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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP001621 Mycoplasma mycoides subsp. capri str. GM12 transgenic clone tetM-lacZ, complete genome 7 crisprs NA 0 1 1 0

Results visualization

1. NZ_CP001621
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001621_1 130416-130499 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001621_2 219266-219356 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001621_3 248393-248489 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001621_4 288706-288852 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001621_5 577796-577976 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001621_6 668328-668431 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001621_7 1051558-1051663 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP001621_2 2.1|219295|33|NZ_CP001621|CRISPRCasFinder 219295-219327 33 NZ_CP013682 Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence 13914-13946 8 0.758
NZ_CP001621_2 2.1|219295|33|NZ_CP001621|CRISPRCasFinder 219295-219327 33 NZ_CP013295 Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence 24630-24662 8 0.758
NZ_CP001621_2 2.1|219295|33|NZ_CP001621|CRISPRCasFinder 219295-219327 33 MN812211 Flavobacterium phage vB_FspS_laban6-1, complete genome 22169-22201 9 0.727
NZ_CP001621_2 2.1|219295|33|NZ_CP001621|CRISPRCasFinder 219295-219327 33 CP019152 Acinetobacter lwoffii strain ZS207 plasmid pZS-2, complete sequence 8788-8820 9 0.727
NZ_CP001621_2 2.1|219295|33|NZ_CP001621|CRISPRCasFinder 219295-219327 33 MN693975 Marine virus AFVG_250M1117, complete genome 8793-8825 9 0.727

1. spacer 2.1|219295|33|NZ_CP001621|CRISPRCasFinder matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 8, identity: 0.758

gttcattataattttatcataaaaatacctacg	CRISPR spacer
atctgctataatttcatcataaaaataccaacc	Protospacer
.*....********.************** ** 

2. spacer 2.1|219295|33|NZ_CP001621|CRISPRCasFinder matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 8, identity: 0.758

gttcattataattttatcataaaaatacctacg	CRISPR spacer
atctgctataatttcatcataaaaataccaacc	Protospacer
.*....********.************** ** 

3. spacer 2.1|219295|33|NZ_CP001621|CRISPRCasFinder matches to MN812211 (Flavobacterium phage vB_FspS_laban6-1, complete genome) position: , mismatch: 9, identity: 0.727

gttcattataattttatcataaaaatacctacg	CRISPR spacer
ttttattataattttataataaaaatcaacaat	Protospacer
 **.************* ********   .*  

4. spacer 2.1|219295|33|NZ_CP001621|CRISPRCasFinder matches to CP019152 (Acinetobacter lwoffii strain ZS207 plasmid pZS-2, complete sequence) position: , mismatch: 9, identity: 0.727

gttcattataattttatcataaaaatacctacg	CRISPR spacer
gagcattataattttaacataaatatatgaatt	Protospacer
*  ************* ****** ***.  *. 

5. spacer 2.1|219295|33|NZ_CP001621|CRISPRCasFinder matches to MN693975 (Marine virus AFVG_250M1117, complete genome) position: , mismatch: 9, identity: 0.727

gttcattataattttatcataaa-----aatacctacg	CRISPR spacer
tttcattataatttgatcatcaaaaagtaatat-----	Protospacer
 ************* ***** **     ****.     

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 903165 : 917209 14 Lactococcus_phage(25.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage