CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_012847	Bartonella grahamii as4aup plasmid pBGR3, complete sequence	0 crisprs	NA	0	0	0	0
NC_012846	Bartonella grahamii as4aup, complete sequence	2 crisprs	cas3	3	1	9	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_012846_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_012846_1

1129280-1129466

Orphan

Consensus_repeat	Method
CGTAAACTTGCGCATTGCCATAAAC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NC_012846_1

>merge|NC_012846|1|1129280-1129466|CRISPRCasFinder
CGTAAACTTGTGCATTGCCATAAACTTCTGCATTATCAAAAATGTGCGGTTCACCGCAAATATATGCATCACCGTAAACTTCTGCATGACCGTAAATGCATGGTTCATCGAAAACTTCTGCTTTGTCATAAATACGAGAATTGTCGTAAACCTCGGCATAACCGTAAACATGTGCATTTTCGTAAAC

>NC_012846|1|1|1129280-1129466|CRISPRCasFinder
CGTAAACTTGTGCATTGCCATAAAC	TTCTGCATTATCAAAAATGTGCGGTTCAC
CGCAAATATATGCATCACCGTAAAC	TTCTGCATGACCGTAAATGCATGGTTCAT
CGAAAACTTCTGCTTTGTCATAAAT	ACGAGAATTGTCGTAAACCTCGGCATAAC
CGTAAACATGTGCATTTTCGTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_012846.1\|WP_015856317.1\|1131907_1132666_-\|phage-antirepressor-Ant	unknown	unknown	gnl\|CDD\|369825
NC_012846.1\|WP_015856321.1\|1134369_1135500_+\|YdaU-family-protein	unknown	unknown	gnl\|CDD\|369218
NC_012846.1\|WP_041581402.1\|1124807_1126268_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|181676
NC_012846.1\|WP_015856306.1\|1123574_1123829_+\|tail-protein-X	unknown	unknown	gnl\|CDD\|227337
NC_012846.1\|WP_015856311.1\|1128663_1129119_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223974
NC_012846.1\|WP_012754743.1\|1136052_1136400_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215421
NC_012846.1\|WP_015856313.1\|1129793_1130282_-\|DUF488-family-protein	unknown	unknown	gnl\|CDD\|227770
NC_012846.1\|WP_172607525.1\|1135522_1135870_+\|hypothetical-protein	unknown	unknown	unknown
NC_012846.1\|WP_015856320.1\|1133990_1134242_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|274805
NC_012846.1\|WP_004854509.1\|1126665_1126947_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|282822
NC_012846.1\|WP_015856310.1\|1127299_1128337_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271181
NC_012846.1\|WP_015856319.1\|1133263_1133881_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|119397
NC_012846.1\|WP_015856305.1\|1123116_1123578_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|377754
NC_012846.1\|WP_015856318.1\|1132730_1133105_-\|hypothetical-protein	unknown	unknown	unknown
NC_012846.1\|WP_004854238.1\|1137031_1137337_-\|BrnA-antitoxin-family-protein	unknown	unknown	gnl\|CDD\|373040
NC_012846.1\|WP_143711788.1\|1122702_1123029_+\|hypothetical-protein	unknown	unknown	unknown
NC_012846.1\|WP_015857131.1\|1128339_1128588_-\|hypothetical-protein	unknown	unknown	unknown
NC_012846.1\|WP_015856309.1\|1126962_1127262_+\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|274228
NC_012846.1\|WP_041581568.1\|1123828_1124851_+\|phage-late-control-protein	unknown	unknown	gnl\|CDD\|222877
NC_012846.1\|WP_015856314.1\|1130349_1130973_-\|YqaJ-viral-recombinase-family-protein	unknown	unknown	gnl\|CDD\|378216

Protein	Function_ID	Function_description	E-value
NC_012846.1\|WP_004854238.1\|1137031_1137337_-\|BrnA-antitoxin-family-protein	gnl\|CDD\|373040	pfam14384, BrnA_antitoxin, BrnA antitoxin of type II toxin-antitoxin system. BrnA is family of antitoxins that neutralizes the toxin BrnT, pfam04365. It consists of 3 alpha-helices and a C-terminal ribbon-helix-helix DNA binding domain. As in other toxin-antitoxin systems, BrnA negatively autoregulates the brnTA operon and has higher affinity for the DNA operator when complexed with BrnT. It dimerizes with two molecules of its toxin BrnT.	1.23524e-16
NC_012846.1\|WP_015856321.1\|1134369_1135500_+\|YdaU-family-protein	gnl\|CDD\|369218	pfam07120, DUF1376, Protein of unknown function (DUF1376). This family consists of several hypothetical bacterial proteins of around 95 residues in length. The function of this family is unknown.	1.41832e-17
NC_012846.1\|WP_041581402.1\|1124807_1126268_+\|replicative-DNA-helicase	gnl\|CDD\|181676	PRK09165, PRK09165, replicative DNA helicase; Provisional.	0
NC_012846.1\|WP_015856306.1\|1123574_1123829_+\|tail-protein-X	gnl\|CDD\|227337	COG5004, COG5004, P2-like prophage tail protein X [General function prediction only].	3.09647e-08
NC_012846.1\|WP_015856311.1\|1128663_1129119_-\|hypothetical-protein	gnl\|CDD\|223974	COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl].	3.11697e-06
NC_012846.1\|WP_012754743.1\|1136052_1136400_+\|hypothetical-protein	gnl\|CDD\|215421	PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II.	0.00329164
NC_012846.1\|WP_015856313.1\|1129793_1130282_-\|DUF488-family-protein	gnl\|CDD\|227770	COG5483, COG5483, Uncharacterized conserved protein [Function unknown].	1.18663e-29
NC_012846.1\|WP_015856320.1\|1133990_1134242_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|274805	TIGR03830, transcriptional_regulator_XRE_family, putative zinc finger/helix-turn-helix protein, YgiT family. This model describes a family of predicted regulatory proteins with a conserved zinc finger/HTH architecture. The amino-terminal region contains a novel domain, featuring two CXXC motifs and occuring in a number of small bacterial proteins as well as in the present family. The carboxyl-terminal region consists of a helix-turn-helix domain, modeled by pfam01381. The predicted function is DNA binding and transcriptional regulation.	1.1228e-05
NC_012846.1\|WP_004854509.1\|1126665_1126947_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|282822	pfam05015, HigB-like_toxin, RelE-like toxin of type II toxin-antitoxin system HigB. This family carries several different examples of type II bacterial toxins of toxin-antitoxin systems including many HigB-like ones. The fold is referred to as the RelE/YoeB/Txe/Yeeu fold suggesting all examples of these are present in this family. Several plasmids with proteic killer gene-systems have been reported. All of them encode a stable toxin and an unstable antidote. Upon loss of the plasmid, the less stable inhibitor is inactivated more rapidly than the toxin, allowing the toxin to be activated. The activation of these systems results in cell filamentation and cessation of viable cell production. It has been verified that both the stable killer and the unstable inhibitor of the systems are short polypeptides. This family corresponds to the toxin.	4.38658e-27
NC_012846.1\|WP_015856310.1\|1127299_1128337_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271181	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase. Lambda-type integrases catalyze site-specific integration and excision of temperate bacteriophages and other mobile genetic elements to and from the bacterial host chromosome. They are tyrosine-based site-specific recombinase and belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The phage lambda integrase can bridge two different and well-separated DNA sequences called arm- and core-sites. The C-terminal domain binds, cleaves and re-ligates DNA strands at the core-sites, while the N-terminal domain is largely responsible for high-affinity binding to the arm-type sites.	2.3518e-16
NC_012846.1\|WP_015856319.1\|1133263_1133881_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	7.42807e-12
NC_012846.1\|WP_015856314.1\|1130349_1130973_-\|YqaJ-viral-recombinase-family-protein	gnl\|CDD\|378216	pfam09588, YqaJ, YqaJ-like viral recombinase domain. This protein family is found in many different bacterial species but is of viral origin. The protein forms an oligomer and functions as a processive alkaline exonuclease that digests linear double-stranded DNA in a Mg(2+)-dependent reaction, It has a preference for 5'-phosphorylated DNA ends. It thus forms part of the two-component SynExo viral recombinase functional unit.	3.78259e-28
NC_012846.1\|WP_015856309.1\|1126962_1127262_+\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|274228	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family. Members of this family form a distinct clade within the larger family HTH_3 of helix-turn-helix proteins, described by pfam01381. Members of this clade are strictly bacterial and nearly always shorter than 110 amino acids. This family includes the characterized member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is uncoded by the upstream member of the gene pair. [Regulatory functions, DNA interactions, Regulatory functions, Protein interactions, Mobile and extrachromosomal element functions, Other].	4.00807e-35
NC_012846.1\|WP_015856317.1\|1131907_1132666_-\|phage-antirepressor-Ant	gnl\|CDD\|369825	pfam08346, AntA, AntA/AntB antirepressor. In E. coli the two proteins AntA and AntB have 62% amino acid identities near their N termini. AntA appears to be encoded by a truncated and divergent copy of AntB. The two proteins are homologous to putative antirepressors found in numerous bacteriophages, such as the hypothetical antirepressor protein encoded by the gene LO142 of the bacteriophage 933W.	1.62131e-32
NC_012846.1\|WP_041581568.1\|1123828_1124851_+\|phage-late-control-protein	gnl\|CDD\|222877	PHA02561, D, tail protein; Provisional.	4.5597e-64
NC_012846.1\|WP_015856305.1\|1123116_1123578_+\|phage-tail-protein	gnl\|CDD\|377754	pfam06995, Phage_P2_GpU, Phage P2 GpU. This family consists of several bacterial and phage proteins of around 130 residues in length which seem to be related to the bacteriophage P2 GpU protein, which is thought to be involved in tail assembly.	5.22328e-23

>NC_012846.1|WP_015856311.1|1128663_1129119_-|hypothetical-protein
MRKYELTDETIEFDGYITLYRIRALKDFGDVKAGDLGGFIEHEDNLSHENDCWIYNDAKAYLFANIYDSAKVFDNAQVAYNAEIFGNAKIYNNVKIYGGHIFGSVEIYGNVVIDNDSRIYGDTKIYDNSEACKRTMTAQNGDSSAKDDIPF
>NC_012846.1|WP_015857131.1|1128339_1128588_-|hypothetical-protein
MPHRPPTITQPAIARALREAKKQGCELIEIKPTGELLIHINKTITPTTTDNTYSIDDFPPLENEQEDYETSKSCPSVDGIKF
>NC_012846.1|WP_015856310.1|1127299_1128337_-|tyrosine-type-recombinase/integrase
MPKRRPPHLVRERTRHGKVIWYVRIGHGPRFRIEGTYGTQEFVDNYTLAIKQAQNGSSKTKRRTRLTEGSFDWLLHQYLQSMQWHNQSESTKKVKYRILNNVSKHIGDRAYKSINKQHILEAVDRRRETPAAAKHFLTSLNGLFNWAVDNALLNRNPAFNIKAPKSLNSEGLLPWREEDIDKYYHRWSHGTHERVWIDVLLYTGLRRGDAVRIGWKDVKDNIIYLKTEKSQFKTDVFLPILPELEETLKIGPIGNETFICGKGGNKLVKESFGNLFREACNAAGIKKSAHGLRKLAATRAANAGATVSQMKALFGWTEDKMASLYTKTADRKRLAIEAIKKLQKS
>NC_012846.1|WP_015856309.1|1126962_1127262_+|HigA-family-addiction-module-antidote-protein
MMHNPAHPGEVLKVAFLEEMGITIQKLADHLHMTRASLSRVINGHASMSTELAVKLELAGFSKAKFWLDMQTNYNLWQTMQQTQPPISPLVSDSPQTSL
>NC_012846.1|WP_004854509.1|1126665_1126947_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MAIVSFKHKGLKLFYTTGSTKAIRSDHVKKLRVILTALTSATTPEMLKAPAFKMHPLKGELTGYYSIWVNGNWRVTFRFIGTDVELVDYQDYH
>NC_012846.1|WP_041581402.1|1124807_1126268_+|replicative-DNA-helicase
MRTSNMLKTENPRDNFASSFRQLPHNIEAEQALLGAIIINNNALDRVSDFLKAEHFFEPLHQKLFDIISKIIQNGKVADPITIKPFVDNDEKIADITVYNYVVRLATEAVTIINTKDYGSVIYDLFIRRSLINLGTQVVNRAYDASVELTTSQQIETVENQLFELAEKGKYGGGFENFNTAITKALNMASAAKKRSSRLSGIATHIKILDEKMGGLQASDLIILAGRPAMGKTSLATNIAFNIANACKRDNSQVNEGGIVGFFSLEMSSEQLATRIISEQIKVSSSDMRRGNISEEQFAKIIHAMRSLQTIPLYIDQTGGVSLAQLSARARRLKRQHGLDVLIIDYIQLMTSGSKRSLENRVQEITAITTGLKALAKELNIPIIALSQLSRQVENRTDKRPQLSDLRESGSIEQDADIVLFVYREEYYLKNEEPKEGTAEYSKWQEAMEQAKGKAEVIIAKQRHGPTGIVPLAFQSDFTRFSDLEK
>NC_012846.1|WP_041581568.1|1123828_1124851_+|phage-late-control-protein
MRTYPFIVVKVGDKPVHEVFYQRLLTATITDHAGNEADTFEAEFDDSGNDLEVPSSNSALQVIFGYENSISAFMGRFVVESVVSCGGSDGEILRLCGKSASMRKELKEQVSEHFDHKTVGEIVETLAKRHGYQAKVSPQFTKQTLPYVIRTDQSAVDFLTRLADRMRARFLIKDNKFLFLSGDNLPALAIHKHDCSNWEFTLEPRTQYGTIEASYFDRSKGQQCHIKHQTGVSGPVRRLRTCYTCEEEARAAAASESDRLCHAVGSGSLTLAGRPEIMADQPLLLQGFRGEINGPWKASTVTHCYEKQSGYTTEITLEAPNKGKESNENIKHAKNRESKR
>NC_012846.1|WP_015856306.1|1123574_1123829_+|tail-protein-X
MKIPEKHVVVELEDMSLDLICFHHAMAVFRDRIQVGALNGYLEATLEANPEIAKYGVLLPRGLTVILPEFVLSNPQSMVKRLWD
>NC_012846.1|WP_015856305.1|1123116_1123578_+|phage-tail-protein
MRDPLMMLGPHQFYVDWLNFQSFEEEFSASWVCMERFGRSPSLQFTGYGNDAKTIHGVWFPEEFGDRVAIDAITTTIKRAKPVQMLRWINDTTYSVLLHGPVVITSITKDHDYISCSGQSQRIRYSITLLPFFNGGKPQGQYQVGQYQVGQTP
>NC_012846.1|WP_143711788.1|1122702_1123029_+|hypothetical-protein
MGTISQLTDFCKSLPHRMKGWFGSINLREFLPSFLGGTTAIQPIAQFAGVGHANYSVREQREKDHSTITHNQNVTVHVNGARDPVATGRAVAHAIQRARANALHGGTE
>NC_012846.1|WP_015856313.1|1129793_1130282_-|DUF488-family-protein
MCNTKHIIIQPAKDEEFCFFTIGYEGRSLENYLSCLIENNIKTLCDVRKNPISRKQGFSKRQLEQAVSNIDIEYMHMPELGITSEKRRNLKTQKDYDRLFEDYQNTTLKNNSCAINKLYQIFLNKKRVAITCFEANVCMCHRGQLALALTQLPDWKYEIEHI
>NC_012846.1|WP_015856314.1|1130349_1130973_-|YqaJ-viral-recombinase-family-protein
MKQRTAEWFQARLGKVTASNVYNVLSKTAKGLPTSKYEDYKTKLMIERLIEGISQSYTTPAMQWGIEHEENALREYEFIYDTEVTRCGFIPHPKMKMAGASPDGFIGEDGLIEVKCPQSTTHLRFFMYDEIKPEYIAQMQFQMACTGRKWCDFISYNPNFVGKSTGLRMKVKRVNRDEKHIEEINKAVEIFLGEIEQEMQKILAKAA
>NC_012846.1|WP_015856317.1|1131907_1132666_-|phage-antirepressor-Ant
MEKPIAIQQNTIKHETVQTVNARELHAFLEIGKDFSTWIKDRIHQYEFEEGNDFIKTQDLRSPKLGSAKSRAVTAIDYHLTLDMAKELAMVERNEKGKQARQYFIECERRAKKPLDLANALEDPQFVKKLLLESVTQLETLKSEVSTLKPKAMALESLQRHNGLFGLTEAAKILEMQPKQFILFLQKKGWVYRRAAGGNLLPYQDKIQKKLMDCPTITLQTASGIEKVIPCAKITAKGIGVLSQELKRQSMH
>NC_012846.1|WP_015856318.1|1132730_1133105_-|hypothetical-protein
MENPILINSNEILLVVYNDDQNIGRSGPLDESQVLKIIDEADDAIQIFRINPSENNCEDISEEIADAYVEANIEHLHEDSKVHYFVRESDAYHDLLSDLAKEKYNDEIYGTYEQQHRLRPCDVL
>NC_012846.1|WP_015856319.1|1133263_1133881_-|helix-turn-helix-domain-containing-protein
MSNKSNIISTLKKILTEFNLTQEDVAKRLNVTQASVSKWLKDSDPRGSNRDAILELYKELKGDNHFTTFVPLMGYIGAGTQIDPSFEQIPEDGLEQVEIPFALPDDMVAFEVKGDSMIPAYKDGDMVIVRRRQIKTIESFFGKEAVILTHDNKRYIKQISRGMNGEIDLLSWNALPIKNVKIVWVGEIFAILPISSYSKMIRTYR
>NC_012846.1|WP_015856320.1|1133990_1134242_+|helix-turn-helix-domain-containing-protein
MDQREDFKNLTKSIRGKFNWTQSEMAKMLGVTQAAVCKWEKRGSISVINYLKLQKLKDSSSSSSAFIAAHTDNDERQQQHSHS
>NC_012846.1|WP_015856321.1|1134369_1135500_+|YdaU-family-protein
MSNGMPWIRFHLYDWISGTNGMTSEQRGVYITLLVCMYEKKEPLKTDFQTLARVCHCSQKKFAAIVEYLMRNDKLVETDNGLWNTRVEEELNDFADKKEHISQVRSEAGKKGAQAKNNTKQHVNNFAEANDKQNEANAKQNQAIKNKNKNIYKKTKTIVLAKKEIDFEDLETIDLVDEPTEVAAVETTSEQIESSSDNKPPIHEQENVSKKAKRAQANRGCRLPADFEPDYDFAIEEGLPPERVKVEIAKFRDYWTAKSGKDATKIDWQATWRNWVRRAIEGLEKTKNTNNNGGNNGNFSKDQRTRGGTGETIRNLIGATQLSDASTRYHATDREMCNSGVPMDLEKWHSIDKNPRETSFRSLSDCSKLTYLESVC
>NC_012846.1|WP_172607525.1|1135522_1135870_+|hypothetical-protein
MLEGGLTMQKVSNVEARAKAYIAALNGISLWSLLQAVKNLIRGEAKGMSTTFVPSCADLAQYCRDLESRLYGVAEKVFIAVENTRNLALGGKRISFLRIGKPSEEQHNSSNSKAA
>NC_012846.1|WP_012754743.1|1136052_1136400_+|hypothetical-protein
MRILKDLFLKKRKQPMQKEFVATAVGYVPWGDGAEEYFYNLYEYEDGTRECEKFDGGQYYTTPENADFSTKAQVKAWVYGGAIPKSVLNYEPLIDEINKEIKKLSKTAGNKYVYR
>NC_012846.1|WP_004854238.1|1137031_1137337_-|BrnA-antitoxin-family-protein
MKKKVRYEIDVGNLSPLTDKQKVEVDKLAAMPDSAIDHSDIPTLDDAFWKNAVRNPFYKPTKTVTTVRVDSDVLAWLKSQGKGYQTRINAILRDAMLRSMR

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Crispr_ID: NC_012846_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_012846_2

2141888-2141979

Orphan

Consensus_repeat	Method
GTTCCAGCCAAAGCACCAAATGCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_012846_2

>merge|NC_012846|2|2141888-2141979|CRISPRCasFinder
GTTCCAGCCAAAGCACCAAATGCTGCACCGGTAAGTGCTGCTCCAGGAGTACTTCCAGCAATAGCAGTTCCAGCCAAAGCACCAATTGCTGC

>NC_012846|2|2|2141888-2141979|CRISPRCasFinder
GTTCCAGCCAAAGCACCAAATGCTGC	ACCGGTAAGTGCTGCTCCAGGAGTACTTCCAGCAATAGCA
GTTCCAGCCAAAGCACCAATTGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_012846.1\|WP_005774555.1\|2151496_2151676_-\|50S-ribosomal-protein-L32	unknown	unknown	gnl\|CDD\|223410
NC_012846.1\|WP_015856973.1\|2142187_2142823_-\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|224480
NC_012846.1\|WP_015856975.1\|2144864_2145776_-\|RNA-polymerase-factor-sigma-32	unknown	unknown	gnl\|CDD\|236033
NC_012846.1\|WP_015856968.1\|2135734_2137171_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|180487
NC_012846.1\|WP_015856977.1\|2147957_2148299_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|378771
NC_012846.1\|WP_015856979.1\|2152102_2153005_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NC_012846.1\|WP_015856974.1\|2142970_2144548_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|227123
NC_012846.1\|WP_015856965.1\|2130059_2131067_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135
NC_012846.1\|WP_015856971.1\|2139835_2141698_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NC_012846.1\|WP_005774567.1\|2137919_2138180_+\|DUF2312-domain-containing-protein	unknown	unknown	gnl\|CDD\|237474
NC_012846.1\|WP_015856981.1\|2157271_2158513_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|234737
NC_012846.1\|WP_005774573.1\|2133588_2133864_+\|DUF4164-domain-containing-protein	unknown	unknown	gnl\|CDD\|372702
NC_012846.1\|WP_015856978.1\|2148603_2149188_+\|CarD-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224248
NC_012846.1\|WP_015856964.1\|2128351_2129545_-\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NC_012846.1\|WP_015856966.1\|2131247_2133254_-\|transketolase	unknown	unknown	gnl\|CDD\|223100
NC_012846.1\|WP_026500753.1\|2138715_2139279_-\|ribosomal-protein-S5-alanine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182749
NC_012846.1\|WP_026500754.1\|2137167_2137656_-\|DUF1036-domain-containing-protein	unknown	unknown	gnl\|CDD\|227767
NC_012846.1\|WP_015856967.1\|2133876_2134260_+\|cell-division-protein-ZapA	unknown	unknown	gnl\|CDD\|377476
NC_012846.1\|WP_015856980.1\|2155779_2156931_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NC_012846.1\|WP_034452305.1\|2146355_2147936_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_012846.1\|WP_005774555.1\|2151496_2151676_-\|50S-ribosomal-protein-L32	gnl\|CDD\|223410	COG0333, RpmF, Ribosomal protein L32 [Translation, ribosomal structure and biogenesis].	1.61988e-21
NC_012846.1\|WP_015856973.1\|2142187_2142823_-\|thiamine-diphosphokinase	gnl\|CDD\|224480	COG1564, THI80, Thiamine pyrophosphokinase [Coenzyme metabolism].	4.25048e-62
NC_012846.1\|WP_015856975.1\|2144864_2145776_-\|RNA-polymerase-factor-sigma-32	gnl\|CDD\|236033	PRK07500, rpoH2, RNA polymerase factor sigma-32; Reviewed.	4.04855e-173
NC_012846.1\|WP_015856968.1\|2135734_2137171_-\|pyruvate-kinase	gnl\|CDD\|180487	PRK06247, PRK06247, pyruvate kinase; Provisional.	0
NC_012846.1\|WP_015856977.1\|2147957_2148299_+\|ferredoxin-family-protein	gnl\|CDD\|378771	pfam11953, DUF3470, Domain of unknown function (DUF3470). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 50 amino acids in length. This domain is found associated with pfam00037. This domain has a single completely conserved residue N that may be functionally important.	3.39414e-19
NC_012846.1\|WP_015856979.1\|2152102_2153005_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	1.68844e-82
NC_012846.1\|WP_015856974.1\|2142970_2144548_+\|M48-family-metalloprotease	gnl\|CDD\|227123	COG4784, COG4784, Putative Zn-dependent protease [General function prediction only].	2.74417e-167
NC_012846.1\|WP_015856965.1\|2130059_2131067_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	0
NC_012846.1\|WP_015856971.1\|2139835_2141698_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	4.65228e-161
NC_012846.1\|WP_005774567.1\|2137919_2138180_+\|DUF2312-domain-containing-protein	gnl\|CDD\|237474	PRK13694, PRK13694, hypothetical protein; Provisional.	7.35817e-36
NC_012846.1\|WP_015856981.1\|2157271_2158513_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|234737	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.	0
NC_012846.1\|WP_005774573.1\|2133588_2133864_+\|DUF4164-domain-containing-protein	gnl\|CDD\|372702	pfam13747, DUF4164, Domain of unknown function (DUF4164). This is a family of short, approx 100 residue-long, bacterial proteins of unknown function. There is several conserved LE/LD sequence pairs.	1.43891e-13
NC_012846.1\|WP_015856978.1\|2148603_2149188_+\|CarD-family-transcriptional-regulator	gnl\|CDD\|224248	COG1329, COG1329, Transcriptional regulators, similar to M. xanthus CarD [Transcription].	4.12973e-67
NC_012846.1\|WP_015856964.1\|2128351_2129545_-\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NC_012846.1\|WP_015856966.1\|2131247_2133254_-\|transketolase	gnl\|CDD\|223100	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism].	0
NC_012846.1\|WP_026500753.1\|2138715_2139279_-\|ribosomal-protein-S5-alanine-N-acetyltransferase	gnl\|CDD\|182749	PRK10809, PRK10809, 30S ribosomal protein S5 alanine N-acetyltransferase.	1.39275e-63
NC_012846.1\|WP_026500754.1\|2137167_2137656_-\|DUF1036-domain-containing-protein	gnl\|CDD\|227767	COG5480, COG5480, Predicted integral membrane protein [Function unknown].	1.37736e-54
NC_012846.1\|WP_015856967.1\|2133876_2134260_+\|cell-division-protein-ZapA	gnl\|CDD\|377476	pfam05164, ZapA, Cell division protein ZapA. ZapA is a cell division protein which interacts with FtsZ. FtsZ is part of a mid-cell cytokinetic structure termed the Z-ring that recruits a hierarchy of fission related proteins early in the bacterial cell cycle. The interaction of FtsZ with ZapA drives its polymerization and promotes FtsZ filament bundling thereby contributing to the spatio-temporal tuning of the Z-ring.	1.35581e-17
NC_012846.1\|WP_015856980.1\|2155779_2156931_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.7157e-12

>NC_012846.1|WP_015856971.1|2139835_2141698_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MAAPLLRLDRIFLNFGKTPLLNQACLSVEQGARIALVGRNGCGKSTLLKIAAGILEPHGGEIFRHPRVTLRYVSQNPDCSGFEDINAYMEAGLDDISDVQWINTLRTNLGFSGAEKLETLSGGEKRRVSLLQAIAAKPDILFLDEPTNHLDLPTIEWLEAVLSSLRSAIVVISHDRRFLENVTRSTVWLDRGTTKRLEKRFSEFESWRDKALQEEAIEQHKLGRQIAREEQWLRYGVSARRKRNVRRLGELKNLRQRHQTYKGQPGNALLTVAKSHESGQLVLEAKKISKSYGDRIIVKDFSLRIQRGDRIGLVGPNGIGKTTLLSALIGQEAVDSGTVRHGYNLSMALLDQQRILNEEETLAHYLTGGRGDTLVINGLERHVVSYMKDFLFLPEQARTPLKEFSGGERARLMLARLLSRPANFLILDEPTNDLDMETLDLLQEFIADFAGTVLLVSHDRDFLDRTVTHMLAPQGDGHWVLYAGGYSDMMVQNQHALSLQRKKTELSQRKAPSKSHVGELSKQDSSTDHSLIVREKKTRGKLSYKQVYALERLPEEIAVLQNEIKKIEQELSDPTLYRSDKERFERLSTALEKKKNTCTQKEEEWLELEILREEMEACSR
>NC_012846.1|WP_026500753.1|2138715_2139279_-|ribosomal-protein-S5-alanine-N-acetyltransferase
MAIKTKRTISTLICLEDAAELSSYYLRNANHLRPFEPVRSDGYHSLTAWETRANAFAYESAQGQAYRYAVRLKNEKTVIGVVNFTNVVRGVFQACHLGFSLDEKQQGKGLMFESLSALIRHIFHVYHLHRVMANYRPENIKSERLLKRLHFEKEGYAKDYLMISGKWRDHVLTSRINDLYESVNRFE
>NC_012846.1|WP_005774567.1|2137919_2138180_+|DUF2312-domain-containing-protein
MNDTVTDQTHAISVNQLRSFIERIERLEEEKKTISDDIKDVYTELKGSGFDSKAVRSIIRLRKKEEHERMEEEAIIELYKNALGMN
>NC_012846.1|WP_026500754.1|2137167_2137656_-|DUF1036-domain-containing-protein
MILKKRYWVFQKGLKVFLLSMLLLFPLVVFAKADFRVCNTTQQSVGVALGYRTFSGWVSEGWWTVPVTECKTLIEGPLASRFYYFYAEGAQKKGNWAGSVTMCVQDSQFTIQGVHDCFPRGYQKAEFKEIDTGNQTSWMIQLTDESLLNNSVVHSLSGNSPP
>NC_012846.1|WP_015856968.1|2135734_2137171_-|pyruvate-kinase
MKRARRVKIIATLGPSSFSSEMIEKLFRAGADVFRLNMSHTDRDMMVDLVKSIREVEKTVRRPIGILVDLQGPKLRVGRFTKGQEDLRVGQSFTLDNRDVSGDAQRVFFPHEDVFSAVKPGDRLLIDDGKLELRAQVCDGHSVQCRVVSGTRISDRKGVSFPDTILPFDSMTSKDKEDLQALLQQPVDWVALSFIQRPEDIIAVRRLTKSKVSLMAKIEKPQALEHIEKIIDVSDGIMIARGDLGVEMPLERVPALQMELIKACRLAGKPVVVATQMLESMISSPVPTRAEVSDVATAVYAGTDAVMLSAESASGRYPEEAVLMMDRIAQQIEQDHTYAAQVGAQHPAPESTGTDAISLAARQIAETLALSAIVAYTASGTTGVRASRERPNRPIIALSPIVETARRLALVWGLHCVVAQDARNLEDMVDRAAAIAFQEGFCKGGDRFLVTAGVPLGTPGATNLLRIASVSQDGTKGI
>NC_012846.1|WP_015856967.1|2133876_2134260_+|cell-division-protein-ZapA
METVSVTIDGKIYRMACDKGQEHRLIALAAQLDQYITHLKNNFGEIGDHRLSVMAGIMIIDEMEEIKRENKKLQEDYNALLRLHNERDRTMGKIMRDTTQRIENLTNQLLKDDQNSTNFQEQEQEDF
>NC_012846.1|WP_005774573.1|2133588_2133864_+|DUF4164-domain-containing-protein
MNQETTVLQDALEHLEKALRTLEITIINRNAVIDKNNEWEEEIQRMNADRSHLAQALDKAEAQIERLESVNKEVSKRLIKAMETIRVVIDR
>NC_012846.1|WP_015856966.1|2131247_2133254_-|transketolase
MTNTHQQNQMANAIRFLAIDAIEKANSGHPGLPMGAADIATVLYTQFLAHDPKNPRWPNRDRFVLSAGHGSMLLYALLYLSGYEDLSLEDLKNFRQVGSKLAGHPEYGHVAGIETTTGPLGQGLANAVGMALGERLQNARFGDLINHYTYALVGDGCLMEGISQEAISLAGHLKLNKLIVLWDDNNISIDGEISLADSTDQIARFKASGWETHKVNGHDQAAIARAIEAAQNSDKPTLIACKTTIGFGAPNKAGTNKAHGAPLGAREITETRIALGWEAEPFVIPADILDNWRLAGLNAAKRRQKWEAKFADLPVSERVEFERLMRGDLVGGFDGAIDTYKQKLVEERPVVATRKASEMALEVINEVVVETIGGSADLTGSNNTKSSQMKIISAEDFSGRYLHYGIREHAMGAVMNGLALYGGFIPYGGTFLCFSDYMRPAMRLSSLMGLRVIYVMTHDSIGLGEDGPTHQPVEHLACLRAMPNHLVFRPADAMETVECWQLALKARKTPSTLALSRQNLPLLRQEYEEENLCMLGAYEFLTASDDAQVTLFASGSELQIAVEAHAVLEEKGIPTRVVSVPCFELFSQQSLSYQRALIGDAPIKIAIEAAIRQGWDRFIGCDGVFIGMEGFGASGTIDALYAHFDITCENVVATVEKELGKIKEKKTK
>NC_012846.1|WP_015856965.1|2130059_2131067_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MTVRVAINGFGRIGRNILRALVESERKDIEVVAINDLGSVETNAHLLRYDSVHGRFPGTVKVVGDAIDVGSGLIKVCAERDPALLPWKDLDIDIALECTGIFTARDKASAHLDAGAKRVLVSAPSEGADLTVVYGVNHQYLSSEHRVVSNASCTTNCLAPVAQVLHNTVGIEKGFMTTIHSYTGDQPVLDTMHRDLYRARAAALSMIPTSTGAAKAVGLVLPELKGLLDGVSIRVPTPNVSVVDLTFTSKHSTTIEEINTAIAIAAQGPLKGVLDYTEEKLVSCDFNHNPHSAIFHNDQTKVIDGKLCRVLVWYDNEWGFSNRMSDTAVAFAKTI
>NC_012846.1|WP_015856964.1|2128351_2129545_-|phosphoglycerate-kinase
MGFRTLDDVDVTGKRVLVRVDFNVPMAQGKVCDTTRLERHKETLVELQKRGAKLILLSHCGRPKGKVEPEFSLRPVVQVLEKIINKPVSFAPDCIGSVVQVAVESLQNGGVLLLENVRFYAGEEKNDCSFAEALAHNGDLYVNDAFSVSHRAHASVEGITHLLPSYAGRSLQGEMQALEKGLGNPTHPVVAIVGGAKVSSKLFVLNHLVEKVDHLVIGGGMANSFLAAQGVSVGKSLCEHALMDTIKKIIKKAQECQCTLLLPQDAVVGFRFEKDAPHRLYDIEDIPQDGMILDIGTRSIAHINTVIDKAATLVWNGPLGVFEMSPFDKGTIAVARHAAERSLTGKLVSIAGGGDTVFALNHAGVANDFTYLSTAGGAFLEWMEGKVLPGILALMQA
>NC_012846.1|WP_015856973.1|2142187_2142823_-|thiamine-diphosphokinase
MTTFTILLNGDVCITDRLLNQIQNSRVIAADGGMRHAAALNVSPELWLGDFDSSDENLIREYSHVPREVFPSDKDMTDSALACERALQNGAKKLILCGALGGERSDHSLSHMTQALVMAERGISVLLTSGLEEGWPVLSKPCSYDLPKGCLFSIIGFSDLKGLTLSGVKWPICDKNVSFGSSLTLSNRICGTFSCHLGSGKAILLASVPIP
>NC_012846.1|WP_015856974.1|2142970_2144548_+|M48-family-metalloprotease
MQFAKLLRRNNVHHDPTHSIFQRKFLFRSRLYKATFISLTFLLSACHTPLSQNDRLSSTSSKTIKRTNNHNIYVTLSALQHPRILQMYGGAYYDAKLEHLLAKIVRKLTVASHSSHQSYSVTILNSESINAFALPNGAIYITRGMLALANDSSEVAAILAHEIAHIRANHGILRLQKEAQLKMANHISSHLLSSIGKKLHNPTQNKQQLAQFSRNQELEADSLALEMLQQAGYDPFASPRFLQTMEAYSALRNISGTQNASLDFLASHPTTPQRIQLAIEKARKISKGNSKTTDRDSFLKSIDGMIFGGGFYTGFVRGNQFIHPQLRIAFSVPNNFTIEHSAHTVWASGPDKIAIRFDAIPHPAGISASDYLKSGWIIGLDQSSIRPITIQGLPHQEFTRQGFQSQSLLGARAYATNEQWQFDVVVIPFNNHIFRFLTAAPHNSQNFVEVAQKTLQSFHSLSSSQLKKLKPLKIRVVRIKQGENVANLANKMQHTPDKEKLFRILNALSPTQTLSAGTKVKIITE
>NC_012846.1|WP_015856975.1|2144864_2145776_-|RNA-polymerase-factor-sigma-32
MGNLSNAVYKSSKNYSDADKSLGRNMMRSAMQAPYLERQKEHDLALRWKDKRDDDAMHQIAAAHMRLVIAIANRFKRFKMPLGDLVQEGYVGLLEAAARFEPDREVRFSTYATWWIRASIQDYILRNWSIVRGGTSSSQKALFFNLRRLRAKLIQDDSALSKQDIFRTIAEKLGVSVRDVETMDFRFSSSDNSLSVSVSENSDNPIAKMDVLVDDSPLPDALIEQVIDGQRRTQWLYDALQILNERELEIIRFRRLNEEGATLEVLGEKLGISKERVRQIEARALQKLRSALLTVHSEDAYDI
>NC_012846.1|WP_034452305.1|2146355_2147936_+|hypothetical-protein
MDSKIVQQDEILQDDILIEKHGRGKFEGFRFYANKNSTDQIAEKQISTENENLILAFSKRATRFCACANGDFTLGSDGIVRWIGQPVGQLVATEDFFKPKLIVLADEQLTGESRDNVVKRLERFVTFHFETTLKPLFDLRNADNLTDSTNSLALQLFNSLGILPRREVLDIVKELAQESRAVLRRLGVRFGAFHIYVAGMLKPAPVQAITLLWNLQNAEQDQTGLGEILSALSSGRTSLIVDPTYNRQFYQLAGYRILGQRAVRIDILERLANLIRPALHWKQGSDPKPDGAYDGKSFFVTPAMMSILGANGNDMEEILKGLGYQSYSISNTVFEQNLLAHQASSPVNETMQDVPEAECVGSQWKTISDSETTQEEKNTSYPNTLSSGIEKHPYKTNRLPAAEPVWNFAKTPLPTQEDKVILLWHYRHQFHHHAQKKRDKLGNKWQNKSKNAVKKGEHTNENSPQAAPSQTKRSHKFHKSQGKHANHKPFQKEKRLNPDSPFAKLAILRDQLTNHKNTHTLSSKEN
>NC_012846.1|WP_015856977.1|2147957_2148299_+|ferredoxin-family-protein
MTHVVTDNCIHCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAILPDTEPGLEKWLELNLHYANKWPNLTTKKDPLPQAKEMDGVPNKLEKYFSENPGSGEE
>NC_012846.1|WP_015856978.1|2148603_2149188_+|CarD-family-transcriptional-regulator
MASQHGTSSKTKEFATSEYIVYPTHGVGQIIAIEDQEVAGHKLKLFVIHFAKDKMDVKVPIAKALSVGMRKLSASDSVERALKVLRGKARVKRTMWSRRAQEYDAKINSGDLICIAEVVRDLFRSNLQPEQSYSERQLYTAALERMAREIAVINSLSETEAINLIEMHLSNKPKREFKTEREETDESSKAVYAA
>NC_012846.1|WP_005774555.1|2151496_2151676_-|50S-ribosomal-protein-L32
MAVPKRKTSPAKRGMRRSADALKAPTYIEDKNSGELRRPHHIDLKTGMYRGRSVLVVKD
>NC_012846.1|WP_015856979.1|2152102_2153005_+|polyprenyl-synthetase-family-protein
MHEFTTLLAKHGHTVEKRLDTLLSDQIQNGEISRPKNLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVEYSLDVACALECIHCYSLIHDDLPAMDNDILRRGKPTVHIAFDEATAILAGNALLTFAFEIIAHKASTLSTDIRIKLITSLAQSAGLGGMLGGQMLDLEAEKKPQGSSDIITLQHMKTAALISFACQAGAIIGNASKELTEKLTDFGTYLGLAFQLTDDLLDVTANTQTLGKTAGKDETAQKATFVHLYGIEETQKKRDTLISKAEAFLHPFGAKALPLQQAAHFSAIRKN
>NC_012846.1|WP_015856980.1|2155779_2156931_-|MFS-transporter
MTNILAFGFLFNGIRILTGAFIVFYMLEKGLTLIDIGIIKSFQAFIMMVTDIPLGYFADRKSYKISIVLAAAFAATWLCLMGFSTSFYGFLLAESFNALSLTLIAGAYNALLVQYAKAKLTSTKKVLGSSSQYNYIGMFIFSLIGAYFADYSSQYIWYIAAFLMLMTTLFGLFFLDDLKGEKKTNKANSFIYDAKEMLSIFIKVPYISLCFYFSLIFFNIFSQYWQWIFKDHHINVTYFDLGVTFSLILLSQLLASFLFTKLSERVNFILLLFLLGSLIFTMVFFEPKKEIAVILVCMIFYLIKYTYLRVEVVLHDSISDHFRATYESFLSTVGRFSLLVFFYMSAYMVDIFGFFSLVYILGIYLLVYLLAMFFLEGALKKSQ
>NC_012846.1|WP_015856981.1|2157271_2158513_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MSTTYFLSKPLERRQSIGVAVGDVIVGGQSPIVVQSMTNTDTADVDATVAQVAALWQAGSQLVRITVDRDEAAAAVPKIRERLERLGFFVPLVGDFHYIGHKLLSEHPACAEALAKYRINPGNVGFGAKKDRQFAEIIEIACRYHKPIRIGVNWGSLDNALLTRLMNENAQQENPLSVAEVMRETVVQSALQSALWAEEMGLGRDKIILSAKVSDVQDLIAVYTTLAARCDYALHLGLTEAGMGTKGVVASSVALGILLQQGIGDTIRISLTPKPGGDRTREVKVGQELLQVMGFRQFLPVVAACPGCGRTTSTVFQQLAQKIEADLYKNMPVWREKYPGVESLKVAVMGCIVNGPGESKHADIGISLPGVGESPAAPVFIEGQKVKTLRGDHIAEEFEALLSDYIHTRFGQG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_012846_1	1.2\|1129359\|29\|NC_012846\|CRISPRCasFinder	1129359-1129387	29	NC_012846.1	914366-914394	0	1.0
NC_012846_1	1.3\|1129413\|29\|NC_012846\|CRISPRCasFinder	1129413-1129441	29	NC_012846.1	914420-914448	0	1.0
NC_012846_1	1.1\|1129305\|29\|NC_012846\|CRISPRCasFinder	1129305-1129333	29	NC_012846.1	914312-914340	1	0.966

1. spacer 1.2|1129359|29|NC_012846|CRISPRCasFinder matches to position: 914366-914394, mismatch: 0, identity: 1.0

ttctgcatgaccgtaaatgcatggttcat	CRISPR spacer
ttctgcatgaccgtaaatgcatggttcat	Protospacer
*****************************

2. spacer 1.3|1129413|29|NC_012846|CRISPRCasFinder matches to position: 914420-914448, mismatch: 0, identity: 1.0

acgagaattgtcgtaaacctcggcataac	CRISPR spacer
acgagaattgtcgtaaacctcggcataac	Protospacer
*****************************

3. spacer 1.1|1129305|29|NC_012846|CRISPRCasFinder matches to position: 914312-914340, mismatch: 1, identity: 0.966

ttctgcattatcaaaaatgtgcggttcac	CRISPR spacer
ttctgcattatcaaaaacgtgcggttcac	Protospacer
*****************.***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_012846_1	1.3\|1129413\|29\|NC_012846\|CRISPRCasFinder	1129413-1129441	29	MT735629	Vibrio alginolyticus phage vB_ValS_PJ32, complete genome	78205-78233	8	0.724

1. spacer 1.3|1129413|29|NC_012846|CRISPRCasFinder matches to MT735629 (Vibrio alginolyticus phage vB_ValS_PJ32, complete genome) position: , mismatch: 8, identity: 0.724

acgagaattgtcgtaaacctcggcataac	CRISPR spacer
cggtccattgtcgtaaacctcgggataca	Protospacer
  *   ***************** ***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

372751 : 459212

Acidithiobacillus_phage(20.59%)

integrase,tRNA,capsid,head,plate,terminase,tail,portal

attL 370202:370219|attR 458622:458639

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
370202:370219	attL	NA	NA	NA	NA
WP_012754666.1\|372751_375667_+\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	7.9e-64	25.4
WP_012754667.1\|375844_376336_+	hypothetical protein	NA	NA	NA	NA
WP_012754668.1\|376983_377430_-	nucleoside deaminase	NA	NA	NA	NA
WP_012754669.1\|377699_379100_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_012754670.1\|379080_379647_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_012754671.1\|380452_380902_+	hypothetical protein	NA	NA	NA	NA
WP_012754672.1\|382602_383934_+	TldD/PmbA family protein	NA	NA	NA	NA
WP_041581338.1\|383920_384724_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_012754674.1\|384770_385016_+	DUF4170 domain-containing protein	NA	NA	NA	NA
WP_012754675.1\|386463_387786_+	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
WP_012754676.1\|387775_388816_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_012754677.1\|388835_389072_-	DUF2093 domain-containing protein	NA	NA	NA	NA
WP_012754678.1\|389180_391034_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.0e-109	39.9
WP_012754679.1\|391273_392362_+	2'-deoxycytidine 5'-triphosphate deaminase	NA	NA	NA	NA
WP_012754680.1\|393517_394669_+	FMN-dependent L-lactate dehydrogenase LldD	NA	NA	NA	NA
WP_012754682.1\|398669_399332_-	glycoside hydrolase family protein	A0A141GEY9	Brucella_phage	1.5e-42	61.7
WP_012754684.1\|400383_400575_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012754685.1\|401190_401394_+	SlyX family protein	NA	NA	NA	NA
WP_114648008.1\|402466_403897_+	amino acid permease	NA	NA	NA	NA
WP_012754688.1\|403937_404618_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.8e-14	28.9
WP_012754689.1\|404614_405253_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_012754690.1\|405268_405838_+	biotin transporter BioY	NA	NA	NA	NA
WP_012754691.1\|406095_406641_+	biotin transporter BioY	NA	NA	NA	NA
WP_012754692.1\|407875_408733_+	hypothetical protein	NA	NA	NA	NA
WP_026500227.1\|409896_410076_-	hypothetical protein	NA	NA	NA	NA
WP_041581342.1\|412087_412420_+	hypothetical protein	NA	NA	NA	NA
WP_012754696.1\|412571_413036_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_012754697.1\|413144_413612_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_026500621.1\|416283_416628_+	hypothetical protein	NA	NA	NA	NA
WP_012754699.1\|416898_417369_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_026500622.1\|417560_418040_+	hypothetical protein	NA	NA	NA	NA
WP_012754702.1\|419149_419812_+	glycoside hydrolase family protein	A0A141GEY9	Brucella_phage	1.2e-44	63.6
WP_012754703.1\|419808_420036_+	hypothetical protein	NA	NA	NA	NA
WP_041581344.1\|420152_420383_+	hypothetical protein	NA	NA	NA	NA
WP_012754706.1\|420407_421193_+	DNA adenine methylase	R9U1F2	Rhizobium_phage	3.7e-40	36.8
WP_012754707.1\|421257_421632_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012754708.1\|421936_423094_+\|integrase	site-specific integrase	A0A1X9HVL9	Ruegeria_phage	6.1e-76	39.6
WP_015856478.1\|423318_423531_-	hypothetical protein	NA	NA	NA	NA
WP_012754710.1\|423662_423890_-	hypothetical protein	NA	NA	NA	NA
WP_012754711.1\|423886_424549_-	lysozyme	A0A141GEY9	Brucella_phage	1.3e-46	59.6
WP_006589072.1\|424708_425011_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	3.4e-18	49.0
WP_012754712.1\|424997_425318_+	putative addiction module antidote protein	A0A141GEX5	Brucella_phage	1.5e-16	46.2
WP_012754713.1\|425402_426707_-	phage late control protein	K4HZC6	Acidithiobacillus_phage	1.1e-70	38.1
WP_012754714.1\|426703_426928_-\|tail	tail protein X	NA	NA	NA	NA
WP_006589081.1\|426924_427305_-\|tail	phage tail protein	D5LGY3	Escherichia_phage	1.3e-22	43.1
WP_012754715.1\|427310_429443_-\|tail	tail protein	A0A2I5ARC1	Synechococcus_phage	8.8e-12	34.5
WP_114648101.1\|429439_429553_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_015857123.1\|429549_429837_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_012754716.1\|429839_430346_-\|tail	phage major tail tube protein	K4I1G5	Acidithiobacillus_phage	4.5e-31	42.2
WP_012754717.1\|430345_431737_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A088FVH5	Escherichia_phage	1.7e-133	54.1
WP_143711787.1\|433253_433706_-\|tail	tail fiber protein	A0A193GYM0	Enterobacter_phage	1.0e-34	53.2
WP_012754719.1\|434380_437524_-	DUF4815 domain-containing protein	K4ICQ5	Acidithiobacillus_phage	4.7e-155	34.5
WP_012754720.1\|437525_438632_-	hypothetical protein	K4I1F8	Acidithiobacillus_phage	1.1e-21	37.0
WP_015857124.1\|438631_439459_-\|plate	baseplate J/gp47 family protein	A0A219VH98	Ochrobactrum_phage	1.1e-37	33.1
WP_041581347.1\|439455_439797_-	GPW/gp25 family protein	Q75QM0	Wolbachia_phage	1.1e-30	58.7
WP_012754721.1\|439793_440483_-\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	1.2e-13	33.2
WP_012754722.1\|440463_441012_-	hypothetical protein	NA	NA	NA	NA
WP_012754723.1\|441088_441388_+	BrnT family toxin	NA	NA	NA	NA
WP_012754724.1\|441374_441647_+	BrnA antitoxin family protein	NA	NA	NA	NA
WP_012754725.1\|441685_442003_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_041581349.1\|442082_442361_-	hypothetical protein	NA	NA	NA	NA
WP_012754727.1\|442357_443095_-	phage antirepressor Ant	A0A139ZPI9	Marinitoga_camini_virus	9.7e-43	42.7
WP_012754728.1\|443432_443786_-	hypothetical protein	NA	NA	NA	NA
WP_012754729.1\|443787_444864_-\|capsid	major capsid protein	A0A0A8ILA9	Aurantimonas_phage	1.1e-55	34.9
WP_041581350.1\|444876_445245_-\|head	head decoration protein	Q6VT10	Vibrio_phage	3.1e-05	42.1
WP_041581352.1\|445241_445508_-	hypothetical protein	NA	NA	NA	NA
WP_041581525.1\|445504_446587_-	S49 family peptidase	K4HZZ6	Acidithiobacillus_phage	4.5e-65	48.8
WP_012754732.1\|446576_448121_-\|portal	phage portal protein	K4I1F2	Acidithiobacillus_phage	2.3e-94	41.3
WP_015857126.1\|448120_448369_-	hypothetical protein	NA	NA	NA	NA
WP_012754733.1\|448372_450319_-\|terminase	phage terminase large subunit family protein	K4I3Y9	Acidithiobacillus_phage	1.2e-164	52.3
WP_012754734.1\|450308_450878_-	hypothetical protein	NA	NA	NA	NA
WP_026500577.1\|451245_451830_-	hypothetical protein	A0A0A8IL87	Aurantimonas_phage	2.7e-11	33.8
WP_026500578.1\|451833_452148_-	hypothetical protein	NA	NA	NA	NA
WP_012754737.1\|452466_452862_-	type II toxin-antitoxin system HicB family antitoxin	A0A0U4ISP5	Pseudomonas_phage	2.7e-07	34.3
WP_007553727.1\|452858_453059_-	type II toxin-antitoxin system HicA family toxin	A0A1L2JY37	Aeribacillus_phage	1.4e-07	48.2
WP_012754738.1\|453126_453663_-	hypothetical protein	NA	NA	NA	NA
WP_026500580.1\|453674_454127_-	single-stranded DNA-binding protein	A0A0K1LLZ9	Caulobacter_phage	3.3e-33	59.1
WP_004859817.1\|454428_454620_+	hypothetical protein	NA	NA	NA	NA
WP_006589119.1\|454686_455115_+	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PJC0	Moraxella_phage	3.9e-12	36.3
WP_026500581.1\|455162_455441_-	hypothetical protein	NA	NA	NA	NA
WP_012754741.1\|455437_456181_-	phage antirepressor Ant	Q7Y5W2	Haemophilus_phage	8.0e-45	38.7
WP_012754742.1\|456559_457075_-	hypothetical protein	NA	NA	NA	NA
WP_012754743.1\|457061_457409_-	hypothetical protein	NA	NA	NA	NA
WP_172607525.1\|457591_457939_-	hypothetical protein	NA	NA	NA	NA
WP_012754745.1\|457961_459212_-	DUF1376 domain-containing protein	A0A218M9P5	Mycobacterium_phage	2.3e-12	48.0
458622:458639	attR	NA	NA	NA	NA

DBSCAN-SWA_2

907699 : 981922

Edwardsiella_phage(21.43%)

integrase,terminase,capsid,portal

attL 926065:926096|attR 987039:987070

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081429735.1\|907699_908062_+	hypothetical protein	A0A141GEX6	Brucella_phage	7.4e-12	43.8
WP_012755081.1\|908042_908363_+	putative addiction module antidote protein	A0A141GEX5	Brucella_phage	6.3e-15	43.8
WP_012755082.1\|909665_910709_-\|integrase	tyrosine-type recombinase/integrase	I3UM24	Rhodobacter_phage	2.4e-18	26.3
WP_012755083.1\|910715_910934_-	hypothetical protein	NA	NA	NA	NA
WP_041581371.1\|911077_911566_-	DUF488 family protein	A0A1B3AYW8	Gordonia_phage	1.0e-08	30.8
WP_012755085.1\|911635_912259_-	YqaJ viral recombinase family protein	A0A0U2BXF3	Paracoccus_phage	3.5e-46	44.9
WP_012755086.1\|912260_913088_-	recombinase RecT	A0A0M3LR26	Mannheimia_phage	1.5e-39	43.0
WP_012755087.1\|913161_913731_-	hypothetical protein	K4PWT3	Edwardsiella_phage	5.4e-09	55.0
WP_012755088.1\|913736_914126_-	hypothetical protein	K4PXF0	Edwardsiella_phage	3.7e-09	52.7
WP_012755089.1\|914122_914668_-	hypothetical protein	K4PXF0	Edwardsiella_phage	2.3e-09	61.8
WP_012755090.1\|914781_915162_-	hypothetical protein	NA	NA	NA	NA
WP_012755091.1\|915383_915716_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012755092.1\|915829_916111_+	hypothetical protein	NA	NA	NA	NA
WP_012755093.1\|916121_916709_+	hypothetical protein	NA	NA	NA	NA
WP_041581372.1\|916719_916902_+	hypothetical protein	NA	NA	NA	NA
WP_041581373.1\|916931_917180_+	hypothetical protein	NA	NA	NA	NA
WP_012755094.1\|917169_917793_-	hypothetical protein	NA	NA	NA	NA
WP_041581374.1\|917852_918326_+	phage related protein	K4ICN3	Acidithiobacillus_phage	8.4e-48	61.4
WP_012755096.1\|918315_918681_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012755097.1\|918670_919813_+	DUF1376 domain-containing protein	NA	NA	NA	NA
WP_012755098.1\|920072_920402_+	hypothetical protein	NA	NA	NA	NA
WP_012755100.1\|921183_921693_+	antA/AntB antirepressor family protein	A0A139ZPI9	Marinitoga_camini_virus	2.9e-30	47.2
WP_012755101.1\|921774_922215_+	hypothetical protein	A0A076G7L7	Bacillus_phage	2.6e-11	53.6
WP_012755102.1\|922492_923941_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	8.8e-72	35.8
WP_015857127.1\|924029_924305_+	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	5.4e-15	50.7
WP_012755103.1\|925788_926568_-	hypothetical protein	K4PXF0	Edwardsiella_phage	5.7e-09	53.3
926065:926096	attL	NA	NA	NA	NA
WP_015856166.1\|926659_927214_-	hypothetical protein	A0A076G7L7	Bacillus_phage	1.2e-08	49.1
WP_015856167.1\|927299_928070_-	hypothetical protein	A0A076G7L7	Bacillus_phage	7.8e-11	58.2
WP_015856168.1\|929569_934480_-	DEAD/DEAH box helicase	A0A2H4UTW8	Bodo_saltans_virus	1.6e-48	27.1
WP_015856169.1\|935295_937092_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_015856170.1\|937117_945313_+	hemagglutinin repeat-containing protein	NA	NA	NA	NA
WP_015856171.1\|945309_945717_+	hypothetical protein	NA	NA	NA	NA
WP_015856172.1\|945940_946141_-	DNA-binding protein	NA	NA	NA	NA
WP_081429736.1\|946350_947517_-\|integrase	site-specific integrase	A0A1X9HVL9	Ruegeria_phage	6.2e-76	39.0
WP_041581379.1\|947938_948277_+	hypothetical protein	NA	NA	NA	NA
WP_015856174.1\|948263_948794_+	hypothetical protein	NA	NA	NA	NA
WP_015856175.1\|948803_949427_-	hypothetical protein	NA	NA	NA	NA
WP_015856176.1\|949631_949964_+	hypothetical protein	A0A088FAU1	Sulfitobacter_phage	2.7e-08	42.5
WP_015856177.1\|949944_951279_+\|terminase	terminase	A0A088F6U9	Sulfitobacter_phage	4.3e-142	56.0
WP_015856178.1\|951263_953273_+\|portal	phage portal protein	I6NV36	Burkholderia_virus	6.3e-36	23.6
WP_015856179.1\|953286_954180_+	hypothetical protein	NA	NA	NA	NA
WP_015856180.1\|954273_955401_+\|capsid	N4-gp56 family major capsid protein	A0A248SKT9	Klebsiella_phage	5.1e-43	33.2
WP_015856181.1\|955421_955802_+	hypothetical protein	NA	NA	NA	NA
WP_015856182.1\|955813_956194_+	hypothetical protein	NA	NA	NA	NA
WP_015856185.1\|957443_958223_-	hypothetical protein	K4Q356	Edwardsiella_phage	5.7e-09	52.4
WP_015856186.1\|958333_958858_-	hypothetical protein	A0A076G7L7	Bacillus_phage	6.9e-11	51.7
WP_015856187.1\|958940_959774_-	hypothetical protein	K4PXF0	Edwardsiella_phage	9.4e-10	56.6
WP_015856188.1\|961420_966385_-	DEAD/DEAH box helicase	A0A2H4UTW8	Bodo_saltans_virus	2.7e-43	28.3
WP_015856189.1\|967020_968817_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_049757440.1\|976368_977475_+	hypothetical protein	NA	NA	NA	NA
WP_041581383.1\|977471_977879_+	hypothetical protein	NA	NA	NA	NA
WP_041581385.1\|977866_978088_+	hypothetical protein	NA	NA	NA	NA
WP_015856192.1\|978071_978479_+	hypothetical protein	NA	NA	NA	NA
WP_081429758.1\|978749_979298_+	hypothetical protein	NA	NA	NA	NA
WP_015856193.1\|979294_979699_+	hypothetical protein	NA	NA	NA	NA
WP_015856194.1\|979881_980241_+	hypothetical protein	NA	NA	NA	NA
WP_015856195.1\|980344_980545_-	DNA-binding protein	NA	NA	NA	NA
WP_015856196.1\|980755_981922_-\|integrase	site-specific integrase	A0A088F800	Sulfitobacter_phage	2.3e-75	42.5
987039:987070	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1005411 : 1037128

Escherichia_phage(25.0%)

tail,integrase

attL 1005033:1005048|attR 1031799:1031814

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1005033:1005048	attL	NA	NA	NA	NA
WP_015856214.1\|1005411_1006578_-\|integrase	site-specific integrase	A0A088F800	Sulfitobacter_phage	9.8e-74	41.7
WP_015856215.1\|1006802_1007228_+	hypothetical protein	NA	NA	NA	NA
WP_015856216.1\|1007229_1008159_+	hypothetical protein	NA	NA	NA	NA
WP_015856217.1\|1008192_1009593_+	hypothetical protein	NA	NA	NA	NA
WP_015856218.1\|1009594_1011781_+	hypothetical protein	NA	NA	NA	NA
WP_015856219.1\|1011797_1012463_+	transglycosylase SLT domain-containing protein	L7TQZ1	Rhizobium_phage	2.5e-29	48.6
WP_015856220.1\|1012475_1013477_+\|tail	phage tail protein	D5LGZ0	Escherichia_phage	1.6e-19	35.8
WP_015856221.1\|1013485_1014499_+\|tail	phage tail protein	D5LGZ0	Escherichia_phage	3.4e-14	43.0
WP_015856222.1\|1014506_1015634_+\|tail	tail fiber protein	D5LGZ0	Escherichia_phage	5.1e-19	49.5
WP_015856223.1\|1015643_1015877_+	hypothetical protein	NA	NA	NA	NA
WP_015856224.1\|1015898_1020011_+	hypothetical protein	H7BUU8	unidentified_phage	2.1e-17	28.6
WP_015856225.1\|1020020_1020350_+	hypothetical protein	NA	NA	NA	NA
WP_015856226.1\|1020413_1021076_+	glycoside hydrolase family protein	A0A141GEY9	Brucella_phage	3.8e-46	65.6
WP_012754703.1\|1021072_1021300_+	hypothetical protein	NA	NA	NA	NA
WP_041581344.1\|1021416_1021647_+	hypothetical protein	NA	NA	NA	NA
WP_012754703.1\|1022483_1022711_+	hypothetical protein	NA	NA	NA	NA
WP_041581344.1\|1022827_1023058_+	hypothetical protein	NA	NA	NA	NA
WP_012754706.1\|1023082_1023868_+	DNA adenine methylase	R9U1F2	Rhizobium_phage	3.7e-40	36.8
WP_015856229.1\|1024185_1025337_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1X9HVL9	Ruegeria_phage	6.7e-75	39.3
WP_015856478.1\|1025511_1025724_-	hypothetical protein	NA	NA	NA	NA
WP_015856231.1\|1025855_1026083_-	hypothetical protein	NA	NA	NA	NA
WP_015856232.1\|1026079_1026742_-	glycoside hydrolase family protein	A0A141GEY9	Brucella_phage	1.5e-47	60.2
WP_015857128.1\|1026924_1027248_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	1.5e-16	53.2
WP_015856233.1\|1027260_1027572_+	addiction module antidote protein	NA	NA	NA	NA
WP_015856234.1\|1027617_1027896_-	hypothetical protein	NA	NA	NA	NA
WP_015856235.1\|1027892_1028654_-	phage antirepressor Ant	Q7Y5W2	Haemophilus_phage	7.2e-17	29.1
WP_004859798.1\|1028646_1028850_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_015856236.1\|1028925_1029150_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_015856237.1\|1029126_1029546_-	phage antirepressor Ant	A0A0P0ZDY7	Stx2-converting_phage	6.5e-28	53.6
WP_015856238.1\|1029849_1031166_-	phage late control protein	K4HZC6	Acidithiobacillus_phage	4.4e-70	38.7
WP_015856239.1\|1031162_1031387_-\|tail	tail protein X	R9TR63	Vibrio_phage	4.1e-05	50.0
WP_015856240.1\|1031383_1031764_-\|tail	phage tail protein	D5LGY3	Escherichia_phage	4.4e-23	43.9
WP_015856241.1\|1031769_1034067_-\|tail	tail protein	A0A0E3U2N9	Fusobacterium_phage	1.7e-13	25.4
1031799:1031814	attR	NA	NA	NA	NA
WP_114648101.1\|1034063_1034177_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_015857123.1\|1034173_1034461_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_012754716.1\|1034463_1034970_-\|tail	phage major tail tube protein	K4I1G5	Acidithiobacillus_phage	4.5e-31	42.2
WP_015856242.1\|1034969_1036181_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A088FVH5	Escherichia_phage	2.9e-129	52.7
WP_015856243.1\|1036537_1037128_+	phage antirepressor Ant	Q7Y5W2	Haemophilus_phage	4.4e-22	48.8

DBSCAN-SWA_4

1040309 : 1065911

Acidithiobacillus_phage(33.33%)

capsid,head,plate,terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015856248.1\|1040309_1043453_-	DUF4815 domain-containing protein	K4ICQ5	Acidithiobacillus_phage	5.2e-154	34.4
WP_012754720.1\|1043454_1044561_-	hypothetical protein	K4I1F8	Acidithiobacillus_phage	1.1e-21	37.0
WP_015857129.1\|1044560_1045388_-\|plate	baseplate J/gp47 family protein	A0A219VH98	Ochrobactrum_phage	3.6e-38	33.5
WP_026500562.1\|1045384_1045726_-	GPW/gp25 family protein	Q75QM0	Wolbachia_phage	3.0e-31	58.7
WP_012754721.1\|1045722_1046412_-\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	1.2e-13	33.2
WP_012754722.1\|1046392_1046941_-	hypothetical protein	NA	NA	NA	NA
WP_012754723.1\|1047017_1047317_+	BrnT family toxin	NA	NA	NA	NA
WP_012754724.1\|1047303_1047576_+	BrnA antitoxin family protein	NA	NA	NA	NA
WP_012754725.1\|1047614_1047932_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_041581349.1\|1048010_1048289_-	hypothetical protein	NA	NA	NA	NA
WP_015856249.1\|1048285_1049017_-	phage antirepressor Ant	Q7Y5W2	Haemophilus_phage	6.4e-47	39.8
WP_006589102.1\|1049436_1050333_-	hypothetical protein	A0A0A7NQP6	Lactobacillus_phage	1.6e-07	50.9
WP_015856250.1\|1050363_1050717_-	hypothetical protein	NA	NA	NA	NA
WP_012754729.1\|1050718_1051795_-\|capsid	major capsid protein	A0A0A8ILA9	Aurantimonas_phage	1.1e-55	34.9
WP_041581564.1\|1051807_1052176_-\|head	head decoration protein	Q6VT10	Vibrio_phage	3.1e-05	42.1
WP_026500571.1\|1052172_1052439_-	hypothetical protein	NA	NA	NA	NA
WP_041581566.1\|1052435_1053509_-	S49 family peptidase	K4HZZ6	Acidithiobacillus_phage	1.2e-65	49.1
WP_012754732.1\|1053498_1055043_-\|portal	phage portal protein	K4I1F2	Acidithiobacillus_phage	2.3e-94	41.3
WP_015857126.1\|1055042_1055291_-	hypothetical protein	NA	NA	NA	NA
WP_012754733.1\|1055294_1057241_-\|terminase	phage terminase large subunit family protein	K4I3Y9	Acidithiobacillus_phage	1.2e-164	52.3
WP_012754734.1\|1057230_1057800_-	hypothetical protein	NA	NA	NA	NA
WP_026500577.1\|1058167_1058752_-	hypothetical protein	A0A0A8IL87	Aurantimonas_phage	2.7e-11	33.8
WP_015856253.1\|1058755_1059070_-	hypothetical protein	NA	NA	NA	NA
WP_015856254.1\|1059419_1059602_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_015856255.1\|1059622_1060045_+	hypothetical protein	Q7Y3V7	Yersinia_phage	3.7e-15	35.7
WP_015856256.1\|1060048_1060591_-	hypothetical protein	NA	NA	NA	NA
WP_015856257.1\|1060602_1061058_-	single-stranded DNA-binding protein	A0A0K1LLZ9	Caulobacter_phage	3.6e-32	58.3
WP_015856258.1\|1061194_1061575_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015856259.1\|1061607_1062474_-	DNA adenine methylase	A0A2K9R7J9	Dishui_lake_phycodnavirus	2.2e-14	24.6
WP_012754742.1\|1062586_1063102_-	hypothetical protein	NA	NA	NA	NA
WP_041581397.1\|1063088_1063436_-	hypothetical protein	NA	NA	NA	NA
WP_172607525.1\|1063616_1063964_-	hypothetical protein	NA	NA	NA	NA
WP_015856261.1\|1063986_1065114_-	DUF1376 domain-containing protein	A0A218M9P5	Mycobacterium_phage	9.7e-10	44.0
WP_041581398.1\|1065103_1065439_-	DUF1376 domain-containing protein	NA	NA	NA	NA
WP_015856263.1\|1065428_1065911_-	hypothetical protein	K4ICN3	Acidithiobacillus_phage	3.1e-50	65.2

DBSCAN-SWA_5

1123116 : 1151153

Ochrobactrum_phage(13.64%)

integrase,capsid,terminase,tail,portal

attL 1111736:1111752|attR 1159172:1159188

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1111736:1111752	attL	NA	NA	NA	NA
WP_015856305.1\|1123116_1123578_+\|tail	phage tail protein	A0A219VHA8	Ochrobactrum_phage	3.7e-24	40.8
WP_015856306.1\|1123574_1123829_+\|tail	tail protein X	A0A219VHB0	Ochrobactrum_phage	5.5e-14	49.4
WP_041581568.1\|1123828_1124851_+	phage late control protein	A0A219VHA9	Ochrobactrum_phage	1.9e-89	52.5
WP_041581402.1\|1124807_1126268_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	1.8e-72	35.9
WP_004854509.1\|1126665_1126947_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A0M3LQB1	Mannheimia_phage	1.1e-15	45.1
WP_015856309.1\|1126962_1127262_+	HigA family addiction module antidote protein	A0A0M3LPV0	Mannheimia_phage	2.8e-17	48.9
WP_015856310.1\|1127299_1128337_-\|integrase	tyrosine-type recombinase/integrase	I3UM24	Rhodobacter_phage	8.9e-18	26.8
WP_015857131.1\|1128339_1128588_-	hypothetical protein	NA	NA	NA	NA
WP_015856311.1\|1128663_1129119_-	hypothetical protein	K4PXF0	Edwardsiella_phage	3.1e-07	59.1
WP_015856312.1\|1129115_1129661_-	hypothetical protein	K4PXF0	Edwardsiella_phage	5.2e-09	55.6
WP_015856313.1\|1129793_1130282_-	DUF488 family protein	A0A1B3AYW8	Gordonia_phage	2.7e-09	31.1
WP_015856314.1\|1130349_1130973_-	YqaJ viral recombinase family protein	A0A0U2BXF3	Paracoccus_phage	2.1e-46	43.9
WP_015856317.1\|1131907_1132666_-	phage antirepressor Ant	Q7Y5W2	Haemophilus_phage	7.1e-41	41.8
WP_015856318.1\|1132730_1133105_-	hypothetical protein	NA	NA	NA	NA
WP_015856319.1\|1133263_1133881_-	helix-turn-helix domain-containing protein	A0A1X9HW95	Ruegeria_phage	1.5e-17	41.8
WP_015856320.1\|1133990_1134242_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_015856321.1\|1134369_1135500_+	YdaU family protein	A0A076GD06	Sinorhizobium_phage	3.3e-18	41.8
WP_172607525.1\|1135522_1135870_+	hypothetical protein	NA	NA	NA	NA
WP_012754743.1\|1136052_1136400_+	hypothetical protein	NA	NA	NA	NA
WP_004854238.1\|1137031_1137337_-	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	7.4e-05	40.0
WP_015856322.1\|1137314_1137614_-	BrnT family toxin	NA	NA	NA	NA
WP_041581404.1\|1137807_1138251_+	single-stranded DNA-binding protein	A0A0K1LLZ9	Caulobacter_phage	8.4e-34	61.7
WP_015856324.1\|1138304_1138799_+	hypothetical protein	NA	NA	NA	NA
WP_007346764.1\|1138895_1139123_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_015856325.1\|1139106_1139376_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5SB46	Streptococcus_phage	2.9e-13	46.3
WP_041581407.1\|1139926_1140412_-	hypothetical protein	NA	NA	NA	NA
WP_041581409.1\|1140481_1140859_-	hypothetical protein	NA	NA	NA	NA
WP_015856329.1\|1141157_1141472_+	hypothetical protein	A0A088FAU1	Sulfitobacter_phage	9.6e-08	40.2
WP_015856330.1\|1141452_1142778_+\|terminase	terminase	A0A088F6U9	Sulfitobacter_phage	2.4e-145	57.4
WP_015856331.1\|1142762_1144817_+\|portal	phage portal protein	C5IHN8	Burkholderia_virus	1.2e-29	23.6
WP_015856332.1\|1144828_1145740_+	hypothetical protein	NA	NA	NA	NA
WP_015856333.1\|1145837_1146983_+\|capsid	N4-gp56 family major capsid protein	A0A248SKT9	Klebsiella_phage	8.8e-35	31.6
WP_015856334.1\|1147002_1147443_+	hypothetical protein	NA	NA	NA	NA
WP_015856335.1\|1147515_1148214_+	hypothetical protein	NA	NA	NA	NA
WP_015856336.1\|1148213_1149671_+	hypothetical protein	D6PEY0	uncultured_phage	1.1e-42	28.2
WP_041581411.1\|1149712_1150096_+	hypothetical protein	NA	NA	NA	NA
WP_015856338.1\|1150097_1151153_+\|tail	tail fiber domain-containing protein	NA	NA	NA	NA
1159172:1159188	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1390109 : 1398535

uncultured_Mediterranean_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015856522.1\|1390109_1390622_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	8.5e-46	59.2
WP_015856523.1\|1390640_1391234_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.1e-44	53.9
WP_015856524.1\|1391236_1391743_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	5.8e-23	35.2
WP_015856525.1\|1391767_1394551_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	9.2e-102	34.2
WP_015856526.1\|1394779_1395286_-	single-stranded DNA-binding protein	A0A0K1LLZ9	Caulobacter_phage	2.0e-47	67.3
WP_015856527.1\|1395619_1398535_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	62.4

DBSCAN-SWA_7

1806254 : 1885850

Ochrobactrum_phage(41.67%)

tail,integrase

attL 1797287:1797304|attR 1880306:1880323

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1797287:1797304	attL	NA	NA	NA	NA
WP_015856774.1\|1806254_1807436_-\|integrase	site-specific integrase	A0A088F800	Sulfitobacter_phage	1.5e-77	42.8
WP_015856775.1\|1807662_1808043_+	helix-turn-helix transcriptional regulator	K4K6E9	Caulobacter_phage	2.2e-14	47.0
WP_015856776.1\|1809314_1810346_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_015856777.1\|1810627_1811260_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_015856778.1\|1811780_1812599_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_015856779.1\|1812626_1813661_+	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-27	33.8
WP_015856780.1\|1813653_1814313_+	ABC transporter permease	NA	NA	NA	NA
WP_015856781.1\|1815257_1815737_-	MaoC family dehydratase	NA	NA	NA	NA
WP_015856782.1\|1815900_1817235_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_015856783.1\|1818024_1818381_-	hypothetical protein	NA	NA	NA	NA
WP_015856784.1\|1820677_1821421_+	creatininase family protein	NA	NA	NA	NA
WP_015856785.1\|1821442_1822465_+	GTP-binding protein	NA	NA	NA	NA
WP_015856786.1\|1822475_1823447_+	hypothetical protein	NA	NA	NA	NA
WP_015856787.1\|1823701_1827340_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_015856788.1\|1827492_1830981_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_143711779.1\|1833234_1833570_-	hypothetical protein	NA	NA	NA	NA
WP_015856789.1\|1834054_1837480_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_015856790.1\|1837923_1840764_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_026500773.1\|1841925_1845060_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_081429763.1\|1845734_1851224_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_015856793.1\|1852351_1853302_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_015856794.1\|1853404_1854361_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	1.2e-64	43.8
WP_015856795.1\|1854353_1855304_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_015856796.1\|1855300_1856059_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	1.0e-15	27.1
WP_041581402.1\|1856350_1857811_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	1.8e-72	35.9
WP_041581595.1\|1857767_1858790_-	phage late control protein	A0A219VHA9	Ochrobactrum_phage	8.0e-88	52.2
WP_015856683.1\|1858789_1859044_-\|tail	tail protein X	A0A219VHB0	Ochrobactrum_phage	9.4e-14	49.4
WP_015856305.1\|1859040_1859502_-\|tail	phage tail protein	A0A219VHA8	Ochrobactrum_phage	3.7e-24	40.8
WP_015856798.1\|1859588_1861925_-\|tail	phage tail tape measure protein	A0A219VHB3	Ochrobactrum_phage	3.9e-114	50.1
WP_015856799.1\|1862056_1862470_-	hypothetical protein	NA	NA	NA	NA
WP_015856800.1\|1862479_1862998_-\|tail	phage major tail tube protein	A0A219VHB2	Ochrobactrum_phage	2.9e-62	64.1
WP_015856802.1\|1864290_1864500_-	4-oxalocrotonate tautomerase family protein	NA	NA	NA	NA
WP_143711780.1\|1864514_1865756_-	hypothetical protein	NA	NA	NA	NA
WP_015856804.1\|1865844_1867713_-	FAD/NAD(P)-binding protein	NA	NA	NA	NA
WP_015856805.1\|1867808_1868987_-	YbfB/YjiJ family MFS transporter	NA	NA	NA	NA
WP_015856807.1\|1870492_1870693_-	hypothetical protein	NA	NA	NA	NA
WP_015856810.1\|1873452_1874673_+	MFS transporter	NA	NA	NA	NA
WP_015856811.1\|1876517_1877717_+	porin	NA	NA	NA	NA
WP_015856812.1\|1879018_1879825_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	3.1e-10	33.5
WP_015856813.1\|1880684_1882859_-	isocitrate/isopropylmalate dehydrogenase family protein	NA	NA	NA	NA
1880306:1880323	attR	NA	NA	NA	NA
WP_015856814.1\|1882855_1883587_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_015856815.1\|1883848_1885045_-	multidrug effflux MFS transporter	NA	NA	NA	NA
WP_015856816.1\|1885676_1885850_+\|tail	phage tail assembly protein	NA	NA	NA	NA

DBSCAN-SWA_8

1919152 : 1979166

Caulobacter_phage(31.25%)

integrase,capsid,head,terminase,tail,portal

attL 1947625:1947659|attR 1984423:1984457

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015857133.1\|1919152_1920292_-\|tail	tail fiber domain-containing protein	NA	NA	NA	NA
WP_015856829.1\|1920288_1920771_-	hypothetical protein	NA	NA	NA	NA
WP_015856830.1\|1921050_1922514_-	hypothetical protein	D6PEY0	uncultured_phage	7.8e-44	27.8
WP_015856831.1\|1923018_1923714_-	hypothetical protein	NA	NA	NA	NA
WP_015856832.1\|1923796_1924915_-\|capsid	N4-gp56 family major capsid protein	A0A248SKT9	Klebsiella_phage	1.1e-42	33.2
WP_015856833.1\|1925208_1925982_-	hypothetical protein	NA	NA	NA	NA
WP_041581454.1\|1926291_1928127_-\|portal	phage portal protein	I6NV36	Burkholderia_virus	1.6e-33	23.9
WP_015856835.1\|1928126_1929488_-\|terminase	terminase	A0A088F6U9	Sulfitobacter_phage	4.9e-141	55.1
WP_172607508.1\|1930372_1930534_-	hypothetical protein	NA	NA	NA	NA
WP_041581600.1\|1930691_1931015_-	hypothetical protein	NA	NA	NA	NA
WP_041581456.1\|1932213_1932585_+	helix-turn-helix transcriptional regulator	K4K6E9	Caulobacter_phage	1.8e-13	57.7
WP_081429746.1\|1933395_1933698_+	helix-turn-helix transcriptional regulator	K4K6E9	Caulobacter_phage	1.9e-08	56.1
WP_015856838.1\|1937376_1937748_+	helix-turn-helix transcriptional regulator	K4K6E9	Caulobacter_phage	2.9e-11	52.8
WP_041581461.1\|1938506_1938878_+	helix-turn-helix transcriptional regulator	K4K6E9	Caulobacter_phage	2.0e-12	55.1
WP_041581463.1\|1939626_1939998_+	helix-turn-helix transcriptional regulator	K4K6E9	Caulobacter_phage	2.2e-11	52.8
WP_015856841.1\|1940322_1941393_-\|head	phage head protein	NA	NA	NA	NA
WP_015856842.1\|1942230_1944810_-	ATP-dependent chaperone ClpB	K4FB40	Cronobacter_phage	4.8e-121	38.5
WP_015856843.1\|1945365_1946388_+	hypothetical protein	NA	NA	NA	NA
1947625:1947659	attL	NA	NA	NA	NA
WP_015856844.1\|1948539_1948911_+	helix-turn-helix transcriptional regulator	Q8W6G2	Sinorhizobium_phage	6.4e-11	49.3
WP_015856765.1\|1950771_1951551_-	hypothetical protein	K4Q356	Edwardsiella_phage	2.5e-09	54.0
WP_041581422.1\|1951641_1952094_-	hypothetical protein	A0A076G7L7	Bacillus_phage	2.7e-11	53.4
WP_015856203.1\|1952177_1953011_-	hypothetical protein	K4PXF0	Edwardsiella_phage	5.5e-10	56.6
WP_026500656.1\|1954345_1954603_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_041581390.1\|1955436_1955616_+	hypothetical protein	NA	NA	NA	NA
WP_015856846.1\|1955608_1957369_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_026500596.1\|1965649_1966003_+	hypothetical protein	NA	NA	NA	NA
WP_015856848.1\|1966009_1968622_+	hypothetical protein	NA	NA	NA	NA
WP_015856771.1\|1974988_1976596_-	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_041581449.1\|1976608_1977508_-	toprim domain-containing protein	A0A2I6UGE7	Salinibacter_virus	2.0e-05	55.0
WP_015856773.1\|1977607_1977808_-	DNA-binding protein	NA	NA	NA	NA
WP_015856774.1\|1977984_1979166_-\|integrase	site-specific integrase	A0A088F800	Sulfitobacter_phage	1.5e-77	42.8
1984423:1984457	attR	NA	NA	NA	NA

DBSCAN-SWA_9

2237636 : 2245783

Rhizobium_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015857042.1\|2237636_2238605_+	tyrosine recombinase XerC	A0A0B5GXV1	Mycobacterium_phage	3.3e-14	29.5
WP_015857043.1\|2238625_2238898_-	BolA family transcriptional regulator	NA	NA	NA	NA
WP_015857044.1\|2239022_2239643_+	J domain-containing protein	NA	NA	NA	NA
WP_015857045.1\|2239844_2240825_+	cobaltochelatase subunit CobS	L7TKP0	Rhizobium_phage	6.0e-40	34.6
WP_015857046.1\|2240839_2242735_+	cobaltochelatase subunit CobT	L7TNG1	Rhizobium_phage	9.2e-21	29.8
WP_187147391.1\|2242785_2243322_-	HaeIII family restriction endonuclease	NA	NA	NA	NA
WP_026500177.1\|2243290_2243638_-	HaeIII family restriction endonuclease	NA	NA	NA	NA
WP_026500176.1\|2243690_2244068_-	DNA adenine methylase	A0A2K9R7J9	Dishui_lake_phycodnavirus	7.2e-18	40.8
WP_049757454.1\|2244103_2244541_-	DNA adenine methylase	A0A0E3HSH4	Synechococcus_phage	1.4e-09	37.1
WP_162147208.1\|2244582_2244723_-\|transposase	transposase	NA	NA	NA	NA
WP_015857047.1\|2245099_2245783_-	VUT family protein	A0A2I7SAW6	Vibrio_phage	1.3e-20	33.3

Anti-CRISPR protein detection

Acr_ID: NC_012846.1|WP_015856186.1|958333_958858_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_012846.1|WP_015856186.1|958333_958858_-|hypothetical-protein

958333_958858_-

174 aa aa

907699-981922

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_012846_1	Orphan	1.1\|1129305\|29\|NC_012846\|CRISPRCasFinder	1129305-1129333	29	914312-914340	1
NC_012846_1	Orphan	1.2\|1129359\|29\|NC_012846\|CRISPRCasFinder	1129359-1129387	29	914366-914394	0
NC_012846_1	Orphan	1.3\|1129413\|29\|NC_012846\|CRISPRCasFinder	1129413-1129441	29	914420-914448	0

1. spacer 1.1|1129305|29|NC_012846|CRISPRCasFinder matches to NC_012846 position: 914312-914340, mismatch: 1

ttctgcattatcaaaaatgtgcggttcac	CRISPR spacer
ttctgcattatcaaaaacgtgcggttcac	Protospacer
*****************.***********

2. spacer 1.2|1129359|29|NC_012846|CRISPRCasFinder matches to NC_012846 position: 914366-914394, mismatch: 0

ttctgcatgaccgtaaatgcatggttcat	CRISPR spacer
ttctgcatgaccgtaaatgcatggttcat	Protospacer
*****************************

3. spacer 1.3|1129413|29|NC_012846|CRISPRCasFinder matches to NC_012846 position: 914420-914448, mismatch: 0

acgagaattgtcgtaaacctcggcataac	CRISPR spacer
acgagaattgtcgtaaacctcggcataac	Protospacer
*****************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_012846

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information