CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_013162	Capnocytophaga ochracea DSM 7271, complete sequence	16 crisprs	DEDDh,cas9,WYL,cas3	10	10	2	1

1. NC_013162

CRISPR-Cas detection and classification

Crispr_ID: NC_013162_1

• CRISPR_ID: NC_013162_1
• CRISPR_location: 22560-22767
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_013162_1

Consensus_repeat	Method
AAATGACGAACAAAAGACGAACAAAAGACGAA	CRT

spacers of NC_013162_1

>1.1|22592|23|NC_013162|CRT
CAAATGATGAACAAAAGACGAAC
>1.2|22647|34|NC_013162|CRT
GCGAGTCGCACGGGCAGATAGAGAAAGGACGAAG
>1.3|22713|23|NC_013162|CRT
CAATGAACGAACAATGAACGAAC

CRISPR arrays and Neighbor proteins around NC_013162_1

CRISPR arrays

The CRISPR arrays of NC_013162_1

>merge|NC_013162|1|22560-22767|CRT
AATTAACGAACAAAAGACGAACAAAAGACGAACAAATGATGAACAAAAGACGAACAAATGATGAACAAAAGACGAACAAAAGACGGTGCGAGTCGCACGGGCAGATAGAGAAAGGACGAAGAAATGACGAACAAAAGACGAACAAAAGACGAACAATGAACGAACAATGAACGAACAAATGACGAACAAAAGGCGAACAATGAACGAA

>NC_013162|1|1|22560-22767|CRT
AATTAACGAACAAAAGACGAACAAAAGACGAA	CAAATGATGAACAAAAGACGAAC
AAATGATGAACAAAAGACGAACAAAAGACGGT	GCGAGTCGCACGGGCAGATAGAGAAAGGACGAAG
AAATGACGAACAAAAGACGAACAAAAGACGAA	CAATGAACGAACAATGAACGAAC
AAATGACGAACAAAAGGCGAACAATGAACGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_012796836.1|31847_32585_-|3-deoxy-manno-octulosonate-cytidylyltransferase	unknown	unknown	gnl|CDD|133010
NC_013162.1|WP_002672685.1|10583_11051_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_012796837.1|32587_33031_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_012796829.1|19577_20315_-|EthD-domain-containing-protein	unknown	unknown	gnl|CDD|369213
NC_013162.1|WP_012796831.1|23002_25855_+|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|350770
NC_013162.1|WP_012796830.1|20494_22390_-|molecular-chaperone-HtpG	unknown	unknown	gnl|CDD|235366
NC_013162.1|WP_012796828.1|18889_19462_-|alkylphosphonate-utilization-protein	unknown	unknown	gnl|CDD|377140
NC_013162.1|WP_012796834.1|28357_30139_-|cell-division-protein-FtsZ	unknown	unknown	gnl|CDD|236468
NC_013162.1|WP_002672717.1|33110_34463_-|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl|CDD|236307
NC_013162.1|WP_012796835.1|30168_31596_-|cell-division-protein-FtsA	unknown	unknown	gnl|CDD|223918
NC_013162.1|WP_012796832.1|26455_26965_+|DUF4252-domain-containing-protein	unknown	unknown	gnl|CDD|379445
NC_013162.1|WP_012796827.1|17264_18812_-|exo-alpha-sialidase	unknown	unknown	gnl|CDD|271234
NC_013162.1|WP_009421325.1|26215_26440_+|hypothetical-protein	unknown	unknown	gnl|CDD|236795
NC_013162.1|WP_012796833.1|26972_28256_+|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl|CDD|237001
NC_013162.1|WP_009417816.1|14648_15518_-|mechanosensitive-ion-channel	unknown	unknown	gnl|CDD|366370
NC_013162.1|WP_012796826.1|15656_17126_-|IMP-dehydrogenase	unknown	unknown	gnl|CDD|376340
NC_013162.1|WP_012796825.1|13307_14636_-|potassium-transporter-KtrB	unknown	unknown	gnl|CDD|273349
NC_013162.1|WP_009421394.1|25910_26198_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_012796823.1|11209_12190_-|DUF3644-domain-containing-protein	unknown	unknown	gnl|CDD|378842
NC_013162.1|WP_012796824.1|12653_13304_-|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl|CDD|223643

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_012796836.1|31847_32585_-|3-deoxy-manno-octulosonate-cytidylyltransferase	gnl|CDD|133010	cd02517, CMP-KDO-Synthetase, CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide. CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design.	7.31904e-124
NC_013162.1|WP_012796829.1|19577_20315_-|EthD-domain-containing-protein	gnl|CDD|369213	pfam07110, EthD, EthD domain. This family consists of several bacterial sequences which are related to the EthD protein of Rhodococcus ruber. In Rhodococcus ruber, EthD is thought to be involved in the degradation of ethyl tert-butyl ether (ETBE). EthD synthesis is induced by ETBE but it's exact function is unknown, it is however thought to be essential to the ETBE degradation system.	2.48208e-14
NC_013162.1|WP_012796830.1|20494_22390_-|molecular-chaperone-HtpG	gnl|CDD|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NC_013162.1|WP_012796828.1|18889_19462_-|alkylphosphonate-utilization-protein	gnl|CDD|377140	pfam03831, PhnA, PhnA domain.	4.91255e-34
NC_013162.1|WP_012796834.1|28357_30139_-|cell-division-protein-FtsZ	gnl|CDD|236468	PRK09330, PRK09330, cell division protein FtsZ; Validated.	5.52615e-153
NC_013162.1|WP_002672717.1|33110_34463_-|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl|CDD|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NC_013162.1|WP_012796835.1|30168_31596_-|cell-division-protein-FtsA	gnl|CDD|223918	COG0849, ftsA, Cell division ATPase FtsA [Cell division and chromosome partitioning].	7.76363e-113
NC_013162.1|WP_012796827.1|17264_18812_-|exo-alpha-sialidase	gnl|CDD|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	4.5864e-112
NC_013162.1|WP_009421325.1|26215_26440_+|hypothetical-protein	gnl|CDD|236795	PRK10920, PRK10920, putative uroporphyrinogen III C-methyltransferase; Provisional.	0.00239633
NC_013162.1|WP_012796833.1|26972_28256_+|2-oxo-acid-dehydrogenase-subunit-E2	gnl|CDD|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	6.35636e-134
NC_013162.1|WP_009417816.1|14648_15518_-|mechanosensitive-ion-channel	gnl|CDD|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	4.61642e-39
NC_013162.1|WP_012796831.1|23002_25855_+|DEAD/DEAH-box-helicase	gnl|CDD|350770	cd18012, DEXQc_arch_SWI2_SNF2, DEAQ-box helicase domain of archaeal and bacterial SNF2-related proteins. Proteins belonging to SNF2 family of DNA dependent ATPases are important members of the chromatin remodeling complexes that are implicated in epigenetic control of gene expression. The Snf2 family comprises a large group of ATP-hydrolyzing proteins that are ubiquitous in eukaryotes, but also present in eubacteria and archaea. Archaeal SWI2 and SNF2 are members of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	6.46389e-94
NC_013162.1|WP_012796825.1|13307_14636_-|potassium-transporter-KtrB	gnl|CDD|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	3.27314e-85
NC_013162.1|WP_012796832.1|26455_26965_+|DUF4252-domain-containing-protein	gnl|CDD|379445	pfam14060, DUF4252, Domain of unknown function (DUF4252). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 154 and 182 amino acids in length.	2.35402e-30
NC_013162.1|WP_012796823.1|11209_12190_-|DUF3644-domain-containing-protein	gnl|CDD|378842	pfam12358, DUF3644, Protein of unknown function (DUF3644). This domain family is found in bacteria, and is typically between 65 and 80 amino acids in length.	6.02771e-20
NC_013162.1|WP_012796826.1|15656_17126_-|IMP-dehydrogenase	gnl|CDD|376340	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain. This family is involved in biosynthesis of guanosine nucleotide. Members of this family contain a TIM barrel structure. In the inosine monophosphate dehydrogenases 2 CBS domains pfam00571 are inserted in the TIM barrel. This family is a member of the common phosphate binding site TIM barrel family.	0
NC_013162.1|WP_012796824.1|12653_13304_-|TrkA-family-potassium-uptake-protein	gnl|CDD|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	1.17182e-47

Protein sequences

>NC_013162.1|WP_012796830.1|20494_22390_-|molecular-chaperone-HtpG
MKGNINVSVENIFPLIKKFLYSDHEIFLRELISNATDATLKLKHLTTIGEAKVEYGNPIIEVKVDKDNKTLHIIDQGIGMTAEEVEKYINQIAFSGAEEFLEKYKDTAKDAGVIGHFGLGFYSAFMVAKQVEIITKSYTDAPAVRWVCDGSPEFTLEETDLRTERGTEIILHIADDSTEFLEDFRIEELLRKYNRFMPIPIKFGTKQEPLPRPENAPEDYKTEYVTVDNIVNNPNPAWTKQPADLKDEDYKAFYHELYPMQFDEPLFYIHLNVDYPFHLTGILYFPKLTNDMQLQKDRIQLYQNQVFVTDNVEGIVPEFLTMLKGVIDSPDIPLNVSRSYLQSDGNVKKIANYITRKVADKLKSLFTNNRDDFQNKWNDIKIVLEYGMLTDDKFYEKAADFMLYPTTDGKYYTLAELKEAIKAEQTDKNGTLVVLYAQNKEQQYTAIEQAKEKGYEVLLLDSPIVSHLVQKLESDNEKLTFTRVDAAPVAKLIQKEEPIIAKLSDEEKNTLKAEIEKVIPKEGYMVQLEDLDSDDTPFVINQPEFMRRMKEMSATGGGGMFAMGGFPEVYHVVVNSNSPLADAILHSKDEVQKESLIKQAFDLARLSQGLLKGKELADFVKRNWEINKLAN
>NC_013162.1|WP_012796829.1|19577_20315_-|EthD-domain-containing-protein
MFKIIMFVRKKQHLSTEEFIKLWEAHSQKVINYKEALLIKDYAKTFPFQPTDEKSSTQRETLPFTFDAMGELWYESKDDFLRARNTPEGQKALADLRADELKFVDMANSVMWLGTEERIFDKLSFEVKNWTVLDEYFYLSDYAGNSVADFDKLIALFSEDITMLSADGSQMKGKTAVISFFKQFFERNKTTKHLWETIKVAENTLETHWAVSGKRKDGTFFAFKGKDTAKLNSEGKINYLKVEFL
>NC_013162.1|WP_012796828.1|18889_19462_-|alkylphosphonate-utilization-protein
MLQELKSRSGNCCELCGATENLSVYTVPPARNESTDDSLLVCGTCLSQIQNPETMDSNHWRCLNDSMWSEHRPVKIMAWRLLNRLKNEGWSLDLLNMMYLDEEELAFAQASDDHLEESEKVIHKDSNGAILANGDNVVLIKDLKVKGTSMTAKQGTVVRKITLDPENAEYIEGKVDGQQIVILTQYVKKA
>NC_013162.1|WP_012796827.1|17264_18812_-|exo-alpha-sialidase
MKQLFTIIALCFLSFGYAQKGMTFTQTQMPLATDKDNLITSFVLPIKQGTEVKELSLQFKSKKLNLSELSVYVGANAKREQATLFAKTSNLGCNTKLQGNFKATNDTLFVWISARTTQKPDLLQKLYLSKVKLITNEAKITLSNAKKEGQRFAIALRQRKQDGIECYRIPGLVTTNKGTLIAVYDNRYNNCKDLQEDIDVGMSRSTDGGQTWEPMKKVIDMGEWGGKTNRLNGVGDPAVLVDEQTNTIWVMGLWQHGLDPQTMSWWGSKSGMTPEETGQIVVVKSEDDGKTWSEPINITSQIKNPEWRLFFQGPGRGISMSNGTLVFAGQFKDKDQVPHSTIIYSKDHGKTWHVGTGAKTHTTESQVVELSDGTLMLNMRDDRNRSNYELSDNYHGRSVAVTADMGKTWVEHNTSRTALTEPNCMASIISYKDKKGKQYLFFSNPNDAKDRVNMTIKTSKDEGNTWDKLASVLLYEQAAMGYSCLTVIDNKYIGILYEGDGDLYFQKVPIKEFIK
>NC_013162.1|WP_012796826.1|15656_17126_-|IMP-dehydrogenase
MNFQDKIINEGFTYDDVLLIPNYSEVLPREVSITSRFTRNITLNVPIISAAMDTVTEAAMAIAMAREGGIGVLHKNMTIEEQAKQIRKVKRAESGMIIDPVTLPLNSKVSDAKRCMKENNIGGIPIVDANGILKGIVTNRDLRFEHDNNRPITEVMTSKNLVIANEGTSMKEAEGILQRSKVEKLPVVDKNYKLVGLITFRDIANLQEKSISNKDNLGRLRVAAALGVTTDVVDRAEALVQAGVDAVVIDTAHGHTKGVVNALKAVKSKFTDLEVVVGNIATAEAALYLAENGADAVKVGIGPGSICTTRVVAGVGYPQLSAVMSVANALKGKGIPVIADGGIRYTGDIVKAIAAGANSVMLGSLLAGTKESPGETIIFEGRKYKSYRGMGSVEAMNQGSKDRYFQDVEDDIKKLVPEGIVGRVAYKGELQESMHQFIGGLRAGMGYCGAKDIETLQAVSRFVRITTSGITESHPHNITITKEAPNYSR
>NC_013162.1|WP_009417816.1|14648_15518_-|mechanosensitive-ion-channel
MENGIVNDYINIIEVFTKKIHLWIQLFIDKTPNIVIALLVFILGFYLSRLIKKIAIRILEKRGVKPSSRIMLGNIISVLVVITFFMFSLNILDLENMFKTILAGAGVAGLAIGLALQGTLSNTFSGITLSFSKSIRIGHQIETMGYTGTIEDINLRTIKLKMADGNYVSIPNKLIVDNPMKNYSESDTANVLVTCGVGYESDLEQVKMLTETTIRQMMKQKELDTTISFYYTEFADSSINFIVYFTIPSKKLSESFLYKSEAIMAIKKCFDAHNINIPFPIRTIQMDKQ
>NC_013162.1|WP_012796825.1|13307_14636_-|potassium-transporter-KtrB
MLKKISPYNLIMLSFIGLIVVGALLLMMPFAHTPQKDISFLEALFTATSAVTVTGLSVIDIGATFTIYGKLILLVLIQFGGLGVLTISSVLVLLIAKRIGFYTKKIVAEGLNHNKSYDIYAVAKRVVYITLLFEATGALCLFISFIQEFPFGKALFFSVFHSVSAFCNAGVSLFPHSFEGYTYNVFVNIIIAFLVIFGGLGFTTIIQSYEYLRKKRRRLDINSQFSILMTIILLVAGTFLFFILEYKNYHTLYGKSFFGQMLISFFHSVSLRTAGFDTIPLEHLSSATILFCVTFMFIGASPNSTGSGVKTTTIGILFLGIKTALLNKNYIEFSKRRISWKLFNKASALVFIAMMYVITMIVILTVLEPDLEFTKIAFELISAFSTCGLSTGITSQLGNSSKFILIFTMFLGRVGPLTIALALSRPRAEGNYKYPKENILIG
>NC_013162.1|WP_012796824.1|12653_13304_-|TrkA-family-potassium-uptake-protein
MKNFLVIGLGEFGKSVAKTLYKNKATVLAIDSRESVIKQALSENIIDEAVILDATDEIALKNVVKDDFDTAFVSVGDNIQASILITLQLKELGLKNIICKAVNHTQEKVLYKIGATQVVFPEELMGEKVAYSVLRPTIIEYFKFAEDYFIYEVKVPKSYIGKSLMELNLRHKYEINILAIKHSDGKMNVTPDPNAKLSKDDLLVILSNTNVIDRIV
>NC_013162.1|WP_012796823.1|11209_12190_-|DUF3644-domain-containing-protein
MEKIRKRKMKSLKDELLIKSREAMLSAVQIFNNPNMMFKSESFIVLSNISWMYLLHAYYKKMNVDYRYYTLKNQRKKYDKTKYKAFKRWELERCLDDDSCPIDENTKHNLKFLIGLRHEIEHQMTTRIDEYLSARFQACCLNYNNYIKNLFGEQYGIDKHLSFSLQFSTINEEHLNQLRNFSDLPKNIATYINVYDEKLSDQDYNDIRYSYRVLFVPKNANHKGQADKVIEFIKKDSPEAEGLNKELILIKERERKKFLPKEIVSIINGKGYRRFRMYEHTLLWKEKDAKNPNKGFGTSVSGTWYWYENWLLEVEKYCSNNRNIFS
>NC_013162.1|WP_002672685.1|10583_11051_-|hypothetical-protein
MGNLINATLSETDKESVKTKLSEVQQLLNFLIALPADQKRGGASMGQKSVEFVNLALRGANHFPQYLLQSFNKAEFENDVHLIDQLWDIRVLVASLLEKLDDTIYAASSDAMQTANEVYTYLKTSAKKDASVKALVDEMGKRYGKKKAKNGLTDK
>NC_013162.1|WP_012796831.1|23002_25855_+|DEAD/DEAH-box-helicase
MFLFFDFSFHPTIELSLPNAYLAEKQNGYASFYKKATTEVLHSLTNFEPSESEKEALSIVNSLQPNILHQKYIKKGDSFEEIYKNTQIKKHIQQQIEEKTAELLSIIAENSLFITTNYNHKDDISKKILPISTNIIEPLLEFTKIEGGISYRLLLQEDDEKLLPCESHIELLNNSYAWIVLKGQVVRVAHIKASHLKPFLNKESTFIPEKTFPEYFEKFLKKVLRNAQVEAKGFKIITQNELKSSELDILYDFFANHYKIYIHFDYNGYTFDSNQAKNNQSNLEISPNNDIKIYNYQRNKKEETRKYRLLEQLGFVNDGGTFSVESKDPFASYFHLLHCKKDLEEAGFGFHTFSIEGGKEISEHLPELIFAETSTENDWFDLNIRVKQGENSFHFKDLIKNLKENNPIYLLPDGKAFIIPQEWFSKFGSIAKYAQIRQEKLQISKSNYALLEAVPEIKPQNLVEKVSYTPSPNLRATLRPYQIEGVEWLLQHYYNGVGACLADDMGLGKTLQTIALLVAIHDALPEKTIETADLFSGIEKSKEALKVLVILPSSLIFNWYDETKRFAPHFKCTQYVGADRKVKAKRLGNYDMVFTSYPIVERDVELFQKYEFRYIILDESQRIKNKNSKTFKAIHTLKATHRIALSGTPIENSLSDLWSQMQFINPNILKSYTSFYKNYEVEISKKKNTQALEELKTIISPFLLRRTKEQVLDDLPEMEEQIIYCPMSEAQHKWYETEKSKVRNQLLQINEPITEFNTLNMLMRLRKISLHPKLVDKESKIASGKYEEVINYMEELLQSSRKALIFSSFVSHLALYEEWCNKKGIKYAKLTGETPSFERKNQVEMFQNNPSISFFFISLKAGEVGLNLTQASYVLLLDPWWNPFSEKQAIGRAHRIEQQNKVNVIRFVSKDTIEEKIIKLQKSKTELSENIIDENHIIKEVMEQINSLLE
>NC_013162.1|WP_009421394.1|25910_26198_+|hypothetical-protein
MKIRLFKLPKNKRFNYTPRYYEGKEEGNPFEMGSRIRKDRETVTKHFTEEWRSIRSESRNRKNAGVNKTFWIVLLVLILITLYFLDFDLSIFRRH
>NC_013162.1|WP_009421325.1|26215_26440_+|hypothetical-protein
MKKTIAICVLIAVAIGLGSFYWVKQQRECKEAEYNYQVIRKGLLILSEEYNKGAEKVQYLKEYEETKNKIVKEH
>NC_013162.1|WP_012796832.1|26455_26965_+|DUF4252-domain-containing-protein
MKIKKILMLSAFWVTIAVNGQTAFEKLETNKDISTVVVSQKMFQMLSKIDSKDAEAKEFMEVANKLKGMKIFTTENKTAAGLMKTEAQQYLKTAGLSELMRVKDKAQNVKFYTKEGKDATHVSELLMLVEPTETSKQTIVLSLTGDIDLNKISVLTKNMNLPQEVKEIK
>NC_013162.1|WP_012796833.1|26972_28256_+|2-oxo-acid-dehydrogenase-subunit-E2
MARHELIFPSLGESVTEAVVTNWLKKVGDPVEAEESIVEVSTDKVDTEVPTDVSGILAEIKFQVNDVVKVGEVIAVIETQEEISTSGEKLDVVQQSVASLEKNIANIQQSTSAEPQVDFSKTERFYSPLVKNIAKKEGISLSELDSIKGTGLNDRVTKSDILDYLSHRTQGKAKPSATFDATPADKRVYTKRGEERIEMSRMGKLIAEHMLKSKLTSAHVQSFIEVDVTRIWKWRNKVKKAFEEREGEKFTFTPIFMEVVAKALVDFPMMNVSVEGDSIIKKRNINIGMATALSDGNLIVPVIKNADELSLRGMAKVVNDLANRARANALKPDEVKDGTYTVTNIGSFGTLFGTPIINQPQVGILAIGAIQKVPAVIETPEGDTIGIRYKLMLSHSYDHRVVNGALGGMFVQRVAKYLEEWDMNRVL
>NC_013162.1|WP_012796834.1|28357_30139_-|cell-division-protein-FtsZ
MNSDIQFDLPKNISNYIKVIGVGGGGCNAVNFMHNEGIKGVDYVVCNTDAQALENSPIPNKIQLGVTLTEGLGAGANPDIGEKAALESIEDIQRTLEGNTQMVFITAGMGGGTGTGAVPVIAKQAKDMGILTVAIVTTPFNYEGLKRSRQAQAGIKKLRDCVDSLIVINNNKINEIYGDLSIKESYGKANEILLKGAKGMAEVISKHYLVNIDLRDARTVLENGGTAIMGSASAEGDNRAYEAVSAALNSPLLNDNKIAGAKNALLLITYGKKEATQREVTEISSFIQEQAGDNMADLIYGIGEDESLGEAISVIVIATGFDADQQQEIVNAETKKVIHILEENQTATRDLTEPKGTVVNAINSASPISSISDIKKESSLSDLFNIWVDCEIVTAVNDEFVIVDKSIPKKNSFQTIEKKAEVQTQQSTSVKHEEPEKEAPIIHQLSEDIHKEMPQVERRKNPPVVNQEGEIRYTLEDYTELERTFIEAKPTSFTEDKNSNEFILYKKEEDSKSKTSPSSGQLDMFAEEEDIESSLNPIDSRISDVMKRSRSNRLQDYNYKFGSNNQSRTSMGKDSAGEMQIRKNNSYLHDNVD
>NC_013162.1|WP_012796835.1|30168_31596_-|cell-division-protein-FtsA
MKYNKYYVGLDIGTTKIVTMVGAKNEYGKIQILGYGQSKSEGINKGVVTNIAKTTQSIMDAIQDAKEKTGLEIENVEAGIAGQNIISRSHSDYITRTDPEQLIDFDDLERLKEQVFSIALSPGQKIIHALPQDYKVDNVGDIKEPIGMMGTRLDATFHLVIGQVSAIKGITRCVEMAHLKPIGLTLEPIASAKAVLSEEEKDAGVVLVDIGGGTTDVAIFKDGIIRHTAVVPLGGNIITDDIKEGCGILTRQAEMLKVEFGSAWPGENRDNEIVSIPGIKGKEPKEITLKNLSKIIHARVSEIINLVFNVIKNYGHEETKKKLFAGVVLTGGGSQLKHIVQLVEYITGMDARIGYPNEHLAGNSDPKLTSPIYSTAIGLVMSAIENEAEEQFKKRFQEVKAQETIENGKGVVVEPLSADLQDSSLEKQPITIVDSPKINVFQDKDEDDELEIHKTSRGWWSKLNEKLKDFLDSED
>NC_013162.1|WP_012796836.1|31847_32585_-|3-deoxy-manno-octulosonate-cytidylyltransferase
MKLIAMIPARYGATRFPAKLMQDLCGKPVIVHTYERVADTRLFDEVYVVTDDDRIEKVIREVGGKVIRSKKEHNSGSDRLAEASRDLDVDIIVNVQGDEPFTDKENLQKVIDIFAKDLTKSIAVASLMERIIDPDDIANPNNVKVVVNKFGEALYFSRNIIPFPRDPNTKVSYYKHIGIYAYRKEALQQFTELPPSLLEETEKLEQLRYLENGFKIRLALTDIPTIGIDTPEDLERARKRLITQK
>NC_013162.1|WP_012796837.1|32587_33031_-|hypothetical-protein
MIYLVVYFICWLLAVVLYTFSFDESFVYTALYTHLVYGVGFFGLFNFVGHSVLSEKVAKTIGWVSNGFQKELGFVSLGIGICGILCHWFRDGFWLATAIPFSVFLIGAALLHIAEMKRKHNFNKGNVWIILPDLLMPLTLLILFILN
>NC_013162.1|WP_002672717.1|33110_34463_-|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MFKKILIANRGEIALRVIRTCREMGIKSVAVYSTADADSLHVRFADEAVCIGPPPSKDSYLKIPNIIAAAEITNADAIHPGYGFLSENAKFSKICAEHGIKFIGASPEMIEKMGDKASAKATMKAAGVPTVPGSDGLVESLEHAKKIAAEIGYPVMLKATAGGGGRGMRDVWKEEDLEKALNSAMQEAGAAFGNDAMYMEKLIVDPRHIEIQIVGDQYGKACHLSERDCSIQRRHQKLTEETPSPFMTDDLRKRMGEAAVKAAEYIKYEGAGTVEFLVDKDRNFYFMEMNTRIQVEHPITEQVIDYDLIREQILVAAGVPISGKNYTPKLHAIECRINAEDPYNDFRPSPGKITTLHAPGGHGVRLDTHVYSGYVIPPNYDSMIAKLITTAQTREEAIAKMKRALDEFVVEGVKTTIPFHLQLMDDPDYLAGNYTTKFMEDFQMKPQVAE

Crispr_ID: NC_013162_2

• CRISPR_ID: NC_013162_2
• CRISPR_location: 503905-504005
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013162_2

Consensus_repeat	Method
ACATACTCTCCTATTTGGAGACT	CRISPRCasFinder

spacers of NC_013162_2

>2.1|503928|55|NC_013162|CRISPRCasFinder
TCTCCCAAGGAGAGGGGGAATGTAGTGACGGAGAAGGGGAATCCTCACCCCGATT

CRISPR arrays and Neighbor proteins around NC_013162_2

CRISPR arrays

The CRISPR arrays of NC_013162_2

>merge|NC_013162|2|503905-504005|CRISPRCasFinder
ACATACTCTCCTATTTGGAGACTTCTCCCAAGGAGAGGGGGAATGTAGTGACGGAGAAGGGGAATCCTCACCCCGATTACATACTCTCCTATTCGGAGACT

>NC_013162|2|1|503905-504005|CRISPRCasFinder
ACATACTCTCCTATTTGGAGACT	TCTCCCAAGGAGAGGGGGAATGTAGTGACGGAGAAGGGGAATCCTCACCCCGATT
ACATACTCTCCTATTCGGAGACT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_015781713.1|500283_501279_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223318
NC_013162.1|WP_015781708.1|495135_495975_+|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_013162.1|WP_015781707.1|494598_495123_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NC_013162.1|WP_009419228.1|501379_501964_+|riboflavin-synthase	unknown	unknown	gnl|CDD|236455
NC_013162.1|WP_009417788.1|504392_504857_+|DinB-family-protein	unknown	unknown	gnl|CDD|378981
NC_013162.1|WP_015781711.1|498474_498702_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015781710.1|497216_498437_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|182528
NC_013162.1|WP_015781722.1|512432_514577_-|S46-family-peptidase	unknown	unknown	gnl|CDD|371067
NC_013162.1|WP_015781709.1|496011_496995_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223999
NC_013162.1|WP_167524719.1|512208_512373_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015781717.1|505926_507336_+|alkaline-phosphatase	unknown	unknown	gnl|CDD|293736
NC_013162.1|WP_015781714.1|501950_502691_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl|CDD|153251
NC_013162.1|WP_015781716.1|504853_505906_+|thiamine-phosphate-kinase	unknown	unknown	gnl|CDD|100030
NC_013162.1|WP_015781719.1|508486_509626_+|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl|CDD|133463
NC_013162.1|WP_009410398.1|514618_515305_-|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|224527
NC_013162.1|WP_015781721.1|510628_512095_+|RNA-polymerase-factor-sigma-54	unknown	unknown	gnl|CDD|235648
NC_013162.1|WP_015781712.1|498698_499694_+|histidine-kinase	unknown	unknown	gnl|CDD|225814
NC_013162.1|WP_015781715.1|502982_503426_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015781718.1|507367_508351_+|cation-transporter	unknown	unknown	gnl|CDD|223131
NC_013162.1|WP_015781720.1|509660_510593_+|sugar-transferase	unknown	unknown	gnl|CDD|274398

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_015781713.1|500283_501279_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl|CDD|223318	COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	1.67972e-96
NC_013162.1|WP_015781708.1|495135_495975_+|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	0.00803808
NC_013162.1|WP_015781707.1|494598_495123_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.11325e-07
NC_013162.1|WP_009419228.1|501379_501964_+|riboflavin-synthase	gnl|CDD|236455	PRK09289, PRK09289, riboflavin synthase.	2.61551e-97
NC_013162.1|WP_009417788.1|504392_504857_+|DinB-family-protein	gnl|CDD|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	9.21088e-19
NC_013162.1|WP_015781710.1|497216_498437_+|ABC-transporter-permease	gnl|CDD|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	5.66096e-91
NC_013162.1|WP_015781709.1|496011_496995_+|alpha/beta-hydrolase	gnl|CDD|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	7.4797e-41
NC_013162.1|WP_015781717.1|505926_507336_+|alkaline-phosphatase	gnl|CDD|293736	cd16012, ALP, Alkaline Phosphatase. Alkaline phosphatases are non-specific membrane-bound phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity. Mammalian alkaline phosphatase is divided into four isozymes depending upon the site of tissue expression. They are Intestinal ALP, Placental ALP, Germ cell ALP and tissue nonspecific alkaline phosphatase or liver/bone/kidney (L/B/K) ALP.	1.75444e-92
NC_013162.1|WP_015781714.1|501950_502691_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl|CDD|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.00601e-40
NC_013162.1|WP_015781716.1|504853_505906_+|thiamine-phosphate-kinase	gnl|CDD|100030	cd02194, ThiL, ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine. Thiamine salvage occurs in two steps, with thiamine kinase catalyzing the formation of thiamine phosphate, and ThiL catalyzing the conversion of this intermediate to thiamine pyrophosphate. The N-terminal domain of ThiL binds ATP and is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, FGAM synthase and selenophosphate synthetase (SelD).	6.16196e-116
NC_013162.1|WP_015781719.1|508486_509626_+|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl|CDD|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	7.36025e-63
NC_013162.1|WP_009410398.1|514618_515305_-|TIGR00730-family-Rossman-fold-protein	gnl|CDD|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	2.22095e-58
NC_013162.1|WP_015781721.1|510628_512095_+|RNA-polymerase-factor-sigma-54	gnl|CDD|235648	PRK05932, PRK05932, RNA polymerase factor sigma-54; Reviewed.	1.52618e-125
NC_013162.1|WP_015781712.1|498698_499694_+|histidine-kinase	gnl|CDD|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	7.32526e-33
NC_013162.1|WP_015781720.1|509660_510593_+|sugar-transferase	gnl|CDD|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	2.4151e-87
NC_013162.1|WP_015781718.1|507367_508351_+|cation-transporter	gnl|CDD|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	2.62861e-60
NC_013162.1|WP_015781722.1|512432_514577_-|S46-family-peptidase	gnl|CDD|371067	pfam10459, Peptidase_S46, Peptidase S46. Dipeptidyl-peptidase 7 (DPP-7) is the best characterized member of this family. It is a serine peptidase that is located on the cell surface and is predicted to have two N-terminal transmembrane domains.	0

Protein sequences

>NC_013162.1|WP_015781715.1|502982_503426_-|hypothetical-protein
MYQLIKQTHSLCAYLVLAVLIIAVINALMGFFGKRKYFGIKDLRLSLFALVFSHIQLLLGLLVYVTTPRLQMWREGAKVVMKDSLLRQLLVEHPIMNIIAVTLITVGWVKLKKQTEVRKMYGKIALFYGIALVCLLSMIPWKLWWSV
>NC_013162.1|WP_015781714.1|501950_502691_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MKLLKYTFWLLWKSWFYFLVLILILLWLPLLFILTARTEWYRSFYWVARNLWATPILYGMGFLPKIHREYTVPNDRHSYMLVANHYSMMDIMLMFYCSKNPFVFVGKKELSKTLLFGYFYKRVAIMVDRKSPQSRKEVYAQAMERIKAGLSICIFPEGGVPDDESIVLDSFKDGAFRIAIECQIPIVPMVFYDTKKRFPFRFFAGSMGTMRVDILRSIPTQGKTLDDKESLREEVRSLILQRLTVA
>NC_013162.1|WP_009419228.1|501379_501964_+|riboflavin-synthase
MFTGIIEEIGKIVQIEREEANLHLYVKSSFTNELKIDQSVAHNGVCLTVVAIDGDVYRVTAIAETLAKTHLGSLQVGDAVNLERGMLLNTRLDGHIVQGHIDQTGTCSAIQEEAGSTRFTFEYDPSTGNVVIEKGSITVNGVSLTVIDATSHSFSVAVIPYTLAHTNLQYLQIGSVVNLEFDVIGKYVARLMQR
>NC_013162.1|WP_015781713.1|500283_501279_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
METKISVIGGGSWATALIKIFTANIDQVCWYMRNEQAIEHIKATKHNPNYLSDVHLNISKLHLTNDINEAVAFSDYVVFSIPSAFLSDELEKLTEPLSNKNIFSAIKGIEPKSGLIVGEYFNKIHHVPYAQIGVIAGPCHAEEVALERLSYLTIACLDEEKAHFMAEAMKRHYVKTKISDDVVGIEYAAMLKNIYALAAGIAHGLGYGDNFQSVLMSNAIREMRRYIKHIYKIKRNINNSAYLGDLLVTAYSLFSRNRMFGTMIGKGYTVKSTMAEMNMVAEGYYATKSAYLINKNQEKPSRTPILDAVYKVLYEGKRANVAFAELTGELD
>NC_013162.1|WP_015781712.1|498698_499694_+|histidine-kinase
MKFLTHIAAWAVVCILPALIFISESNHRFEEALYRSLISLPFLMFLFYISFYWLIDKLWFKKRYILFILVAVALILCISYSKYELFSYFNLHKGKHKMPPFHAFVYFDFLSNLLPVVFAMAIRYAQRNFSLEIGQKEAQAHKLQADLTQLKYQLQPHFFFNALNNIYSLIAFDPQKAQQSVHSLSKLMRHFMQNSDQKQISLAEEVDFLQQYISLMQLRLTDKTTVRVDFPKQLPPLTIAPLLFISLVENAFKHGVSATEVTELSFSLRVEENKVIFRSENTIIPKQESLYNSGIGIENLKKRLTLLYPKKHQYNIEEKNGEYIAQLTIEN
>NC_013162.1|WP_015781711.1|498474_498702_+|hypothetical-protein
MNITLPPYATTEDLQKCMVIVREILDSKAITINDEQCQAIALEVMGISYAKGGDYSPEIIKSFAESYLKTSKYKE
>NC_013162.1|WP_015781710.1|497216_498437_+|ABC-transporter-permease
MNIQNLFKIAWRALLLNKTRAMLTMLGIIIGVGSVITMLAIGEGSKKSIKENISKMGTNMLNIRPGAGMMGGVRMSMSDMQSLKMTDYEALKKEGTLLKYVSPVVSGNGQSIAGGNNWPTSIYGVNTEYLPIREWSVAEGSMFGEDEITNFSKVAVIGQTVAKNLFTNGENPIGQTIRFKNIPFKVIGILTKKGESNFGQDQDDVIIAPYTTVQKRILAQTFLQSIVASVLNESQSENAVNQVKKILERTHNLSATQENDFNVFSQQELISTFSSTSEMLTVLLVAIASISLIVGGIGIMNIMYVSVKERTKEIGLRMAIGAKGKDILAQFLIESVLISITGGVLGVIIGLLATVGVSLFIGWPVSITLYSIVISFLVCTITGVFFGWYPARKAAELEPISALRYE
>NC_013162.1|WP_015781709.1|496011_496995_+|alpha/beta-hydrolase
MNKNTKTPVNAASWDKIFPKSDKVEHKKVSFKNRYGITLIGDLYFPKNSEDKKLAALAVCGGFGAVKEQASGFYAQTMAERGFVTLAFDPSYTGESGGKPRNVASPDINTEDFSAAVDCLGIQPFVDREKIGIIGICGWGGFALNATAIDTRIKAVATMVMYDMSRVFSKGYFDANTPEMRLEMKRSLNAIRWKDAETGTPSPGYPMPHAPSDKVPQFLNDYIEFYKTPRGFHERSVSNHVWTATTLLSFMNFPLLAYANEIEVPTLMIAGENAHSRYMSEDAYKLIGSEKKELLIVPNARHTDFYDNQAGVIPFDKLEAFFSEHLQ
>NC_013162.1|WP_015781708.1|495135_495975_+|CPBP-family-intramembrane-metalloprotease
MRTNKKTLRNVILFSLVAISCGWIGIGVNQLLGEPSNLESLGSGIFIVTPIVCMILLRLFGGDGWKDFPLKPRFKQNTRWYIFAIAVYPVVVGITMFVGKLLGWVDASKFSVAAYLPVFATAFLPIFIKNILEETAFRGYLTVKMEQLVKNEWLIYLVVAFVCQIWHLPYNLIFLDDAYMATFFPYSKELFVLVSFVVIAVWTIMYTEIFFLSRSLLLVILMHSMKDALNPLISEGFTIISADKTLLVSPLFGLIPTLMYLAIGLYLRRIRKSKERLHS
>NC_013162.1|WP_015781707.1|494598_495123_+|TetR/AcrR-family-transcriptional-regulator
MPKSTTITQEVIIGTAFEMVRKEGFAVLSARNIAKQIGCSTQPIYWCYKNMDDLKAEICKKALPFLQSVVLSYSKTGNTLLDLGLGYVWMAHTEPALFKAFYMDNVTNVKLTDIFPESERVVEIMKNSEEYQNLPDEELKNDIAKGWMLAHGIASLVAVGMLVYDEDKILEILK
>NC_013162.1|WP_009417788.1|504392_504857_+|DinB-family-protein
MTEQVFALHVATRNNLLTYLENVSPEQLAQIPTGFHNNIWWNIAHCVAQQQILCYKLSGLNFVVPETFVDTYKKGTYPDGHIPTAEEIQELRSLLISTQKQLQADYERGVFTNFTPYTTSYGYALTCIEDAIHFNNTHEGMHLGVVIALNYFAK
>NC_013162.1|WP_015781716.1|504853_505906_+|thiamine-phosphate-kinase
MIEDKTPHRTSLADLGEFGLIDRLTKGFEIHNPSTLKGVGDDAAVMDFKNKKTVVSTDLLIEGVHFDLSYVPLKHLGYKSVVVNVSDIYAMNATATQITVSIAVSNRFPLEALEELYAGIRLACKHYKVDLVGGDTTSSTRGLIISVTAIGEAEASDLVYRNGAQPNDLVVLTGDIGGAYMGLQILEREKAVFQVNPNSQPDIEMYSYILERQLKPEARKDIPPLLKQLGVKPTAMMDVSDGLSSEILHICKQSGVGCRLYEDKIPLDPQVISTCEEFNLDSTTIALSGGEDYELLFTIAQADYDKIKGNPNFTVIGYITDKSEGVNLVTRAGQFIPIIAKGWNALTINN
>NC_013162.1|WP_015781717.1|505926_507336_+|alkaline-phosphatase
MKRRAFFKRGALAALGGLVLPSFDLQAQTLGEAHKNKRTKNIIFMVSDGMSFGTLVMADLYLKRKFGRPSSWIGLYESNLAQRAVMDMASASSVVTDSSAASSSWGGGVRVKNGSLNISPDGKENMPILQKFKKAGKKVGCITTVMVNHATPAGFCTWSKSRNAMDEIALNYTELGFDVMLGGGSKYFDPAHRKDKKDLFAVLKKKGYTVARTRGEMLKAPTNKPLYGLFAEDALPYSIDRAQSSEEQAKSPTLAEMTAKAIDQLKSHPNGFVIQVEGGKVDWAAHGNDIGALLYDQVAFDEAIKVALDFAKADGNTLVVLTSDHGNANPGLIYGKECNNNFDRLQNFTHSNDWILQQINSNDSVAKVREHVAQYCGGMNISEEQAKELLSYYAKTERKEDGLYNYKHLPYRLFAEIQKAHTSVGWISMDHSSDYTELAMYGPGSERLKPFMRNTDMHNFLLEAAEVRV
>NC_013162.1|WP_015781718.1|507367_508351_+|cation-transporter
MKSFQFQKLVTFIGILLFIVKLIAWYITNSNAIFSDTMESIVNIIAAFMGLYSLYLCNKPRDTDHPYGHGKVEFVTAGIEGMLIAIAGVLILIEAFSSLIKGIHLDKLGWGIALFGSTAIVNYAMGYISYKKGKKENSLVLMSAGKHLQSDTFATSAIVLSLLLVHFTGWLWLDPLIAIGFGSYIIVIGWKIVRKALSGIMDERDEALFAELVNILQANRKTEWIDIHNMRIQQFGAHLHIDAHITLPYYYSLKEAHQEMEKVIHLLAEKVDRTIEFNFHLDYCKPFSCEICAIDCQFRQKPFVRTIQWDVKNIAGVAKHRYEPLKQ
>NC_013162.1|WP_015781719.1|508486_509626_+|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MIITFFSENLGFTAVCVFLVSLGVAYFSLPSIIYVSKYKNLMDKPNVRSSHKEKTPTLGGISFFVSLVFTLFLLRPFDNDSVGINILSGVGVLFFVGLKDDLTGVTPSTKIIGQIIATLILFFGSGLKITTFNNFLGITDIPYWFSILISCAIVMAIVNSYNLIDGINGSAAMVGIVIFGAFAYIFYDTQLYYYFLLSILCIGFLLAFLRYNLSVKKRVFMGDTGSMITGFLIAVLAIKFFTLKTEALESAIIHPTNKIWVLLAIIFIPFFDTTRVFTTRLLRHRRPFKADRSHIHHVMIDYMKLSHSQASLLLATINLIVFLVILLLNTRLSPLMLGVLFVAFSIGLATFLFIVNRDYHNLKNKQKIRHIINEIHKKN
>NC_013162.1|WP_015781720.1|509660_510593_+|sugar-transferase
MKIFNHRPTCLFINVGGILEKLLEESNVSKFYRIIKYDISKKKRTISSIVNKLKIVIIVIETSKIKEYPDNIIREIIDLRTKGIIVYEAEEFYENINKRIPIVKLEAKKYIGDDIFSIKQRIRHRLIKRVFDLTLVLLALPIALPLTIVGVILTLLSSKGGAFFAQTRVGREGKTFKIYKIRTMVLNSGGFTQVNDSRITPIGKILRFTKIDELPQLYNVLRGDMSIIGPRPEIPEYVEKYAEQIPFFKLRHMVKPGVTGWAQIHIPKATPEDSIKKLEYDLYYIKRYSLSLDIKIVLETAKIVLTLNSN
>NC_013162.1|WP_015781721.1|510628_512095_+|RNA-polymerase-factor-sigma-54
MLKQNLQLKLSQKLSPQQIQLMKLVQLPTLAFEQRVKQEMEENPALESGREEDALDEFHDEFDNSADEYNDNDVIDMDDINIDEYLSDDEIPDYRLHANNYSDDDEDRDIPFSAEVSFHQSLINQLNTFTLSDEDYLIAEFLVGSIDDTGYIRRSIQDLTDDLAFTQNIYTEEEHVEQIRQQIIFQLDPAGVGAADLQECLLVQLRRKKQTLAIGLAIEMLTEAFEAFTKKHYAKLQQRFLVTEEQLKEAVQEVERLNPKPGSSYVGNNVHIEQIIPDFTVKVVDNELELSLNGRNAPELHVSKEYSTMLDTYKKSKEKSNSQKEAVFFIKQKLDSAKWFIDAIRQRQQTLLITMDAIMEHQREYFLTGDELKIKPLILKDIADKVGMDISTVSRVASSKYVTTPYGTKLIKDFFSESMKNDQGEDVSTREIKQILQHIIAKEDKSKPLPDDELAQLLKERGYPIARRTIAKYREQMDIPVARLRKEL
>NC_013162.1|WP_167524719.1|512208_512373_-|hypothetical-protein
MKNYPKNTGEYQSKENALINKDKGFYYYKVGNKEIAAMYISHPLAPNFDYQTGV
>NC_013162.1|WP_015781722.1|512432_514577_-|S46-family-peptidase
MKKFISLLLFSFYLLPVTLTAQQGGMWIPSLLEGMNAREMKSLGMKMSVSDIYSVNKSSLKDAVPHFNGGCTAEMISDKGLLLTNHHCGYGQIQAHSSVQNDYLTDGFWAKNLSEELPNKNLEVTFIVRIEDVTQKVLADTQNLSSESVRASQIERNIASLVKNSPKEAWQENRVRAFYEGNHYILFVVETFKDVRLVGAPPSAIGKFGSDTDNWVWPRHTGDFSLFRVYADKNNRPAAYSKDNVPYRPKHFFPISLKGVKAGDFTMVFGYPGRTEEYLPAVAVEQIVNVLNPAKIGIRDVVLKVQDGFMRNSNEIKIKYASKYASVANYWKKWIGETQGLKKSDAVAIKRAQEQKFQKEIEKAGKTAEYGYILPQFTEKYAQIQNYALAVDLFSELVQRNIDLLANGYKILQLQNALHEKGTQSFNDRKKTLLNNFETVFKNYDVNVDKAVFEKAVVYYAQAMPKTLLSPNLQQFEIHTLADKLYKESFLASKTEMGKVLNLPDEAFERRLKNDIGVQFVQQIVAHFYGTVVPTYRQLDSEITTLQRTYMKAILEFSKPQDRIFPDANSTLRVTYGKVAGYSPSDAITYDYMTYLDGVMEKYVPNDYEFNVPAKLRELYEKKDYGIYGKNGKMPVCFIATNHTTGGNSGSPAIDAQGNLIGLNFDRVWEGTMSDIHYDPKICRNIMVDIRYVLFIIDKYAGAGYLLNEMKIVK
>NC_013162.1|WP_009410398.1|514618_515305_-|TIGR00730-family-Rossman-fold-protein
MKKHSKVWNETKTHDAWSIFKIMGEFVHGYEQMSSIGPCVCIFGSARIKPETPYYELTVRIAQKIVDEGFGIITGGGPGIMEAGNKGAHLNKGVSAGLNIDLPFEQTNNSYIDHDKNIKFNYFFARKVMFVKYSKAFVAMPGGFGTLDELFETLTLVQTYKIDKIPIILVGTDYWSGLVDWIKKILLEKFNNISAEDLDLFHLVDTEDEVIKVIEDFYNNKQQLKPNF

Crispr_ID: NC_013162_3

• CRISPR_ID: NC_013162_3
• CRISPR_location: 709244-709669
• Repeat_type: NA
• Spacer_info: 5 spacers
• Cas_protein_info: cas9,WYL

Consensus repeat of NC_013162_3

Consensus_repeat	Method
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC	PILER-CR
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACA	CRISPRCasFinder

spacers of NC_013162_3

>3.1|709290|30|NC_013162|PILER-CR
TCTTTTGCGACGTATTCATATTGAGGACGG
>3.2|709366|30|NC_013162|PILER-CR
GTTTTCCATTTTTCTTTAATTTTATTTATA
>3.3|709442|30|NC_013162|PILER-CR
CATTGATGATTTGAGTCGTTATGAAAGTTC
>3.4|709518|30|NC_013162|PILER-CR
GGACTCTCAAGACTTCCTACGCTCAGCTTT
>3.5|709594|30|NC_013162|PILER-CR
TAATTGATGTTGGACTCTCTCGTTAGTACA
>3.6|709288|32|NC_013162|CRISPRCasFinder
ACTCTTTTGCGACGTATTCATATTGAGGACGG
>3.7|709364|32|NC_013162|CRISPRCasFinder
ACGTTTTCCATTTTTCTTTAATTTTATTTATA
>3.8|709440|32|NC_013162|CRISPRCasFinder
GCCATTGATGATTTGAGTCGTTATGAAAGTTC
>3.9|709516|32|NC_013162|CRISPRCasFinder
ACGGACTCTCAAGACTTCCTACGCTCAGCTTT
>3.10|709592|32|NC_013162|CRISPRCasFinder
ACTAATTGATGTTGGACTCTCTCGTTAGTACA

CRISPR arrays and Neighbor proteins around NC_013162_3

CRISPR arrays

The CRISPR arrays of NC_013162_3

>merge|NC_013162|3|709244-709669|PILER-CR,CRISPRCasFinder
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCTATTGATAACAACTCTTTTGCGACGTATTCATATTGAGGACGGGTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAACGTTTTCCATTTTTCTTTAATTTTATTTATAGTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAGCCATTGATGATTTGAGTCGTTATGAAAGTTCGTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAACGGACTCTCAAGACTTCCTACGCTCAGCTTTGTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAACTAATTGATGTTGGACTCTCTCGTTAGTACAGTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC

>NC_013162|3|1|709244-709669|PILER-CR
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCTATTGATAACAAC	TCTTTTGCGACGTATTCATATTGAGGACGG
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC	GTTTTCCATTTTTCTTTAATTTTATTTATA
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAGC	CATTGATGATTTGAGTCGTTATGAAAGTTC
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC	GGACTCTCAAGACTTCCTACGCTCAGCTTT
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC	TAATTGATGTTGGACTCTCTCGTTAGTACA
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC

>NC_013162|3|2|709244-709667|CRISPRCasFinder
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCTATTGATAACA	ACTCTTTTGCGACGTATTCATATTGAGGACGG
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACA	ACGTTTTCCATTTTTCTTTAATTTTATTTATA
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACA	GCCATTGATGATTTGAGTCGTTATGAAAGTTC
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACA	ACGGACTCTCAAGACTTCCTACGCTCAGCTTT
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACA	ACTAATTGATGTTGGACTCTCTCGTTAGTACA
GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_009411577.1|708176_708428_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl|CDD|225170
NC_013162.1|WP_015781846.1|702235_703027_-|glycoside-hydrolase-family-16-protein	unknown	unknown	gnl|CDD|185693
NC_013162.1|WP_015781860.1|727327_728017_-|hypothetical-protein	unknown	unknown	gnl|CDD|380191
NC_013162.1|WP_009419202.1|707705_708092_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015781862.1|731047_732343_-|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl|CDD|238950
NC_013162.1|WP_015781849.1|704353_705802_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_041546906.1|714228_714681_-|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl|CDD|376833
NC_013162.1|WP_009420809.1|700442_701654_+|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl|CDD|182964
NC_013162.1|WP_049757007.1|716540_716750_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015781845.1|701709_702222_-|adenylate-kinase	unknown	unknown	gnl|CDD|379324
NC_013162.1|WP_015781844.1|697959_700443_+|zinc-dependent-metalloprotease	unknown	unknown	gnl|CDD|379818
NC_013162.1|WP_015781861.1|728127_730839_-|TonB-dependent-receptor	unknown	unknown	gnl|CDD|366183
NC_013162.1|WP_015781851.1|708670_709108_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015781858.1|723680_725285_-|L-lactate-permease	unknown	unknown	gnl|CDD|224535
NC_013162.1|WP_015781854.1|715196_716093_-|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_013162.1|WP_015781848.1|703704_704226_-|DUF3127-domain-containing-protein	unknown	unknown	gnl|CDD|378639
NC_013162.1|WP_015781859.1|725447_727277_-|hypothetical-protein	unknown	unknown	gnl|CDD|236140
NC_013162.1|WP_015781847.1|703032_703701_-|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl|CDD|234720
NC_013162.1|WP_015781852.1|709755_714036_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|375967
NC_013162.1|WP_015781856.1|717179_717938_+|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_013162.1|WP_015781854.1|715196_716093_-|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	8.5e-31	102.0	1.0
NC_013162.1|WP_015781852.1|709755_714036_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	4.3e-62	205.3	63.4

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_009411577.1|708176_708428_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl|CDD|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	9.26526e-06
NC_013162.1|WP_015781846.1|702235_703027_-|glycoside-hydrolase-family-16-protein	gnl|CDD|185693	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.	8.90217e-67
NC_013162.1|WP_015781860.1|727327_728017_-|hypothetical-protein	gnl|CDD|380191	NF033187, internalin_J, class 1 internalin InlJ. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin J (InlJ).	0.00012326
NC_013162.1|WP_015781862.1|731047_732343_-|tRNA-lysidine(34)-synthetase-TilS	gnl|CDD|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	3.04457e-70
NC_013162.1|WP_041546906.1|714228_714681_-|D-tyrosyl-tRNA(Tyr)-deacylase	gnl|CDD|376833	pfam02580, Tyr_Deacylase, D-Tyr-tRNA(Tyr) deacylase. This family comprises of several D-Tyr-tRNA(Tyr) deacylase proteins. Cell growth inhibition by several d-amino acids can be explained by an in vivo production of d-aminoacyl-tRNA molecules. Escherichia coli and yeast cells express an enzyme, d-Tyr-tRNA(Tyr) deacylase, capable of recycling such d-aminoacyl-tRNA molecules into free tRNA and d-amino acid. Accordingly, upon inactivation of the genes of the above deacylases, the toxicity of d-amino acids increases. Orthologues of the deacylase are found in many cells.	9.09612e-89
NC_013162.1|WP_009420809.1|700442_701654_+|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl|CDD|182964	PRK11102, PRK11102, Bcr/CflA family multidrug efflux MFS transporter.	0
NC_013162.1|WP_015781845.1|701709_702222_-|adenylate-kinase	gnl|CDD|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	6.11825e-06
NC_013162.1|WP_015781847.1|703032_703701_-|leucyl/phenylalanyl-tRNA--protein-transferase	gnl|CDD|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	3.34445e-115
NC_013162.1|WP_015781861.1|728127_730839_-|TonB-dependent-receptor	gnl|CDD|366183	pfam00593, TonB_dep_Rec, TonB dependent receptor. This model now only covers the conserved part of the barrel structure.	4.21026e-10
NC_013162.1|WP_015781858.1|723680_725285_-|L-lactate-permease	gnl|CDD|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	1.19528e-144
NC_013162.1|WP_015781844.1|697959_700443_+|zinc-dependent-metalloprotease	gnl|CDD|379818	pfam16313, DUF4953, Met-zincin. This is a family of uncharacterized proteins that carry the highly characteristic met-zincin mmotif HExxHxxGxxH, the extended zinc-binding domain of metallopeptidases.	2.58887e-134
NC_013162.1|WP_015781848.1|703704_704226_-|DUF3127-domain-containing-protein	gnl|CDD|378639	pfam11325, DUF3127, Domain of unknown function (DUF3127). This bacterial family of proteins has no known function. However, it does show distant similarity to pfam00436, with proteins such as Prevotella buccalis HMPREF0650_0099 being similar to both families. This suggests that this family may have a DNA-binding function.	5.36107e-38
NC_013162.1|WP_015781859.1|725447_727277_-|hypothetical-protein	gnl|CDD|236140	PRK08026, PRK08026, FliC/FljB family flagellin.	0.00420804
NC_013162.1|WP_015781854.1|715196_716093_-|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	4.4676e-23
NC_013162.1|WP_015781852.1|709755_714036_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|375967	pfam18541, RuvC_III, RuvC endonuclease subdomain 3. Cas9 proteins are abundant across the bacterial kingdom, but vary widely in both sequence and size. All known Cas9 enzymes contain an HNH domain that cleaves the DNA strand complementary to the guide RNA sequence (target strand), and a RuvC nuclease domain required for cleaving the noncomplementary strand (non-target strand), yielding double-strand DNA breaks (DSBs). The crystal structures of type II-A and II-C Cas9 proteins highlight the features in Cas9 enzymes that support their function as RNA-guided endonucleases. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. The RuvC domain forms the structural core of the nuclease lobe, a six-stranded beta sheet surrounded by four alpha helices, with all three conserved subdomains (I, II, III) contributing catalytic residues to the active site.	7.31914e-58

Protein sequences

>NC_013162.1|WP_015781851.1|708670_709108_+|hypothetical-protein
MKKSVQIFLELISAIAIYLFINSIAYGDHLVTLPLYLTGVVIMSYLFVRERPQQKWGSFLRVVSPFAVLMLIAGSLQDANTSLALGYIASTAVAFLLGMCIATVSKTYQKIGLSALAFLLVVAVRLSFSAEFQYLIGVHWYTLGR
>NC_013162.1|WP_009411577.1|708176_708428_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGIIATLIIGAIAGWLGGTIYKGSGLGLIGNIIIGILGSIVGYWLLGDVFHVSLGGGWIGAILTGAIGAIVILFLINLIFKKK
>NC_013162.1|WP_009419202.1|707705_708092_+|hypothetical-protein
MKKIIALVSVICLSLVAFSSISCSKNDDPADNDLFVGTYKGKISYSNGDEKKSADNGAVTVVKTGNDYYFRFSDGIPDLKGVSFKKEGDNTLVNIDLKDGVKLIRINASSLNILYTTDGKTWTANASR
>NC_013162.1|WP_015781849.1|704353_705802_-|hypothetical-protein
MNKMKCLFLIGVLSVMNVCAQDFKVKKGELLSNGTPVAKIEKKDGKYQFSDLSNHLLYRVVLTAETAQGNLAPHRWIEFSNANGVIREVAIPDKLKFTFSGEKYLLDCVFKSGTGMLTEKGIDPAVVTAFFESTHRPFSEKWDAVFEQERNTIQTEDNLATADKISVQGDAILKNGKQIGIIVRKVQNGDGGIVITDFTVTDIKGHVVATAHHHSYKNEDYFVIKTYDQKEFPVFVPLTKIGVADKRIVNRLYANGYPFGDMTEAFSQYLEGRKNAIDQQNKEMLEEAKKQTVNIYDAPGYVIDAKGDKKEGLITIEFQSVGAILNKEQNVSDLTSYGATMKFKKEGEKDAYFKAKDGVKFCIDERCFIGSKSAEDGFFAHGGSQLNVLSGAAQFFEILYDNNGNYVLVHSKYPEDYYLKIKGADKAVYLGDKATFGSKSADKIQKILAKYINCPSLDVTKYNTKTKEGMIQLVDDYTKTCK
>NC_013162.1|WP_015781848.1|703704_704226_-|DUF3127-domain-containing-protein
MEIQGRIIKISPTQTVGQNGFQRRDVVISTEEQYPQYIPFDFVQEKCVLLDNFQVGQLVRISFNIRGREWVNPQGETKYIVNLQGWRIENAEVAQGAYPPPQGQYPPQGQPAYPPQGYAQPQYQQAPPQYQQAPPQYQQTPAQYPPQAPQQAFSAPDPAQGASAPTEEDDLPF
>NC_013162.1|WP_015781847.1|703032_703701_-|leucyl/phenylalanyl-tRNA--protein-transferase
MIYLTNDKTSFPSPDTASEEGIVALGGNLTPERLIEAYSEGIFPWYNEGEPVVWWCPDPRFVLFREKLHISKHMRKMLREAPYRVTYNHCFTEVMRQCATVPRKDQDGTWIHPELIEAYTGLHKRGIAHSVEVWEGDVLIGGLYGLKMGKIFCGESMFSKRNNASEYGFITYLQAHPDIALVDCQIYSEYLERLGAEEIPRKEFLALLGKAYEERENEKIIT
>NC_013162.1|WP_015781846.1|702235_703027_-|glycoside-hydrolase-family-16-protein
MNMKPFTLLLFTLALMSWGCSKKEEVNEKPWKLVWEDNFDRNDIFSTGVWTKMNRWGDNCCNTMSKDPSLFEIKDGKMILLGVTNKDLKKDPSPYLTAGVWTKEKKFFQKGKIEVRCKLEGTQGAWPAIWLVTKDTKWPEEGGEIDLIERLNYDPFVYHTVHSPFTHKKKAGPKNSTSFPINPDDYNTYAVDFEGDVIRFYVNGLPSFVYSRMPGKESEKQFPFDLPFFLIIDMQLGGEWVGEVKPFDKPVRMYIDWVRFYQR
>NC_013162.1|WP_015781845.1|701709_702222_-|adenylate-kinase
MIVLITGASHTGKTFLAQKLLEKYKYPYLSIDHLKMGLIRSGYTKLTLENDKALTDYMWPIIREMIKTAIENKQNLIIEGVYIPFDWEKDFTKKYLEDIKCYCLVMSENYIKTHFDDIKKYAKVIENRLEDDWCTMESVLDDNAQFLALAKKHNTNFILIDDRYKVNIEL
>NC_013162.1|WP_009420809.1|700442_701654_+|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MLEPEELKDSKPDLLFILIMGLLSMLTPLAIDMYLPAFVKIANDLNVSEEMISQTLALFTLGFAFGQLFWGPLSDSYGRKPIILIGIITSALVSLVITQIHHIHHFYILRFVQGFFGASPAVVTGALLRDLFAKNEFARQMSMIMIVTMIAPLIAPVLGGHLTDWFHWHIIFYVLMVLGLLAALLVSYKIPETLPKFKRVPLKIGNTLRIYGKLLSNKKVLGYIFCNSLSYSGMFCFITTGSIVYTKLFGVAPQHFGYFFLLNVIVMMTATSLNGKFVTKIGVEKSLRLGLTIQLIAGAWLVICGIFHLGLWATVAGVSMFVGLVSVVSSSANAAILDMYPEVAGTANSLTGMLRFGIGSVVGAVLSLFAITSERPMVFAMAICIGVGALSYLLLVARRTISK
>NC_013162.1|WP_015781844.1|697959_700443_+|zinc-dependent-metalloprotease
MKKHLLILFLSFTTMIFAQKIPAVKDTITKDTTKTKTTEKPEKTPEQKRAEEYAKLIKKKGIERNGLFTIRKIEDKWYFEVPDSLLNRYLLCVTRLKAAPHNFGLYAGEKVNEQTVYFEQKGDKTLLLRSFLNLQEAGTDDNISVAVANSSANPVVASFTVIGRNPKTKAQLIDITDFFKQDNSVTSFSSNAKTQMKIGAIATDRSFVDDIRPYPINVEVNTLKTFNASPSTIPSANKVGAITLELNISMVLLPKTPMQKRLFDPRVGFFATRYIKFSDQQQRTETEYYIHRFRLEPRKEDVKKYLSGQLVRPKKQIVFYIDPATPKQWQKYLILGVNDWNVAFEQAGFKEAIVAKPWPNDPSMSLEDARFNVIRYLPSEKSNAYGPNIADPRSGEIIECHVGWYHNVMKLLNQWYMIQAGAVDKRARTMEFNEELMGDLVRFVSSHEIGHCLGLRHNMGASSQTPVEKLRDKKWVEANGHTASIMDYARFNYVAQPEDNISSKGLYPRIGIYDKWAIEWGYRYYGNKYKDKYAEQEALAEMVTQKLKANPRLWFGGEGKDEDPRAQTEDLSDNVMKANTYGLKNLRYIVQHLPEWTKQPNDKYEHLDEMQTAAYMQYFRYLKHVLKHIGNRYVGIIGEKEVYKEVPKEKVKEAINYLDKELFEAPLWLYPQEIVEKTGATPDKNIISMQNLTLSVLLGEQTLYNLYNQSLTSKNPYPLNEYLQDVFKAVWKPLNHPDARQNTYRRGIERLYLSQIDRLINAPAEAKNSKAASIQQVSDVRLFALQHLDMIEAFAKQALAKEPASSINHLHYQEIIKEIERIKDPKK
>NC_013162.1|WP_015781852.1|709755_714036_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKNILGLDLGTTSIGFAHIVEDENKEKSEIKELGVRIVSLTTDEQSDFEKGKSITTNANRTLKHGARLNLDRYQQRRKYLIDLLQKANLITPSSILAENGKNTTHSTWQLRAKAVTERIEKEEFARILLAINKKRGYKSSRKAKTEDEGQAIDGMAIAKRLYDENLTPGQLSLQLLQQNKKLLPDFYRSDLQKEFDLVWNFQKQFYPDILTDIFYKELQGKGKDATSKAFSKRYHFDTTENKGSKESVRLQAYQWRAEAISKQLSKEEVAYVLTEINNNLNNASGYLGAISDRSKELYFNRQTVGQYLYAKLQENRHNSLKNKVFYRQDYLDEFERIWETQASFHKELTDELKKQIRDVVIFYQRKPKSQKGLISFCEFESKEIEIEKDGKTITKNIGARVVPKSSPLFQEFKIWQILNNVICKRKGIRKKKISAKTTQLDLLNESSQTIFSLDMECKQLLFDELNLKGDLKSDKVLKLLGYSPQEWEINYNQLEGNRTQKALYEAYLKIVEMEAHDVKDILQIKSAKDDWSLDESPLSASEIREKVKAIFQTLGICTKILYFDPLLPVKEFEEQDSYQLWHLLYSYESDDSTSGNETLYRILEKKYAFKREHARILANVALQDDYGSLSTKAIRKIYPNIKENQYSTACEKAGYKHSKLSLTTEELEARELKNIIPLLKKNALRNPVVEKILNQMINVVNALIEKNSERDAEGKITKYFHFDEIRIELARELKKNAQKRYEMTQNINKAKLEHQKISEILQKEFGIKNPTKSDIIRYRLYQELEHNGYKELYTNAPIARDMLFSKNIEIEHIVPKARVFDDSFSNKTLTFHRINSDKGEYTAFDYITSLNSEEELNQYLTRVENAYKTKSISPTKYKNLLKKASEIGDDFINRDLRDTQYIAKKAKEILFQVTKNVLSTSGSITDRLREDWGLVDVMKELNMPKYQSLGLTEVEERKDGNKVTVIKNWTKRNDHRHHAMDALTVAFTKPSYIQYLNHLNARKDENNKNYSVILAIEEKETIKVPTNNGKNKRVFIEPIPNFRQVAKKHLEEIFISHKAKNKVVTKNTNKPAGTDKQQITLTPRGQLHKETIYGKYQYYINKEEKIGVKFDERTIAKVSNPVYREALLKRLQANDNDPKKAFAGKNALSKNPIYLDESKTKTLPEKVNLTYLEEDFSIRKDISPDNFKDLKSIEKVIDQGVKRILIKRLQAYDNDPKKAFVDLEKNPIWLNKEKGIAIKRVTISGVNNAQPLHIGKDHLGKTTLNKEGKEIPVDYVSTGNNHHVAIYRDKEGNLQEQIVSFFDAVVRAQQGIPIIDKTYKQAEGWQFLFTMKQNEMFVFPNATTGFNPAEIDLLDPKNKKLISPNLFRVQKIATKDYFFRHHLETNVETDNILKNVTWKREGLSGLKDIVKVRINHLGDIVSIGEY
>NC_013162.1|WP_041546906.1|714228_714681_-|D-tyrosyl-tRNA(Tyr)-deacylase
MRVVIQRVTHASVDIDKQTVASINKGLLVLVGIEDSDTNEDIAWLSAKIVNLRVFDDENGVMNLSVKDAGGEVLIVSQFTLHASTKKNNRPSYIKAARPEVAIPIYEAFIKQVESLLGKRVPTGQFGAMMQVALCNDGPVTILIDTKNKE
>NC_013162.1|WP_015781854.1|715196_716093_-|WYL-domain-containing-protein
MSLSKIFSRHRFIVERLRIKPCTSEELENAWERSIENTEGQPLAKRTLQRDIQIIKEVYHIIIKFNKSLKAYEITEDNDPYTQNLFEAFDVFRALQNYGNLSKVIQFDRRLPAGTEYLSPLLRAIKEHRQLKLHYYKFWDKKQQPQVRTIEPYLLKEAQRRWYVLAWDVEKKALRVFGLDRITHLDDSKDIKYQHAVPEGVECFFDDSFGAWVDSEHTQAEEVVLAFKKLPNDSVFMPNPAEYLKAMPLHSSQEVVRETDNEIVLKLRLKITPDFVREIQSYGDRVKVLSDNVLICKK
>NC_013162.1|WP_049757007.1|716540_716750_+|hypothetical-protein
MGKDLIRICPTNAKKIERSNNNGGTWYPRYTATSFTFQDLLVSGNELLAQTDKGFYYSNNNGTSWYKRG
>NC_013162.1|WP_015781856.1|717179_717938_+|hypothetical-protein
MYTQAFKEAVAYCKANNLFVGYGNPNGKVLVIGKEAAHIPQEETTENLEKKKEELFQSNVSQWEHILSTNEVPNYDGQRPFSHNPLYAYGNQYNSWDKSKKGGTSRTYLNYEKLYEQLFLQGEKLEKINFQKEFFITEFSDYPTKESYKNEDIEALRKQSIEERKPLFAMPFFKEFPIVIVAANDYPRRYHINLEQTFDVVFQKEIKVGRDHYFLHFSKDNKRILIHTRQLSNSFSRELIPAIVKEAKKFLK
>NC_013162.1|WP_015781858.1|723680_725285_-|L-lactate-permease
MALFLSVLPIVLLIYLMVKKNALPSYIALPLIAGLVYVLHLTYFEGSFVAVNANFIKAIISVATPITVIFGAVLFNRMMEMTGAMNVLRCWLGNISPNPVAQLMIIGWAFAFMIEGASGFGTPAAIAAPLLVGLGFKPLQVAILTLIMNSVPVSFGAVGTPTWFGFGTLIGNGAISDTELSDIGRITAIVHLFAAFVIPVMALKVIVSWQQIRRNIVFILISILSCTVPYVVIAWFNYEFPALVGGAIGLFISVGIASKGIGLSKTDNREVHHEKVKSSELIKALFPTASLIIILALTRIKQLPLKALLNDTTERFTIKLGYLGDFEVTKGLIFSLNNIFATGENESYKLLYVPALIPFVVTVLISIPLFSLKWKQTKELFSASFVQIQKPFLALVGALIMVNVMLMGGENSIVQIIGRGLAQATGSHWTIFSSYLGAVGSFFSGSNTVSNLTFGAVQYSVANTTGLSVPLILALQSVGGAMGNMVCINNIIAVCSVLGIDKAEGKIMKITVVPMMVYGVIAALVAYLVIPLIF
>NC_013162.1|WP_015781859.1|725447_727277_-|hypothetical-protein
MKLNLLKPVAIALLTAFAITSCVKDDDYDIPDPNGKKPLPDYSGQVVSFANVLTKVTASVATYTADEAIEGYVISSDEGGNFYKKIYIQNADKNQGLSVAIDKSGLYTEFPVGAKVQLRLKDLTTQLNNSAIEVGHGTYTAKSGRVSVGTMAEAIYKKHLFDTGERKTVAELAKVSNSIQEVSTDAHVDQLITLKGVHFPTDAVGKTLYDKNNALGNATNYKLTDANGKTIIFRTSSYAKFKDEKVPAGEVEVTGVLTKFNKDYQFMISNYADLVVKGGTSTSTQTGTQTSTTVETLEASNATVADYVVGKTVKLHGTTVVKSGRTYIVFKDGTEIQVFSAKGVTISDAAKEKLATEGYEINVTGVFTDYALKNGTVVKEILYSKESDIEFIKAPAAITYVDVDATTATLASDYQVGKHVNLKNATLKVEGGKSYVVFSDGNKIQLYSPNLKSFSKDAQTKLGTDGQKLTSIKGKFEDYSVNGNTVHQLVYAVEGDIVFGDTPVVQLPELNVATATVADFNKYKDKKVKLEGVITIKDSSTFFEFKDKTEVQVYATSTVFKALSKKTKAKLKTAGTKLIVTGTLGEHTNKDNVIIKQIKYEKEADLDFQ
>NC_013162.1|WP_015781860.1|727327_728017_-|hypothetical-protein
MNKKSIFRRGALAFLVVTTVLVSCSKDNNSNPDPNNPKGTPYMIFTTDKKVGSEITLTINAKEADKKDVWVDLNNNGVYDSGTDVRLSATTAKYKLQGNTVRVYGKVTTFYCNDNEVTSLDVTRNTVLERLDMSHNKIKEVNLHNNTELVYLKVSALPLEDLNLTTNKKLKELRFNLTFSGQKLKKVVSTMHENGGGTVYMNPRVKDNPEEQATMQTLRNKKWTIGHCE
>NC_013162.1|WP_015781861.1|728127_730839_-|TonB-dependent-receptor
MLRKLYLYVLLFVSVSAFSQVKVEGTVIDELSSKPLQGVKVRVSTSPREAVTNSKGKYTLQLPEGEHLLLFSLSGYSSAEQLISLGDTHPYTVPTVSLSGDYQQEAEQLAVITESELEDDESGADAMSGLLQSSQDVFMRRAAFDFSSVFFKPRGYDSKDVTVLINGIPMNRLENGRAQWANWGGLNDITRNQEMSNGLVKSDYTFGGLMGSNYINIRPSLNRAGLRVTTSASNRSYTGRLMATYNSGVQRNGLAYMVSASRRFAPQGSWVDGTLYNAYAFAAGIEYQLNNHSSFNLIGMFSPVKRGKTSPLTREVLDLMGYQYNPFWGKQNGDKRNSRNRIVSEPIFVFSYNYLKNDTRLNVDLGYQFGEIGNTRISYSNAQNPEPNYYKLLPSYYLNQNPSDETMAALQKDYFLTHSQLDWEELYRANYNTTDKRSAFIVSNDINRERTFSANVNFSTPIHENIKWTSGVVYRNVSSDNFAEVDDLLGGDYFMNYDYFEGKPYNADETDMKKKEGDKWNYFYALKSNVAEVFSQFEFTFKNVELFVAGRYHYTDIQREGKFNYPLYADSYGKGAMQVQNGMSTKAGLTYALTGRHLLQANVGYFNTPQSVRNIYANVRNSNRLLPNIKNELAYTADASYILRMPYLKGRLTGFFTEIENTAETNFFYTETALTDEIDRDFVAQTVEGIKKRHFGLEFGAEAQLIPTLKLTAVASVGQYTYINNPSLYISSGEVNKAIDEVTMKNYHVPSGPQQAYSLGLEYRHPKYWWIGATANFLAQNYVSLSALNRTSQFFIDPTTKAPFTNIDTDLARKLLKQERLDDVFLVNLVGGKSWRLNKTYVSLMVSVNNLFDTQFLSGGFEQSRTANYGKMVQDNAQGVPSFGNRYFVGYGRTYMVNLAVSL
>NC_013162.1|WP_015781862.1|731047_732343_-|tRNA-lysidine(34)-synthetase-TilS
MNVEIKKLKEKKILVAISGGIDSVVLTHLLYTHGIELLLAHCNFQLRGRESDDDEAFVRTFAAELSVPLEVKRFDTHQYASSHQLNTQLAARELRYQWFDELASTHFCDAIATAHHANDNLETFFINLSRGSGLEGLLGIPEEKDTIIRPLLQFSRQQIYEYAQAKRLKWREDSSNETNKYVRNVIRHDIIPKLALVHPNYLENFNQTQEYLHQSARFIDFYIGKLKETCFEGHNPIQIDIEKLQAVPELDFVLHKLFYPYGFGNVKDLKNLLLNAEAGKQVLSPTHILIKDNTCLWLKPNEAKRSLSLLISEDMAEVYDPVHLRFEFIEGKVKVKNPIPTEIYVDADKLQYPLMLRYKKEGDVFYPFGMNSEKKLSKFFTDEKYTQIEREEQVLLCSGEDIVWVVGKRLDDRFKITKDTKRAVKISKLEN

Crispr_ID: NC_013162_4

• CRISPR_ID: NC_013162_4
• CRISPR_location: 864536-864611
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013162_4

Consensus_repeat	Method
TTTCAGCTTGCGCTGATGGGTTT	CRISPRCasFinder

spacers of NC_013162_4

>4.1|864559|30|NC_013162|CRISPRCasFinder
GCCCACGAATTGCACGAATTTGCACGAATA

CRISPR arrays and Neighbor proteins around NC_013162_4

CRISPR arrays

The CRISPR arrays of NC_013162_4

>merge|NC_013162|4|864536-864611|CRISPRCasFinder
TTTCAGCTTGCGCTGATGGGTTTGCCCACGAATTGCACGAATTTGCACGAATATTTCAGCTTGCGCTGATGGGGTT

>NC_013162|4|3|864536-864611|CRISPRCasFinder
TTTCAGCTTGCGCTGATGGGTTT	GCCCACGAATTGCACGAATTTGCACGAATA
TTTCAGCTTGCGCTGATGGGGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_015781977.1|866472_867462_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl|CDD|181058
NC_013162.1|WP_041546917.1|875086_875650_+|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl|CDD|187714
NC_013162.1|WP_015781973.1|862939_863161_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015781982.1|872547_873171_-|sugar-transferase	unknown	unknown	gnl|CDD|376775
NC_013162.1|WP_009422444.1|873249_874347_-|O-methyltransferase	unknown	unknown	gnl|CDD|131763
NC_013162.1|WP_015781969.1|859397_860759_-|oligosaccharide-flippase-family-protein	unknown	unknown	gnl|CDD|225153
NC_013162.1|WP_015781966.1|857193_858294_-|glycoside-hydrolase-family-99-like-domain-containing-protein	unknown	unknown	gnl|CDD|379549
NC_013162.1|WP_015781979.1|868807_870733_-|polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|224011
NC_013162.1|WP_015781968.1|858463_859411_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|366154
NC_013162.1|WP_015781981.1|871932_872526_-|acetyltransferase	unknown	unknown	gnl|CDD|274656
NC_013162.1|WP_015781983.1|874638_875019_+|ribonuclease-P-protein-component	unknown	unknown	gnl|CDD|234989
NC_013162.1|WP_015781978.1|867494_868811_-|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|223936
NC_013162.1|WP_015781974.1|863197_864511_-|lipopolysaccharide-biosynthesis-protein-RfbH	unknown	unknown	gnl|CDD|237960
NC_013162.1|WP_015781972.1|862664_862958_-|type-II-toxin-antitoxin-system-YoeB-family-toxin	unknown	unknown	gnl|CDD|131171
NC_013162.1|WP_015781980.1|870800_871928_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|275034
NC_013162.1|WP_015781964.1|855007_856021_-|hypothetical-protein	unknown	unknown	gnl|CDD|340825
NC_013162.1|WP_015781971.1|861775_862654_-|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223528
NC_013162.1|WP_015781970.1|860759_861779_-|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl|CDD|187568
NC_013162.1|WP_015781976.1|865670_866444_-|glucose-1-phosphate-cytidylyltransferase	unknown	unknown	gnl|CDD|131672
NC_013162.1|WP_179943737.1|856028_857141_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl|CDD|223458

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_015781977.1|866472_867462_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl|CDD|181058	PRK07609, PRK07609, CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated.	7.3156e-104
NC_013162.1|WP_041546917.1|875086_875650_+|phosphoribosylglycinamide-formyltransferase	gnl|CDD|187714	cd08645, FMT_core_GART, Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART). Phosphoribosylglycinamide formyltransferase, also known as GAR transformylase or GART, is an essential enzyme that catalyzes the third step in de novo purine biosynthesis. This enzyme uses formyl tetrahydrofolate as a formyl group donor to produce 5'-phosphoribosyl-N-formylglycinamide. In prokaryotes, GART is a single domain protein but in most eukaryotes it is the C-terminal portion of a large multifunctional protein which also contains GAR synthetase and aminoimidazole ribonucleotide synthetase activities.	1.01898e-82
NC_013162.1|WP_015781982.1|872547_873171_-|sugar-transferase	gnl|CDD|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	3.62152e-86
NC_013162.1|WP_009422444.1|873249_874347_-|O-methyltransferase	gnl|CDD|131763	TIGR02716, C-20_methyltransferase, C-20 methyltransferase BchU. Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	1.65945e-10
NC_013162.1|WP_015781969.1|859397_860759_-|oligosaccharide-flippase-family-protein	gnl|CDD|225153	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only].	1.64915e-06
NC_013162.1|WP_015781966.1|857193_858294_-|glycoside-hydrolase-family-99-like-domain-containing-protein	gnl|CDD|379549	pfam14307, Glyco_tran_WbsX, Glycosyltransferase WbsX. Members of this family are found in within O-antigen biosynthesis clusters in Gram negative bacteria, where they are predicted to function as glycosyltransferases.	0
NC_013162.1|WP_015781979.1|868807_870733_-|polysaccharide-biosynthesis-protein	gnl|CDD|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NC_013162.1|WP_015781968.1|858463_859411_-|glycosyltransferase-family-2-protein	gnl|CDD|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	6.74922e-22
NC_013162.1|WP_015781981.1|871932_872526_-|acetyltransferase	gnl|CDD|274656	TIGR03570, NeuD_NnaD, sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. This family of proteins includes the characterized NeuD sialic acid O-acetyltransferase enzymes from E. coli and Streptococcus agalactiae (group B strep). These two are quite closely related to one another, so extension of this annotation to other members of the family in unsupported without additional independent evidence. The neuD gene is often observed in close proximity to the neuABC genes for the biosynthesis of CMP-N-acetylneuraminic acid (CMP-sialic acid), and NeuD sequences from these organisms were used to construct the seed for this model. Nevertheless, there are numerous instances of sequences identified by this model which are observed in a different genomic context (although almost universally in exopolysaccharide biosynthesis-related loci), as well as in genomes for which the biosynthesis of sialic acid (SA) is undemonstrated. Even in the cases where the association with SA biosynthesis is strong, it is unclear in the literature whether the biological substrate is SA iteself, CMP-SA, or a polymer containing SA. Similarly, it is unclear to what extent the enzyme has a preference for acetylation at the 7, 8 or 9 positions. In the absence of evidence of association with SA, members of this family may be involved with the acetylation of differring sugar substrates, or possibly the delivery of alternative acyl groups. The closest related sequences to this family (and those used to root the phylogenetic tree constructed to create this model) are believed to be succinyltransferases involved in lysine biosynthesis. These proteins contain repeats of the bacterial transferase hexapeptide (pfam00132), although often these do not register above the trusted cutoff.	6.83131e-59
NC_013162.1|WP_015781983.1|874638_875019_+|ribonuclease-P-protein-component	gnl|CDD|234989	PRK01903, rnpA, ribonuclease P protein component.	3.17706e-24
NC_013162.1|WP_015781978.1|867494_868811_-|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl|CDD|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	0
NC_013162.1|WP_015781974.1|863197_864511_-|lipopolysaccharide-biosynthesis-protein-RfbH	gnl|CDD|237960	PRK15407, PRK15407, lipopolysaccharide biosynthesis protein RfbH; Provisional.	0
NC_013162.1|WP_015781972.1|862664_862958_-|type-II-toxin-antitoxin-system-YoeB-family-toxin	gnl|CDD|131171	TIGR02116, Hypothetical_protein_Rv3358/MT3466/Mb3393., toxin-antitoxin system, toxin component, Txe/YoeB family. The Axe-Txe pair in Enterococcus faecium and the homologous YefM-YoeB pair in Escherichia coli have been shown to act as an antitoxin-toxin pair. This model describes the toxin component. Nearly every example found is next to an identifiable antitoxin, as indicated by match to models TIGR01552 and/or pfam02604. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	9.84313e-12
NC_013162.1|WP_015781980.1|870800_871928_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|275034	TIGR04181, DegT/DnrJ/EryC1/StrS_aminotransferase, aminotransferase, LLPSF_NHT_00031 family. This clade of aminotransferases is a member of the pfam01041 (DegT/DnrJ/EryC1/StrS) superfamily. The family is named after the instance in Leptospira interrogans serovar Lai, str. 56601, where it is the 31st gene in the 91-gene lipopolysaccharide biosynthesis locus. Members of this family are generally found within a subcluster of seven or more genes including an epimerase/dehydratase, four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD) and a nucleotidyl transferase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analogous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar.	3.99428e-148
NC_013162.1|WP_015781964.1|855007_856021_-|hypothetical-protein	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	2.93274e-06
NC_013162.1|WP_015781971.1|861775_862654_-|NAD(P)-dependent-oxidoreductase	gnl|CDD|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	2.69573e-39
NC_013162.1|WP_015781970.1|860759_861779_-|GDP-mannose-4,6-dehydratase	gnl|CDD|187568	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs. CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	6.11644e-157
NC_013162.1|WP_015781976.1|865670_866444_-|glucose-1-phosphate-cytidylyltransferase	gnl|CDD|131672	TIGR02623, Glucose-1-phosphate_cytidylyltransferase, glucose-1-phosphate cytidylyltransferase. Members of this family are the enzyme glucose-1-phosphate cytidylyltransferase, also called CDP-glucose pyrophosphorylase, the product of the rfbF gene. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	7.76383e-172
NC_013162.1|WP_179943737.1|856028_857141_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl|CDD|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	0

Protein sequences

>NC_013162.1|WP_015781974.1|863197_864511_-|lipopolysaccharide-biosynthesis-protein-RfbH
MSLETIREEIAKLVTQYAEEAYKPKPFEAGKTVIPPSGKVIGEQELQNMVAASLDAWLTTGRFNTAFEKKLADFLGVKYCITVNSGSSANLVAFSALTSPKLGERAIKKGDEVIGVAAGFPTTVNPIVQFGAVPVFVDVDLHTHNVNADLIEQAITPKTKAIMLAHTLGNPFNLEKIKALCEKYNLWLIEDCCDALGATYNGQKVGTFGDIATLSFYPAHHITMGEGGAVFTNNAELKTIAESFRDWGRDCYCAPGCDNTCNCRFSQQHGDLPFGYDHKYVYSHLGYNLKISDMQAACGLAQLDRVEEFIEKRRKNFAYLKNRLQTLTDFLYLPEATPNSDPSWFGFPITLKEESGTARVDLLRFLDQHKIGTRLLFAGNLTKQPYFKGVEYRVVGDLTNTDITMNQTFWVGIYPALGEEHLEYIVEKLEEYFGVNF
>NC_013162.1|WP_015781973.1|862939_863161_-|hypothetical-protein
MVTIQLTFNNEAEHTLFETLFEKFKIKTKVINTESQVNTYSETTAKKIRKARDQKQKGTLTTITPDTLWTLTN
>NC_013162.1|WP_015781972.1|862664_862958_-|type-II-toxin-antitoxin-system-YoeB-family-toxin
MDTNKLAFTVQISEEALQELKIIKKSGTPAVRKKIERIVQELQETPEKGVGAPEQLKGKEGIVYSRALNKKDRLIYEIFKEENLVVIVQFLGHYQDK
>NC_013162.1|WP_015781971.1|861775_862654_-|NAD(P)-dependent-oxidoreductase
MTILLTGATGFLGSHLLKALVNKGYEVVVLKRSTSNMWRLKGFENTFKSYDIDQVPLRKAFEEQYIDTIIHTACVYGRKGESMQQILETNLMFGIELLNTGTFFNTGTFFNTGTLLYKYLNYYALSKKQFEEWLQLASDKIQVVNLKLEHMFGEQDGNDKFTSWILNELQQEKNIIPLTAGTQKRDFIYIDDVVSAYLTCLEQAPQLKSFNDIEVGTGVLTPVKTFVMLVKEVLEKLKGKPIQTQLNFGALPYREGEIMEPQVDNSRLCSLGWQPKRGLEENIERFVKHEIQ
>NC_013162.1|WP_015781970.1|860759_861779_-|GDP-mannose-4,6-dehydratase
MKYLITGGCGFVGSNLAQEVLKRGEELVVLDNLFRYGSAQNLDWLRTQGSFTYYPYDIRNTNDVETVIKKEQPDIVFHLAGQVAMTTSIENPRLDFEVNAMGTFNLLDAIRKYCPNASILYSSTNKVYGDFANLTFKEEKMRYTCQEYPNGFPETYPLDFHSPYGCSKGTADQYLLDFHRIYGLKTLVFRHSSMYGSHQHATFDQGWIGWFVQKAIEIKQNTNQGLFTISGNGKQVRDVLYAEDVVNLYFQGVKYLEQAKGQTFNIGGGIENSLSLLELFAMLEKLLGIKMQYKELPFRESDQLVFVADNTKAQKILQWQPKMTSEQGIEKMVEWVKKK
>NC_013162.1|WP_015781969.1|859397_860759_-|oligosaccharide-flippase-family-protein
MNIKRIREVVFDKLGIDGAILYTTSARIIQAGGGIVTAFLIAKFLSKEEQGFYFTFASVLAIQIFFELGLGGILTQFVAHEMAHIRIKNNTFEGDKKHISRLASILHFSLKWYTVFAFLLLLTLTFGGGYFFYRNTVGIEHIQWKAPWLIVAFFAGSNLLLSPIMAILQGMHKVKEMARLALIQQITVMSISWLSLLLGAKLYVVAINAMVGFIVLVSLYLGGGYAKILYTLWKQPLFEKISYWQEIFPLQWKIALSWASGYFIFQAFNPIVFAFYGPVVAGQVGITLTILNAILSLVVSWTSTKIPLWSSLIAKREYKELDNSVERTLIKSSLVAMLVILGALVFIAGLQYFDFSLGYRFLPLPLCAVFFLSVPFNNIINTWATALRCFKKEPFLFQAFFIGLCCVFEMFFTAKYFTIVVLIYGYFLIVTCVSLPMSYYIFKTKKRNYYEST
>NC_013162.1|WP_015781968.1|858463_859411_-|glycosyltransferase-family-2-protein
MNQHKKILSICIPTYNRAKILDNALNAIQKELKTIDCSKIELIVSDNCSPDNTEEVVENYIQAGMPIVYSKNHTNLGMDGNFVQCFKKASAQYVWVLGDDDFLKEGALSFLLASLKNTNYGLIHLKIFPKGNEEIQIYQTIEDYLSDISYWITFISSNIVATKFVPLINFEKYMGTWFTLIPLYITAAKESSKNLMINKRIFEDAADGATNGGYNFFEVFVVNYLTIRQEMLAGAKNEMYYYKKEKKRLFNEFLLGNIYRFYFKKDIGRYKVEGGWKILFQYFGGNFYFYKGILKLTIKRLLPPQIIQRIKKMLS
>NC_013162.1|WP_015781966.1|857193_858294_-|glycoside-hydrolase-family-99-like-domain-containing-protein
MENKEKKYRAIAFYLPQYHPIPENDEWWGKGFTEWTNVGRAKKLFRGHYQPRVPADLGYYDLRLPEIREAQAQMAKEAGIEGFCYYHYWFGNGKRLLERPFDEVVKLGKPDFPFMLCWANESWHAKFWDVNGVSSKKTLIEQKYDKSDWELHFQTLLPAFKDHRYIQIEGKPAFMIYKPFDFININEFIAFWQELAKKNGLKGIYFIGQLTNIDKQLEAIKEITIDGFNSLRMWNYSLNRSFIERAYRKIYRKIFSVPDIVDYSKIYKSFITPLEAQENIFPTIIPNWDHTPRSGKGGTVFKNTNGENFKQHVMEVLKIISQKEYDKRIVFIKSWNEWGEGNYLEPDLKNGYLYLDILQELLVSQK
>NC_013162.1|WP_179943737.1|856028_857141_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MTKLLFIFGTRPEAIKMAPLIKAFQKEKTFETKVCVTAQHREMLDQVLDFFEIKTDYDLNVMKPNQNLYTLTATIITELKTVLEDCNPDYIFVHGDTTTTMAASIAGFYAGAKVCHIEAGLRTFNKYAPFPEEINRKVTGAIADFHFAPTQQAKQNLLREAVDEKNILVTGNTVIDALLESSKRVVNLQDEEIDALKKIVDRTKKLILVTGHRRENQGEGFIHICQALKKIALQNPEVQIVYPVHLNPNVKEPVYRILSGIENVKLIAPLAYPAFVWLMNQSYLIITDSGGVQEEAPSLGKPVLVMRDTTERPEAVSAGTVILVGTNEQKIVDECEQLLNNQEKYSKMSALHNPYGDGKACERIVEFFKK
>NC_013162.1|WP_015781964.1|855007_856021_-|hypothetical-protein
MNIFSSQNIKIFLPPERNSLNDATQYYIELIEKAIEKAGGSSMRCNSLSEIKNKDIVLTIELNSFMQCFFKRRGIKIIHWVQGVSPEEVMLTKPNKLFYYLRCIIEWLIMKFTTKIFFVSEAMLQHYEKKYKVKVKHKAMIIPCYNKHLQKDTFFTPNRYTKPYFVYAGSLSAWQCFDEMLTIYKKIEEKLPHSKLTILTAEIEKANTALTEKQIQHFEVKYIPLEELEVELSKYKYGFLIRKTSVINYVATPTKMNSYLSVGLIPIFTDAVGDFNEKINLKEYELKLLGNINIEKAVQKILEFENNTNMNRENYYNIVKSIFDNYYNDEKYIKLMG
>NC_013162.1|WP_015781976.1|865670_866444_-|glucose-1-phosphate-cytidylyltransferase
MKAVILAGGLGTRLSEETVVKPKPMVEIGGMPILWHILKIYSHYGINEFIICCGYKGYIIKEYFANYFMHQSDITFDMANNEMHVHQKRAEPWKVTLVDTGEHSMTGGRLRRVLPYIANEEAFCFTYGDGVADIDIAKLLAFHKAHGKQATLTSVYPPGRFGALDIVDNQIMKFQEKPKGDGALVNGGFFVLSPKVIERIKDDNTIWEQEPLKGLAADGQLMSYKHEGFWQPMDTLRDKMLLEELWQNNKAPWKVWQ
>NC_013162.1|WP_015781977.1|866472_867462_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MSKYTIHLKNDKSYPCDENTSLLRAALNNDISLEYSCFEARCRSCRVKILQGKVENLQDEKVLTAEEKAAGYVLSCNVVPRSEVILDVEDLAVKLPKPQVTPCKINNITVLTPNIVEVVLRLPPKIVFQFLAGQYVDIIRNGQKRSYSISHSQCEANELRLFIRNYEGGLFSQYWFNEAKPNDLLRMEGPLGTFFYRNNPDCEEIVLIATGTGIAPIKAILEQLQSTPELTTHKKIWLLWGGRKKEDLFWQPETTLPNFTYIPVLSREEQWQGAKGYVQEIALQQPILWQKAQVYACGSELMIQSAQKLLTQQGLKEENFFSDAFISAN
>NC_013162.1|WP_015781978.1|867494_868811_-|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MRIAVIGTGYVGLVSGTCFAEMGNKVTCVDVNSEKIEKLKQGVIPIYEPGLEEMVQSNLAKTLFFTTDLAEAIKGAEIAFIAVGTPMGDDGSADLQYVLSVAQQIGETMQGELIVVDKSTVPVGTADKVRTTVQAALDKRGMNYKFHVVSNPEFLKEGKAIQDFMKPDRVVIGADSDDAFTKMKALYSSFFLQNERFITMDIRSAEMTKYAANTMLATKISFMNEIANICERVGADVNKVRIGIGSDSRIGYSFIYPGCGYGGSCFPKDVLALKKLAEEVDYKAELIESVDNVNNRQKIVIAQKVVDKYGEDLSGRTFAVWGLSFKPETDDMREAPAIYIIKELIKRGAKVQAYDPKAVHEAKVCYLKDVPVTYVESKYEALKGADALLLLTEWKEFRVPDFDEIAKMLKEKVIFDGRNQYNAFELPSKGWEYVQIGV
>NC_013162.1|WP_015781979.1|868807_870733_-|polysaccharide-biosynthesis-protein
MPQAHTYSDSTLVNLATARYTPRWIVVCMEVFLLFIALFFSFFVVERLGVYIPDSIPLYKRYLLVIGVNIFFMFIFRTYSGIIRYSTFRDLFRILLSSGCTVIAMFIANKISLHVIGEKVLLNPILLIYFTVSFIILFVFRLSVKEFFYLVKEINRRTSKRRILILGIDDEAVAFANGIIGNAAIPYSVVGFLTGRTNPKQATLLGRPIISKDKFIDTPCEELEADGVLINKNHLSKEEMTFWVNVCLDKGLQILKTPALQKLRPEKEGFNLHKIQIEDLLGRRQIVLDNEEVREKHYHKNILVTGGAGSIGSELIRQIATFTPALVVVLDQAETPLYDIELELKECFPDIAFEFVLADITNCERLESVFKAHKFSVVYHAAAYKHVPMIEENPHEAVLVNIQGTKNVALLANKYEVPHFVMISTDKAVNPTNVMGASKRVAELFVQALQNKEGNKTAFITTRFGNVLGSNGSVIPHFRKQIEKGGPVTITHPDIVRYFMTIPEACELVLQAGTMGKGGEIFVFDMGEPVKILNLATRMIKLSGYEPNVDIKLVYTGLRPGEKLYEELLSDSTKTMPTHHKKIMISKDPSMSFTEIEALTTQIYKVATQGDKREVVRLLKQIVKEFKSNNSEYETLDKKIE
>NC_013162.1|WP_015781980.1|870800_871928_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKEKIWLSSPHMGGNELKYIHQAFEENWVAPLGPNVNGFEEDLQRFLGNGVKVSALSAGTAALHLALIECDVQAGDEVLCQSMTFSASANPIVYQGATPVFVDSEESTWNISPVFLEEAIKDRIKKGKKPKAVIAVSLYGMPFKIEEVLTLCKKYDIPLVEDAAEALGSTYKGKPCGTFGRFGVLSFNGNKIITTSGGGALVCHTQEEKDKAVFLSTQARDNAPHYQHSHIGYNYRMSNITAGIGRGQMEVLPQRIEARRKMHAFYADLFEGIEGIKLLTEPNEDYFCNYWLSAITIDKTKTGFDREDLRLAFLEENIETRPLWKPMHLQPVFASAPYYGKKTCEHLFNNGLCLPSGSNLTDADRERIKGVFKKL
>NC_013162.1|WP_015781981.1|871932_872526_-|acetyltransferase
MKGENNKPDIILIGGGGHCLSVIDVVEQEDKYNIKGILDDTKEGDVLGYPILGNRDLVKELSTEGVFFLITVGQIKSSFVREDIALLLESCKARLATVVSPFAYVSKYATIGEGTVIMHNAIINAKAKVGKHCIINTKANIEHNVQIGDFCHISTCATVNGDTVVGKGTFIGSNATISNGITIAEQSIINAGDFIKK
>NC_013162.1|WP_015781982.1|872547_873171_-|sugar-transferase
MYRNIIKPALDFLTALIAFIVLSPIFVVVMVGLWFANNGKPFFYQLRPGKGERIFRIIKFKTMNDRCDANGQLLPDAKRLTKIGAFVRKTSLDEIPQLLNVLKGDMSVIGPRPLLPQYLPLYNETQKRRHEVKPGITGWAQVNGRNAISWEKKFELDVWYVDHQSFVLDLKILFLTVKKVFIREGISQEGQATMEEFRGGRNTTSSL
>NC_013162.1|WP_009422444.1|873249_874347_-|O-methyltransferase
MNLTPAIRKQYTTEQKTALEAQRLAQEIAFAPVVFQISHLMVKLGVFEALCNAPEGLTMQEVATKTQLSDYAVKILLESSLSIGTVLLKEGDRFAISKAGWFLLRDKSTRVNMEFIQEVCYEGLFHLEEALKEGKPAGLKVFGSWPTIYEGLSQLPQKAQEKWFAFDHYYSDYSFEDALNIIFKRPVKTLLDVGGNTGRFALKTVSFNPDVQVTIMDLPQQLGLMKNNIAGKEGADRIGGYPANLLDASVPFPKGFDVIWMSQFLDCFSEEEVTSILSRAAAAMDAHTELYILEAYWDRQQHETGAYCLTQISVYFTAMANGNSKMYYSGDMIKCVERAGLKVVDIYDNLGSGNSHTLFKVVING
>NC_013162.1|WP_015781983.1|874638_875019_+|ribonuclease-P-protein-component
MCFILPTFPKTEKLCKREAIQQLFAQAEALTCYPLRLLYAPVSSLEASYQLLISVPKRTFKRAVHRNLLKRRLRESYRLQKHLLPVKTEKYALAFLYIGKELADYATIYKSVTQLIEDFSHQLTQE
>NC_013162.1|WP_041546917.1|875086_875650_+|phosphoribosylglycinamide-formyltransferase
MKKIIIFASGSGSNAERIATYFHQKGTAQVSLILCNNPQAGVLTRAKRLAIPSLVFNRQAFYESDIVLNVLKSQHPDLIVLAGFLWKVPAYLTEAYPHKIINIHPSLLPKYGGKGMYGSHVHEAIIANAEKESGITIHYVNEHYDEGNIIFQAKTTVLPTDTPDTLAEKIHLLEYEYFPKVIEEILV

Crispr_ID: NC_013162_5

• CRISPR_ID: NC_013162_5
• CRISPR_location: 941174-941251
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013162_5

Consensus_repeat	Method
CCTTCAAAGGGGGAATGTAGTGAC	CRISPRCasFinder

spacers of NC_013162_5

>5.1|941198|30|NC_013162|CRISPRCasFinder
AGGGAAGCGAAAGAAACATCCCCCTAGCCC

CRISPR arrays and Neighbor proteins around NC_013162_5

CRISPR arrays

The CRISPR arrays of NC_013162_5

>merge|NC_013162|5|941174-941251|CRISPRCasFinder
CCTTCAAAGGGGGAATGTAGTGACAGGGAAGCGAAAGAAACATCCCCCTAGCCCCCTTCAAAGGGGGAATGTAGTGAC

>NC_013162|5|4|941174-941251|CRISPRCasFinder
CCTTCAAAGGGGGAATGTAGTGAC	AGGGAAGCGAAAGAAACATCCCCCTAGCCC
CCTTCAAAGGGGGAATGTAGTGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_081433011.1|937790_938945_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|226957
NC_013162.1|WP_015782033.1|947050_948586_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl|CDD|185760
NC_013162.1|WP_015782035.1|953307_954048_-|tRNA-threonylcarbamoyladenosine-dehydratase	unknown	unknown	gnl|CDD|238384
NC_013162.1|WP_002674172.1|940142_940535_-|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl|CDD|376719
NC_013162.1|WP_041546671.1|943981_947038_+|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl|CDD|274948
NC_013162.1|WP_009418516.1|950117_950648_-|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl|CDD|223740
NC_013162.1|WP_009410520.1|952456_952747_-|cell-division-protein-ZapA	unknown	unknown	gnl|CDD|377476
NC_013162.1|WP_015782028.1|939062_939773_-|Fic-family-protein	unknown	unknown	gnl|CDD|225718
NC_013162.1|WP_015782025.1|935667_936948_-|membrane-protein	unknown	unknown	gnl|CDD|224978
NC_013162.1|WP_015782026.1|936954_937719_-|type-III-pantothenate-kinase	unknown	unknown	gnl|CDD|237348
NC_013162.1|WP_009422343.1|950654_952223_-|ribonuclease-Y	unknown	unknown	gnl|CDD|237177
NC_013162.1|WP_015782034.1|948707_950078_-|DASS-family-sodium-coupled-anion-symporter	unknown	unknown	gnl|CDD|273267
NC_013162.1|WP_015782021.1|933316_933535_-|YgjV-family-protein	unknown	unknown	unknown
NC_013162.1|WP_015782031.1|941830_943786_-|hypothetical-protein	unknown	unknown	gnl|CDD|276809
NC_013162.1|WP_015782022.1|933534_933717_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_002674144.1|952749_953043_-|hypothetical-protein	unknown	unknown	gnl|CDD|275056
NC_013162.1|WP_015782024.1|934309_935653_-|hypothetical-protein	unknown	unknown	gnl|CDD|176974
NC_013162.1|WP_015782023.1|933731_934304_-|LPS-export-ABC-transporter-periplasmic-protein-LptC	unknown	unknown	gnl|CDD|275202
NC_013162.1|WP_015782029.1|939774_940101_-|virulence-protein	unknown	unknown	gnl|CDD|226452
NC_013162.1|WP_015782030.1|941334_941694_-|DUF488-family-protein	unknown	unknown	gnl|CDD|225730

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_081433011.1|937790_938945_-|ABC-transporter-permease	gnl|CDD|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	1.44889e-40
NC_013162.1|WP_015782033.1|947050_948586_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl|CDD|185760	cd08977, SusD, starch binding outer membrane protein SusD. SusD-like proteins from Bacteroidetes, members of the human distal gut microbiota, are part of the starch utilization system (Sus). Sus is one of the large clusters of glycosyl hydrolases, called polysaccharide utilization loci (PULs), which play an important role in polysaccharide recognition and uptake, and it is needed for growth on amylose, amylopectin, pullulan, and maltooligosaccharides. SusD, together with SusC, a predicted beta-barrel porin, forms the minimum outer-membrane starch-binding complex. The adult human distal gut microbiota is essential for digestion of a large variety of dietary polysaccharides, for which humans lack the necessary glycosyl hydrolases.	1.23046e-24
NC_013162.1|WP_015782035.1|953307_954048_-|tRNA-threonylcarbamoyladenosine-dehydratase	gnl|CDD|238384	cd00755, YgdL_like, Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.	7.18726e-93
NC_013162.1|WP_002674172.1|940142_940535_-|30S-ribosome-binding-factor-RbfA	gnl|CDD|376719	pfam02033, RBFA, Ribosome-binding factor A.	4.67807e-28
NC_013162.1|WP_041546671.1|943981_947038_+|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl|CDD|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NC_013162.1|WP_009418516.1|950117_950648_-|mechanosensitive-ion-channel-family-protein	gnl|CDD|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	5.44229e-09
NC_013162.1|WP_009410520.1|952456_952747_-|cell-division-protein-ZapA	gnl|CDD|377476	pfam05164, ZapA, Cell division protein ZapA. ZapA is a cell division protein which interacts with FtsZ. FtsZ is part of a mid-cell cytokinetic structure termed the Z-ring that recruits a hierarchy of fission related proteins early in the bacterial cell cycle. The interaction of FtsZ with ZapA drives its polymerization and promotes FtsZ filament bundling thereby contributing to the spatio-temporal tuning of the Z-ring.	4.32502e-13
NC_013162.1|WP_015782028.1|939062_939773_-|Fic-family-protein	gnl|CDD|225718	COG3177, COG3177, Fic family protein [Function unknown].	5.0973e-19
NC_013162.1|WP_015782025.1|935667_936948_-|membrane-protein	gnl|CDD|224978	COG2067, FadL, Long-chain fatty acid transport protein [Lipid metabolism].	0.00808019
NC_013162.1|WP_015782026.1|936954_937719_-|type-III-pantothenate-kinase	gnl|CDD|237348	PRK13320, PRK13320, type III pantothenate kinase.	2.34043e-120
NC_013162.1|WP_009422343.1|950654_952223_-|ribonuclease-Y	gnl|CDD|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0
NC_013162.1|WP_015782034.1|948707_950078_-|DASS-family-sodium-coupled-anion-symporter	gnl|CDD|273267	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter. The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds].	3.59981e-95
NC_013162.1|WP_015782031.1|941830_943786_-|hypothetical-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.03664e-12
NC_013162.1|WP_002674144.1|952749_953043_-|hypothetical-protein	gnl|CDD|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	0.00979185
NC_013162.1|WP_015782024.1|934309_935653_-|hypothetical-protein	gnl|CDD|176974	CHL00033, ycf3, photosystem I assembly protein Ycf3.	2.77227e-05
NC_013162.1|WP_015782023.1|933731_934304_-|LPS-export-ABC-transporter-periplasmic-protein-LptC	gnl|CDD|275202	TIGR04409, LptC_YrbK, LPS export ABC transporter periplasmic protein LptC. Members of this family are LptC, a periplasmic protein tethered to the inner membrane in the lipopolysaccharide (LPS)exporter transenvelope complex (Lpt), which is responsible for conducting LPS to the outer leaflet of the outer membrane in most Gram-negative bacteria. LptC is homologous to LptA, another member of the transenvelope complex. Genes lptC and lptA are often adjacent. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	6.99958e-12
NC_013162.1|WP_015782029.1|939774_940101_-|virulence-protein	gnl|CDD|226452	COG3943, COG3943, Virulence protein [General function prediction only].	8.11679e-18
NC_013162.1|WP_015782030.1|941334_941694_-|DUF488-family-protein	gnl|CDD|225730	COG3189, COG3189, Uncharacterized conserved protein [Function unknown].	3.66766e-33

Protein sequences

>NC_013162.1|WP_002674172.1|940142_940535_-|30S-ribosome-binding-factor-RbfA
MENNRQKKIAGIIQEELAKVLQQSIRDAGQQNLLISVTKVNVTVDLSVAKVYLSVFPEAKAAEVLKGVTSNAPLIKHELSQITKHQFRRMPELYFYIDDSLQYIEGIEQSLKEEENPIENRDLLYKRKMT
>NC_013162.1|WP_015782029.1|939774_940101_-|virulence-protein
MENQKGEILFYQREDGSAQIDVRLEEDTVWLTQQLMAELFNTSKQNISLHIQNIFEEGELIPDSTVKKFLTVQKEGPRDVRRPSKAMEEVILESLKVLEKNTAKLLKK
>NC_013162.1|WP_015782028.1|939062_939773_-|Fic-family-protein
MLLKQLLQEKETKLKGGIYHRTQIDFCYNSNHIEGSQLTHEQTRYIFETNTIGITEQAVKIDDILEAINHFKAFDAMLECATEPLTQEMIKTFHSILKADTSDSNKDWFAIGDYKKLPNEVGGNATSLPENVEQEMTALLVDYHQKQTKTFRDLVDFHWRFETIHPFQDGNGRIGRLLLFKECLANNIVPFIITEQLRWFYYRGLQNWQQTEGFLLDTCLTAQDEYKAVMAYFRIC
>NC_013162.1|WP_081433011.1|937790_938945_-|ABC-transporter-permease
MFAKSSQNVINIINRVTAFVVVLGGAALFIVLAGFAGLKNFTLSFSSTFDPDLKVFPKTGKYLSLTNQDTLKLSQLSSVVHFTKVLEEQVFLTHNQKNHIAYIKGVDAEYPKVNDVDSILVLGNWELSPPSVIVGATIFNNLGLNLLDGSSPLQIVVPKAGKGSILNDPMPYRQAFSVVQGIYQLTEELDKKYVFSSLDEAQFLLGLSKGQVSAIEVKLAPNADEKQVVEQLSQLFQEPVVVKNRAQLNDALYRMLNTENIAVYLIFILVLIIALFNLVGAIIMMILDKKDDLQTLYALGMNEKQMRQIFFWQGTMASVIGALIGIALGVAVVLLQQHFQFVMISPTLAYPVAITPLNVLIVLATIVVLGVLASLVASSRVRVK
>NC_013162.1|WP_015782026.1|936954_937719_-|type-III-pantothenate-kinase
MNLIIDEGNTSIKVALFKKGIQTFFLSFAKDGFQESFLSKVPLNEVTHCIIASVVTEVKERFSFLEQLLPDVLYLTAETPVPFVNKYATPHSLGIDRLALVAGAVTRFPNRNVLIIDAGTCITFDIVTDRKEYLGGAIAPGIAMRLKAMHHFTSKLPLVSEQFFDTEQFIGNTTESCMLSGVYHNVACEIEGVIKKYEAKFPSLITILTGGNQNYLQERIKNQIFAGSYVLLEGLNAILEYQTKEGEAHVTNIG
>NC_013162.1|WP_015782025.1|935667_936948_-|membrane-protein
MNKKLITLISALFTTVYVSFAQQTTESPYSFYGVGERNFNGIAEESAMGGIGVYADSTRINMQNPASLSHLKFTAFSAGFTMQSKNIVTNETKIGTKSSAFDYFTLGFPILENFGVSFGLVPYSSVGYKLKHTTSETVNQFEGKGNVNQFFLSSGVKIFGGFSLGASFRYNFGTIDMTDLLQQKDVQFYTQEFSKSRLKGGAFNLGLYYEETLKHRLRLYTSLVYTPQSKLSSENQRNISTLGYVTGNNRRSAPQLAIRETRALDLEALGLKNTSLTLPTQIEFGLGLGEHQKWFTGIEYTYANTKAFSNPFLTTTNVSYTDGYKIALGGFWIPNYNSYSSYWKRVTYRIGLRYENTGIVLNNQNINDFGTSFGLSLPVKGFSNLTLVGEYGIRGTTSANLVKENYFNLKIGFTLNDKWFQRTKYQ
>NC_013162.1|WP_015782024.1|934309_935653_-|hypothetical-protein
MRRRILLATVVASFFYVAYAQAQDCKNNEELKQKLSIFSEYAKAKNYKEAYPVWKEVYTQCPSLHYATFAYGERILQDKMNTTTGAEKTQNAKELLQLYTDYNKTFPTRLSATEMRIRQALLMFDEKIGTDKEIYDLLHKAFTEDKANFKNEKALYLYFSELVSLHEKGQKELQEVFDAYDNVSDKIQDEKNELSETINKYLAQEEAGTLSEKDKRLLDGCRKRVDNYETIAESVDAKLGQLADCKNLIPLYTKNFEANKNNEEWLRRAAGKMSDKDCTKDPLFVKIVTSLHNVKPSANSAYYLGVMNDKAGNSAKAIQYYNESVNLETDNFKKSKLLIRIASKHSKAQAVAYAQKALSYNPSNSDAYRIMAHAYASSANECGSTPFEKRAVYWLAAKTARKGGLESLAARYDALAPSKVDVFESGLAGKNITFKCWIGQSITVPRL
>NC_013162.1|WP_015782023.1|933731_934304_-|LPS-export-ABC-transporter-periplasmic-protein-LptC
MKVLILDITKSIAVLMSMAMLFSCNNDMRNLQQLSIQKKFPQGEAFDFKLVYTDSTKVVAVVTSKLNKDFTNQRMPYSEFPEGVKVEFYDQARHKNIVEANYGIIYPSSDMVELRDNVVLTTYDGKKLKTSQLFWDQKEDWIFTDREFSFTDETKGTVTNGIGMDFDKKFSTVKAHKTTGILAIEDNEEE
>NC_013162.1|WP_015782022.1|933534_933717_-|hypothetical-protein
MNARIFFEYAYLAIALYCAYEVYNLWGTVDRTQWYLYIAFALGALAMFWFRRQTRLKRKK
>NC_013162.1|WP_015782021.1|933316_933535_-|YgjV-family-protein
MIDIIGYAASLFVVLSFLIKDNLVYIRLTNLVGCALFVVYGFLINSIPVILPNSFLIIVQIVYIWRELRKKK
>NC_013162.1|WP_015782030.1|941334_941694_-|DUF488-family-protein
MKIQLKRVYEAESPEDGFRILADRLWPRGIKKEALHLDFWAKEVAPSTALRKRYHQDGKFEDFKADYTQELLANPAFASFLEMLKPHKVITLLTASKLIEKSALPILEEAISKNSLKTS
>NC_013162.1|WP_015782031.1|941830_943786_-|hypothetical-protein
MSKKLLIALAVLLCLVGIVFLFFKTTNQEAYTSVEDINKETPQGYIGSASCKQCHLKEYNEWTLSDHYKAMQIANDSTVLGNFNNVTYTADGITSRFFKRDGKFFIHTQSEDGSYKDYEVLYTFGYYPLQQYITDFPNGKKQVFRQSWDSRQNKWFHQYAGEVIPPDDYLHWTQAGQNWNLMCASCHSTNLQKNLNPYTNSYHTTYSELTVSCESCHGGAKTHAESKGKTRTFVLASQTQELNACMPCHTRRGEVTQHHAMVTEVMDEYLPEVPVTDLYFPDGQVLGENYKYSSFLQSKMYHQNVRCTSCHSPHTGKLKAEGSKVCLQCHAPKYASQAHTFHKGNPAETDCRVCHMPTRTYMGNDVRHDHNFYVPRPDLSAQYGTPNACNACHTDKTAGWAAEAVAKWYGKQRKPHFAENLIKGSKGNITALSSLLEDKTTPAIVRAGAIHYLGNHPSEKSFALIKKELHNPDPQTRYRAVVAISEYPLNLYENDLLPLLTDKVKAVRMLAANALLTQKGLEACRVYNGFEQAHQEYKEFVLSQSDFPLGSATAGDYFVKINDTDNAIRFYERALLKDKQLNYIRLNLAVLYSGKAQNDKAESFLNEALKYEPKNAQIYYDLYLLYNELGREAEAKVALSKAKALGFKGRF
>NC_013162.1|WP_041546671.1|943981_947038_+|SusC/RagA-family-TonB-linked-outer-membrane-protein
MTKLRMLYSWALFLLVIFSVTAQNIEVSGTVKDEKGEPLLGVLVLIKGTQRGAATDMDGNYTIQTKVGETLSFSILGMKTVERKITASTKRLDIVLKEDVQELEEMVVTGYGAPKLASRTVAQVAQVQGKDVSAAPVASVSDALQGRLAGVVVTSDSGRPGSNSDILIHGYNNFQGALRGERTQEPLYIMDGIAVSSSVMSRFNPNDIESITVLKDAASTSIYGARAANGVILITTKKGRNNERTSVTISHQLGFTALTNASRKFFDDMMTPREYMDFWIEKNPEAVNLAVGKFSSNKDVARQSADKILADNPYNTRWDKVFFRDFVPLIRTDVSISGGTNNSTYYLSFGHFSQEGSTAPRSDYRRYTVNGSINTQITKWLKTGFSFAAGHTEREGGSTLNTPKVIALPLYSPTYEDGRRKNYIPGITSRSAGFYHPDYYAETHPSNSFSDDFLPSGFVSIEPIKNLIFKTQGGIQYGYGESELKELPSFIDYKFFDDPNPYTSVSNSRTLRKTITNTLEYRFLLGENKKHSFNVLLGQESVENSSKQLDATTFGQPSEGLTMLRHGSKDKRIEDQKTVSTFNSYFGRVEYSYNTRYFLDLSMRRDGSSAFGKNNHYGNFWAIGAMWKLKQENFLKDVKWLSDLNLRFSTGLSGNALGGYKHITTIKPDNFYQGKTAYTVGGLGNPDLRWEEQRKTTVGLNIVIDRGTSFNIEYYDRETYDMISSRELNSTSGQNQFFDNAGGMRNRGIDFTFSSVVYRSENQDLSIRPYFNVNYNKQEITALFGNKTSNVVPSSEIGYKLGRALEWAAVIPKGVNPTTGQMEYYIPGDDRMEQVTDDNRVTTTYDSSKLGQTTGKKMQAPINGGFGWNISYKTFSLDMAFSFSLEKYKWNYDMKYTENPDQFGDHNLSRKILDYWKNPGDNTRHPKINTTTFVNSSDARMIQDASFMRLKNITLSYSLPKEVIKQLNFFEGVRLYATARNIFTLTKYEGADPEYNNAISSGGYPPSRQFTLGVDVNF
>NC_013162.1|WP_015782033.1|947050_948586_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKKIYKIIILVVAPLFFTGCFNLDQQPYEDLSQANSFKTVQDAQFWVNGMYGKLRTNIYGSAMYATDLQADFLNMALRDGTNETITNFQNWTLFTVNNAATATIWQRYFGAIQNINIGLEGIPTITIPQENYRTDSAQIKHNMGELYLARAYYYTYLLTHYCPTDEASAYGLPLLSGPTINNFPNRSTVGQTYDFILADIAQAETRLSDVTGALGSEKFTKDAVAALKARVLLYRGKWAEAYATATSIIGSRYSLVSSSSDLEKVWKDDDTAESIVQLYAKYDVGNTAELPSANDIYLGYQREWNNRLRRYEIRYLPKAIPTQDFVDLYNNSDYRKSIYIKKLFANYGSATFTDLYLVNKYPDNPLLKQTSGISPTYMHRPKVFRIAEIYLIAAEAAYKNGDQTNAKTYLDRLRTARGIGSVTYTDLWAEIQNERNRELAFEGFRMADIKRWNLGVVRGTPQNLSAIVSDPADQYYQLNIPAGNYKMVWPLSPSDILYEQGRANWQQNPGW
>NC_013162.1|WP_015782034.1|948707_950078_-|DASS-family-sodium-coupled-anion-symporter
MLTNYIKRSVIIAIALAVGFLLYGLLPYEEPTNKGLALLAFVAILWLTEAIHITVTALLVPVLAILLGLESTKSALQAFANPTIFLFFGGFAIATALSVQKLDKYIAHKVIAIARGNFLLAVFFLFLATALLSMGISNTATAAMIIPLAIGLLKNIDYESNKGTYAFVILGVAYSASIGGMGTLVGSPPNAIVASQLNITFSEWLRYGMPTVLGLMPLMIGTLYVVFRPKLNIKITSTEGVVDKLNGKQYLTILIFLITALCWIFSDLINETLTSFIGIEKIKDFDAVVAMIAAVFVCFFGVAEWKQIQENTDWGVLMLFGGGLSLSVILTQSGASKALVDSVQFLIADSNYFVIGLMVATFIIFLTEFTSNTASAALLVPIFISVAENLGVNPLGLSLIIGIGASCAFMLPVATPPNAIAYGTGKVSQRDMIKAGFVLNILCIIFISVVAYYFWR
>NC_013162.1|WP_009418516.1|950117_950648_-|mechanosensitive-ion-channel-family-protein
MNYIQDYLYQIIATAITLVVFIALRYLVNSIINKFGKKAEFVESRTHLVKKYIDYFIYALAILTIVSIWGIKTEQLFLFVTSILTVIGVAFFAQWSILSNITAGIIVFFSSPFRIGDTIKILDKDYPIEAKIIDIKSFYTLLKTTEGEQISLPNNLLLQKGIVIVSEKKYAVKIKP
>NC_013162.1|WP_009422343.1|950654_952223_-|ribonuclease-Y
MDSTVIISIAVFIIALFIGFAIAKSLEKKNASKIILNAKNEADVLLKNAKAEAENIKKDKIFQAKEKFLELKAEHEKTITAKDKKMAEAEKRIRDKESQVSNELAQNKRLKDELEKKTEEADFRLQTLDKKQEEIDRLHKSQVQQLEVISGLSAEEAKKLLTDSLRSEAQADAMAYIQNTIEEAKLTAHQEARKIIINTIQRIGTEEAVDNCVSVFNLESDEVKGRIIGREGRNIRALEAATGVEIIVDDTPEAIILSCFDSVRREIARLSLHKLVTDGRIHPARIEEVVEKTTKQIEEEIVEIGKRTVIDLGIHGLHPELVKCVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNPKLAKRAGLLHDIGKVPQIESETPHALLGMEWAEKYGEKPEVCNAIGAHHDEIEMTSLLSPIVQVCDAISGARPGARRQVLDSYIQRLKDLEDAAFTFQGVKKAYAIQAGRELRVIVESERVTDDKAAELSFNLSQKIQTDMTYPGQVKVTVIRETRAVNIAK
>NC_013162.1|WP_009410520.1|952456_952747_-|cell-division-protein-ZapA
MEQDGLRIKLSVADRLYPLTIAPQQEEGFRKAAKKINDMIQDFETVYELRDKQDGLAMCAIALAREIEQAKLNETHEDESLKETLAQVYNALNQIG
>NC_013162.1|WP_002674144.1|952749_953043_-|hypothetical-protein
MSDLKKLVALLEEKAIVLQSKFNSLREENGKLKQTIEELRSEKQSLESTITTLKEKNETLAIANRILGSKDNKRETKLKLNTLIREIDACITQLTKQ
>NC_013162.1|WP_015782035.1|953307_954048_-|tRNA-threonylcarbamoyladenosine-dehydratase
MNNHWLERTELLIKQQGITTLQNAHILIAGLGGVGSYAAEFVTRAGVGALTIVDADTVSLSNINRQLPALHSTIGQAKTEVMRARLLDINPELKLTVIHEFLTPERAWEIVTPDFDYVIDCIDSITPKLNLILAAKRKHVKLVSCMGAGGATDVSQIKVTDLMKTYNCPLAKFIRKRLKNERIHSGIKAVFSSEIVSKDSMQRTEGLDYKKSFYGTISFMPAAFGLYAAATAVNYLLAKQQNKEGL

Crispr_ID: NC_013162_6

• CRISPR_ID: NC_013162_6
• CRISPR_location: 1111811-1111923
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013162_6

Consensus_repeat	Method
CATCACTACTGAGGCTTGTCCCCCTTCGGGGG	CRISPRCasFinder

spacers of NC_013162_6

>6.1|1111843|49|NC_013162|CRISPRCasFinder
TTCGGGAGCCTATCAAAGGTTCTACCATCGCTATTGCATCAGGTTCTAC

CRISPR arrays and Neighbor proteins around NC_013162_6

CRISPR arrays

The CRISPR arrays of NC_013162_6

>merge|NC_013162|6|1111811-1111923|CRISPRCasFinder
CATCACTACTGAGGCTTGTCCCCCTTCGGGGGTTCGGGAGCCTATCAAAGGTTCTACCATCGCTATTGCATCAGGTTCTACCATCACTATTGAGGCTTGTCCCCCTTCGGGGG

>NC_013162|6|5|1111811-1111923|CRISPRCasFinder
CATCACTACTGAGGCTTGTCCCCCTTCGGGGG	TTCGGGAGCCTATCAAAGGTTCTACCATCGCTATTGCATCAGGTTCTAC
CATCACTATTGAGGCTTGTCCCCCTTCGGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_015782183.1|1119982_1122154_+|glutamine-synthetase-III	unknown	unknown	gnl|CDD|226477
NC_013162.1|WP_015782180.1|1117098_1118334_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782178.1|1115202_1115898_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782177.1|1114674_1115187_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782173.1|1107289_1108576_+|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl|CDD|283235
NC_013162.1|WP_015782174.1|1109604_1110255_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782167.1|1098851_1100438_+|glycoside-hydrolase	unknown	unknown	gnl|CDD|293019
NC_013162.1|WP_015782166.1|1096497_1098756_+|hypothetical-protein	unknown	unknown	gnl|CDD|274350
NC_013162.1|WP_015782184.1|1122802_1124089_-|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl|CDD|234607
NC_013162.1|WP_015782182.1|1119093_1119957_+|DNA-damage-inducible-protein-D	unknown	unknown	gnl|CDD|183178
NC_013162.1|WP_015782170.1|1102625_1103453_-|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|372554
NC_013162.1|WP_002674535.1|1106099_1106921_-|mechanosensitive-ion-channel	unknown	unknown	gnl|CDD|182386
NC_013162.1|WP_015782179.1|1115917_1116592_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_174250640.1|1113994_1114654_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782185.1|1124150_1125077_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl|CDD|238921
NC_013162.1|WP_015782168.1|1100564_1101752_-|threonine-ammonia-lyase	unknown	unknown	gnl|CDD|236182
NC_013162.1|WP_015782169.1|1101861_1102515_-|PorT-family-protein	unknown	unknown	gnl|CDD|372635
NC_013162.1|WP_041546701.1|1118621_1119044_+|hypothetical-protein	unknown	unknown	gnl|CDD|376772
NC_013162.1|WP_015782172.1|1105091_1105928_-|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|275383
NC_013162.1|WP_015782171.1|1103461_1104274_-|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|372554

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_015782183.1|1119982_1122154_+|glutamine-synthetase-III	gnl|CDD|226477	COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only].	0
NC_013162.1|WP_015782185.1|1124150_1125077_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl|CDD|238921	cd01946, ribokinase_group_C, Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.	1.66016e-130
NC_013162.1|WP_015782173.1|1107289_1108576_+|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl|CDD|283235	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein. This family consists of several bacterial branched-chain amino acid transport proteins which are responsible for the transport of leucine, isoleucine and valine via proton motive force.	1.03838e-73
NC_013162.1|WP_015782167.1|1098851_1100438_+|glycoside-hydrolase	gnl|CDD|293019	pfam16410, DUF5018, Domain of unknown function (DUF5018). This family of proteins is functionally uncharacterized. This family is found in various Bacteroides and Alistipes species. Proteins in this family are around 600 amino acids in length.	5.4443e-08
NC_013162.1|WP_015782166.1|1096497_1098756_+|hypothetical-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.44877e-05
NC_013162.1|WP_015782182.1|1119093_1119957_+|DNA-damage-inducible-protein-D	gnl|CDD|183178	PRK11525, dinD, DNA-damage-inducible protein D; Provisional.	4.28709e-138
NC_013162.1|WP_015782170.1|1102625_1103453_-|leucine-rich-repeat-domain-containing-protein	gnl|CDD|372554	pfam13306, LRR_5, Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.	5.11918e-18
NC_013162.1|WP_002674535.1|1106099_1106921_-|mechanosensitive-ion-channel	gnl|CDD|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	5.40072e-55
NC_013162.1|WP_015782184.1|1122802_1124089_-|glutamate-1-semialdehyde-2,1-aminomutase	gnl|CDD|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	0
NC_013162.1|WP_015782168.1|1100564_1101752_-|threonine-ammonia-lyase	gnl|CDD|236182	PRK08198, PRK08198, threonine dehydratase; Provisional.	0
NC_013162.1|WP_015782169.1|1101861_1102515_-|PorT-family-protein	gnl|CDD|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	4.06453e-18
NC_013162.1|WP_041546701.1|1118621_1119044_+|hypothetical-protein	gnl|CDD|376772	pfam02369, Big_1, Bacterial Ig-like domain (group 1). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial surface proteins such as intimins and invasins involved in pathogenicity.	0.0080314
NC_013162.1|WP_015782172.1|1105091_1105928_-|leucine-rich-repeat-domain-containing-protein	gnl|CDD|275383	sd00036, LRR_3, leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	1.72121e-23
NC_013162.1|WP_015782171.1|1103461_1104274_-|leucine-rich-repeat-domain-containing-protein	gnl|CDD|372554	pfam13306, LRR_5, Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.	7.3618e-23

Protein sequences

>NC_013162.1|WP_015782174.1|1109604_1110255_+|hypothetical-protein
MKNIKKRYYCAVMMAVFFMLGFTVKSDEERTTVVPPSFVVDIPRLVTAMPKEITSDPNLFSLNPPQVGKSFIGFKEALAYRESRGDYFIVNRFGYMGKYQFGKSALQFYGVKDAQQFLNSPEQQERLFTLSLQRNKWYLRKEIKQYVGTKINGIEVTESGILAAAHLVGAQSVKKYLKKKGRYAFADGNGTTLQNYLKHFAGYDTAHIIPEKRPRF
>NC_013162.1|WP_015782173.1|1107289_1108576_+|branched-chain-amino-acid-transport-system-II-carrier-protein
MDKKKFITILTAGFALFAMFFGAGNLVIPPYIGLKIGALSGVAFAGFFVSDILLSFLAVVMVASVGLTFTDLGKRFPPLFVNALVFLIIVTLGPLICVPRTGSTTYEVAVQPFFPQIGKITFGVLYFGITLLLSISKAKIVDIIGKILTPFLILSLTILIVVGTINAPKELVDNGYSFGEAFAFGFSKGYLTLDVLAGVIFSGLIISSIVQEGYRSEADKKQVTILSGVIAAGCLVFIYGGLLYLGATSNLSSSEGISYIDILKHIAYNVLGDNGGIVISVAVAFACLTSAIAIVSAMGEIFENISKGRIPYKWGVWICTLVSFALSIRSVDEIIHYAGYLLDFSYPITIALTLFVLFFGKRVQSNAPYIVGVTLTAILSGLFIIGDLLHIAWINNFKALLPLADYRIEWFIPAFLSFIITAIIVKRV
>NC_013162.1|WP_002674535.1|1106099_1106921_-|mechanosensitive-ion-channel
MNDFSTADFEGLIKEWITGLIKFAPTLLWAIALYFIGRYIIRFIAKLLKGLMVRRGVDVALQGFLLQVVRWILYIALFLTIVQVIGLPATQFIAIITSGFVAVGLALQGSLSNFASGIMILIFKPFRVGDTIEGNGEKGTVKNIGLFATTLNKANNEQAIIPNTQLFSNSIINYSREEKRRVYVLVGIGYSSDIQKAREVLLQIAKEEPKALPDPEPVVYVEELADSSVNLSLRYWCLTSEHAGCIFRTLETIKNRFDEAGIEIPFPQVQVHQ
>NC_013162.1|WP_015782172.1|1105091_1105928_-|leucine-rich-repeat-domain-containing-protein
MRKIFFFAFVAIALVSCRKNDDNGNEVNVSPNDYTLSADGLTLIKWTNSSTISIDMQGDSNLRKVNTIAENAFKDLKSLRAITFSDNLKEIGSDAFSGTNLSDGVNFNSYSDVVFGERVFYRSNIRKVVLPNTKALSNRIFAECRNLKEVTFKRTGIIGDGAFSSCGTLELVDLTDAGVTHIGKEAFANCKLLKKAVLSVTMNLKTIGDKSFANCTSLENVTILALYPPYLEGEPFSGIAKTKFPTFYIPRKPKDLLDIYKGDNNWKNLVDKIQLIPK
>NC_013162.1|WP_015782171.1|1103461_1104274_-|leucine-rich-repeat-domain-containing-protein
MRKVLLLALAMVALVSCRKSDDDSNGNSTADYELSADGRTLIKWKNANTTVLDMQADEKLRNVNTIGKEAFKEHQNLQSITFPNNLKEIEESAFEDANLSGEVIFNTKATVDFGEKCFYHTHLKKITFPNMSVLGINAFSVCRDLKEVTFNKVKKLGDLALRDCNAASLTFEGTGLTEIGHGALEGMWKLREVTLPETLTRIESDAFWQCIVLKKLTIKAVNPPALHINSIFGTNDKSVIPTIYVPKGSVEQYKKTAGWKDFAEKIQAIN
>NC_013162.1|WP_015782170.1|1102625_1103453_-|leucine-rich-repeat-domain-containing-protein
MRKLGNLRMRKVLLLALIGIALVGCRKSDDDNNGNSTADYELSADGRTLIKWKNANTTVLDMQADEKLRNVNTIGKEAFKEHQNLQSITFPNNLKEIEEGAFEEASLSGTVTFNTNATVVFGDKAFFKTKIRKLSLPNVKRLPYSVLSMSYNLEELHFNKLEILGFGAIGWNYLKEINLENTGLTDIETVGISGCTEMKSVVLPATLKTIGYDAFWYCQQLKTVTINAVNPPALVNNPFRATRIEKIYVPKGSVEQYKRATFWSAFSDKIYPKAQ
>NC_013162.1|WP_015782169.1|1101861_1102515_-|PorT-family-protein
MKRFLTVIAFLSITSIGFSQVAIGVRFSYPFTMIQSMRPVTPNVPSSSVSFGKFRNYLNAGGFIRIPVQERLTFQIEGMFSIAEVDFDGKYQGSSFHSGYRFVHFDMPFLLQYEGKRPIRGFVQTGFSPKFYLMREVSLDSSYDISFADTRRFKKSLLMWHIGAGILFERKHWIFTLDHRFSMSVFNVSEHNNKEFLDLSKAKFYFFSTSSGIAYKF
>NC_013162.1|WP_015782168.1|1100564_1101752_-|threonine-ammonia-lyase
MNFTTAREHLKSVLLPTHLIYSPLFSEESDNKIYIKPENLQKTGAFKIRGAYNKILKLTEEEKKKGVIASSAGNHAQGVAYAARELGIKAVIVMPKTTPLIKVQSTKKYGAEVVLYGDVYDDAYQKAKELEEKEGYVFVHPFNDPDVLEGQGTIALEILEELPNTDVIVVPIGGGGLISGIACAAKQLKPDIKIVGVEPSGAASATEALKKNKLVSLPEANTIADGTAVKRIGELNFEYIKKYVDEVVTVDDYELTEVFLLLAEKHKLIAENSGVLPLAALKKLTDRGKNVVPVVSGGNIDVLMISSMIGKGLVSRDRIFNFSVSIPDRPGELAKITQIIAEVGANVVKLAHNQFKNLSRFRDKEVLITVETNGTDHIQQLVRAFKDKGYEITAK
>NC_013162.1|WP_015782167.1|1098851_1100438_+|glycoside-hydrolase
MKKLYVLCILLIAFACKKDNDETLPLSAEKDILSFVFTVEGNTYSGTISNTTITAQLPEDTDVTTLTPTITVSKGATVSPNTGVAQNFSKEVTYTVTAENKSTKTYKVLVTTEKTEQPQVPIEIGHVPNEYTVNKAGGEVIFFEVNTLPVKKEQIKVKLLKYRSALSYDLKVQKIDKKERRVYVVLPATYKNGQYRFKATFDKEEVESGVFTLDSSEIVLDVLDINLFEGPVQTLATTNLQVFKVLVYANAEALKKYTYYLRKNGQDYQLTVAEMSGYNLEFKMFNTPAGAFSGGNDFKFVVKGGAKEQVLPFVNSDGQAINIVPTYAPVIKSLSATTLKTGDELTITGENFTYMSVGFNTNYRYCELLLIKNGETKVTLSTYNHRGTTATFKIDNNVESGTYKVVLSSQIHLKSEVFGQEITVQKVVPETPPRLKVKGTAELIDKDASFFAKQINIFFNEEIGNASIKAIVFPNLKIENMTRYPAAVSTHRLSDSEYDYLLKDLPKGYVLIEENGKEYKAEFSLRKV
>NC_013162.1|WP_015782166.1|1096497_1098756_+|hypothetical-protein
MKALPLLALFPLSLIAQNPIPAGSYKASSLGNALELRIGNNNTYELVGASGNYTLKDKKIEFSSDASSFLVEKKQSNSSQLQITFKIGTGLFGDPHFLYVGYENNKGEVEYVCVHNKITSLENVEKTKDSNGVGYYVLESFEVPRTENLYLVNAHSVAFNNKSKEVIIEKYPIGKTTNAVEVEFLGTNNMLNLKGTYNPDKGTISLTEGDSDNAILFSNKASTPNPAKVARSNKENVKNWKYLIAFEEEQDIPEYNPEKRAKQKSQADISLPKNLKTALASADKYSRLVIVFQQPDNKEAQQQFATLFAKYKEEGGSNGYPYELYLATTKDMKTLKAKGVPTGNQMAVLDVAGDLLYNQPSTIEEVANDEIVTSDSYGQQFGTIAMARALDKALGNPKLSVKDLQAIFTTFLKKDSQRVYLLAKNRPVQKTGDANEEEAFDYIAQEQEDYFSDFKNPKGIYQMQLTPEQVTTQWQRIVNAHKNDSKLDSAYAFLLALNSNDSDYYYRIFNAEKPASLADVDAIAYLVKFSEEIKVHNEKLIPKNDDYTDYQQRLEKGVIEANYGHFSTLLDRLVFNDKTLFEPVKAVYIEGVKKNVLTADDYIDFLYENNVEEASAYFSEYYKNLLKRDSNLIAALDKAFSESDEENSWKYYKMRFANRANNIAWKVYEEHKNDPAKLAEPYQWASSAVQLEPENPYYLDTLAHLLYTRGEKQEAIKLEEKAVKLLSKTNDEFESQRQEVKANLEKMKRGEM
>NC_013162.1|WP_174250640.1|1113994_1114654_+|hypothetical-protein
MNTIIILIFVLVVVSVYFIVQYKSNFEKHLAYHTPRLLSPERQEYIRGAERYIKKASIVIGLFVSFPLIVVCAFLLLDAGIPIFFLLLIFLIAIECLVIYLIYRILKRNIKNQQALLEQMSDSDFELLLSVQKELFLFKYFPPFMLCKDKLYLFVSLTVEEIDPTTIKEVGFVYARGGRVIVRIKSIKSTSIVMYRNVYPIFGEIIEKYNPNAQIKTLK
>NC_013162.1|WP_015782177.1|1114674_1115187_+|hypothetical-protein
MKDTIIIPFSKKKMLKLTGIYALIILGVAGVIALILSADTLNLYYLAFFLVLLIVTIILFFMGIKGLLSLKRSKGGVILTPEYLKSNVNLVGKWVGEIPWNEIAAIGRMKFYGIHIHIKLKHPENYLSRIKSKEIRNRFEGIQIDNSELEITFEELEGLINEYFAKYGNS
>NC_013162.1|WP_015782178.1|1115202_1115898_+|hypothetical-protein
MDIIYIICLAPLVIFIGIFLYLTIIRKNAFEERLVLFRPTHQLSQKRKTYMQGAHKYRKYASIALLVLFSFLLLILIFVMFKEDFEEIGSVYMVIFNKIKKLILFILLALIPIVLAYYLATYVLKRNEKAQHMLVEQMSDTDFETLLKVKDSLPSISKYSPPFVLCNKKLYIFLFYAIRKIDPTQITEINWENNKNSIFIRLKSPKRTMFTLSPTTFSYFLPIVEQYTKPK
>NC_013162.1|WP_015782179.1|1115917_1116592_+|hypothetical-protein
MDIIYLLCFVSLVLLLVFMYFTMVRKNEFEEHLALYRPQHQLSQKREAYLKKVRKFRLWVTGFIIVVFTAPLFVYLVLMIQEGVEVLHLLFADEIIGETLLSLLITFLLYWLFTFVLKRKEKALCMLVEQMSDSDFDLLLKVKDSLFILNRYNPPFVLCNKQLYFFIFYAIREIDPTKITDMGWGYSQNGLYVKIKSPKVTRITMSTGALPYLLQIIKKYNKKI
>NC_013162.1|WP_015782180.1|1117098_1118334_-|hypothetical-protein
MKRFLYIGLSALCLFTGCQKDNNSEDNGTLISNNTPFPMMAWIGLSPQSSTEAYQEMKQAGLNYNMYPYYSTLSQVKEALNKMQNLQMKSIVSCSELSTDTEATIKALKDHPAVAGWFMADEPSMKDLDKIAAKMKRFQQIDKKGICYVNFLSIDTSEKQLGASFNAYLEKATRTLPLQMLSSTFYPIVLNKGAKERTVNGLWYKNLEVFSAKAKELRIPLWTLVLSSSHPLGEGGYPEPTLADLRLQLYTNLAYGSQLMQFFTYTTPPDNLTYKAPIAPDGSKNATYYRLAQANAEVQKLSGVFVGAKMLNVWHTGKSIPAGTKRLVLPKNFEVLKTGDIGATVSLLQNGSRYYLMIVNHSPLKTLPLEIKATAEVQEVSKEARLLPVDWTTSKTYTLEAGDMRLFSWTK
>NC_013162.1|WP_041546701.1|1118621_1119044_+|hypothetical-protein
MKRTILMLLIVFGALSCSKEDIKRLEGKVDVTVYVKDNNGTPLKNWHVYAYDEWAWEHKSDSHPTFHAKQSVTDDEGIASFVLSVDVIDEQEVYQFVVYYTEGNAGKKNLSGTEITKNSLKTVKTVTLKAKEKSTITIAL
>NC_013162.1|WP_015782182.1|1119093_1119957_+|DNA-damage-inducible-protein-D
MDKNSVLQYKNLFDGITHYIESEDAKEKIEVWFARELQTILGYARWENFSVAIHRAVASCMSQQINVDDHFREVTKMVELGSGSKREIMDFMLTRYACYLIAQNGDPKKEEVAFAQSYFAVQTRKAELIEERLNLLSRLETRDKLRSAEKQLSQNIYERGVDDKGFARIRSKGDTALFGGHTTEDMKLRLGIKANRPLADFLPTLTIAAKNLATEMTNYNVESNDLHGESAITHEHVQNNQTVRQMLGQRGIKPEELSPAEDIKKLERKVARDEKMIAEHSQKLPKN
>NC_013162.1|WP_015782183.1|1119982_1122154_+|glutamine-synthetase-III
MLRFTALTTAQNRKPVAVPENGKRSELFAQNVFNEEAMRQLMTRDAFAAVMNAIHNGTKIDRRVADQVATAMRDWAISKGATHYTHWFQPLTGGTAEKHDAFFEPVTRDRAIERFGGGQLVQQESDASSFPNGGIRNTFEARGYTAWDPSSPPFVYGTVLCIPTIFIAYTGEALDNKTPLLKALSVIDQAATEVARYFDKNVSKVTTTLGCEQEYFLIDKALANTRPDLMITGRTLLGHQAAKGQQLDDHYLGAIPSRVLAFMRDLEQECLLLGIPVKTRHNEVAPNQFELAPIFEEANLAVDQNSLLMDVMRKVAERHDFVILFHEKPFAGVNGSGKHNNWSLVTDTGVNLLAPSKTPIKNLQFLTFFICTIKAVCEYEPLLRASVASATNDYRLGANEAPPAIVSVFIGEQLTQVLDALEVSSDNLSPEEKTELKLNVVGKIPDLFLDTTDRNRTSPFAFTGNKFEFRAVGSKANCGKPTMVLSTIVAQQLTEFKKAVDALIEGGKKKEDAIFKVLRRYIKESKKIRFEGDGYSKEWEEEAARRGLSNHKTTPEALKENISEKAVALFESTGVLSKVELLARYEIGLEEYVKTVQIESRVLGDIARNHVVPTAVRYQNTLIENVKGLKEIFGDSYQEVAAEQMELIRHISEHIKVIHSQVEAMVEARKHANHLPDFEAKADAYCNEVKPFFEIIRYHCDKLELMVDDELWTLTKYRELFFN
>NC_013162.1|WP_015782184.1|1122802_1124089_-|glutamate-1-semialdehyde-2,1-aminomutase
MLYKRSSELFAAAQQVLPGGVNSPVRAFNAVGGHPIFIKEAQGAYLTDEDNRKYIDYIASWGPLILGHAYPPVIEAVTERAKKGTSFGIPTEVEVQIAELAVSMVPHIDKIRFVNSGTEACMSAVRLARGYTGREKIIKFAGCYHGHSDAFLIEAGSGGATFGSPNSPGVTQGTAKDTLLANYNDLASVKTLFEANPQQIACVIIEPVAGNMGCVPPAEGFLEGLRQLCTENGALLIFDEVMTGFRLAKGGAQEVFGIKADIVTFGKVIGGGLPVGAFAANKEIMSYLAPEGPVYQAGTLSGNPLAMSAGLAMLTALNEQPEVFDSLAKKTSYLHEGFDNVLKRAGFPYQINSFGSMFTLFFAEEPVTDFASSAKSNTARFRKYFHGMLREGIYLPPSAFESYFLNDALTYEDLDKTIGALNRVIMEL
>NC_013162.1|WP_015782185.1|1124150_1125077_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MNKLLILGSIAFDQIETPFGKSNAIMGGSANYIALAAAQFEVPSAVVSIVGDDYPQDYLNLLSQRHIDVSGIEIVHGGKTLFWSGKYRNDMNQRDTLDTQLNVLTNFKPVVPEAFRNAEVLLLGNLHPTLQMDVLDQMLSRPKLVVMDTMNYWMNHTWDLLMEVVARVDMITINDEEARQLTKEYSLVKAAQRIMAMGVKFVVIKKGEHGALLFHDDKVFFAPALPLAEVFDPTGAGDAFAGGLVGYLTKTRDYSFSNLKNAIVHGSNIASFCIEKFGAERLLTLTQDERHARLQQFRDLTQFDIQLK

Crispr_ID: NC_013162_7

• CRISPR_ID: NC_013162_7
• CRISPR_location: 1134211-1134311
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013162_7

Consensus_repeat	Method
GAGAGCGGAGTATGTGAGAGGGGG	CRISPRCasFinder

spacers of NC_013162_7

>7.1|1134235|53|NC_013162|CRISPRCasFinder
GAGGTTTCCTCCGCTTTTCCGTCACCACATTCCCCTTTTGAACGGAAGTCCGC

CRISPR arrays and Neighbor proteins around NC_013162_7

CRISPR arrays

The CRISPR arrays of NC_013162_7

>merge|NC_013162|7|1134211-1134311|CRISPRCasFinder
GAGAGCGGAGTATGTGAGAGGGGGGAGGTTTCCTCCGCTTTTCCGTCACCACATTCCCCTTTTGAACGGAAGTCCGCGGAAGCGGAGTATGTGAGAGGGGG

>NC_013162|7|6|1134211-1134311|CRISPRCasFinder
GAGAGCGGAGTATGTGAGAGGGGG	GAGGTTTCCTCCGCTTTTCCGTCACCACATTCCCCTTTTGAACGGAAGTCCGC
GGAAGCGGAGTATGTGAGAGGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_015782193.1|1140987_1142733_+|pyruvate-oxidase	unknown	unknown	gnl|CDD|181661
NC_013162.1|WP_015782187.1|1126702_1127755_-|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NC_013162.1|WP_015782185.1|1124150_1125077_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl|CDD|238921
NC_013162.1|WP_015782195.1|1143778_1144723_+|cation-transporter	unknown	unknown	gnl|CDD|224151
NC_013162.1|WP_015782196.1|1144780_1145164_+|four-helix-bundle-protein	unknown	unknown	gnl|CDD|183395
NC_013162.1|WP_009419563.1|1129670_1130474_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782197.1|1145181_1145802_-|DUF502-domain-containing-protein	unknown	unknown	gnl|CDD|225480
NC_013162.1|WP_041546932.1|1127744_1128707_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782191.1|1136239_1138447_+|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl|CDD|377178
NC_013162.1|WP_015782182.1|1119093_1119957_+|DNA-damage-inducible-protein-D	unknown	unknown	gnl|CDD|183178
NC_013162.1|WP_015782183.1|1119982_1122154_+|glutamine-synthetase-III	unknown	unknown	gnl|CDD|226477
NC_013162.1|WP_015782192.1|1138443_1140726_+|aconitate-hydratase	unknown	unknown	gnl|CDD|235974
NC_013162.1|WP_015782186.1|1125338_1126718_+|O-antigen-ligase-family-protein	unknown	unknown	gnl|CDD|377422
NC_013162.1|WP_015782198.1|1145813_1146728_-|glutaminase	unknown	unknown	gnl|CDD|234880
NC_013162.1|WP_015782184.1|1122802_1124089_-|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl|CDD|234607
NC_013162.1|WP_015782189.1|1128706_1129690_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782190.1|1130553_1133865_-|DUF2723-domain-containing-protein	unknown	unknown	gnl|CDD|378545
NC_013162.1|WP_009418207.1|1134953_1136237_+|citrate-synthase	unknown	unknown	gnl|CDD|99867
NC_013162.1|WP_015782199.1|1146734_1148030_-|gliding-motility-associated-protein-GldE	unknown	unknown	gnl|CDD|274626
NC_013162.1|WP_015782194.1|1143023_1143587_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_015782186.1|1125338_1126718_+|O-antigen-ligase-family-protein	gnl|CDD|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	0.000975703
NC_013162.1|WP_015782185.1|1124150_1125077_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl|CDD|238921	cd01946, ribokinase_group_C, Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.	1.66016e-130
NC_013162.1|WP_015782195.1|1143778_1144723_+|cation-transporter	gnl|CDD|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	1.36647e-84
NC_013162.1|WP_015782192.1|1138443_1140726_+|aconitate-hydratase	gnl|CDD|235974	PRK07229, PRK07229, aconitate hydratase; Validated.	0
NC_013162.1|WP_015782197.1|1145181_1145802_-|DUF502-domain-containing-protein	gnl|CDD|225480	COG2928, COG2928, Uncharacterized conserved protein [Function unknown].	6.48746e-24
NC_013162.1|WP_015782193.1|1140987_1142733_+|pyruvate-oxidase	gnl|CDD|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NC_013162.1|WP_015782182.1|1119093_1119957_+|DNA-damage-inducible-protein-D	gnl|CDD|183178	PRK11525, dinD, DNA-damage-inducible protein D; Provisional.	4.28709e-138
NC_013162.1|WP_015782183.1|1119982_1122154_+|glutamine-synthetase-III	gnl|CDD|226477	COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only].	0
NC_013162.1|WP_015782196.1|1144780_1145164_+|four-helix-bundle-protein	gnl|CDD|183395	PRK12275, PRK12275, hypothetical protein; Reviewed.	1.1541e-32
NC_013162.1|WP_015782187.1|1126702_1127755_-|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	3.19526e-14
NC_013162.1|WP_015782198.1|1145813_1146728_-|glutaminase	gnl|CDD|234880	PRK00971, PRK00971, glutaminase; Provisional.	2.86449e-156
NC_013162.1|WP_015782184.1|1122802_1124089_-|glutamate-1-semialdehyde-2,1-aminomutase	gnl|CDD|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	0
NC_013162.1|WP_015782191.1|1136239_1138447_+|NADP-dependent-isocitrate-dehydrogenase	gnl|CDD|377178	pfam03971, IDH, Monomeric isocitrate dehydrogenase. NADP(+)-dependent isocitrate dehydrogenase (ICD) is an important enzyme of the intermediary metabolism, as it controls the carbon flux within the citric acid cycle and supplies the cell with 2-oxoglutarate EC:1.1.1.42 and NADPH for biosynthetic purposes.	0
NC_013162.1|WP_015782190.1|1130553_1133865_-|DUF2723-domain-containing-protein	gnl|CDD|378545	pfam11028, DUF2723, Protein of unknown function (DUF2723). This family is conserved in bacteria. The function is not known.	7.62057e-82
NC_013162.1|WP_009418207.1|1134953_1136237_+|citrate-synthase	gnl|CDD|99867	cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like. CS catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or Krebs cycle). The overall CS reaction is thought to proceed through three partial reactions and involves both closed and open conformational forms of the enzyme: a) the carbanion or equivalent is generated from AcCoA by base abstraction of a proton, b) the nucleophilic attack of this carbanion on OAA to generate citryl-CoA, and c) the hydrolysis of citryl-CoA to produce citrate and CoA. There are two types of CSs: type I CS and type II CSs. Type I CSs are found in eukarya, gram-positive bacteria, archaea, and in some gram-negative bacteria and are homodimers with both subunits participating in the active site. Type II CSs are unique to gram-negative bacteria and are homohexamers of identical subunits (approximated as a trimer of dimers). Some type II CSs including EcCS are strongly and specifically inhibited by NADH through an allosteric mechanism. Included in this group is an NADH-insensitive type II Acetobacter acetii CS which has retained many of the residues used by EcCS for NADH binding.	0
NC_013162.1|WP_015782199.1|1146734_1148030_-|gliding-motility-associated-protein-GldE	gnl|CDD|274626	TIGR03520, GldE, gliding motility-associated protein GldE. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldC is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. GldE was discovered because of its adjacency to GldD in F. johnsonii. Overexpression of GldE partially supresses the effects of a GldB point mutant suggesting that GldB and GldE interact. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Not all Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility and in fact some do not appear to express the gliding phenotype.	0

Protein sequences

>NC_013162.1|WP_015782190.1|1130553_1133865_-|DUF2723-domain-containing-protein
MTDNQFKKYNLIVGWAVFAVALITYGLTVEPTVSFWDCGEYIATSAKLEVGHPPGAPLFQMMGAFIAAFAPNSDKIALFVNYMSVLSSAFTVLFLYFIIVNLTKKIALKRTDSVEEKTPATLTQGQFIAVLGSGVVGALAYTFSDSFWFNAVEAEVYAMAMLFMSAMFWVGIKWTDSLHEPRGDRWLLLISLVVGLSFGVHFMALLTIPAIGMLYFFKSNYKKTVVNFIIANVVSIAILLLIFKLILPYTLAYFGYLEVFFVNSFGMPFNSGTIIAGLSVIAFFYFTLNYAYKQNKVRLQTGFLCLLFVFIGFSSWLMIPIRANADTVINENSPTDARLLLAYYNLEQYPETHLFYGPMYSDKYAGLDEENPYEDAKPKYERDYALGKYIIVNQYKNAQMASNSKQEGVLPRMWSAQHAANYMKLTGLLTFRIKEEAYNEPKLYQFLQEVQRQMQIQPLPPERYDQFLTEYRDYIEVEKPSFWKNMHYLFEYQFGYMYFRYFAWNFIGRQDDVQGKMENDHGNWLSGIKPIDSLRLGSQDNLPADVLNNKARNTYYFLPLLLGLLGLFFMATKSERQTWVVMMLFLFTGLAMKIYLNERPFEPRERDYPLVGSFYAFAIWIGVGVYALFHALRRVLSSRIGAPLAVVASLLAVPVLMASENWDDHNRSQKYSAEFIADAYLSSVVKDKDAMIFTIGDNDTFLLWYAQEIEGYRTDVRIINTSLLQTDWYIDQMKRQAYQSSPIPGEMVHKQYAHGVREGVYFQKRTENRWNIKDFVKWVTSDDPNTQLSSSSSESRTFNYYPTNKIRIPVNKENVLKSGIVKPEDADKIVDYIDITLPSAIDKARIVMLDILAYNDWKRPIYFSGGSMDSAEYIWMKEYLQLDGLVYKLVPIKTEIDKNHPFDMGRIDSNLMYDIIKKWDWGNMGKAGIYLDPETRKNSIIFRGNLARLTEKLIEEGKLNKAKDILDIGMKHMPLEAYGYYFTLDPFVQGYFRVGEKETARKLALQIFGKYQEELNYYAHLSPDERYANTARIQYTIDRYGELLLLIAPLDKDFYERQVEVLRAKASPFMKSQELDEYMKMLMDEEADTLVQAGAEKDSGKSE
>NC_013162.1|WP_009419563.1|1129670_1130474_-|hypothetical-protein
MVNIVIPIYKEEPSGNDIISIKRVFRVLKEYPITFVHPKSLDIRAYEEFGKVTFRDFDDAYFKSIDGYNQLMLSIDFYEAFTEKYILIYQTDAYIFRDDLLFWCKKDYDYIGAPWIRRREKAPIIKKIWDSSICFIKQAINYKGNRKTQKNKILLYNEVGNGGFSLRKREKFIEVLKQLTEQTAVYLKPSNRSTFYAEDVFFSIEPKRNGIDFKKPNYKEACLFSIENKVRKALAFNNQILPMGCHRWEKENREIWAQFIKDETEGF
>NC_013162.1|WP_015782189.1|1128706_1129690_-|hypothetical-protein
MKQKDFEGKTIIIAMPNHFGLLEQFKDNLEFLGFEVFVLDISNRTNAISLKDKITHGYKKLFFGDRSYKPSIKNKKAKEDILIQLSHIKKTDYALFIRPDLFDFEVIDKVKQISKKTVAYQWDGLNRYPLAKKYINLFDKFYVFDKKDLNLSRRLKHTTNFYFDNIISKEVVTPKTVFFVGTYMKNRVLLLEQISTLLENKGLIPNIFLVSQRKKSYHYKFKIIDKEFSFKESILKMQKSEYLLDLHNPIHNGLSFRTFESIGYSKKLITNNLLVKEYDFYDPNNIFIIEKGSFDNIDEFLNAPYQPLEKEIQDKYSFSSWIKQLLK
>NC_013162.1|WP_041546932.1|1127744_1128707_-|hypothetical-protein
MKRKLLFIAPDYYGFNEVVLKGLKEYSDCDVSYIVSNFKYQYKNWGERIYNFFLKTLLGRNLKEKKKDEYIKEFIKFINESNDYDILLINAPYLLTNNQIEIALKKTKLSVVIFWDSIEKIPMQKKYLEDFDIIYSFEPDDCVKYHLKKITNFYFAESNNDSNNLYDVCYLATYDERIKVAERIFKYFDEHNISVKGKMFARRRQRLPKSIERIKEIIPFSKSYKYYLDSKIILDIAHPHQKGLSFRPYEAIGLRKKLITTNKDIVNYDFYNPNNIFVIEDIDNITIPLEFFKTDYQEIDIKLREKYHIKNWIHNIINGN
>NC_013162.1|WP_015782187.1|1126702_1127755_-|glycosyltransferase
METKILFLCPNNNFMSGGVKQIFRQAETLKKNGFNASVLLQGKSKQKWFHSDAQISHSPYLFKLLKYILGNRKITFIKKIKLWFLNKRSIPIDKNTILVFPEIYGDKIDKIAPNIKKVIFNQNCYYTFNHYFFEKEYTQTPYNNPNILATIVASKDALTYMNYTFPKLNTYKMTLGIDTSIFSYSSKKQKQICFMPRKLTDDVRQVILILKLRGVLRNWNLVSIDNKNELEVANIMKQSVFFLSFNHREGFGLPPIEAMACGCYVIGYHGEGGREYFNPKFSSPIEGGNIIEYVKKVEELLLIYEKSPEIIIGKGKKASDFVLSNYSMEREEKDTISIWNKILHLFQPLL
>NC_013162.1|WP_015782186.1|1125338_1126718_+|O-antigen-ligase-family-protein
MINKLLKNWIFLLSLLVIVLAFFLSYIFPDLWIREGFSNGFFKGGFYFCGFFSALWLLQNHLILFRKEECLRSLIICVGAATVFLWTYKHKITFRMDLLLLFLCGFYSLVYRKWIMPDRVMIVFFLLIILRFLGILWAEDKAFAWQDVNTDKLYFLLLVLITCIGFRIKEQESMSFITLCFKLFLLLLTLNISAYIFIQKAINLYFFSFLAFNKGYMNYYELLLGWSIFKHPSFIAWIMLVIWGLGVLVWRKNKELISLPEVILYGVLLFCFVFMLQARVAIIGFPLCLLILGWFYISKEWTIRKRIITEIGLFSMGLLGIYWLVTHTTFFADSAREKMLIKAKESINHHFIIGAGTSYEKLLANETIGLVHIHNDFLATFIDLGMVGFSLLLLWIFTIYQKGIYNRDNYIIYCLMTFLLFMNTDVVLNYQPGVLILLPFLIFVFFKQEKTLNLYYNKG
>NC_013162.1|WP_015782185.1|1124150_1125077_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MNKLLILGSIAFDQIETPFGKSNAIMGGSANYIALAAAQFEVPSAVVSIVGDDYPQDYLNLLSQRHIDVSGIEIVHGGKTLFWSGKYRNDMNQRDTLDTQLNVLTNFKPVVPEAFRNAEVLLLGNLHPTLQMDVLDQMLSRPKLVVMDTMNYWMNHTWDLLMEVVARVDMITINDEEARQLTKEYSLVKAAQRIMAMGVKFVVIKKGEHGALLFHDDKVFFAPALPLAEVFDPTGAGDAFAGGLVGYLTKTRDYSFSNLKNAIVHGSNIASFCIEKFGAERLLTLTQDERHARLQQFRDLTQFDIQLK
>NC_013162.1|WP_015782184.1|1122802_1124089_-|glutamate-1-semialdehyde-2,1-aminomutase
MLYKRSSELFAAAQQVLPGGVNSPVRAFNAVGGHPIFIKEAQGAYLTDEDNRKYIDYIASWGPLILGHAYPPVIEAVTERAKKGTSFGIPTEVEVQIAELAVSMVPHIDKIRFVNSGTEACMSAVRLARGYTGREKIIKFAGCYHGHSDAFLIEAGSGGATFGSPNSPGVTQGTAKDTLLANYNDLASVKTLFEANPQQIACVIIEPVAGNMGCVPPAEGFLEGLRQLCTENGALLIFDEVMTGFRLAKGGAQEVFGIKADIVTFGKVIGGGLPVGAFAANKEIMSYLAPEGPVYQAGTLSGNPLAMSAGLAMLTALNEQPEVFDSLAKKTSYLHEGFDNVLKRAGFPYQINSFGSMFTLFFAEEPVTDFASSAKSNTARFRKYFHGMLREGIYLPPSAFESYFLNDALTYEDLDKTIGALNRVIMEL
>NC_013162.1|WP_015782183.1|1119982_1122154_+|glutamine-synthetase-III
MLRFTALTTAQNRKPVAVPENGKRSELFAQNVFNEEAMRQLMTRDAFAAVMNAIHNGTKIDRRVADQVATAMRDWAISKGATHYTHWFQPLTGGTAEKHDAFFEPVTRDRAIERFGGGQLVQQESDASSFPNGGIRNTFEARGYTAWDPSSPPFVYGTVLCIPTIFIAYTGEALDNKTPLLKALSVIDQAATEVARYFDKNVSKVTTTLGCEQEYFLIDKALANTRPDLMITGRTLLGHQAAKGQQLDDHYLGAIPSRVLAFMRDLEQECLLLGIPVKTRHNEVAPNQFELAPIFEEANLAVDQNSLLMDVMRKVAERHDFVILFHEKPFAGVNGSGKHNNWSLVTDTGVNLLAPSKTPIKNLQFLTFFICTIKAVCEYEPLLRASVASATNDYRLGANEAPPAIVSVFIGEQLTQVLDALEVSSDNLSPEEKTELKLNVVGKIPDLFLDTTDRNRTSPFAFTGNKFEFRAVGSKANCGKPTMVLSTIVAQQLTEFKKAVDALIEGGKKKEDAIFKVLRRYIKESKKIRFEGDGYSKEWEEEAARRGLSNHKTTPEALKENISEKAVALFESTGVLSKVELLARYEIGLEEYVKTVQIESRVLGDIARNHVVPTAVRYQNTLIENVKGLKEIFGDSYQEVAAEQMELIRHISEHIKVIHSQVEAMVEARKHANHLPDFEAKADAYCNEVKPFFEIIRYHCDKLELMVDDELWTLTKYRELFFN
>NC_013162.1|WP_015782182.1|1119093_1119957_+|DNA-damage-inducible-protein-D
MDKNSVLQYKNLFDGITHYIESEDAKEKIEVWFARELQTILGYARWENFSVAIHRAVASCMSQQINVDDHFREVTKMVELGSGSKREIMDFMLTRYACYLIAQNGDPKKEEVAFAQSYFAVQTRKAELIEERLNLLSRLETRDKLRSAEKQLSQNIYERGVDDKGFARIRSKGDTALFGGHTTEDMKLRLGIKANRPLADFLPTLTIAAKNLATEMTNYNVESNDLHGESAITHEHVQNNQTVRQMLGQRGIKPEELSPAEDIKKLERKVARDEKMIAEHSQKLPKN
>NC_013162.1|WP_009418207.1|1134953_1136237_+|citrate-synthase
MENTAKLIFEGKEYEFPIVVGTENEKAINIEKLRALTGLVTLDSGYKNTGSCKSAITFLDGERGILRYRGYNIEDLAAKAEFLEVAYLLIFGELPTAEEYDDFKKTIHKYTLVHEDMRHIMDGFPRSAHPMGVLASATSALTAFNPVPVNVHCPKNVYQAVCKAIAKVTIIASWVYRKREGLPLNYYDNSKGYIENILRLFFEIPTEEYKINPTVVSALNKLLILHGDHEQNCSTSTVRLVGSSEAGLFASISSGVSALWGRLHGGANQAVIEMLEEIHKDGGDVDKFINKAKDKNDPFRLMGFGHRVYKNFDPRAKIIKVAADDVLNALGIEDPIFSIAKHLEKVALEDDYFKSRNLYPNVDFYSGIIYKALGMHLEMFTVLFAIGRLPGWIAQWKEMRQGGEPIGRPRQIYVGATERAFVELNKR
>NC_013162.1|WP_015782191.1|1136239_1138447_+|NADP-dependent-isocitrate-dehydrogenase
MKNIIYTITDESPYLATHSLLPIIKRFCASSGINFEAKDISLAGRILATFPDFLTAEQRVPDALSELGALATCPEANIIKLPNISASVPQLKAAIAELQSQGYALSDYPENPTNEAETAIKQRYDKVKGSAVNPVLREGNSDRRAPKSVKQYAQTHPHSMGAWSAESLTEVATMQAGDFYHNEQSVTLQKADVVRIELVSPKHEVQVLKAELPLQAGEVIDATFMSKEALCKFYKKTFAEAKDKGVLLSLHLKATMMKVSDPILFGYAVETYFANLFQKHPRELKALGVNARNGLSDILAKIEQLPAEEQEPLKHDIEGALTRAAALAMVNSDRGITNLHFPNDVIVDASMPAMIRNGGKMWNAKGEAQDTLAVLPDSTYARIYQVVIDFCKKHGAFNPATMGSVANVGLMAQKAEEYGSHDKTFEIPHSGRVQVVGTDGKVYLSHKVEKGDIWRMCTAKDAAIQDWVKLAVTRARLSKTPAVFWLDEHRAHDAQLIKKVKHYLATRDTEGVDIRIMSPETAMLFTLERTRKGKDTISVTGNVLRDYLTDLFPILELGTSAKVLSIVPLMNGGGLFETGAGGSAPKLTEQFLAENHLQWDSLGEFLALGASLEHFAQKHENPKALILAQTLDEATSKLLNNDKSPQVKVGTLDNRGSHFYLALYWAEALVAQTQDSALAKEFAPIAKALKDNEETIVEELTRIQGMPVELGGYYHPDFTKVATVMQGSKTLKKIL
>NC_013162.1|WP_015782192.1|1138443_1140726_+|aconitate-hydratase
MIFDIEMIKKVYAQFPERVDKARQVVGRPLTLAEKILYTHLWDGTRWRELVARAFVRGKDYVNFAPDRIACQDATAQMALLQFMQAGKSKVAVPTTVHCDHLIQAKEGAATDLKVATEQSKEVFDFLSSVSNKYGIGFWKPGAGIIHQIVLENYAFPGGMMIGTDSHTVNAGGLGMLAIGVGGADAVDVMAGMPWELKFPKLIGVKLTGKLSGWTAPKDVILKVADILTVKGGTGAIVEYFGEGAKSLSCTGKGTICNMGAEIGATTSTFGYDEAMRRYLLATGREEVALAADAIAPYLTADPEVYADPEKFFDQLIEIDLSTLEPYINGPFTPDRGTPVSKMKEVARENDWPLEVQWGLIGSCTNSSYEDLTRAVSVVKQALEKRITPKASFGINPGSEQIHYTTERDGIIDAFEQLGTRVFTNACGPCIGQWDREGAEKQEKNTIVHSFNRNFSKRADGNPNTHAFVASPEIVAALAIAGRLDFNPITDTLLNDQGEAVKLTPPYGEELPSKGFAVDDPGYQAPAEDGSNIEVVVSPTSNRLQLLTPFAPWDGKNIIGAKLLIKAQGKCTTDHISMAGAWLRFRGHLDNISNNMLIGAVNAFNGKTNSVKNQLTGEYDEVPKVQRAYKAAGIPSIVVGDHNYGEGSSREHAAMEPRHLGVRAVLVKSFARIHETNLKKQGMLALTFANEADYDKIQEDDVINFLDLTSFAPGTPLHLEFVHKDGSKDVITCNHTYNAQQIGWFKAGSALNQLKEKSER
>NC_013162.1|WP_015782193.1|1140987_1142733_+|pyruvate-oxidase
MSKNVSDQLVEMLVQAGVKRVYAITGDSLNPVNDAIRRDGRLEWIHVRHEESAAYAASMDAELNGIGCCMGSSGPGHVHLINGLYDANRSGNPVIAIASTCATHKFGTHWFQETNPFLLFQDCSKYVYVANTPKQFTTMMQRAIQTAINEKGVAVLGLPGDVAGADLEEVPTATQTFLAKPVVRPSDSELDKLSAVLNDAKNKKIALYCGHGCQYAVKEVEQLAETLKAPIVASFRGKIFFDRTDSPYIAGMNGLLGHRSGYDACAKADVLVMLGTDFPYAEFLPKKNTIIQIDERPDIIGRRAKVDYGFAGDVKDTITALLPKLTPRTDDSFLKDIHKEYLDLEKSLDDYTKKKTEENQIDPEYAAKLLDKYAANDAIFTVDTGMNVVWAARFIKGTGKRYLTGSFNHGSMANALPMAIGAAASSKGRQVVAMCGDGGLSMLLGDLATLMQYQYPVKIFVFNNRSLAMVKLEMEVSGYLDWQTNMVNPPFDKLADLMNIKGYEVRKTEDLEATVKAAFEHDGPTLVNIYTNRDTLAMPPHITFEQMKGFATNIIKKIGQGDFAEAKGSITNSMKHIKDVF
>NC_013162.1|WP_015782194.1|1143023_1143587_+|hypothetical-protein
MAKSRNNVVTEGLSGMLARQIVFRQRAGQTIVGKAPVRSQKVSQAQQLHQQRFARAAFYAKSALQNSALKQSYAEEAKKRPGTTPYNMAIADYLKAPVIDAVDTSNYTGSVTGEKIVVQVSDTFKVTGVKVKITDHDATLVEEGNATFQEGKWVYTTTVVNASLTGDKVIVTATDRPANVTTKEFIL
>NC_013162.1|WP_015782195.1|1143778_1144723_+|cation-transporter
MEHSHHQHDHHHHGHDHHHHTVTDLSTLNRAFYVGIGLNLLYTIIEFAVGFRVDSLALISDASHNLSDVASLVISLIGMKLTHRTATQLYTYGYKKASILASLINAVLLMYIVIKIFIEAFERLANPPEMVGSAIMLTAFIGVIINAVSAFLFYKGQKTDINVKGAFLHLMLDALVSVGVIISGAIVYFTGWNLADPISSFMVGIVILFSTWGLLKESVKLILDGVPHDIDKEHIQHLIEEHPMIESVHHLHIWALSSLQNALTAHIVLKECITLKEFMNIKAELKHKLSHEGITHSTFEIDTDNCHCEEEKCN
>NC_013162.1|WP_015782196.1|1144780_1145164_+|four-helix-bundle-protein
MKENILKTKSLDFAIRIVNLYKYLYESKKEFVLSKQILRSGTSVGAMICEAEHSESAADFVHKIAISQKEINETLYWLELLCKTNYITANEFESIKEDAIEVAKIISSSIKTAKNNIKAKANSLNKQ
>NC_013162.1|WP_015782197.1|1145181_1145802_-|DUF502-domain-containing-protein
MSKNYFSTFIKYFFQGILIIGPLSATIWIIWSIFKSVDNLVPDISKAYPGLVFALVLLGTAIIGFIGSRLILGKLFVGLLDYLVAHIPGVKIIYSSIKDILASFVGDKRKLTNPVWVKVNETPEIWRIGFLTQPSMDFAELSEMVSVYLPHSYAISGWVIVTSKDNIKPAEGFSSQKAMEFALSGGILSNTSNANNANNASNTSNK
>NC_013162.1|WP_015782198.1|1145813_1146728_-|glutaminase
MKYSKIIDTIYQSVLSADNLGKVPTYIPELAQVNPDKFGVYFYSLNKQSYGIGDCDEKFSAQSISKVLALSLAYSIIGDQLWRRVDVEPSGTSFNSLIQLEADNGIPRNPLINSGAIVVCDILLSILEDAQADFLTFVRELANDDSINYSILVAESEKSVGYRNFALCYYIKSLGNIENDPIEVLNFYFKLCSLELTCKSMAYIFSFLANDGIRMHDRVQILTETCTKRVNALMQTCGFYDESGEFAFKVGLPGKSGVGGGIVALLPNQYSIAVWSPKLNNKGNSYRGMKFLEEFTAQTHTSIF
>NC_013162.1|WP_015782199.1|1146734_1148030_-|gliding-motility-associated-protein-GldE
MPFLSIDVGIVIQFAVFILLLFCSALISGAEVALFSLTPAEIETLKEEKTPTGNIIAKLTENPKKLLATVLIANNLVNISIVLLFVDLGDFLFGGITTPWVRAVLDVGVVTFVLLLCGEILPKIYANRNNILFSQRVAYFIYILDSFFTPISMPMKNFTVWIQKKLGKQKSNISVGQLSQALELASEEDTTNEEKKILEGIVSFGNTETREVMVPRVDIFALSEELSYQELLNEIVAIGYSRIPVYHENLDHITGVIYIKDLLPHLDKTDFDWNSVKRNAFFVPENKKLDDLLSEFQEKKIHLAVVVDEYGGTCGVITLEDIIEEIVGNINDEFDDEDVTHFKINDNVFIFEGKTVLKDFYRILEFTDEEEALFDENRGDAETLAGFLLEISGNFPQKGTPILFGNYKFIVEAFDKKRIKQIKIIRTNNPQ

Crispr_ID: NC_013162_8

• CRISPR_ID: NC_013162_8
• CRISPR_location: 1172414-1172497
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013162_8

Consensus_repeat	Method
GCCTATGGCCTGAGGCCTCACATTTA	CRISPRCasFinder

spacers of NC_013162_8

>8.1|1172440|32|NC_013162|CRISPRCasFinder
TCGCTTTTTCGTCGCCATTCCTAGTGCCTGTG

CRISPR arrays and Neighbor proteins around NC_013162_8

CRISPR arrays

The CRISPR arrays of NC_013162_8

>merge|NC_013162|8|1172414-1172497|CRISPRCasFinder
GCCTATGGCCTGAGGCCTCACATTTATCGCTTTTTCGTCGCCATTCCTAGTGCCTGTGGCCTATGGCCTGAGGCCTCACATTTA

>NC_013162|8|7|1172414-1172497|CRISPRCasFinder
GCCTATGGCCTGAGGCCTCACATTTA	TCGCTTTTTCGTCGCCATTCCTAGTGCCTGTG
GCCTATGGCCTGAGGCCTCACATTTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_015782211.1|1163173_1165117_+|threonine--tRNA-ligase	unknown	unknown	gnl|CDD|234752
NC_013162.1|WP_015782210.1|1160554_1161832_-|sodium:proton-antiporter	unknown	unknown	gnl|CDD|224671
NC_013162.1|WP_015782215.1|1171162_1171885_-|methyltransferase	unknown	unknown	gnl|CDD|226608
NC_013162.1|WP_049756971.1|1173735_1174656_+|acyltransferase	unknown	unknown	gnl|CDD|282319
NC_013162.1|WP_041546709.1|1178965_1181032_-|beta-galactosidase	unknown	unknown	gnl|CDD|224786
NC_013162.1|WP_015782209.1|1158363_1160328_-|alpha-amylase-C-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|215246
NC_013162.1|WP_106096058.1|1165208_1165706_+|translation-initiation-factor-IF-3	unknown	unknown	gnl|CDD|234582
NC_013162.1|WP_009411004.1|1178302_1178635_+|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133393
NC_013162.1|WP_015782220.1|1177507_1178287_+|DUF695-domain-containing-protein	unknown	unknown	gnl|CDD|368292
NC_013162.1|WP_015782216.1|1172609_1173017_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_002674637.1|1166111_1166456_+|50S-ribosomal-protein-L20	unknown	unknown	gnl|CDD|179959
NC_013162.1|WP_015782219.1|1176132_1176366_-|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl|CDD|224739
NC_013162.1|WP_009417378.1|1174778_1174979_-|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl|CDD|224739
NC_013162.1|WP_002675822.1|1176496_1177471_+|M23-family-metallopeptidase	unknown	unknown	gnl|CDD|366703
NC_013162.1|WP_015782214.1|1170842_1171100_-|flagellar-motor-switch-protein-FliM	unknown	unknown	unknown
NC_013162.1|WP_015782213.1|1170526_1170850_-|type-II-toxin-antitoxin-system-YafQ-family-toxin	unknown	unknown	gnl|CDD|379750
NC_013162.1|WP_015782217.1|1173016_1173535_+|J-domain-containing-protein	unknown	unknown	gnl|CDD|223560
NC_013162.1|WP_002674635.1|1165813_1166011_+|50S-ribosomal-protein-L35	unknown	unknown	gnl|CDD|234676
NC_013162.1|WP_009421835.1|1175081_1175942_+|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|180446
NC_013162.1|WP_015782212.1|1166561_1170500_-|DUF4011-domain-containing-protein	unknown	unknown	gnl|CDD|224037

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_015782211.1|1163173_1165117_+|threonine--tRNA-ligase	gnl|CDD|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NC_013162.1|WP_015782210.1|1160554_1161832_-|sodium:proton-antiporter	gnl|CDD|224671	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion].	1.16887e-53
NC_013162.1|WP_015782215.1|1171162_1171885_-|methyltransferase	gnl|CDD|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	1.36237e-58
NC_013162.1|WP_049756971.1|1173735_1174656_+|acyltransferase	gnl|CDD|282319	pfam04443, LuxE, Acyl-protein synthetase, LuxE. LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyzes the formation of an acyl-protein thioester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalyzed bioluminescence reaction A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The carboxyl terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction. This family also includes Vibrio cholerae RBFN protein, which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid.	6.70807e-09
NC_013162.1|WP_041546709.1|1178965_1181032_-|beta-galactosidase	gnl|CDD|224786	COG1874, LacA, Beta-galactosidase [Carbohydrate transport and metabolism].	6.88163e-09
NC_013162.1|WP_015782209.1|1158363_1160328_-|alpha-amylase-C-terminal-domain-containing-protein	gnl|CDD|215246	PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme.	0
NC_013162.1|WP_106096058.1|1165208_1165706_+|translation-initiation-factor-IF-3	gnl|CDD|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	1.50435e-80
NC_013162.1|WP_009411004.1|1178302_1178635_+|MerR-family-transcriptional-regulator	gnl|CDD|133393	cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators. Putative helix-turn-helix (HTH) MlrA-like transcription regulators (subgroup 2), N-terminal domain. The MlrA protein, also known as YehV, has been shown to control cell-cell aggregation by co-regulating the expression of curli and extracellular matrix production in Escherichia coli and Salmonella typhimurium. These proteins belong to the MerR superfamily of transcription regulators that promote expression of several stress regulon genes by reconfiguring the spacer between the -35 and -10 promoter elements. Their conserved N-terminal domains contain predicted HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	9.9193e-34
NC_013162.1|WP_015782220.1|1177507_1178287_+|DUF695-domain-containing-protein	gnl|CDD|368292	pfam05117, DUF695, Family of unknown function (DUF695). Family of uncharacterized bacterial proteins.	9.3094e-47
NC_013162.1|WP_002674637.1|1166111_1166456_+|50S-ribosomal-protein-L20	gnl|CDD|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	9.80658e-61
NC_013162.1|WP_015782219.1|1176132_1176366_-|twin-arginine-translocase-TatA/TatE-family-subunit	gnl|CDD|224739	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion].	3.09801e-12
NC_013162.1|WP_009417378.1|1174778_1174979_-|twin-arginine-translocase-TatA/TatE-family-subunit	gnl|CDD|224739	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion].	7.92541e-08
NC_013162.1|WP_002675822.1|1176496_1177471_+|M23-family-metallopeptidase	gnl|CDD|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	3.98562e-49
NC_013162.1|WP_015782213.1|1170526_1170850_-|type-II-toxin-antitoxin-system-YafQ-family-toxin	gnl|CDD|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	7.06959e-32
NC_013162.1|WP_015782217.1|1173016_1173535_+|J-domain-containing-protein	gnl|CDD|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	2.80096e-28
NC_013162.1|WP_002674635.1|1165813_1166011_+|50S-ribosomal-protein-L35	gnl|CDD|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	8.3253e-18
NC_013162.1|WP_009421835.1|1175081_1175942_+|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|180446	PRK06180, PRK06180, short chain dehydrogenase; Provisional.	2.90154e-97
NC_013162.1|WP_015782212.1|1166561_1170500_-|DUF4011-domain-containing-protein	gnl|CDD|224037	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair].	4.52968e-26

Protein sequences

>NC_013162.1|WP_015782215.1|1171162_1171885_-|methyltransferase
MMFKFKQFNVKQAQSAMKIGTDGVLLGAWTPIENPKSILDIGAGTGLLSLMLAQRSDAPVIDAVEIDEKAYIECTENFEESQWGDRLFCYHASFQEFALEIDEVYDLIISNPPFYTADYKTAEKARNTARFTDTLSFSELLEGVSQLLTDEGVFSVILPYSETEGFIALASGYGLFPQKITHTRGNATAELKRSMLLLSRKELSSYPIDVLIIEKERGVYTEAYKSLTKDFYLNLGNEVG
>NC_013162.1|WP_015782214.1|1170842_1171100_-|flagellar-motor-switch-protein-FliM
MRTVKYNEMVNYNVSIPKENAPMFESLFKKYNVIAEPTVVAEPVEEYIPNEETIRAIEEGRREYREGLLKGYKNLDELFSDLDNE
>NC_013162.1|WP_015782213.1|1170526_1170850_-|type-II-toxin-antitoxin-system-YafQ-family-toxin
MNNTEQEEIPKYSIFITTTYKKEYKKFSNQEAKKKAIKEIIKILMYKGTEGIPKKNLPHLLTGNYKGCWECHIESDLLLIWEQNDENMAIILERIGSHSELFYKNKK
>NC_013162.1|WP_015782212.1|1166561_1170500_-|DUF4011-domain-containing-protein
MNQEVFTALQNKLKVGNRRGVHLNALPGASRYKFDIARLSAIFKSLPERFILDLLTLRNLNFSFSIHDTESTNIDHRGAGSRTPEEGQAVKVNEKEEGKSVKEKGTREVALEKLVDSIENLMFQSEVITSEKGVNTLGFGFPILLRRDMGDGQLTAAPILIWSVKIKPATQMNTWVISRSEEDPIYLNEVLTNHLQNDSGVSLKPIPDEMLEDGKIDKPELHSLCSDILNQLKVTQNLDFLLNNYTEILPLKTKAAYEELLSNKGDAFIEKSGILSLFEVQKQNIINDYESLKKEFIPLQATANEQFQSLSAIETDPSQQSILESLKSQQKILIQGPPGTGKSQTLTAILINALENKQKTLVVCEKQTALEVLYNALQNKGLGRYCTMIKDAIADRRFIVDAVRNHIDNAEFKKETPAFLENLLTEQVQAMRKITTDINAIHHKLNQPLLNQLSWTDVMAELMHYETDREELNLSAFSFQFTDEEFASLAPLWQQGEALYQRYAPYAQNHLFNPKKLTATNLFNTQQQLAEAFKQYAQQWEVIQQQIAVYKAYYLHKRKEEFIQQLDTLAQYRNEYELITATLPPTSPVYQPEVTKGFFYKLSALFSAEKKQVLKTQKRLQELCTAIKALSLHRNFLSIAISDNLLLNKTVIAEYTPAITQAQTDFDSKVNADFVALDLLNYYERSFVNADLDKLISEVKSLKNRIEADNWLDTLNFGNTFAEFEAFITRSLATYNNYQADPAQPLVAQYEWFAFFQSLNDFQERIVLSLTKVTHWEASFLYAYYTLLLQRNADDTLNFNERDYADFKKKIHYFASAQKDFIEGYWNTQQRKAVKTFEETNKELTVANLYNKRKSEKHNRLTLRQIAMKDTDLFTSFFPIILTTPDACCNLFEGKNFYFDNVVFDEASQLKLEDNLPAMLKGKTIIIAGDEHQMPPSNYFSKVFDGTAEDDDDNEEEDEVLTYKNAMLNIESLLDYALEYHFSKNHLDFHYRSKHPYLIDFSNHAFYNARLRPLPSTESRIPIHFTQVNGTFDEHINREEAAEVLRILSQIEPRPDGTYPSVGIATFNITQRNYIRKQILQKQNDPTQTAFREKINALEQAGLFIKNLENIQGDERDIIILSVTYGKKKGGKFVQSFGPLNFTKGYKLLNVIITRAKEQIYVCNSIPEELLATYKEALAQEGANNRRAVLYAYLAYARAVSNGNDALRREILSELDLYGHKHTDIDQQSKSAFKEQTYRQLKEKYPDQRITMDYEFGGYTIDILLEPKEGKPVAVECLSKPLYNNDLAYLEDLHKEKILLNAGFDYKRKWAK
>NC_013162.1|WP_002674637.1|1166111_1166456_+|50S-ribosomal-protein-L20
MPRSVNAVARRARRKKIMKQAKGFFGRRKNVWTVAKNAVEKAMQYAYRDRRNKKRTFRALWIVRINAGARLHGLSYSQFMGKLKAADIQLNRKVLADLAMNHPEAFKAIVEKVK
>NC_013162.1|WP_002674635.1|1165813_1166011_+|50S-ribosomal-protein-L35
MPKIKTKSGAKKRFKLTGSGKIKRKHAFKSHILTKKAKKRKLALTHATLVHSNDEASVKKQLGLK
>NC_013162.1|WP_106096058.1|1165208_1165706_+|translation-initiation-factor-IF-3
MNRDIRVPEVRLVGENVEGGVYPTRKALEIANELELDLVEISPNATPPVCKVIDYKKFLYEQKKREKEMKAKATKVVIKEIRFGPQTDDHDYEFKKKHGEKFLKEGSKVKAYVFFKGRSIIYKDQGEILLLRLATDLEDYGKVEQMPKLEGKRMTMFLAPLPKKK
>NC_013162.1|WP_015782211.1|1163173_1165117_+|threonine--tRNA-ligase
MIKITLPDGSVKEYQSGITPAEIAASISEGLARNVLSASFNGKTIETVTPLTTDGSLTLYTWDSPEGKKAFWHSSAHILAQALEELYPGIKLTIGPAIANGFYYDVDFNGKPISEKDFPAIEAKFLEIARGKHPFKMRPVSKAEALSYYAGKNEYKTELIEALEDGTITFCDHSTFTDLCRGGHIPNTGFVKAVKVLSAAGAYWRGDEHNPQLTRVYAISFPKQKELTEYLELLEEAKKRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIGHKNLYVTSGHWDKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPKRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDDEFKHVIDLVLYVFGSLGFDNFTAQVSLRDPENPTKYIGSDENWAKAENAIINAAKEKGLSYVIETGEAAFYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFVAILLEHTAGNFPLWLNPSQAIVLSLSEKYENYAQKVLRLLENSDIRTLIDNRAETMGKKIREAETQKIPYMLIVGENEEKEGTVSVRKRGGEDLGSMSVEAFAKLINDEVAKSIKQFAN
>NC_013162.1|WP_015782210.1|1160554_1161832_-|sodium:proton-antiporter
MQKTTIISIIPLLVFVALFLGSGLYFDNFYSLPAPIIALFSVVVALLIYRAPMKEKIGLFFKGAGDSNVLQMCMIALLAGAFASVANALGSTHSIVNMGMYYISPEYFPVGIFIIASFLSFATGTSVGTIMTLSPIVFDLATQSQSNTALIGASLLSGAMFGDNLSLISDTTIAATQSVGCQMNEKMKANAKIAIPMAILTVIILLLIGNPDAENHLHNQLYSDFNAVLILPYVAVVVIALFGVNVFVSLFLGILISGMIGFAYGKFHFLQFATDIHKGFMGMADTFFLYFIIGGLAFLVEHFGGIRFLMNLITQRIKSGSSALLGMGFLVTVADVCVANNTVAILIASKTSKTIAEQFKIPLRSVASVLDIFSCYAQGLIPYGAQVIALYKFADTIDYPQLVMYAIYLHLLLIGTLGYIYVGKK
>NC_013162.1|WP_015782209.1|1158363_1160328_-|alpha-amylase-C-terminal-domain-containing-protein
MNDPLLLPYLPVIQGRHQHFIDVLHRVQGDAKCLADACNSHLYYGLHRTHTEWVLREWAPNATAIFLLCDSNDWQKNKHYSFTKLNDQDWELRVPANILRHEMLYKLLVEWEGGSGERLPSHTTRAVQDDYTKVFSAQVWCPEHPYPWQHPRPKATPHPLIYEAHIGMSTEHQRVSTFIEFRLYVLPRIAALGYNTIQLMAIQEHPYYGSFGYQVANFFAVSSRFGTPEELKELIDAAHGLGIRVLLDIVHSHSVSNEAEGLSHFDGTDYLYFHRGERGKHPAWDSRCFDYGKPQVLNFLLSNCKYWLEEYRFDGFRFDGVTSMIYYDHGLGKAFTDYSFYYDGNEDDDALVYLTMANQLIHELYPEALTIAEEMSGLPGLASPIAEKGIGFDYKLSMGIPDYWIKLLKEVPDEQWHVGNIYYELTNKRAEERTISYAESHDQALVGDKTIFFWLTDKEVYTGMSVFDHSLIIDRAMALHKMIRLVTLGTAGGGYLNFMGNEWGHPEWIDFPRQGNNWSYAHARRLWSLVDDSNLKFKYLNAFDSAMIHFATDSKFLDREPHILVRDIERQLLIFERSGYLFVFSFNPTTSYTDYQFDVPAGKYTTILNTDNPAFGGDNRIDESVEHFTQYTGKENLLSLYIPARIGIVLKIDN
>NC_013162.1|WP_015782216.1|1172609_1173017_+|hypothetical-protein
MIYYSILAISVAYLIYILVMQATTNLKREKSIEEKRQKWQNALVDEEDTKDRIMELIKSEYGEPTTSSVEKGVYTEGMPDFLVKMALGKPLEVQSAGFKGSTTERWHYKTLTLTFQNNKLIGWESHDNTSQKPRL
>NC_013162.1|WP_015782217.1|1173016_1173535_+|J-domain-containing-protein
MLKDYYEILGVSQKASDDQIRDAYKKLAKAYHPDKHQGDDFFAEKFKSLQEAYAVLSDPESRKDYDTDLAAELKGQKKTEEPKKQAKKKPSQKNSNSTSSKARTVKDLPSLIDIYFEQKIATVKTRKEYDTILASPQKKYSSWVKIVLVVLVIILSTILLNPSFGLLKELLP
>NC_013162.1|WP_049756971.1|1173735_1174656_+|acyltransferase
MDTFRYQYENNEVYHRFCTLLNCLPNEVNTLEKIPFLPIECFKTEKVYCGHTTPQQIFTSSGTTGAQTSRHYVKELSLYEQSFRKGFEHFYGNVEDYVVLALLPSYLERTGSSLITMVADLIERSGSEYSGFYLNEYDLLAERLQTLDASGKKVLLIGVSFALLDLITEHTFSLKNTIVMETGGMKGRRKELVREELHALLCKGFGVEMIHSEYGMTELLSQAYSAGKGIYKCVPWLKVLIRDTNDALSYLPTGKTGGLNIIDLANRESCSFIATQDLGKLHPDGTFEVLGRFDNADIRGCNLLIS
>NC_013162.1|WP_009417378.1|1174778_1174979_-|twin-arginine-translocase-TatA/TatE-family-subunit
MVLILFGADKLPSIARGLGKAMRQLRDATDEIKTEIQRGAEKAGVDTKIVEETQKEIEKMKKTIDN
>NC_013162.1|WP_009421835.1|1175081_1175942_+|SDR-family-NAD(P)-dependent-oxidoreductase
MKKVYFITGASSGLGKAIALQTLKEGNVAVLAVRNPEKVTDLVNTFRENTLVVSLEITNEKERQEAIQTAIAKFSRIDVLVNCAGRGDLGALEEFSSQQIRAQMEINFFATIELTRLVLPIMRRQKSGNIVNVSSIGGRVNIGGFSLYGAAKYALEGFSEALYHEVKPLGIRVTIVEPGALRTHFAGAGNLRPENHIVDYDDTIVPLRNYLYGSDGKQQGDPEKAAKVIIKAINDKEPPLRLVLGKDAYDLLEAKRTEEKEELNKWRPLGEAIAFDDAEFVAIGKN
>NC_013162.1|WP_015782219.1|1176132_1176366_-|twin-arginine-translocase-TatA/TatE-family-subunit
MGFSEIIFILFMVLILFGADKLPSIARGLGKAMRQLRDATDEIKTEIQRGAEKAGVDTKIVEETQKEIEKMKEDFKG
>NC_013162.1|WP_002675822.1|1176496_1177471_+|M23-family-metallopeptidase
MKKVKYYYDPDTLSYKRILSRKRTKVRNALIFLTAAALFGILFSFIMINSRLFFTPREVVLAREIKTYETNYQILNKKMELAEDVLADLEERDNNMYRLYFNAPIIPDSVRKSLKDPNRYKNLEKYGNSKLVANTNKRLDILRKQLVVQSKSLDEIAKLSKAKEKFLSSIPAIQPINNKDLKHMASGYGWRIDPFTKARKFHYGMDFTAPQGTPVYAAGDGVVARADSNASGYGNHIRIDHGYGYVTLYGHLSAYNVRAGQHVKRGDLIGRVGSTGRSEAPHLHYEVIKNGEHINPIHFYYGNLTPSEYTEMLHVSTQENQSLD
>NC_013162.1|WP_015782220.1|1177507_1178287_+|DUF695-domain-containing-protein
MTHHNLPQNWDFFMCHIEGVPASIRTNLALFELAPLEGLSQRLQFYIKMKNPTPDGFPSKEEYPILCDIEDAISEKAEATGAVLAGVVKSEGFLELWFYCNNAEVLAQTCEEALQAFEGYKSGYNTAEDAQWEDYFDFLYPDEFSYQTMQNRKVLMQLEKKGDKMEVPREIDHFIYFKSEAQQQGFAEKVAEKGYKVRLSDEKTVEERKSEGHTFPYTVEATREDSPLDINNIVWELIELASSFEGEYDGWGCVNVTDN
>NC_013162.1|WP_009411004.1|1178302_1178635_+|MerR-family-transcriptional-regulator
MDIVLPDKLYYTIGEIAKAFNVNASLIRFWEKEFSIISPRKTSSGSRKFSPDDVKKLQLIYHLVKEQGYTLEGARQRLKEDKQKPLTNLDVVTKLERVKQMLIDIKENLE
>NC_013162.1|WP_041546709.1|1178965_1181032_-|beta-galactosidase
MDKDFITLPLHHKMYHQKSICMFLRSYIWLLLLGIASITTTVKAQPYISPIGAQVFIEPGQTDEEINTWFKLLSEHQMNCCRIRMFENYMKRPDGTWDFSLFDKAFKAAERYNVKIVGTLFPAAPDNSLGGFKHPYSQSHLQEIATYIKQVVTHFKTSPALYGWVLMNEPGTGGWVPNDAFGNAQKSEWLKTLKPTAYNSKGYPQIVDFTPQQFLLHYNTWYLQWIANEVKKYDPNAYLHVNSHQIFSNIAEYNFPAWRNFLSSLGASAHPSWHYTMLHRNQYATALGANCAIIRSGAGELPFWVTELQGGNNTFSGYKAFCPTKEEITQWLWTSVGNGAEHILFWCLNPRAVGDEAGEWALVDFQNQPTDRLTAASEVAKTLRKINISKFKPVVANIHILYTRETLWIEKKAQLNDNTNNDYEGRNTGGAMKSAFAMYETLLENGINSQFQCFDEFNWNKPSYKGETIILSGQISLPSRYWEPLRNFVHNGGKLVMEGLSAFYDENMFALHHTGFPLQDVLGGALKEVKCLPTDFSVNYQNAPLPAHLWKGSIYNTQGQIVTQEGNSVLATRHRFMRGETFWFPSLLGLGALRSGKGEALSRLLLAEAQATVPFQFETYQKGVQMYTMQKGNQYLTILINKRPQATSVALRYPKGVNPSVVFADKGGSATANTARLSSEETLVILWK

Crispr_ID: NC_013162_9

• CRISPR_ID: NC_013162_9
• CRISPR_location: 1553246-1553342
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013162_9

Consensus_repeat	Method
ATTAGAAAATTTGGAGATTAGTG	CRISPRCasFinder

spacers of NC_013162_9

>9.1|1553269|51|NC_013162|CRISPRCasFinder
GATTAGTGAATTTGTTGGAGGAGTTTAGAGGGAATGTGCTGCAAAAATAGG

CRISPR arrays and Neighbor proteins around NC_013162_9

CRISPR arrays

The CRISPR arrays of NC_013162_9

>merge|NC_013162|9|1553246-1553342|CRISPRCasFinder
ATTAGCAAATTAGAAAATTTGGAGATTAGTGAATTTGTTGGAGGAGTTTAGAGGGAATGTGCTGCAAAAATAGGATTAGAAAATTTGGAGATTAGTT

>NC_013162|9|8|1553246-1553342|CRISPRCasFinder
ATTAGCAAATTAGAAAATTTGGA	GATTAGTGAATTTGTTGGAGGAGTTTAGAGGGAATGTGCTGCAAAAATAGG
ATTAGAAAATTTGGAGATTAGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_015782474.1|1541367_1542810_+|arylsulfatase	unknown	unknown	gnl|CDD|293764
NC_013162.1|WP_015782487.1|1578873_1580547_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl|CDD|185760
NC_013162.1|WP_041546757.1|1553941_1566112_+|T9SS-type-B-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275004
NC_013162.1|WP_015782484.1|1570215_1572972_-|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl|CDD|234734
NC_013162.1|WP_015782475.1|1542922_1544206_-|MFS-transporter	unknown	unknown	gnl|CDD|341039
NC_013162.1|WP_002675350.1|1575395_1575521_+|FeoB-associated-Cys-rich-membrane-protein	unknown	unknown	gnl|CDD|378933
NC_013162.1|WP_015782481.1|1551315_1552650_-|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	unknown	unknown	gnl|CDD|223842
NC_013162.1|WP_015782483.1|1566955_1568476_+|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|372554
NC_013162.1|WP_009419174.1|1572976_1573981_-|virulence-RhuM-family-protein	unknown	unknown	gnl|CDD|379118
NC_013162.1|WP_015782480.1|1549023_1550055_-|ferrochelatase	unknown	unknown	gnl|CDD|234585
NC_013162.1|WP_015782488.1|1580565_1582065_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_009422601.1|1569434_1570160_+|iron-sulfur-cluster-repair-di-iron-protein	unknown	unknown	gnl|CDD|274701
NC_013162.1|WP_009421080.1|1550080_1551313_-|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl|CDD|274232
NC_013162.1|WP_143713221.1|1552646_1552859_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782486.1|1575816_1578861_+|TonB-dependent-receptor	unknown	unknown	gnl|CDD|274948
NC_013162.1|WP_015782477.1|1544946_1545966_-|DUF3078-domain-containing-protein	unknown	unknown	gnl|CDD|378621
NC_013162.1|WP_015782478.1|1546507_1548217_-|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl|CDD|235470
NC_013162.1|WP_015782476.1|1544349_1544943_-|thymidine-kinase	unknown	unknown	gnl|CDD|235272
NC_013162.1|WP_015782485.1|1574703_1575387_+|SIMPL-domain-containing-protein	unknown	unknown	gnl|CDD|377344
NC_013162.1|WP_015782479.1|1548392_1548938_-|CopD-family-protein	unknown	unknown	gnl|CDD|367596

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_015782474.1|1541367_1542810_+|arylsulfatase	gnl|CDD|293764	cd16145, ARS_like, uncharacterized arylsulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	0
NC_013162.1|WP_015782487.1|1578873_1580547_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl|CDD|185760	cd08977, SusD, starch binding outer membrane protein SusD. SusD-like proteins from Bacteroidetes, members of the human distal gut microbiota, are part of the starch utilization system (Sus). Sus is one of the large clusters of glycosyl hydrolases, called polysaccharide utilization loci (PULs), which play an important role in polysaccharide recognition and uptake, and it is needed for growth on amylose, amylopectin, pullulan, and maltooligosaccharides. SusD, together with SusC, a predicted beta-barrel porin, forms the minimum outer-membrane starch-binding complex. The adult human distal gut microbiota is essential for digestion of a large variety of dietary polysaccharides, for which humans lack the necessary glycosyl hydrolases.	7.8022e-24
NC_013162.1|WP_041546757.1|1553941_1566112_+|T9SS-type-B-sorting-domain-containing-protein	gnl|CDD|275004	TIGR04131, conserved_hypothetical_protein, gliding motility-associated C-terminal domain. This model describes a protein homology domain unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Flavobacterium johnsoniae, that exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss a this motility. Proteins with this domain frequently pair with members of family TIGR03519, whether one such pair or many occur in a genome. More than 30 members may occur in one genome.	2.93363e-29
NC_013162.1|WP_015782484.1|1570215_1572972_-|excinuclease-ABC-subunit-UvrA	gnl|CDD|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NC_013162.1|WP_015782475.1|1542922_1544206_-|MFS-transporter	gnl|CDD|341039	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily. AmpG acts as an inner membrane permease in the beta-lactamase induction system and in peptidoglycan recycling. It transports meuropeptide from the periplasm into the cytosol in gram-negative bacteria, which is essential for the induction of the ampC encoding beta-lactamase. The AmpG family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.07818e-75
NC_013162.1|WP_015782481.1|1551315_1552650_-|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	gnl|CDD|223842	COG0771, MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane].	3.27655e-157
NC_013162.1|WP_015782483.1|1566955_1568476_+|leucine-rich-repeat-domain-containing-protein	gnl|CDD|372554	pfam13306, LRR_5, Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.	1.06705e-15
NC_013162.1|WP_009419174.1|1572976_1573981_-|virulence-RhuM-family-protein	gnl|CDD|379118	pfam13310, Virulence_RhuM, Virulence protein RhuM family. There are currently no experimental data for members of this group or their homologs. However, these proteins are implicated in virulence/pathogenicity because RhuM is encoded in the SPI-3 pathogenicity island in Salmonella typhimurium.	1.05646e-152
NC_013162.1|WP_015782480.1|1549023_1550055_-|ferrochelatase	gnl|CDD|234585	PRK00035, hemH, ferrochelatase; Reviewed.	3.18626e-122
NC_013162.1|WP_009422601.1|1569434_1570160_+|iron-sulfur-cluster-repair-di-iron-protein	gnl|CDD|274701	TIGR03652, FeS_repair_RIC, iron-sulfur cluster repair di-iron protein. Members of this protein family, designated variously as YftE, NorA, DrnN, and NipC, are di-iron proteins involved in the repair of iron-sulfur clusters. Previously assigned names reflect pleiotropic effects of damage from NO or other oxidative stress when this protein is mutated. The suggested name now is RIC, for Repair of Iron Centers. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	3.41423e-88
NC_013162.1|WP_009421080.1|1550080_1551313_-|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl|CDD|274232	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW. This family consists of FtsW, an integral membrane protein with ten transmembrane segments. In general, it is one of two paralogs involved in peptidoglycan biosynthesis, the other being RodA, and is essential for cell division. All members of the seed alignment for this model are encoded in operons for the biosynthesis of UDP-N-acetylmuramoyl-pentapeptide, a precursor of murein (peptidoglycan). The FtsW designation is not used in endospore-forming bacterial (e.g. Bacillus subtilis), where the member of this family is designated SpoVE and three or more RodA/FtsW/SpoVE family paralogs are present. SpoVE acts in spore cortex formation and is dispensible for growth. Biological rolls for FtsW in cell division include recruitment of penicillin-binding protein 3 to the division site. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	5.91953e-82
NC_013162.1|WP_015782476.1|1544349_1544943_-|thymidine-kinase	gnl|CDD|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.53552e-88
NC_013162.1|WP_015782486.1|1575816_1578861_+|TonB-dependent-receptor	gnl|CDD|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NC_013162.1|WP_002675350.1|1575395_1575521_+|FeoB-associated-Cys-rich-membrane-protein	gnl|CDD|378933	pfam12725, DUF3810, Protein of unknown function (DUF3810). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 333 and 377 amino acids in length. There is a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterized family of peptidase enzymes.	0.00839442
NC_013162.1|WP_015782478.1|1546507_1548217_-|1-deoxy-D-xylulose-5-phosphate-synthase	gnl|CDD|235470	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NC_013162.1|WP_015782477.1|1544946_1545966_-|DUF3078-domain-containing-protein	gnl|CDD|378621	pfam11276, DUF3078, Protein of unknown function (DUF3078). This bacterial family of proteins has no known function.	1.09328e-23
NC_013162.1|WP_015782485.1|1574703_1575387_+|SIMPL-domain-containing-protein	gnl|CDD|377344	pfam04402, SIMPL, Protein of unknown function (DUF541). Members of this family have so far been found in bacteria and mouse SwissProt or TrEMBL entries. However possible family members have also been identified in translated rat (Genbank:AW144450) and human (Genbank:AI478629) ESTs. A mouse family member has been named SIMPL (signalling molecule that associates with mouse pelle-like kinase). SIMPL appears to facilitate and/or regulate complex formation between IRAK/mPLK (IL-1 receptor-associated kinase) and IKK (inhibitor of kappa-B kinase) containing complexes, and thus regulate NF-kappa-B activity. Separate experiments demonstrate that a mouse family member (named LaXp180) binds the Listeria monocytogenes surface protein ActA, which is a virulence factor that induces actin polymerization. It may also bind stathmin, a protein involved in signal transduction and in the regulation of microtubule dynamics. In bacteria its function is unknown, but it is thought to be located in the periplasm or outer membrane.	1.52517e-29
NC_013162.1|WP_015782479.1|1548392_1548938_-|CopD-family-protein	gnl|CDD|367596	pfam03653, UPF0093, Uncharacterized protein family (UPF0093).	8.38415e-39

Protein sequences

>NC_013162.1|WP_143713221.1|1552646_1552859_-|hypothetical-protein
MAKLIISIIGISGIIGISGIIGISGIIGIIGISGIVGIIYFFSLSPLLIPICFVPLPKNNKHLNKTRFYQ
>NC_013162.1|WP_015782481.1|1551315_1552650_-|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase
MKRLVILGGGESGVGTAILGKQKGWEVFLSDKGSLKPHYRETLNKEGIQWEEGTHTEEKILSADVIMKSPGIPDKAPIIKKAHEKGIAVISEIEFASQYTDSLIVGITGSNGKTTTTLLTYHIFKEAGLQVGLGGNIGYSFAELVATKNPPYYVLEISSFQLDGIEHFAPHIAVLLNITPDHLDRYDYKFENYIDSKFRIAMNQTENDYLIYDADDEVITQWLSTHTIKSKLIPFSIEKELPQGAFLKDNKIYIMLENQTTEIDVEEISLRGKHNIKNTMAASVAARLVNIRNNSLRESLKGFKGAPHRLEEVKVVDGVTYVNDSKATNVNSVFYALDTIKTPIVWIVGGQDKGNDYNSLLPYVHEKVRAIVCLGVDNTPIIQSFYNTIDTLVETRSMDEAVKLAQSFAQEGDTVLLSPACASFDLFKNYEERGDLFKAAVQKL
>NC_013162.1|WP_009421080.1|1550080_1551313_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MREWIASHIKGDKTLWALILVFTLFSFLAVYSTSTNLVYVVGKGTPFGYLIKHLVFVGVGYLTLYIVHRTPYRFFRPASKLGLILAVLLLIFANLSGSTIEGANASRWLSVGGFSFQPSTFAMVMLMAYVASYLAKNYGKKLSFKETILPLWMPVGVIAALVLLSNLSTAMLILSSVLMLTFLGRFPMKHIFSAIGIAIVFLALFLLVVKAFPEAFPNRVDTWMSRIESFMGGEDNKEGYQIERSKMAIAKGGIMGQGAGKSTMKNFLPQSSSDFIYAIITEEYGSLGAIVIMVLYILLLIRIVVISQKAPTLYGQLLVLGLGFPILLQAIINMGVAVELFPVTGQNLPLISSGGTSLWMTCLALGCILSVSAQKRKDGKMEKDKPEADVEEELAESALRQMKNANRTGD
>NC_013162.1|WP_015782480.1|1549023_1550055_-|ferrochelatase
MPKGVLLVNLGSPDSFAIKDVKRYLKEFLMDERVIDLPYLLRYALVHGVILNTRPPKTSKAYQKIWWSEGSPLIVISRWLTEKVQRKVSVPVVLAMRYGNPNIANALKELHSKGVDEVLLIPLYPQYAMATTETIEVLTEKLIKASYPNMRLTKFPAFFHRPEYIEALAQVVRAHLGTAPFDHLLFSYHGVPERHLYKTTPTSAHKHIVEGVTCCDPYSEEGTHCYRSHCFETTRLLAEKLGLEKGKYSQAFQSRLGKDKWITPFTSDKIIELARNGVKKLAVIAPAFVADCVETLEEIEIVGGKSFRKNGGENFKMIPCLNDSDLWVQALSSWINEETRDER
>NC_013162.1|WP_015782479.1|1548392_1548938_-|CopD-family-protein
MTDYLIAKSIHIIFVVSYFAGLFYMVRLFIYHTEALEKDDPERSILHKQFSFMEERLWNIITVPALVLMTLSGLYMLYDDGEWTLIKQGWFHVKLLFIAFLFVYHYYSWRIMKRLQAGRASLTSVQLRMLNEIATIILFVVVFAVILKGLFITYWYFSLIAFVVMGALIMLVVKLVNKGKN
>NC_013162.1|WP_015782478.1|1546507_1548217_-|1-deoxy-D-xylulose-5-phosphate-synthase
MQQLKNTLITSLPALAQQIRNRIIEVIATRGGHLGASLGVVELTIALHYVFDTPQDILVWDVGHQSYAHKILTGRNEDFTHIRERGGISGFPKRAESQYDAFGTGHSSTSLSAVLGMAMASALTGDKKRQHIAVIGDASIVSGMAFEALNYAGTTDANMLIILNDNAMAIDPTVGAFSHYLAQLKTEHATHSAFFSALGITYKGVVDGHNLPALITALKAEKQARGVRLLHVVTTKGKGYPKAEASQVFFHSPSQFDKITGNPLPENSALPAKYQDVVGQTLTELAQQNPKIVVITPAMSSGSGLTTMQKAFPDRVMDVGIAEQHAVTFAAGWATQGFIPYCVVYSTFLQRAYDQLIHDVALQNLPVVFCIDRAGLVGEDGATHHGVFDMAFLRPIPNLIIASPRNATELRNLLYTAQQSLEHPIVIRYPRGRCTQTDWQQPFQQLIIGKGEQLKEGSEIAVLTIGAIAENVQQQLTQTAEPEKYAHYDARFLKPLDEATLHHIFRSYKKVITVEEGSTGGLGSAVAEFATQHGYTIPLKIITLPDSFIPHGKVETLKEEFLKIRDLAD
>NC_013162.1|WP_015782477.1|1544946_1545966_-|DUF3078-domain-containing-protein
MKKLIVLLFLTSFTAFGQVRKARTYEAPVKSDTVKVMKDTEALKFTFNRFKLAQQKWFKFNQVSLNMSEVAFSNWSAGGESSISGIFNAKFRRRYTERTFFWDNELEINYGINAQKGREVRKTDDKLSLISSFGYRGDSQSFWYYTARYQFLSQISNGYNYPDVEKPISKFFAPAYITFGLGTEYAPSKIKFSIFLSPITLKTTAVLDQRLADEGAFGVERAQRAPDGTILKKGKRTHNELGFSVSGRWDKKVMENMILNTSFNFYGDYLKNFGNIDVDWETNLNLKVNSYVQARIGVHIKYDDDVKFYSYKAPNGEVYNYGARTQFKQVLGVGVLYTF
>NC_013162.1|WP_015782476.1|1544349_1544943_-|thymidine-kinase
MFLENTVNNNEKTGWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEAAASIMLLADGCDVVGIDEAQFFDDEIVHVCNELANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTRTGNLANYSFRKVSNDQQRLLGEADSYEPLSRAAFYKAMNAKKTKE
>NC_013162.1|WP_015782475.1|1542922_1544206_-|MFS-transporter
MKKKNPITWVPTTYFAMGLPFVMLSLVFPIIFKGLGIPDDQNAFWTSLLILPWSLKPIISVIMELYGTKKQYIVITELVSAALFGCIVFSLPLPNFFTVCLALLGVIALSGSTHDIAGDGMYMEQLDTATQSVYSGWQGAFYNLAKVLANGGLIFLAGWLVKAKGMSVIASWQLILSICATILGLVGLYHLYALPKDTKPQQAGDFNVKMKELWGIFVAFFRKKYIFYYLFFIFLYRFAEGLAMKIAPLFLIAKTDKGGLGLIEQEYGLVYGTAGVIAFIVGSISAGYFVSRVGLRKALFTLACAFNIPFVVYLLFAYFLPSHLPTIALGIVGEYFGYGFGFVGLTLFMMQQIAPGKYQMAHYAFANSLMNLGVMVPGMISGFLSKYLGYQHFFLLVMICTIPALLITWKVPFTYDSKQNKIDEKAH
>NC_013162.1|WP_015782474.1|1541367_1542810_+|arylsulfatase
MKYLLFSLLASLCTIGVKAQEKLPNVIFILADDLGYGDIEPYGQQIIKTPQLSKLADEGMKFTQFYTGTSVCAPSRASFITGQTTGETHIRGNEEVREPVDGQAPLLANDPSVAQLFKKAGYNTGCFGKWGLGIVPSEGNPLKQGFDTFFGYNSQFRAHRRYPAFLWHDNEKVLIPENGNYERQEVYGEDLIQEKILDYIGKQTAEKPFFMWLTYTLPHAELVVPHDSIYASYEYLPKKPYKGVDYDKITPKPFGWAGYMSQPHTYATYAAMVSRLDKYLGEIRKLLKVKGLDEDTIIIFASDNGAHREGGADPKFFNSSAGLRGIKRDLYEGGIRTPYIVYWKGKIKAGSVSDHIGAFWDMMPTFAEITHQKYVPNRHQVSFLPTLLGKKQQQQHKYLYWEFHEMGGRQAVRYKNWKGVRLNVNKDKKAPIELYDLTTDPAEQHNLAEKYPKIVKKIERFMEQSHTRSELFPFDWEAKK
>NC_013162.1|WP_041546757.1|1553941_1566112_+|T9SS-type-B-sorting-domain-containing-protein
MRKFFLTIVFIVMTVFGLSAQTPLNLNNFNVSTTPGQCASDGKIKVTLPTTMGPVGTKLQVKLDVPGDPSGRTWPMEIGVTGKNEHEFTTLKAGTYTVTMVNVANNQKSTLPKVVTVTSSYVPPTFKSFKSVPPSCTGNGNDGSVVFSIQKGAKGPFKVRLTKGGTELYNATHNAVAGQDLEITIQGTNAKPITTGSGYELTVEDTMNGTPNCGETNKTTFSVAASSLNIDCMEFELDNENSGIRVGADCKFNFSFRIKRKDNVGIQQSLENEIKGKPGTAVIKRYDSAGHYINSYDITSSYQTSARPQKSSAYSFITNNTVQFQEGDIIELTINLGKTPIVKKFKLDKDLVDVLRNKLNPTNSQDPFIYMDRAGSTAIAAVNRSDLNADPANPCPSGSSAKYLYVEANWKKIELPNPDSASDKMYFGFYNWQNFTPADWVKNPSAAGAKGFYFEIYKYIGAGDPSWNATYTQSEISDSTKWQLLIPGTDYTWINNNGSLYADLASQANGYYKVKFKTKGAGITQCYEPERIVNMTPLPNKIDERFDGIEINRGIFKGTVSIRKWVAGNQFNYPITVTVDYLDDGHSGTTRTFDFQTALPFEPLHKVTYTFPMVREVRNPDTANETYRFEFGDLPQGRYNITIKDRCGNEATKEFNLNTPMQYDKDEVKVEQGCVGAAKVSYEIGTTPVGTLRYAQYTLLKKTATGYDQVVGRSNDHSHTFNNLSAGEYLLQSTYFYYARIKQLWDVGKPSQREQYFTDPANSMNLYSVIPSPDTHKPSDPVNDGTGAFHVSRVYLTVSPTGELKRDVVGTSCSAASGTGLIAVNVTNPEYIRYPLQFSIKNTVTGVEIKSPVFGATSTATGYVFKNVPDGTYAVTTSHACGDYPDSALVTANNYTSPGVTYVARSTNPCNGDVVDLTFGGSAQLFNIDWFRIEANATETFLGSEQTISDTVTRNTQYVVRYSLKDLGLCTTNSGSHTITVNFAPDAIPPVITGCPSQNIEVTAVANQCYGIAHWGVVTATDNCRIGSWSQTHQSGERFPIGTTSVTYVFKDTSGNAATCTFNVVVKSRAVDMEVTNDFVDGTGAPINRDLSLTENFNYRITYRNKGTAGVVSSTLEVTLPNHPNITIGTPDVTGATLTIYKPTFTKSGNVITFTLPKQTLTAGGNVRTILIPLTLKGECSVIGKPCMNVLQATYSLTYSGGTAACTIPEQTSTGSKTIAISTQECSRTEIACAGTNTRLTAIEGFVSYNWYKNGVQQPNPLNHNYIEVSDPATYRVEKIAVCGNVTYTTTEEIKLTLSNDLPDPIKPQANGGDVCAGNNLWVSHFILCNQPSRNIVVNFRDSNIMWQKLKAGSSPSSLNCPNLDDSAWEDVHSNNTFVANAQGHFRLRVSDKGNNCEKYFYFDVFTNSLSGEIIDFANVTSYQQGFITIRMATAGLAYKYVLKNSAGNVVNQNGQAFVITTNSEYRVPITIAPDTYTVEVTSTALPSTCKATFIQKIEKQTTLTAKVTPKAWKNCNSLTTRFEADGGKNPYQFAIWSIDGVVQNGYTDYSDVPTSAFIATIPAGSSFVERDIHIDQPGRYVFIAKDANSAYALTAPVDIYPEGLLGYTIKTRDILCGFANNSGQVSITYNTQQNVKSTLYKLDDTGARVQNMGTNSTGFFNNLEAGKYEVEIQIQLSTTNICTYRNRNIVINDVESTLRAYAGVAEDISCDTSSPTKEYIVHINNVSGGTGTGYEFSTNNVSFTTVPILRVGSTASVVYVRDSNKCTLEIPITIKPIVPATVSASTVTYDCEGKGTFTVTTNPAGNYEYDIVKDDGTLSETRTSNVFTLDPGIYSVYVRYTPKTATGTTPNVLFKEDFGKGKNTCDSESVFITCNANGTTLGDNQYMITRQVPTTGTYWVSTPPSDASGVTDGRYLAINGSSPDNDNGIVYKRTIRDVVAGQEMSVSVNLFNLLPVTYIGGTNPNLVVRLYNPGNPAQYVERSLGELPRTGAWLNKKVTFATTDITANAYIFEIRNIAAASTVGSDLAVDDIVITQPTKICQVRAEGLSVKIDNNKGFKARGTTYDEKCGKNDGSIFLTVDNPPSTFVVEYQIAGTTTWTSVTLTQLNPAQGVATLTGIPAVNNGTLLVRKANEHSCQVAFNYTINKPVPLTVTATVTAPVSCFNTFATVRFTAEGGARPYKTFRFTPITGTTPSGSQAAVNNEADFDLQVGTYVIEVEDNNGCTMTATLDVPAPKPLQIEVVDLEPCFKGGNTGRLQVKVINGNGSYQFSKDGGATFESSATNFIIYENLSVGLYNFEVKDGADCRTSTSYTIDNPLRMQVISKAALTCVPNSEAEYDITYSGGKAGGARQFLWSNSPTANFTVAAPTGIAISQSGNTYTFKTKIPGDYYFKIRYQMTNGDYCEVISPKQEIKKDAPAFVVTPTVEGINCAGVNSGKILFNNANISGGVAPYTIEFNNGLTTVTRPVGDITGLAKGIYTLTIVDASNCKSDPLGLTVTEIPAMVVSVTHTDLECSTTGTQKAQASAWVNKGGTAPFTVTLNKNGVVNATRTNVATGSRETFMNLDIGNYQIVVEDAKSCKYTYDFVVKSDANGLDARGTATIGCAANSGEIAISVYDKSGGTIGANQYIAVYREGITPPYGATTSVQETVANPLGGNDTWFHGGAVVPTTLSDGSIKMASTYTFTGVTPGVTYTFIVYDASSKCTFIKEANIPVPTQSHLEATITGVASTTCADANDGKVFVHLKNWTNNNITYQVFRYTPTYPSLGTAVANGSFALTAAPAVGQDVVIENVPAGRYFVLFTEGGTNCTQGTTNFTIGKSASLLTMTATVTRKANCQAPQPQGLGKIVVDAAGGTAPYQYYYHNTTISAAPTGTALDNALTTSTDNESKDVEAGVWKVFVRDTSGCLRENTVTVTVDSQPSVASITVDDACSDNTDYPIRVKFNSIGIGQHQYKIDGIVNWQNITVATETVLPIRLAPNPNPYTISFKDANGCETSTTFRVHEMIKFDASHLPLLPCGATNTVTINVTNITGGSGTYKFSLYRVINKGTANERAVPVVTGANVTGNAHSVITNGGIGSYLINIYDAATWGTPAECAKSLDFVVRPPEIPRLEVLSVTTPTCYAETATVRIKANPVDGIPYTFTITDNAGVAVPGVTQVLNGNYVTFNNVPSGAAILGGATYRITAVSAQVCSSTIEVTVTSPDVISTTNALSKKEYTCDADTGEVTNPQLLFDLNNVTGGTESYTRIEYRELASGTLLYQQQVTLGVTSYSYTLPSYLTTANSYYAQVYDTNGCSATTTAVTISPTLMMSGLTATQLQAKTCNVDENISVTLSTTTVYSGEPIEYSVSKVGWGTITVIPPVTLNSLTYTLTLTEPYAYVIRAKNMITGCEVSTNYTVLDPNTLLLEAKNPQRVTCYGGTGSITLELTDTRLSDGDQVANGFSYTIYPLPVGTPITGNSTGATIAHAGLPASKYRVEAISAISGCKAETTFEIVQAEAPITAFAKETASVTCDNNRGEILVTVSGGWAPYTVNIQGGAITGRKTIALNGDSALFTGLVSTGTPGGVVTYTVTVTDAWGCSVVSGTTQVGLKTPDPITATVSVTRDVTCQGDHDGEISIDPSSLSGGSGRYYYTIVDSNFNNDTHTDPKDTTFKNLLPGMYTVEIWDTWGCNLIVRQLEVKEPKPIVVNVTDSNLLVCHKGNDAWIEFTVDGGRPNYDIAIMKEGSNVPAHTDYATSSATVIRASNLTEGNYEIVVTDSVSSTTNGCVMSPTYKFSVYSAPDLDPTTEQGFSCDNNEFTTWIEVRFKDEVDFNKITYKLNGATTPQTFSRNNGVNVGYIDQNRFNMSIATQTLEIVYTDVHSVTGAVKQCTQMATKSVTVVEYRQLNNIVKSPTTVINTLQVEGVNGVKPYLYEFNGEDYDTNNVYELRMNDREYTDPVSGKKLKIVDVVVHDAAGCTFSKTFYEEYFDVFIPNFFTPDGDGNYDTWAPRRVDKYPFIRTTIYDRYGRRLKTLRAGEEWDGKYDGRDMPTGDYWYLVELSDEHDTRTFNGNFTLYR
>NC_013162.1|WP_015782483.1|1566955_1568476_+|leucine-rich-repeat-domain-containing-protein
MYLAMKTRLMMLALAVLTSATLFSCKKDDKEGDSNIVLGKSAVTLNLGGQETIKVTAPDGIKKPQSEDVNVAIATVGRDIWVTIQSKQKVGETRVKIESKTGNIAYINVTVKDKETNDRGLVVLGKTVFVDRDQEVEVTNLLKKYNDVIDKVNIKSTSSALAQVRKDGNRFFVKGIGEGLTGEVYFEDTAGENDKKKGFPKGSFIVHVRAPFLAIQSGEVGVGQTKRIDLINIYNNAFTFEGVNNDIATVEYARELSAGTEIPNGSFTGIKVTGKKAGSFVLKLINSDGDNGKGNEISLTINVTAVDNSAYIIKDGVLTGIKAGVNLKGAIKLPENVTKVAATVFKNQPELTEIDFNNVTEIEGKIFSANEDDVLGINVNLTSITLPKVVKIGDSSFRNAKKLTRVELPATLTHLGQYAFSNCTALQHVAFRGTVPPKGLGALPKTIVKGKREPAPEKPTATDAFDAGQIQLYIPLASKSAYKNALGESPFRAGGIYNPKDISEFK
>NC_013162.1|WP_009422601.1|1569434_1570160_+|iron-sulfur-cluster-repair-di-iron-protein
MSITTNKTIGEIVADDFRTAAIFKKHGIDFCCKGGRTIDEACEKKGVEKNALISELEALPKGNGNEVDVRDWPLDLLANYIVRIHHQYVHDKTPMLLQFLDKLCRVHGERHPELFEINRIFNESARDLESHFKKEEGVLFPFIESLVKAQQSGQPLGDIPFGTVENPIAMMMHEHSAEGERFEEIVKLTNNYTPPADACNTYKVTYQMLQEFETDLNRHIHLENNILFPKAIALEKQLRQA
>NC_013162.1|WP_015782484.1|1570215_1572972_-|excinuclease-ABC-subunit-UvrA
MKTKEILIKGAKLHNLKNITVGIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSSYARQFLGKLDKPKVDNIVGIAPAIAIQQKVNTSNPRSTVGTSTEVYDYLKLLFARIGKTYSPISGQEVKKHTVTDVVDAVMRYPKGTKLLLLAPVSIPKDRTVEQVLKLLLQQGYARILYKEEIILIEEDNLPKNLDNFQLVVDRVIVRHDEDFQHRLADAVETAFFEGKGECYIQEMDGVVQTHFSNRFELDGITFLEPNVHLFSFNNPYGACPKCDGYGDTIGLDEDLIVPNTGLSVYENAIYPWRGETMSWFRDQLVNNAYKFDFPIHKPWFELTNEQKQLVWDGNKYFTGLTDFFKELEDKSYKIQNRVLLARYRGKTRCHECHGKRLRKEANYVKIAGKSISDLVELPIEELQIFFKELKLTDYEQEVAKRLLLEINNRLQFLADVGLGYLTLNRKSNTLSGGESQRINLATSLGSSLVGSMYILDEPSIGLHPRDTERLISVLKSLRDLGNTVIVVEHDEDIMKAADHIIDIGPEAGTHGGEVVATGTYNELLKANTLTGKYLSGRLTIEVPKKRRTSPHYITLVGCRENNLKNIDVTFPLDMLTVVTGVSGSGKSTLVKKLLYPAIQKELDLGGEKIGQFTKIEGKYKHLQSVEFVDQNPIGKSTRSNPITYIKTYDDIRALFASQKLAKMRNFQSKHFSFNVDGGRCEVCKGEGEVTIEMQFMADVHLTCEACGGKRFKKEVLEVMYEGKNIDDLLNTTIDDAVAFFQKHKQTKIAEKLKPLQDVGLGYVTLGQSSSTLSGGEAQRIKLASFLSKSDSKEKVLFIFDEPTTGLHFHDIRKLLDSLQALIEKGHSVIIIEHNVEMIKSADYVIDLGLEGGAKGGNLIATGTPEEIAKNKKSYTGKYLKLK
>NC_013162.1|WP_009419174.1|1572976_1573981_-|virulence-RhuM-family-protein
MNTQQKIIIYKTDDGKVKISLFAKDGSVWLNQNQLADLFDTSVPNISMHISNILKDNELSPNSVIKNYLTTACDGKNYEVTFYSLDMILAIGFRVRSKRGVQFRQWANQYLKEFMVKGFVMDDERLKNPDGRPDYFDELLARIRDIRASEKRFYQKIRDLFMLSSDYDKTDKATQMFYAQTQNKILYAITGQTAAELIVSRADASQNNMALTSWEGNIVRKGDIYIAKNYLTDNEIDSLNRFVMVFLESAELRAKNRQDITMDFWRENIDRIIEFNDKKVLKGNGSVSNEQMKTIVRKVYDEFEVKRKQYDAQQADLEDLKEIEELEAHIKLLK
>NC_013162.1|WP_015782485.1|1574703_1575387_+|SIMPL-domain-containing-protein
MKQYILLFSLVSTMAIAQTQTPSVQVVGEGIVYVIPDVVNISISIEREGLDLKNLRQKNSEEVAKVLETLSKELPKENFQTSYVSLYKDDYNKINKYRVLQNITIKLEDISKYDSLMNAIFDAGVNRINSVSFDVKNKEKHLQDARVAAIEDARKKALLYAVSLDQNIGKAIAVKELSSNFNDVQPTFRSSKVSLGSSGAEANDDTLAIGKIAVEAQINVAFELLNK
>NC_013162.1|WP_002675350.1|1575395_1575521_+|FeoB-associated-Cys-rich-membrane-protein
MNTQEIIAYILVVIAVGYLVKTLFFKKKKKSCGGGTDCKCG
>NC_013162.1|WP_015782486.1|1575816_1578861_+|TonB-dependent-receptor
MKRNLFLSVLLFLLVSWSYAQQRTIRGTVSDATTKEPLMSASVVIKGTSKGVSTDMSGKYTIEVSVGQTLEVSFMGYVTQNVKVTANTPSPLNIALAEEQRKLDEVVVVGYGVTKVRDLAGAITSIKTNDVKAGVVADMSQMLKGRASGVQVRQNSLEPGGNVSIRVRGASSVSADNEPLYVIDGFQTDNMSQISIDDIESIEILKDASTTAIYGARGANGVILITTKKGKEGSFNVEYSNQTSYKNMYNPWDLLDAGETIALTRRLYEQTQDAAYGKWTAQQATYRGKGTDWLKETTHDAFTVLHQLSVSGGTDRLSAFMSGNYLTEPGILLNTDYNRYGGRINLQYKISPKVRAGANMSFSKSKKKFLDMGTVSSDKNIMYRIFNLEPWKNKEGFDVFGTKDRRPAVFEEMSGAQLYRHFNTMYATAYADIDLLPSLTINGRYTYAYDHLKTEKYYDRSTSIGQSYKGQAFLSHEENVKHQIEGVATYHPKMEGKHDVKVTAGTSYIYQRGKGDEVQAYGFASDVFSFKNIGAAQHLDWIGSGESSIKKASVFGRAEYIFNNRYIINASVRADGSSVFGADYRWGIFPAGSIAWHLGEEEFMKFAKPLFSRIKLRTSYGLSGNDGIRFGLSQYQYSVRDVYIGNDVNSKGMYPSNPYNPKLRWETTAQWNAGIDLVVGRVEASFDYYIKRTHDLLNPDPIHPSGGFPNYVNDGRRFEYTAMMVNDGEIENRGFEVAIKSTNINKNDFVWTTAFNFSHNRSEVLKLNDGKPRFQYIRPHGSYDEKEYMMLKEGEPLSAIYGYEFDGILQEGETYAPQPNSAPGDPKFKDLNGDGKIDEKDRTVLGTGIPKTIIGLNNSFTYKGFDFSFFFEASLGAKMLNLTRIYLEDNNRLSDSADRWTKAHASNSVPRNGYQKTAKLQYGSYVNSRFVEDADFVKLRNVELGYTFTGSQWNMKTLKTMRMFVGAQNLLTFTKYQGFDPDISTNGSSAIAQGLDLNSYPAYRTINFGVKLTF
>NC_013162.1|WP_015782487.1|1578873_1580547_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKTNYKLYTLVGLLGLSFTACELKEDLTSVYNANNAYTTEENAQEGVNGIYRYLLGATHTSNFYINDMSTDDCFKDGIAFEIYNENGLSGNVELARCYNGNWQMIGCANTAIDNISMIPESRFKTADRKPELLAEAHFLRAFAFYQLTNAFYRVPLITNGFYEADANPTLATVEELDDQIEQDLLIATNNLPDEWGTTTEGASGRPTKGAAYGYLMRLNMRKAGRLREEGKDATAAWQAALMYADQVITSGKYALQAKVFDVFDPSKPETLNNNEIIFAIRASDKVPSGSSDLALYFTPWEYDMGWNNINMPLELYWKFDSDDQRLKELIVTSFNNVYGKPIKYISPKLNEVGTLRNEKSNPQIVENDAVYTKKYKYTKPGTYNYNTPNNLILLRYADVLLCKAEILNELNGPTQESVDLINKIRERAFENSNHNYTLANFASKEDMRSKLCDERLFELNMEGVRRVDLIRMGLWKDRLDAYMDLVKQKLETKEANLNARRDPNVVKNPYDLSPEWKVYPKFSNPFKPYDKRRYYPIPGVYSNKFPDLQNNRSFREQ
>NC_013162.1|WP_015782488.1|1580565_1582065_+|hypothetical-protein
MKTYTKPILMAVAMLSMIGCDKSDVDGRFSDNPRSEIGTPQEGSLVTAKQVKWNFDNTNDWLNASQGEQANISQTSVESNTQAEDGKVVKIFTKSGTKERKKLKTKKQYGAGLYTWRAYISDLGTTERVSIGSWLWNSDKHELDFEVGSGTAKDRDALAAADDEVIAYITSQDNPALHQKVKIKKNAWHTFQIDLKLAGGKYFATWLIDDVKCAAQQLTYGQEHPFYIFCSTENLKFVGDSWPYKDNYGLWDYVAYTPYSYSMEPTEPQNQLNPPDPEPEPDTGEVKKWTFNSFPDDWLKWGIAKVDSGKLVLGVDSGNTIAKVQYKLGMKMGYGKYTWSVRFPDVSTIPAGTQFQSGANLYYYAEDEKGKVTERLFLMMARIGSEEDRTRLGAKPNQLLLYIQGAEPAVDEYVGLLDANKDYKLTIDLKKVNNKYTIVYSIDGNVLKTLVANYGEDEFKFFFIAEAAANRPWMKWAKLDKALTKHLETKFNFIEYTAY

Crispr_ID: NC_013162_10

• CRISPR_ID: NC_013162_10
• CRISPR_location: 1652170-1652271
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013162_10

Consensus_repeat	Method
ATAGAGGAACAAGTACAAAAAATCTTAG	CRISPRCasFinder

spacers of NC_013162_10

>10.1|1652198|46|NC_013162|CRISPRCasFinder
CATTTGTTAATTGTTAATTGTCAATCGCTTTGTATTTTTTCTTACT

CRISPR arrays and Neighbor proteins around NC_013162_10

CRISPR arrays

The CRISPR arrays of NC_013162_10

>merge|NC_013162|10|1652170-1652271|CRISPRCasFinder
ATAGAGGAACAAGTACAAAAAATCTTAGCATTTGTTAATTGTTAATTGTCAATCGCTTTGTATTTTTTCTTACTATAGAGGAACAAGTGCAAAAAATCTTAG

>NC_013162|10|9|1652170-1652271|CRISPRCasFinder
ATAGAGGAACAAGTACAAAAAATCTTAG	CATTTGTTAATTGTTAATTGTCAATCGCTTTGTATTTTTTCTTACT
ATAGAGGAACAAGTGCAAAAAATCTTAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_002675498.1|1655856_1656672_-|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	unknown	unknown	gnl|CDD|236996
NC_013162.1|WP_015782545.1|1661648_1662872_-|exonuclease-SbcCD-subunit-D-C-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|182871
NC_013162.1|WP_015782539.1|1648246_1649083_-|rod-shape-determining-protein-MreC	unknown	unknown	gnl|CDD|237560
NC_013162.1|WP_009422597.1|1651022_1651508_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_002675489.1|1654201_1654429_+|DUF3820-family-protein	unknown	unknown	gnl|CDD|378970
NC_013162.1|WP_015782536.1|1645336_1645888_-|septum-formation-protein-Maf	unknown	unknown	gnl|CDD|234807
NC_013162.1|WP_015782544.1|1659744_1661376_+|acyl-CoA--6-aminopenicillanic-acid-acyl-transferase	unknown	unknown	gnl|CDD|367486
NC_013162.1|WP_002675487.1|1653854_1654148_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	unknown
NC_013162.1|WP_015782535.1|1644711_1645158_-|polymer-forming-cytoskeletal-protein	unknown	unknown	gnl|CDD|377376
NC_013162.1|WP_015782540.1|1652341_1653469_+|biotin-synthase-BioB	unknown	unknown	gnl|CDD|215219
NC_013162.1|WP_015782538.1|1647743_1648250_-|rod-shape-determining-protein-MreD	unknown	unknown	unknown
NC_013162.1|WP_015782532.1|1642978_1643320_-|TM2-domain-containing-protein	unknown	unknown	gnl|CDD|377473
NC_013162.1|WP_015782533.1|1644145_1644529_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_002675485.1|1653619_1653883_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782537.1|1645887_1647747_-|penicillin-binding-protein-2	unknown	unknown	gnl|CDD|274573
NC_013162.1|WP_015782534.1|1644518_1644761_-|AtpZ/AtpI-family-protein	unknown	unknown	gnl|CDD|378198
NC_013162.1|WP_015782541.1|1654409_1654919_+|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl|CDD|100051
NC_013162.1|WP_002675473.1|1649118_1650147_-|rod-shape-determining-protein	unknown	unknown	gnl|CDD|237562
NC_013162.1|WP_015782542.1|1655263_1655791_+|DUF3575-domain-containing-protein	unknown	unknown	gnl|CDD|379226
NC_013162.1|WP_015782543.1|1656683_1659320_-|valine--tRNA-ligase	unknown	unknown	gnl|CDD|235582

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_002675498.1|1655856_1656672_-|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	gnl|CDD|236996	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional.	2.75254e-158
NC_013162.1|WP_015782545.1|1661648_1662872_-|exonuclease-SbcCD-subunit-D-C-terminal-domain-containing-protein	gnl|CDD|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	8.07137e-68
NC_013162.1|WP_015782539.1|1648246_1649083_-|rod-shape-determining-protein-MreC	gnl|CDD|237560	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional.	1.59996e-67
NC_013162.1|WP_015782540.1|1652341_1653469_+|biotin-synthase-BioB	gnl|CDD|215219	PLN02389, PLN02389, biotin synthase.	1.53712e-171
NC_013162.1|WP_015782536.1|1645336_1645888_-|septum-formation-protein-Maf	gnl|CDD|234807	PRK00648, PRK00648, Maf-like protein; Reviewed.	1.45437e-106
NC_013162.1|WP_002675489.1|1654201_1654429_+|DUF3820-family-protein	gnl|CDD|378970	pfam12843, QSregVF_b, Putative quorum-sensing-regulated virulence factor. QSregVF_b is a family of short Pseudomonas proteins that are potential virulence factors. The structure of UniProtKB:Q9HY15 a secreted protein has been solved and deposited as Structure 3npd, from pfam13652. It is predicted that these two adjacent proteins form a single transcriptional unit based on the prediction that together they interact with their adjacent protein PotD, which is the putrescine-binding periplasmic protein in the polyamine uptake system comprising PotABCD. These two adjacent proteins are predicted to be quroum-sensing-regulated virulence factors.	1.99616e-35
NC_013162.1|WP_015782544.1|1659744_1661376_+|acyl-CoA--6-aminopenicillanic-acid-acyl-transferase	gnl|CDD|367486	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.	1.9054e-13
NC_013162.1|WP_015782535.1|1644711_1645158_-|polymer-forming-cytoskeletal-protein	gnl|CDD|377376	pfam04519, Bactofilin, Polymer-forming cytoskeletal. This is a family of bactofilins, a functionally diverse class of cytoskeletal, polymer-forming, proteins that is widely conserved among bacteria. In the example species C. crescentus, two bactofilins assemble into a membrane-associated laminar structure that shows cell-cycle-dependent polar localization and acts as a platform for the recruitment of a cell wall biosynthetic enzyme involved in polar morphogenesis. Bactofilins display distinct subcellular distributions and dynamics in different bacterial species, suggesting that they are versatile structural elements that have adopted a range of different cellular functions.	3.10922e-30
NC_013162.1|WP_015782532.1|1642978_1643320_-|TM2-domain-containing-protein	gnl|CDD|377473	pfam05154, TM2, TM2 domain. This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts.	6.58675e-14
NC_013162.1|WP_015782537.1|1645887_1647747_-|penicillin-binding-protein-2	gnl|CDD|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	2.63734e-172
NC_013162.1|WP_015782534.1|1644518_1644761_-|AtpZ/AtpI-family-protein	gnl|CDD|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	6.06596e-15
NC_013162.1|WP_015782541.1|1654409_1654919_+|gamma-carbonic-anhydrase-family-protein	gnl|CDD|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	5.17365e-79
NC_013162.1|WP_002675473.1|1649118_1650147_-|rod-shape-determining-protein	gnl|CDD|237562	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional.	0
NC_013162.1|WP_015782542.1|1655263_1655791_+|DUF3575-domain-containing-protein	gnl|CDD|379226	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	0.00373609
NC_013162.1|WP_015782543.1|1656683_1659320_-|valine--tRNA-ligase	gnl|CDD|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0

Protein sequences

>NC_013162.1|WP_009422597.1|1651022_1651508_+|hypothetical-protein
MNDFLNAQESRKNNRTKNIVAVIVGVVSFIVVFLAAFFTTRYLTSSFFSKAKNDLVTDEMKNQVAEINRQLPQIIEEGVRLDSVALKGEKTMGYYATLFNFDSEGVEFDASAAKEAIVQNLRTNRGKMRFFIDNNITLYYYYYDKNKKVVTEIEIAPSLYK
>NC_013162.1|WP_002675473.1|1649118_1650147_-|rod-shape-determining-protein
MGFFDFLTEEIAIDLGTANTLIIHNDRVVIDSPSIVAIDRTTRRIIAVGREARLMQGKTHPNITTVRPLKDGVIADFDASEQMIGMLIKSIPALRKRFFSPSLRMVVCIPSGITEVETRAVRESCERVNGKDIYLVHEPMAAAIGIGLDIMQPKGNMIIDIGGGTTEIAVIALGGIVCDKSVKIAGDIFNSDIVHYMRTQHNLYVGESTAENIKMTVGAATEDLDAPPDDIMVQGRDLLTGKPKQVQVSYREMVKALDKSILRIEDAIMETLSQTPPELAADIYNTGIYMAGGGSMLRGLDKRISMKTDLPVYVAEDPLRAVVRGTGITLKNINKFRSILLK
>NC_013162.1|WP_015782539.1|1648246_1649083_-|rod-shape-determining-protein-MreC
MNQIIQFFMRSRDFFVFLALFLCAIGLVFNSNYYPQSAYINSANAVSGRLYSFTDYWAQYFSLRGQNETLTEENRALRSQLLRMEQQIRNISLVDSVSFPTTDSLKYKVLKANVIKNSFRLKNNYLTIDKGTKDGVKQDMGVLSPQGVVGIIENTSERFATVQSVLNTRSALNAMVKRTQHFGSLRWDTREVNKVQLLEVPNIAPIQNGDTIVTGGMSNIFPKGIPIGRIVHFEKSKKDNTYIIDVKLFADMSNLEYVYIIEDRDRAAVSELEKQNPK
>NC_013162.1|WP_015782538.1|1647743_1648250_-|rod-shape-determining-protein-MreD
MSHPVVRNVYLFVFLVLLQVLIFNNVEYWGYVNPMVYIVFILLLPYRENRTPSLVAAFLIGLCIDIFSNTGGLHAASSVLIAYLRNPILLTVFGKNFEYQELDLLAYPFSKIFSYTTLMVVVHHTLFYFLEVFNFNHLFLTLAKIVGASIFTIIVCLLFIYLFSKNKK
>NC_013162.1|WP_015782537.1|1645887_1647747_-|penicillin-binding-protein-2
MRKYLLPIIILFVAVVFLVRLFFLQVIFHEENTGIDNIAIETVYDYPERGYIYDRNGELLVSNQPAYDVMVVPSEVKTLDTLELCGLLEISKEEFRERLIKARDYSRKKPSVIVHQLSKDDYAVLQEKLRKFQGFYIQKRMLRSYLTHNAGNVLGYISEVNEWELKKNPYYLAGELIGRSGVEKQYEEFLRGKKGVQFFQKDKHNAAIERYKNGAMDTLPITGQPLQLTIDINLQAYGEMLMQHKHGGIVAIEPKTGEILALISAPTFDPALLVGRERSKNYTALYNDSIAKPLYDRTLLAEYPPGSPFKVINALIGLQEGVITPGSVFSCGGGYRFGGRIMRCHCGRSSNDLLHGIAFSCNSYFANTYKRAIDMKTTSAVGMDKWNAHVRSFGLGGFLGADLPTGRAGKVPNTALYDKQYGKGRWNGTTNISNAIGQGELLTTPIQLANVMAAIANRGYYYTPHIVKKIDNKITPFQEYTVAKHTTIAPKNFEPVIRGMNMAYEQGTARRTQIEGINIAAKTGTAENFIKVNGKRMQLTDHSIFVAFAPIEDPKIAIAVFVENGYYGARVAAPIASLMIEKYLKGEVYRCDLEKQMLEKSLEDEYMKPYSGLPFTINR
>NC_013162.1|WP_015782536.1|1645336_1645888_-|septum-formation-protein-Maf
MKKIILASGSPRRQQFLKELDIPYEVVLKPIDETYPKHLKREQITDYLAQLKATPFTGEIPTDCVLLTSDTIVWHEGKALGKPKDATEAFTMLRSLSGKTHEVITSICFTTNEKQITEYCITKVTFKELSDDEITYYISHYQPFDKAGAYGIQEWIGHIGVTTIEGSYNNVMGLPTHLIKEQI
>NC_013162.1|WP_015782535.1|1644711_1645158_-|polymer-forming-cytoskeletal-protein
MAIFNKERDNKKIIMAAENPTGSSNRIVTETKFKGEINSKSDFRIDGEVEGTFQTSGKLVVGRTGVIKGTVICENADIEGKITGTLKVSSILSLKSTAVVEGEVYVDKLSIEPGAVFNVSCSMKGGKNSFTINEKPQAPVTAEKQPPK
>NC_013162.1|WP_015782534.1|1644518_1644761_-|AtpZ/AtpI-family-protein
MKNHKHQLQPKNNHLNKWITFSQIGLQMAITIAICSFFGVWLDGKFPNKYSLWTVVCSLFGVFGAMYSVIKKAQQMSDEE
>NC_013162.1|WP_015782533.1|1644145_1644529_-|hypothetical-protein
MKSNILLFVKYLLLLIAGGVGLFWLYDYCVNTEGISLYYSLKTLLIFHCGLSFFLFSIIFIVNKRRKQHTAFAFMAGFVLRFVAVVILSLPLVKTVSPSPLYEMLFILLPSFYFTIIEAVLAIRLIK
>NC_013162.1|WP_015782532.1|1642978_1643320_-|TM2-domain-containing-protein
MDAQKVDMFIVTNGKFFRPEIVPQIREKLLSLDESKWVMLQTIQFKDPTTSILISIFAGHLGIDRFYIGDVGMGVGKLLTCGGLGIWTIVDWFLIMDATRDKNAELLASALSY
>NC_013162.1|WP_015782540.1|1652341_1653469_+|biotin-synthase-BioB
MCENQHTCGCSNAETRHNWTKEEIMAIYNKPLMELLYEAATVHRKYHDPNSVQVSTLLSIKTGGCSEDCAYCPQSARYETEVKIENADMMSVTHVKAQALRAKSAGASRVCMGAAWRNVKDGPEFEQVLEMVRTINKLDMEVCCTLGMLTENQAQRLAEAGLYAYNHNLDTSEEYYKEIISTRSYDDRLKTIDNVRKTNITVCSGGIIGMGESLEDRAGMLVALSTLNPQPESVPINALVPVEGTPLEDCEPVDIFEMVRMVATARIVMPQSQVRLSAGRTQMSQEGQALCFFAGANSIFAGDKLLTTPNPDINEDMQMLGVLGMRIQKPFETHPQPQTVEAEDSQYHSLGENPKWTRPNHKIERNEGKRVRATH
>NC_013162.1|WP_002675485.1|1653619_1653883_+|hypothetical-protein
MDTTTLKITFNPTELSIFQPLFDKFKLKTTVVERADDFSELTEEDLRSLALSEEQSRLGMLVDSSEVHRRATERRRQRYESKVDSRS
>NC_013162.1|WP_002675487.1|1653854_1654148_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MKVKWTQEAERNYNDTLDYWDERNGSFSYSDKITKALIDLEKEISIDPYALSYYNKDLNIYRRTILKGKFLVYYKVDKEKNIIEIRHFRSSKQKPLF
>NC_013162.1|WP_002675489.1|1654201_1654429_+|DUF3820-family-protein
MNSEILKEIITTPMPYGKYKGTMIADLPSYYLEWFSTQGFPKGKLGMLLATTFEIKTNGLQEIIDKLKEYVSQES
>NC_013162.1|WP_015782541.1|1654409_1654919_+|gamma-carbonic-anhydrase-family-protein
MLVKKVNGKQPTFGEGCFFAENATLTGDVHLGDHCTVWYNAVIRGDVNTICIGDDTNIQDGVVIHATYQTHPTTIGNRVSIGHNAIVHGCTIEDDVLIGMGSIVMDGCVVESHSIVAAGAVVPPNTHIEKGSLYAGVPAKKLKNITDEQRTLIERTALNYPKYASWIEK
>NC_013162.1|WP_015782542.1|1655263_1655791_+|DUF3575-domain-containing-protein
MKKIIVAVMLMFFSAKTFAQSDFPQHQVNLNILNVIWLASVELGYEHYIAPNQSIEGTIFFNDRFSVFPRKEGEKYRATSIQIGYNYYFEEDGGTGLYVNPFIKQRFGTFSEDGVKTRLDSFILGVGAGYQWNLDDTFIIAPFANIARNFGKQVNENKKFWAIEPNFGIKIGYKF
>NC_013162.1|WP_002675498.1|1655856_1656672_-|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase
MEHLKQMIDEAWENRSLLREEIVQQTIREVIHLLDLGKLRVAEPTADGWKVNEWVKKAVVLYFPIQNMKPVEVGIFEFHDKIPLKHNYDEKGVRVVPPAVARRGAFIAKGAILMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKHVHLSGGVGVGGVLEPLQAAPVIVEDGAFIGSRCILVEGVRVGKEAVLGANVVLTASTKIIDVTGNEPKELKGYVPERSVVIPGSYTKHFPAGDYQVPCALIIGQRKASTDKKTSLNDALREYGVSV
>NC_013162.1|WP_015782543.1|1656683_1659320_-|valine--tRNA-ligase
MTEPKKYNPTDLEEKWYAYWLAHNYFHSTPDERTPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEAKVVAKLKEQGIKKSDLTREEFLVHAWEWTHQYGGVILEQLKKLGCSCDWERTKFTMDEELSASVIKVFVDLYNKGQIYRGHRMVNWDPEAKTTLSDEEVIYEERQGFLYYLKYQIEGTNEYLIIATTRPETIFGDTAICINPNDERWQHLKGKKAIVPICNRVIPIIEDEYVDVEFGTGCLKVTPAHDPNDKVLGDKHQLEVIDIFNDDATLNHYGLHYAGKDRFVVRKEIVAELEEKNLLAKKETYTNKVGTSERTKAVIEPRLSDQWFLKMDTLIQPAIKAVLEDESIKLYPKKFENTYRHWVENVRDWNISRQLWWGQQIPAYYYGEGKDQFVVAKTKAEALALAKEKSGNAHLTEADLRQDEDALDTWFSSWLWPMSVFNGILEPNNPEIEYYYPTNDLVTGPDILFFWVTRMIVAGYEYKGERPFSNVYLTGLVRDKQRRKMSKSLGNSPDALKLISDYGADGVRVGLLLSSAAGNDLLFDEALCQQGKGFGNKLWNAFQLVKGWQVDSSVAQPTAAQLALQWFEAKFNAVLTEVEDHFEKYRISDALMAIYKLAWDDFCAWLLEMVKPEYGKPMDKATYEGVVAAFENLLKLLHPFMPFLTEEIWQSLAPRTPEQALIVATYPTVQPYDEKLLAEFDFAAEVIAGIRTVRKEKNIPFKTPLSLSVLNKEQMSNRFDVVLSKMGGLEAITEVSTAIEGAMSFRVKANEYFIPMEGAVNVEEELKKLQEELTYTQGFLASVRKKLSNEKFVNSAPAQVVDNERKKEADALAKIETLEKAIKAINN
>NC_013162.1|WP_015782544.1|1659744_1661376_+|acyl-CoA--6-aminopenicillanic-acid-acyl-transferase
MKKLLLLTFYLLLTSCGIFYKKITPPEVTYPYQKPQITVLNDTLRYFQDNYIAKNQQGLWELYLSGNPYQLGLNSGALTEPLYHRQDSLLFVKLNQFVPSQRKQRFLRKFVKWFNRDINNCVIPPFRQELWGQAQYSDTIFNYIAPVYQRTLYLHSAHDLGHALQDLMLVGCSSLAVWGDKTEDGQLLIGRNFDFYLSDDFATEKIVRFVRPEEGIPFMSYAWGGMIGVLSGMNLEGLTVTINAGKSSIPLKARTPISLLCREILQYAKNIDEAIAIAKKRKVFVSEAIMVGSATDGKAVIIEVSPKKFGVYEAPNAVLCANHFQSEVYKKDKKNLKQIRTSHSAYRYAKMQEFLTEEPKLTPSKIATLLRSTEGLHADSIGYGNEKALNQLLAHHAVIFKPQERLVWVSTAPYQLGTFVAYDLKQIFATKAYPSHSPYPQTSLNIPPDPFMYTQAFKDYEAYRVLEQQIETHLREHTPIVIDEVKPITSLNPHYWKAYYLLGRAYQTQGNKETAHQLFQKALQCEIPYSEEREKIQKLVNKN
>NC_013162.1|WP_015782545.1|1661648_1662872_-|exonuclease-SbcCD-subunit-D-C-terminal-domain-containing-protein
MNLLHTADWHLGQTFYQYDRYNEHQYFLDNLLQIIEEQHTDVLLISGDVFDTANPAVASVKQFYHFLHQATERFPQLQIIAIAGNHDSPVRLEMPQPLLEDTQVHLVGYVKRNEQREIDYKRLIIPLYERGEVMAYCLAVPFLRLGDTPKNEDTNPDYTQGVEAFYREITEKALAIAKGKPLIAMGHLHALGAELSDEDTAERPIIGGMEGFKPTSFPNVLQYIALGHIHKAQTLGGKAHIRYSGSPIPLSFSEKDYQHQVVAFSLEEGRVQDIKTVPIPLHTPMLSVPERPLPVKEVLNALASLPKGTTHTPAPYLEVKVLLNEPAPELKNSILKAIAHKHVRLARIDVRYQQQQNTKKETLQKEITLNDLQPYEVLQRVYQNKFQKELPEFYKPLFDEAMEKATD

Crispr_ID: NC_013162_11

• CRISPR_ID: NC_013162_11
• CRISPR_location: 1720299-1720456
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013162_11

Consensus_repeat	Method
CCCCCTCCAAAGGGGGAATGTAGTGACGGAAAAGGGGAGAAATGACGAA	CRISPRCasFinder

spacers of NC_013162_11

>11.1|1720348|60|NC_013162|CRISPRCasFinder
TGACAAGTGACGAATGACGAAGGCGGACTTCCGTTCAAAAAGGGAGATAACATCCCCCTA

CRISPR arrays and Neighbor proteins around NC_013162_11

CRISPR arrays

The CRISPR arrays of NC_013162_11

>merge|NC_013162|11|1720299-1720456|CRISPRCasFinder
CCCCCTCCAAAGGGGGAATGTAGTGACGGAAAAGGGGAGAAATGACGAATGACAAGTGACGAATGACGAAGGCGGACTTCCGTTCAAAAAGGGAGATAACATCCCCCTACCCCCTTCAAAGGGGGAATGTAGTGACGGAAAAGGGGAGAAATGACGAA

>NC_013162|11|10|1720299-1720456|CRISPRCasFinder
CCCCCTCCAAAGGGGGAATGTAGTGACGGAAAAGGGGAGAAATGACGAA	TGACAAGTGACGAATGACGAAGGCGGACTTCCGTTCAAAAAGGGAGATAACATCCCCCTA
CCCCCTTCAAAGGGGGAATGTAGTGACGGAAAAGGGGAGAAATGACGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_015782577.1|1717363_1718608_+|glutamyl-tRNA-reductase	unknown	unknown	gnl|CDD|234592
NC_013162.1|WP_015782576.1|1716284_1717205_+|hypothetical-protein	unknown	unknown	gnl|CDD|224747
NC_013162.1|WP_015782583.1|1725757_1727245_+|LptF/LptG-family-permease	unknown	unknown	gnl|CDD|367632
NC_013162.1|WP_015782574.1|1713251_1715228_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl|CDD|235542
NC_013162.1|WP_015782571.1|1709687_1710962_+|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NC_013162.1|WP_015782581.1|1720693_1725034_+|translocation/assembly-module-TamB	unknown	unknown	gnl|CDD|367909
NC_013162.1|WP_015782588.1|1734896_1739027_-|response-regulator	unknown	unknown	gnl|CDD|223715
NC_013162.1|WP_015782587.1|1733252_1734836_-|alpha-galactosidase	unknown	unknown	gnl|CDD|269878
NC_013162.1|WP_009418633.1|1727512_1728859_+|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl|CDD|376587
NC_013162.1|WP_015782578.1|1718695_1719442_-|murein-L,D-transpeptidase-catalytic-domain-family-protein	unknown	unknown	gnl|CDD|379310
NC_013162.1|WP_009751643.1|1728871_1729906_+|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl|CDD|376764
NC_013162.1|WP_015782570.1|1709013_1709685_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_013162.1|WP_015782573.1|1711792_1712455_-|deoxyribose-phosphate-aldolase	unknown	unknown	gnl|CDD|234784
NC_013162.1|WP_002670844.1|1730693_1730954_+|50S-ribosomal-protein-L27	unknown	unknown	gnl|CDD|235464
NC_013162.1|WP_015782575.1|1715300_1716167_-|hydroxymethylbilane-synthase	unknown	unknown	gnl|CDD|234612
NC_013162.1|WP_015782569.1|1704774_1708077_-|gliding-motility-associated-C-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|372639
NC_013162.1|WP_015782582.1|1725109_1725757_+|outer-membrane-lipoprotein-carrier-protein-LolA	unknown	unknown	gnl|CDD|319983
NC_013162.1|WP_015782586.1|1731741_1733223_-|DUF4832-domain-containing-protein	unknown	unknown	gnl|CDD|374373
NC_013162.1|WP_015782572.1|1711028_1711793_-|exodeoxyribonuclease-III	unknown	unknown	gnl|CDD|197336
NC_013162.1|WP_015782584.1|1730039_1730666_+|50S-ribosomal-protein-L21	unknown	unknown	gnl|CDD|235510

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_015782577.1|1717363_1718608_+|glutamyl-tRNA-reductase	gnl|CDD|234592	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed.	2.52515e-106
NC_013162.1|WP_015782576.1|1716284_1717205_+|hypothetical-protein	gnl|CDD|224747	COG1834, COG1834, N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism].	1.21022e-27
NC_013162.1|WP_015782583.1|1725757_1727245_+|LptF/LptG-family-permease	gnl|CDD|367632	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this.	5.46245e-49
NC_013162.1|WP_015782574.1|1713251_1715228_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl|CDD|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	0
NC_013162.1|WP_015782571.1|1709687_1710962_+|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.59101e-27
NC_013162.1|WP_015782581.1|1720693_1725034_+|translocation/assembly-module-TamB	gnl|CDD|367909	pfam04357, TamB, TamB, inner membrane protein subunit of TAM complex. TamB is an integral inner membrane protein that forms a complex - the translocation and assembly module or TAM - with the outer membrane protein, TamA. TAM is responsible for the efficient secretion of the adhesin protein Ag43 in E.coli K-12.	1.32111e-49
NC_013162.1|WP_015782588.1|1734896_1739027_-|response-regulator	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.67942e-41
NC_013162.1|WP_015782587.1|1733252_1734836_-|alpha-galactosidase	gnl|CDD|269878	cd06592, GH31_NET37, glucosidase NET37. NET37 (also known as KIAA1161) is a human lamina-associated nuclear envelope transmembrane protein. A member of the glycosyl hydrolase family 31 (GH31) , it has been shown to be required for myogenic differentiation of C2C12 cells. Related proteins are found in eukaryotes and prokaryotes. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.	2.36545e-161
NC_013162.1|WP_009418633.1|1727512_1728859_+|cytochrome-ubiquinol-oxidase-subunit-I	gnl|CDD|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	0
NC_013162.1|WP_015782578.1|1718695_1719442_-|murein-L,D-transpeptidase-catalytic-domain-family-protein	gnl|CDD|379310	pfam13645, YkuD_2, L,D-transpeptidase catalytic domain. This family is related to pfam03734.	7.66899e-81
NC_013162.1|WP_009751643.1|1728871_1729906_+|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl|CDD|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	5.24534e-90
NC_013162.1|WP_015782570.1|1709013_1709685_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.36945e-66
NC_013162.1|WP_015782573.1|1711792_1712455_-|deoxyribose-phosphate-aldolase	gnl|CDD|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	1.1384e-114
NC_013162.1|WP_002670844.1|1730693_1730954_+|50S-ribosomal-protein-L27	gnl|CDD|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	2.32895e-50
NC_013162.1|WP_015782575.1|1715300_1716167_-|hydroxymethylbilane-synthase	gnl|CDD|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	6.50598e-116
NC_013162.1|WP_015782569.1|1704774_1708077_-|gliding-motility-associated-C-terminal-domain-containing-protein	gnl|CDD|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	2.58352e-13
NC_013162.1|WP_015782582.1|1725109_1725757_+|outer-membrane-lipoprotein-carrier-protein-LolA	gnl|CDD|319983	cd16325, LolA, LolA, a periplasmic chaperone. This family contains periplasmic molecular chaperone LolA which binds to outer-membrane specific lipoproteins and transports them from inner membrane to outer membrane (OM) through LolB, a lipoprotein anchored to outer membranes. There are five Lol proteins (LolA, LolB, LolC, LolD, and LolE) involved in the sorting and membrane localization of lipoprotein and are highly conserved in Gram-negative bacteria. LolA accepts OM-specific lipoproteins that are released from the inner membrane by the LolCDE complex and transfers them to the OM receptor LolB. Studies have shown that hydrophobic surface patches large enough to accommodate acyl chains of the OM lipoproteins and the structural flexibility of LolA are important factors for its role as a periplasmic chaperone.	7.54041e-19
NC_013162.1|WP_015782586.1|1731741_1733223_-|DUF4832-domain-containing-protein	gnl|CDD|374373	pfam16116, DUF4832, Domain of unknown function (DUF4832). This family consists of uncharacterized proteins around 200 residues in length and is mainly found in various Bacteroides and Capnocytophaga species. The function of this family is unknown. Distant homology analysis suggests a possible similarity of proteins from this family to TIM barrel glycoside hydrolases and, subsequently its involvement in carbohydrate metabolism.The domain lies downstream of glycosyl hydrolases 42 suggesting that as a domain it might represent the carbohydrate-binding region of the enzyme.	1.07236e-81
NC_013162.1|WP_015782572.1|1711028_1711793_-|exodeoxyribonuclease-III	gnl|CDD|197336	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Neisseria meningitides Nape and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Neisseria meningitides Nape and NExo. Nape, found in this subfamily, is the dominant AP endonuclease. It exhibits strong AP endonuclease activity, and also exhibits 3'-5'exonuclease and 3'-deoxyribose phosphodiesterase activities.	2.64871e-121
NC_013162.1|WP_015782584.1|1730039_1730666_+|50S-ribosomal-protein-L21	gnl|CDD|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	4.42752e-46

Protein sequences

>NC_013162.1|WP_015782578.1|1718695_1719442_-|murein-L,D-transpeptidase-catalytic-domain-family-protein
MNKKYFFLFLIFVLSSFLYFVHAQNSHLSKEKLLALKKVELNIKDLYNELNAAQYDLSFEAFRYAYIGYQSLRKQHRLNEKDLFSIIDFTKDSSSKRFYTIDLEKMKIVYYTYVAHGRNSGEIKSSSFSDAMESNKSSIGFYITGATYIGSKGFSLMLYGDEKGYNSNLAKRAVVIHTANYANENYIARTGRMGRSLGCPVLPENIYKQVIETIKEKTMIFAYYDDAKYLSSSKYLNVLKLIDNESVF
>NC_013162.1|WP_015782577.1|1717363_1718608_+|glutamyl-tRNA-reductase
MTQPTISKNKTFYCIGLSYQKADATMRGMFSLTPENKDQLLSQAKSEGFEELLVISTCNRTELYGYAEHPFQLIQLLCENSNGSVDDFQKVGYVTKNKEAVHHLFEVGTGLDSQILGDFEIIGQIKQAFNLSRDKGLAKAFLERLMNSVINASKRIKNETALSSGAASVSFTAVQYIMQNIPEVSQKNILLFGVGKIGRNTCENLIKHTQNEHITLINRTREKAEQIAGKFNVIVKDFNELRNEISKADVLIVATGAATPTVYKDFINPAQPILILDLSIPKNVEEQVATLPNVTLLHMDELSKRKDEALERRKEAIPQALEIVEEVKEEFFQWLDNRKFAPTIKALKAKLESLKEAEMDFQRKKIENFNEQQAEMISNRIIQKITTQFVNHLKDTSSVDESISWVQEVFQLEV
>NC_013162.1|WP_015782576.1|1716284_1717205_+|hypothetical-protein
MLKLHITNETDQLETVILGTATSNGPTPKLEEAYDPKSAEHIKAGTYPIEKDMVAEMDAFCAVLQKYGVTVYRPEIITDCNQIFTRDIGFVIEDTFIKANILPDRQEEFQAIEYIVNQIDPKKVITPPADVHIEGGDVMPWNDHIFIGTYKGEDYKQQITARTNVAGVAFIQKLFPQKKVKEFDLVKSQTEARDNALHLDCCFQPIGKDKGIIYKGGFRCEADYQYLVDLFGKENLFHIEREEMYHMFSNIFSISPEVVVSEKNFTRLNNWLRSQGFTVEEIPYAEIAKQEGLLRCSTLPLSRCGN
>NC_013162.1|WP_015782575.1|1715300_1716167_-|hydroxymethylbilane-synthase
MNTIRIGTRDSELALWQAKTVQNQLKTLGYPTEIVSTKSHGDIELSKPLYEMGVTGIFTKALDIALLNGEIDIAVHSMKDVPTALPEGIAVGAVLKRGNPHDVLVYKGDLSFLEAEIATIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERINKLPEKHLVLDWMLPAPAQGAIVVVVREDNVALQKKLLPLHDDYTYIATQLERDFLRALEGGCTAPIGAFAEFKDDKLYFKGGLWSEDGKEASVIDEVLTQIDEYTGEKLATMIKG
>NC_013162.1|WP_015782574.1|1713251_1715228_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MAEELYNEQQNSAEYSADNIQSLEGMEHVRMRPSMYIGDVGTRGLHHLVYEVLDNSIDEALAGYCDTISVTINEDNSITVEDNGRGIPVDVHKKEGVSALQVVMTKIGAGGKFDKGSYKVSGGLHGVGVSCVNALSDHLTATVYRDGKIWQQEYQRGVAMYPVKQVGNTDKRGTKVTFHPDEVIFEQTIEYKYDTLAARIRELAYLNKGITITLTDLRNKDEKGNFITEKFYSQNGLKEFVKFLDGNRMPIIGNVIAMDGEKNGIPVEVAMIYNDSYNENLHSYVNNINTSEGGTHLQGFRMGLTRTLKAYADKSGLLEKMSKDKKNPVEIEGDDFREGLTAVISVKVAEPQFEGQTKTKLGNREVTSAVSQAVGQMLEDYLEENPNDAKTIVEKVILAAQARQAARKAREMVQRKSVMSGGGLPGKLADCSEEDPEKCELFLVEGDSAGGTAKQGRNKDIQAILPLRGKILNVEKAMQHKVFDSDEIKNIYTALGVTVGTEEDAKALNLSKLRYHKVIIMCDADVDGSHITTLILTFFFRYMRELIENGHVYIATPPLYLVKSKNSKREEYAWNDKQRDALSAEMGNVNIQRYKGLGEMNDHQLWDTTMNPEHRTLRQVTIDNATEADRVFSMLMGDEVPPRREFIEKNAKYAKIDA
>NC_013162.1|WP_015782573.1|1711792_1712455_-|deoxyribose-phosphate-aldolase
MELNKLIDHTLLKATATIADIETLCKEAVEYDFYSVCVNSCYVTTAKKFLAGTDIKVCSVVGFPLGAMSAKAKYFETGEALSDGADEIDMVLNVGLLKSGEVNKALDEIISLKRCVGENRVLKVILETCYLTDEEKRLACRMALDAKADFVKTSTGFGSGGATLADVKLMKECVQDKAKIKASGGIRDYETAMQYVNLGVQRIGTSNGIAILKGEKGTGY
>NC_013162.1|WP_015782572.1|1711028_1711793_-|exodeoxyribonuclease-III
MKIISYNVNGIRAALTKGFAEWLKSANPDVLCLQEIKATEDQIPTEVFSELGYKYQYYHSAEKKGYSGVAILSKIEPKHVEIGTGIDYMDKEGRVLRADFETLSVMSLYLPSGTNPDRLDFKLTFMADFKKYIDKLKQKVPNLVICGDYNICHEAIDIHDPIRNANVSGFLPIEREWLDKFMKSGFIDSFRYFHKEAHQYSWWSYRANARNNNKGWRIDYHLVSAPLENRMERALILPEAKHSDHCPILLMVND
>NC_013162.1|WP_015782571.1|1709687_1710962_+|HAMP-domain-containing-histidine-kinase
MKISLKNYTLRYLTLTFLLILAVWAAVFYAYILDEVYDNIDDGLKDKKTLIIQNILRHPELLKINEFGIEDFRVYPSQDDFSDHNILSNAFFYMPFDDEDEPYRVLKTSFYDRDMNPYTLEIRTSTVEKDDLLFNLAIALGVLYVVLVLSMYLVNLLVINKIWKPFKGILTAIRQYEVGNKTKLQPIVTDVIEFNVLHDNIQQMWQRNEVVFEEQKVFIENASHELQTPLAITLNKLELLADDPSLTEKQLVQLSEVKQSLMRMTHLNKSLLMLTRIENHQYKQAESISFQALTATIIEDLSDLIAFKELKITVKEDSDFQVEMNKDLATVFVSNLLRNAIKYTEKGREIQVRLEENCFQVKNTAKDGIRLHPNKIFQRFHKGQQDATSTGLGLAIVKSIADSYQLQVKYSFEEEMHCFTLKKK
>NC_013162.1|WP_015782570.1|1709013_1709685_+|response-regulator-transcription-factor
MKILIIEDEKELRLTLRQFLEQEHFLVETAKDYPSGLAKLADYDYDCILLDIMLPNGSGMQLLDELRAMKKNHSVLIISAKDSVEDKVLGLEKGADDYLAKPFHLAELLARVKSIIRRKNQQGEEVITLKNVQFFPETRTVKVGDTTLTLNRKEYDLLYYFIIRPERLVEKTTLAEAVWGDYIDQVDSLDFIYSQIKNLRKKLKTAEAEIDLQAVYGIGYKLV
>NC_013162.1|WP_015782569.1|1704774_1708077_-|gliding-motility-associated-C-terminal-domain-containing-protein
MKVSNFFKYISVFLLLYFFGIEGVQGQDNKLVSAKTNFSFVCASATNNGKLQPNNPKDDSGFRISVRWSPPLPNADNKYIFELSDANGSFNNPTVLQTQNEKFWPGKTLNTAQTFEAYVTFPKTLKGKKYRIRVRSTNPASEIIATIGSSPNQEFEGSYMNVAQALKTTPSGNINLCPGQSLEISVAQIFTSVGSTNISDYKYVWYRKPFDPSYHGSSWGIKIPNQTGPKLTVTEEGTYIVAIDYGDNCFDRNYSKSNNITVKVAGGGQSLVLSSSATEICSSESFTLTATPASNETYTWYRDNTKLGETNGVATYVVSPPNNLPGKYRVQIGNGSACDVRSNEIEIKHKDAIKANITTTGGNVLLPNKQRTLTVNTTAQNPSYKWFKDGVEIPGQTANTYVATSAGKYKAQVTQTGSCASTIETEEYELKAPDSFKVSIKPKTSYQPCETNSIDLTVDKITAVSGATELAIDPSDYSFFTFQWQRETGGAFTDINTTQEITLNSATQNGKYRLKITASGFPAIPESNVLDIQLQDSNALRINNSVDNVDFCGEVYTLTVTTGADPTATYTWFKDRVQIAQGVGMTEYGVTTTGVYYATIGGTGGGCPATSNSVVAKRTVITARWAEDMNTREIYYPAKTTVLKISHNMTNPTVEWKKNGTVITGATGVEYTVTDTPVSADVYEAKITDGGSCGTSISLTPIYFETIADIKGVRVGTVASTNCETRTQTTLEVQKITVQLSSSGEQVEVKKIDYQFFNFQWQKDSNDVPGETRQQFVVSRAGNSESAKYSVRVSYGTIIKTSDEKPVAFTPIPDFEISSADGAKGTVYLCQGGTISLTVAADSFDPNSSVADSFSYVWKKVTSANYTNDTPIGSENPTASVNEIGEYYLEINNGGCPKRAHIQVKNYQVGGLKLSLMRDSQGTAPVKQVYQTSTARERKFDVRIGDRLVAEGGNKFSWTKDDGTVKYGTTLEVTSEDMSGSYTLKEESCVAADENILPFELNIYQVVEVPNVVTPNGDGINDKWEIPSVYLTPKVKVTIYSQEGKEVLSTNNYQNNWPDERTFNDLGKRALIYIYTLKGEITENGETRSVDKKGTITILK
>NC_013162.1|WP_015782581.1|1720693_1725034_+|translocation/assembly-module-TamB
MLLGVTALLLTLPATQTFIAKKVVNYLNEDFDIDLNIERIHLKINGDVDIKRVLIRDHKQDTLISAKKLTTSILDFKQLFDGNLYFGHIKGDSLIFNMKTHKGDTLSNLDVFVNKFDSGEPSTSKFVMKAKSIKLKDSYCRISDENNANPSILKVDHLNTKLNDFKILGSKVFFEMQEGNFRFDDKLNVTHLNTQFSYTDSLMQAKDLRLQTALTDIQGTITMFSHNGSFGDFVNKVVFDVNLPKATVNTTDLNAFYNGFNGGRNIVLEGVTMKGTLNNFTIPQGKISYQNTLIEGDLTFQNLLAKHANIAVIGKGVYAESIYNDLAYLMPKDLGENIPAELQRLGMFSVEGDFAYRTTSLQANVLLKTNDGEAHIDGSLEDLTHTDKTAFRGTLTTNQFHLGKILDDPTMGALTADMTVRGQGLNFKTMQLYANGTVHSVGYNGYNYQRIGINGEFRNQVFNGKIDAKDPNLTMNFNGLADLSGRNNKFDFQADIAIADLHALHFMEMDSVSQFCGKVVIDISGNQLDDIVGKISFKHTNYINSAGSFTFKDFEVVSTLNNGVKEITINSPDIVSGNVRGKFKLAELKKVMQNAVGSIYAQYNPYKIEKSQYVDFHFDIYNKIVEVFVPKVKIGRNTFINGNIDADKGSFKFQMKSPSVNAYGTQIDSISLEIDNKNPLYNTYFEVKKADFGVYAIQDFNLINTTIKDTLFFRTEFKGGDTGRDTYELNFYHTLNKKQQSIIGIKKSLINFKGNAWYINRENAMNEYNKIVLNRTADTIKVSNFKMAHQNQYMNLSGLITTKDYKNLHLVAHNVAMDKIVPEIKGLNLTGTLNGNVSLTQRGNLYYPSADLFIRYFKLNGYDYGDLEVGIFGNSDLSSFDVGAFFSNGRALGFATRGKINLDKKRGTLLDLTAYFRDFELSPFNPFLEGVFYNLRGTMSGQVKIDGSVTDPLMDGELTLHKAGVGITYLKLNTDIQEGARIKVNNKTFDIDNWLLTDTAYKTQAKLNGSIRHNKLLDWFLDLRLQTLGKRFMVLNTPYTDDALFYGTAFIKGNASIKGALDEIAIKVNAKTEEGTSFKIPLSDSESVGDDSFITFVEKGDKKVKINRELESIKGLELNFELDILPTAEVEIVMDRKTGSNLVGRGAGTLLIEINTNGKFNMWGDFITYSGFYNFKYENIIDKRFTVLPGGSISWSGDPLRATLRDLKAAYTLSANPSTLLESSQYNRKINTQVIIKLEGELMRPETLFDITFPDSSPSLVSELNYKLEDQDRKQLQAFSLLAQGSFMSEKNTDNRLVAYNLFETAAGLFNQLLSDEDNKLNLGVSYEAGINDGSSDINSDRLGFTVSTQITDWASVNAKVGIPVGGVSRTAVAGNVEVQFRLNTDGSLTAKIFNRENEWQQYMLDRIGYAQGVGLTYSVDFNTFKGLMQKIFKKGGKVIEPKTEK
>NC_013162.1|WP_015782582.1|1725109_1725757_+|outer-membrane-lipoprotein-carrier-protein-LolA
MRRIFIVAFALFLGVFQAHSQQVDKAKKLLDEVYNKMVAYNNIYIDFKYNLDNIAENINQETKGNVTIAKNKYLLNYLGATKIYDGHKTYTIVPENEEVTIEKNTNDDNAITPSKMLTFYKKGYKYKWDIQQNVRGRKIQYVELKPQKANTDVKQILLGIDIQTKHIYNLIEIGKNGTKTTITVNTFKTNQPISNNIFKFDREKYKKDGYTISEL
>NC_013162.1|WP_015782583.1|1725757_1727245_+|LptF/LptG-family-permease
MKILDRYIITQFLTNFLGALSILVLIFVFHTIFTYIDELAGRGLELWIIFKFLIYFIPQLIPIIMPLAVVIASIMTFGAFAENYEFAAMKASGISLMRVMRPLIILMALLSLGTFFLANNVIPVAYREVYTLRSNIAKVKPAMAIAEGVFSNIGEDISIKVGKKRGDNDEFLENVLIHKKTPDKVNRTVINAKRGELKSSKTNSNFLQLILEDGTYYEDIKTNSYEAQQKEPFAKVYFKKYIINLDLSHLNNVDFNEKTDATTYRMMNVGQLNYAIDSLRTDFKQNITDYGNNMFRRTGFSVAPSTSLSSEVKKQEKPKPAKEITSVRELFNKLNNTQKSMVLDMAINTNQAQLDNVEFRQSDLEYRYKLMNLHILNLSDKFALTVACFVLFFVAAPLGAFIRKGGIGMPLVIAMILFLAYYFIGMFMKNIAENNTINPALAPWIPALILLPLGIYLTTRVTTDKEVFNFPITNKLMRFVEGKVKEIKGKIKKNK
>NC_013162.1|WP_009418633.1|1727512_1728859_+|cytochrome-ubiquinol-oxidase-subunit-I
METEILARVQFALTIAFHYIYPPLSIGLGLLMVAFKGIYLRTGKKEYDTLARFWTRIFSLTFGLGVATGIVMEFEFGTNWATYSRYVGDIFGSALAAEGVFAFALESTCLGIVLFGWNKVKPIWHFLATLGVFLGSMCSAIWIVIANSWQQTPAGYVIAGEGMQAKAVITDFWAMVFNPSSIDRIWHVWQGAFLAGIFLVLSVHAWYLLKGRHVEISKKAFKVTLIIGTIVCLLQLVSGHSSADGVAKNQPEKLAAMEGHFKTGSGDAYIIGWVDKKNEETHGLSIPKGLSYMVHFDGDAPVTGLDQYPVEDRPGQVNAVFQFYHIMVAIGMFLIALTLYASFLLWRGKLYNKRWLLHIFVWSVLLPQIGNQVGWFAAEMGRQPWIVYKLLRTSEALSKSVSANQILFAIILFTVIYIILFALFIYLMNKKIVHGIDEHETQEQLQTA
>NC_013162.1|WP_009751643.1|1728871_1729906_+|cytochrome-d-ubiquinol-oxidase-subunit-II
METFLGIDYPTWWFIIIGFLITGYAILDGFDFGAGAWHLFFDKKKERRVALNAIGPVWDGNEAWLVIGGAGIFAGFPLMYAELFSAMNTPFMLFLTFIIFRAVAIEVRGKEDSDRWRNTWDTVYSVCSIVLPVLLGVVIANVLQGLPLDENFQYTGGALFTFLTPYALLVGVMTLLLFMVHGGLYLLLKTHGDMHHRIEKRINYAYLGFLVVFTAVAIYSMLTPHLAENIANNTALKVFPALLLLSILSVAFFMKKKDYKKAFVGTILTIVFFMVVAALNLHPTFLRTTLETGNSITVYNAAASQKSLKIMLTITAIGAPLLLLYTYFAYKVFWGKVEIDENSY
>NC_013162.1|WP_015782584.1|1730039_1730666_+|50S-ribosomal-protein-L21
MYAIVEIAGQQFKVSKDQKVFVHRLPNQEGEKVAFNNVLLLDNNGTITVGAPAINGASVEAKVLKHLKGDKVLVFKKKRRKGYKVKNGHRQFLTQIVIENIVASGAKTTQAKPKTEKAPVKSAKADDLKKIEGIGPKAAEALVAAGVDTFAKLAKKSVEEIKTILSETSSTLAHLDPQTWAAQAQLAADGKWDELKKWQDELNGGIVK
>NC_013162.1|WP_002670844.1|1730693_1730954_+|50S-ribosomal-protein-L27
MAHKKGVGSSKNGRESHSKRLGVKIFGGQVAIAGNIIVRQRGTQHNAGENVYIGKDHTLHAKIDGIVKFEKKRDNKSFVSVIPLES
>NC_013162.1|WP_015782586.1|1731741_1733223_-|DUF4832-domain-containing-protein
MKKYLLTFFVLLTTIISCQSKEDDVNNGGGTQSPTTKTSTTTSTTTPIPPVTPPAVPSLNQTVRYEGTNEVFLNPERGFLTHQDQGEGDWTLNADWVRQKRNQEGISLILTIYYMNNFREKDIPEYFLNRIRNNMRVIREGGSKVVLRFAYSKDQGDYYNGRGDTSWYWTERHLNQLAPIIRENADIIAVWEAGFVGVWGEWYYTNHYGFEPKENAGDYEARRKVLAKELSILPKDRMVCVRYPMAKIFTQNINVHTNLTEGNAYNGSDLSRIGFHNDCFLADAPNMGTYPNENYRKYMERETQYVVMGGETCTSPNSFTECSNALREMALYHWSYINMDFHEGTINSWKNRCMDDMKRKLGYRFALNYSKFTGNPVPGGRLQIELELKNEGFASPYNRRDVQIVLVRKGTSEKQVFKLNDDPRRWFAGKTVKVKADITLPQHLSKGLYDIYLNLPDPYQSLAHRPEYSIRLANKGIWEAQTGYNKLNTITIQ
>NC_013162.1|WP_015782587.1|1733252_1734836_-|alpha-galactosidase
MKRIFAFITLCSSLWASAQQPTEITLLPNEQWWGGFTGVGKEMPYQPSERIYNLRTENFNNQSVPFLYSNQGRYIASGAPFAYQFKNGKILITPSRGEVSCHTAGTTLKSAYQAVSKQYFPPSGVIPPEVFFTKPQYNTWIELIYNQNEKDVLAYAKAILDNGMPTGVIMIDDNWQKDYGVWQFRPDKFPTPKEMINQLHQMGFKVMVWVCPFVSPDSQEYRFLRDKGYLVKKKGADTPAILDWWNGLSACYDLSNPEAFAYFVNMLKDLQKEYGIDGFKFDAGDPERYLAEDVDVFDQKSYDTEQTYLWGKLGLEFPYNEFRACWKLGGQALVQRLGDKSYSWDGVARLVPDMIAAGLNGYAFACPDMIGGGEYGSFLNVDPTKFNQKLIVRSCQIHSMMPMMQFSVAPWRILSKENLAICIKYAKWHEQLGDYIITEAKKSAQTGEPIVRSMEYAFPHQGFANCKDQYMLGNKYLVAPVMTESDVRTVKLPKGTWQDEQGKKYKGGKAYTLKVPLERLPYFVKIK
>NC_013162.1|WP_015782588.1|1734896_1739027_-|response-regulator
MNRTIKLLRILLLWYFLFPIAFTEELVVRIQAQETFLFHHLTRNEGLLHDNVTCIAQDSLGFIWLGTHRGLNRFDGYTLDAYKYEQDPINSVYYNRVYSLQPMGRYLWVATEAGVACFDIRLKQFVNFKIDDPLDLAFYTKVKLLQKGTNNELWLLSENQIRRAKVVWNQREKALTLKTLPIGSASQLTTSQLNPQIAVSEKGEVWLSGFPWLSAYVPDKGRLKALPEKVNNIGSGIVKMLYADGYLWVIYRDSLVKYACKPDNTYAIVAKKEFELNKHLLSLTLSGQYVWVVNEESIFQLDKNSLSLLKEHSHSPLNPYSASNHINSVFLDKESNLWVSAWSNGVSYSSTRDAFFKTVWIKPQSKVGSEFVSTMHYDPDGYVYIGNKFGGVIRFHTQSQQLDEHYCNAPELSPNVTSIQSDKAHLYVSVRERVWVIDKQSRRIIGSFATQCNDYIFDIKLDTFHRLWITTYSGLECFEEQKGQWQNVYTFTETTPEPRRLSTNKLHKIYVDKAKNELVITSVMGLNRLQLNAKGEVVRVLKYVADAKTPHSLSSNYLWAIDKDKDTYWIGTMGSGLNKVVLTDNANGKLTYTAEHYGIEEGATSNDIESVEVDAFGNVWCGGFYLSFFDTKLKRFAAFSNNDGLQGHSFGTASSCKDAEGNLYFGGSHGFNYFKPQAQMFSSAHLRVHFSRFENNGKVVNSCIEFTDALSIAYPNNDFSVYFTTLSYNAPQRLRYRYKLEDYDTDWHYIAVNAPAPHATYQKLPYGTYKLLVEVGDWQQWSGAQTELTVVSKPPFWLTWWAYTLYALALAGLLYIGFRYFMRWTQMKHTIAVQEEKERHKEELMQMKMQFFTDVSHEFRTPLTLMSHAVTEMEEEMPSNKYVHTLKRNTGKLSNMVNELLEIHRMDVYTPQLKANYISANSYVQAIYNEFKEWASKVAITLQLTLPEQEVKLWLDEKYFSKILSNILSNAIRYSNAGSTIRLSISVENLSELTPLYKNAFENTTHTLPGKQLVVKVQDEGIGLEKNALSEIFERFHRVERQGQKRVGSGIGLSLVKSLVEAHRGGIIISSKPNVGTEVIITFPMDDSYLLPEQKLQDSAFQLKEYLSDYAVEYEHIGEEEDEMLNLPQEDKPTLLLVDDNHEVLMILKNIFIKEYNIILASDGEQAIEKCNQHFPNLVISDVMMPKIDGFELCAILKKNLQTCFIPVILLTAKSQIESQIEGIELGADAYLTKPFDVKLLKTNVRNLLNKSKQHAPIENIRQKVIDKKQQEQLDKLTHLVVTNMQNPHFSVDNLCLELGMNRTKLYSFAKQATELTLANYIRKIRLDKAAELLKTTDKLISEVCYEVGIDSPSYFTRAFKEQFGVSPSEFISGKR

Crispr_ID: NC_013162_12

• CRISPR_ID: NC_013162_12
• CRISPR_location: 1981483-1981661
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_013162_12

Consensus_repeat	Method
GAACGAACAATGAACGAAGAATGAACGAA	CRISPRCasFinder

spacers of NC_013162_12

>12.1|1981512|19|NC_013162|CRISPRCasFinder
CGATGAACGAAGGAAAGAC
>12.2|1981560|22|NC_013162|CRISPRCasFinder
GAGCAAAGAAAGAACGAACAAT
>12.3|1981611|22|NC_013162|CRISPRCasFinder
GAATGAACGAAGAATGAACGAA

CRISPR arrays and Neighbor proteins around NC_013162_12

CRISPR arrays

The CRISPR arrays of NC_013162_12

>merge|NC_013162|12|1981483-1981661|CRISPRCasFinder
AGACAAACGATAAACGAAGAAAAGACGAACGATGAACGAAGGAAAGACGAACGATGAACGAAGGAAAGACGAACAATGAGCAAAGAAAGAACGAACAATGAACGAAGAATGAACGAACAATGAACGAAGAATGAACGAAGAATGAACGAAGAATGAACGAAGAATGAACGAAGAATGAA

>NC_013162|12|11|1981483-1981661|CRISPRCasFinder
AGACAAACGATAAACGAAGAAAAGACGAA	CGATGAACGAAGGAAAGAC
GAACGATGAACGAAGGAAAGACGAACAAT	GAGCAAAGAAAGAACGAACAAT
GAACGAAGAATGAACGAACAATGAACGAA	GAATGAACGAAGAATGAACGAA
GAATGAACGAAGAATGAACGAAGAATGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_009421560.1|1984478_1985438_-|D-2-hydroxyacid-dehydrogenase	unknown	unknown	gnl|CDD|240628
NC_013162.1|WP_015782727.1|1981688_1983572_-|hypothetical-protein	unknown	unknown	gnl|CDD|225387
NC_013162.1|WP_143713230.1|1989217_1989697_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782728.1|1983568_1984003_-|nucleoside-deaminase	unknown	unknown	gnl|CDD|223663
NC_013162.1|WP_015782722.1|1973485_1974124_-|NAD(P)H-binding-protein	unknown	unknown	gnl|CDD|187560
NC_013162.1|WP_015782723.1|1975905_1976253_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_009418379.1|1976894_1977479_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|239645
NC_013162.1|WP_009418310.1|1974255_1975830_+|Na+/H+-antiporter	unknown	unknown	gnl|CDD|129911
NC_013162.1|WP_015782720.1|1971251_1972331_-|histidine-kinase	unknown	unknown	gnl|CDD|225814
NC_013162.1|WP_015782721.1|1972380_1973322_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782731.1|1987107_1988667_+|hypothetical-protein	unknown	unknown	gnl|CDD|240291
NC_013162.1|WP_015782725.1|1978144_1978864_+|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl|CDD|274948
NC_013162.1|WP_009418270.1|1985488_1986172_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|225438
NC_013162.1|WP_041546797.1|1988656_1989148_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782724.1|1977484_1978126_+|orotate-phosphoribosyltransferase	unknown	unknown	gnl|CDD|234771
NC_013162.1|WP_009410800.1|1991452_1992415_+|KpsF/GutQ-family-sugar-phosphate-isomerase	unknown	unknown	gnl|CDD|182814
NC_013162.1|WP_002671325.1|1980878_1981250_-|ribosome-silencing-factor	unknown	unknown	gnl|CDD|376779
NC_013162.1|WP_041546799.1|1989767_1990691_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782726.1|1978915_1980874_-|ATP-dependent-zinc-metalloprotease-FtsH	unknown	unknown	gnl|CDD|273520
NC_013162.1|WP_015782729.1|1984075_1984471_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_009418270.1|1985488_1986172_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	1.03007e-84
NC_013162.1|WP_015782727.1|1981688_1983572_-|hypothetical-protein	gnl|CDD|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	3.73871e-05
NC_013162.1|WP_009421560.1|1984478_1985438_-|D-2-hydroxyacid-dehydrogenase	gnl|CDD|240628	cd05303, PGDH_2, Phosphoglycerate dehydrogenase (PGDH) NAD-binding and catalytic domains. Phosphoglycerate dehydrogenase (PGDH) catalyzes the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDH comes in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases. PGDH in E. coli and Mycobacterium tuberculosis form tetramers, with subunits containing a Rossmann-fold NAD binding domain. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence.	2.19524e-142
NC_013162.1|WP_009418310.1|1974255_1975830_+|Na+/H+-antiporter	gnl|CDD|129911	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309., Na+/H+ antiporter, bacterial form. The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds].	1.98873e-86
NC_013162.1|WP_009418379.1|1976894_1977479_-|NUDIX-domain-containing-protein	gnl|CDD|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	3.95594e-27
NC_013162.1|WP_015782728.1|1983568_1984003_-|nucleoside-deaminase	gnl|CDD|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	1.75741e-49
NC_013162.1|WP_015782720.1|1971251_1972331_-|histidine-kinase	gnl|CDD|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	7.4895e-32
NC_013162.1|WP_009410800.1|1991452_1992415_+|KpsF/GutQ-family-sugar-phosphate-isomerase	gnl|CDD|182814	PRK10892, PRK10892, arabinose-5-phosphate isomerase KdsD.	4.89328e-98
NC_013162.1|WP_015782731.1|1987107_1988667_+|hypothetical-protein	gnl|CDD|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	0.00367002
NC_013162.1|WP_015782725.1|1978144_1978864_+|carboxypeptidase-like-regulatory-domain-containing-protein	gnl|CDD|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	1.68341e-12
NC_013162.1|WP_015782724.1|1977484_1978126_+|orotate-phosphoribosyltransferase	gnl|CDD|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	6.88129e-72
NC_013162.1|WP_002671325.1|1980878_1981250_-|ribosome-silencing-factor	gnl|CDD|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	1.13443e-38
NC_013162.1|WP_015782726.1|1978915_1980874_-|ATP-dependent-zinc-metalloprotease-FtsH	gnl|CDD|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NC_013162.1|WP_015782722.1|1973485_1974124_-|NAD(P)H-binding-protein	gnl|CDD|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.96956e-62

Protein sequences

>NC_013162.1|WP_002671325.1|1980878_1981250_-|ribosome-silencing-factor
MNKEISSNQLISNIIAGIEKVKGTDITIMDLREVENTVCDYFILCNGSSNTQVSAISGAIQKVVSQAEGHQHPWHVEGEANAEWVLIDYVDVVVHIFQTKIREHYDLEGLWGDAKIINLETNY
>NC_013162.1|WP_015782726.1|1978915_1980874_-|ATP-dependent-zinc-metalloprotease-FtsH
MSDNKSNGSRFSAYWLYAILLLILIGFNYYSGASFWSQPKEIPQSKFEEYLSNGDVSKIIILNRKEANVYLTPDALKKEEHKEVKPTGNTFMQGANAGEVPQYRFELGDLSNFENRFDQIVKDNNLSTTRENKTEQNIFGDLLFSILPFIVIIGLWIYIMRRMAGGGGAGGIFSIGKSKARVFDEKKETRVTFQDVAGLEGAKEEVQEIVDFLKNPDKYTSLGGKIPRGALLVGPPGTGKTLLAKAVAGEAQVPFFSLSGSDFVEMFVGVGASRVRDLFKQAKEKSPCIIFIDEIDAIGRARGKNVMTGANDERENTLNQLLTEMDGFGSHTNVIVLAATNRADILDKALMRAGRFDRQIYVELPNLNERKQIFEVHLRPIKTAETLDIDFLAKQTPGFSGADIANVCNEAALIAARKGKTAVSKQEFLDAVDRIVGGLEKKTKILTPEERKTIAFHEAGHATVSWLLEHAAPLVKVTIVPRGQSLGAAWYLPEERQIVRTEQILDEMCAALGGRAAEKVIFDKISTGALSDLEKVTKQARAMVTIYGLNDKIGNLTYYDSAQSDYSFTKPYSEKTAHLIDEEISKIIEEQYQRAIDILTENKDKLTTLANLLLEREVIFREDLENIFGKRKFKDPHDIIEEEEDKSSEVVS
>NC_013162.1|WP_015782725.1|1978144_1978864_+|carboxypeptidase-like-regulatory-domain-containing-protein
MKYLTIIWLFFSVGVFAQKQVRGRVVRDTIPLSGAHVMNLYTNAVTTTDANGYFTLKASERNTLQITFVGMQTVYRALTKADFGFGGVLIQMKEQVNQLDEVEVSKYQGVSAQRLGILQHTPVERTFAEKRLYSATHSAGGNLLSIDLLINTISGRKKLLKKIVANEQNLAVANYIRENMKVFLQKELKLNEEEIDVLAYYVMERTEFHDLVRKKENKQMEFMLIEAWGEYQRLAKAEK
>NC_013162.1|WP_015782724.1|1977484_1978126_+|orotate-phosphoribosyltransferase
MILDSITAQNTAEFLLQINAIKLNSENYFTWASGWKSPIYCDNRIILSFPEVRSYFASVLARGVKEKFPEVQVIAGVATGAIGIGMLVANALELPFVYVRPEPKKHGRQNQIEGFLRPEQKVVVVEDLISTGMSSLNAVKALRDSGAEVLGMVALFSYNFDVANERFTEEKVPLYTAGDYDSLLEKALLFGRIKKEDLEMLQQWRKSPDTWKQ
>NC_013162.1|WP_009418379.1|1976894_1977479_-|NUDIX-domain-containing-protein
MYEIFLDEKSIILTNVRENIENVKCFSIKDITLDVILEELKRKEVEKIYLYHPKEEKLMKKFKQLIPTIKAGGGIVYNQEGKVLMIKRHGKWDLPKGKKEKGENIATCALREVEEETGVKKLLIQRFRMITYHIFKRDGQYFLKETYWYDMTTTFKKKLVPQTEEDIEKACWKDEAEVRELVKDSYKNIQKLFN
>NC_013162.1|WP_015782723.1|1975905_1976253_-|hypothetical-protein
MTSDEFAKNFYIEKLEFLKSCFQVQPDYPSAVNTKIKEMALSSTQKEQLEAVIDLLLNDVFYSVLLGLDGECPIGNIQQVYSIYDEEGCLISDCGELEVSAYEYFHGGKYEKETD
>NC_013162.1|WP_009418310.1|1974255_1975830_+|Na+/H+-antiporter
MVQYFPYLLLLMVAIMLLIMLANRLKVAYPILLVLGGLAISFIPNVPTITLNPDLVLIIFLPPLLYADVFSLSLKEMWKWRRIIFSFAFIVVFITAAAVAWVANMVFPGFSLALGFLLGGVIGSTDAVSASSIMKFVKVPKRISTIIESESLLNDASSLIVFRFAALVVTTGQLVWTDMALNFLWVVIGGTLIGLAVAWVMRKLHRFLPTDANMDIILTLIAPYIMYIVANEVGASGVLAVVAGGMYMSFHLTSILAASTRNKGVAVWDILGFVLNGLAFMLIGLALPEVLIGIEAEGMSLATATNYGLLITGVVVGVRLLSSYGAILITQVMKHFITVADRRNPGFRVPLVLGWAGMRGVLSLAVALSIPLTLENGEPFPHRNLILYITFIVILVTLLVQGLSLPALIRWAKFPDYEDHIPEAEAESLIRKSLAQAALDYMQEHYKEGITDSFLLQNQKDIWQYQLDLPKSNTTPEVRKKYIAILHHQREILHQLNKNPRIDEEQIRNFHRQLNLEEEKWEMN
>NC_013162.1|WP_015782722.1|1973485_1974124_-|NAD(P)H-binding-protein
MKALIIGATGATGKDLVTQLLADDTYSEIHSFVRKPMSISHPKLHAHVVDFDTPEAWSDLLHGDVAFSCLGTTLAVAGSKEAQWRVDYDYQYAFAQQCKANGVPTFVLVSAAGATAQSKLFYNRMKGALEEAVKKLNFPRLLIFQPSILIRSNSDRSGENFTVKAFNFLNKLGILKRYRPMPTQILAEKILSAIHNSPKGTFTFALDKIFEI
>NC_013162.1|WP_015782721.1|1972380_1973322_-|hypothetical-protein
MKETITFIALLFVASVSAQISVKAEYISNSEFYDAVSDSNIGDGSAMIYSVGAMVPLSMQAPEEDDPYQRPTVWGVGLNGTFVKMNNHDFPIGKELPSEVMNLGVSAIHLRPLKTRWSMLIALGAGSYTPENRLSSIHIGENVLANGALVFVWHWHRNLEIGGGVALNNSFGYPMVFPAFYFKYNGAFSDKFTIEVGSIDGIKVALGYNYRENLDFKLIANMGGYSAYLRRNGEKEIFSQQTFVVGLQPEFKIGKHVSIPLTVGGSFIRSGRYRERKLSAMFASEAKNEDGSSRSSQFNPAFYLSAGITIGGN
>NC_013162.1|WP_015782720.1|1971251_1972331_-|histidine-kinase
MDENPYIFLKNNLFLQFLIADRYCIYRHITACVSLLLFFLITKEWGAYKGFVDHLDWIERCMIITVAFYLNIYVLIPRFLFRGKLVTYTFSLIGILFICQVITYYLNAVIWREYIISEDLKKAMALPIPTLFIFSLLSLLPFIMLSTLIKIFQLWIKSTEKMQELEQQAAKSELQALRSQIQPHFLFNMLNSINTLLYIDPEKASYTITKLSDFLRHLLYQSHEERVFLSSELRFLTDFLSLEAMRRDDFTYEITYNEKNIQGIQLPPNILLILAENAVKHSIDALAPTYIYMKCEQKEGWLHFFVRNSVPLQPNPQQKFSGIGLNNLRRRLELLYGERFSLPQERLPQEYIVTLALQL
>NC_013162.1|WP_015782727.1|1981688_1983572_-|hypothetical-protein
MRKTFTLIALFLLGMNYLLSQEIDTLRVKDSVLGGISPEREAKNRVFYERIKNFFSKYKLTKNLNNLIVIEEKATGRTLTPTAIVTTTVTHIKAPSYQGKIIRNIVITTLDPFGFDEKDLNKVPNTRLERLGNALHVKTRESTVRKFLLFKKDKPLDTLLLSETERVLRNQRYIRRAQVCAIPVSQTSDSVDVQVNVLDSWSIYVDGDLAGSRGWTRLTEQNLFGIGHELSLTYQQYFSGIGNNGKGFNYVVRNIKNTYINVRTGYYSDYENYFSKSIQVERPLYSPLARWSGRLGYYEYRYEDEGISYRDSIYIPILMTRTFDAFGSWVKPLRKVENKRINNFIIAGRFRNINYYEKPSPEIDPEQYYGNENLYLTQFSLNSTGFIKDRYIFRNGDIEDVGIGRSLFLTSGILRKNYATLSYLGIGFAEANYTKRGYHSINFEVGTFFKDGTNKETVLKGEGTYFSKLFDIGDWHFRQFLRSSFVVGFNRNVYQRDRINLNESNGILGFSSREVYGTRKLILTSQTQVYAPFQLIGFRFSPFLSADIGFIGRENTAFLKTEVYSKVSIGFYISNDYFPFGAIQFSFGYYPNIPGTGNNIFKFTGVTNDDFRLHSFSQRLPNIVSFR
>NC_013162.1|WP_015782728.1|1983568_1984003_-|nucleoside-deaminase
MNTDEYFMQKALEEAQLAFEEDEIPVGAIITIDNRIIAKAHNLTERLNDVTAHAEMQAITMAAHYLGGKYLIGCTMYLTLEPCAMCAGALYWSQLSRLVYAAPDTHRGYSVMGGKLHPKTEVVTGILSQEATTLLKQFFQQKRK
>NC_013162.1|WP_015782729.1|1984075_1984471_-|hypothetical-protein
MAGMLDFLGGDNLQQLVKGLSEKTGIGSDKVSSVMDSLKSMLGKAEGSEILNKLTGDGQSSTLKAISEKTGVSLDNVSKIFQNLTPMISNFFSGKGGNISEMINSFFDKNKDGNVMDDIMGGIGNLFGGNK
>NC_013162.1|WP_009421560.1|1984478_1985438_-|D-2-hydroxyacid-dehydrogenase
MAIKILANDGISDSGKEALEKEGFEVITTKVAQNQLIDYINKHAIDVLLVRSATQVRKDIIDSCPSLKLIGRGGVGMDNIDVAHAKSKNLHVINTPASSANSVAELVFAHLFSGVRFLHDANRNMPLEGDTQFNELKKNYNNGAELRGKTIGIIGFGRSGQAVARIAIGLGMNVMAYDPKVTEAVITLDFFDGQTLPFTIKTVEKEHLLAKADFITLNNSPAEGGYILDAKEFALMKDGVGVINLARGGALNEVALIEALDSGKVAFAGLDVFENEPNPAIQVLMHPQVSLTPHIGAATNEAQNRIGFELASQIITLFK
>NC_013162.1|WP_009418270.1|1985488_1986172_-|ATP-binding-cassette-domain-containing-protein
MEEPVLDLKEVSVYQKNTLILSNVNLTIGKGELVYLIGKTGSGKSSLIKLLYGDLPLTKGQGKVVGFNLNKLTEDEIPLLRRKLGVVFQDFKLLTDRSVHDNLAFVLKATGWTDKAKIQQRIEEVLAKVKMQNTGFKFPHELSGGEQQRIAIARALLNNPELILADEPTGNLDPETSVEVMQVLKEINASGRTILMATHDYALILKFPSKTLKCDGERIFEVVQRRV
>NC_013162.1|WP_015782731.1|1987107_1988667_+|hypothetical-protein
MSHKIIKFGMLALVALALTYCQREDAPEAPQQAPVPAVDPQAVVSLNEAKSLFEASENQKRTANSVSRRKYPFIELETDWRYFLQTQTLAGDAYAKIPITIIGSDLSAEMLFLKEDGVTEPYLFITEPDSLTQDNRIVNADFYLFTPKGEFISAYRMTDGVISHQLVPKVKANYRLVVDAEAAQAGRKKPKKMKGAPASIRVEAKTEDSGGLDNESGGTGGGGSGSAGGGTGGGIGGGGVAGGDAPIQLETVNVYGTRPVHYGSYPTYSGNSYGNFTKGKDPKPNEDGIGGGNGGSSSSDVGVGIVKGGKKSKNMRTIDDEEKEEKEGAPVLDRPDDPIYDNKCFFSTVDLNKGATLTIYVDEPNPGTGNIKNWTNVGHTFIGITQGEKQYTYGFYPNVPGHKTISNNNVDSVLGKDDRHSFSVSFSAEISPEQLQKIIELSEKSYDRQYNLSYSNCTDFAISVANLANITLPYCKGIWTGGGGSAPGILGKALRDSSTFKNKINTRGGKAPASKGNGC
>NC_013162.1|WP_041546797.1|1988656_1989148_+|hypothetical-protein
MVANMKQLLYLILVLPLLAMTPPNKEARQRKVVEEYVHILLNTEDDAIRAISNNEDIVKFTSLLKLTRAYTKDEIDNAIDFLLYVKRTLQGHKYKILNFKEANKKLKREGGAIASDKGDVYYIDIDGDGVFFQAAVVVDDDYKIISIAIGMCDHPQRLCFLYL
>NC_013162.1|WP_143713230.1|1989217_1989697_+|hypothetical-protein
MKQLLYLILILPLLAMTPPNKEAKQRKVVEAYVHTLLNTDEEILNIYENEDIQQIFPSFKLTRTYTKKEIDEIKESLLYIKQILQGHRYKILNFKEADKKLKTEGGAVASDRGDVYYIYDKDLKGVFFQAAVVVDDDNKIISIAIGMCFNPKRLCFLYL
>NC_013162.1|WP_041546799.1|1989767_1990691_+|hypothetical-protein
MKQLLYLLLFCSCAVMAQEQKYILLDSLTANFKIKHYTLDTSPYGPRRTIEMYNVFFSNYGLNKGEDYIMLFSILPDLSSKTDWEEIDFRKIENNLFPVKKIFTRAIYKVFSVPEKFSFSLKKEDDISGVRLVKKVKDKYYVGKIIRIDDFYCIEVSREIQLATKNFILNTNQPIVPINVLKQKYKEFKPFQQFYLDDIFVIPDILEGVYLSNIEEKWEDTMYFFYQYSYYDNRGIDELVYIKDKGIVAGAYGDYFYPIGKIDRTGTKRSDWDKVIHGAKNRLLWAEELKKEWKDKEKEVENWKKGK
>NC_013162.1|WP_009410800.1|1991452_1992415_+|KpsF/GutQ-family-sugar-phosphate-isomerase
MKTEEIITIAKQTISEEAQAVAKLVDYIDDDFTKSMEYILQSKGRVVITGIGKSAIIANKIVATMNSTGTPAIFMHAADAIHGDLGIIQQDDVVICISKSGNTPEIKVLVPLLKRGNNKLIAITSNRNSVLAQQADSVLYAHVEKEACPNNLAPTTSTTAQLVLGDALAVCLLEMKHFGSSDFAKYHPGGALGKRLYLKVADIVVHNQKPEVAPDTDIKKVIVEISEKMLGVAAVIDNGRIVGVVTDGDIRRMLSKTDSIKGLVAKDIMSANPKTIDLESLAIDALHLMEKNKITQLLVTREGQYEGIIHLHNLIQEGLI

Crispr_ID: NC_013162_13

• CRISPR_ID: NC_013162_13
• CRISPR_location: 2108495-2108694
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers

Consensus repeat of NC_013162_13

Consensus_repeat	Method
AACAAAAGACGAACAAAAGACGAA	CRISPRCasFinder

spacers of NC_013162_13

>13.1|2108519|20|NC_013162|CRISPRCasFinder
CAATGAACGAACAATGAACG
>13.2|2108563|20|NC_013162|CRISPRCasFinder
CAAAAGACGAACAAAAGACG
>13.3|2108607|20|NC_013162|CRISPRCasFinder
GCGAGCCGCACGGGCAGATA
>13.4|2108651|20|NC_013162|CRISPRCasFinder
GAAAGGACGAAGAAAGGACG

CRISPR arrays and Neighbor proteins around NC_013162_13

CRISPR arrays

The CRISPR arrays of NC_013162_13

>merge|NC_013162|13|2108495-2108694|CRISPRCasFinder
ATAAAGAGATGAACAAAAGACGAACAATGAACGAACAATGAACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACAAACAAAAGACGGTGCGAGCCGCACGGGCAGATAAACAAAAGACGAAGAAAAGACGAAGAAAGGACGAAGAAAGGACGAAGAAAGGACGAAGAAAAGACAAA

>NC_013162|13|12|2108495-2108694|CRISPRCasFinder
ATAAAGAGATGAACAAAAGACGAA	CAATGAACGAACAATGAACG
AACAAAAGACGAACAAAAGACGAA	CAAAAGACGAACAAAAGACG
AACAAAAGACAAACAAAAGACGGT	GCGAGCCGCACGGGCAGATA
AACAAAAGACGAAGAAAAGACGAA	GAAAGGACGAAGAAAGGACG
AAGAAAGGACGAAGAAAAGACAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_041546810.1|2097474_2100189_+|cytochrome-c-biogenesis-protein-CcsA	unknown	unknown	gnl|CDD|274447
NC_013162.1|WP_015782825.1|2117487_2119137_+|transcription-termination-factor-Rho	unknown	unknown	gnl|CDD|236490
NC_013162.1|WP_015782810.1|2101605_2102337_+|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|213022
NC_013162.1|WP_015782817.1|2108809_2109169_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782813.1|2103553_2103922_+|3-hydroxyacyl-ACP-dehydratase	unknown	unknown	gnl|CDD|238275
NC_013162.1|WP_002671609.1|2115105_2115831_+|DUF4369-domain-containing-protein	unknown	unknown	gnl|CDD|379543
NC_013162.1|WP_015782826.1|2119636_2120536_+|lipoyl-synthase	unknown	unknown	gnl|CDD|235493
NC_013162.1|WP_015782822.1|2113700_2114780_+|isochorismate-synthase	unknown	unknown	gnl|CDD|273127
NC_013162.1|WP_015782818.1|2109199_2110507_+|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	unknown	unknown	gnl|CDD|223694
NC_013162.1|WP_015782807.1|2096219_2097137_+|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	unknown	unknown	gnl|CDD|234858
NC_013162.1|WP_015782823.1|2115854_2116811_-|acyltransferase-family-protein	unknown	unknown	gnl|CDD|226122
NC_013162.1|WP_015782820.1|2111228_2111858_+|trimeric-intracellular-cation-channel-family-protein	unknown	unknown	gnl|CDD|225415
NC_013162.1|WP_015782811.1|2102333_2102948_+|outer-membrane-lipoprotein-carrier-protein-LolA	unknown	unknown	gnl|CDD|319983
NC_013162.1|WP_015782819.1|2110527_2111181_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782821.1|2111926_2113672_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NC_013162.1|WP_015782809.1|2100277_2101240_+|beta-ketoacyl-synthase-chain-length-factor	unknown	unknown	gnl|CDD|238430
NC_013162.1|WP_015782816.1|2106207_2108373_-|S46-family-peptidase	unknown	unknown	gnl|CDD|371067
NC_013162.1|WP_015782812.1|2102925_2103537_+|DUF3261-domain-containing-protein	unknown	unknown	unknown
NC_013162.1|WP_015782815.1|2104766_2106155_-|MATE-family-efflux-transporter	unknown	unknown	gnl|CDD|240536
NC_013162.1|WP_015782814.1|2104062_2104671_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_041546810.1|2097474_2100189_+|cytochrome-c-biogenesis-protein-CcsA	gnl|CDD|274447	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB. Members of this protein family represent one of two essential proteins of system II for c-type cytochrome biogenesis. Additional proteins tend to be part of the system but can be replaced by chemical reductants such as dithiothreitol. This protein is designated CcsB in Bordetella pertussis and some other bacteria, resC in Bacillus (where there is additional N-terminal sequence), and CcsA in chloroplast. We use the CcsB designation here. Member sequences show regions of strong sequence conservation and variable-length, poorly conserved regions in between; sparsely filled columns were removed from the seed alignment prior to model construction. [Energy metabolism, Electron transport, Protein fate, Protein modification and repair].	6.91104e-60
NC_013162.1|WP_015782825.1|2117487_2119137_+|transcription-termination-factor-Rho	gnl|CDD|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NC_013162.1|WP_015782810.1|2101605_2102337_+|polysaccharide-deacetylase-family-protein	gnl|CDD|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	7.1714e-64
NC_013162.1|WP_015782822.1|2113700_2114780_+|isochorismate-synthase	gnl|CDD|273127	TIGR00543, Salicylate_biosynthesis_isochorismate_synthase, isochorismate synthases. This enzyme interconverts chorismate and isochorismate. In E. coli, different loci encode isochorismate synthases for the pathways of menaquinone biosynthesis and enterobactin biosynthesis (via salicilate) and fail to complement each other. Among isochorismate synthases, the N-terminal domain is poorly conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	5.74202e-79
NC_013162.1|WP_015782820.1|2111228_2111858_+|trimeric-intracellular-cation-channel-family-protein	gnl|CDD|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	3.47634e-66
NC_013162.1|WP_002671609.1|2115105_2115831_+|DUF4369-domain-containing-protein	gnl|CDD|379543	pfam14289, DUF4369, Domain of unknown function (DUF4369). This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with pfam00578.	3.83823e-15
NC_013162.1|WP_015782826.1|2119636_2120536_+|lipoyl-synthase	gnl|CDD|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
NC_013162.1|WP_015782823.1|2115854_2116811_-|acyltransferase-family-protein	gnl|CDD|226122	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism].	2.79535e-15
NC_013162.1|WP_015782818.1|2109199_2110507_+|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	gnl|CDD|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	6.9987e-142
NC_013162.1|WP_015782807.1|2096219_2097137_+|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	gnl|CDD|234858	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional.	4.38444e-100
NC_013162.1|WP_015782813.1|2103553_2103922_+|3-hydroxyacyl-ACP-dehydratase	gnl|CDD|238275	cd00493, FabA_FabZ, FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.	4.40209e-08
NC_013162.1|WP_015782811.1|2102333_2102948_+|outer-membrane-lipoprotein-carrier-protein-LolA	gnl|CDD|319983	cd16325, LolA, LolA, a periplasmic chaperone. This family contains periplasmic molecular chaperone LolA which binds to outer-membrane specific lipoproteins and transports them from inner membrane to outer membrane (OM) through LolB, a lipoprotein anchored to outer membranes. There are five Lol proteins (LolA, LolB, LolC, LolD, and LolE) involved in the sorting and membrane localization of lipoprotein and are highly conserved in Gram-negative bacteria. LolA accepts OM-specific lipoproteins that are released from the inner membrane by the LolCDE complex and transfers them to the OM receptor LolB. Studies have shown that hydrophobic surface patches large enough to accommodate acyl chains of the OM lipoproteins and the structural flexibility of LolA are important factors for its role as a periplasmic chaperone.	1.11201e-23
NC_013162.1|WP_015782821.1|2111926_2113672_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.3362e-151
NC_013162.1|WP_015782809.1|2100277_2101240_+|beta-ketoacyl-synthase-chain-length-factor	gnl|CDD|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	3.21747e-13
NC_013162.1|WP_015782816.1|2106207_2108373_-|S46-family-peptidase	gnl|CDD|371067	pfam10459, Peptidase_S46, Peptidase S46. Dipeptidyl-peptidase 7 (DPP-7) is the best characterized member of this family. It is a serine peptidase that is located on the cell surface and is predicted to have two N-terminal transmembrane domains.	0
NC_013162.1|WP_015782815.1|2104766_2106155_-|MATE-family-efflux-transporter	gnl|CDD|240536	cd13131, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Vibrio cholerae NorM. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Vibrio cholerae NorM and functions most likely as a multidrug efflux pump, removing xenobiotics from the interior of the cell. The pump utilizes a cation gradient across the membrane to facilitate the export process. NorM appears to bind monovalent cations in an outward-facing conformation and may subsequently cycle through an inward-facing and outward-facing conformation to capture and release its substrate.	1.55464e-127

Protein sequences

>NC_013162.1|WP_015782816.1|2106207_2108373_-|S46-family-peptidase
MKKISLILLAFLLLTPIAKADEGMWFLMFIERLNQRDMQKLGLQLTAQEIYSINNNSLKDAIVQFNGGCTASIISKDGLVLTNHHCGYGNIAQLSTPENNHLKNGFWARSHAEELSPKQSFVRFFVRMDNVTDRMLSVVKPSMNEKEREAALNQEMAKIQKENSEGGKYVVSVRPFFQGNEYYYFVYQDFKDVRLVGTPPESIGKFGGDTDNWEWPRQTGDFSLFRVYTDKDGNAADYSPNNVPLKAKRYLKVSLKGVQDKDFAMIMGYPGRTNRWESSYWVDQNVKYAYPAWVEASKTAMDAMKRFMDKDDAVRLQYASQYSSIANYWKNRQGMIDALTAHKTAATKRKTEAIFAKWANKAENKAEYGDVLNTLSNFFEKTNAKSADENYLGMLWRASFFVKIPTRYISLVSNAKKGGMPTDELEKRVDDLLTEYDKVNLDVEKAILADMLKLYTNKGTDVPSELKTIKTQYKGDFNKYVEELLAKSIYRSKETAKEGVFPKNKVFQNEKQINMALASDPILALSIALFVNYRNPSEEQLSLEDSYAKAFRKFIKGMRDSKISTILYPDANSTLRLTYGTVIPLAADKRNPDVKKNYYTTFNTLMAKYKKGDAEFDMPQRMLDLYKKKEFGRYIDKDGSMHVNFLTNNDITGGNSGSPVMNGKGELIGLAFDGNIEAMAGDVIFDKQLQRTINVDIRYVLWVIDIYAGAKNIINEIETVQ
>NC_013162.1|WP_015782815.1|2104766_2106155_-|MATE-family-efflux-transporter
MSLSSYTKEFKYNFKIAYPIILGMLGHTLVGFVDNVMVGKVGITELGAAALGNTAIFIAMSFAIGFSVASTSLVAMADEAGDKPTAQSILNHGMVLNVILGVVLFLLLFFVEPVMRYTGQSEKVIELAVPYTHLVAFSLIPLGVFTTFKQFADGLSMTKYAMYVTILANLLNVFLNYLFIYGNWGCPKLGVLGAGIGTLVSRIVMPIMLFFMLKNLEKSREYVMSISFKNMQQAMYKKITALGLPTAMQMIFETGIFTAAIWISGMLGENHLSANQIALNLSSMTFMVANGLGITAMIRVGNQLGARNYANLRRVAISVFLLVLCTQVFFALLLAVFRTWLPSLYLEMDNIEKLANNTLVIGEATNLLLIAAIFQISDGMQVTALGALRGVQDAKVPMYITFVAYWLIAFPILYVLGVHTNLGTMGIWIGLLTGLTVAAVCLLYRFNRISLQLIANRHQYTS
>NC_013162.1|WP_015782814.1|2104062_2104671_+|hypothetical-protein
MEKELKNFTEKSYEKLKNAIQEIANEEDKKEVYVLSFCCTCDDDDLRFPKITLGYNTLSNVKEESYNATSKEDAKWNFDYWLQTEVETVGGKKDKLLKQWFAKTPYFYSDEENDRAIEEDEDLYDKLLKKGDKFGKDFIKEVIALAKRLLDDGELEKVFGRNIPIIIHQRDFEDTPISWTKKANPAKLIKEFLEYWDGEEED
>NC_013162.1|WP_015782813.1|2103553_2103922_+|3-hydroxyacyl-ACP-dehydratase
MLKEFYTLNSLKKQDAENYLCTLTLNPQHAIFKGHFPGNPITPGVCMMQIIKNLTEEITGHKLFLAKTTNVKFMALINPITHPILQLTLAIQHKDADIQVKNTTSFDETVALKLTNLYKIVS
>NC_013162.1|WP_015782812.1|2102925_2103537_+|DUF3261-domain-containing-protein
MKQILKCSLFAILLSLSSCSPSYKLPTEYQLVATNKTIITNPHIRVGEEYLYRATITAYGHTFSGLLAAKIAADNTWRVALTTDFGNTLFDFENQKGKIKTNYVIPSLNKKIIIRTLTTDFKHLLKTHWQVTQKYTNGTIEVQQSKDGNDAVYLFTSGTNLFKQLNMQGKKLYTTFTYNTNNITIEHHSFTIKIVLEPLIINH
>NC_013162.1|WP_015782811.1|2102333_2102948_+|outer-membrane-lipoprotein-carrier-protein-LolA
MKKLLIFLISVAPLTISAQALTEVQIRDFKTQTIAKNKVIQTMQADFIQKKHLDFMSKDIETFGKMAFAKPDKLNWQYTKPYQYRIVFQKDKITVNDAGNISQMKADNKVFKKINNLIVSSISGDMFNEKEFAMTFAKSGKSILVKLLPKDKTLLKYVSEIHLYFDVDSVVERVKLIEPSKDYAEILFSNKKLNTKIDEANFKM
>NC_013162.1|WP_015782810.1|2101605_2102337_+|polysaccharide-deacetylase-family-protein
MNKHLFIIAIFVATLVTAFIQNAPWWVYVLLIVLFLGITSWGVFDIRLSYFVKTQYFLKGRPAKTIALTFDDGPSELTPQFLDLLQQYNAKAVFFCVGEQIQKYPEVVKRMQAEGHLVANHTFTHQPKNILHAKAFANEIRHTDEALAHLDIVTPYFRPPYGITSPPVARAIRATAKKTIGWDIRSLDTVIHNEDKLFHRIVRKLTNGNIILMHDRLPHTLNVLERLLQYLKENNYTITNNLE
>NC_013162.1|WP_015782809.1|2100277_2101240_+|beta-ketoacyl-synthase-chain-length-factor
MKSYINGIACISAQTTFLTPHFLNEALKVTPEEVSYAQEPSYKEYIAPNASRRMAKGVKMAIATAAEALKEAHITTPDAILVGTGMGCLQDSEKFLRALINDNEEHLTPTAFIQSTHNTVAGQIALLLHCKGENFTYVNGAVSFESALLDAKMQMEQNTINTALVGGVDEHSPHTLYLYDLVGLDQKGEGASFFALSAEATPNTYGELVDVALYNELTSEQQQTALNDFLSRHHLSLSNIDLILTGEVENRSWQRPTLHYKTLSSEYYTASAFGLWFACQVLQKQTLPAICELALPTPIQHILLVNSYRGKDFSFVLLKK
>NC_013162.1|WP_041546810.1|2097474_2100189_+|cytochrome-c-biogenesis-protein-CcsA
MKLRRFISFFYSTKLMAILFIAFAIAMAVGTFVENSYDTDTARIWVYNTWWFEAIMGLFVVNFIGNIPRYRLLKKENWAVLVLHLSWVFIIIGAGVTRYFGNEGMISLREGETTNTYLSDRTYITAMVDGNYQGALLRKKKQKEALFSPYTSNHYKWSSDFKGKPFSITYKSFKRIGKEMNALVLEVVSGNQRKEVIVMGKRGVQHPPTSIDLNGLQFHLSYGAREEKLPFSLTLNDFIAEKYPGTENSYASFKSKVTVSGGGESFPYDIEMNHILNYQGYRLFQSSFHPDEQGTILSVNRDFWGTLITYVGYILLFGSLLAFMFVGKSRFRKLNQQLKDLQAKRFAIVLALCFGSLATAQTPMVVPNKAHAEKFGAMLIQDDGRFKPVNTFSSELLRKLSKHDTYKGLTSDQVLLSMFLSPQAWYESDIIYVKKANDSLHRFLGVPEGTKWVKPKDFFDAKGQYKLAPLLKDIYNTNTPNQFQKDFKEVDQRIGLLNRALQGDIFKVFPVPNDPNYKWISHLDYINDTLQITDPLYKQFVKNALPAYLILLQQATETGDYSKADKVLNNIKLQQEFYSAEVLPSPAKVQTELWYNRINIFEQLFQAYLYLGTVLFIVLLWHIFMPKQFFRRLTQIGIALLWLCFILHTVGLIVRWYLSGHAPFSDAYESMIYVGWSAIGVGLFFSRRSPLTVAATAFVTAMILMIAHWNWMDPAIGTLQPVLNSYWLMLHVAVIVGSYGPFALGMLLGVINLLLMIVTTRKNAYKINLIQQELTIVNELALTVGLVMLTIGNFLGGMWANESWGRYWGWDPKETWALISIMVYALVIHLRLIPHWRGRWAFNFLSIIAFGSILMTYFGVNFYLTGMHSYATGDKIITPTFVYYAVGIVLLLGLVSYLRVKNTS
>NC_013162.1|WP_015782807.1|2096219_2097137_+|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase
MRFSQPYTLKQIATIINAKYVGAEDFPVLGMNEIHVVQAGDIVFVDHPKYYEKALHSKATIVLINKEVECPEGKALLISDDPFRDFNKLTDFFKPFQNATALIAPSARIGENTVVQPGAFVGNNVVIGNNCRIHSNVSIYDDCVIGDNVTIHAGTVLGADAFYYKKRPEGFDKLKSGGRVVIEDNVDLGALCTIDRGVTGDTTIKKGTKIDNQVHIGHDTVVGEKCLIASQTGIAGCVVIENEVTIWGQVGMTSGITIGEKAVILAQSGISKSLEGGQTYFGYPAGEAREKYKEMSALKQLINCK
>NC_013162.1|WP_015782817.1|2108809_2109169_+|hypothetical-protein
MTEHELLKARWEEVVQRLSDTFTEGETLGVDGIIYLIGVQELGQLGRTYVKDEKVDLMHIGICKLLEPFGYYQYEFTDPDGWPHYRLVQNLPDLKPGEQTILMKKAIVQYFLEREFFND
>NC_013162.1|WP_015782818.1|2109199_2110507_+|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB
MKKVAFYTLGCKLNFSETSTIARSFEEEGYQRVDFDDPADIYVINTCSVTENADKQFKQIVRKALKTNPKAFLAAVGCYAQLKPEELASVDGVDLVLGAKEKFNITQYIDDLTKNNEGVVHSCEISETDFYVGSYSIGDRTRAFLKVQDGCDYKCTYCTIPMARGISRSDTIENIIANAKKISDKGIKEIVLTGVNIGDYGKGEFGNKKHEHTFLELVQALDKVEGIERLRISSIEPNLIKDETIDFIAQSKSFVPHFHIPLQSGSNEILKKMKRRYLRELYVSRVAKIREVMPDACIGVDVIVGFPGETDEHFLETYYFLNDLDISYLHVFTYSERDNTEAVLMDGVVPDAVRAKRSKMLRGLSAKKRNAFYTSQLGKEKTVLFESDNKQGYIHGFTENYVKVKAPWDPSLVNTLHKVKLTKIDADGMVRFEFV
>NC_013162.1|WP_015782819.1|2110527_2111181_+|hypothetical-protein
MKFLLTIPLSLLVLACDNSVISLKKNCNAETAKQTVAELAEVKAKIQQIESLAGSNRTYWVQDSLQQDSKTYYRYQLMSQLPYADIHLYTFCVAKDDCKQVFLQQKGGSLLPYAEMEKQTKQLLDQQKQFPAFFKQFTTDMAFRQQHLAEPLMRLLVQKDGSVLLTEEELLTDDINALQTYTFSYYPDGVCCKNTEKAIAFVFVPVGDTWRLLEIWH
>NC_013162.1|WP_015782820.1|2111228_2111858_+|trimeric-intracellular-cation-channel-family-protein
MEDFINVLSQIDQIYLWDLIGTAVFGISGVLVGLERRMDIFGMLILAFVTGVGGGTLRDIMIGSVPVFWMNNLTYILMIVISVVITVVFKKQFSEHWSKSLMVFDTIGLGVFTIIGIEKALRFGLSPTIAIILGTMTGSFGGVIRDILANKLPAVFHKEIYATACIAGGTVYFLIDNFVNHNLVVFITIIVVIAVRLLSVKYHWELPKF
>NC_013162.1|WP_015782821.1|2111926_2113672_+|ABC-transporter-ATP-binding-protein
MAHLRHIRKYFYKYKYHLLLGILITIVSRVFSLFMPRYVKNSIAAIEDFAKSANKDASQMTSLLIEYALIIIGTTIISAVLMFFMRQLIINVSRYIEYDMKNEIFKKYEQLSLSFYKRNRVGDLMNRISEDVSKVRMYAGPAIMYSVQTITLFACVIPLMFIISPKLTIYTLIPLPILSLLIYKMSKKINIETMKVQAYLSDLSTFSQETFSGIGVIKSYNNEAATDAQLAVLAEDGRQKNIKLAKIQAFFIPTMILMIGLSLIFVIFIGGKLYYTGEIQSIGVIVEFSIYVMMLTWPVATVGWVSSIVQQAEASQKRINEFLSEVPQIRNQVGELTPIKGDITFDKVFFRYEDTGIEALKDVSFHIEAGQTVAVIGKTGSGKTTLLDLIARMYDANQGEVLIGGKPVRELNLHSLRRAISVVPQENFLFSDTIRNNLRFGNKNATEEQIIQACQKAVVHNNITEFTHQYDSVLGERGVSLSGGQRQRVAIARALLKEAEIYLLDDCLSAVDTDTEEKILTNLRDTLKGKTVIIVSHRVSITKYADKILMLDKGKLVEQGTKDELLARNGAFKAFYDSQTI
>NC_013162.1|WP_015782822.1|2113700_2114780_+|isochorismate-synthase
MKIKTEDYISFEELLKQVQHKYAEHLPFVCYKPPYHTSVILLQQEDDTLHFFNADKEEQEGFVFAPFDANEPAVIITANKVTVSHLPTQSIVENTNIDILEDTEAEKQKHIGLVTKAIDEIHRGHFEKVVLSRKITIKEVVNPFKSFANMVTRYPSAFCYLFYHPKVGTWMAATPETLFRGNGEDFCTMALAGTQPFKEGEIHWHTKEKEEQQIVTDTIVQQLQEYVNELEVSAVKTVQAGNVMHLCTEIKGKIAPDKVYELIKRLHPTPAVCGYPTEEARTFIIENELYKRQYYTGYCGWVSSNNQAFYVNLRCMQITDNEAYLYVGGGITKDSIPEKEYEETQNKTQTMKSVISVEK
>NC_013162.1|WP_002671609.1|2115105_2115831_+|DUF4369-domain-containing-protein
MKRIVMAMSALLMIACDKEDKNTMIVEGNIDGLKVGTIYLQQFVNDKLTNIDSVVANGNGKFTFKRHLESPEVFFIYLDLKKQAGTDLGDRLMFFGEPKQITINSSYDMFEVKANISGSQSQKDYGEYAHTMRQFGMRNAELLEQQVNAFKAGNTTLADSLNAASEKNNFRRHLFVLNYALTHPDSYITPYVVLVDAPNTRVKYLDSIYGKLNKEVANSKYGKEFKNYIEEARKAEKEMEK
>NC_013162.1|WP_015782823.1|2115854_2116811_-|acyltransferase-family-protein
MKERNPLIDVLKGFAIILVVIGHASQWFSGDDRTNPLYVTIYAFHMPLFMFLSGYVNFNIRGELNLSKRFQVLVIPFFVWFLISATYHGYILNIEKVWEHLCVLIYKPTQGMWFLWLLFWECALLYLALKINKHREIWVMIGLWSILIFLHRVTGAQPIFYGLPELCWYFIYFSLGYATHKYKPQALKVLRPMGWVSFIAFPLLLLFPVDKTHYILHSLRLYALALTGIAASYVLWEWCCRSENKATQCLKYLGGISLEIYVTHYYMRFLVVYIKEYISDNFYLNVAIFTVLAIIACDIIQRLVQRIKWLRRILYGRF
>NC_013162.1|WP_015782825.1|2117487_2119137_+|transcription-termination-factor-Rho
MLNIVELKSKKLTELQEIAKHLDIPKFRYVNKPELIDLILKNQKKELPNKKEEVQNDNSPIITTENTTESKKNSRKKKIEIPQKVGSSKQEKTSKTPTVKKVSSADESKTYQKKNTTSVVSNNHQNNATPTKNYSSPVQNGNGNNGNYNQNVNNGNTIVNNENFDKEKKNRYRAPDFEFDSVVDCEGVLEITSDGYGFLRSSDYNYLASPDDIYVSSSQIRLFGLQTGDTVYGEVRPPKDGEKYYPLLKVIKINGLDPQVVRDRVLFEHLTPLFPDVKFELAGKGSTVSTRLIDLFAPIGKGQRGMIVAQPKTGKTMLLKDIANAISKNHPEVYLMVLLIDERPEEVTDMQRSVRGEIISSTFDKEAAEHVKIANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGKVLTGGVDANALHKPKRFFGAARNIENGGSLSIIATALTETGSKMDEVIFEEFKGTGNMELQLDRRISNRRIFPAIDLIASSTRRDDLLLDENTLNRTWVLRKYLAEMNPIEAMEFMEKQIKQTRNNEEFLATMNN
>NC_013162.1|WP_015782826.1|2119636_2120536_+|lipoyl-synthase
MNTETLAVDEIETTTTTTLKSNKPEWIRVKLPTGKKYTELRSVVDRYNLHTICTSGSCPNMGECWGEGTATFMILGNICTRSCGFCGVKTGRPESLDWEEPEKVARSIKLMNIRHAVLTSVDRDDLKDMGSIIWAETVRAVRRMNPNTTMETLIPDFQGVERNLNRILKAAPEIISHNMETVRRLTREVRIQAKYDRSLGVLRYLKENGANRTKSGIMLGLGETEEEVIETLHDLKEAKVDIVTIGQYLQPSKQHLPVKNFVTPEQFAKYKEIGLSLGFRHVESGALVRSSYRAHKHLL

Crispr_ID: NC_013162_14

• CRISPR_ID: NC_013162_14
• CRISPR_location: 2329041-2329151
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013162_14

Consensus_repeat	Method
GAAATCGTTTTACTGAGATAGTTTTTT	CRISPRCasFinder

spacers of NC_013162_14

>14.1|2329068|57|NC_013162|CRISPRCasFinder
CAGTTCCCAACATAGGAAATCATTTTCCCGAGATAGTTTATTTAGTTTTCTATATGA

CRISPR arrays and Neighbor proteins around NC_013162_14

CRISPR arrays

The CRISPR arrays of NC_013162_14

>merge|NC_013162|14|2329041-2329151|CRISPRCasFinder
GAAATCGTTTTACTGAGATAGTTTTTTCAGTTCCCAACATAGGAAATCATTTTCCCGAGATAGTTTATTTAGTTTTCTATATGAGAAAACGTTTTACTGAGATAGTTTTTT

>NC_013162|14|13|2329041-2329151|CRISPRCasFinder
GAAATCGTTTTACTGAGATAGTTTTTT	CAGTTCCCAACATAGGAAATCATTTTCCCGAGATAGTTTATTTAGTTTTCTATATGA
GAAAACGTTTTACTGAGATAGTTTTTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_015782956.1|2330680_2331874_-|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl|CDD|234664
NC_013162.1|WP_081432994.1|2317833_2318622_-|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl|CDD|234577
NC_013162.1|WP_009417762.1|2321595_2322423_+|purine-nucleoside-phosphorylase	unknown	unknown	gnl|CDD|350160
NC_013162.1|WP_015782950.1|2322520_2322937_-|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|223894
NC_013162.1|WP_015782954.1|2327239_2328538_-|TolC-family-protein	unknown	unknown	gnl|CDD|224455
NC_013162.1|WP_009421640.1|2346621_2348205_+|phosphoenolpyruvate-carboxykinase-(ATP)	unknown	unknown	gnl|CDD|236471
NC_013162.1|WP_015782951.1|2323138_2324560_+|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl|CDD|234667
NC_013162.1|WP_015782957.1|2331876_2333565_-|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG	unknown	unknown	gnl|CDD|274627
NC_013162.1|WP_041546832.1|2341489_2342458_-|hypothetical-protein	unknown	unknown	gnl|CDD|378996
NC_013162.1|WP_009419726.1|2343651_2345841_+|DNA-helicase-RecQ	unknown	unknown	gnl|CDD|223588
NC_013162.1|WP_002672015.1|2328671_2328983_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015782949.1|2320662_2321478_+|M48-family-metallopeptidase	unknown	unknown	gnl|CDD|320690
NC_013162.1|WP_015782958.1|2333561_2334281_-|gliding-motility-associated-ABC-transporter-permease-subunit-GldF	unknown	unknown	gnl|CDD|132557
NC_013162.1|WP_015782961.1|2342828_2343437_+|master-DNA-invertase-Mpi-family-serine-type-recombinase	unknown	unknown	gnl|CDD|184041
NC_013162.1|WP_174250643.1|2340689_2341469_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_034575722.1|2318661_2319921_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_013162.1|WP_015782953.1|2325828_2327049_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223730
NC_013162.1|WP_015782955.1|2329339_2330614_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340825
NC_013162.1|WP_015782959.1|2334898_2338198_+|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl|CDD|197275
NC_013162.1|WP_015782952.1|2324559_2325732_+|alanine-dehydrogenase	unknown	unknown	gnl|CDD|240630

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_015782956.1|2330680_2331874_-|tRNA-2-thiouridine(34)-synthase-MnmA	gnl|CDD|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NC_013162.1|WP_081432994.1|2317833_2318622_-|tRNA-pseudouridine(38-40)-synthase-TruA	gnl|CDD|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	5.9289e-113
NC_013162.1|WP_009417762.1|2321595_2322423_+|purine-nucleoside-phosphorylase	gnl|CDD|350160	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA). Human PNP catalyzes the reversible phosphorolysis of the purine nucleosides and deoxynucleosides inosine, guanosine, deoxyinosine, and deoxyguanosine. Patients with PNP deficiency typically present with severe immunodeficiency, neurological dysfunction, and autoimmunity. Escherichia coli PNPII, product of the xapA/pndA gene, catalyzes the phosphorolysis of xanthosine, inosine and guanosine with equal efficiency and has been referred to as xanthosine phosphorylase and inosine-guanosine phosphorylase. E. coli PNPII is also capable of converting nicotinamide to nicotinamide riboside, and may be involved in the NAD+ salvage pathway. It is one of two purine nucleoside phosphorylases found in E. coli, which also contains PNPI, which displays a different substrate specificity and belongs to a different subgroup of the nucleoside phosphorylase-I (NP-I) family than PNPII. NP-I family members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	5.05652e-152
NC_013162.1|WP_015782950.1|2322520_2322937_-|acyl-CoA-thioesterase	gnl|CDD|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	2.55412e-44
NC_013162.1|WP_015782954.1|2327239_2328538_-|TolC-family-protein	gnl|CDD|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.56805e-40
NC_013162.1|WP_009421640.1|2346621_2348205_+|phosphoenolpyruvate-carboxykinase-(ATP)	gnl|CDD|236471	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase.	0
NC_013162.1|WP_015782951.1|2323138_2324560_+|chromosomal-replication-initiator-protein-DnaA	gnl|CDD|234667	PRK00149, dnaA, chromosomal replication initiator protein DnaA.	0
NC_013162.1|WP_015782957.1|2331876_2333565_-|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG	gnl|CDD|274627	TIGR03521, gliding_motility_protein_GldG, gliding-associated putative ABC transporter substrate-binding component GldG. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldG is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldG abolish the gliding phenotype. GldG, along with GldA and GldF are believed to compose an ABC transporter and are observed as an operon. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	0
NC_013162.1|WP_041546832.1|2341489_2342458_-|hypothetical-protein	gnl|CDD|378996	pfam12950, TaqI_C, TaqI-like C-terminal specificity domain. This domain is found at the C-terminus of the TaqI protein and is involved in DNA-binding and substrate recognition.	7.52359e-10
NC_013162.1|WP_009419726.1|2343651_2345841_+|DNA-helicase-RecQ	gnl|CDD|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	0
NC_013162.1|WP_015782949.1|2320662_2321478_+|M48-family-metallopeptidase	gnl|CDD|320690	cd07331, M48C_Oma1_like, Peptidase M48C, integral membrane endopeptidase. This subfamily contains peptidase M48C Oma1 (also called mitochondrial metalloendopeptidase OMA1) protease homologs that are mostly uncharacterized. Oma1 is part of the quality control system in the inner membrane of mitochondria, with its catalytic site facing the matrix space. It cleaves and thereby promotes the turnover of mistranslated or misfolded membrane proteins. Oma1 can cleave the misfolded multi-pass membrane protein Oxa1, thus exerting a function similar to the ATP-dependent m-AAA protease for quality control of inner membrane proteins; it cleaves a misfolded polytopic membrane protein at multiple sites. It has been proposed that in the absence of m-AAA protease, proteolysis of Oxa1 is mediated by Oma1 in an ATP-independent manner. Oma1 is part of highly conserved mitochondrial metallopeptidases, with homologs present in higher eukaryotes, eubacteria and archaebacteria, all containing the zinc binding motif (HEXXH). It forms a high molecular mass complex in the inner membrane, possibly a homo-hexamer.	3.56627e-90
NC_013162.1|WP_015782958.1|2333561_2334281_-|gliding-motility-associated-ABC-transporter-permease-subunit-GldF	gnl|CDD|132557	TIGR03518, ABC_transporter_permease_protein, gliding motility-associated ABC transporter permease protein GldF. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldF is believed to be a ABC transporter permease protein (along with ATP-binding subunit, GldA and a sunstrate-binding subunit, GldG) and is linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldF abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	2.30477e-86
NC_013162.1|WP_015782961.1|2342828_2343437_+|master-DNA-invertase-Mpi-family-serine-type-recombinase	gnl|CDD|184041	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase.	2.55473e-125
NC_013162.1|WP_034575722.1|2318661_2319921_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.24225e-13
NC_013162.1|WP_015782953.1|2325828_2327049_-|alpha/beta-hydrolase	gnl|CDD|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	8.12042e-28
NC_013162.1|WP_015782955.1|2329339_2330614_-|glycosyltransferase-family-4-protein	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	7.66916e-40
NC_013162.1|WP_015782959.1|2334898_2338198_+|DEAD/DEAH-box-helicase-family-protein	gnl|CDD|197275	cd09178, PLDc_N_Snf2_like, N-terminal putative catalytic domain of uncharacterized HKD family nucleases fused to putative helicases from the Snf2-like family. N-terminal putative catalytic domain of uncharacterized archaeal and prokaryotic HKD family nucleases fused to putative helicases from the Snf2-like family, which belong to the DNA/RNA helicase superfamily II (SF2). Although Snf2-like family enzymes do not possess helicase activity, they contain a helicase-like region, where seven helicase-related sequence motifs are found, similar to those in DEAD/DEAH box helicases, which represent the biggest family within the SF2 superfamily. In addition to the helicase-like region, members of this family also contain an N-terminal putative catalytic domain with one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), and have been classified as members of the phospholipase D (PLD, EC 3.1.4.4) superfamily.	1.30451e-36
NC_013162.1|WP_015782952.1|2324559_2325732_+|alanine-dehydrogenase	gnl|CDD|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	4.55514e-151

Protein sequences

>NC_013162.1|WP_002672015.1|2328671_2328983_-|hypothetical-protein
MAKKTYSTNLVESQVMIDGLKGRNDKLPLGVKAEDITKLEELRKKMETLNSEQEKLKADLKTKTQELSKTITEIESKVSFIKKLIKIDIPQTQWKEFGIEDKR
>NC_013162.1|WP_015782954.1|2327239_2328538_-|TolC-family-protein
MMKKLFFLLCLLPFSVVAQKLWTLSDCILYAKENNLSIKQSEIDLKATDIDKMQAKAGFLPSVNGNASYNLNEGKNINPVTNQFENAFFQSASGGVSVDLTLFAGLQNWRKLHQAELNRIASQYQLDKMKDDIVLMIINAYAEVLSNKEQIKNLKAQLEISKESLTRTRELIGAGSLPKGDIYEAEAQLLTQEQQIIATENALFIAKMGLAQLLLLKNYRDFDIADSAFEQPSADILNKTPEEIYERAKEVMSDVKLAEANMQVAQNSLRLSQSAYSPRLSAQWGYSSRWSKKQAQDFWQQLDANKGMYAGLSLNIPIFNGFSTLGTVKRQRLNFLKSQFAKEQAELTSEKNIYQAYNDASNAKKLYEASEKTVQAKQQAFSYAQERHNVGLMNTFDFSQAKYQYENAQNDFVKAKYQYIFKLKVLEYYFSH
>NC_013162.1|WP_015782953.1|2325828_2327049_-|alpha/beta-hydrolase
MKKCILFSAITLFVVGLQAQNKFKVTPDEARNGSYTISPTLPKDGMVKAGTVLTLKATPATGYIFDSGYYSLPEQWGAMFYEQSTPEFKVKVDKDMNVGACFIPRKAEANLKVVQDIVYAKPGVKPLKYDVYSPKGKQNLPCIVIIHGGGWSSNTESVMRGLARELANSGRYVVFNIDYRWIDKLDGDSTPTQLHQIIEDVYGALLHIAENAAKYGGDSSKLLLTGDSAGGHLSASAANFVERIGDRGFGKTQGVYEFMPTYMPKGKTVAQVRNELVKAIKAAAPSYGVFRPEMLTHRFKDYPYLNEIAPINSIPEASKRTVPQLLFRGSEDGLIKDEEVKAYERALSKAGQRVEYIQVGGANHAFFDWKPDTKTQATFNKYGKYHAREMLLFFDSVLEGLNKTEN
>NC_013162.1|WP_015782952.1|2324559_2325732_+|alanine-dehydrogenase
MESLSQLLPQEERLAVSNEQKSLKIGLPKEQTFQEHRICLTPDEVAVLVANGHQILIEAGAGEEAHFSDTDYSEAGAEIVYDTQEVFACPIVLKVQPPTTDELAYFNAQSVLLSALQLNTQDKTYFETLAQKQITALAFEYIKDEAENHPIQQSVDELTGIAAVLTASELLAEENRLLLGNITGIPPTEVVLLGANELTKAAAKTALGLGANVKIFAPSLTDLRKLRTHLPSSVYTATLQPQLLREALTHCHVLIGAMSGECRSPIVVTEEMVQQMKRGAVIVDASIGIGGCIETSKLTTLEQLTFTKYEVVHCGVPNLPSRYAHTASTLLSNILLSYLLKIGEEGGVENLLQIDKGFRNGLYSYHGILTHHNISKWFGLPYKPLHLLFL
>NC_013162.1|WP_015782951.1|2323138_2324560_+|chromosomal-replication-initiator-protein-DnaA
MKEAAEKVWSRCLEFIKDNITEQPFNTWFAPIVPVELEGNTLKIKVPSKFFCEWLEENYISLLKSAMTFTLGVNSRLVYIVDTPLTKEQLPSTNRPELAKQTLTLATETKDPGLKNPFVIPGIREITVDPQLNLHQNFDNFVEGASNRLARSAGMAVANKPGGTAFNPLFIFGGVGLGKTHLAHAIGVDIKEKYPKKKVLYVSAEKFTQQFISASTAKDKDKNTLNDFIHFYQLIDVLIVDDIQFLSGKVKTQDAFFHIFNHLHQNGKQVILTSDKAPVDLFDIEQRLLSRFKWGLSAELQTPDYETRYKILENKFYNDGAEIGEDIIAYLAENIRTNVRELEGVSNSLIAQAAFNRKEYSIELAQSIIDKSVKNNRNDLTIDHIQQIIADYFGLDIESLHSKTRKRNVVQARQLAMFFSKKYTKNSLYTIGSQIGQRDHATVLHACKTVENLIETDRAFKKYVSDLETKFSD
>NC_013162.1|WP_015782950.1|2322520_2322937_-|acyl-CoA-thioesterase
MKELYFDYVLRTRYAETDQMGVVYYGNYPQYLELGRVEWLRSIGFTYKAMEEEGIMMPVVSLQIQYKKPALYDELITIRTKLKELPSTKIEFNYEILNEKGELLSTANTVLVFVDAKTFRPVRCPEKVLKLIKAKSEE
>NC_013162.1|WP_009417762.1|2321595_2322423_+|purine-nucleoside-phosphorylase
MQQVYDKINETARIIQSYITEHTPEFAIILGSGLNKLEDEVEVISEIKYNNIPNFPKSTVEGHKGKLIYGKIENRYVLMMAGRVHYYEGYTMQEVTFPIRVFAQLGIKRLIVSNASGGVNPNFSIGDVMVIRDHINLFPEHPLRGKNLDLFGARFPDMSKPYSQAMITELEKIAKKHKIKLQKGVYVGLQGPSFETPAEYGMVRILGGDAVGMSTVPEVIVARHQNMEVCALSVITDLGGPDISPDVSHEEVLNAANIAMPNVILLVKNLIKSYQ
>NC_013162.1|WP_015782949.1|2320662_2321478_+|M48-family-metallopeptidase
MKKLTLIAFLLIVFSCKTNPFTGKSTLNFMPNSQVFPMAFSEYSTFLKSNKVVKNTNDAAMVKRVGERIAKAAKLWLDTNGYKGYLDDYRWEYNLVDSPEVNAWCMPGGKIVVYTGILPITQSETGLAVVMGHEVAHALADHGAQRMSAATLQQIGAIAGSVALQTSKYAAYTDQFMLAYGLGSNLGVMLPFSRSNETEADAIGIQIMAIAGYDPAEAPELWKRMSAKNNGKSTPTILSTHPSDASRIKNLTALVPKARAEAAKFGVTHFQ
>NC_013162.1|WP_034575722.1|2318661_2319921_-|tetratricopeptide-repeat-protein
MRKPLLMAAALLISAVAFGQKKELKEIEKQIRKGDLTTAKSGLSSIKGSIEGTEFAPQFYFLEAQVNVEAAKKNENVLASLQAASSAFAKVRQLEGGKGKYTNQLQTLADEAINIAAKQAQDNYERKNYKNASVAFEQVYRLSPRDTVFLYNAAVVSVENKDYDNAVKLYKELKDLGYDGAETLYLATNKQTKKEETFPDKNQRDLMVKAGTHEKARNEKTPSKRADIVKNIAFIYVEQNKTDEALKAFAEARKAYPKDANIILAEANVYLQLDNKEKFKQLMQEAAQLDPNNADLHYNIGVINMQQGNNIEARKAFEQALKIKPKYADATLNLSTTYINEGNALVEQMNSLGNSAADTKKFNELRDQKEALFKKAAEVLESYVKANGNDKNILEQLKSIYGALSDSANFQRVKKLLGE
>NC_013162.1|WP_081432994.1|2317833_2318622_-|tRNA-pseudouridine(38-40)-synthase-TruA
MLCYLLLFIKIKMRYFIELSFFGKNYYGWQFQPKAISVQEVLQKALSTLLRTPIEVVGAGRTDSGVHALQMYAHFDVTEALPANLVHKLNAFLPKDIAVHHIYEVQPNAHARFDALKRTYQYHISTQKDAFAYDYAMALTLPLNVALMNEAAQILFDYTDFQCFSKTHTDVKTYNCKIYEAHWDKVENQLIFTITADRFLRNMVRAIVGTLIDVGLQKLSLTDFEDIILSKKRSKAGASVPACGLYLTHIEYPESLFVEKKD
>NC_013162.1|WP_015782955.1|2329339_2330614_-|glycosyltransferase-family-4-protein
MRKVLIITYYWAPAGGPGVQRWLKFVKYLRDFNIEPIVYIPENPTYPIIDNEIGNDLPTDIQIIKHPIWEPYAWASLFSKKKTQKISSGIIPRKKVSILDKVLLWIRGNFFIPDARKFWVKPSVKYLNKFIKENQIETIITTSPPHSVHLIGYELKKQIPHLKWISDFRDPWTTIGYYKDLRLTKWADKRQHYWEKEVLQQSDLVITTSFKTQKDFQQLTNTPIEVITNGYDEEKTITPPLSNKFLISHIGSLLSDRNPKILWKILAELVREEPHFAEDFTLCFAGKVSEEIEEDIRHNGLTPYYINKGYISHQEAIGLQKQSQVLLLIEIDSEETQGIIPGKLFEYMISGRPILAIGPHNWDVTPILTETQTGTFVGYTDASQMKAKIVEFYHQFQHKTLKTNPKEVEQYSRKALTQRLAQLI
>NC_013162.1|WP_015782956.1|2330680_2331874_-|tRNA-2-thiouridine(34)-synthase-MnmA
MKRVVVGLSGGVDSSVAAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLEDSNDALLVAEKLGIPFQTVDMSEPYKARIVDYMFNEYEHGRTPNPDVLCNREIKFDVFMKLALSLGADYVATGHYCRKEEIEIKGGKIYRLLSGKDENKDQSYFLCQLSQDQLSKALFPVGELQKSEVRAIAKAQDLITADKKDSQGLCFVGKVRLPEFLQQKLQPKQGDIIEIPNDWKGYTDFDMPRTFETYEDELEYLSQRFVYQPENGKKVGIHQGAHYFTKGQRKGLNVGGTKEPLFIIETDIEKNIIYTGQGHTHRGLFRSALFIATPDEHWIREDLALKIYESKEFMVRIRYRQPLQKAVLYKVENGLYIHFSEPQSAITEGQFAAWYSGDELVGSGVIS
>NC_013162.1|WP_015782957.1|2331876_2333565_-|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG
MKKLFQNTVIKVLIALVCLLAVNYIAKQWHTRIDLTQDKRYTLSEVSKKTLAKIQNPIVIDVLLKGNIPTEFKKLQTETIQLLDEYAATNNNIIVNFVNPLEGEEHPESVIQELINNGYQPLQITQNEAGKSSIEYIFPWAVISDGKKSERVRLFVNKLGSTDQEQVQNSVQKLEYNFTDALYKFTLDKKKKIAVLRSNGALEDIYMADFLKTAREYYFIAPFTLDSVATNPEKTLHDLEKFDLLLVPKPTEPFTDAQKQVVDQYIMNGGCALWLIDNVAVSLEDMYKTGGMTMAMPINLNLTDMFFQYGFRINYTLVNDLYFSEIIVATGDGSQTRYMPIPWVYNPLVLSGNNHLINNHLDAVRFQFANSIDTLKNGVKKTVLLTSSPFSKADGTPREINLRIDPNNQNKEAYKHGNIPLAVLLEGEFNSVYKDRIHPINLKEKSDRSKPTKMLVVADGDIIKNDIDSKNNIPLELGFDKWTNKYYDNKAFLQNALNYLLDDTEFLSLRNKKVQLAFLDKEKVAESASSWQVKVFVYPLLLLILVMLSILYFYRKKNIKKE
>NC_013162.1|WP_015782958.1|2333561_2334281_-|gliding-motility-associated-ABC-transporter-permease-subunit-GldF
MYALFKKEIRYFFTSPIGLTIIGLFIVLNGLFLWVFKTDYNIFNAGFADLLPFFRLSSWFFVFLVPALTMRSISEEKKSGMLALLFTKPVSTLQMVLGKYLGILFLLLVILLPSVLYVYMVWVLGNPVGNLDIAGTVGSYIALFLLVATFAAVGLWASSISSNQIISFVLAAFLCFFFFFGIDQLIAFVAPDDFVGVGFQTHFDAISRGVLDTRNILYFLSVILFFIYLTTLSLKAYKR
>NC_013162.1|WP_015782959.1|2334898_2338198_+|DEAD/DEAH-box-helicase-family-protein
MSSKFFTNTEGNTLFKKFEGIIKAMKPVAFKAVSAYFRSSGYFKMREMLKEVEEVKILVGINVDTLIADAQKRGILYFKNSDKTKEEFEKWFIEDVKEAQYSKEVEESILQFIQDIVDKRIEVRVHNSQSIHAKFYIILPKEHSEYTDGWVVMGSSNLTDAGIGSKKAPNYELNIALKDFDDVEFAKKEFDKLWEDSDVLLPADVDGLIKKTYIGQTFTPFEIFIKLLIEYFGKNIDYDPNTVGDLPSTYKKLSYQIDAVNQGFEMLQKHNGFFLADVVGLGKTVIASMIAKRFCIANGFAQTKILVVTPPAVEKNWKQTFKLFKLDKNTKFITNGSLNKIVDEKDLDNYWEIDEYDLILVDEAHKYRNHRSQGFDYLQRICKTPRKAEGLIEGDKKKVILISATPLNNRPEDLYYQVQLFQDIRTSTLEKVNNLQNFFAPLIREYKDIMNTTTPDMGKVRNIYKQIREKVIAEITVRRTRKDLKKYPKYLDDLKEQGIIFPEIAPLQTIEYQLDTSLGKLFYETIFNLTDDDKISYYRYQAIRFLNKEIQEEYYEKAELVSQSLAGIMKTLMVKRLESSFVAFKKTLENLLKSTQRMIEMFENDRVYIAPDLNINTLYEKGFSEEEIEEIILQKNAKNARNNIFSADDFDPVLLEGLKKDANSLKTLFEKWQKIKNDPKIDKLFSILNSTLLDKEKNPSQQLIIFTESNDTADYLTEKLSTKIAPNKILKVSSENRSKIFDDIQANFDANYTKERRNDLQILITTDVLAEGINLHRANVLLNYDTPWNATKLMQRLGRINRIGSEAGIVYNFIFYPSAQGDEEIKLYKKAYIKLQGFHSAFGEDAQVFSKEELVEQFELFKEGGEGEEDKRLHYLRFIREFKDNNPKEFKRISNIPFKARTARKNEKTPFDDVKNGSIIFMKSPYKSEFYRVNGKEEIESIDFLEAAERFEATVSEKGFEVPASHYKDVNLAQSKFENDTIQANIETVTPTDKADGNTMQAKKFLRDIKGTLNNEELKIACDQLIKLIDKGTFTNIPTDVKKIRQQLDKQKITFGNAQQLILNLANKYAVSSFDSIKNNKEKALDISPEIVITETFIK
>NC_013162.1|WP_174250643.1|2340689_2341469_+|hypothetical-protein
MNNCEVIKISSYGDRPKRVFESAEQQVSIISFLKTQTEAKEILMTGINKRYSDDSLWVLLDNLKFSNAIGLLSYGRIPKIGTNTEQIILQKLLKNSNLLSDLKTEKGSSIYYRKAGGRYYKIITKDSTESSAEGSIIIENRYLDLVGAILSSNLFYWFWLIHSDWHNMRTSEIENFPIPYNNFNDKTLEQISKLYNIYLTDLKKNAKKTVTGLNVFVARKSKHIIDQIDDLICPLYGLTQEETDFIKNYEIEFRLSDND
>NC_013162.1|WP_041546832.1|2341489_2342458_-|hypothetical-protein
MNIIINLGENVFNNAVVSTAIILLEKKKESSKIKIADLSTNSKFLGSFDKIVFLEIVQTTFNDTESNIFAMNIRRKAENEYSLGEIMELKDAGINYQRVNVGLSDKGKSDLSKRLLYKGEKETESDKEFWKGEDINAYYIIKNTNRFVRNDIKLNENERVILNRKYFKIIPKLIWRQTAQYPICTIDYIGIWFGRSIQAGIIKDSFINRVSYEYLCGLLNSKYLRYLYENNVRETGKVFPQVKLEKLRPLSIIISENQSPIVNLVNEAIKAKRENPKADITNIENQIDILVYKLYNLTYEEVKVIDPNIESIISKEEYETKK
>NC_013162.1|WP_015782961.1|2342828_2343437_+|master-DNA-invertase-Mpi-family-serine-type-recombinase
MIYGYIRVSSDKQTVENQRFEITNFCEKNSLTIDVWVEETISGMTRVENRKLGKLLKKMKKGDVLICSELSRLGRNLLMIMGVLNECMNRDIQVWTIKDNYRLGSDINSKVLAFAFGLSAEIERNLISQRTKEALARKKAEGVVLGRPKGSKSAKTKLTGQEKKIKELLDKRVSYSAIGRILGVHRLTVSSFVKERLPLISH
>NC_013162.1|WP_009419726.1|2343651_2345841_+|DNA-helicase-RecQ
MEMTKDDLHNALKHYFGFEAFKGHQEEIITSVINKENTFVIMPTGGGKSLCYQLPALVLEGTAIVISPLIALMKNQVDAMRGISSTDSIAHVLNSSLTKNEIREVMEDISAGKTKLLYVAPESLIKEEYANFLKTVPISFVAVDEAHCISEWGHDFRPEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEANVFKSSFNRPNLYYEVRPKTKNVDADIIRFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAEQEIGQALLQDIVAYAETSSSRRKFILHYFGEEFDEVNGEGANMDDNVRFPKEKKEAKDDVVKLLNVIIATKQKFKAKEIVNTLIGKVSAIIKAHRIDEQEFFGIGKEKDDAYWMALLRQVMVNGLIRKDIETYGVMFITDKGKEFLKDVPSFMMTEDHSYEEEPEDINSANAVAADPVLLEMLKDLRKKVAKQKGVPPFVVFQDPSLEDMALKYPITIQELTNVHGIGEGKAKKYGSEFVKLIERYVEENDIVRAEDLIVKTTGSNSALKLFIIQNIDRKLPLPDIAQAKGLEMDEFLKEMEQIVYSGTKLNIDYWVNEIFDEEQQEELHEYFMEAESDKISLASKEFAGDYEDDELRIYRLKFISEVAN
>NC_013162.1|WP_009421640.1|2346621_2348205_+|phosphoenolpyruvate-carboxykinase-(ATP)
MSKPKTLSVDKYGIKNANVRYQLTADELQQETLDKKLGVEASSGAIAINTGKFTGRSPKDRFIVKDDITKDRVWWGSINIPFEPAKFDKLYEKVVAYLSNKEIYVHDGYVCADPKYRTNIRTITELPWSNLFAYNMFLRIDDSELPSFKEDWLVVNAPGFEADPAVDGTRQANFAILNFTKKIALIGGTGYTGEIKKGIFSAMNFELPVFRNTMPMHCSANVGKGGDTAIFFGLSGTGKTTLSADPNRHLIGDDEHGWTPENTVFNFEGGCYAKVVDLTAEKEPEIFGAIKKGAILENVIMDDKGVVDFSRTDITENTRVSYPIYHIANIQPGSIGHNPKNIFFLTFDAYGVLPPISKLTPEQAAYQFVSGYTSKVAGTEVGITTPQKTFSACFGAAFMPLHPAEYGKRLAEKIKETGVNVWLVNTGYNGKMKRCSLKDTRALITAALNGKLNNVEYKELPIFGFKVPQSCEGVSDQSILNPENTWSDKAQFSAKLKELAESFVQNFKDKKFAEGASADVLAGAPKL

Crispr_ID: NC_013162_15

• CRISPR_ID: NC_013162_15
• CRISPR_location: 2511615-2511736
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_013162_15

Consensus_repeat	Method
TTGTTCGTTCATTGTTCGTCTTT	CRISPRCasFinder

spacers of NC_013162_15

>15.1|2511638|21|NC_013162|CRISPRCasFinder
CGTTCGTTCATTGTTCGTTCA
>15.2|2511682|32|NC_013162|CRISPRCasFinder
TGTTTATCTGCCCGTGCGGCTCGCACCGTCTT

CRISPR arrays and Neighbor proteins around NC_013162_15

CRISPR arrays

The CRISPR arrays of NC_013162_15

>merge|NC_013162|15|2511615-2511736|CRISPRCasFinder
ACCTTCGCTGATTGTTCGTCTTTCGTTCGTTCATTGTTCGTTCATTGTTCGTCTTTTGTTCGTCTTTTGTTTATCTGCCCGTGCGGCTCGCACCGTCTTTTGTTCGTCTTTTCTTCGTTCAT

>NC_013162|15|14|2511615-2511736|CRISPRCasFinder
ACCTTCGCTGATTGTTCGTCTTT	CGTTCGTTCATTGTTCGTTCA
TTGTTCGTCTTTTGTTCGTCTTT	TGTTTATCTGCCCGTGCGGCTCGCACCGTCTT
TTGTTCGTCTTTTCTTCGTTCAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_015783076.1|2523548_2524160_+|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl|CDD|223257
NC_013162.1|WP_015783064.1|2506962_2508315_-|UDP-N-acetylmuramate--L-alanine-ligase	unknown	unknown	gnl|CDD|234757
NC_013162.1|WP_015783074.1|2520418_2520805_+|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl|CDD|224109
NC_013162.1|WP_015783067.1|2510417_2511368_-|membrane-protein	unknown	unknown	unknown
NC_013162.1|WP_041546856.1|2518797_2519502_-|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl|CDD|224104
NC_013162.1|WP_015783061.1|2504201_2504675_-|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl|CDD|376840
NC_013162.1|WP_009417311.1|2503406_2504201_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl|CDD|153251
NC_013162.1|WP_015783070.1|2515996_2516905_+|C40-family-peptidase	unknown	unknown	gnl|CDD|366353
NC_013162.1|WP_015783062.1|2504719_2505184_-|macro-domain-containing-protein	unknown	unknown	gnl|CDD|394873
NC_013162.1|WP_015783059.1|2501517_2502264_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl|CDD|238847
NC_013162.1|WP_015783066.1|2509283_2510366_-|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase	unknown	unknown	gnl|CDD|234825
NC_013162.1|WP_015783063.1|2505486_2506902_-|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_013162.1|WP_015783060.1|2502270_2503221_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl|CDD|224936
NC_013162.1|WP_015783065.1|2508369_2509278_-|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015783071.1|2516901_2518812_+|ComEC-family-competence-protein	unknown	unknown	gnl|CDD|377126
NC_013162.1|WP_015783073.1|2519503_2520337_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl|CDD|223619
NC_013162.1|WP_002672484.1|2524258_2525035_-|diadenylate-cyclase	unknown	unknown	gnl|CDD|224539
NC_013162.1|WP_015783069.1|2513399_2515931_+|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl|CDD|223616
NC_013162.1|WP_015783075.1|2520799_2523145_-|transketolase	unknown	unknown	gnl|CDD|238958
NC_013162.1|WP_009410124.1|2512388_2513198_-|M48-family-metallopeptidase	unknown	unknown	gnl|CDD|320693

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_015783064.1|2506962_2508315_-|UDP-N-acetylmuramate--L-alanine-ligase	gnl|CDD|234757	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional.	0
NC_013162.1|WP_015783074.1|2520418_2520805_+|RNA-binding-S4-domain-containing-protein	gnl|CDD|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	6.05948e-23
NC_013162.1|WP_015783076.1|2523548_2524160_+|fumarylacetoacetate-hydrolase-family-protein	gnl|CDD|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	5.52479e-51
NC_013162.1|WP_041546856.1|2518797_2519502_-|CDP-alcohol-phosphatidyltransferase-family-protein	gnl|CDD|224104	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism].	4.68149e-30
NC_013162.1|WP_015783061.1|2504201_2504675_-|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl|CDD|376840	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase. This family of proteins are predicted to be SPOUT methyltransferases.	8.25865e-80
NC_013162.1|WP_009417311.1|2503406_2504201_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl|CDD|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.52805e-19
NC_013162.1|WP_015783070.1|2515996_2516905_+|C40-family-peptidase	gnl|CDD|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.40379e-30
NC_013162.1|WP_015783062.1|2504719_2505184_-|macro-domain-containing-protein	gnl|CDD|394873	cd02901, Macro_Poa1p-like, macrodomain, Poa1p-like family. Macrodomains are found in a variety of proteins with diverse cellular functions, as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Macrodomains can recognize ADP-ribose (ADPr) in both its free and protein-linked forms, in related ligands, such as O-acyl-ADP-ribose (OAADPr), and even in ligands unrelated to ADPr. Members of this family show similarity to the yeast protein Poa1p, reported to be a phosphatase specific for Appr-1"-p, a tRNA splicing metabolite. Poa1p may play a role in tRNA splicing regulation.	9.93333e-31
NC_013162.1|WP_015783059.1|2501517_2502264_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl|CDD|238847	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.	1.63923e-58
NC_013162.1|WP_015783066.1|2509283_2510366_-|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase	gnl|CDD|234825	PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional.	1.93071e-158
NC_013162.1|WP_015783063.1|2505486_2506902_-|trypsin-like-peptidase-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	4.98888e-136
NC_013162.1|WP_015783060.1|2502270_2503221_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl|CDD|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.26535e-80
NC_013162.1|WP_015783069.1|2513399_2515931_+|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl|CDD|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
NC_013162.1|WP_015783071.1|2516901_2518812_+|ComEC-family-competence-protein	gnl|CDD|377126	pfam03772, Competence, Competence protein. Members of this family are integral membrane proteins with 6 predicted transmembrane helices. Some members of this family have been shown to be essential for bacterial competence in uptake of extracellular DNA. These proteins may transport DNA across the cell membrane. These proteins contain a highly conserved motif in the amino terminal transmembrane region that has two histidines that may form a metal binding site.	1.24709e-58
NC_013162.1|WP_015783073.1|2519503_2520337_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl|CDD|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	9.3812e-14
NC_013162.1|WP_002672484.1|2524258_2525035_-|diadenylate-cyclase	gnl|CDD|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.05672e-54
NC_013162.1|WP_015783075.1|2520799_2523145_-|transketolase	gnl|CDD|238958	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).	7.50927e-71
NC_013162.1|WP_009410124.1|2512388_2513198_-|M48-family-metallopeptidase	gnl|CDD|320693	cd07334, M48C_loiP_like, Peptidase M48C Ste24p loiP-like, integral membrane protein. This subfamily contains peptidase M48 Ste24p protease loiP (formerly yggG)-like family are mostly uncharacterized proteins that include E. coli loiP and ycaLG, considered to be putative metallopeptidases, containing a zinc-binding motif, HEXXH, and a COOH-terminal ER retrieval signal (KKXX). They proteolytically remove the C-terminal three residues of farnesylated proteins. They are integral membrane proteins associated with the endoplasmic reticulum and golgi, binding one zinc ion per subunit. In eukaryotes, Ste24p is required for the first NH2-terminal proteolytic processing event within the a-factor precursor, which takes place after COOH-terminal CAAX modification (C is cysteine; A is usually aliphatic; X is one of several amino acids) is complete. Mutation studies have shown that the HEXXH protease motif, which is extracellular but adjacent to a transmembrane domain and therefore close to the membrane surface, is critical for Ste24p activity. LoiP has been shown to be a metallopeptidase that cleaves its targets preferentially between Phe-Phe residues. It is upregulated when bacteria are subjected to media of low osmolarity, thus yggG was named LoiP (low osmolarity induced protease). Proper membrane localization of LoiP may depend on YfgC, another putative metalloprotease in this subfamily.	1.8749e-112

Protein sequences

>NC_013162.1|WP_015783067.1|2510417_2511368_-|membrane-protein
MAIVFIACHKNNDEVPQPDPNKPTPDKPIPDKPKPDNPKPNTPTNAYLYGITIDDSWDKTKVTVQQIVSAIKAMPVKPTVRIVMSKGTAIANYKPLFSAVHQVAYVMATPADSEDMKGYKTVDSYVKRFQDSYKELSAYTDFWEVGNEINGEGWMGDNPQFIADKAYGAYKFIRSKNAKTVLVSYYFKPGDQKVTMEDWLKRYIPEDMKKQLDYVLVSYYEDDNDNYQPNWQEVFNNLESIFPNVKLGIGECGNNDYKKYSVQSKVQRAKHYYSMPKYVKNYVGGYFWWYWVQDCVPHQNSEVFKAINSSIKQTLK
>NC_013162.1|WP_015783066.1|2509283_2510366_-|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase
MKKFIISGGGTGGHIFPAIAIADELKRRIPDADILFVGAKDRMEMQKVPQAGYPIEGLWISGIQRKITLQNLLFPLKFISSLLKSRSIIKRFKPDAVIGTGGFASGAVVKVAGGMGIPTFIQEQNSYAGITNKMLSKKAKKICVAYDAMEQFFPKEKIVKTGNPIRDGLLDIAKHRTEGLTYFQLNPEQKTLLVLGGSLGARRINQLVEEQLPLFEKLGVQVLWQCGKLYYEEYKKYESERVKVLAFIDKMELAYAVADVIISRAGASSVSELCVVGKPVIFIPSPNVAEDHQTKNARAIEQKQAAILIRETDLGTTFATTFTELINDEAKQQSLSQHIKTLALPNATEEIVNIILENKN
>NC_013162.1|WP_015783065.1|2508369_2509278_-|hypothetical-protein
MKRLFTFIALVCAAFTFAQNQLGKQFFIDTKSDEFKRGIVEVKEYVNYDAYLQLQRNLKSGNSAGINSDMIRQAYMTRKVALPKGNYVIDNDEQRFEFEIGNNGQFVGEGQFENKEKNLKSTYIFANGKLSEIHIFNTEGRLRKKNIFKGNIIEGHVFDHAGKLAQKIEIHTNLKEGADQVVTTYHKNGNPSKEVNAIKSTTKEFYQNGKLKLDQVDSKITTKYDPTGKITEKWYVTENGNCRETYDKGVISQKTCEDRSTKETTVFIYKNGKLDNYTVTDTKKKEVRKYDASKKLIETKKL
>NC_013162.1|WP_015783064.1|2506962_2508315_-|UDP-N-acetylmuramate--L-alanine-ligase
MDLQPIQNVYFIGIGGIGMSALARYFNANGKKVCGYDRTPTEITEMLEKEGIKVHFTDDVNAIPASFKDKHTTLVVYTPAVPKDHKELNYFQQNGYEVVKRSEVLGFITKNTFCLAVAGTHGKTTTSSILAHLLVEAGASVSAFLGGIAENFNSNLVLKGSEYTVAEADEFDRSFLRLSPNIACITSMDADHLDIYGDKEHLIEGFREFAGKIKPGGSLIVRNGLDIEGETYGLEDNADYTFQNITVKNGIYHFDFHYKGGVYKDYTLLKPGRHNLLNALAAVSMAVKAGFAPEKLLPHLATFKGVKRRFSYIIKEDNFAFIDDYAHHPSEINALFQAVEEMYPHTPKTIVFQPHLFTRTRDFLDDFAKSLSQFDDVVLLDIYPARELPIEGITSQVLLDKVTAKQKILVSKAELIPLLLKKQPKLLLAVGAGDIGAEVEKIKEAFTVGH
>NC_013162.1|WP_015783063.1|2505486_2506902_-|trypsin-like-peptidase-domain-containing-protein
MMKNYATMIATAFLGGAMTLGGYKLFIDKHDAKQEALELLSRPALVQTNHTTPERTVAGETNFVEAANKTVNSVVHVKNTVKSQGGVTSIFDLFYGNGGGEQTQVGTGSGVIITPDGYIVTNNHVIANATTLEVTLNNNKTYTAKLIGTDASSDIALLKIEADEKLPFLTFADSDNTQVGEWVLAVGNPFNLNSTVTAGIISAKARNISERGSDKIESFIQTDAVVNMGNSGGALVNLNGDLIGVNTAISSTTGVYMGYSFAVPSNIAKKVVEDLIEYGNVQRGVMGVRGQGLDSEVAKKLNIKETEGFYVDSVDDESGAGSAGLKKGDIIKQIDNVKIHKYSDLSGHIASKRPGDMLKVTYVREGKERTANITLKKNTTYVIQSLGLEVKNLSDADQKRFRTKNGVKVTAAGQFYEYNNINIVGKVLLSVNGKTIKDVDELKNVMSTLSSRNRNSLEILNEKGEKERFFF
>NC_013162.1|WP_015783062.1|2504719_2505184_-|macro-domain-containing-protein
MIHYLKADATVPQAEGNIVIAHICNDIGAWGKGFVLALSKRWKYPEKQYKQWYKEGDNFALGEVQFVSVEEKIWVANLIGQHNIYKDENGDPPIRYEAVEKGLQQIADFAYEINAKVQMPRIGCGLAGGSWDRIEKLIRQTLLRKNIEVFVCDL
>NC_013162.1|WP_015783061.1|2504201_2504675_-|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MNIKLLAVGKTDNPALQQLIDMYEKRLSYYINFESQLLPDIKNSKSLSKEQQKAKEGELILGNVASSHHLILLDERGKEFTSVAFADELQKKMNAGIKQLTFVIGGPYGFSKEVYDRANGKLSLSKLTFSHQMIRLFFVEQLYRAFTILRNEPYHHQ
>NC_013162.1|WP_009417311.1|2503406_2504201_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MPLFKKDPFGHTLFVKRWLIRVFGILTHSRYDGFNQLKIEGSDVIRELPPQNVLFISNHQTYFADVTAMFHVFNASLKGRKDTLDNMGYLWNPKLNIYYVAASETMKSGILPKILGYAGAIPVNRTWREKGKEIHREVRQADVENIGIALADGWVITFPQGTTSPWKPIRKGTAHLIKQYKPVVVPIVIDGFRRSFDKKGINIKKKGVQQSMIIKSPLQIDYENDTVEEIVAKIEMAIEQHESFLKVKKLDGEEAPKTVTTPQP
>NC_013162.1|WP_015783060.1|2502270_2503221_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MSILIYIDSENGKVKKSSYEVATYAKTLAQKQNTKIVAVAINIDNPEMLGTYGIDKVLNVADEKLQHFSAKAVAQILQQAVKKEGSTTVLFSASSQAKNIAPLLATSLQAGYVPNAISLPENDFTIKSNAFSNKAVSLNKITTAIKIVGLAPNAFGVKENPTPAIVEPFSPTLSDSDFDIKIIATEKATGKVPLDDASIVVSGGRGLRAAENWHIIEDLAEVLGAATACSKPVADMGWRPHAEHVGQTGKPVAPNLYIAIGISGAIQHLAGVNASKVKLVINTDAEAPFFKAADYGVVGDAFEVVPKLIEKLKAKL
>NC_013162.1|WP_015783059.1|2501517_2502264_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MKILVCISSVPDTTSKIKFTDENKKFDPTGVQFIINPNDEFCLTKAILLKEKLGTTITLVNVGTQETEPVLRKASAIGADDIIRIDATPTDAFFVATQLAKVAKEGNYDLIITGKESIDYNGGMVGGFLAGLLNLPFINKCIGLDINGTEVTAEREIDGGKEKLSATLPLVIAGQKGLTQEKDLRIPNMRNLMAARTKVITVLPAENTDTRVTTIGFEKLPAKKPVKMVSADDLDTLIDLLHNEAKVI
>NC_013162.1|WP_009410124.1|2512388_2513198_-|M48-family-metallopeptidase
MKNFILIAMSIGLFSMGQAQKINLGKAASAVTKGAQALSFTNEDAKRLSKESVDWMDAHNPVAGKNSPYTKRLNRVFGKHQNEDGLKLNYKVYLVTDINAFACADGSVRVFSSLMDLMTDDELLAVIGHEIGHVKNEDTKDAIKSAYMRAAAQDAASSASGVVRKLSDTELGEMANAILDAKHSKKQESQADEYSYNFMKKHGYNVVAVYTAFKKLALLSGGATQSKFQKMMSSHPDSEKRAEAAKKRAIKDGLWKDPGEVTLPKTPIK
>NC_013162.1|WP_015783069.1|2513399_2515931_+|ATP-dependent-Clp-protease-ATP-binding-subunit
MNDNFSPRVKRIFTYSKEEAIRLGQSTVGTEHFVLAILQEGEGSAIDLMHSLNIDMERLRQNIHTLTSARGLNPPNFNAVHFTVQAERAMQATYLEAKRSQNDMINTAHLLLSILRNENDPTTKVFNKLGVNYEVARDKFQPIRDDNYQVSSPTDEVDEYDRDYSLPHENKSGYKGQQPNQGGQYGQRKLTVLDNFGRDLTALAEQGSLDPVVGREKEIERVSQILSRRKKNNPILIGEPGVGKSAIAEGLALRIIQKKVARVLYNKRVVTLDLASLVAGTKYRGQFEERLKAIMSELEKNKDIILFIDEIHTLVGAGGASGSLDASNMFKPALARGEIQCIGATTLDEYRQSIEKDGALERRFQKVIIEPTSVDETIQILRNIKGKYEEHHNVTYTDEAIEACVKLTNRYLTDRYLPDKALDALDEAGARIHIMQVKVPQYIVELEERLEQATQAKNRAVSRQQFEEAARLRDNEKIIENSLVEMNKKWDEESKQHRDVVTADHIADVVSMMSGVPVNRIAQTEMSKLSGLSEIMKSKIIGQDEAVEKVVKSIKRNRTGLKDPNKPIGSFIFLGQTGVGKTQLAKVLAKELFDSEETMVRIDMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEKIRRKPYSVVLLDEIEKAHPDVFNMLLQVLDDGFLTDSLGRKIDFRNTIIIMTSNIGARQVKDFGQGVGFGTSARIAQSEANEKSIVENALKKVFAPEFLNRIDDVITFNPLSKEDIFKIIDIELSKLYSRINDLGYGVQLSQKAKEFIADKGYDKQYGARPLKRAIQKYVEDILAEEIVSNQVHEGDSIHFDLDEKGENLIITQKELI
>NC_013162.1|WP_015783070.1|2515996_2516905_+|C40-family-peptidase
MYVLRILGLFTLLLSLSSFSEAVKNTEKSVVVNTATTKAVENKSKPKKKTFSPPKKGRKATTRVATTTKKRHKLPPKRSVAHHSAKKSVKKAPVKRALAITDKKKKPVKADIAVAKSKRYAPKKHTGNKALKQYAENTLADTELEDDLEDEELFEEPESYETTDIALTALSKSKADTKQQKVLLDTAFSYLGTPYRHGGVTRNGMDCSGFVSTTFKSISVPLSRSSQEMATQGTKIDLEDVKVGDLLFFRTTRKSRISHVGMVVDIDGDIKFIHSSSKRGVVISSLSDEYYKKTFRMAKRVM
>NC_013162.1|WP_015783071.1|2516901_2518812_+|ComEC-family-competence-protein
MRFVNTPILTILLGLIGGIAITDVIAPSFLFAISSCICLLLTLAIHQFLATKRYALRHGIVIHVGLTSVAVGILITILHTPTYNPKHYTQKLNANEYYTLEADIIEQTSQTDYGTTFKAELLTANHTSIEGKILCFFPSKTITDDVKTLAPTDRLVFVGKYTPISPPKNPYQFNYKRYMERKGVYGRTEVVAFSVVKNNTTGFMGSIARTHSHLAIVIDKHFNQESSALLKTLLLGKRTDLDNEVYQHYVDAGAVHILAISGLHVGIITAILLLLLQKMPNLGFYRPLRYFILLAGLWAFAFIAGTSPSVLRATVMFSFVGLSTLIRRKQGRFDALMLSMLFLLLINPYYLYDVGFQLSYAAVFSIMKFYPVMRKWWQPENKYLQWIWSLFLVGLSAQIVVLPISLYYFHQFPILFFVSNLVVVPLLQPILIGGIISLCLGSLGILPYAIVFILEKLIALMNFLVAFIAHQEMFIIRNIPFTTPLLLSSLLMVFILIIFVHFRKYKVLVALLLSVILFQGVLFYHKYKLETTEEMLVFSKYKQKVITIRQGDKLSIYQTDTISPDPVVMNYIKNKGISNIELKKIPYILHFKQKNYLLMDSLGVYPKSKQVVIDSVIFLQKPKINLDRMKQDLSLR
>NC_013162.1|WP_041546856.1|2518797_2519502_-|CDP-alcohol-phosphatidyltransferase-family-protein
MKKYVPNLITLSNLFCGTVAIVFAVRGTIDWAALFVAIGIFLDFFDGFFARLLHVKSEMGLQLDSLADMVTSGVVPGIAMFQLLNNSTYVLQTEGTFVMLLPYVGFLITLASAYRLANFNIDTRQTSGFIGLPTPANTMFILSLPLILQYQPTELFDSLLHNMWVLLGITLLSAYLLNAEIALFALKFSDYSFKNNALKYIFLALCVILLLSLKIIAIPLIILLYIILSLLPKR
>NC_013162.1|WP_015783073.1|2519503_2520337_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MMNKFIFTISTIGLLFAVSCKKNENSNITPPRDVTEVRNENNQSIETFLKTHTYTFSATTAISETVTFATTSSTTASIFNDSKLKRLELDVYDANNTLVRHTLYYLILQEGTGTTTTIADSVYVNYKGQLLDLSVFDETTTQSTSNWIDLIGNIVTNKPSGTIRGFREGVAQLRASATGLTNNSDGTLNAPTDGGVGVFFIPSGLGYFNNSQAKIPAYSPLIFTVRLIATRRADHDHDGKPSINEIVRNEYGVVTYPDCDANKDTSYLPDYLDADCK
>NC_013162.1|WP_015783074.1|2520418_2520805_+|RNA-binding-S4-domain-containing-protein
MRIDKYLWCVRYFKTRNIATEACKKGHIKVNGETTKPSREIYKNDQIVVRKNQINYQIEVLDIPESRVGAKLVDLYRQDNTPPEAFEQAEIQKLAQDYYREKGEGRPTKKDRRAIDNLLNDFQEDNEL
>NC_013162.1|WP_015783075.1|2520799_2523145_-|transketolase
MKKEDVLEDYGIAVLSRECSLMGKKEVLTGKAKFGIFGDGKEVPQVAMARAFQYGDFRSGYYRDQTLMMALGVHTVENFFAGLYAHADIKADPTSAGRQMGGHFATHSLDEEGNWKDLLKQKNSSSDISCTAGQMPRLLGLAQASKVYRELPNAESKGFSNHGNEVAWGTIGNASTSEGHFFETLNAAGVMQVPMVISVWDDEYGISVPKEYHTTKESISEVMKGFQRDANHKGFEIFVAKGWDYPTLYDIYQKAARIARKEHVPVLVHVKELTQPQGHSTSGSHERYKSAERLQWEKDFDCITKMREWILAKGYATEEELQTIEEAAKKRVRDGKKKAWEAYMKPMETERKELLQLLNSIQPKTIFATELSQIPTLSRKVIMNVARKALRQFLKENKEVSNLRTWITNYIATNEPKYSKHLYTEGTHNVMKIAEVAPIYEPDAKLVDARLILRENFDALLTKYPNLLIFGEDVGNIGDVNQGLEGLQKKHGAIKVADTGIRESTIVGQGIGLAMRGLRPIAEIQYLDYILYGLQTLSDDLATLHYRTFGRQLAPLIVRTRGHRLEGIWHAGSPMGVLLHSLRGVCILTPRNMVKAAGFYNTLLEGNQPAVVVECLNGYRLKEPMPTNLTEFKTPIGVVETLREGKDITVVSYGSTLRIVCEVADELASMGIDIEIIDAQSLAPFDVRHDIVKSIQKTNRLLVVDEDMPGATSAYILQKIVEEQNAYQYLDSAPQTLAAGEHRPAYATDGDYFSKPNADSIIEKIYSIMHEANPEKYPTLL
>NC_013162.1|WP_015783076.1|2523548_2524160_+|fumarylacetoacetate-hydrolase-family-protein
MKIICIGKNYRETIEIFDKTTVQPIVVFMKPDTAIHNLEIPYYIPDFTKDLHYEIELVLKINQNGKCISEKFAHKYYDEIAVGIDFTACDLQAELSQKGLPWELAKAFDGSAIVGKFVSKETIESSSSIQFHLDKNGSTVQEGNTTQMLRSFDVIISEVSQFFTLRKGDLIFTGTPKGAGRVATGNVLEGFLMGEKGFSLKIR
>NC_013162.1|WP_002672484.1|2524258_2525035_-|diadenylate-cyclase
MKLFDILDFTIVDAIDIVLFAALLYYLYRLIRGTVAINIFMGIVIIYLIWKITEALQMQLLSSILGQFIGVGVFALIVVFQQEIRRFLLTIGSTNITARNKLHRAFHFFKEKEILLNIESLINVCQKLASTNTGALIVLEHNMPLDFVTQTGDKVNIEFSEPIIESIFYKNSPLHDGAIVIKGNHIIATRVILPVASEINLPKRYGLRHRAAISITEKTDATALVVSEETGHISYFKNGAFVKFKNNDELIKAVQSDF

Crispr_ID: NC_013162_16

• CRISPR_ID: NC_013162_16
• CRISPR_location: 2550120-2550290
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_013162_16

Consensus_repeat	Method
GACGAACAAAAGACGAAGAAAAGACGAACAAAGAACGAA	CRISPRCasFinder

spacers of NC_013162_16

>16.1|2550159|27|NC_013162|CRISPRCasFinder
CAAAAGACGGTGCGAGCCGCACGGGCA
>16.2|2550225|27|NC_013162|CRISPRCasFinder
CAAAGAACGAAGAAAAGACGAACAAAG

CRISPR arrays and Neighbor proteins around NC_013162_16

CRISPR arrays

The CRISPR arrays of NC_013162_16

>merge|NC_013162|16|2550120-2550290|CRISPRCasFinder
GATATAAAAAGCTTATAGGAAAGACGAACAATGAACGAACAAAAGACGGTGCGAGCCGCACGGGCAGATAATGAAAAGACGAACAAAAGACGAAGAAAAGACGAACAAAGAACGAAGAAAAGACGAACAAAGAACGAAGAAAAGACGAACAAAAGACGAAGAAATGACGAA

>NC_013162|16|15|2550120-2550290|CRISPRCasFinder
GATATAAAAAGCTTATAGGAAAGACGAACAATGAACGAA	CAAAAGACGGTGCGAGCCGCACGGGCA
GATAATGAAAAGACGAACAAAAGACGAAGAAAAGACGAA	CAAAGAACGAAGAAAAGACGAACAAAG
AACGAAGAAAAGACGAACAAAAGACGAAGAAATGACGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013162.1|WP_015783091.1|2548947_2549829_-|glucose-1-phosphate-thymidylyltransferase-RfbA	unknown	unknown	gnl|CDD|130274
NC_013162.1|WP_015783094.1|2553056_2553659_-|M15-family-metallopeptidase	unknown	unknown	gnl|CDD|350617
NC_013162.1|WP_015783098.1|2556365_2556545_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_009411859.1|2547485_2548850_-|DNA-repair-protein-RadA	unknown	unknown	gnl|CDD|236994
NC_013162.1|WP_041546862.1|2544174_2545332_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|226957
NC_013162.1|WP_015783085.1|2541580_2542165_+|porin-family-protein	unknown	unknown	gnl|CDD|379226
NC_013162.1|WP_041546965.1|2551806_2552985_+|glycoside-hydrolase-family-6-protein	unknown	unknown	gnl|CDD|376532
NC_013162.1|WP_041546858.1|2542417_2542696_-|hypothetical-protein	unknown	unknown	gnl|CDD|236766
NC_013162.1|WP_015783095.1|2554267_2554750_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015783097.1|2556172_2556325_+|hypothetical-protein	unknown	unknown	unknown
NC_013162.1|WP_015783092.1|2550673_2551726_+|glycoside-hydrolase-family-6-protein	unknown	unknown	gnl|CDD|376532
NC_013162.1|WP_002672545.1|2557056_2557239_+|50S-ribosomal-protein-L33	unknown	unknown	gnl|CDD|177033
NC_013162.1|WP_002672528.1|2545433_2545643_+|DUF2892-domain-containing-protein	unknown	unknown	gnl|CDD|378561
NC_013162.1|WP_015783089.1|2545648_2546068_+|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl|CDD|376735
NC_013162.1|WP_002672544.1|2556802_2557039_+|50S-ribosomal-protein-L28	unknown	unknown	gnl|CDD|234736
NC_013162.1|WP_015783090.1|2546054_2547473_-|oligosaccharide-flippase-family-protein	unknown	unknown	gnl|CDD|240533
NC_013162.1|WP_002672507.1|2540787_2541441_-|uracil-phosphoribosyltransferase	unknown	unknown	gnl|CDD|234653
NC_013162.1|WP_009410605.1|2553736_2554192_+|SsrA-binding-protein-SmpB	unknown	unknown	gnl|CDD|376590
NC_013162.1|WP_041546860.1|2542868_2544191_-|DUF1343-domain-containing-protein	unknown	unknown	gnl|CDD|377768
NC_013162.1|WP_015783096.1|2554919_2556116_-|diaminopimelate-decarboxylase	unknown	unknown	gnl|CDD|143501

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013162.1|WP_015783091.1|2548947_2549829_-|glucose-1-phosphate-thymidylyltransferase-RfbA	gnl|CDD|130274	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form. Alternate name: dTDP-D-glucose synthase homotetramer This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
NC_013162.1|WP_015783094.1|2553056_2553659_-|M15-family-metallopeptidase	gnl|CDD|350617	cd14840, D-Ala-D-Ala_dipeptidase_Aad, D-Ala-D-Ala dipeptidase (includes Lactobacillus plantarum Aad peptidase). D-Ala-D-Ala dipeptidase (also known as D-alanyl-D-alanine dipeptidase vanX; VanX; EC 3.4.13.22) is a Zn2+-dependent enzyme that mediates resistance to the antibiotic vancomycin in Enterococci and other bacteria (both Gram-positive and Gram-negative). It is part of a gene cluster that affects cell-wall biosynthesis. The operon triggers the termination of peptidoglycan precursors by D-Ala-(R)-lactate instead of D-Ala-D-Ala dipeptides. The enzyme is stereospecific, as L-Ala-L-Ala, D-Ala-L-Ala and L-Ala-D-Ala are not substrates. This subfamily includes Lactobacillus Aad peptidase and belongs in the MEROPS peptidase family M15, subfamily D.	1.24332e-97
NC_013162.1|WP_009411859.1|2547485_2548850_-|DNA-repair-protein-RadA	gnl|CDD|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NC_013162.1|WP_041546862.1|2544174_2545332_+|ABC-transporter-permease	gnl|CDD|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	2.23075e-44
NC_013162.1|WP_015783085.1|2541580_2542165_+|porin-family-protein	gnl|CDD|379226	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	4.23127e-19
NC_013162.1|WP_041546965.1|2551806_2552985_+|glycoside-hydrolase-family-6-protein	gnl|CDD|376532	pfam01341, Glyco_hydro_6, Glycosyl hydrolases family 6.	9.62912e-47
NC_013162.1|WP_041546858.1|2542417_2542696_-|hypothetical-protein	gnl|CDD|236766	PRK10811, rne, ribonuclease E; Reviewed.	0.000172014
NC_013162.1|WP_002672544.1|2556802_2557039_+|50S-ribosomal-protein-L28	gnl|CDD|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	3.46377e-33
NC_013162.1|WP_015783092.1|2550673_2551726_+|glycoside-hydrolase-family-6-protein	gnl|CDD|376532	pfam01341, Glyco_hydro_6, Glycosyl hydrolases family 6.	3.49454e-45
NC_013162.1|WP_002672545.1|2557056_2557239_+|50S-ribosomal-protein-L33	gnl|CDD|177033	CHL00104, rpl33, ribosomal protein L33.	1.09613e-18
NC_013162.1|WP_002672528.1|2545433_2545643_+|DUF2892-domain-containing-protein	gnl|CDD|378561	pfam11127, DUF2892, Protein of unknown function (DUF2892). This family is conserved in bacteria. The function is not known.	1.00412e-08
NC_013162.1|WP_015783089.1|2545648_2546068_+|rRNA-maturation-RNase-YbeY	gnl|CDD|376735	pfam02130, UPF0054, Uncharacterized protein family UPF0054.	2.13285e-31
NC_013162.1|WP_015783090.1|2546054_2547473_-|oligosaccharide-flippase-family-protein	gnl|CDD|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.15895e-30
NC_013162.1|WP_002672507.1|2540787_2541441_-|uracil-phosphoribosyltransferase	gnl|CDD|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	1.85024e-83
NC_013162.1|WP_009410605.1|2553736_2554192_+|SsrA-binding-protein-SmpB	gnl|CDD|376590	pfam01668, SmpB, SmpB protein.	1.7036e-70
NC_013162.1|WP_041546860.1|2542868_2544191_-|DUF1343-domain-containing-protein	gnl|CDD|377768	pfam07075, DUF1343, Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.	0
NC_013162.1|WP_015783096.1|2554919_2556116_-|diaminopimelate-decarboxylase	gnl|CDD|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	6.38846e-163

Protein sequences

>NC_013162.1|WP_015783091.1|2548947_2549829_-|glucose-1-phosphate-thymidylyltransferase-RfbA
MKGIILAGGSGTRLYPITKGVSKQLLPIYDKPMIYYPLSVLMLSGIREVLVISTPQDLPGFERLLGDGSDFGIRLSYAEQPSPDGLAQAFIIGEEFIGDDDVCLVLGDNIFYGQSFSKMLAQAVENVKKEHKATVFGYYVKDPERYGVAEFDTAGNVLSIEEKPTQPKSNYAVVGLYFYPNKVVKVAKSIKPSARGELEITTVNQEFLNDGELKVQLLGRGFAWLDTGTHDSLSEASNFVETLEKRQGLKISCLEEIAYRKGWITAEKLQELAKPMLKNQYGQYLLQLTMNNR
>NC_013162.1|WP_009411859.1|2547485_2548850_-|DNA-repair-protein-RadA
MAKLKTAYFCQNCGAQYSKWQGQCYVCKQWNTIVEEVVQKDTAPAWQEKESPIKSKAPKYISISQIDTQQEARLNSNNHELNNVLGGGIVPGSVTLLGGEPGIGKSTLLLQIALNLPYRTLYVSGEESEKQIKMRADRIPHKLDNCFILTETKTQNIFQQIKELLPEIVIIDSIQTLQSDYIEASAGSISQIRECASELIKFAKTTHTPVILIGHITKDGQIAGPKILEHMVDTVLQFEGDRNHVYRILRSLKNRFGSTSELGIYEMLSNGLREVNNPSEILISKTDETISGTSIAATLEGMRPLMIEIQALVSTAVYGTPQRSTTGFNAKRLNMLLAVLEKRAGFRLGAKDVFLNITGGITIDDPATDLGVAMAILSSNEDIAIEKDVCFAGEVGLGGEIRPVQRVEQRITEAEKLGFNTIFVSKYNKIALKNTKIRIVKVAKIEDAIQELFG
>NC_013162.1|WP_015783090.1|2546054_2547473_-|oligosaccharide-flippase-family-protein
MLKKLFKDTIIYGIATVLPRVLTLLLTRLYVNKLDTADFGIYSGLFVYLILGNVLLSYGMETAFFRFMNKGERKKKVQSTALTSLTVSSLFFLLIAYLLRHFIASWLNYDVQYIVFAIYILVLDALVVIPFAWLRNKGKAKLYAIVKIGNTAVNLALNIYYLNYLPAETLATNGGVYYIFLANVIASLATFIVLLPIYFKIHFRFDYRLWKEMMIYAFPVLLAGIAFAVNEGFDRVFLRMLLPADTADGTIGIYSACYKMGVFMNLFVTAYKLGIEPFFFSSAQDKNAPKTYARITEYFIVCGGFILLFITVFTDVFKLILIPNKAYWEALWIVPIILLANLCLGIYHSLSVWYKVTDRTSFGAIVSLVGMAITVVFNFALIPWLSYKGAALATLITYGAMMFISYYYGQKYYPIPYKKRKIKIFLGMSVVFSFVNFYAFDNSIYIGTLLLLIYGYLASFTIKLKSTLPKQP
>NC_013162.1|WP_015783089.1|2545648_2546068_+|rRNA-maturation-RNase-YbeY
MTSFFNETPFVFPFKKNEVKRWVKRVAQSEGKEVGNINYIFCDDEYLHKINVEYLQHDTLTDIITFDYSEGKVLHSDIYISVERVKENANIFKVPFQRELLRVLAHGLLHLCGYKDKTPEDSALMRNKEEEKMNLFTVV
>NC_013162.1|WP_002672528.1|2545433_2545643_+|DUF2892-domain-containing-protein
MKRNISTLDKNIRLLIIVITAILGYFNEFSITIASVLSGVSILLLVTILINFSPIYALLGISTYKPKEK
>NC_013162.1|WP_041546862.1|2544174_2545332_+|ABC-transporter-permease
MAIAAIAVGMVMMLIAIATGIGLQRKIREKLVVFHGHIQIFDYSNNISEVSTKPIKLQQDFYPTFSAVPEVTHIQAVATKGGIIRTETTYESILAKGVGKDYNWSLIRDFITEGRTPNVASEEVTDEVLMSTYLANRLHLKLGDRCQAIFLKDEAAQAPNQRSFKIVGLYNSGFQEFDASYVFTDIRHIQKINKWQPDQIGNFELFIKDFDRIEEVGKQVYGKVGSFLDSQTIIQKFPFIFEWLGMFDFNIYLIIGIMIVVGGFNMITAILVLILEKTPMIGTLKSLGASDRSIRKIFLYNATYIIGLGLLWGNVLGFLLLWLQQRYSLIKLDPATYYVTEVPIAFTPLWVLLLNIGVLLLCLLMLLIPTYVITKISPTKSMKFA
>NC_013162.1|WP_041546860.1|2542868_2544191_-|DUF1343-domain-containing-protein
MAAIAILIIGEEIVPLSPFEKITLFAMKYSTFKTIMPFRSAKVTLFFLCTLISCKNNGQTQGNASVQNTEKQTKEVVVGANRMYLYIKDLRAKNIAIVTNQTGIVKAEKGNYVHLVDTLLKKKVSISKVFAPEHGFRGEADAGEVVKDGKDSKTGLPIVSLYGKNKKPTAEQLKGVDLVLFDLQDVGVRFYTYISTLHYVMEACAEQHIPVIVLDRPNPNAHYIDGAVLQPAFKSFIGMHPVPVVYGMTIGEYAQMINGEKWLQAGVTADLKVIPLAYYTHQTSYSLPVKPSPNLPNDVSVNLYPSLCFFEGTNVSMGRGTDMQFQIYGSPYFDKTAFSFTPHPNAGDKNPKFNGELCYGEDLRKTPRLDKLNLTWLKKAFEQGKGVKTPFFTSSFNKIAGNDILKKQISEGKTEDEIRQSWKKDIEQFKEMRKKYLLYP
>NC_013162.1|WP_041546858.1|2542417_2542696_-|hypothetical-protein
MRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKNEQRTNKERTKNEQRTNKERTKNEQKAEEKWG
>NC_013162.1|WP_015783085.1|2541580_2542165_+|porin-family-protein
MKNKITKLTAFIAIMLLTTATYAQEFHLGAKAGANLGKVEGVAYDKNFKLGYQLGGFVEFDFNDSWGLQGEVLFSQTNTELRDSYQSVWNDKFEKKKTLNYVSVPVLFKYNPNGLISLHAGPQFSFLANRDQSTWENGEKLFKDTDFSLVAGAEVNLGPLFAYGRYVWGYSDISNALKEKATTQQIQLGVGVRF
>NC_013162.1|WP_002672507.1|2540787_2541441_-|uracil-phosphoribosyltransferase
MIIHHLGEEPSVLNRFIAQLRDVNIQADRMRFRKNLERIGEVLCYEMSKFLHYKTETITTPLGEKKVQLPKDEIVICSILRAGLALHQGLMNYFDNADNAFISAYRKHTSETDFDIMVEYLASPSLEGKILFLADPMLATGRSFANVFNALKPLGTPKEIHLFAVIGAQQGIEYLEDKFPETTHLWIATIDAHLNDHGYIVPGLGDAGDLAFGNKME
>NC_013162.1|WP_015783092.1|2550673_2551726_+|glycoside-hydrolase-family-6-protein
MKKLLALIAFLWVMTACEKSGEDTPKNTQTQIPYDWDFYLKPSRLYAVKNEKNAELKKLYYQVYGTPCGDWYDGINPNSKDSDLYLKNFVEGAEHARKTPIVVIYGIPNRDCGSFSKGGHPNAASYRAWIDRVSAIIGKRRAVVIIEPDAINYCRHKKGSAEYKERADLLTYCARKLKENNPNVASYIHAGNSVLVTQHPEAVANAIIDGGLQYMRGFALNVSGLGGTAEEQAGAEKFVTYLASKGFKDVHYVIDTGRSGINRPKHQNANAPYNSCNNFNAALGPRSTTKTTGAHADAYLWINGGGGSDGECNMGAPAAGDPYPEYTRHLVQNAMRVKSIEILEVPQNLK
>NC_013162.1|WP_041546965.1|2551806_2552985_+|glycoside-hydrolase-family-6-protein
MNKLLSLVAFLWVMTACEKSGEESDPSTQTPTTQTSTTQTPTTQTPTTPPITPPVTPPIPPNPPQGKKPVAYDWDFYLEPSRLDVVKNEKNAELKKLYYQVYGTPCGGWYDGGVSPGSGGKEKNDRWLKNFVEGAERARKTPIVVLYGIPNRDCGSFSKGGHPNAASYKEWIDRVSAIIGQRRAVVIIEPDAINYCGHPRGSAKYNERAELLNYAAEKLNKNNPNVVSYIHAGNSDLVTKHPEAVANAIIDGGLKYMRGFALNVSGLGGTAEEQAGAERFVTYLASKGFKDVHYVIDTGRSGINRPKHQNANAPYNSCNNFNAALGPRSTTKTTGAHADAYLWINGGGGSDGECNMGAPAAGKPYPEYTRHLVQNAMRVKSIEILEVPQNLK
>NC_013162.1|WP_015783094.1|2553056_2553659_-|M15-family-metallopeptidase
MKYLLQLFILLSVSSLLAQQNDFVLLRSLSNDFVFDMKYATPDNFLKQAVYDCGECYLRKSTAKALVKANEEFKSLGYRIKLFDCYRPLSVQKKMWKILPGTHYVANPAKGSKHNRGAAVDLTLVDAQGKELDMGTPFDFFGKKAHHTCTTLPKKVLENRKLLKGVLNKYNFKSIFSEWWHYEYRPEMQSKVEDFQWQCK
>NC_013162.1|WP_009410605.1|2553736_2554192_+|SsrA-binding-protein-SmpB
MIQKTVQILNKRAKFEYEILDKYTAGIVLVGTEIKSIRMGKASIAESFCEFNDKGELFVINSTIEAYDFGTYYNHRPKSERKLLLQKKELRKLNKEVKNSGLTIVPLKLFINEKGLAKMDIALVRGKKLYDKRETIKDRDNKRNLDRLMKK
>NC_013162.1|WP_015783095.1|2554267_2554750_+|hypothetical-protein
MYRDFKELPDDARVWVYQCNRSFTEEEQKQLHTQLEEFINHWMVHGKDLLSSFELRYNRFIVIGALPDAHGVGGCSLDALAHFIQELEAQYNVTLLDRMNVSYRQGEHIAYKNLADFKKMVKEKAVSAQTIVFNNLVNTKIECEENWEVPLEDSWHNRFL
>NC_013162.1|WP_015783096.1|2554919_2556116_-|diaminopimelate-decarboxylase
MKINDLLNIANTYGSPVYVYDAQKIASQYNRLTNAFASVPKLRINYAMKALSNISILKLMKDLGAGLDTVSIQEVQLGLLAGFDPQQIIFTPNGVSMDEIEEAMRLGVQLNIDNLSFLEQFGTQHPEIPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHMHTGSDILDIDVFLYAAEILFETAKHFKDLQFIDFGSGFKVPYKEGDIQTNIEELGERLSSRFADFCKEYGRNLTLAFEPGKFLVSEAGYFLVKVNVVKQTTSTVFAGIDSGFNHLIRPMFYGANHYIENISNPEGKNRFYSVVGYICETDTFASNRQIAEITEGDILCFHNAGAYCYTMASNYNSRLRPAEVLWQNGEAKLIRKAETFEDLLRGQIY
>NC_013162.1|WP_015783097.1|2556172_2556325_+|hypothetical-protein
MANNINNTRNANNTKLMTNDGVSHTGGCEPHGQIKLVNESISKLANGVGE
>NC_013162.1|WP_015783098.1|2556365_2556545_+|hypothetical-protein
MINLGEAYRKDEQKTVRATQAVVARQADNEKTNKRRTKDEQKTNKRRTMNEEKINLRWK
>NC_013162.1|WP_002672544.1|2556802_2557039_+|50S-ribosomal-protein-L28
MARVCDLTGKKALVGNNVSHAMNKTKRKFNVNLRTKRFFIPEENRWITLKVSATAIKTIDKKGIYAVLKEVERNGYIN
>NC_013162.1|WP_002672545.1|2557056_2557239_+|50S-ribosomal-protein-L33
MAKKGNRIQVILECTEHKESGLPGTSRYITTKNKKNTPDRLELKKFNPILKKVTVHKEIK

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	131253-131275	0	1.0
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	131264-131286	0	1.0
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	131275-131297	0	1.0
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	131286-131308	0	1.0
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	131297-131319	0	1.0
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2455440-2455462	0	1.0
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2455473-2455495	0	1.0
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2455528-2455550	0	1.0
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2455539-2455561	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	272357-272378	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	272368-272389	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	272379-272400	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	272390-272411	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	272401-272422	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	272412-272433	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	272423-272444	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	1889916-1889937	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	1981644-1981665	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	2080148-2080169	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	2236648-2236669	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	2236659-2236680	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	2236670-2236691	0	1.0
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	2236681-2236702	0	1.0
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	131253-131272	0	1.0
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	131264-131283	0	1.0
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	131275-131294	0	1.0
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	131286-131305	0	1.0
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	131297-131316	0	1.0
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2080126-2080145	0	1.0
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2455440-2455459	0	1.0
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2455473-2455492	0	1.0
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2455528-2455547	0	1.0
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2455539-2455558	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	316-335	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	327-346	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36535-36554	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36546-36565	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36557-36576	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36568-36587	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36579-36598	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36590-36609	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36601-36620	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36612-36631	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36623-36642	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36634-36653	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	52107-52126	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	52118-52137	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	52129-52148	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	52140-52159	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	52151-52170	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	82793-82812	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	82804-82823	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	82815-82834	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	82826-82845	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	111492-111511	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	131319-131338	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	160018-160037	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	184828-184847	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213625-213644	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213636-213655	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213647-213666	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213658-213677	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213669-213688	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213680-213699	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213691-213710	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213702-213721	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213713-213732	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213724-213743	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213735-213754	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213746-213765	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213757-213776	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213768-213787	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213779-213798	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213790-213809	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213801-213820	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213812-213831	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213845-213864	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213856-213875	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213867-213886	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213878-213897	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213889-213908	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213900-213919	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213911-213930	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213922-213941	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213955-213974	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343527-343546	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343538-343557	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343549-343568	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343582-343601	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	355117-355136	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	1746094-1746113	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	1746105-1746124	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	1746116-1746135	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	1746127-1746146	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	1746138-1746157	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	1746149-1746168	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2001857-2001876	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2001868-2001887	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2001901-2001920	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2001912-2001931	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2001923-2001942	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2001934-2001953	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2001945-2001964	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2001956-2001975	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2025319-2025338	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2053764-2053783	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2071747-2071766	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2080104-2080123	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2145230-2145249	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2163708-2163727	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2163719-2163738	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2163730-2163749	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2163741-2163760	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2163752-2163771	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2163763-2163782	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2163774-2163793	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2192477-2192496	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2201675-2201694	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2201686-2201705	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2201697-2201716	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2201708-2201727	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361671-2361690	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361682-2361701	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361693-2361712	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361704-2361723	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361715-2361734	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361726-2361745	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361737-2361756	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361748-2361767	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361759-2361778	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361770-2361789	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361781-2361800	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361792-2361811	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361803-2361822	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361814-2361833	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361825-2361844	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2361836-2361855	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2398490-2398509	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2398501-2398520	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2398512-2398531	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2407641-2407660	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2407652-2407671	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2407663-2407682	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2407674-2407693	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2407685-2407704	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2428354-2428373	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2455495-2455514	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2455506-2455525	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479459-2479478	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479470-2479489	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479481-2479500	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479492-2479511	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479503-2479522	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479514-2479533	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479525-2479544	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479536-2479555	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479547-2479566	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479558-2479577	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479569-2479588	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479580-2479599	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479591-2479610	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479602-2479621	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479613-2479632	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479624-2479643	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479635-2479654	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479646-2479665	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479657-2479676	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479668-2479687	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479679-2479698	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479690-2479709	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479701-2479720	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479712-2479731	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479723-2479742	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479734-2479753	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479745-2479764	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479756-2479775	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479789-2479808	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2527713-2527732	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2527812-2527831	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2527911-2527930	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542524-2542543	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542535-2542554	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542546-2542565	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542557-2542576	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542568-2542587	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542579-2542598	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542590-2542609	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542601-2542620	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542612-2542631	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542623-2542642	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542634-2542653	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542645-2542664	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542656-2542675	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542667-2542686	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2556464-2556483	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2556475-2556494	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2556486-2556505	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2594088-2594107	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2594099-2594118	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2594110-2594129	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2594121-2594140	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2594132-2594151	0	1.0
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2594143-2594162	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	36480-36499	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	82771-82790	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	131220-131239	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	1605673-1605692	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	1946477-1946496	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2001813-2001832	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2002033-2002052	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2080005-2080024	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2181411-2181430	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2192334-2192353	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2346033-2346052	0	1.0
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2550346-2550365	0	1.0
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	2079997-2080028	0	1.0
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	52089-52115	0	1.0
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	82775-82801	0	1.0
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2181415-2181441	0	1.0
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2192323-2192349	0	1.0
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2192378-2192404	0	1.0
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2593916-2593942	0	1.0
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	343557-343579	1	0.957
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2080093-2080115	1	0.957
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2407693-2407715	1	0.957
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2527702-2527724	1	0.957
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2527801-2527823	1	0.957
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2527900-2527922	1	0.957
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	272434-272455	1	0.955
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2080137-2080156	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	160062-160081	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	160106-160125	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343516-343535	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343560-343579	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	355106-355125	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2053775-2053794	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2080027-2080046	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2080093-2080112	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2181345-2181364	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2398523-2398542	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2407630-2407649	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2407696-2407715	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2407707-2407726	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2407751-2407770	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2527702-2527721	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2527801-2527820	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2527900-2527919	1	0.95
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2550291-2550310	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	283-302	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	111536-111555	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	160040-160059	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	213603-213622	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	1226122-1226141	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2002000-2002019	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2163796-2163815	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2345989-2346008	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2422970-2422989	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2428332-2428351	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2462682-2462701	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2479437-2479456	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2527636-2527655	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2527735-2527754	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2527834-2527853	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2527933-2527952	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2569960-2569979	1	0.95
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2602939-2602958	1	0.95
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	160036-160067	1	0.969
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	213595-213626	1	0.969
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	2001996-2002027	1	0.969
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	2428324-2428355	1	0.969
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	2462674-2462705	1	0.969
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	2527727-2527758	1	0.969
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	2527826-2527857	1	0.969
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	2527925-2527956	1	0.969
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	272-298	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	131209-131235	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	160044-160070	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	213999-214025	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	354985-355011	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	355282-355308	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	1816377-1816403	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2001817-2001843	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2002004-2002030	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2002037-2002063	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2163785-2163811	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2192268-2192294	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2346022-2346048	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2398534-2398560	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2422974-2423000	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2428321-2428347	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2455638-2455664	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2462671-2462697	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2462715-2462741	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2479441-2479467	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2511832-2511858	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2527724-2527750	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2527823-2527849	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2527922-2527948	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2550335-2550361	1	0.963
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2569949-2569975	1	0.963
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	316-338	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	327-349	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	36532-36554	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	36543-36565	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	36554-36576	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	36565-36587	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	36576-36598	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	36587-36609	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	36598-36620	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	36609-36631	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	36620-36642	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	36631-36653	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	52115-52137	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	52126-52148	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	52137-52159	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	52148-52170	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	82801-82823	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	82812-82834	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	82823-82845	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	111489-111511	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	131319-131341	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	160015-160037	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213625-213647	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213636-213658	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213647-213669	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213658-213680	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213669-213691	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213680-213702	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213691-213713	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213702-213724	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213713-213735	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213724-213746	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213735-213757	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213746-213768	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213757-213779	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213768-213790	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213779-213801	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213790-213812	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213801-213823	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213812-213834	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213845-213867	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213856-213878	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213867-213889	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213878-213900	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213889-213911	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213900-213922	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213911-213933	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213922-213944	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	213955-213977	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	343469-343491	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	343480-343502	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	343491-343513	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	343502-343524	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	343524-343546	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	343535-343557	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	343546-343568	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	343579-343601	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	355117-355139	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	1746094-1746116	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	1746105-1746127	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	1746116-1746138	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	1746127-1746149	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	1746138-1746160	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	1746149-1746171	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2001865-2001887	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2001909-2001931	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2001920-2001942	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2001931-2001953	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2001942-2001964	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2001953-2001975	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2025319-2025341	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2053761-2053783	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2080049-2080071	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2080060-2080082	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2080104-2080126	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2163708-2163730	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2163719-2163741	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2163730-2163752	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2163741-2163763	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2163752-2163774	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2163763-2163785	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2181331-2181353	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2192477-2192499	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2201683-2201705	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2201694-2201716	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2201705-2201727	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346077-2346099	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346088-2346110	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346099-2346121	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346110-2346132	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346121-2346143	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346132-2346154	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346143-2346165	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346154-2346176	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346165-2346187	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346176-2346198	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346187-2346209	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346198-2346220	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2346209-2346231	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361671-2361693	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361682-2361704	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361693-2361715	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361704-2361726	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361715-2361737	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361726-2361748	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361737-2361759	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361748-2361770	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361759-2361781	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361770-2361792	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361781-2361803	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361792-2361814	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361803-2361825	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361814-2361836	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361825-2361847	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2361836-2361858	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2398490-2398512	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2398501-2398523	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2398512-2398534	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2407638-2407660	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2407649-2407671	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2407660-2407682	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2407671-2407693	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2407682-2407704	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2455495-2455517	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2455506-2455528	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2455561-2455583	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2455572-2455594	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2455583-2455605	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2455594-2455616	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2455605-2455627	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2455616-2455638	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2462748-2462770	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2462759-2462781	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2462770-2462792	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2462781-2462803	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2462792-2462814	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2462803-2462825	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2462814-2462836	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2462847-2462869	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479467-2479489	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479478-2479500	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479489-2479511	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479500-2479522	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479511-2479533	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479522-2479544	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479533-2479555	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479544-2479566	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479555-2479577	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479566-2479588	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479577-2479599	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479588-2479610	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479599-2479621	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479610-2479632	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479621-2479643	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479632-2479654	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479643-2479665	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479654-2479676	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479665-2479687	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479676-2479698	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479687-2479709	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479698-2479720	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479709-2479731	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479720-2479742	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479731-2479753	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479742-2479764	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2479753-2479775	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2527691-2527713	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2527790-2527812	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2527889-2527911	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542521-2542543	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542532-2542554	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542543-2542565	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542554-2542576	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542565-2542587	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542576-2542598	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542587-2542609	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542598-2542620	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542609-2542631	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542620-2542642	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542631-2542653	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542642-2542664	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542653-2542675	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2542664-2542686	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2556464-2556486	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2556475-2556497	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2556486-2556508	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2561269-2561291	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2561280-2561302	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2561291-2561313	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2570015-2570037	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2594085-2594107	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2594096-2594118	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2594107-2594129	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2594118-2594140	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2594129-2594151	2	0.913
NC_013162_1	1.1|22592|23|NC_013162|CRT	22592-22614	23	NC_013162.1	2594140-2594162	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	228-250	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	239-261	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	250-272	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	36510-36532	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	355315-355337	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	355337-355359	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	1946510-1946532	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2181364-2181386	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2423000-2423022	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2423011-2423033	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2423022-2423044	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2423033-2423055	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2423044-2423066	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2423055-2423077	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2542444-2542466	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2542455-2542477	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2542466-2542488	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2542477-2542499	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2542488-2542510	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2542499-2542521	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2602848-2602870	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2602859-2602881	2	0.913
NC_013162_1	1.3|22713|23|NC_013162|CRT	22713-22735	23	NC_013162.1	2602870-2602892	2	0.913
NC_013162_12	12.1|1981512|19|NC_013162|CRISPRCasFinder	1981512-1981530	19	NC_013162.1	355040-355058	2	0.895
NC_013162_12	12.1|1981512|19|NC_013162|CRISPRCasFinder	1981512-1981530	19	NC_013162.1	355062-355080	2	0.895
NC_013162_12	12.1|1981512|19|NC_013162|CRISPRCasFinder	1981512-1981530	19	NC_013162.1	355084-355102	2	0.895
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	272445-272466	2	0.909
NC_013162_12	12.3|1981611|22|NC_013162|CRISPRCasFinder	1981611-1981632	22	NC_013162.1	272456-272477	2	0.909
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	228-247	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	239-258	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	250-269	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	36502-36521	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	36513-36532	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	355271-355290	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	355315-355334	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	355326-355345	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	355337-355356	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	1946510-1946529	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2181367-2181386	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2236637-2236656	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2423003-2423022	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2423014-2423033	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2423025-2423044	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2423036-2423055	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2423047-2423066	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2423058-2423077	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2542447-2542466	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2542458-2542477	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2542469-2542488	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2542480-2542499	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2542491-2542510	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2542502-2542521	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2602851-2602870	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2602862-2602881	2	0.9
NC_013162_13	13.1|2108519|20|NC_013162|CRISPRCasFinder	2108519-2108538	20	NC_013162.1	2602873-2602892	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	261-280	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	360-379	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	382-401	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	36524-36543	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	111481-111500	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	213988-214007	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	293601-293620	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343461-343480	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343472-343491	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343483-343502	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343494-343513	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	343505-343524	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	355018-355037	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	1620315-1620334	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	1746171-1746190	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	1946499-1946518	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2080049-2080068	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2080060-2080079	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2080071-2080090	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2181334-2181353	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2181356-2181375	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2181378-2181397	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2192455-2192474	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2192466-2192485	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346077-2346096	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346088-2346107	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346099-2346118	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346110-2346129	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346121-2346140	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346132-2346151	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346143-2346162	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346154-2346173	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346165-2346184	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346176-2346195	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346187-2346206	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346198-2346217	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346209-2346228	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2346220-2346239	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2422992-2423011	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2428365-2428384	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2428387-2428406	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2455561-2455580	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2455572-2455591	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2455583-2455602	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2455594-2455613	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2455605-2455624	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2455616-2455635	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2455627-2455646	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2462748-2462767	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2462759-2462778	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2462770-2462789	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2462781-2462800	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2462792-2462811	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2462803-2462822	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2462814-2462833	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2462847-2462866	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2479778-2479797	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2486422-2486441	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2527691-2527710	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2527790-2527809	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2527889-2527908	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2542513-2542532	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2550324-2550343	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2561261-2561280	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2561272-2561291	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2561283-2561302	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2561294-2561313	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2570015-2570034	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2570026-2570045	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2594077-2594096	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2602840-2602859	2	0.9
NC_013162_13	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	NC_013162.1	2602884-2602903	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	22537-22556	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	82859-82878	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	160084-160103	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	160128-160147	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	776435-776454	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	776490-776509	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	1493106-1493125	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	1891141-1891160	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2346242-2346261	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2407849-2407868	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2542293-2542312	2	0.9
NC_013162_13	13.3|2108607|20|NC_013162|CRISPRCasFinder	2108607-2108626	20	NC_013162.1	2593868-2593887	2	0.9
NC_013162_13	13.4|2108651|20|NC_013162|CRISPRCasFinder	2108651-2108670	20	NC_013162.1	272447-272466	2	0.9
NC_013162_13	13.4|2108651|20|NC_013162|CRISPRCasFinder	2108651-2108670	20	NC_013162.1	272458-272477	2	0.9
NC_013162_13	13.4|2108651|20|NC_013162|CRISPRCasFinder	2108651-2108670	20	NC_013162.1	2407729-2407748	2	0.9
NC_013162_13	13.4|2108651|20|NC_013162|CRISPRCasFinder	2108651-2108670	20	NC_013162.1	2407740-2407759	2	0.9
NC_013162_13	13.4|2108651|20|NC_013162|CRISPRCasFinder	2108651-2108670	20	NC_013162.1	2428376-2428395	2	0.9
NC_013162_13	13.4|2108651|20|NC_013162|CRISPRCasFinder	2108651-2108670	20	NC_013162.1	2527669-2527688	2	0.9
NC_013162_13	13.4|2108651|20|NC_013162|CRISPRCasFinder	2108651-2108670	20	NC_013162.1	2527768-2527787	2	0.9
NC_013162_13	13.4|2108651|20|NC_013162|CRISPRCasFinder	2108651-2108670	20	NC_013162.1	2527867-2527886	2	0.9
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	52081-52112	2	0.938
NC_013162_15	15.2|2511682|32|NC_013162|CRISPRCasFinder	2511682-2511713	32	NC_013162.1	160080-160111	2	0.938
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	36484-36510	2	0.926
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	160088-160114	2	0.926
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2398578-2398604	2	0.926
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2407612-2407638	2	0.926
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2455682-2455708	2	0.926
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2455726-2455752	2	0.926
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2542297-2542323	2	0.926
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2556402-2556428	2	0.926
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NC_013162.1	2561243-2561269	2	0.926

1. spacer 1.3|22713|23|NC_013162|CRT matches to position: 131253-131275, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacgaac	CRISPR spacer
caatgaacgaacaatgaacgaac	Protospacer
***********************

2. spacer 1.3|22713|23|NC_013162|CRT matches to position: 131264-131286, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacgaac	CRISPR spacer
caatgaacgaacaatgaacgaac	Protospacer
***********************

3. spacer 1.3|22713|23|NC_013162|CRT matches to position: 131275-131297, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacgaac	CRISPR spacer
caatgaacgaacaatgaacgaac	Protospacer
***********************

4. spacer 1.3|22713|23|NC_013162|CRT matches to position: 131286-131308, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacgaac	CRISPR spacer
caatgaacgaacaatgaacgaac	Protospacer
***********************

5. spacer 1.3|22713|23|NC_013162|CRT matches to position: 131297-131319, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacgaac	CRISPR spacer
caatgaacgaacaatgaacgaac	Protospacer
***********************

6. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2455440-2455462, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacgaac	CRISPR spacer
caatgaacgaacaatgaacgaac	Protospacer
***********************

7. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2455473-2455495, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacgaac	CRISPR spacer
caatgaacgaacaatgaacgaac	Protospacer
***********************

8. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2455528-2455550, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacgaac	CRISPR spacer
caatgaacgaacaatgaacgaac	Protospacer
***********************

9. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2455539-2455561, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacgaac	CRISPR spacer
caatgaacgaacaatgaacgaac	Protospacer
***********************

10. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 272357-272378, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

11. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 272368-272389, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

12. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 272379-272400, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

13. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 272390-272411, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

14. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 272401-272422, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

15. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 272412-272433, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

16. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 272423-272444, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

17. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 1889916-1889937, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

18. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 1981644-1981665, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

19. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 2080148-2080169, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

20. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 2236648-2236669, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

21. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 2236659-2236680, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

22. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 2236670-2236691, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

23. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 2236681-2236702, mismatch: 0, identity: 1.0

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatgaacgaagaatgaacgaa	Protospacer
**********************

24. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 131253-131272, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaatgaacg	Protospacer
********************

25. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 131264-131283, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaatgaacg	Protospacer
********************

26. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 131275-131294, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaatgaacg	Protospacer
********************

27. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 131286-131305, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaatgaacg	Protospacer
********************

28. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 131297-131316, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaatgaacg	Protospacer
********************

29. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2080126-2080145, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaatgaacg	Protospacer
********************

30. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2455440-2455459, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaatgaacg	Protospacer
********************

31. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2455473-2455492, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaatgaacg	Protospacer
********************

32. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2455528-2455547, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaatgaacg	Protospacer
********************

33. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2455539-2455558, mismatch: 0, identity: 1.0

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaatgaacg	Protospacer
********************

34. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 316-335, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

35. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 327-346, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

36. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36535-36554, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

37. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36546-36565, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

38. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36557-36576, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

39. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36568-36587, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

40. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36579-36598, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

41. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36590-36609, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

42. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36601-36620, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

43. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36612-36631, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

44. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36623-36642, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

45. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36634-36653, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

46. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 52107-52126, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

47. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 52118-52137, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

48. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 52129-52148, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

49. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 52140-52159, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

50. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 52151-52170, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

51. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 82793-82812, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

52. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 82804-82823, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

53. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 82815-82834, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

54. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 82826-82845, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

55. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 111492-111511, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

56. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 131319-131338, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

57. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 160018-160037, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

58. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 184828-184847, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

59. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213625-213644, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

60. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213636-213655, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

61. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213647-213666, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

62. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213658-213677, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

63. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213669-213688, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

64. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213680-213699, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

65. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213691-213710, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

66. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213702-213721, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

67. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213713-213732, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

68. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213724-213743, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

69. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213735-213754, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

70. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213746-213765, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

71. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213757-213776, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

72. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213768-213787, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

73. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213779-213798, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

74. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213790-213809, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

75. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213801-213820, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

76. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213812-213831, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

77. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213845-213864, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

78. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213856-213875, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

79. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213867-213886, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

80. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213878-213897, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

81. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213889-213908, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

82. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213900-213919, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

83. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213911-213930, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

84. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213922-213941, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

85. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213955-213974, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

86. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343527-343546, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

87. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343538-343557, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

88. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343549-343568, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

89. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343582-343601, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

90. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 355117-355136, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

91. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 1746094-1746113, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

92. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 1746105-1746124, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

93. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 1746116-1746135, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

94. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 1746127-1746146, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

95. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 1746138-1746157, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

96. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 1746149-1746168, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

97. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2001857-2001876, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

98. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2001868-2001887, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

99. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2001901-2001920, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

100. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2001912-2001931, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

101. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2001923-2001942, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

102. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2001934-2001953, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

103. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2001945-2001964, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

104. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2001956-2001975, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

105. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2025319-2025338, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

106. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2053764-2053783, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

107. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2071747-2071766, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

108. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2080104-2080123, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

109. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2145230-2145249, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

110. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2163708-2163727, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

111. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2163719-2163738, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

112. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2163730-2163749, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

113. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2163741-2163760, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

114. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2163752-2163771, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

115. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2163763-2163782, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

116. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2163774-2163793, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

117. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2192477-2192496, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

118. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2201675-2201694, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

119. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2201686-2201705, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

120. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2201697-2201716, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

121. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2201708-2201727, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

122. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361671-2361690, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

123. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361682-2361701, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

124. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361693-2361712, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

125. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361704-2361723, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

126. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361715-2361734, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

127. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361726-2361745, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

128. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361737-2361756, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

129. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361748-2361767, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

130. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361759-2361778, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

131. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361770-2361789, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

132. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361781-2361800, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

133. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361792-2361811, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

134. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361803-2361822, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

135. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361814-2361833, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

136. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361825-2361844, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

137. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2361836-2361855, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

138. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2398490-2398509, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

139. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2398501-2398520, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

140. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2398512-2398531, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

141. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2407641-2407660, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

142. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2407652-2407671, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

143. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2407663-2407682, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

144. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2407674-2407693, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

145. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2407685-2407704, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

146. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2428354-2428373, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

147. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2455495-2455514, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

148. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2455506-2455525, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

149. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479459-2479478, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

150. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479470-2479489, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

151. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479481-2479500, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

152. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479492-2479511, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

153. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479503-2479522, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

154. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479514-2479533, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

155. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479525-2479544, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

156. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479536-2479555, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

157. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479547-2479566, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

158. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479558-2479577, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

159. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479569-2479588, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

160. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479580-2479599, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

161. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479591-2479610, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

162. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479602-2479621, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

163. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479613-2479632, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

164. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479624-2479643, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

165. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479635-2479654, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

166. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479646-2479665, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

167. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479657-2479676, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

168. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479668-2479687, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

169. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479679-2479698, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

170. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479690-2479709, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

171. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479701-2479720, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

172. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479712-2479731, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

173. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479723-2479742, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

174. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479734-2479753, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

175. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479745-2479764, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

176. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479756-2479775, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

177. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479789-2479808, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

178. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2527713-2527732, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

179. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2527812-2527831, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

180. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2527911-2527930, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

181. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542524-2542543, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

182. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542535-2542554, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

183. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542546-2542565, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

184. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542557-2542576, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

185. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542568-2542587, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

186. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542579-2542598, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

187. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542590-2542609, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

188. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542601-2542620, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

189. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542612-2542631, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

190. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542623-2542642, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

191. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542634-2542653, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

192. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542645-2542664, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

193. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542656-2542675, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

194. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542667-2542686, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

195. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2556464-2556483, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

196. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2556475-2556494, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

197. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2556486-2556505, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

198. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2594088-2594107, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

199. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2594099-2594118, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

200. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2594110-2594129, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

201. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2594121-2594140, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

202. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2594132-2594151, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

203. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2594143-2594162, mismatch: 0, identity: 1.0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

204. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 36480-36499, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

205. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 82771-82790, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

206. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 131220-131239, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

207. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 1605673-1605692, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

208. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 1946477-1946496, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

209. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2001813-2001832, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

210. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2002033-2002052, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

211. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2080005-2080024, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

212. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2181411-2181430, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

213. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2192334-2192353, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

214. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2346033-2346052, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

215. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2550346-2550365, mismatch: 0, identity: 1.0

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagata	Protospacer
********************

216. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 2079997-2080028, mismatch: 0, identity: 1.0

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgtttatctgcccgtgcggctcgcaccgtctt	Protospacer
********************************

217. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 52089-52115, mismatch: 0, identity: 1.0

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacgggca	Protospacer
***************************

218. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 82775-82801, mismatch: 0, identity: 1.0

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacgggca	Protospacer
***************************

219. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2181415-2181441, mismatch: 0, identity: 1.0

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacgggca	Protospacer
***************************

220. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2192323-2192349, mismatch: 0, identity: 1.0

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacgggca	Protospacer
***************************

221. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2192378-2192404, mismatch: 0, identity: 1.0

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacgggca	Protospacer
***************************

222. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2593916-2593942, mismatch: 0, identity: 1.0

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacgggca	Protospacer
***************************

223. spacer 1.1|22592|23|NC_013162|CRT matches to position: 343557-343579, mismatch: 1, identity: 0.957

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagatgaacaaaagacgaac	Protospacer
**** ******************

224. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2080093-2080115, mismatch: 1, identity: 0.957

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaaagacgaac	Protospacer
*******.***************

225. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2407693-2407715, mismatch: 1, identity: 0.957

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaaagacgaac	Protospacer
*******.***************

226. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2527702-2527724, mismatch: 1, identity: 0.957

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaaagacgaac	Protospacer
*******.***************

227. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2527801-2527823, mismatch: 1, identity: 0.957

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaaagacgaac	Protospacer
*******.***************

228. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2527900-2527922, mismatch: 1, identity: 0.957

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaaagacgaac	Protospacer
*******.***************

229. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 272434-272455, mismatch: 1, identity: 0.955

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaaagaacgaagaatgaacgaa	Protospacer
*** ******************

230. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2080137-2080156, mismatch: 1, identity: 0.95

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaagaatgaacg	Protospacer
*********** ********

231. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 160062-160081, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacaaacaaaagacg	Protospacer
********.***********

232. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 160106-160125, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacaaacaaaagacg	Protospacer
********.***********

233. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343516-343535, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaatgacg	Protospacer
*************** ****

234. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343560-343579, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagatgaacaaaagacg	Protospacer
*******.************

235. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 355106-355125, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacaaacaaaagacg	Protospacer
********.***********

236. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2053775-2053794, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaaggcgaacaaaagacg	Protospacer
******.*************

237. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2080027-2080046, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaagaaaagacg	Protospacer
*********** ********

238. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2080093-2080112, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaaagacg	Protospacer
**** ***************

239. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2181345-2181364, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaatgacg	Protospacer
*************** ****

240. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2398523-2398542, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaatgacg	Protospacer
*************** ****

241. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2407630-2407649, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaatgacg	Protospacer
*************** ****

242. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2407696-2407715, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaaagacg	Protospacer
**** ***************

243. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2407707-2407726, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaatgacg	Protospacer
*************** ****

244. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2407751-2407770, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaagaaaagacg	Protospacer
*********** ********

245. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2527702-2527721, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaaagacg	Protospacer
**** ***************

246. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2527801-2527820, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaaagacg	Protospacer
**** ***************

247. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2527900-2527919, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaaagacg	Protospacer
**** ***************

248. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2550291-2550310, mismatch: 1, identity: 0.95

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaagaaaagacg	Protospacer
*********** ********

249. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 283-302, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccacacgggcagata	Protospacer
*******.************

250. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 111536-111555, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacaggcagata	Protospacer
***********.********

251. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 160040-160059, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacaggcagata	Protospacer
***********.********

252. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 213603-213622, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgaaccgcacgggcagata	Protospacer
****.***************

253. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 1226122-1226141, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcagtta	Protospacer
***************** **

254. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2002000-2002019, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacaggcagata	Protospacer
***********.********

255. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2163796-2163815, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagtcgcacgggcagata	Protospacer
*****.**************

256. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2345989-2346008, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacaggcagata	Protospacer
***********.********

257. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2422970-2422989, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccacacgggcagata	Protospacer
*******.************

258. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2428332-2428351, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccacacgggcagata	Protospacer
*******.************

259. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2462682-2462701, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccacacgggcagata	Protospacer
*******.************

260. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2479437-2479456, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacggacagata	Protospacer
*************.******

261. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2527636-2527655, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccacacgggcagata	Protospacer
*******.************

262. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2527735-2527754, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccacacgggcagata	Protospacer
*******.************

263. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2527834-2527853, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccacacgggcagata	Protospacer
*******.************

264. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2527933-2527952, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccacacgggcagata	Protospacer
*******.************

265. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2569960-2569979, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgggcaggta	Protospacer
*****************.**

266. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2602939-2602958, mismatch: 1, identity: 0.95

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacgtgcagata	Protospacer
************ *******

267. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 160036-160067, mismatch: 1, identity: 0.969

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgtttatctgcctgtgcggctcgcaccgtctt	Protospacer
************.*******************

268. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 213595-213626, mismatch: 1, identity: 0.969

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgtttatctgcccgtgcggttcgcaccgtctt	Protospacer
*******************.************

269. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 2001996-2002027, mismatch: 1, identity: 0.969

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgtttatctgcctgtgcggctcgcaccgtctt	Protospacer
************.*******************

270. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 2428324-2428355, mismatch: 1, identity: 0.969

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgtttatctgcccgtgtggctcgcaccgtctt	Protospacer
****************.***************

271. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 2462674-2462705, mismatch: 1, identity: 0.969

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgtttatctgcccgtgtggctcgcaccgtctt	Protospacer
****************.***************

272. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 2527727-2527758, mismatch: 1, identity: 0.969

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgtttatctgcccgtgtggctcgcaccgtctt	Protospacer
****************.***************

273. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 2527826-2527857, mismatch: 1, identity: 0.969

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgtttatctgcccgtgtggctcgcaccgtctt	Protospacer
****************.***************

274. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 2527925-2527956, mismatch: 1, identity: 0.969

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgtttatctgcccgtgtggctcgcaccgtctt	Protospacer
****************.***************

275. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 272-298, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccacacgggca	Protospacer
******************.********

276. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 131209-131235, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccgcacgggca	Protospacer
**** **********************

277. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 160044-160070, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacaggca	Protospacer
**********************.****

278. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 213999-214025, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccgcacgggca	Protospacer
**** **********************

279. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 354985-355011, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaaaacggtgcgagccgcacgggca	Protospacer
*****.*********************

280. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 355282-355308, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaaaacggtgcgagccgcacgggca	Protospacer
*****.*********************

281. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 1816377-1816403, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacaggca	Protospacer
**********************.****

282. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2001817-2001843, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccgcacgggca	Protospacer
**** **********************

283. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2002004-2002030, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacaggca	Protospacer
**********************.****

284. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2002037-2002063, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccgcacgggca	Protospacer
**** **********************

285. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2163785-2163811, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagtcgcacgggca	Protospacer
****************.**********

286. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2192268-2192294, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccacacgggca	Protospacer
******************.********

287. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2346022-2346048, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccgcacgggca	Protospacer
**** **********************

288. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2398534-2398560, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccgcacgggca	Protospacer
**** **********************

289. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2422974-2423000, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccacacgggca	Protospacer
******************.********

290. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2428321-2428347, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccacacgggca	Protospacer
******************.********

291. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2455638-2455664, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccgcacgggca	Protospacer
**** **********************

292. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2462671-2462697, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccacacgggca	Protospacer
******************.********

293. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2462715-2462741, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacaggca	Protospacer
**********************.****

294. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2479441-2479467, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacggaca	Protospacer
************************.**

295. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2511832-2511858, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcacaggca	Protospacer
**********************.****

296. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2527724-2527750, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccacacgggca	Protospacer
******************.********

297. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2527823-2527849, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccacacgggca	Protospacer
******************.********

298. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2527922-2527948, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccacacgggca	Protospacer
******************.********

299. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2550335-2550361, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccgcacgggca	Protospacer
**** **********************

300. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2569949-2569975, mismatch: 1, identity: 0.963

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccgcacgggca	Protospacer
**** **********************

301. spacer 1.1|22592|23|NC_013162|CRT matches to position: 316-338, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

302. spacer 1.1|22592|23|NC_013162|CRT matches to position: 327-349, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

303. spacer 1.1|22592|23|NC_013162|CRT matches to position: 36532-36554, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

304. spacer 1.1|22592|23|NC_013162|CRT matches to position: 36543-36565, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

305. spacer 1.1|22592|23|NC_013162|CRT matches to position: 36554-36576, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

306. spacer 1.1|22592|23|NC_013162|CRT matches to position: 36565-36587, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

307. spacer 1.1|22592|23|NC_013162|CRT matches to position: 36576-36598, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

308. spacer 1.1|22592|23|NC_013162|CRT matches to position: 36587-36609, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

309. spacer 1.1|22592|23|NC_013162|CRT matches to position: 36598-36620, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

310. spacer 1.1|22592|23|NC_013162|CRT matches to position: 36609-36631, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

311. spacer 1.1|22592|23|NC_013162|CRT matches to position: 36620-36642, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

312. spacer 1.1|22592|23|NC_013162|CRT matches to position: 36631-36653, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

313. spacer 1.1|22592|23|NC_013162|CRT matches to position: 52115-52137, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

314. spacer 1.1|22592|23|NC_013162|CRT matches to position: 52126-52148, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

315. spacer 1.1|22592|23|NC_013162|CRT matches to position: 52137-52159, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

316. spacer 1.1|22592|23|NC_013162|CRT matches to position: 52148-52170, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

317. spacer 1.1|22592|23|NC_013162|CRT matches to position: 82801-82823, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

318. spacer 1.1|22592|23|NC_013162|CRT matches to position: 82812-82834, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

319. spacer 1.1|22592|23|NC_013162|CRT matches to position: 82823-82845, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

320. spacer 1.1|22592|23|NC_013162|CRT matches to position: 111489-111511, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

321. spacer 1.1|22592|23|NC_013162|CRT matches to position: 131319-131341, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

322. spacer 1.1|22592|23|NC_013162|CRT matches to position: 160015-160037, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

323. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213625-213647, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

324. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213636-213658, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

325. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213647-213669, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

326. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213658-213680, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

327. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213669-213691, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

328. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213680-213702, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

329. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213691-213713, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

330. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213702-213724, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

331. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213713-213735, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

332. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213724-213746, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

333. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213735-213757, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

334. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213746-213768, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

335. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213757-213779, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

336. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213768-213790, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

337. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213779-213801, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

338. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213790-213812, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

339. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213801-213823, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

340. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213812-213834, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

341. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213845-213867, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

342. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213856-213878, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

343. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213867-213889, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

344. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213878-213900, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

345. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213889-213911, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

346. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213900-213922, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

347. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213911-213933, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

348. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213922-213944, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

349. spacer 1.1|22592|23|NC_013162|CRT matches to position: 213955-213977, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

350. spacer 1.1|22592|23|NC_013162|CRT matches to position: 343469-343491, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

351. spacer 1.1|22592|23|NC_013162|CRT matches to position: 343480-343502, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

352. spacer 1.1|22592|23|NC_013162|CRT matches to position: 343491-343513, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

353. spacer 1.1|22592|23|NC_013162|CRT matches to position: 343502-343524, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

354. spacer 1.1|22592|23|NC_013162|CRT matches to position: 343524-343546, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

355. spacer 1.1|22592|23|NC_013162|CRT matches to position: 343535-343557, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

356. spacer 1.1|22592|23|NC_013162|CRT matches to position: 343546-343568, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

357. spacer 1.1|22592|23|NC_013162|CRT matches to position: 343579-343601, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

358. spacer 1.1|22592|23|NC_013162|CRT matches to position: 355117-355139, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

359. spacer 1.1|22592|23|NC_013162|CRT matches to position: 1746094-1746116, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

360. spacer 1.1|22592|23|NC_013162|CRT matches to position: 1746105-1746127, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

361. spacer 1.1|22592|23|NC_013162|CRT matches to position: 1746116-1746138, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

362. spacer 1.1|22592|23|NC_013162|CRT matches to position: 1746127-1746149, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

363. spacer 1.1|22592|23|NC_013162|CRT matches to position: 1746138-1746160, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

364. spacer 1.1|22592|23|NC_013162|CRT matches to position: 1746149-1746171, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

365. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2001865-2001887, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

366. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2001909-2001931, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

367. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2001920-2001942, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

368. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2001931-2001953, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

369. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2001942-2001964, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

370. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2001953-2001975, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

371. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2025319-2025341, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

372. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2053761-2053783, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

373. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2080049-2080071, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

374. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2080060-2080082, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

375. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2080104-2080126, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

376. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2163708-2163730, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

377. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2163719-2163741, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

378. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2163730-2163752, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

379. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2163741-2163763, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

380. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2163752-2163774, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

381. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2163763-2163785, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

382. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2181331-2181353, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

383. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2192477-2192499, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

384. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2201683-2201705, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

385. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2201694-2201716, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

386. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2201705-2201727, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

387. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346077-2346099, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

388. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346088-2346110, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

389. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346099-2346121, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

390. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346110-2346132, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

391. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346121-2346143, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

392. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346132-2346154, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

393. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346143-2346165, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

394. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346154-2346176, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

395. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346165-2346187, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

396. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346176-2346198, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

397. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346187-2346209, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

398. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346198-2346220, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

399. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2346209-2346231, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

400. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361671-2361693, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

401. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361682-2361704, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

402. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361693-2361715, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

403. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361704-2361726, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

404. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361715-2361737, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

405. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361726-2361748, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

406. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361737-2361759, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

407. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361748-2361770, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

408. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361759-2361781, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

409. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361770-2361792, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

410. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361781-2361803, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

411. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361792-2361814, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

412. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361803-2361825, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

413. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361814-2361836, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

414. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361825-2361847, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

415. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2361836-2361858, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

416. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2398490-2398512, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

417. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2398501-2398523, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

418. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2398512-2398534, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

419. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2407638-2407660, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

420. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2407649-2407671, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

421. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2407660-2407682, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

422. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2407671-2407693, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

423. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2407682-2407704, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

424. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2455495-2455517, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

425. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2455506-2455528, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

426. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2455561-2455583, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

427. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2455572-2455594, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

428. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2455583-2455605, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

429. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2455594-2455616, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

430. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2455605-2455627, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

431. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2455616-2455638, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

432. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2462748-2462770, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

433. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2462759-2462781, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

434. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2462770-2462792, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

435. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2462781-2462803, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

436. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2462792-2462814, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

437. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2462803-2462825, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

438. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2462814-2462836, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

439. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2462847-2462869, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

440. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479467-2479489, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

441. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479478-2479500, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

442. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479489-2479511, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

443. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479500-2479522, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

444. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479511-2479533, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

445. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479522-2479544, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

446. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479533-2479555, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

447. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479544-2479566, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

448. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479555-2479577, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

449. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479566-2479588, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

450. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479577-2479599, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

451. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479588-2479610, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

452. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479599-2479621, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

453. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479610-2479632, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

454. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479621-2479643, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

455. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479632-2479654, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

456. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479643-2479665, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

457. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479654-2479676, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

458. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479665-2479687, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

459. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479676-2479698, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

460. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479687-2479709, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

461. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479698-2479720, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

462. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479709-2479731, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

463. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479720-2479742, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

464. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479731-2479753, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

465. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479742-2479764, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

466. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2479753-2479775, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

467. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2527691-2527713, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

468. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2527790-2527812, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

469. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2527889-2527911, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

470. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542521-2542543, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

471. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542532-2542554, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

472. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542543-2542565, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

473. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542554-2542576, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

474. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542565-2542587, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

475. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542576-2542598, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

476. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542587-2542609, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

477. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542598-2542620, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

478. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542609-2542631, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

479. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542620-2542642, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

480. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542631-2542653, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

481. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542642-2542664, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

482. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542653-2542675, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

483. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2542664-2542686, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

484. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2556464-2556486, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

485. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2556475-2556497, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

486. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2556486-2556508, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

487. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2561269-2561291, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

488. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2561280-2561302, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

489. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2561291-2561313, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

490. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2570015-2570037, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaatgacgaacaaatgacgaac	Protospacer
*******.******* *******

491. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2594085-2594107, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

492. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2594096-2594118, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

493. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2594107-2594129, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

494. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2594118-2594140, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

495. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2594129-2594151, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

496. spacer 1.1|22592|23|NC_013162|CRT matches to position: 2594140-2594162, mismatch: 2, identity: 0.913

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

497. spacer 1.3|22713|23|NC_013162|CRT matches to position: 228-250, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

498. spacer 1.3|22713|23|NC_013162|CRT matches to position: 239-261, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

499. spacer 1.3|22713|23|NC_013162|CRT matches to position: 250-272, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

500. spacer 1.3|22713|23|NC_013162|CRT matches to position: 36510-36532, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

501. spacer 1.3|22713|23|NC_013162|CRT matches to position: 355315-355337, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

502. spacer 1.3|22713|23|NC_013162|CRT matches to position: 355337-355359, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caataaacgaagaatgaacgaac	Protospacer
****.****** ***********

503. spacer 1.3|22713|23|NC_013162|CRT matches to position: 1946510-1946532, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

504. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2181364-2181386, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

505. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2423000-2423022, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

506. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2423011-2423033, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

507. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2423022-2423044, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

508. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2423033-2423055, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

509. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2423044-2423066, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

510. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2423055-2423077, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

511. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2542444-2542466, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

512. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2542455-2542477, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

513. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2542466-2542488, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

514. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2542477-2542499, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

515. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2542488-2542510, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

516. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2542499-2542521, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

517. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2602848-2602870, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

518. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2602859-2602881, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

519. spacer 1.3|22713|23|NC_013162|CRT matches to position: 2602870-2602892, mismatch: 2, identity: 0.913

caatgaacgaacaatgaacgaac	CRISPR spacer
caaagaacgaacaaagaacgaac	Protospacer
*** ********** ********

520. spacer 12.1|1981512|19|NC_013162|CRISPRCasFinder matches to position: 355040-355058, mismatch: 2, identity: 0.895

cgatgaacgaaggaaagac	CRISPR spacer
cgatgaacgaacaaaagac	Protospacer
*********** .******

521. spacer 12.1|1981512|19|NC_013162|CRISPRCasFinder matches to position: 355062-355080, mismatch: 2, identity: 0.895

cgatgaacgaaggaaagac	CRISPR spacer
cgatgaacgaacaaaagac	Protospacer
*********** .******

522. spacer 12.1|1981512|19|NC_013162|CRISPRCasFinder matches to position: 355084-355102, mismatch: 2, identity: 0.895

cgatgaacgaaggaaagac	CRISPR spacer
cgatgaacgaacaaaagac	Protospacer
*********** .******

523. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 272445-272466, mismatch: 2, identity: 0.909

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaaagaacgaagaaagaacgaa	Protospacer
*** ********** *******

524. spacer 12.3|1981611|22|NC_013162|CRISPRCasFinder matches to position: 272456-272477, mismatch: 2, identity: 0.909

gaatgaacgaagaatgaacgaa	CRISPR spacer
gaatggacgaagaaagaacgaa	Protospacer
*****.******** *******

525. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 228-247, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

526. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 239-258, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

527. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 250-269, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

528. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 36502-36521, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

529. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 36513-36532, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

530. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 355271-355290, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caatgaacgaacaaaaaacg	Protospacer
************** .****

531. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 355315-355334, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

532. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 355326-355345, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaataaacg	Protospacer
*** ***********.****

533. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 355337-355356, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caataaacgaagaatgaacg	Protospacer
****.****** ********

534. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 1946510-1946529, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

535. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2181367-2181386, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

536. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2236637-2236656, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caataaacgaagaatgaacg	Protospacer
****.****** ********

537. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2423003-2423022, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

538. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2423014-2423033, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

539. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2423025-2423044, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

540. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2423036-2423055, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

541. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2423047-2423066, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

542. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2423058-2423077, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

543. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2542447-2542466, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

544. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2542458-2542477, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

545. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2542469-2542488, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

546. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2542480-2542499, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

547. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2542491-2542510, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

548. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2542502-2542521, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

549. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2602851-2602870, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

550. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2602862-2602881, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

551. spacer 13.1|2108519|20|NC_013162|CRISPRCasFinder matches to position: 2602873-2602892, mismatch: 2, identity: 0.9

caatgaacgaacaatgaacg	CRISPR spacer
caaagaacgaacaaagaacg	Protospacer
*** ********** *****

552. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 261-280, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaagaacgaacaaaagacg	Protospacer
****..**************

553. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 360-379, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacgaatgacg	Protospacer
************.** ****

554. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 382-401, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacgaatgacg	Protospacer
************.** ****

555. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 36524-36543, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaagaacg	Protospacer
***************..***

556. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 111481-111500, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaataacg	Protospacer
*************** .***

557. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 213988-214007, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

558. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 293601-293620, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaaggaaagacg	Protospacer
*********** .*******

559. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343461-343480, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

560. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343472-343491, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

561. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343483-343502, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

562. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343494-343513, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

563. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 343505-343524, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

564. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 355018-355037, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaagaacgaacaaaagacg	Protospacer
****..**************

565. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 1620315-1620334, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaagaacg	Protospacer
***************..***

566. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 1746171-1746190, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgatgaacaaaagacg	Protospacer
**** **.************

567. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 1946499-1946518, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaagaacg	Protospacer
***************..***

568. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2080049-2080068, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

569. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2080060-2080079, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

570. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2080071-2080090, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

571. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2181334-2181353, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

572. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2181356-2181375, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaagaacgaacaaaagacg	Protospacer
****..**************

573. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2181378-2181397, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaagaacg	Protospacer
***************..***

574. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2192455-2192474, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaagaacg	Protospacer
***************..***

575. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2192466-2192485, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaagaacgaacaaaagacg	Protospacer
****..**************

576. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346077-2346096, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

577. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346088-2346107, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

578. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346099-2346118, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

579. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346110-2346129, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

580. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346121-2346140, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

581. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346132-2346151, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

582. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346143-2346162, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

583. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346154-2346173, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

584. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346165-2346184, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

585. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346176-2346195, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

586. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346187-2346206, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

587. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346198-2346217, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

588. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346209-2346228, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

589. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2346220-2346239, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

590. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2422992-2423011, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaagaacgaacaaaagacg	Protospacer
****..**************

591. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2428365-2428384, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaagaaaggacg	Protospacer
*********** ***.****

592. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2428387-2428406, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaagaacg	Protospacer
***************..***

593. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2455561-2455580, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

594. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2455572-2455591, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

595. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2455583-2455602, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

596. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2455594-2455613, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

597. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2455605-2455624, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

598. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2455616-2455635, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

599. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2455627-2455646, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

600. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2462748-2462767, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

601. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2462759-2462778, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

602. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2462770-2462789, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

603. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2462781-2462800, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

604. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2462792-2462811, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

605. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2462803-2462822, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

606. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2462814-2462833, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

607. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2462847-2462866, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

608. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2479778-2479797, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaaggaaagacg	Protospacer
*********** .*******

609. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2486422-2486441, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaaggaaagacg	Protospacer
*********** .*******

610. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2527691-2527710, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

611. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2527790-2527809, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

612. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2527889-2527908, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

613. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2542513-2542532, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaagaacg	Protospacer
***************..***

614. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2550324-2550343, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

615. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2561261-2561280, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

616. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2561272-2561291, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

617. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2561283-2561302, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

618. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2561294-2561313, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

619. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2570015-2570034, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

620. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2570026-2570045, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaatgacgaacaaatgacg	Protospacer
**** ********** ****

621. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2594077-2594096, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacgaatgacg	Protospacer
************.** ****

622. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2602840-2602859, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaagaacgaacaaaagacg	Protospacer
****..**************

623. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to position: 2602884-2602903, mismatch: 2, identity: 0.9

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaagaacg	Protospacer
***************..***

624. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 22537-22556, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacaggcggata	Protospacer
***********.***.****

625. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 82859-82878, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgagccacacaggcagata	Protospacer
*******.***.********

626. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 160084-160103, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcgcaggcagata	Protospacer
*********.*.********

627. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 160128-160147, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcgcaggcagata	Protospacer
*********.*.********

628. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 776435-776454, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgagccgcacggacagtta	Protospacer
*************.*** **

629. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 776490-776509, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgagtcgcacgggcagtta	Protospacer
*****.*********** **

630. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 1493106-1493125, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgagccacgcgggcagata	Protospacer
*******.*.**********

631. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 1891141-1891160, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgagtcgcacggggagata	Protospacer
*****.******** *****

632. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2346242-2346261, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgaaccgcacgggaagata	Protospacer
****.********* *****

633. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2407849-2407868, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgatccgcacaggcagata	Protospacer
**** ******.********

634. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2542293-2542312, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgactcgcacgggcagata	Protospacer
**** .**************

635. spacer 13.3|2108607|20|NC_013162|CRISPRCasFinder matches to position: 2593868-2593887, mismatch: 2, identity: 0.9

gcgagccgcacgggcagata	CRISPR spacer
gcgaactgcacgggcagata	Protospacer
****.*.*************

636. spacer 13.4|2108651|20|NC_013162|CRISPRCasFinder matches to position: 272447-272466, mismatch: 2, identity: 0.9

gaaaggacgaagaaaggacg	CRISPR spacer
gaaagaacgaagaaagaacg	Protospacer
*****.**********.***

637. spacer 13.4|2108651|20|NC_013162|CRISPRCasFinder matches to position: 272458-272477, mismatch: 2, identity: 0.9

gaaaggacgaagaaaggacg	CRISPR spacer
gaatggacgaagaaagaacg	Protospacer
*** ************.***

638. spacer 13.4|2108651|20|NC_013162|CRISPRCasFinder matches to position: 2407729-2407748, mismatch: 2, identity: 0.9

gaaaggacgaagaaaggacg	CRISPR spacer
gaaaagacgaagaaaagacg	Protospacer
****.**********.****

639. spacer 13.4|2108651|20|NC_013162|CRISPRCasFinder matches to position: 2407740-2407759, mismatch: 2, identity: 0.9

gaaaggacgaagaaaggacg	CRISPR spacer
gaaaagacgaagaaaagacg	Protospacer
****.**********.****

640. spacer 13.4|2108651|20|NC_013162|CRISPRCasFinder matches to position: 2428376-2428395, mismatch: 2, identity: 0.9

gaaaggacgaagaaaggacg	CRISPR spacer
gaaaggacgaacaaaagacg	Protospacer
*********** ***.****

641. spacer 13.4|2108651|20|NC_013162|CRISPRCasFinder matches to position: 2527669-2527688, mismatch: 2, identity: 0.9

gaaaggacgaagaaaggacg	CRISPR spacer
gaaaagacgaagaaaagacg	Protospacer
****.**********.****

642. spacer 13.4|2108651|20|NC_013162|CRISPRCasFinder matches to position: 2527768-2527787, mismatch: 2, identity: 0.9

gaaaggacgaagaaaggacg	CRISPR spacer
gaaaagacgaagaaaagacg	Protospacer
****.**********.****

643. spacer 13.4|2108651|20|NC_013162|CRISPRCasFinder matches to position: 2527867-2527886, mismatch: 2, identity: 0.9

gaaaggacgaagaaaggacg	CRISPR spacer
gaaaagacgaagaaaagacg	Protospacer
****.**********.****

644. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 52081-52112, mismatch: 2, identity: 0.938

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgttcatttgcccgtgcggctcgcaccgtctt	Protospacer
****.**.************************

645. spacer 15.2|2511682|32|NC_013162|CRISPRCasFinder matches to position: 160080-160111, mismatch: 2, identity: 0.938

tgtttatctgcccgtgcggctcgcaccgtctt	CRISPR spacer
tgtttatctgcctgcgcggctcgcaccgtctt	Protospacer
************.*.*****************

646. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 36484-36510, mismatch: 2, identity: 0.926

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaagaacggtgcgagccgcacgggca	Protospacer
****..*********************

647. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 160088-160114, mismatch: 2, identity: 0.926

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccgcgcaggca	Protospacer
********************.*.****

648. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2398578-2398604, mismatch: 2, identity: 0.926

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccacacgggca	Protospacer
**** *************.********

649. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2407612-2407638, mismatch: 2, identity: 0.926

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagcagcacgggca	Protospacer
**** ************ *********

650. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2455682-2455708, mismatch: 2, identity: 0.926

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccacacgggca	Protospacer
**** *************.********

651. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2455726-2455752, mismatch: 2, identity: 0.926

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtgcgagccacacgggca	Protospacer
**** *************.********

652. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2542297-2542323, mismatch: 2, identity: 0.926

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgactcgcacgggca	Protospacer
*************** .**********

653. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2556402-2556428, mismatch: 2, identity: 0.926

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaaagacggtgcgagccacacaggca	Protospacer
******************.***.****

654. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to position: 2561243-2561269, mismatch: 2, identity: 0.926

caaaagacggtgcgagccgcacgggca	CRISPR spacer
caaatgacggtacgagccgcacgggca	Protospacer
**** ******.***************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_013162_12	12.2|1981560|22|NC_013162|CRISPRCasFinder	1981560-1981581	22	HQ728263	Erwinia phage vB_EamM-M7, complete genome	9361-9382	2	0.909
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MN693558	Marine virus AFVG_25M213, complete genome	44350-44381	5	0.844
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MN693255	Marine virus AFVG_25M362, complete genome	9009-9040	5	0.844
NC_013162_16	16.2|2550225|27|NC_013162|CRISPRCasFinder	2550225-2550251	27	NC_005893	Lactobacillus phage phiAT3, complete genome	38581-38607	5	0.815
NC_013162_16	16.2|2550225|27|NC_013162|CRISPRCasFinder	2550225-2550251	27	AY605066	Bacteriophage phi AT3, complete sequence	38581-38607	5	0.815
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	HG796331	Uncultured bacterium plasmid pRGI00483	3761-3790	6	0.8
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MN693255	Marine virus AFVG_25M362, complete genome	9009-9038	6	0.8
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MN693558	Marine virus AFVG_25M213, complete genome	44352-44381	6	0.8
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_015173	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK2, complete sequence	17738-17767	6	0.8
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	124353-124382	6	0.8
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MN693375	Marine virus AFVG_25M113, complete genome	15017-15046	6	0.8
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP025613	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence	943221-943250	6	0.8
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	257801-257830	6	0.8
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP047434	Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6	130666-130697	6	0.812
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	257799-257830	6	0.812
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	124353-124384	6	0.812
NC_013162_4	4.1|864559|30|NC_013162|CRISPRCasFinder	864559-864588	30	NZ_CP012899	Burkholderia sp. CCGE1001 plasmid pCCGE1001a, complete sequence	225308-225337	6	0.8
NC_013162_16	16.2|2550225|27|NC_013162|CRISPRCasFinder	2550225-2550251	27	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	24969-24995	6	0.778
NC_013162_16	16.2|2550225|27|NC_013162|CRISPRCasFinder	2550225-2550251	27	NZ_CP009710	Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_2, complete sequence	24257-24283	6	0.778
NC_013162_16	16.2|2550225|27|NC_013162|CRISPRCasFinder	2550225-2550251	27	NC_006154	Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953, complete sequence	17313-17339	6	0.778
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP047434	Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6	130668-130697	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP007453	Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence	784729-784758	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP004879	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB7635, complete sequence	4250-4279	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_AP014872	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK8, complete sequence	5038-5067	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_020243	Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT7, complete sequence	7519-7548	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP004881	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB8513, complete sequence	4146-4175	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP037748	Campylobacter helveticus strain 2013D-9613 plasmid unnamed2, complete sequence	2064-2093	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_001272	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB9741, complete sequence	4297-4326	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_017207	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT8513, complete sequence	5091-5120	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP011354	Bacillus thuringiensis strain YC-10 plasmid pYC6, complete sequence	1385-1414	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP015181	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB8208, complete sequence	1010-1039	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_018882	Bacillus thuringiensis Bt407 plasmid BTB_7p, complete sequence	2124-2153	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_018886	Bacillus thuringiensis Bt407 plasmid BTB_9p, complete sequence	2192-2221	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP015153	Bacillus thuringiensis strain Bc601 plasmid pBTBC3, complete sequence	14463-14492	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP015153	Bacillus thuringiensis strain Bc601 plasmid pBTBC3, complete sequence	22976-23005	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP015153	Bacillus thuringiensis strain Bc601 plasmid pBTBC3, complete sequence	31475-31504	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP015153	Bacillus thuringiensis strain Bc601 plasmid pBTBC3, complete sequence	39862-39891	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP013061	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-6, complete sequence	7828-7857	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP004864	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB8513, complete sequence	5797-5826	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP004867	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB7635, complete sequence	961-990	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_020241	Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT8_1, complete sequence	305-334	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	314152-314181	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MK448529	Streptococcus satellite phage Javan542, complete genome	7390-7419	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MK448531	Streptococcus satellite phage Javan544, complete genome	7390-7419	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	LT960552	Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite	282088-282117	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	LR596615	Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I	283851-283880	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_042116	Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite	283851-283880	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MK448533	Streptococcus satellite phage Javan546, complete genome	7362-7391	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	KT264794	Gokushovirus WZ-2015a isolate 46Fx8, complete genome	3825-3854	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MK448530	Streptococcus satellite phage Javan543, complete genome	7363-7392	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	AP013642	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C42-MedDCM-OCT-S37-C124, *** SEQUENCING IN PROGRESS ***	10080-10109	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP013332	Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence	44987-45016	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP028874	Borreliella bavariensis PBi plasmid lp25_cp32-3, complete sequence	43990-44019	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	7043-7072	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP015757	Clostridium estertheticum subsp. estertheticum strain DSM 8809 plasmid pDSM8809, complete sequence	23767-23796	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MK721191	Enterococcus phage vB_EfaS_Ef5.4, complete genome	29286-29315	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MN693132	Marine virus AFVG_25M489, complete genome	34805-34834	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	AP013358	Uncultured Mediterranean phage uvMED DNA, complete genome, group G1, isolate: uvMED-CGR-U-MedDCM-OCT-S27-C45	2821-2850	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MK721186	Enterococcus phage vB_EfaS_Ef5.2, complete genome	29552-29581	7	0.767
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	KJ127304	Enterococcus phage AUEF3, partial genome	20402-20431	7	0.767
NC_013162_3	3.5|709594|30|NC_013162|PILER-CR	709594-709623	30	NZ_CP026682	Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence	179411-179440	7	0.767
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	HG796331	Uncultured bacterium plasmid pRGI00483	3761-3792	7	0.781
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	322666-322697	7	0.781
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP021062	Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence	538146-538177	7	0.781
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MT411892	Staphylococcus phage Metroid, complete genome	4873-4904	7	0.781
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MT411892	Staphylococcus phage Metroid, complete genome	145671-145702	7	0.781
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	AP018375	Staphylococcus phage phiSA039 DNA, complete genome	138093-138124	7	0.781
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1330478-1330504	7	0.741
NC_013162_16	16.1|2550159|27|NC_013162|CRISPRCasFinder	2550159-2550185	27	MN694318	Marine virus AFVG_250M1065, complete genome	24417-24443	7	0.741
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MN850604	Escherichia phage tunzivis, complete genome	19446-19475	8	0.733
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	LR596614	Escherichia phage vB_Eco_SLUR29 genome assembly, chromosome: 1	317-346	8	0.733
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	NC_048206	Escherichia virus vB_Eco_mar001J1 genome assembly, chromosome: 1	13141-13170	8	0.733
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	LR027385	Escherichia virus vB_Eco_mar001J1 strain vB_Eco_mar002J2 genome assembly, chromosome: 1	34382-34411	8	0.733
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MN850634	Escherichia phage tinuso, complete genome	15922-15951	8	0.733
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	NC_047938	Escherichia phage SECphi27 genome assembly, complete genome: monopartite	22069-22098	8	0.733
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	NC_049819	Escherichia phage atuna, complete genome	32301-32330	8	0.733
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MK719750	Rheinheimera phage vB_RspM_Barba31A, complete genome	54220-54249	8	0.733
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	NC_048190	Rheinheimera phage vB_RspM_Barba19A, complete genome	54211-54240	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP031089	Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence	3275-3304	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP031089	Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence	25773-25802	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP031089	Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence	43691-43720	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP018877	Bacillus megaterium strain JX285 plasmid 4, complete sequence	66410-66439	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	322666-322695	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	397803-397832	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	77796-77825	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP021062	Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence	538146-538175	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MN693725	Marine virus AFVG_250M494, complete genome	2391-2420	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	AP013430	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C55	16905-16934	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	293815-293844	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP023318	Bacillus megaterium strain A plasmid p1, complete sequence	124393-124422	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MT411892	Staphylococcus phage Metroid, complete genome	4875-4904	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MT411892	Staphylococcus phage Metroid, complete genome	145673-145702	8	0.733
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	AP018375	Staphylococcus phage phiSA039 DNA, complete genome	138095-138124	8	0.733
NC_013162_3	3.4|709518|30|NC_013162|PILER-CR	709518-709547	30	NZ_CP025992	Lactobacillus plantarum subsp. plantarum strain LB1-2 plasmid pLB1-2A, complete sequence	49317-49346	8	0.733
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MK719750	Rheinheimera phage vB_RspM_Barba31A, complete genome	54220-54251	8	0.75
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	NC_048190	Rheinheimera phage vB_RspM_Barba19A, complete genome	54211-54242	8	0.75
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP028874	Borreliella bavariensis PBi plasmid lp25_cp32-3, complete sequence	43988-44019	8	0.75
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	77796-77827	8	0.75
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MK721191	Enterococcus phage vB_EfaS_Ef5.4, complete genome	29284-29315	8	0.75
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	AP013430	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C55	16905-16936	8	0.75
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MK721186	Enterococcus phage vB_EfaS_Ef5.2, complete genome	29550-29581	8	0.75
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	KJ127304	Enterococcus phage AUEF3, partial genome	20400-20431	8	0.75
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MN850643	Escherichia phage tiwna, complete genome	7383-7412	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MN850582	Escherichia phage ityhuna, complete genome	10287-10316	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MF564201	Escherichia phage vB_EcoS-95, complete genome	26700-26729	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	NC_049817	Escherichia phage tonnikala, complete genome	25943-25972	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	LT841304	Escherichia phage vB_Eco_swan01 genome assembly, chromosome: I	26561-26590	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MN850586	Escherichia phage orkinos, complete genome	3025-3054	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MN781674	Escherichia phage vB_EcoS_XY3, complete genome	10706-10735	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MK962751	Shigella phage JK16, complete genome	26309-26338	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MN850638	Escherichia phage tunus, complete genome	21435-21464	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	NC_049815	Escherichia phage tonn, complete genome	3108-3137	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MN850606	Escherichia phage tuinn, complete genome	38744-38773	9	0.7
NC_013162_3	3.1|709290|30|NC_013162|PILER-CR	709290-709319	30	MN850641	Escherichia phage tonijn, complete genome	47248-47277	9	0.7
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MK250016	Prevotella phage Lak-A1, complete genome	237910-237939	9	0.7
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NZ_CP031089	Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence	17807-17836	9	0.7
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MH356730	Staphylococcus phage VB-SauS-SA2, complete genome	38589-38618	9	0.7
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MK554696	Fusobacterium phage Fnu1, complete genome	7460-7489	9	0.7
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP007453	Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence	784727-784758	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	293813-293844	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP013332	Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence	44985-45016	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	314152-314183	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP015757	Clostridium estertheticum subsp. estertheticum strain DSM 8809 plasmid pDSM8809, complete sequence	23765-23796	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MK448529	Streptococcus satellite phage Javan542, complete genome	7390-7421	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MN693132	Marine virus AFVG_25M489, complete genome	34803-34834	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MK448531	Streptococcus satellite phage Javan544, complete genome	7390-7421	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MK448533	Streptococcus satellite phage Javan546, complete genome	7362-7393	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	KT264794	Gokushovirus WZ-2015a isolate 46Fx8, complete genome	3825-3856	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MK448530	Streptococcus satellite phage Javan543, complete genome	7363-7394	9	0.719
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	AP013642	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C42-MedDCM-OCT-S37-C124, *** SEQUENCING IN PROGRESS ***	10080-10111	9	0.719
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MH809530	Lactobacillus phage Dionysus, complete genome	44845-44874	10	0.667
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MG765277	Lactobacillus phage Bacchae, complete genome	43866-43895	10	0.667
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_048084	Lactobacillus phage Iacchus, complete genome	46164-46193	10	0.667
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MH809531	Lactobacillus phage Bromius, complete genome	49229-49258	10	0.667
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	NC_047926	Lactobacillus phage Semele, complete genome	46582-46611	10	0.667
NC_013162_3	3.2|709366|30|NC_013162|PILER-CR	709366-709395	30	MG557979	Lactobacillus phage Lpa804, complete genome	17244-17273	10	0.667
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MN850604	Escherichia phage tunzivis, complete genome	19444-19475	10	0.688
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	LR596614	Escherichia phage vB_Eco_SLUR29 genome assembly, chromosome: 1	317-348	10	0.688
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	NC_048206	Escherichia virus vB_Eco_mar001J1 genome assembly, chromosome: 1	13141-13172	10	0.688
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	LR027385	Escherichia virus vB_Eco_mar001J1 strain vB_Eco_mar002J2 genome assembly, chromosome: 1	34382-34413	10	0.688
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MN850634	Escherichia phage tinuso, complete genome	15920-15951	10	0.688
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	NC_047938	Escherichia phage SECphi27 genome assembly, complete genome: monopartite	22067-22098	10	0.688
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	NC_049819	Escherichia phage atuna, complete genome	32301-32332	10	0.688
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	NZ_CP023318	Bacillus megaterium strain A plasmid p1, complete sequence	124391-124422	10	0.688
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	397801-397832	10	0.688
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MN693725	Marine virus AFVG_250M494, complete genome	2391-2422	10	0.688
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MN850643	Escherichia phage tiwna, complete genome	7381-7412	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MN850582	Escherichia phage ityhuna, complete genome	10285-10316	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MF564201	Escherichia phage vB_EcoS-95, complete genome	26698-26729	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	NC_049817	Escherichia phage tonnikala, complete genome	25941-25972	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	LT841304	Escherichia phage vB_Eco_swan01 genome assembly, chromosome: I	26561-26592	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MN850586	Escherichia phage orkinos, complete genome	3023-3054	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MN781674	Escherichia phage vB_EcoS_XY3, complete genome	10704-10735	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MK962751	Shigella phage JK16, complete genome	26307-26338	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MN850638	Escherichia phage tunus, complete genome	21435-21466	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	NC_049815	Escherichia phage tonn, complete genome	3108-3139	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MN850606	Escherichia phage tuinn, complete genome	38742-38773	11	0.656
NC_013162_3	3.6|709288|32|NC_013162|CRISPRCasFinder	709288-709319	32	MN850641	Escherichia phage tonijn, complete genome	47246-47277	11	0.656
NC_013162_3	3.7|709364|32|NC_013162|CRISPRCasFinder	709364-709395	32	MK554696	Fusobacterium phage Fnu1, complete genome	7458-7489	11	0.656

1. spacer 12.2|1981560|22|NC_013162|CRISPRCasFinder matches to HQ728263 (Erwinia phage vB_EamM-M7, complete genome) position: , mismatch: 2, identity: 0.909

gagcaaagaaagaacgaacaat	CRISPR spacer
gagcaaagaatgaacgaacaac	Protospacer
********** **********.

2. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MN693558 (Marine virus AFVG_25M213, complete genome) position: , mismatch: 5, identity: 0.844

-acgttttccatttttctttaattttatttata	CRISPR spacer
tacatttt-aatttttctttaattttatttttt	Protospacer
 **.****  ******************** * 

3. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MN693255 (Marine virus AFVG_25M362, complete genome) position: , mismatch: 5, identity: 0.844

-acgttttccatttttctttaattttatttata	CRISPR spacer
tacatttt-aatttttctttaattttatttttt	Protospacer
 **.****  ******************** * 

4. spacer 16.2|2550225|27|NC_013162|CRISPRCasFinder matches to NC_005893 (Lactobacillus phage phiAT3, complete genome) position: , mismatch: 5, identity: 0.815

caaagaacgaagaaaagacgaacaaag	CRISPR spacer
acaaggacgaagacaagacgaacaacg	Protospacer
  ***.******* *********** *

5. spacer 16.2|2550225|27|NC_013162|CRISPRCasFinder matches to AY605066 (Bacteriophage phi AT3, complete sequence) position: , mismatch: 5, identity: 0.815

caaagaacgaagaaaagacgaacaaag	CRISPR spacer
acaaggacgaagacaagacgaacaacg	Protospacer
  ***.******* *********** *

6. spacer 3.2|709366|30|NC_013162|PILER-CR matches to HG796331 (Uncultured bacterium plasmid pRGI00483) position: , mismatch: 6, identity: 0.8

gttttccatttttctttaattttatttata	CRISPR spacer
gttttccattttactttaattttacgctca	Protospacer
************ ***********. . .*

7. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MN693255 (Marine virus AFVG_25M362, complete genome) position: , mismatch: 6, identity: 0.8

gttttccatttttctttaattttatttata	CRISPR spacer
cattttaatttttctttaattttatttttt	Protospacer
  ***. ******************** * 

8. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MN693558 (Marine virus AFVG_25M213, complete genome) position: , mismatch: 6, identity: 0.8

gttttccatttttctttaattttatttata	CRISPR spacer
cattttaatttttctttaattttatttttt	Protospacer
  ***. ******************** * 

9. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_015173 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK2, complete sequence) position: , mismatch: 6, identity: 0.8

gttttccatttttctttaattttatttata	CRISPR spacer
gtttcagtgttttccttaattttatttata	Protospacer
****.    *****.***************

10. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 6, identity: 0.8

gttttccatttttctttaattttatttata	CRISPR spacer
ttttctaatttttctataattttttttata	Protospacer
 ***.. ******** ******* ******

11. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MN693375 (Marine virus AFVG_25M113, complete genome) position: , mismatch: 6, identity: 0.8

gttttccatttttctttaattttatttata	CRISPR spacer
gttaatgattgttctttaattttatttaaa	Protospacer
***  . *** ***************** *

12. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gttttccat-ttttctttaattttatttata	CRISPR spacer
-ttagctgtgttttctttaattttattttta	Protospacer
 **  *..* ****************** **

13. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 6, identity: 0.8

gttttccatttttctttaattttatttata	CRISPR spacer
ttttctaatttttctataattttttttata	Protospacer
 ***.. ******** ******* ******

14. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 6, identity: 0.812

acgttttc---catttttctttaattttatttata	CRISPR spacer
---ttttcataaatttctcttttattttatttata	Protospacer
   *****    ****.***** ************

15. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 6, identity: 0.812

acgttttcc-atttttctttaattttatttata	CRISPR spacer
-tattttctaatttttctataattttttttata	Protospacer
 ..*****. ******** ******* ******

16. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 6, identity: 0.812

acgttttcc-atttttctttaattttatttata	CRISPR spacer
-tattttctaatttttctataattttttttata	Protospacer
 ..*****. ******** ******* ******

17. spacer 4.1|864559|30|NC_013162|CRISPRCasFinder matches to NZ_CP012899 (Burkholderia sp. CCGE1001 plasmid pCCGE1001a, complete sequence) position: , mismatch: 6, identity: 0.8

gcccacgaattgcacgaatttgcacgaata-	CRISPR spacer
gcccacgaattgcacgacttt-tatgagttt	Protospacer
***************** *** .*.**.*  

18. spacer 16.2|2550225|27|NC_013162|CRISPRCasFinder matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

caaagaacgaagaaaagacgaacaaag	CRISPR spacer
tgaggaacgaagaaaagacgaacggcg	Protospacer
..*.*******************.. *

19. spacer 16.2|2550225|27|NC_013162|CRISPRCasFinder matches to NZ_CP009710 (Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_2, complete sequence) position: , mismatch: 6, identity: 0.778

caaagaacgaagaaaagacgaacaaag	CRISPR spacer
tgaggaacgaagaaaagacgaacggcg	Protospacer
..*.*******************.. *

20. spacer 16.2|2550225|27|NC_013162|CRISPRCasFinder matches to NC_006154 (Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953, complete sequence) position: , mismatch: 6, identity: 0.778

caaagaacgaagaaaagacgaacaaag	CRISPR spacer
tgaggaacgaagaaaagacgaacggcg	Protospacer
..*.*******************.. *

21. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
ttcataaatttctcttttattttatttata	Protospacer
 *. *  ****.***** ************

22. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP007453 (Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
attttctatttttatttaattttattagcc	Protospacer
.*****.****** ************ .. 

23. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP004879 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB7635, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

24. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_AP014872 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK8, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
tcagtctttttttcattaattttatttata	Protospacer
 .  **. ****** ***************

25. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_020243 (Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT7, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

26. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP004881 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB8513, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

27. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP037748 (Campylobacter helveticus strain 2013D-9613 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
gaattccatttttcattaattttatagcca	Protospacer
*  *********** **********   .*

28. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_001272 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB9741, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

29. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_017207 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT8513, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

30. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP011354 (Bacillus thuringiensis strain YC-10 plasmid pYC6, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

31. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP015181 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB8208, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

32. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_018882 (Bacillus thuringiensis Bt407 plasmid BTB_7p, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

33. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_018886 (Bacillus thuringiensis Bt407 plasmid BTB_9p, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

34. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP015153 (Bacillus thuringiensis strain Bc601 plasmid pBTBC3, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

35. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP015153 (Bacillus thuringiensis strain Bc601 plasmid pBTBC3, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

36. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP015153 (Bacillus thuringiensis strain Bc601 plasmid pBTBC3, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

37. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP015153 (Bacillus thuringiensis strain Bc601 plasmid pBTBC3, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

38. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP013061 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-6, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

39. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP004864 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB8513, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

40. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP004867 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB7635, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

41. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_020241 (Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT8_1, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atcagtcttttttctttagttttatttata	Protospacer
.*.  .* **********.***********

42. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
ctactaaatttttctctaatttcatttata	Protospacer
 * .*  ********.******.*******

43. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MK448529 (Streptococcus satellite phage Javan542, complete genome) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
gttttccctttttcttcaattttgatagga	Protospacer
******* ********.******. * . *

44. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MK448531 (Streptococcus satellite phage Javan544, complete genome) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
gttttccctttttcttcaattttgatagga	Protospacer
******* ********.******. * . *

45. spacer 3.2|709366|30|NC_013162|PILER-CR matches to LT960552 (Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
gattgtatcttttctttaattttattcata	Protospacer
* ** .  .*****************.***

46. spacer 3.2|709366|30|NC_013162|PILER-CR matches to LR596615 (Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
gattgtatcttttctttaattttattcata	Protospacer
* ** .  .*****************.***

47. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_042116 (Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
gattgtatcttttctttaattttattcata	Protospacer
* ** .  .*****************.***

48. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MK448533 (Streptococcus satellite phage Javan546, complete genome) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
gttttccctttttcttcaattttgatagga	Protospacer
******* ********.******. * . *

49. spacer 3.2|709366|30|NC_013162|PILER-CR matches to KT264794 (Gokushovirus WZ-2015a isolate 46Fx8, complete genome) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
ttatatcatttttctttaatttttttcatt	Protospacer
 * * .***************** **.** 

50. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MK448530 (Streptococcus satellite phage Javan543, complete genome) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
gttttccctttttcttcaattttgatagga	Protospacer
******* ********.******. * . *

51. spacer 3.2|709366|30|NC_013162|PILER-CR matches to AP013642 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C42-MedDCM-OCT-S37-C124, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
actcacaatttgtttttaattttatttata	Protospacer
..*. * **** *.****************

52. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP013332 (Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
ccattccatatttttttaattttattaaaa	Protospacer
 . ****** ***.************ * *

53. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP028874 (Borreliella bavariensis PBi plasmid lp25_cp32-3, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
tggttgtatttttttttatttttatttata	Protospacer
   ** .******.**** ***********

54. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
ttttgattttcttctttaattttatttatt	Protospacer
 ***  . **.****************** 

55. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP015757 (Clostridium estertheticum subsp. estertheticum strain DSM 8809 plasmid pDSM8809, complete sequence) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
atatcatatttttctttaataatatttata	Protospacer
.* *. .*************  ********

56. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MK721191 (Enterococcus phage vB_EfaS_Ef5.4, complete genome) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
cttttccatttttctttagtcttaaaaatt	Protospacer
 *****************.*.***   ** 

57. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MN693132 (Marine virus AFVG_25M489, complete genome) position: , mismatch: 7, identity: 0.767

gttttcc-----atttttctttaattttatttata	CRISPR spacer
-----ccagaagatttttttttaattttatctata	Protospacer
     **     ******.***********.****

58. spacer 3.2|709366|30|NC_013162|PILER-CR matches to AP013358 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G1, isolate: uvMED-CGR-U-MedDCM-OCT-S27-C45) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
taattaaatttttatttaattttatttaca	Protospacer
   **  ****** **************.*

59. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MK721186 (Enterococcus phage vB_EfaS_Ef5.2, complete genome) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
cttttccatttttctttagtcttaaaaatt	Protospacer
 *****************.*.***   ** 

60. spacer 3.2|709366|30|NC_013162|PILER-CR matches to KJ127304 (Enterococcus phage AUEF3, partial genome) position: , mismatch: 7, identity: 0.767

gttttccatttttctttaattttatttata	CRISPR spacer
cttttccatttttctttagtcttaaaaatt	Protospacer
 *****************.*.***   ** 

61. spacer 3.5|709594|30|NC_013162|PILER-CR matches to NZ_CP026682 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence) position: , mismatch: 7, identity: 0.767

taattgatgttggactctctcgttagtaca	CRISPR spacer
atattgattttggactctctcgtacataga	Protospacer
  ****** **************  .** *

62. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to HG796331 (Uncultured bacterium plasmid pRGI00483) position: , mismatch: 7, identity: 0.781

acgttttccatttttctttaattttatttata	CRISPR spacer
atgttttccattttactttaattttacgctca	Protospacer
*.************ ***********. . .*

63. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 7, identity: 0.781

acgtttt---ccatttttctttaattttatttata	CRISPR spacer
---ttttaaaatatttttctttaattatttttata	Protospacer
   ****    .************** * ******

64. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP021062 (Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence) position: , mismatch: 7, identity: 0.781

acgtttt---ccatttttctttaattttatttata	CRISPR spacer
---ttttaaaatatttttctttaattatttttata	Protospacer
   ****    .************** * ******

65. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MT411892 (Staphylococcus phage Metroid, complete genome) position: , mismatch: 7, identity: 0.781

acgttttcc----atttttctttaattttatttata	CRISPR spacer
----tttctagggatttttatttatttttatttata	Protospacer
    ****.    ****** **** ***********

66. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MT411892 (Staphylococcus phage Metroid, complete genome) position: , mismatch: 7, identity: 0.781

acgttttcc----atttttctttaattttatttata	CRISPR spacer
----tttctagggatttttatttatttttatttata	Protospacer
    ****.    ****** **** ***********

67. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to AP018375 (Staphylococcus phage phiSA039 DNA, complete genome) position: , mismatch: 7, identity: 0.781

acgttttcc----atttttctttaattttatttata	CRISPR spacer
----tttctagggatttttatttatttttatttata	Protospacer
    ****.    ****** **** ***********

68. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

caaaagacggtgcgagccgcacgggca	CRISPR spacer
acgccgacggtgcgagcggcacgggcg	Protospacer
  .  ************ ********.

69. spacer 16.1|2550159|27|NC_013162|CRISPRCasFinder matches to MN694318 (Marine virus AFVG_250M1065, complete genome) position: , mismatch: 7, identity: 0.741

caaaagacggtgcgagccgcacgggca	CRISPR spacer
ttcgagacgttgcgagccgcacgggtc	Protospacer
.  .***** ***************. 

70. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MN850604 (Escherichia phage tunzivis, complete genome) position: , mismatch: 8, identity: 0.733

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtattcacattgaggataa	Protospacer
.  .**************.********...

71. spacer 3.1|709290|30|NC_013162|PILER-CR matches to LR596614 (Escherichia phage vB_Eco_SLUR29 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.733

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtattcacattgaggataa	Protospacer
.  .**************.********...

72. spacer 3.1|709290|30|NC_013162|PILER-CR matches to NC_048206 (Escherichia virus vB_Eco_mar001J1 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.733

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccatattgaggataa	Protospacer
.  .***********.***********...

73. spacer 3.1|709290|30|NC_013162|PILER-CR matches to LR027385 (Escherichia virus vB_Eco_mar001J1 strain vB_Eco_mar002J2 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.733

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccatattgaggataa	Protospacer
.  .***********.***********...

74. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MN850634 (Escherichia phage tinuso, complete genome) position: , mismatch: 8, identity: 0.733

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtattcacattgaggataa	Protospacer
.  .**************.********...

75. spacer 3.1|709290|30|NC_013162|PILER-CR matches to NC_047938 (Escherichia phage SECphi27 genome assembly, complete genome: monopartite) position: , mismatch: 8, identity: 0.733

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtattcacattgaggataa	Protospacer
.  .**************.********...

76. spacer 3.1|709290|30|NC_013162|PILER-CR matches to NC_049819 (Escherichia phage atuna, complete genome) position: , mismatch: 8, identity: 0.733

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggacaa	Protospacer
.  .***********.**.*********..

77. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MK719750 (Rheinheimera phage vB_RspM_Barba31A, complete genome) position: , mismatch: 8, identity: 0.733

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
agttttgagaggtattcatattgagcagca	Protospacer
  ***** ** ************** *  .

78. spacer 3.1|709290|30|NC_013162|PILER-CR matches to NC_048190 (Rheinheimera phage vB_RspM_Barba19A, complete genome) position: , mismatch: 8, identity: 0.733

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
agttttgagaggtattcatattgagcagca	Protospacer
  ***** ** ************** *  .

79. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP031089 (Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
ctgggtcatttttcttttattttatttagt	Protospacer
 *   .*********** **********  

80. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP031089 (Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
ctgggtcatttttcttttattttatttagt	Protospacer
 *   .*********** **********  

81. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP031089 (Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
ctgggtcatttttcttttattttatttagt	Protospacer
 *   .*********** **********  

82. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP018877 (Bacillus megaterium strain JX285 plasmid 4, complete sequence) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
tttttccattcttctttaatttttcgttcc	Protospacer
 *********.************ . * . 

83. spacer 3.2|709366|30|NC_013162|PILER-CR matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
ttaaaatatttttctttaattatttttata	Protospacer
 *    .************** * ******

84. spacer 3.2|709366|30|NC_013162|PILER-CR matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
tgcttctatttttctttaatttcattagga	Protospacer
  .***.***************.*** . *

85. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
tgtttccatatttatttaattttatattgg	Protospacer
  ******* *** *********** *  .

86. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP021062 (Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
ttaaaatatttttctttaattatttttata	Protospacer
 *    .************** * ******

87. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MN693725 (Marine virus AFVG_250M494, complete genome) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
gtttttcatttttctttactttttaaggtt	Protospacer
*****.************ ****    .* 

88. spacer 3.2|709366|30|NC_013162|PILER-CR matches to AP013430 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C55) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
ttaaaatatttttcagtaattttatttata	Protospacer
 *    .*******  **************

89. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
tgaatatatttttctgtatttttatttata	Protospacer
    * .******** ** ***********

90. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP023318 (Bacillus megaterium strain A plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
actaggcattgttttttaattttatttatg	Protospacer
..*   **** **.***************.

91. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MT411892 (Staphylococcus phage Metroid, complete genome) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
tctagggatttttatttatttttatttata	Protospacer
 .*    ****** **** ***********

92. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MT411892 (Staphylococcus phage Metroid, complete genome) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
tctagggatttttatttatttttatttata	Protospacer
 .*    ****** **** ***********

93. spacer 3.2|709366|30|NC_013162|PILER-CR matches to AP018375 (Staphylococcus phage phiSA039 DNA, complete genome) position: , mismatch: 8, identity: 0.733

gttttccatttttctttaattttatttata	CRISPR spacer
tctagggatttttatttatttttatttata	Protospacer
 .*    ****** **** ***********

94. spacer 3.4|709518|30|NC_013162|PILER-CR matches to NZ_CP025992 (Lactobacillus plantarum subsp. plantarum strain LB1-2 plasmid pLB1-2A, complete sequence) position: , mismatch: 8, identity: 0.733

ggactctcaagacttcctacgctcagcttt	CRISPR spacer
ccactctcaaaacttcctacgctacaattc	Protospacer
  ********.************  . **.

95. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MK719750 (Rheinheimera phage vB_RspM_Barba31A, complete genome) position: , mismatch: 8, identity: 0.75

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
acagttttgagaggtattcatattgagcagca	Protospacer
**  ***** ** ************** *  .

96. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to NC_048190 (Rheinheimera phage vB_RspM_Barba19A, complete genome) position: , mismatch: 8, identity: 0.75

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
acagttttgagaggtattcatattgagcagca	Protospacer
**  ***** ** ************** *  .

97. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP028874 (Borreliella bavariensis PBi plasmid lp25_cp32-3, complete sequence) position: , mismatch: 8, identity: 0.75

acgttttccatttttctttaattttatttata	CRISPR spacer
attggttgtatttttttttatttttatttata	Protospacer
*.   ** .******.**** ***********

98. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 8, identity: 0.75

acgt-tttccatttttctttaattttatttata	CRISPR spacer
-catgtttccatatttatttaattttatattgg	Protospacer
 *.* ******* *** *********** *  .

99. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MK721191 (Enterococcus phage vB_EfaS_Ef5.4, complete genome) position: , mismatch: 8, identity: 0.75

acgttttccatttttctttaattttatttata	CRISPR spacer
atcttttccatttttctttagtcttaaaaatt	Protospacer
*. *****************.*.***   ** 

100. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to AP013430 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C55) position: , mismatch: 8, identity: 0.75

acgtttt---ccatttttctttaattttatttata	CRISPR spacer
---ctttaaaatatttttcagtaattttatttata	Protospacer
   .***    .*******  **************

101. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MK721186 (Enterococcus phage vB_EfaS_Ef5.2, complete genome) position: , mismatch: 8, identity: 0.75

acgttttccatttttctttaattttatttata	CRISPR spacer
atcttttccatttttctttagtcttaaaaatt	Protospacer
*. *****************.*.***   ** 

102. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to KJ127304 (Enterococcus phage AUEF3, partial genome) position: , mismatch: 8, identity: 0.75

acgttttccatttttctttaattttatttata	CRISPR spacer
atcttttccatttttctttagtcttaaaaatt	Protospacer
*. *****************.*.***   ** 

103. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MN850643 (Escherichia phage tiwna, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

104. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MN850582 (Escherichia phage ityhuna, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

105. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MF564201 (Escherichia phage vB_EcoS-95, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

106. spacer 3.1|709290|30|NC_013162|PILER-CR matches to NC_049817 (Escherichia phage tonnikala, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

107. spacer 3.1|709290|30|NC_013162|PILER-CR matches to LT841304 (Escherichia phage vB_Eco_swan01 genome assembly, chromosome: I) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

108. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MN850586 (Escherichia phage orkinos, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

109. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MN781674 (Escherichia phage vB_EcoS_XY3, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

110. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MK962751 (Shigella phage JK16, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

111. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MN850638 (Escherichia phage tunus, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

112. spacer 3.1|709290|30|NC_013162|PILER-CR matches to NC_049815 (Escherichia phage tonn, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

113. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MN850606 (Escherichia phage tuinn, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

114. spacer 3.1|709290|30|NC_013162|PILER-CR matches to MN850641 (Escherichia phage tonijn, complete genome) position: , mismatch: 9, identity: 0.7

tcttttgcgacgtattcatattgaggacgg	CRISPR spacer
cagcttgcgacgtatccacattgaggataa	Protospacer
.  .***********.**.********...

115. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.7

gttttccatttttctttaattttatttata	CRISPR spacer
tctaataatttttttttaattttatttaat	Protospacer
 .*  . ******.**************  

116. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NZ_CP031089 (Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence) position: , mismatch: 9, identity: 0.7

gttttccatttttctttaattttatttata	CRISPR spacer
tccggtcatttttcttttattttatttagt	Protospacer
 ..  .*********** **********  

117. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MH356730 (Staphylococcus phage VB-SauS-SA2, complete genome) position: , mismatch: 9, identity: 0.7

gttttccatttttctttaattttatttata	CRISPR spacer
aagtaattattttctttaagtttatttata	Protospacer
.  *  .  ********** **********

118. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MK554696 (Fusobacterium phage Fnu1, complete genome) position: , mismatch: 9, identity: 0.7

gttttccatttttctttaattttatttata	CRISPR spacer
acaccgaatttatttttaattttatttata	Protospacer
.. ..  **** *.****************

119. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP007453 (Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
gtattttctatttttatttaattttattagcc	Protospacer
...*****.****** ************ .. 

120. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
attgaatatatttttctgtatttttatttata	Protospacer
*.    * .******** ** ***********

121. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP013332 (Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
ctccattccatatttttttaattttattaaaa	Protospacer
 . . ****** ***.************ * *

122. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
tactactaaatttttctctaatttcatttata	Protospacer
   * .*  ********.******.*******

123. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP015757 (Clostridium estertheticum subsp. estertheticum strain DSM 8809 plasmid pDSM8809, complete sequence) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
caatatcatatttttctttaataatatttata	Protospacer
  .* *. .*************  ********

124. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MK448529 (Streptococcus satellite phage Javan542, complete genome) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
gtgttttccctttttcttcaattttgatagga	Protospacer
..******* ********.******. * . *

125. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MN693132 (Marine virus AFVG_25M489, complete genome) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
acccagaagatttttttttaattttatctata	Protospacer
** .     ******.***********.****

126. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MK448531 (Streptococcus satellite phage Javan544, complete genome) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
gtgttttccctttttcttcaattttgatagga	Protospacer
..******* ********.******. * . *

127. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MK448533 (Streptococcus satellite phage Javan546, complete genome) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
gtgttttccctttttcttcaattttgatagga	Protospacer
..******* ********.******. * . *

128. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to KT264794 (Gokushovirus WZ-2015a isolate 46Fx8, complete genome) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
tattatatcatttttctttaatttttttcatt	Protospacer
   * * .***************** **.** 

129. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MK448530 (Streptococcus satellite phage Javan543, complete genome) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
gtgttttccctttttcttcaattttgatagga	Protospacer
..******* ********.******. * . *

130. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to AP013642 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C42-MedDCM-OCT-S37-C124, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

acgttttccatttttctttaattttatttata	CRISPR spacer
taactcacaatttgtttttaattttatttata	Protospacer
  ..*. * **** *.****************

131. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MH809530 (Lactobacillus phage Dionysus, complete genome) position: , mismatch: 10, identity: 0.667

gttttccatttttctttaattttatttata	CRISPR spacer
aacgcacatttttatttaattttattttcc	Protospacer
. . . ******* ************* . 

132. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MG765277 (Lactobacillus phage Bacchae, complete genome) position: , mismatch: 10, identity: 0.667

gttttccatttttctttaattttatttata	CRISPR spacer
aacgcacatttttatttaattttattttcc	Protospacer
. . . ******* ************* . 

133. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_048084 (Lactobacillus phage Iacchus, complete genome) position: , mismatch: 10, identity: 0.667

gttttccatttttctttaattttatttata	CRISPR spacer
aacgcacatttttatttaattttattttcc	Protospacer
. . . ******* ************* . 

134. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MH809531 (Lactobacillus phage Bromius, complete genome) position: , mismatch: 10, identity: 0.667

gttttccatttttctttaattttatttata	CRISPR spacer
aacgcacatttttatttaattttattttcc	Protospacer
. . . ******* ************* . 

135. spacer 3.2|709366|30|NC_013162|PILER-CR matches to NC_047926 (Lactobacillus phage Semele, complete genome) position: , mismatch: 10, identity: 0.667

gttttccatttttctttaattttatttata	CRISPR spacer
aacgcacatttttatttaattttattttcc	Protospacer
. . . ******* ************* . 

136. spacer 3.2|709366|30|NC_013162|PILER-CR matches to MG557979 (Lactobacillus phage Lpa804, complete genome) position: , mismatch: 10, identity: 0.667

gttttccatttttctttaattttatttata	CRISPR spacer
aacgcacatttttatttaattttattttcc	Protospacer
. . . ******* ************* . 

137. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MN850604 (Escherichia phage tunzivis, complete genome) position: , mismatch: 10, identity: 0.688

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtattcacattgaggataa	Protospacer
. .  .**************.********...

138. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to LR596614 (Escherichia phage vB_Eco_SLUR29 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtattcacattgaggataa	Protospacer
. .  .**************.********...

139. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to NC_048206 (Escherichia virus vB_Eco_mar001J1 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccatattgaggataa	Protospacer
. .  .***********.***********...

140. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to LR027385 (Escherichia virus vB_Eco_mar001J1 strain vB_Eco_mar002J2 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccatattgaggataa	Protospacer
. .  .***********.***********...

141. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MN850634 (Escherichia phage tinuso, complete genome) position: , mismatch: 10, identity: 0.688

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtattcacattgaggataa	Protospacer
. .  .**************.********...

142. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to NC_047938 (Escherichia phage SECphi27 genome assembly, complete genome: monopartite) position: , mismatch: 10, identity: 0.688

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtattcacattgaggataa	Protospacer
. .  .**************.********...

143. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to NC_049819 (Escherichia phage atuna, complete genome) position: , mismatch: 10, identity: 0.688

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggacaa	Protospacer
. .  .***********.**.*********..

144. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to NZ_CP023318 (Bacillus megaterium strain A plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

acgttttccatttttctttaattttatttata	CRISPR spacer
ttactaggcattgttttttaattttatttatg	Protospacer
 ...*   **** **.***************.

145. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 10, identity: 0.688

acgttttccatttttctttaattttatttata	CRISPR spacer
gttgcttctatttttctttaatttcattagga	Protospacer
..  .***.***************.*** . *

146. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MN693725 (Marine virus AFVG_250M494, complete genome) position: , mismatch: 10, identity: 0.688

acgttttccatttttctttaattttatttata	CRISPR spacer
ttgtttttcatttttctttactttttaaggtt	Protospacer
 .*****.************ ****    .* 

147. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MN850643 (Escherichia phage tiwna, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

148. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MN850582 (Escherichia phage ityhuna, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

149. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MF564201 (Escherichia phage vB_EcoS-95, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

150. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to NC_049817 (Escherichia phage tonnikala, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

151. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to LT841304 (Escherichia phage vB_Eco_swan01 genome assembly, chromosome: I) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

152. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MN850586 (Escherichia phage orkinos, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

153. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MN781674 (Escherichia phage vB_EcoS_XY3, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

154. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MK962751 (Shigella phage JK16, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

155. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MN850638 (Escherichia phage tunus, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

156. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to NC_049815 (Escherichia phage tonn, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

157. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MN850606 (Escherichia phage tuinn, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

158. spacer 3.6|709288|32|NC_013162|CRISPRCasFinder matches to MN850641 (Escherichia phage tonijn, complete genome) position: , mismatch: 11, identity: 0.656

actcttttgcgacgtattcatattgaggacgg	CRISPR spacer
ggcagcttgcgacgtatccacattgaggataa	Protospacer
. .  .***********.**.********...

159. spacer 3.7|709364|32|NC_013162|CRISPRCasFinder matches to MK554696 (Fusobacterium phage Fnu1, complete genome) position: , mismatch: 11, identity: 0.656

acgttttccatttttctttaattttatttata	CRISPR spacer
ctacaccgaatttatttttaattttatttata	Protospacer
 ... ..  **** *.****************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1032205 : 1042466	12	Riemerella_phage(25.0%)	NA	NA
DBSCAN-SWA_2	2354804 : 2362729	9	Acanthocystis_turfacea_Chlorella_virus(14.29%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_013162|1032205:1042466|DBSCAN-SWA
AATGAGTTTAATAAAAAAAGCAAATGAGCTTACAATTCAGACTAAAATTAAAGCCCTTATATATGGGCAGGCTGGTACAGGGAAGACTACCCTTGCGCTATCATCACCAAAGCCGCTACTTTTTGACTTCGACAACGGCGTACACCGTGTGAACTTCGCACACTTGCAAGATGTGGACACTGTACAGATACGCTCTTATCAGGACTTCTTGGACGTGCTTGCGAATGAAAATCTAACTCCTTATGAAACCTTTGTTATTGATACAGGAGGAAAGATGTTAGACTTTATGGGCGAGTATATCATTAAGAATAACCCCAAAATGGGAAAAGCAAATGGTATGCTAACACTACAAGGCTTTGGAGAACGTAAGATGATGTTTTCAGCACTTGTAAAACGTATTAGCATAATGAACAAGCACGTGGTATTCGTCGCTCATAGGGAAACAAAAACAGAAGGCGACGACACTCGCTACATTCCTCAATTCGGAGGCACAAACTATGACAACCTTGTGACAGAGTTAGACCTTGTAGGGTATGTAGAAGCGCAAGGTCGTGAGCGTACTATCACATTTGACCCCACTTCACGCAATGACGGCAAGAACTCGTGCAATTTGCCTCCGCTCTTTAAGATACCTACCATTATTGATGAGCAGGGCAACCCTACCGCACCTAACGACTTCTTCACAACGCACGTAATTGAGGCGTATAATGCGAGATTAGAACAACACCGCAAGGCTAATGAGGCATACCAAAAGCTCATTAAAGAGATTGACGACAATATAGCGGTTATCACAGATATAGACAGCCTCAACGAAACTGCTCAACGAATACAGGAGTGGCAACATATCGGCAACTCTAAGATAGTAGCGGGGCGCAAACTCAATGAGAAAGCGGCGACTTTGAATGCAAAATTCAACAAAGAAAGCAAGCAGTATGAAGCAGTATAATATATATCCTACGTTGTTGGATAGTTTTACCAACTATCTTAATTCATCAGTAATCTATCAGCAATTTTGGGGCTCATCTGAAGCCCCAACGCTGACAGAGGAAGAGTACGAGCGTCAAGCATTTCAAGAACTCATTAACCGCATTAATAGAGTGCCTTTTGAGAGTGAAGCTGCTGACAAGGGTACAGCGTTCAATGAGATTATAGACTGCATAGTTGAGGGGCGCAAGAGTACTAAGATAGATATTCACAGCGAGGGCGAGGTTATAACAGCGACAATCAATGGCAGGATATTCGTGTTTTCAAAGGAACTTGCTAAGAGCATTGCAACGCCTTTGAAAGAGGAAAACGCACTTACTCAATATCGAGTTGAGGGTACTATTAGCACTCAATATGGTGAAGTCTTTTTGTATGGATATTTAGACTACTTGCTACCATTCAAGGTGGTAGATTTAAAGACAACAGGCAAATACAATGCTTTCAAGTACCGCAACAATTGGCAACACATTGTATATCCTTACTGCTTGAACCAGCAAGGTGTTGAGATAAGTAATTTTGAATATTTAGTCACCGATTTTAAGAGTGTGTATAAAGAGACTTACGCTTATATGCCTAAGTTAGATATGCCACGATTAAATGAGGTATGCGAGCGGTTTATTGAGTTTTTGGAGAGCAACCGAGAACTAATTACTGACAAGAAGATTTTTAATGAAAAAACTGCATAAAAGTAGAAGTTTTTATAAACACGAATGAGTAAAACCAGCAGTCGTGAGGTTTTCGCACCTAAGCTTTTCAAGAAATAGTAAGTAGACTGCTACCTCTTATAGATGTGGGAGAGAACCCCTTAAATAAAATAAAATTTAAAGGTTTTTCTAAAATAGAGAACGGCACAGGTTTTTGGCTTATAAAAACAGTAATTTAATTTAAAAACACTATGGAAATACAAGGACAAATTAAAGTAATATTTGCTACTGAAACAGTAGGACAAAATGGCTTTCAAAAGCGTGATTTGGTTATCACCACCGATGGGCAATATCCACAAGATATTATCATTCAATTTACACAAGGCAATTGCGCATTGTTGGACACCTTACAAGTAGGGCAGAGGGTAAAAGTACACTTTAACCTGCAAGGGCGGGAATGGACAAGCCCGCAAGGTGAGGTGAAATACTTCAATACAGTATTAGGGTGGAAAATTGAACTCATTCAAACCACGAATGTAGCGCAATCTCAATACCAACAATCTCCCCAAGGTTACGCACAAGCACCACAGGGATATACACCCCCAGCGCACCCTCCACAACAAGGGCAACCGCAATACCAGCAGGCGCAAATTTTTAACAATATGGGGCAAGCACCCGCACAAGAAGATGACGGAATGCCTTTTTAAGGAAAAACAAAAAGCAAGTATCAAAAGGGATAGTAGCAGGTTCGAGTCCTGCCTTGCTTTCAAAGATAATAACAATGAAAAATATACAATTAATAACGATAATAGTATGCTTGTTTTTAGACTTTTCCCTAATCATTGGTAAAGACTACATTAGAGCAACGCACGCAATGGTAATAGCAATATTCCTATTGTTAATATTGAAAGATAATGAAAATGACAACGAATAATGGAAGCACTAAAAAAAGAAGCAAAAGATATTCAGAGTTATTTAGAAATTGAATGTTCTGATAGCCCTGAGGAAATGGTAGAGCGCATTAAAACGCTATCTGTTTATTTAGCACGTAGTGGAGAAATGCTTGCAAAGGCAAAGTACCTCTACAACCAACGTACAACGCTGGAAATTACAAAAACTATCATTGCCATAGCAAAGGAGCAATATCTATCGGCAACAGCTCAAAATGCCTTAGTTAAAGGTATAGCTCAAGATGAACAATTTCTTGTAGATTGGGTGGAGCGTATCAACCGCTCTTGTACTCATCAGATAGAAGCCCTTAGAAGTCTTTTGAGTTATGAGAAAGAGAATTTAAGGATAACAAAAACAGGGTATTAAGAAAGTAAAAAATATTTAACTATGTATGAAATAACAAACACAAACTATCAGCCTATGCAAGAGTTGATTAAAATCACCGAAAAAAATGGCAATAAAGCAGTATCAGCAAGAGAATTACACAAATTCTTAGAAATTACTGAAAGATTTAGTAATTGGTTTGAAAGAATGTTGCAGTATGGGTTTGTTGAAAACCACGATTTTACAAGTGTTAAAAGTTTTACGCTTGTGAATAATGGTGCGCAAAGAGAGTTAGAAGACTACGCCCTCACTCTTGATTGTGCAAAAGAGATTTCAATGCTACAACGCTCTGAAAGGGGCAAAATGGCACGCCAATATTTTATTGAGTGTGAAAAGCAACTAAGAGCAAAAGAACAAGCACACCAACAAATTCCTCAATCATTTTCAGAAGCATTGCGATTAGCAGCTGAACAAGCCGAGAGGATAGAAGCCCAACAAAAGCAACTGCAAGCGCAAGCGCCTAAGGTATTATTTGCAGACACAGTAATAGGCTCTCAATCTTCCTGCCTTATTGGTGAACTTGCTAAACTCATCACTCAAAAAGGCTATGAGATAGGAGAAAAGAGGCTTTTCAAGTGGTTACGAGAAAATCACTACTTAGGCACACGAGGCGAGTACTATAACATTCCTAACCAACAATACATTGAGCAAGGACTTTTTGAATTAAAGAAAGGCACACGCTCAGGAAGCGGCGGGGTAATGCACACTACTATTACTCCAAAAGTAACAGGCAAAGGGCAAGTTTATTTTGTTAATAAGTTCCTTAAAACAATATAAAAGAATTGTAATTTTTCCATTGTGCACCCCGATAGGCAAGCACTCACGTTCGAGCCGTGAGCGGGGGCTATAAAAACCGATTTGAAAGGAGATTGAGTGCGCATAAATCTTTTTTTAAATCTCTAATTTCAAATCAAAAAATGAATGAGTATCAAGAGTTTTTAAAATCAAAGGAACGAAAAGTAGCCGAAGCGGGTTTTGAACTTCCTGATGAAGAATTAAACCCTAACCTATTCAACTTTCAGCGTTACATCGTGAGCAAAGCACTAAGAATGGGGCGGTATGCCATATTCGCCGATTGCGGACTTGGAAAGACCTTAATGCAATTGGAATGGGCACACCAAGTAAGTAAGCACACACAGAAGCCAGTGCTAATACTTTGCCCTCTGGCGGTAGCCTATCAAACCATATCAGAGGGGCAAAAGTTCGGTATTAAGGTAGAAAAGTATCACGACAACGAACCATTACAAGGCGTGTACATCAGCAATTACGAGCAGTTGGATAATATCAATACTGCTCAATTCGTAGGGGTAGTGCTTGATGAGAGTTCAATATTAAAGAACTTCACCGGAAAGTATAAGAATGCCTTAATTAAGGCTTTCAAAAACACTCCTTACAAATTGTGTTGTACGGCAACTCCAAGCCCTAATGACTTGAATGAGATAGGCAACCACTCCGAGTTTCTTAATGTATTAGATGCTCAGGATATGCGGGCTAAGTGGTTCGTGCGTGATGAGGGAATGAACAACTACCGCCTTAAAGGACACGCCACTAATGACTTCTATGGGTGGATTAGTTCGTGGGCAACTATGCTTACAAAACCCTCAGATATAGGATTTAGCGCTGAGGGCTATGAGTTGCCAAAACTAAACTACATCGAAAAGGAAATACAGACACAGAAGCGTGATAATGGTATGCTTTTCAACCCTTACTCGGTAAGTGCTACCGAGTTCCAAAAGGAATTACGCAACACACTTGACCAACGCATTGAAGCGGTAGCCGAGATTGTGAATAATTCCGATGAGGCATTTATTGTTTGGGTAAATCAAAATGAAGAGGAAAAGAAAGTACTTGAACTCATACCCGATGCGGTAGCGGTGAATGGTAGCGAAAAAACAGAGGTCAAAGAAAAGAAACTACTCGGATTTGCTAATGGTGAATTTAGGGTATTGGTAACCAAGAAGAAAATAGCCCAGTTCGGTATGAATTTTCAGAATTGCCATAATCAAATATTCGCAAGCCTTGACTTCTCATTCGAGGGCACATACCAAGCCGTAAGGAGGTCTTATCGCTTTGGACAAACAAAAGAAGTAAACATCTATTTCATAACCACTGACACAATGGAAAATGTAAAACAAACAAGAGAACGCAAAGAACAACAATTTAAGGAAATGCAGGACCAGATGAATAAATTCATAAACGGTAACGCTTTCGGACTACTCAATTCGTATGAGTTTAAAGAAGTGAAAACGCCTAATTATTGGCTGATGAAAGGCGACAGTTGCATTGAGATTAAACGCATTCCTGATAACTCAGTAGATTTAATCATATTCAGCCCCCCGTTTAGTTCGTTATTCACCTACTCTAACTACATTCACGATATGGGGAATAATGAAAGCCACGAAGATTTCTTTAAGCAATACACATTCCTTTTACACGATTTGTATAGAATATTGAAGCCTGGCAGGCTAATGGTTTGCCACACCAAAGATTTGGCGGTATATAAGAATTCAAGCGGTTATACCGGACTATACGACTTCACGGGAGACCACCATAGAGCCGTTGAGGCGGTAGGATTTAAATATCACTCTAAGGTGAATATCTGGACCGACCCAGTTTTGGAAATGCAACGTACCAAAACGCAACGACTTCTATACAAGCAACTGCGTAAGGATAGTAGTTACACGGGGGTAGGGCTACCTGAATATTGCACTATATTTCGCAAGTGGGAAGGAAATGAGGAAGATTGGACACCAATTAACAACAAGAATAAAGAGAATTTTCCATTAGATGTTTGGCAACATTGGGCATCGCCTACTTGGAATGTAGAGAAGGGAGATATTGACCATCTACACGAAGTAATGGAAGATTACAAAGTAAATACGTGGTTTGATATTAAGCGTACTGATGTACTCAACGGAAAGAAAGAGGCTACTGATTTAGGCGATGAAAAGCACATTGCACCGTTGCAATTATCAGTTATCAAGCGTTGTGTGCAGATGTGGAGCAATAAGGGAGAAACTGTATTTACACCATTCTTAGGAATAGGAAGTGAGATATACGAGGCAGTTACATTAGAACGCTACGGTATAGGCATAGAACTCAAAGATAAGTATTTTGAAACCGCCGTTAAGAATATTAATATGGTAACCGAGAAGCAACGACAATTAACGTTATTCTAATAACTCATTCATTTTTCACCTCCTTGCTTGTCGAGGGTGAGGGGGTGTTTTTAAGAATAAAATACCTACACTATGGAACGAGATACATTTGTGTTTTACAAGGATTGGTTGAATGTTATTCGGGATTTGCCAAGTGAGGTTCAGTTGGAAGTTTATCAGGCTATTGCGGAATATGCCATATACGGTAACTTGATTGAACTAAAACCACTTGCAAAAGTAGCATTCGGATTTGTAAAGCAAACAATTGATAGGGATACACAAAAGTATATATCAATTAAAGAAAAGAGAAAAGAGGCAGGAGTAAAAGGAGGTAGGCCGCTGAAAAACAAAGACTTAGAAGAAAGCAAAGAAAAGCAAAAAAACCAATTGGTTTTTGAAAAAAGCAAAAAAAGCAAAAGCCCCCTTAATGTTAATGTAAATGTAAATGATAATGTTAATGATATTTCTTTTTTAGAAAAAAAGAAACAAAAAAGCGTGTGTGTCAATTTTGGAGAGAAAGAAAAAAAAGAAGAGGCTTTAAACGCTGAAAAAGAAACCTCCCCCCAAGTTGCGCCCGCCCCCCCTCCTTTCAATTTCAAAAAAGCAATGCTTGCGGAAGGTTTTGCCTCCGAACTTGTAGATGAGTGGTTAAAAATACGGAAGGCAAAAAAAGCCATAAACAGCGAAATTGCCTTTAAAACATTCATTGAGCAAGTGAAAAAAACAGGGCAAGACAAGAACGCTATCCTTGAAAGGGTAGTACAGAAGCAATGGAGAGGCTTTGAGGCGAGTTGGCTACAAGCAGACCAAATACCTCAACAGACCAATAATAATCAAATAATCTTAGATGAAAATGGAAAAATCATTACAAATGAACAACAGCAACAATCTACAAGCGATAAACAACGGTTTTATGCCGGTCGCCAAACAGCCGATAACATTAGAAATAATATGCAAGGCTGGGGAGCTCACACCTTTGGCAATAGCTAAGAAAGGGCACGAATACCCACGACTTAGAGACCTTGACCGCGAAGTAATTGCCCCAACATTCGGAATGGTATTCACTCGCATTGCTACTCTTGTAGGGCTTAAGGGAGAAATCGACCCTTTACAAAAGCAGGAAATTTGGAACGCTGTTTTTAGCCGTTTTTCAGGACTTTCTTTTCAGGAGATATACAAAGCCTTTCAGATGGACAGAAGCGGGGAATTTGGTGACGTAACCGACCACTATCAGTTTTTTGACGTGTCATACGTCTGCAAGGTTTTGGGAAGATATCGTCAGTGGTTGCAAGACACCCAGCGAGCGCATAATATTAACATTTCACAATTACCCGAAAAACAAAATACGATGACAGAGGAAGAAACAGAAGCCTCATCGCTAAGTTGGCTTATCAATCATTTTGAGGAATATAAGGAAACAAAGAAGTTGCCAATAATATCCGTGCCTATATACGACGCACTCTATCAGCGAGGTATATTACAACCTTACTTCGCTACACTTACAGAGAAGGACAAGCAATTAATGCGAGCGGAAACTGAGAAGCGACTTCGACAAGAGCAGACGAAGGCTAAGGATAAGAAGGAATTTAGTGCTATTAAGGCACTGTTAGAACAATATCAGAAGGGAATAAGCGACCCTGAGGGTAAACTGAGGAGCTTTAAGAAGGAAGATACTTTGAAATTCTTCTACGACTACCTCATTACGCAGGGCAAGGAGCTTTCAGAATTATTAACACCTAAAAAACAATGAAACTCATAGACCTATTCAGCGGTATTGGTGGCTTTTCGCTCGGATTTCAGCGAGCAGGCTACCATTTTACCGAGCATTATTTCAGCGAAATAGATAAACACGCAATCGCAAACTATAAAAACAATTTTCCAAATGCAAAATACATCGGAGATATTACCACTCTTCACGGAGGAGACTTTACAGGAATTGACATTATCACTTTCGGTTCGCCTTGCCAAGATTTCAGCCTTGCTGGGAAACGTGCCGGACTCGCAGGCGCAAAAAGTAGCCTTATCCAATACGCAATTGCCCTCATTGCTAACGTCAGACCAAGTATTTTTATCTGGGAGAACGTTAAAGGAGCTTTCAGCTCCAATGCTGGCGCAGACTTTTGGGCAATTCTCCAAGCCTTTACCCACATTGGGGGTTATAGACTTGAATGGCAATTGCTTAATACACGCTGGGTATTACCCCAAAATCGAGAGCGGATATATCTTATCGGACATCTTGCAGGACGAAGTGAGTGCGGAGTATTTCCTATCACAGAAGATGATAGACTGTTTAAACGGGAGACAAGGAAAGAAAATGGGGAATTTCCAAGTATAAAAACTTCACCTGCACGAACAATAACATCACGTTATCACAAAATGGGGAGCAATGATACTTACATACAAGTAGGTACTTACCGCACTCACAACGACGGTAAGGGATTTAGAGAAGTAAAAAGCAATATTGCCCCTACTATCCCCGCAAGAGCAAGGGAAGATGGCAGTGGTATGCCCGTAATACAACTTAATCCATCTAAGGAATCCAACGGCAGGCAACCCTATCAGCAAAATAGAGTTTTTGACGAAAAAGGAATAAGTCCCGCTCTAACAAGACACAATTCTGACTTTATTATAAAGCAACGTTCACGAGGAAAAAACAAAGGTGCAGACCTTAAAGTCTGCCCTACAATATCGAGCAACTCCTTTCAAGAAAATAACCTACTGGGAGGCATTAGAAGACTTACCGAAATAGAATGCGAACGCCTGCAAGGATTTCCTGACAATTGGACACAATACGGCGACTACAACGGCATAATAAAACCAATAGCCAAAACACAACGCTACAAGCTTATTGGTAATGCCGTAACAGTGGACATAGTAGAATTGATAGCAAAACGATTAAAATTTACAAAACAATGAAAAAACAATTATCACAAGAACGAGAAGCAGTAGAATTATTCGAGTACGCTGCACGTAATCTCATCAAGGAGTTTTGCGACAAGCAAGACCTACAATTTGAATTCGACAATTACGATGTAGGTATAGGAATTATATGCCTATCGGATTACGTCTTTAACATCGAGGATATATACTTCGATATGAAGCACGATAAACCCAAAGATAAAATACTGCAATGGTACGACTATCTGCTAACACACGAGTCCAACATCAATTACCGCTCCTACTGTATGGGAATGAGAGAAGAATTAATAACTAAAAATATCAACAAATGAGAACAATAAAATTTAGAGGATTTACGGACTGCTTAGTTCAAGATAAATGGGTTTATGGCTTTTTAAGTGAAGAAAATAAAATAAGGAAAACAACAAGCCTTATTGACTATGAAGTAGATAAAGCATCTATTGGACAGTTTACAGGACTGTATGACAAAAACGGCACTGAAATCTATGAGGGCGACATTCTTGCCCACGATTATGGAGATTACAGCCTTATTGTGTACCGAGAGGAATGTATGGCATTCTGTCGTGTCGATGCCAAAGATGTAGGCAACATTAATGGGTATTTCAACCTTTCTGAACACGCTTGGCGTTCGTGTTTGCAACGTGCAGAAGTTATTGGAAACCAATATGAAAACCCCGAATTGTTAAATTATAAAGAAGAAGATTAAACAATGAAAACAATCCAAGAACTCATTCCACTTATCCAAGAGTGGGCAAAAGAAAGAAAAATCTACGAAGAGCTAACCCCCTTTGATGAACTCCTGAAAACCCACGAGGAAGTCGGCGAACTTATCAAAGCGTGTTATGACAATGACCGCATAGGCATACGCGATGCCATAGGCGATGTAATGGTTACCCTTATTAACTATTGTAATTTAATAGGTGAAGATTTTGTTAATCTTTATGAAATATCATTGAAACAAACAAAATGCGTCACAACTAAAACTATATCAGCAGTTAATGCTAATTCTTACGTTGCTAAAATGATAACTGATGAGATTGTAAGTTTTTGCAAAAACGGAATAACCTACACTTTTTATAACATATCAGACGTGCTTAACGAATTGCGCCTTGTAACTGAATTAGAAGGCACAACCTTAGAAGCCTGTCTGAACCTCGCTTACAACGAAATCAAAAACAGAAAAGGCAAAATTATTAACGGTAAATTTATCAAAGATGAATAA

Protein sequences of DBSCAN-SWA_1

>NC_013162|1032205:1042466|1033136_1033874_+|WP_015782108.1|DBSCAN-SWA
MKQYNIYPTLLDSFTNYLNSSVIYQQFWGSSEAPTLTEEEYERQAFQELINRINRVPFESEAADKGTAFNEIIDCIVEGRKSTKIDIHSEGEVITATINGRIFVFSKELAKSIATPLKEENALTQYRVEGTISTQYGEVFLYGYLDYLLPFKVVDLKTTGKYNAFKYRNNWQHIVYPYCLNQQGVEISNFEYLVTDFKSVYKETYAYMPKLDMPRLNEVCERFIEFLESNRELITDKKIFNEKTA
>NC_013162|1032205:1042466|1036084_1038346_+|WP_015782112.1|DBSCAN-SWA
MNEYQEFLKSKERKVAEAGFELPDEELNPNLFNFQRYIVSKALRMGRYAIFADCGLGKTLMQLEWAHQVSKHTQKPVLILCPLAVAYQTISEGQKFGIKVEKYHDNEPLQGVYISNYEQLDNINTAQFVGVVLDESSILKNFTGKYKNALIKAFKNTPYKLCCTATPSPNDLNEIGNHSEFLNVLDAQDMRAKWFVRDEGMNNYRLKGHATNDFYGWISSWATMLTKPSDIGFSAEGYELPKLNYIEKEIQTQKRDNGMLFNPYSVSATEFQKELRNTLDQRIEAVAEIVNNSDEAFIVWVNQNEEEKKVLELIPDAVAVNGSEKTEVKEKKLLGFANGEFRVLVTKKKIAQFGMNFQNCHNQIFASLDFSFEGTYQAVRRSYRFGQTKEVNIYFITTDTMENVKQTRERKEQQFKEMQDQMNKFINGNAFGLLNSYEFKEVKTPNYWLMKGDSCIEIKRIPDNSVDLIIFSPPFSSLFTYSNYIHDMGNNESHEDFFKQYTFLLHDLYRILKPGRLMVCHTKDLAVYKNSSGYTGLYDFTGDHHRAVEAVGFKYHSKVNIWTDPVLEMQRTKTQRLLYKQLRKDSSYTGVGLPEYCTIFRKWEGNEEDWTPINNKNKENFPLDVWQHWASPTWNVEKGDIDHLHEVMEDYKVNTWFDIKRTDVLNGKKEATDLGDEKHIAPLQLSVIKRCVQMWSNKGETVFTPFLGIGSEIYEAVTLERYGIGIELKDKYFETAVKNINMVTEKQRQLTLF
>NC_013162|1032205:1042466|1034765_1035149_+|WP_015782110.1|DBSCAN-SWA
MEALKKEAKDIQSYLEIECSDSPEEMVERIKTLSVYLARSGEMLAKAKYLYNQRTTLEITKTIIAIAKEQYLSATAQNALVKGIAQDEQFLVDWVERINRSCTHQIEALRSLLSYEKENLRITKTGY
>NC_013162|1032205:1042466|1032205_1033150_+|WP_015782107.1|DBSCAN-SWA
MSLIKKANELTIQTKIKALIYGQAGTGKTTLALSSPKPLLFDFDNGVHRVNFAHLQDVDTVQIRSYQDFLDVLANENLTPYETFVIDTGGKMLDFMGEYIIKNNPKMGKANGMLTLQGFGERKMMFSALVKRISIMNKHVVFVAHRETKTEGDDTRYIPQFGGTNYDNLVTELDLVGYVEAQGRERTITFDPTSRNDGKNSCNLPPLFKIPTIIDEQGNPTAPNDFFTTHVIEAYNARLEQHRKANEAYQKLIKEIDDNIAVITDIDSLNETAQRIQEWQHIGNSKIVAGRKLNEKAATLNAKFNKESKQYEAV
>NC_013162|1032205:1042466|1035203_1035944_+|WP_041546926.1|DBSCAN-SWA
MQELIKITEKNGNKAVSARELHKFLEITERFSNWFERMLQYGFVENHDFTSVKSFTLVNNGAQRELEDYALTLDCAKEISMLQRSERGKMARQYFIECEKQLRAKEQAHQQIPQSFSEALRLAAEQAERIEAQQKQLQAQAPKVLFADTVIGSQSSCLIGELAKLITQKGYEIGEKRLFKWLRENHYLGTRGEYYNIPNQQYIEQGLFELKKGTRSGSGGVMHTTITPKVTGKGQVYFVNKFLKTI
>NC_013162|1032205:1042466|1041953_1042466_+|WP_015782118.1|DBSCAN-SWA
MKTIQELIPLIQEWAKERKIYEELTPFDELLKTHEEVGELIKACYDNDRIGIRDAIGDVMVTLINYCNLIGEDFVNLYEISLKQTKCVTTKTISAVNANSYVAKMITDEIVSFCKNGITYTFYNISDVLNELRLVTELEGTTLEACLNLAYNEIKNRKGKIINGKFIKDE
>NC_013162|1032205:1042466|1034083_1034539_+|WP_015782109.1|DBSCAN-SWA
MEIQGQIKVIFATETVGQNGFQKRDLVITTDGQYPQDIIIQFTQGNCALLDTLQVGQRVKVHFNLQGREWTSPQGEVKYFNTVLGWKIELIQTTNVAQSQYQQSPQGYAQAPQGYTPPAHPPQQGQPQYQQAQIFNNMGQAPAQEDDGMPF
>NC_013162|1032205:1042466|1041551_1041950_+|WP_015782117.1|DBSCAN-SWA
MRTIKFRGFTDCLVQDKWVYGFLSEENKIRKTTSLIDYEVDKASIGQFTGLYDKNGTEIYEGDILAHDYGDYSLIVYREECMAFCRVDAKDVGNINGYFNLSEHAWRSCLQRAEVIGNQYENPELLNYKEED
>NC_013162|1032205:1042466|1041237_1041555_+|WP_015782116.1|DBSCAN-SWA
MKKQLSQEREAVELFEYAARNLIKEFCDKQDLQFEFDNYDVGIGIICLSDYVFNIEDIYFDMKHDKPKDKILQWYDYLLTHESNINYRSYCMGMREELITKNINK
>NC_013162|1032205:1042466|1038418_1039315_+|WP_015782113.1|DBSCAN-SWA
MERDTFVFYKDWLNVIRDLPSEVQLEVYQAIAEYAIYGNLIELKPLAKVAFGFVKQTIDRDTQKYISIKEKRKEAGVKGGRPLKNKDLEESKEKQKNQLVFEKSKKSKSPLNVNVNVNDNVNDISFLEKKKQKSVCVNFGEKEKKEEALNAEKETSPQVAPAPPPFNFKKAMLAEGFASELVDEWLKIRKAKKAINSEIAFKTFIEQVKKTGQDKNAILERVVQKQWRGFEASWLQADQIPQQTNNNQIILDENGKIITNEQQQQSTSDKQRFYAGRQTADNIRNNMQGWGAHTFGNS
>NC_013162|1032205:1042466|1040071_1041241_+|WP_015782115.1|DBSCAN-SWA
MKLIDLFSGIGGFSLGFQRAGYHFTEHYFSEIDKHAIANYKNNFPNAKYIGDITTLHGGDFTGIDIITFGSPCQDFSLAGKRAGLAGAKSSLIQYAIALIANVRPSIFIWENVKGAFSSNAGADFWAILQAFTHIGGYRLEWQLLNTRWVLPQNRERIYLIGHLAGRSECGVFPITEDDRLFKRETRKENGEFPSIKTSPARTITSRYHKMGSNDTYIQVGTYRTHNDGKGFREVKSNIAPTIPARAREDGSGMPVIQLNPSKESNGRQPYQQNRVFDEKGISPALTRHNSDFIIKQRSRGKNKGADLKVCPTISSNSFQENNLLGGIRRLTEIECERLQGFPDNWTQYGDYNGIIKPIAKTQRYKLIGNAVTVDIVELIAKRLKFTKQ
>NC_013162|1032205:1042466|1039379_1040075_+|WP_143713256.1|DBSCAN-SWA
MVFTRIATLVGLKGEIDPLQKQEIWNAVFSRFSGLSFQEIYKAFQMDRSGEFGDVTDHYQFFDVSYVCKVLGRYRQWLQDTQRAHNINISQLPEKQNTMTEEETEASSLSWLINHFEEYKETKKLPIISVPIYDALYQRGILQPYFATLTEKDKQLMRAETEKRLRQEQTKAKDKKEFSAIKALLEQYQKGISDPEGKLRSFKKEDTLKFFYDYLITQGKELSELLTPKKQ

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015782107.1|1032205_1033150_+	AAA family ATPase	A0A2K9V421	Faecalibacterium_phage	1.2e-37	34.3
WP_015782108.1|1033136_1033874_+	hypothetical protein	NA	NA	NA	NA
WP_015782109.1|1034083_1034539_+	DUF3127 domain-containing protein	S0A2Y4	Cellulophaga_phage	1.3e-26	56.0
WP_015782110.1|1034765_1035149_+	hypothetical protein	NA	NA	NA	NA
WP_041546926.1|1035203_1035944_+	phage antirepressor KilAC domain-containing protein	F5A3D4	Riemerella_phage	6.9e-81	63.7
WP_015782112.1|1036084_1038346_+	DNA methylase N-4/N-6 domain-containing protein	A0A218M7A5	Flavobacterium_phage	2.4e-169	43.2
WP_015782113.1|1038418_1039315_+	hypothetical protein	F5A3F1	Riemerella_phage	3.8e-17	55.4
WP_143713256.1|1039379_1040075_+	hypothetical protein	NA	NA	NA	NA
WP_015782115.1|1040071_1041241_+	DNA (cytosine-5-)-methyltransferase	A0A1B1IVS4	uncultured_Mediterranean_phage	8.2e-44	28.6
WP_015782116.1|1041237_1041555_+	hypothetical protein	NA	NA	NA	NA
WP_015782117.1|1041551_1041950_+	prophage Lp2 protein 26	A6M997	Geobacillus_virus	6.4e-09	42.1
WP_015782118.1|1041953_1042466_+	MazG-like family protein	K4P090	Acinetobacter_phage	3.6e-12	30.3

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NC_013162|2354804:2362729|DBSCAN-SWA
TATGAAAGCCGTATTTTTAGACCGCAACACGCTCTCTGAGCGCATAGATGTAGATATCCCGAAAGGGATAGCCCAATGGGTAGCCTTCCAAAAAACAGCTCCCGATGAAATTGTTCAACGTCTCAAACCTGCTGATATAGCTATCGTGAACAAGGTGAAACTCGATGAGAGTATCCTTAGGCAGTTGCCTAACCTTAAGCTCATTCACCTTACTGCTACGGGTATGGATAATATCGATAAAGAGGCTGCGAAAGCCTTGGGTATAGAAGTGAAAAACGTAGCGGGTTACTCTACTGAAAGTGTAACAGAACACTTCTTCTTGTTGTTACTATCGGCTATGCGTGCCCTAAAAACCTATCACACAAGTGTAGAAGATGGTACTTGGGAAAAAGATGGTCGTTTTTGCCTTACTGAGCCACCGGTGTTTGAATTGCATACCAAAACCTTAGGGATTATAGGAGTAGGCAACATAGGGAAAGCTATTAGTAAAGTAGCTGAAGCCTTTGGTATGAAAGTGCTATGGGCTGAACGCCAAGGTAAAGCACCACGTAGTAAAGAATATACTGAGTTCGACAAGGTATTGGCACAGAGTGATATCATCTCGCTTAACTGTCCGCTTACTCCTGAGACTAAGCATTTAGTAGATGAAGATTTCATCTCTAAATTGCGTAAAAAACCATTAATTATCAATATGGCTCGTGGAGCTATAGTAGACCCTCAGGCGGTATATGAAGCTATAGAAAGCAATCGTATAATGGGCTTTGCTACCGATGTGTTTGAAGAAGAACCACCAATGGCTAACGACCCTCTACTAAAAATAGCCAACCACCCTCGTGTGATTTACACTCCTCACGTGGCTTGGGCGAGCGAATACGCACAAGATAAGTTATGGCGTATCTTGAAACGCCAAGTAGAAGATTTTATCGTAAAATATAAAACAGAGCATAAGGAAAATGAAAAAGCATAATTTTAGCGCAGGCCCCTCTATCTTAGCACCTGAGGTATTCCAAAAAGCCTCTAAAGCCTTATTAGATTTTGAGGGGACTGGCTTATCTGTAATAGAAATATCACACCGCAGTCCAGAGTTTGTACGCGTGATAGAACGCGCTCGTGCATTGGCATTGGAAATCGCTGGATTGGACGATTCGTACACTACACTCTTCTTGCAAGGAGGAGCTAGTATGCAATTTTTGATGGTGCCATACAACCTCCTCGAAACCAAAGCTGCTTATATAGATACAGGTACTTGGGCTAACAAAGCACAAAAGGAAGCTGCTCTCTTTGGCAATGCCGAAGTGATAGCCTCTTCTAAAGCCGATGGGTATAAGTATATTCCAAAAAATGTGACTGTCCCTACTGATATCGATTATCTGCACATCACTACCAATAATACGATTTACGGTACCGAGTACCACAGTTTACCTCAAACGAGCGTCCCTTTGGTAGCCGATATGAGTTCTGATATTTTCTCACGTCCGTTAGACTACAAGCAGTTTAGTTTGATTTATGCGGGTTCACAGAAGAATTTAGGAGCTTCAGGGTCTACCTTAGTGATTGTAAAGAAGGATTTATTGGGCAAGGTAAGCCGTAAACTGCCTTCGATGATGGACTACCAGTTGCATATTAAAAACGATAGTATGTTCAATACACCTTCTACTTTTGCAGTATATGTAAACCTATTAGTACTCGAATGGATACAAGCACAAGGTGGATTACAAGCCTTAGGCAAACGCAACCGAGCTAAAGCCGATTTGCTTTACGGAGAAATCGACCGCAATCCATTAGTAGTGGGGTATGCTAATAAAGAAGACCGCTCCCTAATGAATGTAGTGTTCAACCTCACTGACGAAAGCACCAAAGAACGCTTTGACGCTTTGTGTAAAGAAGCCAATATCAGTGGAATAAAAGGACACCGCAGTGTAGGAGGCTATCGCGCTTCTATCTACAATGCTTTGCCTTTACAAAGCGTACAAGTATTAGTAGATGTACTTAAAGAATTTGAACGCACCGCGTAAAGAAGAATAATATAGAAAACAAAATAAGTCCGATACAAATATCGGACTTATTTTATATTATACAATATGTTATTTAATCTCTAAGACTTTATAATCAAATGTATTAAGCTTCACAACTACTACAGTTTACAAAATTCATCATCATTTCTTTTGCTACTGATTGACTGCGCTGATAATACAAACTTTTAACTCCTAATTTCCAAGCCTCAATAAGCACTTTATTCACATCGCGAATAGGCATCGCTGAAGGAATATTTAAGTTCAAACTCTGCGTTTGGTCAATGTACGCTTGACGCTGTGCCGCTTGTGATATAATTTCCATCGGTGAAATCTCTTTAAAAGTTTTAAACACATTCTTCTCTAATTGAGATAACTCTTGCAAGTGTTGTACAGAGCCATTATTCAAACGAATAGAACGCCATACCTCTTCATTATTAAGACCTTTTTCCTCCAAAAGTTGAGTGAGATACTTATTTTTGCGCATAAAGTTCCCTTTAGAAAGCCCTACTTTATAGTAATTGCTCGAATAAGGTTCGATACCTGGTGATACCTGTCCTAAAATAGCCGAACTGGAAGTGGTAGGAGCGATTGCCATAGTAGTAGTATTTCGTCTACCATATCCTTTTAAAATTTCTGGTTCTCCATAAATATGAGCTAACTCTTTAGTTGCCTTATCAGCTTCTTCACGAATGTATCTAAAAGCACGGGCATTGAACTGTGTTGCCTCAAAGCTCTCAAAAGGTATCATATTGCGTTGCAAGTAAGAATGATATCCTAATACACCCAAACCTAAAGCACGATGACGAATAGCAAAATTGCGAGCTGCCTGTAAATAGTAATTACCCTTTGTTTTTTCTATAAACTCTGAAAGTACCGCATCTAAAAAGAATACCGCTAACTTTACTGCTTTGGTATCTTTCCACTCATCAAAGAGCTCTAAGTTCATAGAAGAAAGACAGCAAATAAACGATTCATCTTCACTAGAAGGTAACATAATCTCACTGCACAAGTTACTTGAACGAATGAGCATATCCTTATCTTTATACACTTGAGGGCGATTACGATTGGCATTATCCGTAAAGATAATGTAAGGTAAACCTTTTTGCTGGCGAGACTCCAAGACACGAGCCCATAGGCGACGTTTTTCTACATCACCATCTATCATTTCTTGCATCCAATAATCAGGTACACAAATACCAAAGAAAAGATTCTGAATAGGGAATTCTACATCTTTAATTTGTAGAAACTCTTCGGCATCAGGATGGTCTATATCTAAATAAGCAGCAAAAGCACCGCGCCTTACTCCTCCTTGTGATACAACGTCCATAGCTGAATCGAACAACTTCATAAAACTAACCGCCCCACTTGATTTACCATTATCGGTAACTGCAGAACCGCGACTACGCAATTCGCCAAAATAACCAGAAGTACCTCCCCCTATTTTGGTTTGCATAATCACCTCTCCAAGTTTATGAGTAATCCCCTCGATGCTATCAGGTACGTGCACATTGAAACAAGAAATAGGCAAACCTCTTTCAGTACCCATATTTGCCCAAATAGGAGATGAAAAACTAATCCAACCTTTAGTAATCATTTCTTTGAAAGCAGGCTGTAATTCGGGTTTATAAAGCCTATGTGCAGCAGCACTTGTAATGCGGTCTATCGCACCTTCTACGCTTTCTCCTTTTAGTAAATAGCCTCTATTGAGGATTTGTTCAGACTCTTCATTGAGCCACCAAATGTCTTTTTCTTCGTTCATAACTTTTTATTTTCGGGGTGCAAAGTAACAGCTTTATATTCTAATTTCACCCTCTATCCAAAATAAGTTATTAACAAAGTTTTTAACAATATAATAAAATCAGCTTCTTAGGATAATTTTTTAACATACAGTTATACTTTTATATTACTTGAATGGCTAAAATAATAAAAATTAAATGTATGGGAAAGCAAAAACTATTAAAAATAAGAAGATATAGAAAAGTAGAAATATAGCTGTTAATTACTACAAATCAACGTGTTAAAAAGAATTGTTATATTTAAAACAAAATAGTAGTACAATTTTATCTAAAATATTTTGTTCTTTCAGATAACTTTTGTACTTTTGTAGCGTTAAGTATAAAAGGAAATCTTATGTCAGAACTAATTACTAGACCTATACCTATTGATGAAGAAGTAGTGTGGGATAAAACAAAAACTATTATCAGTACTACTGATAAGTTGGGTGCTATTACTGACGTAAATCAAACATTTATAGACGTTTGTGGTTATCCTGCGGTTGAATTATTAGGAAAACCACATAGCATCATTCGTCACCCCGATATGCCTAAAATCATATTTAAGATTACTTGGGATAATATTTTGGCGGGGAGAAACTTTCACGCTATTATTAAAAACTTAGCTAAATCGGGTAAGTATTATTGGGTAATTACCGATTTTGAAGTAGGCAGGAATATTATTGGGGATGTTGTTACTATTATGGCGCGTCAGCATTCAGTACCTAAGTATGTAATTACAGAGCATATTGAGCCTTTATATCAAACGCTCCTTAAACTTGAAAAAATAGGAGATATGGAGCTCAGTAATCGTTATTTTAAGGGCTTTTTAGAAAAACAAGGCAAATCATATATTGAATATATTATGGATATTATGGACGAAAGCAAGCGAGAAATTCACTTTGATCCTATCCCTAATATGCCTCACACTGATACTAACATTGGAGACTATGAAATTTCTGATGATATATTTAGTGAAGAACATCACGAAGAAGAAACTATGATGCAACGCAAGAGTTTCTTTGCAAAATTATTTTCTACGAATTAGAATTTTGCAAATATCACAATAAGAGGAGAGCGTATCTATTGCAATAGATACGCTCTCCTTTTTGGTTCTTTCTATGATTACGATTCTTTCTTGTCTTGAATTTCTTTCTTGTCGTCTTTTAATTTAGCTGACAGTTCCATAGAAATAGCAGAACGTTCAAATTTGATTTTTCCTGAAAGTGTTTCTAAGACACAAGTATCATCAGTAAGTTCTACAATGCGTCCGTGCATACCACTTTTAGTAATTACTTTATCCCCTCTTTTCATTCCTTCAATAAAGTTTTTTTCTTGTTTTTGTCGTCTTACTTGCGGACGAATCATAAAAAAGTAGAATACTAAGATTATCAATATAAGAGGTAGTAAACCACTGTTCATCAATTGTTGCATATTTATTAATTTAATTATTAGTTTTTAGTTATTTTAGAAAATTGTAATTAGGAACTTTTAGCTTTTGGCTTTCAATTATAAAAGTCCTCTTCCTATCTTTTTTATTTGTTGTTTTTCTTCGAGTTCTTTATGTACATTTTTCATTACACCATTAATAAACGCACTACTTTTAGTAGTAGAATATTCCTTGGCAAGTTCTAAATATTCATTAAGTGTTACTTTCACTGGAATACTAGGAAAACTAAGCATTTCACAAACAGCCATTTTTAACAATATACTATCTATTACAGCCACACGATCTTTCTCCCAACCTGTCATTCTAGTAATAATTTCATCCTCCCACTTACTATCATTGAGCACTGCTTTTTTTAGTAACCCTGTAAGAAAATCTTTTTCTTCTTCATCTTTATAAAGTGAAGGAACAAAATATTTATCAGGTGAGGTGGGGAGCACTTCTCTAAATAACCTACTTATATAGGTATTCACAATGGGATAATCATCTACCCAAGTGAGATTATAATCTTCAATATATTCATACATTGTCTCATCGGGAGCTATAATTTCTTCAAAAATAGTCATTAAAAAAGATTTATCAGCTTCAAAACTGCTCTTTTGTTTGTTGTATTTCTTATAAAGCTCACTTTCTACAATGTTTTTATATATAGTACGCACATACTCTTCGTGTATTTCCCAATGATTTATACGTGCATCAGCAATAGCTTCTTGTAATAATGTATTATGAACAATGGCTAAGAGCAAAAGGTTTTCAGAGAATTTTTGATGTACTGTTCTTTCTTCAGTAGTAGCCAAATATTTTTTCTGAGCTACTTTGTGTTGATGAGTTGCCAAAGAATGCAGTTCAATGAAAAGTGATAATATTAATAGATATAGGTGTCGCATTTCATCAGCACTGTTTTGCAAGAACTTCAATTCTTTGTCTAAATCCTGACTTTGGCTCTGACGCATTGCATAAATTGATTGCATTACTTTTGCCCTAATATGTCGTCTTGTAAGCATAATTTGTAAGAACTTTCTTAACTTTATTTTGAGAGTGCAAAAGTAGAAAAAAAGGTTTAACGAGCCAAAAAAAAGCGCTAAAAAAGCACCTAAAATGTTAATTTTTTACTAAAAATCGTATTTTTTCTTGTTTTATACTTGCTATGAAGAAATATATTACTACCTTTGTCCTTATTAACTGTATTTATAAGTTATCATATGAACAAATCAGAATTAATTGATGCAATTGCAGCAGGGTCTGGACTTACAAAAACCGACTCTAAAAAAGCTGTTGAAGCGTTCTTTTCAAGTGTTGAAAAGGCTCTAAAAAAAGGTGACAAAGTAGCTGTCGTAGGATTCGGTTCTTGGTCAGTTGCTAAAAAAGAAGCCAGAGAGGCTCGCAACCCTCGTACTGGTGCAGTAATTAAAGTACCTGCTAAGAAAGTTGTAAAATTCAAAGCAGGGGCTGAATTATCTGAAGCAGTAAACAAAAAGTAATTGCAGTAAAAAAGTCCCTTTCGGTTGAAAGGGACTTTTTTTATTTATTAGTAGATGAGTTAATTAGCATAGAAACCTTATTTAATGATTAATGGTTAATGATTAATGTTTAATTTGGGAGAAGCTTATAGAAAGCTTATAGGAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAAAAGACGAACAATGAACGAAGGAAAAGTGAAGTTAAGTTGATGCTAAAGTAGAGATAAGAAGGAGGAAATTGGTAAACTTCTACTTTGCCAAAAGTCGTAGCACGACGGGCAATTTAAAACTTTGGCAAGGTGCAAAGCGCACGAAAGCGCAAATTAATTCTCTGACAAGACTATAACTAACATTACCAATATGAAAAAGAAGAAAATAGTAGTCCTCACGGGGGCAGGGATTAGTGCTGAAAGTGGTGTAAAGACTTTTCGAGATGCCGATGGCTTGTGGGAAGGTCACGATATAGAACAAGTGGCAACACCTTATGGTTTTGAGAAAGACCCTGAACTTGTATTGAACTTCTACAACGGCTTGCGCAAACAGGTGAAAAATGTGCAACCTAACCCCGCTCACTTATTATTAGCCGAGTTGGAAAAAGAGTACGACGTGGTGATCATCACTCAAAATGTAGATGACTTGCACGAACGTGCGGGTAGCCATCACATTATTCACTTACACGGAGAACTGCTAAAAATGCGGGGAGTAGATGACCCCTATACGCTCTACGACTGTACTGACGACATTAAAGTGGGCGACCTGAGCCCCAGTGGAGCACAATTACGACCTCACATCGTGTGGTTTGGCGAAGATGTACCAATGATTGTAAAGGCTGCCGAAGAGGTAGAAACTGCCGATATAGTGGTTATTGTAGGTACTTCATTACAAGTGTACCCCGCTGCTGGATTGATGAACTGTGCCAAGAAAGATACACCTATGTATTATATAGACCCACGTCCAAGCATCAGTAGTAAAGATAAAATCACTGTAATTAAAGACGTTGCTTCAACAGGGGTAGCTAAAGCTATTGAACTAATAAAAGAATTGAAATGA

Protein sequences of DBSCAN-SWA_2

>NC_013162|2354804:2362729|2361239_2361518_+|WP_002672062.1|DBSCAN-SWA
MNKSELIDAIAAGSGLTKTDSKKAVEAFFSSVEKALKKGDKVAVVGFGSWSVAKKEAREARNPRTGAVIKVPAKKVVKFKAGAELSEAVNKK
>NC_013162|2354804:2362729|2361623_2361863_+|WP_041546837.1|DBSCAN-SWA
MFNLGEAYRKLIGKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQ
>NC_013162|2354804:2362729|2354804_2355770_+|WP_009419717.1|DBSCAN-SWA
MKAVFLDRNTLSERIDVDIPKGIAQWVAFQKTAPDEIVQRLKPADIAIVNKVKLDESILRQLPNLKLIHLTATGMDNIDKEAAKALGIEVKNVAGYSTESVTEHFFLLLLSAMRALKTYHTSVEDGTWEKDGRFCLTEPPVFELHTKTLGIIGVGNIGKAISKVAEAFGMKVLWAERQGKAPRSKEYTEFDKVLAQSDIISLNCPLTPETKHLVDEDFISKLRKKPLIINMARGAIVDPQAVYEAIESNRIMGFATDVFEEEPPMANDPLLKIANHPRVIYTPHVAWASEYAQDKLWRILKRQVEDFIVKYKTEHKENEKA
>NC_013162|2354804:2362729|2356921_2358577_-|WP_002672050.1|DBSCAN-SWA
MNEEKDIWWLNEESEQILNRGYLLKGESVEGAIDRITSAAAHRLYKPELQPAFKEMITKGWISFSSPIWANMGTERGLPISCFNVHVPDSIEGITHKLGEVIMQTKIGGGTSGYFGELRSRGSAVTDNGKSSGAVSFMKLFDSAMDVVSQGGVRRGAFAAYLDIDHPDAEEFLQIKDVEFPIQNLFFGICVPDYWMQEMIDGDVEKRRLWARVLESRQQKGLPYIIFTDNANRNRPQVYKDKDMLIRSSNLCSEIMLPSSEDESFICCLSSMNLELFDEWKDTKAVKLAVFFLDAVLSEFIEKTKGNYYLQAARNFAIRHRALGLGVLGYHSYLQRNMIPFESFEATQFNARAFRYIREEADKATKELAHIYGEPEILKGYGRRNTTTMAIAPTTSSSAILGQVSPGIEPYSSNYYKVGLSKGNFMRKNKYLTQLLEEKGLNNEEVWRSIRLNNGSVQHLQELSQLEKNVFKTFKEISPMEIISQAAQRQAYIDQTQSLNLNIPSAMPIRDVNKVLIEAWKLGVKSLYYQRSQSVAKEMMMNFVNCSSCEA
>NC_013162|2354804:2362729|2355756_2356818_+|WP_015782966.1|DBSCAN-SWA
MKKHNFSAGPSILAPEVFQKASKALLDFEGTGLSVIEISHRSPEFVRVIERARALALEIAGLDDSYTTLFLQGGASMQFLMVPYNLLETKAAYIDTGTWANKAQKEAALFGNAEVIASSKADGYKYIPKNVTVPTDIDYLHITTNNTIYGTEYHSLPQTSVPLVADMSSDIFSRPLDYKQFSLIYAGSQKNLGASGSTLVIVKKDLLGKVSRKLPSMMDYQLHIKNDSMFNTPSTFAVYVNLLVLEWIQAQGGLQALGKRNRAKADLLYGEIDRNPLVVGYANKEDRSLMNVVFNLTDESTKERFDALCKEANISGIKGHRSVGGYRASIYNALPLQSVQVLVDVLKEFERTA
>NC_013162|2354804:2362729|2358948_2359638_+|WP_009419714.1|DBSCAN-SWA
MSELITRPIPIDEEVVWDKTKTIISTTDKLGAITDVNQTFIDVCGYPAVELLGKPHSIIRHPDMPKIIFKITWDNILAGRNFHAIIKNLAKSGKYYWVITDFEVGRNIIGDVVTIMARQHSVPKYVITEHIEPLYQTLLKLEKIGDMELSNRYFKGFLEKQGKSYIEYIMDIMDESKREIHFDPIPNMPHTDTNIGDYEISDDIFSEEHHEEETMMQRKSFFAKLFSTN
>NC_013162|2354804:2362729|2362039_2362729_+|WP_015782968.1|DBSCAN-SWA
MKKKKIVVLTGAGISAESGVKTFRDADGLWEGHDIEQVATPYGFEKDPELVLNFYNGLRKQVKNVQPNPAHLLLAELEKEYDVVIITQNVDDLHERAGSHHIIHLHGELLKMRGVDDPYTLYDCTDDIKVGDLSPSGAQLRPHIVWFGEDVPMIVKAAEEVETADIVVIVGTSLQVYPAAGLMNCAKKDTPMYYIDPRPSISSKDKITVIKDVASTGVAKAIELIKELK
>NC_013162|2354804:2362729|2359715_2360024_-|WP_002672058.1|DBSCAN-SWA
MQQLMNSGLLPLILIILVFYFFMIRPQVRRQKQEKNFIEGMKRGDKVITKSGMHGRIVELTDDTCVLETLSGKIKFERSAISMELSAKLKDDKKEIQDKKES
>NC_013162|2354804:2362729|2360099_2361041_-|WP_041546835.1|DBSCAN-SWA
MLTRRHIRAKVMQSIYAMRQSQSQDLDKELKFLQNSADEMRHLYLLILSLFIELHSLATHQHKVAQKKYLATTEERTVHQKFSENLLLLAIVHNTLLQEAIADARINHWEIHEEYVRTIYKNIVESELYKKYNKQKSSFEADKSFLMTIFEEIIAPDETMYEYIEDYNLTWVDDYPIVNTYISRLFREVLPTSPDKYFVPSLYKDEEEKDFLTGLLKKAVLNDSKWEDEIITRMTGWEKDRVAVIDSILLKMAVCEMLSFPSIPVKVTLNEYLELAKEYSTTKSSAFINGVMKNVHKELEEKQQIKKIGRGLL

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009419717.1|2354804_2355770_+	D-2-hydroxyacid dehydrogenase	M1I636	Acanthocystis_turfacea_Chlorella_virus	1.3e-26	30.3
WP_015782966.1|2355756_2356818_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	4.9e-72	40.9
WP_002672050.1|2356921_2358577_-	ribonucleoside-diphosphate reductase subunit alpha	A0A223W070	Agrobacterium_phage	5.5e-163	53.9
WP_009419714.1|2358948_2359638_+	PAS domain-containing protein	A0A1B0V854	Salmonella_phage	1.0e-14	35.7
WP_002672058.1|2359715_2360024_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.1e-06	34.1
WP_041546835.1|2360099_2361041_-	transcription antitermination protein NusB	NA	NA	NA	NA
WP_002672062.1|2361239_2361518_+	HU family DNA-binding protein	Q6QIE5	Burkholderia_phage	1.7e-16	53.9
WP_041546837.1|2361623_2361863_+	hypothetical protein	NA	NA	NA	NA
WP_015782968.1|2362039_2362729_+	NAD-dependent deacylase	Q6WIA8	Vibrio_phage	1.1e-29	43.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage
NC_013162.1|WP_041546837.1|2361623_2361863_+|hypothetical-protein	2361623_2361863_+	79 aa aa	NA	NA	NA	2354804-2362729	yes

Protein sequences of NC_013162.1|WP_041546837.1|2361623_2361863_+|hypothetical-protein

>NC_013162.1|WP_041546837.1|2361623_2361863_+|hypothetical-protein
MFNLGEAYRKLIGKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQ

Self-targetings in the prophage

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361671-2361693	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361682-2361704	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361693-2361715	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361704-2361726	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361715-2361737	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361726-2361748	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361737-2361759	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361748-2361770	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361759-2361781	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361770-2361792	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361781-2361803	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361792-2361814	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361803-2361825	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361814-2361836	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361825-2361847	2
NC_013162_1	Orphan	1.1|22592|23|NC_013162|CRT	22592-22614	23	2361836-2361858	2
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361671-2361690	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361682-2361701	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361693-2361712	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361704-2361723	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361715-2361734	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361726-2361745	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361737-2361756	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361748-2361767	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361759-2361778	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361770-2361789	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361781-2361800	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361792-2361811	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361803-2361822	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361814-2361833	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361825-2361844	0
NC_013162_13	Orphan	13.2|2108563|20|NC_013162|CRISPRCasFinder	2108563-2108582	20	2361836-2361855	0

1. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361671-2361693, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

2. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361682-2361704, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

3. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361693-2361715, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

4. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361704-2361726, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

5. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361715-2361737, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

6. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361726-2361748, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

7. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361737-2361759, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

8. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361748-2361770, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

9. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361759-2361781, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

10. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361770-2361792, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

11. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361781-2361803, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

12. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361792-2361814, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

13. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361803-2361825, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

14. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361814-2361836, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

15. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361825-2361847, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

16. spacer 1.1|22592|23|NC_013162|CRT matches to NC_013162 position: 2361836-2361858, mismatch: 2

caaatgatgaacaaaagacgaac	CRISPR spacer
caaaagacgaacaaaagacgaac	Protospacer
**** **.***************

17. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361671-2361690, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

18. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361682-2361701, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

19. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361693-2361712, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

20. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361704-2361723, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

21. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361715-2361734, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

22. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361726-2361745, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

23. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361737-2361756, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

24. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361748-2361767, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

25. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361759-2361778, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

26. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361770-2361789, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

27. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361781-2361800, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

28. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361792-2361811, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

29. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361803-2361822, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

30. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361814-2361833, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

31. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361825-2361844, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************

32. spacer 13.2|2108563|20|NC_013162|CRISPRCasFinder matches to NC_013162 position: 2361836-2361855, mismatch: 0

caaaagacgaacaaaagacg	CRISPR spacer
caaaagacgaacaaaagacg	Protospacer
********************