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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP001668 Mycoplasma mycoides subsp. capri str. GM12 chromosome clone deltatypeIIIres, complete genome 7 crisprs NA 0 1 1 0

Results visualization

1. NZ_CP001668
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001668_1 140557-140640 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001668_2 229404-229494 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001668_3 258531-258627 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001668_4 298844-298990 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001668_5 586442-586622 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001668_6 676973-677076 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP001668_7 1057840-1057945 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP001668_2 2.1|229433|33|NZ_CP001668|CRISPRCasFinder 229433-229465 33 NZ_CP013682 Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence 13914-13946 8 0.758
NZ_CP001668_2 2.1|229433|33|NZ_CP001668|CRISPRCasFinder 229433-229465 33 NZ_CP013295 Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence 24630-24662 8 0.758
NZ_CP001668_2 2.1|229433|33|NZ_CP001668|CRISPRCasFinder 229433-229465 33 MN812211 Flavobacterium phage vB_FspS_laban6-1, complete genome 22169-22201 9 0.727
NZ_CP001668_2 2.1|229433|33|NZ_CP001668|CRISPRCasFinder 229433-229465 33 CP019152 Acinetobacter lwoffii strain ZS207 plasmid pZS-2, complete sequence 8788-8820 9 0.727
NZ_CP001668_2 2.1|229433|33|NZ_CP001668|CRISPRCasFinder 229433-229465 33 MN693975 Marine virus AFVG_250M1117, complete genome 8793-8825 9 0.727

1. spacer 2.1|229433|33|NZ_CP001668|CRISPRCasFinder matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 8, identity: 0.758

gttcattataattttatcataaaaatacctacg	CRISPR spacer
atctgctataatttcatcataaaaataccaacc	Protospacer
.*....********.************** ** 

2. spacer 2.1|229433|33|NZ_CP001668|CRISPRCasFinder matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 8, identity: 0.758

gttcattataattttatcataaaaatacctacg	CRISPR spacer
atctgctataatttcatcataaaaataccaacc	Protospacer
.*....********.************** ** 

3. spacer 2.1|229433|33|NZ_CP001668|CRISPRCasFinder matches to MN812211 (Flavobacterium phage vB_FspS_laban6-1, complete genome) position: , mismatch: 9, identity: 0.727

gttcattataattttatcataaaaatacctacg	CRISPR spacer
ttttattataattttataataaaaatcaacaat	Protospacer
 **.************* ********   .*  

4. spacer 2.1|229433|33|NZ_CP001668|CRISPRCasFinder matches to CP019152 (Acinetobacter lwoffii strain ZS207 plasmid pZS-2, complete sequence) position: , mismatch: 9, identity: 0.727

gttcattataattttatcataaaaatacctacg	CRISPR spacer
gagcattataattttaacataaatatatgaatt	Protospacer
*  ************* ****** ***.  *. 

5. spacer 2.1|229433|33|NZ_CP001668|CRISPRCasFinder matches to MN693975 (Marine virus AFVG_250M1117, complete genome) position: , mismatch: 9, identity: 0.727

gttcattataattttatcataaa-----aatacctacg	CRISPR spacer
tttcattataatttgatcatcaaaaagtaatat-----	Protospacer
 ************* ***** **     ****.     

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 909434 : 923478 14 Lactococcus_phage(25.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage