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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_012225 Brachyspira hyodysenteriae WA1, complete sequence 9 crisprs DinG,cas4,csa3 0 4 2 0
NC_012226 Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NC_012225
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012225_1 531506-531598 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012225_2 891967-892590 Orphan NA
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012225_3 1412596-1412928 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012225_4 1623258-1623433 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012225_5 1885151-1885252 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012225_6 2092913-2093001 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012225_7 2242548-2242649 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012225_8 2493169-2493265 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012225_9 2922985-2923084 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 CP011998 Ralstonia solanacearum strain YC45 plasmid, complete sequence 1067753-1067776 2 0.917
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 MN694092 Marine virus AFVG_250M12, complete genome 35642-35665 2 0.917
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NC_048682 Raoultella phage Ro1, complete genome 49049-49072 2 0.917
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 MT178275 Klebsiella virus KpS8, complete genome 92948-92971 2 0.917
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NC_048647 UNVERIFIED: Klebsiella phage KNP2 genomic sequence 84347-84370 2 0.917
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 MT939253 Klebsiella phage vB_KpnM_Seu621, complete genome 92912-92935 2 0.917
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 MK024806 Proteus phage Mydo, complete genome 60151-60174 2 0.917
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 KX452695 UNVERIFIED: Klebsiella phage KPN2 genomic sequence 84347-84370 2 0.917
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NC_048656 Klebsiella phage vB_KpnM_BIS47, complete genome 79216-79239 2 0.917
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NC_028659 Klebsiella phage vB_KpnM_KB57, complete genome 93185-93208 2 0.917
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP016613 Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence 1611166-1611189 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 CP023013 Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence 1026531-1026554 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 916119-916142 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 916161-916184 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP049788 Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence 941759-941782 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP016009 Escherichia coli strain NGF1 plasmid pNGF1_pCol_let_like, complete sequence 4268-4291 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022766 Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence 1100776-1100799 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP016555 Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence 777128-777151 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052069 Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence 1019755-1019778 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP016905 Ralstonia solanacearum strain KACC 10709 plasmid unnamed1 7507-7530 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022769 Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence 1108527-1108550 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NC_002487 Escherichia coli plasmid pCol-let, complete sequence 2202-2225 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022773 Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence 823381-823404 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022783 Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence 1032164-1032187 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022791 Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence 934214-934237 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 915216-915239 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 915258-915281 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 920694-920717 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 920730-920753 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 920684-920707 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 920720-920743 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022795 Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence 1028865-1028888 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052071 Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence 1140230-1140253 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 916111-916134 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 916153-916176 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 916129-916152 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 916183-916206 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 916102-916125 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 916144-916167 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 CP023015 Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence 960522-960545 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022779 Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence 1108516-1108539 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052075 Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence 1140197-1140220 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052105 Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence 1139020-1139043 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052077 Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence 992306-992329 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052115 Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence 1139033-1139056 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052079 Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence 992329-992352 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052107 Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence 1139033-1139056 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022781 Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence 935475-935498 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052117 Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence 1139022-1139045 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052125 Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence 992329-992352 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022793 Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence 1031318-1031341 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022785 Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence 1011992-1012015 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022787 Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence 1059939-1059962 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP022756 Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence 1106095-1106118 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052121 Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence 1139022-1139045 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052123 Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence 992329-992352 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052073 Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence 1140196-1140219 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052081 Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence 992329-992352 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052083 Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence 992329-992352 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052109 Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence 1139033-1139056 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052103 Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence 1139044-1139067 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP052119 Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence 1139022-1139045 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 NZ_CP019193 Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence 95075-95098 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 MN694424 Marine virus AFVG_250M468, complete genome 20247-20270 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 MN693528 Marine virus AFVG_25M160, complete genome 6188-6211 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 MN693259 Marine virus AFVG_25M161, complete genome 6178-6201 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 MN693217 Marine virus AFVG_25M350, complete genome 27839-27862 3 0.875
NC_012225_3 3.4|1412797|24|NC_012225|CRISPRCasFinder 1412797-1412820 24 MN694307 Marine virus AFVG_250M453, complete genome 33729-33752 3 0.875
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_CP011351 Bacillus thuringiensis strain YC-10 plasmid pYC3, complete sequence 72740-72767 4 0.857
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_CP004874 Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB74, complete sequence 60338-60365 4 0.857
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_CP015154 Bacillus thuringiensis strain Bc601 plasmid pBTBC4, complete sequence 12672-12699 4 0.857
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_CP013059 Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-4, complete sequence 16082-16109 4 0.857
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_MG710485 Bacillus thuringiensis serovar israelensis strain Bti-UFT6.51 plasmid pBtiUFT6.51.1 complete sequence 60248-60275 4 0.857
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_CP013615 Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence 206494-206521 5 0.821
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_CP045536 Bacillaceae bacterium C02 plasmid unnamed3, complete sequence 4151-4178 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 CP045772 Bacillus paranthracis strain CFSAN068816 plasmid p5CFSAN068816, complete sequence 1741-1768 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_018494 Bacillus cereus FRI-35 plasmid p04, complete sequence 264-291 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_CP033791 Bacillus sp. FDAARGOS_527 plasmid unnamed4, complete sequence 5134-5161 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 AP013754 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C20-MedDCM-OCT-S24-C67, *** SEQUENCING IN PROGRESS *** 9386-9413 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_019005 Borrelia burgdorferi 297 plasmid 297_cp32-6, complete sequence 14729-14756 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_CP016363 Bacillus cereus strain M13 plasmid pBCM1303, complete sequence 2736-2763 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_018979 Borrelia burgdorferi 297 plasmid 297_cp32-12, complete sequence 14678-14705 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_018980 Borrelia burgdorferi 297 plasmid 297_cp32-7, complete sequence 6213-6240 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_018981 Borrelia burgdorferi 297 plasmid 297_cp32-5, complete sequence 14671-14698 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_018984 Borrelia burgdorferi 297 plasmid 297_cp32-4, complete sequence 14437-14464 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_019003 Borrelia burgdorferi 297 plasmid 297_cp32-1, complete sequence 14671-14698 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_019004 Borrelia burgdorferi 297 plasmid 297_cp32-11, complete sequence 14679-14706 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_019006 Borrelia burgdorferi 297 plasmid 297_cp32-3, complete sequence 14689-14716 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_017427 Borreliella burgdorferi JD1 plasmid JD1 cp32-3, complete sequence 14700-14727 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_017393 Borreliella burgdorferi JD1 plasmid JD1 cp32-11, complete sequence 14733-14760 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_017394 Borreliella burgdorferi JD1 plasmid JD1 cp32-1+5, complete sequence 14120-14147 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_017396 Borreliella burgdorferi JD1 plasmid JD1 cp32-12, complete sequence 14726-14753 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_017397 Borreliella burgdorferi JD1 plasmid JD1 cp32-9, complete sequence 14700-14727 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_017425 Borreliella burgdorferi JD1 plasmid JD1 cp32-6, complete sequence 14700-14727 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_017426 Borreliella burgdorferi JD1 plasmid JD1 cp32-8, complete sequence 14700-14727 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_016774 Bacillus cereus NC7401 plasmid pNC4, complete sequence 626-653 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_011776 Bacillus cereus AH820 plasmid pAH820_3, complete sequence 1052-1079 6 0.786
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NC_011657 Bacillus cereus AH187 plasmid pAH187_3, complete sequence 1052-1079 6 0.786
NC_012225_3 3.2|1412698|33|NC_012225|CRISPRCasFinder 1412698-1412730 33 AP014494 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces 28383-28415 7 0.788
NC_012225_4 4.1|1623299|31|NC_012225|PILER-CR 1623299-1623329 31 CP002510 Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28, complete sequence 65362-65392 7 0.774
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_CP013238 Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence 78775-78802 7 0.75
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 427199-427226 7 0.75
NC_012225_4 4.1|1623299|31|NC_012225|PILER-CR 1623299-1623329 31 MN694288 Marine virus AFVG_250M340, complete genome 24513-24543 8 0.742
NC_012225_4 4.1|1623299|31|NC_012225|PILER-CR 1623299-1623329 31 MN694316 Marine virus AFVG_250M341, complete genome 16491-16521 8 0.742
NC_012225_4 4.1|1623299|31|NC_012225|PILER-CR 1623299-1623329 31 MN694631 Marine virus AFVG_250M342, complete genome 16149-16179 8 0.742
NC_012225_4 4.2|1623371|28|NC_012225|PILER-CR 1623371-1623398 28 MN693323 Marine virus AFVG_25M87, complete genome 34159-34186 8 0.714

1. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 2, identity: 0.917

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggcagaggca	Protospacer
.********** ************

2. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to MN694092 (Marine virus AFVG_250M12, complete genome) position: , mismatch: 2, identity: 0.917

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagcagaggcagaggct	Protospacer
*********** *********** 

3. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NC_048682 (Raoultella phage Ro1, complete genome) position: , mismatch: 2, identity: 0.917

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagctgaggaagagaca	Protospacer
**************** ****.**

4. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to MT178275 (Klebsiella virus KpS8, complete genome) position: , mismatch: 2, identity: 0.917

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagctgaggaagagaca	Protospacer
**************** ****.**

5. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NC_048647 (UNVERIFIED: Klebsiella phage KNP2 genomic sequence) position: , mismatch: 2, identity: 0.917

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagctgaggaagagaca	Protospacer
**************** ****.**

6. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to MT939253 (Klebsiella phage vB_KpnM_Seu621, complete genome) position: , mismatch: 2, identity: 0.917

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagctgaggaagagaca	Protospacer
**************** ****.**

7. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to MK024806 (Proteus phage Mydo, complete genome) position: , mismatch: 2, identity: 0.917

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagctgaggaagagaca	Protospacer
**************** ****.**

8. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to KX452695 (UNVERIFIED: Klebsiella phage KPN2 genomic sequence) position: , mismatch: 2, identity: 0.917

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagctgaggaagagaca	Protospacer
**************** ****.**

9. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NC_048656 (Klebsiella phage vB_KpnM_BIS47, complete genome) position: , mismatch: 2, identity: 0.917

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagctgaggaagagaca	Protospacer
**************** ****.**

10. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NC_028659 (Klebsiella phage vB_KpnM_KB57, complete genome) position: , mismatch: 2, identity: 0.917

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagctgaggaagagaca	Protospacer
**************** ****.**

11. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

12. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

13. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

14. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

15. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

16. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP016009 (Escherichia coli strain NGF1 plasmid pNGF1_pCol_let_like, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagctgatgcaaaggcg	Protospacer
************** ***.****.

17. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

18. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

19. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

20. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

21. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

22. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NC_002487 (Escherichia coli plasmid pCol-let, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcaaaagctgatgcaaaggcg	Protospacer
************** ***.****.

23. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

24. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

25. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

26. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

27. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

28. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

29. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

30. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

31. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

32. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

33. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

34. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

35. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

36. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

37. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

38. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

39. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

40. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

41. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

42. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

43. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

44. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

45. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

46. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

47. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

48. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

49. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

50. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

51. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

52. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

53. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

54. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

55. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

56. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

57. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

58. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

59. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcagaagcagaggcagaggca	Protospacer
.*****.**** ************

60. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

61. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

62. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagcaaaagcagaggtagaggca	Protospacer
.********** ****.*******

63. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to NZ_CP019193 (Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagcgaaagctgaggcagaagcc	Protospacer
*****.**************.** 

64. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to MN694424 (Marine virus AFVG_250M468, complete genome) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagctaaagcagaggcagaggcc	Protospacer
***** ***** *********** 

65. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to MN693528 (Marine virus AFVG_25M160, complete genome) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagaaaaagctgaggcagaagca	Protospacer
.*** ***************.***

66. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to MN693259 (Marine virus AFVG_25M161, complete genome) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagaaaaagctgaggcagaagca	Protospacer
.*** ***************.***

67. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to MN693217 (Marine virus AFVG_25M350, complete genome) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
gaagaaaaagctgaggcagaagca	Protospacer
.*** ***************.***

68. spacer 3.4|1412797|24|NC_012225|CRISPRCasFinder matches to MN694307 (Marine virus AFVG_250M453, complete genome) position: , mismatch: 3, identity: 0.875

aaagcaaaagctgaggcagaggca	CRISPR spacer
aaagctaaagcagaggcagaggcc	Protospacer
***** ***** *********** 

69. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_CP011351 (Bacillus thuringiensis strain YC-10 plasmid pYC3, complete sequence) position: , mismatch: 4, identity: 0.857

ttatcatctttagataaagtattagaaa	CRISPR spacer
ttatcatctttagataatttattaaata	Protospacer
*****************  *****.* *

70. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_CP004874 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB74, complete sequence) position: , mismatch: 4, identity: 0.857

ttatcatctttagataaagtattagaaa	CRISPR spacer
ttatcatctttagataatttattaaata	Protospacer
*****************  *****.* *

71. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_CP015154 (Bacillus thuringiensis strain Bc601 plasmid pBTBC4, complete sequence) position: , mismatch: 4, identity: 0.857

ttatcatctttagataaagtattagaaa	CRISPR spacer
ttatcatctttagataatttattaaata	Protospacer
*****************  *****.* *

72. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_CP013059 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-4, complete sequence) position: , mismatch: 4, identity: 0.857

ttatcatctttagataaagtattagaaa	CRISPR spacer
ttatcatctttagataatttattaaata	Protospacer
*****************  *****.* *

73. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_MG710485 (Bacillus thuringiensis serovar israelensis strain Bti-UFT6.51 plasmid pBtiUFT6.51.1 complete sequence) position: , mismatch: 4, identity: 0.857

ttatcatctttagataaagtattagaaa	CRISPR spacer
ttatcatctttagataatttattaaata	Protospacer
*****************  *****.* *

74. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 5, identity: 0.821

ttatcatctttagataaagtattagaaa	CRISPR spacer
atatcaactttagataaaatattattaa	Protospacer
 ***** ***********.*****  **

75. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_CP045536 (Bacillaceae bacterium C02 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
atccaatctttagataaagaatttgaaa	Protospacer
 * . ************** *** ****

76. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to CP045772 (Bacillus paranthracis strain CFSAN068816 plasmid p5CFSAN068816, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
atccaatctttagataaagaatttgaaa	Protospacer
 * . ************** *** ****

77. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_018494 (Bacillus cereus FRI-35 plasmid p04, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
atccaatctttagataaagaatttgaaa	Protospacer
 * . ************** *** ****

78. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_CP033791 (Bacillus sp. FDAARGOS_527 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
atccaatctttagataaagaatttgaaa	Protospacer
 * . ************** *** ****

79. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to AP013754 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C20-MedDCM-OCT-S24-C67, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
acaggatttttagataaattattagaaa	Protospacer
 .*  **.********** *********

80. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_019005 (Borrelia burgdorferi 297 plasmid 297_cp32-6, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

81. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_CP016363 (Bacillus cereus strain M13 plasmid pBCM1303, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
atccaatctttagataaagaatttgaaa	Protospacer
 * . ************** *** ****

82. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_018979 (Borrelia burgdorferi 297 plasmid 297_cp32-12, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

83. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_018980 (Borrelia burgdorferi 297 plasmid 297_cp32-7, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

84. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_018981 (Borrelia burgdorferi 297 plasmid 297_cp32-5, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

85. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_018984 (Borrelia burgdorferi 297 plasmid 297_cp32-4, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

86. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_019003 (Borrelia burgdorferi 297 plasmid 297_cp32-1, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

87. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_019004 (Borrelia burgdorferi 297 plasmid 297_cp32-11, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

88. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_019006 (Borrelia burgdorferi 297 plasmid 297_cp32-3, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

89. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_017427 (Borreliella burgdorferi JD1 plasmid JD1 cp32-3, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

90. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_017393 (Borreliella burgdorferi JD1 plasmid JD1 cp32-11, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

91. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_017394 (Borreliella burgdorferi JD1 plasmid JD1 cp32-1+5, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

92. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_017396 (Borreliella burgdorferi JD1 plasmid JD1 cp32-12, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

93. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_017397 (Borreliella burgdorferi JD1 plasmid JD1 cp32-9, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

94. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_017425 (Borreliella burgdorferi JD1 plasmid JD1 cp32-6, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

95. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_017426 (Borreliella burgdorferi JD1 plasmid JD1 cp32-8, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
tagtcatctttagatagagtagtagatg	Protospacer
* .*************.**** **** .

96. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_016774 (Bacillus cereus NC7401 plasmid pNC4, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
atccaatctttagataaagaatttgaaa	Protospacer
 * . ************** *** ****

97. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_011776 (Bacillus cereus AH820 plasmid pAH820_3, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
atccaatctttagataaagaatttgaaa	Protospacer
 * . ************** *** ****

98. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NC_011657 (Bacillus cereus AH187 plasmid pAH187_3, complete sequence) position: , mismatch: 6, identity: 0.786

ttatcatctttagataaagtattagaaa	CRISPR spacer
atccaatctttagataaagaatttgaaa	Protospacer
 * . ************** *** ****

99. spacer 3.2|1412698|33|NC_012225|CRISPRCasFinder matches to AP014494 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 7, identity: 0.788

gctgctgaaagagctgccgctgctgctaaagca	CRISPR spacer
actgctgtaagtgctgccgctgctgcttataaa	Protospacer
.****** *** *************** * . *

100. spacer 4.1|1623299|31|NC_012225|PILER-CR matches to CP002510 (Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28, complete sequence) position: , mismatch: 7, identity: 0.774

-gatgtactagaagacggcggagaaacaattc	CRISPR spacer
ccata-accagaagacggcggagaaagaaatg	Protospacer
  **. **.***************** ** * 

101. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 7, identity: 0.75

ttatcatctttagataaagtattagaaa	CRISPR spacer
aataaaactttagataaagtaatagaaa	Protospacer
     * ************** ******

102. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.75

ttatcatctttagataaagtattagaaa	CRISPR spacer
agctcttctatagataaagtattagatc	Protospacer
   ** *** ****************  

103. spacer 4.1|1623299|31|NC_012225|PILER-CR matches to MN694288 (Marine virus AFVG_250M340, complete genome) position: , mismatch: 8, identity: 0.742

gatgtactagaagacggcggagaaacaattc	CRISPR spacer
gatgtagtagaagaaggcggagaagccgcag	Protospacer
****** ******* *********.* ..  

104. spacer 4.1|1623299|31|NC_012225|PILER-CR matches to MN694316 (Marine virus AFVG_250M341, complete genome) position: , mismatch: 8, identity: 0.742

gatgtactagaagacggcggagaaacaattc	CRISPR spacer
gatgtagtagaagaaggcggagaagccgcag	Protospacer
****** ******* *********.* ..  

105. spacer 4.1|1623299|31|NC_012225|PILER-CR matches to MN694631 (Marine virus AFVG_250M342, complete genome) position: , mismatch: 8, identity: 0.742

gatgtactagaagacggcggagaaacaattc	CRISPR spacer
gatgtagtagaagaaggcggagaagccgcag	Protospacer
****** ******* *********.* ..  

106. spacer 4.2|1623371|28|NC_012225|PILER-CR matches to MN693323 (Marine virus AFVG_25M87, complete genome) position: , mismatch: 8, identity: 0.714

ttatcatctttagataaagtattagaaa	CRISPR spacer
cataaatctttagataatgtattagatt	Protospacer
.    ************ ********  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 83983 : 142967 54 Cafeteria_roenbergensis_virus(20.0%) tRNA,coat,transposase NA
DBSCAN-SWA_2 2350266 : 2358216 11 uncultured_virus(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage