEEDYSTALDLFIDRNVPVFLLMLKPKEFDNNAVRNDTLQRISKTLQIFRDNKQTVIEIDDPASIARAFAKVITDLQPGVYIDVENPRGNPDRDQTIFQASVASSQRLADVTFVFYPNEGIFNQTPKITEQQRPNGVKEYDIQENENYVTARYKADVGTNIAGAWQFTANVPTESISAFTFFRSDIRIRPRYPGLKNPALIRGQNTLIGFTVDGVLQTQDVRLRVNLQQCPLDSRDQADSRVLPLEKGPDTTLWTILKDIGKDSEYVYVTVEFAPVNALSLWKCFTVRVLPNDPKMNVTITSVEHNSDGSFTVEANLPEGHKNTSMYVTGPSNYNDLVPFDGNRVQTKPLLTSGEYIVKVIAEVEYLGFNVALVDQQPETVPSFISLNESESQLAPTIRCDDRLLEGTIVLNAPFLLQPDEVRFQVSEISRDGRSVNTLSESSIALCPQGFMVADKKVRCPFQINLPDGMEAGQYRVNIKVDSDKHKVMFQSIPITFTVPQTGINISNTALDFDGPITPLRSAARTHVVLTGCRIENWPSITFIVESVRGSNQTYPSSYASLQPEPPSPDGDTRRYQVDVRFDSSLPPGEYEVSVQLKTDPPVMINPSPRIVVRGEKKSTVVELIAPPSDTFSAIWGFWLPFWQPTLTIPLTATVSFDDKIPVTYQPPRVELVKKDTERYSPDTFVTQWIDETRISKNTFIKTVELRLNRWLFFNSGTYTVTLTSDPVFSKDNEPKQLVVQVQVYGWWEYLWRGIVPAIIVLGIFFLVVFLVLYIFPVQHGKVIVDGREVKNLRKFNELRIRALPGRKIKVLSPSAKKVLRLGEKQVIDSKSVEYKPYTSGLAQFFLWLLLVLMVSPIFALS
>NC_011831.1|WP_157044839.1|1628523_1628667_+|hypothetical-protein
MMHTIRTVCTPAENALAIRVSDQIEQLDALIRAEDNGMAFFERTYLT
>NC_011831.1|WP_157044841.1|1628767_1628911_+|hypothetical-protein
MLVGFGLLAQHPALRQRYCADVPYGTEFDTAAIAVFNGRNNPLQFLG
>NC_011831.1|WP_041470412.1|1628968_1629361_+|hypothetical-protein
MAAAYDTGGRLIHRALDDARTELGRQECSITPIDFATDEMYAIPRKRLVAKLPNEHEVRFIADAFGTHLAELAKAKTVRLEDQAIADPIPLTYPFHPRQKCLVTLFKENEGYTPPPPASPPRGGKGGWTE
>NC_011831.1|WP_012616591.1|1629757_1630951_-|MFS-transporter
MLRNRVFTAVVSGHFMVDVLNSVGAVLLAVLAGPLGLSNQQIGLALTVYTLLGALSQPLFGWIADRLPGRTLQLAALGVAWMALCYTGVALAPNWTVLLPCFLLAALGSGLFHPIGTAGAAAAVPDKPASATAIFFFGGQAGLAVGPVLAGFVLTAAGTPGIIPIAVTAIIPATILLLAQQTVRSRRTSRAPAPATPQVWTALAIAVLIAFLALVVVRSSIQAVYQSFLPKLFSDRGWEPTVYGALAGTFMASAAVGNVLNGWMADRFGMRAATVWPLILSVPAGLACFLVTPLWVIFIACGLAGMLVGGQHSILVVHAQRILPVKQGLASGLILGFTFATGAFGTWLSGLLADIVGLETVMIGVTLLGLPAAALALTLPGRVHPAMVPAAVPAQGD
>NC_011831.1|WP_012616592.1|1631229_1632828_-|amidohydrolase
MKIIVLRNGTIYTLNPSQPVAQALAIRGERIIAVGDEATVRAAAGPQSEVIDLHGRAVVPGLTDAHVHIVLHGLARQQVRLTGCADFTAALDQIAVAAQRLPPGAWLRGNGWDHTLWGGCWPTRADLDRVCPDRPAMLDRKDGHSLWVNSRVLELAGITAATPDPDGGQIQRDEHGEPTGILLETAMELVRAIMPPPTRAERLAALRLAINEALSYGLTSLHVPPATNPADGPDTLIDLQALRAAGDLTIRVLVHIAGAHLDHAIGLGLRSGLGDDWLRIGGLKLFADGSLGSESAHMLAPYEGRDHTGIAVIPPAEMKEIVTRANAHGISVVVHAIGDAANRSVLDAIAAARPTAAHLALPNRIEHAQILAPTDIPRFAELGVIASMQPIHCTADMAMAERLWGTRCTTSYAWRSLLNAGATLAFGSDAPVETLDPWAGIHAATTRQTTDGTPVNGWYPEQRLTVAEALAAYCIGPAITEAAAERKGRLMPGMLADLAVLNNDPFQIPVSHLYTVHAELTIVGGTIVFERN
>NC_011831.1|WP_012616593.1|1633366_1634647_+|hypothetical-protein
MTHPRTNYALAGAALFNPMAAMYWLDVVRGQRPGIGLALVGAAGAVCAGLAADPRRHPWRAVTSGLAAAAGAALAGWALQRYVAWVEGESEDAPAPPNAHDLLVPTAAACAGAVGVAALVGRAPEQYIEYSGKHGDYRWIAARPHPAQRWLAWSGYLTHQLAIWGCIYTGQRQRLRYTADMRRLNWLALAVNAGGVALHYLQSHFTYDGLARDVPEGSALGSVSFILMLALALEAPRRGLFFGSRKVMPPAELVRFARRFHGYIFSWAATYNFWYHPIDPKPLHYTGLFHTLLLFVQSALLYTNAHRDPRWTLALEMMVLPHAVVSTLYKRSGLGAMFTFSLLAMFVINQMHGLNLPARARWTIGVTYAATVLSYYGARRQWHKLPDILRIPILEYGVLGILVLLSLLMRAMRRLEGNPQTLHTKP
>NC_011831.1|WP_012616594.1|1635928_1637269_-|NAD(P)/FAD-dependent-oxidoreductase
MKQIVVIGGGPAGVEAAVAAAKGHSQVTLISEGPIGGRTGWDSLLPSKVWLHAAELAGVAEHTAEGVAIGAVHVTPTEVLNRIKQVAQRWSEREAQRLQAAGVKVVHGVAAFHSPHELIVRNDDSQQTLTADAVIIATGSVPRFPPTMKPDGQRIIAPRFASHLNTLPPDMIVIGGGPTGSEFASLFSRLGVKVTWIVGAPGVLPMFDPAAGAALAAAMTAHGATIHQVDVERAERTEGGVVVTTADGATHTAAMAFLAIGRVPDLSRLNLAAAGLEVGANGQLAVDNYGRTVAGHIFVVGDAAGGPMLANRALAQAWIAGRTAAELSAPGYCPHTVVSAVYTVPEIAQVGIVSGGEGELQRVRASYTASLKAYLSDETEGWVELIYDAVNRQIRGGIAVGTHAADMLAPVALAIQTGATIADLAAVFAAYPTLSEVVFAAARAVK
>NC_011831.1|WP_012616595.1|1637406_1640349_-|glycosyl-transferase
MIRSRRLSSYQRNGRNGRRHIPPRLVRGRPTPRSPLGRWLINALLAVFGLIAVVLIALTGFFYNAYIQVAESLRPRLALLDNRALFENSRIFDRNGELLYEFFDTGKRTKVSIDEISPLLIQATIAIEDKTFYTNPGIDLAGIIRTLVDSLRVGEEVGGASTITQQVIKNSVLTPEERLPERRYERKLKEIILAQELDRIYTKDQILELYLNENFYGNLAYGIQAASEVYFGVSAAELDLNQASLLAGLPQLPSVYNPINYLERDEQGGYLPPVFVGDAWLDPNARLPAGTPLPRIRQAAVLRRMVEDGYITEAQARRALATPLRFAPQEAPLNAPHFVFYVRDLLLQRYGAQIVYGGGLRITTTLDLQLQRMAQATAFERIAELESRNIHNAAVVIMQPNTGQILAMVGSIDYNAVKPTKTPGESGNVLDGQVNVATRERQPGSALKPFTYLAAMEQGMTPETVLWDVPTEFPTGTGDWYAPQNYNGQWNGPVRIRTALANSLNMPAVKALKFAGIDYTIRLLERVGIRTGLKRGAGFYGLSLTLGGGEVSPLELTTAYNTLASGGRYFPPVAILEITDSQGRTLERFTQPPGEEVVDPALVAIISDMLSDDRARQAIWGLNSPLRLSQPAAVKTGTTNDWRDAWAVGYTPFVTVGVWTGNNNNEPTARVESLTGGGIIWRNVMENIFRLIAEDERYRTLFAAPFPDGEVQTEFILPEEVVRRPICELPGPFGGYREELFTQQMLKQLEEAALLSPTPTANLTNLIAGNVLCSAYDKVTVVRIPTPEEWTSTGELRPNPPPAPPTDPKAPPPPQDLSALTDGAYCRPAPEASYPPELVREIYLWKLPPPDPDEKVEYKWRGGDATVPLKYEDLPVCTEEMFKPPVPVPPVEGAILMPDLRRLGENQAKEVLALLGIDPGRIYVDYQGPDRAGEDYYRYGPYVVLSSLPAAGEWILPDTTIVLGIRAPDPEPPPPTPDSQ

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Crispr_ID: NC_011831_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_13

1698656-1698750

Orphan

Consensus_repeat	Method
CTAAAAAGGTGATCACCTGCGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_13

>merge|NC_011831|13|1698656-1698750|CRISPRCasFinder
CTAAAAAGGTGATCACCTGCGTCAAGGAACATGCTTGTGCATAGCCCGCGCCGACGCAGCATTTCGGGCAGGCTAAAAAGGTGATCACCTGAGTC

>NC_011831|13|11|1698656-1698750|CRISPRCasFinder
CTAAAAAGGTGATCACCTGCGTC	AAGGAACATGCTTGTGCATAGCCCGCGCCGACGCAGCATTTCGGGCAGG
CTAAAAAGGTGATCACCTGAGTC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_012616646.1\|1700970_1703151_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616645.1\|1699396_1701013_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223510
NC_011831.1\|WP_012616643.1\|1695571_1697605_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NC_011831.1\|WP_012616642.1\|1694726_1695275_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367559
NC_011831.1\|WP_012616635.1\|1688174_1689323_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|226434
NC_011831.1\|WP_012616651.1\|1707385_1708513_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340838
NC_011831.1\|WP_012616644.1\|1697836_1698565_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_011831.1\|WP_012616647.1\|1703147_1703819_+\|HhH-GPD-family-protein	unknown	unknown	gnl\|CDD\|224115
NC_011831.1\|WP_012616652.1\|1708531_1709092_-\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|377965
NC_011831.1\|WP_012616654.1\|1710064_1710568_+\|dual-specificity-protein-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|350348
NC_011831.1\|WP_012616639.1\|1692088_1693246_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NC_011831.1\|WP_012616641.1\|1693934_1694723_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270257
NC_011831.1\|WP_012616649.1\|1705001_1705655_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_012616638.1\|1691450_1692092_-\|cyclase-family-protein	unknown	unknown	gnl\|CDD\|224790
NC_011831.1\|WP_012616653.1\|1709104_1709989_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_011831.1\|WP_012616636.1\|1689364_1689991_-\|haloacid-dehalogenase	unknown	unknown	gnl\|CDD\|184746
NC_011831.1\|WP_012616640.1\|1693223_1693928_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226629
NC_011831.1\|WP_012616637.1\|1690077_1691187_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NC_011831.1\|WP_012616650.1\|1705657_1707262_+\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223363
NC_011831.1\|WP_083768876.1\|1703746_1704904_+\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|223348

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_012616652.1\|1708531_1709092_-\|SH3-domain-containing-protein	gnl\|CDD\|377965	pfam08239, SH3_3, Bacterial SH3 domain.	0.000134506
NC_011831.1\|WP_012616645.1\|1699396_1701013_+\|ATP-binding-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	6.61074e-22
NC_011831.1\|WP_012616643.1\|1695571_1697605_-\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	7.24867e-124
NC_011831.1\|WP_012616642.1\|1694726_1695275_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|367559	pfam03551, PadR, Transcriptional regulator PadR-like family. Members of this family are transcriptional regulators that appear to be related to the pfam01047 family. This family includes PadR, a protein that is involved in negative regulation of phenolic acid metabolism.	2.89129e-13
NC_011831.1\|WP_012616635.1\|1688174_1689323_+\|PAS-domain-S-box-protein	gnl\|CDD\|226434	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms].	1.40782e-61
NC_011831.1\|WP_012616651.1\|1707385_1708513_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	3.37033e-101
NC_011831.1\|WP_012616644.1\|1697836_1698565_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.000281358
NC_011831.1\|WP_012616647.1\|1703147_1703819_+\|HhH-GPD-family-protein	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	4.40982e-46
NC_011831.1\|WP_012616654.1\|1710064_1710568_+\|dual-specificity-protein-phosphatase-family-protein	gnl\|CDD\|350348	cd14498, DSP, dual-specificity phosphatase domain. The dual-specificity phosphatase domain is found in typical and atypical dual-specificity phosphatases (DUSPs), which function as protein-serine/threonine phosphatases (EC 3.1.3.16) and protein-tyrosine-phosphatases (EC 3.1.3.48). Typical DUSPs, also called mitogen-activated protein kinase (MAPK) phosphatases (MKPs), deactivate MAPKs by dephosphorylating the threonine and tyrosine residues in the conserved Thr-Xaa-Tyr motif residing in their activation sites. All MKPs contain an N-terminal Cdc25/rhodanese-like domain, which is responsible for MAPK-binding, and a C-terminal catalytic dual specificity phosphatase domain. Atypical DUSPs contain the catalytic dual specificity phosphatase domain but lack the N-terminal Cdc25/rhodanese-like domain that is present in typical DUSPs or MKPs. Also included in this family are dual specificity phosphatase-like domains of catalytically inactive members such as serine/threonine/tyrosine-interacting protein (STYX) and serine/threonine/tyrosine interacting like 1 (STYXL1), as well as active phosphatases with substrates that are not phosphoproteins such as PTP localized to the mitochondrion 1 (PTPMT1), which is a lipid phosphatase, and laforin, which is a glycogen phosphatase.	7.77902e-29
NC_011831.1\|WP_012616639.1\|1692088_1693246_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	5.24892e-88
NC_011831.1\|WP_012616641.1\|1693934_1694723_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270257	cd13539, PBP2_AvModA, Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins that serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. In contrast to the structure of the two ModA homologs from Escherichia coli and Azotobacter vinelandii, where the oxygen atoms are tetrahedrally arranged around the metal center, the structure of Pyrococcus furiosus ModA/WtpA (PfModA) has shown that a binding site for molybdate and tungstate is where the central metal atom is in a hexacoordinate configuration. This octahedral geometry was rather unexpected. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.53787e-102
NC_011831.1\|WP_012616638.1\|1691450_1692092_-\|cyclase-family-protein	gnl\|CDD\|224790	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism].	3.81873e-64
NC_011831.1\|WP_012616653.1\|1709104_1709989_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.37735e-15
NC_011831.1\|WP_012616636.1\|1689364_1689991_-\|haloacid-dehalogenase	gnl\|CDD\|184746	PRK14562, PRK14562, haloacid dehalogenase superfamily protein; Provisional.	7.49901e-85
NC_011831.1\|WP_012616640.1\|1693223_1693928_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|226629	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism].	1.85078e-76
NC_011831.1\|WP_012616637.1\|1690077_1691187_-\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	7.22451e-66
NC_011831.1\|WP_012616650.1\|1705657_1707262_+\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	4.16866e-05
NC_011831.1\|WP_083768876.1\|1703746_1704904_+\|DNA-cytosine-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	1.8993e-70

>NC_011831.1|WP_012616644.1|1697836_1698565_+|helix-turn-helix-transcriptional-regulator
MSTSDEKMPLSVLLFHSAMKQQMSLADFAAALGLSVATLRSYLFEAGSRSRMRSKTVEQMAKILNMPASEVRERAELLPYADQPFGEWLKAQMQGRFTRASLCTATKISDSAMKNYLSGQTTPDPDNAIRLAEVLGADSLTVARLIVASELRRRGVELPSAPHREQTVPVEPMPEPKPEPAPIPASTTVDGATPTPKSDTVIDEAIINAYTEQRLLNLWRRLHPQGRRATLTYIASLLAEGM
>NC_011831.1|WP_012616643.1|1695571_1697605_-|S9-family-peptidase
MTNPTPSRFTIDDLYELGWLEDPRLSPDGQTAAVVWVTVDRVNNGYRRQIVLVPTNGGSLRRFTRGKHDRQPRWSPDGRWLAFVSHRDDERGQIYLIPVDGGEARQLTAMPNGASDPAWSPDGRWIAFLSPVSVDEQAREDAGEMPSPPADAWEARRAREQRQHDEELRIDPRVVTKLPYRSGTSYFDDRWRQVYVVEVDDEDRTATPRRLTSGEIHYSTPVWLPNGEALLSTATRDPEADSLFAYYDVVRIPLDGLPHALTSPGFSYFDPQPSPDGSQIAFLRLNEERLLGEGRRVAIIPAEGGEPHDLTAHTDLNVEQFRWQPDGQGILFSAGWRGDAHVYQIGLPGTPTYRNGLTLVGGARLVSEFDVGRDGSIVFIAGSADNPCDLFFRSADGHERRLTAINDRLLQQRIIVPMEEMTYLSPDGSEVQGWTLHPPDFNPMQRYPLAVYIHGGPHVMWGPGFRSMWHEWQVAAARGYVVFFCNPRGSEGYGELWRDAIRRNWGEADAPDILAGIDALVARGYIDPNRIAVTGGSYGGYMTAWLIGHDDRFACAVAARGVYNLLTLHGTSDAHELIEIEFGGYPWELYEELWDHSPLAHAHKIKTPLLLLHSELDYRVPISEAEQLFAILRRQKKVVELVRYPREGHELTRSGEPRHRADHMRRTLEWFDRYCQV
>NC_011831.1|WP_012616642.1|1694726_1695275_-|PadR-family-transcriptional-regulator
MSASKPTFTIDLALLGLFRQGPLHPYELFQQLQQPDGLGSVWRLKQSHLYALLDRLEARRYLTHRLELQGHRPPRKVLSLTPAGEAAFAEWVVTPVSHGRDIRLEFLTKLYFARREGPVVAAQLLERQIGCCQRWLDKHTQRGEALPEQSFERLVQQYRVGQIRATLAWLEECQETLAVFGV
>NC_011831.1|WP_012616641.1|1693934_1694723_-|molybdate-ABC-transporter-substrate-binding-protein
MIRRMLLILLLSLTACSTSQAIATKPVELTVAAASDLTPAFKEIGSLFTERTGIQVVFNFGSTGQLAQQIERGAPFDIFYAANKSFIEELATNGVIDPNTMTVYAQGRITIWTRADQPLRPQQLSDLLDPAYKRIAIANPEHAPYGQAAREALERAGVWDQLKDRLVFGENIAQTLTIADTGNVEVAIVALSLSVQSSGRWVLIPAELHPDHPLIQMAAVVKGTKHADVARQFMEFVNSPDGHKIMKKYGFILPGEIVEPTR
>NC_011831.1|WP_012616640.1|1693223_1693928_-|molybdate-ABC-transporter-permease-subunit
MNWPAFWLSLQVTAVATFFIWLLGLPIALLLARTKFAGQTIFETLLLLPLILPPSVVGYYLLLVLGKGSPITEWFQIRILFTWPAAVVAAVVVGLPLMIQSSRAALANVDPRLEQAARTLGASEWRILWRITLPLARRGIIAGVVLGGARALGEFGATLMVTGNIPGRTQTLPVAIYDAVQSQRYQDANLMVLVMTVIAYLGLWLVRLLEDNSARPVTGTATVQEEMDATAIAR
>NC_011831.1|WP_012616639.1|1692088_1693246_-|ABC-transporter-ATP-binding-protein
MQPQLHVDFRRQLGHLTLRMQLQVGPEILVLFGPSGAGKTQTLQAIAGLMTPDEGLIKLNETILFRRRPGERMINLPPRHRRIGYVFQQYALFPHMTALENVAFPLGRSNDARQHALALLEKMHLAHVAHRKPHELSGGQQQRVAIARALATNSPVILFDESFSALDQPVRDRLHADLRALQAERGLIVIYVTHNLNDAFAVGHRVAIVTEGHVEQVGPLTEVYRYPVSVQVARILGIRNLMQVQVIGQETDRVWLDWQGWRIEASSLAQSVAVGQMVHAFINPVEIRLVYPDRPSHRFTGCNLLPARIVGRHADRYLHQLIIAVGSSTLEVAYPYTAYAGLDTNVGSEVQISFRPESVVIIPERSTTQIASSETVGLATVAHRL
>NC_011831.1|WP_012616638.1|1691450_1692092_-|cyclase-family-protein
MMYDLSRPILSGMPVYPGDPPVQVKPLSFPPWQISELHMGSHSGTHLDAPRHRFATGVGIDDITPDRLIGPGIVIDVGGYPANAELGPSVLAGYKLRPGMAVLFRTGWEVYWERDEYARHPYIGAALAEALVQREVRLVGIDAFSVDSTVAGGDAAHTLLLRNNILIVENLCHLANLELGVIYTVACFPLLIVGGDGAPARVLAWRATGFDPS
>NC_011831.1|WP_012616637.1|1690077_1691187_-|diguanylate-cyclase
MQTVIEEERQRFDRQRRRTYLIAGLLGSLMVTIDIVKLINNPVLPLAETIIYVTNDVLLIIISLSVCWMMITRRESLVTIERFMFIVFAAEALLFNGIVPPLLGQTLPQLWEQTVNDDIWFLLMICTLAFHLFRHRISVILVSSLYGLALAIVGGQVLVAGLQGNDVTMGLRALQVYGMGGIFLCFIYIISRYRSISQRLQIEYQLMQEWAFIDMLTGLFNRRRCEQLLQTNIEYSRRYHQPLTICLWDIDHFKQVNDTYGHEVGDQVLRQIARLAQSSTRSTDLVGRWGGEEFCLILPHTCLSEAEELVDRLRHLIKTQVRVGQQPVTASFGLVEYDTTDNLASLIRRADEALYAAKAAGRNRVVVMA
>NC_011831.1|WP_012616636.1|1689364_1689991_-|haloacid-dehalogenase
MSIEQIVAGCVVQIESIHTARERTIAATRVLVRQSANSIRAAHRGDFVTARHLLALAAEVVAEINDATAGAPEVRYAGYTQDALKEYAEAHLVFAFLAGEEPPTGEMIGVEPAAYLNGLAEAASELRRAILDGLRRGEIERSERLLTIMDDVYSSLLTVDYPEAITGGLRRSTDALRTVLERTRGDVTAAIRQEQLIAAMKALEARLE
>NC_011831.1|WP_012616635.1|1688174_1689323_+|PAS-domain-S-box-protein
MGNEATLSPAETARIQARLAELEELVRALQTGAADAIVIDGPRGPLIYTLRGAEHPYRVLVETMNEGALTLLADGAILYCNSKFAEMVGLPQDQLTGRSLLDLVAPADRLLCAELLSAGAAGSSKGPITLQAADGSQRPAQISLRALKDETEAHMCAVVTDLSGPQAVAAQLRAALAEKELLLREVHHRVKNNLQIVSSLLRLQAEHISDERVSAAVHDSQNRIRALALVHEQLYRSESLAHIDIGEYLQNIATSVWRSLSIRGSPIRLVSEVINGISINIDQAIALGLIVTELVSNSVKHAFPTGTAQGTISLRVRQDNTVLHVEVADNGIGMPPQINAGGGSLGMQLVHGLCRQIGATLSFGEGPGTTVIIRVPTSKLEA
>NC_011831.1|WP_012616645.1|1699396_1701013_+|ATP-binding-protein
MSDSTILALTDDALIGETSSSEFSSEGGTPTFDRIPFRVRAGKCPNLNTFVIALRQGDDNRAHYGRIIAGSELNLRASPTGMQKDDAYGMRRTDIRSSELSPDLVRVMEIELLGEISVLGNGSLEITEPTQLPHTGQPVYELPATIIPKLLNIPEDERVQDKDKPTSASGLYLGNIESGGHSIPFFLPNRAIARHIAVLGKTGVGKSYAVGVLMEELYAKRIPILSFDVLGDTEQTARELEGKHIVAGTDDFKIPYSIIGLEEFLAFIPNLTSDQRELITSAYGNVFDEALDKLEKGEELNIPFSRLTSLVEDIGRSINSKATPNAVKRVEAAFNRSSLLTDKPVTWTNLLETSPLINIYVGHLGQWQRNLVVGAVARILQRLRRRNHIPPFVLVIDEAHLFLPGGSDLPPSTLVLREMIRTARHDSVGVVLLSQSPSSMDRQILLTCNTRMLFALDPEDLRVVAGQIGDLPEETIKRIPRMARGTAVFTSGMDIMRHAVIVKIRERTFTTHVAETPDLREAVEQWHREHQKQQNSSR
>NC_011831.1|WP_012616646.1|1700970_1703151_+|hypothetical-protein
MAQRTSETAKQQQIIEAVLDVLQKVAGDVVGLSIRDLQLQLRALDLIVADHLLRSALNQLLDEGKIEKRPWPEHRGNFCFNLPGQGISQMSLFDLQTSRDEIEREERNGLDLWQRDEAERERATASVMEEIARSHALEENYAKLVHDIASVLADENPVDLILEIADWVIKDLNDLAEKIGAAGSGAQSEIQRLTRELGFRRSKAESFFQRLWRLDRSIGSAKGILDIPTVPQMLRGSKIRFDKEAAKRRLQERIVGNKVIEVITAPENPHKAAVGTDASVGDVMIEHARGSFIPPTPATLFVSAGAMRVLDRSNALSYWDYDLDPRELRRYKDLDAAVEGLLISPHLRREVITDFRHLRSAAMELRQYAEELRIVLQQSKWHPISGVPEIQHPPTVTLLIRDGRIFPLVHRLDDYDGASAPDDILYGEVVRREIRTFQKVFHNTAGNGCLGAIYGGAVKSPEYSWLAMITFWYLHVKKGHPDLVDAFYRPPLNDQAVTHLLFWGLAESKPDQAFGDPRNSFVTFRALRRFSDIAFFPHPRPLTDDSGKVVRTVQEDNIDDWLAYIQQHINEANQRYDQHKRGIPALTTIDDYKPFLDLCHRAGVAMFYAAPARMYRATLSDRAHFFTPRWEIAVDLTKDIGEEIKRRLEGLMAWLVEQDGLVADESHAVGGFEEVAEGLPLFIPNVVMEAHRAVGYGRERHAMDVQDDLQRLVTDIRAGRLGSVNL
>NC_011831.1|WP_012616647.1|1703147_1703819_+|HhH-GPD-family-protein
MSAEKFPYLLKAGAELSKHRIAETELPWRKYRTPYRIFLAEMLLVRTRTDIVANHFEKIASKYPTIEALALADESELREVLRPLGLSKRFPYLIKAARYICDNHNGEIPADFESLLKVPGIGKYTATAILIFAYGQKLVPADVNVLRFVSRFTGLEMGHVTKGSRELWNLLPLLSEANVGLSAENLLDFTRLICRARKPKCNACPLSAHCSYFKHVLSEQDGR
>NC_011831.1|WP_083768876.1|1703746_1704904_+|DNA-cytosine-methyltransferase
MQCMSLVCSLLVFQTCAFGARWSMKPDVTPTMIDLFAGCGGVTTGFKAKGFNVLAAVEFDPVTAQTYHLNHPEVALYVQDIRDISPNEMMARCRLERGHLTVLSVCAPCQPFSKQNRYRHADERASLILETVRFVEAFHPLFLFIENVPGLRQHSDILDTLVGDLEKLGYTMSEPAIVDAVKYGVPQFRRRFILLGTCLDRALRIPEETHASPHEAVRLGKQEWLTVKDAFAGLQSLHAGEQSATDPLHKARKHTPLSLERLKHIPHNGGSRDSLPIELQLSCHRNGRHGGYHDVYGRLDFERPANTLTTGCTNVTKGRFAHPTSDRAITPREAARLQTFPDTYRFYGSYEKISAQIGNAVPVKLAEIFAQYFHELWEKLSQRTG
>NC_011831.1|WP_012616649.1|1705001_1705655_+|hypothetical-protein
MKQKLTLELLKTEAHTFAEIESGHREPTLYGVTDGKAVGTYFEHKFRSYLRERYDFEEGSSASGIDSPELAVDMKVTSIRQPQSSCPFKSARQKIYGLGYSLLVFVYEKTDDPQTSTENLNILHTIFVSKERTADFQTTAGLRRILENEGNKDDIMAFIEERRLPVDEIEASALADEILANPPEVGYLTISNALQWRLQYSRVIEEAGSVGGLERLR
>NC_011831.1|WP_012616650.1|1705657_1707262_+|SAM-dependent-DNA-methyltransferase
MRDQQQRKAEFGDFQTPLSLAREVCSLIARTGFRPASILEPTCGTGSFLKASLETFPDVSRVLGFEINPQYVLQAQYAVTRAFPHASIEVHQSDFFLTSWSEIVKALPEPILVIGNPPWVTNAALSTWGSSNVPMKSNLDNLPGIDALTGKSNFDISEWMLRKNIEWLNGKNVILAMLCKTTVARKVLLYAWQNGVRIESASLYTIDAQEYFRASVDACLLFIRSNPTGNSKECQVFRSLHAQQPDSSFGLQDGMLVADVKSYLKRKDLTGTGFRGWRSGIKHDCSKVFELRIERGNLVNGLGEFVEIEPEVLFPLLKSSDLAAHRKPHRWMLVPQRAMSDDPSRLRLDVPKAWNYLTAHAHLLDERKSSIYRNRPRFSVFGVGPYSFAPWKIAISGLYKKLEFVQVPPFLGSPVVLDDTCYFFPCQSEEECNLLYELVTSEPAREFWSALIFWDAKRPITAQLLNSLDLMVLARLLGKECDIARTLAERQIVEYTEGAFQRLLFREETADYDGEPVTNEFDLLTNQHMHTGKQ
>NC_011831.1|WP_012616651.1|1707385_1708513_+|glycosyltransferase-family-4-protein
MLPLRIGFDARYARDHFPGIGRYITALLPALSRHCRSHHLFVFTNADQSLPSLPADVVELVPVRSGPFALSQQIELPLIARRLRLDVFHSPYLVKPYLLPCPSVVTIYDVVPLRYPQTLSPRGRRFYRVSLRLAAQSARKLITISSVSRDDLAFHLRIPRQQIAVTPLAAAPLFVPQPVDEITEVRLRYGLPRHYVLYVGSNKPHKNIDRLLRSWQRVLPALPEQYANTILVIAGKFDPRYPLPTALAAEHGVADQVKVLPNVADTDLPALYSGALLFVFPSSYEGFGLPPLEAMSCGTPVVCAYAGSLPEVVDDAALTVDPHNMHDIAEGILRVLRSPALRDVLRSRGLRQAARFSWQATAQATLAVYEEAVQR
>NC_011831.1|WP_012616652.1|1708531_1709092_-|SH3-domain-containing-protein
MPAKTDPRDWERLFNRRQRRGPLSIVLRALVGGLLVLGLIGATPLIMNQIELARVTTTQTQIALQTREARATIQQAATQSAIPLFTPTIAVTPTATPTLIPEPILGRAQVVRGGNIRSAPQVVPATVIGQVCVGDRVELFEERIVDANNRWYRLRVVETVGNCVPERVSAGTEGWVSGQLLGTIER
>NC_011831.1|WP_012616653.1|1709104_1709989_-|GNAT-family-N-acetyltransferase
MWPFRKPPNLNAAVVRPSQPDDVPAVSHLFRSAGRRFLAVGGADLYAAIEHGRAAVLQFDQEMLAVAALSRPITQVAWLRALALSERVQPNAALARLLPALDDVARGHTIQHLYYAGDEQSDQWLRPLLEHAGYAHQTDVVVYEKRGWDIPDYGNAHVQVRPAHAVDLAEVLQLDMRCFEPQWVKDEGILAPAIADGSFFMTAELDGQVVGYSYATSHFGGRLVHLVRIAVDPSQRGRGIGVRLLAEFVSYAAEIGAGLLTLNTQAYNYHAQRLYRWFGFTPTGERQPVLCRWL
>NC_011831.1|WP_012616654.1|1710064_1710568_+|dual-specificity-protein-phosphatase-family-protein
MIDLVHKYVATQWQRFFGLNISQINTMLFVGGQFHPEQWPNIYALGVRAVLSLQAERADTFSEPLPNRSLRLLVPDFHPPTIEQLDEGVHFIANAIGDGLPVFIHCHAGVGRAPLMTAAYLIARHGVNHRAALKMVHAARPIIRPNRRQLVRLREYEQLLHRRRQHR

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Crispr_ID: NC_011831_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_14

2004416-2004659

Orphan

Consensus_repeat	Method
GGAACTGCGAACACAACCCCCTGTCATTGCGAGCGCAGCGAGCAAGCTGCCCACCT	PILER-CR

2 spacers

The CRISPR arrays of NC_011831_14

>merge|NC_011831|14|2004416-2004659|PILER-CR
GGAACTGCGAACACAACCCCCTGTCATTGCGAGCGCAGCGAGCAAGCTGCCCACCTCACGATGGCGCTGGCCCGCCCGTGAAATGACCGGAGGGGTTAGGGCAAGCGTAGTCCCACCTGTCATTGCGAGCGCAGCGAGCAATCTTCGTCAAGATTGCTCGGGCGCTGACGCGCCCTCGCAATGACAAAGGAACTGCGAACACAACCCCCTGTCATTGCGAGCGCAGCGAGCAAGCTGCCCACCT

>NC_011831|14|4|2004416-2004659|PILER-CR
GGAACTGCGAACACAACCCCCTGTCATTGCGAGCGCAGCGAGCAAGCTGCCCACCT	CACGATGGCGCTGGCCCGCCCGTGAAATGACCGGAGGGGTTAGGGCAAGCGTAGTC
CCACCTGTCATTGCGAGCGCAGCGAGCAATCTTCGTCAAGATTGCTCGGGCGCTGA	CGCGCCCTCGCAATGACAAAGGAACTGCGAACACAACCCCCTGTCAT
TGCGAGCGCAGCGAGCAAGCTGCCCACCT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015940401.1\|1997991_1998609_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940399.1\|1996035_1996971_+\|photosynthetic-reaction-center-subunit-L	unknown	unknown	gnl\|CDD\|187748
NC_011831.1\|WP_015940412.1\|2015275_2016424_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340838
NC_011831.1\|WP_085953506.1\|1994836_1995739_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224137
NC_011831.1\|WP_015940395.1\|1992239_1992761_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|376771
NC_011831.1\|WP_015940408.1\|2011027_2011858_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NC_011831.1\|WP_015940402.1\|2000549_2002448_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NC_011831.1\|WP_015940403.1\|2002456_2003197_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NC_011831.1\|WP_015940407.1\|2009963_2010917_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|234698
NC_011831.1\|WP_015940410.1\|2013335_2014655_-\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237046
NC_011831.1\|WP_049762891.1\|2005473_2006511_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NC_011831.1\|WP_015940409.1\|2011854_2013339_-\|peptidase-S10	unknown	unknown	gnl\|CDD\|225490
NC_011831.1\|WP_015940400.1\|1996987_1997902_+\|photosynthetic-reaction-center-subunit-M	unknown	unknown	gnl\|CDD\|237736
NC_011831.1\|WP_015940411.1\|2014965_2015154_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|224739
NC_011831.1\|WP_015940394.1\|1991562_1992240_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl\|CDD\|274750
NC_011831.1\|WP_015940406.1\|2006568_2008881_-\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|377306
NC_011831.1\|WP_015940413.1\|2016440_2017151_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NC_011831.1\|WP_041470979.1\|1993395_1994826_-\|undecaprenyl-phosphate-glucose-phosphotransferase	unknown	unknown	gnl\|CDD\|274396
NC_011831.1\|WP_015940396.1\|1992916_1993282_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_083768884.1\|2004820_2005078_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225487

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015940411.1\|2014965_2015154_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|224739	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion].	8.38936e-13
NC_011831.1\|WP_015940399.1\|1996035_1996971_+\|photosynthetic-reaction-center-subunit-L	gnl\|CDD\|187748	cd09290, Photo-RC_L, Subunit L of bacterial photosynthetic reaction center. Bacterial photosynthetic reaction center (RC) complex, subunit L. The bacterial photosynthetic reaction center couples light-induced electron transfer with pumping protons across the membrane using reactions involving a quinone molecule (QB) that binds two electrons and two protons at the active site. The reaction center consists of three membrane-bound subunits, designated L, M, and H, plus an additional extracellular cytochrome subunit. The L and M subunits are arranged around an axis of 2-fold rotational symmetry perpendicular to the membrane, forming a scaffold that maintains the cofactors in a precise configuration. The L and M subunits have both sequence and structural similarity, suggesting a common evolutionary origin. The L and M subunits bind noncovalently to the nine cofactors in 2-fold symmetric branches: four bacteriochlorophylls (Bchl), two bacteriopheophytins (Bphe), two ubiquinone molecules (QA and QB), and a non-heme iron. Two Bchls on the periplasmic side of the membrane form the 'special pair' or dimer which is the primary electron donor for the photosynthetic reactions. The electron transfer reaction proceeds from the dimer to an intermediate acceptor (PA), a primary quinone (QA), and a secondary quinone (QB). Protons are translocated from the bacterial cytoplasm to the periplasmic space, generating an electrochemical gradient of protons (the protonmotive force) that can be used to power reactions such as ATP synthesis. The RC complex is found in photosynthetic bacteria, such as purple bacteria and other proteobacteria species.	2.61718e-139
NC_011831.1\|WP_015940412.1\|2015275_2016424_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	7.07192e-119
NC_011831.1\|WP_085953506.1\|1994836_1995739_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	5.68211e-62
NC_011831.1\|WP_015940395.1\|1992239_1992761_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|376771	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE. This family of proteins is involved in the synthesis of threonylcarbamoyl adenosine (t(6)A).	4.13447e-59
NC_011831.1\|WP_015940408.1\|2011027_2011858_-\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	2.35225e-22
NC_011831.1\|WP_015940402.1\|2000549_2002448_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NC_011831.1\|WP_015940403.1\|2002456_2003197_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.43078e-25
NC_011831.1\|WP_015940407.1\|2009963_2010917_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	4.60596e-27
NC_011831.1\|WP_015940410.1\|2013335_2014655_-\|GTPase-ObgE	gnl\|CDD\|237046	PRK12297, obgE, GTPase CgtA; Reviewed.	0
NC_011831.1\|WP_049762891.1\|2005473_2006511_+\|STAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	7.36855e-41
NC_011831.1\|WP_015940409.1\|2011854_2013339_-\|peptidase-S10	gnl\|CDD\|225490	COG2939, COG2939, Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism].	8.92488e-103
NC_011831.1\|WP_015940400.1\|1996987_1997902_+\|photosynthetic-reaction-center-subunit-M	gnl\|CDD\|237736	PRK14504, PRK14504, photosynthetic reaction center subunit M; Provisional.	2.05107e-160
NC_011831.1\|WP_015940394.1\|1991562_1992240_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl\|CDD\|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	7.87683e-46
NC_011831.1\|WP_015940406.1\|2006568_2008881_-\|PHP-domain-containing-protein	gnl\|CDD\|377306	pfam04326, AlbA_2, Putative DNA-binding domain. This family belongs to the AlbA clan of DNA-binding domains.	6.59155e-15
NC_011831.1\|WP_015940413.1\|2016440_2017151_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	1.15405e-48
NC_011831.1\|WP_041470979.1\|1993395_1994826_-\|undecaprenyl-phosphate-glucose-phosphotransferase	gnl\|CDD\|274396	TIGR03023, Sugar_transferase., Undecaprenyl-phosphate glucose phosphotransferase. This family of proteins encompasses the E. coli WcaJ protein involved in colanic acid biosynthesis, the Methylobacillus EpsB protein involved in methanolan biosynthesis, as well as the GumD protein involved in the biosynthesis of xanthan. All of these are closely related to the well-characterized WbaP (formerly RfbP) protein, which is the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose (NOTE: not glucose) to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase, and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.	7.1783e-179
NC_011831.1\|WP_083768884.1\|2004820_2005078_+\|hypothetical-protein	gnl\|CDD\|225487	COG2936, COG2936, Predicted acyl esterases [General function prediction only].	1.10419e-07

>NC_011831.1|WP_015940403.1|2002456_2003197_+|class-I-SAM-dependent-methyltransferase
MIYLDYAPIYHAAGQAAFGTALAHIILAHQPTTPRRVLDLACGTGAAALVFAAAGATVVGVDASAAMLAIARDQAYQRGLTVEWIEADIRALPDDPHLQPGSFDLCTCLFDSLNHLTEDGDLANVCRSVGKLLRPGGQFIFDLNTLAGFKTWHEYDQVIFDSPHLLVVNRLHFDHDRQRAYGRFVWFRREGERWWRGEETHCERAWSDDEIVAALNAGEMQLKACRTPQWTPPTVDEPRVVYVAER
>NC_011831.1|WP_015940402.1|2000549_2002448_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MTLLNANNLSKYYGAELIFHEVSFQIARGEKVAIVGMNGAGKSTLLRIIAGHETPDSGSLSLARGTRVAYLAQETRFLNEDTLWQAMEAALAEIQQWRRELAALETRLADTNAPDWEAVMERYGELSARFEHAGGYEIEQRIERVLYGLGFQPDQFHRQMGQFSGGQKTRAALAAALLSDPDLLLLDEPTNHLDMQALEWLEQFLRTWDGTLIVVSHDRYFLERVTKRTLELSFNRLEDYPGSYEKYLALKAERMERRLKEYKAQQEFIARTEEFIRRYKAGQRAREAKGREKRLERLKREQMIERPKEAAKLRVALDSQLRSGELVLRLDGVVVGYQVPHGRSNALLQADDLTIRRGERVGLLGPNGAGKTTLLRTLIGQLPPLQGIVRFGHEVRVSYYAQGHDVLQWDNTVLAEVLRVAPSLGEGAARNLLARFLFTGDDVFKRIADLSGGERSRVALAQLTLLPGNMLLLDEPTNHLDIDAREALEAVLKEYTGTILFVSHDRYFIDALADKLWIIEQGRIRQFVGNYSDYIASQQAVEPEPTTKPVAAKATPAKPPRPDQAERAKQRRLAALEAEVTALEQDLARLSSELDAASQARDIARLTALGAQYAELERLLADKYAQWEQLAA
>NC_011831.1|WP_015940401.1|1997991_1998609_-|hypothetical-protein
MTASPFRQRLGRRLGPVPYYQVIHAEPERLHLLSYPQANRSAAIPLLVSGGVLMIIAAVTLIAGVLAAVQELGFATAGLSAAVGGLFGGLAIQRLVGGYAIATTTNEIILDAETFTIRQTSRVGRPREQRIDRASIQGLRLRPYRIVTGGFIRRLQPVLALEMIVGDEVWIIDSAVVPAALQPLVNAMALALSVSVERVNEFPPR
>NC_011831.1|WP_015940400.1|1996987_1997902_+|photosynthetic-reaction-center-subunit-M
MATMDMMPGDLELGRDRGRIGKPIEIPLLENFGFDSQLGPFYLGFWNAVAYISGGIFTFIWLFVMLSQVNFNPVAFIKYFVVLQIDPPSSRYGLSFPPLNEGGWWLIATFFLTLSIFAWYMHIYTRAKALGIKPYLAYGFTGAIALYLVIYIIRPIWMGDWSEAPAHGIKALLDWTNNVSVRYGNFYYNPFHMLSIFFLLGSTLLLAMHAGTIWALEKYAAHEEWNEIQAPGTGTERAQLFWRWCIGFNANAYSIHLWAFWFAWLCGITGALGVFFSMPDFVNNWFQWGVEAGIAYPQGPTPLP
>NC_011831.1|WP_015940399.1|1996035_1996971_+|photosynthetic-reaction-center-subunit-L
MSRAKAKDPRFPDFSFTVVEGARATRVPGGRTIEEIEPEYKIKGRTTFSAIFRYDPFDFWVGPFYVGFWGFVSVIGIIFGSYFYINETILKGPYSFPQNFFAGRIDPPPAELGLGFAAPGEPGFAWQMTVLFATIAFFGWMMRQVDISMKLDMGYHVPIAFGVAVSAWTVLQIIRPIALGMWHEGFVLGVMPHLDWVSNFGYRYNNFFYNPFHAIGITGLFASTWLLACHGSLILSAAQYRGPEGGDIENVFFRDVQYYSVGEAGVHRLGYIFAIGGILSADLCILLSGWPVQDWVSFWNFWNNLPFWSGV
>NC_011831.1|WP_085953506.1|1994836_1995739_-|glycosyltransferase-family-2-protein
MMASLAVVILNYNRADLLADCLASIAAAPTRCHLSVWVVDNASTDGSATLVRERFAWVHLIESPVNGGFSAGNNLALRQILALPDPPDYILLLNNDTVVPPGAIDGLVEYLEQHPAVGAVGPKLLLPDGSLDLACRRSFPTPTVAFYRLFGLARLFPRSRRFAAYNMTYLDPDVETEVDSVVGACMMVRTAVVREVGLLDEAFFMYGEDLDWAYRIKQYGWKIVYYPGVTVYHYKRAASSRRPIPSIRAFYDAMRLFHRKHYAATTPALVNRLIEFGITIKELWALGRNLLLPPNARRVG
>NC_011831.1|WP_041470979.1|1993395_1994826_-|undecaprenyl-phosphate-glucose-phosphotransferase
MLRPRAWRALLRLLLVVFDLVALNLAAQMAYALGADSLVAAGFRPPADPLTPLRLTVVGTLIALIVFASHGLYEMKRGASRLDEAVKVVTAVSFTLVLVIFVNALIGEFGGEELPWTRDILFQGWLLAVGFCLVGRFIHRVMVYVLRRYFDIDTRRVLIVGAREPGRLVWNTIRRRPELGYRVQGFLSDTVPIGEVVDGLPVLGRTEHICRAIRATRADEVIIALSGRSSQDLVEVIALAEDESVAIKVYPDTFQLITNNGVSIGDLRDLPLVSVKNAALDNPLNRVLKRGLDLVVASLVLLFAAPLMLLIALAIRLESRGPIFFLQERVGLDGQPFWMIKFRTMRPDAEKFGTWTVQNDPRVTRVGRWLRRTSLDELPQLINVLIGEMSIVGPRPEQAHWVAQFRQQIPRYMRRHKEKAGLTGWAQVNGLRGDTSIEERTRYDLYYVENWSLLFDIKIILRTIINFITGRQENAY
>NC_011831.1|WP_015940396.1|1992916_1993282_-|hypothetical-protein
MEVTAREAAAHARRLGYQVIAAEQLRVTRCLLVLAEPSAQPFAVMIQRRALLTAADVQDFAEILFLRRLNRGLLIAVDGDFSAEARRTAQELRFASITLTNDLPPAAPLTTTGMNPVIDIG
>NC_011831.1|WP_015940395.1|1992239_1992761_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MTDQILPAAQTPHDLDFISHSPAQTERIGARLGRLLCAGDLILLSGPLGAGKTQLIKGIARGLGYDGPVTSPTFVLINEYRADAAHHRVPIYHVDLYRLDGVRELSTIGLDELLMTEGVCLIEWPERVAMALPSEHLQIVLSYVSETKRQVRLMPRGQRYRDLLATFKEATFG
>NC_011831.1|WP_015940394.1|1991562_1992240_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MLLAIDTATALTGLALYGPNGPLAESVWESGRNHTSQLLPQIDTLLRYVGATPADLTVLAVSLGPGSWSGLRVGLSLAKGMALAGDLPLIGIATLEALAYQYLPLLLPVYPLIRLGRERYATAPFAVRDRLERLGPDRNLTLSELCAMVSEGAFFCGDLDAATIAGLQRGLGERAVFPTPAARLRRPSFLAELAWQRHLERHYDDLATLEPIYLGEPVRAPVAGA
>NC_011831.1|WP_083768884.1|2004820_2005078_+|hypothetical-protein
MTKELRTQPPVIASAASKLPTSRWRWPARAITMGVAQFVNEAADGRATVAWIAEQPWFEGNLGLWGPSYVWYIQWWPSIDGPSRG
>NC_011831.1|WP_049762891.1|2005473_2006511_+|STAS-domain-containing-protein
MREKLAPDVIPFMATKATLVDLSHTLEDCILHNRLPSVIFTGFQESSHWRKETQRYLELANIASAVCIFAGGLPAFPDEQHIAVTLEAGDPLRQEWFLLVLTEWFCALLCGLDQQLPAEREAERRFETLLTFQPEAITQALAVLIPVVERYRPDRAAELVQAHTRFPPRPPSGPYITQIVSEIVSHLQRRYDQEHRLVMEIQALSAQQQVLETMIADLGAPVIPLLEGVILMPIIGNVDSRRAQLIMEHLLTGIAERMSDVAIIDITGMPIVDTAVANYLLQTIRATRLLGAQVIITGIRPSVAQAMINLGIDFSQIITRSTLREGIEAALGVLGYEIRRKGTAD
>NC_011831.1|WP_015940406.1|2006568_2008881_-|PHP-domain-containing-protein
MSTVREERNGMRWIRIDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVAGYEQFQREIEFLTTLEKAGRLTDDEEARLAEYRRLLDKITVLPGFEFTSHFGAHILGIFPPNRPLSLIEATLLQLGIPAEVLKGGVCSVANTRHVTEAYEIIHRAGGLVIAAHANGPNGVITETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGSDAHRLRRSAESDAQATHRHGIGDRYFEALLPDRSFEALKMLFTGQDFDRVRVPKRDQKQWSLDVVRFSGSTDRQILRAVPDPTTAAALWPDVAALANIGGGVLVIGCEPGGKVIGVERPDQLTESLRQSVQEHITPLPYLSFELMHYEGQDVIRVEVKAQDPPPYVGSNGTIYIRRDNKTFPANRSEIIQLCRQAIASGEPSSLDNGETLELPRSGVEIVSSQRRGGTWVYEVRDLRTTAGVTRDRAQGLWAYAIDRHEDLRDGRLDLQSQVRWRGRLGLWRAYRQGSRVKYDLVHRDPNGVIDHIFYGVSDWGLGEAWMSLLNEAGARIETETADFDQEDEMEVPPPPDIEPWGERRIRWRGRGGLVRIFLGDDGQPRFDLVMKDKETGVVQEYNNVPREKLSEAWLALIRVARPRTGIEVVSASRSEDGDWLYVFRNLRTGEISSAPWRLQDIEPGTVREYAARMYHQDIPLDQAKVRWWGNIGYLRPMRSQVDLVYVDEYGMTHIYYAARRDELTGEWRELLQLYGE
>NC_011831.1|WP_015940407.1|2009963_2010917_+|tyrosine-type-recombinase/integrase
MSDANGFGQQPARTILGELENFLAELRQEDRLSENTITSYRCDLRTAGLALCQELSTITAHDIQQFLAGRKEQPGTTNRRIASLNRFFRWAKERGYVTHNPVEQIGGRLPTEHRPQPIANEHELRALDQAIAAAPQPYRLIFTLLREIGIRTDEVLNLNLGDVILEPGREMLLVRDSKSGSKRMIALTPDAMPRSLRGLRHWVREMDHLPPDTPLFRSSRGTRASYDTLHRRWVAVCRAARLIDVVDGREQPRYTLHHLRHTAATKLVAFYPEQVVRRILGHRDPRSTRRYTELVRNRHHAAERPASLQVPSQREAM
>NC_011831.1|WP_015940408.1|2011027_2011858_-|alpha/beta-hydrolase
MTDPCQITARRTTVQLAHGRISLLEWPGTGRTVVLCHGITSSAATMWRLGRDLAAEDWRVIALDMPGHGQSDLSPAYDIDTVANIVGDVIQSLGLAEIALIGHSWGGATTLALLSGTHPARTAIQQAVLVDPLVRQEAAVAPSWLPQFSRGVGQPPSETLPMLREVNPDWHPCDYHWKAQALVECRYEQVAGLFLIPEDWTLVPRIARVQVPVLILLAEPEYTIVPPDVQQALRAAAPPTLVQMQLIPGTNHNMLRGPGYEPTYRALRAFLDASAG
>NC_011831.1|WP_015940409.1|2011854_2013339_-|peptidase-S10
MTTTTPPATPPAPPADRIVETKHTVTINGVEIGYTATAGVIIMKEEVEKDGVSSGEQARAGIFFVAYTRDGVTDLSRRPITFAFNGGPGSSSVWLHLGLFGPQRVLMSDEGWPLPPPGRFVPNQYSLLDVSDLVFIDPVSTGYSRVVAGESAKQFHDFRKDIESVGDFIRLYTGRYGRWLSPKYLAGESYGTTRAAGLTGYLQERHGLYLNGLILISAVLHFQTLAFDHGNDLPYMLFLPAYTATAFYHRRLEPELQRDLVATLRAAEAFALGDYALALLQGDRLDDSGIERIATQLARYTGLSRDYIIRSHLRIRDDRFVKELLRDRQRTVGRLDSRFTGYDRDAVGETAEYDPSLAAITGPYTAALNDYVRTQLGFHSDLPYEILTERVWPWSFNDHQNRYVDVAETLRRAMHRNPALRVHVASGYYDLATPYFATRYTLSHLGLDPALRGQISESFYPAGHMMYIHEPSLAALKAVLAEFVTAAEATGDHV
>NC_011831.1|WP_015940410.1|2013335_2014655_-|GTPase-ObgE
MATGTDFFDQATIVVRAGNGGNGAATFRREKYVPRGGPNGGDGGRGGHVYLIADPEYNTLLHFRYQRKFVAENGGHGGKNAMHGRNGADVYVPVPPGTVVRATINGVTYTVDLARPGQRLLAARGGRGGLGNIHFTTPTRQAPRLAELGEPGQELTLELELKMLADVGLVGFPNAGKSTLLSVISAARPKIAAYPFTTLTPNLGIVEVGVQRFVVADIPGLIEGAHAGVGLGHDFLRHIERTRLLIHIIDAAGVDGRTPWDDYEQINTELRLYQPELAQRKQVVALNKADLPAAQANLPILRERLPVAPEDLFVISAATRAGIEPLLQRVAELLRADPPPQRDPVDPDEPPLEWPLPPVDENAFTVEREGDAFRVRGVKIERLIAMSNLEQDEAIDRIQRVLEASGINEALMAAGVQDGDVVRIGRAELVWDDSGQHAL
>NC_011831.1|WP_015940411.1|2014965_2015154_-|twin-arginine-translocase-TatA/TatE-family-subunit
MIGGLGWGELLIILIIVIAIFGAGKLAGLGGALGSSIREFRKAVKGEDEPRSDTKTEGETKA
>NC_011831.1|WP_015940412.1|2015275_2016424_-|glycosyltransferase-family-4-protein
MHVAINAHLLAHTTSFRRAGVSHYIEQVLLHLAQIDHENRYTIYTTRGLDQAALGLPPNFVVKPSRLPTINPRIRIPWEQGIAPFLLRGKVDLYHGCLNVAPLLSPVPTVITIHDLAFIRFPQTFRAYNRIYLDLATRLSARRASRILAVSEHTKREVAGLFGIPPERIVVTPNATRSHFRPFAADIIDQFRARKGLPARFILYVGTLEPRKNLTTLLEAFALVSRRVPSVPLLIGGGKGWMYQPIFARLEQLNLQDRVKFVGYIPEEELPLWYAAATIFVFPSIYEGFGMPPLEAMACGTPVITSNTSSLPEVVGDAGLMVDPAAPTALADAMMQLLTDADLHAALRQRGLERARRFSWTETAAKTLAVYREVSAEMAYPR
>NC_011831.1|WP_015940413.1|2016440_2017151_-|signal-peptidase-I
MNDLHSPSEPAPTLPETETVRHPRAPLRYVVRELLETAIFILLVFLIVRSVVQNFKIEGSSMEPTLHTGQYILVNKLIYFHFDLNAPLRLLPGQSDLPPRIVYPFRPPQRGDIVVFEYPRDVRRDYIKRVIGLPGDVIEILEGKVYVNGVLLDEPYLRGAFTYCLGGYPCAQGPVTVPPNSIFVMGDNRGNSSDSREWDALPLDRVIGQAWLIYYPFSDWGLVPHHRYDTTTVATP

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Crispr_ID: NC_011831_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_15

2099177-2099287

Orphan

Consensus_repeat	Method
AGTTGCGGGCGCACCACCGTATTAAATGCAATCGTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_15

>merge|NC_011831|15|2099177-2099287|CRISPRCasFinder
AGTTGCGGGCGCACCACCGTATTAAATGCAATCGTCGCCTGGGTTGCAGCCCTACGATGCTTTGCGTAATCCTAGTTGCGGGCGCACCACCGTATTAAATGCAATCGTCGC

>NC_011831|15|12|2099177-2099287|CRISPRCasFinder
AGTTGCGGGCGCACCACCGTATTAAATGCAATCGTCGC	CTGGGTTGCAGCCCTACGATGCTTTGCGTAATCCT
AGTTGCGGGCGCACCACCGTATTAAATGCAATCGTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015940472.1\|2093226_2094564_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NC_011831.1\|WP_015940480.1\|2102927_2104826_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NC_011831.1\|WP_015940482.1\|2106516_2107272_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|236959
NC_011831.1\|WP_157044846.1\|2096732_2097260_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NC_011831.1\|WP_015940486.1\|2110795_2111566_-\|serine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|200082
NC_011831.1\|WP_041470983.1\|2097241_2098108_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187564
NC_011831.1\|WP_015940471.1\|2092360_2092912_-\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|367140
NC_011831.1\|WP_015940473.1\|2094721_2095963_+\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|274452
NC_011831.1\|WP_015940485.1\|2109350_2110769_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NC_011831.1\|WP_015940470.1\|2089819_2092282_-\|endonuclease-MutS2	unknown	unknown	gnl\|CDD\|234750
NC_011831.1\|WP_015940478.1\|2099768_2100809_-\|zinc-dependent-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176221
NC_011831.1\|WP_015940479.1\|2100942_2102883_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273429
NC_011831.1\|WP_015940476.1\|2098104_2099073_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940467.1\|2085246_2087595_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381604
NC_011831.1\|WP_015940483.1\|2107280_2108315_-\|mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|380413
NC_011831.1\|WP_041470452.1\|2105162_2106533_-\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864
NC_011831.1\|WP_015940474.1\|2095966_2096656_+\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NC_011831.1\|WP_015940487.1\|2111748_2112006_-\|FmdB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225210
NC_011831.1\|WP_015940484.1\|2108360_2109344_-\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|225173
NC_011831.1\|WP_015940469.1\|2089408_2089798_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|365823

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015940472.1\|2093226_2094564_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.79682e-26
NC_011831.1\|WP_015940480.1\|2102927_2104826_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.473e-53
NC_011831.1\|WP_157044846.1\|2096732_2097260_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.000153969
NC_011831.1\|WP_015940486.1\|2110795_2111566_-\|serine-O-acetyltransferase	gnl\|CDD\|200082	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase. Cysteine biosynthesis [Amino acid biosynthesis, Serine family].	6.60712e-88
NC_011831.1\|WP_041470983.1\|2097241_2098108_+\|SDR-family-oxidoreductase	gnl\|CDD\|187564	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs. dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	8.87792e-69
NC_011831.1\|WP_015940470.1\|2089819_2092282_-\|endonuclease-MutS2	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NC_011831.1\|WP_015940473.1\|2094721_2095963_+\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|274452	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II. 3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model. [Fatty acid and phospholipid metabolism, Biosynthesis].	0
NC_011831.1\|WP_015940485.1\|2109350_2110769_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NC_011831.1\|WP_015940479.1\|2100942_2102883_+\|AAA-family-ATPase	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NC_011831.1\|WP_015940478.1\|2099768_2100809_-\|zinc-dependent-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176221	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NC_011831.1\|WP_015940482.1\|2106516_2107272_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	2.07696e-71
NC_011831.1\|WP_015940471.1\|2092360_2092912_-\|CvpA-family-protein	gnl\|CDD\|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	8.22366e-08
NC_011831.1\|WP_015940467.1\|2085246_2087595_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	8.10251e-59
NC_011831.1\|WP_015940483.1\|2107280_2108315_-\|mannose-6-phosphate-isomerase	gnl\|CDD\|380413	cd07010, cupin_PMI_type_I_N_bac, Phosphomannose isomerase in bacteria and archaea, N-terminal cupin domain. This subfamily contains type I phosphomannose isomerase (PMI; E.C. 5.3.1.8; also known as mannose-6-phosphate isomerase) found in many bacteria (e.g. Bacillus subtilis) and archaea. PMI catalyzes the reversible isomerization of fructose-6-phosphate (F6P) and mannose-6-phosphate (M6P), the first committed step in the synthesis of mannosylated glycoproteins. The active site, located within the N-terminal jelly roll-like beta-barrel cupin fold, contains a single essential zinc atom and forms a deep, open cavity large enough to contain M6P or F6P. PMI type I also has a C-terminal beta-barrel fold which has diverged considerably from the N-terminal domain and is not included here. This subfamily does not contain an alpha helical domain that exists in eukaryotic and some prokaryotic PMIs. F6P is a substrate for glycolysis and gluconeogenesis, while M6P is a substrate for production of activated mannose donor guanosine 5'-diphosphate D-mannose, an important precursor of mannosylated biomolecules such as glycoproteins, bacterial exopolysaccharides and fungal cell wall components. PMI is also essential for survival, virulence and possibly pathogenicity of some bacteria and protozoan parasites, as well as for cell wall integrity of certain yeasts. Thus, PMI is a potential target against fungal infections causing serious illness or death.	9.29378e-76
NC_011831.1\|WP_041470452.1\|2105162_2106533_-\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	2.59933e-97
NC_011831.1\|WP_015940474.1\|2095966_2096656_+\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	1.78112e-93
NC_011831.1\|WP_015940487.1\|2111748_2112006_-\|FmdB-family-transcriptional-regulator	gnl\|CDD\|225210	COG2331, COG2331, Uncharacterized protein conserved in bacteria [Function unknown].	8.84253e-20
NC_011831.1\|WP_015940484.1\|2108360_2109344_-\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|225173	COG2264, PrmA, Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis].	1.1088e-102
NC_011831.1\|WP_015940469.1\|2089408_2089798_+\|cytochrome-c	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	6.88273e-10

>NC_011831.1|WP_015940476.1|2098104_2099073_-|hypothetical-protein
MNLHGGFLAGCGVLGVWTIAHLALNRHRWLQVAPPVALSALATLVNPYGWDLLRFLLETATGDRPEIADRTPLAIRSSLGLVYLAIVGLALLSVYFSTLPRRPILIGLFMLVAVMPLVAVRHLPLMGLAFAIFIGEHVGVVWHQIIRQQRDVAIPRQLQAVPWVLAIVVIASGMFGFSWRFAAGMNIPYNAMILLRESDFRGKLTNDFGWGQFLIWHLGPAVQVGMDGRRETVYPHHIYEQYLDFHTGLNDWEAILRYAPPDAILIQRDSPPANLLALHPDWQQIFADEISVLFVNTSSTAAQALTRYVQTFAPPAEVAVFP
>NC_011831.1|WP_041470983.1|2097241_2098108_+|SDR-family-oxidoreductase
MGNTFLITGGTGYLGNTLIRHARARGLPIVATFHRQTPPPSTDITWYPLDLRDPTAVRRLITEVQPAVIIHTAFRQYEPDLMAITGEGAGHVAAAAAEIGARLIHMSSDVIFDGEKAGAYTEADPPNPITDYGRAKARAEELVQHHHPHAAIVRTSLIYGFDPLDRHSAFALAVARGERTEKLFYDELRCPVFVDDLAAALLDLAQSDYRGVINLAGAETLSRYEWGRLLAQAHGLDPDRIVGALSAESPTPRPRNCALDISRALGLGYRLRGAREVLRTMGRLPALD
>NC_011831.1|WP_157044846.1|2096732_2097260_+|hypothetical-protein
MGRTAAGNPPPPLGRTAAGNPPPPLGRTAAGNPPPPLGRTAAGNPPLPLGRTAAGNPPLPLGRTAAGNPPPPLGRTAAGNPPPPLGRTAAGNPPPPLGRTAAGNPPPPLGRTAAGNPPPPLGRTAAGNPPPPLGRTAAGNPPLPLGRTAAGNPPPPLGRTAVRPYRGDSVWEIPF
>NC_011831.1|WP_015940474.1|2095966_2096656_+|ribonuclease-III
MVERLAELERALGITFRDRKLLQTALMHRSLFNEQPHLLSNLSDNERLEFLGDSVLHFVTTTWLFQQFPHQNESTLTSWRAALVSTKGLAECAATLNLGQYAFLSRGEDTPKGRQRSKLLADLFEAVIGAIYLDQGLEAARAFIEPFLHERIGTLQTAVLDPTTRLQEIVQSRHKQLPKYYLIDERGPDHQREYVMAVTVEGHEYTGTGPSKKAAKKAAAQAALADIDR
>NC_011831.1|WP_015940473.1|2094721_2095963_+|beta-ketoacyl-ACP-synthase-II
MDRRVVVTGMGAISPLGLSVAELWQGIVTARSGVGPITLFDPTGFDTTFAAEVKGFDPTNYMDRKEARRTDRFVQFAVAATKEALRDAELDITPANRDEIGVFIASGIGGIATLSEQLEVLRSRGPGRISPFLIPAMITNLAAGQVSIVTGARGPSYCVTSACASSAHAIGEAAETIRRGWAKAMIVGGSEASITPIGVAGFNAMRALSTRNEDYTHASRPFDAERDGFVMGEGAAVLILEDLEFALARGARILAEIVGYGATSDAYHISNLAEDGEGVARAIRLALKRGGIAPSEVDYINAHATSTPAGDPVETAAIKQVFGGREQSPPVSASKSQFGHLLGAAGAIEAVVTVLAMQHNLLPATINLQNPDPACDLDFVPNQPRPAQIEVALSNSFGFGGHNVCLAFRKYHA
>NC_011831.1|WP_015940472.1|2093226_2094564_+|MFS-transporter
MSSTTNTATATTQLSATPAATDQITSLSPSEVQRGMIISIWEGAIANIHISITGAIGGSVFLSGFALLLGANTFQIGLLGALPFIGQFFQFLSAYLETRFAKRRPIVLYTALTGRLVWAFLLWLPFTGWPAAWQLNMFFIALGCSYALNGMAGNAWMSWMSDLVPSNRRGSYFGWRNTIAGLSSMVSVYLAGLTLDHFRMNHAEAQGYAVIFGVAVVAAFGAALLIARQPEPPLTPRPWEGVGTFLLSPLRDDVFRRFTILATAWALVTGIAAPFFNIYGLTTLQLDFSLLALTGIVTNTVALVFSPLVGWLMDRYGYRLVVAVCVIGTIPLPLGWVLSTPHNIVPLWLTSIFSGVFWPGVNQGLGNLLMERAPATQRGTAMAIFSLITGLGTLIASLAGGALGQTMSQTTLHLGPLTVGGLAGLFVLTMLGRMVMAGVFWRILR
>NC_011831.1|WP_015940471.1|2092360_2092912_-|CvpA-family-protein
MNVVDLFFVILFFGALAAGFFQGTIRLLLVILSFYFSTVIASLYYQMLADIFVSELGGQRFVSQYVAFALIHLLCFVVLTIVGIYSFRYVQTPHSIEMLDRIVGSVLGIVVGGLAIGLTAVLLWNLFIVRGLANIDYPITRWLGGQIGASFMLRFFANAVLPSLYDLIDPILPDAARIIFQVQ
>NC_011831.1|WP_015940470.1|2089819_2092282_-|endonuclease-MutS2
MSIPETSLHTLEFDAVRDRLAHYTAFSASRELALSLTPSTDLNEVRRRQALTAEARLLLEEWPDLTIGGARDVRRSAHHAARGGMLDGTTLRDIAATLRSAATLRQRLSRLDDRFPNLRDLGYTLPALPHLIDAIEQAIGDDGQVLDSASPTLARLRHEVRVAFNRLQERLQSMIHSPTLAAALQEPIITVRNGRYVIPVKAIHRREVRGLVHDQSGSGATLYIEPLAIVELNNRWRELQSAEAEEVQRILGALSEQVGEAVSAIVSTVNMLAALDLVFALARYAIATRSTAPEIVDWRPDDPPSTEPPLRLIRARHPLLPPDKVVPIDLWLGGTFSILLITGPNTGGKTVALKTTGLLALMAQAGMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLTEAQSFPAAPTDQALFDYRRPAALVLFDELGAGTDPVEGSALARAIIGRLLELGVLAVATTHYPELKAFAYATPGVENASVEFDVETLAPTYRLSIGVPGHSNALAIAARLGLDPALIEQARSFIDRNEAQVEDLLAGIQRERAAATEALQRAEELRADAEKYRARLAAEQQAFAAEREVALAAARQEIEAELREVRQQLRRLREEYRSVSISRQWLEEAEKRLAATAEQAQQATERLQRQMVPSAPPPPAERPLQVGDTVHVASVGLNGEIMAIDTDDETATVQVGGFRLTVKCSELKRAKAADNGERRFAPPERPVNLPSMPDVSMTFDMRGWRVSEVSDRLDRYLNDAYLAGLHQVRLIHGKGTGALRQVVRDVLASHPLVASFTGGGRDGGDGVTIATLVDR
>NC_011831.1|WP_015940469.1|2089408_2089798_+|cytochrome-c
MSGQRNLPKYLWFYSICLMIIAVVGGCNQTEPPDPITEGQRIYTIYCLGCHSLDPAGPAALGPPLAGIGTRAANNSEGLSATEWLRREIINPDVVVAPGYTAGLMPRTYGTDFRPVQLEALIAYLASLE
>NC_011831.1|WP_015940467.1|2085246_2087595_+|transglycosylase-SLT-domain-containing-protein
MALQRLVRQRAVTWICGIMCCWLVACTTPSFQPSPDPTATPTELPATPTPLPITSTDLWQRAIAASVIGDEDTAAQFLSELLQLFPAAPEAPQARLLLARSYAKRGAWTSAAAVLRPLLSDPTQPIYVPALFLNARANEAAGLHEAAVAAYSEYESLQTPLAPYAALRAAAQLRVLGRLAEAEAAYLRAATSTIAAGQRAAAYEQAMELAVLANRPADGVAYARAILSFATQPDYRARILVRAAALADAAGDEESARALRREAITTYAGAAAVQAIDDLRAVGDTAFDPWAAAQAYRAVERWTDVIAMLDMAIASGQDPAEALRQRGLARRVLGDFSGALADLATARERATNPETFRQAALDWIQTYGQSGMTAEAAMLYRQYADEWPDDPRAPVALDRAAQLYDRLDDRATATAVRIELGQRYPTTTLGITALHRVALARFDAGDLTGAGELWQTLARHGQGIGQALGAFWAGKTAQALGDPAATALFQQAQASAPDSFYAVRAAEELGAVPTGHIPFTAPMTSDDWLALTEWIRSWASTESPNQTLAVVAERARLLAEVGLEDEARGEWLDGLRQIGESPVLALDLAQRAYHAGATYYALLAAERLTQLAPTTAGPPPTSLLRLRFPTPYADIVQQEATAFGVDPLLLYALIRQESLFNPAATSWVGARGLTQVMPETGRGIAQNLGMSNFQLDDLYRPYISIRFGAFYLGRRISDMNGSLHGALAAYNGGLGNARRWAGGNTVTDPDRFIEMIDFNETRNYVWSVYAFYGVYRSLYRWP
>NC_011831.1|WP_015940478.1|2099768_2100809_-|zinc-dependent-alcohol-dehydrogenase-family-protein
MRAVYYEAFGQMPWLANLPDPTPTPDGVVLAVRATGLCRSDWHAWMGHDPDIRLPHVPGHELAGEVVAVGARVTRWRIGDRVTVPFVCACGVCPQCQAGQQQVCDHQFQPGFTHWGSFAEYVAIDRADLNLVRLPDDMTYVTAASLGCRFATAFRAVVDLAKVSAGEWVAVYGCGGVGLSAIMLAHALGGQVIGIDINPERLALARDLGAVAVVNAATEADVVGVVRELSRGGVHIAIDALGSPTTCANAIASLRKRGRHVQVGLLLAEQRMPPLPMDIVVARELVIMGSHGMQAHRYDAMLDLIQSGKVQPQRLIGRTIRLDEAPVALVDLDSFRGAGVTVITEF
>NC_011831.1|WP_015940479.1|2100942_2102883_+|AAA-family-ATPase
MEHLNHLNPAQRAAVTAPIGPVLVKAGAGSGKTRVLTLRIAYLITHYGVSPSQILAVTFTNKAAREMRERLRGLLGSRIRGLTSGTFHAICTRILRESIEGRLKGYTASFSIYAGDEQLQLAAEALAGVSETPPRMIEADEVLRLISRAKSRMLTPRLMARFATDPLDRFVAACYRRYQRALEQANALDFDDLILTAYRLLSEDHDLLATYQQRWPHVLVDEYQDTDPSQHALIELLTRPTAHRPRSLFVVGDAMQSIYGFRNADHNIINRFTVDFPDAQVIELTTNYRSRQPILDAAYAIIRHSRSVSPMELRAAATVAAERSVLISEAKDSREEAEQVARSIAELQRQGRRLREMAVLYRTRHMSRPLEQALRHARLPYVVRGSVSFFDRAVVRDAIAYLRCIANPADNLSLTRIANVPARGLGGQALATIAAFASAQSIPLSEALGHAPVIPRLSPRAVEGARRLFALLQRWRRLATGTMPPDHLLADVLEQSGYMAALAERFDAEELAEARAHLQELLRAAEEHTELSAFLQEIALMTNADDDDDERDRVQLLTIHAAKGLEWPFVFVVGLEEGTLPHERSLGDPSALEEERRLCYVAFTRAAERLYLSWTASRNRGQRLKPSRFLEEVLAFGRERARQAKQ
>NC_011831.1|WP_015940480.1|2102927_2104826_-|protein-kinase
MSNLHSFAHGEPWPPADQELELREYRLHEQIGQDELSLIYRATHQTLNRPVYVFILRRHDWISNSRFQLAARLAASLSHSHLLPVIDAGHDEHYGDYMVTPYIAGRSLNEILQEGPPDLTLAVRIITQIAAVLDYLHEQQVVHRDVQPANILVTPEGNAYLTNLSLAAVPDAPLDWSMLSEADYLTPYSAPELKLAQAEAHPSLDIYSLGAVAYHLLSGELPPTGMIVDLDLHDKPQACVLAERVLLRMLSPQPNLRFSTASAAANALRLALRSLLDQNTIDMEESRWEDCAEWFENPLELALSSELANLAEQFNDFLTEARKRADTFHRRDYLRKWLNRWSRQKPFRRPSLGQLIEFELIASYNIYFYTLKVLYEQRSPPQLRSRPMRNDERPVAERALDVWATPLPVHRDFTSEPGGEVILPGSRRFFTCTGCQGSGQVVCPQCQGKGVIKPKARRGEPDPVEQPCDRCKGYQRVRCETCDGNGNLVEEKFFTWSRWVVELENDDDSEDLPQQVQRLLKQQAREIYESEIDLYDSRWHSVGPLSRLIEEAIAKAGEHGRPIQAKLTIRGVMMTEISGMLDDQECRLYVIGSGENEKLVSTVSLLNLERLALVVVAVLFLVVVAITAIMLL
>NC_011831.1|WP_041470452.1|2105162_2106533_-|S41-family-peptidase
MRYISRKGVGMERVWAIVGVIVRWVAVIAVAFLGGWITGRIVGVSPIDVLITGVSNVDTRLLTPGDRRQQFAVFWDVWDLVEGNFYQPQAIDRQKMVYGAIRGMLATLNDPYTFFQEPEEAQQNRESMEGRFEGIGAYLRVENGQIIIDRPIRNSPAEQAGIQAGDIILAVDDQPLAELIAGLSDQEASARAVSLIRGPAGTVVRLTIHRPAEDRVFTVAITRAAIPLITVNSTLLPDRIAYIQITEFKATTTELLDQAIAELLPQQPRAIVLDLRNNSGGFLTTAQEVLGRFYDGVALYEEERSGVNKELRTITAPANRRLYGIPMVVLVNGGSASAAEVVAGALRDVRPNTVLLGEKTFGKGSVQNIYPLRDGSSVRITIARWLTPSGEAINGVGITPEHVVPAANDPIYQVPCVPDRPNDTGCADAQLYWALKLLRDGTPPPLPVPVETVTAP
>NC_011831.1|WP_015940482.1|2106516_2107272_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MDDPTTIPNTHRFFVDPVWLRGDEILIDDPSLLHQWTRVLRLTAGDRVLLLDGKGMAAVVQFTAIDRRRAQGYVLTRCHAGGELAVVIDLYLALIRPERFEWALQKAVELGARRIIPVAFARSLSGDRIDTHRLMRWQRIATEAAEQSGRGRLPEVSAPQPFSAAVVAGGRADLALMLDEQAEHHLRDIVTSPTSLRQIAIISGPEGGIDPRERRAAIDHGFVAVSLGPRILRAETAPLAALAMLQYALHI
>NC_011831.1|WP_015940483.1|2107280_2108315_-|mannose-6-phosphate-isomerase
MNRLYPILSEPRFVEPLWGGQRLAPWLALPPPHPERLGEIWLVFDSNRVTNGPFAGRTIAEVVQTYGEAMVGTRSFARYGADLPLLAKFIDAADRLSVQVHPDDEYAHTFEAHTGFHGKTEAWYILATEPGATVTLGVRAPVARTALAAAIADGTIEDLLAQQPVRAGDLVFVPAGTIHAINAGIMLFEIQQKSDLTYRLYDYNRRDARTGQLRELHIEQALAVSRLEPASASFFQPLPLDEQRELLVACSSFALERWHVQGCLSATTDPGSLEILTVIDGTMQLEWGSETLTLQRGAAVLLPATLGEYRVAASQGILLRSYIPDLPTLLATVGNDTGVAPIVQ
>NC_011831.1|WP_015940484.1|2108360_2109344_-|50S-ribosomal-protein-L11-methyltransferase
MQTPSTWLEISIEVEPEAVETVAEILARYGYNGGVVVEQGWIAGDEGPEFQYDPTRPVWLRTYLPFDDQVEETRQRIEHALWHVSQIRPLGPLQTRTLAEEDWANAWKQFYSVLRIGERTVIVPSWLEYQPQPDDIVLWLDPGMAFGTGLHPTTRLCLQLLERMVQPDQHVLDLGTGSGILAIAAAKLGAGHVLALDNDPIAVRVAQENVERNQVNAVVQVAEGSLGVGQAMGHWLSGDFGPAEPDPALRAQTPQAIFDLIAANLIAKVLVTLAPDLAAALKPGGYLISSGIIDIKEREVIAAFAKVGLTMVERHGEGEWVALVHRR
>NC_011831.1|WP_015940485.1|2109350_2110769_-|cysteine--tRNA-ligase
MTIHLYNTLTRRLEPLETIEPGVVRMYVCGVTPYDEAHIGHAMSAIVFDMIRRYLEFRGYQVRHIVNFTDIDDKVIARAQAMGQDPLALSGQYAAEFLTQLQAMNVLPATAYPRVSTTMPGIIAFVQGLIERGYAYVVDGDVYFRVKRDEDYGKLSGRSLDEMLSGTRFEVDPRKESPADFALWKAARPGEPAWDSPWGPGRPGWHIECSAMAMEYLGPQIDIHGGGTDLIFPHHENEIAQSESLTGQPFARYWVHNGMLQLVNPQTRQVEKMSKSLGNVVTIADFLSRYDPDVFRLIVLSSSYRSPLTYNDEIAADNQRKLERLLSALAPATGSVREGPAVAALREAATIARERFITAMDNDFNSPAALAALFDLVRAINAARDAGLAAEELAIGQQTLRELAGVLGLRLQPRQRTPTAEVTPFIELLIEVRGELRKAKQYALADLVRNRLADLGVALEDGPHGTRWKWQG
>NC_011831.1|WP_015940486.1|2110795_2111566_-|serine-O-acetyltransferase
MRISHALCVLRDDIRAIFRNDPAARNLAEVLLYPGLHAIILHRFAHALYRRKVPFIPRLISQISRFLTGIEIHPGARIGRGFFIDHGMGVVIGETAEIGDWVMLYQGVTLGGTGKQTGKRHPTVEDEVVIGVGAIVLGAITIGRGARIGGGAVVVKDVPPHSTAVGVPARIVARRDPITGVSRRVEQLPDPEGEMLRSLHDKVLELEARLIELEAVSRVHYKNFHVKHSELPEQLWQTLLDESAPVEEEYNQGAGI
>NC_011831.1|WP_015940487.1|2111748_2112006_-|FmdB-family-transcriptional-regulator
MPTYVYACDACGKQFEKFQSFKDEPLTVCLCGQEGRVRRVIQPAGIVFKGSGWYITDSRGTSSGSVTGSDKSKGDASDKTDSSED

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Crispr_ID: NC_011831_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_16

2208607-2208704

Orphan

Consensus_repeat	Method
GCAACTCAACCCTCGCCACCACCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_16

>merge|NC_011831|16|2208607-2208704|CRISPRCasFinder
GCAACTCAACCCTCGCCACCACCTGGCCGACCAGACCCAAGCAGAGCTATGAGTAACGACGGCTCACTCTAGGGGCAACTCAACCCTCGCCACCACCT

>NC_011831|16|13|2208607-2208704|CRISPRCasFinder
GCAACTCAACCCTCGCCACCACCT	GGCCGACCAGACCCAAGCAGAGCTATGAGTAACGACGGCTCACTCTAGGG
GCAACTCAACCCTCGCCACCACCT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015940558.1\|2206681_2207464_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|235664
NC_011831.1\|WP_015940555.1\|2204191_2204944_+\|aldolase	unknown	unknown	gnl\|CDD\|226356
NC_011831.1\|WP_015940557.1\|2205985_2206621_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_011831.1\|WP_041470467.1\|2221311_2221860_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940564.1\|2213964_2216913_+\|HsdR-family-type-I-site-specific-deoxyribonuclease	unknown	unknown	gnl\|CDD\|273028
NC_011831.1\|WP_015940553.1\|2201892_2202966_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NC_011831.1\|WP_049762802.1\|2211960_2213319_+\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|223804
NC_011831.1\|WP_015940566.1\|2218009_2218945_-\|intradiol-ring-cleavage-dioxygenase	unknown	unknown	gnl\|CDD\|239540
NC_011831.1\|WP_015940561.1\|2210022_2210220_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_041470465.1\|2219323_2219680_-\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227328
NC_011831.1\|WP_015940569.1\|2220188_2221028_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_157044850.1\|2200529_2200691_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940563.1\|2213305_2213968_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376616
NC_011831.1\|WP_015940552.1\|2200683_2201769_+\|inositol-3-phosphate-synthase	unknown	unknown	gnl\|CDD\|224180
NC_011831.1\|WP_015940554.1\|2202976_2204023_-\|nitrite-reductase,-copper-containing	unknown	unknown	gnl\|CDD\|131429
NC_011831.1\|WP_049762801.1\|2205724_2205967_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|224071
NC_011831.1\|WP_015940568.1\|2219792_2220134_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940556.1\|2204960_2205635_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NC_011831.1\|WP_015940551.1\|2198787_2200209_-\|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|273198
NC_011831.1\|WP_015940565.1\|2216909_2217245_+\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|320703

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015940558.1\|2206681_2207464_-\|enoyl-CoA-hydratase	gnl\|CDD\|235664	PRK05995, PRK05995, enoyl-CoA hydratase; Provisional.	1.93567e-86
NC_011831.1\|WP_015940555.1\|2204191_2204944_+\|aldolase	gnl\|CDD\|226356	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism].	3.07932e-53
NC_011831.1\|WP_015940557.1\|2205985_2206621_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.09847e-10
NC_011831.1\|WP_015940564.1\|2213964_2216913_+\|HsdR-family-type-I-site-specific-deoxyribonuclease	gnl\|CDD\|273028	TIGR00348, R_protein, type I site-specific deoxyribonuclease, HsdR family. This gene is part of the type I restriction and modification system which is composed of three polypeptides R (restriction endonuclease), M (modification) and S (specificity). This group of enzymes recognize specific short DNA sequences and have an absolute requirement for ATP (or dATP) and S-adenosyl-L-methionine. They also catalyse the reactions of EC 2.1.1.72 and EC 2.1.1.73, with similar site specificity.(J. Mol. Biol. 271 (3), 342-348 (1997)). Members of this family are assumed to differ from each other in DNA site specificity. [DNA metabolism, Restriction/modification].	2.70882e-142
NC_011831.1\|WP_015940553.1\|2201892_2202966_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	7.11289e-48
NC_011831.1\|WP_049762802.1\|2211960_2213319_+\|restriction-endonuclease-subunit-S	gnl\|CDD\|223804	COG0732, HsdS, Restriction endonuclease S subunits [Defense mechanisms].	1.2528e-32
NC_011831.1\|WP_015940566.1\|2218009_2218945_-\|intradiol-ring-cleavage-dioxygenase	gnl\|CDD\|239540	cd03457, intradiol_dioxygenase_like, Intradiol dioxygenase supgroup. Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. They break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. The family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases. The specific function of this subgroup is unknown.	2.30316e-64
NC_011831.1\|WP_015940565.1\|2216909_2217245_+\|M48-family-metallopeptidase	gnl\|CDD\|320703	cd07344, M48_yhfN_like, Peptidase M48 YhfN-like, a novel minigluzincin. M48 YhfN-like protease is considered as a CaaX prenyl protease 1 homolog, with most of the sequences in this family as yet uncharacterized. It contains the zinc metalloprotease motif (HEXXH), likely exposed on the cytoplasmic side. It is probably associated with the endoplasmic reticulum (ER), regardless of whether its genes possess the conventional signal motif (KKXX) in the C-terminal. Proteins in this family proteolytically remove the C-terminal three residues of farnesylated proteins. This novel family of related proteins consist of the soluble minimal scaffold similar to the catalytic domains of the integral-membrane metallopeptidase M48 and M56, thus called minigluzincins.	6.88393e-28
NC_011831.1\|WP_041470465.1\|2219323_2219680_-\|CHAT-domain-containing-protein	gnl\|CDD\|227328	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown].	1.67331e-05
NC_011831.1\|WP_015940563.1\|2213305_2213968_+\|hypothetical-protein	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	0.0024925
NC_011831.1\|WP_015940552.1\|2200683_2201769_+\|inositol-3-phosphate-synthase	gnl\|CDD\|224180	COG1260, INO1, Myo-inositol-1-phosphate synthase [Lipid metabolism].	0
NC_011831.1\|WP_015940554.1\|2202976_2204023_-\|nitrite-reductase,-copper-containing	gnl\|CDD\|131429	TIGR02376, Copper-containing_nitrite_reductase, nitrite reductase, copper-containing. This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. [Central intermediary metabolism, Nitrogen metabolism].	2.79789e-106
NC_011831.1\|WP_049762801.1\|2205724_2205967_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|224071	COG1149, COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion].	1.36812e-08
NC_011831.1\|WP_015940556.1\|2204960_2205635_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	2.80786e-42
NC_011831.1\|WP_015940551.1\|2198787_2200209_-\|type-I-glutamate--ammonia-ligase	gnl\|CDD\|273198	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family].	0

>NC_011831.1|WP_015940558.1|2206681_2207464_-|enoyl-CoA-hydratase
MTVLTLIRNGPVATLILQRPAVHNAFNPEVIAGITEVCKELRDDPAVRVLVLQGDGPSFCAGADLHWMQQSLLYTHEENLADAARLDAMFAALDTLPQAVVARVHGAALGGGVGLVCCADYAVAADDAVFGLTEVRLGLLPAVIARFVVARIGLGYARALFVTGRRLKAAQALAMGLVHEVVSADQLDAAVEAVVSDLLRGGPKAIAASKALLRAVRTEPLAEVRRLSIEAIAAARTGAEGQAGLRAFLKRELPPWVLNE
>NC_011831.1|WP_015940557.1|2205985_2206621_-|GNAT-family-N-acetyltransferase
MTIFTVRPAQEADIPSLARLMVALYHAELPGVLRGSRVGQERLLAYTLTANGPTALRHRYVVCDEQQRVIGTGMLQLPGEPAFERAPRGTLIAALRELGTLPTLHLVGTVARTLFGVYRHDDPHSALIHSVVIATDVRGCGAGQVLMTALEEHIGAHRLTRARLQVLASNTNAQRFYYRLGYREIWRLTGWRARLGWPSLVMEKTVAPPSP
>NC_011831.1|WP_049762801.1|2205724_2205967_+|4Fe-4S-dicluster-domain-containing-protein
MIAQPHASAVTVLPEIDRNRCNGCGICVALCPTHAVAVRDRYAVIVNANACNFCPLCETYCPQGAIGRPFTITFCTTRDG
>NC_011831.1|WP_015940556.1|2204960_2205635_-|Crp/Fnr-family-transcriptional-regulator
MSNERVAQLRRVSFCTHLPDHVVQALAMIAQPRSYQSGAVIVLAGEPPQAMYTIVAGRVKLVRIALNGREQIVNVMGAGQHFNTVPIFDHGPCPVNVQAITDVDLLVLPIDDMRRLVVEHPLLAMALLREFAGRLCHMVNLIDNIALHSVQGRLAQLLLNRAIASEQGEFVAPLTQAEMAAMIDTVREMVSRTLHQFEAQGLIRIERGAIAICDREGLAACAES
>NC_011831.1|WP_015940555.1|2204191_2204944_+|aldolase
MIDTIRQQWTSGAVVYNAWLTIPSPWSAELLATAGFPSLTIDLQHGLIDDPTALQILHTIDQRRCPVFVRLAWNEPAAIMRALDRGAAGIIAPLINGPDDARALVAACRFPPEGIRSYGPVRVGVAHGVAEPAAVARLPVLMPMIETANAMEQLEAIAEVPGIDGLYVGPADLSLSLGLPVPVDFSAPSFRAALSRIVAVCRQRGLATGIYANPDLAADLAALGFNFITIVNDGDLIMKGAVAALQTVRA
>NC_011831.1|WP_015940554.1|2202976_2204023_-|nitrite-reductase,-copper-containing
MIRRIIITLVATLLTACAAIHSPTGVQMPVLPTVAPAMEVTHDVMLPANAVPAPVGARPVQTVTVALTTREVVGYLGDGSTYTFWTFNGTVPDPMIRVRVGDTVELALTNATDSMLPHSIDLHAVTGPGGGTVATQVAPDQTKRFRFKALNPGVYVYHCATPHIPSHIANGMYGLIVVEPEGGLPPVDREFYIMQGDFYTQQAHGTQGHLTFNPVAVKDENPTYIVFNGRAGGLTGDNAMKARVGETMRLFVGVGGPNVSNNFHVIGEIFDTVYVEGGSLQNHNVQTTMIPAGGAVIIEFKPEVPGTYILVDHALSRSIDKGVIAKIVVEGEPNPSVFDAEEINTAGH
>NC_011831.1|WP_015940553.1|2201892_2202966_+|glycosyltransferase-family-2-protein
MKLIVQIPALNERDTIADVIRAIPRQIPGVDQVEVLLIDDGCTDDTVTVALAAGADHVVRHTANKGLATAYQTGIDTALRLGADIIVNTDADNQYPGSEIPRLIAPILAGKADIVIGDRQVHQLEHFSPLKKALQHVGSAVVRWASETNVPDTVSGFRALSREAALRTFVTSDFSYTVENLIQAGKRRLTIVAVPITTNPVQRPSRLHRGNWNFIKRQAAIIARTYTTYEPLKVFSYIALFFATPGVILLAWAAFVFIGRRLNILSATNDQSLLVGSVLVLMALIIFLIGLLADRVGGVRRLQEEILYRTRVNLVEQEAWRRTISARLDRIERALGVTIDDEQDETVAKDSQSPTRP
>NC_011831.1|WP_015940552.1|2200683_2201769_+|inositol-3-phosphate-synthase
MSKKIRVAIIGVGNCASSLVQGVHYYRNARDGDDIPGLMHVNLGGYHIGDIEFSAAFDIADTKVDRDLAEAIFAEPNNTYRFADVPKLGVPVSRGMTHDGIGKYLSTVIRKSKRDTDDIVRILRDTGTDVVVNFLPVGSEMATKWYVEQVLDAGCAFINCIPVFIASQEYWRRRFEEKGLPIIGDDIKSQVGATITHRVLTTLFKERGVRLDRTYQLNFGGNTDFLNMLERERLESKKISKTNAVTSQLGYELPAENVHVGPSDYVPWLGDRKWCYIRMEGTTFGDVPLNLELKLEVWDSPNSAGVVIDAIRCAKLALDRGIGGALYGPSSYFMKTPPRQFTDYEARELTERFIRGEAGAK
>NC_011831.1|WP_157044850.1|2200529_2200691_+|hypothetical-protein
MKAANLDSLPNQPHSPERFYKAVRPEYNGKPIHAAMARQSLQAIVLKGTKRCE
>NC_011831.1|WP_015940551.1|2198787_2200209_-|type-I-glutamate--ammonia-ligase
MTMDAKDVIELIKAKGIQIVDTRFTDLFGGWQHYSLPASRLTEDMIREGLGFDGSSIKGFQAINESDMLMVPDPSTAFIDPTLSIPTLVLICDIIDPITRQPYSRDPRTVAKKAEAYLKTTGIADTAYFGPEAEFFLFSDVRFGQSANQGFYYIDSPEAVWNTGAEVPGGNKGYRIRHKEGYFPVPPTDTLQDIRSEMILKMMEIGIEIELHHHEVATAGQCEIDMRFDSLVNMADKVQKYKYIVRNVARAHGYSATFMPKPIFGDNGSGMHTHQSLWKGGEPLFFDETQYALLSKTAQYYIGGILKHAPALLAICAPTTNSYRRLVPGFEAPINLVYSMRNRSAAIRIPTYSSSPKARRIEFRAPDAMCNPYLAFAAMLLAGLDGIQNKIEPPPPLDVDIYELSPEEKADIRGTPGSLNEALDALERDYHFLLKGDVFTPDLLETYIETKRKEAVGLALRPHPYEFMMYYDA
>NC_011831.1|WP_015940561.1|2210022_2210220_+|hypothetical-protein
MSDTPDYNRVIAECLVYPDKPSDELINVVQEVLTGNVTSREELQTLHRQLDKQRLLSLGRAEDRR
>NC_011831.1|WP_049762802.1|2211960_2213319_+|restriction-endonuclease-subunit-S
MKAENERVRATGRSPQRDTELGPLPEEWRVVRLGEVARQRKGFITVDETLVYKRPTIKLYGQGMVLRDNVIGASLKIKKQQVCKAYDFVVAEIDAKCGGFAVVPPFLEGAILSSHYFIFELDKEKVDPNFMSYIVKLPLLQRQVEARGSTNYASVRPSQVITYLIPLPPLPEQRAIAHVLRAVQRAQEASERVIAALRELKKSLMRHLFTYGPVAVSVGAQRAVGAQRAVPLQDTELGPLPAHWQVVRLGEVCQKSPQVVPTKAPDWQFKYVDVSCVDNSSLNIVDYQVLTGKEAPSRARKLIKAGDVIFATVRPYLKRIAIVPPSLDGQVCSTAFCVLSPKPEVDGSYLFYAVSTDEFVSSVVEYQRGSSYPAITDNDVKRGFIPLPPLAEQQEIARILQAVDRRIEVEEVSARALETLFKTLLHELMTAKRRLPQEFIARFQQEEIHVSV
>NC_011831.1|WP_015940563.1|2213305_2213968_+|hypothetical-protein
MCPYDPTRHHRRSIRLQGYDYTQPGAYFITIVTHDRTHLFGRVVDGEMQLNAWGEIVREEWFKTAQIRPYVQLQDDEFVVMPNHVHGIIWMVDDDLAPVGATDRRGDRPVAPTTTTVPPRGPAPQSLGAIIAGFKSAVTHRINTLRDTPGTPVWQRNYYEHIIRDKRVRVGAAGRSPLHAIRQYIIENPLRWHLDTYNPERTGKDSLAREIWTHPLEGKP
>NC_011831.1|WP_015940564.1|2213964_2216913_+|HsdR-family-type-I-site-specific-deoxyribonuclease
MTLASERHTVQNPLIHYAVEAGWEYLSPDDALRLRGGEEKPFLHAVLVESIQRLNPGVVTEAAQAEEIVRSLLTLRADIEGNREAWEYLKGLKTVFVPAERRERNLALLDPERPEANRFHVTDEFTFQSGARRIRADVVFLVNGIPVIVIETKAATRLEGIAEAFDQIRRYHQEAPDLMAQAQLFALTHLVQFFYGATWSLSRKALFNWREEVRANGGLPPPDFETLVKSFIAPRRVLRVLTDYILFARKDGELQKIVLRPHQMRATERVLARSYQAVTAPKAPRRGLIWHTQGSGKTYTMLTIARRLIEDGRFDNPTVLLIVDRNELESQLFQNLEAVGFGRVRLARSKRHLRELLRADTRGLIVSMIHKFDDMPANLCPRRNVFVLVDEAHRSTGGDLGNYLMGALPNAVFIGFTGTPIDRTAHGKGTFKVFGADDPQGYLDKYSIRESIEDGATVPLHYQLAPNDLIADREAMEREFWAVAELEGVAEVEELNRVLDRAVTLTNKLKNRERVDKIAAFVADHFQKYVQPMGYKAFLVAADREACALYKEALDRYLPAEWSAVVISAGHNDPPHLKRYHLSEEEETRLRRAFRKPGENPQMFIVTEKLLTGYDAPILYCMYLDKPMRDHVLLQAIARVNRPYESDDGQRKTSGLILDFVGVFENLERALAFDSQDVSGVVEGIEVLQQRFAALMEQSRQEHLTVGQNLSSPYAAKDDKLAESILLRFRDKDTREAFYRFFRELEELYEILSPDPFLRPYLEDYQRLVEMYRLLRAAYEPHVPVDKSFLRKTAEIVQQHSRTDAIHEPQATYEIGPVALLALLTEEKPETVKVFNLLKELHHLVEEQGHAAPYLLSIGERAEEVRRRFEERQIESQQALQELDELVKQLNQAHAERSSSPLSPQAFAVEWWLRTHQIAPERAIQVAQRMERAFADFPHWISSPRQESELRKVLYKAMLDAGVSDVVAWADAILNLLRRAVQ
>NC_011831.1|WP_015940565.1|2216909_2217245_+|M48-family-metallopeptidase
MRKAAGPEWLPLEQAVPIDLFRAEVEAWARTLGVTPREVRFRPMKRKWASCSSRGRLTFDTDLLRQPAEFRREVIVHELLHLKVPNHGKLFKALLKTYLALAETADFTADE
>NC_011831.1|WP_015940566.1|2218009_2218945_-|intradiol-ring-cleavage-dioxygenase
MHHEPRDRFDLGLQADLAMMQQPLLTRRRLLRLSLVGITTFLAGCTPMANPVATPTTAPNPTVAPTTAPAAAAVTAVPTTAPAATIAPTAAPTSVVVAECVDAIPRETAGPFPGNGAQGAALNVLARSGVVRSDIRTSLGSGNTAVGVPLQLELTLVRAGGDCAPLPGYVIYVWHCDAPGRYSMYSPGVEGEDYLRGVQAADTSGKVVFQTIVPGCYAGRWPHIHFEVYPSLEQATGARNVVHTSQLALPEEICRQVYADAQYGNSLRNLGQLSLERDGIFRDGWQTQMATVTGSVNDGFVARLTVGVPGV
>NC_011831.1|WP_041470465.1|2219323_2219680_-|CHAT-domain-containing-protein
MAWRTRRIIFSAHSHLAATHVSGSLTGLGGWAARLVGEYGVGALIAPLWVVNDQIAYEFARTFYTATQTPGMTLAAALRQARRQAKEAYPDDPTWLAYSLYAHPNARLTWNRASPADD
>NC_011831.1|WP_015940568.1|2219792_2220134_-|hypothetical-protein
MQQDAVAAAGRFRHLSREFAGEEALQSLAAALTGSSGATAYIAARLLGALGSSPAVIEVPGLREEIARLLSDACRHPNAQQEVYLLDSGEICSMGPLSQTLLTEPARVWGLPE
>NC_011831.1|WP_015940569.1|2220188_2221028_-|hypothetical-protein
MILGRIHCLDDAAWPAFLNLLETAAPPVQQALLDSAAWLLRLAREKTPGAAQSLVPLLDAGEAAVRTAAIHTMGYLPQPDSAVIDRLLRLFEGKRVGREEVLAAALARLVARASAELYAPVEATLRAALPDGSTAAGWVRLRVSRAGKDVDPAALLKSLQEGLSDTEALLTAFLRAGTDDDVWGEYHERVVALVRALVETDGTLLEALLLALEEALAGKEWPPTPIALAAVAACAEAMPDAPNKALRDRGQGDLLVRGTRQADSYTARRQAITALSYLR
>NC_011831.1|WP_041470467.1|2221311_2221860_-|hypothetical-protein
MRPPFLLARALVRSLEETLRHLEAIATERSAAIQESPSAELWNLLNDGLIWVRRLTIILMEGSVITAWMSLMKAWEEQRPSLADWAAAPRLRLNRERLAELDTARAQQADLLPRLDCRFPGRLTVEERERARQILSGWLPTAGTPRCLPPPSTTPRSCWPRWATSPRRPYRSSAPAWSTRPT

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Crispr_ID: NC_011831_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_17

2210656-2210769

Orphan

Consensus_repeat	Method
GCGCGAAAACCCGCGCCTTTCTGGCGTGATTGACAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_17

>merge|NC_011831|17|2210656-2210769|CRISPRCasFinder
GCGCGAAAACCCGCGCCTTTCTGGCGTGATTGACATTCAGCGATGACGGCGGCGCGGGTGACGAACCGGAAGGCGGTGGCGCGAAAACCCGCGCCTTTCTGGCGTGATTGACAT

>NC_011831|17|14|2210656-2210769|CRISPRCasFinder
GCGCGAAAACCCGCGCCTTTCTGGCGTGATTGACAT	TCAGCGATGACGGCGGCGCGGGTGACGAACCGGAAGGCGGTG
GCGCGAAAACCCGCGCCTTTCTGGCGTGATTGACAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015940558.1\|2206681_2207464_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|235664
NC_011831.1\|WP_015940555.1\|2204191_2204944_+\|aldolase	unknown	unknown	gnl\|CDD\|226356
NC_011831.1\|WP_015940557.1\|2205985_2206621_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_011831.1\|WP_041470467.1\|2221311_2221860_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940564.1\|2213964_2216913_+\|HsdR-family-type-I-site-specific-deoxyribonuclease	unknown	unknown	gnl\|CDD\|273028
NC_011831.1\|WP_015940553.1\|2201892_2202966_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NC_011831.1\|WP_049762802.1\|2211960_2213319_+\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|223804
NC_011831.1\|WP_015940566.1\|2218009_2218945_-\|intradiol-ring-cleavage-dioxygenase	unknown	unknown	gnl\|CDD\|239540
NC_011831.1\|WP_015940561.1\|2210022_2210220_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940560.1\|2208669_2209635_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NC_011831.1\|WP_015940569.1\|2220188_2221028_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940571.1\|2222023_2226388_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238121
NC_011831.1\|WP_015940563.1\|2213305_2213968_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376616
NC_011831.1\|WP_015940552.1\|2200683_2201769_+\|inositol-3-phosphate-synthase	unknown	unknown	gnl\|CDD\|224180
NC_011831.1\|WP_041470465.1\|2219323_2219680_-\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227328
NC_011831.1\|WP_049762801.1\|2205724_2205967_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|224071
NC_011831.1\|WP_015940568.1\|2219792_2220134_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940556.1\|2204960_2205635_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NC_011831.1\|WP_015940554.1\|2202976_2204023_-\|nitrite-reductase,-copper-containing	unknown	unknown	gnl\|CDD\|131429
NC_011831.1\|WP_015940565.1\|2216909_2217245_+\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|320703

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015940558.1\|2206681_2207464_-\|enoyl-CoA-hydratase	gnl\|CDD\|235664	PRK05995, PRK05995, enoyl-CoA hydratase; Provisional.	1.93567e-86
NC_011831.1\|WP_015940555.1\|2204191_2204944_+\|aldolase	gnl\|CDD\|226356	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism].	3.07932e-53
NC_011831.1\|WP_015940557.1\|2205985_2206621_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.09847e-10
NC_011831.1\|WP_015940564.1\|2213964_2216913_+\|HsdR-family-type-I-site-specific-deoxyribonuclease	gnl\|CDD\|273028	TIGR00348, R_protein, type I site-specific deoxyribonuclease, HsdR family. This gene is part of the type I restriction and modification system which is composed of three polypeptides R (restriction endonuclease), M (modification) and S (specificity). This group of enzymes recognize specific short DNA sequences and have an absolute requirement for ATP (or dATP) and S-adenosyl-L-methionine. They also catalyse the reactions of EC 2.1.1.72 and EC 2.1.1.73, with similar site specificity.(J. Mol. Biol. 271 (3), 342-348 (1997)). Members of this family are assumed to differ from each other in DNA site specificity. [DNA metabolism, Restriction/modification].	2.70882e-142
NC_011831.1\|WP_015940553.1\|2201892_2202966_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	7.11289e-48
NC_011831.1\|WP_049762802.1\|2211960_2213319_+\|restriction-endonuclease-subunit-S	gnl\|CDD\|223804	COG0732, HsdS, Restriction endonuclease S subunits [Defense mechanisms].	1.2528e-32
NC_011831.1\|WP_015940566.1\|2218009_2218945_-\|intradiol-ring-cleavage-dioxygenase	gnl\|CDD\|239540	cd03457, intradiol_dioxygenase_like, Intradiol dioxygenase supgroup. Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. They break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. The family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases. The specific function of this subgroup is unknown.	2.30316e-64
NC_011831.1\|WP_015940565.1\|2216909_2217245_+\|M48-family-metallopeptidase	gnl\|CDD\|320703	cd07344, M48_yhfN_like, Peptidase M48 YhfN-like, a novel minigluzincin. M48 YhfN-like protease is considered as a CaaX prenyl protease 1 homolog, with most of the sequences in this family as yet uncharacterized. It contains the zinc metalloprotease motif (HEXXH), likely exposed on the cytoplasmic side. It is probably associated with the endoplasmic reticulum (ER), regardless of whether its genes possess the conventional signal motif (KKXX) in the C-terminal. Proteins in this family proteolytically remove the C-terminal three residues of farnesylated proteins. This novel family of related proteins consist of the soluble minimal scaffold similar to the catalytic domains of the integral-membrane metallopeptidase M48 and M56, thus called minigluzincins.	6.88393e-28
NC_011831.1\|WP_015940560.1\|2208669_2209635_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	5.25968e-94
NC_011831.1\|WP_015940571.1\|2222023_2226388_-\|hypothetical-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.48328e-112
NC_011831.1\|WP_015940563.1\|2213305_2213968_+\|hypothetical-protein	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	0.0024925
NC_011831.1\|WP_015940552.1\|2200683_2201769_+\|inositol-3-phosphate-synthase	gnl\|CDD\|224180	COG1260, INO1, Myo-inositol-1-phosphate synthase [Lipid metabolism].	0
NC_011831.1\|WP_041470465.1\|2219323_2219680_-\|CHAT-domain-containing-protein	gnl\|CDD\|227328	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown].	1.67331e-05
NC_011831.1\|WP_049762801.1\|2205724_2205967_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|224071	COG1149, COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion].	1.36812e-08
NC_011831.1\|WP_015940556.1\|2204960_2205635_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	2.80786e-42
NC_011831.1\|WP_015940554.1\|2202976_2204023_-\|nitrite-reductase,-copper-containing	gnl\|CDD\|131429	TIGR02376, Copper-containing_nitrite_reductase, nitrite reductase, copper-containing. This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. [Central intermediary metabolism, Nitrogen metabolism].	2.79789e-106

>NC_011831.1|WP_015940561.1|2210022_2210220_+|hypothetical-protein
MSDTPDYNRVIAECLVYPDKPSDELINVVQEVLTGNVTSREELQTLHRQLDKQRLLSLGRAEDRR
>NC_011831.1|WP_015940560.1|2208669_2209635_-|MoxR-family-ATPase
MTLPSTSTDVRALAEFAGRVRANVARVIVGKGEAIDLLLIALLCGGHVLIEDVPGVGKTMLARALAVSLGLSFRRVQCTPDLLPNDLTGVSVYRPHEARFVFQPGPLFSHVVLVDEINRATPRTQSALLEAMGEGQVSVDGVTHVLPQPFLVLATQNPVEFEGTFPLPEAQLDRFFLRIRLGYPSPAEEVQMLTALAGEHPITNLTAVVAGEQVPTLQRAIYQVRVAPSLREYLVRLAQELRAHPDLALAMSPRATLALFRAGQAWAALAGRDYVLPDDYKALAGPVLGHRLLVRPAAALRGRTAEDVLAEVVARVELPLE
>NC_011831.1|WP_015940558.1|2206681_2207464_-|enoyl-CoA-hydratase
MTVLTLIRNGPVATLILQRPAVHNAFNPEVIAGITEVCKELRDDPAVRVLVLQGDGPSFCAGADLHWMQQSLLYTHEENLADAARLDAMFAALDTLPQAVVARVHGAALGGGVGLVCCADYAVAADDAVFGLTEVRLGLLPAVIARFVVARIGLGYARALFVTGRRLKAAQALAMGLVHEVVSADQLDAAVEAVVSDLLRGGPKAIAASKALLRAVRTEPLAEVRRLSIEAIAAARTGAEGQAGLRAFLKRELPPWVLNE
>NC_011831.1|WP_015940557.1|2205985_2206621_-|GNAT-family-N-acetyltransferase
MTIFTVRPAQEADIPSLARLMVALYHAELPGVLRGSRVGQERLLAYTLTANGPTALRHRYVVCDEQQRVIGTGMLQLPGEPAFERAPRGTLIAALRELGTLPTLHLVGTVARTLFGVYRHDDPHSALIHSVVIATDVRGCGAGQVLMTALEEHIGAHRLTRARLQVLASNTNAQRFYYRLGYREIWRLTGWRARLGWPSLVMEKTVAPPSP
>NC_011831.1|WP_049762801.1|2205724_2205967_+|4Fe-4S-dicluster-domain-containing-protein
MIAQPHASAVTVLPEIDRNRCNGCGICVALCPTHAVAVRDRYAVIVNANACNFCPLCETYCPQGAIGRPFTITFCTTRDG
>NC_011831.1|WP_015940556.1|2204960_2205635_-|Crp/Fnr-family-transcriptional-regulator
MSNERVAQLRRVSFCTHLPDHVVQALAMIAQPRSYQSGAVIVLAGEPPQAMYTIVAGRVKLVRIALNGREQIVNVMGAGQHFNTVPIFDHGPCPVNVQAITDVDLLVLPIDDMRRLVVEHPLLAMALLREFAGRLCHMVNLIDNIALHSVQGRLAQLLLNRAIASEQGEFVAPLTQAEMAAMIDTVREMVSRTLHQFEAQGLIRIERGAIAICDREGLAACAES
>NC_011831.1|WP_015940555.1|2204191_2204944_+|aldolase
MIDTIRQQWTSGAVVYNAWLTIPSPWSAELLATAGFPSLTIDLQHGLIDDPTALQILHTIDQRRCPVFVRLAWNEPAAIMRALDRGAAGIIAPLINGPDDARALVAACRFPPEGIRSYGPVRVGVAHGVAEPAAVARLPVLMPMIETANAMEQLEAIAEVPGIDGLYVGPADLSLSLGLPVPVDFSAPSFRAALSRIVAVCRQRGLATGIYANPDLAADLAALGFNFITIVNDGDLIMKGAVAALQTVRA
>NC_011831.1|WP_015940554.1|2202976_2204023_-|nitrite-reductase,-copper-containing
MIRRIIITLVATLLTACAAIHSPTGVQMPVLPTVAPAMEVTHDVMLPANAVPAPVGARPVQTVTVALTTREVVGYLGDGSTYTFWTFNGTVPDPMIRVRVGDTVELALTNATDSMLPHSIDLHAVTGPGGGTVATQVAPDQTKRFRFKALNPGVYVYHCATPHIPSHIANGMYGLIVVEPEGGLPPVDREFYIMQGDFYTQQAHGTQGHLTFNPVAVKDENPTYIVFNGRAGGLTGDNAMKARVGETMRLFVGVGGPNVSNNFHVIGEIFDTVYVEGGSLQNHNVQTTMIPAGGAVIIEFKPEVPGTYILVDHALSRSIDKGVIAKIVVEGEPNPSVFDAEEINTAGH
>NC_011831.1|WP_015940553.1|2201892_2202966_+|glycosyltransferase-family-2-protein
MKLIVQIPALNERDTIADVIRAIPRQIPGVDQVEVLLIDDGCTDDTVTVALAAGADHVVRHTANKGLATAYQTGIDTALRLGADIIVNTDADNQYPGSEIPRLIAPILAGKADIVIGDRQVHQLEHFSPLKKALQHVGSAVVRWASETNVPDTVSGFRALSREAALRTFVTSDFSYTVENLIQAGKRRLTIVAVPITTNPVQRPSRLHRGNWNFIKRQAAIIARTYTTYEPLKVFSYIALFFATPGVILLAWAAFVFIGRRLNILSATNDQSLLVGSVLVLMALIIFLIGLLADRVGGVRRLQEEILYRTRVNLVEQEAWRRTISARLDRIERALGVTIDDEQDETVAKDSQSPTRP
>NC_011831.1|WP_015940552.1|2200683_2201769_+|inositol-3-phosphate-synthase
MSKKIRVAIIGVGNCASSLVQGVHYYRNARDGDDIPGLMHVNLGGYHIGDIEFSAAFDIADTKVDRDLAEAIFAEPNNTYRFADVPKLGVPVSRGMTHDGIGKYLSTVIRKSKRDTDDIVRILRDTGTDVVVNFLPVGSEMATKWYVEQVLDAGCAFINCIPVFIASQEYWRRRFEEKGLPIIGDDIKSQVGATITHRVLTTLFKERGVRLDRTYQLNFGGNTDFLNMLERERLESKKISKTNAVTSQLGYELPAENVHVGPSDYVPWLGDRKWCYIRMEGTTFGDVPLNLELKLEVWDSPNSAGVVIDAIRCAKLALDRGIGGALYGPSSYFMKTPPRQFTDYEARELTERFIRGEAGAK
>NC_011831.1|WP_049762802.1|2211960_2213319_+|restriction-endonuclease-subunit-S
MKAENERVRATGRSPQRDTELGPLPEEWRVVRLGEVARQRKGFITVDETLVYKRPTIKLYGQGMVLRDNVIGASLKIKKQQVCKAYDFVVAEIDAKCGGFAVVPPFLEGAILSSHYFIFELDKEKVDPNFMSYIVKLPLLQRQVEARGSTNYASVRPSQVITYLIPLPPLPEQRAIAHVLRAVQRAQEASERVIAALRELKKSLMRHLFTYGPVAVSVGAQRAVGAQRAVPLQDTELGPLPAHWQVVRLGEVCQKSPQVVPTKAPDWQFKYVDVSCVDNSSLNIVDYQVLTGKEAPSRARKLIKAGDVIFATVRPYLKRIAIVPPSLDGQVCSTAFCVLSPKPEVDGSYLFYAVSTDEFVSSVVEYQRGSSYPAITDNDVKRGFIPLPPLAEQQEIARILQAVDRRIEVEEVSARALETLFKTLLHELMTAKRRLPQEFIARFQQEEIHVSV
>NC_011831.1|WP_015940563.1|2213305_2213968_+|hypothetical-protein
MCPYDPTRHHRRSIRLQGYDYTQPGAYFITIVTHDRTHLFGRVVDGEMQLNAWGEIVREEWFKTAQIRPYVQLQDDEFVVMPNHVHGIIWMVDDDLAPVGATDRRGDRPVAPTTTTVPPRGPAPQSLGAIIAGFKSAVTHRINTLRDTPGTPVWQRNYYEHIIRDKRVRVGAAGRSPLHAIRQYIIENPLRWHLDTYNPERTGKDSLAREIWTHPLEGKP
>NC_011831.1|WP_015940564.1|2213964_2216913_+|HsdR-family-type-I-site-specific-deoxyribonuclease
MTLASERHTVQNPLIHYAVEAGWEYLSPDDALRLRGGEEKPFLHAVLVESIQRLNPGVVTEAAQAEEIVRSLLTLRADIEGNREAWEYLKGLKTVFVPAERRERNLALLDPERPEANRFHVTDEFTFQSGARRIRADVVFLVNGIPVIVIETKAATRLEGIAEAFDQIRRYHQEAPDLMAQAQLFALTHLVQFFYGATWSLSRKALFNWREEVRANGGLPPPDFETLVKSFIAPRRVLRVLTDYILFARKDGELQKIVLRPHQMRATERVLARSYQAVTAPKAPRRGLIWHTQGSGKTYTMLTIARRLIEDGRFDNPTVLLIVDRNELESQLFQNLEAVGFGRVRLARSKRHLRELLRADTRGLIVSMIHKFDDMPANLCPRRNVFVLVDEAHRSTGGDLGNYLMGALPNAVFIGFTGTPIDRTAHGKGTFKVFGADDPQGYLDKYSIRESIEDGATVPLHYQLAPNDLIADREAMEREFWAVAELEGVAEVEELNRVLDRAVTLTNKLKNRERVDKIAAFVADHFQKYVQPMGYKAFLVAADREACALYKEALDRYLPAEWSAVVISAGHNDPPHLKRYHLSEEEETRLRRAFRKPGENPQMFIVTEKLLTGYDAPILYCMYLDKPMRDHVLLQAIARVNRPYESDDGQRKTSGLILDFVGVFENLERALAFDSQDVSGVVEGIEVLQQRFAALMEQSRQEHLTVGQNLSSPYAAKDDKLAESILLRFRDKDTREAFYRFFRELEELYEILSPDPFLRPYLEDYQRLVEMYRLLRAAYEPHVPVDKSFLRKTAEIVQQHSRTDAIHEPQATYEIGPVALLALLTEEKPETVKVFNLLKELHHLVEEQGHAAPYLLSIGERAEEVRRRFEERQIESQQALQELDELVKQLNQAHAERSSSPLSPQAFAVEWWLRTHQIAPERAIQVAQRMERAFADFPHWISSPRQESELRKVLYKAMLDAGVSDVVAWADAILNLLRRAVQ
>NC_011831.1|WP_015940565.1|2216909_2217245_+|M48-family-metallopeptidase
MRKAAGPEWLPLEQAVPIDLFRAEVEAWARTLGVTPREVRFRPMKRKWASCSSRGRLTFDTDLLRQPAEFRREVIVHELLHLKVPNHGKLFKALLKTYLALAETADFTADE
>NC_011831.1|WP_015940566.1|2218009_2218945_-|intradiol-ring-cleavage-dioxygenase
MHHEPRDRFDLGLQADLAMMQQPLLTRRRLLRLSLVGITTFLAGCTPMANPVATPTTAPNPTVAPTTAPAAAAVTAVPTTAPAATIAPTAAPTSVVVAECVDAIPRETAGPFPGNGAQGAALNVLARSGVVRSDIRTSLGSGNTAVGVPLQLELTLVRAGGDCAPLPGYVIYVWHCDAPGRYSMYSPGVEGEDYLRGVQAADTSGKVVFQTIVPGCYAGRWPHIHFEVYPSLEQATGARNVVHTSQLALPEEICRQVYADAQYGNSLRNLGQLSLERDGIFRDGWQTQMATVTGSVNDGFVARLTVGVPGV
>NC_011831.1|WP_041470465.1|2219323_2219680_-|CHAT-domain-containing-protein
MAWRTRRIIFSAHSHLAATHVSGSLTGLGGWAARLVGEYGVGALIAPLWVVNDQIAYEFARTFYTATQTPGMTLAAALRQARRQAKEAYPDDPTWLAYSLYAHPNARLTWNRASPADD
>NC_011831.1|WP_015940568.1|2219792_2220134_-|hypothetical-protein
MQQDAVAAAGRFRHLSREFAGEEALQSLAAALTGSSGATAYIAARLLGALGSSPAVIEVPGLREEIARLLSDACRHPNAQQEVYLLDSGEICSMGPLSQTLLTEPARVWGLPE
>NC_011831.1|WP_015940569.1|2220188_2221028_-|hypothetical-protein
MILGRIHCLDDAAWPAFLNLLETAAPPVQQALLDSAAWLLRLAREKTPGAAQSLVPLLDAGEAAVRTAAIHTMGYLPQPDSAVIDRLLRLFEGKRVGREEVLAAALARLVARASAELYAPVEATLRAALPDGSTAAGWVRLRVSRAGKDVDPAALLKSLQEGLSDTEALLTAFLRAGTDDDVWGEYHERVVALVRALVETDGTLLEALLLALEEALAGKEWPPTPIALAAVAACAEAMPDAPNKALRDRGQGDLLVRGTRQADSYTARRQAITALSYLR
>NC_011831.1|WP_041470467.1|2221311_2221860_-|hypothetical-protein
MRPPFLLARALVRSLEETLRHLEAIATERSAAIQESPSAELWNLLNDGLIWVRRLTIILMEGSVITAWMSLMKAWEEQRPSLADWAAAPRLRLNRERLAELDTARAQQADLLPRLDCRFPGRLTVEERERARQILSGWLPTAGTPRCLPPPSTTPRSCWPRWATSPRRPYRSSAPAWSTRPT
>NC_011831.1|WP_015940571.1|2222023_2226388_-|hypothetical-protein
MPAPDLEQILKRLAEGTLSPADGDLLHRALTEGHLLIATGDRAVAIGGSADGAVIITGDLHIQLDARRRADLEKLLASHLHNVPLLPDHYIPRETFLAPLREALLRNGAPTLGIVGVHGMGGIGKSVLVTALARDLTVQAAFPDGVIWLALGREPNLTARQEDLYLLLTGERENFKDPAQGRLFLAPALREKTCLVILDDLWELEHAEAFPLRLEGARARFLITTRNGELLQTLQAKPFLLEELTPDQALHLLAEWAGQEVSSLPPTACEVARKCGYLPLVLAMVGAFVRQNPESWERALHRLQKADLEKLRRLFPGYQHSTLLAALEVSVAALPKDARARYLDLAVFPEEEAIPLDVLRAFWGLDADDVADLAETFVGRSLARWEETGRSLRLHDLQHDYLRAVQRDTLPDLHCRFLLACARSLLGVDGQTLDGMPWQRMPAEPRYLWDRLVYHLLEAGAWEALYRLLTDFDYLEARCRATSVFDLEADYRLALARWPANDADHRNVLAAFEERLRLEDYHIAGAPEWLFPALYNHLTWPDAPDGPLHALCEAARPARRNWLRALQDPRPQPPPWLRSLEGHTSVVTAVALSPDGGWIVSGSWDRTVKVWEAATGRLLRSLEGHTGWVTAVAVSPDGGWIVSGSWDRTVKVWEAATGRLLRSLEGRTGWVTAVAVSPDGGWIVSGSWDRTVKVWEAATGRLLRSLEGHTDGVTAVAVSPDGGWIVSGSWDRTVKVWEAATGNLLRSLEGHTGWVTAVALSPDGGWIVSGSWDRTVKVWEAATGRLLRSLEGHTGWVTAVAVSPDGGWIVSGSNDKTVKVWEAATGRLLRSLEGRTGWVTAVAVSPDGGWIVSGSWDRTVKVWEAATGRLLRSLEGHTDGVTAVAVSPDGGWIVSGSWDRTVKVWEAATGNLLRSLEGHTEPVTVVAVSPDGGWIVSGSRDRTVKVWEAATGRLLRSLEGHTEPVTAVAVSPDGGWIVSGSWDRTVKVWEAATGNLLRSLEGHRWAVTAVALSPDGRFIVSGSADGTVKVWGWEAGRLLRSLEGHTRDVNAVAVSPDGRFIVSGSADGTVKVWEAATGNLLRSLEGHRWAVTAVAVSPDGRFIVSGSRDRTVKVWEAATGRLLRSLEGHTRDVNAVAVSPDGGWIVSGSSDDTVKVWEQETGRLLRSLEGHTSVVNAVALSADGRLVVSGSDDHTVKVWEQETGRLLRSLEGHTSVVNAVALSADGRLVVSGSNDKTVKVWERETGRLLRSLEGHTGGVTAVALSADGRLVVSGSDDKTVKVWEWETGRLLRSLEGHTSLVTAVALSADGRFIVSGSDDHTVKVWERETGRLLRSLEGHTGWVRAVALSADGRFIVSGSADRTVKVWEQETGRLLRSLEGHTSVVTAVALSADGRLVVSGSDDHTLRSWDLESGQSCLLFWNDTSILSLALSGDDRTLACGDKQGRVWIFEWVR

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Crispr_ID: NC_011831_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_18

2372124-2372222

Orphan

Consensus_repeat	Method
CGCAAAGGACGGTAACGCACAGA	CRISPRCasFinder

1 spacers

csx15

The CRISPR arrays of NC_011831_18

>merge|NC_011831|18|2372124-2372222|CRISPRCasFinder
CGCAAAGGACGGTAACGCACAGAACGCCACCCGTAGGGGCACGGCGATGCCGTGCCCCCCCACGCCAAGACCGTAACGCAAAGGACGGTAACGCAAAGA

>NC_011831|18|15|2372124-2372222|CRISPRCasFinder
CGCAAAGGACGGTAACGCACAGA	ACGCCACCCGTAGGGGCACGGCGATGCCGTGCCCCCCCACGCCAAGACCGTAA
CGCAAAGGACGGTAACGCAAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015940686.1\|2364513_2364786_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275025
NC_011831.1\|WP_015940693.1\|2373838_2375005_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|132443
NC_011831.1\|WP_015940690.1\|2370056_2371895_+\|DNA-mismatch-repair-endonuclease-MutL	unknown	unknown	gnl\|CDD\|234630
NC_011831.1\|WP_015940700.1\|2378108_2378885_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NC_011831.1\|WP_015940684.1\|2362735_2363206_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NC_011831.1\|WP_041471004.1\|2361252_2362488_-\|Bcr/CflA-family-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NC_011831.1\|WP_015940692.1\|2372557_2373724_-\|peptidase-C45	unknown	unknown	gnl\|CDD\|367486
NC_011831.1\|WP_015940681.1\|2359572_2360406_-\|DUF92-domain-containing-protein	unknown	unknown	gnl\|CDD\|376674
NC_011831.1\|WP_015940688.1\|2367145_2368837_-\|peptidase-M14	unknown	unknown	gnl\|CDD\|349476
NC_011831.1\|WP_015940682.1\|2360500_2360974_-\|cyclase	unknown	unknown	gnl\|CDD\|378454
NC_011831.1\|WP_015940689.1\|2369037_2370003_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
NC_011831.1\|WP_015940699.1\|2377822_2378089_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940687.1\|2364931_2366833_-\|vanomycin-resistance-protein-VanB	unknown	unknown	gnl\|CDD\|225341
NC_011831.1\|WP_015940695.1\|2375493_2376441_-\|myristoyl-transferase	unknown	unknown	gnl\|CDD\|378117
NC_011831.1\|WP_157044915.1\|2377472_2377826_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940696.1\|2376455_2376842_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182245
NC_011831.1\|WP_015940701.1\|2379034_2379958_-\|5,10-methylenetetrahydrofolate-reductase	unknown	unknown	gnl\|CDD\|236321
NC_011831.1\|WP_015940697.1\|2376838_2377135_-\|YggT-family-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940694.1\|2375015_2375402_-\|hypothetical-protein	csx15	cd09766_csx15_CAS-I:CAS-III	gnl\|CDD\|187735
NC_011831.1\|WP_015940685.1\|2363213_2363933_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|275102

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015940686.1\|2364513_2364786_-\|hypothetical-protein	gnl\|CDD\|275025	TIGR04167, radical_SAM_domain_protein, radical SAM/Cys-rich domain protein. Members of this protein family have an N-terminal radical SAM domain (pfam04055) and a C-terminal pfam12345 domain. The C-terminal region has several conserved Cys residues, one of which is replaced by selenocysteine in at least five bacterial reference genomes.	1.23477e-10
NC_011831.1\|WP_015940693.1\|2373838_2375005_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|132443	TIGR03402, Cysteine_desulfurase_NifS, cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.	0
NC_011831.1\|WP_015940690.1\|2370056_2371895_+\|DNA-mismatch-repair-endonuclease-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
NC_011831.1\|WP_015940700.1\|2378108_2378885_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	7.63927e-136
NC_011831.1\|WP_015940684.1\|2362735_2363206_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.11109e-11
NC_011831.1\|WP_041471004.1\|2361252_2362488_-\|Bcr/CflA-family-efflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.2993e-88
NC_011831.1\|WP_015940692.1\|2372557_2373724_-\|peptidase-C45	gnl\|CDD\|367486	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.	9.16691e-22
NC_011831.1\|WP_015940681.1\|2359572_2360406_-\|DUF92-domain-containing-protein	gnl\|CDD\|376674	pfam01940, DUF92, Integral membrane protein DUF92. Members of this family have several predicted transmembrane helices. The function of these prokaryotic proteins is unknown.	1.68686e-76
NC_011831.1\|WP_015940688.1\|2367145_2368837_-\|peptidase-M14	gnl\|CDD\|349476	cd06905, M14-like, Peptidase M14-like domain; uncharacterized subfamily. A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.	2.95698e-172
NC_011831.1\|WP_015940682.1\|2360500_2360974_-\|cyclase	gnl\|CDD\|378454	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport. This family contains polyketide cylcases/dehydrases which are enzymes involved in polyketide synthesis. It also includes other proteins of the START superfamily.	0.000724052
NC_011831.1\|WP_015940689.1\|2369037_2370003_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	1.35516e-72
NC_011831.1\|WP_015940701.1\|2379034_2379958_-\|5,10-methylenetetrahydrofolate-reductase	gnl\|CDD\|236321	PRK08645, PRK08645, bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; Reviewed.	9.48256e-70
NC_011831.1\|WP_015940687.1\|2364931_2366833_-\|vanomycin-resistance-protein-VanB	gnl\|CDD\|225341	COG2720, COG2720, Uncharacterized vancomycin resistance protein [Defense mechanisms].	5.68878e-64
NC_011831.1\|WP_015940695.1\|2375493_2376441_-\|myristoyl-transferase	gnl\|CDD\|378117	pfam09084, NMT1, NMT1/THI5 like. This family contains the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine. They are regulated by thiamine. The protein adopts a fold related to the periplasmic binding protein (PBP) family. Both pyridoxal-5'-phosphate (PLP) and an iron atom are bound to the protein suggesting numerous residues of the active site necessary for HMP-P biosynthesis. The yeast protein is a dimer and, although exceptionally using PLP as a substrate, has notable similarities with enzymes dependent on this molecule as a cofactor.	2.10855e-52
NC_011831.1\|WP_015940696.1\|2376455_2376842_-\|hypothetical-protein	gnl\|CDD\|182245	PRK10110, PRK10110, PTS maltose transporter subunit IICB.	0.00795761
NC_011831.1\|WP_015940694.1\|2375015_2375402_-\|hypothetical-protein	gnl\|CDD\|187735	cd09766, Csx15_I-U, CRISPR/Cas system-associated protein Csx15. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small protein loosely associated with CRISPR/Cas systems; some are fused to AAA ATPase domain, also known as TTE2665 family.	8.87762e-50
NC_011831.1\|WP_015940685.1\|2363213_2363933_-\|glycosyltransferase	gnl\|CDD\|275102	TIGR04282, hypothetical_protein, transferase 1, rSAM/selenodomain-associated. Members of this protein family show strongly correlated phylogenetic distribution, and in most cases co-clustering, with an unusual radical SAM enzyme (TIGR04167) whose C-terminal pfam12345 domain often contains a selenocysteine residue. Other members of the conserved gene neighborhood include another putative glycosyltransferase, an alkylhydroperoxidase family protein (TIGR04169), and a phosphoesterase family protein (TIGR04168). The cassette is likely to be biosynthetic but its exact function is unknown. [Unknown function, Enzymes of unknown specificity].	2.40651e-68

>NC_011831.1|WP_015940690.1|2370056_2371895_+|DNA-mismatch-repair-endonuclease-MutL
MPIRLLDETIAAQIAAGEVVERPASVAKELVENALDAGARRIVVEVRGGGLREIRVQDDGCGISAEEVELAFARHATSKLHSADDLWAIRTLGFRGEALPSIASVAQVICVTRVADAELGVELRIAGGEVQSRLPCGCPAGTTITVRNLFYNTPVRREYLRSEATETGAISAIVQQYALAYPEVSFSLVIDGRLAFQTTGDGDLRAVVVELYGLAVGRALLPVQAEVGDGELWVAVNGLISPPDLTRSSRSYLSFFANRRALQPRGALAAVVENAYHTMLMKGRFPIAIIDLRVHPAAIDVNVHPTKSEVKFRYPAHVHSVLGQAIRDALIKGSDIPVWEAPDPATAQRRFELRRLGQEQASSPATWGVGAQAWDRERAHWDVGTPVSRSEPSLLVSPVAVPTSNTAVPTPDASFATSSSALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQRAVESQQLLIPQAVELSPEASTLLVGNAEKLAEWGFALEPWGTGVLVRAIPATLPPDELTQALHEVAERLAGRGGSSPLEWREAMLITLACHTSVRAGQPLSHDEMRHLLRQLEQCVSPRTCPHGRPTMILMTPAQLERQFGRRV
>NC_011831.1|WP_015940689.1|2369037_2370003_+|serine/threonine-protein-phosphatase
MRVRYSARTDTGKRRTINQDAYGSAEVGQGTLLVVCDGMGGHLSGEVASTLAAETILTTFQPNDDPAEGLRQAFVMANRRVYEEGRGTMGTTAVAAFFCRNMLYVANVGDSRAYLVREGQIRQLTLDHSLIGDQVAAGLLTAEQARQSTIRNIITRAIGHLAHVEVDLFREPLLPGDTIVLSTDGMHGLLSDDEIAAIASMHPIEVAAQRLVDEANARGGPDNITVVVAHVDGLDPTISSQTTTGEPVVKPATNTPPSVKPLSWVGITIAIIMLIGLVGLGITVIVTDQRNPPPLLSSPTAVISPTPPVTMTVTPSPVVTP
>NC_011831.1|WP_015940688.1|2367145_2368837_-|peptidase-M14
MPTIDFTRYYRPHEVEAALQAWATEYPNLCALRSIGTSYEGRPIWLMTLTNQATGPDDEKPAFWLDANIHATEVTGCMGALHVIQTVLEQYGRDPNITALLDERALYIVPCVNPDGMEQALTSPVYVRSGTRRYPFTDDRDGLYPADVDGDGLILQMRVVDPDGGWKVSERDPRLMRPRLPDERGGTYYRVYTEGYIRNFDGYEVKIAPPTQGLDFNRNFPYIWAPEGVQRGAGPYPTSEPEIRAIVEFLTSHLNVSSAISYHTYSGAILRPYSDKPDDQMPINDLWTYKELGRRGEEITGYKHVSVYHGFRYHPRDVMRGAFDDWAYEQLGIYAFTVELWDMIGEAGIKERDFIEWFRDHPEEDDLKLLRWNDEQLDGAGFVNWRPFDHPQLGRVEIGGWIERRTFGNPPEKFLLRTLEPNTRFVLALAQTGPRLELRHVQAEPLGNELYRLQAVVVNSGYLPTYGSSKAQEVKAVQPIAVEVTLPTDGALVSGEQRTEIGQLEGRANKRALWGGSFPTDHLRRLTWTIRAPAGSSVTITARSQRAGVARATVSLGESIHQS
>NC_011831.1|WP_015940687.1|2364931_2366833_-|vanomycin-resistance-protein-VanB
MPDHRYYPEYGPIYRRRAAKGGFTPHEDSPATETRRPRPRRPLRRRSRGWMWLALALFVLIIGPVGAIYAVDLIYPNTILPGISLNGEPIGGRNRTEVIIALRQRYRAFEQQPVTLTFRDYAWQPSLTELGVTFDLERVVNSAFALGRSGDLFTRIGDLWMLWQKGIDLPLRMSVDLSQTQRYLLGIAPQIEQLPANAVLSLADARVIGQPSQPGTQLLIDATANDVLLAIQQLRPQTVAVRTRQLAPQIDDTDLVIAQQIAVNLLRSPLELVVEDQTIVWSPERIAELLQVTPVDGQLTVQVNQDRLNRAVEGLAQSIDTGTAEPRLRFSDGRVRIVAEGQPGRRLRQADAATAIADLLMQPSPITRTLVLPIDRIEPRITAATLDSLGIAELVAEGRSSFAGSAPYRITNIRAGAARMNGVLIAPGEEFSFNRQLGEVNAENGFVEGYAIIGNRTQLEWGGGVCQVSTTVFRAAFWAGLPITERHAHSFYISWYDRFGLGPNGDGQGLDAAIFTGVQDLKFVNDTGYWLLMQTSIDEQAQVLVVQLYGTRPKREVRIEGPIISNEVRAPSEPVYVDDPSLPRGTIRQTDVARNGRDISIYRIITDANGQEQRELFFTRFRPWPNIFVRGTG
>NC_011831.1|WP_015940686.1|2364513_2364786_-|hypothetical-protein
MAAIRPTPNDPLAHPRAQLRLFANIPVPLWIATQAANGVALRRVGDRMEVLQINVGRRGNQPCHHCNVADDPNRRAMMTPKMTRASTEMV
>NC_011831.1|WP_015940685.1|2363213_2363933_-|glycosyltransferase
MHQRNRSNPNSDQRAVSMLPTLVMMARRPEPGRVNTRLCPPLTATQAASLYELFLRDLVAMMRTVPNTRSLIAYAPTDAAEYFAALAPDIARRPQIGRDLGERLAAITTELLAEGTSAVVVIGSDSPSLPPTLIGQALAELERGADLVLGPADDGGYYLVGLRRIAPSLFTEVIMSTPTVLRDTLAVAERLGLGAALIEPWYDIDTIADLHRLRADPAPLPYSRPLLETLLRNLYPKHP
>NC_011831.1|WP_015940684.1|2362735_2363206_+|GNAT-family-N-acetyltransferase
MQPIELRPAQPGDTPLLRQIAVAAKSYWGYPASLIAQWAATPIITPAAMARDRVCLAACAGTPIGWYRLALDRSPAWLDDLWVIPAWIGRGVGRLLLSDAIAACRARGIAQMELEADPNALGFYLRMGGVVIGERISEWNRPVPLVRLDLPSDTLS
>NC_011831.1|WP_041471004.1|2361252_2362488_-|Bcr/CflA-family-efflux-MFS-transporter
MSTLPSQSSPRMGEFIAMMALMTSLVAMSIDLMLPALSSIGHELGAPHANANQLVVTMVFVGLAIGQLLYGPLSDSIGRKAAIYLGFTVFIIGSVLTIIAINFPMMLAGRLLQGLGVAGPRGVSMALIRDRFSGRAMARVMSFIMVVFIIVPIIAPAVGQAILLVAAWRMLFVTLLVLGIVSLLWFGLRQPETLPAAQRTPLSPQRIGRAFREVVSHPIALGYTLMAGVISAILQSYLSSAQQIFQEQYALGTLFPLFFAGNALAIGLASFVNGRLVMRYGMRSLIGNALLVLIGLTITLAGIAVVTHGQPSLWVLMAALMPSFFCLGILFGNMNAMAMEPLGHVAGTGAAVVGSLSTFVAIPIATIIGQAYNGTITPLALGFAVLALSAFGLMRWADGRQHRVVDPESVA
>NC_011831.1|WP_015940682.1|2360500_2360974_-|cyclase
MIKVGRRCHIEGVTPEQVFTTLANPELISKILPRVQKTELLDRDDVARHARLITYMSMGSLFGTIRCEGDLTWQDNREIVFIVRTPLPVETRWVLSQAVNGTDLQVVMGIDLAPMLGMMASFVPEKTVADMLGADLETALRGVARHTRQSLSVRAAA
>NC_011831.1|WP_015940681.1|2359572_2360406_-|DUF92-domain-containing-protein
MIDLVQIGLGFVLSIAIGGVAFARRSLSESGWVGAVLVGTLTFGFGGWPWGLTLIVFFVTSSVLSHYKESIKERRAAEKFSKGGRRDFFQTIANGGLGALCAVAYALSGQPWWLLAAFVGLMATVTADTWATELGVLSPHQPRLITTGQPVPPGTSGGVTLMGTSAAAAGGLLIGMTMFLLNLLVAQDSSPPWWMIIAGVIGGLGGALFDSLLGATVQAIYVYPDGRETERRIARDGTPNRFLRGWRWMDNDLVNLISSLGGALIAVVIALIAGGAR
>NC_011831.1|WP_015940692.1|2372557_2373724_-|peptidase-C45
MFPVITVAGEPFERGRQYGAATARQVRHSIASYARLFAYRRGLDWAAVQREALAYEPLLAEIAPDLLNEMYGIAEGAGYTPAEIIALNVRTELLAGVGVGVHHPEAAVVLARNRAAGVPFHAELPLNDYGMAGEDGECTTAAAAPPATANGRVWLAQTWDWQGDQRAACVLLRIETPGHPPILTLTEAGMVAKIGLNGSGVAVGLNLLRSRADGQHRGMPVHVLLRLMLQSTSVAAARRLAELLPAGGSSCITLAGAAGELLALEITPGGVAELPAREGLLAHANHCLDANAAAGECALEPTSTSRERYGRAWDLLQVAAGQIDLVVLQNILRDHEGAPRCICRHPDPRIAAVDRNESVCGVIIDVQAATMHVAANVPCLATFVPVQL
>NC_011831.1|WP_015940693.1|2373838_2375005_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MPEHLLYFDYAATTPLDPCVLEAMMPFLSGMSGNASSIHQVGRAALQALDDAREQVAFVLGCQPKEIVFTGGGSESINLAIKGVAMALRAHGKTHVISSAVEHHAVLHAIDYLVEYEGFRATLLPVDRSGRVNPADLSAAIRHETALVSVMYANNETGVIQPIAELAAICHEHGVLFHTDAVQAPGQLPLDVQALGVDLLSLTAHKFYGPQGVGVLYMRRGTPLVPQINGGAQERRRRAGTENIAGIVGLATALTIAERERAQYVHQLRTLSERLIGGVLQRIPHSWLNGDRTCRLPSIVNLGFACIETESLLLLLDQRGICASSGSACTSGSLEPSHVLLAMGLSPEEANGSIRFSLGRHTTAEQIETLLELLPDLVAQLRAVAPCA
>NC_011831.1|WP_015940694.1|2375015_2375402_-|hypothetical-protein
MIVLNYAHPITTAQQEQIVALTGQSIAQLIDINSQIDQQQPLEPQIIALADAAGLTPQQWQSEEILINLPSLNFSAAALLAELHGRMGYFPPVLRLRPIAGALPPRFEVAEILNLQVLRDEARARRTR
>NC_011831.1|WP_015940695.1|2375493_2376441_-|myristoyl-transferase
MSTPITLALDWTPNTNHIGFYVAIAKGWYRDAGIEPIMLSPEEDNYQTTPAAKVVAGRALLAIAPSESALSYHLHPTKPSLVAIAALAQRDTSAIVTLANSGIDRPAKLDGRRYASYNARFERAIVAQMIRNDGGKGEFDEIFPPKLGIWETLLTSVADATWVFMPWEGVQARRAGIALNAFHLDDYGIPYGYTPILLAHPDALRTHPDALRALLNATAEGYRFAVHHPDEAVAALITEAKHPSLQDRDFVTESLYELAPALLTADGRWGVMDGQRWQAFVTWLDQQGLIVDRNGQRIPLAPDTYLALFTNELWN
>NC_011831.1|WP_015940696.1|2376455_2376842_-|hypothetical-protein
MSDRLMTIVGWLLIAMLSGLILAGIVLWLIWQRLRSLQVPPDAGFFTTMHYIPIALPIVLDLLDFGLDILAMPVSWLILDRLGLRGLRNKAAIEAFIPFTQPIPVFTLGWLIARLTGVGKTVITEQST
>NC_011831.1|WP_015940697.1|2376838_2377135_-|YggT-family-protein
MKFGSTAQWREIIAILGGTLCGLLIVRLVLKLLAARPASPIVAWLYGLTEPLVTPLTIIDRSQPRFGAVLEFSTLTTLLLIVSVTALLWVGLGPRKSG
>NC_011831.1|WP_157044915.1|2377472_2377826_+|hypothetical-protein
MIGIELCLLVSAVGWLLSATPSRTPLSANPDLTPLVDEIRGRMSGEIVDPLIEVKPGITIRVSNIRGFRYAGSIYYYYIEGAPNYDPLSRGIIRPDQVEIVLRETSGAQTIVLYRVY
>NC_011831.1|WP_015940699.1|2377822_2378089_-|hypothetical-protein
MTLEEELIAALASSDRERAKTIAAALHARGIDAVAIEAALATQPQLEEQLWAVLQEVIPIARRVLRRRAIRAAEERDWGDWDEGRRRF
>NC_011831.1|WP_015940700.1|2378108_2378885_-|type-I-methionyl-aminopeptidase
MPIILKSPAQIELLRTAGQLVRQTFNVLREHIRPGVTTAELDAIAEEFIRSHGAEPVYKGYVPAGRRNYVPPFPGTICASINDVICHGIPSKRDRLRQGDIVGIDIGLRLNGWIGDACETFAVGEVDEETQRLLDVTRRCLELGIEQARVGNPLRAIGAAIQRYAEANGFAVVREYTGHGLGRDLHEEPTILHYDDPRQTRKIVAGMVFTIEPMINVGTAATKVDRDGWTVRTADGKRSAQFEHTLAITDEGPIILTA
>NC_011831.1|WP_015940701.1|2379034_2379958_-|5,10-methylenetetrahydrofolate-reductase
MHSTLQRRLAAGQTVVTGEIAPPKGAARAHLETLAQNLRTYVDAVNLTDNQRGIARMSSLGGSVILHQLGIEPIMQMTCQHRNRIALQADALSASALGVRNLLAMTGDHPRIGDHPEAKNVLDLNSFQLIRMLRTLRDQGTFQSGTPLKEAPRFFIGSVANPNVERAARLEKKIEAGAEFVQTQLIFDVNRFRQWMADVRAAGLHQQAYILAGVMILRRPQSAIYLRDHLPGTLMPDVIVERMQRATDSEAEGIALAAELVTELLSIEGVAGVHLMSVDWTRAIPRVVERAGLLPRPPAPEASADEA

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Crispr_ID: NC_011831_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_19

2482025-2482109

Orphan

Consensus_repeat	Method
TCTCCGCGCCTGTGCGTTGCGGTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_19

>merge|NC_011831|19|2482025-2482109|CRISPRCasFinder
TCTCCGCGCCTGTGCGTTGCGGTGTCAGTGACAACAGCATCTCGGTTGCCACGCCGACCATCTCCGCGCCTGTGCGTTGCGGTGT

>NC_011831|19|16|2482025-2482109|CRISPRCasFinder
TCTCCGCGCCTGTGCGTTGCGGTGT	CAGTGACAACAGCATCTCGGTTGCCACGCCGACCA
TCTCCGCGCCTGTGCGTTGCGGTGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015940774.1\|2488149_2488830_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NC_011831.1\|WP_015940773.1\|2486507_2487914_-\|cytochrome-c	unknown	unknown	unknown
NC_011831.1\|WP_015940758.1\|2467658_2468780_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340838
NC_011831.1\|WP_015940776.1\|2490546_2491356_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181249
NC_011831.1\|WP_015940762.1\|2473315_2474170_+\|BtpA/SgcQ-family-protein	unknown	unknown	gnl\|CDD\|223511
NC_011831.1\|WP_049762829.1\|2478035_2481050_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|237425
NC_011831.1\|WP_015940761.1\|2472323_2473298_+\|carbohydrate-kinase-family-protein	unknown	unknown	gnl\|CDD\|223598
NC_011831.1\|WP_015940775.1\|2489071_2490214_-\|permease	unknown	unknown	gnl\|CDD\|223773
NC_011831.1\|WP_015940759.1\|2468770_2469703_-\|initiation-factor-2B	unknown	unknown	gnl\|CDD\|224105
NC_011831.1\|WP_015940767.1\|2481212_2481593_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|239942
NC_011831.1\|WP_015940763.1\|2474551_2475340_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940771.1\|2484669_2485200_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NC_011831.1\|WP_015940760.1\|2469793_2472199_-\|response-regulator	unknown	unknown	gnl\|CDD\|236901
NC_011831.1\|WP_015940764.1\|2475440_2477051_-\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|366353
NC_011831.1\|WP_015940765.1\|2477511_2478039_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940770.1\|2484344_2484668_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940769.1\|2483207_2483771_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940777.1\|2491618_2493211_+\|Pyoverdin-chromophore-biosynthetic-protein-pvcC	unknown	unknown	gnl\|CDD\|213700
NC_011831.1\|WP_015940772.1\|2485304_2486504_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940768.1\|2482112_2483042_-\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273465

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015940774.1\|2488149_2488830_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	4.00917e-34
NC_011831.1\|WP_015940758.1\|2467658_2468780_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	1.22817e-100
NC_011831.1\|WP_015940776.1\|2490546_2491356_-\|enoyl-CoA-hydratase	gnl\|CDD\|181249	PRK08139, PRK08139, enoyl-CoA hydratase; Validated.	2.61825e-152
NC_011831.1\|WP_015940762.1\|2473315_2474170_+\|BtpA/SgcQ-family-protein	gnl\|CDD\|223511	COG0434, SgcQ, Predicted TIM-barrel enzyme [General function prediction only].	4.474e-86
NC_011831.1\|WP_049762829.1\|2478035_2481050_-\|GAF-domain-containing-protein	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	5.35011e-52
NC_011831.1\|WP_015940761.1\|2472323_2473298_+\|carbohydrate-kinase-family-protein	gnl\|CDD\|223598	COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism].	7.64327e-59
NC_011831.1\|WP_015940775.1\|2489071_2490214_-\|permease	gnl\|CDD\|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	3.2953e-19
NC_011831.1\|WP_015940759.1\|2468770_2469703_-\|initiation-factor-2B	gnl\|CDD\|224105	COG1184, GCD2, Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis].	1.30924e-47
NC_011831.1\|WP_015940767.1\|2481212_2481593_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|239942	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.	1.68888e-33
NC_011831.1\|WP_015940771.1\|2484669_2485200_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	1.68019e-26
NC_011831.1\|WP_015940760.1\|2469793_2472199_-\|response-regulator	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	8.03717e-82
NC_011831.1\|WP_015940764.1\|2475440_2477051_-\|SH3-domain-containing-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	7.49694e-35
NC_011831.1\|WP_015940777.1\|2491618_2493211_+\|Pyoverdin-chromophore-biosynthetic-protein-pvcC	gnl\|CDD\|213700	TIGR02310, HpaB-2, 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component. This gene for this monooxygenase is found within apparent operons for the degradation of 4-hydroxyphenylacetic acid in Shigella, Photorhabdus and Pasteurella. The family represented by this model is narrowly limited to gammaproteobacteria to exclude other aromatic hydroxylases involved in various secondary metabolic pathways. Generally, this enzyme acts with the assistance of a small flavin reductase domain protein (HpaC) to provide the cycle the flavin reductant for the reaction. This family of sequences is a member of a larger subfamily of monooxygenases (pfam03241).	0
NC_011831.1\|WP_015940768.1\|2482112_2483042_-\|cysteine-synthase-A	gnl\|CDD\|273465	TIGR01139, Cysteine_synthase, cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family].	2.12049e-177

>NC_011831.1|WP_015940767.1|2481212_2481593_+|single-stranded-DNA-binding-protein
MRSFKGTMNRVELIGRLGADPELKQVGNGVTVCRFNLATNRPGGNDDQGHRTSETEWTTVEAWERLAEVCGNYLQKGRRVMVMGSLRTDKWQDSESGQMRWRTYVRADEVIFLDGGVGRQEEGDEE
>NC_011831.1|WP_049762829.1|2478035_2481050_-|GAF-domain-containing-protein
MTNQDTPSDQSAVTSPIATILALSKAVLSSLELPDVLQRVLVATRDLSGADVVTIWLLDEQGEWLTSAAILGLEDRPERERIFRLRVGEGIAGWSVAHRQILQITNPLHDPRYVPKLDRHPAIILSIPLIVRAQCVGALSLSRYTVATPFSQEVIETISIFADQAAIAIDNATKAQILRYATARERILAHSTESTQAETLILAELAVVLGVEPLLISTTYDGNLLDHAGHNVHYDDLNRWRNEGALITDLRFDGLPAWLVVNQPGRYWSKEDTNLLAFAANQLMRARQRAFEQRAHARAEALHRLVALTNARIDQASVLDQILAELQRFIPFDSACVFVVHDDEYVRLIAQRGLRTPVDQVTLFAGPGSTIYDLRQVGTARYHPDVQQLPGWQKVPDSEIIRSWIGVPLRVDQTTIGFLTIDKWIPNAFTAEDVGTAQMFGEQVAAVINNVRLLREAQERASQFQVLQQFTVRIGAVRDIDQLLDEATQLLHRTFGYYQVLISVIEHDQLIVRAAYGRLMHCQSSEQVFPPLPCDVGISGWVIRHAQPAIVNDVLRDERYVCHPFLPATAAEMIVPILVDERVFGVITIESDVRGVFAQSDLDLVTAMAHLIGVTIANLQHDAELQRAREQLIERDRLRALGELSSGVAHDFNNLLASILGHVQLLLNEYHDPRLQEGLRAIELAAIDGAATIKRLQGFAQTSQSTPQGAVDLNQVVEESLALTRPRWRDEAQSRGIVIEVRTDLEPLPIITGDAPALRELIINLVLNAIDALPNGGTITIRTTPAPPEVFGAAGVLLVIQDNGVGIDPALHERIFAPFFSTKGVRGTGMGLAIVRGIVQQHGGRITLESEPGKGTMFQIWLPVGQPPELPTSSSQPSPMVPLHILVVDDETAVRQVLTRILERQGHRVVEATSGEEALAQYRPGRYAIICTDLGMPGMSGWELASRVRQIDTTVRIVLVTGWSEQVDPADMQRYGVNAILAKPFTIQSVQNLIASLVDAAEQV
>NC_011831.1|WP_015940765.1|2477511_2478039_-|hypothetical-protein
MKTHNFWLQSLRSVRRWLLGGIVIIAAITLWVVDRPLAEPFPLSADAVLVVATAPPTVEMSAQLADLLNTGAVPVAYLAGPNTEALVIELNRRGVSYERLRILDDTDQLLSTAHTSGLRRLMIAAPFSHRLMFVRQAQTMGFAVAALDSGAAPTLSERVTAALLYWRMLLLWRAF
>NC_011831.1|WP_015940764.1|2475440_2477051_-|SH3-domain-containing-protein
MIELQHDQSGDLLPLELQRLRQRAVHHRSRHRQRSRPFATIVAFVRTSLDLQQRLNRLPSRYLFHAVIALFLPVALLLGQLPLRPVKPIPVQPTAAPVAPDGDVPLIMLGPINLDQTRTGEVVGDPPLSADESLPVPLTILSRSEINAPLIVPATVTADVAKVRNGPGLAYDDIARLNGGTTIEVVGRHNEWLQFRTTDDPTLRWIAAELVDLPEAIFYNLKPVDESTIPPPPPPKVAIVREDGLNLRDGPGTNYVSMKRLTAGEELNLVEQYNGWFLIETGGIYGWVTSEFLNIAPGVIERVPVASSIPDPNPPLVGSVLENSVNLRKGPGSAYERIGSINAGADVKLLARHKDWYRVELSNGTRAWIYSELLGVTPMAARRVPYTNDIPPLPNRARLANSGPVNIPASGDVASYAVQFVGYRYVWGGASPRTGFDCSGLTWYVYRQFGVNLPRTAASQFNSRYGAVIGNLNNLAPGDLMFFANTGGGRGITHVAIYIGGGQMVHAMTPAYGVQISSIWGAYWTSRFVGAIRPYR
>NC_011831.1|WP_015940763.1|2474551_2475340_+|hypothetical-protein
MTVVLAATHHDPDGRLYPQMVRVVPTLQQYFDGIAILLTPTSATETQAWLARSEVALHVAPPDAPIGHRHLGRWRRGAVQTALTTFANAEWLLFCDLDRVLHWAEYWPDEFATTLAALPEADLTVLGRTARAFYSHPRAQVLPETIVNEVFARMTGLAWDVMAAARGLSRRAADLIVTASRDDSIGADCTWLLLAQRAGLQLAYRETEGLEFETLDRYQDEVAALGGPQAWLDRFDANLNNWLLRLELAYTVVESCRQQMNE
>NC_011831.1|WP_015940762.1|2473315_2474170_+|BtpA/SgcQ-family-protein
MPPLWKEQLDRLRLRDLREIFRTAKPVIGMVHCWPLPGAPGYTGYGMQTIIDHAIRDAEALAEGGCDGLIVENMWDIPFRAGPHVQPESIAAQAVVAYAVRQAVPELPLGLNLVHNGGVALLGMAIAAGASFIRVCMFTGAGVWDAGSWDEGCAADLMRRRKELHAESIKIFADVDKKHSVRFPGIDLATHIEWTRFFGADALIISGRMTGDAPDLAKVEQARSLAGDTPILLGSGTNEQNIAAFMRIADGVIVGSSIKQDGEITNPVDVNRVRRFVMAARSAD
>NC_011831.1|WP_015940761.1|2472323_2473298_+|carbohydrate-kinase-family-protein
MDVDTRRVVTTLGDINVDLGFMLPHFPREGDDNPATTVHWGGGGSGLNMAVAVGRLGATPYVIGRVGNDLAGSFVLQTARAHGVQVSAVQVDPVAATGLCGIVVTPNGQRSFMSFRGANVYCDASTVTSSLIRSSRILLVGAHALLDDPQRSAALQAMELAIEQGCAIALDLCLPAVRMVRRLIVRLLPQLWLLTMNEDELRALLPGQSTSQALDSLIGSGVRHVAIKRGAQGCSVASADGGRLDVLPPAVSVVDTTACGDAFSAAYAWALAHGLDLSESATIANLMGALTATRHGAVEAIPKSDDIRSRLSTAICERLWPVNG
>NC_011831.1|WP_015940760.1|2469793_2472199_-|response-regulator
MEEILVIDDSEQVGRMLASSVLPELGYRATIALTGKSGLDRLRARQPDLILLDLQLPDMNGLDFLRILTQEGIDVPVILMTAHGSEMIAVEAFRLGARNYLIKPFSDAEAREVIDQALRERRLQRERDRLLSLLQQRVQELTVLTRVGKSVTTLMDQRQLLDRIVEAAVYVTQAEEGILFERAAQEDRLLLRAWRNLAVQPPDNLHLNTALAGQVVRSGKALRLSSAVTGEPITIMPSVTVQATLQVPLQLGDRVIGVLAVNNRRTGRVFSESDQSLLSALADYAAIAIENARLYQAVRSSEARYRTIFANASDMILMLDTDWRIVSSNQSGAQILNVTLDELIGQPLQRWCLPEEWPTIAQTLQRVAAGQQSLPFTVSFQRPSNEFAIVEMSAQRLEVDDQVMIACIGRDLTERRRLEQQLIQSDKLSALGQLVAGVAHELNNPLTSVSGYAQLLLRKRALDEDTRSDLEQIHQQADRAGRIVRNLLMFAREHKPERSVVQINDVVQRALALQVYQLRVDNITVQLELDPQLPKTVADPHQLQQVLLNLITNARQAMTERGGGTLTIRTALCDTTDGPHIEIVVADTGIGIPAQYLDKIFNPFFTTKPVGQGTGLGLAICYGIIKEHQGQIWAESREGVGTRIFIRLPLIETHDEVPEEPPPPELTESGPSQRVLVVDDEESVRRMLDRLLKELGHEVTTVGDVDTALNELALHPYDIVITDVRMPQKSGFELKDAISQTHPHLAERIIFISGDTLNSLKPQQKEQLQDRLLSKPFSILQLAELLRNLPPKRMINSSNHV
>NC_011831.1|WP_015940759.1|2468770_2469703_-|initiation-factor-2B
MDPFIARSVAAIAADTVSGAVEIAKKCAEVLARAVRSRPMSNRVDVQHEVLTVGRALMRSHPTVAPLVNLVNSLLWRLEEAGDSESAIRLVDETTNDFRRRLHVHEAAIAETTLRLIGEEARILTIGRSTTVRAALRHAHRAGRRPRVICTESRPLGEGRMLAGELAASGIHTTLIADASAATQVAQCNLVLVGADLISSDGLINRVGTYPLALAAQAAGVPIYTLCSSEKLLPLGYRLPTQSIQSINQLWTEAPPGITVHTAYCDRTPLDLLTGIISERGIAPPVGIEAWLAATHLHPLLRNGLDEPHS
>NC_011831.1|WP_015940758.1|2467658_2468780_+|glycosyltransferase-family-4-protein
MIRFAIDARLNAYRQGGIAHYTQSLVRAMVPLLADEEELLVLEHVRAHMPLVNGLRRSRLLTPPHHRFEQLSLPVEVWLRRPMLLHSPDFIPPLVHSWRTVITIHDLAFLYFPEILDRAARRYYSRIYQAVAGADAIIAVSQATRDDIVERLGVPPERVSVIYEAADDDFRPLTIPAGTTRIIDGQTLIADTFLLFVSTIEPRKNIPTVLQALRICCDRRPSAGYRLVLAGARGWLDEPILAQIGELGLSDRVIRIGFVGREDLRWLYAACRIYLNPSRYEGFGLPALEALACGAPAIVSDTSSLPEVVGDAAWLAPPLDPLTWADLIEQLWHDEAARSDLSRRGPRQAARFSWQTTAQQTLALYRRCIRHHE
>NC_011831.1|WP_015940768.1|2482112_2483042_-|cysteine-synthase-A
MARIYNSITELIGNTPLVRLNRVNDTHATVVAKLEFFNPAGSVKDRIGLAMIDAAEREGLIRPGETVIIEPTSGNTGIGLALVAAARGYRLILTMPETMSIERRKLLRGFGAELVLTPGSEGMRGAIARAEELLAEIPNSFMPQQFKNPANPAIHRATTAEEIWRDTDGQVDIVVGGVGTGGTLTGIGEALKPRRPSLRIVAVEPEASPVLSGGKPGPHKIQGIGAGFIPDVLNTSILDEIQQVSNEDAFAMARRLAREEGLMVGISSGAAATAALRVARRPENAGKLIVFIVPSNGERYLSTPLFAEE
>NC_011831.1|WP_015940769.1|2483207_2483771_+|hypothetical-protein
MRGRAIRPVDRAGGGEEAVRLTRCAGTWLADPPDAAEQARIAAAVRAVSEQRTLALELHRDQAALDAYCIELFRDPIFDPLHIGPAVIRRIIDKLGEPPVDDEANTTAFSEYLQRAVLLFALPNPRRLLAAQLRRYLPRFTEVGDWKAAVAIDYSAFRTSLGNEVTPFLAQMTLAGLADYYDELPEA
>NC_011831.1|WP_015940770.1|2484344_2484668_+|hypothetical-protein
MTHPIHDPHPHIHSEHCGHLRILHNGHVDYLHDGHLHHPHEGHYDEHVIAVSSDNPAGCAPIACQCGHEGCGHPLVPHGDHFDYLVNGRLHHRHGDRCDDHGPLTVL
>NC_011831.1|WP_015940771.1|2484669_2485200_-|transcriptional-repressor
MIHSIINESERTYDIPTDNRMTDCHNTIISLSTTDWEQRITAALREHHIRLTQPRRAIIHWIACQPHVFSTEALAAALAPPPTRVSRATAYRMVDYLREQGWLTRIRTERGLYAYARTLPGHYHHAICRRCGATLLIDGCAILDELNVVLARHGFRVQHHLLELTGLCWRCQAYKQ
>NC_011831.1|WP_015940772.1|2485304_2486504_-|hypothetical-protein
MNVGEMLKMMRDPLGAPFYPPALQVLLVVTWVLHIFFVTLALGSSLYAIWGFLRPTDYRLRLARVAARLTPNAVGLGIVTGIAPLLFVQTIYDPIWYASNSLTGFWSVSFIFVVMGGYSLAYLFYLKGSPDGKLLWSAVASFILLFFAGWIMHVLAAVSIRPERWMEWYAPNGIIDTRGIIFHAWNIPRLVFLLPLQACLSLAVTLTLFGWYFRRSEEDAPFIQWVANLGRKLGLVISPIYALAGLLWAMTEGVEFGIGWQVGITLVGIGVALTGYFFWLRQPIRHAPRTLLVWIGTLVVVGMVREAIRVVSLARFGYSVATYPYAFDWGSIIVFTVTTIVGVAVLAYLIMVMYQSGGVKRDAQISPRVERLGTIATGMLGAWFGFFLLVGLYATFLLR
>NC_011831.1|WP_015940773.1|2486507_2487914_-|cytochrome-c
MYPIWEGIFIHSAMYVAIVSAFHVLASHLTVAAAWFNLYLERRAVYEKRPELYEYLRRSALGLLVFAYVFGAMAGVGIWQTTTAANPRGISTLIHNFVFYWGAEWYMFLIDVVGIIAYYYSFGRIDPKTHLRLAWILALGGTGTLSIIVGVLSFKLTPGLWLDTGVSLNGFFNPTFWPQIFLRFALMFPITAAWALLIVTGMPKTYPEREPIIRNAALMGLGGLAVALAIFVFWFYPVLPEHAKIIMRTRAIPPITYTVILGGIAATFAGLLFAWRFPQRQQRLIALGALFVLFAAIFGAERTREVLRKPDIIAGYMSSNQLVFNDLPARSIQSEEQRLNETGMLGSLPFLPRPDQIVLPANSGLPNQTIAVGRTLVMQQCASCHNVSQQTALIGFNQRLALRSLADLLYLRRATTADLIKSRIRAIGGFQYMHPVVGTEEELSAMAQYLEYFVQQVHPSQPQVVTQR
>NC_011831.1|WP_015940774.1|2488149_2488830_-|Crp/Fnr-family-transcriptional-regulator
MNSDTLSHSRLLTGLASNDIAVIMRFAETIQVKRDTQLFADGDPATHLYLIVTGQIRLYKLTPTGRQSVFRIAEAHEVIGLSAIVSESRYTLYAQSISAGHMLAWPTLMFQSLMQQFPQLQRNAMQLLSEYREDLQDQLLEMATNDVEIRLAKALVRWMKRHCDMACPAPLTIPLLQRDLADLIGASPYTISRLLHQWQEEGLVQVQHGRLIVSDRQQLFAKAEVL
>NC_011831.1|WP_015940775.1|2489071_2490214_-|permease
MRRMSVCTRLEGVLPLLSLIVLLAIIGQVVMQSVITWATGNELSQIVPVFEAPIANAGKALGALLTAWMPRWIIATPFGPLDIKYTVAYTIYEWFKLPIILFLTTFGMMLLRLGVSTVWLERTLGRNDVIGILGGTLLGMVTPVCSCTVTNIYAGLAAGGASRRASAAFLFASPALNEFAIIFMFVIVGPLGGGVYVVAGVIAAIITGYLAPVLGLDPHRFLQPILRSPFHDSLDRSNILIRAHQEAWALFKRLIGIVLFSGLLAGILVNFNLTLVEALKQAGSVWWGPILATVFGLPLDINAASTAPTLVALHQIVPLGTLVSAMMATTVSSIPEWAMLNRLLGRAAASKVVLWYGLYVIGLGLLLNWLFGYRMVMTAA
>NC_011831.1|WP_015940776.1|2490546_2491356_-|enoyl-CoA-hydratase
MQAGETAVEPYVLCETDSRGVARITLNRPRQFNALSEEMLAALQAQLDAIATNPHVRVVVLAGAGKAFCAGHDLKQMLAHPDQHYYEDLFARCSQMMLTIQRMPQPVIARVHGIATAAGCQLVAMCDLAVASSEAKFAVSGINVGLFCSTPSVALSRNIGRKAAFEMLVTGEFIDAETAHHLGLVNRVAPPDQLDATIEQLVDAILSKPAESIAIGKSLFYRQIELPMAEAYQLAGQTMACNMMEPCAQEGVTAFVEKRPPVWANSENR
>NC_011831.1|WP_015940777.1|2491618_2493211_+|Pyoverdin-chromophore-biosynthetic-protein-pvcC
MTVSEVTAETAIGGVRPMNGREYLESLRDDRVVYFQGERVKDVTTHPAFRNSARMVARWYDRLHELHQEDVARGDPDQWKWTMPTDTGSGGWTHPFFVGSRTVEDLVRARDTIAELQRAVYGWMGRAPDYKAAFTGTLGANAEFYAPYQENARRWYRKTQEELIYWNHAIVNPPIDRNRPPDEVADVYMHVERETDAGLIVSGAKVVATGSALTHVNFIAHYGPLPIKEKRFALIFAVPMNAPGVKLIARTSYEYNAAVVGSPFDYPLSSRLDENDSILVFDRVLIPWENIFVYGDIEKVNTFFPISGFGHRFPLHGGTRFAVKLDFITGLMLKAVESTGVAEFRGVQARLGEIVTYRNLFWHLTEAMVRNPMPWVDGYLLPNLEAAFAYRVLAPDAYVKIKDLIEKDVASALIYLPSHAADLKNPEVRAYLDRFVRGSNGTSAFDRIKLMKLLWDAIGTEFGGRHELYERNYAGNHENIRIETLGAAMAMGVTANLKAFAERCMAEYDLDGWTVDDLVNPTDVNVVMSR

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Crispr_ID: NC_011831_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_20

2770721-2771851

Orphan

Consensus_repeat	Method
ACGGCACCGGTCGGCAACGGG	CRT

26 spacers

The CRISPR arrays of NC_011831_20

>merge|NC_011831|20|2770721-2771851|CRT
ACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACTGCACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCACCGGTCGGCAACGGGCTGGCGGTGGAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGGCTGGCGGTGAAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCACCGGTCGGCAACGGGCTGGCGGTGGAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCATCGGTTGGTAACGAGCGGTCATCTGACCACTGCACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCACCGGTCGGCAACGGGCTGGCGGTGGAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGGCTGGCGGTGAAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGGCTGGCGGTGAAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCATCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCATCGGTTGGTAACGAGCGGTCATCTGACCACTGCACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCACCGGTCGGCAACGGGCTGGCGGTGGAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGGCTGGCGGTGGAGCGCTGGGCTGCGCCACGGCACCGGTCGGTAACGGGCTGGCGGTGGAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGGCGGTCATCTGACCACCGCACGGCACCGGTCGGTAACGGGCTGGCGGTGAAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGGCTGGCGGTGAAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGGCTGGCGGTGAAGCGCTGGGCTGCGCCACGGCACCGGTCGGCAACGGG

>NC_011831|20|4|2770721-2771851|CRT
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACTGC
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCACCGGTCGGCAACGGG	CTGGCGGTGGAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG	CTGGCGGTGAAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCACCGGTCGGCAACGGG	CTGGCGGTGGAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCATCGGTTGGTAACGAG	CGGTCATCTGACCACTGC
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCACCGGTCGGCAACGGG	CTGGCGGTGGAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG	CTGGCGGTGAAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG	CTGGCGGTGAAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCATCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCATCGGTTGGTAACGAG	CGGTCATCTGACCACTGC
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCACCGGTCGGCAACGGG	CTGGCGGTGGAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG	CTGGCGGTGGAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGTAACGGG	CTGGCGGTGGAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG	CGGTCATCTGACCACCGC
ACGGCACCGGTCGGTAACGGG	CTGGCGGTGAAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG	CTGGCGGTGAAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG	CTGGCGGTGAAGCGCTGGGCTGCGCC
ACGGCACCGGTCGGCAACGGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015941018.1\|2783426_2783615_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015940997.1\|2757801_2758878_-\|M42-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349906
NC_011831.1\|WP_015941000.1\|2761543_2762713_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NC_011831.1\|WP_015941002.1\|2763691_2765854_-\|glycoside-hydrolase-family-65-protein	unknown	unknown	gnl\|CDD\|224471
NC_011831.1\|WP_015941003.1\|2765903_2766830_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NC_011831.1\|WP_015941008.1\|2771904_2773338_-\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|319889
NC_011831.1\|WP_015941016.1\|2782133_2782583_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941006.1\|2769538_2770558_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380515
NC_011831.1\|WP_049762833.1\|2781709_2782204_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941010.1\|2775444_2776557_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NC_011831.1\|WP_015941017.1\|2782937_2783387_+\|division/cell-wall-cluster-transcriptional-repressor-MraZ	unknown	unknown	gnl\|CDD\|234728
NC_011831.1\|WP_015941011.1\|2776598_2778110_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NC_011831.1\|WP_015941005.1\|2768000_2769338_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270451
NC_011831.1\|WP_015941004.1\|2766844_2767735_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NC_011831.1\|WP_015941012.1\|2778106_2779951_+\|maltodextrin-glucosidase	unknown	unknown	gnl\|CDD\|236759
NC_011831.1\|WP_015941014.1\|2780689_2781667_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NC_011831.1\|WP_015941001.1\|2762865_2763522_-\|beta-phosphoglucomutase	unknown	unknown	gnl\|CDD\|213672
NC_011831.1\|WP_015940998.1\|2758894_2760163_-\|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|223690
NC_011831.1\|WP_015941009.1\|2773452_2775243_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|225277
NC_011831.1\|WP_015940999.1\|2760321_2761317_+\|lamin-tail-domain-containing-protein	unknown	unknown	gnl\|CDD\|376421

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015940997.1\|2757801_2758878_-\|M42-family-metallopeptidase	gnl\|CDD\|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	1.32783e-158
NC_011831.1\|WP_015941000.1\|2761543_2762713_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	9.04127e-07
NC_011831.1\|WP_015941002.1\|2763691_2765854_-\|glycoside-hydrolase-family-65-protein	gnl\|CDD\|224471	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism].	0
NC_011831.1\|WP_015941003.1\|2765903_2766830_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.02388e-79
NC_011831.1\|WP_015941008.1\|2771904_2773338_-\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|319889	cd16367, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	2.67122e-53
NC_011831.1\|WP_015941006.1\|2769538_2770558_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|380515	cd06292, PBP1_AglR_RafR-like, Ligand-binding domain of uncharacterized DNA transcription repressors highly similar to that of the repressors specific raffinose (RafR) and alpha-glucosides (AglR) which are members of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins highly similar to DNA transcription repressors specific for raffinose (RafR) and alpha-glucosides (AglR). Members of this group belong to the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	3.20445e-129
NC_011831.1\|WP_015941010.1\|2775444_2776557_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
NC_011831.1\|WP_015941017.1\|2782937_2783387_+\|division/cell-wall-cluster-transcriptional-repressor-MraZ	gnl\|CDD\|234728	PRK00326, PRK00326, transcriptional regulator MraZ.	1.93707e-32
NC_011831.1\|WP_015941011.1\|2776598_2778110_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NC_011831.1\|WP_015941005.1\|2768000_2769338_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.41313e-102
NC_011831.1\|WP_015941004.1\|2766844_2767735_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	9.83576e-82
NC_011831.1\|WP_015941012.1\|2778106_2779951_+\|maltodextrin-glucosidase	gnl\|CDD\|236759	PRK10785, PRK10785, maltodextrin glucosidase; Provisional.	0
NC_011831.1\|WP_015941014.1\|2780689_2781667_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	8.95093e-11
NC_011831.1\|WP_015941001.1\|2762865_2763522_-\|beta-phosphoglucomutase	gnl\|CDD\|213672	TIGR01990, bPGM, beta-phosphoglucomutase. This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	3.68928e-87
NC_011831.1\|WP_015940998.1\|2758894_2760163_-\|CCA-tRNA-nucleotidyltransferase	gnl\|CDD\|223690	COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis].	1.32816e-43
NC_011831.1\|WP_015941009.1\|2773452_2775243_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|225277	COG2414, COG2414, Aldehyde:ferredoxin oxidoreductase [Energy production and conversion].	1.03511e-120
NC_011831.1\|WP_015940999.1\|2760321_2761317_+\|lamin-tail-domain-containing-protein	gnl\|CDD\|376421	pfam00932, LTD, Lamin Tail Domain. The lamin-tail domain (LTD), which has an immunoglobulin (Ig) fold, is found in Nuclear Lamins, Chlo1887 from Chloroflexus, and several bacterial proteins where it occurs with membrane associated hydrolases of the metallo-beta-lactamase,synaptojanin, and calcineurin-like phosphoesterase superfamilies.	8.13053e-11

>NC_011831.1|WP_015941006.1|2769538_2770558_-|LacI-family-transcriptional-regulator
MTATKVTLKDVAARAGVSYQTVSKVLNGEMQVAPETMERIQAAVQELGYRPNRIARNMRAGRSFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINYNDPRVQFLLKQKFPFVAFGRSNPDWDFAWVDIDGTAGTRQAVEYLIGRGHRRIAILAWPEDSRVGNDRLQGYLEAMQTAQLPIETGYILRGEGTFEVGRAMTLHLLDLSPERRPTAIMTLNDTMAIGAMAAARERGLTIGTDLAIIGFDDAPMVQYLFPPLSSVRQPIAEAGRKCIELLVAIVEGREPEQKHILLQPSLIIRASS
>NC_011831.1|WP_015941005.1|2768000_2769338_-|ABC-transporter-substrate-binding-protein
MNRPIKFLMLLAVLALVLSACGQTTTQQPASTPQTIRETVTVKETVTVKETVVVPAEKVTVRLSGWASSPAETALLESLLYKFSVENPDILVKYEPITGDYKQVLLTSIASGTEPDIFYVDIFWWLELAANDALLPLDDLMASSGVSRDDFIPALIDAFTYNGKTYGIPKDFNTLGMFYNKALFDKAGLAYPTDDWTWDDLRNAAAALTDLSDPNKPIYGFCTPPDPGRFPVFIFQNGGMVMNPDYTDTMLDSDPAVKAAEFYTSFRTNQIGALPSDLGEGWQGTLFGKGQCAMVYEGGWLIPYLRDQFPNTQYGVVMPPAGPGGEGNLIFTVAWGISANTKNPEAAWKVVNFLTSEASQKTVLESGFALPSRQSLQNSDYLKNNPNSAAIFNGSFFGAKPFFWGAVGSDVNDQMSKALERMFKENQPAPEAMKQAAEAIRKAMK
>NC_011831.1|WP_015941004.1|2766844_2767735_-|sugar-ABC-transporter-permease
MRTTNWRRKWADALNGYLFISPWLIIFIIFSLISLGYAVYLSFTEYNLLRPPRWWGFEGYQRVFADDLFLSKALPNTFKYALIVVPIQTFLSLVLAFAMDQNLRFQRFFRTIFYLPSVTSSVVISLIFIWIFAPQGIFNQITGLTVNWLDDPRTAFYVIMGMNIFTTSGTLMLIFLAGLQDIPLAVYEAAEIDGANGLQKFFYITIPMLRPVIFFVVTVGVIGCFQVFDQIFVMTSGGPLDSTTTITYLIYKWAFRDTRIQMGQASALAVILTLIILAVTLLQRRVIEGSGSGVER
>NC_011831.1|WP_015941003.1|2765903_2766830_-|carbohydrate-ABC-transporter-permease
MAVTTSSPQAQVYARTVFFDRLRKYLFFAMLAFWAVLSVAPLYFTLVFSFKPVADIYTPPIWAPLPFTLENYITILGTFELFPRWVWNSVFISVIITVFRVLFCAMAGYAFARIEFPLKNFWFNLLLISMMMPGVVTLIPSFLIIGPGLIRGGLQLGDLTIPTGFGLIDTPWGVILPGVADAFGVFMMTQFYKSFPKELEEAAMMDGSGRWGTFFRIVLPISQTQLITLALLTFQGAWNNFMWPLLVLRSPEQFTLPIGLQWFRGEYYTLYSVILAGSIFNTLPILIIFFVFQQYFVRSIAATGSKEG
>NC_011831.1|WP_015941002.1|2763691_2765854_-|glycoside-hydrolase-family-65-protein
MWILAEDAFDPAQQHHKETIFTIGNGYLATRGAFEEGYPNDRRATFIHGVFDDAPIVVTELANAPDWLAMQVLLDGEKFSLATGTILAYRRELDMQNGILRREVRWRSPQGRVVTIRFTRFASLADEHLLALRCEIVPEFDGQIEVRAALNGQTDNEGLLHWRLIEQGQLTDGTVFLRTRTRKSGIEVACAMRLHGDTAQTMFWDVENVPTLQQVYPAYAGQPIVVMKFVGIATSRDGNQPLDIAHHHVQTAHNWESALAAQQQAWAREWERCHVEINGDDEADLAVRFSIFQLLIAAPRHDHRVNIGAKTLSGFGYRGHAFWDTEIFMLPLFIYTSPEIARNLLDYRYVTLPAARAKARAAGYEGAWYAWESADTGEEVTPTWVPDFHDKKKLARVWTGDLAIHISADVAYAVQQYWQATGDNAWYIERGAEIVLDTAKFFAARAEWLAERGCYGYTDVIGPDEYHDHVNNNAYTNLLAQWNIRTGLETLAWLEQHAPQKAAELRQQLDLTPERLQHWQTVAEKMCISLRPNGLIEQFDGFFALKDVNLADYEPRTKSMHEIFGIEGANEYQAIKQPDVLMLQFLLREQYSDSQIRVNYDYYTPRTDHTYGSSLGPPIQAIVACQMGDVAEAYEHFIRAARADLRDVRGNAGDGIHAASAGGVWQAVVFGFGGLRIHPDGTWEVHPRLPSYWRWLTYRFTLRGQTHTVTCYPDGSYTIG
>NC_011831.1|WP_015941001.1|2762865_2763522_-|beta-phosphoglucomutase
MSIKGFIFDLDGVVTDTAEYHYQAWKRLADELGIPFTREENEALRGIPRRESLLMLLKGRTYPETTLDELMERKNRYYLEYIRAISPRDLLPGARELLQEIRAAGLKAALGSASKNAREVIERLGIADLFDAIADGYSVTRQKPAPDLFLHAAALLGLPPTECAVVEDATAGVEAALAGGFTVIGIGPHERVGRAHLVLPSLAGVSLSKLLEQLSVSA
>NC_011831.1|WP_015941000.1|2761543_2762713_-|CPBP-family-intramembrane-metalloprotease
MSEPLVFTTERPPTRRPGLWIGGLALYILLIGISANLGGELALFLNASFNVLPFAGLAILAYFAGTQFNWAWIATGIWATLLIGIVSVYTFILGVASLIDIPPGGLNPDQPPSLSPSVVLSILLLIIGIGSAIALGFLTLLPPIRHRLARFIPIDPSSFVHTVALTTIVIITLVMFVPLLIIGQPPLLAFITMVGSDAFSNLSNDEQLRSQIYGLVWTIPASLLAVGFGIRRNLTETLVRLGFVRPTLRQGLLGVGIGLGLAGLMTLVLPLMDTLWQTLGWPTTDDEAFGELMSFAVSPIGALVIGVTAGLGEELGVRGVLQPRLGIWLSNLFFVSLHAFQYHWDALLVVFVIGMTCGFVRKRTNTTTAAIVHGVYNFVMVMLTVIFGS
>NC_011831.1|WP_015940999.1|2760321_2761317_+|lamin-tail-domain-containing-protein
MPNQHYRALLLVFAVVAVALLAIAQQTYAQPPPIACPTNQTVVLSGTNAPPQRSLVVFFAGQPVGGGFSDAAGYWRIPLRVNEPSGIYPVTVQVRGTEQVVAGVLCYVDVPLPMSATGGPTEPLLTATATDRPSAHLTTTPTPLRSTQTFTAIPRTPTGLPVTNTPTTAVTMAPVTPTTVATVATVTPTIRVTSVTATVTSTAIGDTGAPTRTPTLVPANLAVTLEIVPYDPATSTSLNDEYVQIRSEETIDLSIAGWRIVNISRSDRPTFIFPAFILAPEVDAYLYTGSGTNNFATGDFYWGRNAAVWRTGDIAHLLDAQGRVVSAYQVP
>NC_011831.1|WP_015940998.1|2758894_2760163_-|CCA-tRNA-nucleotidyltransferase
MDHLTNRLEPPLQHILACAAALAATVDATLWLVGGVVRDLLLELPIGRDIDLAVEGDVTRLAPLLATTLGGTITARHPAFGTATLAVDHWIIDLAQTRTEYYPQPAVLPVVQPAPLTTDLARRDFSINAMAIRLVADDGRLLPMPLFDPLNGAVDLAARRLRLLHDRSLRDDPTRILRGVRLAARLNLTPEPATAAQIETALTNGYLALLTPERIQTELCLTLSEPDPAAVVALADRWQVTSHIIPGLHWSSALAERLARYRHDEAGIAGLAPAEPVIAGLLLYDLSEDDLQAVRQRYHLPTPFRRLLIELSRLRSLAQSITTTLSPSQLDALLHSYSTATIAVLHYAATTSTASLIARYLREWRPLRPPLTGDDLQAMGVAPGPQLGRLLRDLRAATLDGTVTDRVTAERWVYQQLAAARS
>NC_011831.1|WP_015940997.1|2757801_2758878_-|M42-family-metallopeptidase
MDAMLQLFGDLIAAPGPSGYEGAVREVMRRYLEPIGEIEIDYLGSIIAHRTGKPDGPRVALAAHLDEIGLLVTRITDDGFLKFQPLGGWWDHVLLGMRVEVIGRNGPIIGVIGAKPPHILSNDERSRLVEKKTMYIDIGATSRDEVVAWGVRPGDPVVPVGPLTPMRNPDLLMAKAIDNRVGCAIVVETLRRLVGVTHPNIIFGVGNVQEEVGLRGAATTTYTIQPDIGITIDTAIAGDTPGVGPDDAMSRLGQGPALLLIDGSLIAHATLRHLVIDVAAEEGIPLQFDLMPGGGTDGGRMHIFGKGVPTVVIGPPVRYIHSASAIVHRRDIEQTVQLLLALIQRLNSETVRQIRQGM
>NC_011831.1|WP_015941008.1|2771904_2773338_-|cyclic-nucleotide-binding-domain-containing-protein
MSSLKHPMRHRHDQGRSAHREQRQQQAIAALAALDCLRGVSTTELTTLYERGVFRVFPSGATVIGQRRGYRYLFFLLRGSLQLRLRDKDGHEVLMGVLGQGDCFGEGPLFGKFFRHMSALTQDTCYLLQIDISTLREELAALPLLTTALRKVYRRRMVEATLARIPILSQLLPIERIAIATRLQPRHVPRGTVIVKQGEPADSLYLIENGQVVIEQSGQTIATLGEGDLFGEISLLTGEPHRATTRALTTTDLLELPGAEFYRLINQYPALETELRAIAERRLKHSAAVRSNAARARDIELAVHRGILRATHILVRDPARCPPGCRLCETGCASRHGHSRLHLNGTPIERFDVLDSCRQCSVGAECVEACPEDAIERVDTGALRITNRCTGCGECVTACPYDAVQTVPRAKYQTGPLWDLFRRWQQRIRPTIPLATSVPTHRADKCDLCFGYTDLACISACPIGNLRLAPVEEIVQV
>NC_011831.1|WP_015941009.1|2773452_2775243_+|aldehyde-ferredoxin-oxidoreductase
MPLRSLTVDLARGHARQLLPAEVERDYLGGRGAIAWLLWYQLEPDTPPLSANNLLIFATGPLAGSSGYATGGFTVGTRSPLTGGIAYGWAPGHWGAALRRNNVDVLIIRGEAPDWCYLLIDGDTVRLRSARHLVGRDTVATAATLSAELGGDVRVLAIGPAGEVGVAYASIVAEGQYLVEPAGTGAVMADKKLKAIVVRDRAPLPVADVARMQSVLQSIQQRGERHPTANAIRAIGSAGLLPAAIKLGALTSRDARTPADGVAIARMFSEIARRGGRQERGCAGCPLPCYIDLRTRTGETHPLPSLELIAGFGARVGITDADTMLAIADRCLRLGIDPAAAAAAITFMTEAQDEGLVRQRTLNWGDGAAVIAALDRMSQRQEKRDILSLGVGEMQEAVWGSAAFAPQVKGLAMPALDPRALTEIGLAMATSPIGGDYRYAMAFEELVAEPPAWLPPPASGPRETEGKALRLIWHERFAAVLDASGLCRRLGLMAYQVTPGELIALLSAVSGRTISGADLVRIGERIVTLDRMFTRRYAANSQDTLPDRYLREPLSSGPTAGYTPPLDVLLAEYYARHGWDSAGDPTPARLAELGIP
>NC_011831.1|WP_015941010.1|2775444_2776557_+|glutamate-5-kinase
MTRFVVKLGTSVLTAGTDRLHRPYFVELARQIVRLKADGHEVVLVSSGAIAAGKERLGADPRRRSNIPLKQVFAAVGQSRLMHIYEQIFDLYGLQVAQALLTRDDLRDRRRYLNARNTLTLCLAQGIVPIINENDAVATAEIRVGDNDNLSALVAGLIDADLLLILTDIAGLYSADPRTDPTAELLREVPVIDERIWAMAGGSGTHRGTGGMQTKIQAADLATRSGVAVVIAAGHEPDVIVRVANGERIGTYFPATTSHPDARQRWILAETVRHSRIVIDEGAAMALIQYGKSLLAAGIREVNGEFDRGQTVRIFDLAGREIARGLTQYRSSDLRLIAGLRSHQIGPVLGYDYGPEIVHRDDMVVLATKE
>NC_011831.1|WP_015941011.1|2776598_2778110_+|glutamate--tRNA-ligase
MAGIEGPVRVRFAPSPTGSLHIGGVRTALFNWLCARHYGGQFILRIEDTDEKRFVPGAADDISISLRWVGIDWDEGPDVGGPYGPYVQSQRFEQGIYRPYVDQLLEAGLAYMSFTTEEELTQMRAAAEAAGIKAFRFRGSERDWPLERQRELAASGKPYTVRLKTPLDGETRFSDLIRGGDEIVVQNDQLQDIVLIKSSGMPVYHFAHLVDDHLMKITLVMRGEEWVPSTPYHVLLYDYFGWQRPIFAHLPAILRHDGKGKLSKRKDDVATQRFRERGYLPETMLNYLALQGWSYDGVTEIMNREELIARFSIERIQPSPARWNPEKLRDMNGIYIRKLSREQLAERVLPFMQRAGLIGDPASDTERAYLLQLIPLIHERLEELQEAPELLEFFYCEVTPGVTYQPTDLIPKKHDAVQTVTMLRAAHDVLQRQTDWTAPALETALRTLVEQLGVKPGPLFSAIRIAVTGRSVAPPLFDTLAGVGRERSLERLAAAIAALEQMS
>NC_011831.1|WP_015941012.1|2778106_2779951_+|maltodextrin-glucosidase
MTIRSWEASIHHDGSPRYVQFGGRVGDTARLRLRIAADAPVGGVFVRTCPDGEQHFTPMRDLGVQGVCRWWEGELPIRMLRTNYRFLLRADDGVYWYSAGGVTRYYPTDANDFVLLANYHAPTWVRDAVFYQIFPDRFADGDPGNNVRDGEYLYQGRPVVARRWHELPQRATGSIEFYGGDLQGIAQRLDYLTDLGVSALYLNPIFRAPSNHKYDVEDYTHIDPHLGGEAGLLTLRQALDERTMRLVLDIVPNHCGVTHPWFVAAQADRHAPTAEFFTFRRHPDEYECWLGVKTLPKLNYRSVRLREVMYAGPDAIMRRWLRPPYRIDGWRIDVANMLGRLGPDNLGHKIGRGIRRAVKAEQPNAYLLGEHFFDGTPHLQGEELDATMNYQGFTFPVWRWLAGFEFNPQRPEADPRPIATETMAAQWTVFRAAIPWQIATQQFNLLGSHDTPRLRTIVGDDLARVRVAMTLLFTYPGVPCIYYGDEIGLAGGGDPDCRRTMPWDEAEWDHDLRAFVRRLAHLRRSAPALRWGGFQQLYAQGETIAFQREAPEERLIVVARRSDDGLRALPVRHAGLADGVTLRELFTSAETVARNGMLDISSLPATGAQVWRAL
>NC_011831.1|WP_015941014.1|2780689_2781667_+|CPBP-family-intramembrane-metalloprotease
MIPAWFTHNRLYDLARSGRRLTPWWGVIIIGILIALLSQVLSLPVIIAEVLLTGGVLEADKVGVSPVVSGVWLSLLLTVSFGALILLTWLWIRFYEGRGITSVGLVDPQRGLFLYGRGMLIGLTIFSTIVGILAPFGFIAVEVGDPAHVGMAALGGVLLMLIPGWLIQGAAEEVLTRGWMLPTLAVRYRPWVGVLISSLFFAVMHGLNPNLSFLALLNLFLYGMFAALYALREESLWGICAFHSIWNWAQGNLFGLAVSGQTVSGGMLFNLMETGPDWLTGGTFGPEGGLATTIVLVISMAIIWWWPTVDTRPKVPEPISVKRQG
>NC_011831.1|WP_049762833.1|2781709_2782204_-|hypothetical-protein
MPTIPRRWPTELETERVELIRVADEAVQYIQQARSTLEQASPELSRNIHLARVMLVTAERAVYDALTCIERMRRYLAIVRGADINGRWPMVAARQRDDSEHALERAAQSLEEVQDLFERLRPTYSSNLTLAEAILADMTLALARARRSIEQMVRLLTEAAIGRD
>NC_011831.1|WP_015941016.1|2782133_2782583_-|hypothetical-protein
MQAVNYTTTIDTVTDADHLAVQLPLQVIGLSTMYAAALQFIQRRYPTLAPDHLWAEVAGGVVLSLAPVAVAARRVRGLDWRHYEELVWRSFVAAGIPIILWQLGESVLRRREAEEYLRRTRRSVVEYADDPTPLANRTGDREGGTDPRG
>NC_011831.1|WP_015941017.1|2782937_2783387_+|division/cell-wall-cluster-transcriptional-repressor-MraZ
MLLGTWIVPIDDNGRCVIPSPLRPLLGLTVVVTRGFERCLHICPEPFWRGLARRVSTLTLGGGDERWLRRLLFAEAQVSLLDAQAAITFSTALRTYAGLERTAVFVGMDQYLEVWAPERWQECEMTLLASAGRWSRLDWGVAHSDVVSL
>NC_011831.1|WP_015941018.1|2783426_2783615_+|hypothetical-protein
MNSSRLYSSRLLSDRPAGSALVARQRLRQTLERERLLVREPNADQRLLVALLAADVPTRSEG

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Crispr_ID: NC_011831_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_21

2819335-2819431

Orphan

Consensus_repeat	Method
GCGCTCCACCAGGCCATCACCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_21

>merge|NC_011831|21|2819335-2819431|CRISPRCasFinder
GCGCTCCACCAGGCCATCACCACTGATAACCCAACGGCCATTGGTGTTTACCGTATTGCTCCGCCGACCAGGCTGCGCTCCACCAGGCCCTCACCAC

>NC_011831|21|17|2819335-2819431|CRISPRCasFinder
GCGCTCCACCAGGCCATCACCAC	TGATAACCCAACGGCCATTGGTGTTTACCGTATTGCTCCGCCGACCAGGCT
GCGCTCCACCAGGCCCTCACCAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_157044919.1\|2819945_2820683_+\|DUF3782-domain-containing-protein	unknown	unknown	gnl\|CDD\|369519
NC_011831.1\|WP_015941058.1\|2822101_2822770_-\|LON-peptidase-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366967
NC_011831.1\|WP_015941063.1\|2827947_2828211_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941053.1\|2818060_2818645_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_011831.1\|WP_015941059.1\|2822776_2823973_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl\|CDD\|239065
NC_011831.1\|WP_015941060.1\|2824006_2825209_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|185082
NC_011831.1\|WP_015941051.1\|2816782_2817325_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_011831.1\|WP_015941043.1\|2810087_2811605_-\|YifB-family-Mg-chelatase-like-AAA-ATPase	unknown	unknown	gnl\|CDD\|223679
NC_011831.1\|WP_015941049.1\|2815536_2816079_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_011831.1\|WP_015941057.1\|2821806_2822091_-\|DUF503-domain-containing-protein	unknown	unknown	gnl\|CDD\|377364
NC_011831.1\|WP_157044865.1\|2825243_2825483_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941054.1\|2818741_2819284_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_011831.1\|WP_015941062.1\|2826524_2827526_+\|threonine/serine-dehydratase	unknown	unknown	gnl\|CDD\|107205
NC_011831.1\|WP_015941047.1\|2813876_2814461_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_011831.1\|WP_015941061.1\|2825531_2826512_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381305
NC_011831.1\|WP_015941048.1\|2814590_2815133_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_011831.1\|WP_015941044.1\|2811823_2812528_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941046.1\|2813162_2813747_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_011831.1\|WP_015941052.1\|2817421_2817964_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_011831.1\|WP_015941056.1\|2820710_2821763_-\|AAA-domain-containing-protein	unknown	unknown	gnl\|CDD\|274135

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_157044919.1\|2819945_2820683_+\|DUF3782-domain-containing-protein	gnl\|CDD\|369519	pfam07788, PDDEXK_10, PD-(D/E)XK nuclease superfamily. This family is found to carry modified motifs characteristic of PD-(D/E)XK endonuclease superfamily. These are the conserved Glu of motif I, the Asp surreounded by hydrophobics of motif II, EIKS of motif III, and the lysine of mmotif IV has migrated to an alpha-helix following the third core beta-strand. The conserved patch of positively charged lysine and arginine residues in the motif IV apha-helix might be involved in substrate-binding or be contributing to active site formation. Members with an additional N-terminal coi9led-coil domain, are annotated as tropomyosin, coiled-coil or microtubule binding proteins.	5.01168e-23
NC_011831.1\|WP_015941058.1\|2822101_2822770_-\|LON-peptidase-substrate-binding-domain-containing-protein	gnl\|CDD\|366967	pfam02190, LON_substr_bdg, ATP-dependent protease La (LON) substrate-binding domain. This domain has been shown to be part of the PUA superfamily. This domain represents a general protein and polypeptide interaction domain for the ATP-dependent serine peptidase, LON, Peptidase_S16, pfam05362. ATP-dependent Lon proteases are conserved in all living organisms and catalyze rapid turnover of short-lived regulatory proteins and many damaged or denatured proteins.	4.4594e-34
NC_011831.1\|WP_015941043.1\|2810087_2811605_-\|YifB-family-Mg-chelatase-like-AAA-ATPase	gnl\|CDD\|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	0
NC_011831.1\|WP_015941053.1\|2818060_2818645_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.46969e-26
NC_011831.1\|WP_015941059.1\|2822776_2823973_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl\|CDD\|239065	cd02152, OAT, Ornithine acetyltransferase (OAT) family; also referred to as ArgJ. OAT catalyzes the first and fifth steps in arginine biosynthesis, coupling acetylation of glutamate with deacetylation of N-acetylornithine, which allows recycling of the acetyl group in the arginine biosynthetic pathway. Members of this family may experience feedback inhibition by L-arginine. The active enzyme is a heterotetramer of two alpha and two beta chains, where the alpha and beta chains are the result of autocatalytic cleavage. OATs found in the clavulanic acid biosynthesis gene cluster catalyze the fifth step only, and may utilize acetyl acceptors other than glutamate.	1.44826e-151
NC_011831.1\|WP_015941060.1\|2824006_2825209_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|185082	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI.	2.80326e-130
NC_011831.1\|WP_015941051.1\|2816782_2817325_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.81989e-23
NC_011831.1\|WP_015941056.1\|2820710_2821763_-\|AAA-domain-containing-protein	gnl\|CDD\|274135	TIGR02442, Uncharacterized_protein_Rv2850c/MT2916, cobaltochelatase subunit. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (pfam06180). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis (TIGR02257/TIGR01650/TIGR01651). A number of genomes (actinobacteria, cyanobacteria, betaproteobacteria and pseudomonads) which apparently biosynthesize B12, encode a cobN gene but are demonstrably lacking cobS and cobT. These genomes do, however contain a homolog (modelled here) of the magnesium chelatase subunits BchI/BchD family. Aside from the cyanobacteria (which have a separate magnesium chelatase trimer), these species do not make chlorins, so do not have any use for a magnesium chelatase. Furthermore, in nearly all cases the members of this family are proximal to either CobN itself or other genes involved in cobalt transport or B12 biosynthesis.	4.32217e-84
NC_011831.1\|WP_015941049.1\|2815536_2816079_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	2.88796e-25
NC_011831.1\|WP_015941057.1\|2821806_2822091_-\|DUF503-domain-containing-protein	gnl\|CDD\|377364	pfam04456, DUF503, Protein of unknown function (DUF503). Family of hypothetical bacterial proteins.	1.58871e-34
NC_011831.1\|WP_015941061.1\|2825531_2826512_+\|aldo/keto-reductase	gnl\|CDD\|381305	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins. Escherichia coli YajO is the prototype of this family. It is an uncharacterized aldo/keto reductase family oxidoreductase.	0
NC_011831.1\|WP_015941054.1\|2818741_2819284_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	8.51312e-26
NC_011831.1\|WP_015941062.1\|2826524_2827526_+\|threonine/serine-dehydratase	gnl\|CDD\|107205	cd01562, Thr-dehyd, Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.	2.94844e-117
NC_011831.1\|WP_015941047.1\|2813876_2814461_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	3.04559e-26
NC_011831.1\|WP_015941048.1\|2814590_2815133_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	7.74258e-24
NC_011831.1\|WP_015941046.1\|2813162_2813747_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	5.35031e-26
NC_011831.1\|WP_015941052.1\|2817421_2817964_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	8.76112e-24

>NC_011831.1|WP_015941054.1|2818741_2819284_+|sigma-70-family-RNA-polymerase-sigma-factor
MHSPTHSTIVTGLHRRDPQIIGWLYTTYAPRLIGYFSRRLRDPDLARDLHHELFLRLLERAPTFADRGVPIEAWLFRLAHDLVVDTHRRAGRTVPLTEAAYPAADDDVTITCLHAADQAALHQALTTLPLTYRRVLTLRFCDNCSLADTALQLGLSLSATKALQRRAIARLRALLSPPMA
>NC_011831.1|WP_015941053.1|2818060_2818645_+|sigma-70-family-RNA-polymerase-sigma-factor
MHSPTHSTIVTGLHQRDPQIIGWLYTTYAPRLIGYFSRRLRDPDLARDLHHELFLRLLERAPTFADRGVPIEAWLFRLAHDLVVDTHRRAGRTVPLTEAAHPAADDDVTITCLHAADQAALYQAITTLPLTYRRVLTLRFCDNCSLADTALQLGLSLSATKALQRRAIARLRALLVTAPDDVPPSLPPYSPPMA
>NC_011831.1|WP_015941052.1|2817421_2817964_+|sigma-70-family-RNA-polymerase-sigma-factor
MQPPTHHTIVTGLHQRDPQIIGWLYTTYAPRLIGYFTRRLRDPDLARDLYHELFLRLLERAPTFTDRGVPIEAWLFRLVHDLVVDTHRRAGRSVPLTDAAHSAADDAVTLTCLHAADRAALHQAITTLPFAYQHVLTLRFRDHCSLADTALQLGRSLSATKALQRRAIARLRAILSPPMA
>NC_011831.1|WP_015941051.1|2816782_2817325_+|sigma-70-family-RNA-polymerase-sigma-factor
MHSPTHSTIVTGLHQRDPQIIGWLYTTYAPRLIGYFSRRLRDPDLARDLYHELFLRLLERAPTFTDRGVPIEAWLFRLVHDLVVDTHRRAGRSVPLTEAAHPAADDDVIITCLHAADQVALHQAITTLPLTYRRVLTLRFRDHCSLADTALQLGRSLSATKALQRRAIARLRAILSPPMA
>NC_011831.1|WP_015941049.1|2815536_2816079_+|sigma-70-family-RNA-polymerase-sigma-factor
MHSPTHSTIVTGLRQRDPQIIGWLYTTYAPRLIGYFSRRLRDPDLARDLHHELFLRLLERAPTFTDRGVPIEAWLFRLAHDLVVDTHRRAGRTVPLTEAAHPAADDDVTITCLHAADQAALHQALTTLPLTYRRVLTLRFCDNCSLADTALQLGLSLSATKALQRRAIACLRALLSPPMA
>NC_011831.1|WP_015941048.1|2814590_2815133_+|sigma-70-family-RNA-polymerase-sigma-factor
MHSPTHSTIVTGLRQRDPQIIGWLYTTYAPRLIGYFSRRLRDPDLARDLHHELFLRLLERAPTFTDRGVPIEAWLFRLAHDLVVDTHRRAGRSVPLTDAAHSAADDAVTLTCLHAADQAALYQAITTLPLTYRRVLTLRFRDNCSLADTALQLGLSLSATKALQRRAIACLRALLSPPMA
>NC_011831.1|WP_015941047.1|2813876_2814461_+|sigma-70-family-RNA-polymerase-sigma-factor
MQPPTHHTIVTGLHQRDPQIIGWLYTTYAPRLIGYFTRRLRDPDLARDLYHELFLRLLERAPTFTDRGVPIEAWLFRLAHDLVVDTHRRAGRSVPLTDAAHSAADDAVTLTCLHAADQAALHQALTTLPLTYRRVLTLRFRDNCSLADTALQLGLSLSATKALQRRAIACLRALLVTAPDDVPPSLPPYSPPMA
>NC_011831.1|WP_015941046.1|2813162_2813747_+|sigma-70-family-RNA-polymerase-sigma-factor
MQPPTHHTIVTGLHQRDPQIIGWLYTTYAPRLIGYFTRRLRDPDLARDLYHELFLRLLERAPTFTDRGVPIEAWLFRLAHDLVVDTHRRAGRSVPLTDAAHSAADDAVTLTCLHAADQAALYQAITTLPLTYRRVLTLRFRDNCSLADTALQLGLSLSATKALQRRAIACLRALLVTAPDDVPPSLPPYSPPMA
>NC_011831.1|WP_015941044.1|2811823_2812528_+|hypothetical-protein
MEMEYSLALALEDYLPVIFSLIGVWFLARTVYQLDRGLGMMVFTGLGLLAVGGLLKATWKLLMALNGTDVPLFSQALFPMIAPGFTLIATAVYSYTRQLRGQSAFRWPWLAPLIIIALFGGGSAIIAANGGPWRVPLIMLATIGNVALLLMLAIGAWRRNMRGLAVGFVVVLLVIIGMSQMASNIPQTIAVQWFEQIAQTLAQLAFCLGTWQLTQRMAQEAPVRRLAVSVGQAG
>NC_011831.1|WP_015941043.1|2810087_2811605_-|YifB-family-Mg-chelatase-like-AAA-ATPase
MLAKVLSCAVIGLDGVLVDVEVDVAGGMPAFSVVGLGDAAVHESRERVRSAVRNSGMRFPMQRITVNLAPADLRKAGPAYDLPIALGLLIATGQLDANLADAVFVGELSLDGSLRHTDGILPMAAVARAHGITTMYLPAEDAAEAALIDGLHIIPLTSLRALIDHLNGDHPIRPYQGQMGFTPIVPTPHVDFADVRGQEHVKRALEIAAAGGHNVLMSGPPGAGKTMLARALHAILPPLSFAEALEVTKIYSVAGQLPRDTPLIRERPFCAPHHTVSTAGLVGGGTRVKPGMITLAHRGILFLDELPEFGHRLEVLRQPLEDRIVTLSRAQGSITYPAAFMLVAAQNPCPCGWHGDPERTCTCSPTLVNRYQRRVSGPLLDRIDLHIEAPRIKYDKLSSLAAGETSAAVRERVIFARNRQTERLRQHPHCRSNADLGPAEIRAFCALDNAGQSLLKSAVQRLNLSARSYHRILRLARTIADLAGANQIAAVHVAEAIQYRPRQGE
>NC_011831.1|WP_157044919.1|2819945_2820683_+|DUF3782-domain-containing-protein
MRLWEGQDRRWEEQDRWWEEQSRRWAEQMRLWEEQDRRWEEQSRRWAEQMRLWEEQDRRWEEQSRRWAEQMRLWEEQSRRWEEQNRRWEENQSVIRELIKRVDVLDRRFDSTIGALGARWGLSSEQSFRSALRGILTDFFPLEVIHINEYDDSGEVFGRPEHIELDLIIKNGVLLICEIKSSMSKADMYLFERKARWYQQRYGRTAQQLIVISPMVDPAAHKVAERLGIVVYSFPEDVGKAITES
>NC_011831.1|WP_015941056.1|2820710_2821763_-|AAA-domain-containing-protein
MTDEIYPFPLLAMVGQTELKTALILGLINPQIGGILISGPYGVGKTTAVRSLLDLMPFVTRDATTSNGKPLIERMRLIELPLNARLEDVVGGINERIALEQRIVRLEEGILARAHGNVLYVDEINLLDQAVVDAILDAAAQGRTFVRRGAMIRLFPSQFILIGSMNPEEGALRPQILDRFGLRVWVAPVADHRARLEIYRRARDFRNDPAGFRQVYAAQTTALAEEIMIAREILPHVTIPPELEEQALALVQRLQIPSHRAEIALLEGARARAAADFRNTVNAEDIRRIAPLALTWRHSDWFERHTANVHTEQATINAALDELFPVSETPRRRGRRSTMRQIEDSAMDNH
>NC_011831.1|WP_015941057.1|2821806_2822091_-|DUF503-domain-containing-protein
MIIGSCTIHLHIATAQSLKEKRQVLRSLISRIRNEFNVSVAEVDDQDRWQSAILGVAVVATDQVHAQRQLEAVVSFIERQRPDCPLLNYAIEML
>NC_011831.1|WP_015941058.1|2822101_2822770_-|LON-peptidase-substrate-binding-domain-containing-protein
MEQTLPLFPLGTLLFPGSLLSLHIFEERYRLMIGRCLATQQPFGIVLLRRGHEVIEGRRMAIAPEPYDVGTVAVIQEHLRLEDGRYLLQVIGQQRFRIVQIVEQTPYLVAQVKLLSDHVDGQTLAAANELRTTYQRYWERVATITGAEIDVEPLPLEPVKLSYLLADRLQIDPVQKQRWLEANVTERLRSLNKALRTELAILPRGPQRFDPRNMFGSWNSLN
>NC_011831.1|WP_015941059.1|2822776_2823973_-|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MNFTIFEDGHIASPTGFRATGISAGLKEGSKARDLALIYSQYPCRAAALFTTSVFKAAPVFLSQAILLRNHDAIRAVLINAGQANAGTGQAGLNDAIECAKITADELEIPRDSVLLMSTGLIGVPLPMQRMRNGIRRAVSELDSNGGRRAALAILTTDTRPKERVLRVSLRNGPRFTLAGMAKGTRMIHPRLATVLVLITTDLAISQPLLQRALHHSVERSFNRLNIDGDRSPNDSVIMLANGAIDHPPITDSSTWEYGVFQEALDYLCADLAGQIVRDAAGSGKVIKVVVQGAPDGAMAQTIANAVARSGSVRAACRRNSSDWGALLAAIGASAVELRPDLLDLQIGTVPVMTRGTPVPFDPTTLVQAMSGPEVELIIDLNLGPAETTVWTCTWTDG
>NC_011831.1|WP_015941060.1|2824006_2825209_-|methyltransferase-domain-containing-protein
MVTVTVHSGRERPIIQRHPWVFSGAIAAVRGNPAPGEVVEVYSQDGSWLARGFWSSSSQLRVRLATWDATQPLDETWLRDTIARAVSGRERWLIDPAIACRLVFSESDGLPGLIVDRYGCYLVIQLLTQAMAVRAEQVVAALIDLLAPRGIYERSDADVREKEDLPIVAGLRWGEQPPRMPVRPISALGQMATGLRMFADVTTGQKTGIYLDQAINHARVGAYCNGAEVLDCFSYAGGFALAAARAGACRLTLVDASADALALAGENLRLNKLTTSAEFVVGDAFHILRQYRNEQRQFDVVILDPPKFAYQQTHLQRATRGYKDINLQALHLIRPGGILATFSCSGLVSADLFQKVVFGAAVDAGRDVQILERLTQAPDHPVLLSFPEAEYLKGFICRVW
>NC_011831.1|WP_157044865.1|2825243_2825483_-|hypothetical-protein
MTNPVLRYVTCRIGAALPDGRRTAGWAPHCRMGAALPDGRRTAGWAPHCRMGAALPDGRRTAGWAPHCRMGAALPCGAT
>NC_011831.1|WP_015941061.1|2825531_2826512_+|aldo/keto-reductase
MQYTRFGTTGMHVSRICLGCMSYGSPTWREWVLDEAASRPFIFRALELGINFFDTADMYSLGMSEEILGRAIRDSGVRRDELVIATKVYQPMSDRPNDRGLSRKHIMQAIDASLRRLGMDYVDLYQIHRWDYETPIEETLEALNDVVRAGKALYIGASSMFAWQLAKALCIQERRGWARFVSMQNHLNLVYREEEREMLPLCRDAGLAVIPWSPLARGFLAGNRPQGTGAATVRGRSDTISHAMYDASDYVIVERVSEIARERGVSNAQIALAWLFHKPEVTAPIIGATKMYQLEEAVAALEIQLTPEEIQRLEEPYRPKPIRGHA
>NC_011831.1|WP_015941062.1|2826524_2827526_+|threonine/serine-dehydratase
MTARIDVNPAAILTARQHIAGIVQPTPLELSRPLSVLLGAEAWLKLELAQVTGSFKLRGAANVLRRLPPNVHVVACSAGNHALGVAHASALTGHAATLVVPATASPAKIAALRRYPVDLRLHGQSYDEAEAEALRLAKVHGWYFISPYNDPMVIAGQGTLAVEVWEALPNVEVLVVAVGGGGLASGVGLWAKAINPQVRIIGVQAAASAAMAAALRAGRVVPVPDGPTLADGLAGGLEADTITLPILQQVLDEVVCVDEAAIMQAMHWLFVEHHLIVEGSGAVPLAALLSGQIGDLRGRRVVVLLCGRNVAAETWQRVIATVSGEAERPRAAT
>NC_011831.1|WP_015941063.1|2827947_2828211_+|hypothetical-protein
MTDHQAITTAAHQTRPIVAEGTIMIILERDGSLTYHPPKIGQPRTAQTTLKEATAAELPSSSLIERIISVAFDLLGVHRLEVRIDES

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Crispr_ID: NC_011831_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_22

3037744-3037856

Orphan

Consensus_repeat	Method
GACCCTCACTCTTGTGTCCAATATCAGTATAGCAAACGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_22

>merge|NC_011831|22|3037744-3037856|CRISPRCasFinder
GACCCTCACTCTTGTGTCCAATATCAGTATAGCAAACGTTCGATTGGATCGATCACCCACACATCTTCACGCTCGACCCTCACTCTTGTGTCCAATATCAGTATAGCAAACGT

>NC_011831|22|18|3037744-3037856|CRISPRCasFinder
GACCCTCACTCTTGTGTCCAATATCAGTATAGCAAACGT	TCGATTGGATCGATCACCCACACATCTTCACGCTC
GACCCTCACTCTTGTGTCCAATATCAGTATAGCAAACGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015941218.1\|3024575_3028106_+\|pullulanase-type-alpha-1,6-glucosidase	unknown	unknown	gnl\|CDD\|273974
NC_011831.1\|WP_085953514.1\|3044113_3045568_+\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|176462
NC_011831.1\|WP_015941224.1\|3034703_3035882_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NC_011831.1\|WP_015941234.1\|3050415_3050952_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	unknown	unknown	gnl\|CDD\|237597
NC_011831.1\|WP_015941231.1\|3047251_3048451_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NC_011831.1\|WP_015941226.1\|3037980_3039207_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941228.1\|3039658_3043441_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235868
NC_011831.1\|WP_015941219.1\|3028582_3030469_-\|molecular-chaperone-HtpG	unknown	unknown	gnl\|CDD\|235366
NC_011831.1\|WP_015941217.1\|3023840_3024416_+\|DUF1997-domain-containing-protein	unknown	unknown	gnl\|CDD\|370453
NC_011831.1\|WP_015941235.1\|3050985_3051552_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NC_011831.1\|WP_015941225.1\|3036343_3037591_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941233.1\|3049696_3050263_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NC_011831.1\|WP_015941237.1\|3052909_3053635_-\|DUF4013-domain-containing-protein	unknown	unknown	gnl\|CDD\|379068
NC_011831.1\|WP_015941221.1\|3031746_3032841_-\|iron-sulfur-cluster-carrier-protein-ApbC	unknown	unknown	gnl\|CDD\|378455
NC_011831.1\|WP_015941236.1\|3051565_3052228_-\|DUF4013-domain-containing-protein	unknown	unknown	gnl\|CDD\|379068
NC_011831.1\|WP_015941216.1\|3023401_3023647_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941220.1\|3030612_3031674_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|274250
NC_011831.1\|WP_015941223.1\|3033748_3034363_+\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|223678
NC_011831.1\|WP_015941222.1\|3033019_3033655_+\|ArsR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225222
NC_011831.1\|WP_015941230.1\|3045633_3047238_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213192

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_085953514.1\|3044113_3045568_+\|aspartate-ammonia-lyase	gnl\|CDD\|176462	cd01357, Aspartase, Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.	0
NC_011831.1\|WP_015941224.1\|3034703_3035882_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.92327e-57
NC_011831.1\|WP_015941234.1\|3050415_3050952_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	gnl\|CDD\|237597	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase.	2.16187e-107
NC_011831.1\|WP_015941231.1\|3047251_3048451_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	3.89028e-72
NC_011831.1\|WP_015941219.1\|3028582_3030469_-\|molecular-chaperone-HtpG	gnl\|CDD\|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NC_011831.1\|WP_015941228.1\|3039658_3043441_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235868	PRK06826, dnaE, DNA polymerase III DnaE; Reviewed.	0
NC_011831.1\|WP_015941235.1\|3050985_3051552_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	1.88627e-15
NC_011831.1\|WP_015941217.1\|3023840_3024416_+\|DUF1997-domain-containing-protein	gnl\|CDD\|370453	pfam09366, DUF1997, Protein of unknown function (DUF1997). This family of proteins are functionally uncharacterized.	4.27714e-10
NC_011831.1\|WP_015941233.1\|3049696_3050263_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	3.65669e-105
NC_011831.1\|WP_015941237.1\|3052909_3053635_-\|DUF4013-domain-containing-protein	gnl\|CDD\|379068	pfam13197, DUF4013, Protein of unknown function (DUF4013). This is a family of uncharacterized proteins that is found in archaea and bacteria.	2.98804e-10
NC_011831.1\|WP_015941221.1\|3031746_3032841_-\|iron-sulfur-cluster-carrier-protein-ApbC	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	3.28397e-143
NC_011831.1\|WP_015941236.1\|3051565_3052228_-\|DUF4013-domain-containing-protein	gnl\|CDD\|379068	pfam13197, DUF4013, Protein of unknown function (DUF4013). This is a family of uncharacterized proteins that is found in archaea and bacteria.	1.11876e-17
NC_011831.1\|WP_015941218.1\|3024575_3028106_+\|pullulanase-type-alpha-1,6-glucosidase	gnl\|CDD\|273974	TIGR02103, pullulanase-like_protein_starch, alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NC_011831.1\|WP_015941220.1\|3030612_3031674_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	6.87024e-166
NC_011831.1\|WP_015941223.1\|3033748_3034363_+\|superoxide-dismutase	gnl\|CDD\|223678	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism].	4.23821e-106
NC_011831.1\|WP_015941222.1\|3033019_3033655_+\|ArsR-family-transcriptional-regulator	gnl\|CDD\|225222	COG2345, COG2345, Predicted transcriptional regulator [Transcription].	6.92694e-39
NC_011831.1\|WP_015941230.1\|3045633_3047238_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	8.75113e-89

>NC_011831.1|WP_015941225.1|3036343_3037591_-|hypothetical-protein
MHSYHRFWLASLIGLLTLVLAACGGGNATPEPTAAPSPVAEQPTRTPRPTLAPRPTATPLPEPTATTVLGSQISLVDIGPLETYRHPSGVFQIDVPNNWTLQDNSSDTELQLVWVDPTGNGAIIVVLAESSRTLSDTELANLLTSYLNDRFGNQPDFSTEDPRPQRDGSQLIVWSYTATTDNNVRGTLLGNSFVEQRGNKVSILTTMIPQEQFEVLSTYTDRIINTYRINESVALSGGTAPESGNTTSTGSLAPVEIGELRTYTHPSGVFRIDLPVNWTLTENSRPGELILVWTDPTNNAAIVVDVLEDSTVYSDDQLIEKLVAFLKNSFGDQPDFFYEDPRPQNDGSILIIWGYTSTASNNVQASMLGNSFIEQRGDKVSVLTTLVPEEQFDTLVSKTDEIINTYRIDPSARVP
>NC_011831.1|WP_015941224.1|3034703_3035882_+|glycosyltransferase-family-4-protein
MRILQIHNDYREPGGETAVYRAEVALLQRHGHQVLTWQRDNTEIFTYNLYQKSAFLVNTIYNRQVYYNLQAFVRDKRPDVAHVHNVFPLISPSVYRALRKLGIPIVQTVHNYRFLCPNALFYTHGQICERCKYGNTLHAVRWQCYRKSYALSALYAVTIGLHRRWGTFEMIDRFIVLTPFVGQKLIEAGFTSANKINVLGNFLPDPLPAPGSFEHREPYVVYLGRLSPEKGVNVLLDALVDLSEIKLKIAGDGPQKEALQTKVQKQGLQVDFLGHVTGEKKSELLRRAMVAVVPSVCYETFSLAAIESMASGTPVVASDAGSLPFVVEGGKSGVLFRAGDSQDLQRKLAWLLAHPQKALAMGYYARRVVEQRYSASAHYNALMEIYNSVIKG
>NC_011831.1|WP_015941223.1|3033748_3034363_+|superoxide-dismutase
MAFEVPPLPYDYNALEPYIDEATMHYHHDNHHQTYVTNLNNALANYPDLQGKTIEELLSNLEAIPEAIRTAVRNNGGGHWNHTFFWEIMAPNAGGAPEGELAAAIDAAFGSFDAFKEKFKAAALGRFGSGWAWLITDKDGNLSIMSTPNQDNPLMEGKTAILGIDVWEHAYYLKYQYKRAAYVDAWWNVVNWAKVAEHYAAAKG
>NC_011831.1|WP_015941222.1|3033019_3033655_+|ArsR-family-transcriptional-regulator
MHKVERREQGATRRSILQLLRRHGQMSAVELSAALDIGAVGIRQHLAALEREGLVYICGLRRNVGRPAHLYALTERAERFFPKHYERLVCELFESVAAMGGEVAVQQVLEQRRNALNATLAPQLAGKSRATQVAILAEQLAEQGYMCECEQLENGDLLMTQYNCPFDCVARRFPQICDQELRLYEDLLATPIERDMTIAEGGHCCRYRIPG
>NC_011831.1|WP_015941221.1|3031746_3032841_-|iron-sulfur-cluster-carrier-protein-ApbC
MGLFSSNQPVQVTEEQILAALRQVQEPELGGDLVSRQMVKHIAICDGIVRCTIELTTPACPLKDQIRNDIVAAVSAVPGVKEVNVDFTANVRRPAGIPEQAAIPGVANVLAVAAGKGGVGKSTVAANLAVALAQMGAQVGLLDADVFGPSLPLMLGIHGQPAAVSDANGQPMMLPLTNHGIKVMSVGFLIDESQPVIWRGPMVSQLLRQFLYQVAWAPLDYLIIDMPPGTGDVALTLAQSLPLTGALIVTTPQQVATIDVIKAMEMFRKVNVPLLGIVENMAYFVAPDTGKRYNIFGSGGAERLARRLGVPLLGQIPLGMSVREGGDTGQPAVISDAPDAYAELFRELARQVAARISVLQYATG
>NC_011831.1|WP_015941220.1|3030612_3031674_-|GTP-3',8-cyclase-MoaA
MAANPLSGTTPIMFYEPARHPRYPTDTPALDQYGRRIDYLRVSLTDRCNMRCVYCMPAVGMQFAPRPELLTNDELLLVISAAARAGFRKLRLTGGEPTLRHDLVNLVRELKRIPGIEHIAMTTNALRLRKLAQSLREAGLDRVNISIDTLDPVKFRMMTRGGNLDEVWAGIEAADAAGLHPIKLNAVVVRGMNDEEVVRLAGLTLNRPWEFRFIEVMPLTGVAGLAEEGIVTSAELIARLEQCYGPLEEIGHAPSDPARTYRLPGAKGVIGFISSVSDPFCATCNRMRLTADGRLHLCLLRDDEVDLRAAVRSGASVDEIEQIIRHAVYIKPWGHGLPEGVKPTLRGMSELGG
>NC_011831.1|WP_015941219.1|3028582_3030469_-|molecular-chaperone-HtpG
MTTEPLTETGRQSHTFKAEVQQVLYILAHSLYTDREIFLRELISNASDAINRVQFEMLTNRDVRDPDLEPQITIEVNKEARTLTISDTGIGMTADEMVEHLGTIAQSAARAFVKQAGENAKQTASEIIGQFGVGFYSVFMVADKVTVVSQSYRPDAPAAMWESSGGDSFVVGPAERERRGTTITLHLKEDATEFTDPWRIEQIVRRHSNYVAFPIMLDGRQINARTALWRKAPRDVTTDEYNDYYRQLTLDSQPPLSYIHISTDAPVDLHAILYIPSRRERGILERRIEGQIKLYSRKVLILEEAKDLLPAHFRFIEGVVDSEDLPLNVSRESVQSGTAGGSPVMQRLRKTLTGRLHKELNDLAERDPEKYRTFWKEFGPFIKEGIATDYEHRNELLKLLRVQTTKSGEEWITLATYKERMVPGQKEIYYLMAASREAALNSPHLDPLRARDIEVILFTDLMDGFMLSGLREYEGLRLRNIDEGNLELPGEVTQPTPVIDDTQFTALAERIAATLGERLKEVRASKVLRDSPARLVADEAAFGREMQRIQQILGQEVQSGPRIMELNPAHPLIAALARRAAADPNDPLIPLAAEQLYDNALLIEGLHRDPAAMAPRILRLLEMAAGVV
>NC_011831.1|WP_015941218.1|3024575_3028106_+|pullulanase-type-alpha-1,6-glucosidase
MRLAWQQRALTALLFWLVLVWLVTVLPVAAQTTPNPKTVTIPGTIQSVLGCPGDWQPSCSITYLTYDPAVDVWSARFELPAGYYEYKVALNDSWAENYGLNARRDGPNIPLQVPAPTSVRFVYDHKTHWVTDSINTPLIVAVGDFQPALGCATADDPTCLGSWLQDPDGDGLYTFTTNRIPAGEYRLRLAIGETLESAVGEGGPNGPPFVIKVDEGGEVYVGYNAGSGEVTISTAGAPKGDISRARAYWVDAETIVWNVIGTPRYRYALFSDPSGAIKLTPQGVSGGQRIDLTFTPAGPGAALAKFPHLAGFSAFKLPPLDRARLIGLTRGQLVVAMYDENGQPLDATRVQIPGALDALFPYDGPLGVTIENGAPVIRVWAPTARQVRLHRFADANPDTRAVVLPMTLDAATGVWSIRGEASWIGQYYLFEVDVYVPSEGRVVTNLVTDPYSVALSANSTRSQIIDLNDPALQPPGWATLQKPPLAAPEDVVLYELHVRDFSILDETVPADLRGTFRAFTVRDSVGMRHLAELAKAGVTHVHLLPVFDIATIEEIRERQVPLPYDQLRALPPDSPEQQALIEPIRDLDGFNWGYDPYHYSVPEGSYSTNPDGPQRTLEFREMVQSLNQIGLRVVMDVVYNHTNASGQNPRSVLDRIVPGYYHRLDGDGNVTTSTCCANTATEHRMMEKLMIDSVVLWAKYYKVDGFRFDLMGHHMKDNMLAVRAALDALTLERDGVDGKSIIIYGEGWNFGEVANNARGINATQFNMAGTGIGTFSDRLRDAARGGGPFDDPRLQGFISGLATDPSDFPQGTPDAQRVKLLAETDLIKLGLAGNLKTYRMVNYEGRTVPGEQIKYRGAAGGYTLDPQEQIVYVSAHDNETLFDAIQLKAAASTPITERARMAQLGLSLTALAQGIPFFHAGDELLRSKSLDRNSYNSSDWFNRIDWRGQENTFGSGLPPAGDNQSNWPIMAPLLANPDLKPDEALMRATYDHFREMLRIRRSTPLFRLRTAEEVERMVSFFNNGPDQIPGLIVMSISDNGVTRVDPNIGQVVVLFNARPDAVTITIPELANGDLRLHDVQVASSDERVTQSRYQVDGTFSVPARTTAVFVGPRPLVVAPAPTTTATTAPIPTTVIPTATPEPAPTARNGGVPWWLWIGFAVVVLGGMGLLVTLRRR
>NC_011831.1|WP_015941217.1|3023840_3024416_+|DUF1997-domain-containing-protein
MPAPYTSSVASDDHRRAVDLSGAAVHLFRFNGPLELAYEYFCDIPAVFSLLPDVIEILAYGPNRYRLIVGATDGHGHAMAGYFDIAAVFEPFRAIRITPVDDGPPIDLTGFVFPGQLFAEAIFYPHAHGTDVEYNVELAMTIPVPKVLWFMPGHVLQAIGERAMEHKMSHMIGGFTRAIDADFHAWIGGNG
>NC_011831.1|WP_015941216.1|3023401_3023647_-|hypothetical-protein
MAVKESDGIFSMMFREIGFFWEQAWKWAEEQTKADREQEKVDQQRRLAEAQARLLEQIRLAKEAGLDVDRIMATIQQELKK
>NC_011831.1|WP_015941226.1|3037980_3039207_+|hypothetical-protein
MYRYLVILLMVWLSCSVPIAAAQSLPTFTLDFEGFADNLAINTYAGAVFGDGWRFGDVRSGRYNAPYPGACPDFGGMCAFTLNGNGFARVSGSGSGRIILPPGVVSFGVAVSTSDLVAVTAFAADGTVIATASVFANTFTGRLDRVTLTAPTNRTIKTIEISGLRDTWLIDDVEYAVVPTTVRPARVTLAQRIVDVARSGELLTLDLVLENYGRGPMMAATIELPFDETTLVLLDVRTSRVDVWVSEVKPGLITIRTGPLAAERDLVTMTIRFQVRVDAPVGMAIGREARLSYRDGVTEFGRGRSNLPRTVIGLGSELTHRRTPEITIAGQTLTYAAEGFAPGEPVGIWYNPPDGAPPVTVTTVRADGDGRVSGTLSLRDVPAGTYTLVLYSHHSQQTFVDEFVVGAR
>NC_011831.1|WP_015941228.1|3039658_3043441_-|DNA-polymerase-III-subunit-alpha
MHDFVHLHVHSEYSLLDGYATTKGIVQRAADLGMDSIALTDHGVLYGAMEFYEAAKKAGIRPIIGVEAYIAPGSLSDPMTKGAKNYFHLLLLAQNETGYRNLVKLTTRAHLDGMGKGVFARPRIDRHLLETYHEGLIVTSACVAGELLHHLKHGDRHTAVETAAYYRDLLGPDRYYIELQLHDNTPELEPLNDELVRIARELGIPLVATSDAHFIHPEDKETQHKVMAMGMNMTYAEFCTRGYAMDESYHIMSGEAMWARFKRYGTEPLENTRRISDMCRLKLEFGRVQLPVFELPEGHDAASYLRLVCEEGLMRRFNGQPPETYLRRLEYELDVINQTGFPDYMLIVWDYVKFARSRGIPCLPRGSAGASLVLYALGITDVDPVKNKLLFERFLSPERLEMPDIDTDFADSRRQEILDYIANKYGRENVAQIITYGTLGAKAAIRDMGRVLGLDPGEVDRVAKLIPSLPVGTTIAQAIERVPELKQIYETQPHLRELLIEAQKVEGRMRSVGTHACGVVVSRTPLEELVPLQRTTKDEHALMAAFEGATLAKMGLLKMDILGLTNLSVVAEALKYIEQTTGRRMWLDEIPLDDPKVFAALGRGETKNVFQLESAGMTRYLMQLQPTRVEDLYAMVALYRPGPLEQIPVYIQNKHNPSQIRYLHPVLEPILSDTYGVIVYQEQIMQLLQTVADYTLGQAYIVIKAISKKNKELMAENEAIFKQGCQRKGISKEVADQLWELILPFAGYSFNRPHATLYGLLSYQTAWLKVNYPVEYMTAVLTGAGGVIEDVTKAALEARRLGVAVLPPDVNRSHKGFTIEPLSPPLPEGVKYDRGIRFGLMAIKNVGEGPVEAIIAAREAGGPFRSLEDLCARVDRHALNKRTLESLIKAGALDSLPGSRRQKLAILDQAINAGVEAQKARDIGQSSLFDIFGESNTGSPNVARIPLPIITETPAEQKEVLRWEKELLGLNLSDDPIAKALEGIDLTGVTDLGSLEEEHVGETLTFVGVLSGVRRIATKKGDSMVVATLEDMTGSIEIVVFPKVLAKAADLLQNDAVVRVTAKVDNRRDTPQLVVESVETPSTIDQTTSPQPVEMDLEGMSDELSAELATDVPISLPDPSPQPPSVTTVSSPPAPSVTTTPPTAKPPTVRPRQPVKLANGNGQGNSNGQSKSGEPPRTDGPPSRNLRIYLPRTNNFDADVALMQHIHSLLSASQGNDHVTLYLPNGVGMVVLQSQQTIELSDALLNELRQLLGHERVLAA
>NC_011831.1|WP_085953514.1|3044113_3045568_+|aspartate-ammonia-lyase
MSFSGGSKGAKYMTERYRIERDSLGEMQVPAEALYGAQTQRAVLNFPVSGMRPYPAFVWAQTMIKRAAAEVNRDLGLLDPQIANAIIQAAEEVLAGQHADQFVVDPFQAGAGTSHNMNVNEVLANRANQILGYRLDDPKKPVSPNDHVNMAQSTNDTIPTAIRLGCLWRLNELLTAIDNLATALEQKAVEFDDVVKSGRTHLQDAVPVRLGQEFGAYAKAVRNDMERIATAADRLRRIGIGGTATGTGLNAHPEYHARMVAKLSELTGQELRSSGNLFESMQSMADPADFSASLRTLCITLGRIANDFRLLSSGPATGLDEIRLPAVQPGSSIMPGKVNPVLAEMLNMACYHVQGCDLTVALAAQAGQLELNVMMPIIAHNLFEMMHVLIGAINAFTTKCVVGITANREKAAGWLAKNAILVTALNPVIGYLNGAAVAKEAMATGKTIKEVVVEKGLLTAEQVDQLLDVYKMTEGGIQGIAAAG
>NC_011831.1|WP_015941230.1|3045633_3047238_-|ATP-binding-cassette-domain-containing-protein
MIELDRVSYTYPGATTPIFRQLSLHIAPGEFLLICGPSGAGKSTLLRLLNGLIPHFYGGTFGGRVRVWGRDTLTHQPRDLADLIGFVVQDPESQFVVERVEDEIVFAMENLGVPTPVMRRRVEEVLDQLAIAHLRHRHVATLSGGEQQRVAIAAALAAQPRALVLDEPTSQLDPHGAEEVLTALQKLNADLGITIILCEHRLERVVQYADRILYLTPNGQYEVGTPREVLSRIELRPPLQHLATALGWEPLPLTIKEGRRFVPTNLPAPPPTPPVSPPAPPLARLRNVTVQYGQHEALYRVNLDLPYGTLIALMGRNGSGKSTLLKTLIGLVRPTEGKIELEGRDIAPLTVEELARTVAYVPQDPHSILFHDTLHEELAFSLRGRGLPPSPTLIDTTLRKFGIAHLATHYPRNLSGGEAQRAALATALVGEPRLILLDEPTRGLDYQAKTTLITLLRRLCSEGRTVVIATHDVEMAAACADRVILLGEGEVVVEGPATELLGDSLLFSSQVAKLFPGYGWLTVAQALAGLGKTA
>NC_011831.1|WP_015941231.1|3047251_3048451_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MTGTTLSLPLPTLAEQFLLRRDITFLNHGSFGACPRPVFTVYQAWQRQLEAQPVAFLGRELSARLHNARTRLAAFVGASADELVFVPNVTYALNIVARSIDLQPGDEVLGTTHEYGAIERTWRYVCRQRGATYVNQPVKLPVATPTEIIDQLWSGVTPRTRVILLSHITSPTALIMPVAEICRRARAAGIITVIDGAHAPGQIDLNLTELGADFYGANCHKWLCAPKGAGFLYVRPEHQTRLEPLVVSWGWQPPEPLQGSFLAYPTGRPLQAYYEWMGTDDPSAFLSVPAAIDFQQTHHWPAVRNACHTLLREASTQILELSGLPPLSPADEQWWGQMRALPLPPCDPTQVQARLWHEWRVEVPCFMWEGQPLIRVSVQAYNSPTDIDRLLSGLRAIMS
>NC_011831.1|WP_015941233.1|3049696_3050263_+|aminoacyl-tRNA-hydrolase
MWLIVGLGNPGERYARTRHNIGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVKPQTYMNLSGQAVAALRQWYKIDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVGQLGTTEFPRLRIGIGQPPGQMDAADYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLTAAMNRYNPL
>NC_011831.1|WP_015941234.1|3050415_3050952_+|peptide-methionine-(S)-S-oxide-reductase-MsrA
MPLETATLAGGCFWCLEAVYDQVIGVKDVVSGYTGGHVPNPSYQRVCDGNTGHAEAVQIQFDPEQIGYRELLEIFFSIHDPTTLNRQGADVGTQYRSAIFYHSEEQRQIAEQLVRELTEQRVFRDPIVTEIVPASTFYPAEDYHQEYFARNPYQPYCQFVVAPKVAKFRKLFADKVAQ
>NC_011831.1|WP_015941235.1|3050985_3051552_-|CDP-alcohol-phosphatidyltransferase-family-protein
MALRNLIQPRELLYPSNLLTISRLLLLPATIYYMQRTDRRKRALLLLAITMITDALDGPIARRRGEVSKLGQILDPIADKALIDSAAVMLSRTRGFPWWATGLLIFRDVGILLAGLIVLRRKAQITTAESSGKLTTLAMTIAALLYLAGGPRWGKPALYAALIPFSLSFVQYGWRFIQIMRDDHPNAA
>NC_011831.1|WP_015941236.1|3051565_3052228_-|DUF4013-domain-containing-protein
MNLTRAFSFVFDDPDWWKIILVIGLLQFIPIIGQIALIGCLLQTARAVAQGNPQPLPRLNQLGTVLSEGIYGLLIAIVYYLPILAIVCILSCILVAIIVASGNNDPQPGIFFGLLLCLNLILIPLILITQLLLIIGNSRYVQTGSVEAALQLGEVFTLLRRNPAEWLVLWLLSIVCNFVGGLGSIIFVVGSLFTTVYAALVFGHLLGQTVHQVSSSPSQQ
>NC_011831.1|WP_015941237.1|3052909_3053635_-|DUF4013-domain-containing-protein
MFAPPPPPTTLPAAVAVVCRDPTWWQKCLLHGALATTIIGLPLAVGFIMESYDNSRRGFPIPLPPWRDWTLRALTGIFVLLIDLAFFLLPLMIGGLLLACSGLALVLAGQTDLLEVVMGGILALMALVWLSFFLIGVAPIGRLIFAEEGQIERALSSETLRRAFTPPYRTYFWHARLASLAAYIPAAAMAGLTGILIVNNAPLLVIVIAIWLLCSVGIFAQLVGVQLYVAAEQQAHATQRL

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Crispr_ID: NC_011831_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_23

3104633-3104728

TypeV

Consensus_repeat	Method
TCCCCTTTTCAGGAATTAGGCTTCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_23

>merge|NC_011831|23|3104633-3104728|CRISPRCasFinder
TCCCCTTTTCAGGAATTAGGCTTCTAAAGATTTCTCCACGGCATAGCCGGGAAACAATCCTTCGTCCCAGTCCCCTTTTCAGGAGTTAGGCTTCTA

>NC_011831|23|19|3104633-3104728|CRISPRCasFinder
TCCCCTTTTCAGGAATTAGGCTTCTA	AAGATTTCTCCACGGCATAGCCGGGAAACAATCCTTCGTCCCAG
TCCCCTTTTCAGGAGTTAGGCTTCTA

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015941281.1\|3108973_3111967_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NC_011831.1\|WP_015941283.1\|3112761_3113112_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NC_011831.1\|WP_015941286.1\|3115711_3116377_-\|SOS-response-associated-peptidase	unknown	unknown	gnl\|CDD\|376837
NC_011831.1\|WP_157044869.1\|3103994_3104345_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223970
NC_011831.1\|WP_015941270.1\|3097955_3098603_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NC_011831.1\|WP_015941280.1\|3108025_3108811_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224561
NC_011831.1\|WP_015941278.1\|3106224_3107085_+\|deoxyribonuclease-IV	unknown	unknown	gnl\|CDD\|179214
NC_011831.1\|WP_015941277.1\|3105964_3106141_+\|DUF2256-domain-containing-protein	unknown	unknown	gnl\|CDD\|378353
NC_011831.1\|WP_015941267.1\|3095795_3096119_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380366
NC_011831.1\|WP_015941268.1\|3096094_3096859_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	unknown	unknown	gnl\|CDD\|319973
NC_011831.1\|WP_157044870.1\|3104476_3104572_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|310737
NC_011831.1\|WP_015941271.1\|3098599_3099532_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NC_011831.1\|WP_015941279.1\|3107136_3108033_+\|helix-hairpin-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378965
NC_011831.1\|WP_015941272.1\|3099657_3100272_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NC_011831.1\|WP_041471047.1\|3097046_3097898_+\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
NC_011831.1\|WP_157044921.1\|3100332_3101052_+\|heme-ABC-transporter-permease-CcmB	unknown	unknown	gnl\|CDD\|225260
NC_011831.1\|WP_015941285.1\|3114415_3115708_+\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NC_011831.1\|WP_015941284.1\|3113263_3114325_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226125
NC_011831.1\|WP_015941282.1\|3111967_3112717_-\|anti-sigma-factor-antagonist	unknown	unknown	gnl\|CDD\|379279
NC_011831.1\|WP_015941274.1\|3101106_3102801_-\|methylmalonyl-CoA-mutase-family-protein	unknown	unknown	gnl\|CDD\|239652

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015941281.1\|3108973_3111967_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	1.04202e-56
NC_011831.1\|WP_015941283.1\|3112761_3113112_-\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	3.24823e-29
NC_011831.1\|WP_015941286.1\|3115711_3116377_-\|SOS-response-associated-peptidase	gnl\|CDD\|376837	pfam02586, SRAP, SOS response associated peptidase (SRAP). The SRAP family functions as a DNA-associated autoproteolytic switch that recruits diverse repair enzymes onto DNA damage. We propose that the human protein Q96FZ2:UniProtKB, the eukaryotic member of the SRAP family, which has been recently shown to bind specifically to DNA with 5-hydroxymethylcytosine, 5-formylcytosine and 5-carboxycytosine, is a sensor for these oxidized bases generated by the TET (tetrahedral aminopeptidase of the M42 family) enzymes from methylcytosine. Hence, its autoproteolytic activity might help it act as a switch that recruits DNA repair enzymes to remove these oxidized methylcytosine species as part of the DNA demethylation pathway downstream of the TET enzymes.	1.1604e-108
NC_011831.1\|WP_157044869.1\|3103994_3104345_-\|hypothetical-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	4.48331e-31
NC_011831.1\|WP_015941270.1\|3097955_3098603_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.000147965
NC_011831.1\|WP_015941280.1\|3108025_3108811_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	1.12999e-43
NC_011831.1\|WP_015941278.1\|3106224_3107085_+\|deoxyribonuclease-IV	gnl\|CDD\|179214	PRK01060, PRK01060, endonuclease IV; Provisional.	3.61316e-119
NC_011831.1\|WP_015941277.1\|3105964_3106141_+\|DUF2256-domain-containing-protein	gnl\|CDD\|378353	pfam10013, DUF2256, Uncharacterized protein conserved in bacteria (DUF2256). Members of this family of hypothetical bacterial proteins have no known function.	3.43102e-17
NC_011831.1\|WP_015941267.1\|3095795_3096119_+\|cupin-domain-containing-protein	gnl\|CDD\|380366	cd02238, cupin_KdgF, pectin degradation protein KdgF and related proteins, cupin domain. This family includes bacterial and archaeal pectin degradation protein KdgF that catalyzes the linearization of unsaturated uronates from both pectin and alginate, which are polysaccharides found in the cell walls of plants and brown algae, respectively, and represent an important source of carbon. These polysaccharides, mostly consisting of chains of uronates, can be metabolized by bacteria through a pathway of enzymatic steps to the key metabolite 2-keto-3-deoxygluconate (KDG). Pectin degradation is used by many plant-pathogenic bacteria during infection, and also, pectin and alginate can both represent abundant sources of carbohydrate for the production of biofuels. These proteins belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	8.08889e-37
NC_011831.1\|WP_015941268.1\|3096094_3096859_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl\|CDD\|319973	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family. Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).	1.92322e-66
NC_011831.1\|WP_157044870.1\|3104476_3104572_+\|hypothetical-protein	gnl\|CDD\|310737	pfam06347, SH3_4, Bacterial SH3 domain. This family consists of several hypothetical bacterial proteins of unknown function. These are composed of SH3-like domains.	0.00301017
NC_011831.1\|WP_015941271.1\|3098599_3099532_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.03332e-35
NC_011831.1\|WP_015941279.1\|3107136_3108033_+\|helix-hairpin-helix-domain-containing-protein	gnl\|CDD\|378965	pfam12836, HHH_3, Helix-hairpin-helix motif. The HhH domain is a short DNA-binding domain.	7.87388e-22
NC_011831.1\|WP_015941272.1\|3099657_3100272_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	6.66181e-48
NC_011831.1\|WP_041471047.1\|3097046_3097898_+\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	8.55029e-119
NC_011831.1\|WP_157044921.1\|3100332_3101052_+\|heme-ABC-transporter-permease-CcmB	gnl\|CDD\|225260	COG2386, CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones].	1.25995e-17
NC_011831.1\|WP_015941285.1\|3114415_3115708_+\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NC_011831.1\|WP_015941284.1\|3113263_3114325_+\|hypothetical-protein	gnl\|CDD\|226125	COG3597, COG3597, Uncharacterized protein/domain associated with GTPases [Function unknown].	0.0098178
NC_011831.1\|WP_015941282.1\|3111967_3112717_-\|anti-sigma-factor-antagonist	gnl\|CDD\|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	5.72503e-39
NC_011831.1\|WP_015941274.1\|3101106_3102801_-\|methylmalonyl-CoA-mutase-family-protein	gnl\|CDD\|239652	cd03680, MM_CoA_mutase_ICM_like, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, isobutyryl-CoA mutase (ICM)-like subfamily; contains archaeal and bacterial proteins similar to the large subunit of Streptomyces cinnamonensis coenzyme B12-dependent ICM. ICM from S. cinnamonensis is comprised of a large and a small subunit. The holoenzyme appears to be an alpha2beta2 heterotetramer with up to 2 molecules of coenzyme B12 bound. The small subunit binds coenzyme B12. ICM catalyzes the reversible rearrangement of n-butyryl-CoA to isobutyryl-CoA, intermediates in fatty acid and valine catabolism, which in S. cinnamonensis can be converted to methylmalonyl-CoA and used in polyketide synthesis.	0

>NC_011831.1|WP_157044870.1|3104476_3104572_+|hypothetical-protein
MLPVPQLSRLAAGMVGRVVEERDNWRRIALR
>NC_011831.1|WP_157044869.1|3103994_3104345_-|hypothetical-protein
MPLHPTRLRERGFNQAAELAARLQRPGAPPLIDGLARVRATNQQARLEAPARTANVAGAFVWVGSTPPPPRIILIDDVLTTGATLAACAAALRTAGAHAVRALALARSVIDDAPRP
>NC_011831.1|WP_015941274.1|3101106_3102801_-|methylmalonyl-CoA-mutase-family-protein
MMSEIEQLNAAQQQWEQQCLWPTLKRTPERPGPFMTTSSAPVERLYTPLDLATNGQSLTEHFLHNIGYPGQYPFTRGIHPTGYRGKLWTMRMFAGFGSAEETNARFKFLLEQGQTGLSIAFDMPTLYGRDTDHPLVEGEFGKCGVAVSSLADMEILLDGLPLDQVSTSMTINSPAAMIWAMYLVVAEKRGIPWSKLRGTIQNDILKEYIAQNEYIFPPEPSMRLVVDTIEFATRHVPQWNPISVSGYHIREAGSTAVQELAFTLADGFAYVEAALERGLDIDEFAPRISFFFNAHNDFFEEIAKYRAARRIWARAMRERYGAKNERSWWLRFHTQTAGCSLTAQQPEINIVRTAIQALAAVLGGTQSLHTNSMDEALALPSEKAVTIALRTQQIIAYESGVANTVDPLGGSYFVEALTDRMEREAQQIFDAINAQGGVIAAIRNGYFHREIADAAYRYQQEIDKGERIIVGVNAFQADEPLEIPILQMDPEGEKRHLERLNRVRRERDQDLVARRLAELRAAAQGSDNMMPAILNCVRAYCTLGEMCDVLREVFGVYQQDTVIV
>NC_011831.1|WP_157044921.1|3100332_3101052_+|heme-ABC-transporter-permease-CcmB
MIDIPAPPPSGIGVTLRAAWAIFRKDLACELRTRYAINTLLLFAISATTAVSLGVGFLGLRRTEEALLIQSALLWVALLFAALNGLSRSFVYEEEARTLAALRLSASPTAVFLGKFCFNLTLILVLALVTSLLFIVLLRVKVGSPLAFSAILATGGLALTSATTIIAAIIARASFKGALFAVLAFPLLVAPLIIAIQGTAQSLENVAVDVVFGPIRFLLAYVVVTFIASLILFPFVWEA
>NC_011831.1|WP_015941272.1|3099657_3100272_+|ABC-transporter-ATP-binding-protein
MQLHVLQLSAGYGGRTILRDLGFTLHRGEVLVVSGPNGSGKSTLLRILAGLQVPSGGLVYYEIGDRRFDPRDARHLIGWVAPDLALYRELSGLENLRFFAQVRGLTISDEALNELLTYVGLGQRGNDRLAAYSSGMTQRLRYAFALLHRPPVLLLDEPTVTLDERGAAVVERIIAAQRQRGLTVIATNDPRELRYADLLVKLGG
>NC_011831.1|WP_015941271.1|3098599_3099532_+|alpha/beta-hydrolase
MSIIVIDNQRVHYEVFGRGRPVVFLHGWLGSWRYWYTTMEIVSRYFRTYSFDFWGFGESRTSEMPTISGYSQQVIRFLDAMGIEKAALVGHSMGGMVAMKTAIEHPGRLMRVVTVGAPINGNSLSWMLKLVDRPFFAEFFARRPWLRRSLFRFFFGDSLDPEVDEVLEDSTKSTADTIRAAIHSMWRTDLTPMLGNLRVPALVVHGAHDDIVNPNQLQLFTHIPMAQVVRMEQSRHFPFVDEADRFHEILLAFLQQPDPLTLSAQRTTASQGPSQPTSPSSEPNNIVDSGEAMIPPPIAPPSRLRVPPGR
>NC_011831.1|WP_015941270.1|3097955_3098603_+|hypothetical-protein
MTALFVALGIAIITLLFILLWYVPHLLQQQAGRSAREAAQLRDMLLDMLNEQEAVMQRQAQLSAAMTNLQQQLSQLTAMSPSSSTGAVDTAVVRQLEDRITALQQQIQRWIEVRGRQQHQHDVSESEAWANLLGLLAAIQERIAQLSTERTLVAAGLQARTLLEELEHEMAHLRSISEDIATLQWRLRRSLHERETSVAQLRARAVGSSSTARPV
>NC_011831.1|WP_041471047.1|3097046_3097898_+|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MIIQQALRVATARLQSISPTARLDAELLLAHILGWSRARVVAEREVVLTPAQQEAFGALVERRAAREPVAYLIGHWPFFGLDLVVDRRVLIPRPETELLVELALTEARRYADTQITIADIGVGSGAIAIALAIHVPHATVYGVDRSADALAVAARNVARYNLSDRVVLLEGDLLTPVPGPVDLIVSNPPYTILAEVDESVYRYEPHLALDGGPDGLDCYRRLIAAAPAYLKPGGAILLEIGAWQAEAVAHLLNQALPHAEVGVQRDLAGRDRVVWARNRDVIR
>NC_011831.1|WP_015941268.1|3096094_3096859_-|metalloregulator-ArsR/SmtB-family-transcription-factor
MKTPNLSSAFTGLRLLADETRWKLISELRESDRQVAELVARTGLAQNLVSYHLHVLRQSELVNTHRSDADGRVVYYSLSLTALARLLAQVSEELAIPTTPPPSLPHVKVAFLCRANSARSQMAEGWLRVLSNGQVVALSAGTHPQPVHPLAIAVMQEAGVPIDRHVAKPIDAILNQKPDVIVTVCDIARETCPVWPEATRSIHWSIADPAAVVGSEEECRAAFVAARDTIHERVRGLLALLPRWFADQSPSAVR
>NC_011831.1|WP_015941267.1|3095795_3096119_+|cupin-domain-containing-protein
MPERPWIELFPGVWRRRIALTDRMYQMEVRLAAGSHVPLHSHPEDQVAYIVSGHLRFQVGDNLLEATAGQSVPIPGGIPHAVWTLADTLAIDTFSPPRTDYLTADGD
>NC_011831.1|WP_015941277.1|3105964_3106141_+|DUF2256-domain-containing-protein
MARTKLTNATARTPRRKGQLPTKVCAGCSRPFEWRKKWARCWDEVRYCSERCRRASRL
>NC_011831.1|WP_015941278.1|3106224_3107085_+|deoxyribonuclease-IV
MPRFGAHMSISGGVSKSFARGESVGLDAMQIFAKNERQWTAKPISAEEMAAFQAEQQRTGIHPVIVHDSYLINLAAPADDLREKSIVAFADELERCAQLKIPYLVTHPGAHTGIGEEAGLVRVADAISRLLAEGVGGTTMILLETTAGQGTALGYRFEHLARLFELIPYHDRLGVCVDTCHIFAAGYDIRDPDTYDATFAELDRLVGLERVKCFHLNDSQKDLGSRVDRHAHIGQGCIGTEAFRLLVNDPRFAHLPMIIETPKGEDMAEDRMNLALLRSLVRITAA
>NC_011831.1|WP_015941279.1|3107136_3108033_+|helix-hairpin-helix-domain-containing-protein
MWRKLLFVVLLVGIGYLIWRRMQSGTEALPSFAPPPGKPATPQSTLPTSSSAEGGPRPVVTRVHRGAPPPPTPTSAAPSGTSTSGPRPVVTRVHRGAPPEPRRRPMSTGETMVNRNGTGESSSDQVSSAPVLSEVSPPLSEVPSSATLVTQVREPEAAVPSAPAASAAAVREPEAAVPSAPAASAAAVREPEAAVPSAPAASAAAAAPATPDTRSEEEEIAALIEASAAVEFVPVDINRADRATLITLPGIGPVLADRIIAYREAHGPFKSVDDLIAVSGIGERNINAFRKLVYVTHD
>NC_011831.1|WP_015941280.1|3108025_3108811_+|alpha/beta-fold-hydrolase
MTEPYLLPRGNHACLLIHGFVGDPGEMRSLADYLAEAGLTVLGVRLPGHTGHPEDLMAVSWRDWLAAVRQAFDWLTDCYATVSVIGFSLGGALAALLAAERPVHRLVMLATPYRLGGDWRIDVLGVARYVVPWFYLLAQADFSSPDLRASIWRRQPDLDLDDPAIQQMLRRSIKVSVAAIDELRLALAATRRVLPEVRTPVLIVHGRDDNTADPASASAIAARIGGVRCEIVYYPATGHQLLLTGPHRQMIFHRIGRFLSR
>NC_011831.1|WP_015941281.1|3108973_3111967_-|SpoIIE-family-protein-phosphatase
MSREHLLTWYGLIVGGVVWGWLLLLPTVPTVPALVVLFAVLAFAVDLLAFRTPPADVHSLAPLVLVSASLALGPIPAAWIAAVEGFVSGVTILLQTNRPRTLFSLLGRPLLRSGLRALGLLVGAWLATMSSGQPLTALPMSHVFGWTLLSFPFVTQLGRIVRELLQGGYSGLATWWRSAWPAILGAEIAPLPLAWLGAAIAHDLGMLHLILAGGALVASAAILRRSSLNLQRQRRSMRELARLNEVSRAIIRSELDVDALCELIYREASRIVDTSSFHLGLFNGHSYTLVVRVQDRVRLPRLTVDLSENSGLIGWIRETGRAILVEDFTREMDRLPARPRYQSERPPRSGIYVPLIAGETVIGSISVQSYEPSAFDANDLRLISLIADQAAVAIARARAFHEARQRANQLQAIREVSQQITAILNLDRLLPSIVQLIRERFGYHPVHIFTLSPDDERIYFRASTADGADLERLRALSLRIGQGLVGEAVQRGEPVLVGDVLNDHRAIRDTLQTRSELAVPLRVGTTVIGVLDVQSDEPDDFDEDDLFVIRTLADQIAIAIESANAYTAQQEEAWTLNALLQIAENIGRATTLSDLLATVVRLPSLLMGCPRCYVALWDREQGDFVVRAVYGLPTTARTGVLNQPTRSPFLWRLRERAAETDQSRLELLWQAQDNADQWPTLITAARSGTLVGLPISARNTLLGVLVLDYNDPFVSPSTRQQNLCTGAAAQIAGALESLLLAAEAAEAARLEQELRVAREIQQSLLPSRLPNVAGWQIEATWQSARLVGGDFYDFWSLPTGTEPPRELGFVIADVSDKGIPAAMFMTMARSLVRAAALDGSAPARAMERANRWLYRDSESGMFVTLFYARLDLITGQLCYTCAGHNPPLLYRAATGEIEELRTPGIALGVLPEVTLAEAETRLAPEDVLVCYTDGATETINELLVPFDVDGLRAVIKAYATGSAATIMQAILAAVARHSHGQPPFDDITLIVIKRAST
>NC_011831.1|WP_015941282.1|3111967_3112717_-|anti-sigma-factor-antagonist
MESITLTADLDALAKISAFITAAAERCGLDERATWQVQLAVDEAVTNVIQHAYDPDQPGDLTLSWQCHDHRFIVTVRDHGRQFDPNAVPVPDITSPLEERQVGGLGIYLITRLMDEVRFEFSPQGGNLLTMVKYLPHDQPDSSDEVQVIQVHDRIDALTAPRLTKLVSERISQGARQIVLDLSAVSFLSSSGLRALLLIRKELMTLGGELRLAALQPQVYEVFTITGFTQVFNIHPSVAEARTAFSQRR
>NC_011831.1|WP_015941283.1|3112761_3113112_-|STAS-domain-containing-protein
MELTHRRLNRVDLIEVIGRVDAATAPQLKQLIESIFNDGRYRIVLDLSRLEYISSPGLRVLIEARKKAREWKITDLEGGDVRIANLPPRIKEVFDLTGFSSLFEIYGDTVEAVGSF
>NC_011831.1|WP_015941284.1|3113263_3114325_+|hypothetical-protein
MPKWNDLSVAFNTLREIDVAAIRTEAERPLTIVCVGAVGVCQEIATRLERGTQRYGPIGPSPIQLASLATIISDELRSVDLIIIGLERTTRLSARELTTIDQLAALALPTVVVVWGTALPADAGPLHPRVAHARLLVVPDPMAPDVDEQLASAILDRLPAELHLAAARRLPGLRATVARQLINNVSFTNASYVLATALPAQIPIFNVPFAAADILVLTKNQAILVYRLALAYGAPPDIRERLREVLPVIGGAFIWRQLARSLVGLIPIWGVAPKVAIAYAGTYTTGMAAWRWFTEGEIIDQARLKELGREALALGRARAADLIAQARRTGAVQVDRWQRWGEALRSRFRRKEK
>NC_011831.1|WP_015941285.1|3114415_3115708_+|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MDHFVIEGGYRLSGSIRPAGNKNAALPLLAASLLTDKPVTLRNIPDIGDVRTKLALLNNLGVQIEQPAPNVVQLHAAHLAKHDPDVALARRIRTSPLLAGPLLFRRGYVTLPRPGGDAIGRRRLDTHLLALQALGVHVEVTPTSYILTTEGLRGADLFLDEMSVTGTEQAIIAASVAEGHTTIANAASEPHVQDLCHFLNQMGARISGIGTNLLEIEGVSRLRGADYTIGPDFMEVGSLIGLAAVTRSELRIVDARPREHRMTRIMFGRLGVTWREEGNDIIVPADQELVVRHDLHGAIPKIDSAPWPGFNPDLISTAIVIATQAQGTVLIHEKMFESRLFFVDRLIGMGARIVLCDPHRVVVVGPSQLYGEPDGLPSPDIRAGMALVTAALCAKGRSVIYNIGQIDRGYERIEERLAALGARIKRVRSS
>NC_011831.1|WP_015941286.1|3115711_3116377_-|SOS-response-associated-peptidase
MCGRYTLAVSPAKLAERFALPPISDLQPRYNIAPTQPVVVVREGNDGREGVYMRWGLIPSWAKDASVGAKLINARSETVLEKPSFRTAFRRRRCLIPASGFYEWQTTATGKRPFYFTLPDDDLMAFAGLWEQWLAPDGEVIESCTILTTTANEIVTPIHNRMPVIVPSEFTAFWLDPATDIPRLHAFCLTPPPVALHRYPVGKAVNQVRNDGPALIEPAAL

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Crispr_ID: NC_011831_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_24

3107297-3107432

TypeV

Consensus_repeat	Method
GTGGGCCGCGTCCGGTGGTGACGCGGGTGCATCGTGGTGCGCCGCC	CRISPRCasFinder

1 spacers

cas14j

The CRISPR arrays of NC_011831_24

>merge|NC_011831|24|3107297-3107432|CRISPRCasFinder
GTGGGCCGCGTCCGGTGGTGACGCGGGTGCATCGTGGTGCGCCGCCGCCACCGACACCAACGAGTGCTGCTCCTAGTGGTACCTCTACGAGTGGGCCGCGTCCGGTGGTGACGCGGGTGCATCGTGGTGCGCCGCC

>NC_011831|24|20|3107297-3107432|CRISPRCasFinder
GTGGGCCGCGTCCGGTGGTGACGCGGGTGCATCGTGGTGCGCCGCC	GCCACCGACACCAACGAGTGCTGCTCCTAGTGGTACCTCTACGA
GTGGGCCGCGTCCGGTGGTGACGCGGGTGCATCGTGGTGCGCCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015941281.1\|3108973_3111967_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NC_011831.1\|WP_015941283.1\|3112761_3113112_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NC_011831.1\|WP_015941289.1\|3118088_3121238_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173800
NC_011831.1\|WP_015941272.1\|3099657_3100272_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NC_011831.1\|WP_157044869.1\|3103994_3104345_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223970
NC_011831.1\|WP_015941270.1\|3097955_3098603_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NC_011831.1\|WP_157044871.1\|3116941_3117697_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941278.1\|3106224_3107085_+\|deoxyribonuclease-IV	unknown	unknown	gnl\|CDD\|179214
NC_011831.1\|WP_015941276.1\|3104725_3105838_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NC_011831.1\|WP_157044870.1\|3104476_3104572_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|310737
NC_011831.1\|WP_015941271.1\|3098599_3099532_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NC_011831.1\|WP_015941286.1\|3115711_3116377_-\|SOS-response-associated-peptidase	unknown	unknown	gnl\|CDD\|376837
NC_011831.1\|WP_015941280.1\|3108025_3108811_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224561
NC_011831.1\|WP_015941277.1\|3105964_3106141_+\|DUF2256-domain-containing-protein	unknown	unknown	gnl\|CDD\|378353
NC_011831.1\|WP_157044921.1\|3100332_3101052_+\|heme-ABC-transporter-permease-CcmB	unknown	unknown	gnl\|CDD\|225260
NC_011831.1\|WP_015941285.1\|3114415_3115708_+\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NC_011831.1\|WP_015941284.1\|3113263_3114325_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226125
NC_011831.1\|WP_015941287.1\|3116397_3116811_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941282.1\|3111967_3112717_-\|anti-sigma-factor-antagonist	unknown	unknown	gnl\|CDD\|379279
NC_011831.1\|WP_015941274.1\|3101106_3102801_-\|methylmalonyl-CoA-mutase-family-protein	unknown	unknown	gnl\|CDD\|239652

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015941281.1\|3108973_3111967_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	1.04202e-56
NC_011831.1\|WP_015941283.1\|3112761_3113112_-\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	3.24823e-29
NC_011831.1\|WP_015941289.1\|3118088_3121238_+\|S8-family-serine-peptidase	gnl\|CDD\|173800	cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins. The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	1.60327e-53
NC_011831.1\|WP_015941272.1\|3099657_3100272_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	6.66181e-48
NC_011831.1\|WP_157044869.1\|3103994_3104345_-\|hypothetical-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	4.48331e-31
NC_011831.1\|WP_015941270.1\|3097955_3098603_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.000147965
NC_011831.1\|WP_015941278.1\|3106224_3107085_+\|deoxyribonuclease-IV	gnl\|CDD\|179214	PRK01060, PRK01060, endonuclease IV; Provisional.	3.61316e-119
NC_011831.1\|WP_015941276.1\|3104725_3105838_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.41922e-48
NC_011831.1\|WP_157044870.1\|3104476_3104572_+\|hypothetical-protein	gnl\|CDD\|310737	pfam06347, SH3_4, Bacterial SH3 domain. This family consists of several hypothetical bacterial proteins of unknown function. These are composed of SH3-like domains.	0.00301017
NC_011831.1\|WP_015941271.1\|3098599_3099532_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.03332e-35
NC_011831.1\|WP_015941286.1\|3115711_3116377_-\|SOS-response-associated-peptidase	gnl\|CDD\|376837	pfam02586, SRAP, SOS response associated peptidase (SRAP). The SRAP family functions as a DNA-associated autoproteolytic switch that recruits diverse repair enzymes onto DNA damage. We propose that the human protein Q96FZ2:UniProtKB, the eukaryotic member of the SRAP family, which has been recently shown to bind specifically to DNA with 5-hydroxymethylcytosine, 5-formylcytosine and 5-carboxycytosine, is a sensor for these oxidized bases generated by the TET (tetrahedral aminopeptidase of the M42 family) enzymes from methylcytosine. Hence, its autoproteolytic activity might help it act as a switch that recruits DNA repair enzymes to remove these oxidized methylcytosine species as part of the DNA demethylation pathway downstream of the TET enzymes.	1.1604e-108
NC_011831.1\|WP_015941280.1\|3108025_3108811_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	1.12999e-43
NC_011831.1\|WP_015941277.1\|3105964_3106141_+\|DUF2256-domain-containing-protein	gnl\|CDD\|378353	pfam10013, DUF2256, Uncharacterized protein conserved in bacteria (DUF2256). Members of this family of hypothetical bacterial proteins have no known function.	3.43102e-17
NC_011831.1\|WP_157044921.1\|3100332_3101052_+\|heme-ABC-transporter-permease-CcmB	gnl\|CDD\|225260	COG2386, CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones].	1.25995e-17
NC_011831.1\|WP_015941285.1\|3114415_3115708_+\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NC_011831.1\|WP_015941284.1\|3113263_3114325_+\|hypothetical-protein	gnl\|CDD\|226125	COG3597, COG3597, Uncharacterized protein/domain associated with GTPases [Function unknown].	0.0098178
NC_011831.1\|WP_015941282.1\|3111967_3112717_-\|anti-sigma-factor-antagonist	gnl\|CDD\|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	5.72503e-39
NC_011831.1\|WP_015941274.1\|3101106_3102801_-\|methylmalonyl-CoA-mutase-family-protein	gnl\|CDD\|239652	cd03680, MM_CoA_mutase_ICM_like, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, isobutyryl-CoA mutase (ICM)-like subfamily; contains archaeal and bacterial proteins similar to the large subunit of Streptomyces cinnamonensis coenzyme B12-dependent ICM. ICM from S. cinnamonensis is comprised of a large and a small subunit. The holoenzyme appears to be an alpha2beta2 heterotetramer with up to 2 molecules of coenzyme B12 bound. The small subunit binds coenzyme B12. ICM catalyzes the reversible rearrangement of n-butyryl-CoA to isobutyryl-CoA, intermediates in fatty acid and valine catabolism, which in S. cinnamonensis can be converted to methylmalonyl-CoA and used in polyketide synthesis.	0

>NC_011831.1|WP_015941278.1|3106224_3107085_+|deoxyribonuclease-IV
MPRFGAHMSISGGVSKSFARGESVGLDAMQIFAKNERQWTAKPISAEEMAAFQAEQQRTGIHPVIVHDSYLINLAAPADDLREKSIVAFADELERCAQLKIPYLVTHPGAHTGIGEEAGLVRVADAISRLLAEGVGGTTMILLETTAGQGTALGYRFEHLARLFELIPYHDRLGVCVDTCHIFAAGYDIRDPDTYDATFAELDRLVGLERVKCFHLNDSQKDLGSRVDRHAHIGQGCIGTEAFRLLVNDPRFAHLPMIIETPKGEDMAEDRMNLALLRSLVRITAA
>NC_011831.1|WP_015941277.1|3105964_3106141_+|DUF2256-domain-containing-protein
MARTKLTNATARTPRRKGQLPTKVCAGCSRPFEWRKKWARCWDEVRYCSERCRRASRL
>NC_011831.1|WP_015941276.1|3104725_3105838_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MVELKAYQYRLTPTKGQVRLLEQTLELCRWVYNETLAYRKQIWEQQRLHIEPGKTNALLASWKTSHPELKRIHYHVLQDIQKRVHRACEAFVRRINRGQKAGFPRFKGRGWYDSFTFRQVGYSLSINGQWINLFNIGRVRMILHRRIEGTIKTLTIRRTRTRKWYASFVVETQSKPLLPTNRAVGVDVGLHQFATLSTGEVIANPRFFRKDEKALRKAQRRLAKTEQNTTERAKRQKVVAHIHERITNRRKDFAHKLSRRLVNEFDVIVFEQLRIAQMIKARRLAKSISDAAWRQLITYTHYKAASAGRMFVEVDPRGTSQRCSRCRSIVKKDLSTRQHRCQTCGLEIDRDHNAALNILAVGLHSLGRNP
>NC_011831.1|WP_157044870.1|3104476_3104572_+|hypothetical-protein
MLPVPQLSRLAAGMVGRVVEERDNWRRIALR
>NC_011831.1|WP_157044869.1|3103994_3104345_-|hypothetical-protein
MPLHPTRLRERGFNQAAELAARLQRPGAPPLIDGLARVRATNQQARLEAPARTANVAGAFVWVGSTPPPPRIILIDDVLTTGATLAACAAALRTAGAHAVRALALARSVIDDAPRP
>NC_011831.1|WP_015941274.1|3101106_3102801_-|methylmalonyl-CoA-mutase-family-protein
MMSEIEQLNAAQQQWEQQCLWPTLKRTPERPGPFMTTSSAPVERLYTPLDLATNGQSLTEHFLHNIGYPGQYPFTRGIHPTGYRGKLWTMRMFAGFGSAEETNARFKFLLEQGQTGLSIAFDMPTLYGRDTDHPLVEGEFGKCGVAVSSLADMEILLDGLPLDQVSTSMTINSPAAMIWAMYLVVAEKRGIPWSKLRGTIQNDILKEYIAQNEYIFPPEPSMRLVVDTIEFATRHVPQWNPISVSGYHIREAGSTAVQELAFTLADGFAYVEAALERGLDIDEFAPRISFFFNAHNDFFEEIAKYRAARRIWARAMRERYGAKNERSWWLRFHTQTAGCSLTAQQPEINIVRTAIQALAAVLGGTQSLHTNSMDEALALPSEKAVTIALRTQQIIAYESGVANTVDPLGGSYFVEALTDRMEREAQQIFDAINAQGGVIAAIRNGYFHREIADAAYRYQQEIDKGERIIVGVNAFQADEPLEIPILQMDPEGEKRHLERLNRVRRERDQDLVARRLAELRAAAQGSDNMMPAILNCVRAYCTLGEMCDVLREVFGVYQQDTVIV
>NC_011831.1|WP_157044921.1|3100332_3101052_+|heme-ABC-transporter-permease-CcmB
MIDIPAPPPSGIGVTLRAAWAIFRKDLACELRTRYAINTLLLFAISATTAVSLGVGFLGLRRTEEALLIQSALLWVALLFAALNGLSRSFVYEEEARTLAALRLSASPTAVFLGKFCFNLTLILVLALVTSLLFIVLLRVKVGSPLAFSAILATGGLALTSATTIIAAIIARASFKGALFAVLAFPLLVAPLIIAIQGTAQSLENVAVDVVFGPIRFLLAYVVVTFIASLILFPFVWEA
>NC_011831.1|WP_015941272.1|3099657_3100272_+|ABC-transporter-ATP-binding-protein
MQLHVLQLSAGYGGRTILRDLGFTLHRGEVLVVSGPNGSGKSTLLRILAGLQVPSGGLVYYEIGDRRFDPRDARHLIGWVAPDLALYRELSGLENLRFFAQVRGLTISDEALNELLTYVGLGQRGNDRLAAYSSGMTQRLRYAFALLHRPPVLLLDEPTVTLDERGAAVVERIIAAQRQRGLTVIATNDPRELRYADLLVKLGG
>NC_011831.1|WP_015941271.1|3098599_3099532_+|alpha/beta-hydrolase
MSIIVIDNQRVHYEVFGRGRPVVFLHGWLGSWRYWYTTMEIVSRYFRTYSFDFWGFGESRTSEMPTISGYSQQVIRFLDAMGIEKAALVGHSMGGMVAMKTAIEHPGRLMRVVTVGAPINGNSLSWMLKLVDRPFFAEFFARRPWLRRSLFRFFFGDSLDPEVDEVLEDSTKSTADTIRAAIHSMWRTDLTPMLGNLRVPALVVHGAHDDIVNPNQLQLFTHIPMAQVVRMEQSRHFPFVDEADRFHEILLAFLQQPDPLTLSAQRTTASQGPSQPTSPSSEPNNIVDSGEAMIPPPIAPPSRLRVPPGR
>NC_011831.1|WP_015941270.1|3097955_3098603_+|hypothetical-protein
MTALFVALGIAIITLLFILLWYVPHLLQQQAGRSAREAAQLRDMLLDMLNEQEAVMQRQAQLSAAMTNLQQQLSQLTAMSPSSSTGAVDTAVVRQLEDRITALQQQIQRWIEVRGRQQHQHDVSESEAWANLLGLLAAIQERIAQLSTERTLVAAGLQARTLLEELEHEMAHLRSISEDIATLQWRLRRSLHERETSVAQLRARAVGSSSTARPV
>NC_011831.1|WP_015941280.1|3108025_3108811_+|alpha/beta-fold-hydrolase
MTEPYLLPRGNHACLLIHGFVGDPGEMRSLADYLAEAGLTVLGVRLPGHTGHPEDLMAVSWRDWLAAVRQAFDWLTDCYATVSVIGFSLGGALAALLAAERPVHRLVMLATPYRLGGDWRIDVLGVARYVVPWFYLLAQADFSSPDLRASIWRRQPDLDLDDPAIQQMLRRSIKVSVAAIDELRLALAATRRVLPEVRTPVLIVHGRDDNTADPASASAIAARIGGVRCEIVYYPATGHQLLLTGPHRQMIFHRIGRFLSR
>NC_011831.1|WP_015941281.1|3108973_3111967_-|SpoIIE-family-protein-phosphatase
MSREHLLTWYGLIVGGVVWGWLLLLPTVPTVPALVVLFAVLAFAVDLLAFRTPPADVHSLAPLVLVSASLALGPIPAAWIAAVEGFVSGVTILLQTNRPRTLFSLLGRPLLRSGLRALGLLVGAWLATMSSGQPLTALPMSHVFGWTLLSFPFVTQLGRIVRELLQGGYSGLATWWRSAWPAILGAEIAPLPLAWLGAAIAHDLGMLHLILAGGALVASAAILRRSSLNLQRQRRSMRELARLNEVSRAIIRSELDVDALCELIYREASRIVDTSSFHLGLFNGHSYTLVVRVQDRVRLPRLTVDLSENSGLIGWIRETGRAILVEDFTREMDRLPARPRYQSERPPRSGIYVPLIAGETVIGSISVQSYEPSAFDANDLRLISLIADQAAVAIARARAFHEARQRANQLQAIREVSQQITAILNLDRLLPSIVQLIRERFGYHPVHIFTLSPDDERIYFRASTADGADLERLRALSLRIGQGLVGEAVQRGEPVLVGDVLNDHRAIRDTLQTRSELAVPLRVGTTVIGVLDVQSDEPDDFDEDDLFVIRTLADQIAIAIESANAYTAQQEEAWTLNALLQIAENIGRATTLSDLLATVVRLPSLLMGCPRCYVALWDREQGDFVVRAVYGLPTTARTGVLNQPTRSPFLWRLRERAAETDQSRLELLWQAQDNADQWPTLITAARSGTLVGLPISARNTLLGVLVLDYNDPFVSPSTRQQNLCTGAAAQIAGALESLLLAAEAAEAARLEQELRVAREIQQSLLPSRLPNVAGWQIEATWQSARLVGGDFYDFWSLPTGTEPPRELGFVIADVSDKGIPAAMFMTMARSLVRAAALDGSAPARAMERANRWLYRDSESGMFVTLFYARLDLITGQLCYTCAGHNPPLLYRAATGEIEELRTPGIALGVLPEVTLAEAETRLAPEDVLVCYTDGATETINELLVPFDVDGLRAVIKAYATGSAATIMQAILAAVARHSHGQPPFDDITLIVIKRAST
>NC_011831.1|WP_015941282.1|3111967_3112717_-|anti-sigma-factor-antagonist
MESITLTADLDALAKISAFITAAAERCGLDERATWQVQLAVDEAVTNVIQHAYDPDQPGDLTLSWQCHDHRFIVTVRDHGRQFDPNAVPVPDITSPLEERQVGGLGIYLITRLMDEVRFEFSPQGGNLLTMVKYLPHDQPDSSDEVQVIQVHDRIDALTAPRLTKLVSERISQGARQIVLDLSAVSFLSSSGLRALLLIRKELMTLGGELRLAALQPQVYEVFTITGFTQVFNIHPSVAEARTAFSQRR
>NC_011831.1|WP_015941283.1|3112761_3113112_-|STAS-domain-containing-protein
MELTHRRLNRVDLIEVIGRVDAATAPQLKQLIESIFNDGRYRIVLDLSRLEYISSPGLRVLIEARKKAREWKITDLEGGDVRIANLPPRIKEVFDLTGFSSLFEIYGDTVEAVGSF
>NC_011831.1|WP_015941284.1|3113263_3114325_+|hypothetical-protein
MPKWNDLSVAFNTLREIDVAAIRTEAERPLTIVCVGAVGVCQEIATRLERGTQRYGPIGPSPIQLASLATIISDELRSVDLIIIGLERTTRLSARELTTIDQLAALALPTVVVVWGTALPADAGPLHPRVAHARLLVVPDPMAPDVDEQLASAILDRLPAELHLAAARRLPGLRATVARQLINNVSFTNASYVLATALPAQIPIFNVPFAAADILVLTKNQAILVYRLALAYGAPPDIRERLREVLPVIGGAFIWRQLARSLVGLIPIWGVAPKVAIAYAGTYTTGMAAWRWFTEGEIIDQARLKELGREALALGRARAADLIAQARRTGAVQVDRWQRWGEALRSRFRRKEK
>NC_011831.1|WP_015941285.1|3114415_3115708_+|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MDHFVIEGGYRLSGSIRPAGNKNAALPLLAASLLTDKPVTLRNIPDIGDVRTKLALLNNLGVQIEQPAPNVVQLHAAHLAKHDPDVALARRIRTSPLLAGPLLFRRGYVTLPRPGGDAIGRRRLDTHLLALQALGVHVEVTPTSYILTTEGLRGADLFLDEMSVTGTEQAIIAASVAEGHTTIANAASEPHVQDLCHFLNQMGARISGIGTNLLEIEGVSRLRGADYTIGPDFMEVGSLIGLAAVTRSELRIVDARPREHRMTRIMFGRLGVTWREEGNDIIVPADQELVVRHDLHGAIPKIDSAPWPGFNPDLISTAIVIATQAQGTVLIHEKMFESRLFFVDRLIGMGARIVLCDPHRVVVVGPSQLYGEPDGLPSPDIRAGMALVTAALCAKGRSVIYNIGQIDRGYERIEERLAALGARIKRVRSS
>NC_011831.1|WP_015941286.1|3115711_3116377_-|SOS-response-associated-peptidase
MCGRYTLAVSPAKLAERFALPPISDLQPRYNIAPTQPVVVVREGNDGREGVYMRWGLIPSWAKDASVGAKLINARSETVLEKPSFRTAFRRRRCLIPASGFYEWQTTATGKRPFYFTLPDDDLMAFAGLWEQWLAPDGEVIESCTILTTTANEIVTPIHNRMPVIVPSEFTAFWLDPATDIPRLHAFCLTPPPVALHRYPVGKAVNQVRNDGPALIEPAAL
>NC_011831.1|WP_015941287.1|3116397_3116811_-|hypothetical-protein
MTQSNQSPNQPPDLGTALRELGQQLETAFRAAIDNEHTRQVQQELVSGFRNLGEQVQSALKTIAEDPRLQELAERGQQKLHELERSQAAQELQHALAQGIDQLNKQLAEFIRRIQTPAGGEPSTGATTPLDKDNDSF
>NC_011831.1|WP_157044871.1|3116941_3117697_-|hypothetical-protein
MLYCYQYDSRWRILVSEINNLSVVMWATDGTHVERAVTGAAAIAARYSTNYEIIIAAGPAATDAAARAANRPFVYATYHRQPRRPAYLLRDACTLIGGELVLAFDAATPPSASALERLLTAYDGQDIITGMRTPAPANLLHRTHTALLKQILVSDQADPLLPLALFRAELIDLLPGDGELAPPLAHVYAVARRRNYTTAQIALPAHSAPTRPSTIGDVASLAAQGPARSTRPALGTLIVVASLWLLLRRRR
>NC_011831.1|WP_015941289.1|3118088_3121238_+|S8-family-serine-peptidase
MIATPKRQLIALAVSLLLTMALVTPSTAQPPRPIPNLDALRLDEPVTIDQAPIKLSPSLVNVTGRHAVVIRLSENPTARIPQGAAQVAQLNRISQQQERVLARLRAIDPTLTELARLRVALNAVIVEVDGAALPALARDIEVVRINPVVDYERADQPPMETVPYIGATPEVQAAGYRGKDVRVAVLDSGIDYTHAAFGGPGTLEAYQAAYGTNPSDSRNKTLDGLFPTDRVKGGYDFVGEVWPNGPLMPDPDPIDCGVSGLSSGTCAGGHGTHVADIIGGQQGVAPEVDLFAVKVCSAVSSSCSGVAILQGLDWVADPNGDGITDDHMHIVNMSLGASYGQNYDDDSAIAVDNLQPLGILVVASAGNSSDRPYITGTPAGARTALSVAQTAVPSDSSYPITVLSTTVYGVAQPWAPIPSTAVSGILVYGASLGNALGCTAYPPGSLTGRILLVDRGTCAISIKGSNGAAAGAVAVIVANNVAGAVPPTFSFGGGSPTVPVLSITQTAGNALKARVNNSATVDFANPVSNAGSVVGTSSRGPTMGQMTYGNQIMYGQIIKPEIGAPGASISAVAGSGTGVEPFGGTSGAAPMVAGAAALLYNASNWSLSPWELKARLINTAETNIYNGPPVFVGPTLAPITRIGGGEVRINRAIAAQAGAWELSNGAATISFGLVEVTRNPTTLRRTIVVRNYGDTSLTYTITPTFRFANDAASGAITPGTSVTTITVPPRSRRTFTLTLRIDPTKLPAWVLNSGLNGGNGAALTAVEYDGYLVLDAPGTTNDLTMPWHVLPRAAGNVSAPASVRATTSSPAMARLTNTGANPVSVDPFTLIGSNNTVNASLGAGMQMPPMDLRYVGVRAFDGTGVCPANSPIIQFAVTTHQRITHSNYPVEIDLLFDTNRDGTPDYVGYTAEVGSFASDGRNAFFVGPVGGPYSAFFFTSHATNSTNTVVTLCGSQIGVTALGQQINVDAYTYDNYFTGFELSKIEGMSTVLGAPRFDIDIGSGVVPANGSLTTTVYRFNAPSDVTDSGILLQYSFAPAGREASAIIVR

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Crispr_ID: NC_011831_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_25

3245593-3245737

Orphan

Consensus_repeat	Method
GCGTGATCGGTGTTCATCCGTCCGATCGGTGCCATCCGTGGGCGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_25

>merge|NC_011831|25|3245593-3245737|CRISPRCasFinder
GCGTGATCGGTGTTCATCCGTCCGATCGGTGCCATCCGTGGGCGCTGTCCGCGAGGGGCCACAGATGAGACGGATGGGACGGATTGAGACGGATCGGCGCGTGATCGGTGTTCATCCGTCCGATCGGTGCCATCCGTGGGCGCTG

>NC_011831|25|21|3245593-3245737|CRISPRCasFinder
GCGTGATCGGTGTTCATCCGTCCGATCGGTGCCATCCGTGGGCGCTG	TCCGCGAGGGGCCACAGATGAGACGGATGGGACGGATTGAGACGGATCGGC
GCGTGATCGGTGTTCATCCGTCCGATCGGTGCCATCCGTGGGCGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_157044873.1\|3240988_3241702_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214668
NC_011831.1\|WP_157044875.1\|3248503_3249673_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|224271
NC_011831.1\|WP_015941371.1\|3241795_3242905_-\|o-succinylbenzoate-synthase	unknown	unknown	gnl\|CDD\|239433
NC_011831.1\|WP_015941376.1\|3246080_3248042_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|132912
NC_011831.1\|WP_015941384.1\|3254773_3255802_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NC_011831.1\|WP_015941368.1\|3238863_3239370_+\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|234606
NC_011831.1\|WP_015941380.1\|3250935_3251370_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|365823
NC_011831.1\|WP_015941372.1\|3242904_3243618_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|223619
NC_011831.1\|WP_015941365.1\|3236460_3237690_+\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	unknown	unknown	gnl\|CDD\|273015
NC_011831.1\|WP_015941373.1\|3243733_3244726_-\|glutaminyl-peptide-cyclotransferase	unknown	unknown	gnl\|CDD\|368283
NC_011831.1\|WP_015941367.1\|3238209_3238854_+\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	unknown	unknown	gnl\|CDD\|376420
NC_011831.1\|WP_015941381.1\|3251434_3251863_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941379.1\|3250308_3250833_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_085953517.1\|3239495_3240626_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NC_011831.1\|WP_015941382.1\|3252049_3253474_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NC_011831.1\|WP_015941378.1\|3249757_3250132_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|223706
NC_011831.1\|WP_015941385.1\|3255876_3256956_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NC_011831.1\|WP_157044924.1\|3253584_3254433_-\|ubiquinone-biosynthesis-protein-UbiA	unknown	unknown	gnl\|CDD\|260128
NC_011831.1\|WP_015941366.1\|3237617_3238229_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|236455
NC_011831.1\|WP_015941374.1\|3245005_3245470_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341361

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_157044873.1\|3240988_3241702_+\|hypothetical-protein	gnl\|CDD\|214668	smart00448, REC, cheY-homologous receiver domain. CheY regulates the clockwise rotation of E. coli flagellar motors. This domain contains a phosphoacceptor site that is phosphorylated by histidine kinase homologues.	5.19884e-05
NC_011831.1\|WP_157044875.1\|3248503_3249673_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	1.64053e-65
NC_011831.1\|WP_015941371.1\|3241795_3242905_-\|o-succinylbenzoate-synthase	gnl\|CDD\|239433	cd03317, NAAAR, N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids. NAAARs act on a broad range of N-acylamino acids rather than amino acids. Enantiopure amino acids are of industrial interest as chiral building blocks for antibiotics, herbicides, and drugs. NAAAR is a member of the enolase superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	0
NC_011831.1\|WP_015941376.1\|3246080_3248042_+\|PAS-domain-S-box-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.78188e-44
NC_011831.1\|WP_015941384.1\|3254773_3255802_+\|STAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	2.33451e-34
NC_011831.1\|WP_015941368.1\|3238863_3239370_+\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	2.12318e-79
NC_011831.1\|WP_015941380.1\|3250935_3251370_+\|cytochrome-c	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	6.84697e-11
NC_011831.1\|WP_015941372.1\|3242904_3243618_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	3.25307e-55
NC_011831.1\|WP_015941365.1\|3236460_3237690_+\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	gnl\|CDD\|273015	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD. This model describes the ribD protein as found in Escherichia coli. The N-terminal domain includes the conserved zinc-binding site region captured in the model dCMP_cyt_deam and shared by proteins such as cytosine deaminase, mammalian apolipoprotein B mRNA editing protein, blasticidin-S deaminase, and Bacillus subtilis competence protein comEB. The C-terminal domain is homologous to the full length of yeast HTP reductase, a protein required for riboflavin biosynthesis. A number of archaeal proteins believed related to riboflavin biosynthesis contain only this C-terminal domain and are not found as full-length matches to this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD].	4.0601e-117
NC_011831.1\|WP_015941373.1\|3243733_3244726_-\|glutaminyl-peptide-cyclotransferase	gnl\|CDD\|368283	pfam05096, Glu_cyclase_2, Glutamine cyclotransferase. This family of enzymes EC:2.3.2.5 catalyze the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.	2.02212e-111
NC_011831.1\|WP_015941367.1\|3238209_3238854_+\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	gnl\|CDD\|376420	pfam00926, DHBP_synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase. 3,4-Dihydroxy-2-butanone 4-phosphate is biosynthesized from ribulose 5-phosphate and serves as the biosynthetic precursor for the xylene ring of riboflavin. Sometimes found as a bifunctional enzyme with pfam00925.	1.63338e-122
NC_011831.1\|WP_015941382.1\|3252049_3253474_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.18074e-97
NC_011831.1\|WP_085953517.1\|3239495_3240626_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NC_011831.1\|WP_015941378.1\|3249757_3250132_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|223706	COG0633, Fdx, Ferredoxin [Energy production and conversion].	1.00481e-15
NC_011831.1\|WP_015941385.1\|3255876_3256956_+\|STAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.14522e-36
NC_011831.1\|WP_157044924.1\|3253584_3254433_-\|ubiquinone-biosynthesis-protein-UbiA	gnl\|CDD\|260128	cd13965, PT_UbiA_3, UbiA family of prenyltransferases (PTases), Unknown subgroup. Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.	1.80057e-69
NC_011831.1\|WP_015941366.1\|3237617_3238229_+\|riboflavin-synthase	gnl\|CDD\|236455	PRK09289, PRK09289, riboflavin synthase.	3.83704e-100
NC_011831.1\|WP_015941374.1\|3245005_3245470_+\|CBS-domain-containing-protein	gnl\|CDD\|341361	cd04584, CBS_pair_AcuB_like, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the ACT domain. The putative Acetoin Utilization Protein (Acub) from Vibrio Cholerae contains a CBS pair domain. The acetoin utilization protein plays a role in growth and sporulation on acetoin or butanediol for use as a carbon source. Acetoin is an important physiological metabolite excreted by many microorganisms. It is used as an external energy store by a number of fermentive bacteria. Acetoin is produced by the decarboxylation of alpha-acetolactate. Once superior carbon sources are exhausted, and the culture enters stationary phase, acetoin can be utilised in order to maintain the culture density. The conversion of acetoin into acetyl-CoA or 2,3-butanediol is catalysed by the acetoin dehydrogenase complex and acetoin reductase/2,3-butanediol dehydrogenase, respectively. Acetoin utilization proteins, acetylpolyamine amidohydrolases, and histone deacetylases are members of an ancient protein superfamily.This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria. Acetoin is a product of fermentative metabolism in many prokaryotic and eukaryotic microorganisms. They produce acetoin as an external carbon storage compound and then later reuse it as a carbon and energy source during their stationary phase and sporulation. In addition these CBS domains are associated with a downstream ACT (aspartate kinase/chorismate mutase/TyrA) domain, which is linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. Pairs of ACT domains bind specifically to a particular amino acid leading to regulation of the linked enzyme. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	4.31653e-48

>NC_011831.1|WP_015941374.1|3245005_3245470_+|CBS-domain-containing-protein
MMNKSKPVVPAEQEIRYWMRTPAITVNLAAPLSEALALMREHDIRRLPVVVDTGELRGIITQGDIRGADVMRIAGLDPVDIAQALRNVKVYEVMTENPIAVTPETGLREAALLMIENKIGGLPVIDEHKRVIGIITESDLFEALVQQLESHPHF
>NC_011831.1|WP_015941373.1|3243733_3244726_-|glutaminyl-peptide-cyclotransferase
MQWRRGLMLTILLGLIACNSLTQSRPTVTPTNVVVSLPLAIAPAPTATPTSITVSLPLVSAAETTPTLTTPQSIPSLPYRIVAVYPHDTRAWTQGLIVAGSGRLYEGTGDYANSSLREVDLVTGEVLRSVSLGDPTLYGEGIAQVGDRMFQLTWQNGRGFIYDAATFERTGTFTYPTPPATMPREGWGLTYDGTHLIMSDGTATLYFIDPEQTVATGQLTIVRTVTVTIGDRPRDRLNELEYIDGLIFANVWYSDQIVLINPTDGRVVGVLDMSGLLSPQERATADVLNGIAYDPASRQIFVTGKYWPRLFAITLDQQFYLPLISKSDGQ
>NC_011831.1|WP_015941372.1|3242904_3243618_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MTTSSGLQYVEVQPGYGEQPQPGAIVSVHYRGTLADGSVFDSSYERGEPISFPLGVGMVIPGWDEGIGMMRVGGKARLIIPPHLAYGELGYPPVIPPNATLTFDVELVEILPGPPEAPQDLPADRYTTNPSGLKFADLTVGDGTVAKAGHTVTVHYTGWLTDGSMFDSSLLRGEPFIFPLGAGRVIRGWDEGVAGMRVGGRRQLIIPAALAYGNRGAGDVIPPGATLIFEVELLEVV
>NC_011831.1|WP_015941371.1|3241795_3242905_-|o-succinylbenzoate-synthase
MRIEAIELRRIRLPYRSPFETSGWREEANHSVIVTLHSEGAVGWGEAPVGAGPWYNEETQATAWVMMREILAPLLLGHDLSCPEEVDTVFARVRGNRMARAGLEFAAWDLFGRASGQSLSAMLGGNRQRVEVGVSVGVQPSIEALLEVVEGYVSAGYQRVKLKIKPGWDVEPTRAVRERWPDLRLQVDANSIYTLDQAAQLAKLDEFDLLLIEQPLAHDDIIDHAKLQRQLRTPICLDESIVSPAHARWAIELRACGVINIKPSRVGGFHAARQIHDLAQAAGIPVWCGGMLETGIGRAANVGLASLPNFSLPGDISANDRYFHQDIVTNPFTLNPDSTLTVPTGPGSGAEVDLERLQAVTIDYVMLRS
>NC_011831.1|WP_157044873.1|3240988_3241702_+|hypothetical-protein
MSSTGVSAMLKGIILLVEHEPDRRDRLTRLLNRLDWAVVAVSDVRSAYDDVNRMAFDYLIIDRITASLRDYALIASRIPRIFSSHWLDNHHDQLVNLIPIRSAEWFSYLWQRSTKPAHISPDIATKPSSPPQAPVVDPSSWPTLMVSAAVARALFNNREIPLNQCELEVIHYLSQLPSQMASFESLADLIYKRKMQYCEARELVKARLARLRRKLPGVIQPVRGYGFLLRARLLSEQ
>NC_011831.1|WP_085953517.1|3239495_3240626_+|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MTMDAVLVLEDGRVFPGRSFGAPGERIGEVVFHTGMTGYQEILTDPSYCGQLVTMTAPHIGNTGVNDFDPESIQPQVAGFIVRNYSEHYSSWRARGSLSQLLRDYGIVAISEVDTRALTRHIRTAGAMRGIISTTGESIETLLAKCRAAPPMEGQDLTQVVTCPEPYHWTTNSEPFTPPYPNGPAKELTYHVVAYDFGIKRTILRRLVDHGCRVTVVPATTSPAEALALRPDGIFFSNGPGDPAAATYAVATLRALLGKLPIFGICLGHQLMGLALGGRTYKLPFGHHGANHPVRYLPTGRVEITSQNHGFAVDLDSLPAGVELTHINLNDQTLEGFSYPELHCFSVQYHPEAGPGPHDATYLFAQFTAMMAAAKR
>NC_011831.1|WP_015941368.1|3238863_3239370_+|6,7-dimethyl-8-ribityllumazine-synthase
MGQTFEGQLVGTGLVCGIVISRFNDTIGRELLRGAIDTLTRHGVAADDIDIAWVPGAFEIPLVAKRMAERKRATDDRPYYDAIICLGVVIRGSTSHFDYVAGQAANGIASSALVTGVPIIFGVLTTDTIEQAIERAGTKAGNRGSDAALAAIEMATLLRSFAWNRQHR
>NC_011831.1|WP_015941367.1|3238209_3238854_+|3,4-dihydroxy-2-butanone-4-phosphate-synthase
MPFASVETAIADFRAGKFVIIVDAADRENEGDLAMAAEFVTPAAITFMAREGCGLICVAMTGERLDELQLPLMVPPTDNTNHFGTAFTVSVEARYGVTTGISAFDRATTIRTLIDPATRPEDLVRPGHVFPLRARDGGVLVRPGQTEASLDLARLAGLYPAAVICEIMNPDGTMARLPDLERFAARHGLTLLSIADLIAYRRRIEQVEPMIVTA
>NC_011831.1|WP_015941366.1|3237617_3238229_+|riboflavin-synthase
MFTGIIEEIGTVESLTEIDGGWSLTVQATTVLQGTEQGHSIAVNGACLTVTALTNSTFTVGLSPETLRRTNLGDLRIGDGVNLERSLAVNGRIGGHFVQGHVDGTGVITAFHPEGDSLWVTVATTPDLLRYIVPKGYIAVDGTSLTVVEVLPDVFTFMLVAYTQQHITLPRKPVGSRVNLEVDVLAKYVEKFIGEMPYAVRQR
>NC_011831.1|WP_015941365.1|3236460_3237690_+|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD
MCQHPDPETYMRRALVLAQQAAGRTSPNPMVGAVIVKDGRIVGEGYHRRAGEPHAEVEALRVAGEAARGATMYVTLEPCAHVGRTPPCTDAIIAAGITEVYYAIADPNPLVSGKGHAQLAAAGIRVQCGVCEAEAFELNRPFFKHITTGRPFVTAKFAMSLDGKIATVIGQSRWISNAAARRRVHHLRNRTDAVLVGAGTVIADDPSLTTRLPDLSPDSIRHPLRIVADSRGRVPLSAKVFDPDLPGQTVVATTELIPADHRRALVERGVDVWLLPASDDGRVRLSALFDELGRRGMLSVLVEGGSELLGACFCERLIDRVWVFMAPLIIGGQHAPGPVGGSGYALLSQAARLGRMHVELIPADDDESAAPDIWIQADVSYPEEEVCSPVLSRKLVQSNHLPKSMADGR
>NC_011831.1|WP_015941376.1|3246080_3248042_+|PAS-domain-S-box-protein
MHLDPSSMSNNSLLSERLLATIERTSLLVTETDAQGVITFVNPAAQRFFGYTPAECIGKTVLELTHPADRDRLQQTIIECVRDGRHLAEIENRILHRDGSVFHFLWSVAIHYSDQGTIIGFTSIGQDISALHQLRSELYEKREMLYTVIDHLPLGVFWKDKESRFLGCNRRVLEDSGLSSFKDIIGKTDFELPWRRQATYYQYSDRVVMASGPQTNIEETLVRGDGRQIWIRTTKLPLRRQGEVIGVLSFYEDITEQRQQNEYLRTLRLLVENAPDGIGIVDPDLRLTYTNQAFIELLGYEQLVGIGWPDLVHPDDREHLVHMVRRATTGEAAHGTLRYLRRDGSFLTVQVAIPVLRDRTNKLMGFGVINHDLTEQLEAMARLQASEQQQRALLQALPDLMFLLSRDGVFLQYKADGSDELAVRPEVFLHRRFDEVLPPVLAELTRHHLEIVNQTGQPQRYEYQLEIGGELHDYEARMHPSGDNVLVLVRDITEQRRAERERQTLILQEQIIQAQLVVLRELSTPLLPIANGVVVMPLIGTIDSSRAQQVMETLLDGVNRYQATVAIIDITGVKVVDTQVAGALIRTAQAASLLGAQVVLSGINPEIAQTLVQLSIDLAGIVTKATLQDGIAYALSRQQLRTRPVPTALKMVR
>NC_011831.1|WP_157044875.1|3248503_3249673_+|tetratricopeptide-repeat-protein
MSVEAQLFDLHEHSLVAWTARRNVIVPDLLQRRYLVRYLWVWSAGCATGEEPYSLVIALREALPTDPPWQINILATDINRRFLERAREAVYGNWSFRETPPAVRDRYFIPENGRWRLRDEVKHDVIFAQLNLVEPTYPSPQLGIIAFDLIFCRNVLIYFDDRTMQQIVQRLYDALTPGGWLVVGHAETHIERFRQFETYNAPGTVLYRKPLQAPPFVMPSTNLPALPLPPPPSPPVLAVQPPTPMPAPAPTSAPTPSPEERLRQARAAADHGDWDAAQAYVQQVLEINPLYAPAYYLLAQIAEHHGRLEEALADYRRSLYLDSHFVMGLIGMAGVAMRLNQMDTVRRSLRQAQQLLEQCANDTVVDPLSGGTAGDLRSYIALLWQQVNR
>NC_011831.1|WP_015941378.1|3249757_3250132_+|(2Fe-2S)-binding-protein
MPTVTVGERAITVEPGTRLVLAIEQAGIAIGHRCGGYARCTTCRVKFAEGEPDVMTAPEYAKLKERGLLGEYRLACQIVCDHDMVIAEVPFTLGSQGWTDTGPAPEPTVTPDPVTHPRAELESA
>NC_011831.1|WP_015941379.1|3250308_3250833_+|hypothetical-protein
MVLSHSFVLYPRLARLLRSFILLTGSILRATISAVKSGTIFCHSRFSRQVNSCGWWIVRLLTILVALELGVLSPLSCVLHCLIHDWLRQSVTQNFFFCGVYPDDESVQPMPDTPAPLAGIQPRAVYEALPPLLLAILFVVPLITVLPGIRFLIPATYSLPPPTPPPRPRSLCFA
>NC_011831.1|WP_015941380.1|3250935_3251370_+|cytochrome-c
MNRTIAWAFTLLLIGLLTACGGNQQTSSSAPVTELPAALADTSLSSKGDPKRGKELFGPCAACHTTSKEVLVGPGLAGLFSASGPVLPKGVDYNGMLPNGKERSEANIAEWIRTGGTGRIGYMPSHNLTDQEMADLLAYLRTLK
>NC_011831.1|WP_015941381.1|3251434_3251863_+|hypothetical-protein
MRSLLFGCLCCLTSLVVSLGLGHIWPSLRESVATLTRPYREPTFIIRELLDAVERDPQTAIATFAGHMQQPASLHLLLAEWQHAHHPPSFVLGPYRRPDRLIFGMELVIPLRFACHRGQSRLDIVVGFTPLGWQVYEIRPPQ
>NC_011831.1|WP_015941382.1|3252049_3253474_+|glutamine-synthetase
MSELRDFLEIPYEQLEELNLSVKRQRLARVSPDVMREERMRYLTDERRIKAVTVCFTDLEGRLHMLDYDKKFLLSSADNLTFDGSSVRGFSVQAESDLRLAIDWSAFYWLPADIFGPGKVLVFGYVLNQDGTPYEADMRGRLHQYTQELYQREGLTCNIATEIEGFLFQGRNAEQRFRETGEFVMVSTGGYYHSLPGDPLRQFIDMAAEAQRAMGFENEKDHPEVAPSQFEMNYSYTEATIAADQILLYKLICRQVAGKLDMTASFLPKPITGVNGNGMHTNISLSRQGVNLFYDANGPERLSELAWSFIDRILNSAQDLCLILNSSVNAYRRLDPHFEAPNQIKASPTDRGSMIRIPIGNARSARIEVRSIAPDANPYLAIYALLRTGLEGPLPTTDVRSSTATLPDNIYDAIANFRQSAFMAQIMGESVHARFADLKTTVADRCPRRLGTLIKRAEVQFHHEVTNQYLWSRF
>NC_011831.1|WP_157044924.1|3253584_3254433_-|ubiquinone-biosynthesis-protein-UbiA
MYEIHLYWRFTRYDISATVVPGLAFALAAWHQGQPNWAALPSLIGWGVVYFWLYSVCFCISNQLAGESEDRLNKPDRPLISGLVSRRGAMIRWIVFMGLFALVGWHLGVLEWTLLWQITLTLHNFGHVARHYWGKNLSMVFGAIAQLAAAWQMVRPITPAAWIWLLVPSITLLSNASLQDLRDIDGDRMNGRRTMPIVFGETFTRIFVAIAFGCVAVLTHFALFVPAGLNAGTLLLDGIQTGICLIIAGRVLFLRTPAADHGSYMMYTYWYSFLLAAAIVVL
>NC_011831.1|WP_015941384.1|3254773_3255802_+|STAS-domain-containing-protein
MSTSQVFLDRFYHRIVRNIALGTLIIAAVAILLTLIVYVLTTNLVIGLVVVIALVTGLGCLATLWLLTHERPLWQAILPFSLAVIGNELVIATWLPELRLAVAPFLAVVILLAGLNRQRAFTIGVMITCVLLIVAIVILGPTTEQQSIPLELLRFLQASSLAALMIAIWAFLDQIIVAQIQALDLADQRAAEAEAARQVAETARYEIAQRAEEQQRLLELVAALELPVLKIDDQVLLAPLVGNLDSRRAEQLRRRILDLVAEQRAHTVIIDITGITIIDTAVAKALIDTAAAIRLLGARTIISGIRPAVAQTLVHLNSGLTDITTAPNPQMALMLSRRFATV
>NC_011831.1|WP_015941385.1|3255876_3256956_+|STAS-domain-containing-protein
MIRHLASLIAVQARTPDEERRGRILVTLSLGVVAILLTIGIVLTLFQPTLSRFINLGLATLVFATAAWLGRKGFVTAGSYVLIVVSGIGALSGMFLNPNSPFNIFYLPLSVLLASVLLRPHQIWVVLGLALAALGGVVISLPSSQRAMIALDLAAAHVTVLLTVSALITFIGARSLATALDEARGLRQQAEEANRRLAELNADLERRVAERTAALEQLTVEQQATMAQLQAALAAQQRLNQQIINLSAPMIPINDETLVTPIIGQLDQTRIQQLLQAALTTIEQTNARVLVIDVTGVAIIDSHAAAGLLQVAQAARLMGAVTVLAGIRPEVAQTLVSLGADLSAIRTAATLQAALAMRS

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Crispr_ID: NC_011831_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_26

3310090-3310197

Orphan

Consensus_repeat	Method
ACGCAAAGGACGTAACGCAAAGGCGCAAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_26

>merge|NC_011831|26|3310090-3310197|CRISPRCasFinder
ACGCAAAGGACGTAACGCAAAGGCGCAAAGGGCGCTCACGCAAAGGCGCAAAGGGCGCCGAGGGGGCCAAGCGGGTAACGCAAAGGACGTAACGCAAAGGCGCAAAGG

>NC_011831|26|22|3310090-3310197|CRISPRCasFinder
ACGCAAAGGACGTAACGCAAAGGCGCAAAGG	GCGCTCACGCAAAGGCGCAAAGGGCGCCGAGGGGGCCAAGCGGGTA
ACGCAAAGGACGTAACGCAAAGGCGCAAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_041470611.1\|3301169_3303371_-\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319845
NC_011831.1\|WP_015941434.1\|3323785_3324496_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_011831.1\|WP_015941424.1\|3303582_3305394_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223510
NC_011831.1\|WP_015941419.1\|3295764_3297606_-\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NC_011831.1\|WP_015941421.1\|3298366_3299497_-\|heat-inducible-transcription-repressor-HrcA	unknown	unknown	gnl\|CDD\|273017
NC_011831.1\|WP_015941437.1\|3328509_3334980_-\|pullulanase-type-alpha-1,6-glucosidase	unknown	unknown	gnl\|CDD\|273974
NC_011831.1\|WP_015941428.1\|3310272_3310800_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|273179
NC_011831.1\|WP_041471061.1\|3299745_3301095_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349930
NC_011831.1\|WP_085953550.1\|3297729_3298308_-\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|366423
NC_011831.1\|WP_015941432.1\|3318145_3321829_-\|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl\|CDD\|234749
NC_011831.1\|WP_015941431.1\|3313330_3317833_-\|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl\|CDD\|234794
NC_011831.1\|WP_015941427.1\|3307832_3310076_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|274152
NC_011831.1\|WP_157044878.1\|3306511_3307693_-\|DUF4338-domain-containing-protein	unknown	unknown	gnl\|CDD\|372975
NC_011831.1\|WP_015941429.1\|3310937_3311216_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366431
NC_011831.1\|WP_015941418.1\|3294601_3295723_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|274090
NC_011831.1\|WP_015941433.1\|3322181_3323591_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|182539
NC_011831.1\|WP_015941435.1\|3324592_3325105_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941436.1\|3325220_3328205_-\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|180426
NC_011831.1\|WP_015941425.1\|3305397_3306528_-\|DNA-double-strand-break-repair-nuclease-NurA	unknown	unknown	gnl\|CDD\|214920
NC_011831.1\|WP_015941430.1\|3311289_3313251_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224720

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_041470611.1\|3301169_3303371_-\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319845	cd07545, P-type_ATPase_Cd-like, P-type heavy metal-transporting ATPase, similar to Staphylococcus aureus plasmid pI258 CadA, a cadmium-efflux ATPase. CadA from gram-positive Staphylococcus aureus plasmid pI258 is required for full Cd(2+) and Zn(2+) resistance. This subfamily also includes CadA, from the gram-negative bacilli, Stenotrophomonas maltophilia D457R, which is a cadmium efflux pump acquired as part of a cluster of antibiotic and heavy metal resistance genes from gram-positive bacteria. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_011831.1\|WP_015941434.1\|3323785_3324496_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.53023e-87
NC_011831.1\|WP_015941424.1\|3303582_3305394_-\|ATP-binding-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	1.2196e-09
NC_011831.1\|WP_015941419.1\|3295764_3297606_-\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NC_011831.1\|WP_015941421.1\|3298366_3299497_-\|heat-inducible-transcription-repressor-HrcA	gnl\|CDD\|273017	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA. HrcA represses the class I heat shock operons groE and dnaK; overproduction prevents induction of these operons by heat shock while deletion allows constitutive expression even at low temperatures. In Bacillus subtilis, hrcA is the first gene of the dnaK operon and so is itself a heat shock gene. [Regulatory functions, DNA interactions].	1.32794e-135
NC_011831.1\|WP_015941437.1\|3328509_3334980_-\|pullulanase-type-alpha-1,6-glucosidase	gnl\|CDD\|273974	TIGR02103, pullulanase-like_protein_starch, alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NC_011831.1\|WP_015941428.1\|3310272_3310800_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|273179	TIGR00621, Single-stranded_DNA-binding_protein, single stranded DNA-binding protein (ssb). All proteins in this family for which functions are known are single-stranded DNA binding proteins that function in many processes including transcription, repair, replication and recombination. Members encoded between genes for ribosomal proteins S6 and S18 should be annotated as primosomal protein N (PriB). Forms in gamma-protoeobacteria are much shorter and poorly recognized by this model. Additional members of this family include phage proteins. Eukaryotic members are organellar proteins. [DNA metabolism, DNA replication, recombination, and repair].	2.20037e-53
NC_011831.1\|WP_041471061.1\|3299745_3301095_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349930	cd05681, M20_dipept_Sso-CP2, uncharacterized M20 dipeptidase. Peptidase M20 family, unknown dipeptidase-like subfamily (inferred by homology to be dipeptidases). M20 dipeptidases include a large variety of bacterial enzymes including cytosolic nonspecific dipeptidase (CNDP), Xaa-methyl-His dipeptidase (anserinase),and canosinase. These dipeptidases have been shown to act on a wide range of dipeptides, but not larger peptides. For example, anserinase mainly catalyzes the hydrolysis of N-alpha-acetylhistidine while carnosinase degrades beta-alanyl-L-histidine. This family includes Sso-CP2 from Sulfolobus solfataricus.	0
NC_011831.1\|WP_085953550.1\|3297729_3298308_-\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|366423	pfam01025, GrpE, GrpE.	4.82838e-58
NC_011831.1\|WP_015941432.1\|3318145_3321829_-\|DNA-directed-RNA-polymerase-subunit-beta	gnl\|CDD\|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NC_011831.1\|WP_015941431.1\|3313330_3317833_-\|DNA-directed-RNA-polymerase-subunit-beta'	gnl\|CDD\|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NC_011831.1\|WP_015941427.1\|3307832_3310076_+\|6-phosphofructokinase	gnl\|CDD\|274152	TIGR02478, ATP-dependent_6-phosphofructokinase, 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).	0
NC_011831.1\|WP_157044878.1\|3306511_3307693_-\|DUF4338-domain-containing-protein	gnl\|CDD\|372975	pfam14236, DUF4338, Domain of unknown function (DUF4338). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 206 and 475 amino acids in length.	8.36876e-45
NC_011831.1\|WP_015941429.1\|3310937_3311216_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|366431	pfam01037, AsnC_trans_reg, Lrp/AsnC ligand binding domain. The l-leucine-responsive regulatory protein (Lrp/AsnC) family is a family of similar bacterial transcription regulatory proteins. The family is named after two E. coli proteins involved in regulating amino acid metabolism. This entry corresponds to the usually C-terminal regulatory ligand binding domain. Structurally this domain has a dimeric alpha/beta barrel fold.	3.43496e-14
NC_011831.1\|WP_015941418.1\|3294601_3295723_-\|molecular-chaperone-DnaJ	gnl\|CDD\|274090	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.	0
NC_011831.1\|WP_015941433.1\|3322181_3323591_-\|HAMP-domain-containing-protein	gnl\|CDD\|182539	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS.	2.35479e-82
NC_011831.1\|WP_015941436.1\|3325220_3328205_-\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|180426	PRK06148, PRK06148, hypothetical protein; Provisional.	0
NC_011831.1\|WP_015941425.1\|3305397_3306528_-\|DNA-double-strand-break-repair-nuclease-NurA	gnl\|CDD\|214920	smart00933, NurA, NurA nuclease. This family includes NurA a nuclease exhibiting both single-stranded endonuclease activity and 5'-3' exonuclease activity on single-stranded and double-stranded DNA from the hyperthermophilic archaeon Sulfolobus acidocaldarius.	1.42608e-14
NC_011831.1\|WP_015941430.1\|3311289_3313251_-\|hypothetical-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	2.51577e-06

>NC_011831.1|WP_015941427.1|3307832_3310076_+|6-phosphofructokinase
MTNTPIRIGVLTSGGDAPGMNAAVRAVVRTGISHGCEVYAIYEGYKGLIQGGTLIRRMDWSSVGGIIQRGGTIIGTARSAEFRTREGRRQAAANLVTLGIDRLVIIGGDGSLTGADLFRREWPELLAELVAAGTISEAQAAAHPHLRIAGIVGSIDNDFCGTDMTIGADTALHRITEAIDAISSTAASHQRTFVIEVMGRNCGYLALMGAIAGGADWAFIPEMPPQMDDWEQHMCDVLRIGREHGRRDSIVVVAEGACDRHGKPITAHYVKKVLEERLGEDTRVTILGHVQRGGAPSAFDRWMSSLLGATAVEELLNADADAEPKLIGLRENRVVRLPLMTCVSDTRQVAEAIAQHDYERAIAMRGNSFVEAYRTLGTLIQSQPSPPDRLRRGHRFAVMHSGGPAPGMNTAVRAAVRIGIDRGHTMLGVRNGFQGLIDGDIFEMDWMSVSGWATMGGAELGTNRKIPQGSELYQIARNIERFGIDGILMIGGWAGYQAAYKLYSERHIFPAFNIPIICLPATIDNNLPGSELSLGADTALNSIVHAVDRIKQSAVASRRCFIVEVMGRDCGYLALMSGLATGAERVYLPEEGINLRTLQSDLDEMMEWFRRGKRLSLIIRNEKANPIYTTSFICSLFEEEGGKLFEVRQAILGHLQQGGDPSPFDRIQATRLAVRCIEFLIEHADRQEPVGAFIGYRGGKVQVHPIEDMPRLMDPVHARPREQWWLALRQMTRLLTTPPVFHQVEQK
>NC_011831.1|WP_157044878.1|3306511_3307693_-|DUF4338-domain-containing-protein
MKSHSQDDRATLMNASELKCLVIQRLQACGFELSHTGALSLQTTEKEAIRLLHQPATNVERAAHQAWLHRHLDRYLPFFADGDEVDPRHIQPELVEVRTKHHANLFRIARLLWSIPLSKGYGRRLRFLVVDQANQKLIGILALQSPPLSFPSRDRLFRYPPNKKTELVNQTMDIQTLGAVPPYDRLLGGKLIAYAAAANEIRAAYRRKYEQRATEMEQRILPPHLVALTTTSAFGRSSIYNRLRYHHLSIAESIGFTEGYGSFHLLELYPLFRAFLEEQGISTRGGFGVGPRRTWQTMVRALERLGLSASLLQHGVKREVFLFRLIDNLEDYLEGRTTEPQYRDLPFATLVAWWRSRWLLPRAERVQWRSWRKEDVRNRLLLAPSEVVYDRVA
>NC_011831.1|WP_015941425.1|3305397_3306528_-|DNA-double-strand-break-repair-nuclease-NurA
MTELPDCVFGELPAALVDELLNRSADLSQHLLSDFQHLRQQYEQWRHLLTEAKLLGREADLAYPTIPTTCGIDGAYAVERLLASDLVAAAAVAVEGLTPPSETRYWPEPRHRAWIEAEVHDSDTGTILRALMIGFEMQLAHEAPHQVVLLDGSLTTPLIYFNQALNKCRETGHLKTTQYFLERIPAFLTTYHSILQAQRSDRCWISIPKYTTRREIGHHLNWSSAHDDRSVLSFVLAAGEYTQPVSLQQPDEPWHLNVEPSLRPIATEIIQALSTIQVVYYRPFQWLPALRLEMAQAIASNRHRLAEVLHGIRHQCGTPAVLEPYPLYMADRMVKHLAVAIPTLRQIAGQQMAESYQGDINDVFMGLHGYRTESGV
>NC_011831.1|WP_015941424.1|3303582_3305394_-|ATP-binding-protein
MYQHLDQLVDQAERIGVIGSPSSTSELALDILAGAIHKKLIGELAIFRYMQDGIPHYALGQITEIKLRNVWHEDPTMRSLIRQRGRIDTVSERQDTHLGEMTISAVFAAKSGTYRPDMLGTVPPTGTPIYLVTDAILHELLSLFKQQLFYLGHVYGSTPLLPCWFKHFDSGPDGAGEAYHLGIFGKTGSGKSVLAKMILLAYARHREMGLLVIDPQGEFAKDMRHNTGTGSFRLPMQAILQKLGRNVQVISIQNLVLDRWDIFEQILGNSGFFQRLGIKASQNQKQAAEVVREHLEGKKKLTDLHLRETFNSVWETLQKEQNLTRIYGTKDKREQVLTQMRNLNPDTIYQQAWLPITQLFNQRRSDAQTVDHLLENLFTGQGQRAVVVIDLSEERSIASKPTSKNQLTLLEVDEADNTASPSRLVWNDTIQALVMRRLLEGIRHAAEHSYRQNRSLNTLVLIDEAHRIAPREEPSNEEQQAVRTFLIDAVRTTRKYGVGWMFISQTLSSLHREIIEQLRIFFFGFGLSMGTEFRALSELVGGRGNALDLYQLFRDPHSAIDSDSREYSFMTIGPVSPLSFAGTPLFLNVFNNVTDFLKQNNLQ
>NC_011831.1|WP_041470611.1|3301169_3303371_-|cadmium-translocating-P-type-ATPase
MHNQQFTIKGMDCPDCARTVERGVARLAGVKTCHLNFTTEQLHVTGDVDPETVIARVRELGYEAQPTTSAVSEAPPSFLRFMLSIRETKRALIGFLLVLPGIVLHEILGWEAWWIDALALGGLALVGPSIAHHAWRVLRTNRELSIDALMTIAAIGAIVIGAYVEAGLVMVLYAIGEALEGYTANHARHTIRSLLELTPPTATLITPDGEQVTAVENLHPGDRIIVRPGERVPVDGTITAGSSFVNQAPITGESRLVERSVGDEVFAGTMNGEGSIEVIVTRPAAESTVARMIHLVQEAQERRAPIQRFVDRFARIYTPLVVLLAAIVALVPPLFFGQPFWNPDPNTFGWFYRGLALLVVACPCALVISTPVSIVSALSTAARHGVLIKGGAYLEALARVQTIAIDKTGTLTTGKPAVVTLRTVGCIKPEAPLGHCTACNELLALAGAVERRSEHPLAYAIVNAANTCGLTLPSAAEVRTLVGQGVRGIVNGTEVFIGSHRTFDQVMTHDEWHCLAAHRDSQLGRTPVMVGVDGQYRGTITVADTIRAESRSAIARLRDQGLRIVMLTGDETATAERIAAELGVDDVRAGLLPADKAQTVQALRQTNGVVAMVGDGINDAPALATADVGIAISARAGGTTQAMETADITLLSGDLHQLPFAIALSRQTLRTIATNVAFSIGIKLFFIGLVLAGLGTMWMAVLADVGASLLVTLNGMRLLRFRAKLPVAYDQAA
>NC_011831.1|WP_041471061.1|3299745_3301095_+|M20/M25/M40-family-metallo-hydrolase
MERFAAYIAEHQARLRAELAEIVRLPSVSAQNRGITETATFVEQRLRRLGAETRLLSADGGNPLVYATIGNGSRTLLIYDHYDVQPAEPLELWHTPPFDLTERDGKLYGRGVADNKGNLMLRIQAVEAWLATEGALPIRIVFVVEGEEEVSSKTLPAVCRTYADLLRADGCLWETGGVDLSERPVVTCGAKGIQYVELVARGASYDLHSSYATFVPNPAWRLTWALNTLKGPDGRIRIPGFYDRVRPPSAADLAALATIPAGDDEALLADFGLTAFLDNVRGTERLRRHLFEPTCTICGLVSGYTGEGSKTVLPSEARAKIDFRLVPDMDPAEVLQQLRRHLDAEGFNDIEIIDLGGEHPARSPLDATIVQAAVASARDVYGCEPILYPTMAGTGPMYPLCTALGTPVASGAGCGYHGSRVHSPNENIRLADYERAMRWMGSLIKHFAS
>NC_011831.1|WP_015941421.1|3298366_3299497_-|heat-inducible-transcription-repressor-HrcA
MSGPLTERRQTILKLVIQEFVDTATPVASETLVRKYRLPVSPATVRNDMAALEELGFLTHPHTSGGRIPTDTGYRFFVENLMERTSLSPAEQRMIRHQFYQVRGELDQWVQLACAVLARTAHNASVATAPRAEQLRFKSLELISIHETMALAVIVFHGGIVKQQTLPVEPWRTPEDLRRAAGLVSDLLADATLTRVEELATAATFNGIPLSDFERGLVDLVVRAMIAFEEQAQEQIYSDGLLEMLSQPEFSPASGRDDAERVIERMRRTLEILKSGRGLGPLIPQALASGGVQVIIGGEHGEDTMRDYSVILARYGVEGVIAGVLGVIGPTRMAYPRSISTVRYIASLMNNLLAELYNVQARPSEGESEYKDEQHA
>NC_011831.1|WP_085953550.1|3297729_3298308_-|nucleotide-exchange-factor-GrpE
MNVKQTTAAPDESATTGEQAIATDAAPTTTDTPADPAAVIADLQQRLAQAEAQAAEYKDQWMRAVADYRNFKRRTETERAELIRNAGTAIILKLLPVLDDFERAIANVPPEIAETPWWQGTQLIAHKLRTMLESEGVKPIEALGQDFDPNLHEAVIYEDAEGQEGKVIAELQRGYLLHDRVIRPSMVKVGRG
>NC_011831.1|WP_015941419.1|3295764_3297606_-|molecular-chaperone-DnaK
MPKVIGIDLGTTNSVVAVVEGGDVVVIPNAEGSRLTPSVVAITKSGERVVGQVARRQAITNPENTIFSVKRFIGRKFNEPSVQRDKELVPYQLTAAPNGDVRVLMAGREYAPPEISAMVLQKLKADAEAYLGEPVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIVNEPTASALAYGLDKKGKDELVVVYDMGGGTFDVSILELSDGVVEVKATSGDTHLGGDDFDQRIIDWLADEFQRENGIDLRTDRVALQRLKEAAEKAKMELSTLMQTEISLPFITADSSGPKHLSVTLTRARLEQLCADLIERSMGPVRQALRDAGLQPHQIDEIILVGGQTRMPAIQAAVRNFFGKEPNRSVNPDEVVAIGAAIQAGVLGGEVKDVLLLDVTPLTLGIETLGGVMTPIIERNTTIPTRKSQIFSTASDNQSSVEIHVLQGERAEARYNKSLGRFELSGIPPAPRGVPQIEVTFDIDANGIVSVSARDKATGKEQRITITASSGLSPEEIEQMVRDAELHAEEDRRRRELVAARNQADSTLYAAEKALREAGENLDPTVRSTIEEKMIALRSVLADDDEQAIRNRIAELAVALQHITTTSTNNAAGTVTGEQVEK
>NC_011831.1|WP_015941418.1|3294601_3295723_-|molecular-chaperone-DnaJ
MTTGAKRDYYEVLGVSRSATPDEIKKAFRRLARQYHPDVNKSPDAEAKFKEINEAYEVLSDEQKRAMYDRFGHNPPGFGGMGADPFGGVDPFSSIFDAFFGAAGVGRSTRGPMRGADLRYTLRLTFEEAVFGTEKEIEFRRLETCPACRGSGAEPGTEPTRCPRCGGTGEIRQRAPIFNMVTVTTCDVCGGTGYVIPIPCRECRGEGRVRQTRRITVRVPAGVDGSQQIRISGEGEAGPRGGPPGNLYVALDIQPHPIFEREGNDIILNLTINVAQAALGGEVSVPTLEGTERLRLPPGTQHGQTFRLHGKGVPYLRQQGRGDQIVVIRVEIPTRLTDQQRRLFQELAQTFSSHDHDHGDKGLFGHIKDALGL
>NC_011831.1|WP_015941428.1|3310272_3310800_-|single-stranded-DNA-binding-protein
MAKDLNKVQLTGHLGADPEMRYTAQGSPVTTFRVASNRTWRDKDGHSHEETEWFRIVAWDKLGEICNQYLTKGTRVYIEGRLQTRKWVDRDGQERYTTEVIAQDMIILSSKGERGPVPDAEPVYDEPVDEPVRRTPPPSPPNPRPANNSPSTRAPVNRAPSRNQPQPLDDEDIPF
>NC_011831.1|WP_015941429.1|3310937_3311216_-|Lrp/AsnC-family-transcriptional-regulator
MVTAFVFITCEPQRISDLAQEIAELPNVAEVYSVTGDYDIIAVLRVNAYESLDDTVPGGIARLPGVRHTTTVLAFRRYSRRDLEVGFDIGLS
>NC_011831.1|WP_015941430.1|3311289_3313251_-|hypothetical-protein
MVIAISNTLGQDWRALRTPALWVAVGLLFAIAILTAQIPHQHVIDVGYEEGIGDADLPFLRDFNTAEKSFFGTFRWTSGDSQVFLPTFGLRATVIELHWLPIGAEIVDRVPTTLQVWHENQFIAELPVQRSGSRQWLIVPPTPDGNLRLRLVSDSFQPAQDPRQLSLPLERVIVATVPGGWAWPALTPLAWWIGVVIVGWLILVRTMHRQALWGLAIGSGLLAAAMILDPARWAFGAEAAFAALALTYPLTLAIQAWVRRQIRPQGIADTLSVIVAIAFATRIGGRFYPASMPGDIGFHTNRFHEALGGLITIISKNRGIDFPYPPGPYLLLAPGHVLGIATPLLLQIGAALADSLSALIVYVIARRVLRPRPALLAAAIYVFTAATYLTTWWSFDTHIITQSLYLLFIWGIIRAWEDWRAGQYRHEWIAGLAALSAIVFLGHFGFLISSGTLLGLLIAIVWIARGLGLQWARVVSGSLTLAIGIGALFAIIFFYSAYLPMFLTQLDTARTGGLTAVAGRAPINREALWNNLWQAGLIAHYGLLPIPFALIGLWLLLRRQGRQITIGLMGLSFVVAIIFATLPFITQVSNSPRYLMALGWAIAIGTAATCDTLWQRGWVGRIGVIGAGLFVLFNTCWYWLTPMLWRVRPPEPF
>NC_011831.1|WP_015941431.1|3313330_3317833_-|DNA-directed-RNA-polymerase-subunit-beta'
MLEINDFNAIRISLASPEDIRSWSHGEVTKPETINYRTLKPERDGLFCERIFGPTKDWECFCGKYKRVRYKGVVCDKCGVEVTRAKVRRERMGHINLASPVSHIWFVKGTPSRLGLLLDISPRNLERVLYFASYIIVDVKEDMLQVAREMVQEEYAARREKIQKQAEEKRIELSTQLTQDLGGMETAQRSTQRQIEEDYRRQRDELVGEAERLRERLEEMSGTLADEDIIFRGVTVVEEGELINDNTLDQLDELVEQELEVLEERRRRDLADAELLTDAERERKAYEATQEQERLQERLQRELDMLVREEKEKLEQLDKLKVGLIITENEYRQLRDVAPGVFRADMGAGAIRELLERHLNLDKLAEELQAEIQTSQGQRRKKATKRLRIVEAFRKSGNRPEWMILTVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIELNAPEIIVRNEKRMLQEAVDALIDNGRRGRAVSGKGKHRLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLQLHQCGLPKKMALELFKPFVMRRLVERGVAHNIKNAKRAVERVRPEVWDALEEVIKDYLVLLNRAPSLHRLSIQAFEAKLIEGSAIQLHPLVCAAFNADFDGDQMAVHVPLSRKAQEEARTRMLSKYNLLSPAHGEPIITPSQDIVLGCYYLTMVRDGAKGTGKRFASIDEAMLAYEKGLIDIQAPIWIRMNGSISGKSDRPVRELPPASDGTPRMVIETTIGRVLLNSELQPPLRFRNRLIDKKGLKEIIADCYQYYTSLRNLSEAQLNEVRAAHGNKHVQELARIYGSEMTAQQADRIKTLGFRYATLGGMTIGIDDIEVPAKKYDIVREAEQQVAEVEKQFRRGLITEEERYQEVVRIWQEATKQTIAAVKENLNPFGPVAMMSTSGARGNINQISQMAGMRGLMSDPTGRIIELPIKANFREGLSVLDYFVSTHGGRKGLADTALRTADAGYLTRRLVDVAQDVIINIEDCGTEEGLWLHSADDGELMEKLQVRMLGRILAAPIYDKTTGELIADRNTEIDEELAEKIIAAGHESVFVRSPLTCQAEHGLCRMCYGRNLATGKLVEIGEAVGIIAAQSIGEPGTQLTLRTFHTGGVASADDITQGLPRVQEIFEARVPKGKALLAEIDGVVQIIREDEGVRKIRIVSTNVYTDEYPLTRGFTPVIESESDVYEGQVIAEGPGGEQIIARLSGKAFIQSDRIIISQEDHEERELVVPHNARIRVENGDRVMAGQQLTDGSANPQELLELQGREAVQRYLVNEAQKVYRSQGVNINDKHIEVIARQMLRRVRIEEPGDTGLLPGELIDSAEFRRLNNDIVSQGGDPATAATVLLGITKASLNTDSFLSAASFQETTRVLTDAAIQGKVDYLRGLKENVVIGKLIPAGTGIEKRLERQHEDLISEMARMLEEVQQAEKSAEPTTTALPTTNGHQAPQSDTDALLRARLEELLSGGNDHDDEEDSDHPDLSSL
>NC_011831.1|WP_015941432.1|3318145_3321829_-|DNA-directed-RNA-polymerase-subunit-beta
MPPLIESVVLQPLIAPIDPGFDGRRSRRIERRSFARIKDAIDLPLLIETQLKSFEWFKREGLRELFDEISPITDFTGKNLELHFREYTFGEPRYDEFECRDRDLTYAAPLRVKVELRILTTGEIKESEIFLGDFPMMTDNGTFVYNGAERVVVSQLIRSPGVYFKDEKDPTSGRALHTAKLIPNRGAWLEFETNKRDVISVKVDRKRKIPVTILLRAISAWIANEDGSGRWAPDNELDKYGHNEHLIELFRHVDTVAEHLYIQATIDKDPSHNAKEALLELYKRLRPGDPPTLENARTLIESLLFNPRRYDLAKVGRYKLNKNLWERDARRDGPKAPDLSVRVLLPRDIFRIVEQMILLNNGYGRPDDIDHLGNRRVRTVGELIQQQFRVGLLRLERVVKERMSLQDPASATPNGLINIRPVVAAMREFFGGSQLSQFMDQTNPLAELTNKRRLSALGPGGLSRDRAGFEVRDVHHSHYGRICPVETPEGPNIGLIGTMSTFARVNEMGFLETPYRKVYNSIDNAQVWREKGILLRDVRDLRTGDLIAAKGTRVDDQIARQITIGLLRGQILREDVVDPNTGELIAEAGTEINRALAERIVNLPMKQIKIRPVVSQEVDYLSADEEDRFVIVQANAPLDEHNRFLDTTVSCRFGEDFVTERVERVDYMDVSPKQVVSVSTSLIPFLEHDDANRALMGSNMQRQAVPLLRPDAPIVGTGMEYRTARDSGQVVVARRDGVVVSATGNRIIVEEDDGKRTEYRLRKFMRSNQDTCINQRPSVVRGQQVRAGDVIADSSSTDQGELALGQNVLVAYMPWEGGNFEDAILVSERLVREDIFTSIHIEKYEVEARDTKLGPEEITRDIPNVGQDSLRNLDERGIIYIGAEVQPNDILVGKITPKGETDLTAEERLLRAIFGEKAREVKDSSLRVPNGVRGKVIDVKVFSRSEGAELPVGVNQTVRVLLCQKRKISAGDKMAGRHGNKGVVSRVLPMEDMPFLPDGRPVDIILNPIGVPSRMNIGQILETHLGWAAARLGFRVATPVFDGAHEDQIKDLLVQAGLPADGKVTLYDGRTGEKFDHPVTVGYAYMLKLAHLVEDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVVGRVKTYEAIVKGEPIQEAGVPESFKVLIKELQSLGLSVEVLSADEKPVELSDDLDSDIGALEGINLSGMERGEF
>NC_011831.1|WP_015941433.1|3322181_3323591_-|HAMP-domain-containing-protein
MRPPRLFNLMLTAFALVIVLGISGMVLSFWLVMGQANPGERRWMEAEMAARARATELAAYYRQTGSWRDVERQMGPLPQGFGDIKGSTWLLDANGRIVAGRRRPPILRGNEAVRRIPIIVDGRQVGTLVISVVDDEEAFPVGSVDRRTILLGIIGAGAGLMTILLVLATIFSRQLSTPLRHISAAAHAIAAGDHSSRVQPANVRELADLAASFNRMAAALQQADQQRRQLTADIAHELRTPLSIIKGRLEGIQDGVYEADDEQIEALLAEVALLERLINDLHLLALADAGQLPLYRETVSPVMLVNEAIRSFTQSATERKVALTTTIPSDLPDVDVDPQRIAQVLGNLISNALRHTPPGGEINLAVTADADNVTFHVRDTGSGIDSADLPHIFDRFYRSDRSRTRSSGGAGLGLAIARRLVEAHGGQIWATSQLGHGTTVSFRVPVASPLSPATSYEQEPAIHPTQWPL
>NC_011831.1|WP_015941434.1|3323785_3324496_-|response-regulator-transcription-factor
MKRTILVVDDEPGIVKIARDYLERAGFHVISAGDGPSALRLARQEHPSLIVLDLMLPGMDGLDVTRALRQDPLTAGVPIIMLTARVEETDRLIGLELGADDYITKPFSPRELVARVRAVLRRIEGHLQPTKVIQAGRLTIDLERRIVRRDNEIIELTATEFELLTILASAPGRPFTRAQLLDRIYNTNYIGFDRTIDAHIKNLRRKIEPDPNGPPRLILTVYGVGYKFAEPDAYNQ
>NC_011831.1|WP_015941435.1|3324592_3325105_-|hypothetical-protein
MEQRRLNWPAWLALGISIFALIVAFGSMAMSQRATWMMWRVPNWSNPQIPPAAPPAWHGRGERGPIVPGWQGRGERGPAAPGWYGRGERGFAPMPGWGMPGIMGGKGWFGGFFGGLFRLIDGLLKLAALALLVWLGIRIFRQRQNPPAATPPNTPPTPPLTPAGHDPRVE
>NC_011831.1|WP_015941436.1|3325220_3328205_-|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme
MPWSTALARHYHIHGTVTSLPGEYDLNLLVTASDGMQYVLKVMRPHCDPTLVDLQCAALEHLAVVAPDLPVPRLIRTTTGERFVAEQDRLIWLITALPGEHYATFRPRTTTLHTEVGRQAARLDQALGSFTHPTLHRPLKWNLLQADWATTALAAITDPTQRDLAATALAAYTDLRPNLLQLPLTIIHNDLNDYNLLVMADSYGHLTLSGILDFGDLCAAPRVCELAIAAAYALFDQPDPIRTLGELVAGYHSVWPLTAAEIDLIWPLIRTRLAVSVVNSALMKQQRPDDPYVTISEAPAWRLLAATAHNNPALVAARLRAICNLPISDAAERVMVWLDAQRGRFAPVIGCDLATVPVISLAVGEAPLPQDPFQLTTTEAEALTGSNTGVCIGRYGEPRLIYTAATFWTAPQPLAERRTIHLGVDLFAPPGTPVCAPLDGEVVAVEHLSDRLDYGGLVILKHYTPNGDPFYTLYGHLEPICFKRLTVGQHIAAGQLFAALGMNSNNGGWQPHLHFQLILLYDAVAGHWPGVAAASEWTWWHAVCPNPAALLNLPDERVAYQPLDQVSLLHERRTHFAGNLRLSYREPCTFLRGWRHYLFDEYGQTYLDAYNNVPHVGHAHPRIQAVAAQQLRLLNTNTRYLHPAQIAFAHELLAKLPPSLSVCFFVNSGSEANELALRLARTYTGGHDMITIDHGYHGHTTGAIAISAYKFNHPAGNGKPDWVEVVMAPDPYRGPYGHDGPRYAAEVDQAIERIATRGGKLAGFIAETFPSVAGQIIPPPGYLAAVYQRIRAAGGVCIADEVQTGLGRLGTHYWAFESQGVVPDIVVLGKPLGNGHPIGAVITTVEIARAFDNGLEFFSTFGGSTLSCVIGREVLRIIDEEGLMDNAHCVGQVLLTGLRDLQHRHPVISDVRGMGLFIGVELVTDRTTRTPATAAARYVRERLRAERILIGTEGPADNVLKIRPPLTFDLAATTVFLERLDAILGESFIARQGG
>NC_011831.1|WP_015941437.1|3328509_3334980_-|pullulanase-type-alpha-1,6-glucosidase
MHHRGLRLLLTLATVFGFIMLAVPRPVAAAGEQVRGELTNWASSPWNMSASLGGTFVYVSGQINATDDPTSEFKFYKDTNQWFGRNPATTITFGQIFTDLSSSGSEPNLSFNHISGSYYAFKWDGGTRGVVFRFSAAPATISGVSRSPAAPTAGQAVTVTATTNVTPPAEQALWLRYAVNGNWAASTVVKMTGSGTSFSATIPSQTAGTTVSYYVFSSGDVSAIAGADADLMTINADTNGGSNYSYTVSSGTSAITPAQARALWLDLSTIAWNGGPAASFRLLYDPDGGLTTAAEATACTFPSPAAPCYVPLTISGTVSGFVKNPNATGLTRLLTGLSAANAAHLLRGQVVVAAYDGSGNRVDATRVQIQGVLDDLYAANATTQTLGVSYSGGAPTVRLWAPTAQSVTLRRFANSTTTAYTAHPMTFEPTSGVWSVTGDASWDRQFYLFAVEVYVPALDAVVTNLVTDPYAVSLSQDGAAAGDVRSQFVNLDDTDLKPAGWDTLSKPALTNPEDIVIYEVHIRDFSANDSTVAATDRGTYRAFTYDGSGPHPNTTLSDGMNHLLQLRQAGLTHIHLLPAFDIASVIENPADRTEPTISFNPATDRAATGPQAGVGAARQTDSFNWGYDPYHYGVPEGSYSTNPDGVARILEFREMVQALNQNGLRVVMDVVYNHTAASGQDDKSVLDKIVPGYYYRYDTNGNLAQSSCCADTATEYAMMEKLMIDTVVRFATAYKIDGFRFDLMNLHTRQNMLNVRAALQALTPATHGVDGSKIYLYGEGWDFGSAKDKGLTVCPHCYAHKYNMTGSGIGVFNDIIRDAAHGGYSTDTVGIRRQGFINGLSYDWNGYAYPNRFQSDLHVVMDTLRSALRGSGTDWNGQGNPFTDDPQESINYVEKHDNETLFDQNVFKLPNGNGSGNPGWIGGSGIATTTMADRVRSQNMGVSLIGLAQGIPFFHMGQDILRSKSLDRNSYDSGDWFNRVYWDRSANNFGRGLPPTWDNNSRWGIMTPLLNNTALDPAPADMNFAAAHMRETLRLRMSSPLFRLTTEAAINARVSHYNTDNSRDALIVMRLSDEVAPDLDPNWENILVFFNANTTTQTITIPNANGFTLHPLHTNGVDDDPVIATASFNDATDTFTIPPRTTVVFVSTQPLEPPSTIDWVGLMYPRGGVAHAIDQGSFAPAGFDVFVQVYEAGVTPGAGQGAGIECFLHWGRYGQPWTDLPMTYNTDIGNNDEYRATIPKTVIESLAHGTYGFTAYCKKTAETGRKWKADSYDINGNPADNDQGDGLLTIIPTTDPAPEPTGGVFVHLFEWRWTDVAKECTFLGQKGYTGVQVSPPNEHIVPTADLGGNPANDFPWWARYQPVTHDTSRFTSRSGTWAEFQQMVNACNSAGVAVIVDAVINHMADIEVGSPPTGTAGTQYKSQPAANRFYGTQYTPDDFHPDCLITNYQDRYQVQRCQLAGLPDLDTGKAAVQTKLRNYLQALLNAGVRGFRIDAAKHMAAHDVGAILNGLTLPGGGQPYIFSEVIDMDPAERIRDWEYTPYGDATEFAYSISVIGNNFNCGGSLSSLQSFTSGLLPSRFAQIFVDNHDNQRGHGPGGACVVDHRDGRTHLLANVFTLAQPYGHPSVMSSYYWTTNPNSNAGDSLGPPSSNDGGITWGPGLGADTRPVYGPGQVAGAYPANCSGNYPNPVTSADLGTWVCEHRHPAIANMVQFRQTTAGEPISDWQNIGGTPSNHIAFGRGNKGFVAINNTTTAATTTYQTSLPAGFYCDITKYDFVGGICVLPGTTTPAPASTLIEVNGSGQIVNYTLAARDAFAIHINARPSYQITVSAEPASGGTVSGGGAYPHGAVVTVNATPASGYTFVNWTEGATIVATTASYSFMATGNRTLTANFAPIVPTATPTNTPTATNTPTNTPTNTPTNTPTNTPTATNTPTNTPTNTPTNTPTATNTPTATNTPTNTPTNTPTNTPTNTPTATNTPTNTPTATNTPTNTPTNTPTATNTPTPTNTPTNTPTNTPTPTNTPTATNTPTNTPTNTPTATNTPTATNTPTATNTPTNTPTPTNTPTATNTPTNTPTPTNTPTATNTPTNTPTNTPTPTNTPTNTPTNTPTNTPTATNTPTNTPTATATPTATATPTPTSVITAPSYWIYIPVIIR

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Crispr_ID: NC_011831_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_27

3342947-3343136

Orphan

Consensus_repeat	Method
GGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTGT	PILER-CR
GGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_011831_27

>merge|NC_011831|27|3342947-3343136|PILER-CR,CRISPRCasFinder
GGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTGTCGCAAATTTTCTCTCCAAGATCGCACGCGCAAATTGCGGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTGGGCCGTCGTTGGTGAACCACGGGAGGAAGCATTATTGGGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTGT

>NC_011831|27|5|3342947-3343136|PILER-CR
GGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTGT	CGCAAATTTTCTCTCCAAGATCGCACGCGCAAATTGC
GGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTGG	GCCGTCGTTGGTGAACCACGGGAGGAAGCATTATTG
GGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTGT

>NC_011831|27|23|3342947-3343135|CRISPRCasFinder
GGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTG	TCGCAAATTTTCTCTCCAAGATCGCACGCGCAAATTGC
GGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTG	GGCCGTCGTTGGTGAACCACGGGAGGAAGCATTATTG
GGCGCGAAGGACGCAGAGCACGCAGAGGTTTTTTGTTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015941443.1\|3340909_3342331_+\|iron-sulfur-cluster-binding-protein	unknown	unknown	gnl\|CDD\|224062
NC_011831.1\|WP_015941434.1\|3323785_3324496_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_011831.1\|WP_015941448.1\|3347933_3350030_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941451.1\|3351876_3354267_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NC_011831.1\|WP_015941441.1\|3337909_3339751_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
NC_011831.1\|WP_015941437.1\|3328509_3334980_-\|pullulanase-type-alpha-1,6-glucosidase	unknown	unknown	gnl\|CDD\|273974
NC_011831.1\|WP_015941453.1\|3355156_3356650_+\|biotin/lipoyl-binding-protein	unknown	unknown	gnl\|CDD\|273776
NC_011831.1\|WP_015941447.1\|3345201_3347376_+\|ATP-dependent-RecD-like-DNA-helicase	unknown	unknown	gnl\|CDD\|273632
NC_011831.1\|WP_015941442.1\|3339920_3340664_+\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|223325
NC_011831.1\|WP_049762838.1\|3350216_3350615_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236541
NC_011831.1\|WP_015941449.1\|3350833_3351046_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941452.1\|3354465_3355143_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NC_011831.1\|WP_015941433.1\|3322181_3323591_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|182539
NC_011831.1\|WP_015941435.1\|3324592_3325105_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941450.1\|3351221_3351518_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941440.1\|3336736_3337681_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274382
NC_011831.1\|WP_015941436.1\|3325220_3328205_-\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|180426
NC_011831.1\|WP_015941445.1\|3343203_3343899_+\|lactate-utilization-protein	unknown	unknown	gnl\|CDD\|376839
NC_011831.1\|WP_041470614.1\|3342393_3342846_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_011831.1\|WP_015941446.1\|3343974_3344943_+\|D-glycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240626

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015941443.1\|3340909_3342331_+\|iron-sulfur-cluster-binding-protein	gnl\|CDD\|224062	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion].	0
NC_011831.1\|WP_015941434.1\|3323785_3324496_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.53023e-87
NC_011831.1\|WP_015941451.1\|3351876_3354267_+\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	4.16332e-21
NC_011831.1\|WP_015941441.1\|3337909_3339751_-\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NC_011831.1\|WP_015941437.1\|3328509_3334980_-\|pullulanase-type-alpha-1,6-glucosidase	gnl\|CDD\|273974	TIGR02103, pullulanase-like_protein_starch, alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NC_011831.1\|WP_015941453.1\|3355156_3356650_+\|biotin/lipoyl-binding-protein	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.22598e-18
NC_011831.1\|WP_015941447.1\|3345201_3347376_+\|ATP-dependent-RecD-like-DNA-helicase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	0
NC_011831.1\|WP_015941442.1\|3339920_3340664_+\|(Fe-S)-binding-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	1.33769e-52
NC_011831.1\|WP_049762838.1\|3350216_3350615_-\|hypothetical-protein	gnl\|CDD\|236541	PRK09496, trkA, Trk system potassium transporter TrkA.	1.14422e-14
NC_011831.1\|WP_015941433.1\|3322181_3323591_-\|HAMP-domain-containing-protein	gnl\|CDD\|182539	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS.	2.35479e-82
NC_011831.1\|WP_015941452.1\|3354465_3355143_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.60079e-106
NC_011831.1\|WP_015941440.1\|3336736_3337681_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274382	TIGR02997, RNA_polymerase_sigma_subunit_sigma70/sigma32, RNA polymerase sigma factor, cyanobacterial RpoD-like family. This family includes a number of closely related sigma-70 (TIGR02937) factors in the cyanobacteria. All appear most closely related to the essential sigma-70 factor RpoD, and some score above trusted to the RpoD C-terminal domain model (TIGR02393).	3.74588e-103
NC_011831.1\|WP_015941436.1\|3325220_3328205_-\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|180426	PRK06148, PRK06148, hypothetical protein; Provisional.	0
NC_011831.1\|WP_015941445.1\|3343203_3343899_+\|lactate-utilization-protein	gnl\|CDD\|376839	pfam02589, LUD_dom, LUD domain. This entry represents a domain found in lactate utilization proteins B (LutB) and C (LutC), as well as several uncharacterized proteins. LutB and LutC are encoded by th conserved LutABC operon in bacteria. They are involved in lactate utilization and is implicated in the oxidative conversion of L-lactate into pyruvate.	1.77642e-40
NC_011831.1\|WP_041470614.1\|3342393_3342846_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.58864e-18
NC_011831.1\|WP_015941446.1\|3343974_3344943_+\|D-glycerate-dehydrogenase	gnl\|CDD\|240626	cd05301, GDH, D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH). D-glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase, HPR) catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. In humans, HPR deficiency causes primary hyperoxaluria type 2, characterized by over-excretion of L-glycerate and oxalate in the urine, possibly due to an imbalance in competition with L-lactate dehydrogenase, another formate dehydrogenase (FDH)-like enzyme. GDH, like FDH and other members of the D-specific hydroxyacid dehydrogenase family that also includes L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase, typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form, despite often low sequence identity. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	8.62323e-174

>NC_011831.1|WP_041470614.1|3342393_3342846_+|GNAT-family-N-acetyltransferase
MRITIHAERPDTAEALALIEELEAELAPLYPPESQHGYSVEKLIAQGVAFFVVRVNGEAAGCGGIQLYPNYGELKRMYVRPAFRGMGLAQRLIDHLAAYALARGCRLLRLETGTLQHAAIRCYEKAGFYQIGPFGEYPNDPLSLFYERRL
>NC_011831.1|WP_015941443.1|3340909_3342331_+|iron-sulfur-cluster-binding-protein
MPQTITFYDRVDHALHDDSLQTALHRATTRFIGNRAGAIGALCDPDRLRDQARAIRAYALAHLDELLPQLAANVEARGGHVCWASDGEEARRYIVELARARGVRSIVKSKSMASEEIHLNKALEYAGFEVVETDLGEYIIQLAGETPSHITAPAIHKTREQVSELFQQHLGMPPTTEVPSMIRTARQALRQRFLQADMGISGVNFGVADSGAIVIVENEGNARLSTTVPRIHVAIMGIERIVARLADLGVMLQVLARSATGQKLSVYTSLISGPARPGEEDGPEEFHLVLLDNGRSRILGGQYAESLLCIRCGACLNACPVYQAIGGHAYGGVYSGPIGAILTPLLQPDLPDAYLLPQASSLCGACQEVCPVRIAIPDMLLRHRADAVKAGKVNPVEKAAITGYTMTMTHPAIYDTAGKVGRFFSRILARKGRFRRLPPPLHLWTKERDFPALPPKSFRELWAERKKQRQSSS
>NC_011831.1|WP_015941442.1|3339920_3340664_+|(Fe-S)-binding-protein
MTTGRRRAVLFATCIVDQLYPTVGLAAAELLEQQGVTVEVPPDLLCCGQMAFNAGFRDDAYTVAGRTLEVLRGKGDVVLPSGSCAAMIRHLYHELFAHTPFAGMAADLAHRTYELSEYLVDVLGVTDTGARFNGRITYHDACHGLRFLGLGAQARTLLGHVQGAEVVPLPGCDQCCGFGGLFAVKQHSISAAMLDHKIKAIAATDADLVVTGDVSCMTQIAGGLSRRNSPIRARHLAEVLANMVDAR
>NC_011831.1|WP_015941441.1|3337909_3339751_-|translational-GTPase-TypA
MIQRTDLRNIAIIAHVDHGKTTLVDAMLKQSRIFRQNQQVEERVLDSNALERERGITILAKNIAVTYRGVKINIVDTPGHADFGGEVERVMNMVDGVLLLVDAVDGPMPQTKFVLRKALQAGHQAIVVVNKIDRPQARPNHVVNETFDLFVDLGATDEQAEFATIYTNALLGHAGRSPLKLHDSLEPLFECILDRILPPTVDVEGPVQFLVTTSTYDEYKGKILTGRLVRGTIRKGQPLVRIARDGAITPAKVSQIFVYNGLERQEVEQAQAGDIIAIAGIPDAAIGDTIADAQAPEALPPIKVEEPTVRMTFGVNTSPFAGREGTYVTSRKLRERLFQEMERDVALRVEETESPDVFVVAGRGELHLGILIETMRREGYEFQVSKPEVIFREAPDGTRLEPMELVEIEVASEYQGVVVELMGKRQGQMRDMRISEDGSVHYVYLVPTRGLLGFRQLFLTATRGTGIMNSIFFGYEPYAGEIEVRANGSLIAAEGGVATTYAIHALQDRGVFFITPGQEVYEGMVVGQHIRDNDLEVNVCKEKHLTNMRNNRGAETIRLDAPRQLSLDDAIEYIGDDELVEVTPKGWRIRKKLLSADDRRREKKRRELAMSER
>NC_011831.1|WP_015941440.1|3336736_3337681_-|sigma-70-family-RNA-polymerase-sigma-factor
MSNPTTIGRSASDTIVLYLNEIGAEPLLTFEQEQQLAQTIAQGRRAAERLTNEPSLHSTEKKRLAAQVAAGEQARAQLINSNLRLVVSIARRYQGHGLTLLDLIQEGSIGLMRAVDKFDAGRGLKFSTYATYWIRQSIGRAIADHSRTVRLPVHLGERLSRLARLRQELAQQLDREPTLEELANAAGLSVEQVERAEQAGLAPTSLDEAHTEDGGGALSEILTDPLQPTPFDEVSEGMLQADVQAALSQLSPRERNILRLRYGLDGEPMHTLEQIGQRLRLTRERVRQLEYEALRKLRDPSLYPQLQGYVNDTI
>NC_011831.1|WP_015941437.1|3328509_3334980_-|pullulanase-type-alpha-1,6-glucosidase
MHHRGLRLLLTLATVFGFIMLAVPRPVAAAGEQVRGELTNWASSPWNMSASLGGTFVYVSGQINATDDPTSEFKFYKDTNQWFGRNPATTITFGQIFTDLSSSGSEPNLSFNHISGSYYAFKWDGGTRGVVFRFSAAPATISGVSRSPAAPTAGQAVTVTATTNVTPPAEQALWLRYAVNGNWAASTVVKMTGSGTSFSATIPSQTAGTTVSYYVFSSGDVSAIAGADADLMTINADTNGGSNYSYTVSSGTSAITPAQARALWLDLSTIAWNGGPAASFRLLYDPDGGLTTAAEATACTFPSPAAPCYVPLTISGTVSGFVKNPNATGLTRLLTGLSAANAAHLLRGQVVVAAYDGSGNRVDATRVQIQGVLDDLYAANATTQTLGVSYSGGAPTVRLWAPTAQSVTLRRFANSTTTAYTAHPMTFEPTSGVWSVTGDASWDRQFYLFAVEVYVPALDAVVTNLVTDPYAVSLSQDGAAAGDVRSQFVNLDDTDLKPAGWDTLSKPALTNPEDIVIYEVHIRDFSANDSTVAATDRGTYRAFTYDGSGPHPNTTLSDGMNHLLQLRQAGLTHIHLLPAFDIASVIENPADRTEPTISFNPATDRAATGPQAGVGAARQTDSFNWGYDPYHYGVPEGSYSTNPDGVARILEFREMVQALNQNGLRVVMDVVYNHTAASGQDDKSVLDKIVPGYYYRYDTNGNLAQSSCCADTATEYAMMEKLMIDTVVRFATAYKIDGFRFDLMNLHTRQNMLNVRAALQALTPATHGVDGSKIYLYGEGWDFGSAKDKGLTVCPHCYAHKYNMTGSGIGVFNDIIRDAAHGGYSTDTVGIRRQGFINGLSYDWNGYAYPNRFQSDLHVVMDTLRSALRGSGTDWNGQGNPFTDDPQESINYVEKHDNETLFDQNVFKLPNGNGSGNPGWIGGSGIATTTMADRVRSQNMGVSLIGLAQGIPFFHMGQDILRSKSLDRNSYDSGDWFNRVYWDRSANNFGRGLPPTWDNNSRWGIMTPLLNNTALDPAPADMNFAAAHMRETLRLRMSSPLFRLTTEAAINARVSHYNTDNSRDALIVMRLSDEVAPDLDPNWENILVFFNANTTTQTITIPNANGFTLHPLHTNGVDDDPVIATASFNDATDTFTIPPRTTVVFVSTQPLEPPSTIDWVGLMYPRGGVAHAIDQGSFAPAGFDVFVQVYEAGVTPGAGQGAGIECFLHWGRYGQPWTDLPMTYNTDIGNNDEYRATIPKTVIESLAHGTYGFTAYCKKTAETGRKWKADSYDINGNPADNDQGDGLLTIIPTTDPAPEPTGGVFVHLFEWRWTDVAKECTFLGQKGYTGVQVSPPNEHIVPTADLGGNPANDFPWWARYQPVTHDTSRFTSRSGTWAEFQQMVNACNSAGVAVIVDAVINHMADIEVGSPPTGTAGTQYKSQPAANRFYGTQYTPDDFHPDCLITNYQDRYQVQRCQLAGLPDLDTGKAAVQTKLRNYLQALLNAGVRGFRIDAAKHMAAHDVGAILNGLTLPGGGQPYIFSEVIDMDPAERIRDWEYTPYGDATEFAYSISVIGNNFNCGGSLSSLQSFTSGLLPSRFAQIFVDNHDNQRGHGPGGACVVDHRDGRTHLLANVFTLAQPYGHPSVMSSYYWTTNPNSNAGDSLGPPSSNDGGITWGPGLGADTRPVYGPGQVAGAYPANCSGNYPNPVTSADLGTWVCEHRHPAIANMVQFRQTTAGEPISDWQNIGGTPSNHIAFGRGNKGFVAINNTTTAATTTYQTSLPAGFYCDITKYDFVGGICVLPGTTTPAPASTLIEVNGSGQIVNYTLAARDAFAIHINARPSYQITVSAEPASGGTVSGGGAYPHGAVVTVNATPASGYTFVNWTEGATIVATTASYSFMATGNRTLTANFAPIVPTATPTNTPTATNTPTNTPTNTPTNTPTNTPTATNTPTNTPTNTPTNTPTATNTPTATNTPTNTPTNTPTNTPTNTPTATNTPTNTPTATNTPTNTPTNTPTATNTPTPTNTPTNTPTNTPTPTNTPTATNTPTNTPTNTPTATNTPTATNTPTATNTPTNTPTPTNTPTATNTPTNTPTPTNTPTATNTPTNTPTNTPTPTNTPTNTPTNTPTNTPTATNTPTNTPTATATPTATATPTPTSVITAPSYWIYIPVIIR
>NC_011831.1|WP_015941436.1|3325220_3328205_-|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme
MPWSTALARHYHIHGTVTSLPGEYDLNLLVTASDGMQYVLKVMRPHCDPTLVDLQCAALEHLAVVAPDLPVPRLIRTTTGERFVAEQDRLIWLITALPGEHYATFRPRTTTLHTEVGRQAARLDQALGSFTHPTLHRPLKWNLLQADWATTALAAITDPTQRDLAATALAAYTDLRPNLLQLPLTIIHNDLNDYNLLVMADSYGHLTLSGILDFGDLCAAPRVCELAIAAAYALFDQPDPIRTLGELVAGYHSVWPLTAAEIDLIWPLIRTRLAVSVVNSALMKQQRPDDPYVTISEAPAWRLLAATAHNNPALVAARLRAICNLPISDAAERVMVWLDAQRGRFAPVIGCDLATVPVISLAVGEAPLPQDPFQLTTTEAEALTGSNTGVCIGRYGEPRLIYTAATFWTAPQPLAERRTIHLGVDLFAPPGTPVCAPLDGEVVAVEHLSDRLDYGGLVILKHYTPNGDPFYTLYGHLEPICFKRLTVGQHIAAGQLFAALGMNSNNGGWQPHLHFQLILLYDAVAGHWPGVAAASEWTWWHAVCPNPAALLNLPDERVAYQPLDQVSLLHERRTHFAGNLRLSYREPCTFLRGWRHYLFDEYGQTYLDAYNNVPHVGHAHPRIQAVAAQQLRLLNTNTRYLHPAQIAFAHELLAKLPPSLSVCFFVNSGSEANELALRLARTYTGGHDMITIDHGYHGHTTGAIAISAYKFNHPAGNGKPDWVEVVMAPDPYRGPYGHDGPRYAAEVDQAIERIATRGGKLAGFIAETFPSVAGQIIPPPGYLAAVYQRIRAAGGVCIADEVQTGLGRLGTHYWAFESQGVVPDIVVLGKPLGNGHPIGAVITTVEIARAFDNGLEFFSTFGGSTLSCVIGREVLRIIDEEGLMDNAHCVGQVLLTGLRDLQHRHPVISDVRGMGLFIGVELVTDRTTRTPATAAARYVRERLRAERILIGTEGPADNVLKIRPPLTFDLAATTVFLERLDAILGESFIARQGG
>NC_011831.1|WP_015941435.1|3324592_3325105_-|hypothetical-protein
MEQRRLNWPAWLALGISIFALIVAFGSMAMSQRATWMMWRVPNWSNPQIPPAAPPAWHGRGERGPIVPGWQGRGERGPAAPGWYGRGERGFAPMPGWGMPGIMGGKGWFGGFFGGLFRLIDGLLKLAALALLVWLGIRIFRQRQNPPAATPPNTPPTPPLTPAGHDPRVE
>NC_011831.1|WP_015941434.1|3323785_3324496_-|response-regulator-transcription-factor
MKRTILVVDDEPGIVKIARDYLERAGFHVISAGDGPSALRLARQEHPSLIVLDLMLPGMDGLDVTRALRQDPLTAGVPIIMLTARVEETDRLIGLELGADDYITKPFSPRELVARVRAVLRRIEGHLQPTKVIQAGRLTIDLERRIVRRDNEIIELTATEFELLTILASAPGRPFTRAQLLDRIYNTNYIGFDRTIDAHIKNLRRKIEPDPNGPPRLILTVYGVGYKFAEPDAYNQ
>NC_011831.1|WP_015941433.1|3322181_3323591_-|HAMP-domain-containing-protein
MRPPRLFNLMLTAFALVIVLGISGMVLSFWLVMGQANPGERRWMEAEMAARARATELAAYYRQTGSWRDVERQMGPLPQGFGDIKGSTWLLDANGRIVAGRRRPPILRGNEAVRRIPIIVDGRQVGTLVISVVDDEEAFPVGSVDRRTILLGIIGAGAGLMTILLVLATIFSRQLSTPLRHISAAAHAIAAGDHSSRVQPANVRELADLAASFNRMAAALQQADQQRRQLTADIAHELRTPLSIIKGRLEGIQDGVYEADDEQIEALLAEVALLERLINDLHLLALADAGQLPLYRETVSPVMLVNEAIRSFTQSATERKVALTTTIPSDLPDVDVDPQRIAQVLGNLISNALRHTPPGGEINLAVTADADNVTFHVRDTGSGIDSADLPHIFDRFYRSDRSRTRSSGGAGLGLAIARRLVEAHGGQIWATSQLGHGTTVSFRVPVASPLSPATSYEQEPAIHPTQWPL
>NC_011831.1|WP_015941445.1|3343203_3343899_+|lactate-utilization-protein
MSREQILANLRTSLNANRPWLLAEAERMPHEPPPFVLPAQDDLVGQFIDELTRLEGKAYRVGSADAALAIVDRLIEETQATSVIGWDLDQIGLPGLPELLTARGVKLAVADVRGEGRKNRFQELEPIPVCLSGAELVIAESGTLLLRHGPGRPRIASLLAPCHIAVVFRHQVVRGLGEALALLAQRYGDDIFGSTSNLTFITGPSRTADIEMTLSLGIHGPPQIHVIVVEN
>NC_011831.1|WP_015941446.1|3343974_3344943_+|D-glycerate-dehydrogenase
MKIKPPIFVTRRLPDPAMAILAEHCTVSWWDQVEMPIPRDELLRGVAAAEGLLCLITDRIDAEVIAAAPRLCAVSIMAVGYDNIDRAALAARGITLTNTPDVLTETTADLAWALLLAAARRVVEGHKLIERGEWGPWHPLQMVGQDIYGRVLGVVGAGRIGQAVLRRGRGFGMRLIYHNRRPNPILAAELGAEYRPLNDLLAESDAVVVTAPLTDETRGMFGSAQFALMKPASIFVNVARGPLVREDELVAALRAGRPWAAGLDVFDREPIGPDHPLLALPNVVLTPHIGSASVATRVRMATLAAENLVAVLSGRATPHIVK
>NC_011831.1|WP_015941447.1|3345201_3347376_+|ATP-dependent-RecD-like-DNA-helicase
MPQLDGILERITFQSESDGYTVARLRPTGKHSTITIVGKLLGVRPGEHLILEGEWRDHPIHGRQFSVQSYRSYLPATIDGIRRYLGSGLIKGVGPAMAKRITETFGKYTLDVLDREPERLSEVPGLGRKKAALIAAAWREQQRIKDLMILLQDFGLPTGIAVRIYKHYGDDALSIVQHEPYRLADEVDGVGFRTADTIAVGLGIARDDPRRIAAGLRYALGQASNAGHCYLPRLELIERAAALLTVSQAQVVAVLDTLLANNLLWRDTVVTATDPDLQPIYLPPLAFAEIGVANAIRRFLAQRTALAERYASSRWEKVFAHLAERRGLLLSPQQQQAVRTALTTPVMLLTGGPGTGKTTSLRALVILLLARGYRPLLAAPTGRAARRLSEATGVEARTIHRLLEYGADGSFRRNAEYPLECDLLVIDEASMLDVVLANQLLKAVQPDTHLLIVGDADQLPSVGPGRVLGDLIDSGIVPRIHLDAIFRQAAGSGIATNARRINDGLLPDWGGHDDFYFFAAETPERCAELVVELVVERIPRRFGYDPRRDIQVLSPTHKGVAGVAALNTALQAALNPPRPGVAEYHRGDTIFRVGDRVIQQRNDYERDVYNGDTGEVIAIDATAPTVVVRFEDGRAIRYSSLDLDDLTLAYALSVHKSQGSEYPVVVLPLLLQHQPLLQRNLLYTAVTRARQLVVIVGDRRAVAAAVAAAEVERRYTGLSVRLRE
>NC_011831.1|WP_015941448.1|3347933_3350030_+|hypothetical-protein
MSRSVREYLQHALIAAGGSLVVIGLLIVMNSGLTEWVLSLVAVWKGKPPAPHWLVKIHAIGIEALVSGIALVALGWVALPRWNWLAALAQQDSVVLTVALLAIGGLWLPVALIGHSAVIGGERYWWLDDDAMISMRYARHLAQGAGLVWNLDGERVEGYTNLLWTLYMALVHLLPIPVAQTSLIILLTNITLAVATVPIIIRFVRALGGSPLVVAATVLGFVLNKNVMAWTTSGFETTLLMWLFLLAAYRIITEAQQRMPRLFTFVIIALLSLVRSDAVILSVLLYALAVWLNSNRMLIIGYAALSLALPIAHVLFRALYYGDVLPNTAYLKVFGWEGALLAGFRYFAAFAMHYPFALGFALIGSLLTKDKVRRALLAVVLAYVAYVIYVGGDAFPNFRFFIPILPLILALAFLGVQSLIRTVWTTPVQGEQLFAPRTILLAVGLSVVVSGVTMAALAPMIDLLVARAQSGSAINQWFVFIIGVSALAGSVAAFFGRNALQRMLLQPAVAFRLWFGLLCLIGTPLLVPGYSWFLLPYEADVGNVTIGLLLKRNTPPTSKVADFWAGSVFYFSERYAIDLLGKSDRHIARLPAASSGTMPGHNKFDFDYSLGVLQPDFVVANYALPVNEAMLRQLATGDVAFTGQLYFNRVFQQHCLPYPIPINTWRTIFVCDWSEQISERHDWDACSITTAGNCAAER
>NC_011831.1|WP_049762838.1|3350216_3350615_-|hypothetical-protein
MPRVIARVNQKNAWLYTSTFGVDVALNQAELLASLIIAEMSLGEITTLLKLCKGLYSLVEEKVDLTSIANGEAIRDLPLPPRCVLAAIIRKGELIIPRGNTILHPADEVLAVIHSTELAQLAAILRPAPHHS
>NC_011831.1|WP_015941449.1|3350833_3351046_+|hypothetical-protein
MMQAIEFQATVKNGLIELPPQYAQLTGQVRVIVLVEPTMQTRGNVIDQLLAQPVRIPNVRPLSRAEIYAR
>NC_011831.1|WP_015941450.1|3351221_3351518_+|hypothetical-protein
MYVQHMNEAGRALLAALETKDPNAIQASAKQFAQAVEAAWQAYLRGEVATQTRGQALPRTMHQFATVELPAKAADPQAWPAIARETRIFLNMLGVVAG
>NC_011831.1|WP_015941451.1|3351876_3354267_+|FtsX-like-permease-family-protein
MLTPRWRKVIRDLRVFPTRTALVTLSIAVGVFAFGVILTARAVIGRELQRSFEAINPVSAIITTTTFDTDLAETVERLPEVAVAEGRRVVPARIRIGPDRWEDALITLLPDDGIRRIGIVRPQVGAWPPRERAILVERASLARAGLAIGETVVVELPGIGERAMPVAGTIHDLSTPLAVLTAQTFIYMTEDTLRWLGGPTGYNQLHLIVNGDRRDVTKIRAMASVVEQLLERSGHPVIQTYVPPPMQHPAEALLPVITVLMFIVGVLALVASSFLSINTISAILNQQTRQLGIMAAIGAGPKTLATMYMATAALFGLLALVLAVPAGLLASQGLAGFLAGQLNIDLPWPVWSGEILLLQIVAGITVPVLTALWPIRSALRRPVRELLSGETAPPPPPVVITLLTRILGRFLRRPTLLALRNAFRQRARLLRTLLALALGGSVLITVMTQRTSLFATLEASLAGLNYDLEVQLAHSYRIERIAPLIASLPAVTRIESTLRAPAFPVRPDGTDGEELALRALPADTDFFHPRLAEGRWLAGPGVREVVFSTNIRSKEPYLRIGDWVTLSIEGCESQWRLVGLIEVFTPPTMPAQAYVDISAFTDEQGGVGRTDTVRVATIGHDPASHAAAAAAIEQQLTAYGIDLRLIRTMSEERRILEERFNLATGAISIMALIIGTVGALGLTGTLSINVLERTREIGILRAIGASDDAIRELVVTEGLTIALLAWVGGVILSIPMSYALAYNFGMALLNIPLIWVYSFPAIWMWLGVVILFALVSSVLPARAATRIAVREALAYE
>NC_011831.1|WP_015941452.1|3354465_3355143_+|ABC-transporter-ATP-binding-protein
MNQPLILLSSVTKAYATAAGDYLALRGIDLRIEPGEFVAIVGKSGSGKSTLLNVITGIDRASSGEVLVAGADLMRMPAAQMAAWRGRTVGIVFQFFQLLPTLTALENVMLPMDFANLGTPRERRARALALLERVGLADQAEKLPLALSGGQQQRVAIARALANNPPLLVADEPTGNLDSQTAEAVFELFVELAGLGTTIVMVTHDSELARRAGRMVLVADGQIVG
>NC_011831.1|WP_015941453.1|3355156_3356650_+|biotin/lipoyl-binding-protein
MRKLIIPLIAVILILGGAYAIFGPNGPGAQSAPPPIPTGDTVVPPVSVEGRVVPLQYAWLRFERSGMVSAILVAEGDQVAAGQALAQLDDRAQRLAVQQAEANLARAQARYAQLLAGAAPETRAAAEAAVQVAAAQATQVALSVAAPDEKAALAQLAEAKAARAELLAGADPEVVAQAQAARDQAAANLAAQRSALAAAKVNAQLAVEQAANVLRDRQADYSRIHWENEELKQRLGEDELPQARIDLEAAALHAVQNAEVALAQARINAEQAVQAEIEGIAAAEARLREAEARLAALLSPPAADKLAAIDARIAAAEATLARLRGDPRQAQVAVAQAQVALAQAQAAQVNAAPREEEVALAQAEVAAAEAALAQARLELDKLTLRAPFAGTVARLELRLGELATPTAPALLLGDLSVWRIETIDLNEIDAARIAPGAAVTVTFDALPGVALPGRVIAIEPYGTDRLGEVVYTATIELTQTDQRLHWNMTAVITFNGS

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Crispr_ID: NC_011831_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_28

3354283-3354357

Orphan

Consensus_repeat	Method
GACGCCAAGGGGCAAAGACGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_28

>merge|NC_011831|28|3354283-3354357|CRISPRCasFinder
GACGCCAAGGGGCAAAGACGCAGTAGCGACGGACGACTGTCCGTCTCCCGTGACGCCAAGGTGGCAAAGACGCAG

>NC_011831|28|24|3354283-3354357|CRISPRCasFinder
GACGCCAAGGGGCAAAGACGCAG	TAGCGACGGACGACTGTCCGTCTCCCGTG
ACGCCAAGGTGGCAAAGACGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015941451.1\|3351876_3354267_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NC_011831.1\|WP_015941456.1\|3358550_3359354_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NC_011831.1\|WP_015941448.1\|3347933_3350030_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_085953551.1\|3362907_3363558_+\|glucosaminidase-domain-containing-protein	unknown	unknown	unknown
NC_011831.1\|WP_049762840.1\|3361180_3361897_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_049762839.1\|3360151_3361054_+\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|349398
NC_011831.1\|WP_015941443.1\|3340909_3342331_+\|iron-sulfur-cluster-binding-protein	unknown	unknown	gnl\|CDD\|224062
NC_011831.1\|WP_015941450.1\|3351221_3351518_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941459.1\|3363830_3364109_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941453.1\|3355156_3356650_+\|biotin/lipoyl-binding-protein	unknown	unknown	gnl\|CDD\|273776
NC_011831.1\|WP_015941447.1\|3345201_3347376_+\|ATP-dependent-RecD-like-DNA-helicase	unknown	unknown	gnl\|CDD\|273632
NC_011831.1\|WP_049762838.1\|3350216_3350615_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236541
NC_011831.1\|WP_015941449.1\|3350833_3351046_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941455.1\|3357420_3358470_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|378117
NC_011831.1\|WP_015941454.1\|3356721_3357348_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379522
NC_011831.1\|WP_015941457.1\|3362041_3362623_+\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NC_011831.1\|WP_015941452.1\|3354465_3355143_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NC_011831.1\|WP_015941445.1\|3343203_3343899_+\|lactate-utilization-protein	unknown	unknown	gnl\|CDD\|376839
NC_011831.1\|WP_041470614.1\|3342393_3342846_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_011831.1\|WP_015941446.1\|3343974_3344943_+\|D-glycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240626

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015941451.1\|3351876_3354267_+\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	4.16332e-21
NC_011831.1\|WP_015941456.1\|3358550_3359354_-\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	4.99305e-62
NC_011831.1\|WP_049762839.1\|3360151_3361054_+\|CAP-domain-containing-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	3.30278e-26
NC_011831.1\|WP_015941443.1\|3340909_3342331_+\|iron-sulfur-cluster-binding-protein	gnl\|CDD\|224062	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion].	0
NC_011831.1\|WP_015941457.1\|3362041_3362623_+\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	6.84187e-54
NC_011831.1\|WP_015941453.1\|3355156_3356650_+\|biotin/lipoyl-binding-protein	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.22598e-18
NC_011831.1\|WP_015941447.1\|3345201_3347376_+\|ATP-dependent-RecD-like-DNA-helicase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	0
NC_011831.1\|WP_049762838.1\|3350216_3350615_-\|hypothetical-protein	gnl\|CDD\|236541	PRK09496, trkA, Trk system potassium transporter TrkA.	1.14422e-14
NC_011831.1\|WP_015941455.1\|3357420_3358470_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|378117	pfam09084, NMT1, NMT1/THI5 like. This family contains the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine. They are regulated by thiamine. The protein adopts a fold related to the periplasmic binding protein (PBP) family. Both pyridoxal-5'-phosphate (PLP) and an iron atom are bound to the protein suggesting numerous residues of the active site necessary for HMP-P biosynthesis. The yeast protein is a dimer and, although exceptionally using PLP as a substrate, has notable similarities with enzymes dependent on this molecule as a cofactor.	2.18883e-57
NC_011831.1\|WP_015941454.1\|3356721_3357348_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379522	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region. This family comprises the C-terminal domain of transcriptional regulators of the TetR family. It includes the AefR transcriptional regulator from P. syringae. It is found in association with pfam00440.	1.34138e-16
NC_011831.1\|WP_015941452.1\|3354465_3355143_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.60079e-106
NC_011831.1\|WP_015941445.1\|3343203_3343899_+\|lactate-utilization-protein	gnl\|CDD\|376839	pfam02589, LUD_dom, LUD domain. This entry represents a domain found in lactate utilization proteins B (LutB) and C (LutC), as well as several uncharacterized proteins. LutB and LutC are encoded by th conserved LutABC operon in bacteria. They are involved in lactate utilization and is implicated in the oxidative conversion of L-lactate into pyruvate.	1.77642e-40
NC_011831.1\|WP_041470614.1\|3342393_3342846_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.58864e-18
NC_011831.1\|WP_015941446.1\|3343974_3344943_+\|D-glycerate-dehydrogenase	gnl\|CDD\|240626	cd05301, GDH, D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH). D-glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase, HPR) catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. In humans, HPR deficiency causes primary hyperoxaluria type 2, characterized by over-excretion of L-glycerate and oxalate in the urine, possibly due to an imbalance in competition with L-lactate dehydrogenase, another formate dehydrogenase (FDH)-like enzyme. GDH, like FDH and other members of the D-specific hydroxyacid dehydrogenase family that also includes L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase, typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form, despite often low sequence identity. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	8.62323e-174

>NC_011831.1|WP_015941451.1|3351876_3354267_+|FtsX-like-permease-family-protein
MLTPRWRKVIRDLRVFPTRTALVTLSIAVGVFAFGVILTARAVIGRELQRSFEAINPVSAIITTTTFDTDLAETVERLPEVAVAEGRRVVPARIRIGPDRWEDALITLLPDDGIRRIGIVRPQVGAWPPRERAILVERASLARAGLAIGETVVVELPGIGERAMPVAGTIHDLSTPLAVLTAQTFIYMTEDTLRWLGGPTGYNQLHLIVNGDRRDVTKIRAMASVVEQLLERSGHPVIQTYVPPPMQHPAEALLPVITVLMFIVGVLALVASSFLSINTISAILNQQTRQLGIMAAIGAGPKTLATMYMATAALFGLLALVLAVPAGLLASQGLAGFLAGQLNIDLPWPVWSGEILLLQIVAGITVPVLTALWPIRSALRRPVRELLSGETAPPPPPVVITLLTRILGRFLRRPTLLALRNAFRQRARLLRTLLALALGGSVLITVMTQRTSLFATLEASLAGLNYDLEVQLAHSYRIERIAPLIASLPAVTRIESTLRAPAFPVRPDGTDGEELALRALPADTDFFHPRLAEGRWLAGPGVREVVFSTNIRSKEPYLRIGDWVTLSIEGCESQWRLVGLIEVFTPPTMPAQAYVDISAFTDEQGGVGRTDTVRVATIGHDPASHAAAAAAIEQQLTAYGIDLRLIRTMSEERRILEERFNLATGAISIMALIIGTVGALGLTGTLSINVLERTREIGILRAIGASDDAIRELVVTEGLTIALLAWVGGVILSIPMSYALAYNFGMALLNIPLIWVYSFPAIWMWLGVVILFALVSSVLPARAATRIAVREALAYE
>NC_011831.1|WP_015941450.1|3351221_3351518_+|hypothetical-protein
MYVQHMNEAGRALLAALETKDPNAIQASAKQFAQAVEAAWQAYLRGEVATQTRGQALPRTMHQFATVELPAKAADPQAWPAIARETRIFLNMLGVVAG
>NC_011831.1|WP_015941449.1|3350833_3351046_+|hypothetical-protein
MMQAIEFQATVKNGLIELPPQYAQLTGQVRVIVLVEPTMQTRGNVIDQLLAQPVRIPNVRPLSRAEIYAR
>NC_011831.1|WP_049762838.1|3350216_3350615_-|hypothetical-protein
MPRVIARVNQKNAWLYTSTFGVDVALNQAELLASLIIAEMSLGEITTLLKLCKGLYSLVEEKVDLTSIANGEAIRDLPLPPRCVLAAIIRKGELIIPRGNTILHPADEVLAVIHSTELAQLAAILRPAPHHS
>NC_011831.1|WP_015941448.1|3347933_3350030_+|hypothetical-protein
MSRSVREYLQHALIAAGGSLVVIGLLIVMNSGLTEWVLSLVAVWKGKPPAPHWLVKIHAIGIEALVSGIALVALGWVALPRWNWLAALAQQDSVVLTVALLAIGGLWLPVALIGHSAVIGGERYWWLDDDAMISMRYARHLAQGAGLVWNLDGERVEGYTNLLWTLYMALVHLLPIPVAQTSLIILLTNITLAVATVPIIIRFVRALGGSPLVVAATVLGFVLNKNVMAWTTSGFETTLLMWLFLLAAYRIITEAQQRMPRLFTFVIIALLSLVRSDAVILSVLLYALAVWLNSNRMLIIGYAALSLALPIAHVLFRALYYGDVLPNTAYLKVFGWEGALLAGFRYFAAFAMHYPFALGFALIGSLLTKDKVRRALLAVVLAYVAYVIYVGGDAFPNFRFFIPILPLILALAFLGVQSLIRTVWTTPVQGEQLFAPRTILLAVGLSVVVSGVTMAALAPMIDLLVARAQSGSAINQWFVFIIGVSALAGSVAAFFGRNALQRMLLQPAVAFRLWFGLLCLIGTPLLVPGYSWFLLPYEADVGNVTIGLLLKRNTPPTSKVADFWAGSVFYFSERYAIDLLGKSDRHIARLPAASSGTMPGHNKFDFDYSLGVLQPDFVVANYALPVNEAMLRQLATGDVAFTGQLYFNRVFQQHCLPYPIPINTWRTIFVCDWSEQISERHDWDACSITTAGNCAAER
>NC_011831.1|WP_015941447.1|3345201_3347376_+|ATP-dependent-RecD-like-DNA-helicase
MPQLDGILERITFQSESDGYTVARLRPTGKHSTITIVGKLLGVRPGEHLILEGEWRDHPIHGRQFSVQSYRSYLPATIDGIRRYLGSGLIKGVGPAMAKRITETFGKYTLDVLDREPERLSEVPGLGRKKAALIAAAWREQQRIKDLMILLQDFGLPTGIAVRIYKHYGDDALSIVQHEPYRLADEVDGVGFRTADTIAVGLGIARDDPRRIAAGLRYALGQASNAGHCYLPRLELIERAAALLTVSQAQVVAVLDTLLANNLLWRDTVVTATDPDLQPIYLPPLAFAEIGVANAIRRFLAQRTALAERYASSRWEKVFAHLAERRGLLLSPQQQQAVRTALTTPVMLLTGGPGTGKTTSLRALVILLLARGYRPLLAAPTGRAARRLSEATGVEARTIHRLLEYGADGSFRRNAEYPLECDLLVIDEASMLDVVLANQLLKAVQPDTHLLIVGDADQLPSVGPGRVLGDLIDSGIVPRIHLDAIFRQAAGSGIATNARRINDGLLPDWGGHDDFYFFAAETPERCAELVVELVVERIPRRFGYDPRRDIQVLSPTHKGVAGVAALNTALQAALNPPRPGVAEYHRGDTIFRVGDRVIQQRNDYERDVYNGDTGEVIAIDATAPTVVVRFEDGRAIRYSSLDLDDLTLAYALSVHKSQGSEYPVVVLPLLLQHQPLLQRNLLYTAVTRARQLVVIVGDRRAVAAAVAAAEVERRYTGLSVRLRE
>NC_011831.1|WP_015941446.1|3343974_3344943_+|D-glycerate-dehydrogenase
MKIKPPIFVTRRLPDPAMAILAEHCTVSWWDQVEMPIPRDELLRGVAAAEGLLCLITDRIDAEVIAAAPRLCAVSIMAVGYDNIDRAALAARGITLTNTPDVLTETTADLAWALLLAAARRVVEGHKLIERGEWGPWHPLQMVGQDIYGRVLGVVGAGRIGQAVLRRGRGFGMRLIYHNRRPNPILAAELGAEYRPLNDLLAESDAVVVTAPLTDETRGMFGSAQFALMKPASIFVNVARGPLVREDELVAALRAGRPWAAGLDVFDREPIGPDHPLLALPNVVLTPHIGSASVATRVRMATLAAENLVAVLSGRATPHIVK
>NC_011831.1|WP_015941445.1|3343203_3343899_+|lactate-utilization-protein
MSREQILANLRTSLNANRPWLLAEAERMPHEPPPFVLPAQDDLVGQFIDELTRLEGKAYRVGSADAALAIVDRLIEETQATSVIGWDLDQIGLPGLPELLTARGVKLAVADVRGEGRKNRFQELEPIPVCLSGAELVIAESGTLLLRHGPGRPRIASLLAPCHIAVVFRHQVVRGLGEALALLAQRYGDDIFGSTSNLTFITGPSRTADIEMTLSLGIHGPPQIHVIVVEN
>NC_011831.1|WP_041470614.1|3342393_3342846_+|GNAT-family-N-acetyltransferase
MRITIHAERPDTAEALALIEELEAELAPLYPPESQHGYSVEKLIAQGVAFFVVRVNGEAAGCGGIQLYPNYGELKRMYVRPAFRGMGLAQRLIDHLAAYALARGCRLLRLETGTLQHAAIRCYEKAGFYQIGPFGEYPNDPLSLFYERRL
>NC_011831.1|WP_015941443.1|3340909_3342331_+|iron-sulfur-cluster-binding-protein
MPQTITFYDRVDHALHDDSLQTALHRATTRFIGNRAGAIGALCDPDRLRDQARAIRAYALAHLDELLPQLAANVEARGGHVCWASDGEEARRYIVELARARGVRSIVKSKSMASEEIHLNKALEYAGFEVVETDLGEYIIQLAGETPSHITAPAIHKTREQVSELFQQHLGMPPTTEVPSMIRTARQALRQRFLQADMGISGVNFGVADSGAIVIVENEGNARLSTTVPRIHVAIMGIERIVARLADLGVMLQVLARSATGQKLSVYTSLISGPARPGEEDGPEEFHLVLLDNGRSRILGGQYAESLLCIRCGACLNACPVYQAIGGHAYGGVYSGPIGAILTPLLQPDLPDAYLLPQASSLCGACQEVCPVRIAIPDMLLRHRADAVKAGKVNPVEKAAITGYTMTMTHPAIYDTAGKVGRFFSRILARKGRFRRLPPPLHLWTKERDFPALPPKSFRELWAERKKQRQSSS
>NC_011831.1|WP_015941452.1|3354465_3355143_+|ABC-transporter-ATP-binding-protein
MNQPLILLSSVTKAYATAAGDYLALRGIDLRIEPGEFVAIVGKSGSGKSTLLNVITGIDRASSGEVLVAGADLMRMPAAQMAAWRGRTVGIVFQFFQLLPTLTALENVMLPMDFANLGTPRERRARALALLERVGLADQAEKLPLALSGGQQQRVAIARALANNPPLLVADEPTGNLDSQTAEAVFELFVELAGLGTTIVMVTHDSELARRAGRMVLVADGQIVG
>NC_011831.1|WP_015941453.1|3355156_3356650_+|biotin/lipoyl-binding-protein
MRKLIIPLIAVILILGGAYAIFGPNGPGAQSAPPPIPTGDTVVPPVSVEGRVVPLQYAWLRFERSGMVSAILVAEGDQVAAGQALAQLDDRAQRLAVQQAEANLARAQARYAQLLAGAAPETRAAAEAAVQVAAAQATQVALSVAAPDEKAALAQLAEAKAARAELLAGADPEVVAQAQAARDQAAANLAAQRSALAAAKVNAQLAVEQAANVLRDRQADYSRIHWENEELKQRLGEDELPQARIDLEAAALHAVQNAEVALAQARINAEQAVQAEIEGIAAAEARLREAEARLAALLSPPAADKLAAIDARIAAAEATLARLRGDPRQAQVAVAQAQVALAQAQAAQVNAAPREEEVALAQAEVAAAEAALAQARLELDKLTLRAPFAGTVARLELRLGELATPTAPALLLGDLSVWRIETIDLNEIDAARIAPGAAVTVTFDALPGVALPGRVIAIEPYGTDRLGEVVYTATIELTQTDQRLHWNMTAVITFNGS
>NC_011831.1|WP_015941454.1|3356721_3357348_+|TetR/AcrR-family-transcriptional-regulator
MPRDETEQRRQQIIDGALDAFARLGFDRATNRDIARAAGIASPGLIYHYFKDKTDLLYQVIRERMPLVPIVDAVEQLGDEPPDVVLPRLGERLAQAIDQPLTVAIGKIVIGEVLRHPQLARVINEIGPGRAMNALAAYLARQMELGRLRRTDPQIAARLLIGPILTYFFSREVLDQPEAHAIAAHAMVAEAIAHFLRSMMVEESRTGA
>NC_011831.1|WP_015941455.1|3357420_3358470_-|ABC-transporter-substrate-binding-protein
MKLRFMLFLTLIIFIITACSAPAPAPTAAPTTAPAANPQPELRTVTLAMSYIPNIQFAPYYVAAAKGYYAAEGIEVNFDYNFENDVLQRAATWPASGVAFATTSGTSVLLARQQGVPVKTVMTLYQRFPIAFFAKANVPLASVNDLRGQTIGIPGRFGESFYALLAALYAGGMTEADVTVQEIGFTQAAAVMEDKVPVAIGYAMNEPVQLREQGVEVNVLLAADVFNLAANGIAVSEALIAQEPELVRKFVRASLRGLADTLANPAEAFDLSLQFIPEAQLGNLDLQRKVLAESLPFWQNELTAQHGLGYTDGQLWARTEQFMREAGLLAGPVEVEKAYTNEFVPGGSY
>NC_011831.1|WP_015941456.1|3358550_3359354_-|ABC-transporter-permease
MQQTLPMTTITSRAKPLRRLEWSALGLPVTLLALLTLWQAGVTISGYPAFILPSPALVATRFGQALSSGLLWQHTAATLSAALGGFALALLVALVLGYILAHIRWLEQALAPVLAASQAIPVVAVAPLIILWFGAGLTSKILVAALITFLPILINTIVAIRSIPRELIEMAHISGANRRQLLRYVEVPLALPVLFGGVRTGLALATTGAVVGEFVAGRTGLGALINIARGLFDTPLIFVALTTLALITLTLYVLAGLLERLLVRWEA
>NC_011831.1|WP_049762839.1|3360151_3361054_+|CAP-domain-containing-protein
MRKRFFTHWISLFVLGCLTIAPVLAFDPTTQTPSLLLDEAYTVYYGNVARLSQAGQPPLRWNRQLTHAARWFAWDSVENRPTPYCGHQDTNNEWPDARALHFGYRGSSGAENAYCGYMQPQAAINGWLNSPGHRANLLSPDHREIGLGYYRRARDGRGYIAQMFGSDAAYAPAIIEYEAVATLNPDVSLYIYQVTETGGFIGRRPATAMMIADNPCFVNANWQPFTNETRFRLADGEGWRTVYVKTRDAYGATAVVSDTIYLGANVPVTELAATMSDRQETVTLTGLYHPTLPYMQFSLG
>NC_011831.1|WP_049762840.1|3361180_3361897_+|hypothetical-protein
MYDYNPVALKDLPLVAYVRLKVADNSSPDVVARFSIDGGGEVYGPVVLRGVDFAAANQYQEFALPFTYKGNSPFLIFQFWRTGTTEVFIDAVTIFTAPQPIADTVTLTIPGGNYRGQGVWVRYTDGTTFTPFREVMTVPVQPASIVALAQVAAGPPMPLIVTSPCVRANWQVVQTEPWLNGVAEDGIMRLGINHNGLTAGTYNGAITFAAPNEMQVTIPVQLRVVEQLFVTYTPLVLR
>NC_011831.1|WP_015941457.1|3362041_3362623_+|SCO-family-protein
MYRLILLLLVLLGACAVTGPSSTTTPTKIDRPTVLSDFTLPASTGGELSLSDLRGQPVLLYFGYTRCPDYCPITLGEFRRVRDELGPNGMRVHFVLISVDPANDTPDVLAAYLRGFGEGFIGLQGDDATLRRISKEYGLTYRHGGGHHGNSGVDHSTASYLIDQKGRLRVVYQYGTAASVYVNDIRALLSEQP
>NC_011831.1|WP_085953551.1|3362907_3363558_+|glucosaminidase-domain-containing-protein
MIRTQEPAATTIYLPFITRSPLPGTLLGPPTGTAEAAIAWLAPRSTAYTPYDVGVIINGYAEIGAAAELDWFLAIAQCAHETGNLTSWWCQRPRRNPAGIGVTGAIVEAPPDQPPGPDWAWDESIQRWRAGLSFASWLDESIPAHLGRLLAYALPAGAGTPYQQQLITYALLRRPLPDHLRGVAVTITDLNGHWAYPGTEYGQRILDLAERMRNAG
>NC_011831.1|WP_015941459.1|3363830_3364109_+|hypothetical-protein
MHSDMIGKIEKARRYAAEPERIKFSDLRATFHGGNSDHIISLHDGHWSCDCSFFKMWSTCAHVMAMQRILHPMLTEEARYADMAVPQPDLSS

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Crispr_ID: NC_011831_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_29

3588879-3588987

Orphan

Consensus_repeat	Method
TCTTGATGATCTTTCGACAACTGACCGGTTGTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_29

>merge|NC_011831|29|3588879-3588987|CRISPRCasFinder
TCTTGATGATCTTTCGACAACTGACCGGTTGTAATAGAGAACTTTTTAGTAGAGGCTCAAAACGGCGTTTCAGGTTTCTTGATGATCTTTCGACAACCGACCGGTTGTA

>NC_011831|29|25|3588879-3588987|CRISPRCasFinder
TCTTGATGATCTTTCGACAACTGACCGGTTGTA	ATAGAGAACTTTTTAGTAGAGGCTCAAAACGGCGTTTCAGGTT
TCTTGATGATCTTTCGACAACCGACCGGTTGTA

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015941649.1\|3596722_3597307_+\|response-regulator	unknown	unknown	gnl\|CDD\|226230
NC_011831.1\|WP_015941650.1\|3598027_3598447_+\|chorismate-mutase	unknown	unknown	gnl\|CDD\|377905
NC_011831.1\|WP_015941634.1\|3581572_3582505_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NC_011831.1\|WP_015941636.1\|3583952_3585062_+\|calcium/sodium-antiporter	unknown	unknown	gnl\|CDD\|273039
NC_011831.1\|WP_015941631.1\|3578229_3579579_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223239
NC_011831.1\|WP_015941630.1\|3577426_3578071_-\|CoA-pyrophosphatase	unknown	unknown	gnl\|CDD\|239518
NC_011831.1\|WP_015941638.1\|3585711_3588084_+\|DUF4040-domain-containing-protein	unknown	unknown	gnl\|CDD\|237156
NC_011831.1\|WP_041471094.1\|3588070_3588565_+\|Na+/H+-antiporter-subunit-B	unknown	unknown	gnl\|CDD\|237122
NC_011831.1\|WP_015941633.1\|3580540_3581380_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NC_011831.1\|WP_015941651.1\|3598635_3599649_+\|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl\|CDD\|181535
NC_011831.1\|WP_015941644.1\|3591352_3591706_+\|monovalent-cation/H(+)-antiporter-subunit-G	unknown	unknown	gnl\|CDD\|237169
NC_011831.1\|WP_015941642.1\|3590568_3591081_+\|Na+/H+-antiporter-subunit-E	unknown	unknown	gnl\|CDD\|237159
NC_011831.1\|WP_015941645.1\|3591722_3592016_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941637.1\|3585071_3585449_-\|cupredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|379208
NC_011831.1\|WP_015941646.1\|3592278_3593862_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941632.1\|3579635_3580469_-\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|376824
NC_011831.1\|WP_015941635.1\|3582575_3583571_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|274743
NC_011831.1\|WP_015941648.1\|3595816_3596473_-\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NC_011831.1\|WP_015941641.1\|3589042_3590560_+\|NADH-dehydrogenase	unknown	unknown	gnl\|CDD\|237163
NC_011831.1\|WP_015941643.1\|3591089_3591353_+\|cation-transporter	unknown	unknown	gnl\|CDD\|183617

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015941650.1\|3598027_3598447_+\|chorismate-mutase	gnl\|CDD\|377905	pfam07736, CM_1, Chorismate mutase type I. Chorismate mutase EC:5.4.99.5 catalyzes the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine.	5.19497e-66
NC_011831.1\|WP_015941634.1\|3581572_3582505_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.45448e-31
NC_011831.1\|WP_015941636.1\|3583952_3585062_+\|calcium/sodium-antiporter	gnl\|CDD\|273039	TIGR00367, Uncharacterized_membrane_protein_MJ0091, K+-dependent Na+/Ca+ exchanger related-protein. This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General].	6.61117e-78
NC_011831.1\|WP_015941631.1\|3578229_3579579_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|223239	COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism].	0
NC_011831.1\|WP_015941630.1\|3577426_3578071_-\|CoA-pyrophosphatase	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	8.18537e-57
NC_011831.1\|WP_015941638.1\|3585711_3588084_+\|DUF4040-domain-containing-protein	gnl\|CDD\|237156	PRK12647, PRK12647, putative monovalent cation/H+ antiporter subunit A; Reviewed.	0
NC_011831.1\|WP_041471094.1\|3588070_3588565_+\|Na+/H+-antiporter-subunit-B	gnl\|CDD\|237122	PRK12509, PRK12509, Na+/H+ antiporter subunit B.	1.55442e-46
NC_011831.1\|WP_015941633.1\|3580540_3581380_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	1.78775e-171
NC_011831.1\|WP_015941651.1\|3598635_3599649_+\|3-deoxy-7-phosphoheptulonate-synthase	gnl\|CDD\|181535	PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed.	0
NC_011831.1\|WP_015941644.1\|3591352_3591706_+\|monovalent-cation/H(+)-antiporter-subunit-G	gnl\|CDD\|237169	PRK12674, PRK12674, putative monovalent cation/H+ antiporter subunit G; Reviewed.	3.2755e-27
NC_011831.1\|WP_015941642.1\|3590568_3591081_+\|Na+/H+-antiporter-subunit-E	gnl\|CDD\|237159	PRK12651, PRK12651, Na+/H+ antiporter subunit E.	1.93514e-51
NC_011831.1\|WP_015941648.1\|3595816_3596473_-\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	1.85045e-47
NC_011831.1\|WP_015941637.1\|3585071_3585449_-\|cupredoxin-domain-containing-protein	gnl\|CDD\|379208	pfam13473, Cupredoxin_1, Cupredoxin-like domain. The cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel.	1.60117e-23
NC_011831.1\|WP_015941649.1\|3596722_3597307_+\|response-regulator	gnl\|CDD\|226230	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms].	8.84947e-47
NC_011831.1\|WP_015941632.1\|3579635_3580469_-\|pantoate--beta-alanine-ligase	gnl\|CDD\|376824	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (EC:6.3.2.1) catalyzes the formation of pantothenate from pantoate and alanine.	1.01563e-164
NC_011831.1\|WP_015941635.1\|3582575_3583571_-\|TerC-family-protein	gnl\|CDD\|274743	TIGR03718, R_switched_Alx, integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.	1.06574e-157
NC_011831.1\|WP_015941641.1\|3589042_3590560_+\|NADH-dehydrogenase	gnl\|CDD\|237163	PRK12663, PRK12663, Na+/H+ antiporter subunit D.	1.2928e-153
NC_011831.1\|WP_015941643.1\|3591089_3591353_+\|cation-transporter	gnl\|CDD\|183617	PRK12600, PRK12600, Na(+)/H(+) antiporter subunit F1.	1.88524e-15

>NC_011831.1|WP_041471094.1|3588070_3588565_+|Na+/H+-antiporter-subunit-B
MPRDSALYDSLILRTISRLMMPLLMLLSIFMLLRGHNFPGGGFIGGLLAASAIILQMVAFGPKTARRILPINYLMLAAFGVFFSAIWGLPALFSGLPYMQAFWLPEPIPGVGKIGTPVLFDVGVYLTVIGVTTKIALLLVEEPTLFPLPAMKSVPVEAEGEEVA
>NC_011831.1|WP_015941638.1|3585711_3588084_+|DUF4040-domain-containing-protein
MLYPLVLIALVAAPLALIARVSGRERIAWGLALIPLAIFGLTLVQAGPVWSGGQVAERIDWVPALGLQLSFTLDGLSLLFALIISGIGTLIVGYAGHYLAKDSGLGRFLAYLMLFMGAMLGLVLAGNVLTMFVFWELTSVTSYLLIGYKHDYADARRGALHSLLVTGGGGLALLVGLLLLGQATGSYELSDILAAGDRLQAHALYPAAVVLILIGCFTKSAQVPFHFWLPGAMQAPTPASAFLHSATMVKAGVYLMARLSPALGGTALWDVTLAVVGGTTMTFAAIVAMRQFDLKAMLAYTTISMLGALTMQIGLGGKYGAEGVATNILAHALYKSALFMLAGVIDHECGTRDLRRLGGLRSYMPITMVITALALLSFGGIPVMFGFVAKELMLEAALETELGATLSVLAVAAIAVTAVAYLITGWRLFSNTFLGQRSMAAMQQHVTDPVPGMLIGPGVPALLSLLIPLALLGPISGLIGPASSAIYGKALEVELALWHGINPALLVSLGAIVMGAVLARFGEQLANLRGWPVWSRGDMIFDRLIEQTLAGATALTRTLQSGQLRRYILITALTMLVFVGVPFVRFGLDAVRFDFDPQLQFYEILAASLIPIGVIATIRARTRLGAIIAVGVVGAMVSLLFVLFSAPDLALTQLLIEVLSTVFLLLVFSVLPVRFESFSAAWVRRRDAIIATVMGVLMGGLVLAIATNTSFASLAPFFLENSLAKGKGANVVNVILVDFRGFDTMGEITVLFIALLGIYGLLRLRQGKDNVTPERVPTTEPVGEPVDTQR
>NC_011831.1|WP_015941637.1|3585071_3585449_-|cupredoxin-domain-containing-protein
MNTRLRSLTKHIVLITVVLVGGLLLLSACGEPLRERTIEITATEMRFDPDRVEAQTGEQIFIRLRNRGQVAHSFTIELPAGDRTVSADPGVDAILTFRAPAPGEYRFYCRIPGHEAQQGVLVVLP
>NC_011831.1|WP_015941636.1|3583952_3585062_+|calcium/sodium-antiporter
MTGTVLALLIGGLIFLSIGGELLVRGASRLAMLAGISPLVVGLTVVSFGTSSPELAVSIQAGLAGKSDIAVGNVVGSNIFNILFILGACALISPLIVAVQLIRREVPLMIGISLLFAGLALDGVIHWLDGFLLFSLLVIYTIWAIYASRKEGMAAQAEFAQEFGPHTLPEQRTPRVWFVNLGFIVGGLLCLSLGSNWLVDSATALVRAFGVSDVVIGLTIVAAGTSLPEVVASIVATLKRERDIAIGNVIGSNIFNILGILGVAALVTPGGLQVAPAVNTFDLPVMIAVAFATLPIFITGLSINRWEGVLFLGYYIAYTIYLLLSATQHDALPVFSSVMVSFVLPITAVTLAILTFHAIRRRDWQKVQS
>NC_011831.1|WP_015941635.1|3582575_3583571_-|TerC-family-protein
MFDTLWVWIGFNLFVLAMLAIDLGVFHREAHEVSLREAAIWSVVWIALALLFNAGLYVFWDQIMPGSSLSASDAGLAFLTGYLIEKALSVDNIFVFVLIFSYFAVPAKYQHRVLFWGILGALIMRGTMILAGAALIKQFHWIIWIFGAFLIFTGIRMARSQDEQVEPEKNPVVQMFRRFVPISDRYDGQKFLTRQNGVLMATPLLFVLVMVETTDLIFAVDSIPAIFAVTQEPFIVYTSNVFAILGLRALYFILAGVVHLFHYLKLGLSVVLVFVGVKMLLPDLSAALIGISWKIPTGISLGVVATIIAVSIIASLVRARTVTAGEHVTSS
>NC_011831.1|WP_015941634.1|3581572_3582505_+|alpha/beta-hydrolase
MKLHPTMDIPSHLVPYARRVALSHYDIFYYDAGSATAPILLLIHGLGDEADTWRSIIPQLARPYRVIAPDLPGFGRSSGPTKGYSLTFFARTMAEFIGKLGLPSVTLVGHSLGAMIAQRLSIGLPGVVQQQILIGGCLPIKRHFPRLEQWTLLLPGIGELVLAGMQRSQELAFLSLQPFYANLYALPAREQRFLRRRVWARIHHPIQRRATLSALRWLAIDAVFRCHRYLDLVNQCPTPTVLIAGEHDLIVDGEMIEATEVLLEQHALYIHLERCGHMPHQERPDQIVHLIAELVPSPLHDEYQYLHSDS
>NC_011831.1|WP_015941633.1|3580540_3581380_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MRTTIRDIQQMRDRGERIPMVTAYDYTSAQIADRAGIPMILVGDSLGMVVLGHDSTVPVTLDEMIHHTRAVVRGARNALIIGDLPFLTYASPEQAVISAGRMLQEAGAQAVKLEGGVHIAPTIARLVHLGIPVMGHIGFTPQAVNQIGLRVQGRRANEARQLLEDALAVQEAGAFAIVLELVPAELAQAITERLRIPTIGIGAGAGCSGQVQVWHDLLGLYSDFVPRHARRYTDLATVIGEALTQYVHDVRTGTFPGPEHSSRMDPTELAAALGNLEES
>NC_011831.1|WP_015941632.1|3579635_3580469_-|pantoate--beta-alanine-ligase
MQVVHTIAEARRARAAFDELGFVPTMGYLHQGHLALVERARAECPAVAVSIFVNPTQFGPHEDYARYPRDTARDLALLEAAGVDLVFIPTVEEMYPAGFGTYVIQPAADEVLEGAARPGHFRGVATVVCKLFNIIQPTKSYFGQKDAQQTVVVRQMVRDLNIPVEIVIVPTVREPDGLALSSRNVYLTPEQRAAAPVLYRALRAAAERYAAGERSGEVLRAVMREVLSTEPLAKPEYVSVAHPHTLRELDQIGPEGALLSMAVRFDQVRLIDNWLLL
>NC_011831.1|WP_015941631.1|3578229_3579579_+|aspartate-aminotransferase-family-protein
MNELFDPIQADHDYLIHPLAHPTAHQHPKVWVAGRGAIVIDAEGREYIDGLSGLWNVNVGHGRIELAEAACAQMKQLAYYSSYVGSTNLPAIQLAQKLSELFYPSINHFFFTSGGAESTESSFKTARFYWKAVGKPEKVKFISRMKGYHGVTMAAMSATGLPAYWPMFEPRVPGFIHIESPYPYRFVNPTPHLSDGVAAANLLEEAILREGPETVAAFIAEPVQGAGGVIPPQDDYFKRIREICDYYDVLLISDEVITGFGRTGRWFGLEHYGIEPDIAQFAKGITSGYIPLGGIGVSDRIYEVIETVPPEKRWMHAFTYSGHPTACAVALANIAIIEREGLVQRAAEVGDYMLRRLQELYALPHVGNVRGKGMMAGIELVADTATKEPFPPSANVGVRVQKAMTERGLFTRVVGDTICLAPPLVTTYEQIDRIVSIIADAIEATVATT
>NC_011831.1|WP_015941630.1|3577426_3578071_-|CoA-pyrophosphatase
MPWNEDINRIRQALAGPPPSHDELLILRRLDGTPLRPFTPPPDITPRRSAALLLLFPHDNDLYIPLTVRSSRVTTHRGEVSLPGGGIDPDDNGAVGAALREAHEEIGVDPTDIEVLGALTTFYIPPSNNYLTPIVGFHAAGFVPNHDPEEVEHVFTVPLSSLFDPATIREEIWERNGIPMRVPFFALNGYKVWGATALLLSEFVARLRQAGWGR
>NC_011831.1|WP_015941641.1|3589042_3590560_+|NADH-dehydrogenase
MVFHLFVPIVSPLIGAALAVLFHHQRLVARSITITSILINLGYGLWLMSVVPTSGPLVAQASGWLAPFGISLVVDGMSALMVMLAALLMLPTVIYSFYSVDNERERHFYYPLLLLLLLGVSGAFLTGDLFNLYVWFEVLLVASFGLITLGGSRDQLEGGLKYVVLNLLGSTSFLFGCGLTYGFAGTLNMAHIAERMATLGNPGLQTVLAGIFLFAFGSKAAIVPLFFWLPSSYHTPPVAVTAIFSGLMTKVGVYSLYRVFGLLFQNELAIYGPWIILLAGLTMVIGVLGAVAQMNVRRILSFHIISQIGYSVMGLGLASAAGLAAGLVFTAHVMIVKMALFFIGGAAEQINGTGDLKKMGGLARREPWLGLFWFLGILSLAGIPPLSGFIGKLILLQVGVSQQEYLITAVAAGTSILTFFSMLKIWNEVFWKKSYEDVNRLPRVRFGLLAPGAALVILSVALGLLAGPFVEYNTIAGQQAFDRATYITAVCGADGCEAVYRAAVK
>NC_011831.1|WP_015941642.1|3590568_3591081_+|Na+/H+-antiporter-subunit-E
MIVLVLILTLTWMALQSSFTLPDLIVGFIVSYGLVTLASRFLSTPFTNGGLGRSRIDNRNYVRLTLKWIAFIGFALWSILKANIDMARIVLFRRVDDIKPGIIAIPLDVKSDAGITVLANLITLTPGTVSLDVSTDRRTIYIHCIDVQDADAVRDDIKQNFERRVMELLP
>NC_011831.1|WP_015941643.1|3591089_3591353_+|cation-transporter
MFNMLIAILMGIVAISMVLCTARLLMGPSIPDRAMAFDTLMVHVVALVALYVVITDQLALVDAILVVAVLGFLSTVAIARYIEEGRS
>NC_011831.1|WP_015941644.1|3591352_3591706_+|monovalent-cation/H(+)-antiporter-subunit-G
MDLKEILTLVLATIGVVFMLLAAIGMLKLPDLYTRVHATGKAGTLGVTGVLLSVAVHHGNLVTAAKMIALIAFFLLTAPVAAHMLDRAAYLTGVRRAPQTVQDDLAGKYDMEQGRLR
>NC_011831.1|WP_015941645.1|3591722_3592016_-|hypothetical-protein
MTPAEQRLREQLEEQLRLNEWLYEQLERQRAMNAELRRAVADLARAFQESLAAAVAAGEAGDIDAIRRLTRANQQHWQHYLQQIVAAAQRGSSADNR
>NC_011831.1|WP_015941646.1|3592278_3593862_+|hypothetical-protein
MAKPKRHWLAATHDLPLAAALIWYGSVSCVVLILIGAVCLNSVAYVRNFIDDTAYHIPMAVEIARHANPYYVDVKATFTSFWFPAGAEALVGLFVAVTRDINSTNLSGALFYILFLVVSYQFAGIWTAARHIRLLSVALCAVIPVLFAQTVAFYVDIHINFLVYLSLYLLTLGLVQRQVDYAWYGIGAAILSASVKYHGLFFGAVLILAAIVVMVAIRSYKPSARTLLVVVGSSLFTSGWYLRNLWLKGNPLYPLALPQPLPAILTSLGLPYQGIPFPNLSPQAVWPHPLIPQSPIVYNLIPHITNDAFGLMFPISLLVMGIVALRSHRMPVLQRRAYWFVLAVSVAIVAVLPFHLSVPRYVLFLPAVAALWPAMLAATNPGSYRLSLYSYAGVMAISIIYIAANIVGVGNYRTITQEAISILQEQRRSDIVSFDIFEKGNLRIGYLSGRMTFIATLYDRRLTNQLIQLHYQDYLLDQGPDFTNPADFVAYVRSLDLDYIVIFDLAAPGADSLLEHFSDITIVEDRY
>NC_011831.1|WP_015941648.1|3595816_3596473_-|O-methyltransferase
MRYDITNIAIEDYLHDLMPPRDEVLASLETRAKQQGLSLVGPVQGQFLYLQALMMNARNALEVGITTGYAAIYIMKALRQTGGKMTAIERNPERVKLATEVISAAGMSDLITIHQGEWYELLPSLNEQFDLIFLDVLRSSSNDMQATQALELCVPLLQPGGVLIADNVLCSAQVLEEDVSPLVRGIQRFNRAIMEHPQLESVIIPLRDGVSISRKKLS
>NC_011831.1|WP_015941649.1|3596722_3597307_+|response-regulator
MAAIRILIAEDNDLVSLTLEEQLKGLGYEVVGIARTGAEAVMLASRLKPDLVIMDIRMPEMDGTEATSRIRDQTGIPVVMLTAFADKETIRRAEAAGALAYLVKPVNEQELPPAITIALARHREMQSLRNENLELQEALEARKLIERAKGILMQRLGLTERDAYERLRQRARDKRTKMKDIAQAIIEAEELLGS
>NC_011831.1|WP_015941650.1|3598027_3598447_+|chorismate-mutase
MDVRCRGVRGATTCEANTREAILAATHELLTLLIEANDIKPEDIASAIFTTTPDLNAEFPAVAARAIGWVDTALLCGHEMAVPGSLPRCIRVLIHWNTTRRADEIVHVYIRGARGLRPERAALMSAFRMVTSTLPEEEQ
>NC_011831.1|WP_015941651.1|3598635_3599649_+|3-deoxy-7-phosphoheptulonate-synthase
MIVVMQTNSTQSQIDAVLERLREYNLRGHLTVGEERTVIAVVGASIPPTLREELEHFAGVKETLRITQPYKLVSREVKPTDTIVQVGDVKVGGGHLAIIAGPCSVESEEQIMATARAVREAGANMLRGGAFKPRTSPYSFRGLGEVGLQLLAQARGETGLPIVTEVMTPADVELVARYADALQIGARNMQNYQLLEEVGRSGKPVLLKRGLSATIEEWLLSAEYIIAQGNPNIILCERGIRTFETATRNTLDLNAVAVVKRRSHLPVIVDPSHGTGKWYLVPPLTLAAIATGADGVIIEVHPDPDRAKSDGGQSLSPENFMNLMPKLRAVAQVVGRR

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Crispr_ID: NC_011831_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_30

3623032-3623139

Orphan

Consensus_repeat	Method
GGGATGGGTCATCGCACCCGTCCCTTTTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_30

>merge|NC_011831|30|3623032-3623139|CRISPRCasFinder
GGGATGGGTCATCGCACCCGTCCCTTTTTTTGCTGACAATTTTTGTTTTAGGGTTGGTCGGGCGGAACTTCTGTCTCGGGATGGGTCATCGCACCTGTCCCTTTTTTT

>NC_011831|30|26|3623032-3623139|CRISPRCasFinder
GGGATGGGTCATCGCACCCGTCCCTTTTTTT	GCTGACAATTTTTGTTTTAGGGTTGGTCGGGCGGAACTTCTGTCTC
GGGATGGGTCATCGCACCTGTCCCTTTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015941667.1\|3614182_3617278_-\|SMC-family-ATPase	unknown	unknown	gnl\|CDD\|223496
NC_011831.1\|WP_015941680.1\|3634792_3635887_-\|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|185037
NC_011831.1\|WP_049762909.1\|3627128_3628334_-\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NC_011831.1\|WP_015941662.1\|3610290_3611070_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941665.1\|3613044_3613875_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|224327
NC_011831.1\|WP_015941683.1\|3638880_3639369_-\|cytochrome-c-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|259980
NC_011831.1\|WP_015941682.1\|3637113_3638793_-\|b(o/a)3-type-cytochrome-c-oxidase-subunit-1	unknown	unknown	gnl\|CDD\|238830
NC_011831.1\|WP_015941663.1\|3611070_3611889_-\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NC_011831.1\|WP_085953555.1\|3612077_3612938_+\|GlcNAc-PI-de-N-acetylase	unknown	unknown	gnl\|CDD\|274584
NC_011831.1\|WP_015941671.1\|3619790_3621032_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|366721
NC_011831.1\|WP_015941668.1\|3617320_3617818_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941681.1\|3635902_3636919_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NC_011831.1\|WP_015941672.1\|3621133_3623014_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NC_011831.1\|WP_015941679.1\|3633966_3634722_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NC_011831.1\|WP_015941676.1\|3629677_3629920_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283747
NC_011831.1\|WP_015941670.1\|3618828_3619755_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NC_011831.1\|WP_015941675.1\|3628476_3629673_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NC_011831.1\|WP_041470626.1\|3618062_3618824_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NC_011831.1\|WP_015941677.1\|3630069_3630759_+\|phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|224837
NC_011831.1\|WP_015941678.1\|3630755_3633797_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015941667.1\|3614182_3617278_-\|SMC-family-ATPase	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	2.59767e-82
NC_011831.1\|WP_015941680.1\|3634792_3635887_-\|dipeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|185037	PRK15079, PRK15079, oligopeptide ABC transporter ATP-binding protein OppF; Provisional.	4.12221e-160
NC_011831.1\|WP_049762909.1\|3627128_3628334_-\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.42169e-50
NC_011831.1\|WP_015941665.1\|3613044_3613875_-\|metallophosphoesterase	gnl\|CDD\|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	5.59039e-23
NC_011831.1\|WP_015941683.1\|3638880_3639369_-\|cytochrome-c-oxidase-subunit-II	gnl\|CDD\|259980	cd13913, ba3_CcO_II_C, C-terminal cupredoxin domain of Ba3-like heme-copper oxidase subunit II. The ba3 family of heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and some archaea, which catalyze the reduction of O2 and simultaneously pump protons across the membrane. It has been proposed that archaea acquired heme-copper oxidases through gene transfer from gram-positive bacteria. The ba3 family contains oxidases that lack the conserved residues that form the D- and K-pathways in CcO and ubiquinol oxidase. Instead, they contain a potential alternative K-pathway. Additional proton channels have been proposed for this family of oxidases but none have been identified definitively.	5.3238e-60
NC_011831.1\|WP_015941682.1\|3637113_3638793_-\|b(o/a)3-type-cytochrome-c-oxidase-subunit-1	gnl\|CDD\|238830	cd01660, ba3-like_Oxidase_I, ba3-like heme-copper oxidase subunit I. The ba3 family of heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and some archaea which catalyze the reduction of O2 and simultaneously pump protons across the membrane. It has been proposed that Archaea acquired heme-copper oxidases through gene transfer from Gram-positive bacteria. The ba3 family contains oxidases that lack the conserved residues that form the D- and K-pathways in CcO and ubiquinol oxidase. Instead they contain a potential alternative K-pathway. Additional proton channels have been proposed for this family of oxidases but none have been identified definitively. For general information on the heme-copper oxidase superfamily, please see cd00919.	0
NC_011831.1\|WP_015941663.1\|3611070_3611889_-\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	1.22899e-99
NC_011831.1\|WP_085953555.1\|3612077_3612938_+\|GlcNAc-PI-de-N-acetylase	gnl\|CDD\|274584	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase, also called 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species. [Cellular processes, Detoxification].	9.11944e-46
NC_011831.1\|WP_015941671.1\|3619790_3621032_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|366721	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.	2.40228e-61
NC_011831.1\|WP_015941681.1\|3635902_3636919_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	0
NC_011831.1\|WP_015941672.1\|3621133_3623014_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NC_011831.1\|WP_015941679.1\|3633966_3634722_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.5092e-42
NC_011831.1\|WP_015941676.1\|3629677_3629920_-\|hypothetical-protein	gnl\|CDD\|283747	pfam06153, CdAMP_rec, Cyclic-di-AMP receptor. CdAMP is a family of bacterial cyclic-di-AMP receptor proteins. Cyclic-di-AMP (c-di-AMP) is a bacterial secondary messenger involved in various processes, including sensing of DNA-integrity, cell wall metabolism and potassium transport. CdAMP_rec has a ferredoxin-like fold and is structurally related to Pii-signal transduction proteins.	2.36342e-21
NC_011831.1\|WP_015941670.1\|3618828_3619755_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.15104e-39
NC_011831.1\|WP_015941675.1\|3628476_3629673_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	4.29662e-50
NC_011831.1\|WP_041470626.1\|3618062_3618824_+\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	5.76738e-75
NC_011831.1\|WP_015941677.1\|3630069_3630759_+\|phosphoribosyltransferase	gnl\|CDD\|224837	COG1926, COG1926, Predicted phosphoribosyltransferases [General function prediction only].	2.05205e-78
NC_011831.1\|WP_015941678.1\|3630755_3633797_+\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	1.67763e-30

>NC_011831.1|WP_015941672.1|3621133_3623014_+|molecular-chaperone-DnaK
MGKIVGIDLGTTNSCIAVMEGGDVVVIPNAEGNRTTPSVVAFTKNGERLVGLTAKRQATINPENTLYSVKRFIGRSFDEVTEERERVPFKVVKGPRNDVRIYVPQTGKEYAPQEISAMVLQKLKADAEAFLGEPVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKKDETILVFDLGGGTFDVSILEVGDGVIEVKATSGDTHLGGDDYDAAIVNWIIDEFRKDQGIDLSKDRQALQRLKEAAEKAKMELSSMMETEINLPFITADASGPKHLAMKLTRAKFEQLTAHLTERLRDPVLRALKDAGLQPSQIDEVVLVGGSTRMPVVQELVRKMLGKEPNKSVNPDEVVAVGAAIQAAVLGGEVKDVLLLDVTPLSLGVETLGGVMTKLIERNTTIPTRKTEIFSTAADGQTAVDIHILQGEREMAADNISLGRFRLEGIPPAPRGVPQIEVTFDIDANGILNVSARDKATGKEQRITITASTNLSKEEVERMVREAQLHAAEDKARRELVELKNQADSLAYQAEKSLKELGDKVDSIERSRIENLIKDLREAIAKEERSRIQQLSNELQQAVFKISQAAYGDGATPGAGGSSSGRKDDGVVEGEYTVN
>NC_011831.1|WP_015941671.1|3619790_3621032_+|FAD-dependent-oxidoreductase
MYDVIIIGAGIAGLAAAHALHAAGCNVLVVEARQRIGGRIWTDRSYGPVEFGAEFIHGHRAATWELVQRTGLSTSRWGRDRRFALDGQMLTDTDPVVQAVYQLYRQICQYRGPEVSVADLIARLSPSPHVQTLIGRWLANLEGADLTRLSATALSRERRLSTMGEDNFHIDGGYDQLLDPLCAGIAIELGVAVTNVVWSANRVDVILADKRRLQARRVVITVPVSLLQAGQPRFDPPLPADKQAAIHAIPMGHVTKLVLWFDRQFWSSFTVLSTNNTIATWWPVTSAHVPTLMGYTGGQQAVVVSELGEARAITVALEELSTLFQVDAAAYYRNGRLIDWSSDPWSRGAYTYSAATTPAARAVLATPLDPLFFAGEATVTGAEIATVHGAFESGRRVARQILLARQAQIQTYL
>NC_011831.1|WP_015941670.1|3618828_3619755_+|LysR-family-transcriptional-regulator
MLNTVHLQTFLAVVETGSFSAAAKRLHMSQPAVSQQIRALEEQMGGVRLFRRSGQQMVLTLAGEQLLSNARELVAMAERTVQAVSALRGQIGGRVRMGCVTGGAEAFLPYALAIVQRQYPAVTVEVEVQAADRLLEGLGERLFDLVLVNDTPRRRGFETRLLAVERLVLVALSGHPLLPAEQVPAGVLHDYPLALPRVGHPLRRVIEDGLRRRGVNVSDLRIVLEADSPLLLRTAVEAGIALAFLPVSLLPARLERLGIVALAGQPVAQEWHLVRLRERAPAHVVDLMYETLLGEETRSVLLQLGLTT
>NC_011831.1|WP_041470626.1|3618062_3618824_+|TerC-family-protein
METIFSVENLLALITLTVMEIVLGVDNIIFISILAGKLPMEQQRPARQIGLSLALITRLLLLLSISWIASLTQPLFEVGPWHVTGRSLIMLGGGLFLIYKATTEIHEKLEGTEHGEQSVAVTTLQAVVIQIILLDIVFSLDSVITAVGMANELWVMMTAVVIAVGVMLFLAEGIAKFVNDHPTIKMLALSFLLLIGFSLVAEGFELHIPKGYIYFAMGFSVMVEMLNLRVAAKAKARQPVRLHQRYDTTKLGH
>NC_011831.1|WP_015941668.1|3617320_3617818_-|hypothetical-protein
MTWQLVQGSPDLVTVRFIPWLTWSFAALVIYGVTTIGQSIIARGQGITTGELVALVLLLGMMIFTLITGGQFGLCRIDRRRGLLSVTSYGLLGRSYQERPLADVKGLEVRLLRRAQYRLLVALRSGERLPLAPFYLVSFNDRSIRSIAKALGVEPELIQEKRLFR
>NC_011831.1|WP_015941667.1|3614182_3617278_-|SMC-family-ATPase
MIPIQLSLRNFMCYRTDDGKPLRLELDGLHVLCLSGENGAGKSTLLDAITWALWGKARSADDDLITQGETEMMVELVFALDGRTYRVIRQHQRGRSTGKGTSAGKTWLDLQILDGTQWRPIGENTVRETQAKIDALLRMSYRTFINASFLLQGQADKFTSAPAAERKQVLAEILGLDEYAELEQRARERVRILDAETIRVRGQLESLQPTAAKVPFWQEAVVNAEQQRRRLQAAYAELEAEYTVAVNRLRELEALAQRHRELLDRITSLHTDIQRYNRELNELAQRISHDESIIARRSVIQAGLTELTTARAELERLRQVRDQYNTLMMRRTELKQELKTAFYELRERLSRAEQERERLHTAVTRFAELQQQVATLQHRLYELAPAHARMAHLQDQRIAIEQQLSHLKELTYRQTVLKDQLDQRRVALKNEQDRLQQDRQRLDRQLADVARWRVALQEAQMALAALRALEEQQLLHRRREQEIVETLGKARAIAMQAQQAMDKLRANQALLATGSGECPVCRHRLDPAETEHVMAHYAHELAALRHEEARALATAQTAEQALATVRATIADNEQELDKLRRQAAAIETLERQLAQATAWEQERNDIVRRLTALEAKLATDEIDPPLQAELTAVTAQLTQFDHITGLQNDLAMINDELTACERQLREQSRLEGELDSCQRELERLQDASAKLPDVEAVVAELQRQIETNDFAHEIRSAGRQVEAEIAALNYQPELLEMAEAKVRSLAHWEQAERELILAEQRYAGELKLRSQTQTLLAHAERERQTLQAEVDTLANELTKLPLVQTTVTQIKQRLDETARALQIAERDLTEKQTYLRQAEAAAAQLETLQAQERQLCERSALFAELAEAFGKKGVQAMLIETAIPQIEDEANSLLARLTDGQMHLRFEMQRDTKKGDTVETLDVRVADALGTRDYKTFSGGEAMRVNFAIRIALSRLLAHRAGARLETLVIDEGFGTLDADGRERMVEAITAIQQDFARIIVITHIDDLKDRFPATLEIRKTPAGSRWELRG
>NC_011831.1|WP_015941665.1|3613044_3613875_-|metallophosphoesterase
MAFRILHISDVHTGPPFNPAAAERLIADAHTLKPDLVVISGDFVQRADFAAQWRAARILRERLPQPQLVVAGNHDVPLFNLPERLLHPLRRYQQQISPDLNPVFTAPGLAVVGACTAHGWTVDGGKLYPNQMTALRQRLSQFGPDVYKIVVWHHPVALPPTYRRKRVTISNAHEAIRLLDELAVDLLLCGHLHISFVGNTRDFQPDVRHGTYIVQSGTTTSRRGYGPEHGMNTCNLITIEHDGACVQHLRLDQHGDGFRPFAEHWLPRQTVTVTGS
>NC_011831.1|WP_085953555.1|3612077_3612938_+|GlcNAc-PI-de-N-acetylase
MVDTRPTLLAVFAHPDDESFGPGGTLARYAWSGTAVHLICATGGEEGTVDPALLNGYQSVAELRRAELLRAAEALGLSSVTLLGYRDSGMPGTAANAHPDALINQPREQVVEQIVQRIRQLHPQVVITFDPIGGYRHPDHIAIHEATVAAFHAAGDPSAYPSAGPAYAPQKLYYTTFSRRLLRLVVRLMPLFGRDPRAFGRNRDVDLTKLVEVDFPTHARIDTTAVREKVQMAAVAHLSQGGGGPFTRGPLSTIVRLLGSADTFMRAYPPATDDVREDDLFAGVVW
>NC_011831.1|WP_015941663.1|3611070_3611889_-|pyrroline-5-carboxylate-reductase
MLTDLPIAVIGAGAMGEAIIGGLLRNELVTPDQILASHPRDDRRRDLAHRYAIHTTHDNLEAAKWGRVVIFAVKPQQLRRILPPLRGAIRDEDLVISVIAGVTIATFAEALDHQAIVRSMPNTPAQIGAGMTVWTAASAVTEHQRRWAATVLGALGRELYVDNETYLDMATAINGTGPAYVFLMMEAMIDAGVHLGLSRRIAEELVQQTMLGSVQYAMQSGLHPAQLRNAVTSPGGTSAAALSELERGGLRTVLADAIWAAYRRSVELGRQG
>NC_011831.1|WP_015941662.1|3610290_3611070_-|hypothetical-protein
MAVSYARVRLTTEDDRRYRAYVEKFKLQRKNQKAIRPPRQRDIFGGQAEVALRDWLATQVSLDERRILEYEERRNRTAQIKYRELDALAIVDGVAWVFEIKASRTASALRRAVAQLNETRQILHLLFHRVGVTILLVDTGIPADSAAADALMQSDRPPPRRPEPLAEVLTALPQLQIIDTLTARSAGDDQVNLMLFSVDDIIALVGAENLALNWEEDDLYDELDDEPPPATTLFASSGDDDDNDDDNPLAAALRKAGLR
>NC_011831.1|WP_049762909.1|3627128_3628334_-|adenylate/guanylate-cyclase-domain-containing-protein
MLELFGNSIHFALANILLESLIDYQKNYFLSFDPYVLLFSSLIQGYFLTIYSTKSPFYRFLGNLIAPSLYIAIEFSIEGITFWNDLNHRFYPLFGFLIGLTQLLQGFTKRKSIKDLLIIIENIIRTGIIFLMYYIFETQTNPNQTENLTTFFSDTSHQFIGLSLLFFGVAIGLANATSQHYLGLLRDTTTKLKTFSEWLLGRELLNISLIQPELLHQQRQQRTIMFIDIRGFTQWSEAHSPEETVTLLSQYYCAVEDVLDRHRVIKWKISADEVMAIFAQPLEAVRAAAEIQQQITPLLAPEQLGAGIGLHCGQVVEGLLGSDTIKFYDVIGDTVNTTKRIESAAGKGEILISEPLYQYVKTIFASDLSRQLHVKGKAHPLTVYSLTETAPQPAVAVSVSA
>NC_011831.1|WP_015941675.1|3628476_3629673_-|glycosyltransferase-family-4-protein
MRILYLASGIPVPGTLGGSIHTLEVARGLAQRGHDVHVVAASRELPLSYVRLRPMRQLTAQSWNGFTLYHQDIPKALSLLGTAAIIKLTRQLRPDLIMERYYNFAGAGLIAARRLGIPTLLEVNALIVDPPEILKRRIDDALGGPFRRWAEQQCRWASRIVTPLHTTVPAGIPRDKIIELPWGANVETFTPPPTPPPGPPKVIFMGSFRAWHGVSDFVYAARLLIERGHPAHFVLIGDGPERAAAESLAAPYRDRFTFTGAVPHQQIPTLLGQGHLGVAPFNTAPHPALRAAGFFWSPLKIYEYMAAGLPVVTAAIPPLTTIIREGIEGALFREGDVHDLAAAIERVLVNPAAAFAMGQRARARVVAEFSWQRHCAELEHIGESLIKTNSHHILRKIQ
>NC_011831.1|WP_015941676.1|3629677_3629920_-|hypothetical-protein
MKLIVFVVEDSHADAGVDALVTAGFRVTRLATTGGFLRRGNTTLLVGVEDSQVDRAHEIMQRAAPGTLAITMDLERYERL
>NC_011831.1|WP_015941677.1|3630069_3630759_+|phosphoribosyltransferase
MPAPVVSQRFFDRRAAGRALAWALSHYAGRPHLQVLALPRGGVPVAYEVAQALSAPLDVLLVRKLGVPGQVELAMGAIAEQGARVLNHDIIAELNIPPHVIEEVTVLEQAEIERRTRAYRGSNPPPELHDKTVILIDDGLATGATMHAAVTCVRLQHPRWIAVAVPVASKAAVRMLRSVADDVIAVMVVEPFYALSYWYEDFSQTSDDEVRRLLQAGRSLSTPSSPKNA
>NC_011831.1|WP_015941678.1|3630755_3633797_+|AAA-family-ATPase
MITVQLFGSPLVLRNHQPVVLSRRRSRALLYYLAAHTQPVRREQVLTLLWPDHERSSAQQLLRSTLYTVRQVLGEALVADNEQLALKATVDLRTLQAVLADPHATVQMLTSALPTHAVEVLAGFDLPDSEPFQSWLTGVREQARVLVGRGWLRLAHLYEQHGDLAAALHALDVALSIDPLQEDVQRDAMRLAYLNGDRVGAIRRFEQFRDLLDQELGVPPMRETQALYDAIITDTLPGTSAPVRLSAVSLNGVLPFIGRDTELLLLQTEAQPGRLLLIEGVSGIGKTRLAEEFLARCGGLVLSGSARELEQNLPYHPIRTALAAFVARPEWPALHSRLLLAPIWWHELGRLVPDLALPPTTPPDEARLWEAIARFLNELARQRPVYLLIDDLQWADTSTLGLLGYLLRRSTDVALTVIATTRPPEPRSALAHLIRALIREERLVRVVLERLAPAAILTIARQLSPAFAHPLADWLERNAEGNPYIVSELVRHARTAGWLTPNGMVDLSAFSAQSVVPQSVYHLIEARLSRLSGAARRVLDAAVVVGRDFDFAVVTKVAALSEEATLDALDELLAARLVLPLSDGQFRFDHPLTMEVVYRNLGDLRHRMLHRRVGEALEALYRDRIDEVAGQIVLHFIEGGWSERAAGYALRAAERAAALAAWPEAAEFYLKALDGVLPPQRSTVLRKLGYARLYAGAAGLAAEAFREAMGVASTLHEAVVARLALAHALIPQGRYADVIALVSQIDPDIDPRQQAEALFLWGTALSLEGADLGAATERLMMAEAVLRACPTAEAAALAQVSFELGNIAAQQGDLTTAIARYEMAQQIADEAGDSALTWRVLARNNQAYHRLLLGEISAAETIITAALSLAEEGGLLSVMPYLLSTAGEVALAQGDLETAIARFQQGLALATQFSIPERVAGITANLGLVALQRGDTTCAVHYLSTALAQADTLGARHLAAQIRVWLAPLLPPPEARIRLAEAQAIAEAGGRQRLLAAIAQVRAALSDQATVPR
>NC_011831.1|WP_015941679.1|3633966_3634722_+|serine/threonine-protein-kinase
MVQLQVGDTIGHSRIEALIASSMISDVYRAIDSRSGHRCAVRIFRTSFDHVTDLRVLFYHEARIAAALHHPHILRINEIGEWRGHGYIISEYMAEGSLPLWLRRASPSFLTLLDLARQAALALVYAHRFNVVHGDLRPASLLLTNDIRYRSGLRLVVSGFALGRLSSEVLAIGGMTPSRYLAPERREGAAPSPAADVFAFGQILSDLFIATVPDPDIAQLCAACTALDPAARPPAATIALDLALRMHGSRV
>NC_011831.1|WP_015941680.1|3634792_3635887_-|dipeptide-ABC-transporter-ATP-binding-protein
MATQRSDTTLVEVKDLRMHFPVTRGIIFQRRVGTVKAVDGVNFTIKRGETLGLVGESGCGKSTTGRAILQLYRPTGGQVLFEGIDLTKLRGNELRQMRRRVQMIFQDPYASLNPRMTVGDIIAEPIRVHKLREGRAVRERVEELLHLVGLNPAFANRYPHEFSGGQRQRIGIARALAVEPDFVVCDEPVSALDVSIQAQVVNLLEELQDKLGLTYLFIAHDLSVVNHISDRVAVMYLGKVVELAEGSKLYSMPLHPYTQALLSAVPIPDPKIEQQRRRIILEGDVPSPLNPPSGCHFHTRCPIAIQKCREEEPPFVDYGDGHFAACWRARESVTLMPEVARKQAEAVAARIAADAEKVKQISHS
>NC_011831.1|WP_015941681.1|3635902_3636919_-|ABC-transporter-ATP-binding-protein
MAPLLEVRDLRTYFHTQDGIVKAVDGVSFYVNRGETLGIVGESGCGKSVTSLSIMRLIPNPPGKIVGGQILFDGEDLLQVSEEEMRRIRGNRIAMIFQDPMTSLNPVLTIGRQITESLELHLKLSKKEARDRAIELLDMVGIPSPSKRLDNYPHQFSGGMRQRVMIAMALSCNPELLIADEPTTALDVTIQAQILELINRLREELETAVILITHDLGVVAGMTDRVTVMYAGKVVEEGPTAEIFANPRMPYTIGLLRSIPRLDEERGRRLKPIRGLPPNLIDLPPICPFSPRCDYAREECLASVPELRRVGPDHRAACHFDITIETPVPQQTTSDIAA
>NC_011831.1|WP_015941682.1|3637113_3638793_-|b(o/a)3-type-cytochrome-c-oxidase-subunit-1
MASIAARARPVAISTDLSVERKLAGINIFIAFAALAVGGLMGVLQILRYNGLDLYTPAKPILPGGYYQGLTVHGVLNVLVFTTFYIIGFLTYIFTKSLGRPLASSRLAWATLWVMVSGLVLAAIPLLTNNATVMFTFYPPLKADSLFYIGLTLVVAGTWLLLVNMILTRNAWKADNPGQITPLPAFMAIVTMLMWTISTIGVASEMIFLVIPWSLGLVGGTDPVLARTLFWFTGHPIVYFWLLPAYISWYTLVPEQAGGKLFSDPMARVSFILFLILSLPIGMHHQVADPGISEMWKLVHAIFTFGVFFPSLLTFFNVVASLEYAGRRNGGEGWLAWIFNLPWGKPEISAQIVAMMLFAFGGISGLVNASYNVNLVVHNTSWISGHFHLTVGTAVALSFMGITYWLVPHLTGRQLWSRSLGVAQAWLWFVGMGLFSHFMHELGLRGMPRRTDIGGAPYVQDEWRFFLFFAMIGGLIMFVSAIFYYFNMIMTLTRGKKLAEAPDFNFAKTLSGPEDAPKILDRLLVWVTVAAIILIINYLPTILDILNTATFDVPGRRVW
>NC_011831.1|WP_015941683.1|3638880_3639369_-|cytochrome-c-oxidase-subunit-II
MKDKKFISYLFEVAWILPSVAIPVSMMVAILVTAFAVGVRVPTSAGRVSVSAVAAGTDTTFSQPGLREIAPGRYEAIITAQTFMFTPNTIEIPAGSKVTFILTSKDVIHGFKIEGAPINVMVIPGQISRVTATFDKPGEYLVVCHEFCGAGHHVMSGKIIVN

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Crispr_ID: NC_011831_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_31

3742097-3742206

Orphan

Consensus_repeat	Method
GTGGGTATCCGGTGGTGTAGAACAGGTGTTGGTGAG	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NC_011831_31

>merge|NC_011831|31|3742097-3742206|CRISPRCasFinder
GTGGGTATCCGGTGGTGTAGAACAGGTGTTGGTGAGCTCAATACCGTGGCTCCGAAATCGGTTGCCATCGTTGCGTGGGTATCCGGTGGTGTAGAACAGGTGTTGGTGAG

>NC_011831|31|27|3742097-3742206|CRISPRCasFinder
GTGGGTATCCGGTGGTGTAGAACAGGTGTTGGTGAG	CTCAATACCGTGGCTCCGAAATCGGTTGCCATCGTTGC
GTGGGTATCCGGTGGTGTAGAACAGGTGTTGGTGAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015941796.1\|3746191_3746434_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941788.1\|3740430_3740943_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|376377
NC_011831.1\|WP_015941780.1\|3734037_3735804_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NC_011831.1\|WP_015941792.1\|3743358_3743940_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NC_011831.1\|WP_015941779.1\|3733046_3733964_+\|polyprenyl-synthetase	unknown	unknown	gnl\|CDD\|223220
NC_011831.1\|WP_015941793.1\|3744010_3744673_-\|phage-shock-protein-A	unknown	unknown	gnl\|CDD\|274372
NC_011831.1\|WP_015941781.1\|3735942_3736857_+\|response-regulator	unknown	unknown	gnl\|CDD\|333815
NC_011831.1\|WP_015941783.1\|3737299_3737575_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NC_011831.1\|WP_015941795.1\|3745556_3746180_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NC_011831.1\|WP_015941794.1\|3744843_3745560_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NC_011831.1\|WP_015941784.1\|3737587_3737887_+\|50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|376487
NC_011831.1\|WP_085953524.1\|3739253_3740408_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NC_011831.1\|WP_015941799.1\|3748235_3748919_-\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238497
NC_011831.1\|WP_015941791.1\|3742559_3743291_-\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|224527
NC_011831.1\|WP_015941782.1\|3736974_3737286_+\|50S-ribosomal-protein-L21	unknown	unknown	gnl\|CDD\|235510
NC_011831.1\|WP_015941797.1\|3746446_3747349_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941785.1\|3737979_3738960_-\|transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NC_011831.1\|WP_015941786.1\|3738963_3739158_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015941798.1\|3747444_3748083_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373720
NC_011831.1\|WP_015941790.1\|3742368_3742572_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015941788.1\|3740430_3740943_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	2.94543e-89
NC_011831.1\|WP_015941780.1\|3734037_3735804_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NC_011831.1\|WP_015941783.1\|3737299_3737575_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	2.37364e-49
NC_011831.1\|WP_015941779.1\|3733046_3733964_+\|polyprenyl-synthetase	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	2.71972e-28
NC_011831.1\|WP_015941793.1\|3744010_3744673_-\|phage-shock-protein-A	gnl\|CDD\|274372	TIGR02977, phage_shock_protein_A, phage shock protein A. Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects. [Cellular processes, Adaptations to atypical conditions].	3.61077e-36
NC_011831.1\|WP_015941781.1\|3735942_3736857_+\|response-regulator	gnl\|CDD\|333815	pfam00072, Response_reg, Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.	2.51352e-21
NC_011831.1\|WP_015941792.1\|3743358_3743940_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	8.85901e-86
NC_011831.1\|WP_015941795.1\|3745556_3746180_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	8.05821e-81
NC_011831.1\|WP_015941794.1\|3744843_3745560_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	3.4587e-76
NC_011831.1\|WP_015941784.1\|3737587_3737887_+\|50S-ribosomal-protein-L31	gnl\|CDD\|376487	pfam01197, Ribosomal_L31, Ribosomal protein L31.	7.8448e-34
NC_011831.1\|WP_085953524.1\|3739253_3740408_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	2.56341e-162
NC_011831.1\|WP_015941799.1\|3748235_3748919_-\|isochorismatase-family-protein	gnl\|CDD\|238497	cd01015, CSHase, N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia. CSHase is involved in one of the two alternative pathways for creatinine degradation to glycine in microorganisms.This CSHase-containing pathway degrades creatinine via N-methylhydantoin N-carbamoylsarcosine and sarcosine to glycine. Enzymes of this pathway are used in the diagnosis for renal disfunction, for determining creatinine levels in urine and serum.	4.7693e-97
NC_011831.1\|WP_015941791.1\|3742559_3743291_-\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	1.27943e-58
NC_011831.1\|WP_015941782.1\|3736974_3737286_+\|50S-ribosomal-protein-L21	gnl\|CDD\|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	1.38856e-49
NC_011831.1\|WP_015941785.1\|3737979_3738960_-\|transcriptional-regulator	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	4.94157e-46
NC_011831.1\|WP_015941798.1\|3747444_3748083_-\|hypothetical-protein	gnl\|CDD\|373720	pfam15293, NUFIP2, Nuclear fragile X mental retardation-interacting protein 2.	0.00264061

>NC_011831.1|WP_015941788.1|3740430_3740943_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSEHPLVGIIMGSDSDLPTMQGAIDVCREFAIPYEARIVSAHRTPLDMAEYGMTAHQRGIRVIIAGAGGAAHLPGMIAAHSPLPVIGVPVPSKALNGLDSLLSIVQMPAGVPVATVAIGNGRNAGLLAVQILASADPTLLARVQAYKEYLAAESRAKNRIFTDESTQAGA
>NC_011831.1|WP_085953524.1|3739253_3740408_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MVVHWCSMRVGIFGGGQLAQMLVQAAISLGVEIVICERVPDSPAARYTQHTVVGPWEDEAVLAAFARRCDVVTLENEFIDAHLLRRVEELGTPVWPSPATVAVVQDKLWQKERLVVAGLAVPPFRAVDGPDDVLAAAQAFGWPLVLKTRRNGYDGYGNATLRGPADVVPAWERLTRGGSPLLVEAWVPFTRELAVMVARRRDGTTAVYPVVETVQQNHICHVVYAPAAIAPDTAITATELAVAAIQAVDGVGIFGVELFALADGHVLINELAPRPHNSGHYTIEACATSQFEQHLRAVLGWPLGATTMRAPAAVMVNLLGQRNAPINTDAIVAALDVPGAHMHFYGKRDERVGRKMGHVTALGATLRDAEAIARRAAGLVAMPV
>NC_011831.1|WP_015941786.1|3738963_3739158_-|hypothetical-protein
MATSSRANRRRPTQRPNPARRPAARSLEPPDYRREYADVRQDLFWIAVWGGLLTVAMIVASFVI
>NC_011831.1|WP_015941785.1|3737979_3738960_-|transcriptional-regulator
MVDISYRLRSKAARLRNLEHKLYNAPPQGWSVIELAKQCGVNRRTIYRDLEALSAAGVPIWEHNGKYGIDRNTYLATVRLNLHEAVALFFAARLLSHHSDEHNPHIVTALDQLAAGLPDQTIAGHMARLASIVRERPPNPHYVHTLELLTRAWADRQMVRIRYRAPNRPLTERDIAPYFLEVVRTTPGVYVIAYDRLRNDLRTFKLERIEHAQLLDERFDIPAAFDPYERLAQAWEVMHETAVAIHLRFSPAVAPRIRETRWHHSQRLIDNADGSCDLHLTVAGIREILGWVLSWGPDVQVLAPPELRDTVIDYARRLLARYQQDW
>NC_011831.1|WP_015941784.1|3737587_3737887_+|50S-ribosomal-protein-L31
MKPGIHPKYYTDGIVCATCGTVWKIGSTRPNLRVEICANCHPFYTGEQRIVDTAGQVDRFMRRLNVAQERQSELEARRSSRTQPTKKSLLKEIYGEEAE
>NC_011831.1|WP_015941783.1|3737299_3737575_+|50S-ribosomal-protein-L27
MAHKKGVGSSRNGRDSNPKMRGVKRFGGELVRAGNIIVRQCGTKIKPGANVGVGRDWTLYALVDGVVQFSHYSRTQKKVSVIPVAAETTAN
>NC_011831.1|WP_015941782.1|3736974_3737286_+|50S-ribosomal-protein-L21
MYAIIRDRGMQYRVEPGQVLTIDLLKAEPGSQIELGEVLLVGNGEQVKIGSPLVEGAVVRAEVLGEKKGEKIVVFRYRNKTRYRRRTGHRQRYTQIRISEIVA
>NC_011831.1|WP_015941781.1|3735942_3736857_+|response-regulator
MPKRILIVDDDPQIRRLVTLALTDETSYEVSDVSSAEAALLHISRQPVDLLVTDLLMPGMSGIELIQRVRQLDPNTAIVVFTISPEGLSPQLQAELQIDYVLSKPATAEQLRLAATTLLDPIKPVTSRTEPPSAEAATGSRFSQRLAALRSRQSVRPPVTSAVAMRLTPNQSGRGGRSYSEAQLERMRQSLKDLALAPEVQCAILADMSGLVLSHWSRRRDINVTVVAALAAGNTLALAEIGRHLGQQQPGHLVIHEGQDQNIIMASVDDLILLLAIGANASLGWARIATLRACEEMARIARSE
>NC_011831.1|WP_015941780.1|3734037_3735804_+|aspartate--tRNA-ligase
MYRSHTCGELRPAHAGQEVTLAGWVHRRRDHGDLIFIDLRDRYGITQVVFNSANAAAHAVAETVRSEYVLQVRGKVRIRPAEAVNPDIATGEIEVDAFEAQVLNPARTPPIYIAKEAGEDESVRLKYRYLDLRRERMQRNLILRHRVVKFIRDFLDAEGFIEIETPILIKSTPEGARDYLVPSRLHPGKFYALPQSPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQPEFTQLDMEMSFVDQEDVINLIERLFTELCRTVTPHKRLLTPFRRLTYAEAMERYGSDKPDLRYDLELVNLSDVLAETPFQVFRSVLAVGGQVKGIRVPGCGHFSRKQIDELTEVARSGGAKGLAWAVVPTDGGDVRSSFAKNLAPGEFDALAQRMGAQPGDLLLIVADRPVVVAASLDKLRRKLADLLQLADPDTLCFAWVVDFPLVEWNEEEQRWDAVHHPFTSPKDEDLHLLATDPGKVRAKAYDLILNGYEAGGGSIRIHRRDVQQQVFSLLGIGEEKAQAQFGHMLEAFEYGAPPHGGIAPGIDRLVMILADEPTIREVMAFPKTQQAVDLMTNAPSPVDERQLKELHIRIVED
>NC_011831.1|WP_015941779.1|3733046_3733964_+|polyprenyl-synthetase
MTLTVPPELHHDLLLVEHLLHERTRARATVISMVNPHLIANPTDRLRALLVLAVARLGGATGEHVAHAAAAVELIEAATRAHNNLIDEQARRLGRVKNGAWDHGVALMVGDYLFALASGEMALSPDPRIIGLYSHAVMQICEGQLTTVTNLIPHETALATYWQRAEALAGALPAAAAQAGILCSNLPDTFLAPAARLGKHLGLARQLAAEIRDLESQGSFIQSGQAPLALILAAGAAPPDEIQAVFAHPTPEAVAAALPIIRTHGLPLARESLAAQQRAAHQALSELPVGSTTPWLATLIEQSGE
>NC_011831.1|WP_015941790.1|3742368_3742572_-|hypothetical-protein
MDTLTWQADPELCALLRSYYQGEAGRWPTIIACVEQELRARQLPPAPRYVRFRRTNDGYLVEIRPAQ
>NC_011831.1|WP_015941791.1|3742559_3743291_-|TIGR00730-family-Rossman-fold-protein
MPYTSRQTEDERLLRTDPYRQPHDFIHTDTWRVLRIMGEFVEGFENMAGLGPAVSIFGSARIPPDSPIYAAATETARLLAEAGFTIITGGGPGLMEAANKGARAGGGRSVGCTIELPFETGANPFVDLEVRFRYFFVRKIMFVKYAHAFVIFPGGFGTLDELFEALTLIQTGKIHDFPIVLYGSEFWKGMIDWARTTLLANGTIDQADVNRLQVCDDPQQICTLIVESYRQHVARKGGDPWTR
>NC_011831.1|WP_015941792.1|3743358_3743940_+|thymidine-kinase
MTRPSEGGRIEVICGCMYSGKTEELIRRMRQVRIARQSYRIFTPRMDTRYAEGHVASHSGSRLEAITVATMCEILAYARDVQVVAIDELHLFDDDPAEMVRGCQVLADRGARVIVAGLDLNYRAEPFPAMMHLLALAEQVDKLYAICVKCGAYATRSQRLIDGKPAPANAPTIVVGGLDMYEARCRACYEPAL
>NC_011831.1|WP_015941793.1|3744010_3744673_-|phage-shock-protein-A
MSILGRIKDLISANINAMLDKAEDPEKMANEYLRQLTNELYEARTGVAQAMADETRLEQRRIAAEAEAEQWQVKAERALRAGDENLAKAALARKVQAQKLAEQYRAQEKAQEEQVEALQQALIDLETRIAEVKARKELIIAKKNRAQTQEALQRTAASIGRVSALDKLDQLEEKVDDRLARAEAMAKLEGDSLEARFRNLEKETEVDAELAELKRKLGMA
>NC_011831.1|WP_015941794.1|3744843_3745560_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MTGNTERLLIETTTAWGIPLSEHQYAQFQRYLDELIIWNDRFNLTAIRDRSAMIRRHLLDSLYLARDWQTAPANLIDIGSGAGFPALPLKIAYPTLPVTLVEATGKKAEFLRHVIECLELTDVRVLHERIETVGRNLAEREQYEVVTARAVAELRVLVEYALPLLRIGGRLLAPKGRDPTDEIAAAQRALHVLGGEVSACEPVHIPGEEPRSLVIITKIAPTPSRFPRAIGIPARRPL
>NC_011831.1|WP_015941795.1|3745556_3746180_-|nicotinate-nucleotide-adenylyltransferase
MTTIRRLGIYGGTFDPIHFGHLAIVEEARWYCNLDRVLIVPTAVQPLKAGHLAPAHHRLAMVQLACADNPALSPSTIELDRPPPSYTIDTLRICREQYGTDTELYLIIGTDAAAELPAWREPDQIARLAQLVVVKRPGYTLELPGLLAAVPPLHNRITVIDGPQLAISSTDLRRRLATGRPVRYQLPDAVYTYIQHHHLYQTEDRHT
>NC_011831.1|WP_015941796.1|3746191_3746434_-|hypothetical-protein
MRGYRFTTDDRLPASDLQELADELAIQLHYALGERVFLLPRSDVAELIWPYIDDLHPDDQNDVVWLVWHLFQEAYELQEE
>NC_011831.1|WP_015941797.1|3746446_3747349_-|hypothetical-protein
MSSRYLEMVRGQRRRGGWQFTSKSLLAILAFIAMIGSAVYWWGVQSQLTGNWIIAAAYTAILVLAPPSLMSFLIPWSPGGMLLQRINARTWGYVAVMIAALYLVYYSFEIQWTWWASQPVVQSTGLVIQQVLIGIIGFIIIPALLWTPVTSEELVEQIRQAHLVRRYELQTQADIAILRATLLRAQEKALIGFANLTVQEREELAAVMRGLVKGIDATLRDIGESVKTVSGATIPFQSLEDNEDIRQYLDFVAETLTENSLIPRRSSANGQHEAATRHLTQSETEEYYEEDRRTRALRQR
>NC_011831.1|WP_015941798.1|3747444_3748083_-|hypothetical-protein
MRHQYRWILLAGVVVALSGCLSTLPTTVDVNGPLPATLPPLAQTLRATIVPTDFPSAHRIPTPSTSSPTSAAIIVATPAPEPPTPTLLPIPTLTLPTLPLLSNEERWRLQQLDRQVFPELRLYTTKRSELYWYDPVNEQEVLIGVINGEFMAQARFTFRKDNRLALEVPYHLNQSYGLSALSPALVERIHAAGYSDWIETFVYITPDIQPQP
>NC_011831.1|WP_015941799.1|3748235_3748919_-|isochorismatase-family-protein
MTRFEQLTDDYRQHGLAGRVGFGEQPALLVIDFIKAYTTPGSPLYAAPGVPDAVRASQPVLAAARAAGIPVIYTTVAYAADGRDGGIFVQKVPALRQLTHDSPLVAIVDELRPQAGELVIEKKYASAFFGTHLAATLTALRIDTVIMVGCSTSGCIRASAVDGMQHGFRVIVPRECVGDRAPEPHLANLFDIDGKYGDVVSVNDVLAYLHRRSINASSSPINTEVVE

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Crispr_ID: NC_011831_32

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_32

4039859-4039956

Orphan

Consensus_repeat	Method
AACACGGCCCGGCTTGGTGGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_32

>merge|NC_011831|32|4039859-4039956|CRISPRCasFinder
AACACGGCCCGGCTTGGTGGCGGGATTCACAGTGATACCGAGACCCTGACCGTGCGGGCATCGTCCTTTGTGGCAAACACGGCCCGGCTTGGTGGCGG

>NC_011831|32|28|4039859-4039956|CRISPRCasFinder
AACACGGCCCGGCTTGGTGGCGG	GATTCACAGTGATACCGAGACCCTGACCGTGCGGGCATCGTCCTTTGTGGCA
AACACGGCCCGGCTTGGTGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015942029.1\|4049600_4050638_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NC_011831.1\|WP_157044930.1\|4050634_4051855_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NC_011831.1\|WP_083768935.1\|4038137_4039220_+\|CSLREA-domain-containing-protein	unknown	unknown	gnl\|CDD\|275057
NC_011831.1\|WP_015942018.1\|4030294_4033756_-\|helicase	unknown	unknown	gnl\|CDD\|197275
NC_011831.1\|WP_015942026.1\|4043801_4044656_-\|DUF72-domain-containing-protein	unknown	unknown	gnl\|CDD\|376655
NC_011831.1\|WP_041470691.1\|4024317_4024674_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942019.1\|4034125_4036603_+\|DUF4968-domain-containing-protein	unknown	unknown	gnl\|CDD\|376446
NC_011831.1\|WP_083768933.1\|4037224_4037656_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238315
NC_011831.1\|WP_015942024.1\|4041031_4041580_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_049762864.1\|4054190_4054619_-\|DUF1917-domain-containing-protein	unknown	unknown	gnl\|CDD\|370197
NC_011831.1\|WP_015942032.1\|4052981_4054025_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NC_011831.1\|WP_015942027.1\|4044896_4046462_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143442
NC_011831.1\|WP_015942020.1\|4036742_4037273_+\|DUF2892-domain-containing-protein	unknown	unknown	gnl\|CDD\|239245
NC_011831.1\|WP_015942025.1\|4042166_4043762_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236405
NC_011831.1\|WP_157044893.1\|4024894_4025383_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_157044931.1\|4052265_4052985_-\|type-II-restriction-endonuclease	unknown	unknown	gnl\|CDD\|371556
NC_011831.1\|WP_041470688.1\|4023400_4023847_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273915
NC_011831.1\|WP_015942016.1\|4026075_4026669_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224854
NC_011831.1\|WP_015942028.1\|4047496_4048276_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NC_011831.1\|WP_015942017.1\|4026665_4030298_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319645

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015942029.1\|4049600_4050638_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	2.69158e-46
NC_011831.1\|WP_157044930.1\|4050634_4051855_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	3.65044e-06
NC_011831.1\|WP_083768935.1\|4038137_4039220_+\|CSLREA-domain-containing-protein	gnl\|CDD\|275057	TIGR04212, conserved_hypothetical_protein, Acinetobacter rhombotarget A. Members of this protein family are found, so far, exclusively in the genus Acinetobacter. Members average just over 600 amino acids in length, including a 22-amino acid C-terminal putative protein sorting recognition sequence, GlyGly-CTERM (TIGR03501). The GlyGly-CTERM signal always co-occurs with a subfamily of the rhomboid family intramembrane serine proteases called rhombosortase (TIGR03902). Members occur paired with a second rhombosortase target, with which it also shares an N-terminal motif CSLREA. This protein is designated Acinetobacter rhombotarget A (rbtA).	5.24972e-07
NC_011831.1\|WP_015942018.1\|4030294_4033756_-\|helicase	gnl\|CDD\|197275	cd09178, PLDc_N_Snf2_like, N-terminal putative catalytic domain of uncharacterized HKD family nucleases fused to putative helicases from the Snf2-like family. N-terminal putative catalytic domain of uncharacterized archaeal and prokaryotic HKD family nucleases fused to putative helicases from the Snf2-like family, which belong to the DNA/RNA helicase superfamily II (SF2). Although Snf2-like family enzymes do not possess helicase activity, they contain a helicase-like region, where seven helicase-related sequence motifs are found, similar to those in DEAD/DEAH box helicases, which represent the biggest family within the SF2 superfamily. In addition to the helicase-like region, members of this family also contain an N-terminal putative catalytic domain with one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), and have been classified as members of the phospholipase D (PLD, EC 3.1.4.4) superfamily.	7.35554e-25
NC_011831.1\|WP_015942026.1\|4043801_4044656_-\|DUF72-domain-containing-protein	gnl\|CDD\|376655	pfam01904, DUF72, Protein of unknown function DUF72. The function of this family is unknown.	7.1794e-72
NC_011831.1\|WP_015942019.1\|4034125_4036603_+\|DUF4968-domain-containing-protein	gnl\|CDD\|376446	pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases.	0
NC_011831.1\|WP_083768933.1\|4037224_4037656_+\|hypothetical-protein	gnl\|CDD\|238315	cd00562, NifX_NifB, This CD represents a family of iron-molybdenum cluster-binding proteins that includes NifB, NifX, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme. This domain is a predicted small-molecule-binding domain (SMBD) with an alpha/beta fold that is present either as a stand-alone domain (e.g. NifX and NifY) or fused to another conserved domain (e.g. NifB) however, its function is still undetermined.The SCOP database suggests that this domain is most similar to structures within the ribonuclease H superfamily. This conserved domain is represented in two of the three major divisions of life (bacteria and archaea).	2.77346e-15
NC_011831.1\|WP_049762864.1\|4054190_4054619_-\|DUF1917-domain-containing-protein	gnl\|CDD\|370197	pfam08939, DUF1917, Domain of unknown function (DUF1917). This domain is found in various hypothetical and basophilic leukaemia proteins. It has no known function.	6.55685e-32
NC_011831.1\|WP_015942032.1\|4052981_4054025_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	1.67042e-29
NC_011831.1\|WP_015942027.1\|4044896_4046462_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|143442	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.	0
NC_011831.1\|WP_015942020.1\|4036742_4037273_+\|DUF2892-domain-containing-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	3.33153e-31
NC_011831.1\|WP_015942025.1\|4042166_4043762_-\|hypothetical-protein	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	2.38878e-103
NC_011831.1\|WP_157044931.1\|4052265_4052985_-\|type-II-restriction-endonuclease	gnl\|CDD\|371556	pfam11487, RestrictionSfiI, Type II restriction enzyme SfiI. SfiI is a restriction enzyme that can cleave two DNA sites simultaneously to leave 3-base 3' overhangs. It acts as a homo-tetramer and recognizes a specific eight base-paid palindromic DNA sequence. After binding two copies of its recognition sequence, SfiI becomes activated leading to cleavage of all four DNA strands. The structure of SfiI consists of a central twisted beta-sheet surrounded by alpha-helices.	1.3728e-121
NC_011831.1\|WP_041470688.1\|4023400_4023847_-\|hypothetical-protein	gnl\|CDD\|273915	TIGR01991, HscA, Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK. [Protein fate, Protein folding and stabilization].	0.000593369
NC_011831.1\|WP_015942016.1\|4026075_4026669_-\|hypothetical-protein	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00125275
NC_011831.1\|WP_015942028.1\|4047496_4048276_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.09987e-15
NC_011831.1\|WP_015942017.1\|4026665_4030298_-\|hypothetical-protein	gnl\|CDD\|319645	cd16731, RING-HC_MKRN2, RING finger, HC subclass, found in makorin-2 (MKRN2) and similar proteins. MKRN2, also known as makorin RING finger protein 2, RING finger protein 62 (RNF62), or HSPC070, is a putative ribonucleoprotein that acts as a neurogenesis inhibitor acting upstream of glycogen synthase kinase-3beta (GSK-3beta) in the phosphatidylinositol 3-kinase (PI3K)/Akt pathway. It also functions on promoting cell proliferation of primary CD34+ progenitor cells and K562 cells, indicating its possible involvement in normal and malignant hematopoiesis. Mammalian MKRN2 contains three N-terminal C3H1-type zinc fingers, a motif rich in Cys and His residues (CH), a C3HC4-type RING-HC finger, and another C3H1-type zinc finger at the C-terminus. The third C3H1-type zinc finger, the CH motif, as well as the RING zinc finger are necessary for its anti-neurogenic activity.	0.00077191

>NC_011831.1|WP_083768935.1|4038137_4039220_+|CSLREA-domain-containing-protein
MRSERCVPAEGIPVTTTARHGKTADTGGDPAVNQSFHDGHRHRVTFSPCRSACVRCASTLPRGSCRGLGKTRKHRYGIFWKIRKGVTSMDARRVILLLLLPILLPPILLPTSVLPSAAGQTYTVTTLADTVAPDGSCSLREAILEAQHETDTDCPGSPSNADDTITIAVSGTIVLSEPLPDIIGRRFVITPDRVDEFRFGALTIRGNPTLTISGDGRHRIITVKDAGSLTLDTLTLTDAVAPDPGGAIRIINADQVTITNSRVTNSTAPRGGAISASNTRVTVERSVVAENRASDRGGAIDVFAGQLIIRDSELSRNTAEYSGGGAFPSQACRRPSLCRRSLPRTRPRPPTAQADKGGRS
>NC_011831.1|WP_083768933.1|4037224_4037656_+|hypothetical-protein
MGARCYREAINWEDAVKIAFATDDHHTISPHLGRAQWYEVVTIEQGQVVNREARPKGRHHHHGDEEHDHHHHHHRHDAHHWLVEAVSDCQMIVARGMGEPAFQGVQAAGIQAICTPLRTIDEAVQAYVNGTLTHHPERVHHRH
>NC_011831.1|WP_015942020.1|4036742_4037273_+|DUF2892-domain-containing-protein
MKMTEYQNHLRTYTQPVVVDVWAPWCMPCRVTRPILKRLAQEYQGRVALWEVNAEEHPDLLRELRIYGIPTLIAYRDGQEVSRQLGAKSEAELRSLFQHLAEGKTPPRLQPLERLLRIMIALVLVGLVWFGVGGWPLLVLAGLIFFSAVYDRCPIWKAVTSWVRDVTAKRSTGRTP
>NC_011831.1|WP_015942019.1|4034125_4036603_+|DUF4968-domain-containing-protein
MTHAPARVGLTDTRYFLPLSRLERVQPIERGILAALDHEWLRVEFIRDDIVRLKISRGGVFDEHPTYAVAVDVMATPIPVFHIVETEATVVVRGVQLEVVIGRDPFSVRVCRADGSVVAETARGPDGVPWAYATLNDSFAFHRVCAREDAFLGLGEKTGRLNRKGRDFILWNNDVLSPQGEAEFAVGRDPSDPRAKNTSTEFDPYYVSIPFFYHLDRHGNAAGFFLDNSYRVHVDFTPPETYGICALGGQYTEYIFAGPQMAAILEGFTWLTGRLAPPPIWALGYHQCRWHRYSQSEVLALAARHRERNIPCDTLWLDIEHMDGYRVFTWNRELFPDPRTLAQQLHDQGFRLITIVDPGVKVDPQFALYETGRANDFFCRTSSGDIYIGQVWPGRTAFPDFVKPDVRTWWGQLNADHARLGIAGIWNDMNEPATGDIPPYAMRFNGGREPHERYHNQYALLMAMATVEGLRAAFPDRRTFVLSRAGFAGIQRYAANWMGDNCARWDHLWLSMPMAMGLGLSGQAFVGADVGGFAGDASPELFARWMQCAALTAFCRNHSAYGHIDQYVWSFGPAIERIARAAIALRYRLMPYLVTAFMHTVETGEPVQQPPVFAYQSDPLTHTIDDQFLLGRDLLVAPVYVAGATSRQLYLPAGEWYDWYSDACYTGEQFIVVAAPLDRIPLLVRAGAVIPLWPDVPPSTMGYYPTRLELHLFVPLFDGTYTSDLHEDDGLTMAFQHGAYYRTTFTVERRGQQITLTATVRGDGFAEFAREAVTLVIHGAQPVSITVNGERHAVLGEQVTFADHGQGFVVVLEEAAPGDVSAQSE
>NC_011831.1|WP_015942018.1|4030294_4033756_-|helicase
MPRIFDNTHLTLADGLKAFSGGAQSFAFCVGYLNLRGWDHVADLVERLPGGKEDAACRVLVGMYRPPEEEMKALAYLRREHEHVVDGITLARLKRQFTERFKQQLEFGVPSAHAERTLRRLAAQLRARKVFLKAFLRYPLHAKLYLVRRNDPVTPLIGFVGSSNLTLAGLSQQGELNVDVVEQDAATKLQVWFEERWRDELAIDLTDTLAELIETSWARTELVRPYLVYLKVAYHLSEEAREGEREFRLPRIFHDKGTPLLDFQERAVSLAAHYLYRRGGVLLGDVVGLGKTLMATAIARIFQEDDQSNTLVVCPPKLAPMWERYLQTYEINGRVLSVGKVIETLGRDDAPRYRLLILDESHNLRNRESKRYRALRDYIERNEPRVLLLTATPYNKQFSDLGNQLRLFLDENQDLHVRPERFFHDWAASGKHEQDFIARFQTSPCSLRAFEQSSHPEDWRDLMRLFLVRRTRRFIIDHYATFDKEKQRHYVMLNGKPAYFPLREPKRLSFTITENDPTDQYARLFRDDVVEVIEQLILPRYGLAQYLVARAERMAKSDEKRILDNLNRAGRRLIGFCRTNLFKRLESSGHSFLLSVRRHILRNLVTLHALEHGLPVPIGTQDAAMLDTAVSDTDDDAIATDEVPPPDESAAESAAAGNAPPTLAAFKARAAAVYETYTRQFRDRFDWLAAKFFRPELRQALEADATALLGILARIGEWNPNRDTKLEELTKLLTTQHARDKVLVFTQFADTAQYLQRELTRQNITDLAIVTNQTDDPVTLARRFSPRSNGGLPPGEQELRILIATDVLAEGQNLQDAHIIVNYDLPWAIIRLIQRAGRVDRIGQQHDTILVYSFLPAEGVERIIRLRQRLFHRLQQNQEVIGTDETFFGEAAANTLRDLYTEKTGSLDDDPSDDDIDLASLALQVWKSAAADDQRKAVALPPIVSATRAIAETADARESPPGVITYVRYPDGTDALVRVDEHGRFVSQSVSAIFRTLACAPDTPPLPRAENHHELVTHCFNHVMKEQVDPGGQLGSLRSVRRKLYDRLKGYREQLQARPTLFINETLEQLERVLDMLWRYPLRRAAQDAISRQMRLGITDEALLDLVVQYAANENLCDVTTEDAQAPAEPRIICSMGLALTAPIPVNTGDDQR
>NC_011831.1|WP_015942017.1|4026665_4030298_-|hypothetical-protein
MNNLLQRIQSCLNSAGSPQKLGELFCQTLNWSAPRGLLPRTLDFGAPINQSITLQPVARLSGLPVYRVIWPGDRLPGITARRAVQRALKPVHAEHVLCYVTQDARQLAFTWARERSDGKIELRTLPYDVGSPARTTVERLAELAFTLDELAHGEPPITTLTDKLNRAFDVEAVTRRFFADYKQVFATLQRLLFDATGDKVWAHDYALQLLNRLMFLYFIQRKGWLGGNPRFIAEFWRAYKASNQPNNSFFERWLSVLFFEAFNNTFHGGHRQFPSAIYEALQLAPYLNGGLFTRNRLDDAHSVTVPDAFFATLFDEFDGSRPGFLERYNFTIAESTPLDIEVAVDPEMIGKVYESLVNITFEGITDDDRRGSAGIFYTSRVEIDLMCRLALVDALTNRLGTDKKPLLYDAIFAYEPAEKEAADAAIADQNLWPDLNRMLRETTICDPACGSGAFLVGMLLVLDDLQARANAQLGIDETPYERRRRIIGEQLYGVDVMDWAVHVTELRLWLQLVVETELAPAELKFRPLLPNLSFKIRCGDSLVQEIGGIDFGLHRAHLAISAQLKGRITQLKGKKLRFYQGQKDLREADLKQEEVNLFRAILDYKQHVLQTHIATLTHQIESPVEQVALPGLEAPTDRAAYQRRLEQLRAEREEKHAELARITDALAALRSAQHVPFVWDIAFVEIFEGDKGGFDIVIGNPPYVRQEMIAPPRLDPNDFGGETSDRWKEQKKAYKAKLQQSVAAAWPRFFRYKSGKADFRKLDGKSDLYIYFYLHGLALLNPQGSFCFITSNSWLDVGYGADLQEFLLKHSHVRFILDNERKRSFAQADVNTIIALLAPPDDRREHGLEHTARFVMFTVPFEEVLSAETFKALEAATERQRTDHWRITVVPQRQLFEEGLVREDDEEATPGKPTKSRGPLIKTARYEANKWGGKYLRAPDIFFTILEKGKGKLVRLGDIAEVRFGIKTGANEFFYLDDEKIRQWGIEEEFLKPVIKSPRECRSIVIKPEDLKYKIFMCHKDKAELQGTAALEYITWGETQGFHERPSCRGRQRWWDVGVRPKARVSINYLVDETMRFFMKEDGFYVSDNFQEWHVSADDFWQAGVAANSTVFQLFANITGRANFGGGLMKIQTYEVAAMEVLAPSTLPLSRCRSALQHVGRIDLNSPDRRALDDVVFDVLGLTAGEREAVYEAVVALVRARLEKARSVKP
>NC_011831.1|WP_015942016.1|4026075_4026669_-|hypothetical-protein
MTYDPEQHHRRSIRLPGYDYVQAGGYFITICTHDRTNMFGEVVDGEMQVNAVGEVVCAEWFRTAQIRPYVRLYDDEFVVMPNHIHGIIWIINDDVGATRRVAPARRVAHRVGATRRVAPTDPPRGPASGSIGAIVGQFKSIATKRINALRGTPGAPVWQRNYYEHIIRTEDALQRIREYIATNPLRWHLDRENPDEW
>NC_011831.1|WP_157044893.1|4024894_4025383_+|hypothetical-protein
MAGGGAARRGDPSGRPYTMGNPTRWGRTQWAMYRNGQRTAMGNAPRRPDANRRAVVMVGVWPVGVRHVGATRRVALTRWATHRVAPTRWATRPDGQRTTSPRREPACRGDGCGTVCGGAACRGDPVGRPNPMGNAPRRPNPMGNPTRWATHHVAPTQTGVPW
>NC_011831.1|WP_041470691.1|4024317_4024674_+|hypothetical-protein
MGTAWRAPTTIRLGNPTGRPDANRRAVVMVGVWPVGVRHVGATRRVALTRWATHRVAPTRWATRRNGRRTALPRREPACRGDGWGTVCGGAACRGDPTGRPYTMGDAPRRPYPMGNPT
>NC_011831.1|WP_041470688.1|4023400_4023847_-|hypothetical-protein
MLTSDELTPTSNGCTQRELEILRRELNEAQALIRSLRRQLEKTMAAAQEAQRAHAKMVETLTETMRENTILCHERDMWRARAQRLEAQRHEEPRPGAVIDISSLAGQISEDEANAIRKAMARLHHPDVGGDPERMKAWNAALDRLFRQ
>NC_011831.1|WP_015942024.1|4041031_4041580_-|hypothetical-protein
MMSRVPGQSLAWIAVFLAVFTPFVFGILDYYERHNALATAHTIATFAARAATTELDLETIQDTDVRLDRHRAPARMCEVLMMNLGVTQAVRGACNRRGMDFFAVTNPIAARYWTAAERQQILQSVRYCLDQDCDYMHPALAGCPRFDVGIPQACVEITVPVRGFGILPVRESVTVVGAAVFR
>NC_011831.1|WP_015942025.1|4042166_4043762_-|hypothetical-protein
MQLATLFGRTLRQAPAEADTLATQLLWRAGMLRTLNDGEPVLLPLGSAILRRLAAILGTAVQNDGAQEIVVPTTTTASWSDTVTALARRDIDSYRQLPQLLWSWRRRKRLATRPRGLVDMPTPTTLSWAVLALDEEQAQQHLTVTRNRLSIALHQCGLDHVAAALQAPGTVTIIVDSLAKPVATLDCPACGFRAPLEQAPLAPLPPYVGPTPTMSLVETPNANTIAALAAYLDIPTASTAKALFFTDRRDDAQRLVFAVVRGDREASLAKLAAAIGAGELTPASAEQIVACGAMPGYASPVGVHDVLVVADYTVVNGTPLVAGANRPGYHLRDVIYGRDWEATLVADIAQAVVGDPCPRCGTARIEGYGAAVGTITAPYQTALPIQDAGGQNRPLWIAGIELDLEPLIHLGVEQHHDERGIVWPAAIAPVDIHLVTIGRGEAVVTAAHTLATELRNAGWSVLIDDRDERAGVKFNDADLIGAPWRLVVSEKLLAAGQVEVRRRTEVQATVIAQAKVIAWLQGVSTTSRNKE
>NC_011831.1|WP_015942026.1|4043801_4044656_-|DUF72-domain-containing-protein
MIRIGCAVWAYPGWVGDLFPPGTRSSEFLKLYSRQFTTVEGNTTFYATPSPATVARWAAETPVGFRFCCKLPREVSHGGPLAEKLPLARAFIERMQGLGERCGPFFLQLPPGYGPTRLADLERFLAGWPTEAALAVEVRHPDWYVPVGEEPLMALLDRYRIGRVVMDVRPIRDPDDPGGALLNDARERKPDVPLRPLRGGGPTLIRYIGHPDLERNDPFLEEWAARVTEWAQTDPHMYLFMHCPDEAQSPRLGRDITARLRNRGAPIAEAEPKPNEPPAQLGLF
>NC_011831.1|WP_015942027.1|4044896_4046462_-|L-glutamate-gamma-semialdehyde-dehydrogenase
MLTPFQNEPFGNFDSGNRRAAMQRAIRHVAGQQGGTYPLVIGGEHIITERKLASINPAEPKKVVGYVSSASQEHAHQALLAADAAFRTWSRTPVSARAQVLLRAAAIMRRRKEELAAWMMHEVSKNWVEADADVAEAIDFCEWYARQALALQGERQPLVPYPGEFNELRYIPLGPGLAIPPWNFPLAITTTLTVAPIVVGNTVVLKPSPRAPVMANLLVQILEEAGLPPGVVNLVTGEDAVIGDFLVDHPLVRFIGFTGSKNVGLRIQQRAAVRQPGQNWLKRAILEMGGKDAIIVDETADLEAAATGIVVSAFGFQGQKCSACSRAIVVEQVYDQVLQRVVEKAKALRLGNPTKPETDMGAVIDQRAFDSISQYIAIGQEEGRLVCGGEVIDHELVKDGGFFINPTIFADVKPHARIAQEEIFGPVLAFIRAANFDEALAIANDTEYGLTGGLYSRSLERLERAREEFHVGNLYFNRKCTGALVGVQPFGGFNMSGTDSKAGGSDYLRLFTQPKVISERF
>NC_011831.1|WP_015942028.1|4047496_4048276_-|class-I-SAM-dependent-methyltransferase
MNQREYEYKGLMAEAWDVLRGDTSNWADRHFYLAIIQKYGQPVLDVGCGTGRLLLDYLQQGVDIDGVDNSPEMLSICQYKADQLKLRPTLYKQYLERLELPRKYKTILVPSSTLQLITELEAIELAMKRLYEHLLPGGILVASMMTLWKEGEPLESAWEKTAVRKTDGVTFRRVARAWFDPISECEHTEDVYQKIIDEQVVMEELHQRSPATRSYSQSQAKDLFEKAGFQNVRLFSEFTFDVVKSEDRLFTVIGQRPFS
>NC_011831.1|WP_015942029.1|4049600_4050638_-|site-specific-DNA-methyltransferase
MTRINTTSPFRALPAPVYTTRYGACYLGDSLDLLKRLPDDCVDLVVTSPPFALLRQKAYGNTDQSEYVEWLCRFGAEVRRVLRETGSFVLDLGGAYQRGVPVRSLYQYRVLLKMCDEVGFYLAEEFFWYNPAKLPSPIEWVNKRKIRVKDSVNTVWWFSKSEWPKADVRQVLAPYSERMKTLLKNPDAFYKPKNRPSGHDISKGFGSDNGGAIPSNLLQIPNTESNSSYLRLSKLVGIEAHPARFPAALPEFFIKLLTTEGDLVLDIFAGSNTTGKVAEQFGRRWIAMEIDAGYVAGSALRFMEHLPQSEVAACFARLSVSSRSAPVDLSGPATLFDEAKVERGT
>NC_011831.1|WP_157044930.1|4050634_4051855_-|HEAT-repeat-domain-containing-protein
MLDSDWVAFPILSADESVWSAGGLHEQRSLWRERTLTTWHVEGWINLFTVESFRCVAPKQLKPKGVSEGSEVQVKWKARFAPSSGRVVAANGGRLDYLLDNDPSKPRHFRLATDERPFLAAGDYFQLNQVLAGQVEPMTTAASRCVGGCDTGKILQMLASRERTVRFTGCKLARLARAAGLVNEVRALAEDSEEDAYVRMEAKSYLCEVAGDSADDQFRAILLGHADEQMRLEASVTLAETRTPTSFDLLRTVLEDATQPLFLRSACAWAIGCHGTRDAAQVLVQAFADVAPEIREEALIALADLGAVGFDALLRGLEASSAAIAAGAAETLRRIRGAPAKDIAALAERSSSTWPTWTLAHLSKDAVAPYVAALQSKRPDVHYAISVLWNFLESWIANDWTPRATP
>NC_011831.1|WP_157044931.1|4052265_4052985_-|type-II-restriction-endonuclease
MTMLLDPETLKHDLDRLEEIEKATLRLVTQAIYDYRETALEIFHQEGDLAADISEDITREALDRLGMPRIDQRLFGKVDYKRACYVFHPDYALKQALFVDSKAEKVGGQGTATLQLSQLSMAVKQTRSGQTVNIQGKMPTVITLRGEKYLTTTLFVKYNYDKEGGVHILKSIIVAAVPNGMLQDRYNPIPEDTIWTAGRNAPSLGEEFRVRLSFSRLKHKAAWRVQTIPMPPEPFYWSS
>NC_011831.1|WP_015942032.1|4052981_4054025_-|site-specific-DNA-methyltransferase
MSGVIEEMDFKIDRLPKGLQDTFRELYVNGNGNGTLHDVRPNEIYVGDARALLPNIEPNSIALSVWSPPYFVGKEYEAHLSFEDWQDLLRTVIHLHFPIIKPGGFLVINIADILVFKDPSMPRIQAEAVTRKRCPVTKADVLKAMAEHPDYNRYQLAKLLGCSEQTIDRRLHGNNIRGGKYESQTRVKIVGGLVEEWALSAGLYPYDRRIWVKDAAWENSRWASLSYRSVDEFEYLYFFWKPGITKFDRKRLSADEWKNWGSRGVWYVPSVRANDDHEAKFPIELPTRVIRLLTDPGDIVLDCFMGSGTTAVAAIRENRQYIGIEILEKYVNLARQRIAAEHFSTGK
>NC_011831.1|WP_049762864.1|4054190_4054619_-|DUF1917-domain-containing-protein
MKCRRMLIPSKETSQPWIYADGKGEGCYEDGQTYVGKWLVFVSHEHVDEVWERIRRAVEAGNLGISAKVSTSRPSGYKSTVHVICVYTYDFRDKADVGRVLTALRDIGITGRLYYKTDQATLSGVYAKKKQRASLYASDDFE

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Crispr_ID: NC_011831_33

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_33

4041821-4041933

Orphan

Consensus_repeat	Method
GTTCGAATAATAATTTTGCCTGAAGGTTGTCCACAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_33

>merge|NC_011831|33|4041821-4041933|CRISPRCasFinder
GTTCGAATAATAATTTTGCCTGAAGGTTGTCCACAAGTGATATACCGGAGCACCGAGGAGTTCGTAGGATCGTGAAGTTCGAATAATAATTTTGCCTGAAGGTTGTCCACAAG

>NC_011831|33|29|4041821-4041933|CRISPRCasFinder
GTTCGAATAATAATTTTGCCTGAAGGTTGTCCACAAG	TGATATACCGGAGCACCGAGGAGTTCGTAGGATCGTGAA
GTTCGAATAATAATTTTGCCTGAAGGTTGTCCACAAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015942029.1\|4049600_4050638_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NC_011831.1\|WP_157044930.1\|4050634_4051855_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NC_011831.1\|WP_083768935.1\|4038137_4039220_+\|CSLREA-domain-containing-protein	unknown	unknown	gnl\|CDD\|275057
NC_011831.1\|WP_015942018.1\|4030294_4033756_-\|helicase	unknown	unknown	gnl\|CDD\|197275
NC_011831.1\|WP_015942026.1\|4043801_4044656_-\|DUF72-domain-containing-protein	unknown	unknown	gnl\|CDD\|376655
NC_011831.1\|WP_015942019.1\|4034125_4036603_+\|DUF4968-domain-containing-protein	unknown	unknown	gnl\|CDD\|376446
NC_011831.1\|WP_083768933.1\|4037224_4037656_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238315
NC_011831.1\|WP_015942024.1\|4041031_4041580_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_049762864.1\|4054190_4054619_-\|DUF1917-domain-containing-protein	unknown	unknown	gnl\|CDD\|370197
NC_011831.1\|WP_015942032.1\|4052981_4054025_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NC_011831.1\|WP_015942033.1\|4054834_4055293_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942027.1\|4044896_4046462_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143442
NC_011831.1\|WP_015942020.1\|4036742_4037273_+\|DUF2892-domain-containing-protein	unknown	unknown	gnl\|CDD\|239245
NC_011831.1\|WP_015942025.1\|4042166_4043762_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236405
NC_011831.1\|WP_157044893.1\|4024894_4025383_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_157044931.1\|4052265_4052985_-\|type-II-restriction-endonuclease	unknown	unknown	gnl\|CDD\|371556
NC_011831.1\|WP_041470696.1\|4039147_4040953_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182059
NC_011831.1\|WP_015942016.1\|4026075_4026669_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224854
NC_011831.1\|WP_015942028.1\|4047496_4048276_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NC_011831.1\|WP_015942017.1\|4026665_4030298_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319645

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015942029.1\|4049600_4050638_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	2.69158e-46
NC_011831.1\|WP_157044930.1\|4050634_4051855_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	3.65044e-06
NC_011831.1\|WP_083768935.1\|4038137_4039220_+\|CSLREA-domain-containing-protein	gnl\|CDD\|275057	TIGR04212, conserved_hypothetical_protein, Acinetobacter rhombotarget A. Members of this protein family are found, so far, exclusively in the genus Acinetobacter. Members average just over 600 amino acids in length, including a 22-amino acid C-terminal putative protein sorting recognition sequence, GlyGly-CTERM (TIGR03501). The GlyGly-CTERM signal always co-occurs with a subfamily of the rhomboid family intramembrane serine proteases called rhombosortase (TIGR03902). Members occur paired with a second rhombosortase target, with which it also shares an N-terminal motif CSLREA. This protein is designated Acinetobacter rhombotarget A (rbtA).	5.24972e-07
NC_011831.1\|WP_015942018.1\|4030294_4033756_-\|helicase	gnl\|CDD\|197275	cd09178, PLDc_N_Snf2_like, N-terminal putative catalytic domain of uncharacterized HKD family nucleases fused to putative helicases from the Snf2-like family. N-terminal putative catalytic domain of uncharacterized archaeal and prokaryotic HKD family nucleases fused to putative helicases from the Snf2-like family, which belong to the DNA/RNA helicase superfamily II (SF2). Although Snf2-like family enzymes do not possess helicase activity, they contain a helicase-like region, where seven helicase-related sequence motifs are found, similar to those in DEAD/DEAH box helicases, which represent the biggest family within the SF2 superfamily. In addition to the helicase-like region, members of this family also contain an N-terminal putative catalytic domain with one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), and have been classified as members of the phospholipase D (PLD, EC 3.1.4.4) superfamily.	7.35554e-25
NC_011831.1\|WP_015942026.1\|4043801_4044656_-\|DUF72-domain-containing-protein	gnl\|CDD\|376655	pfam01904, DUF72, Protein of unknown function DUF72. The function of this family is unknown.	7.1794e-72
NC_011831.1\|WP_015942019.1\|4034125_4036603_+\|DUF4968-domain-containing-protein	gnl\|CDD\|376446	pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases.	0
NC_011831.1\|WP_083768933.1\|4037224_4037656_+\|hypothetical-protein	gnl\|CDD\|238315	cd00562, NifX_NifB, This CD represents a family of iron-molybdenum cluster-binding proteins that includes NifB, NifX, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme. This domain is a predicted small-molecule-binding domain (SMBD) with an alpha/beta fold that is present either as a stand-alone domain (e.g. NifX and NifY) or fused to another conserved domain (e.g. NifB) however, its function is still undetermined.The SCOP database suggests that this domain is most similar to structures within the ribonuclease H superfamily. This conserved domain is represented in two of the three major divisions of life (bacteria and archaea).	2.77346e-15
NC_011831.1\|WP_049762864.1\|4054190_4054619_-\|DUF1917-domain-containing-protein	gnl\|CDD\|370197	pfam08939, DUF1917, Domain of unknown function (DUF1917). This domain is found in various hypothetical and basophilic leukaemia proteins. It has no known function.	6.55685e-32
NC_011831.1\|WP_015942032.1\|4052981_4054025_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	1.67042e-29
NC_011831.1\|WP_015942027.1\|4044896_4046462_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|143442	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.	0
NC_011831.1\|WP_015942020.1\|4036742_4037273_+\|DUF2892-domain-containing-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	3.33153e-31
NC_011831.1\|WP_015942025.1\|4042166_4043762_-\|hypothetical-protein	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	2.38878e-103
NC_011831.1\|WP_157044931.1\|4052265_4052985_-\|type-II-restriction-endonuclease	gnl\|CDD\|371556	pfam11487, RestrictionSfiI, Type II restriction enzyme SfiI. SfiI is a restriction enzyme that can cleave two DNA sites simultaneously to leave 3-base 3' overhangs. It acts as a homo-tetramer and recognizes a specific eight base-paid palindromic DNA sequence. After binding two copies of its recognition sequence, SfiI becomes activated leading to cleavage of all four DNA strands. The structure of SfiI consists of a central twisted beta-sheet surrounded by alpha-helices.	1.3728e-121
NC_011831.1\|WP_041470696.1\|4039147_4040953_+\|hypothetical-protein	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0.000129264
NC_011831.1\|WP_015942016.1\|4026075_4026669_-\|hypothetical-protein	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00125275
NC_011831.1\|WP_015942028.1\|4047496_4048276_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.09987e-15
NC_011831.1\|WP_015942017.1\|4026665_4030298_-\|hypothetical-protein	gnl\|CDD\|319645	cd16731, RING-HC_MKRN2, RING finger, HC subclass, found in makorin-2 (MKRN2) and similar proteins. MKRN2, also known as makorin RING finger protein 2, RING finger protein 62 (RNF62), or HSPC070, is a putative ribonucleoprotein that acts as a neurogenesis inhibitor acting upstream of glycogen synthase kinase-3beta (GSK-3beta) in the phosphatidylinositol 3-kinase (PI3K)/Akt pathway. It also functions on promoting cell proliferation of primary CD34+ progenitor cells and K562 cells, indicating its possible involvement in normal and malignant hematopoiesis. Mammalian MKRN2 contains three N-terminal C3H1-type zinc fingers, a motif rich in Cys and His residues (CH), a C3HC4-type RING-HC finger, and another C3H1-type zinc finger at the C-terminus. The third C3H1-type zinc finger, the CH motif, as well as the RING zinc finger are necessary for its anti-neurogenic activity.	0.00077191

>NC_011831.1|WP_015942024.1|4041031_4041580_-|hypothetical-protein
MMSRVPGQSLAWIAVFLAVFTPFVFGILDYYERHNALATAHTIATFAARAATTELDLETIQDTDVRLDRHRAPARMCEVLMMNLGVTQAVRGACNRRGMDFFAVTNPIAARYWTAAERQQILQSVRYCLDQDCDYMHPALAGCPRFDVGIPQACVEITVPVRGFGILPVRESVTVVGAAVFR
>NC_011831.1|WP_041470696.1|4039147_4040953_+|hypothetical-protein
MQTVFTENEAKTADSSGGQGGAILIDGDTAITVQGAVFHENTAMRDGGAIAIRDARRVDVTDSHFANNTAGSATLRASGGAIWAVKADYTPADPPLTITAGTFTANYAWDRGGAIFAQWYATVIAQSRFTENGSDYDGGAISMSMGSLVIRDSELTQNRSVSYGGAIYAYIHDHTLTVTNTVFRGNECDGDGGAIWKRRGHARIEASRFIENRTGGFGGGLKVTVGTTDVIGSEFRGNTARLGGGIHSDTETLTVRASSFVANTARLGGGIANDTFGHGGSARIETTTFVRNAATVGDEREADALPPVGSGDEDPPPVGSGDEDPLPFGSGGALFNTATLEVVAATLHENTAERQGGGIFSATKSDNPPSRLTVVNTIITGSPHGGDCVSFSPVDGHHTIIGTPTAACGLSESPLIGIDPRLGELTGDPPYLPLLPDSPAIDAGDSTMCPGPGQNGVPRPVGSACDIGAVEWTADTDPPTLTAVACITDPPAGTSVQFRVVFSEAVRDVDATDLVVEASPASTPATITDLTARSAAEYLVTVGEYGSDTETLTLAIASTATITDLAGHPLVPPSAMTGGRCAVGRSPSTPDRQIFLPLIVR
>NC_011831.1|WP_083768935.1|4038137_4039220_+|CSLREA-domain-containing-protein
MRSERCVPAEGIPVTTTARHGKTADTGGDPAVNQSFHDGHRHRVTFSPCRSACVRCASTLPRGSCRGLGKTRKHRYGIFWKIRKGVTSMDARRVILLLLLPILLPPILLPTSVLPSAAGQTYTVTTLADTVAPDGSCSLREAILEAQHETDTDCPGSPSNADDTITIAVSGTIVLSEPLPDIIGRRFVITPDRVDEFRFGALTIRGNPTLTISGDGRHRIITVKDAGSLTLDTLTLTDAVAPDPGGAIRIINADQVTITNSRVTNSTAPRGGAISASNTRVTVERSVVAENRASDRGGAIDVFAGQLIIRDSELSRNTAEYSGGGAFPSQACRRPSLCRRSLPRTRPRPPTAQADKGGRS
>NC_011831.1|WP_083768933.1|4037224_4037656_+|hypothetical-protein
MGARCYREAINWEDAVKIAFATDDHHTISPHLGRAQWYEVVTIEQGQVVNREARPKGRHHHHGDEEHDHHHHHHRHDAHHWLVEAVSDCQMIVARGMGEPAFQGVQAAGIQAICTPLRTIDEAVQAYVNGTLTHHPERVHHRH
>NC_011831.1|WP_015942020.1|4036742_4037273_+|DUF2892-domain-containing-protein
MKMTEYQNHLRTYTQPVVVDVWAPWCMPCRVTRPILKRLAQEYQGRVALWEVNAEEHPDLLRELRIYGIPTLIAYRDGQEVSRQLGAKSEAELRSLFQHLAEGKTPPRLQPLERLLRIMIALVLVGLVWFGVGGWPLLVLAGLIFFSAVYDRCPIWKAVTSWVRDVTAKRSTGRTP
>NC_011831.1|WP_015942019.1|4034125_4036603_+|DUF4968-domain-containing-protein
MTHAPARVGLTDTRYFLPLSRLERVQPIERGILAALDHEWLRVEFIRDDIVRLKISRGGVFDEHPTYAVAVDVMATPIPVFHIVETEATVVVRGVQLEVVIGRDPFSVRVCRADGSVVAETARGPDGVPWAYATLNDSFAFHRVCAREDAFLGLGEKTGRLNRKGRDFILWNNDVLSPQGEAEFAVGRDPSDPRAKNTSTEFDPYYVSIPFFYHLDRHGNAAGFFLDNSYRVHVDFTPPETYGICALGGQYTEYIFAGPQMAAILEGFTWLTGRLAPPPIWALGYHQCRWHRYSQSEVLALAARHRERNIPCDTLWLDIEHMDGYRVFTWNRELFPDPRTLAQQLHDQGFRLITIVDPGVKVDPQFALYETGRANDFFCRTSSGDIYIGQVWPGRTAFPDFVKPDVRTWWGQLNADHARLGIAGIWNDMNEPATGDIPPYAMRFNGGREPHERYHNQYALLMAMATVEGLRAAFPDRRTFVLSRAGFAGIQRYAANWMGDNCARWDHLWLSMPMAMGLGLSGQAFVGADVGGFAGDASPELFARWMQCAALTAFCRNHSAYGHIDQYVWSFGPAIERIARAAIALRYRLMPYLVTAFMHTVETGEPVQQPPVFAYQSDPLTHTIDDQFLLGRDLLVAPVYVAGATSRQLYLPAGEWYDWYSDACYTGEQFIVVAAPLDRIPLLVRAGAVIPLWPDVPPSTMGYYPTRLELHLFVPLFDGTYTSDLHEDDGLTMAFQHGAYYRTTFTVERRGQQITLTATVRGDGFAEFAREAVTLVIHGAQPVSITVNGERHAVLGEQVTFADHGQGFVVVLEEAAPGDVSAQSE
>NC_011831.1|WP_015942018.1|4030294_4033756_-|helicase
MPRIFDNTHLTLADGLKAFSGGAQSFAFCVGYLNLRGWDHVADLVERLPGGKEDAACRVLVGMYRPPEEEMKALAYLRREHEHVVDGITLARLKRQFTERFKQQLEFGVPSAHAERTLRRLAAQLRARKVFLKAFLRYPLHAKLYLVRRNDPVTPLIGFVGSSNLTLAGLSQQGELNVDVVEQDAATKLQVWFEERWRDELAIDLTDTLAELIETSWARTELVRPYLVYLKVAYHLSEEAREGEREFRLPRIFHDKGTPLLDFQERAVSLAAHYLYRRGGVLLGDVVGLGKTLMATAIARIFQEDDQSNTLVVCPPKLAPMWERYLQTYEINGRVLSVGKVIETLGRDDAPRYRLLILDESHNLRNRESKRYRALRDYIERNEPRVLLLTATPYNKQFSDLGNQLRLFLDENQDLHVRPERFFHDWAASGKHEQDFIARFQTSPCSLRAFEQSSHPEDWRDLMRLFLVRRTRRFIIDHYATFDKEKQRHYVMLNGKPAYFPLREPKRLSFTITENDPTDQYARLFRDDVVEVIEQLILPRYGLAQYLVARAERMAKSDEKRILDNLNRAGRRLIGFCRTNLFKRLESSGHSFLLSVRRHILRNLVTLHALEHGLPVPIGTQDAAMLDTAVSDTDDDAIATDEVPPPDESAAESAAAGNAPPTLAAFKARAAAVYETYTRQFRDRFDWLAAKFFRPELRQALEADATALLGILARIGEWNPNRDTKLEELTKLLTTQHARDKVLVFTQFADTAQYLQRELTRQNITDLAIVTNQTDDPVTLARRFSPRSNGGLPPGEQELRILIATDVLAEGQNLQDAHIIVNYDLPWAIIRLIQRAGRVDRIGQQHDTILVYSFLPAEGVERIIRLRQRLFHRLQQNQEVIGTDETFFGEAAANTLRDLYTEKTGSLDDDPSDDDIDLASLALQVWKSAAADDQRKAVALPPIVSATRAIAETADARESPPGVITYVRYPDGTDALVRVDEHGRFVSQSVSAIFRTLACAPDTPPLPRAENHHELVTHCFNHVMKEQVDPGGQLGSLRSVRRKLYDRLKGYREQLQARPTLFINETLEQLERVLDMLWRYPLRRAAQDAISRQMRLGITDEALLDLVVQYAANENLCDVTTEDAQAPAEPRIICSMGLALTAPIPVNTGDDQR
>NC_011831.1|WP_015942017.1|4026665_4030298_-|hypothetical-protein
MNNLLQRIQSCLNSAGSPQKLGELFCQTLNWSAPRGLLPRTLDFGAPINQSITLQPVARLSGLPVYRVIWPGDRLPGITARRAVQRALKPVHAEHVLCYVTQDARQLAFTWARERSDGKIELRTLPYDVGSPARTTVERLAELAFTLDELAHGEPPITTLTDKLNRAFDVEAVTRRFFADYKQVFATLQRLLFDATGDKVWAHDYALQLLNRLMFLYFIQRKGWLGGNPRFIAEFWRAYKASNQPNNSFFERWLSVLFFEAFNNTFHGGHRQFPSAIYEALQLAPYLNGGLFTRNRLDDAHSVTVPDAFFATLFDEFDGSRPGFLERYNFTIAESTPLDIEVAVDPEMIGKVYESLVNITFEGITDDDRRGSAGIFYTSRVEIDLMCRLALVDALTNRLGTDKKPLLYDAIFAYEPAEKEAADAAIADQNLWPDLNRMLRETTICDPACGSGAFLVGMLLVLDDLQARANAQLGIDETPYERRRRIIGEQLYGVDVMDWAVHVTELRLWLQLVVETELAPAELKFRPLLPNLSFKIRCGDSLVQEIGGIDFGLHRAHLAISAQLKGRITQLKGKKLRFYQGQKDLREADLKQEEVNLFRAILDYKQHVLQTHIATLTHQIESPVEQVALPGLEAPTDRAAYQRRLEQLRAEREEKHAELARITDALAALRSAQHVPFVWDIAFVEIFEGDKGGFDIVIGNPPYVRQEMIAPPRLDPNDFGGETSDRWKEQKKAYKAKLQQSVAAAWPRFFRYKSGKADFRKLDGKSDLYIYFYLHGLALLNPQGSFCFITSNSWLDVGYGADLQEFLLKHSHVRFILDNERKRSFAQADVNTIIALLAPPDDRREHGLEHTARFVMFTVPFEEVLSAETFKALEAATERQRTDHWRITVVPQRQLFEEGLVREDDEEATPGKPTKSRGPLIKTARYEANKWGGKYLRAPDIFFTILEKGKGKLVRLGDIAEVRFGIKTGANEFFYLDDEKIRQWGIEEEFLKPVIKSPRECRSIVIKPEDLKYKIFMCHKDKAELQGTAALEYITWGETQGFHERPSCRGRQRWWDVGVRPKARVSINYLVDETMRFFMKEDGFYVSDNFQEWHVSADDFWQAGVAANSTVFQLFANITGRANFGGGLMKIQTYEVAAMEVLAPSTLPLSRCRSALQHVGRIDLNSPDRRALDDVVFDVLGLTAGEREAVYEAVVALVRARLEKARSVKP
>NC_011831.1|WP_015942016.1|4026075_4026669_-|hypothetical-protein
MTYDPEQHHRRSIRLPGYDYVQAGGYFITICTHDRTNMFGEVVDGEMQVNAVGEVVCAEWFRTAQIRPYVRLYDDEFVVMPNHIHGIIWIINDDVGATRRVAPARRVAHRVGATRRVAPTDPPRGPASGSIGAIVGQFKSIATKRINALRGTPGAPVWQRNYYEHIIRTEDALQRIREYIATNPLRWHLDRENPDEW
>NC_011831.1|WP_157044893.1|4024894_4025383_+|hypothetical-protein
MAGGGAARRGDPSGRPYTMGNPTRWGRTQWAMYRNGQRTAMGNAPRRPDANRRAVVMVGVWPVGVRHVGATRRVALTRWATHRVAPTRWATRPDGQRTTSPRREPACRGDGCGTVCGGAACRGDPVGRPNPMGNAPRRPNPMGNPTRWATHHVAPTQTGVPW
>NC_011831.1|WP_015942025.1|4042166_4043762_-|hypothetical-protein
MQLATLFGRTLRQAPAEADTLATQLLWRAGMLRTLNDGEPVLLPLGSAILRRLAAILGTAVQNDGAQEIVVPTTTTASWSDTVTALARRDIDSYRQLPQLLWSWRRRKRLATRPRGLVDMPTPTTLSWAVLALDEEQAQQHLTVTRNRLSIALHQCGLDHVAAALQAPGTVTIIVDSLAKPVATLDCPACGFRAPLEQAPLAPLPPYVGPTPTMSLVETPNANTIAALAAYLDIPTASTAKALFFTDRRDDAQRLVFAVVRGDREASLAKLAAAIGAGELTPASAEQIVACGAMPGYASPVGVHDVLVVADYTVVNGTPLVAGANRPGYHLRDVIYGRDWEATLVADIAQAVVGDPCPRCGTARIEGYGAAVGTITAPYQTALPIQDAGGQNRPLWIAGIELDLEPLIHLGVEQHHDERGIVWPAAIAPVDIHLVTIGRGEAVVTAAHTLATELRNAGWSVLIDDRDERAGVKFNDADLIGAPWRLVVSEKLLAAGQVEVRRRTEVQATVIAQAKVIAWLQGVSTTSRNKE
>NC_011831.1|WP_015942026.1|4043801_4044656_-|DUF72-domain-containing-protein
MIRIGCAVWAYPGWVGDLFPPGTRSSEFLKLYSRQFTTVEGNTTFYATPSPATVARWAAETPVGFRFCCKLPREVSHGGPLAEKLPLARAFIERMQGLGERCGPFFLQLPPGYGPTRLADLERFLAGWPTEAALAVEVRHPDWYVPVGEEPLMALLDRYRIGRVVMDVRPIRDPDDPGGALLNDARERKPDVPLRPLRGGGPTLIRYIGHPDLERNDPFLEEWAARVTEWAQTDPHMYLFMHCPDEAQSPRLGRDITARLRNRGAPIAEAEPKPNEPPAQLGLF
>NC_011831.1|WP_015942027.1|4044896_4046462_-|L-glutamate-gamma-semialdehyde-dehydrogenase
MLTPFQNEPFGNFDSGNRRAAMQRAIRHVAGQQGGTYPLVIGGEHIITERKLASINPAEPKKVVGYVSSASQEHAHQALLAADAAFRTWSRTPVSARAQVLLRAAAIMRRRKEELAAWMMHEVSKNWVEADADVAEAIDFCEWYARQALALQGERQPLVPYPGEFNELRYIPLGPGLAIPPWNFPLAITTTLTVAPIVVGNTVVLKPSPRAPVMANLLVQILEEAGLPPGVVNLVTGEDAVIGDFLVDHPLVRFIGFTGSKNVGLRIQQRAAVRQPGQNWLKRAILEMGGKDAIIVDETADLEAAATGIVVSAFGFQGQKCSACSRAIVVEQVYDQVLQRVVEKAKALRLGNPTKPETDMGAVIDQRAFDSISQYIAIGQEEGRLVCGGEVIDHELVKDGGFFINPTIFADVKPHARIAQEEIFGPVLAFIRAANFDEALAIANDTEYGLTGGLYSRSLERLERAREEFHVGNLYFNRKCTGALVGVQPFGGFNMSGTDSKAGGSDYLRLFTQPKVISERF
>NC_011831.1|WP_015942028.1|4047496_4048276_-|class-I-SAM-dependent-methyltransferase
MNQREYEYKGLMAEAWDVLRGDTSNWADRHFYLAIIQKYGQPVLDVGCGTGRLLLDYLQQGVDIDGVDNSPEMLSICQYKADQLKLRPTLYKQYLERLELPRKYKTILVPSSTLQLITELEAIELAMKRLYEHLLPGGILVASMMTLWKEGEPLESAWEKTAVRKTDGVTFRRVARAWFDPISECEHTEDVYQKIIDEQVVMEELHQRSPATRSYSQSQAKDLFEKAGFQNVRLFSEFTFDVVKSEDRLFTVIGQRPFS
>NC_011831.1|WP_015942029.1|4049600_4050638_-|site-specific-DNA-methyltransferase
MTRINTTSPFRALPAPVYTTRYGACYLGDSLDLLKRLPDDCVDLVVTSPPFALLRQKAYGNTDQSEYVEWLCRFGAEVRRVLRETGSFVLDLGGAYQRGVPVRSLYQYRVLLKMCDEVGFYLAEEFFWYNPAKLPSPIEWVNKRKIRVKDSVNTVWWFSKSEWPKADVRQVLAPYSERMKTLLKNPDAFYKPKNRPSGHDISKGFGSDNGGAIPSNLLQIPNTESNSSYLRLSKLVGIEAHPARFPAALPEFFIKLLTTEGDLVLDIFAGSNTTGKVAEQFGRRWIAMEIDAGYVAGSALRFMEHLPQSEVAACFARLSVSSRSAPVDLSGPATLFDEAKVERGT
>NC_011831.1|WP_157044930.1|4050634_4051855_-|HEAT-repeat-domain-containing-protein
MLDSDWVAFPILSADESVWSAGGLHEQRSLWRERTLTTWHVEGWINLFTVESFRCVAPKQLKPKGVSEGSEVQVKWKARFAPSSGRVVAANGGRLDYLLDNDPSKPRHFRLATDERPFLAAGDYFQLNQVLAGQVEPMTTAASRCVGGCDTGKILQMLASRERTVRFTGCKLARLARAAGLVNEVRALAEDSEEDAYVRMEAKSYLCEVAGDSADDQFRAILLGHADEQMRLEASVTLAETRTPTSFDLLRTVLEDATQPLFLRSACAWAIGCHGTRDAAQVLVQAFADVAPEIREEALIALADLGAVGFDALLRGLEASSAAIAAGAAETLRRIRGAPAKDIAALAERSSSTWPTWTLAHLSKDAVAPYVAALQSKRPDVHYAISVLWNFLESWIANDWTPRATP
>NC_011831.1|WP_157044931.1|4052265_4052985_-|type-II-restriction-endonuclease
MTMLLDPETLKHDLDRLEEIEKATLRLVTQAIYDYRETALEIFHQEGDLAADISEDITREALDRLGMPRIDQRLFGKVDYKRACYVFHPDYALKQALFVDSKAEKVGGQGTATLQLSQLSMAVKQTRSGQTVNIQGKMPTVITLRGEKYLTTTLFVKYNYDKEGGVHILKSIIVAAVPNGMLQDRYNPIPEDTIWTAGRNAPSLGEEFRVRLSFSRLKHKAAWRVQTIPMPPEPFYWSS
>NC_011831.1|WP_015942032.1|4052981_4054025_-|site-specific-DNA-methyltransferase
MSGVIEEMDFKIDRLPKGLQDTFRELYVNGNGNGTLHDVRPNEIYVGDARALLPNIEPNSIALSVWSPPYFVGKEYEAHLSFEDWQDLLRTVIHLHFPIIKPGGFLVINIADILVFKDPSMPRIQAEAVTRKRCPVTKADVLKAMAEHPDYNRYQLAKLLGCSEQTIDRRLHGNNIRGGKYESQTRVKIVGGLVEEWALSAGLYPYDRRIWVKDAAWENSRWASLSYRSVDEFEYLYFFWKPGITKFDRKRLSADEWKNWGSRGVWYVPSVRANDDHEAKFPIELPTRVIRLLTDPGDIVLDCFMGSGTTAVAAIRENRQYIGIEILEKYVNLARQRIAAEHFSTGK
>NC_011831.1|WP_049762864.1|4054190_4054619_-|DUF1917-domain-containing-protein
MKCRRMLIPSKETSQPWIYADGKGEGCYEDGQTYVGKWLVFVSHEHVDEVWERIRRAVEAGNLGISAKVSTSRPSGYKSTVHVICVYTYDFRDKADVGRVLTALRDIGITGRLYYKTDQATLSGVYAKKKQRASLYASDDFE
>NC_011831.1|WP_015942033.1|4054834_4055293_-|hypothetical-protein
METTLAGIGQVLLLLGLAVFFALVFAGVLVVLRYTARQKAASARERYPTARQIDRASFFGQESRGVVQMRGNGTLILTDSDLIFELWVPNTEFRIPLRSIQALENPTSFLGKSRLTPLLKVVYTNAQGATDAMAWQVPDLNRWMRQINGART

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Crispr_ID: NC_011831_34

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_34

4149375-4149487

Orphan

Consensus_repeat	Method
ACGGCGATGCCGTGCCCCTACGGGTGGCGTCTGTGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_34

>merge|NC_011831|34|4149375-4149487|CRISPRCasFinder
ACGGCGATGCCGTGCCCCTACGGGTGGCGTCTGTGCGCTTGATAGTAGGTGGGCTAGCGTCATTGCTAGCCCATCTACGGCGATGCCGTGCCCCTACGGGTGGCGTCTGTGCG

>NC_011831|34|30|4149375-4149487|CRISPRCasFinder
ACGGCGATGCCGTGCCCCTACGGGTGGCGTCTGTGCG	CTTGATAGTAGGTGGGCTAGCGTCATTGCTAGCCCATCT
ACGGCGATGCCGTGCCCCTACGGGTGGCGTCTGTGCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015942109.1\|4159443_4159707_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942092.1\|4131372_4132470_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_041470709.1\|4158895_4159168_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942096.1\|4134124_4134523_+\|FixH-family-protein	unknown	unknown	gnl\|CDD\|379037
NC_011831.1\|WP_015942100.1\|4146870_4148415_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|365919
NC_011831.1\|WP_015942105.1\|4153744_4154383_+\|HDIG-domain-containing-protein	unknown	unknown	gnl\|CDD\|225198
NC_011831.1\|WP_015942097.1\|4134534_4135428_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|379034
NC_011831.1\|WP_085953525.1\|4149583_4149883_+\|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197386
NC_011831.1\|WP_157044894.1\|4157203_4158886_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238625
NC_011831.1\|WP_015942098.1\|4135417_4136413_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
NC_011831.1\|WP_083768937.1\|4159298_4159427_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143393
NC_011831.1\|WP_015942099.1\|4143092_4146704_-\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NC_011831.1\|WP_015942094.1\|4133134_4133416_+\|DUF507-family-protein	unknown	unknown	gnl\|CDD\|367914
NC_011831.1\|WP_041471140.1\|4133465_4134107_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942103.1\|4149899_4150124_+\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|238219
NC_011831.1\|WP_015942101.1\|4148448_4149276_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213260
NC_011831.1\|WP_015942093.1\|4132441_4133119_+\|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl\|CDD\|376358
NC_011831.1\|WP_015942106.1\|4154379_4155714_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NC_011831.1\|WP_015942104.1\|4150209_4152759_+\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NC_011831.1\|WP_015942107.1\|4155685_4156585_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|366120

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015942103.1\|4149899_4150124_+\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|238219	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.	1.3287e-13
NC_011831.1\|WP_015942096.1\|4134124_4134523_+\|FixH-family-protein	gnl\|CDD\|379037	pfam13115, YtkA, YtkA-like.	4.51538e-17
NC_011831.1\|WP_015942100.1\|4146870_4148415_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	9.76047e-89
NC_011831.1\|WP_015942105.1\|4153744_4154383_+\|HDIG-domain-containing-protein	gnl\|CDD\|225198	COG2316, COG2316, Predicted hydrolase (HD superfamily) [General function prediction only].	1.0353e-45
NC_011831.1\|WP_015942097.1\|4134534_4135428_+\|thioredoxin-family-protein	gnl\|CDD\|379034	pfam13098, Thioredoxin_2, Thioredoxin-like domain.	6.66431e-08
NC_011831.1\|WP_085953525.1\|4149583_4149883_+\|metal-sensitive-transcriptional-regulator	gnl\|CDD\|197386	cd10151, TthCsoR-like_DUF156, Thermus thermophilus CsoR, a Cu(I)-sensing transcriptional regulator, and related domains; this domain family was previously known as part of DUF156. This domain family contains various Cu(I)-inducible transcriptional regulators including CsoR (copper-sensitive operon repressor) from Mycobacterium tuberculosis (MtCsoR), and Thermus thermophilus (TthCsoR). CsoR regulates the expression of genes involved in copper homeostasis. For example, TthCsoR binds the promoter region of the copZ-csoR-copA operon, and represses expression of these genes, which encode the copper chaperone CopZ, CsoR, and the copper efflux P-type ATPase CopA, respectively. In the presence of excess Cu(I), TthCsoR binds this ion, and is released from the DNA, allowing expression of the downstream genes. TthCsoR also senses other metal ions such as Cu(II), Zn(II), Ag(I), Cd(II) and Ni(II). MtCsoR regulates an operon that includes CsoR and a putative copper transporter gene, ctpV (cation transporter P-type ATPase). CsoRs form a homotetramer (dimer of dimers). In MtCsoR, within each dimer, two Cys residues on opposite subunits, along with a His residue, bind the Cu(I) ion (forming a triagonal S2N coordination complex, C-H-C). These residues are conserved in some but not all members of this family; for example, for TthCsoR, there is a His instead of the second Cys as well as an N-terminal His (not found in those family members having C-H-C) which may also be involved in metal binding (H-C-H-H). A conserved Tyr and a Glu residue facilitate allosteric regulation of DNA binding.	3.34112e-33
NC_011831.1\|WP_157044894.1\|4157203_4158886_+\|amidohydrolase-family-protein	gnl\|CDD\|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	4.26916e-146
NC_011831.1\|WP_015942098.1\|4135417_4136413_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	2.51194e-80
NC_011831.1\|WP_083768937.1\|4159298_4159427_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	1.38172e-07
NC_011831.1\|WP_015942099.1\|4143092_4146704_-\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.38331e-25
NC_011831.1\|WP_015942094.1\|4133134_4133416_+\|DUF507-family-protein	gnl\|CDD\|367914	pfam04368, DUF507, Protein of unknown function (DUF507). Bacterial protein of unknown function.	2.53367e-08
NC_011831.1\|WP_015942101.1\|4148448_4149276_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.06889e-102
NC_011831.1\|WP_015942093.1\|4132441_4133119_+\|class-II-aldolase/adducin-family-protein	gnl\|CDD\|376358	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain. This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.	1.10172e-53
NC_011831.1\|WP_015942106.1\|4154379_4155714_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	2.05081e-157
NC_011831.1\|WP_015942104.1\|4150209_4152759_+\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_011831.1\|WP_015942107.1\|4155685_4156585_+\|ROK-family-protein	gnl\|CDD\|366120	pfam00480, ROK, ROK family.	1.91873e-80

>NC_011831.1|WP_015942101.1|4148448_4149276_+|ATP-binding-cassette-domain-containing-protein
MAILFQETDTASSAADLRTWAIKVQGVTKHYQTRGGAVQVLAGINCTVAAGEVVALVGPSGCGKSTLLRIVTGLESPDGGVVKLFGLSPVQARREHRFGIAFQTAALLEWRDAAANVALPLELAGWSPEARKARVAELLARMGLSDAAHRLPRQLSGGMQQRVALARALALAPPILLLDEPFSALDELTREQLQGELLDLLATISPRPAVLLVTHNLTEAVLLSDRVIVLSRRPAQVLAEVSIALPRPRRADLRDDVRLHQLVAELRAVLRGNGG
>NC_011831.1|WP_015942100.1|4146870_4148415_+|aldehyde-dehydrogenase-family-protein
MSKIIAPECEWSHLMAQLRTAVPEAFNAEGHVLNLIEGTWGWPGHGKHYSTAVDGSELGRMPMIDLDTAKRAVRFAAREHETWSQTDLDERRRRVSEALVGLRQYRDLIAYLLMWEIGKPYQLACDDVDRCISGVEWYIEQIEWMMNGRRPLGLISNIASWNYPYSVLMHAVLVQTLAGNAVIAKTPSDGGLFALTLGFAIARRAGLPVSLVSGSGGALSDALVRNADIACLAFVGGKTNGRDIAASLYDRNKRYMLEMEGVNCYGIWDFSDWPNLAQQIKKGFAYGKQRCTAYIRYVVQRRLFPKFLDMYLPVVKSLQIGNPVLVDKPGDPLPRLDFGPLINAKKVEELRVLYSEALGAGAICLYDGELNPELFLPDQDISAYMAPITLLNVPRNCRLHHNEPFGPVDTIVIVDSVDELISEMNISNGNLVSSIATDDLKLGQMIAGELRAFKVGINKMRSRGDREEVFGGMGASWKGCFVGGKYLVDAVTIGAPGERLYGNFPDYTLLPEQR
>NC_011831.1|WP_015942099.1|4143092_4146704_-|CHAT-domain-containing-protein
MDRRTSLLIRPRRTNRTSNSSPTYLIDLEFGDGRRITTTDEVQLHLPPPETSDPDAISRYGQELFSRLFPGRLATSFNTTRLIAIQQQQPLRLRLAIDPQDAILQAIPWELLYLPALDAQSRPQPLATSDQVLFSRYIDSEQFPLGDPLEHRPIRMLIVLSEPSDLNRWGLATFDRKATEQDFKLRFRPFQDTGQLELEVLPVASESALRNALERGSHLSERERGFDVVLYIGHALFAPQYGTRLLLEDGSQRRGRLFDGGEFARLITQLPSTHKPTLIALVACNSATVDLHAPLSNLAARLIAESGVPAVIAMQRLVAIDLARDFTQHLTEMLLRSGLIDLAVTTARRRIYRADTLGWSTPVLYTRLSNGRLFQSSTLLSYVEWVLSQAEITRWAGDEYIDLDCITIPPGQTWQLFQYRPENSPKPISARDTILSLVSNTSTSIAPSQQLVLLTGSHQSGQTTILRRICHDLARQAQRDINAPVGVFVSLAGYEQARGDIRLYDHIIERVRQQHVEFAKTLELLFRGTTSGANSRPRCVFLLDDVDQIAESHWKDLIHDLNTVRNRLTDQRFVVAAPQAFTSLAFEQPVTILAIQPLDEPGIVAYLRQRYRRQARNIIDRIRENRLLHLASDPRMLILIVNRLAGLNQQPIVYHNIIEEFLTQELRVLDHRYQMGDVARASLYQIAWYMHWHMRDALTIGEVFTLLAEVRHNRDYNLEELFYQLGQTRLISMIGQREIYFTNQAVAAYCTAQALCRAPDRSSKLDDIVALCADVERQRWWEEALYALANLLDQPEELLSRIAKSLRNGNQRLAVIAARCLEALPPNKLQSVPLTLRNELIDNCLLHLDERREPSAERRELLVKALGKIDHPQIRQYLRQILVDKVRQTSSGPRYEYSNVRIAAARALRDLYLPDFRRLQKQKEESFDRTRITLKQLRDDRPLIELMHHWLKGEAMRQQLRDCIITSPLAPERAVAAFALADVSISPIQQACDARFLLRIITHPLDTSTTTISSEWMDTMWSAADALTLFDPEYVTPLIAALIRHKRSMPNPAAQQLAYLVGRLRIDQPFIIDWLIHLLINNPSQNVKARALQSLAWIGEGATNRSITIAEGERNNKLTIKQLIEEIALWQVPLPRFVEGEFTLEMSAASLSPIYLRRKAIEALAWIGDRNTLRELDSKCQYWPLELRTQWYISRESIQQRIR
>NC_011831.1|WP_015942098.1|4135417_4136413_-|CoA-transferase
MLDLSQTLHSISVIEIANYIPGPLCGALLAGLGARVVKIERPGGDPMRTLPPVDKTGEHPLFALLNGAKHCQTLDLRQPDALAVLHDLVRVADILIDGLRPRALDRLGLSDEVLLQLNPSLLIVSIRGAPIGHTYRAAALHDLNAQALSGMLTVGEQPPRVIGVHAADMVSGLMAASAVLAGLLARQRSGRGGRIETSMLAAARWLNTPALALAYAGLSAIDTLNGSLACYRLYQTADGRWLAVAALETHFWERMCAAIDRPDLIPLQYDRSAQHMLIETLTATFRQRSLAAWMDTFANLDACISPVLTPVEAGQEGGLSVALAVETLPRD
>NC_011831.1|WP_015942097.1|4134534_4135428_+|thioredoxin-family-protein
MLQLPLILIFTLSIAVFTTGCASQTSTPTPAAAPIAPVIAASELVVGPNRLPFGLLQGGVPLNDPNLSLNVTFYYVGPGGDRTKPVMTAQAVYRGQGLPVGLYVAYATFDRAGGWEAEIDIPQATGSQRSRIRLDVSERAFAPMVGDKAIPVRNLTAADVPSLDRLTSDPRPDPDFYRLTVAEALASGKPFVVSFATPGYCQTAVCAPNMAVLKQLKNEFGDRVNFIHIEVYPYPFGESFQQAKTVDAMHEWNLRTEPWTFLVDANGIIQARYEGGITFDELRPAIAQLAAGQPVNP
>NC_011831.1|WP_015942096.1|4134124_4134523_+|FixH-family-protein
MVAWIQRFWLIVAVVVLVACSSGAVPLRETQVVDGLEITLDTPNRPRMNTAVDFIVLLRDAQGNPVDDANVYLDLDMPAMPMGVTRPVALPDGPGRYWARTAYTMEGLWEITVVVERSSMTYRAMFHRDVLQ
>NC_011831.1|WP_041471140.1|4133465_4134107_+|hypothetical-protein
MIDDPREQTTAATDLLLAVGAYIAIWRLHGAPGWRRQVWQSAFGLLVGSSVLGAVVHGVRLSATSRERRWQPLNLLLGLVLALFATGAISDSWGKRVGQRVLPLLVIAARGFVWLSRRVQRGFLPFILYELTVMLTALVIYTDLARRRYPGARSITIGILITMLAAGIQTSSLELRIGKLPFDHNGLFHLVQLTAFPFLIEGVRATLVANPES
>NC_011831.1|WP_015942094.1|4133134_4133416_+|DUF507-family-protein
MKLSPAKVDQLATMLVDVLAETDGVLFQTSDPELRAAIREIMIDELEVEDRLNAEVHQMLQAYKYEITHGRLDYDTLFRRLRQRLIAERKIVL
>NC_011831.1|WP_015942093.1|4132441_4133119_+|class-II-aldolase/adducin-family-protein
MTTTSLTEIERALRAEMVLCGRLLYERGLIVAGDGNLSARLPDGTILMTPAGLAKGMLTTDDLVVVDRDGRLIRGETNRQPSSERYLHLFVYQHRPDIMACVHAHPPTAVGATLAGVSLAEPLLPEAQIALGPIPTAPYALTGTIEMGAAIAPFVADHEAILLAYHGALTYGATLMQAFHRMEQVEHCARILLAAHLFGGARPLPPERLAELAEVRQAFRASGRV
>NC_011831.1|WP_015942092.1|4131372_4132470_+|hypothetical-protein
MQTVSSPVRIPSTLGRPQIIFFCELEGPPLLELLAQPGVLSFLANGEYGIAVALHNLSLETAQAVALLNQHHIPVIAWLLLPAEEGFWFNLQNYPQAIERYRAVRQWALTHSLHFQAIGIDIEPPLGEVIASRRRGIRDIARRIWLAHENVLYESARAAYLDLIAEIHHDDYEVHTYQLPLIVDDRRAATTTIQRALDIIDLPADVEVLLCFSSIPLEQLGNDLGGALIDSYGPSADAIAVGCIVGSAVRSSSAEDLPPLTWDALERDLLLAAQYTDTIYLFSLEGCVERGLLPRLAQIDWVAPSRPELAKRLIVQMLRLLLFIVMLVMRFSRPLLAWSGWIVAAILLFRLRQQKRYDHHFTHRD
>NC_011831.1|WP_085953525.1|4149583_4149883_+|metal-sensitive-transcriptional-regulator
MVQQKEQFMDPERKQQILNRLKTIEGHIRGVQRMVEEDAYCIDLLNQTRAIQQALAKLDAIILANHLHSCVTTAIRSEDVGERERVLTELLQVFESTHR
>NC_011831.1|WP_015942103.1|4149899_4150124_+|heavy-metal-associated-domain-containing-protein
MVTEQFRVPGVSCQHCVHAVRKEVGALNGVVQVDVDLDNKIVTVVHSDDVEITDIVMAIKEAGYDDVTPLGIAC
>NC_011831.1|WP_015942104.1|4150209_4152759_+|copper-translocating-P-type-ATPase
MAEREIILPVTGMTCASCSARVEKALRKTPGVLSAEVNLASEQVLVRFDPAQAQPSALQAAIEQAGYGVVTDEIALAITGMTCASCSARVEKALRKTPGVLSAEVNLASEQALVRYVPGMMNRAELVKAVEQAGYGVIAPATTTGETEDVEARARAHEMALRRRRLLVGVVFGLPLFILSMARDFGLIAPWLIGEGAAMAAAMAGSAMNEIMHMVAARDDLLNWLFLALATPVQFYAGRDFYRYAWRALRMRTATMDTLIALGSSAAYFYSLAILLSGAPGHVYFETAAMIITLILVGKYLEARAKSQTSAAIKALIGLQPKTARVLRGGKEVDVPLNEVRVGEMVIVRPGEKIPVDGVIIAGESTVDESMLTGESLPVEKRIGDPVFGATINRSGSFQMRATRIGKDSALAQIVRLVQEAQGSKAPVQALVDRIAAVFVPAVIVIATLTFVGWLWAGVGLTQALIFAVAVLVIACPCALGLATPTAIMVGTGAGAAHGILIRNAEALERAASLQVVVFDKTGTITYGRPEVTDVVVVTQPVLVQHGAVELPADAALLQLAAAAESRSEHPLGVAIVQAAQARGLPIERPTRFQAVSGAGVEAEVNGQTVLIGTPVWLAERGVDVTGLAATVDQLQASGKTVIVVAADGEARGVIALADTVRPTAVAAVAELCRSGLDVALLTGDNQRTAAAIAAAVGIPTNAVYAEVKPHEKAAIVARLQQSAAGDKPRRVAMVGDGINDAPALAKADIGIAMGSGTDVAMETADITLMRSDPRGVAQAIALSRATVRTIRWNLFWAFAYNVILIPVAAGVFYPFTGWQLSPVLAAAAMAFSSVFVVSNSLRLKGVRF
>NC_011831.1|WP_015942105.1|4153744_4154383_+|HDIG-domain-containing-protein
MLTDTARQIMHEWITTDSLRKHCEAVAACMAHFAAKQGADVDLWTAVGLLHDLDFERYPHMPEAGPATTAIAEALIRGDEVPAELPGHPFYGVVYLRSTGWSPEILRAILSHADYSGILPETPLERTLYAVDELSGFVTAVALVRPDKSIHSVEVASVRKKMKDKAFAAKVSREGIVHGAEVIGMELDALIGEVIAALRAAAPHLGLAGISR
>NC_011831.1|WP_015942106.1|4154379_4155714_+|diaminopimelate-decarboxylase
MTLVPHVWPETATVVDGRLWVGGCDVVALADQFGTPLYLLDEVTLRGAMRAYRQAFAATYPGPFRVHYAGKALLNTALAQIVAQEGLGLDVVSATELLVARRAGMPMAHVHLHGNAKSDAELERALTWQVGAIVVDNLDELARLRAMSARLAEPQGVLLRIAPAIEADTHSHIATGGEAAKFGLPLAALDEAVAQTLAAPGLRWLGLHAHIGSQLFALDQVVATVEVLVSQAARLRERFGVTPVELSPGGGLGVPYTADQPSTDRFRYAQVVSEALQAACARYNLPLPRLTVEPGRSIVARAGVALYRVVGRKGRRWLNVDGGMADNIRPALYGARYSAVLANRAGEPAGEPVAVGGRYCESGDVLLREIALPPAQPGDLIAVATAGAYTLSMSSNYNLVPRPALVLVGNGRAHVIQRRETEDDVLARDVVLGGADAGTTLRRD
>NC_011831.1|WP_015942107.1|4155685_4156585_+|ROK-family-protein
MPERLYGGIEAGGTKWVCAIGTGPDDIRAETRFPTTTPDETLAQAIAFFRAHQSVPLTAIGVGSFGPIDLNRDSPRYGYITTTPKPGWSNTDVVGTLTQALGCPVGFDTDVNAALLGEWHWGAARDYDVAVYITVGTGIGGGAMVGGRLVHGLIHPEMGHIRPVRDPARDPFPGICPYHGDCLEGLACGPAIQARWQTPAEQLPPDHPAWELEADYLGQAMATLLCMLSPERIIIGGGVMSQPPMFPLVREATQRWLNGYLQHPRILDNPAELIVPPGLGARAGVLGAIALAMAAAEGY
>NC_011831.1|WP_157044894.1|4157203_4158886_+|amidohydrolase-family-protein
MTCHHVSDDRNEEYPMLLARDLAPDLILYNAVIYTLNPALPRCSAIACKDGRIVAVGDDADVLALAGPATRRIDLGGRTVIPGINDAHNHMLEMGLKLRRIGLDDCTSIAEMVERVRAVAAHTPAGQWIVGEGWNESLLRENRLPNRHDLDAATTIHPVLLKRFFNMDVVNTRALELAGVTAATPDPAGGKIERATDGTPTGILRAAAKELCRRLLPVPTQAECVEALEAAGRAYLSYGITSILDPGLQPWEIQAYLAARRAGRLPVRANLLVSWHGFRESETRDELEARAAAFGGLSGLGDEWLRIGALKMAIDGGTTSHTAWMFQPFVGEDRVYDYNRLDPEELVEFFTRGHTLGWDIGIHAIGDRAHHEAARAFAEVIAAHPREHRHNLIHGYFATEESLQHMAQHGLAVVIQPTFIYYEGDDLFRDVGPELAARYKPMRTYLDRGIRVVATSDVPSTVHFNPFIGLYALVTRKSWKGTLIAPNQAVSREEALYAYTVAGAWLTREEHLKGSLAPGMLADMAVLDRDYFACPAEEIKEIRVEMTILGGQVVYERNES
>NC_011831.1|WP_041470709.1|4158895_4159168_+|hypothetical-protein
MRQFDYRTPRHLATVAQHDYNNVARSITNLPARLLHFAQPLYDYNNITRSILKNANAMGSVPVCIASARWRPTIAANGILIDDSEWAGSV
>NC_011831.1|WP_083768937.1|4159298_4159427_+|nucleotidyltransferase-domain-containing-protein
MIQQCKAALAAYYGARFRGLILYGSMARGQAYPTSDIDLLIF
>NC_011831.1|WP_015942109.1|4159443_4159707_+|hypothetical-protein
MSELRQIIDVLYPVQLDSPWLISAKPVPVGDFEWGALQLYRYAKQEGIYGVMSDRNQEVFAYLEREEQSILATNELFSKGFYDFAAP

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Crispr_ID: NC_011831_35

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_35

4152808-4153632

Orphan

Consensus_repeat	Method
CNNNNAGCNNGAGCCGCACNGCCG	CRT

13 spacers

The CRISPR arrays of NC_011831_35

>merge|NC_011831|35|4152808-4153632|CRT
CGCACAGCCGGAGCCGCACTGCCGTGCGGCTGTACGGGGCATGGGTGCGGGAGCCGCTAGCTAGAGCCGCACGGCCGTGCGGCTAGAGGAGCCCGCCCTGCCGGAGCCGCACGGCCGGAGCCGCACGGCCGGAGCCGCACAGCCGTGCGGCTGTACGGGGCATGGGTGCGGGAGCCGCTAGCTAGAGCCGCACGGCCGTGCGGCTAGAGGAGCCCGCCCTGCCGGAGCCGCATAGCCGGAGCCGCACAGCCGGAGCCGCACAGCCGGAGCCGCACAGCCGGAGCCGCACAGCCGGAGCCCGCACAGCCGGAGCCGCACAGCCGTGCGGCTGTACGGGGCATGGGTGCGGGAGCCGCTAGCTAGAGCCGCACGGCCGTGCGGCTAGAGGAGCCCGCACAGCCGGAGCCGCCCAGCCGGAGCCGCACGGCCGGAGCCGCACAGCCGGAGCCGCCCAGCCGGAGCCGCACGGCCGGAGCCGCACAGCCGTGCGGCTGTACGGGGCATGGGTGCGGGAGCCGCTAGCTAGAGCCGCACGGCCGTGCGGCTAGAGGAGCCCGCACAGCCGGAGCCCGCCCTGCCGGAGCCGCACAGCCGGAGCCGCACAGCCGTGCGGCTGTACGGGGCATGGGTGCGGGAGCCGCTAGCTAGAGCCGCACGGCCGTGCGGCTAGAGGAGCCCGCCCTGCCGGAGCCGCACAGCCGGAGCCGCACAGCCGGAGCCGCACAGCCGGAGCCGCACAGCCGGAGCCCGCACAGCCGGAGCCGCACAGCCGTGCGGCTGTACGGGGCATGGGTGCGGGAGCCGCTAGCTAGAGCCGCACGGCCG

>NC_011831|35|5|4152808-4153632|CRT
CGCACAGCCGGAGCCGCACTGCCG	TGCGGCTGTACGGGGCATGGGTGCGGGAGCCGCTAGCTAGAGCCGCACGGCCGTGCGGCTAGAGGAGCC
CGCCCTGCCGGAGCCGCACGGCCG	GAGCCGCACGGCCGGAGCCGCACAGCCGTGCGGCTGTACGGGGCATGGGTGCGGGAG
CCGCTAGCTAGAGCCGCACGGCCG	TGCGGCTAGAGGAGCCCGCCCTGCCGGAGCCGCATAGCCGGAGC
CGCACAGCCGGAGCCGCACAGCCG	GAGCCGCACAGCCGGAGCCGCACAGCCGGAGCC
CGCACAGCCGGAGCCGCACAGCCG	TGCGGCTGTACGGGGCATGGGTGCGGGAG
CCGCTAGCTAGAGCCGCACGGCCG	TGCGGCTAGAGGAGCCCGCACAGCCGGAGC
CGCCCAGCCGGAGCCGCACGGCCG	GAGCCGCACAGCCGGAGC
CGCCCAGCCGGAGCCGCACGGCCG	GAGCCGCACAGCCGTGCGGCTGTACGGGGCATGGGTGCGGGAG
CCGCTAGCTAGAGCCGCACGGCCG	TGCGGCTAGAGGAGCCCGCACAGCCGGAGCC
CGCCCTGCCGGAGCCGCACAGCCG	GAGCCGCACAGCCGTGCGGCTGTACGGGGCATGGGTGCGGGAG
CCGCTAGCTAGAGCCGCACGGCCG	TGCGGCTAGAGGAGCCCGCCCTGCCGGAGC
CGCACAGCCGGAGCCGCACAGCCG	GAGCCGCACAGCCGGAGCCGCACAGCCGGAGCC
CGCACAGCCGGAGCCGCACAGCCG	TGCGGCTGTACGGGGCATGGGTGCGGGAG
CCGCTAGCTAGAGCCGCACGGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015942109.1\|4159443_4159707_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942099.1\|4143092_4146704_-\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NC_011831.1\|WP_041470709.1\|4158895_4159168_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942096.1\|4134124_4134523_+\|FixH-family-protein	unknown	unknown	gnl\|CDD\|379037
NC_011831.1\|WP_015942101.1\|4148448_4149276_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213260
NC_011831.1\|WP_015942105.1\|4153744_4154383_+\|HDIG-domain-containing-protein	unknown	unknown	gnl\|CDD\|225198
NC_011831.1\|WP_015942097.1\|4134534_4135428_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|379034
NC_011831.1\|WP_083768937.1\|4159298_4159427_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143393
NC_011831.1\|WP_015942110.1\|4160017_4161232_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NC_011831.1\|WP_157044894.1\|4157203_4158886_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238625
NC_011831.1\|WP_015942098.1\|4135417_4136413_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
NC_011831.1\|WP_015942112.1\|4161881_4162478_-\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NC_011831.1\|WP_015942103.1\|4149899_4150124_+\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|238219
NC_011831.1\|WP_041471140.1\|4133465_4134107_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_085953525.1\|4149583_4149883_+\|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197386
NC_011831.1\|WP_015942111.1\|4161382_4161778_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942106.1\|4154379_4155714_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NC_011831.1\|WP_015942104.1\|4150209_4152759_+\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NC_011831.1\|WP_015942107.1\|4155685_4156585_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|366120
NC_011831.1\|WP_015942100.1\|4146870_4148415_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|365919

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015942099.1\|4143092_4146704_-\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.38331e-25
NC_011831.1\|WP_015942096.1\|4134124_4134523_+\|FixH-family-protein	gnl\|CDD\|379037	pfam13115, YtkA, YtkA-like.	4.51538e-17
NC_011831.1\|WP_015942101.1\|4148448_4149276_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.06889e-102
NC_011831.1\|WP_015942105.1\|4153744_4154383_+\|HDIG-domain-containing-protein	gnl\|CDD\|225198	COG2316, COG2316, Predicted hydrolase (HD superfamily) [General function prediction only].	1.0353e-45
NC_011831.1\|WP_015942097.1\|4134534_4135428_+\|thioredoxin-family-protein	gnl\|CDD\|379034	pfam13098, Thioredoxin_2, Thioredoxin-like domain.	6.66431e-08
NC_011831.1\|WP_083768937.1\|4159298_4159427_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	1.38172e-07
NC_011831.1\|WP_015942110.1\|4160017_4161232_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	2.07657e-49
NC_011831.1\|WP_157044894.1\|4157203_4158886_+\|amidohydrolase-family-protein	gnl\|CDD\|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	4.26916e-146
NC_011831.1\|WP_015942098.1\|4135417_4136413_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	2.51194e-80
NC_011831.1\|WP_015942112.1\|4161881_4162478_-\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	1.19836e-55
NC_011831.1\|WP_015942103.1\|4149899_4150124_+\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|238219	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.	1.3287e-13
NC_011831.1\|WP_085953525.1\|4149583_4149883_+\|metal-sensitive-transcriptional-regulator	gnl\|CDD\|197386	cd10151, TthCsoR-like_DUF156, Thermus thermophilus CsoR, a Cu(I)-sensing transcriptional regulator, and related domains; this domain family was previously known as part of DUF156. This domain family contains various Cu(I)-inducible transcriptional regulators including CsoR (copper-sensitive operon repressor) from Mycobacterium tuberculosis (MtCsoR), and Thermus thermophilus (TthCsoR). CsoR regulates the expression of genes involved in copper homeostasis. For example, TthCsoR binds the promoter region of the copZ-csoR-copA operon, and represses expression of these genes, which encode the copper chaperone CopZ, CsoR, and the copper efflux P-type ATPase CopA, respectively. In the presence of excess Cu(I), TthCsoR binds this ion, and is released from the DNA, allowing expression of the downstream genes. TthCsoR also senses other metal ions such as Cu(II), Zn(II), Ag(I), Cd(II) and Ni(II). MtCsoR regulates an operon that includes CsoR and a putative copper transporter gene, ctpV (cation transporter P-type ATPase). CsoRs form a homotetramer (dimer of dimers). In MtCsoR, within each dimer, two Cys residues on opposite subunits, along with a His residue, bind the Cu(I) ion (forming a triagonal S2N coordination complex, C-H-C). These residues are conserved in some but not all members of this family; for example, for TthCsoR, there is a His instead of the second Cys as well as an N-terminal His (not found in those family members having C-H-C) which may also be involved in metal binding (H-C-H-H). A conserved Tyr and a Glu residue facilitate allosteric regulation of DNA binding.	3.34112e-33
NC_011831.1\|WP_015942106.1\|4154379_4155714_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	2.05081e-157
NC_011831.1\|WP_015942104.1\|4150209_4152759_+\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_011831.1\|WP_015942107.1\|4155685_4156585_+\|ROK-family-protein	gnl\|CDD\|366120	pfam00480, ROK, ROK family.	1.91873e-80
NC_011831.1\|WP_015942100.1\|4146870_4148415_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	9.76047e-89

>NC_011831.1|WP_015942104.1|4150209_4152759_+|copper-translocating-P-type-ATPase
MAEREIILPVTGMTCASCSARVEKALRKTPGVLSAEVNLASEQVLVRFDPAQAQPSALQAAIEQAGYGVVTDEIALAITGMTCASCSARVEKALRKTPGVLSAEVNLASEQALVRYVPGMMNRAELVKAVEQAGYGVIAPATTTGETEDVEARARAHEMALRRRRLLVGVVFGLPLFILSMARDFGLIAPWLIGEGAAMAAAMAGSAMNEIMHMVAARDDLLNWLFLALATPVQFYAGRDFYRYAWRALRMRTATMDTLIALGSSAAYFYSLAILLSGAPGHVYFETAAMIITLILVGKYLEARAKSQTSAAIKALIGLQPKTARVLRGGKEVDVPLNEVRVGEMVIVRPGEKIPVDGVIIAGESTVDESMLTGESLPVEKRIGDPVFGATINRSGSFQMRATRIGKDSALAQIVRLVQEAQGSKAPVQALVDRIAAVFVPAVIVIATLTFVGWLWAGVGLTQALIFAVAVLVIACPCALGLATPTAIMVGTGAGAAHGILIRNAEALERAASLQVVVFDKTGTITYGRPEVTDVVVVTQPVLVQHGAVELPADAALLQLAAAAESRSEHPLGVAIVQAAQARGLPIERPTRFQAVSGAGVEAEVNGQTVLIGTPVWLAERGVDVTGLAATVDQLQASGKTVIVVAADGEARGVIALADTVRPTAVAAVAELCRSGLDVALLTGDNQRTAAAIAAAVGIPTNAVYAEVKPHEKAAIVARLQQSAAGDKPRRVAMVGDGINDAPALAKADIGIAMGSGTDVAMETADITLMRSDPRGVAQAIALSRATVRTIRWNLFWAFAYNVILIPVAAGVFYPFTGWQLSPVLAAAAMAFSSVFVVSNSLRLKGVRF
>NC_011831.1|WP_015942103.1|4149899_4150124_+|heavy-metal-associated-domain-containing-protein
MVTEQFRVPGVSCQHCVHAVRKEVGALNGVVQVDVDLDNKIVTVVHSDDVEITDIVMAIKEAGYDDVTPLGIAC
>NC_011831.1|WP_085953525.1|4149583_4149883_+|metal-sensitive-transcriptional-regulator
MVQQKEQFMDPERKQQILNRLKTIEGHIRGVQRMVEEDAYCIDLLNQTRAIQQALAKLDAIILANHLHSCVTTAIRSEDVGERERVLTELLQVFESTHR
>NC_011831.1|WP_015942101.1|4148448_4149276_+|ATP-binding-cassette-domain-containing-protein
MAILFQETDTASSAADLRTWAIKVQGVTKHYQTRGGAVQVLAGINCTVAAGEVVALVGPSGCGKSTLLRIVTGLESPDGGVVKLFGLSPVQARREHRFGIAFQTAALLEWRDAAANVALPLELAGWSPEARKARVAELLARMGLSDAAHRLPRQLSGGMQQRVALARALALAPPILLLDEPFSALDELTREQLQGELLDLLATISPRPAVLLVTHNLTEAVLLSDRVIVLSRRPAQVLAEVSIALPRPRRADLRDDVRLHQLVAELRAVLRGNGG
>NC_011831.1|WP_015942100.1|4146870_4148415_+|aldehyde-dehydrogenase-family-protein
MSKIIAPECEWSHLMAQLRTAVPEAFNAEGHVLNLIEGTWGWPGHGKHYSTAVDGSELGRMPMIDLDTAKRAVRFAAREHETWSQTDLDERRRRVSEALVGLRQYRDLIAYLLMWEIGKPYQLACDDVDRCISGVEWYIEQIEWMMNGRRPLGLISNIASWNYPYSVLMHAVLVQTLAGNAVIAKTPSDGGLFALTLGFAIARRAGLPVSLVSGSGGALSDALVRNADIACLAFVGGKTNGRDIAASLYDRNKRYMLEMEGVNCYGIWDFSDWPNLAQQIKKGFAYGKQRCTAYIRYVVQRRLFPKFLDMYLPVVKSLQIGNPVLVDKPGDPLPRLDFGPLINAKKVEELRVLYSEALGAGAICLYDGELNPELFLPDQDISAYMAPITLLNVPRNCRLHHNEPFGPVDTIVIVDSVDELISEMNISNGNLVSSIATDDLKLGQMIAGELRAFKVGINKMRSRGDREEVFGGMGASWKGCFVGGKYLVDAVTIGAPGERLYGNFPDYTLLPEQR
>NC_011831.1|WP_015942099.1|4143092_4146704_-|CHAT-domain-containing-protein
MDRRTSLLIRPRRTNRTSNSSPTYLIDLEFGDGRRITTTDEVQLHLPPPETSDPDAISRYGQELFSRLFPGRLATSFNTTRLIAIQQQQPLRLRLAIDPQDAILQAIPWELLYLPALDAQSRPQPLATSDQVLFSRYIDSEQFPLGDPLEHRPIRMLIVLSEPSDLNRWGLATFDRKATEQDFKLRFRPFQDTGQLELEVLPVASESALRNALERGSHLSERERGFDVVLYIGHALFAPQYGTRLLLEDGSQRRGRLFDGGEFARLITQLPSTHKPTLIALVACNSATVDLHAPLSNLAARLIAESGVPAVIAMQRLVAIDLARDFTQHLTEMLLRSGLIDLAVTTARRRIYRADTLGWSTPVLYTRLSNGRLFQSSTLLSYVEWVLSQAEITRWAGDEYIDLDCITIPPGQTWQLFQYRPENSPKPISARDTILSLVSNTSTSIAPSQQLVLLTGSHQSGQTTILRRICHDLARQAQRDINAPVGVFVSLAGYEQARGDIRLYDHIIERVRQQHVEFAKTLELLFRGTTSGANSRPRCVFLLDDVDQIAESHWKDLIHDLNTVRNRLTDQRFVVAAPQAFTSLAFEQPVTILAIQPLDEPGIVAYLRQRYRRQARNIIDRIRENRLLHLASDPRMLILIVNRLAGLNQQPIVYHNIIEEFLTQELRVLDHRYQMGDVARASLYQIAWYMHWHMRDALTIGEVFTLLAEVRHNRDYNLEELFYQLGQTRLISMIGQREIYFTNQAVAAYCTAQALCRAPDRSSKLDDIVALCADVERQRWWEEALYALANLLDQPEELLSRIAKSLRNGNQRLAVIAARCLEALPPNKLQSVPLTLRNELIDNCLLHLDERREPSAERRELLVKALGKIDHPQIRQYLRQILVDKVRQTSSGPRYEYSNVRIAAARALRDLYLPDFRRLQKQKEESFDRTRITLKQLRDDRPLIELMHHWLKGEAMRQQLRDCIITSPLAPERAVAAFALADVSISPIQQACDARFLLRIITHPLDTSTTTISSEWMDTMWSAADALTLFDPEYVTPLIAALIRHKRSMPNPAAQQLAYLVGRLRIDQPFIIDWLIHLLINNPSQNVKARALQSLAWIGEGATNRSITIAEGERNNKLTIKQLIEEIALWQVPLPRFVEGEFTLEMSAASLSPIYLRRKAIEALAWIGDRNTLRELDSKCQYWPLELRTQWYISRESIQQRIR
>NC_011831.1|WP_015942098.1|4135417_4136413_-|CoA-transferase
MLDLSQTLHSISVIEIANYIPGPLCGALLAGLGARVVKIERPGGDPMRTLPPVDKTGEHPLFALLNGAKHCQTLDLRQPDALAVLHDLVRVADILIDGLRPRALDRLGLSDEVLLQLNPSLLIVSIRGAPIGHTYRAAALHDLNAQALSGMLTVGEQPPRVIGVHAADMVSGLMAASAVLAGLLARQRSGRGGRIETSMLAAARWLNTPALALAYAGLSAIDTLNGSLACYRLYQTADGRWLAVAALETHFWERMCAAIDRPDLIPLQYDRSAQHMLIETLTATFRQRSLAAWMDTFANLDACISPVLTPVEAGQEGGLSVALAVETLPRD
>NC_011831.1|WP_015942097.1|4134534_4135428_+|thioredoxin-family-protein
MLQLPLILIFTLSIAVFTTGCASQTSTPTPAAAPIAPVIAASELVVGPNRLPFGLLQGGVPLNDPNLSLNVTFYYVGPGGDRTKPVMTAQAVYRGQGLPVGLYVAYATFDRAGGWEAEIDIPQATGSQRSRIRLDVSERAFAPMVGDKAIPVRNLTAADVPSLDRLTSDPRPDPDFYRLTVAEALASGKPFVVSFATPGYCQTAVCAPNMAVLKQLKNEFGDRVNFIHIEVYPYPFGESFQQAKTVDAMHEWNLRTEPWTFLVDANGIIQARYEGGITFDELRPAIAQLAAGQPVNP
>NC_011831.1|WP_015942096.1|4134124_4134523_+|FixH-family-protein
MVAWIQRFWLIVAVVVLVACSSGAVPLRETQVVDGLEITLDTPNRPRMNTAVDFIVLLRDAQGNPVDDANVYLDLDMPAMPMGVTRPVALPDGPGRYWARTAYTMEGLWEITVVVERSSMTYRAMFHRDVLQ
>NC_011831.1|WP_041471140.1|4133465_4134107_+|hypothetical-protein
MIDDPREQTTAATDLLLAVGAYIAIWRLHGAPGWRRQVWQSAFGLLVGSSVLGAVVHGVRLSATSRERRWQPLNLLLGLVLALFATGAISDSWGKRVGQRVLPLLVIAARGFVWLSRRVQRGFLPFILYELTVMLTALVIYTDLARRRYPGARSITIGILITMLAAGIQTSSLELRIGKLPFDHNGLFHLVQLTAFPFLIEGVRATLVANPES
>NC_011831.1|WP_015942105.1|4153744_4154383_+|HDIG-domain-containing-protein
MLTDTARQIMHEWITTDSLRKHCEAVAACMAHFAAKQGADVDLWTAVGLLHDLDFERYPHMPEAGPATTAIAEALIRGDEVPAELPGHPFYGVVYLRSTGWSPEILRAILSHADYSGILPETPLERTLYAVDELSGFVTAVALVRPDKSIHSVEVASVRKKMKDKAFAAKVSREGIVHGAEVIGMELDALIGEVIAALRAAAPHLGLAGISR
>NC_011831.1|WP_015942106.1|4154379_4155714_+|diaminopimelate-decarboxylase
MTLVPHVWPETATVVDGRLWVGGCDVVALADQFGTPLYLLDEVTLRGAMRAYRQAFAATYPGPFRVHYAGKALLNTALAQIVAQEGLGLDVVSATELLVARRAGMPMAHVHLHGNAKSDAELERALTWQVGAIVVDNLDELARLRAMSARLAEPQGVLLRIAPAIEADTHSHIATGGEAAKFGLPLAALDEAVAQTLAAPGLRWLGLHAHIGSQLFALDQVVATVEVLVSQAARLRERFGVTPVELSPGGGLGVPYTADQPSTDRFRYAQVVSEALQAACARYNLPLPRLTVEPGRSIVARAGVALYRVVGRKGRRWLNVDGGMADNIRPALYGARYSAVLANRAGEPAGEPVAVGGRYCESGDVLLREIALPPAQPGDLIAVATAGAYTLSMSSNYNLVPRPALVLVGNGRAHVIQRRETEDDVLARDVVLGGADAGTTLRRD
>NC_011831.1|WP_015942107.1|4155685_4156585_+|ROK-family-protein
MPERLYGGIEAGGTKWVCAIGTGPDDIRAETRFPTTTPDETLAQAIAFFRAHQSVPLTAIGVGSFGPIDLNRDSPRYGYITTTPKPGWSNTDVVGTLTQALGCPVGFDTDVNAALLGEWHWGAARDYDVAVYITVGTGIGGGAMVGGRLVHGLIHPEMGHIRPVRDPARDPFPGICPYHGDCLEGLACGPAIQARWQTPAEQLPPDHPAWELEADYLGQAMATLLCMLSPERIIIGGGVMSQPPMFPLVREATQRWLNGYLQHPRILDNPAELIVPPGLGARAGVLGAIALAMAAAEGY
>NC_011831.1|WP_157044894.1|4157203_4158886_+|amidohydrolase-family-protein
MTCHHVSDDRNEEYPMLLARDLAPDLILYNAVIYTLNPALPRCSAIACKDGRIVAVGDDADVLALAGPATRRIDLGGRTVIPGINDAHNHMLEMGLKLRRIGLDDCTSIAEMVERVRAVAAHTPAGQWIVGEGWNESLLRENRLPNRHDLDAATTIHPVLLKRFFNMDVVNTRALELAGVTAATPDPAGGKIERATDGTPTGILRAAAKELCRRLLPVPTQAECVEALEAAGRAYLSYGITSILDPGLQPWEIQAYLAARRAGRLPVRANLLVSWHGFRESETRDELEARAAAFGGLSGLGDEWLRIGALKMAIDGGTTSHTAWMFQPFVGEDRVYDYNRLDPEELVEFFTRGHTLGWDIGIHAIGDRAHHEAARAFAEVIAAHPREHRHNLIHGYFATEESLQHMAQHGLAVVIQPTFIYYEGDDLFRDVGPELAARYKPMRTYLDRGIRVVATSDVPSTVHFNPFIGLYALVTRKSWKGTLIAPNQAVSREEALYAYTVAGAWLTREEHLKGSLAPGMLADMAVLDRDYFACPAEEIKEIRVEMTILGGQVVYERNES
>NC_011831.1|WP_041470709.1|4158895_4159168_+|hypothetical-protein
MRQFDYRTPRHLATVAQHDYNNVARSITNLPARLLHFAQPLYDYNNITRSILKNANAMGSVPVCIASARWRPTIAANGILIDDSEWAGSV
>NC_011831.1|WP_083768937.1|4159298_4159427_+|nucleotidyltransferase-domain-containing-protein
MIQQCKAALAAYYGARFRGLILYGSMARGQAYPTSDIDLLIF
>NC_011831.1|WP_015942109.1|4159443_4159707_+|hypothetical-protein
MSELRQIIDVLYPVQLDSPWLISAKPVPVGDFEWGALQLYRYAKQEGIYGVMSDRNQEVFAYLEREEQSILATNELFSKGFYDFAAP
>NC_011831.1|WP_015942110.1|4160017_4161232_-|FAD-binding-oxidoreductase
MLTSHWHATLDRPPLPVIDLPSTAEVVVVGAGVVGATTALWLTRAGLRPLVIDRSGPAAGATGHNGGILAAGLAENYLAATARYGHDTARALYALSLTGQRLMVELIEQEQIDCDLRLHGNLNFALGEAQLSIAAATVASLHADEFPATLLDRTAAQEFVRIPLGAAVSGARFNPAAGTVHSGKLVYGLLAAAQRYGAHVSWGATLQQIVTADGSLRLVTDRGTITTPAAVIAVNAWSGEVLPELAAHIKPVRGQVLCTVPVEPFITCGFGASLTATGEYGQQLPGGQVLFGGCRAIAPNHDVGVPPGDVSPDVQNALETGLGRLFPTLAGIAIERRWSGPMAFTADYLPIVTQPATGLFAIGGFSGHGMPFAAIVGRYLAEAVQTGTLPAALALLGMERATLL
>NC_011831.1|WP_015942111.1|4161382_4161778_-|hypothetical-protein
MRRDVDATQLNLSPGVRVIILLVTMTIIAVAGIFLWQATTNRQRQLVFEIPPGTAARLAAGEEVNIFPSTIVIDLRQYDTLVIQNNDTAEVTIGPFRIVPGQRFVQRYWGPGVYELICSVHQGEQLRIEVR
>NC_011831.1|WP_015942112.1|4161881_4162478_-|SCO-family-protein
MQRWFLRFIVLIAALVLSGCTAYEFRGTVLEPPNPAPELPLTDQFGRDFRLSDYRGKVVLLFFGFTHCPDICPTALGDLKRVMEKLGNNAEKVQVVFVSVDPERDTPDLMQRYLASFNPTFLGLNGDRVILEQAYKDYGVTVIRRDLPNSGLGYTIDHSGYIYAIDQVGNWRLLWAHGTPVDDIVSDVQALLRNPPRS

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Crispr_ID: NC_011831_36

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_36

4163755-4163838

Orphan

Consensus_repeat	Method
CAATTCGCTCTCCGCTCATTCGTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_36

>merge|NC_011831|36|4163755-4163838|CRISPRCasFinder
CAATTCGCTCTCCGCTCATTCGTCCTGCTGCATTTGCAACGCCTGCCTTCACGATGACACAATTCGCTCTCCGCTCATTCGTCC

>NC_011831|36|31|4163755-4163838|CRISPRCasFinder
CAATTCGCTCTCCGCTCATTCGTCC	TGCTGCATTTGCAACGCCTGCCTTCACGATGACA
CAATTCGCTCTCCGCTCATTCGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015942109.1\|4159443_4159707_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942116.1\|4166140_4166533_-\|DUF3592-domain-containing-protein	unknown	unknown	gnl\|CDD\|378822
NC_011831.1\|WP_041470709.1\|4158895_4159168_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942111.1\|4161382_4161778_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942119.1\|4168946_4169777_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_083768937.1\|4159298_4159427_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143393
NC_011831.1\|WP_157044896.1\|4163931_4164096_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942123.1\|4171655_4172126_-\|DUF1801-domain-containing-protein	unknown	unknown	gnl\|CDD\|378058
NC_011831.1\|WP_157044897.1\|4170806_4171136_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378192
NC_011831.1\|WP_015942110.1\|4160017_4161232_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NC_011831.1\|WP_157044894.1\|4157203_4158886_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238625
NC_011831.1\|WP_015942118.1\|4168419_4168950_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369261
NC_011831.1\|WP_015942113.1\|4162686_4163259_-\|copper-chaperone-PCu(A)C	unknown	unknown	gnl\|CDD\|377298
NC_011831.1\|WP_015942120.1\|4169781_4170810_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942122.1\|4171059_4171530_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_041471143.1\|4164931_4166107_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225910
NC_011831.1\|WP_157044895.1\|4163327_4163699_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942112.1\|4161881_4162478_-\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NC_011831.1\|WP_015942117.1\|4166677_4168405_-\|asparagine-synthase	unknown	unknown	gnl\|CDD\|273676
NC_011831.1\|WP_015942107.1\|4155685_4156585_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|366120

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_083768937.1\|4159298_4159427_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	1.38172e-07
NC_011831.1\|WP_015942112.1\|4161881_4162478_-\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	1.19836e-55
NC_011831.1\|WP_157044897.1\|4170806_4171136_-\|hypothetical-protein	gnl\|CDD\|378192	pfam09490, CbtA, Probable cobalt transporter subunit (CbtA). This entry represents a family of proteins which have been proposed to act as cobalt transporters acting in concert with vitamin B12 biosynthesis systems. Evidence for this assignment includes 1) prediction of five transmembrane segments, 2) positional gene linkage with known B12 biosynthesis genes, 3) upstream proximity of B12 transcriptional regulatory sites, 4) the absence of other known cobalt import systems and 5) the obligate co-localization with a small protein (CbtB) having a single additional transmembrane segment and a C-terminal histidine-rich motif likely to be a metal-binding site.	0.00176981
NC_011831.1\|WP_015942110.1\|4160017_4161232_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	2.07657e-49
NC_011831.1\|WP_157044894.1\|4157203_4158886_+\|amidohydrolase-family-protein	gnl\|CDD\|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	4.26916e-146
NC_011831.1\|WP_015942118.1\|4168419_4168950_-\|hypothetical-protein	gnl\|CDD\|369261	pfam07202, Tcp10_C, T-complex protein 10 C-terminus. This family represents the C-terminus (approximately 180 residues) of eukaryotic T-complex protein 10. The T-complex is involved in spermatogenesis in mice.	0.000952107
NC_011831.1\|WP_041471143.1\|4164931_4166107_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225910	COG3375, COG3375, Uncharacterized conserved protein [Function unknown].	7.53934e-14
NC_011831.1\|WP_015942113.1\|4162686_4163259_-\|copper-chaperone-PCu(A)C	gnl\|CDD\|377298	pfam04314, PCuAC, Copper chaperone PCu(A)C. PCu(A)C is a periplasmic copper chaperone. Its role may be to capture and transfer copper to two other copper chaperones, PrrC and Cox11, which in turn deliver Cu(I) to cytochrome c oxidase.	3.68567e-39
NC_011831.1\|WP_015942116.1\|4166140_4166533_-\|DUF3592-domain-containing-protein	gnl\|CDD\|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	1.7233e-13
NC_011831.1\|WP_015942117.1\|4166677_4168405_-\|asparagine-synthase	gnl\|CDD\|273676	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family].	9.24089e-76
NC_011831.1\|WP_015942123.1\|4171655_4172126_-\|DUF1801-domain-containing-protein	gnl\|CDD\|378058	pfam08818, DUF1801, Domain of unknown function (DU1801). This large family of bacterial proteins is uncharacterized. They contain a presumed domain about 110 amino acids in length.	2.39848e-06
NC_011831.1\|WP_015942107.1\|4155685_4156585_+\|ROK-family-protein	gnl\|CDD\|366120	pfam00480, ROK, ROK family.	1.91873e-80

>NC_011831.1|WP_157044895.1|4163327_4163699_-|hypothetical-protein
MMFVHSISNTAPLRLSRSVILWILAFLIGPWPALSCIIHCHYLPHTDSAGVEFFLCDAPHTAAQHDLPPPPVRYDLWPLGLMIVIGGLVVIQRFIATRPVMRSSAILTPDPPPPRRMHFQPAS
>NC_011831.1|WP_015942113.1|4162686_4163259_-|copper-chaperone-PCu(A)C
MRRLLMLLALAMMVVGLAGCGASQSGTQSTSQSGTQTGGITVRDPWVRAAMMNMAGDQSGAMGNMQQSNMQSTPMAGMQDHGNMAGSAVSAAYMVVVNNSNTADAIVKADSDVAKSVELHNVIMENNVMQMRQVEAIEVPANGQVELKPGGYHVMLIGLNRDLKEGEEVLIKLTTRSGQTIEVKAPVRKP
>NC_011831.1|WP_015942112.1|4161881_4162478_-|SCO-family-protein
MQRWFLRFIVLIAALVLSGCTAYEFRGTVLEPPNPAPELPLTDQFGRDFRLSDYRGKVVLLFFGFTHCPDICPTALGDLKRVMEKLGNNAEKVQVVFVSVDPERDTPDLMQRYLASFNPTFLGLNGDRVILEQAYKDYGVTVIRRDLPNSGLGYTIDHSGYIYAIDQVGNWRLLWAHGTPVDDIVSDVQALLRNPPRS
>NC_011831.1|WP_015942111.1|4161382_4161778_-|hypothetical-protein
MRRDVDATQLNLSPGVRVIILLVTMTIIAVAGIFLWQATTNRQRQLVFEIPPGTAARLAAGEEVNIFPSTIVIDLRQYDTLVIQNNDTAEVTIGPFRIVPGQRFVQRYWGPGVYELICSVHQGEQLRIEVR
>NC_011831.1|WP_015942110.1|4160017_4161232_-|FAD-binding-oxidoreductase
MLTSHWHATLDRPPLPVIDLPSTAEVVVVGAGVVGATTALWLTRAGLRPLVIDRSGPAAGATGHNGGILAAGLAENYLAATARYGHDTARALYALSLTGQRLMVELIEQEQIDCDLRLHGNLNFALGEAQLSIAAATVASLHADEFPATLLDRTAAQEFVRIPLGAAVSGARFNPAAGTVHSGKLVYGLLAAAQRYGAHVSWGATLQQIVTADGSLRLVTDRGTITTPAAVIAVNAWSGEVLPELAAHIKPVRGQVLCTVPVEPFITCGFGASLTATGEYGQQLPGGQVLFGGCRAIAPNHDVGVPPGDVSPDVQNALETGLGRLFPTLAGIAIERRWSGPMAFTADYLPIVTQPATGLFAIGGFSGHGMPFAAIVGRYLAEAVQTGTLPAALALLGMERATLL
>NC_011831.1|WP_015942109.1|4159443_4159707_+|hypothetical-protein
MSELRQIIDVLYPVQLDSPWLISAKPVPVGDFEWGALQLYRYAKQEGIYGVMSDRNQEVFAYLEREEQSILATNELFSKGFYDFAAP
>NC_011831.1|WP_083768937.1|4159298_4159427_+|nucleotidyltransferase-domain-containing-protein
MIQQCKAALAAYYGARFRGLILYGSMARGQAYPTSDIDLLIF
>NC_011831.1|WP_041470709.1|4158895_4159168_+|hypothetical-protein
MRQFDYRTPRHLATVAQHDYNNVARSITNLPARLLHFAQPLYDYNNITRSILKNANAMGSVPVCIASARWRPTIAANGILIDDSEWAGSV
>NC_011831.1|WP_157044894.1|4157203_4158886_+|amidohydrolase-family-protein
MTCHHVSDDRNEEYPMLLARDLAPDLILYNAVIYTLNPALPRCSAIACKDGRIVAVGDDADVLALAGPATRRIDLGGRTVIPGINDAHNHMLEMGLKLRRIGLDDCTSIAEMVERVRAVAAHTPAGQWIVGEGWNESLLRENRLPNRHDLDAATTIHPVLLKRFFNMDVVNTRALELAGVTAATPDPAGGKIERATDGTPTGILRAAAKELCRRLLPVPTQAECVEALEAAGRAYLSYGITSILDPGLQPWEIQAYLAARRAGRLPVRANLLVSWHGFRESETRDELEARAAAFGGLSGLGDEWLRIGALKMAIDGGTTSHTAWMFQPFVGEDRVYDYNRLDPEELVEFFTRGHTLGWDIGIHAIGDRAHHEAARAFAEVIAAHPREHRHNLIHGYFATEESLQHMAQHGLAVVIQPTFIYYEGDDLFRDVGPELAARYKPMRTYLDRGIRVVATSDVPSTVHFNPFIGLYALVTRKSWKGTLIAPNQAVSREEALYAYTVAGAWLTREEHLKGSLAPGMLADMAVLDRDYFACPAEEIKEIRVEMTILGGQVVYERNES
>NC_011831.1|WP_015942107.1|4155685_4156585_+|ROK-family-protein
MPERLYGGIEAGGTKWVCAIGTGPDDIRAETRFPTTTPDETLAQAIAFFRAHQSVPLTAIGVGSFGPIDLNRDSPRYGYITTTPKPGWSNTDVVGTLTQALGCPVGFDTDVNAALLGEWHWGAARDYDVAVYITVGTGIGGGAMVGGRLVHGLIHPEMGHIRPVRDPARDPFPGICPYHGDCLEGLACGPAIQARWQTPAEQLPPDHPAWELEADYLGQAMATLLCMLSPERIIIGGGVMSQPPMFPLVREATQRWLNGYLQHPRILDNPAELIVPPGLGARAGVLGAIALAMAAAEGY
>NC_011831.1|WP_157044896.1|4163931_4164096_+|hypothetical-protein
MLNSIKLLELAGFTKRAYLEIARRYLFSCRCNEQQLAECSPALTTAALQWLIRE
>NC_011831.1|WP_041471143.1|4164931_4166107_-|GNAT-family-N-acetyltransferase
MRLIARFLNPADPAWHGIIDQLWQQLGAPHNPELLPPHFVKSTFLRMGGIVVTFHDDRRLVGVGLLFPRAIQPDGTRMYTLRLHELDQNLPDDLIQTTLHPIPVTIYRPRDGITFAPPAPRPTGIWIGPPQADDLPAIAALYRAVWNSQPYPADLFSTEFGAATALVATVDNRLVGFLLGFWRFGALPDTPDELAIESQVMAVDPAYRTYGLATRLKRAQAHAALACGVRCLHWTVDPLQLPNALLNFNRLHAIATEFVSGYYPVFNALNQVSASRFIITWLPASTHGRVGLVDGGERPALTDLPGVAILNDGPHPRPAPAHPPFIAIAIPSDWSALQHRDRALAHTWRTTTDAIFGEWVGWERYVIYTVAYDASGQPYLIGKPDGSWMWE
>NC_011831.1|WP_015942116.1|4166140_4166533_-|DUF3592-domain-containing-protein
MPATEVVVGSEAQRTASSTSAASTSGRWMALATLLCFTVLALAMLVALWRMHTTMRAGMAAAAGIVVGAVQYDDGEINLFYPMVEFQTAAGETIRFRGNIGTAFVPPYKVGNRVKVYYNPAQPRSAIIDR
>NC_011831.1|WP_015942117.1|4166677_4168405_-|asparagine-synthase
MSRFFALINDPAGQTTAHRLAAADCEQTDDCLLAGIPDQRPWLSAGPYRYHRLVGAGEVTLFNRVDLLAWLADPSSATLSDGELLLALIDRGGLAALAQVEGMFAFAVWDGRHLTLIRDPVGARTLFYTRAGTAWAAASTLHILRRWPALQPRLNLTAVASFLTFAYLPGAETLLAGVYELLPGQYVRLAPDGSWSSGFYWMPREETALAPAATHAHQLRQTLEHVTRAMLPAGEPVGVLLSGGVDSSLVTALAARLHDAPIQTYSISFGDELPNELAYSGLVATHCSTRHQVLTVSGQQIADHLPETVAALDCPVGDPLTTPNLLLARAAAGDGLRIILNGEGGDPCFGGPKNLPMLAMEWQRPDLTPQQRAQIYLRSYRKCYDELPRLLHPDAQQELAGTSPLTERVIHYLHAPTISSYLNRLLLTNVRTKGAHHILTKVERITAACGLEGRAPLFSRAIVAQSFTIPPELKLAGTREKWILKQAVADLLPPQIIERPKSGMRVPVQHWLRGPLRELAADTLLSPRARSRSLFQTNTIQAWMAGKGMVWPRQGIALWMLVTLELWLRAFVDGA
>NC_011831.1|WP_015942118.1|4168419_4168950_-|hypothetical-protein
MSYDPNRQYEVVRYRDELLPDQSVRRIYSNGVTEWRRRLPDGTVAWQDSRGQHGTDELLGEGIVKRVANGRVFYGKEQGYGRTAWMIDGRPTVTVNETSFGGRLGEMLTMVGLTGMMGAIVWPPLMLSPEEEQQLRAAAQQQSSIGSVGSDTGSTSSTSTWSSDSGDGGNADSDFG
>NC_011831.1|WP_015942119.1|4168946_4169777_-|hypothetical-protein
MHAITTLALQRSIAQLEQAGAHYTEAQLFYAVCYTVLAPLRAALGKLRVALTLPPPLSPTAVAGGLRHWIDRHGVPVGLLPANPSLVSAAAPHTTTELDHYGLPQVLVCQDAAIAAMLRANAFDLELACPVFTVHDWPLLEAIIAALHRANRPRILVLHNASADGLALAGQLTATAPSAIPVQPIGLRPRHAKALRLCAHRRLPPSTLSALAMVDDEARWLRRGWQADVAAVYPIQLLRSLRAIVYATPQPISWRERWRYFVHSGFMSWPAWKEAV
>NC_011831.1|WP_015942120.1|4169781_4170810_-|hypothetical-protein
MKCPHCYAELRYRERSNRTCSKCRQQFVLEPKANTFKLHDLGLRELLNRLSQNGTIRLTSEQVLGALLRRQQAKTNGFPCGLYILATIVTAFLFGIINVTLDLPAFFIIIPVMFAWIITGYLATRISYSPRLPSLSNFEETILRPWSLKYGRPPWLIMNDETIALSMMQPLIHPNAVNVAILCPSAAVRAFIVANELPRRFGMIALPPVINAAQEPWLRAVRERRVPVYVLHEASLHGCLLVHDVYQLWQLPVDHPVIDLGINPHDILEVKKKESLLLKVKPDAELVNKVMTFTRLKPIEVDWLKKGNVAPLYGLPPARLLAMLIAGGKAGQLGFTSWPKAA
>NC_011831.1|WP_157044897.1|4170806_4171136_-|hypothetical-protein
MIPHTFNNRAGKPLLLLIANTGMGLDHEDYAITAAQAEARAHHAHDHHHHHHNHHEHEQSVDFAQLAAVLRRMEQTLPQMQAHHRLKWRERLAMRLRWLATQLERGATE
>NC_011831.1|WP_015942122.1|4171059_4171530_-|hypothetical-protein
MSHQLIDNLQRILPVGASILVTDSDGSLLTIRRHCVQPLDPERDNDLLPFIDQGHVARYLIGSAATSDHNPTNATYKLGVVAAHRGFTPHAYGAEHFVFSTGYAACGLYDAERDDIVTVPLTPGMMLQYSGDDTAYVQQSGRQASAAVDCQHRDGP
>NC_011831.1|WP_015942123.1|4171655_4172126_-|DUF1801-domain-containing-protein
MARSKRAGDGEQDGFSAEERAAMHERAQELKATARRRRPAKQEEEARAVLAKIAELPEPERTIFTRLHTIITANAPTLAPRLWYGMPAYAKDDKVICFIQSAQKFNTRYTTLGFSDGALLDDGAMWPTAFAITELTPAAEAQIAALVRRAVGEVAE

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Crispr_ID: NC_011831_37

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_37

4194733-4201805

TypeIII-A

Consensus_repeat	Method
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	PILER-CR
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CRISPRCasFinder
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CRT

91 spacers

cas2,cas1,cas6,csx1,csm5gr7,csm4gr5,csm3gr7,csm2gr11

The CRISPR arrays of NC_011831_37

>merge|NC_011831|37|4194733-4201805|PILER-CR,CRISPRCasFinder,CRT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTGATACCGTACGATATACGGTGTACAAGATAATGTACAAGATCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCCAGATACCGGGGGCACTGTTGACCTCGAACACAAGTACCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCGCGGTAGCCGTCCATTGCAAAAATGCCGTAGTGCGTCTTTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTCTAGAACTCCACCAGAGCTTGCTCCGCCATGCGGATAAGCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTGTACAGTATGTACACTGTACGTACACCAACAAATACTTGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGAAAGAGCTACGGAACAAGCTATACTCCTTTGATATTGGTGACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCCAGACTGGAAGCTGCCATCCCAAAAGCGGCAACGTTTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCAATATCAAACGAGACACTGCCGACCTCCTCGTTATCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCGGTTTGTACGCGACCACTCATCGAGTACTCGTTGGATACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACATGGGAGGATCGATCGCAGTCTTACTAAAACGACCCCATCCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTTAAAGAAGCCGTTCTGCAGGGTACCGACCTCTATAAAGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGGCAGGAACGCCGTTTACGACCGTGTACACCGACACTTCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCGGTATGATCCGGCAACGAATGTATCCGTTACTGGATCGTCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCGGTATTATCCATACCGTTGACAAACAGGGCATATGCCTGCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTGGAGATGGCCGCACCATACAAGTGCGGCCATCTCCAGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTCATATGTCCCTGCTTGCAACAAACTGCCTGACTCCGACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCTGAGAGCCAGCCCTGACGTCCTTTCTCCCTCAGTGAGGCAACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCACCATTCCGTCTCGCCCCCGCAACCGACGGAGCATCCCACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCGACGGTTATGTCGTGGATATTAAAACGGGAAAGCGAGTAGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGTAGCGCAAACGGTGGTTGGATGGGCTGCACCCATACGTCGAGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTTGTGCTGGAGCGCGAGTTGGAGCAAATGTACATTCCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTGATGATGTCGTCGAAGTAATCGAGTTATAAAAAAAGAAGGAGGACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTCGTTTGTTAGCGATACCGTTGTCGACCAAGCAGACCAACTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCGATGGTCAAGGCTCTATGTAAGGAAGTCCCTAGCGCCTTACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGTACCGCGATGCGTGGTGGTGGTTATTGCTGCTTTTTGCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGCTATCATTCTTTGGAGATCACCGGCGAGCAACTCCTGCTTTTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGGTATTTGTAATTGTTTTCGCTAAGCCGGAAATTGATTTACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGTTGACGAGGGCTGCACGGCTGGAAGCCGGAGTCTCTCCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGCGGTTGAGGAAGTACCTCCTCATACTGTGCTCGCGTTCCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGACAGAATACCGACACACCGGTTCGACCGCTGGTGAAACCGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGCGATCAGATAACAGTGTTCGGAGAGCCGGATTACCTTTGCCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGTCGAAAACAGAGACCGCGTTGCTAAACGCGGTCAAGGCACTCACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGAGGCGAGAGACATCGAGGTGAGGGGAACGAGTATCTGTATACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGTCATCATCAACCGCATTGCTGATTCGGATCATTGTTTGCATCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGACACACATCGCCCTTTTATACCCGCCGACACTCATTCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGTTGAACACCGTCCGGTTGTTGGCGGTAGCCGTCACCGTGTCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGACTCTTCGGTTGTCAGATATGACCACGGCGGCATCATACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGCAACGTCTCTGCCACGCAGTGCGGAGATACGTCGATGTTAACACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGCGCCTGCACACTAAACCCGACACCACATCCCAACATGAGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGCCTTGTCAGCCGTCCATGGGTGGCTGGCCGTGGTGAGCCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACATATTATCCCACTCAAGGTCAAGCAACGCCTTGTTCCACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGATCAGATGAATCAACTTAAGATACTGGTGTATGCTCCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGAACAAAGTCACGATTGCAGCAGACCAGAAACCTGCTGCAACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACACATGCTGCTGCTCAACCGCGCAGCGGAGTATGCTGCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACACACCGGCACAGCGGGTCGCACAGAACCGTCATGGGTACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGCTTCATTGCTACTGGCCACGACGTGGACGGCCTTGTCAGCCGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGGTGTTACTGATCATGATTGCCGTTTGCATCGTTTTTTCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGCGGCAGGACGTACCGGCAGAACGTACCGACAATACAAGAACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGTTCAACGGTGCTCGTTCTGCCCACCGTATTGCCCCTTTCGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGGGAAGTACTCGGCGCGCGCCTCCATGATGGCTTCCAACGGGTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGTGCAGACGCACGTCGGTGGTTGGTACGGCTTACCGTTTCTGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGTACTGCACTATCCTATGCTCCTCGTGTAGACGAGAAGCACAGGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGAACACCGGTGAAAAAACCCGCATGTGCGCGGTATACGTTGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACAATAACTTGATGAGCGTCTGGCGACGCTCATCATTGCGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTGACTAATGCTGTCACGCTCGTTATCGATCACGCCGCTGTGCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGAAAAATTATTGTTATCGTCGCATCCATATTATTATCGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGTTAGTTGAGAGATTGGCTGCCCCGGAAGGGCGTAGTCGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCCAATAAAAAAACGGTATTTACTGCTTCCATACCGGTATCCTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTTATTGCCAGCCGGTCAAATTCGGCAAGCACATCTTCAATCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCCGTACTTCACGGGGCGACCGACCACAAGGTCGGTTTTTGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCGGCTTCTTTGTAATCGACCGATACCGATCCATCACAACATGAACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACACGACACAATGTCGACGCATCCCCCACCATTACCCCGCGTGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGTACGTTATCGCGTGGTTGACGGTAGGACTGTTGGTGTACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGTTTGAATAAGGGGCATCTGTAAAAAGTCCCCCAGCGCCGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGAGGCATGGCAGATACTCGATAGACGGACGTTTATGACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTGAAAACAATTGACTTGACAAGTAATTTGACAAAAAAGACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCTGATCCGTTACCAGTGTCCAACCGTTGACACTGGTATTTGTCACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACACCGCGATGGCGGCACTCATCGCGGTTACGATCGGTTTTTACTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTTATTACGGAACAAACCATGCGTCGAAAAACCGATGTCCTGTAGACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCCCGGTCTGGGTACGCTAAGACCACAAACATTGAGACATTATCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTTTATTTCTTATAGTCCTTTAGCGTCTCCCTCCAGTTTGGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAGATCATAAATTGTTGTAGCGACCGGAAATATCCGGTCTAACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCCGAACGTATGTTGTTGCAAGCACCTCGCTTGCCTTTGTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTGTATACGCTATCGTTGCGGGTGTACCGATCACGCCTTTCGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGCAAACACCCGCATATTCGCGGTATACGTTGTCATATCGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTATCATGTCTCGTAATAAAAGTGATACCTGCCACCTCAAACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGCTGCGTAATTATGTTGAAGTACTCGGCGCAAGCGGTATCCGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCCCTGCGTTTTTTGTCACTATGTATACATCGGAGTCGGTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGACTCATCAACACATAAAGATCGGGGTCTGGTGAGCGGGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGCATCTTTGAGCGCCTTGACGGCGCCCAAAAGTGCCTTTTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTTCCTATTCTTATCGGGTTCTACGACTTTGACCGTTTCTCCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACAAGAAGGCACTGGATACATTTTTACTCCAGCCGGTTAAGTTTGGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCTTCTCGGTGCTCCGGTAGAGTACTTGTTACCAATGCCTCGGCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCTTTCTCATCGCTGGCCACAACGTGGACGGCTTTACTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACAGATATGGCATTCGCCGTCTTGTATTGGTAACATACTTAGCCCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACGGACGTTCTCCAAACGCGCATGAGACACAACCCATCAACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCTTGCACAATCGACTGCTCCAATGTGGCGTCTGGGTACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACTAAGCTTTCGTTGACGTTGGAATATCGGTATAAGATAACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCTGCCGTCTCCGGCTCCTGCGCCGCTGCCTGTGCTAAGGCACCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAATGCCGATATTGTTGCCTCCTATACACCTGGGTCGTTTGTCTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAACCAAACGGCAGGAACACCGTTTGCAATTGTTTGTACCGTTGCCTTCAAAACACCAAAATCCCCGTGATTAATTTGTCGG

>NC_011831|37|6|4194733-4201726|PILER-CR
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGATACCGTACGATATACGGTGTACAAGATAATGTACAAGATC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCAGATACCGGGGGCACTGTTGACCTCGAACACAAGTACC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGCGGTAGCCGTCCATTGCAAAAATGCCGTAGTGCGTCTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTCTAGAACTCCACCAGAGCTTGCTCCGCCATGCGGATAAGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGTACAGTATGTACACTGTACGTACACCAACAAATACTTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGAAAGAGCTACGGAACAAGCTATACTCCTTTGATATTGGTGA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCAGACTGGAAGCTGCCATCCCAAAAGCGGCAACGTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCAATATCAAACGAGACACTGCCGACCTCCTCGTTAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGGTTTGTACGCGACCACTCATCGAGTACTCGTTGGATAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CATGGGAGGATCGATCGCAGTCTTACTAAAACGACCCCATCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTAAAGAAGCCGTTCTGCAGGGTACCGACCTCTATAAAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGGCAGGAACGCCGTTTACGACCGTGTACACCGACACTTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGGTATGATCCGGCAACGAATGTATCCGTTACTGGATCGTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGGTATTATCCATACCGTTGACAAACAGGGCATATGCCTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGGAGATGGCCGCACCATACAAGTGCGGCCATCTCCAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTCATATGTCCCTGCTTGCAACAAACTGCCTGACTCCGA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTGAGAGCCAGCCCTGACGTCCTTTCTCCCTCAGTGAGGCAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCACCATTCCGTCTCGCCCCCGCAACCGACGGAGCATCCCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGACGGTTATGTCGTGGATATTAAAACGGGAAAGCGAGTAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGTAGCGCAAACGGTGGTTGGATGGGCTGCACCCATACGTCGAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTGTGCTGGAGCGCGAGTTGGAGCAAATGTACATTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGATGATGTCGTCGAAGTAATCGAGTTATAAAAAAAGAAGGAGGA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTCGTTTGTTAGCGATACCGTTGTCGACCAAGCAGACCAACT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGATGGTCAAGGCTCTATGTAAGGAAGTCCCTAGCGCCTTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGTACCGCGATGCGTGGTGGTGGTTATTGCTGCTTTTTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGCTATCATTCTTTGGAGATCACCGGCGAGCAACTCCTGCTTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GGTATTTGTAATTGTTTTCGCTAAGCCGGAAATTGATTTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTTGACGAGGGCTGCACGGCTGGAAGCCGGAGTCTCTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCGGTTGAGGAAGTACCTCCTCATACTGTGCTCGCGTTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GACAGAATACCGACACACCGGTTCGACCGCTGGTGAAACCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCGATCAGATAACAGTGTTCGGAGAGCCGGATTACCTTTGCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTCGAAAACAGAGACCGCGTTGCTAAACGCGGTCAAGGCACTCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GAGGCGAGAGACATCGAGGTGAGGGGAACGAGTATCTGTATAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTCATCATCAACCGCATTGCTGATTCGGATCATTGTTTGCAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GACACACATCGCCCTTTTATACCCGCCGACACTCATTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTTGAACACCGTCCGGTTGTTGGCGGTAGCCGTCACCGTGTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GACTCTTCGGTTGTCAGATATGACCACGGCGGCATCATAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCAACGTCTCTGCCACGCAGTGCGGAGATACGTCGATGTTAACA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCGCCTGCACACTAAACCCGACACCACATCCCAACATGAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCCTTGTCAGCCGTCCATGGGTGGCTGGCCGTGGTGAGCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CATATTATCCCACTCAAGGTCAAGCAACGCCTTGTTCCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGATCAGATGAATCAACTTAAGATACTGGTGTATGCTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGAACAAAGTCACGATTGCAGCAGACCAGAAACCTGCTGCAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CACATGCTGCTGCTCAACCGCGCAGCGGAGTATGCTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CACACCGGCACAGCGGGTCGCACAGAACCGTCATGGGTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCTTCATTGCTACTGGCCACGACGTGGACGGCCTTGTCAGCCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GGTGTTACTGATCATGATTGCCGTTTGCATCGTTTTTTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCGGCAGGACGTACCGGCAGAACGTACCGACAATACAAGAAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTTCAACGGTGCTCGTTCTGCCCACCGTATTGCCCCTTTCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GGGAAGTACTCGGCGCGCGCCTCCATGATGGCTTCCAACGGGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTGCAGACGCACGTCGGTGGTTGGTACGGCTTACCGTTTCTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTACTGCACTATCCTATGCTCCTCGTGTAGACGAGAAGCACAGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GAACACCGGTGAAAAAACCCGCATGTGCGCGGTATACGTTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CAATAACTTGATGAGCGTCTGGCGACGCTCATCATTGCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGACTAATGCTGTCACGCTCGTTATCGATCACGCCGCTGTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGAAAAATTATTGTTATCGTCGCATCCATATTATTATCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTTAGTTGAGAGATTGGCTGCCCCGGAAGGGCGTAGTCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCAATAAAAAAACGGTATTTACTGCTTCCATACCGGTATCCT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTATTGCCAGCCGGTCAAATTCGGCAAGCACATCTTCAAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCGTACTTCACGGGGCGACCGACCACAAGGTCGGTTTTTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGGCTTCTTTGTAATCGACCGATACCGATCCATCACAACATGAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CACGACACAATGTCGACGCATCCCCCACCATTACCCCGCGTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGTACGTTATCGCGTGGTTGACGGTAGGACTGTTGGTGTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGTTTGAATAAGGGGCATCTGTAAAAAGTCCCCCAGCGCCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGAGGCATGGCAGATACTCGATAGACGGACGTTTATGAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGAAAACAATTGACTTGACAAGTAATTTGACAAAAAAGAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTGATCCGTTACCAGTGTCCAACCGTTGACACTGGTATTTGTCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CACCGCGATGGCGGCACTCATCGCGGTTACGATCGGTTTTTACT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTATTACGGAACAAACCATGCGTCGAAAAACCGATGTCCTGTAGAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCCGGTCTGGGTACGCTAAGACCACAAACATTGAGACATTAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTTATTTCTTATAGTCCTTTAGCGTCTCCCTCCAGTTTGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GATCATAAATTGTTGTAGCGACCGGAAATATCCGGTCTAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCGAACGTATGTTGTTGCAAGCACCTCGCTTGCCTTTGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGTATACGCTATCGTTGCGGGTGTACCGATCACGCCTTTCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGCAAACACCCGCATATTCGCGGTATACGTTGTCATATCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTATCATGTCTCGTAATAAAAGTGATACCTGCCACCTCAAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGCTGCGTAATTATGTTGAAGTACTCGGCGCAAGCGGTATCCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCCTGCGTTTTTTGTCACTATGTATACATCGGAGTCGGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGACTCATCAACACATAAAGATCGGGGTCTGGTGAGCGGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGCATCTTTGAGCGCCTTGACGGCGCCCAAAAGTGCCTTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTCCTATTCTTATCGGGTTCTACGACTTTGACCGTTTCTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CAAGAAGGCACTGGATACATTTTTACTCCAGCCGGTTAAGTTTGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTTCTCGGTGCTCCGGTAGAGTACTTGTTACCAATGCCTCGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTTTCTCATCGCTGGCCACAACGTGGACGGCTTTA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CAGATATGGCATTCGCCGTCTTGTATTGGTAACATACTTAGCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGGACGTTCTCCAAACGCGCATGAGACACAACCCATCAAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTTGCACAATCGACTGCTCCAATGTGGCGTCTGGGTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTAAGCTTTCGTTGACGTTGGAATATCGGTATAAGATAAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTGCCGTCTCCGGCTCCTGCGCCGCTGCCTGTGCTAAGGCAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	ATGCCGATATTGTTGCCTCCTATACACCTGGGTCGTTTGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA

>NC_011831|37|32|4194733-4201805|CRISPRCasFinder
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TGATACCGTACGATATACGGTGTACAAGATAATGTACAAGATC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CCAGATACCGGGGGCACTGTTGACCTCGAACACAAGTACC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CGCGGTAGCCGTCCATTGCAAAAATGCCGTAGTGCGTCTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TCTAGAACTCCACCAGAGCTTGCTCCGCCATGCGGATAAGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TGTACAGTATGTACACTGTACGTACACCAACAAATACTTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GAAAGAGCTACGGAACAAGCTATACTCCTTTGATATTGGTGA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CCAGACTGGAAGCTGCCATCCCAAAAGCGGCAACGTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CAATATCAAACGAGACACTGCCGACCTCCTCGTTAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CGGTTTGTACGCGACCACTCATCGAGTACTCGTTGGATAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	ATGGGAGGATCGATCGCAGTCTTACTAAAACGACCCCATCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TTAAAGAAGCCGTTCTGCAGGGTACCGACCTCTATAAAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GGCAGGAACGCCGTTTACGACCGTGTACACCGACACTTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CGGTATGATCCGGCAACGAATGTATCCGTTACTGGATCGTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CGGTATTATCCATACCGTTGACAAACAGGGCATATGCCTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TGGAGATGGCCGCACCATACAAGTGCGGCCATCTCCAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TCATATGTCCCTGCTTGCAACAAACTGCCTGACTCCGA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CTGAGAGCCAGCCCTGACGTCCTTTCTCCCTCAGTGAGGCAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CACCATTCCGTCTCGCCCCCGCAACCGACGGAGCATCCCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CGACGGTTATGTCGTGGATATTAAAACGGGAAAGCGAGTAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GTAGCGCAAACGGTGGTTGGATGGGCTGCACCCATACGTCGAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TTGTGCTGGAGCGCGAGTTGGAGCAAATGTACATTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TGATGATGTCGTCGAAGTAATCGAGTTATAAAAAAAGAAGGAGGA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TCGTTTGTTAGCGATACCGTTGTCGACCAAGCAGACCAACT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CGATGGTCAAGGCTCTATGTAAGGAAGTCCCTAGCGCCTTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GTACCGCGATGCGTGGTGGTGGTTATTGCTGCTTTTTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GCTATCATTCTTTGGAGATCACCGGCGAGCAACTCCTGCTTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	GTATTTGTAATTGTTTTCGCTAAGCCGGAAATTGATTTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	TTGACGAGGGCTGCACGGCTGGAAGCCGGAGTCTCTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	CGGTTGAGGAAGTACCTCCTCATACTGTGCTCGCGTTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	ACAGAATACCGACACACCGGTTCGACCGCTGGTGAAACCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	CGATCAGATAACAGTGTTCGGAGAGCCGGATTACCTTTGCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	TCGAAAACAGAGACCGCGTTGCTAAACGCGGTCAAGGCACTCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	AGGCGAGAGACATCGAGGTGAGGGGAACGAGTATCTGTATAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	TCATCATCAACCGCATTGCTGATTCGGATCATTGTTTGCAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	ACACACATCGCCCTTTTATACCCGCCGACACTCATTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	TTGAACACCGTCCGGTTGTTGGCGGTAGCCGTCACCGTGTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	ACTCTTCGGTTGTCAGATATGACCACGGCGGCATCATAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	CAACGTCTCTGCCACGCAGTGCGGAGATACGTCGATGTTAACA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	CGCCTGCACACTAAACCCGACACCACATCCCAACATGAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	CCTTGTCAGCCGTCCATGGGTGGCTGGCCGTGGTGAGCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	ATATTATCCCACTCAAGGTCAAGCAACGCCTTGTTCCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GATCAGATGAATCAACTTAAGATACTGGTGTATGCTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GAACAAAGTCACGATTGCAGCAGACCAGAAACCTGCTGCAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	ACATGCTGCTGCTCAACCGCGCAGCGGAGTATGCTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	ACACCGGCACAGCGGGTCGCACAGAACCGTCATGGGTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	CTTCATTGCTACTGGCCACGACGTGGACGGCCTTGTCAGCCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	GTGTTACTGATCATGATTGCCGTTTGCATCGTTTTTTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	CGGCAGGACGTACCGGCAGAACGTACCGACAATACAAGAAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	TTCAACGGTGCTCGTTCTGCCCACCGTATTGCCCCTTTCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	GGAAGTACTCGGCGCGCGCCTCCATGATGGCTTCCAACGGGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	TGCAGACGCACGTCGGTGGTTGGTACGGCTTACCGTTTCTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	TACTGCACTATCCTATGCTCCTCGTGTAGACGAGAAGCACAGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	AACACCGGTGAAAAAACCCGCATGTGCGCGGTATACGTTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	AATAACTTGATGAGCGTCTGGCGACGCTCATCATTGCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TGACTAATGCTGTCACGCTCGTTATCGATCACGCCGCTGTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GAAAAATTATTGTTATCGTCGCATCCATATTATTATCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	TTAGTTGAGAGATTGGCTGCCCCGGAAGGGCGTAGTCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CCAATAAAAAAACGGTATTTACTGCTTCCATACCGGTATCCT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TTATTGCCAGCCGGTCAAATTCGGCAAGCACATCTTCAAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CCGTACTTCACGGGGCGACCGACCACAAGGTCGGTTTTTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CGGCTTCTTTGTAATCGACCGATACCGATCCATCACAACATGAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	ACGACACAATGTCGACGCATCCCCCACCATTACCCCGCGTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GTACGTTATCGCGTGGTTGACGGTAGGACTGTTGGTGTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GTTTGAATAAGGGGCATCTGTAAAAAGTCCCCCAGCGCCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GAGGCATGGCAGATACTCGATAGACGGACGTTTATGAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TGAAAACAATTGACTTGACAAGTAATTTGACAAAAAAGAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CTGATCCGTTACCAGTGTCCAACCGTTGACACTGGTATTTGTCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	ACCGCGATGGCGGCACTCATCGCGGTTACGATCGGTTTTTACT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TTATTACGGAACAAACCATGCGTCGAAAAACCGATGTCCTGTAGAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CCCGGTCTGGGTACGCTAAGACCACAAACATTGAGACATTAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TTTATTTCTTATAGTCCTTTAGCGTCTCCCTCCAGTTTGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG	ATCATAAATTGTTGTAGCGACCGGAAATATCCGGTCTAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CCGAACGTATGTTGTTGCAAGCACCTCGCTTGCCTTTGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TGTATACGCTATCGTTGCGGGTGTACCGATCACGCCTTTCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GCAAACACCCGCATATTCGCGGTATACGTTGTCATATCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TATCATGTCTCGTAATAAAAGTGATACCTGCCACCTCAAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GCTGCGTAATTATGTTGAAGTACTCGGCGCAAGCGGTATCCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CCCTGCGTTTTTTGTCACTATGTATACATCGGAGTCGGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GACTCATCAACACATAAAGATCGGGGTCTGGTGAGCGGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GCATCTTTGAGCGCCTTGACGGCGCCCAAAAGTGCCTTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TTCCTATTCTTATCGGGTTCTACGACTTTGACCGTTTCTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	AAGAAGGCACTGGATACATTTTTACTCCAGCCGGTTAAGTTTGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CTTCTCGGTGCTCCGGTAGAGTACTTGTTACCAATGCCTCGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CTTTCTCATCGCTGGCCACAACGTGGACGGCTTTA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	AGATATGGCATTCGCCGTCTTGTATTGGTAACATACTTAGCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	GGACGTTCTCCAAACGCGCATGAGACACAACCCATCAAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CTTGCACAATCGACTGCTCCAATGTGGCGTCTGGGTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	TAAGCTTTCGTTGACGTTGGAATATCGGTATAAGATAAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CTGCCGTCTCCGGCTCCTGCGCCGCTGCCTGTGCTAAGGCAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAA	TGCCGATATTGTTGCCTCCTATACACCTGGGTCGTTTGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC	CAAACGGCAGGAACACCGTTTGCAATTGTTTGTACCGTTGC
CTTCAAAACACCAAAATCCCCGTGATTAATTTGTCGG

>NC_011831|37|6|4194733-4201804|CRT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGATACCGTACGATATACGGTGTACAAGATAATGTACAAGATC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCAGATACCGGGGGCACTGTTGACCTCGAACACAAGTACC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGCGGTAGCCGTCCATTGCAAAAATGCCGTAGTGCGTCTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTCTAGAACTCCACCAGAGCTTGCTCCGCCATGCGGATAAGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGTACAGTATGTACACTGTACGTACACCAACAAATACTTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGAAAGAGCTACGGAACAAGCTATACTCCTTTGATATTGGTGA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCAGACTGGAAGCTGCCATCCCAAAAGCGGCAACGTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCAATATCAAACGAGACACTGCCGACCTCCTCGTTAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGGTTTGTACGCGACCACTCATCGAGTACTCGTTGGATAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CATGGGAGGATCGATCGCAGTCTTACTAAAACGACCCCATCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTAAAGAAGCCGTTCTGCAGGGTACCGACCTCTATAAAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGGCAGGAACGCCGTTTACGACCGTGTACACCGACACTTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGGTATGATCCGGCAACGAATGTATCCGTTACTGGATCGTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGGTATTATCCATACCGTTGACAAACAGGGCATATGCCTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGGAGATGGCCGCACCATACAAGTGCGGCCATCTCCAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTCATATGTCCCTGCTTGCAACAAACTGCCTGACTCCGA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTGAGAGCCAGCCCTGACGTCCTTTCTCCCTCAGTGAGGCAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCACCATTCCGTCTCGCCCCCGCAACCGACGGAGCATCCCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGACGGTTATGTCGTGGATATTAAAACGGGAAAGCGAGTAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGTAGCGCAAACGGTGGTTGGATGGGCTGCACCCATACGTCGAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTGTGCTGGAGCGCGAGTTGGAGCAAATGTACATTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGATGATGTCGTCGAAGTAATCGAGTTATAAAAAAAGAAGGAGGA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTCGTTTGTTAGCGATACCGTTGTCGACCAAGCAGACCAACT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGATGGTCAAGGCTCTATGTAAGGAAGTCCCTAGCGCCTTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGTACCGCGATGCGTGGTGGTGGTTATTGCTGCTTTTTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGCTATCATTCTTTGGAGATCACCGGCGAGCAACTCCTGCTTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GGTATTTGTAATTGTTTTCGCTAAGCCGGAAATTGATTTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTTGACGAGGGCTGCACGGCTGGAAGCCGGAGTCTCTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCGGTTGAGGAAGTACCTCCTCATACTGTGCTCGCGTTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GACAGAATACCGACACACCGGTTCGACCGCTGGTGAAACCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCGATCAGATAACAGTGTTCGGAGAGCCGGATTACCTTTGCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTCGAAAACAGAGACCGCGTTGCTAAACGCGGTCAAGGCACTCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GAGGCGAGAGACATCGAGGTGAGGGGAACGAGTATCTGTATAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTCATCATCAACCGCATTGCTGATTCGGATCATTGTTTGCAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GACACACATCGCCCTTTTATACCCGCCGACACTCATTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTTGAACACCGTCCGGTTGTTGGCGGTAGCCGTCACCGTGTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GACTCTTCGGTTGTCAGATATGACCACGGCGGCATCATAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCAACGTCTCTGCCACGCAGTGCGGAGATACGTCGATGTTAACA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCGCCTGCACACTAAACCCGACACCACATCCCAACATGAG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCCTTGTCAGCCGTCCATGGGTGGCTGGCCGTGGTGAGCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CATATTATCCCACTCAAGGTCAAGCAACGCCTTGTTCCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGATCAGATGAATCAACTTAAGATACTGGTGTATGCTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGAACAAAGTCACGATTGCAGCAGACCAGAAACCTGCTGCAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CACATGCTGCTGCTCAACCGCGCAGCGGAGTATGCTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CACACCGGCACAGCGGGTCGCACAGAACCGTCATGGGTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCTTCATTGCTACTGGCCACGACGTGGACGGCCTTGTCAGCCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GGTGTTACTGATCATGATTGCCGTTTGCATCGTTTTTTC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GCGGCAGGACGTACCGGCAGAACGTACCGACAATACAAGAAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTTCAACGGTGCTCGTTCTGCCCACCGTATTGCCCCTTTCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GGGAAGTACTCGGCGCGCGCCTCCATGATGGCTTCCAACGGGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTGCAGACGCACGTCGGTGGTTGGTACGGCTTACCGTTTCTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTACTGCACTATCCTATGCTCCTCGTGTAGACGAGAAGCACAGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GAACACCGGTGAAAAAACCCGCATGTGCGCGGTATACGTTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CAATAACTTGATGAGCGTCTGGCGACGCTCATCATTGCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGACTAATGCTGTCACGCTCGTTATCGATCACGCCGCTGTGC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGAAAAATTATTGTTATCGTCGCATCCATATTATTATCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GTTAGTTGAGAGATTGGCTGCCCCGGAAGGGCGTAGTCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCAATAAAAAAACGGTATTTACTGCTTCCATACCGGTATCCT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTATTGCCAGCCGGTCAAATTCGGCAAGCACATCTTCAAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCGTACTTCACGGGGCGACCGACCACAAGGTCGGTTTTTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCGGCTTCTTTGTAATCGACCGATACCGATCCATCACAACATGAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CACGACACAATGTCGACGCATCCCCCACCATTACCCCGCGTG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGTACGTTATCGCGTGGTTGACGGTAGGACTGTTGGTGTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGTTTGAATAAGGGGCATCTGTAAAAAGTCCCCCAGCGCCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGAGGCATGGCAGATACTCGATAGACGGACGTTTATGAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGAAAACAATTGACTTGACAAGTAATTTGACAAAAAAGAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTGATCCGTTACCAGTGTCCAACCGTTGACACTGGTATTTGTCA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CACCGCGATGGCGGCACTCATCGCGGTTACGATCGGTTTTTACT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTATTACGGAACAAACCATGCGTCGAAAAACCGATGTCCTGTAGAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCCGGTCTGGGTACGCTAAGACCACAAACATTGAGACATTAT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTTATTTCTTATAGTCCTTTAGCGTCTCCCTCCAGTTTGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	GATCATAAATTGTTGTAGCGACCGGAAATATCCGGTCTAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCGAACGTATGTTGTTGCAAGCACCTCGCTTGCCTTTGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTGTATACGCTATCGTTGCGGGTGTACCGATCACGCCTTTCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGCAAACACCCGCATATTCGCGGTATACGTTGTCATATCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTATCATGTCTCGTAATAAAAGTGATACCTGCCACCTCAAA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGCTGCGTAATTATGTTGAAGTACTCGGCGCAAGCGGTATCCG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCCCTGCGTTTTTTGTCACTATGTATACATCGGAGTCGGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGACTCATCAACACATAAAGATCGGGGTCTGGTGAGCGGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGCATCTTTGAGCGCCTTGACGGCGCCCAAAAGTGCCTTTT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTTCCTATTCTTATCGGGTTCTACGACTTTGACCGTTTCTCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CAAGAAGGCACTGGATACATTTTTACTCCAGCCGGTTAAGTTTGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTTCTCGGTGCTCCGGTAGAGTACTTGTTACCAATGCCTCGG
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTTTCTCATCGCTGGCCACAACGTGGACGGCTTTA
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CAGATATGGCATTCGCCGTCTTGTATTGGTAACATACTTAGCC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CGGACGTTCTCCAAACGCGCATGAGACACAACCCATCAAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTTGCACAATCGACTGCTCCAATGTGGCGTCTGGGTAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CTAAGCTTTCGTTGACGTTGGAATATCGGTATAAGATAAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCTGCCGTCTCCGGCTCCTGCGCCGCTGCCTGTGCTAAGGCAC
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	ATGCCGATATTGTTGCCTCCTATACACCTGGGTCGTTTGT
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA	CCAAACGGCAGGAACACCGTTTGCAATTGTTTGTACCGTTGC
CTTCAAAACACCAAAATCCCCGTGATTAATTTGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015942139.1\|4192429_4193290_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl\|CDD\|273848
NC_011831.1\|WP_015942141.1\|4194302_4194584_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_011831.1\|WP_015942142.1\|4204616_4205267_+\|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl\|CDD\|273990
NC_011831.1\|WP_157044898.1\|4212745_4215049_+\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|273050
NC_011831.1\|WP_015942144.1\|4208908_4210642_-\|glyoxylate-carboligase	unknown	unknown	gnl\|CDD\|183066
NC_011831.1\|WP_015942149.1\|4218629_4220789_+\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|274698
NC_011831.1\|WP_015942135.1\|4186828_4187920_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl\|CDD\|187794
NC_011831.1\|WP_015942145.1\|4210694_4211570_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NC_011831.1\|WP_015942138.1\|4190890_4192327_+\|hypothetical-protein	csx1	mkCas0109_csx1_CAS-III	unknown
NC_011831.1\|WP_015942140.1\|4193267_4194287_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_011831.1\|WP_015942143.1\|4205325_4206855_-\|potassium/proton-antiporter	unknown	unknown	gnl\|CDD\|235410
NC_011831.1\|WP_015942136.1\|4187981_4189397_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NC_011831.1\|WP_015942148.1\|4218314_4218596_+\|DUF4212-domain-containing-protein	unknown	unknown	gnl\|CDD\|379403
NC_011831.1\|WP_015942137.1\|4189410_4190886_+\|hypothetical-protein	csx1	mkCas0109_csx1_CAS-III	gnl\|CDD\|187878
NC_011831.1\|WP_041470713.1\|4215032_4215578_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942131.1\|4181525_4183061_+\|tripartite-tricarboxylate-transporter-TctA	unknown	unknown	gnl\|CDD\|225870
NC_011831.1\|WP_157044932.1\|4185536_4185992_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NC_011831.1\|WP_015942134.1\|4186011_4186824_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NC_011831.1\|WP_015942147.1\|4216517_4217492_-\|deoxyhypusine-synthase	unknown	unknown	gnl\|CDD\|224811
NC_011831.1\|WP_015942146.1\|4211607_4212429_-\|TIM-barrel-protein	unknown	unknown	gnl\|CDD\|163190

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015942139.1\|4192429_4193290_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	2.53325e-19
NC_011831.1\|WP_015942141.1\|4194302_4194584_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.18909e-29
NC_011831.1\|WP_015942142.1\|4204616_4205267_+\|phosphate-signaling-complex-protein-PhoU	gnl\|CDD\|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	8.20149e-47
NC_011831.1\|WP_157044898.1\|4212745_4215049_+\|FAD-binding-protein	gnl\|CDD\|273050	TIGR00387, Glycolate_oxidase_subunit_glcD., glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity. [Energy metabolism, Other].	8.50706e-129
NC_011831.1\|WP_015942144.1\|4208908_4210642_-\|glyoxylate-carboligase	gnl\|CDD\|183066	PRK11269, PRK11269, glyoxylate carboligase; Provisional.	0
NC_011831.1\|WP_015942149.1\|4218629_4220789_+\|cation-acetate-symporter	gnl\|CDD\|274698	TIGR03648, Na_symport_lg, probable sodium:solute symporter, VC_2705 subfamily. This family belongs to a larger family of transporters of the sodium:solute symporter superfamily, TC 2.A.21. Members of this strictly bacterial protein subfamily are found almost invariably immediately downstream from a member of family TIGR03647. Occasionally, the two genes are fused.	0
NC_011831.1\|WP_015942145.1\|4210694_4211570_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	9.76458e-109
NC_011831.1\|WP_015942135.1\|4186828_4187920_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	5.64105e-31
NC_011831.1\|WP_015942140.1\|4193267_4194287_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	8.65673e-126
NC_011831.1\|WP_015942143.1\|4205325_4206855_-\|potassium/proton-antiporter	gnl\|CDD\|235410	PRK05326, PRK05326, potassium/proton antiporter.	0
NC_011831.1\|WP_015942136.1\|4187981_4189397_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.52466e-16
NC_011831.1\|WP_015942137.1\|4189410_4190886_+\|hypothetical-protein	gnl\|CDD\|187878	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as Cas02710 family.	0.00033282
NC_011831.1\|WP_015942148.1\|4218314_4218596_+\|DUF4212-domain-containing-protein	gnl\|CDD\|379403	pfam13937, DUF4212, Domain of unknown function (DUF4212). This family includes several putative integral membrane proteins.	3.26379e-33
NC_011831.1\|WP_015942131.1\|4181525_4183061_+\|tripartite-tricarboxylate-transporter-TctA	gnl\|CDD\|225870	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown].	0
NC_011831.1\|WP_157044932.1\|4185536_4185992_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	1.11251e-40
NC_011831.1\|WP_015942134.1\|4186011_4186824_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	9.68194e-100
NC_011831.1\|WP_015942147.1\|4216517_4217492_-\|deoxyhypusine-synthase	gnl\|CDD\|224811	COG1899, DYS1, Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones].	2.24248e-34
NC_011831.1\|WP_015942146.1\|4211607_4212429_-\|TIM-barrel-protein	gnl\|CDD\|163190	TIGR03234, OH-pyruv-isom, hydroxypyruvate isomerase. This enzyme interconverts tartronate semi-aldehyde (TSA, aka 2-hydroxy 3-oxopropionate) and hydroxypyruvate. The E. coli enzyme has been characterized and found to be specific for TSA, contain no cofactors, and have a rather high Km for hydroxypyruvate of 12.5 mM. The gene is ofter found in association with glyoxalate carboligase (which produces TSA), but has been shown to have no effect on growth on glyoxalate when knocked out. This is consistent with the fact that the gene for tartronate semialdehyde reductase (glxR) is also associated and may have primary responsibility for the catabolism of TSA.	5.98833e-92

>NC_011831.1|WP_015942141.1|4194302_4194584_+|CRISPR-associated-endonuclease-Cas2
MLYLISYDISVDRRRLKLAKLLEGYGQRVLESVFECDLEASAYRQLKQKLSRLINVAEGDRLRIYQLCGICRHNVEIIGEGPPLETSHDVYIF
>NC_011831.1|WP_015942140.1|4193267_4194287_+|CRISPR-associated-endonuclease-Cas1
MATLYVIEQGAEIGCDGERIEVRRGADIIGSVPLVKLDDIVIFGNVGISTPAMKRLLDRGIEVTFMTVDGRYQGRLIGQVTAHVALRHAQYACAADPARALALAQRFVEGKLRNQRALLQRFSRNRAEPPPEAQAAADDLEAYIKRVKRTTQLSSLLGVEGSATARYFAGLRSLIGPEWSFSGRQRRPPPDPVNLLLSLGYTLLAHKVLGAVQAAGFDPYLGFLHSLDYGRPSLALDIMEEFRPILIDSLVVRICNDGRIRPEHFRPGEGERPIIITDEGKRAFLTAFEERMRTEATHPEGADSGPGKVPYTRCIALQARRLARVVRQRTDDYEPFAVR
>NC_011831.1|WP_015942139.1|4192429_4193290_+|CRISPR-associated-endoribonuclease-Cas6
MPQAIVFTLRPAGAGRAPGNLSRAAHAAVLRLIQRADPQLAARIHDDDGRKPLTVSNVWGLGGGPSVLVDPERDYHLRVTLLSTELEQIAVEWTPERIGALELDGLPWRVIARADTVAEHPWANRADYQELAAPLLRRPDRLPNTWTLEFAAPVTFRQRGMTMPLPLPDLVFGSLLEQWNASAELALPDEVRRYATECLAISRFDLRSVAVPTSGGAIQIGALGRCTYRAMTGDRYWRACIDVLAAFAFYSGVGAGTARGFGQTRLVPAPHPEPNRSTTNGDTLRD
>NC_011831.1|WP_015942138.1|4190890_4192327_+|hypothetical-protein
MEALLVCNVGNRDLDCTALPKRTSERQWAQAALAQYDKLRTTFQLRIIAKALRYLAERDVTLERVVLIASDQPVSVGEQFYQSDTVYTAQIIARLLADGLTPYPPVDPTRIETWIIQDEHGTGCDPSDYDLTLRFLERRLLKLAAEYPKHTAFLEVTGGTPAMTTGLLIAGTEAFGGRTEVLSIHPTQSTPIALNTGRRLLATPLRATLLSNAATYAYAAAVRTLLEQEAIITDRLDPVAAKLLAPLLAYAHHRFNFDFASARRVLDKAEPAGPWQAEFTKLRAQVTEPDRRMRLAEVVHAAAARYDIGLYADFLTQLVRFEENLLRYLCLQHGVRFRSRQYTIDEDGPYLDREWLQRQSFTLSRDRDPSRDLLVDRSVLRELIGRLSDLTDPRQQQLLKDIDRLGELVKRRNELTHNLAGVQKVGLARAFAGPDAASTAADEIVPHLKRLYEQACKQSLPPSPYRHINHLLAQLLRQ
>NC_011831.1|WP_015942137.1|4189410_4190886_+|hypothetical-protein
MTILILCNIGNSDLIADGQRPSRPRPEGQQLWDEFTAHRFELPIITPCLEYIRNRYSNEPARLICFYTDQPERPGTTRPDRFGVSLRDKDTIWFAHIAARLVREQFTDWIVEARPERIEGSQGADLNPSIYDEVFEAYAGLVARHNKPEVSTCYVLTAGGIPACNFALQLQASIAFAERCRFVYPPEGGRVTELRIGEKLQESFQRVNAMEALKHRNFPAALLSVRSAKMSEAIIHLLEYAVYREAFDFHRAQHTIALAERWASGELRDLCATLHDDLLPLINNKDAAALLREVAYSAEIAARNGRYADMLGRIFRFQEGVLRFVVERYLGLPTDMSKAVREANLASYLAQIDGNPHLHQYLEQKTIDNQPLRYRDGPNRPVMQAMLEFVSNGGLRADGPPFAHKKERERLAGVKALLDRLDRLAELRNQSVIAHGFAGVSQDTINEVYEGGVDKIIDDLRRVLYLLDIQQLQSPFELIADNVSKVLQRGV
>NC_011831.1|WP_015942136.1|4187981_4189397_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MPAPNRVYRLQIETLSPLCILSGGRLYEEVDFYIDQNNKTTYVINSNAALELALQRWVGRQPSPEQQRARLMERKERLERRKQQNKNEIKRFDQSPPRDPVKAEREKQRLETEAEKIKQEFAKLRAEWEEFEATGGQGPAVPPELLANSGVSDLLTSKLLTTADFTADSPIVRYSYTGTPEVKTGQSEILACVKDVYDRLYVPGSSLKGALRTVLAWALAPTRAAQQPLSFTAANDNRKAAAQIEQAIFHGLKQQDGKRVSHALLLDVLRTVHIGDSRPLAQAPVLLQVRVFPKGSPITVEAIPAGVTLTAVLQIEQYPFQSPIARQIIDFGDWATYLQPAQIAAWGRQRAKVLIESEQRYFNGRADAANLSKFYADLRSRLDQLDGTNAFLAPIGWGAGWQSKTLADRLRDTPQREEQFVQAVKKYNMKLNHQRSERFRAHDVFPATRKVIVRNKQALLPLGWVCITIGD
>NC_011831.1|WP_015942135.1|4186828_4187920_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MPTFTVYRLVPPHNTATLAFHFGRQGIGLEETSETLASDSLFAALVVQAALSTAEVGDDGAPAWVRPFMHGEPPLRHSSLLPAIGELPLLPRPLLPLRLAETATVQAKQLKKLRYLSPALFAAACRGEALPATIIALQQGKVWLTEAEARCLPTPWRPAANESDEAWRKRLKVTPLWQIEATPHVALDRLSAASAYYEVGRVVFAAAVGLHVLVAFHDLAAQPVFERLLTLLGESGLGGKRTYGYGVFAWQRSTLTIDFPTPHRHAVLLSRYLPTPAELALVRDPRSTYQLVSSSGWFLAANGVTYRRQTVMMVSEGSVLAINDGQLPRGHIIDVRPNDTVAHPIYRSGMALAVPAPEVAFES
>NC_011831.1|WP_015942134.1|4186011_4186824_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MTRSVTLHGRIIFRANIELLTGLHIGGAAGGLEIGGLDKPVIRNPRTNQPYIPGSSLKGKLRSLLEKVYGAPQTFRVNEGVFVHVPTNEEEYTRYRPIAGVFGTLPSHQKLTISVPTRLAMRDVPLTEESEQELRQLRTDLPYTEVKWEAAIDRVTSAAAPRQIERVPAGAVFGPAEAVYSVYVGNGEQVSEVVALFGTLLEAFTYLEDDYLGGMGSRGNGQIRLCDVTIMARRLQAGSISEPQAVAQASSLRELNREQVIKHLQQIFAE
>NC_011831.1|WP_157044932.1|4185536_4185992_+|type-III-A-CRISPR-associated-protein-Csm2
MNRPSSGEQRESVSISAISSENLQKILGGNTPEAINLLIEEADRLGRALKEKNLTTSQIRNIFGEVRSIEQEVRVGTEKLPLSVQRRLLMLKPKMAYQVGRFGNNQALRALVETLSAAIDRVGDDVGRFHTFVDLFEAILAYHRFYGGRAN
>NC_011831.1|WP_015942131.1|4181525_4183061_+|tripartite-tricarboxylate-transporter-TctA
MDVISHLLTGFANALTPQYLVLAAIGVTIGTAVGVLPGIGPALTVALLLPVTYNFDPTGALIMFAGIYYGGMYGGSTTSILLNTPGESASVATTFEGFAMAKAGRAGAALATAAIGSFVAGTLSTILLTFTAPALARVALLFQPADYFALTVLAFVSVTALVGSSIIRGMISLFIGLFFGLIGIDVLSGQVRFTFGIVELLDGIDVVVVAVGLFAVGEALYVASQLRQTQAEVLGVRSSVGMTREEWRRSWPAWLRGALIGFPLGALPAGGAEIPTFLSYTVEKRLSKYKDEWGRGAIEGVAGPEAANNAAFSGVLVPLLTLGLPTSATAAILLAAFQIYNLQPGPLLFQKAPDLVWTLIASLYIGNVMLLILNLPLIRIWVKILTIPRPLLYSGILVFGTLGVYSMANSFVDVVIMYVIGVIGFWMRRFRIPVGPAILGLILLPLAEAQFRRALAISQGDVSVFVTRPLSFGLLLAAMVALVLPYVPALMNRLTGRQSADRLVFGQGDED
>NC_011831.1|WP_015942142.1|4204616_4205267_+|phosphate-signaling-complex-protein-PhoU
MRPREHFDQELDALRNQVLALGQTVSSALDRAITALERGDRELAQAVVDGDEAVNKAQTAIEQHAVHLIATQQPVARDLRRIIAAIAIGYELERIADYAKSTAKMVVGSPNANRGPLSPPAELVELGKIARINLDRTLLAFGDGSSEAIKGIIEQEDEIDHKYKRLKQALVAQLTPPETADLLFIAHNFERVSDRALNMAEKMIFINSGDQVELND
>NC_011831.1|WP_015942143.1|4205325_4206855_-|potassium/proton-antiporter
MATEPLLLITGLLLAISVAATRASNRFGIPALILFITIGMLAGSDGPGRIAFTDAGLAQLIGVVALIYILFSGGLDTDWSIIKPVLAEGLILANIGVLASTMIAAVGAHLILGFDWLLALLLGAIVSSTDAAAVFNVMRTRGIYLRHRLEPLIELESGSNDPIAVFLTVGLTQLLINPDSSLYTLIPAFILQMLLGAAGGYAFGRLMIWVVNRIRLQQEGLYIVLTMALTLLTYGFTAIIGGNGFLAVYLAGIMLGNANIVHKRSILRFHDGIAWLSQIVMFLVLGLLVVPSQLPAVAGQGLAMAFWLVFVARPLSVLIALGWTKRSLSQLLMVSWAGLRGAVPIVLATFPLLAGVPDAPLLFNLVFFIVLVSVLVQGISISWVARKLGVMADQPELIDSHLFVPDVSGASQILEAHIPPDSALVGKSIIEADLPRGVLIVQIQRTDGYLIPNGSTVFAPNDRLVLLVAPTALSAITELCASCSLNPIGPIKIGAQGQVEAQATEVKTN
>NC_011831.1|WP_015942144.1|4208908_4210642_-|glyoxylate-carboligase
MPRMNVMDAVINVLESEGVRYIFGVPGAAILPFYDALRKSKQIRHLIVRHEEGGTHAADGYARASGEVGICVGTSGPAGTNMITGLYTAMADSIPIICITGQARTDALHKEAFQAVDIVEIAKPVTKWAVQVKEAAQMPWVFRRAFQIAREGRPGPVLIDLPIDVQKQAIDYDASLDAPLPIYRPAPLQSALRRAIELLLTAERPLLMSGGGVIIANAAPELVALAEYLQIPVSPTLMGKGAIPEDHPLYAGIVGIQTQQRFANAIFLESDCILAIGARFADRHTGQLDIYRGNRTFIHIDIEPTQIGKVFHPDLGIVGDAKLALQGLLAEAHDCTPPRTPGAWFERVQYLKQTLTRRDDFDDVPIKAPRVFRELNEYFDRDTIFVTAIGLYQIWSGQFQKTYKPRHYMVCGQAGPLGWEVSACTGVKLARPDQQVVGVVGDYSFQFLMEEVAVAVQYRIPFVLVMINNTYMGLIRMAELPYQMNYEVKLGYETDTGQTFGIDHCKVMEAMGALAVRVTTPDQIRPALDWAVRESNHRRLPVLVEVMTEAEENAAMGTRIDQIREWHPLPEMTSTTI
>NC_011831.1|WP_015942145.1|4210694_4211570_-|NAD(P)-dependent-oxidoreductase
MTQRIGFIGLGVMGKPMARNLHRAGFTVTVWNRSPQPMNELAAEGLIPASSPAELARTSDVVITMLPNGPDVARVAQGADGLFAHMGRGSLFIDMSTIAPETVRQLAAAAADYGIAMLDAPVSGGDKGAATATLSIMVGGQPEDFERALPIFQTLGKTITYCGLIGAGQTVKACNQIAVAITMAAAAEALAFGKAAGIAPEIILRVLGGGLAQSRVLDIRGPTMARNEFRPGFRVRLHQKDMEIIHTTATALGLSLPFSDLVRTHFQRLIDSGNGDLDHSALALTVGYPGV
>NC_011831.1|WP_015942146.1|4211607_4212429_-|TIM-barrel-protein
MIRFALNVSLTMRDTPWRDRFDTAARLGFDAVEFWWPDGVDLTAIHHRLRDTGLQPVLVNLPAGNLAQGERGLLNHPTRQAEWRALVPRALEFACQIGCPRMNALVGKPVPTEPREVQLARVRENLAWLCEQAAAVGIEIVVESLNAWENDGYLLTTTAETLTFLASVGAPNLRYQYDCYHMQLMEGNITRTIREHIGQIGHIQVADAPDRHQPGTGELHFPFIFRTIAASNYTGFIGLEFIPAGTLADSLAWLPADRRRPIDPAELRWNDSL
>NC_011831.1|WP_157044898.1|4212745_4215049_+|FAD-binding-protein
MHEFLTALRDLLGTEHVITDPMNLAPYRHDWLPGDYPLPDVVVRPTDPAHLPAIVRLAQAVGLPVVTRGAGTGLTGGARPLYGGVVIDMTRLNAIEEIDLPNRWALVQAGMITYQLSAALAKHGWFYAPDPASWQMCTIGGNIANNSGGPRCLKYGVTTNHVLALEVTLADGRQGWIGDGTETFTWHGYDLIGLLVGSEGTLAVIGRAWLRLTRKPEANRVALALFPDVVSACAAVSAILAAGYVPTALEVMDATTMLAVNRAQQADLPAEAGAALIIEIDGVTEGLDETMAEIEVMCRRYGAFQIRTAVTIAEQERLWAARRSAFASFHTLAPSFLLVDTVVPRTRLPAMMAHTQRLSTQYGLPIANVFHAGDGNLHPLVLYDPSDPVQVAKAHAITADVLALSIAEGGAVSGEHGIGVEKRDFLARLYRQADLAVHATVYAVFNSEHRLNPGKVFPVGLDPLTLAAERTAGLVTPQSLAREHLPAALAEVVGAAYVLTGTDMAAYAVQGRLPALVVLPATTTELAGVMSLCYQAGVHVVPWGGGSQQAIGQLATEPDVVVVTRRLQRVVAYEPDDLTIRVEAGMTLAELKRALAAHQQQFPLEIADEAQATLGGLLATDTNGSRRLGYGALRDLVLGLTVVQVDGTVVQLGGQVVKNVSGYDVVKLFIGSHGTLGIISEVSLRTFPCPPATVSIVTGFADHNTAVRFLNELTTTQLQPVSAVYLDSRLLRTLRIQGEAGIALRFEGHPAACRRQLDEMVSIAICG
>NC_011831.1|WP_041470713.1|4215032_4215578_+|hypothetical-protein
MPYAVDAHTILIERGTEQARIWNLCTHGTALPQRSDTWPIQLAVKPTEFWVALQALTQTVADYGAELTVSRQPYHGLITGEITGEATAVEAILTALLKRWPHVRIPAGVLPDACAPQRWGYAADPLIPELTARLKQAFDPLNRLNRRWWPYSCEPVIGNSASVSSVTEHLIENHMIDGEAG
>NC_011831.1|WP_015942147.1|4216517_4217492_-|deoxyhypusine-synthase
MNGAVTQFIRHHFRHFNAAALVDAADAYNAHLANGGKMMITLAGAMSTAELGLSLAEMIRQDKVHAISCTGANLEEDIFNLIAHNFYERVPHYRDLSPHDEQALLERHMNRVTDTCIPEEEAMRRLEKALLAEWMNADRTGERYFPHEFIYRILRSGQLAQYYQIDPRDSWVYAAMERNLPIYVPGWEDSTTGNMYAAHCITGEIKNVHTVRTGIEYMIDLADWYIRTSAEASIGFFQIGGGIAGDFPICVVPMLHQDLGREGVPVWGYFCQISDSTTSYGSYSGAVPNEKITWGKLAVNTPKFIIESDATIVAPLIFAMVLGW
>NC_011831.1|WP_015942148.1|4218314_4218596_+|DUF4212-domain-containing-protein
MSDLSKLPVAERNRRYWQENLRLITILLVIWFVVSYVPVLFVEALNNIVIAGFPLGYYMGSQGSLIVFVVEIFYYAYAMNKLDAKYGLSDRDR
>NC_011831.1|WP_015942149.1|4218629_4220789_+|cation-acetate-symporter
MATSAQSQSVFRNRMARYYGYFTIGFIGISLLMLLLEVFAGLPTQIIGWVFLLLTMALYATIGILSRTKLLDEYYVAGRNVPAVFNGMATGADWMSAASFISMAGTLWLLGYDGLAYIMGWTGGYVLLALLFAPYLRKFGQYTIPDFVGARFGGNTARVVAAICAIIVSLTYVTAQVVGVGLIMQRFVGVDYTIGVILGLSGVLVCSFLGGMKAVTWTQVAQYIILIIAYLIPVTALSIQLTGFPIPQLSYGQALQRIQVLEQEQGLAKTAESPVVPGKFVTSGYIPPFNEGLSNAAAVDAVKQLNTQFGLNVTPPALQTIPDAKKPELGDWRGTPWNFLALMACLMLGTAGLPHILIRFYTVPSVRESRMSVGWSLFFIFLLYFTAPAYAAFSRWQILENVVGKPISELPNWTKTWASNGLIVIRDLKAIDGVEIGKEPGWVKNLINAKSLVVEDANGNGKIDLGPWEDIGEGKGRAGEISGTVVTKARTDGILQLNELGRTTADGIDGDLVVLSTPDIAGLPFTIGALIAAGGLAAALSTADGLLVVIASAIAHDIYFRTINPKASLNTRIVLGKSMIVVAAVVAALLAMPRLALIAQMVAWAFSMAAATFFPVVLLGIFWKRANGPGAIAGMIGGLAVTLFYMFNNYTNPAFNVLGISHLGSGIFGLPVAIILIVVVSLLTKEPSKEIQDLVDNLRNPITDDEGMSKMLDKVATAK

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Crispr_ID: NC_011831_38

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_38

4254645-4254733

Orphan

Consensus_repeat	Method
CCCCGATAGGGTAGGTGATTGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011831_38

>merge|NC_011831|38|4254645-4254733|CRISPRCasFinder
CCCCGATAGGGTAGGTGATTGCACGGTGCAGTGGTCGACGTGCCAGTTGCGTTGGCTGTCTTGTCTCTCCGATAGGGTAGGTGATTGCA

>NC_011831|38|33|4254645-4254733|CRISPRCasFinder
CCCCGATAGGGTAGGTGATTGCA	CGGTGCAGTGGTCGACGTGCCAGTTGCGTTGGCTGTCTTGTCT
CTCCGATAGGGTAGGTGATTGCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015942185.1\|4265291_4265816_-\|DUF1003-domain-containing-protein	unknown	unknown	gnl\|CDD\|377629
NC_011831.1\|WP_015942167.1\|4243559_4245194_-\|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	unknown	unknown	gnl\|CDD\|273534
NC_011831.1\|WP_049762868.1\|4254385_4254640_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350158
NC_011831.1\|WP_015942180.1\|4258813_4261225_-\|glucan-1,4-alpha-glucosidase	unknown	unknown	gnl\|CDD\|130598
NC_011831.1\|WP_015942173.1\|4251269_4252661_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_085953526.1\|4252889_4253867_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NC_011831.1\|WP_015942179.1\|4257762_4258809_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NC_011831.1\|WP_015942177.1\|4256787_4257219_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|225308
NC_011831.1\|WP_015942176.1\|4254937_4256764_-\|SLC13-family-permease	unknown	unknown	gnl\|CDD\|238535
NC_011831.1\|WP_157044899.1\|4263788_4263959_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942171.1\|4248961_4249453_-\|DNA-starvation/stationary-phase-protection-protein-Dps	unknown	unknown	gnl\|CDD\|236521
NC_011831.1\|WP_015942166.1\|4242273_4243563_-\|coenzyme-F420-hydrogenase	unknown	unknown	gnl\|CDD\|223966
NC_011831.1\|WP_083768964.1\|4250207_4251023_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349398
NC_011831.1\|WP_041471155.1\|4247643_4248927_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270304
NC_011831.1\|WP_015942178.1\|4257234_4257753_-\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942182.1\|4262352_4263645_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NC_011831.1\|WP_015942169.1\|4246994_4247534_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|372305
NC_011831.1\|WP_015942168.1\|4245247_4246525_-\|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	unknown	unknown	gnl\|CDD\|273535
NC_011831.1\|WP_015942184.1\|4264529_4265120_+\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|377032
NC_011831.1\|WP_015942181.1\|4261221_4262334_-\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|176192

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015942167.1\|4243559_4245194_-\|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	gnl\|CDD\|273534	TIGR01278, DPOR_BchB, light-independent protochlorophyllide reductase, B subunit. Alternate name: dark protochlorophyllide reductase This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	0
NC_011831.1\|WP_049762868.1\|4254385_4254640_+\|hypothetical-protein	gnl\|CDD\|350158	cd09007, NP-I_spr0068, uncharacterized subfamily of the nucleoside phosphorylase-I family. This subfamily is composed of uncharacterized members including Streptococcus pneumoniae hypothetical protein spr0068. The nucleoside phosphorylase-I (NP-I) family members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases such as purine nucleoside phosphorylase (PNP, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases such as AMP nucleosidase (AMN, EC 3.2.2.4) and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). Members of the NP-I family display different physiologically relevant quaternary structures: hexameric (trimer-of-dimers arrangement of Shewanella oneidensis MR-1 UP); homotrimeric (human PNP and Escherichia coli PNPII or XapA); hexameric (with some evidence for co-existence of a trimeric form) such as E. coli PNPI (DeoD); or homodimeric such as human and Trypanosoma brucei UP. The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	1.21918e-26
NC_011831.1\|WP_015942180.1\|4258813_4261225_-\|glucan-1,4-alpha-glucosidase	gnl\|CDD\|130598	TIGR01535, glucan_glucosid, glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NC_011831.1\|WP_085953526.1\|4252889_4253867_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	3.19828e-96
NC_011831.1\|WP_015942179.1\|4257762_4258809_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	8.34249e-35
NC_011831.1\|WP_015942177.1\|4256787_4257219_-\|EamA-family-transporter	gnl\|CDD\|225308	COG2510, COG2510, Predicted membrane protein [Function unknown].	7.43406e-45
NC_011831.1\|WP_015942176.1\|4254937_4256764_-\|SLC13-family-permease	gnl\|CDD\|238535	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.	3.52542e-37
NC_011831.1\|WP_015942184.1\|4264529_4265120_+\|PepSY-domain-containing-protein	gnl\|CDD\|377032	pfam03413, PepSY, Peptidase propeptide and YPEB domain. This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase & Bacillus subtilis YPEB.	6.71615e-07
NC_011831.1\|WP_015942171.1\|4248961_4249453_-\|DNA-starvation/stationary-phase-protection-protein-Dps	gnl\|CDD\|236521	PRK09448, PRK09448, DNA starvation/stationary phase protection protein Dps; Provisional.	2.16948e-84
NC_011831.1\|WP_015942166.1\|4242273_4243563_-\|coenzyme-F420-hydrogenase	gnl\|CDD\|223966	COG1035, FrhB, Coenzyme F420-reducing hydrogenase, beta subunit [Energy production and conversion].	1.49648e-56
NC_011831.1\|WP_083768964.1\|4250207_4251023_+\|hypothetical-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	7.66284e-17
NC_011831.1\|WP_041471155.1\|4247643_4248927_-\|extracellular-solute-binding-protein	gnl\|CDD\|270304	cd13586, PBP2_Maltose_binding_like, The periplasmic-binding component of ABC transport systems specific for maltose and related polysaccharides; possess type 2 periplasmic binding fold. This subfamily represents the periplasmic binding component of ABC transport systems involved in uptake of polysaccharides including maltose, maltodextrin, and cyclodextrin. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.48198e-29
NC_011831.1\|WP_015942182.1\|4262352_4263645_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.13378e-31
NC_011831.1\|WP_015942169.1\|4246994_4247534_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|372305	pfam12773, DZR, Double zinc ribbon. This family consists of a pair of zinc ribbon domains.	8.16073e-13
NC_011831.1\|WP_015942168.1\|4245247_4246525_-\|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	gnl\|CDD\|273535	TIGR01279, DPOR_bchN, light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	0
NC_011831.1\|WP_015942185.1\|4265291_4265816_-\|DUF1003-domain-containing-protein	gnl\|CDD\|377629	pfam06210, DUF1003, Protein of unknown function (DUF1003). This family consists of several hypothetical bacterial proteins of unknown function.	1.01784e-25
NC_011831.1\|WP_015942181.1\|4261221_4262334_-\|glucose-1-dehydrogenase	gnl\|CDD\|176192	cd08230, glucose_DH, Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	1.694e-169

>NC_011831.1|WP_049762868.1|4254385_4254640_+|hypothetical-protein
METDAPYRETVQKVERRRAEGCVAIEMGAAGMMVVAQFREVAFGQILYGGDDISGLTRDSRAVQSRAAIRERIFWLSADAFLRM
>NC_011831.1|WP_085953526.1|4252889_4253867_+|MoxR-family-ATPase
MVSTVSETAIAEIHRVATAIRARIGEIIVGKETIIDLLLAALLCEGHVLLEDVPGTGKTTLARALAGALGCTFQRIQFTPDLLPSDITGLSFFNQKIGEFQFRPGPIFAQIVLTDEINRATPRTQSALLEAMQERTVSIDGETRSLPRPFLVIATQNPIELEGTFPLPEAQLDRFLIKVAMGYPSAAEEEEIVRRSLVPANSTVVSPVVSAETVRTLQAAVRTVAISPPVRQYLVAIARATRGHPDIELGASPRGSLALAHLAQAWAAMAGRNFVLPDDVKVMVIPALNHRLILTAEARLRGQTTTVILQRLLDQIPVPVEGEVA
>NC_011831.1|WP_015942173.1|4251269_4252661_+|hypothetical-protein
MRRFLLIISLLFVVTLASVQAQANPVTLWVPLVQAPPPTVAGYLGSAQDDTLVAVGFDPAGALVLAGNVPALAGAPETIVPGGGAGALIQIAADGRTISRVVRVAAKLNHAALAADGSAVACGPDGVIVLEPDLATVRWRATPGAIARCAIGADGRVAALRAVDRTVPVYPPAGGSPLAIAVAGTAVADIALDTANGLLVATGYTQAASDLKVAFLRAYRLTDGSVAWQRYGFSAAAVKGANLAADSEGRRLALGADGLLYFAGFTDGGNSIFGRDPANLSRVLSTSELITFDQYNNPFNLSGAKSLAWYGRFDPATGALLRGQWLLTRLSDGKGNSITIRALAAAADGTLLIVGDTACCLQGRSAMQLFGYTLGNYELGEPFALVVSPDFGQRRLWTALAAPGATAGSSPAIAVALTNDRLVLVVNVTPNTANTRALVTVGNPVFTASNGGREGYYLLMARP
>NC_011831.1|WP_083768964.1|4250207_4251023_+|hypothetical-protein
MTQWFERARFELHPYLGPEVVLLGLLGREAFNVSTPSVVLPDDWLGRLNAYRVLAGLSPVQEDAVLNERCFQHARYMAENSDLTHQQNPSLPYASPDGQICAQHGNVWLGWGTRWQPVHAIDGWMESVGHRLWMLYPTLRLVGFGFYTTASGLQSAAALDVLSNFNEGVDYPGWPVRYPGANQQGVPATIYPITLHWRYFGNAPVVTATELRVVSGATLPHTVSTDLPAGHKGIMIIPAQPLPALATIEVTVAGNYDGRTFTYTWRFQTGW
>NC_011831.1|WP_015942171.1|4248961_4249453_-|DNA-starvation/stationary-phase-protection-protein-Dps
MTQTTEFVTRIDLPLERRRTLTAMLNQQLADTFDLMSQTKQAHWNVKGSQFIALHELFDELASHLSGFVDTLAERVTALGGMAMGTVRMAAATSRLPEYPTDITDGMAHVAALADRFAAYAHTTRQAITTAADLGDQATADLLTEIARTIDKDLWFLEAHLQG
>NC_011831.1|WP_041471155.1|4247643_4248927_-|extracellular-solute-binding-protein
MIGVAALICIACAAPAPAPTPTVTVTAAPTTTTAPTATAMPAATPTAPPTATPVTRNLTIWVAELPDAQAVVASELHRAAQIGDLHVTIVPRDPDGLLISLATDHLLGLPPPDLIWADQEALVGLLADNALAPIGIELPADLLPGLRTLASSNNTLWGAPITAQDMLLLLYQLDCSPPATAADLVAAAQAARTSERAGFVQGWGAARWLAPWFYVAGGAFTTPDGAEPTLDTPAMTTTLTLLRDLYRAAPHNGDSYTRGQRLLTQGFAAYAIDGDWAWATYRAISDTFQIGIAPLPSFNGNPTRPLIGGSLLMRHRDGQATPEDVTTLITTLYQPEVQLRLSAALGRLPARRELLTDASIQTDPVRAIAAMQVTDAPGLPPTPAVRCAIFGVESYLYSATTGDLPINEAPLRMQREALACLRQFVQP
>NC_011831.1|WP_015942169.1|4246994_4247534_-|zinc-ribbon-domain-containing-protein
MHCPHCNTELPDDARFCIECGTAVRIATGETVPLSSRGNTTITCPHCRSINPRYARFCVHCGQSLLTSGPVVHTPPSPQPHPTYQVSHWNAVLFLIGATLLIPVIFSFPPMIWLTILIIIGIAQIIFYFSIGKIRTAILYAIGLLGIGLLLRIRQLTFPAFILLVGLALLIGIRLWKGK
>NC_011831.1|WP_015942168.1|4245247_4246525_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N
MHKASTIREDGLYHSFCGLVSVGWLYQKIKDSFFLILGTHTCAHLLQNTLGVMIFARPRFAVSLLEESDLSSSQPDISAQIEEIKREHHPSVIFLLSSCTPEVMKVEFEGLAASVSTPEVPVLFVPASGLDYTFSQSEDSVLQALIPFCPPAPPEDKRVVFLGSVNDAIADDFSLEAARLGIPVAGFLPASHFHELPPIGPGTIVAPLQPYLHKTATQLRNERGCTILSSLFPLGPDGTRRFWEDLAAHFDIKVDLSDREAAAWERIKRHTDLLRGKKIFFASDTLMELPLARFLKACGAEVVECSTPYINRRFHAAELAALEGVRLVEQANFHRQLQTIAETKPDLIISNIITTNPLVGQGTVAKWGTEYCFLPIHGWAGVNALVTSFTRALERHAKLDPLGSDPIWLTGIMPGAPGGVISLQS
>NC_011831.1|WP_015942167.1|4243559_4245194_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B
MRLAYWMYEGTAHHGVGRIANSMRNVHAVFHAPQGDDYVNAIFAMLERSPNFPAMTTSVVSGTDLARGTIRLPDTLKQVEERVHPDLIIVVASCSTILLQENLEIAAQHAGLQCEVMVYDANPYRMQEIVAAESLFTDLVKRFAKPQPRTERPTVNILGPASLGFHARHDLISLRRMLKTLGVEINVVAPWGASIADLRRLPAAWLTIAPYRELGLRAATYLEEQFGVPALLDAPIGVQPTLRWIERLRELLAQAGADIPMPPLTAFSLDGLSAPSAVPWLARTADMDSFSGKPAFVFGDATHVVGVTRFLHDELGMPIAGAGTYVKHQADWVREQLAGYVDEVLVTDEFQTVAARIAALRPELVCGTQMERHTSRRYDLNCMVISPPTHIENHLLAYRPFLGFDGADVIADEVYTTCTLGMEKHLIDLFGDAGLELPEKAKNGSAQAVEPAPAAVTVESPKPEQEPAVATVAVSGPTPAVAAPPAPAAPVDPVWAADAEAMLKKVPFFVRGRVRGNVERYARQHGHAVITAQVLLAAKEELGA
>NC_011831.1|WP_015942166.1|4242273_4243563_-|coenzyme-F420-hydrogenase
MNSALPSKAPHRLQPPRPLSEIALLSREERLAGRPKLCSDCGICTGDLRPLMAQSCVFVNNRAEEIERRLHGRNRHDGDELLFGIYRELHVFRMKPPVPGAQWSGAVTSLGALLLERGLVEGVITTGAVPGTRYAPLPILARTPDEVRATRGNKPCLAPTLDVLTQVRQAGLRRIAYIGTGCQVHALRAIEDQLGLERLYVIGIPCTDNTTYPDLQRFLQVVSRSPDTVVHHEFMQDFRIWLKHEDGSVEKVNFVDLDVARLGGEIGVFPPACLSCFDYQNGLSDLTIGYMGAPLPPDERWQWTLVRTERGVELFNLLRPYIEERAPISGGDRTRGMPAYIQMLRKPRRRPPWPIRQLVAFIQRRSGPKGLEFARSVIEMKLLRNLQFVRERHGRLERRIVPGYVYRALARYADVYRREFGCELQPPAR
>NC_011831.1|WP_015942176.1|4254937_4256764_-|SLC13-family-permease
MTSLFPLSLAEILLVIITLTGLGCIISGRLRPDLAALLVLIALGVTRVISSQEAFSGFSNSAVITIIGLSVITAALEQTGAVRWVAHHLAGLSGKSETRMIALFMIAGALLSLVMNNIAAGAVLLPAAVQVARQAQIPASKILMPLSFGTLLGGMATLFTTANIILSGNLIAQGQRGLTMADFLVSGGPMVITGLLYMLFIGRKLLPTRETTGLTAVGAGAVDLRSLYQLDQRLWEVRLPPDAQIVGNTLAEANISALTGTTVLAIWRGHTAIFHPTPTEQLRGEDILLVLGREDRVTQLEQFGCIIGRNSTPGHRLNLPIELAEVIVGPRASFTGQTLQQLRFRTKFGLTVVSLWREGRSYRTNVGTIPLAAGDALLITGPLDRIQQLAEEPGFIVLHTQPAEQLVGRQAVIAGVITLVVLLAATTGWIATGEAMLAGAAALIISGCITMDDAYRAIEWRVITMIAGLLPIGIALTETGLGAKIGTLLTSKLVVYGPMALLTGLFLTTVLMTQLVGGQVTPLIIGPIAISAALNAHVNPQAIAVAVAIGCSTAFLTPIAHPVNSLMMGPGNYRFGDFLRVGLGLTVMCLLTLLIVMPTVWNLSSITP
>NC_011831.1|WP_015942177.1|4256787_4257219_-|EamA-family-transporter
MDSYGWLIWALLSAVFAALTTILAKIGIQDVDSDLATLIRTIVIVAVLTGFVWFTGKWTNPFTLGSKTLGFLVLSALATGASWVCYFRALQQGDAAKVAPIDKLSVVLVAIFAVIFLAERPSLREWLGIGLVGAGVVIIALAK
>NC_011831.1|WP_015942178.1|4257234_4257753_-|hypothetical-protein
MLLSLHATVYCHTTPCGVVSGVFFDRPSLRLTSILVQEQGLLAAERLVPVLAIDSVTDNTITLTITDDEFTECDPFSEPIELYHLTPELSTITDLPLLRHHARVLASDGFIGRLSALHLDADWQIVAILLHRGHWWGNCDISIPIHLVATINEFAVTLTVRRDEIASLVTKQ
>NC_011831.1|WP_015942179.1|4257762_4258809_-|AI-2E-family-transporter
MSRFVIRHIAGWIGLLSAVVAAWLIIHYATLLLEVVGILFGATLLSLAIAPIAERLAHWHVPRGITVLAVYILGGIVLIALIELLIPVIRIEAQALRSQGPHLFQQVTAWVSGLPVIGSTVLSMHQSTIPNLGQQLGNVIDSVVRILFGTGGLLLDLLIVTVLSFLFITDPGLPKRLIASWIPAAVQPRLQDFIERLRRRLTRWIWAQILIALYFVVVYSIGLSVLGVPFALTIGIVGGLLEIVPYVGGAFALILAVISSLSVSPWLVIWVIVFHVVVVELESHVIAPALYGRIIGVHPALMLLALFVGAKTGGVLGVFFAVPVTVVILACGQELRHSFAISNRTTNS
>NC_011831.1|WP_015942180.1|4258813_4261225_-|glucan-1,4-alpha-glucosidase
MTQTTVRYAPGWPGIPARWTSSAKTGIGTALNPASRVWFTISHGILNEIYYPRIDQACTRDCGLIVTDGHSFFSEEKRHTTSIVTMLAVGVPAYRLVNRCQQHRYQIEKMVITHPMYNAMLQQITFTPLQGSLDQYSVFVLLAPHIGNRGAENTAWIGDYKGLPMLFAERYGLALAVACSASWTARSVGFVGSSDGWQDLVRNYRLTTLYERAENGNVALTGGIDVMACHGQFTIAIGFGQTWAEAAWHARAALSDDFDSVCATYIQAWQAWQQTLTALTTIHQQVSAMVLRVHESKQFPGGSIASLSIPWGMAKGDDDLGGYHLVWPRDLVEIGGGLLAIGANDDARRILNYLALTQEPDGHWPQNMWLDGIPYWNGIQMDETAFPILLLDLAVTTGAIDPATVYRYWSMVRRAASFLIRNGPVTAQDRWEENAGYSPFTLAVEIAALLVTAELAEQYGEPTIADYLRTTADSWNADIDRWCYVTGTDLAHRVGVTGYYVRIAPPDVAEAASPMQGYVPIKNRPPDQANAPLSYIVSPDALALVRFGLRDPHDPRIVNTVQVIDALLKIDTPCGPVWRRYTDDGYGEHQDGAPFDGTGIGRGWPLLTGERAHYELAAGRVEVAKRLLTTLEAFANEGGFIPEQVWDSADIPERELFLGRPAGSAMPLAWAHAEHLKLCRSLADQRLFDMPRVTAQRYLDRQVQSKIAIWRPNQKRRRIVAGMTLRIDLNAAAMIHWSADHWQTIHDTTTAASGLGTFFADLPTETLAPATEIVFTLYWIEQQQWEGRDYTVQIEASGVRGEY
>NC_011831.1|WP_015942181.1|4261221_4262334_-|glucose-1-dehydrogenase
MDALAVQPGSAGIRLVQRPQPEITRPDEVLVRIIRVGICGTDREIVSGGRAKASDHATDLVIGHEMFGRVEAVGSAVQRVHVGDFAVFTVRRGCTQCLPCLMNRPDMCRTGNYRERGIWGLDGYQTELVLDTEAYVVKVPAELEAVGVLLEPLSVAEKAIDEAIRIQQARLPDAPATPNWLFGRRCLVAGIGPIGLLAALALRLRGAEVYGLDIVDANTTRPRWLATIGGHYLDGRTVPPGQIAQIAGMMDLILEATGVPAIEFNLLDALAPDGMYVLTGIPGGDRPLQVAGAELMRRLVLNNQVMVGSVNAARDHFQLAVDDLLQAHYRWGSILNDLISHRYPYTAFPDAFQQHDPHDIKIVLEWEQAQ
>NC_011831.1|WP_015942182.1|4262352_4263645_-|MFS-transporter
MSEQSPFESTLHQSSTSPSWRAWIEPWYAVYALLGAVSAGLLPILIPLFVHQQGTAAEVGLVMAALNASGLLAPLWSWLADRYRWHRQIIAGGMALTAIGTTIFMFVTNAVLWAVIALLLNLGAIAAATIANLLIIERFPRTEWDERLGWLQTAYGGGQVFGLLITAFLGQTDLRMGFGITALCCFIGMGIAWRFVRTPSAARPTIPLLRHHPKHTDGMFSSPYQLLHHLNPTLICNRNGILTTPLSVWLGVWLLAASGAGSFFALYPIVMQQVFSIAPSIAAGGFAVAAALGLLLYAPAGDLMHRIGPLAVVRYALIVRAGACALLWLIGNVSVGFVPVITIFIIIVLSWSFISVSATDLTALLSPVEGGESIGLFNAISALANIIGASLGGWIAVQFGYPAVIAWAALGVACGAAGTYILRPPPQAAS
>NC_011831.1|WP_157044899.1|4263788_4263959_+|hypothetical-protein
MASTLVVVVIEVLLLEGNITRLSVSERLPHPQCNFTGCERATYSVLIQSCSTVAGS
>NC_011831.1|WP_015942184.1|4264529_4265120_+|PepSY-domain-containing-protein
MKRWIRIFAPMVALALVVVAAIAALGNTNVQARRADPVSAVVVAQAQPQAPTVTVEPDEGSETPDAQEGPETPDAQEGPETPDAQEGPETPDAQEGPETPDADESAEAAALASKVAISEQQAVATALAANPGATMVKVSLDDENGVIVYSVELDNGTDVKVDAITGQITSVDQAGAEEEGNDVEHVDETPTVSVQP
>NC_011831.1|WP_015942185.1|4265291_4265816_-|DUF1003-domain-containing-protein
MHFHLPQPPHALSELRRQRQPIRDVNREHSEQIGRLDRLALFITERVGTMGFFLAIFTWTVVWLGWNLLAPKPLQFDPPMAFVFWLFISNMIQILLMPLLMVGQNLQGRHAELRAQSDYEVNLRAEREIDAILQHLEYQNALLHALLIKAGIPNDQLPPIPVFTVQTTNKTEQS

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Crispr_ID: NC_011831_39

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_39

4433996-4434412

Unclear

Consensus_repeat	Method
GTTGCAGGCGGANGAGCCGGC	CRT

9 spacers

cas3

The CRISPR arrays of NC_011831_39

>merge|NC_011831|39|4433996-4434412|CRT
GTTGCAGGCGGAGGAGCCGGCCGCACCGACCAGCGACGTACCGGCGTGGTTGCGAACGGAGGAGCCGACGGCGCCGACCAGCGACGTGCCGGTGTGGTTGCAGGCGGAGGAGCCGGCTGACGCTGCCCCGGCCTGGTTGCAGGCGGAAGAGCCGGCCGCACCGACCAGCGACGTACCGGCGTGGTTGCGGGCGGAGGAGCCGGCTGACGCTGCCCCGGCCTGGTTGCAGGCGGAAGAGCCGGCCGCACCGACCAGCGACGTACCGGTGTGGTTGCAGGCGGAAGAGCCGGCTGACGCTGCCCCGGCCTGGTTGCAGGCGGAAGAGCCGGCCGCACCGACCAGCGACGTACCGGCGTGGTTGCAGGCGGAGGAGCCGGCTGACGCTGCCCCGGCCTGGTTGCGGGCGGAGGAGCCGGC

>NC_011831|39|7|4433996-4434412|CRT
GTTGCAGGCGGAGGAGCCGGC	CGCACCGACCAGCGACGTACCGGCGTG
GTTGCGAACGGAGGAGCCGAC	GGCGCCGACCAGCGACGTGCCGGTGTG
GTTGCAGGCGGAGGAGCCGGC	TGACGCTGCCCCGGCCTG
GTTGCAGGCGGAAGAGCCGGC	CGCACCGACCAGCGACGTACCGGCGTG
GTTGCGGGCGGAGGAGCCGGC	TGACGCTGCCCCGGCCTG
GTTGCAGGCGGAAGAGCCGGC	CGCACCGACCAGCGACGTACCGGTGTG
GTTGCAGGCGGAAGAGCCGGC	TGACGCTGCCCCGGCCTG
GTTGCAGGCGGAAGAGCCGGC	CGCACCGACCAGCGACGTACCGGCGTG
GTTGCAGGCGGAGGAGCCGGC	TGACGCTGCCCCGGCCTG
GTTGCGGGCGGAGGAGCCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015942335.1\|4444421_4445321_-\|UV-damage-repair-endonuclease	unknown	unknown	gnl\|CDD\|235029
NC_011831.1\|WP_041471171.1\|4431035_4431221_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942330.1\|4437787_4438435_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942336.1\|4445438_4446683_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NC_011831.1\|WP_041470744.1\|4448189_4448468_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942333.1\|4441621_4443439_-\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	unknown	unknown	gnl\|CDD\|274738
NC_011831.1\|WP_015942337.1\|4446757_4447510_-\|ribonuclease-PH	unknown	unknown	gnl\|CDD\|178914
NC_011831.1\|WP_015942322.1\|4425552_4428141_+\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NC_011831.1\|WP_015942320.1\|4424414_4424600_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NC_011831.1\|WP_015942332.1\|4440496_4441531_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	unknown	unknown	gnl\|CDD\|235604
NC_011831.1\|WP_015942321.1\|4424701_4425556_+\|DegV-family-protein	unknown	unknown	gnl\|CDD\|273257
NC_011831.1\|WP_015942328.1\|4432237_4432906_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942324.1\|4429417_4430488_+\|ATP-dependent-6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NC_011831.1\|WP_015942325.1\|4430530_4431019_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176871
NC_011831.1\|WP_015942327.1\|4431438_4432233_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942334.1\|4443597_4444341_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|238194
NC_011831.1\|WP_015942338.1\|4447578_4448178_-\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|223200
NC_011831.1\|WP_015942331.1\|4438444_4440277_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379405
NC_011831.1\|WP_015942323.1\|4428189_4429302_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223582
NC_011831.1\|WP_015942319.1\|4423322_4424126_+\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224042

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015942335.1\|4444421_4445321_-\|UV-damage-repair-endonuclease	gnl\|CDD\|235029	PRK02308, uvsE, putative UV damage endonuclease; Provisional.	1.00485e-37
NC_011831.1\|WP_015942338.1\|4447578_4448178_-\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	2.50043e-57
NC_011831.1\|WP_015942336.1\|4445438_4446683_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.50034e-16
NC_011831.1\|WP_015942320.1\|4424414_4424600_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	6.36833e-22
NC_011831.1\|WP_015942337.1\|4446757_4447510_-\|ribonuclease-PH	gnl\|CDD\|178914	PRK00173, rph, ribonuclease PH; Reviewed.	1.23222e-138
NC_011831.1\|WP_015942322.1\|4425552_4428141_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NC_011831.1\|WP_015942333.1\|4441621_4443439_-\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	gnl\|CDD\|274738	TIGR03710, OAFO_sf, 2-oxoacid:acceptor oxidoreductase, alpha subunit. This family of proteins contains a C-terminal thiamine diphosphate (TPP) binding domain typical of flavodoxin/ferredoxin oxidoreductases (pfam01855) as well as an N-terminal domain similar to the gamma subunit of the same group of oxidoreductases (pfam01558). The genes represented by this model are always found in association with a neighboring gene for a beta subunit (TIGR02177) which also occurs in a 4-subunit (alpha/beta/gamma/ferredoxin) version of the system. This alpha/gamma plus beta structure was used to define the set of sequences to include in this model. This pair of genes is not consistantly observed in proximity to any electron acceptor genes, but is found next to putative ferredoxins or ferredoxin-domain proteins in Azoarcus sp. EbN1, Bradyrhizobium japonicum USDA 110, Frankia sp. CcI3, Rhodoferax ferrireducens DSM 15236, Rhodopseudomonas palustris BisB5, Os, Sphingomonas wittichii RW1 and Streptomyces clavuligerus. Other potential acceptors are also sporadically observed in close proximity including ferritin-like proteins, reberythrin, peroxiredoxin and a variety of other flavin and iron-sulfur cluster-containing proteins. The phylogenetic distribution of this family encompasses archaea, a number of deeply-branching bacterial clades and only a small number of firmicutes and proteobacteria. The enzyme from Sulfolobus has been characterized with respect to its substrate specificity, which is described as wide, encompassing various 2-oxoacids such as 2-oxoglutarate, 2-oxobutyrate and pyruvate. The enzyme from Hydrogenobacter thermophilus has been shown to have a high specificity towards 2-oxoglutarate and is one of the key enzymes in the reverse TCA cycle in this organism. Furthermore, considering its binding of coenzyme A, it can be reasonably inferred that the product of the reaction is succinyl-CoA. The genes for this enzyme in Prevotella intermedia 17, Persephonella marina EX-H1 and Picrophilus torridus DSM 9790 are in close proximity to a variety of TCA cycle genes. Persephonella marina and P. torridus are believed to encode complete TCA cycles, and none of these contains the lipoate-based 2-oxoglutarate dehydrogenase (E1/E2/E3) system. That system is presumed to be replaced by this one. In fact, the lipoate system is absent in most organisms possessing a member of this family, providing additional circumstantial evidence that many of these enzymes are capable of acting as 2-oxoglutarate dehydrogenases and.	0
NC_011831.1\|WP_015942332.1\|4440496_4441531_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	gnl\|CDD\|235604	PRK05778, PRK05778, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated.	3.76625e-149
NC_011831.1\|WP_015942321.1\|4424701_4425556_+\|DegV-family-protein	gnl\|CDD\|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	7.17117e-88
NC_011831.1\|WP_015942324.1\|4429417_4430488_+\|ATP-dependent-6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	1.99852e-153
NC_011831.1\|WP_015942325.1\|4430530_4431019_+\|hypothetical-protein	gnl\|CDD\|176871	cd08862, SRPBCC_Smu440-like, Ligand-binding SRPBCC domain of Streptococcus mutans Smu.440 and related proteins. This family includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of Streptococcus mutans Smu.440 and related proteins. This domain belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. Streptococcus mutans is a dental pathogen, and the leading cause of dental caries. In this pathogen, the gene encoding Smu.440 is in the same operon as the gene encoding SMU.441, a member of the MarR protein family of transcriptional regulators involved in multiple antibiotic resistance. It has been suggested that SMU.440 is involved in polyketide-like antibiotic resistance.	6.0799e-33
NC_011831.1\|WP_015942334.1\|4443597_4444341_-\|peptidylprolyl-isomerase	gnl\|CDD\|238194	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP, whose isomerization or chaperoning activities may play a role in RNA splicing. .	7.48725e-64
NC_011831.1\|WP_015942331.1\|4438444_4440277_+\|hypothetical-protein	gnl\|CDD\|379405	pfam13941, MutL, MutL protein. This small family includes, GlmL/MutL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family.	1.08969e-84
NC_011831.1\|WP_015942323.1\|4428189_4429302_+\|hypothetical-protein	gnl\|CDD\|223582	COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion].	4.70909e-28
NC_011831.1\|WP_015942319.1\|4423322_4424126_+\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	0

>NC_011831.1|WP_015942328.1|4432237_4432906_+|hypothetical-protein
MSSLLRNPRQLIAVLIAGVSGLIVLLDFVGSGPVVKALAMVLVQWAALITAFAVVIGAVSVFSAHLRRVRARAPEAGYSLVLIIGMVIVIVAGIFYPTRTATGLTLPMTLAAPPIRTVFRLIYEPLAASLLALLAFFALSAMLRALRSGRTEAIVVVSIALLALVIQLPPLTFIPFIGQMVQWLNDYLVAAGARGLLLGSAIGALIAGVRLLIGFDMPYADR
>NC_011831.1|WP_015942327.1|4431438_4432233_+|hypothetical-protein
MTLPAIFLLVALAIVVAFVWLHHARVLAGRLPVRRSLPALDALRMALARSAETGRAVHLSPGASTIGAGEGQRASTAELLAGLQVVRQAGEQAAASGSAVVISSADAVAYFSLRGAIRQAYRGVGQPQAFDPRRIELWAHADPLAYAAAVAAHYHREPLEASTMVGVFGPEVLLAAEIGAQQQIPQVLGSTNPASLGVMSVVTPYVLIGEEIFVTEAYLTTASAPQARLLTHDTLRVTVIGLMVLAFGYGVIRAVFGLPALPGW
>NC_011831.1|WP_041471171.1|4431035_4431221_+|hypothetical-protein
MPVAIVLQIVAPLDVVCSQGAQALLPLVRGTRWAGVVESLTIPEHWPALRDLLLARLQERG
>NC_011831.1|WP_015942325.1|4430530_4431019_+|hypothetical-protein
MIRYEIAATTVTTAPPERVFAVLDDFSNWPRWMPSLERVRIELPPNDHPRQGYRFKLHGMFVHAEMEVIDYTPLSRATRFRISFPPFQGINRCRLVPLDDGRYRIERLDQLELPDLVAHVIDATQRKRFEQLALEFLHALRRVVEQTPNGTITSSSPTGQSD
>NC_011831.1|WP_015942324.1|4429417_4430488_+|ATP-dependent-6-phosphofructokinase
MASKKQRIGVLTSGGDAPGLNAVIRAVVKSASSLGWEVIGIHDGFEGLLGTKSYRVLTNADVQGLLPRGGTILRTTNKGHFGPRRSDELSEADPYVRAVKAIEEMGLRALITIGGEGTQRIALELHKLGAPVIGVPKTIDNDLAGTDRTFGFDTALQVATDAIDRLHTTAASHNRVMVLEVMGRHTGWIALHAGLAGGADVILIPEIPFTIERVAEKVHARDAQGSAFSIIVVAEGARPRGGSEMYIAEGRLGGIGHWVGEQLERLTGKDVRVVVLGHLQRGGSPSPYDRLLSTRYGAAAVQAAARGIYGEMVALRGQDIVTVPLAEACGYLNRVRPHSDLVLCARSLGIVFGDEL
>NC_011831.1|WP_015942323.1|4428189_4429302_+|hypothetical-protein
MQTQTITLPAALGEATLLEWLATVGETVTPTTPLVRVLTADAEWAVPAQVAGVLVEQLASAGARLSGGAALAHYVPPRRVRATPLARRIAGALGIDLATLNGSGPGGRIGRADVLAAAGMLVEAAAAPAANVSTPTDALAPIAQPVASDNGSVQMAPMSTEAVATLSQVVTSDRVPLAGATIAVNLQPLLQRCATQTAEFVTRGLQATPLSALVAAAAALFPLHPFLNAAWAETAIMLRHRYHTAVCLSDGRWVLIRDAGDLTERGIARMLARTDTTNDLAEATFSIVATTGWWRFAPPLPGTAAALTLSEAQRQPIAFNATTLVVGAVAQLSLCYDARILDHLAAMAFLRDLCHRLGVETLSSCTDPNR
>NC_011831.1|WP_015942322.1|4425552_4428141_+|ATP-dependent-DNA-helicase-RecG
MTESEQQQVTVLGKMLSAERRDGCADRVADSGLSAFIRQWSATAGSAATLPAVQRAIGLLVGYERMTHAERDQALATAIEELRSLFRTNHPTPALATTAPVTLPSLAPRRTSSRQERQRLASDKHPLTDLDLDAKLDQIAGVDSRTVASFRRIGVVTIRDLLYHFPRRYDDVRSRRTIDELQVGAEETVIGEVTDVRTIGTGPKLRVRVEVSDETGSIEAIFFNQRWIAQQIRVGQTIVLSGKVTVFGGKRQFTSPRWERYTPDPDALLHTGRLVPIHPLTQGLHENQARRLIKQVVDTVAPRIPDHLPPERCAQAGLLPLGEALTQIHFPTNHESLAAARRRLGFDEFLFIQLGVLQRKRLWQQEMGLPFTIDLQVHAELLRLLPFRLTAAQQRAINEIFADLQRPSPMARLLQGDVGSGKTVVAAAALLQAVANGFQGALMAPTEILAEQHAKNLKQLLSRVPVPRRSSEAMDGEQYRQTDWRAQLDPEEAARLNEIVQIIGMTPEEDMGGHGVRVALLTGSLGTRERRRVLDGIARGEIDVVVGTHALITETVQFARLGLVVVDEQHRFGVEQRLRLKNKGCNPHMLVMTATPIPRTLTLTIYGDLDVSVLDERPPGRQEIRTRRISRLEREKAYRHIRKQVAEGRQVYVICPLVEESEKLDLPSAEEMYEKLQHEVFPDLRVALLHGKMSAREKDGVMRAFRDHQYDILVSTAVIEVGIDVPNATTIVIEGAERFGLAQLHQFRGRVGRGSHQSYCILISDSDNQQSKERLAALEQTNDGFQLAEFDLQLRGPGEFFGTRQSGTPDLKMARQGDTRLLSEARRMAEAILSDDPALERPEHALLRRRVDAFWTEAMRAG
>NC_011831.1|WP_015942321.1|4424701_4425556_+|DegV-family-protein
MALMKVVTDGASDIPFDVTRELDIEVVPLSARIDDRLYRIGIDISEDQVYDLLFNGHDRVEIVKPTATTFEQLYRSLLGRYDYVFSIHLSHRLGTILSEAQAGRSRLPASNTRIEIIDSKLVGMGLGSIAIAAARAIRDGHTPAEVSELIGQTIRHTHTAFFVDTMEYLEQSGLLTFSSSLIGSMQRIKPLMILDEGEIVPYERTRTRAKAIEGLFTFVEDFPHVEDVIIHYATTPEDVEKLLEKLDPIFPRDRVQVSRMGPAIASRLGPGAMAVTVFEGFDEE
>NC_011831.1|WP_015942320.1|4424414_4424600_-|50S-ribosomal-protein-L28
MAKCELCGKKPSFGHNVSFSKRRTNRVWQPNIQKTTLMAPGGKPVQVRICTQCMRTLAKTR
>NC_011831.1|WP_015942319.1|4423322_4424126_+|phosphate-ABC-transporter-ATP-binding-protein
MTVVHDMDRNNPNALEARNMNVYYGSFRAVKNVNLAIEKNRITALIGPSGCGKSTVLRSFNRMNDLVPSARVEGEILFHGENIYAPGVDPVNVRRRIGMVFQKPNPFPKSIYDNVAYGPRINGWKLSKREMDELVERALRGAALWDEVKDKLHQNGLSLSGGQQQRLCIARALAVEPEVILMDEPCSALDPISTLKIEELMFELRQNYTIIIVTHNMQQASRASDYTAFFLMDSDRAGQLVEYGPTAQIFQNPKDERTEQYISGRFG
>NC_011831.1|WP_015942330.1|4437787_4438435_+|hypothetical-protein
MDLAINLIPVLLTLLVFSRLFGDTPAFRLVQYLFVGVALGYAVVVIYHQVLRPAVVDLLLASGQPGLVTLRLIPFVLAALLLTRVSGQQTNSWLANLPLALVFGVGAALVVGGALIGTIMPQVLDATRLDLSAPAAILGSLVLFIGSIVTLLSFSFTRSADPRRQRWLDSTARVGRWFLLIAFGFFLAGNVSSYLAALNERLLFVVEWFRAVLGA
>NC_011831.1|WP_015942331.1|4438444_4440277_+|hypothetical-protein
MSTVRAVLVVEIGSVTTRVSLIDQVDGESRLIGQAETLTSCELPYQNIFFAIQEATAQIADLTSRQLLHDGRLLMPQTIAGDGIDAVVVVASALEPLRVVVAAIAADVSARSALHAVQGVPGVVLAVITLDDTLGHPPAVEDRSWLERQLETLLPLSPDVIVVTGGVEGGATDSVIRLVQLVNLVLAFKQTTGEPLPTIVYAGNTAAQAQVQVALAEYKNNVLMVANVRPELEREVLAPLRRALLARYARQLTDLPGLNALTVEHTTLHTVVEAQYLMTRFWAERQRQPVLYVDVGATTTTLIAAAPDQVHAAIHGVRGTAYGAAHVLSEIGPAALARWLPFAMTEQELTERVLNRVLRPQTIPATREECYLDLALTRAVLTLGMAALRDEAPTLEYSYVIASGGALIHAPHPGMALLALLDGLQPANELPGLLLHVHLDTFGLMSVCGGLATLHPEAALSVFDHDLLLNTPLATCIVLQGSGRPGELVAEVELIAVGGDTEYAQVCSGDLVRLPLPIGRYAQVKVKLTPGVRVGRDVSGEPVASDPAEVPGSLLGLIIDARGRPLSLPEDGAERRRLLWSWLRALDAERSDSPYPEPEIALPEHRGVGG
>NC_011831.1|WP_015942332.1|4440496_4441531_-|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta
MTQQTINAIGLTKADYRGAPSTLCAGCGHDSVASQIITAAFELSLQPHTVIRMSGIGCSSKSAAYFLGRSHGFNSLHGRMPSVTTGAHLANHTLRPLAVSGDGDTASIGLGQFIHLLRRNVPIVYIVENNGVYGLTKGQFSATADEGQELKHAGVNHLPPIDVCTEAILAGCGFVARSFAGDAKQVRELIKAAFNFHGAAVIDVISPCVTFNNHDRSTKSYTYGKTHESPLHDISFIPHYEEVTVDYEPGEVRDVQLHDGPVIRLRKLSHDHDPSNRMAALQLLEQARASGEFVTGLIYLNEQRPTLAETLSIGPTPIAALPEDRLRPTREAFAAVMADLTRER
>NC_011831.1|WP_015942333.1|4441621_4443439_-|2-oxoacid:acceptor-oxidoreductase-subunit-alpha
MQFSQSTVNEFAITAATINGSGSQTANMVLMRAIFLMGIPVSGKNLFPSNIQGEPTWYTLRVSQAGYTARPAQSQLLVAFNPRTANDDLANLVTGGICLYPADGPWQPQRSDIIPVALPVRQLLEQTGVSQRLRTYAANMVYVGALAALLGITDTALVKAVQHQFRGKATTVELNLAVIRAAKEWMSNTDTPAHGRFRVEPLAATTDLMLIDGNTAAAIGAITGGVGVVAWYPITPSTSLIESLESYLPRLRDHNQGATCAIVQAEDEIAALGIVIGAGWAGARAMTATSGPGISLMTEFAGLGFFAEIPAVIWDVQRVGPSTGLPTRTAQGDLLSVYYLGHGDTRHVVLLPGTMEECYSDAQQAFDLAEYLQTPVFVLSDLDLGMNIWMSRPFTYPEQPLQRGKVLSAEDLAKLTTYARFADVDGDGIGYRTLPGNPHPLAATLSRGTGHNERNVYSERPEDWQRNMARLWRKHETARRLVPRPVIDAHPEATIGLIGFGSTAPAIAEARDLLAATGIVTSSMRVRALPLGPEVTDFIARHRYCVVIEQNHDGQLRQLLQLHCPAYATRLGSVAWCDGLPLTAPFVRDQVLHVLEQMHVTTPIM
>NC_011831.1|WP_015942334.1|4443597_4444341_-|peptidylprolyl-isomerase
MSTQRPSSTPNPMTGLIAIAILLIILGLVAGLLISRAAPPTATPSPTTPPAPPTAAPVATPTPAASTMPIMPTATTYRYNSPPPMTIDPAKKYTATIYTPRGEIVIELLPDIAPQTVNNFVFLARQNFYNGLTWHRVLPNFMAQGGDPNGDGTGGPGYTIPAEFTDKILFDQPGIVAMARSTDPNSAGSQFFITTAPAPWLNEQYTIFGRVIKGQEIVDGIPLRDPNNPADLATPGETILGITISEE
>NC_011831.1|WP_015942335.1|4444421_4445321_-|UV-damage-repair-endonuclease
MIRLGFAVRTVQQPGLAGGAPLHLSVLLTQLGDLLSYLERRAIRFYRFAAPRHITPADLADCATQLALLSQRLSTQQIRLGLHLDPHLNLSHPDDRVAAETISTIEMATHLLVALDQPNTITHTLVIHAGAGDAEALLRLTRRWSALSAPARRRTTIEHNSSGPSLRLLLTLAARIGIPIVFDYLHFHLHNPDRWSLPLALGLSLATWPRDVRPEVHLSSQRSEAHLLPGRNGTTRVLPPRPGQHADFIVAQDALDLLAASRGLPPFDLMLEAKAGDLALLRLRHDLHRYAPEWEACVQ
>NC_011831.1|WP_015942336.1|4445438_4446683_-|tetratricopeptide-repeat-protein
MTDEMKRVASRRHLRYGLAFERTQRPLAALEQFRRAIAADPTMRDAHNALAFHYQQQGLLAKAADTFAAVATLADDYFAHFNLGFVLIELERYDEAEREFQRCLELDPNDTAAQLELAYIYAARGEYAKAVTMLEKPRQRYYDDWAVFHLLGRCLFQLQQFDEAQQAWQHALALAPHAEAQFDLLACLQSIERRREFHTCTGLKDDLYVHEGVICLGSAMDDGITIHPLHNYHLREHDIVRTIQRFVALARSSKWQLGGIVAPDLTSKPLAAALAQLLELPLLNLHHLPNITTPILLVIAVGHSADLFTIARERLPIPSPGFCLAVNWMKHSPLWPEVVGVVVEGVCTVPWADELRGLSSAEQMTVIQRIADRLAAQVQYVSGEENLPRQIRYYTRHHRRLAINSLLPTTKPRL
>NC_011831.1|WP_015942337.1|4446757_4447510_-|ribonuclease-PH
MVRRDGRAPDQLRPITIEIGAAPYAEGSALIAYGNTRVLCTATIEDGVPAWMRGQQGGWVTAEYAMLPRATLQRSRRERNGPSGRTQEIQRLIGRALRAAIDLHAIGERTITIDCDVLQADGGTRTASISGGYVALALAVDHLVRSGAVETYPTLTPLAAVSVGMIQDTLLLDLCYEEDSQADLDCNVVMNINSAFVEVQATAERTPVSRAQLDALLDLAARGIQQILATQAAALATVLPNNAMSSSASP
>NC_011831.1|WP_015942338.1|4447578_4448178_-|DNA-3-methyladenine-glycosylase-2-family-protein
MEQALNYLCTVDPVLAPWIDQIGSFALQRQPHSFATLAYAIISQQLSLNAARAIRDRLTTLLGELTPEQILAADTTALRAAGLSMQKSGYLRDLAERIVYGQINLELLPTLDDETAIAMLTNVRGIGRWTAEIYLMFALNRLDILPADDLGLRDGARLVYQLPQILSPRELRALGERWRPYRSIACWYLWQIRHIMSKS
>NC_011831.1|WP_041470744.1|4448189_4448468_+|hypothetical-protein
MIVHGDDGFAVSRQDTLQCSMTIVLDVNENGDRGDCFGIASLMPRPRELSVTHHRVVAPGKTDLTYSDWLVLVRDTIRVLGNDGVIGSYRLI

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Crispr_ID: NC_011831_40

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011831_40

4440328-4440457

Unclear

Consensus_repeat	Method
ACGGATAGAACGGATAGCCACGGATGGTTCAGAATGGCGCGAT	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NC_011831_40

>merge|NC_011831|40|4440328-4440457|CRISPRCasFinder
ACGGATAGAACGGATAGCCACGGATGGTTCAGAATGGCGCGATAGATCCGTTGCAATCCGTGTACTCTTGGTCAGACCACGGATAGAACGGATAGAACGGATAGCCACGGATGGTTCAGAATGGCGCGAT

>NC_011831|40|34|4440328-4440457|CRISPRCasFinder
ACGGATAGAACGGATAGCCACGGATGGTTCAGAATGGCGCGAT	AGATCCGTTGCAATCCGTGTACTCTTGGTCAGACCACGGATAGA
ACGGATAGAACGGATAGCCACGGATGGTTCAGAATGGCGCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_011831.1\|WP_015942335.1\|4444421_4445321_-\|UV-damage-repair-endonuclease	unknown	unknown	gnl\|CDD\|235029
NC_011831.1\|WP_157044904.1\|4448539_4448713_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_041471171.1\|4431035_4431221_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942330.1\|4437787_4438435_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942336.1\|4445438_4446683_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NC_011831.1\|WP_015942340.1\|4448825_4450001_+\|zinc-dependent-metalloprotease	unknown	unknown	gnl\|CDD\|274833
NC_011831.1\|WP_041470744.1\|4448189_4448468_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942322.1\|4425552_4428141_+\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NC_011831.1\|WP_015942333.1\|4441621_4443439_-\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	unknown	unknown	gnl\|CDD\|274738
NC_011831.1\|WP_015942332.1\|4440496_4441531_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	unknown	unknown	gnl\|CDD\|235604
NC_011831.1\|WP_015942337.1\|4446757_4447510_-\|ribonuclease-PH	unknown	unknown	gnl\|CDD\|178914
NC_011831.1\|WP_015942328.1\|4432237_4432906_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942324.1\|4429417_4430488_+\|ATP-dependent-6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NC_011831.1\|WP_015942325.1\|4430530_4431019_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176871
NC_011831.1\|WP_015942327.1\|4431438_4432233_+\|hypothetical-protein	unknown	unknown	unknown
NC_011831.1\|WP_015942334.1\|4443597_4444341_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|238194
NC_011831.1\|WP_015942338.1\|4447578_4448178_-\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|223200
NC_011831.1\|WP_015942331.1\|4438444_4440277_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379405
NC_011831.1\|WP_015942323.1\|4428189_4429302_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223582
NC_011831.1\|WP_015942329.1\|4432937_4437788_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090

Protein	Function_ID	Function_description	E-value
NC_011831.1\|WP_015942335.1\|4444421_4445321_-\|UV-damage-repair-endonuclease	gnl\|CDD\|235029	PRK02308, uvsE, putative UV damage endonuclease; Provisional.	1.00485e-37
NC_011831.1\|WP_015942338.1\|4447578_4448178_-\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	2.50043e-57
NC_011831.1\|WP_015942336.1\|4445438_4446683_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.50034e-16
NC_011831.1\|WP_015942340.1\|4448825_4450001_+\|zinc-dependent-metalloprotease	gnl\|CDD\|274833	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated. A phylogenetic tree of the DUF2342 family (TIGR03624) consists of two major branches. One of these branches, modeled here, is observed almost entirely to be found in coenzyme F420 biosynthesizing species of the Actinobacterial, Chloroflexi and Archaeal lineages. The few organisms having genes within this family and lacking F420 biosynthesis may either have an undiscovered F420 transporter, or may represent F420-to-FMN revertants. This family includes a Chloroflexus Aurantiacus protein whose crystal structure has been determined (PDB:3CMN_A). This has been annotated as a putative hydrolase, but the support for that assertion is untraceable. There is no cofactor present in the structure.	3.02107e-146
NC_011831.1\|WP_015942322.1\|4425552_4428141_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NC_011831.1\|WP_015942333.1\|4441621_4443439_-\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	gnl\|CDD\|274738	TIGR03710, OAFO_sf, 2-oxoacid:acceptor oxidoreductase, alpha subunit. This family of proteins contains a C-terminal thiamine diphosphate (TPP) binding domain typical of flavodoxin/ferredoxin oxidoreductases (pfam01855) as well as an N-terminal domain similar to the gamma subunit of the same group of oxidoreductases (pfam01558). The genes represented by this model are always found in association with a neighboring gene for a beta subunit (TIGR02177) which also occurs in a 4-subunit (alpha/beta/gamma/ferredoxin) version of the system. This alpha/gamma plus beta structure was used to define the set of sequences to include in this model. This pair of genes is not consistantly observed in proximity to any electron acceptor genes, but is found next to putative ferredoxins or ferredoxin-domain proteins in Azoarcus sp. EbN1, Bradyrhizobium japonicum USDA 110, Frankia sp. CcI3, Rhodoferax ferrireducens DSM 15236, Rhodopseudomonas palustris BisB5, Os, Sphingomonas wittichii RW1 and Streptomyces clavuligerus. Other potential acceptors are also sporadically observed in close proximity including ferritin-like proteins, reberythrin, peroxiredoxin and a variety of other flavin and iron-sulfur cluster-containing proteins. The phylogenetic distribution of this family encompasses archaea, a number of deeply-branching bacterial clades and only a small number of firmicutes and proteobacteria. The enzyme from Sulfolobus has been characterized with respect to its substrate specificity, which is described as wide, encompassing various 2-oxoacids such as 2-oxoglutarate, 2-oxobutyrate and pyruvate. The enzyme from Hydrogenobacter thermophilus has been shown to have a high specificity towards 2-oxoglutarate and is one of the key enzymes in the reverse TCA cycle in this organism. Furthermore, considering its binding of coenzyme A, it can be reasonably inferred that the product of the reaction is succinyl-CoA. The genes for this enzyme in Prevotella intermedia 17, Persephonella marina EX-H1 and Picrophilus torridus DSM 9790 are in close proximity to a variety of TCA cycle genes. Persephonella marina and P. torridus are believed to encode complete TCA cycles, and none of these contains the lipoate-based 2-oxoglutarate dehydrogenase (E1/E2/E3) system. That system is presumed to be replaced by this one. In fact, the lipoate system is absent in most organisms possessing a member of this family, providing additional circumstantial evidence that many of these enzymes are capable of acting as 2-oxoglutarate dehydrogenases and.	0
NC_011831.1\|WP_015942332.1\|4440496_4441531_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	gnl\|CDD\|235604	PRK05778, PRK05778, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated.	3.76625e-149
NC_011831.1\|WP_015942337.1\|4446757_4447510_-\|ribonuclease-PH	gnl\|CDD\|178914	PRK00173, rph, ribonuclease PH; Reviewed.	1.23222e-138
NC_011831.1\|WP_015942324.1\|4429417_4430488_+\|ATP-dependent-6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	1.99852e-153
NC_011831.1\|WP_015942325.1\|4430530_4431019_+\|hypothetical-protein	gnl\|CDD\|176871	cd08862, SRPBCC_Smu440-like, Ligand-binding SRPBCC domain of Streptococcus mutans Smu.440 and related proteins. This family includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of Streptococcus mutans Smu.440 and related proteins. This domain belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. Streptococcus mutans is a dental pathogen, and the leading cause of dental caries. In this pathogen, the gene encoding Smu.440 is in the same operon as the gene encoding SMU.441, a member of the MarR protein family of transcriptional regulators involved in multiple antibiotic resistance. It has been suggested that SMU.440 is involved in polyketide-like antibiotic resistance.	6.0799e-33
NC_011831.1\|WP_015942334.1\|4443597_4444341_-\|peptidylprolyl-isomerase	gnl\|CDD\|238194	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP, whose isomerization or chaperoning activities may play a role in RNA splicing. .	7.48725e-64
NC_011831.1\|WP_015942331.1\|4438444_4440277_+\|hypothetical-protein	gnl\|CDD\|379405	pfam13941, MutL, MutL protein. This small family includes, GlmL/MutL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family.	1.08969e-84
NC_011831.1\|WP_015942323.1\|4428189_4429302_+\|hypothetical-protein	gnl\|CDD\|223582	COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion].	4.70909e-28
NC_011831.1\|WP_015942329.1\|4432937_4437788_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.87916e-07

>NC_011831.1|WP_015942331.1|4438444_4440277_+|hypothetical-protein
MSTVRAVLVVEIGSVTTRVSLIDQVDGESRLIGQAETLTSCELPYQNIFFAIQEATAQIADLTSRQLLHDGRLLMPQTIAGDGIDAVVVVASALEPLRVVVAAIAADVSARSALHAVQGVPGVVLAVITLDDTLGHPPAVEDRSWLERQLETLLPLSPDVIVVTGGVEGGATDSVIRLVQLVNLVLAFKQTTGEPLPTIVYAGNTAAQAQVQVALAEYKNNVLMVANVRPELEREVLAPLRRALLARYARQLTDLPGLNALTVEHTTLHTVVEAQYLMTRFWAERQRQPVLYVDVGATTTTLIAAAPDQVHAAIHGVRGTAYGAAHVLSEIGPAALARWLPFAMTEQELTERVLNRVLRPQTIPATREECYLDLALTRAVLTLGMAALRDEAPTLEYSYVIASGGALIHAPHPGMALLALLDGLQPANELPGLLLHVHLDTFGLMSVCGGLATLHPEAALSVFDHDLLLNTPLATCIVLQGSGRPGELVAEVELIAVGGDTEYAQVCSGDLVRLPLPIGRYAQVKVKLTPGVRVGRDVSGEPVASDPAEVPGSLLGLIIDARGRPLSLPEDGAERRRLLWSWLRALDAERSDSPYPEPEIALPEHRGVGG
>NC_011831.1|WP_015942330.1|4437787_4438435_+|hypothetical-protein
MDLAINLIPVLLTLLVFSRLFGDTPAFRLVQYLFVGVALGYAVVVIYHQVLRPAVVDLLLASGQPGLVTLRLIPFVLAALLLTRVSGQQTNSWLANLPLALVFGVGAALVVGGALIGTIMPQVLDATRLDLSAPAAILGSLVLFIGSIVTLLSFSFTRSADPRRQRWLDSTARVGRWFLLIAFGFFLAGNVSSYLAALNERLLFVVEWFRAVLGA
>NC_011831.1|WP_015942329.1|4432937_4437788_+|hypothetical-protein
MEHLPPWLRNVPLPPAPDEDDSTPAWLRGIDSLTPPPPPAAAAPPDWLTADEPTAEATSVPDWLAELQAEVSDPLADAQSAAWLRDADSGSSGEAVPPVEPPLTTSSRLRMPIGPTDLLRSIGYEEALEPTSEPPLEPEAPVDADVDTGVPDWLRELSDEEITEAFATTPSEPSLSTSEPAAAVDSVSEPALDDWLKELDRIVPETSSTDWSAGVAPGDETVFSPDAPAWLDSDQSAAGGASAFDLPPWLQNVAGDEPPVVAGSVRLDLPTWLLDDNIIASDPSTTTPPVAPDAPTLLADSNAVSPDTGAVDRGNASWSPDEGVADAEDVPTWLLEAERQVLPPADADAAPAWLQAEEPAAPTSDVPAWLRTEEPTAPTSDVPVWLQAEEPADAAPAWLQAEEPAAPTSDVPAWLRAEEPADAAPAWLQAEEPAAPTSDVPVWLQAEEPADAAPAWLQAEEPAAPTSDVPAWLQAEEPADAAPAWLRAEEPARDTSSEIPTWLREADASDLSAWEKTEPARASGLDWLQAEEPADAAPAWLQAEEPAAPTSDVPAWLRAEEPADAAPAWLQAEEPAAPTSDVPAWLRTEEPTAPTSDVPAWLRTEEPTAPTSDVPAWLQAEEPAAPTSDVPAWLRAEEPADAAPAWLQAEEPAAPTSDVPAWLQAEEPAAPTSDVPAWLRAEEPTAPTSDVPAWLQAEEPARDTSSEIPTWLREADASDLSAWEKTEPARASGLDWLQAEEPADAAPAWLQAEEPAAPTSDVPAWLRAEEPTASTSDVPAWLRAEEPTAPTSDVPAWLRTEEPPASTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRTEEPPASTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLQAEEPAAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRTEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLQAEEPTAPTSDVPAWLQAEEPAAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRAEEPTAPTSDVPAWLRESGASTADTPDWLIGGEQTEDLPWLQAEPSALSVTAEPSTTTSSSSDEFFSGAELPPWLRASTERIVEPAATPSLSWLQRLSSREAELEDEASAPEVVVVKPPLPMPAPRTPDQVAAMALLERLIQSPLPQPVPVEQPTVVRRRLPKLEHWLAWVLLVAVLVSLLIPGLPNPLMGQVQPSPTAIALSERLTALGSDDVVLVAYEWGAQRVAELRPLEQALFKQLTVDRTKLIIVSTDLQGAILAFDQLGPLRAAGYNNENGVTFGGRDYVLLGYRPGGELALRSIAGDLRAQLRRDYTGQDATAGLLATRPDGSPRVETLADLAMIVVMADQVQDVQAWMEQIHSAAPQVPIAFLLPQEVYPQVLPYLRLPNVYAVAGQRGAAELRAASGTDEVVSTMVANQTWATIMFVIVMMVGGVIVIIERLRRPARGSA
>NC_011831.1|WP_015942328.1|4432237_4432906_+|hypothetical-protein
MSSLLRNPRQLIAVLIAGVSGLIVLLDFVGSGPVVKALAMVLVQWAALITAFAVVIGAVSVFSAHLRRVRARAPEAGYSLVLIIGMVIVIVAGIFYPTRTATGLTLPMTLAAPPIRTVFRLIYEPLAASLLALLAFFALSAMLRALRSGRTEAIVVVSIALLALVIQLPPLTFIPFIGQMVQWLNDYLVAAGARGLLLGSAIGALIAGVRLLIGFDMPYADR
>NC_011831.1|WP_015942327.1|4431438_4432233_+|hypothetical-protein
MTLPAIFLLVALAIVVAFVWLHHARVLAGRLPVRRSLPALDALRMALARSAETGRAVHLSPGASTIGAGEGQRASTAELLAGLQVVRQAGEQAAASGSAVVISSADAVAYFSLRGAIRQAYRGVGQPQAFDPRRIELWAHADPLAYAAAVAAHYHREPLEASTMVGVFGPEVLLAAEIGAQQQIPQVLGSTNPASLGVMSVVTPYVLIGEEIFVTEAYLTTASAPQARLLTHDTLRVTVIGLMVLAFGYGVIRAVFGLPALPGW
>NC_011831.1|WP_041471171.1|4431035_4431221_+|hypothetical-protein
MPVAIVLQIVAPLDVVCSQGAQALLPLVRGTRWAGVVESLTIPEHWPALRDLLLARLQERG
>NC_011831.1|WP_015942325.1|4430530_4431019_+|hypothetical-protein
MIRYEIAATTVTTAPPERVFAVLDDFSNWPRWMPSLERVRIELPPNDHPRQGYRFKLHGMFVHAEMEVIDYTPLSRATRFRISFPPFQGINRCRLVPLDDGRYRIERLDQLELPDLVAHVIDATQRKRFEQLALEFLHALRRVVEQTPNGTITSSSPTGQSD
>NC_011831.1|WP_015942324.1|4429417_4430488_+|ATP-dependent-6-phosphofructokinase
MASKKQRIGVLTSGGDAPGLNAVIRAVVKSASSLGWEVIGIHDGFEGLLGTKSYRVLTNADVQGLLPRGGTILRTTNKGHFGPRRSDELSEADPYVRAVKAIEEMGLRALITIGGEGTQRIALELHKLGAPVIGVPKTIDNDLAGTDRTFGFDTALQVATDAIDRLHTTAASHNRVMVLEVMGRHTGWIALHAGLAGGADVILIPEIPFTIERVAEKVHARDAQGSAFSIIVVAEGARPRGGSEMYIAEGRLGGIGHWVGEQLERLTGKDVRVVVLGHLQRGGSPSPYDRLLSTRYGAAAVQAAARGIYGEMVALRGQDIVTVPLAEACGYLNRVRPHSDLVLCARSLGIVFGDEL
>NC_011831.1|WP_015942323.1|4428189_4429302_+|hypothetical-protein
MQTQTITLPAALGEATLLEWLATVGETVTPTTPLVRVLTADAEWAVPAQVAGVLVEQLASAGARLSGGAALAHYVPPRRVRATPLARRIAGALGIDLATLNGSGPGGRIGRADVLAAAGMLVEAAAAPAANVSTPTDALAPIAQPVASDNGSVQMAPMSTEAVATLSQVVTSDRVPLAGATIAVNLQPLLQRCATQTAEFVTRGLQATPLSALVAAAAALFPLHPFLNAAWAETAIMLRHRYHTAVCLSDGRWVLIRDAGDLTERGIARMLARTDTTNDLAEATFSIVATTGWWRFAPPLPGTAAALTLSEAQRQPIAFNATTLVVGAVAQLSLCYDARILDHLAAMAFLRDLCHRLGVETLSSCTDPNR
>NC_011831.1|WP_015942322.1|4425552_4428141_+|ATP-dependent-DNA-helicase-RecG
MTESEQQQVTVLGKMLSAERRDGCADRVADSGLSAFIRQWSATAGSAATLPAVQRAIGLLVGYERMTHAERDQALATAIEELRSLFRTNHPTPALATTAPVTLPSLAPRRTSSRQERQRLASDKHPLTDLDLDAKLDQIAGVDSRTVASFRRIGVVTIRDLLYHFPRRYDDVRSRRTIDELQVGAEETVIGEVTDVRTIGTGPKLRVRVEVSDETGSIEAIFFNQRWIAQQIRVGQTIVLSGKVTVFGGKRQFTSPRWERYTPDPDALLHTGRLVPIHPLTQGLHENQARRLIKQVVDTVAPRIPDHLPPERCAQAGLLPLGEALTQIHFPTNHESLAAARRRLGFDEFLFIQLGVLQRKRLWQQEMGLPFTIDLQVHAELLRLLPFRLTAAQQRAINEIFADLQRPSPMARLLQGDVGSGKTVVAAAALLQAVANGFQGALMAPTEILAEQHAKNLKQLLSRVPVPRRSSEAMDGEQYRQTDWRAQLDPEEAARLNEIVQIIGMTPEEDMGGHGVRVALLTGSLGTRERRRVLDGIARGEIDVVVGTHALITETVQFARLGLVVVDEQHRFGVEQRLRLKNKGCNPHMLVMTATPIPRTLTLTIYGDLDVSVLDERPPGRQEIRTRRISRLEREKAYRHIRKQVAEGRQVYVICPLVEESEKLDLPSAEEMYEKLQHEVFPDLRVALLHGKMSAREKDGVMRAFRDHQYDILVSTAVIEVGIDVPNATTIVIEGAERFGLAQLHQFRGRVGRGSHQSYCILISDSDNQQSKERLAALEQTNDGFQLAEFDLQLRGPGEFFGTRQSGTPDLKMARQGDTRLLSEARRMAEAILSDDPALERPEHALLRRRVDAFWTEAMRAG
>NC_011831.1|WP_015942332.1|4440496_4441531_-|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta
MTQQTINAIGLTKADYRGAPSTLCAGCGHDSVASQIITAAFELSLQPHTVIRMSGIGCSSKSAAYFLGRSHGFNSLHGRMPSVTTGAHLANHTLRPLAVSGDGDTASIGLGQFIHLLRRNVPIVYIVENNGVYGLTKGQFSATADEGQELKHAGVNHLPPIDVCTEAILAGCGFVARSFAGDAKQVRELIKAAFNFHGAAVIDVISPCVTFNNHDRSTKSYTYGKTHESPLHDISFIPHYEEVTVDYEPGEVRDVQLHDGPVIRLRKLSHDHDPSNRMAALQLLEQARASGEFVTGLIYLNEQRPTLAETLSIGPTPIAALPEDRLRPTREAFAAVMADLTRER
>NC_011831.1|WP_015942333.1|4441621_4443439_-|2-oxoacid:acceptor-oxidoreductase-subunit-alpha
MQFSQSTVNEFAITAATINGSGSQTANMVLMRAIFLMGIPVSGKNLFPSNIQGEPTWYTLRVSQAGYTARPAQSQLLVAFNPRTANDDLANLVTGGICLYPADGPWQPQRSDIIPVALPVRQLLEQTGVSQRLRTYAANMVYVGALAALLGITDTALVKAVQHQFRGKATTVELNLAVIRAAKEWMSNTDTPAHGRFRVEPLAATTDLMLIDGNTAAAIGAITGGVGVVAWYPITPSTSLIESLESYLPRLRDHNQGATCAIVQAEDEIAALGIVIGAGWAGARAMTATSGPGISLMTEFAGLGFFAEIPAVIWDVQRVGPSTGLPTRTAQGDLLSVYYLGHGDTRHVVLLPGTMEECYSDAQQAFDLAEYLQTPVFVLSDLDLGMNIWMSRPFTYPEQPLQRGKVLSAEDLAKLTTYARFADVDGDGIGYRTLPGNPHPLAATLSRGTGHNERNVYSERPEDWQRNMARLWRKHETARRLVPRPVIDAHPEATIGLIGFGSTAPAIAEARDLLAATGIVTSSMRVRALPLGPEVTDFIARHRYCVVIEQNHDGQLRQLLQLHCPAYATRLGSVAWCDGLPLTAPFVRDQVLHVLEQMHVTTPIM
>NC_011831.1|WP_015942334.1|4443597_4444341_-|peptidylprolyl-isomerase
MSTQRPSSTPNPMTGLIAIAILLIILGLVAGLLISRAAPPTATPSPTTPPAPPTAAPVATPTPAASTMPIMPTATTYRYNSPPPMTIDPAKKYTATIYTPRGEIVIELLPDIAPQTVNNFVFLARQNFYNGLTWHRVLPNFMAQGGDPNGDGTGGPGYTIPAEFTDKILFDQPGIVAMARSTDPNSAGSQFFITTAPAPWLNEQYTIFGRVIKGQEIVDGIPLRDPNNPADLATPGETILGITISEE
>NC_011831.1|WP_015942335.1|4444421_4445321_-|UV-damage-repair-endonuclease
MIRLGFAVRTVQQPGLAGGAPLHLSVLLTQLGDLLSYLERRAIRFYRFAAPRHITPADLADCATQLALLSQRLSTQQIRLGLHLDPHLNLSHPDDRVAAETISTIEMATHLLVALDQPNTITHTLVIHAGAGDAEALLRLTRRWSALSAPARRRTTIEHNSSGPSLRLLLTLAARIGIPIVFDYLHFHLHNPDRWSLPLALGLSLATWPRDVRPEVHLSSQRSEAHLLPGRNGTTRVLPPRPGQHADFIVAQDALDLLAASRGLPPFDLMLEAKAGDLALLRLRHDLHRYAPEWEACVQ
>NC_011831.1|WP_015942336.1|4445438_4446683_-|tetratricopeptide-repeat-protein
MTDEMKRVASRRHLRYGLAFERTQRPLAALEQFRRAIAADPTMRDAHNALAFHYQQQGLLAKAADTFAAVATLADDYFAHFNLGFVLIELERYDEAEREFQRCLELDPNDTAAQLELAYIYAARGEYAKAVTMLEKPRQRYYDDWAVFHLLGRCLFQLQQFDEAQQAWQHALALAPHAEAQFDLLACLQSIERRREFHTCTGLKDDLYVHEGVICLGSAMDDGITIHPLHNYHLREHDIVRTIQRFVALARSSKWQLGGIVAPDLTSKPLAAALAQLLELPLLNLHHLPNITTPILLVIAVGHSADLFTIARERLPIPSPGFCLAVNWMKHSPLWPEVVGVVVEGVCTVPWADELRGLSSAEQMTVIQRIADRLAAQVQYVSGEENLPRQIRYYTRHHRRLAINSLLPTTKPRL
>NC_011831.1|WP_015942337.1|4446757_4447510_-|ribonuclease-PH
MVRRDGRAPDQLRPITIEIGAAPYAEGSALIAYGNTRVLCTATIEDGVPAWMRGQQGGWVTAEYAMLPRATLQRSRRERNGPSGRTQEIQRLIGRALRAAIDLHAIGERTITIDCDVLQADGGTRTASISGGYVALALAVDHLVRSGAVETYPTLTPLAAVSVGMIQDTLLLDLCYEEDSQADLDCNVVMNINSAFVEVQATAERTPVSRAQLDALLDLAARGIQQILATQAAALATVLPNNAMSSSASP
>NC_011831.1|WP_015942338.1|4447578_4448178_-|DNA-3-methyladenine-glycosylase-2-family-protein
MEQALNYLCTVDPVLAPWIDQIGSFALQRQPHSFATLAYAIISQQLSLNAARAIRDRLTTLLGELTPEQILAADTTALRAAGLSMQKSGYLRDLAERIVYGQINLELLPTLDDETAIAMLTNVRGIGRWTAEIYLMFALNRLDILPADDLGLRDGARLVYQLPQILSPRELRALGERWRPYRSIACWYLWQIRHIMSKS
>NC_011831.1|WP_041470744.1|4448189_4448468_+|hypothetical-protein
MIVHGDDGFAVSRQDTLQCSMTIVLDVNENGDRGDCFGIASLMPRPRELSVTHHRVVAPGKTDLTYSDWLVLVRDTIRVLGNDGVIGSYRLI
>NC_011831.1|WP_157044904.1|4448539_4448713_+|hypothetical-protein
MQRFGNGWLAGRIGHGWITMTQPESWLAGDEMAVHLAECTALAIETQGIISLVKPPG
>NC_011831.1|WP_015942340.1|4448825_4450001_+|zinc-dependent-metalloprotease
MVGNQNELRRFGAALLIGIAAGLAARYYFDSRARNESRVPTGLIDWEQARQAALRLSQWEQAPVDDRHFRRQQYAQMVAQSEPLIAEYLGVQLPEPVNRIFVFDRREWLEANIVSFSQLFRPLEEVYEKNGGGRGALGVMVNDVSSKLLGMQIGGLLGYLAQRVLGQYDLSLLSAEATGGSLYFVEPNIARVQQQLGLNDTDFRLWITLHEMTHAFEFEAYPWVRRYFRELIEQNFTLISGQMLGNGNNLIDIMMRLVQGVGSGQHWIESVLTPDQRVVFDRIQALMSIIEGYGNHVMNAVGRRLLPSFSQIEHQIAQRQRQRTLLDQMVFRLTGLDLKLAQYQQGEAFVNAVVAARGIRFAGRVWERPEHLPSMEEIRNPAMWIARIERM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_011831_4	4.2\|898253\|36\|NC_011831\|PILER-CR	898253-898288	36	NC_011831.1	898013-898048	0	1.0
NC_011831_4	4.2\|898253\|36\|NC_011831\|PILER-CR	898253-898288	36	NC_011831.1	899165-899200	0	1.0
NC_011831_4	4.2\|898253\|36\|NC_011831\|PILER-CR	898253-898288	36	NC_011831.1	899285-899320	0	1.0
NC_011831_4	4.2\|898253\|36\|NC_011831\|PILER-CR	898253-898288	36	NC_011831.1	899603-899638	0	1.0
NC_011831_4	4.2\|898253\|36\|NC_011831\|PILER-CR	898253-898288	36	NC_011831.1	899822-899857	0	1.0
NC_011831_4	4.2\|898253\|36\|NC_011831\|PILER-CR	898253-898288	36	NC_011831.1	899942-899977	0	1.0
NC_011831_4	4.2\|898253\|36\|NC_011831\|PILER-CR	898253-898288	36	NC_011831.1	900062-900097	0	1.0
NC_011831_4	4.2\|898253\|36\|NC_011831\|PILER-CR	898253-898288	36	NC_011831.1	900182-900217	0	1.0
NC_011831_4	4.3\|898318\|47\|NC_011831\|PILER-CR	898318-898364	47	NC_011831.1	899428-899474	0	1.0
NC_011831_14	14.1\|2004472\|56\|NC_011831\|PILER-CR	2004472-2004527	56	NC_011831.1	2003667-2003722	0	1.0
NC_011831_14	14.1\|2004472\|56\|NC_011831\|PILER-CR	2004472-2004527	56	NC_011831.1	2004077-2004132	0	1.0
NC_011831_14	14.1\|2004472\|56\|NC_011831\|PILER-CR	2004472-2004527	56	NC_011831.1	2004284-2004339	0	1.0
NC_011831_18	18.1\|2372147\|53\|NC_011831\|CRISPRCasFinder	2372147-2372199	53	NC_011831.1	2372049-2372101	0	1.0
NC_011831_18	18.1\|2372147\|53\|NC_011831\|CRISPRCasFinder	2372147-2372199	53	NC_011831.1	2372254-2372306	0	1.0
NC_011831_20	20.2\|2770781\|18\|NC_011831\|CRT	2770781-2770798	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_20	20.5\|2770914\|18\|NC_011831\|CRT	2770914-2770931	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_20	20.7\|2771000\|18\|NC_011831\|CRT	2771000-2771017	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_20	20.9\|2771078\|18\|NC_011831\|CRT	2771078-2771095	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_20	20.13\|2771258\|18\|NC_011831\|CRT	2771258-2771275	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_20	20.14\|2771297\|18\|NC_011831\|CRT	2771297-2771314	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_20	20.15\|2771336\|18\|NC_011831\|CRT	2771336-2771353	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_20	20.16\|2771375\|18\|NC_011831\|CRT	2771375-2771392	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_20	20.17\|2771414\|18\|NC_011831\|CRT	2771414-2771431	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_20	20.19\|2771492\|18\|NC_011831\|CRT	2771492-2771509	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_20	20.23\|2771672\|18\|NC_011831\|CRT	2771672-2771689	18	NC_011831.1	2770703-2770720	0	1.0
NC_011831_35	35.4\|4153074\|33\|NC_011831\|CRT	4153074-4153106	33	NC_011831.1	4152776-4152808	0	1.0
NC_011831_35	35.4\|4153074\|33\|NC_011831\|CRT	4153074-4153106	33	NC_011831.1	4152790-4152822	0	1.0
NC_011831_35	35.7\|4153238\|18\|NC_011831\|CRT	4153238-4153255	18	NC_011831.1	4152776-4152793	0	1.0
NC_011831_35	35.7\|4153238\|18\|NC_011831\|CRT	4153238-4153255	18	NC_011831.1	4152790-4152807	0	1.0
NC_011831_35	35.7\|4153238\|18\|NC_011831\|CRT	4153238-4153255	18	NC_011831.1	4152804-4152821	0	1.0
NC_011831_35	35.11\|4153469\|30\|NC_011831\|CRT	4153469-4153498	30	NC_011831.1	4153633-4153662	0	1.0
NC_011831_35	35.12\|4153523\|33\|NC_011831\|CRT	4153523-4153555	33	NC_011831.1	4152776-4152808	0	1.0
NC_011831_35	35.12\|4153523\|33\|NC_011831\|CRT	4153523-4153555	33	NC_011831.1	4152790-4152822	0	1.0
NC_011831_39	39.1\|4434017\|27\|NC_011831\|CRT	4434017-4434043	27	NC_011831.1	4434578-4434604	0	1.0
NC_011831_39	39.1\|4434017\|27\|NC_011831\|CRT	4434017-4434043	27	NC_011831.1	4434665-4434691	0	1.0
NC_011831_39	39.1\|4434017\|27\|NC_011831\|CRT	4434017-4434043	27	NC_011831.1	4434809-4434835	0	1.0
NC_011831_39	39.1\|4434017\|27\|NC_011831\|CRT	4434017-4434043	27	NC_011831.1	4435205-4435231	0	1.0
NC_011831_39	39.1\|4434017\|27\|NC_011831\|CRT	4434017-4434043	27	NC_011831.1	4435733-4435759	0	1.0
NC_011831_39	39.1\|4434017\|27\|NC_011831\|CRT	4434017-4434043	27	NC_011831.1	4436309-4436335	0	1.0
NC_011831_39	39.3\|4434113\|18\|NC_011831\|CRT	4434113-4434130	18	NC_011831.1	4433978-4433995	0	1.0
NC_011831_39	39.3\|4434113\|18\|NC_011831\|CRT	4434113-4434130	18	NC_011831.1	4434539-4434556	0	1.0
NC_011831_39	39.3\|4434113\|18\|NC_011831\|CRT	4434113-4434130	18	NC_011831.1	4434626-4434643	0	1.0
NC_011831_39	39.3\|4434113\|18\|NC_011831\|CRT	4434113-4434130	18	NC_011831.1	4435166-4435183	0	1.0
NC_011831_39	39.4\|4434152\|27\|NC_011831\|CRT	4434152-4434178	27	NC_011831.1	4434578-4434604	0	1.0
NC_011831_39	39.4\|4434152\|27\|NC_011831\|CRT	4434152-4434178	27	NC_011831.1	4434665-4434691	0	1.0
NC_011831_39	39.4\|4434152\|27\|NC_011831\|CRT	4434152-4434178	27	NC_011831.1	4434809-4434835	0	1.0
NC_011831_39	39.4\|4434152\|27\|NC_011831\|CRT	4434152-4434178	27	NC_011831.1	4435205-4435231	0	1.0
NC_011831_39	39.4\|4434152\|27\|NC_011831\|CRT	4434152-4434178	27	NC_011831.1	4435733-4435759	0	1.0
NC_011831_39	39.4\|4434152\|27\|NC_011831\|CRT	4434152-4434178	27	NC_011831.1	4436309-4436335	0	1.0
NC_011831_39	39.5\|4434200\|18\|NC_011831\|CRT	4434200-4434217	18	NC_011831.1	4433978-4433995	0	1.0
NC_011831_39	39.5\|4434200\|18\|NC_011831\|CRT	4434200-4434217	18	NC_011831.1	4434539-4434556	0	1.0
NC_011831_39	39.5\|4434200\|18\|NC_011831\|CRT	4434200-4434217	18	NC_011831.1	4434626-4434643	0	1.0
NC_011831_39	39.5\|4434200\|18\|NC_011831\|CRT	4434200-4434217	18	NC_011831.1	4435166-4435183	0	1.0
NC_011831_39	39.7\|4434287\|18\|NC_011831\|CRT	4434287-4434304	18	NC_011831.1	4433978-4433995	0	1.0
NC_011831_39	39.7\|4434287\|18\|NC_011831\|CRT	4434287-4434304	18	NC_011831.1	4434539-4434556	0	1.0
NC_011831_39	39.7\|4434287\|18\|NC_011831\|CRT	4434287-4434304	18	NC_011831.1	4434626-4434643	0	1.0
NC_011831_39	39.7\|4434287\|18\|NC_011831\|CRT	4434287-4434304	18	NC_011831.1	4435166-4435183	0	1.0
NC_011831_39	39.8\|4434326\|27\|NC_011831\|CRT	4434326-4434352	27	NC_011831.1	4434578-4434604	0	1.0
NC_011831_39	39.8\|4434326\|27\|NC_011831\|CRT	4434326-4434352	27	NC_011831.1	4434665-4434691	0	1.0
NC_011831_39	39.8\|4434326\|27\|NC_011831\|CRT	4434326-4434352	27	NC_011831.1	4434809-4434835	0	1.0
NC_011831_39	39.8\|4434326\|27\|NC_011831\|CRT	4434326-4434352	27	NC_011831.1	4435205-4435231	0	1.0
NC_011831_39	39.8\|4434326\|27\|NC_011831\|CRT	4434326-4434352	27	NC_011831.1	4435733-4435759	0	1.0
NC_011831_39	39.8\|4434326\|27\|NC_011831\|CRT	4434326-4434352	27	NC_011831.1	4436309-4436335	0	1.0
NC_011831_39	39.9\|4434374\|18\|NC_011831\|CRT	4434374-4434391	18	NC_011831.1	4433978-4433995	0	1.0
NC_011831_39	39.9\|4434374\|18\|NC_011831\|CRT	4434374-4434391	18	NC_011831.1	4434539-4434556	0	1.0
NC_011831_39	39.9\|4434374\|18\|NC_011831\|CRT	4434374-4434391	18	NC_011831.1	4434626-4434643	0	1.0
NC_011831_39	39.9\|4434374\|18\|NC_011831\|CRT	4434374-4434391	18	NC_011831.1	4435166-4435183	0	1.0
NC_011831_4	4.3\|898318\|47\|NC_011831\|PILER-CR	898318-898364	47	NC_011831.1	899746-899792	1	0.979
NC_011831_14	14.1\|2004472\|56\|NC_011831\|PILER-CR	2004472-2004527	56	NC_011831.1	2003461-2003516	1	0.982
NC_011831_14	14.1\|2004472\|56\|NC_011831\|PILER-CR	2004472-2004527	56	NC_011831.1	2004660-2004715	1	0.982
NC_011831_14	14.2\|2004584\|47\|NC_011831\|PILER-CR	2004584-2004630	47	NC_011831.1	2004369-2004415	1	0.979
NC_011831_20	20.1\|2770742\|18\|NC_011831\|CRT	2770742-2770759	18	NC_011831.1	2770703-2770720	1	0.944
NC_011831_20	20.8\|2771039\|18\|NC_011831\|CRT	2771039-2771056	18	NC_011831.1	2770703-2770720	1	0.944
NC_011831_20	20.18\|2771453\|18\|NC_011831\|CRT	2771453-2771470	18	NC_011831.1	2770703-2770720	1	0.944
NC_011831_22	22.1\|3037783\|35\|NC_011831\|CRISPRCasFinder	3037783-3037817	35	NC_011831.1	685489-685523	1	0.971
NC_011831_35	35.4\|4153074\|33\|NC_011831\|CRT	4153074-4153106	33	NC_011831.1	4152762-4152794	1	0.97
NC_011831_35	35.7\|4153238\|18\|NC_011831\|CRT	4153238-4153255	18	NC_011831.1	4152762-4152779	1	0.944
NC_011831_35	35.12\|4153523\|33\|NC_011831\|CRT	4153523-4153555	33	NC_011831.1	4152762-4152794	1	0.97
NC_011831_39	39.1\|4434017\|27\|NC_011831\|CRT	4434017-4434043	27	NC_011831.1	4434896-4434922	1	0.963
NC_011831_39	39.1\|4434017\|27\|NC_011831\|CRT	4434017-4434043	27	NC_011831.1	4434944-4434970	1	0.963
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4434761-4434787	1	0.963
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4434992-4435018	1	0.963
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435685-4435711	1	0.963
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435877-4435903	1	0.963
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4436069-4436095	1	0.963
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4436117-4436143	1	0.963
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4436261-4436287	1	0.963
NC_011831_39	39.4\|4434152\|27\|NC_011831\|CRT	4434152-4434178	27	NC_011831.1	4434896-4434922	1	0.963
NC_011831_39	39.4\|4434152\|27\|NC_011831\|CRT	4434152-4434178	27	NC_011831.1	4434944-4434970	1	0.963
NC_011831_39	39.6\|4434239\|27\|NC_011831\|CRT	4434239-4434265	27	NC_011831.1	4434578-4434604	1	0.963
NC_011831_39	39.6\|4434239\|27\|NC_011831\|CRT	4434239-4434265	27	NC_011831.1	4434665-4434691	1	0.963
NC_011831_39	39.6\|4434239\|27\|NC_011831\|CRT	4434239-4434265	27	NC_011831.1	4434809-4434835	1	0.963
NC_011831_39	39.6\|4434239\|27\|NC_011831\|CRT	4434239-4434265	27	NC_011831.1	4435205-4435231	1	0.963
NC_011831_39	39.6\|4434239\|27\|NC_011831\|CRT	4434239-4434265	27	NC_011831.1	4435733-4435759	1	0.963
NC_011831_39	39.6\|4434239\|27\|NC_011831\|CRT	4434239-4434265	27	NC_011831.1	4436309-4436335	1	0.963
NC_011831_39	39.8\|4434326\|27\|NC_011831\|CRT	4434326-4434352	27	NC_011831.1	4434896-4434922	1	0.963
NC_011831_39	39.8\|4434326\|27\|NC_011831\|CRT	4434326-4434352	27	NC_011831.1	4434944-4434970	1	0.963
NC_011831_4	4.3\|898318\|47\|NC_011831\|PILER-CR	898318-898364	47	NC_011831.1	899866-899912	2	0.957
NC_011831_35	35.2\|4152925\|57\|NC_011831\|CRT	4152925-4152981	57	NC_011831.1	4152804-4152860	2	0.965
NC_011831_35	35.6\|4153184\|30\|NC_011831\|CRT	4153184-4153213	30	NC_011831.1	4153633-4153662	2	0.933
NC_011831_35	35.9\|4153347\|31\|NC_011831\|CRT	4153347-4153377	31	NC_011831.1	4153633-4153663	2	0.935
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4434713-4434739	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435301-4435327	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435397-4435423	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435445-4435471	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435493-4435519	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435589-4435615	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435637-4435663	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435781-4435807	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435829-4435855	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435925-4435951	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4435973-4435999	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4436021-4436047	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4436165-4436191	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4436357-4436383	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4436405-4436431	2	0.926
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_011831.1	4436453-4436479	2	0.926
NC_011831_39	39.6\|4434239\|27\|NC_011831\|CRT	4434239-4434265	27	NC_011831.1	4434896-4434922	2	0.926
NC_011831_39	39.6\|4434239\|27\|NC_011831\|CRT	4434239-4434265	27	NC_011831.1	4434944-4434970	2	0.926
NC_011831_35	35.1\|4152832\|69\|NC_011831\|CRT	4152832-4152900	69	NC_011831.1	4153580-4153648	9	0.87

1. spacer 4.2|898253|36|NC_011831|PILER-CR matches to position: 898013-898048, mismatch: 0, identity: 1.0

cgcacaggcagccgaagatacctttaccgccgcccg	CRISPR spacer
cgcacaggcagccgaagatacctttaccgccgcccg	Protospacer
************************************

2. spacer 4.2|898253|36|NC_011831|PILER-CR matches to position: 899165-899200, mismatch: 0, identity: 1.0

cgcacaggcagccgaagatacctttaccgccgcccg	CRISPR spacer
cgcacaggcagccgaagatacctttaccgccgcccg	Protospacer
************************************

3. spacer 4.2|898253|36|NC_011831|PILER-CR matches to position: 899285-899320, mismatch: 0, identity: 1.0

cgcacaggcagccgaagatacctttaccgccgcccg	CRISPR spacer
cgcacaggcagccgaagatacctttaccgccgcccg	Protospacer
************************************

4. spacer 4.2|898253|36|NC_011831|PILER-CR matches to position: 899603-899638, mismatch: 0, identity: 1.0

cgcacaggcagccgaagatacctttaccgccgcccg	CRISPR spacer
cgcacaggcagccgaagatacctttaccgccgcccg	Protospacer
************************************

5. spacer 4.2|898253|36|NC_011831|PILER-CR matches to position: 899822-899857, mismatch: 0, identity: 1.0

cgcacaggcagccgaagatacctttaccgccgcccg	CRISPR spacer
cgcacaggcagccgaagatacctttaccgccgcccg	Protospacer
************************************

6. spacer 4.2|898253|36|NC_011831|PILER-CR matches to position: 899942-899977, mismatch: 0, identity: 1.0

cgcacaggcagccgaagatacctttaccgccgcccg	CRISPR spacer
cgcacaggcagccgaagatacctttaccgccgcccg	Protospacer
************************************

7. spacer 4.2|898253|36|NC_011831|PILER-CR matches to position: 900062-900097, mismatch: 0, identity: 1.0

cgcacaggcagccgaagatacctttaccgccgcccg	CRISPR spacer
cgcacaggcagccgaagatacctttaccgccgcccg	Protospacer
************************************

8. spacer 4.2|898253|36|NC_011831|PILER-CR matches to position: 900182-900217, mismatch: 0, identity: 1.0

cgcacaggcagccgaagatacctttaccgccgcccg	CRISPR spacer
cgcacaggcagccgaagatacctttaccgccgcccg	Protospacer
************************************

9. spacer 4.3|898318|47|NC_011831|PILER-CR matches to position: 899428-899474, mismatch: 0, identity: 1.0

ccgacgcgattgctgacaaccgtacccgcgcatgggcgctgaccaat	CRISPR spacer
ccgacgcgattgctgacaaccgtacccgcgcatgggcgctgaccaat	Protospacer
***********************************************

10. spacer 14.1|2004472|56|NC_011831|PILER-CR matches to position: 2003667-2003722, mismatch: 0, identity: 1.0

cacgatggcgctggcccgcccgtgaaatgaccggaggggttagggcaagcgtagtc	CRISPR spacer
cacgatggcgctggcccgcccgtgaaatgaccggaggggttagggcaagcgtagtc	Protospacer
********************************************************

11. spacer 14.1|2004472|56|NC_011831|PILER-CR matches to position: 2004077-2004132, mismatch: 0, identity: 1.0

cacgatggcgctggcccgcccgtgaaatgaccggaggggttagggcaagcgtagtc	CRISPR spacer
cacgatggcgctggcccgcccgtgaaatgaccggaggggttagggcaagcgtagtc	Protospacer
********************************************************

12. spacer 14.1|2004472|56|NC_011831|PILER-CR matches to position: 2004284-2004339, mismatch: 0, identity: 1.0

cacgatggcgctggcccgcccgtgaaatgaccggaggggttagggcaagcgtagtc	CRISPR spacer
cacgatggcgctggcccgcccgtgaaatgaccggaggggttagggcaagcgtagtc	Protospacer
********************************************************

13. spacer 18.1|2372147|53|NC_011831|CRISPRCasFinder matches to position: 2372049-2372101, mismatch: 0, identity: 1.0

acgccacccgtaggggcacggcgatgccgtgcccccccacgccaagaccgtaa	CRISPR spacer
acgccacccgtaggggcacggcgatgccgtgcccccccacgccaagaccgtaa	Protospacer
*****************************************************

14. spacer 18.1|2372147|53|NC_011831|CRISPRCasFinder matches to position: 2372254-2372306, mismatch: 0, identity: 1.0

acgccacccgtaggggcacggcgatgccgtgcccccccacgccaagaccgtaa	CRISPR spacer
acgccacccgtaggggcacggcgatgccgtgcccccccacgccaagaccgtaa	Protospacer
*****************************************************

15. spacer 20.2|2770781|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

16. spacer 20.5|2770914|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

17. spacer 20.7|2771000|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

18. spacer 20.9|2771078|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

19. spacer 20.13|2771258|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

20. spacer 20.14|2771297|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

21. spacer 20.15|2771336|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

22. spacer 20.16|2771375|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

23. spacer 20.17|2771414|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

24. spacer 20.19|2771492|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

25. spacer 20.23|2771672|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 0, identity: 1.0

cggtcatctgaccaccgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
******************

26. spacer 35.4|4153074|33|NC_011831|CRT matches to position: 4152776-4152808, mismatch: 0, identity: 1.0

gagccgcacagccggagccgcacagccggagcc	CRISPR spacer
gagccgcacagccggagccgcacagccggagcc	Protospacer
*********************************

27. spacer 35.4|4153074|33|NC_011831|CRT matches to position: 4152790-4152822, mismatch: 0, identity: 1.0

gagccgcacagccggagccgcacagccggagcc	CRISPR spacer
gagccgcacagccggagccgcacagccggagcc	Protospacer
*********************************

28. spacer 35.7|4153238|18|NC_011831|CRT matches to position: 4152776-4152793, mismatch: 0, identity: 1.0

gagccgcacagccggagc	CRISPR spacer
gagccgcacagccggagc	Protospacer
******************

29. spacer 35.7|4153238|18|NC_011831|CRT matches to position: 4152790-4152807, mismatch: 0, identity: 1.0

gagccgcacagccggagc	CRISPR spacer
gagccgcacagccggagc	Protospacer
******************

30. spacer 35.7|4153238|18|NC_011831|CRT matches to position: 4152804-4152821, mismatch: 0, identity: 1.0

gagccgcacagccggagc	CRISPR spacer
gagccgcacagccggagc	Protospacer
******************

31. spacer 35.11|4153469|30|NC_011831|CRT matches to position: 4153633-4153662, mismatch: 0, identity: 1.0

tgcggctagaggagcccgccctgccggagc	CRISPR spacer
tgcggctagaggagcccgccctgccggagc	Protospacer
******************************

32. spacer 35.12|4153523|33|NC_011831|CRT matches to position: 4152776-4152808, mismatch: 0, identity: 1.0

gagccgcacagccggagccgcacagccggagcc	CRISPR spacer
gagccgcacagccggagccgcacagccggagcc	Protospacer
*********************************

33. spacer 35.12|4153523|33|NC_011831|CRT matches to position: 4152790-4152822, mismatch: 0, identity: 1.0

gagccgcacagccggagccgcacagccggagcc	CRISPR spacer
gagccgcacagccggagccgcacagccggagcc	Protospacer
*********************************

34. spacer 39.1|4434017|27|NC_011831|CRT matches to position: 4434578-4434604, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

35. spacer 39.1|4434017|27|NC_011831|CRT matches to position: 4434665-4434691, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

36. spacer 39.1|4434017|27|NC_011831|CRT matches to position: 4434809-4434835, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

37. spacer 39.1|4434017|27|NC_011831|CRT matches to position: 4435205-4435231, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

38. spacer 39.1|4434017|27|NC_011831|CRT matches to position: 4435733-4435759, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

39. spacer 39.1|4434017|27|NC_011831|CRT matches to position: 4436309-4436335, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

40. spacer 39.3|4434113|18|NC_011831|CRT matches to position: 4433978-4433995, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

41. spacer 39.3|4434113|18|NC_011831|CRT matches to position: 4434539-4434556, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

42. spacer 39.3|4434113|18|NC_011831|CRT matches to position: 4434626-4434643, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

43. spacer 39.3|4434113|18|NC_011831|CRT matches to position: 4435166-4435183, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

44. spacer 39.4|4434152|27|NC_011831|CRT matches to position: 4434578-4434604, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

45. spacer 39.4|4434152|27|NC_011831|CRT matches to position: 4434665-4434691, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

46. spacer 39.4|4434152|27|NC_011831|CRT matches to position: 4434809-4434835, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

47. spacer 39.4|4434152|27|NC_011831|CRT matches to position: 4435205-4435231, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

48. spacer 39.4|4434152|27|NC_011831|CRT matches to position: 4435733-4435759, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

49. spacer 39.4|4434152|27|NC_011831|CRT matches to position: 4436309-4436335, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

50. spacer 39.5|4434200|18|NC_011831|CRT matches to position: 4433978-4433995, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

51. spacer 39.5|4434200|18|NC_011831|CRT matches to position: 4434539-4434556, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

52. spacer 39.5|4434200|18|NC_011831|CRT matches to position: 4434626-4434643, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

53. spacer 39.5|4434200|18|NC_011831|CRT matches to position: 4435166-4435183, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

54. spacer 39.7|4434287|18|NC_011831|CRT matches to position: 4433978-4433995, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

55. spacer 39.7|4434287|18|NC_011831|CRT matches to position: 4434539-4434556, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

56. spacer 39.7|4434287|18|NC_011831|CRT matches to position: 4434626-4434643, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

57. spacer 39.7|4434287|18|NC_011831|CRT matches to position: 4435166-4435183, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

58. spacer 39.8|4434326|27|NC_011831|CRT matches to position: 4434578-4434604, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

59. spacer 39.8|4434326|27|NC_011831|CRT matches to position: 4434665-4434691, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

60. spacer 39.8|4434326|27|NC_011831|CRT matches to position: 4434809-4434835, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

61. spacer 39.8|4434326|27|NC_011831|CRT matches to position: 4435205-4435231, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

62. spacer 39.8|4434326|27|NC_011831|CRT matches to position: 4435733-4435759, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

63. spacer 39.8|4434326|27|NC_011831|CRT matches to position: 4436309-4436335, mismatch: 0, identity: 1.0

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***************************

64. spacer 39.9|4434374|18|NC_011831|CRT matches to position: 4433978-4433995, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

65. spacer 39.9|4434374|18|NC_011831|CRT matches to position: 4434539-4434556, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

66. spacer 39.9|4434374|18|NC_011831|CRT matches to position: 4434626-4434643, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

67. spacer 39.9|4434374|18|NC_011831|CRT matches to position: 4435166-4435183, mismatch: 0, identity: 1.0

tgacgctgccccggcctg	CRISPR spacer
tgacgctgccccggcctg	Protospacer
******************

68. spacer 4.3|898318|47|NC_011831|PILER-CR matches to position: 899746-899792, mismatch: 1, identity: 0.979

ccgacgcgattgctgacaaccgtacccgcgcatgggcgctgaccaat	CRISPR spacer
ccgacgcgattgctgacaaccgtgcccgcgcatgggcgctgaccaat	Protospacer
***********************.***********************

69. spacer 14.1|2004472|56|NC_011831|PILER-CR matches to position: 2003461-2003516, mismatch: 1, identity: 0.982

cacgatggcgctggcccgcccgtgaaatgaccggaggggttagggcaagcgtagtc	CRISPR spacer
cacgatggcgctggcccgcctgtgaaatgaccggaggggttagggcaagcgtagtc	Protospacer
********************.***********************************

70. spacer 14.1|2004472|56|NC_011831|PILER-CR matches to position: 2004660-2004715, mismatch: 1, identity: 0.982

cacgatggcgctggcccgcccgtgaaatgaccggaggggttagggcaagcgtagtc	CRISPR spacer
cacgatggcgctggcccgcctgtgaaatgaccggaggggttagggcaagcgtagtc	Protospacer
********************.***********************************

71. spacer 14.2|2004584|47|NC_011831|PILER-CR matches to position: 2004369-2004415, mismatch: 1, identity: 0.979

tcttcgtcaagattgctcgggcgctgacgcgccctcgcaatgacaaa	CRISPR spacer
tcttcgtcaagattgcttgggcgctgacgcgccctcgcaatgacaaa	Protospacer
*****************.*****************************

72. spacer 20.1|2770742|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 1, identity: 0.944

cggtcatctgaccactgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
***************.**

73. spacer 20.8|2771039|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 1, identity: 0.944

cggtcatctgaccactgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
***************.**

74. spacer 20.18|2771453|18|NC_011831|CRT matches to position: 2770703-2770720, mismatch: 1, identity: 0.944

cggtcatctgaccactgc	CRISPR spacer
cggtcatctgaccaccgc	Protospacer
***************.**

75. spacer 22.1|3037783|35|NC_011831|CRISPRCasFinder matches to position: 685489-685523, mismatch: 1, identity: 0.971

tcgattggatcgatcacccacacatcttcacgctc	CRISPR spacer
tcgattggatcgatcacccacacatattcacgctc	Protospacer
************************* *********

76. spacer 35.4|4153074|33|NC_011831|CRT matches to position: 4152762-4152794, mismatch: 1, identity: 0.97

gagccgcacagccggagccgcacagccggagcc	CRISPR spacer
gagtcgcacagccggagccgcacagccggagcc	Protospacer
***.*****************************

77. spacer 35.7|4153238|18|NC_011831|CRT matches to position: 4152762-4152779, mismatch: 1, identity: 0.944

gagccgcacagccggagc	CRISPR spacer
gagtcgcacagccggagc	Protospacer
***.**************

78. spacer 35.12|4153523|33|NC_011831|CRT matches to position: 4152762-4152794, mismatch: 1, identity: 0.97

gagccgcacagccggagccgcacagccggagcc	CRISPR spacer
gagtcgcacagccggagccgcacagccggagcc	Protospacer
***.*****************************

79. spacer 39.1|4434017|27|NC_011831|CRT matches to position: 4434896-4434922, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtgccggcgtg	Protospacer
******************.********

80. spacer 39.1|4434017|27|NC_011831|CRT matches to position: 4434944-4434970, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtgccggcgtg	Protospacer
******************.********

81. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4434761-4434787, mismatch: 1, identity: 0.963

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgccggcgtg	Protospacer
***********************.***

82. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4434992-4435018, mismatch: 1, identity: 0.963

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgccggcgtg	Protospacer
***********************.***

83. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435685-4435711, mismatch: 1, identity: 0.963

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgccggcgtg	Protospacer
***********************.***

84. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435877-4435903, mismatch: 1, identity: 0.963

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgccggcgtg	Protospacer
***********************.***

85. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4436069-4436095, mismatch: 1, identity: 0.963

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgccggcgtg	Protospacer
***********************.***

86. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4436117-4436143, mismatch: 1, identity: 0.963

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgccggcgtg	Protospacer
***********************.***

87. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4436261-4436287, mismatch: 1, identity: 0.963

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgccggcgtg	Protospacer
***********************.***

88. spacer 39.4|4434152|27|NC_011831|CRT matches to position: 4434896-4434922, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtgccggcgtg	Protospacer
******************.********

89. spacer 39.4|4434152|27|NC_011831|CRT matches to position: 4434944-4434970, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtgccggcgtg	Protospacer
******************.********

90. spacer 39.6|4434239|27|NC_011831|CRT matches to position: 4434578-4434604, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggtgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***********************.***

91. spacer 39.6|4434239|27|NC_011831|CRT matches to position: 4434665-4434691, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggtgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***********************.***

92. spacer 39.6|4434239|27|NC_011831|CRT matches to position: 4434809-4434835, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggtgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***********************.***

93. spacer 39.6|4434239|27|NC_011831|CRT matches to position: 4435205-4435231, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggtgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***********************.***

94. spacer 39.6|4434239|27|NC_011831|CRT matches to position: 4435733-4435759, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggtgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***********************.***

95. spacer 39.6|4434239|27|NC_011831|CRT matches to position: 4436309-4436335, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggtgtg	CRISPR spacer
cgcaccgaccagcgacgtaccggcgtg	Protospacer
***********************.***

96. spacer 39.8|4434326|27|NC_011831|CRT matches to position: 4434896-4434922, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtgccggcgtg	Protospacer
******************.********

97. spacer 39.8|4434326|27|NC_011831|CRT matches to position: 4434944-4434970, mismatch: 1, identity: 0.963

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
cgcaccgaccagcgacgtgccggcgtg	Protospacer
******************.********

98. spacer 4.3|898318|47|NC_011831|PILER-CR matches to position: 899866-899912, mismatch: 2, identity: 0.957

ccgacgcgattgctgacaaccgtacccgcgcatgggcgctgaccaat	CRISPR spacer
ccgacgcgattgctgacaaccgtgcccgcgcaagggcgctgaccaat	Protospacer
***********************.******** **************

99. spacer 35.2|4152925|57|NC_011831|CRT matches to position: 4152804-4152860, mismatch: 2, identity: 0.965

gagccgcacggccggagccgcacagccgtgcggctgtacggggcatgggtgcgggag	CRISPR spacer
gagccgcacagccggagccgcactgccgtgcggctgtacggggcatgggtgcgggag	Protospacer
*********.************* *********************************

100. spacer 35.6|4153184|30|NC_011831|CRT matches to position: 4153633-4153662, mismatch: 2, identity: 0.933

tgcggctagaggagcccgcacagccggagc	CRISPR spacer
tgcggctagaggagcccgccctgccggagc	Protospacer
******************* * ********

101. spacer 35.9|4153347|31|NC_011831|CRT matches to position: 4153633-4153663, mismatch: 2, identity: 0.935

tgcggctagaggagcccgcacagccggagcc	CRISPR spacer
tgcggctagaggagcccgccctgccggagcc	Protospacer
******************* * *********

102. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4434713-4434739, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

103. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435301-4435327, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

104. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435397-4435423, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

105. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435445-4435471, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

106. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435493-4435519, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

107. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435589-4435615, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

108. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435637-4435663, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

109. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435781-4435807, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

110. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435829-4435855, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

111. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435925-4435951, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

112. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4435973-4435999, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

113. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4436021-4436047, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

114. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4436165-4436191, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

115. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4436357-4436383, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

116. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4436405-4436431, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

117. spacer 39.2|4434065|27|NC_011831|CRT matches to position: 4436453-4436479, mismatch: 2, identity: 0.926

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtaccggcgtg	Protospacer
******************.****.***

118. spacer 39.6|4434239|27|NC_011831|CRT matches to position: 4434896-4434922, mismatch: 2, identity: 0.926

cgcaccgaccagcgacgtaccggtgtg	CRISPR spacer
cgcaccgaccagcgacgtgccggcgtg	Protospacer
******************.****.***

119. spacer 39.6|4434239|27|NC_011831|CRT matches to position: 4434944-4434970, mismatch: 2, identity: 0.926

cgcaccgaccagcgacgtaccggtgtg	CRISPR spacer
cgcaccgaccagcgacgtgccggcgtg	Protospacer
******************.****.***

120. spacer 35.1|4152832|69|NC_011831|CRT matches to position: 4153580-4153648, mismatch: 9, identity: 0.87

tgcggctgtacggggcatgggtgcgggagccgctagctagagccgcacggccgtgcggct	CRISPR spacer
tgcggctgtacggggcatgggtgcgggagccgctagctagagccgcacggccgtgcggct	Protospacer
************************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_011831_8	8.14\|1281211\|22\|NC_011831\|CRT	1281211-1281232	22	NC_007950	Polaromonas sp. JS666 plasmid 2, complete sequence	991-1012	2	0.909
NC_011831_20	20.3\|2770820\|26\|NC_011831\|CRT	2770820-2770845	26	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	463383-463408	3	0.885
NC_011831_20	20.3\|2770820\|26\|NC_011831\|CRT	2770820-2770845	26	NZ_CP054609	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence	56255-56280	3	0.885
NC_011831_20	20.3\|2770820\|26\|NC_011831\|CRT	2770820-2770845	26	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1972103-1972128	3	0.885
NC_011831_20	20.3\|2770820\|26\|NC_011831\|CRT	2770820-2770845	26	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	2036365-2036390	3	0.885
NC_011831_20	20.6\|2770953\|26\|NC_011831\|CRT	2770953-2770978	26	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	463383-463408	3	0.885
NC_011831_20	20.6\|2770953\|26\|NC_011831\|CRT	2770953-2770978	26	NZ_CP054609	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence	56255-56280	3	0.885
NC_011831_20	20.6\|2770953\|26\|NC_011831\|CRT	2770953-2770978	26	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1972103-1972128	3	0.885
NC_011831_20	20.6\|2770953\|26\|NC_011831\|CRT	2770953-2770978	26	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	2036365-2036390	3	0.885
NC_011831_20	20.10\|2771117\|26\|NC_011831\|CRT	2771117-2771142	26	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	463383-463408	3	0.885
NC_011831_20	20.10\|2771117\|26\|NC_011831\|CRT	2771117-2771142	26	NZ_CP054609	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence	56255-56280	3	0.885
NC_011831_20	20.10\|2771117\|26\|NC_011831\|CRT	2771117-2771142	26	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1972103-1972128	3	0.885
NC_011831_20	20.10\|2771117\|26\|NC_011831\|CRT	2771117-2771142	26	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	2036365-2036390	3	0.885
NC_011831_20	20.20\|2771531\|26\|NC_011831\|CRT	2771531-2771556	26	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	463383-463408	3	0.885
NC_011831_20	20.20\|2771531\|26\|NC_011831\|CRT	2771531-2771556	26	NZ_CP054609	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence	56255-56280	3	0.885
NC_011831_20	20.20\|2771531\|26\|NC_011831\|CRT	2771531-2771556	26	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1972103-1972128	3	0.885
NC_011831_20	20.20\|2771531\|26\|NC_011831\|CRT	2771531-2771556	26	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	2036365-2036390	3	0.885
NC_011831_20	20.21\|2771578\|26\|NC_011831\|CRT	2771578-2771603	26	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	463383-463408	3	0.885
NC_011831_20	20.21\|2771578\|26\|NC_011831\|CRT	2771578-2771603	26	NZ_CP054609	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence	56255-56280	3	0.885
NC_011831_20	20.21\|2771578\|26\|NC_011831\|CRT	2771578-2771603	26	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1972103-1972128	3	0.885
NC_011831_20	20.21\|2771578\|26\|NC_011831\|CRT	2771578-2771603	26	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	2036365-2036390	3	0.885
NC_011831_20	20.22\|2771625\|26\|NC_011831\|CRT	2771625-2771650	26	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	463383-463408	3	0.885
NC_011831_20	20.22\|2771625\|26\|NC_011831\|CRT	2771625-2771650	26	NZ_CP054609	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence	56255-56280	3	0.885
NC_011831_20	20.22\|2771625\|26\|NC_011831\|CRT	2771625-2771650	26	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1972103-1972128	3	0.885
NC_011831_20	20.22\|2771625\|26\|NC_011831\|CRT	2771625-2771650	26	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	2036365-2036390	3	0.885
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	525145-525172	4	0.857
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	178961-178987	4	0.852
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	514747-514773	4	0.852
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	17253-17279	4	0.852
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	728190-728216	4	0.852
NC_011831_39	39.6\|4434239\|27\|NC_011831\|CRT	4434239-4434265	27	NC_022916	Burkholderia phage JG068, complete genome	15521-15547	4	0.852
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_CP017947	Bosea sp. Tri-49 plasmid unnamed1, complete sequence	416070-416097	5	0.821
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_CP017947	Bosea sp. Tri-49 plasmid unnamed1, complete sequence	416190-416217	5	0.821
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_CP017947	Bosea sp. Tri-49 plasmid unnamed1, complete sequence	416214-416241	5	0.821
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	472402-472429	5	0.821
NC_011831_8	8.12\|1281109\|28\|NC_011831\|CRT	1281109-1281136	28	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	525145-525172	5	0.821
NC_011831_8	8.16\|1281325\|28\|NC_011831\|CRT	1281325-1281352	28	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	1411029-1411056	5	0.821
NC_011831_20	20.3\|2770820\|26\|NC_011831\|CRT	2770820-2770845	26	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	311584-311609	5	0.808
NC_011831_20	20.3\|2770820\|26\|NC_011831\|CRT	2770820-2770845	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.4\|2770867\|26\|NC_011831\|CRT	2770867-2770892	26	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	971251-971276	5	0.808
NC_011831_20	20.4\|2770867\|26\|NC_011831\|CRT	2770867-2770892	26	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	932719-932744	5	0.808
NC_011831_20	20.4\|2770867\|26\|NC_011831\|CRT	2770867-2770892	26	NC_010492	Arthrobacter sp. Chr15 plasmid pChr15, complete sequence	22190-22215	5	0.808
NC_011831_20	20.4\|2770867\|26\|NC_011831\|CRT	2770867-2770892	26	NZ_CP020084	Blastomonas fulva strain T2 plasmid unnamed, complete sequence	23085-23110	5	0.808
NC_011831_20	20.4\|2770867\|26\|NC_011831\|CRT	2770867-2770892	26	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	960077-960102	5	0.808
NC_011831_20	20.4\|2770867\|26\|NC_011831\|CRT	2770867-2770892	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.6\|2770953\|26\|NC_011831\|CRT	2770953-2770978	26	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	311584-311609	5	0.808
NC_011831_20	20.6\|2770953\|26\|NC_011831\|CRT	2770953-2770978	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.10\|2771117\|26\|NC_011831\|CRT	2771117-2771142	26	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	311584-311609	5	0.808
NC_011831_20	20.10\|2771117\|26\|NC_011831\|CRT	2771117-2771142	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.11\|2771164\|26\|NC_011831\|CRT	2771164-2771189	26	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	971251-971276	5	0.808
NC_011831_20	20.11\|2771164\|26\|NC_011831\|CRT	2771164-2771189	26	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	932719-932744	5	0.808
NC_011831_20	20.11\|2771164\|26\|NC_011831\|CRT	2771164-2771189	26	NC_010492	Arthrobacter sp. Chr15 plasmid pChr15, complete sequence	22190-22215	5	0.808
NC_011831_20	20.11\|2771164\|26\|NC_011831\|CRT	2771164-2771189	26	NZ_CP020084	Blastomonas fulva strain T2 plasmid unnamed, complete sequence	23085-23110	5	0.808
NC_011831_20	20.11\|2771164\|26\|NC_011831\|CRT	2771164-2771189	26	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	960077-960102	5	0.808
NC_011831_20	20.11\|2771164\|26\|NC_011831\|CRT	2771164-2771189	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.12\|2771211\|26\|NC_011831\|CRT	2771211-2771236	26	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	971251-971276	5	0.808
NC_011831_20	20.12\|2771211\|26\|NC_011831\|CRT	2771211-2771236	26	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	932719-932744	5	0.808
NC_011831_20	20.12\|2771211\|26\|NC_011831\|CRT	2771211-2771236	26	NC_010492	Arthrobacter sp. Chr15 plasmid pChr15, complete sequence	22190-22215	5	0.808
NC_011831_20	20.12\|2771211\|26\|NC_011831\|CRT	2771211-2771236	26	NZ_CP020084	Blastomonas fulva strain T2 plasmid unnamed, complete sequence	23085-23110	5	0.808
NC_011831_20	20.12\|2771211\|26\|NC_011831\|CRT	2771211-2771236	26	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	960077-960102	5	0.808
NC_011831_20	20.12\|2771211\|26\|NC_011831\|CRT	2771211-2771236	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.20\|2771531\|26\|NC_011831\|CRT	2771531-2771556	26	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	311584-311609	5	0.808
NC_011831_20	20.20\|2771531\|26\|NC_011831\|CRT	2771531-2771556	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.21\|2771578\|26\|NC_011831\|CRT	2771578-2771603	26	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	311584-311609	5	0.808
NC_011831_20	20.21\|2771578\|26\|NC_011831\|CRT	2771578-2771603	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.22\|2771625\|26\|NC_011831\|CRT	2771625-2771650	26	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	311584-311609	5	0.808
NC_011831_20	20.22\|2771625\|26\|NC_011831\|CRT	2771625-2771650	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.24\|2771711\|26\|NC_011831\|CRT	2771711-2771736	26	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	971251-971276	5	0.808
NC_011831_20	20.24\|2771711\|26\|NC_011831\|CRT	2771711-2771736	26	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	932719-932744	5	0.808
NC_011831_20	20.24\|2771711\|26\|NC_011831\|CRT	2771711-2771736	26	NC_010492	Arthrobacter sp. Chr15 plasmid pChr15, complete sequence	22190-22215	5	0.808
NC_011831_20	20.24\|2771711\|26\|NC_011831\|CRT	2771711-2771736	26	NZ_CP020084	Blastomonas fulva strain T2 plasmid unnamed, complete sequence	23085-23110	5	0.808
NC_011831_20	20.24\|2771711\|26\|NC_011831\|CRT	2771711-2771736	26	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	960077-960102	5	0.808
NC_011831_20	20.24\|2771711\|26\|NC_011831\|CRT	2771711-2771736	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.25\|2771758\|26\|NC_011831\|CRT	2771758-2771783	26	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	971251-971276	5	0.808
NC_011831_20	20.25\|2771758\|26\|NC_011831\|CRT	2771758-2771783	26	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	932719-932744	5	0.808
NC_011831_20	20.25\|2771758\|26\|NC_011831\|CRT	2771758-2771783	26	NC_010492	Arthrobacter sp. Chr15 plasmid pChr15, complete sequence	22190-22215	5	0.808
NC_011831_20	20.25\|2771758\|26\|NC_011831\|CRT	2771758-2771783	26	NZ_CP020084	Blastomonas fulva strain T2 plasmid unnamed, complete sequence	23085-23110	5	0.808
NC_011831_20	20.25\|2771758\|26\|NC_011831\|CRT	2771758-2771783	26	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	960077-960102	5	0.808
NC_011831_20	20.25\|2771758\|26\|NC_011831\|CRT	2771758-2771783	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_20	20.26\|2771805\|26\|NC_011831\|CRT	2771805-2771830	26	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	971251-971276	5	0.808
NC_011831_20	20.26\|2771805\|26\|NC_011831\|CRT	2771805-2771830	26	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	932719-932744	5	0.808
NC_011831_20	20.26\|2771805\|26\|NC_011831\|CRT	2771805-2771830	26	NC_010492	Arthrobacter sp. Chr15 plasmid pChr15, complete sequence	22190-22215	5	0.808
NC_011831_20	20.26\|2771805\|26\|NC_011831\|CRT	2771805-2771830	26	NZ_CP020084	Blastomonas fulva strain T2 plasmid unnamed, complete sequence	23085-23110	5	0.808
NC_011831_20	20.26\|2771805\|26\|NC_011831\|CRT	2771805-2771830	26	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	960077-960102	5	0.808
NC_011831_20	20.26\|2771805\|26\|NC_011831\|CRT	2771805-2771830	26	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	8805-8830	5	0.808
NC_011831_39	39.1\|4434017\|27\|NC_011831\|CRT	4434017-4434043	27	NC_022916	Burkholderia phage JG068, complete genome	15521-15547	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_022916	Burkholderia phage JG068, complete genome	15521-15547	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP029835	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence	192602-192628	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP033323	Azospirillum brasilense strain Cd plasmid p5, complete sequence	994-1020	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP032350	Azospirillum brasilense strain MTCC4039 plasmid p5, complete sequence	31955-31981	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP012919	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p5, complete sequence	39783-39809	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	428472-428498	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	548630-548656	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP032344	Azospirillum brasilense strain MTCC4038 plasmid p5, complete sequence	143662-143688	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_020562	Sphingomonas sp. MM-1 plasmid pISP1, complete sequence	80217-80243	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP033317	Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence	67236-67262	5	0.815
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	221075-221101	5	0.815
NC_011831_39	39.4\|4434152\|27\|NC_011831\|CRT	4434152-4434178	27	NC_022916	Burkholderia phage JG068, complete genome	15521-15547	5	0.815
NC_011831_39	39.8\|4434326\|27\|NC_011831\|CRT	4434326-4434352	27	NC_022916	Burkholderia phage JG068, complete genome	15521-15547	5	0.815
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	169975-170002	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_CP006988	Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence	330622-330649	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_CP032696	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence	436131-436158	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719709	Rheinheimera phage vB_RspM_Barba5A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719748	Rheinheimera phage vB_RspM_Barba29S, complete genome	10850-10877	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719716	Rheinheimera phage vB_RspM_Barba10A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497235	Rheinheimera phage vB_RspM_barba10-9H, complete genome	73318-73345	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497268	Rheinheimera phage vB_RspM_barba12-9B, complete genome	26371-26398	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719713	Rheinheimera phage vB_RspM_Barba8A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497239	Rheinheimera phage vB_RspM_barba12-6A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719753	Rheinheimera phage vB_RspM_Barba34A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497261	Rheinheimera phage vB_RspM_barba12-8C, complete genome	20827-20854	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497273	Rheinheimera phage vB_RspM_barba12-9G, complete genome	63987-64014	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719746	Rheinheimera phage vB_RspM_Barba28S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497255	Rheinheimera phage vB_RspM_barba12-7G, complete genome	65036-65063	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719734	Rheinheimera phage vB_RspM_Barba21S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497254	Rheinheimera phage vB_RspM_barba12-7F, complete genome	65378-65405	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497238	Rheinheimera phage vB_RspM_barba11-8A, complete genome	65036-65063	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719744	Rheinheimera phage vB_RspM_Barba27S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719717	Rheinheimera phage vB_RspM_Barba10S, complete genome	11013-11040	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719732	Rheinheimera phage vB_RspM_Barba20S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497247	Rheinheimera phage vB_RspM_barba12-6I, complete genome	64885-64912	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497263	Rheinheimera phage vB_RspM_barba12-8F, complete genome	65024-65051	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719711	Rheinheimera phage vB_RspM_Barba6A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497278	Rheinheimera phage vB_RspM_barba13-8A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497250	Rheinheimera phage vB_RspM_barba12-7B, complete genome	63506-63533	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719750	Rheinheimera phage vB_RspM_Barba31A, complete genome	11700-11727	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719727	Rheinheimera phage vB_RspM_Barba17A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719743	Rheinheimera phage vB_RspM_Barba26S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719724	Rheinheimera phage vB_RspM_Barba15A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497276	Rheinheimera phage vB_RspM_barba13-4A, complete genome	48096-48123	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497234	Rheinheimera phage vB_RspM_barba10-9G, complete genome	65042-65069	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719708	Rheinheimera phage vB_RspM_Barba4S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497249	Rheinheimera phage vB_RspM_barba12-7A, complete genome	65036-65063	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NC_048191	Rheinheimera phage vB_RspM_Barba21A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497269	Rheinheimera phage vB_RspM_barba12-9C, complete genome	13626-13653	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497248	Rheinheimera phage vB_RspM_barba12-6J, complete genome	65036-65063	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719725	Rheinheimera phage vB_RspM_Barba15S, complete genome	10850-10877	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719712	Rheinheimera phage vB_RspM_Barba7A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497274	Rheinheimera phage vB_RspM_barba12-9I, complete genome	48096-48123	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497228	Rheinheimera phage vB_RspM_barba10-9A, complete genome	65255-65282	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497271	Rheinheimera phage vB_RspM_barba12-9E, complete genome	65142-65169	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719704	Rheinheimera phage vB_RspM_Barba2S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497244	Rheinheimera phage vB_RspM_barba12-6F, complete genome	22520-22547	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719705	Rheinheimera phage vB_RspM_Barba3A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719706	Rheinheimera phage vB_RspM_Barba3S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NC_048188	Rheinheimera phage vB_RspM_Barba8S, complete genome	11529-11556	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719735	Rheinheimera phage vB_RspM_Barba22A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719751	Rheinheimera phage vB_RspM_Barba32A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NC_048189	Rheinheimera phage vB_RspM_Barba18A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719707	Rheinheimera phage vB_RspM_Barba4A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497277	Rheinheimera phage vB_RspM_barba13-6A, complete genome	26371-26398	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719721	Rheinheimera phage vB_RspM_Barba13A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497233	Rheinheimera phage vB_RspM_barba10-9F, complete genome	63621-63648	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719701	Rheinheimera phage vB_RspM_Barba1A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719722	Rheinheimera phage vB_RspM_Barba14A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497241	Rheinheimera phage vB_RspM_barba12-6C, complete genome	26371-26398	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497252	Rheinheimera phage vB_RspM_barba12-7D, complete genome	26371-26398	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719738	Rheinheimera phage vB_RspM_Barba23S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719737	Rheinheimera phage vB_RspM_Barba23A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719703	Rheinheimera phage vB_RspM_Barba2A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719739	Rheinheimera phage vB_RspM_Barba24S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719715	Rheinheimera phage vB_RspM_Barba9A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719741	Rheinheimera phage vB_RspM_Barba25S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497240	Rheinheimera phage vB_RspM_barba12-6B, complete genome	26496-26523	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719754	Rheinheimera phage vB_RspM_Barba35A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719720	Rheinheimera phage vB_RspM_Barba12S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719749	Rheinheimera phage vB_RspM_Barba30A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719752	Rheinheimera phage vB_RspM_Barba33A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719728	Rheinheimera phage vB_RspM_Barba17S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497253	Rheinheimera phage vB_RspM_barba12-7E, complete genome	22403-22430	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719702	Rheinheimera phage vB_RspM_Barba1S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497229	Rheinheimera phage vB_RspM_barba10-9B, complete genome	65701-65728	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NC_048190	Rheinheimera phage vB_RspM_Barba19A, complete genome	11700-11727	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719718	Rheinheimera phage vB_RspM_Barba11S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719719	Rheinheimera phage vB_RspM_Barba12A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719745	Rheinheimera phage vB_RspM_Barba28A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497251	Rheinheimera phage vB_RspM_barba12-7C, complete genome	65036-65063	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719740	Rheinheimera phage vB_RspM_Barba25A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NC_048187	Rheinheimera phage vB_RspM_Barba5S, complete genome	11529-11556	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719726	Rheinheimera phage vB_RspM_Barba16S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497267	Rheinheimera phage vB_RspM_barba12-9A, complete genome	65190-65217	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497237	Rheinheimera phage vB_RspM_barba10-9J, complete genome	21761-21788	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719742	Rheinheimera phage vB_RspM_Barba26A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497275	Rheinheimera phage vB_RspM_barba12-9J, complete genome	65036-65063	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719736	Rheinheimera phage vB_RspM_Barba22S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497224	Rheinheimera phage vB_RspM_barba1-3A, complete genome	65036-65063	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497262	Rheinheimera phage vB_RspM_barba12-8E, complete genome	51841-51868	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497243	Rheinheimera phage vB_RspM_barba12-6E, complete genome	20039-20066	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719747	Rheinheimera phage vB_RspM_Barba29A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497265	Rheinheimera phage vB_RspM_barba12-8H, complete genome	71753-71780	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497279	Rheinheimera phage vB_RspM_barba5-7A, complete genome	65036-65063	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719723	Rheinheimera phage vB_RspM_Barba14S, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497231	Rheinheimera phage vB_RspM_barba10-9D, complete genome	63506-63533	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK719731	Rheinheimera phage vB_RspM_Barba20A, complete genome	10844-10871	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_LT703506	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 2	251165-251192	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	203292-203319	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497264	Rheinheimera phage vB_RspM_barba12-8G, complete genome	16633-16660	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MN369753	Gordonia phage Sukkupi, complete genome	16766-16793	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497226	Rheinheimera phage vB_RspM_barba10-8B, complete genome	65923-65950	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497232	Rheinheimera phage vB_RspM_barba10-9E, complete genome	60615-60642	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MK376960	Gordonia phage BiPauneto, complete genome	16875-16902	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497256	Rheinheimera phage vB_RspM_barba12-7H, complete genome	22023-22050	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497242	Rheinheimera phage vB_RspM_barba12-6D, complete genome	54358-54385	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497246	Rheinheimera phage vB_RspM_barba12-6H, complete genome	60387-60414	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497260	Rheinheimera phage vB_RspM_barba12-8B, complete genome	58215-58242	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497272	Rheinheimera phage vB_RspM_barba12-9F, complete genome	32451-32478	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497225	Rheinheimera phage vB_RspM_barba10-8A, complete genome	7196-7223	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497257	Rheinheimera phage vB_RspM_barba12-7I, complete genome	54011-54038	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497227	Rheinheimera phage vB_RspM_barba10-8D, complete genome	7196-7223	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497266	Rheinheimera phage vB_RspM_barba12-8I, complete genome	79798-79825	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497270	Rheinheimera phage vB_RspM_barba12-9D, complete genome	58617-58644	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497258	Rheinheimera phage vB_RspM_barba12-7J, complete genome	7196-7223	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497230	Rheinheimera phage vB_RspM_barba10-9C, complete genome	16633-16660	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497259	Rheinheimera phage vB_RspM_barba12-8A, complete genome	54150-54177	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497236	Rheinheimera phage vB_RspM_barba10-9I, complete genome	22721-22748	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MT497245	Rheinheimera phage vB_RspM_barba12-6G, complete genome	54358-54385	6	0.786
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	MN369766	Gordonia phage Yndexa, complete genome	16766-16793	6	0.786
NC_011831_8	8.12\|1281109\|28\|NC_011831\|CRT	1281109-1281136	28	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	203292-203319	6	0.786
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	MK719750	Rheinheimera phage vB_RspM_Barba31A, complete genome	11718-11751	6	0.824
NC_011831_8	8.16\|1281325\|28\|NC_011831\|CRT	1281325-1281352	28	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	754385-754412	6	0.786
NC_011831_8	8.16\|1281325\|28\|NC_011831\|CRT	1281325-1281352	28	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	654064-654091	6	0.786
NC_011831_8	8.16\|1281325\|28\|NC_011831\|CRT	1281325-1281352	28	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	506779-506806	6	0.786
NC_011831_8	8.16\|1281325\|28\|NC_011831\|CRT	1281325-1281352	28	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	563452-563479	6	0.786
NC_011831_8	8.16\|1281325\|28\|NC_011831\|CRT	1281325-1281352	28	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	712998-713025	6	0.786
NC_011831_20	20.3\|2770820\|26\|NC_011831\|CRT	2770820-2770845	26	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	929873-929898	6	0.769
NC_011831_20	20.6\|2770953\|26\|NC_011831\|CRT	2770953-2770978	26	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	929873-929898	6	0.769
NC_011831_20	20.10\|2771117\|26\|NC_011831\|CRT	2771117-2771142	26	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	929873-929898	6	0.769
NC_011831_20	20.20\|2771531\|26\|NC_011831\|CRT	2771531-2771556	26	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	929873-929898	6	0.769
NC_011831_20	20.21\|2771578\|26\|NC_011831\|CRT	2771578-2771603	26	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	929873-929898	6	0.769
NC_011831_20	20.22\|2771625\|26\|NC_011831\|CRT	2771625-2771650	26	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	929873-929898	6	0.769
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	MN693028	Marine virus AFVG_117M90, complete genome	12455-12483	6	0.793
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	MN693028	Marine virus AFVG_117M90, complete genome	12455-12483	6	0.793
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_041927	Sphingobium phage Lacusarx, complete genome	10147-10173	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP046723	Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence	29456-29482	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	4980-5006	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	831831-831857	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	529846-529872	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	533997-534023	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	244381-244407	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP034149	Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence	26782-26808	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	294540-294566	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	MT498058	Gordonia phage Clawz, complete genome	41810-41836	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	549834-549860	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP011450	Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence	330806-330832	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	562370-562396	6	0.778
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP031650	Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence	457984-458010	6	0.778
NC_011831_2	2.3\|688188\|36\|NC_011831\|CRISPRCasFinder,CRT	688188-688223	36	NC_007766	Rhizobium etli CFN 42 plasmid p42f, complete sequence	313830-313865	7	0.806
NC_011831_2	2.3\|688188\|36\|NC_011831\|CRISPRCasFinder,CRT	688188-688223	36	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	441315-441350	7	0.806
NC_011831_2	2.3\|688188\|36\|NC_011831\|CRISPRCasFinder,CRT	688188-688223	36	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	683746-683781	7	0.806
NC_011831_2	2.9\|688189\|36\|NC_011831\|PILER-CR	688189-688224	36	NC_007766	Rhizobium etli CFN 42 plasmid p42f, complete sequence	313830-313865	7	0.806
NC_011831_2	2.9\|688189\|36\|NC_011831\|PILER-CR	688189-688224	36	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	441315-441350	7	0.806
NC_011831_2	2.9\|688189\|36\|NC_011831\|PILER-CR	688189-688224	36	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	683746-683781	7	0.806
NC_011831_8	8.8\|1280881\|34\|NC_011831\|CRT	1280881-1280914	34	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	112254-112287	7	0.794
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	315097-315124	7	0.75
NC_011831_8	8.10\|1281001\|28\|NC_011831\|CRT	1281001-1281028	28	NZ_CP046575	Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence	84133-84160	7	0.75
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	644910-644943	7	0.794
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	NC_023286	Streptomyces sp. F12 plasmid pFRL6, complete sequence	234954-234987	7	0.794
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	403631-403664	7	0.794
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4038276-4038309	7	0.794
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	65572-65605	7	0.794
NC_011831_8	8.16\|1281325\|28\|NC_011831\|CRT	1281325-1281352	28	MN428053	Gordonia phage Denise, complete genome	42857-42884	7	0.75
NC_011831_35	35.4\|4153074\|33\|NC_011831\|CRT	4153074-4153106	33	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	279931-279963	7	0.788
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	525583-525611	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	50532-50560	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	103225-103253	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	123515-123543	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	528136-528164	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1833175-1833203	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	105941-105969	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	159089-159117	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	259208-259236	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1831408-1831436	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	309612-309640	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	104448-104476	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	718333-718361	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	859786-859814	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	334405-334433	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	107267-107295	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	111806-111834	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	103326-103354	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1901572-1901600	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	103331-103359	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	983844-983872	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	100095-100123	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	104477-104505	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	107285-107313	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	117013-117041	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	117013-117041	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	117013-117041	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	117013-117041	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	109879-109907	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	111807-111835	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	111796-111824	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	107162-107190	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	108955-108983	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	100851-100879	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	117013-117041	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	205219-205247	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1974394-1974422	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1974394-1974422	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	280844-280872	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	KY365739	Streptomyces phage BabyGotBac, complete genome	9696-9724	7	0.759
NC_011831_35	35.5\|4153131\|29\|NC_011831\|CRT	4153131-4153159	29	KP876466	Streptomyces phage TP1604, complete genome	9696-9724	7	0.759
NC_011831_35	35.12\|4153523\|33\|NC_011831\|CRT	4153523-4153555	33	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	279931-279963	7	0.788
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	525583-525611	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	50532-50560	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	103225-103253	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	123515-123543	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	528136-528164	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1833175-1833203	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	105941-105969	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	159089-159117	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	259208-259236	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1831408-1831436	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	309612-309640	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	104448-104476	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	718333-718361	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	859786-859814	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	334405-334433	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	107267-107295	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	111806-111834	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	103326-103354	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1901572-1901600	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	103331-103359	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	983844-983872	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	100095-100123	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	104477-104505	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	107285-107313	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	117013-117041	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	117013-117041	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	117013-117041	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	117013-117041	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	109879-109907	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	111807-111835	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	111796-111824	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	107162-107190	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	108955-108983	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	100851-100879	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	117013-117041	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	205219-205247	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	103770-103798	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	101162-101190	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1974394-1974422	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	117641-117669	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1974394-1974422	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	280844-280872	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	KY365739	Streptomyces phage BabyGotBac, complete genome	9696-9724	7	0.759
NC_011831_35	35.13\|4153580\|29\|NC_011831\|CRT	4153580-4153608	29	KP876466	Streptomyces phage TP1604, complete genome	9696-9724	7	0.759
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	631561-631587	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1915122-1915148	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	413037-413063	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	20370-20396	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	20459-20485	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	20365-20391	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	180306-180332	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	614918-614944	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	250271-250297	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	20358-20384	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	20365-20391	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	21699-21725	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	21699-21725	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	20375-20401	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	20406-20432	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	20365-20391	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	21265-21291	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	20373-20399	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	20373-20399	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	20092-20118	7	0.741
NC_011831_39	39.2\|4434065\|27\|NC_011831\|CRT	4434065-4434091	27	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	20372-20398	7	0.741
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	561275-561311	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080592	UNVERIFIED: Staphylococcus phage vB_SauM_EW3, complete genome	18699-18735	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080603	UNVERIFIED: Staphylococcus phage vB_SauM_EW9, complete genome	17064-17100	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080598	UNVERIFIED: Staphylococcus phage vB_SauM_EW6, complete genome	20724-20760	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080599	UNVERIFIED: Staphylococcus phage vB_SauM_EW7, complete genome	17093-17129	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080583	UNVERIFIED: Staphylococcus phage vB_SauM_EW13, complete genome	84543-84579	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080597	UNVERIFIED: Staphylococcus phage vB_SauM_EW5, complete genome	121275-121311	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080586	UNVERIFIED: Staphylococcus phage vB_SauM_EW2, complete genome	64863-64899	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080586	UNVERIFIED: Staphylococcus phage vB_SauM_EW2, complete genome	64872-64908	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080594	UNVERIFIED: Staphylococcus phage vB_SauM_EW4, complete genome	119821-119857	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080594	UNVERIFIED: Staphylococcus phage vB_SauM_EW4, complete genome	119830-119866	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080582	UNVERIFIED: Staphylococcus phage vB_SauM_EW1, complete genome	137724-137760	8	0.784
NC_011831_3	3.9\|689961\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	689961-689997	37	MT080582	UNVERIFIED: Staphylococcus phage vB_SauM_EW1, complete genome	137733-137769	8	0.784
NC_011831_3	3.30\|691510\|37\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	691510-691546	37	MF351863	Synechococcus phage Bellamy, complete genome	44164-44200	8	0.784
NC_011831_3	3.53\|693203\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	693203-693237	35	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	213529-213563	8	0.771
NC_011831_3	3.53\|693203\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	693203-693237	35	MK919472	Mycobacterium phage Benvolio, complete genome	29365-29399	8	0.771
NC_011831_3	3.53\|693203\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	693203-693237	35	KF981601	Mycobacterium phage Echild, complete genome	29389-29423	8	0.771
NC_011831_3	3.53\|693203\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	693203-693237	35	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	341592-341626	8	0.771
NC_011831_8	8.8\|1280881\|34\|NC_011831\|CRT	1280881-1280914	34	NZ_CP019063	Rahnella sp. ERMR1:05 plasmid unnamed1, complete sequence	93022-93055	8	0.765
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	NZ_CP054605	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed6, complete sequence	10900-10933	8	0.765
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	478118-478151	8	0.765
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	KT588442	Mycobacterium phage LadyBird, complete genome	28257-28290	8	0.765
NC_011831_22	22.1\|3037783\|35\|NC_011831\|CRISPRCasFinder	3037783-3037817	35	NZ_CP033082	Glutamicibacter nicotianae strain OTC-16 plasmid unnamed1, complete sequence	35990-36024	8	0.771
NC_011831_3	3.93\|696157\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	696157-696191	35	CP000663	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence	97990-98024	9	0.743
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	97862-97896	9	0.743
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NZ_CP049117	Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence	67648-67682	9	0.743
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NZ_CP014126	Pantoea vagans strain FDAARGOS_160 plasmid unnamed1, complete sequence	7015-7049	9	0.743
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NZ_CP022726	Erwinia persicina strain B64 plasmid pEP1, complete sequence	80407-80441	9	0.743
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NZ_CP020945	Pantoea ananatis strain PNA 97-1R plasmid unamed2, complete sequence	130112-130146	9	0.743
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NZ_CP034473	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_4, complete sequence	40505-40539	9	0.743
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NZ_CP034478	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_4, complete sequence	1814-1848	9	0.743
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NC_019310	Erwinia amylovora plasmid pEM65, complete sequence	55122-55156	9	0.743
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NZ_CP022431	Pantoea ananatis strain YJ76 plasmid p_unamed2	34257-34291	9	0.743
NC_011831_8	8.8\|1280881\|34\|NC_011831\|CRT	1280881-1280914	34	MT657335	Gordonia phage Mariokart, complete genome	2511-2544	9	0.735
NC_011831_8	8.8\|1280881\|34\|NC_011831\|CRT	1280881-1280914	34	MH001459	Mycobacterium phage KittenMittens, complete genome	40686-40719	9	0.735
NC_011831_8	8.8\|1280881\|34\|NC_011831\|CRT	1280881-1280914	34	NC_021307	Mycobacterium phage Severus, complete genome	40685-40718	9	0.735
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	347130-347163	9	0.735
NC_011831_36	36.1\|4163780\|34\|NC_011831\|CRISPRCasFinder	4163780-4163813	34	MN734439	Sphingomonas phage Kharn, complete genome	31890-31923	9	0.735
NC_011831_3	3.21\|690841\|38\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	690841-690878	38	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	209267-209304	10	0.737
NC_011831_3	3.21\|690841\|38\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	690841-690878	38	NZ_CP045090	Burkholderia glumae strain GX plasmid pWSGX2, complete sequence	14719-14756	10	0.737
NC_011831_3	3.28\|691364\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	691364-691398	35	NC_010408	Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1, complete sequence	61792-61826	10	0.714
NC_011831_3	3.67\|694240\|34\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	694240-694273	34	NZ_CP045357	Vibrio sp. THAF64 plasmid pTHAF64_b, complete sequence	46620-46653	10	0.706
NC_011831_3	3.67\|694240\|34\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	694240-694273	34	NZ_CP046164	Vibrio sp. THAF191c plasmid pTHAF191c_c, complete sequence	137223-137256	10	0.706
NC_011831_3	3.67\|694240\|34\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	694240-694273	34	NZ_CP046067	Vibrio sp. THAF191d plasmid pTHAF191d_c, complete sequence	282033-282066	10	0.706
NC_011831_3	3.96\|696378\|32\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	696378-696409	32	NZ_CP006370	Aureimonas sp. AU20 plasmid pAU20c, complete sequence	65285-65316	10	0.688
NC_011831_3	3.96\|696378\|32\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	696378-696409	32	MG592532	Vibrio phage 1.165.O._10N.261.51.B7, partial genome	20026-20057	10	0.688
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NZ_CP032704	Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence	240406-240440	10	0.714
NC_011831_8	8.8\|1280881\|34\|NC_011831\|CRT	1280881-1280914	34	NZ_CP035421	Leisingera sp. NJS204 plasmid unnamed4, complete sequence	104902-104935	10	0.706
NC_011831_8	8.8\|1280881\|34\|NC_011831\|CRT	1280881-1280914	34	MK494124	Mycobacterium phage Kristoff, complete genome	42000-42033	10	0.706
NC_011831_8	8.8\|1280881\|34\|NC_011831\|CRT	1280881-1280914	34	JX411619	Mycobacterium virus Rebeuca, complete genome	42001-42034	10	0.706
NC_011831_8	8.8\|1280881\|34\|NC_011831\|CRT	1280881-1280914	34	NZ_CP038238	Leisingera sp. NJS201 plasmid unnamed4, complete sequence	133044-133077	10	0.706
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	424121-424154	10	0.706
NC_011831_36	36.1\|4163780\|34\|NC_011831\|CRISPRCasFinder	4163780-4163813	34	NC_031050	Enterobacteria phage vB_EcoS_NBD2, complete genome	25440-25473	10	0.706
NC_011831_3	3.67\|694240\|34\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	694240-694273	34	NZ_CP034119	Staphylospora marina strain SCSIO 07575 plasmid unnamed, complete sequence	15881-15914	11	0.676
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NZ_CP022520	Pantoea vagans strain FBS135 plasmid pPant4, complete sequence	54227-54261	11	0.686
NC_011831_3	3.135\|699254\|35\|NC_011831\|CRISPRCasFinder,CRT,PILER-CR	699254-699288	35	NZ_CP028352	Pantoea vagans strain PV989 plasmid pPV989-94, complete sequence	23292-23326	11	0.686
NC_011831_8	8.13\|1281157\|34\|NC_011831\|CRT	1281157-1281190	34	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	513714-513747	11	0.676

1. spacer 8.14|1281211|22|NC_011831|CRT matches to NC_007950 (Polaromonas sp. JS666 plasmid 2, complete sequence) position: , mismatch: 2, identity: 0.909

cggcgtggccgttaccgtcggg	CRISPR spacer
cggcgtggccgttaccttcggt	Protospacer
**************** ****

2. spacer 20.3|2770820|26|NC_011831|CRT matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

3. spacer 20.3|2770820|26|NC_011831|CRT matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcggtggggcgctgggcagcggc	Protospacer
**********.********* *** *

4. spacer 20.3|2770820|26|NC_011831|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

5. spacer 20.3|2770820|26|NC_011831|CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

6. spacer 20.6|2770953|26|NC_011831|CRT matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

7. spacer 20.6|2770953|26|NC_011831|CRT matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcggtggggcgctgggcagcggc	Protospacer
**********.********* *** *

8. spacer 20.6|2770953|26|NC_011831|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

9. spacer 20.6|2770953|26|NC_011831|CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

10. spacer 20.10|2771117|26|NC_011831|CRT matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

11. spacer 20.10|2771117|26|NC_011831|CRT matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcggtggggcgctgggcagcggc	Protospacer
**********.********* *** *

12. spacer 20.10|2771117|26|NC_011831|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

13. spacer 20.10|2771117|26|NC_011831|CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

14. spacer 20.20|2771531|26|NC_011831|CRT matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

15. spacer 20.20|2771531|26|NC_011831|CRT matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcggtggggcgctgggcagcggc	Protospacer
**********.********* *** *

16. spacer 20.20|2771531|26|NC_011831|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

17. spacer 20.20|2771531|26|NC_011831|CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

18. spacer 20.21|2771578|26|NC_011831|CRT matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

19. spacer 20.21|2771578|26|NC_011831|CRT matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcggtggggcgctgggcagcggc	Protospacer
**********.********* *** *

20. spacer 20.21|2771578|26|NC_011831|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

21. spacer 20.21|2771578|26|NC_011831|CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

22. spacer 20.22|2771625|26|NC_011831|CRT matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

23. spacer 20.22|2771625|26|NC_011831|CRT matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcggtggggcgctgggcagcggc	Protospacer
**********.********* *** *

24. spacer 20.22|2771625|26|NC_011831|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

25. spacer 20.22|2771625|26|NC_011831|CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 3, identity: 0.885

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ctggcgctggagcgctgggctgaggc	Protospacer
****** *************** * *

26. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 4, identity: 0.857

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
cgccgttgccgttaccgtcggcggctgt	Protospacer
.**********************  * *

27. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 4, identity: 0.852

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgccgagccggtcag	Protospacer
************** ** ******  *

28. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 4, identity: 0.852

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgccgagccggtcag	Protospacer
************** ** ******  *

29. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.852

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgccgagccggtcag	Protospacer
************** ** ******  *

30. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.852

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgccgagccggtcag	Protospacer
************** ** ******  *

31. spacer 39.6|4434239|27|NC_011831|CRT matches to NC_022916 (Burkholderia phage JG068, complete genome) position: , mismatch: 4, identity: 0.852

cgcaccgaccagcgacgtaccggtgtg	CRISPR spacer
catgccgatcagcgacgtaccggtgtg	Protospacer
*...****.******************

32. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_CP017947 (Bosea sp. Tri-49 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
tgccgttgccgttcccgccggcgttgcc	Protospacer
************* ***.******  *.

33. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_CP017947 (Bosea sp. Tri-49 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
tgccgttgccgttcccgccggcgttgcc	Protospacer
************* ***.******  *.

34. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_CP017947 (Bosea sp. Tri-49 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
tgccgttgccgttcccgccggcgttgcc	Protospacer
************* ***.******  *.

35. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.821

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
tgccgttgccgttgccgtcgtcgcgcca	Protospacer
*************.****** **.*.*

36. spacer 8.12|1281109|28|NC_011831|CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 5, identity: 0.821

tgccgttgccgttaccgtcggggtgtct	CRISPR spacer
cgccgttgccgttaccgtcggcggctgt	Protospacer
.******************** *  * *

37. spacer 8.16|1281325|28|NC_011831|CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 5, identity: 0.821

tggcgtcgccgtcggcgtgtctgttggc	CRISPR spacer
cgacatcgccgtcggcgtctcggttggc	Protospacer
.*.*.************* ** ******

38. spacer 20.3|2770820|26|NC_011831|CRT matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ggtgcgatggagcgttgggctgcgcc	Protospacer
   ***.*******.***********

39. spacer 20.3|2770820|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

40. spacer 20.4|2770867|26|NC_011831|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgcccgc	Protospacer
.*******************  *  *

41. spacer 20.4|2770867|26|NC_011831|CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgccctc	Protospacer
.*******************  * .*

42. spacer 20.4|2770867|26|NC_011831|CRT matches to NC_010492 (Arthrobacter sp. Chr15 plasmid pChr15, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gaggcgttgaagcgctgggctccgcg	Protospacer
  **** ************** ***

43. spacer 20.4|2770867|26|NC_011831|CRT matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
aaggcgatgaagcgctgggctgcaca	Protospacer
  ****.****************.*

44. spacer 20.4|2770867|26|NC_011831|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ctggcggtgaagcgctggggcgatac	Protospacer
******************* .*   *

45. spacer 20.4|2770867|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

46. spacer 20.6|2770953|26|NC_011831|CRT matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ggtgcgatggagcgttgggctgcgcc	Protospacer
   ***.*******.***********

47. spacer 20.6|2770953|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

48. spacer 20.10|2771117|26|NC_011831|CRT matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ggtgcgatggagcgttgggctgcgcc	Protospacer
   ***.*******.***********

49. spacer 20.10|2771117|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

50. spacer 20.11|2771164|26|NC_011831|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgcccgc	Protospacer
.*******************  *  *

51. spacer 20.11|2771164|26|NC_011831|CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgccctc	Protospacer
.*******************  * .*

52. spacer 20.11|2771164|26|NC_011831|CRT matches to NC_010492 (Arthrobacter sp. Chr15 plasmid pChr15, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gaggcgttgaagcgctgggctccgcg	Protospacer
  **** ************** ***

53. spacer 20.11|2771164|26|NC_011831|CRT matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
aaggcgatgaagcgctgggctgcaca	Protospacer
  ****.****************.*

54. spacer 20.11|2771164|26|NC_011831|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ctggcggtgaagcgctggggcgatac	Protospacer
******************* .*   *

55. spacer 20.11|2771164|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

56. spacer 20.12|2771211|26|NC_011831|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgcccgc	Protospacer
.*******************  *  *

57. spacer 20.12|2771211|26|NC_011831|CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgccctc	Protospacer
.*******************  * .*

58. spacer 20.12|2771211|26|NC_011831|CRT matches to NC_010492 (Arthrobacter sp. Chr15 plasmid pChr15, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gaggcgttgaagcgctgggctccgcg	Protospacer
  **** ************** ***

59. spacer 20.12|2771211|26|NC_011831|CRT matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
aaggcgatgaagcgctgggctgcaca	Protospacer
  ****.****************.*

60. spacer 20.12|2771211|26|NC_011831|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ctggcggtgaagcgctggggcgatac	Protospacer
******************* .*   *

61. spacer 20.12|2771211|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

62. spacer 20.20|2771531|26|NC_011831|CRT matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ggtgcgatggagcgttgggctgcgcc	Protospacer
   ***.*******.***********

63. spacer 20.20|2771531|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

64. spacer 20.21|2771578|26|NC_011831|CRT matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ggtgcgatggagcgttgggctgcgcc	Protospacer
   ***.*******.***********

65. spacer 20.21|2771578|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

66. spacer 20.22|2771625|26|NC_011831|CRT matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
ggtgcgatggagcgttgggctgcgcc	Protospacer
   ***.*******.***********

67. spacer 20.22|2771625|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

68. spacer 20.24|2771711|26|NC_011831|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgcccgc	Protospacer
.*******************  *  *

69. spacer 20.24|2771711|26|NC_011831|CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgccctc	Protospacer
.*******************  * .*

70. spacer 20.24|2771711|26|NC_011831|CRT matches to NC_010492 (Arthrobacter sp. Chr15 plasmid pChr15, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gaggcgttgaagcgctgggctccgcg	Protospacer
  **** ************** ***

71. spacer 20.24|2771711|26|NC_011831|CRT matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
aaggcgatgaagcgctgggctgcaca	Protospacer
  ****.****************.*

72. spacer 20.24|2771711|26|NC_011831|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ctggcggtgaagcgctggggcgatac	Protospacer
******************* .*   *

73. spacer 20.24|2771711|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

74. spacer 20.25|2771758|26|NC_011831|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgcccgc	Protospacer
.*******************  *  *

75. spacer 20.25|2771758|26|NC_011831|CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgccctc	Protospacer
.*******************  * .*

76. spacer 20.25|2771758|26|NC_011831|CRT matches to NC_010492 (Arthrobacter sp. Chr15 plasmid pChr15, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gaggcgttgaagcgctgggctccgcg	Protospacer
  **** ************** ***

77. spacer 20.25|2771758|26|NC_011831|CRT matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
aaggcgatgaagcgctgggctgcaca	Protospacer
  ****.****************.*

78. spacer 20.25|2771758|26|NC_011831|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ctggcggtgaagcgctggggcgatac	Protospacer
******************* .*   *

79. spacer 20.25|2771758|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

80. spacer 20.26|2771805|26|NC_011831|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgcccgc	Protospacer
.*******************  *  *

81. spacer 20.26|2771805|26|NC_011831|CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ttggcggtgaagcgctgggcgccctc	Protospacer
.*******************  * .*

82. spacer 20.26|2771805|26|NC_011831|CRT matches to NC_010492 (Arthrobacter sp. Chr15 plasmid pChr15, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gaggcgttgaagcgctgggctccgcg	Protospacer
  **** ************** ***

83. spacer 20.26|2771805|26|NC_011831|CRT matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
aaggcgatgaagcgctgggctgcaca	Protospacer
  ****.****************.*

84. spacer 20.26|2771805|26|NC_011831|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
ctggcggtgaagcgctggggcgatac	Protospacer
******************* .*   *

85. spacer 20.26|2771805|26|NC_011831|CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 5, identity: 0.808

ctggcggtgaagcgctgggctgcgcc	CRISPR spacer
gtggcggtgcagcgctgggctggctc	Protospacer
 ******** ************  .*

86. spacer 39.1|4434017|27|NC_011831|CRT matches to NC_022916 (Burkholderia phage JG068, complete genome) position: , mismatch: 5, identity: 0.815

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
catgccgatcagcgacgtaccggtgtg	Protospacer
*...****.**************.***

87. spacer 39.2|4434065|27|NC_011831|CRT matches to NC_022916 (Burkholderia phage JG068, complete genome) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
catgccgatcagcgacgtaccggtgtg	Protospacer
 ..*****.*********.********

88. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP029835 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccatcgccgtgccggcccg	Protospacer
*********** ** ********. .*

89. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP033323 (Azospirillum brasilense strain Cd plasmid p5, complete sequence) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgacccgcgacgtggcggctcg	Protospacer
********** ******** ***. .*

90. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP032350 (Azospirillum brasilense strain MTCC4039 plasmid p5, complete sequence) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgacccgcgacgtggcggcccg	Protospacer
********** ******** ***. .*

91. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP012919 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p5, complete sequence) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgacccgcgacgtggcggctcg	Protospacer
********** ******** ***. .*

92. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgacctgccacgtgccggccag	Protospacer
********** ** *********.  *

93. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
gtcgccgaccagcgccgtgccggcgcc	Protospacer
* ************ ********.*.

94. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP032344 (Azospirillum brasilense strain MTCC4038 plasmid p5, complete sequence) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgacccgcgacgtggcggctcg	Protospacer
********** ******** ***. .*

95. spacer 39.2|4434065|27|NC_011831|CRT matches to NC_020562 (Sphingomonas sp. MM-1 plasmid pISP1, complete sequence) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
cgcgccgcccagcgacgtgccgtgttg	Protospacer
 ****** **************   **

96. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP033317 (Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgacccgcgacgtggcggctcg	Protospacer
********** ******** ***. .*

97. spacer 39.2|4434065|27|NC_011831|CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 5, identity: 0.815

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgtccagcggcgtgccggccag	Protospacer
******* ******.********.  *

98. spacer 39.4|4434152|27|NC_011831|CRT matches to NC_022916 (Burkholderia phage JG068, complete genome) position: , mismatch: 5, identity: 0.815

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
catgccgatcagcgacgtaccggtgtg	Protospacer
*...****.**************.***

99. spacer 39.8|4434326|27|NC_011831|CRT matches to NC_022916 (Burkholderia phage JG068, complete genome) position: , mismatch: 5, identity: 0.815

cgcaccgaccagcgacgtaccggcgtg	CRISPR spacer
catgccgatcagcgacgtaccggtgtg	Protospacer
*...****.**************.***

100. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
cgccgttgccgtcgccgtcggcgtggtg	Protospacer
.***********..*********** .

101. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
tgccgttgccgataccgacggcgacccg	Protospacer
*********** ***** *****  .*

102. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_CP032696 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
tgccgttgccgataccgacggcgacccg	Protospacer
*********** ***** *****  .*

103. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719709 (Rheinheimera phage vB_RspM_Barba5A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

104. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719748 (Rheinheimera phage vB_RspM_Barba29S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

105. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719716 (Rheinheimera phage vB_RspM_Barba10A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

106. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497235 (Rheinheimera phage vB_RspM_barba10-9H, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

107. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497268 (Rheinheimera phage vB_RspM_barba12-9B, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

108. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719713 (Rheinheimera phage vB_RspM_Barba8A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

109. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497239 (Rheinheimera phage vB_RspM_barba12-6A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

110. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719753 (Rheinheimera phage vB_RspM_Barba34A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

111. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497261 (Rheinheimera phage vB_RspM_barba12-8C, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

112. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497273 (Rheinheimera phage vB_RspM_barba12-9G, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

113. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719746 (Rheinheimera phage vB_RspM_Barba28S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

114. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497255 (Rheinheimera phage vB_RspM_barba12-7G, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

115. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719734 (Rheinheimera phage vB_RspM_Barba21S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

116. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497254 (Rheinheimera phage vB_RspM_barba12-7F, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

117. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497238 (Rheinheimera phage vB_RspM_barba11-8A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

118. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719744 (Rheinheimera phage vB_RspM_Barba27S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

119. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719717 (Rheinheimera phage vB_RspM_Barba10S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

120. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719732 (Rheinheimera phage vB_RspM_Barba20S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

121. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497247 (Rheinheimera phage vB_RspM_barba12-6I, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

122. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497263 (Rheinheimera phage vB_RspM_barba12-8F, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

123. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719711 (Rheinheimera phage vB_RspM_Barba6A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

124. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497278 (Rheinheimera phage vB_RspM_barba13-8A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

125. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497250 (Rheinheimera phage vB_RspM_barba12-7B, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

126. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719750 (Rheinheimera phage vB_RspM_Barba31A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
cgccgttgccgttgccgtcgccgttgcc	Protospacer
.************.****** ***  *.

127. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719727 (Rheinheimera phage vB_RspM_Barba17A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

128. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719743 (Rheinheimera phage vB_RspM_Barba26S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

129. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719724 (Rheinheimera phage vB_RspM_Barba15A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

130. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497276 (Rheinheimera phage vB_RspM_barba13-4A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

131. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497234 (Rheinheimera phage vB_RspM_barba10-9G, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

132. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719708 (Rheinheimera phage vB_RspM_Barba4S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

133. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497249 (Rheinheimera phage vB_RspM_barba12-7A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

134. spacer 8.10|1281001|28|NC_011831|CRT matches to NC_048191 (Rheinheimera phage vB_RspM_Barba21A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

135. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497269 (Rheinheimera phage vB_RspM_barba12-9C, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

136. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497248 (Rheinheimera phage vB_RspM_barba12-6J, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

137. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719725 (Rheinheimera phage vB_RspM_Barba15S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

138. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719712 (Rheinheimera phage vB_RspM_Barba7A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

139. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497274 (Rheinheimera phage vB_RspM_barba12-9I, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

140. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497228 (Rheinheimera phage vB_RspM_barba10-9A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

141. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497271 (Rheinheimera phage vB_RspM_barba12-9E, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

142. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719704 (Rheinheimera phage vB_RspM_Barba2S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

143. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497244 (Rheinheimera phage vB_RspM_barba12-6F, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

144. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719705 (Rheinheimera phage vB_RspM_Barba3A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

145. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719706 (Rheinheimera phage vB_RspM_Barba3S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

146. spacer 8.10|1281001|28|NC_011831|CRT matches to NC_048188 (Rheinheimera phage vB_RspM_Barba8S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

147. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719735 (Rheinheimera phage vB_RspM_Barba22A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

148. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719751 (Rheinheimera phage vB_RspM_Barba32A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

149. spacer 8.10|1281001|28|NC_011831|CRT matches to NC_048189 (Rheinheimera phage vB_RspM_Barba18A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

150. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719707 (Rheinheimera phage vB_RspM_Barba4A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

151. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497277 (Rheinheimera phage vB_RspM_barba13-6A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

152. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719721 (Rheinheimera phage vB_RspM_Barba13A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

153. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497233 (Rheinheimera phage vB_RspM_barba10-9F, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

154. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719701 (Rheinheimera phage vB_RspM_Barba1A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

155. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719722 (Rheinheimera phage vB_RspM_Barba14A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

156. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497241 (Rheinheimera phage vB_RspM_barba12-6C, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

157. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497252 (Rheinheimera phage vB_RspM_barba12-7D, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

158. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719738 (Rheinheimera phage vB_RspM_Barba23S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

159. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719737 (Rheinheimera phage vB_RspM_Barba23A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

160. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719703 (Rheinheimera phage vB_RspM_Barba2A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

161. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719739 (Rheinheimera phage vB_RspM_Barba24S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

162. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719715 (Rheinheimera phage vB_RspM_Barba9A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

163. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719741 (Rheinheimera phage vB_RspM_Barba25S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

164. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497240 (Rheinheimera phage vB_RspM_barba12-6B, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

165. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719754 (Rheinheimera phage vB_RspM_Barba35A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

166. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719720 (Rheinheimera phage vB_RspM_Barba12S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

167. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719749 (Rheinheimera phage vB_RspM_Barba30A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

168. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719752 (Rheinheimera phage vB_RspM_Barba33A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

169. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719728 (Rheinheimera phage vB_RspM_Barba17S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

170. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497253 (Rheinheimera phage vB_RspM_barba12-7E, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

171. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719702 (Rheinheimera phage vB_RspM_Barba1S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

172. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497229 (Rheinheimera phage vB_RspM_barba10-9B, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

173. spacer 8.10|1281001|28|NC_011831|CRT matches to NC_048190 (Rheinheimera phage vB_RspM_Barba19A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
cgccgttgccgttgccgtcgccgttgcc	Protospacer
.************.****** ***  *.

174. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719718 (Rheinheimera phage vB_RspM_Barba11S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

175. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719719 (Rheinheimera phage vB_RspM_Barba12A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

176. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719745 (Rheinheimera phage vB_RspM_Barba28A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

177. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497251 (Rheinheimera phage vB_RspM_barba12-7C, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

178. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719740 (Rheinheimera phage vB_RspM_Barba25A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

179. spacer 8.10|1281001|28|NC_011831|CRT matches to NC_048187 (Rheinheimera phage vB_RspM_Barba5S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

180. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719726 (Rheinheimera phage vB_RspM_Barba16S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

181. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497267 (Rheinheimera phage vB_RspM_barba12-9A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

182. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497237 (Rheinheimera phage vB_RspM_barba10-9J, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

183. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719742 (Rheinheimera phage vB_RspM_Barba26A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

184. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497275 (Rheinheimera phage vB_RspM_barba12-9J, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

185. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719736 (Rheinheimera phage vB_RspM_Barba22S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

186. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497224 (Rheinheimera phage vB_RspM_barba1-3A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

187. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497262 (Rheinheimera phage vB_RspM_barba12-8E, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

188. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497243 (Rheinheimera phage vB_RspM_barba12-6E, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

189. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719747 (Rheinheimera phage vB_RspM_Barba29A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

190. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497265 (Rheinheimera phage vB_RspM_barba12-8H, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

191. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497279 (Rheinheimera phage vB_RspM_barba5-7A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

192. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719723 (Rheinheimera phage vB_RspM_Barba14S, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

193. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497231 (Rheinheimera phage vB_RspM_barba10-9D, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

194. spacer 8.10|1281001|28|NC_011831|CRT matches to MK719731 (Rheinheimera phage vB_RspM_Barba20A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

195. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_LT703506 (Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 2) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
tgccgttgccgttaccggtggcggtgcg	Protospacer
***************** .****   *

196. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
ggccgttgccgctaccgtcggtgtaacc	Protospacer
 **********.*********.**. *.

197. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497264 (Rheinheimera phage vB_RspM_barba12-8G, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

198. spacer 8.10|1281001|28|NC_011831|CRT matches to MN369753 (Gordonia phage Sukkupi, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
caccgttgccgttgccgtcgccgtgacc	Protospacer
..***********.****** **** *.

199. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497226 (Rheinheimera phage vB_RspM_barba10-8B, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

200. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497232 (Rheinheimera phage vB_RspM_barba10-9E, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

201. spacer 8.10|1281001|28|NC_011831|CRT matches to MK376960 (Gordonia phage BiPauneto, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
caccgttgccgttgccgtcgccgtgacc	Protospacer
..***********.****** **** *.

202. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497256 (Rheinheimera phage vB_RspM_barba12-7H, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

203. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497242 (Rheinheimera phage vB_RspM_barba12-6D, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

204. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497246 (Rheinheimera phage vB_RspM_barba12-6H, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

205. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497260 (Rheinheimera phage vB_RspM_barba12-8B, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

206. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497272 (Rheinheimera phage vB_RspM_barba12-9F, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

207. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497225 (Rheinheimera phage vB_RspM_barba10-8A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

208. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497257 (Rheinheimera phage vB_RspM_barba12-7I, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

209. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497227 (Rheinheimera phage vB_RspM_barba10-8D, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

210. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497266 (Rheinheimera phage vB_RspM_barba12-8I, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

211. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497270 (Rheinheimera phage vB_RspM_barba12-9D, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

212. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497258 (Rheinheimera phage vB_RspM_barba12-7J, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

213. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497230 (Rheinheimera phage vB_RspM_barba10-9C, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

214. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497259 (Rheinheimera phage vB_RspM_barba12-8A, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

215. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497236 (Rheinheimera phage vB_RspM_barba10-9I, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

216. spacer 8.10|1281001|28|NC_011831|CRT matches to MT497245 (Rheinheimera phage vB_RspM_barba12-6G, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
agccgttgccgttgccgtcgccgtcgcc	Protospacer
 ************.****** ***  *.

217. spacer 8.10|1281001|28|NC_011831|CRT matches to MN369766 (Gordonia phage Yndexa, complete genome) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
caccgttgccgttgccgtcgccgtgacc	Protospacer
..***********.****** **** *.

218. spacer 8.12|1281109|28|NC_011831|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 6, identity: 0.786

tgccgttgccgttaccgtcggggtgtct	CRISPR spacer
ggccgttgccgctaccgtcggtgtaacc	Protospacer
 **********.********* **. *.

219. spacer 8.13|1281157|34|NC_011831|CRT matches to MK719750 (Rheinheimera phage vB_RspM_Barba31A, complete genome) position: , mismatch: 6, identity: 0.824

ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
cgccgttgccgtcgccgtcgccgtcaccatagcc	Protospacer
 ******* *** ***************.* * *

220. spacer 8.16|1281325|28|NC_011831|CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 6, identity: 0.786

tggcgtcgccgtcggcgtgtctgttggc	CRISPR spacer
cggcgtggccgtcggcctgtctgtcgag	Protospacer
.***** ********* *******.*.

221. spacer 8.16|1281325|28|NC_011831|CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.786

tggcgtcgccgtcggcgtgtctgttggc	CRISPR spacer
cggcgtggccgtcggcctgtctgtcgag	Protospacer
.***** ********* *******.*.

222. spacer 8.16|1281325|28|NC_011831|CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.786

tggcgtcgccgtcggcgtgtctgttggc	CRISPR spacer
cggcgtggccgtcggcctgtctgtcgag	Protospacer
.***** ********* *******.*.

223. spacer 8.16|1281325|28|NC_011831|CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.786

tggcgtcgccgtcggcgtgtctgttggc	CRISPR spacer
cggcgtggccgtcggcctgtctgtcgag	Protospacer
.***** ********* *******.*.

224. spacer 8.16|1281325|28|NC_011831|CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.786

tggcgtcgccgtcggcgtgtctgttggc	CRISPR spacer
cggcgtggccgtcggcctgtctgtcgag	Protospacer
.***** ********* *******.*.

225. spacer 20.3|2770820|26|NC_011831|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.769

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gaactggtggagcgctgggctgggcc	Protospacer
  . .***************** ***

226. spacer 20.6|2770953|26|NC_011831|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.769

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gaactggtggagcgctgggctgggcc	Protospacer
  . .***************** ***

227. spacer 20.10|2771117|26|NC_011831|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.769

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gaactggtggagcgctgggctgggcc	Protospacer
  . .***************** ***

228. spacer 20.20|2771531|26|NC_011831|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.769

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gaactggtggagcgctgggctgggcc	Protospacer
  . .***************** ***

229. spacer 20.21|2771578|26|NC_011831|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.769

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gaactggtggagcgctgggctgggcc	Protospacer
  . .***************** ***

230. spacer 20.22|2771625|26|NC_011831|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.769

ctggcggtggagcgctgggctgcgcc	CRISPR spacer
gaactggtggagcgctgggctgggcc	Protospacer
  . .***************** ***

231. spacer 35.5|4153131|29|NC_011831|CRT matches to MN693028 (Marine virus AFVG_117M90, complete genome) position: , mismatch: 6, identity: 0.793

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcggctgtacgtggcatgggtggtaatg	Protospacer
************ **********  .. *

232. spacer 35.13|4153580|29|NC_011831|CRT matches to MN693028 (Marine virus AFVG_117M90, complete genome) position: , mismatch: 6, identity: 0.793

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcggctgtacgtggcatgggtggtaatg	Protospacer
************ **********  .. *

233. spacer 39.2|4434065|27|NC_011831|CRT matches to NC_041927 (Sphingobium phage Lacusarx, complete genome) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ttccgcgaccagcgacgtgccggtgac	Protospacer
  *  ********************

234. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP046723 (Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
aatgcagaccagcgacgtgccggcgtc	Protospacer
...** *****************.**

235. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
tccgcggaccagcgacgttccggtgat	Protospacer
  *** ************ ******

236. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
tccgcggaccagcgacgttccggtgat	Protospacer
  *** ************ ******

237. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
cgcgtcgaccagcgtcgtgccggttcc	Protospacer
 ***.********* ********* .

238. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
aatgcagaccagcgacgtgccggcgtc	Protospacer
...** *****************.**

239. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
aatgcagaccagcgacgtgccggcgtc	Protospacer
...** *****************.**

240. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP034149 (Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
aatgcagaccagcgacgtgccggcgtc	Protospacer
...** *****************.**

241. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
tccgcggaccagcgacgttccggtgat	Protospacer
  *** ************ ******

242. spacer 39.2|4434065|27|NC_011831|CRT matches to MT498058 (Gordonia phage Clawz, complete genome) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
tacgccgaccggctacgtgccggtggc	Protospacer
 .********.** ***********

243. spacer 39.2|4434065|27|NC_011831|CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
attgccgatcagcgccgtgccggtgtt	Protospacer
. .*****.***** ***********

244. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP011450 (Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
attgccgcccagcgaggtgccggtgtc	Protospacer
. .**** ******* **********

245. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
aatgcagaccagcgacgtgccggcgtc	Protospacer
...** *****************.**

246. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP031650 (Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
aatgcagaccagcgacgtgccggcgtc	Protospacer
...** *****************.**

247. spacer 2.3|688188|36|NC_011831|CRISPRCasFinder,CRT matches to NC_007766 (Rhizobium etli CFN 42 plasmid p42f, complete sequence) position: , mismatch: 7, identity: 0.806

tccgcgcgttggcggcggtctgcgcggtgcggtgcg	CRISPR spacer
tcttcgcgtcggcggcgatctgcgcggtgcggtaaa	Protospacer
**. *****.*******.***************. .

248. spacer 2.3|688188|36|NC_011831|CRISPRCasFinder,CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 7, identity: 0.806

tccgcgcgttggcggcggtctgcgcggtgcggtgcg	CRISPR spacer
tcttcgcgtcggcggcgatctgcgcggtgcggtaaa	Protospacer
**. *****.*******.***************. .

249. spacer 2.3|688188|36|NC_011831|CRISPRCasFinder,CRT matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 7, identity: 0.806

tccgcgcgttggcggcggtctgcgcggtgcggtgcg	CRISPR spacer
tcttcgcgtcggcggcgatctgcgcggtgcggtaaa	Protospacer
**. *****.*******.***************. .

250. spacer 2.9|688189|36|NC_011831|PILER-CR matches to NC_007766 (Rhizobium etli CFN 42 plasmid p42f, complete sequence) position: , mismatch: 7, identity: 0.806

tccgcgcgttggcggcggtctgcgcggtgcggtgcg	CRISPR spacer
tcttcgcgtcggcggcgatctgcgcggtgcggtaaa	Protospacer
**. *****.*******.***************. .

251. spacer 2.9|688189|36|NC_011831|PILER-CR matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 7, identity: 0.806

tccgcgcgttggcggcggtctgcgcggtgcggtgcg	CRISPR spacer
tcttcgcgtcggcggcgatctgcgcggtgcggtaaa	Protospacer
**. *****.*******.***************. .

252. spacer 2.9|688189|36|NC_011831|PILER-CR matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 7, identity: 0.806

tccgcgcgttggcggcggtctgcgcggtgcggtgcg	CRISPR spacer
tcttcgcgtcggcggcgatctgcgcggtgcggtaaa	Protospacer
**. *****.*******.***************. .

253. spacer 8.8|1280881|34|NC_011831|CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 7, identity: 0.794

tgccgtcgggctggccgttaccgtcggcgtgtct-	CRISPR spacer
tccggtcggactggccgataccgtcggc-tgtgcg	Protospacer
* * *****.******* ********** *** .

254. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.75

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
tgccgtcgccgtcaccgtcggcgaacac	Protospacer
******.*****.********** .. .

255. spacer 8.10|1281001|28|NC_011831|CRT matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 7, identity: 0.75

tgccgttgccgttaccgtcggcgtgtct	CRISPR spacer
tgacgttaccgttaccgtcggcgccatc	Protospacer
** ****.***************.  ..

256. spacer 8.13|1281157|34|NC_011831|CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 7, identity: 0.794

--ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
atgaccct--gcgtcgccgtcgccgtcgccgtcgcc	Protospacer
  *.** *  **** ************.****** *

257. spacer 8.13|1281157|34|NC_011831|CRT matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 7, identity: 0.794

ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
atcggttggcctggccgtcgccgtcaccgcggtc	Protospacer
. * ****** ******************. * *

258. spacer 8.13|1281157|34|NC_011831|CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 7, identity: 0.794

--ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
atgaccct--gcgtcgccgtcgccgtcgccgtcgcc	Protospacer
  *.** *  **** ************.****** *

259. spacer 8.13|1281157|34|NC_011831|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.794

ggccgt-tggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
-gcagcgcgccgtcgccgtcgccgtcgccgtcggc	Protospacer
 ** *. .* *** ************.********

260. spacer 8.13|1281157|34|NC_011831|CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.794

-ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
cgcccggcag-gtcgccgtcgccgtcgccgtcggc	Protospacer
 * *** ..* ** ************.********

261. spacer 8.16|1281325|28|NC_011831|CRT matches to MN428053 (Gordonia phage Denise, complete genome) position: , mismatch: 7, identity: 0.75

tggcgtcgccgtcggcgtgtctgttggc	CRISPR spacer
tggcgtcgtcgtcggcgtgtcgacccgg	Protospacer
********.************ ... *

262. spacer 35.4|4153074|33|NC_011831|CRT matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 7, identity: 0.788

gagccgcacagccggagccgcacagccggagcc	CRISPR spacer
gagccgcacagcctgatccgcacactcaccgcc	Protospacer
************* ** ******* .*.  ***

263. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

264. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

265. spacer 35.5|4153131|29|NC_011831|CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

266. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

267. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

268. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

269. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

270. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

271. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

272. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

273. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

274. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

275. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

276. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

277. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

278. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

279. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

280. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

281. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

282. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

283. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

284. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

285. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

286. spacer 35.5|4153131|29|NC_011831|CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

287. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

288. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

289. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

290. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

291. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

292. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

293. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

294. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

295. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

296. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

297. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

298. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

299. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

300. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

301. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

302. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

303. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

304. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

305. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

306. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

307. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

308. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

309. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

310. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

311. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

312. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

313. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

314. spacer 35.5|4153131|29|NC_011831|CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

315. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

316. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

317. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

318. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

319. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

320. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

321. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

322. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

323. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

324. spacer 35.5|4153131|29|NC_011831|CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

325. spacer 35.5|4153131|29|NC_011831|CRT matches to KY365739 (Streptomyces phage BabyGotBac, complete genome) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
gcctgctggacggtgcatgggtgcgggtc	Protospacer
  * **** **** *************

326. spacer 35.5|4153131|29|NC_011831|CRT matches to KP876466 (Streptomyces phage TP1604, complete genome) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
gcctgctggacggtgcatgggtgcgggtc	Protospacer
  * **** **** *************

327. spacer 35.12|4153523|33|NC_011831|CRT matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 7, identity: 0.788

gagccgcacagccggagccgcacagccggagcc	CRISPR spacer
gagccgcacagcctgatccgcacactcaccgcc	Protospacer
************* ** ******* .*.  ***

328. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

329. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

330. spacer 35.13|4153580|29|NC_011831|CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

331. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

332. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

333. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

334. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

335. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

336. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

337. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

338. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

339. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

340. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

341. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

342. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

343. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

344. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

345. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

346. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

347. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

348. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

349. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

350. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

351. spacer 35.13|4153580|29|NC_011831|CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

352. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

353. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

354. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

355. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

356. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

357. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

358. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

359. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

360. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

361. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

362. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

363. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

364. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

365. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

366. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

367. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

368. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

369. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

370. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

371. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

372. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

373. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

374. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

375. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

376. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

377. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

378. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

379. spacer 35.13|4153580|29|NC_011831|CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

380. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

381. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

382. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

383. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

384. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

385. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

386. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

387. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

388. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

389. spacer 35.13|4153580|29|NC_011831|CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
tgcgcctgtacggggcatgggccaagggc	Protospacer
**** ****************.  .**.

390. spacer 35.13|4153580|29|NC_011831|CRT matches to KY365739 (Streptomyces phage BabyGotBac, complete genome) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
gcctgctggacggtgcatgggtgcgggtc	Protospacer
  * **** **** *************

391. spacer 35.13|4153580|29|NC_011831|CRT matches to KP876466 (Streptomyces phage TP1604, complete genome) position: , mismatch: 7, identity: 0.759

tgcggctgtacggggcatgggtgcgggag	CRISPR spacer
gcctgctggacggtgcatgggtgcgggtc	Protospacer
  * **** **** *************

392. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

393. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

394. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

395. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

396. spacer 39.2|4434065|27|NC_011831|CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

397. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

398. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

399. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

400. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

401. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

402. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

403. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

404. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

405. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

406. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

407. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

408. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

409. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

410. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

411. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

412. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

413. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

414. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

415. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

416. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

417. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

418. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

419. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

420. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

421. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

422. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

423. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

424. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

425. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

426. spacer 39.2|4434065|27|NC_011831|CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

ggcgccgaccagcgacgtgccggtgtg	CRISPR spacer
ggcgccgaccagcgacgtgatctcgcc	Protospacer
******************* .  .*.

427. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
gcttgttcttcttctgtttcttccggttcttcagcat	Protospacer
 *.  * .************************ *.**

428. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080592 (UNVERIFIED: Staphylococcus phage vB_SauM_EW3, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttcaggttcctctgaag	Protospacer
**. .****************** *****.**.* *

429. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080603 (UNVERIFIED: Staphylococcus phage vB_SauM_EW9, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttcaggttcctctgaag	Protospacer
**. .****************** *****.**.* *

430. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080598 (UNVERIFIED: Staphylococcus phage vB_SauM_EW6, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttcaggttcctctgaag	Protospacer
**. .****************** *****.**.* *

431. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080599 (UNVERIFIED: Staphylococcus phage vB_SauM_EW7, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttcaggttcctctgaag	Protospacer
**. .****************** *****.**.* *

432. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080583 (UNVERIFIED: Staphylococcus phage vB_SauM_EW13, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttcaggttcctctgaag	Protospacer
**. .****************** *****.**.* *

433. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080597 (UNVERIFIED: Staphylococcus phage vB_SauM_EW5, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttcaggttcctctgaag	Protospacer
**. .****************** *****.**.* *

434. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080586 (UNVERIFIED: Staphylococcus phage vB_SauM_EW2, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttcaggttcctctgaag	Protospacer
**. .****************** *****.**.* *

435. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080586 (UNVERIFIED: Staphylococcus phage vB_SauM_EW2, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttctgtttcttcaggtt	Protospacer
**. .******************.* ****** *  *

436. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080594 (UNVERIFIED: Staphylococcus phage vB_SauM_EW4, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttcaggttcctctgaag	Protospacer
**. .****************** *****.**.* *

437. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080594 (UNVERIFIED: Staphylococcus phage vB_SauM_EW4, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttctgtttcttcaggtt	Protospacer
**. .******************.* ****** *  *

438. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080582 (UNVERIFIED: Staphylococcus phage vB_SauM_EW1, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttcaggttcctctgaag	Protospacer
**. .****************** *****.**.* *

439. spacer 3.9|689961|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MT080582 (UNVERIFIED: Staphylococcus phage vB_SauM_EW1, complete genome) position: , mismatch: 8, identity: 0.784

tccattgtttcttctgtttcttccggttcttccgtat	CRISPR spacer
tcttctgtttcttctgtttcttctgtttcttcaggtt	Protospacer
**. .******************.* ****** *  *

440. spacer 3.30|691510|37|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MF351863 (Synechococcus phage Bellamy, complete genome) position: , mismatch: 8, identity: 0.784

gcaacgaactacaacgattgcagaaccaacagtttgt---	CRISPR spacer
ataacgaactacaacaattccagaaccacc---ttgtccg	Protospacer
..*************.*** ******** *   ****

441. spacer 3.53|693203|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 8, identity: 0.771

tcgacccgaccaccgggatcgcgctccccacggcc	CRISPR spacer
tcgacccgaccaccgtgatcgcgatcgcggtgatc	Protospacer
*************** ******* ** * ..*..*

442. spacer 3.53|693203|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MK919472 (Mycobacterium phage Benvolio, complete genome) position: , mismatch: 8, identity: 0.771

tcgacccgaccaccgggatcgcgctccccacggcc	CRISPR spacer
ccgacttcgccaccgggatcgagatccccacggct	Protospacer
.****.. .************ * **********.

443. spacer 3.53|693203|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to KF981601 (Mycobacterium phage Echild, complete genome) position: , mismatch: 8, identity: 0.771

tcgacccgaccaccgggatcgcgctccccacggcc	CRISPR spacer
ccgacttcgccaccgggatcgagatccccacggct	Protospacer
.****.. .************ * **********.

444. spacer 3.53|693203|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 8, identity: 0.771

tcgac-ccgaccaccgggatcgcgctccccacggcc	CRISPR spacer
-cgatgccgaccaccgggatggcgctcgccaggttg	Protospacer
 ***. ************** ****** *** * .

445. spacer 8.8|1280881|34|NC_011831|CRT matches to NZ_CP019063 (Rahnella sp. ERMR1:05 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

tgccgtcgggctggccgttaccgtcggcgtgtct	CRISPR spacer
ttctgtcgggctgggcattaccgtcggcgcgctc	Protospacer
* *.********** *.************.*...

446. spacer 8.13|1281157|34|NC_011831|CRT matches to NZ_CP054605 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.765

ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
ggcctttggcgtggctgtcgccgtcagcaccccg	Protospacer
**** **********.********** *..*

447. spacer 8.13|1281157|34|NC_011831|CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.765

ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
cgccgttggcgtgccggtcgccgtcttctcctgc	Protospacer
 ************ * ********* .* .* **

448. spacer 8.13|1281157|34|NC_011831|CRT matches to KT588442 (Mycobacterium phage LadyBird, complete genome) position: , mismatch: 8, identity: 0.765

ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
cgtcgcggcggtggccgtcgccgtcatcttcggc	Protospacer
 *.**. *  ****************.* *****

449. spacer 22.1|3037783|35|NC_011831|CRISPRCasFinder matches to NZ_CP033082 (Glutamicibacter nicotianae strain OTC-16 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

tcgattggatcgatcacccacacatcttcacgctc	CRISPR spacer
ttggtcgcgtcgatcacccacgcatcctcacgctg	Protospacer
*.*.*.* .************.****.*******

450. spacer 3.93|696157|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to CP000663 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence) position: , mismatch: 9, identity: 0.743

accaaatatgcagctctgccgccacctcgccgtcg	CRISPR spacer
gcggcttgcgcagctctgccgccgcctcgccctcg	Protospacer
.* .  *..**************.******* ***

451. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 9, identity: 0.743

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ctcctgttcagcgtctttgccgtgatgtatctggc	Protospacer
 .*.*********** ************* .  *

452. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049117 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ttcctgttcagcgtctttgccgtgatgtatctggc	Protospacer
 .*.*********** ************* .  *

453. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014126 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ctcctgttcagcgtctttgccgtgatgtatctggc	Protospacer
 .*.*********** ************* .  *

454. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022726 (Erwinia persicina strain B64 plasmid pEP1, complete sequence) position: , mismatch: 9, identity: 0.743

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ctcctgttcagcgtctttgccgtgatgtatctggc	Protospacer
 .*.*********** ************* .  *

455. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020945 (Pantoea ananatis strain PNA 97-1R plasmid unamed2, complete sequence) position: , mismatch: 9, identity: 0.743

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ttcctgttcagcgtctttgccgtgatgtatctggc	Protospacer
 .*.*********** ************* .  *

456. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034473 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_4, complete sequence) position: , mismatch: 9, identity: 0.743

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ctcctgttcagcgtctttgccgtgatgtatctggc	Protospacer
 .*.*********** ************* .  *

457. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034478 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_4, complete sequence) position: , mismatch: 9, identity: 0.743

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ctcctgttcagcgtctttgccgtgatgtatctggc	Protospacer
 .*.*********** ************* .  *

458. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NC_019310 (Erwinia amylovora plasmid pEM65, complete sequence) position: , mismatch: 9, identity: 0.743

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ctcctgttcagcgtctttgccgtgatgtatctggc	Protospacer
 .*.*********** ************* .  *

459. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022431 (Pantoea ananatis strain YJ76 plasmid p_unamed2) position: , mismatch: 9, identity: 0.743

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ttcctgttcagcgtctttgccgtgatgtatctggc	Protospacer
 .*.*********** ************* .  *

460. spacer 8.8|1280881|34|NC_011831|CRT matches to MT657335 (Gordonia phage Mariokart, complete genome) position: , mismatch: 9, identity: 0.735

tgccgtcgggctggccgttaccgtcggcgtgtct	CRISPR spacer
cggcgtcgggcaggacgttaccgtcggccccaat	Protospacer
.* ******** ** ************* .   *

461. spacer 8.8|1280881|34|NC_011831|CRT matches to MH001459 (Mycobacterium phage KittenMittens, complete genome) position: , mismatch: 9, identity: 0.735

tgccgtcgggctggccgttaccgtcg-gcgtgtct	CRISPR spacer
acccgtcgcgctggccgttcccgtcgctcacggc-	Protospacer
  ****** ********** ******  *..* *

462. spacer 8.8|1280881|34|NC_011831|CRT matches to NC_021307 (Mycobacterium phage Severus, complete genome) position: , mismatch: 9, identity: 0.735

tgccgtcgggctggccgttaccgtcg-gcgtgtct	CRISPR spacer
acccgtcgcgctggccgttcccgtcgctcacggc-	Protospacer
  ****** ********** ******  *..* *

463. spacer 8.13|1281157|34|NC_011831|CRT matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 9, identity: 0.735

ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
tgccgttggcgaggacgtcgccgtccatgccgcg	Protospacer
 ********** ** **********  .*.**

464. spacer 36.1|4163780|34|NC_011831|CRISPRCasFinder matches to MN734439 (Sphingomonas phage Kharn, complete genome) position: , mismatch: 9, identity: 0.735

tgctgcatttgcaacgcctgccttcacgatgaca	CRISPR spacer
cgaaccgattgcatcgccagccttcacgatgata	Protospacer
.*   *. ***** **** *************.*

465. spacer 3.21|690841|38|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 10, identity: 0.737

acagcacctgtgctgccgtgtccggctgtgatgccgct	CRISPR spacer
acagcaccggggctgccgtgtccggctcgcgcaacgca	Protospacer
******** * ****************   ... ***

466. spacer 3.21|690841|38|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045090 (Burkholderia glumae strain GX plasmid pWSGX2, complete sequence) position: , mismatch: 10, identity: 0.737

acagcacctgtgctgccgtgtccggctgtgatgccgct	CRISPR spacer
acagcaccggggctgccgtgtccggctcgcgcaacgca	Protospacer
******** * ****************   ... ***

467. spacer 3.28|691364|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NC_010408 (Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1, complete sequence) position: , mismatch: 10, identity: 0.714

ttcccgtcggacaacgggtgcgtgtgaccattcaa	CRISPR spacer
atctcgtcggacaccgggtgcgtgtggctggcgat	Protospacer
 **.********* ************.*.. . *

468. spacer 3.67|694240|34|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045357 (Vibrio sp. THAF64 plasmid pTHAF64_b, complete sequence) position: , mismatch: 10, identity: 0.706

cttgaagttcgctatgtattggatgaggaaagat	CRISPR spacer
aaaggtgttcgctatgtatctgatgaggaagcaa	Protospacer
   *. *************. *********. *

469. spacer 3.67|694240|34|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046164 (Vibrio sp. THAF191c plasmid pTHAF191c_c, complete sequence) position: , mismatch: 10, identity: 0.706

cttgaagttcgctatgtattggatgaggaaagat	CRISPR spacer
aaaggtgttcgctatgtatctgatgaggaagcaa	Protospacer
   *. *************. *********. *

470. spacer 3.67|694240|34|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046067 (Vibrio sp. THAF191d plasmid pTHAF191d_c, complete sequence) position: , mismatch: 10, identity: 0.706

cttgaagttcgctatgtattggatgaggaaagat	CRISPR spacer
aaaggtgttcgctatgtatctgatgaggaagcaa	Protospacer
   *. *************. *********. *

471. spacer 3.96|696378|32|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006370 (Aureimonas sp. AU20 plasmid pAU20c, complete sequence) position: , mismatch: 10, identity: 0.688

tggtgatcgcatacgcaaccgcaccgtgctgg	CRISPR spacer
gcttcgcgtcaaacgcagccgcaccgtgctgg	Protospacer
   * ..  ** *****.**************

472. spacer 3.96|696378|32|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to MG592532 (Vibrio phage 1.165.O._10N.261.51.B7, partial genome) position: , mismatch: 10, identity: 0.688

tggtgatcgcatacgcaaccgcaccgtgctgg	CRISPR spacer
tccagatcgcaaacacaaccgcaccgtcaaac	Protospacer
*   ******* **.************   .

473. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032704 (Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.714

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ctgctgttcagcgtctttgccgtgatgtatctggc	Protospacer
 . .*********** ************* .  *

474. spacer 8.8|1280881|34|NC_011831|CRT matches to NZ_CP035421 (Leisingera sp. NJS204 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

tgccgtcgggctggccgttaccgtcggcgtgtct	CRISPR spacer
gtaaaccgggctggcggttaccgtcgccgtggtt	Protospacer
    ..********* ********** **** .*

475. spacer 8.8|1280881|34|NC_011831|CRT matches to MK494124 (Mycobacterium phage Kristoff, complete genome) position: , mismatch: 10, identity: 0.706

tgccgtcgggctggccgttaccgtcggcgtgtct	CRISPR spacer
agccgtcgcgctggccgttcccgtcgctgacggc	Protospacer
 ******* ********** ****** .*    .

476. spacer 8.8|1280881|34|NC_011831|CRT matches to JX411619 (Mycobacterium virus Rebeuca, complete genome) position: , mismatch: 10, identity: 0.706

tgccgtcgggctggccgttaccgtcggcgtgtct	CRISPR spacer
agccgtcgcgctggccgttcccgtcgctgacggc	Protospacer
 ******* ********** ****** .*    .

477. spacer 8.8|1280881|34|NC_011831|CRT matches to NZ_CP038238 (Leisingera sp. NJS201 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

tgccgtcgggctggccgttaccgtcggcgtgtct	CRISPR spacer
gtgaaccgggctggcggttaccgtcgccgtggtt	Protospacer
    ..********* ********** **** .*

478. spacer 8.13|1281157|34|NC_011831|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 10, identity: 0.706

ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
gctttccggcgtgccggtcgccgtcaccgtcacc	Protospacer
* .. ..****** * ***************. *

479. spacer 36.1|4163780|34|NC_011831|CRISPRCasFinder matches to NC_031050 (Enterobacteria phage vB_EcoS_NBD2, complete genome) position: , mismatch: 10, identity: 0.706

tgctgcatttgcaacgcctgccttcacgatgaca	CRISPR spacer
gggaacgtttgcaacgtctgccttcatgatgggc	Protospacer
 *  .*.*********.*********.****.

480. spacer 3.67|694240|34|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034119 (Staphylospora marina strain SCSIO 07575 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

cttgaagttcgctatgtattggatgaggaaagat	CRISPR spacer
gacgcctttccctatgtattcgatgaggaaaagg	Protospacer
  .*   *** ********* **********..

481. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022520 (Pantoea vagans strain FBS135 plasmid pPant4, complete sequence) position: , mismatch: 11, identity: 0.686

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ctgctgttcagcgtttttgccgtgatgtatctggc	Protospacer
 . .**********. ************* .  *

482. spacer 3.135|699254|35|NC_011831|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028352 (Pantoea vagans strain PV989 plasmid pPV989-94, complete sequence) position: , mismatch: 11, identity: 0.686

gccttgttcagcgtcgttgccgtgatgtagtgcga	CRISPR spacer
ctgctgttcagcgtttttgccgtgatgtatctggc	Protospacer
 . .**********. ************* .  *

483. spacer 8.13|1281157|34|NC_011831|CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.676

ggccgttggcgtggccgtcgccgtcaccgtcggc	CRISPR spacer
gttgcccaccgtcgccgtccccgtcaccgtcgga	Protospacer
* .  ... *** ****** *************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1780378 : 1846459

Tupanvirus(36.36%)

tRNA,transposase,tail,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015940217.1\|1780378_1781998_+\|tRNA	glycine--tRNA ligase	A0A2K9L8E7	Tupanvirus	1.1e-33	27.5
WP_015940218.1\|1781974_1782904_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_015940219.1\|1783161_1783593_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_015940220.1\|1783630_1785556_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.9e-62	30.9
WP_015940221.1\|1785552_1787430_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.1e-53	30.6
WP_015940222.1\|1788207_1790922_-	hypothetical protein	NA	NA	NA	NA
WP_015940223.1\|1790947_1792414_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_015940224.1\|1792517_1792763_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_015940225.1\|1792856_1793342_+	transcriptional repressor	NA	NA	NA	NA
WP_015940226.1\|1793417_1793966_-	hypothetical protein	NA	NA	NA	NA
WP_015940227.1\|1793976_1794600_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_015940228.1\|1794607_1796047_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_015940229.1\|1796219_1797566_-	acetyl ornithine aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	1.0e-37	32.6
WP_015940230.1\|1799149_1800826_-	energy-dependent translational throttle protein EttA	A0A2K9L0W2	Tupanvirus	2.4e-44	27.2
WP_015940231.1\|1801215_1802154_+	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	2.9e-36	34.5
WP_083768878.1\|1803434_1803983_+	cytidine deaminase	NA	NA	NA	NA
WP_015940234.1\|1804094_1804976_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_015940235.1\|1805052_1805700_-	hypothetical protein	NA	NA	NA	NA
WP_041470426.1\|1806094_1809052_-	hypothetical protein	NA	NA	NA	NA
WP_015940237.1\|1809137_1809536_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_015940238.1\|1809649_1810195_-	50S ribosomal protein L10	NA	NA	NA	NA
WP_015940239.1\|1810417_1811131_-	50S ribosomal protein L1	NA	NA	NA	NA
WP_015940240.1\|1811191_1811617_-	50S ribosomal protein L11	NA	NA	NA	NA
WP_015940241.1\|1811700_1812264_-	transcription termination/antitermination protein NusG	NA	NA	NA	NA
WP_015940242.1\|1812287_1812515_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_015940243.1\|1812586_1813792_-	elongation factor Tu	A0A2K9L516	Tupanvirus	6.9e-14	26.2
WP_085953541.1\|1814423_1814747_+	hypothetical protein	NA	NA	NA	NA
WP_015940245.1\|1814760_1815522_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_015940247.1\|1817040_1818447_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_041470967.1\|1818640_1819027_+	hypothetical protein	NA	NA	NA	NA
WP_015940249.1\|1819046_1819559_+	adenylyltransferase/cytidyltransferase family protein	Q58M46	Prochlorococcus_phage	5.9e-15	35.3
WP_015940250.1\|1820092_1823278_-	hypothetical protein	NA	NA	NA	NA
WP_015940251.1\|1823409_1825578_-	hypothetical protein	NA	NA	NA	NA
WP_015940252.1\|1825664_1828166_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_015940253.1\|1828162_1830664_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_015940254.1\|1830766_1831117_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_015940255.1\|1831116_1831437_-	hypothetical protein	NA	NA	NA	NA
WP_015940256.1\|1831436_1831922_-\|plate	baseplate assembly protein	J9PUM0	Bacillus_phage	3.1e-05	33.8
WP_015940257.1\|1831918_1833046_-	hypothetical protein	NA	NA	NA	NA
WP_015940258.1\|1833052_1833349_-	hypothetical protein	NA	NA	NA	NA
WP_015940259.1\|1833390_1834023_-	hypothetical protein	NA	NA	NA	NA
WP_015940260.1\|1834040_1834982_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_015940261.1\|1834986_1839315_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_041470968.1\|1839317_1839590_-	hypothetical protein	NA	NA	NA	NA
WP_015940263.1\|1839614_1841534_-	ATP-binding protein	A0A109WUE1	Acidianus_tailed_spindle_virus	1.4e-08	37.5
WP_015940264.1\|1841530_1842844_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_015940265.1\|1842840_1843593_-	hypothetical protein	NA	NA	NA	NA
WP_015940266.1\|1843570_1844269_-	hypothetical protein	NA	NA	NA	NA
WP_015940267.1\|1844328_1844853_-\|tail	phage tail protein	NA	NA	NA	NA
WP_015940268.1\|1844890_1846459_-\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	4.4e-53	31.0

DBSCAN-SWA_2

2612108 : 2668082

Tupanvirus(15.38%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015940865.1\|2612108_2613119_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_015940866.1\|2613481_2615431_+	hypothetical protein	NA	NA	NA	NA
WP_015940867.1\|2615880_2617242_-	TrpB-like pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_083768900.1\|2617961_2619407_-\|transposase	IS200/IS605 family transposase	A0A1P8DJG9	Virus_Rctr71	1.3e-104	54.9
WP_015940870.1\|2620303_2621818_+	phytoene desaturase	NA	NA	NA	NA
WP_015940871.1\|2622093_2622540_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_015940872.1\|2622621_2623413_+	DUF429 domain-containing protein	NA	NA	NA	NA
WP_015940873.1\|2623797_2624379_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_015940874.1\|2624397_2625669_+	MgtC/SapB family protein	NA	NA	NA	NA
WP_041471013.1\|2625685_2626126_-	isoprenylcysteine carboxyl methyltransferase	NA	NA	NA	NA
WP_015940876.1\|2626170_2626758_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_015940877.1\|2626793_2627408_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_085953509.1\|2627761_2628373_-	bifunctional nuclease family protein	NA	NA	NA	NA
WP_015940879.1\|2628502_2629903_+	LysM peptidoglycan-binding domain-containing M23 family metallopeptidase	G8I8L5	Mycobacterium_phage	1.7e-16	42.9
WP_015940880.1\|2630037_2630850_+	ParA family protein	Q8JL10	Natrialba_phage	1.1e-20	35.6
WP_015940881.1\|2630846_2631950_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	2.6e-15	38.8
WP_015940882.1\|2631953_2632862_+	ribokinase	NA	NA	NA	NA
WP_015940883.1\|2632921_2633560_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_015940884.1\|2633581_2633872_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_015940885.1\|2633976_2634414_+	hypothetical protein	NA	NA	NA	NA
WP_015940886.1\|2634492_2635278_-	DUF4397 domain-containing protein	NA	NA	NA	NA
WP_015940887.1\|2635713_2637075_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_015940888.1\|2637172_2637703_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.7e-26	37.5
WP_015940889.1\|2637706_2638735_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_015940890.1\|2638793_2639567_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_015940891.1\|2639595_2640546_-	SDR family oxidoreductase	A0A2K9KZK0	Tupanvirus	1.2e-61	41.1
WP_015940892.1\|2640628_2641642_-	NAD-dependent epimerase/dehydratase family protein	A0A2K9L4U8	Tupanvirus	3.1e-31	28.5
WP_015940893.1\|2641638_2642772_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A0F7LAY0	uncultured_marine_virus	3.2e-21	32.4
WP_015940894.1\|2642954_2643137_+	hypothetical protein	NA	NA	NA	NA
WP_015940895.1\|2643273_2643924_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_015940896.1\|2644026_2644800_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_015940897.1\|2644825_2646109_-	glucose dehydrogenase	NA	NA	NA	NA
WP_015940898.1\|2647568_2650373_-	DNA polymerase III subunit epsilon	A0A127AW80	Bacillus_phage	3.2e-78	30.2
WP_015940899.1\|2650453_2651335_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_015940900.1\|2651597_2652179_+	hypothetical protein	NA	NA	NA	NA
WP_157044858.1\|2652282_2652522_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_041470509.1\|2652538_2652814_+	hypothetical protein	NA	NA	NA	NA
WP_041470512.1\|2652979_2653429_+\|transposase	transposase	NA	NA	NA	NA
WP_015940901.1\|2653507_2654086_+	hypothetical protein	NA	NA	NA	NA
WP_015940902.1\|2654106_2655240_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_015940903.1\|2655462_2655768_+	hypothetical protein	NA	NA	NA	NA
WP_015940904.1\|2655764_2656685_+	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA
WP_015940905.1\|2656692_2657124_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_015940906.1\|2657290_2658745_+	trigger factor	NA	NA	NA	NA
WP_015940907.1\|2658754_2659420_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	6.5e-46	49.7
WP_015940908.1\|2659481_2660771_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.4e-121	55.1
WP_041470514.1\|2660833_2661571_+	response regulator transcription factor	B5LWA6	Feldmannia_species_virus	8.0e-05	29.1
WP_015940910.1\|2661706_2662336_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_015940911.1\|2662397_2663525_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_015940912.1\|2663653_2664466_+	hypothetical protein	NA	NA	NA	NA
WP_015940913.1\|2664597_2667285_-	cation-translocating P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	5.2e-86	32.5
WP_083768902.1\|2667557_2668082_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_011831

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CRISPR-Cas detection and classification

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