CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_013169	Kytococcus sedentarius DSM 20547, complete sequence	2 crisprs	csa3,cas3,DEDDh,cas4,WYL,DinG	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_013169_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013169_1

1175190-1175310

Orphan

Consensus_repeat	Method
AGCCAGGGCATGCCCAAGCCGGGCAGTGCCCGGGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013169_1

>merge|NC_013169|1|1175190-1175310|CRISPRCasFinder
AGCCAGGGCATGCCCAAGCCGGGCAGTGCCCGGGGCGCGGGCAAGCCGGGCGCGCCGCGTCCGGGCAACAACCCCTTCGCCCCGAGCCAGGGCATGCCCAAGCCGGGCAGTGCCCGGGGCG

>NC_013169|1|1|1175190-1175310|CRISPRCasFinder
AGCCAGGGCATGCCCAAGCCGGGCAGTGCCCGGGGCG	CGGGCAAGCCGGGCGCGCCGCGTCCGGGCAACAACCCCTTCGCCCCG
AGCCAGGGCATGCCCAAGCCGGGCAGTGCCCGGGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013169.1\|WP_015779134.1\|1177625_1178057_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NC_013169.1\|WP_049758360.1\|1178043_1179111_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235113
NC_013169.1\|WP_015779139.1\|1184711_1185020_+\|50S-ribosomal-protein-L21	unknown	unknown	gnl\|CDD\|235510
NC_013169.1\|WP_081439770.1\|1174071_1174512_+\|YlxR-family-protein	unknown	unknown	gnl\|CDD\|377288
NC_013169.1\|WP_015779130.1\|1172461_1172944_+\|ribosome-maturation-factor	unknown	unknown	gnl\|CDD\|234627
NC_013169.1\|WP_015779125.1\|1165939_1167730_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NC_013169.1\|WP_015779124.1\|1164330_1165872_+\|gluconokinase	unknown	unknown	gnl\|CDD\|212659
NC_013169.1\|WP_081439771.1\|1187254_1187932_+\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NC_013169.1\|WP_015779138.1\|1181597_1184477_+\|Rne/Rng-family-ribonuclease	unknown	unknown	gnl\|CDD\|273254
NC_013169.1\|WP_041290876.1\|1179098_1180055_+\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NC_013169.1\|WP_143827353.1\|1171365_1172307_-\|hypothetical-protein	unknown	unknown	unknown
NC_013169.1\|WP_015779127.1\|1168577_1169930_-\|CapA-family-protein	unknown	unknown	gnl\|CDD\|378215
NC_013169.1\|WP_015779140.1\|1185065_1185332_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NC_013169.1\|WP_015779142.1\|1187018_1187252_+\|hypothetical-protein	unknown	unknown	unknown
NC_013169.1\|WP_115306763.1\|1167784_1168534_+\|TSUP-family-transporter	unknown	unknown	gnl\|CDD\|182593
NC_013169.1\|WP_015779128.1\|1169958_1171347_-\|CapA-family-protein	unknown	unknown	gnl\|CDD\|378215
NC_013169.1\|WP_015779137.1\|1180051_1181323_+\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|274033
NC_013169.1\|WP_015779131.1\|1172996_1174070_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|237061
NC_013169.1\|WP_015779141.1\|1185488_1186991_+\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237045
NC_013169.1\|WP_015779123.1\|1163336_1164221_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379120

Protein	Function_ID	Function_description	E-value
NC_013169.1\|WP_015779130.1\|1172461_1172944_+\|ribosome-maturation-factor	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	2.25212e-29
NC_013169.1\|WP_015779139.1\|1184711_1185020_+\|50S-ribosomal-protein-L21	gnl\|CDD\|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	1.0604e-42
NC_013169.1\|WP_081439770.1\|1174071_1174512_+\|YlxR-family-protein	gnl\|CDD\|377288	pfam04296, DUF448, Protein of unknown function (DUF448).	7.81732e-17
NC_013169.1\|WP_049758360.1\|1178043_1179111_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	2.8223e-114
NC_013169.1\|WP_015779125.1\|1165939_1167730_+\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NC_013169.1\|WP_015779124.1\|1164330_1165872_+\|gluconokinase	gnl\|CDD\|212659	cd07770, FGGY_GntK, Gluconate kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is composed of a group of gluconate kinases (GntK, also known as gluconokinase; EC 2.7.1.12) encoded by the gntK gene, which catalyzes the ATP-dependent phosphorylation of D-gluconate and produce 6-phospho-D-gluconate and ADP. The presence of Mg2+ might be required for catalytic activity. The prototypical member of this subfamily is GntK from Lactobacillus acidophilus. Unlike Escherichia coli GntK, which belongs to the superfamily of P-loop containing nucleoside triphosphate hydrolases, members in this subfamily are homologous to glycerol kinase, xylulose kinase, and rhamnulokinase from Escherichia coli. They have been classified as members of the FGGY family of carbohydrate kinases, which contain two large domains separated by a deep cleft that forms the active site. This model spans both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Some uncharacterized homologous sequences are also included in this subfamily. The Lactobacillus gnt operon contains a single gntK gene. The gnt operons of some bacteria, such as Corynebacterium glutamicum, have two gntK genes. For example, the C. glutamicum gnt operon has both a gluconate kinase gntV gene (also known as gntK) and a second hypothetical gntK gene (also known as gntK2). Both gluconate kinases encoded by these genes belong to this family, however the protein encoded by C. glutamicum gntV is not included in this model as it is truncated in the C-terminal domain.	1.2109e-138
NC_013169.1\|WP_081439771.1\|1187254_1187932_+\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	6.64838e-104
NC_013169.1\|WP_015779138.1\|1181597_1184477_+\|Rne/Rng-family-ribonuclease	gnl\|CDD\|273254	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family. This model describes ribonuclease G (formerly CafA, cytoplasmic axial filament protein A), the N-terminal domain of ribonuclease E in which ribonuclease activity resides, and related proteins. In E. coli, both RNase E and RNase G have been shown to play a role in the maturation of the 5' end of 16S RNA. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome. [Transcription, Degradation of RNA].	1.8422e-176
NC_013169.1\|WP_041290876.1\|1179098_1180055_+\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.65969e-122
NC_013169.1\|WP_015779134.1\|1177625_1178057_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	3.25475e-42
NC_013169.1\|WP_015779127.1\|1168577_1169930_-\|CapA-family-protein	gnl\|CDD\|378215	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	6.26101e-73
NC_013169.1\|WP_015779140.1\|1185065_1185332_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	4.73885e-49
NC_013169.1\|WP_115306763.1\|1167784_1168534_+\|TSUP-family-transporter	gnl\|CDD\|182593	PRK10621, PRK10621, hypothetical protein; Provisional.	3.76327e-39
NC_013169.1\|WP_015779128.1\|1169958_1171347_-\|CapA-family-protein	gnl\|CDD\|378215	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	1.70039e-61
NC_013169.1\|WP_015779137.1\|1180051_1181323_+\|rod-shape-determining-protein-RodA	gnl\|CDD\|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	5.60864e-131
NC_013169.1\|WP_015779131.1\|1172996_1174070_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	1.0339e-175
NC_013169.1\|WP_015779141.1\|1185488_1186991_+\|GTPase-ObgE	gnl\|CDD\|237045	PRK12296, obgE, GTPase CgtA; Reviewed.	0
NC_013169.1\|WP_015779123.1\|1163336_1164221_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379120	pfam13312, DUF4081, Domain of unknown function (DUF4081). This domain is often found N-terminal to the GNAT acetyltransferase domain, pfam00583 and FR47, pfam08445.	3.22994e-35

>NC_013169.1|WP_081439770.1|1174071_1174512_+|YlxR-family-protein
MGGPAGPPAAPEPPGPAVGTRAQRPVRTCIGCRGKAPSDALVRLVALPPTSAQAEVHGVRGDHEDRTPGRSGTRVVLDPVRRLPGRGAHLHPDGACVERAVQRRAIPRALRLPGNVDLSEVIKWADRLTARTDRREELDMEAGHTR
>NC_013169.1|WP_015779131.1|1172996_1174070_+|transcription-termination/antitermination-protein-NusA
MKIDMAVLREVEREREIPLDVLVPALETALLQAYQHEAGGRRNARVELDRRSGQVVVWAREDAPVLEDGTRGEAGPEFDDTPEDFGRIGAFTVRQVIRQRLRDLEDEAVLGDFKGKEGDIVAGVIQQSNDPHAIHVDLGTVEGLLGTSEQVPLEDYKHGDRIRCYVIHAKRGMKGPLIGLSRTHPNLVRKLFALEVPEVADGTVRIESIAREAGHRSKMAVRATQPGVNAKGSCIGPMGGRVRAVMNELQGEKIDIVDYDDDPRKFVAAALSPAKVTSVTVVDEKTRSARVTVPAHQLSLAIGKEGQNARLAARLTGWRIDIQPDHTADEAGSIGAVSADPSGAVARPGSAPDGSQG
>NC_013169.1|WP_015779130.1|1172461_1172944_+|ribosome-maturation-factor
MTLQERTERVWELSSAAVAPLGLEVPDVVITPAGKRSVVRVLVEPALPVDDAGDTVLEPITLDQVAEATELVSTGIDADDPFGEQPYTLEVSSPGVDRPLTSLEHFRRAVGRRVEFRPLEGEPFTERITRVAEEQIVLEDGRALSLAEAGTGQVQVEFRR
>NC_013169.1|WP_143827353.1|1171365_1172307_-|hypothetical-protein
MMSLRPRRDPRPHHDSPTDGEGISRRAWARAAVLGVALPAGLSGCGVHLESDEHPPREDEDPRTALRLVQSGARYAMRTSLAHGSRTRWVTEGLQEQVLHLRGITGAVTIDPEKVLQPRVNGDVARALLASADAMLPRLHEAGDDLGLASDMVAWWIGASHVIDPRGALPSVPNDAAAQAATTIEGLHEVTWAMQVLTTRLAADARKRSLRNIGHLQDIRRVVDNLAGTAGPEQEVAYQMPREVMDRENRADRFMHFLDAWSAELRGQIRENAGDAKHVHLLTSLLGTATGLQMDWNEHTTPAVPATDDSAGD
>NC_013169.1|WP_015779128.1|1169958_1171347_-|CapA-family-protein
MHRHTAHQRTGRAAAALVASTLVLTACSGQESAEDPSSGTSAAESPASSSGADESGAAPESATSAESESAGSEPPGSGSSESPESESEGSTSESPESESPSPDATSGPASEDPGGAPAESFTVVTTGDMLTHFVLQERADALEPGPGFAFGGMLAEVAPLIGGADLAICGQETPLSADNTDLTASAGTFEFNAPRELATAMAEAGYDACNTASNHTWDKGLQGVKQTRAVLQDNGIEPVGPVPPGDGGPGHPVLLDAGDAQLGVLTYSYNTLNSLGVKSHPDLPWMDPHLYRGRQASGIIEDARAAREAGADVVMVGMHWGAEYQQQPTPEMREIARDVLASGAVDAIAGAHAHVVQPCETIDGRTVAYGMGNFLSEQGPNRYPATPAATQDGVLLRWTFTPQHDDGEASWSQELEYQPTFVTRPDFVIQPTSASVNPRSFQRTVQAMTALGDGACDATLLQ
>NC_013169.1|WP_015779127.1|1168577_1169930_-|CapA-family-protein
MHTSVTTRTLALAALGSLTLAACSGESGSDPSSPDTPGSPSESSPADEPSGSGEAEPSESDSNSPSGSTSASDEASPSGGAEPSGDSSPSPSGSSEAAAAGTSFTVVATGDVLVHRDIITQARANGSGGGYDFSPMFAPVKPWLAGGDVTICNQETPLSPDNTGLTNSNKIAVFNTPHEQADALAEAGIDACSTANNHTLDQGIDGITATRALMDEAGVVPIGPAEAPTGGQQGDGSDNPVLLEAGDQTVGVLTYSYNVANAGLSEELSSHPWMEKHMWFAQKKAGIEAQAKQAREQGADVVVAVVHWGAEYSIPPRPEQEQLANQLLKGDQVDAIFGHHAHLPQPCATINDKTVFYGLGNFLSAQRKKPTNNFPPQVQDGMIAGITFTADGEGGWTQQASYQPTIVTQPKFVIEPVSPTEHPESFQRTSSTVEKLGAASCNAEIMQPQG
>NC_013169.1|WP_115306763.1|1167784_1168534_+|TSUP-family-transporter
MFAAGLLAGWIDAVVGGGGLVQLPALMLGFPQAAPVQVLATNKIAAIAGTSVSAVTYYRRVRPDLRTAIPLAVLAFAGSFFGARVAAAIPQEAFTPIIMGALVLVGAYTLLKKDLGREARMRFDGREHLAVAGLAGAAIGFYDGALGPGTGSFLVFALVGLLGYDFLAASAKAKIANVATNLAALVVFVPMGAVVWEVGAVMALGNVIGGYLGARTAVARGGGFVRVVFIVVVGTFLLRLGWDLLTPVA
>NC_013169.1|WP_015779125.1|1165939_1167730_+|proline--tRNA-ligase
MAMRMSTLFLRTLREDPTDAELPGHRLLVRAGYVRRVAPGIYTWLPLGLKVMEKVKGIVREEMEAIGDQEIAFPSLLPREPYEASNRWTEYGDDLFRLTDRKGADMLLGPTHEEMFTLAVKDLYTSYKDLPLGLFQILPKYRDELRPRAGVLRGREFTMKDAYSFDVDEAGLEAAYQRHRKAYTRVFDRLGFEYVAVHADSGAMGGSASEEFLAVMDSGEDTFVRDESGYAANVEAVQMPVVPVPTDEAERTALWGHLPAAHVEDTPDTPTIETLVAAANADHPRADGREWTAADTLKNVLVVLVHPDGTREPLAIGVPGDREVDAKRLEAQVSPAVVEPFETADFEQYPDLAKGYIGPGVLGAERATGIRYLLDPLVTPGSAWVTGADEAGKHVFDLVHGRDFTADGTIHAASIREGDPSPTGAGPLRLARGVEMGHIFQLGTKYAEALGLKVLDQNGKLVTVQMGSYGIGITRAVGVVAETHHDEIGLVWPRELSPADVHVVATGKDAAVLEKAEELTAALEQQGLTVLLDDRPKVSPGVKFKDAELIGVPTILVVGKGLAEGEVEIKDRAAGSSRAVAVDAAVEAVVAEVRGQ
>NC_013169.1|WP_015779124.1|1164330_1165872_+|gluconokinase
MAQHQAPPHQVVIGIDVGTTAAKVTAFGVGTPFRTTVEREYPLLRPRPGWAVQEVPTVLAAVAAALAECVHRVAGSHVACLSVSTAMHGLVGLDDELRPLTPLATWADGRAAEQSARLATQGVARELHERSGTPVHPFAPLSKLLWFAQEEPELFGRVRAWAGLKDVVLHHLTGTLVTELSSASGTGLLDLRTRQWSPDTLELVRVRQDQLPEVLDTTAALGLTRRVAERLGLPVATPVVVGAGDGPLGNLGTGALEPGVAGLSTGTSAALRQIVPEPRIDPEGRLFCYALTRDAWAVGGALTTGGSVVRWAGDVFGRDLMGSPGETVDADLLALARSVPPGSEGLAMVPWLGAERAPLWDPTVRGAFVGLRASHTRGHFVRAAVEGVALQVEAVLRQVESIHPVHEIRATGGVFRSDLWRDVLSAVLNRPLVVAAGAEGSGLGAAALGAWATGLADDLPGALQLLADEDTLTGDEEVIRPDPERVAQYDRLTDSVADTLETLGRAAEVLRSS
>NC_013169.1|WP_015779123.1|1163336_1164221_+|GNAT-family-N-acetyltransferase
MTALGPQHTDEVLSLCAQDPAARVFVASRIEEGVLNARGQVLGWVAGGRLQAMVLCGANVVPVGLDERSAAALADHVGSRRALSSSLFGEVAAVRLLWEQLRPLWGPARDERWEQWSMVTSTRPAELGVRADPRVRPARLEELDLVHPAGAAMFTEEIGYPPYQGSPARYRAGFEQLISQGRTFVVVEDGRVVFKADVGSVAFGVAQVQGVWTHPSQRGRGLATGAMAGVVDQLLTDGLPAVWRPGRVPPGPVGSPRERIGTVHLYVNDYNHAARAVYERVGMRRVGTFATIIL
>NC_013169.1|WP_015779134.1|1177625_1178057_+|30S-ribosome-binding-factor-RbfA
MADPARARKIADRIRDLLAENLAAVVKDPDLGMVTITDTRVTPDLQQATVFWTVLGDEDQREKSAELLQRHRGKLRTLIGKGLGIRLTPSLEFVHDALPEDAAHLEDVLRRAKEEDERRAAENAGAQYAAGEDPYKKPADEEQ
>NC_013169.1|WP_049758360.1|1178043_1179111_+|tRNA-pseudouridine(55)-synthase-TruB
MRSSEAPVSRPAPAPDGLLVLDKPSGPTSHDIVSRCRWLCATRKVGHAGTLDPLATGVLLVGVGRATRLLTHLVGADKTYRATVRLGEGTTTEDAQGKFTQTTGVPDRDALLADPQPLRDACNALSGELMQVPSTVSALKVGGKRAHARVRDGEEFELEARPVTVHAFELLDVQPAQGASGTEVLDLDVRVRVSSGTYVRALARDLGGSLGTAAHLTALRRQAVGGFTLASATPVDELVEAREGGALPASMPVLPMGEVARRVLPVAQLDEELTGRVRNGQQVTLPEPPAWARVDAAGRVLSGPRPPLSADGRAALLGPDGDLVAVVEPSGQRWKPVTVFPPATPPARRLPPCSD
>NC_013169.1|WP_041290876.1|1179098_1180055_+|bifunctional-riboflavin-kinase/FAD-synthetase
MLRLTHPDQVPEDVRRRGSAVTIGTFDGMHRGHRAVLARLVDEARSHDLASIVLTFHPHPLEVLHPERAPEAICSLEQRLEHLERAGVDVVVAQAFTHELAAQSPREFVTETYVRNFGMRRIVVGRDSRFGRHNAGTVDTLRELGEELGFDVVVLEDVGDPATTRWSSTAVRTALGQGRIDAASEHLGRPHCVRGTVVHGERRGRELGFPTANLSADAEGMVPADGVYAGWLVRDTLPEGDPERRQPAAISVGSNPTFDAHRRTVEAHVLDRTDLDLYGEPVTIEFVERLRGMVRYEGIEPLIEQMRADVSAAREVLS
>NC_013169.1|WP_015779137.1|1180051_1181323_+|rod-shape-determining-protein-RodA
MSGAFPELSPSTRPERSRTTVRDAPSDELTPASVPHRYAAPLGAARPVDLPREKPAVERILQHTDWPLVGVSLALSLLGALAVYSTTHMDTGAATAVRHLLNMGLGLVFFALISRLDVYRLRSLTPWLVVLGWAGLVLVLLIGKEIYGAKSWIVIGGGFTIQPTEFMKVALCLGLAWALSDRLRPKVAQPGHLQVVLAWALVFLTLALVMLQPDLGSGLVIGVLGFGVVALSGASRWWVLAAVVGAVSAATLAITTGLLKPHQMDRLTTFLNPEADPSGDGYQVIQSKVAVGSGGLFGQGYLQGRQAQGGFLPVDESDFIFAVVAEELGLLGGGLLVLLLAFVVLRALRIAQQTTDVFPRLVAVGIACWFGFQAFENIGMTMGVMPMTGVPLPFVSYGGSSMFASWIAIGLLNAMAIAVREDS
>NC_013169.1|WP_015779138.1|1181597_1184477_+|Rne/Rng-family-ribonuclease
MDADQTQQPGSFALLFQAPDPEAMRATRQRGSEQEVDDEQERPTRRSRRDAQDAGRPEGRRQQGRGNARRGRSGEDQDAAVEQDRDDSEAGRDSGDSDESTGGRQRPQRRTRARGERGSSRGQRGDEGRDGGDDDPTSSGRGGSARGEDSGRDDRDDQDQQDDRGPQGGHEDDDSEESGGRRSRRRRGGRGRGQSDEGAEGGQGRGGRPSERSQDDDEDGSGDGSGVSGDDDSEQGRGSRRARKRSRGGRNRSRGQSGRSEDQGGGSDAVDEVTGVQGSTRLAAKKQRRREGREAGRRRTVLTEAEFLARRESVHRTMVVRESAEYTQVGVLEDGVLVEHYIDRQQQTTMVGNVYLGRVQNVLPSMEAAFVDIGKGRNGVLYAGEVNWDAAGLPKGEQKRIESALQPGQPVLVQVTKDPIGHKGARLTGQISLPGRYLVYVPGNTTTGISRKLPDTERARLKKILKDVVPADAGVIVRTAAEGAAEAELRADVERLTTQWERIAAAQAKGSAPTLVHGEPDLTVRVIRDVFNEDFTKLVVSGPTAWESVTSYIDAVAPDLTPKLERWEGEQDVFEHHRIEEQIAKAMDRKVWLPSGGSLIFDRTEAMTVVDVNTGKFVGSGGNLEETVTKNNIEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVVRRLVECLARDRTKHQVAEVTSLGLVQMTRKRVGSGLVEVYGETCEHCDGHGLVVQDAPVAVRGGGSGGGRRSGRQSGKEGRQQGEAQAAPRSSGPSVAQIARAVHAAALKGDEEGLPEEQAAGGTDESAPQAPAAAAEGATDDAAEGVAEQAPREQTRAEQPATAPKAAAETASPAQATSGDAPAVTGRIGRRSAAPVESAPQVGDEESSSYVGAPVADAPEPAPAPARRSSRRRAASTGAAAPSVTVAPQPAPTTSVAGGAGVAEKSTITRRTPRRRVVAPQGDGASPA
>NC_013169.1|WP_015779139.1|1184711_1185020_+|50S-ribosomal-protein-L21
MYAIVRAGGRQEKVSVGDVLTVDKVAGEAGESIDLQPLLLVDGSTVTAASDKLAAASVTAEILGATKGPKITIQHYKNKTGYKRRQGHRQPLTEVKITAINA
>NC_013169.1|WP_015779140.1|1185065_1185332_+|50S-ribosomal-protein-L27
MASKKGVSSSRNGRDSNAQRLGVKRFGGQVVKAGEIIVRQRGTHFHPGENVGRGKDDTLFALEAGAVEFGSKRGRKTVSIVGADAAAV
>NC_013169.1|WP_015779141.1|1185488_1186991_+|GTPase-ObgE
MTTFVDRVVLHLAAGKGGHGVASVHREKFKPLGGPDGGNGGHGGDVLLEVDDQVTTLLEYHRGPHRSAPNGQPGEGDERNGAAGEHLVLRVPDGTVVKDRAGEVLADLVGHGTQFVAARGGRGGLGNKALASRRRKAPGFALLGEPGEERELVLELKTLADVALIGFPSAGKSSLVSVLSSARPKIAEYPFTTLVPNLGVVTAGDDRFTVADVPGLIPGAAQGKGLGLEFLRHVERCGVLVHVVDCATLEPGRDPLTDLDVIEAELRQYVPDQALGGRPLSERTRVVVLNKADVPEARELAEMVEPMLVERGVEVHIVSAVAHQGLEPLKFSLARHVAKHRASLPPAEPARVVVRPKAKDDAGFTVARENSHDGPYFRVVGERVERWTHQTDFANDEAVGYLADRLQRAGVEEQLVAAGAVAGDTVVIGAGDGVVFDWEPTITAGAEHLGSRGSDLRLEERARPTRTEKREAFHARKDAESEVRREMEAERRAGVWTADD
>NC_013169.1|WP_015779142.1|1187018_1187252_+|hypothetical-protein
MHNVLTVIAQGAEGAHHGPELPFAPIWFGVIALGILMALLAILWQFRHAVPMNPADEEFAADHVRHRQNRRTSAGRR
>NC_013169.1|WP_081439771.1|1187254_1187932_+|nicotinate-nucleotide-adenylyltransferase
MRLGVMGGTFDPIHHGHLVAASEVAATFGLDQVLFVPTGHPWQKEGKQVSPAEDRYLMTVVATASNPRFSVSRVDIDRPGPTYTRDTLRDLSERYPDAELFFITGADALGQILSWKGVEELWELAHFIGVSRPGHELSATGLPQDKVTLTEIPAMAISSTDCRERVADGLPVWYLVPDGVVQYINKHGLYTAQATESDEGFSAILPPATAPSRPDTPDPVQEDTA

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Crispr_ID: NC_013169_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013169_2

1683082-1683177

Orphan

Consensus_repeat	Method
GCCGAGGGCAAGGACTCCGCAAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013169_2

>merge|NC_013169|2|1683082-1683177|CRISPRCasFinder
GCCGAGGGCAAGGACTCCGCAAAGGCCGAGGAGCCCGCCGCCGAGGAGAAGCCCGCTGCGGAGAAGGCGTCCGCCGAGGGCAAGGACTCCGCGAAG

>NC_013169|2|2|1683082-1683177|CRISPRCasFinder
GCCGAGGGCAAGGACTCCGCAAAG	GCCGAGGAGCCCGCCGCCGAGGAGAAGCCCGCTGCGGAGAAGGCGTCC
GCCGAGGGCAAGGACTCCGCGAAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013169.1\|WP_015779590.1\|1676240_1677194_+\|hypothetical-protein	unknown	unknown	unknown
NC_013169.1\|WP_015779601.1\|1688971_1690396_+\|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|273198
NC_013169.1\|WP_015779591.1\|1677257_1678376_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NC_013169.1\|WP_015779593.1\|1680148_1680325_-\|DUF5302-domain-containing-protein	unknown	unknown	gnl\|CDD\|379949
NC_013169.1\|WP_015779600.1\|1688299_1688776_-\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NC_013169.1\|WP_015779597.1\|1685505_1686210_+\|lipoyl(octanoyl)-transferase-LipB	unknown	unknown	gnl\|CDD\|184638
NC_013169.1\|WP_015779586.1\|1672847_1673543_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NC_013169.1\|WP_015779596.1\|1684113_1685439_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NC_013169.1\|WP_015779587.1\|1673547_1673907_-\|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl\|CDD\|223393
NC_013169.1\|WP_015779604.1\|1694033_1694345_+\|cupin	unknown	unknown	gnl\|CDD\|380355
NC_013169.1\|WP_015779599.1\|1687392_1688166_+\|DUF4191-domain-containing-protein	unknown	unknown	gnl\|CDD\|379389
NC_013169.1\|WP_015779585.1\|1671857_1672772_-\|cytochrome-c-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224537
NC_013169.1\|WP_015779602.1\|1690526_1691813_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275147
NC_013169.1\|WP_015779592.1\|1678484_1680059_+\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NC_013169.1\|WP_015779588.1\|1674022_1675393_-\|dipeptidase	unknown	unknown	gnl\|CDD\|236127
NC_013169.1\|WP_015779598.1\|1686322_1687345_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
NC_013169.1\|WP_015779589.1\|1675465_1676086_-\|DUF3043-domain-containing-protein	unknown	unknown	gnl\|CDD\|378611
NC_013169.1\|WP_015779594.1\|1680555_1681932_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235798
NC_013169.1\|WP_015779605.1\|1694436_1697988_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NC_013169.1\|WP_015779603.1\|1691809_1693990_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224684

Protein	Function_ID	Function_description	E-value
NC_013169.1\|WP_015779598.1\|1686322_1687345_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
NC_013169.1\|WP_015779601.1\|1688971_1690396_+\|type-I-glutamate--ammonia-ligase	gnl\|CDD\|273198	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family].	0
NC_013169.1\|WP_015779591.1\|1677257_1678376_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NC_013169.1\|WP_015779593.1\|1680148_1680325_-\|DUF5302-domain-containing-protein	gnl\|CDD\|379949	pfam17227, DUF5302, Family of unknown function (DUF5302). Family of unknown function found in Actinobacteria with highly conserved motif of FRRKSG found at the C-terminus.	1.16941e-09
NC_013169.1\|WP_015779600.1\|1688299_1688776_-\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	8.13485e-11
NC_013169.1\|WP_015779597.1\|1685505_1686210_+\|lipoyl(octanoyl)-transferase-LipB	gnl\|CDD\|184638	PRK14345, PRK14345, lipoyl(octanoyl) transferase LipB.	7.1038e-107
NC_013169.1\|WP_015779586.1\|1672847_1673543_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	3.9666e-94
NC_013169.1\|WP_015779596.1\|1684113_1685439_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	5.60342e-06
NC_013169.1\|WP_015779587.1\|1673547_1673907_-\|iron-sulfur-cluster-assembly-accessory-protein	gnl\|CDD\|223393	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones].	5.77609e-48
NC_013169.1\|WP_015779604.1\|1694033_1694345_+\|cupin	gnl\|CDD\|380355	cd02226, cupin_YdbB-like, Bacillus subtilis YdbB and related proteins, cupin domain. This family includes bacterial proteins homologous to YdbB, a Bacillus subtilis protein of unknown function. It also includes protein Nmb1881 From Neisseria meningitidis, also of unknown function. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	8.4136e-07
NC_013169.1\|WP_015779585.1\|1671857_1672772_-\|cytochrome-c-oxidase-subunit-II	gnl\|CDD\|224537	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].	1.57271e-54
NC_013169.1\|WP_015779602.1\|1690526_1691813_-\|hypothetical-protein	gnl\|CDD\|275147	TIGR04352, hypothetical_protein_imdm_1353, HprK-related kinase A. A number of protein families resemble HPr kinase (see TIGR00679) but do not belong to that system. They include this family, which appears instead to be the marker for a different type of gene neighborhood, in which one of the conserved neighboring proteins resembles (but is distinct from) PqqD.	2.59643e-08
NC_013169.1\|WP_015779592.1\|1678484_1680059_+\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	7.1143e-177
NC_013169.1\|WP_015779588.1\|1674022_1675393_-\|dipeptidase	gnl\|CDD\|236127	PRK07907, PRK07907, hypothetical protein; Provisional.	0
NC_013169.1\|WP_015779599.1\|1687392_1688166_+\|DUF4191-domain-containing-protein	gnl\|CDD\|379389	pfam13829, DUF4191, Domain of unknown function (DUF4191).	3.10206e-76
NC_013169.1\|WP_015779589.1\|1675465_1676086_-\|DUF3043-domain-containing-protein	gnl\|CDD\|378611	pfam11241, DUF3043, Protein of unknown function (DUF3043). Some members in this family of proteins with unknown function are annotated as membrane proteins. This cannot be confirmed.	2.20187e-53
NC_013169.1\|WP_015779594.1\|1680555_1681932_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235798	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.	0
NC_013169.1\|WP_015779605.1\|1694436_1697988_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NC_013169.1\|WP_015779603.1\|1691809_1693990_-\|S9-family-peptidase	gnl\|CDD\|224684	COG1770, PtrB, Protease II [Amino acid transport and metabolism].	0

>NC_013169.1|WP_015779594.1|1680555_1681932_+|dihydrolipoyl-dehydrogenase
MPSSTPTHDLVILGGGSGGYAAALRAAELGLTVALVEKGKLGGTCLHSGCVPTKALLHAAEVADSTRESDTFGVNATFEGIDMGRVNSYKEGIIGRLHKGLQGLVKSRKVEYVEGEGRLTAPNTVTVGDRELVGKDVVLATGSRPKLIPGLEVGGRVMTSEQALQLDTVPESVVVLGGGVIGVEFASVYTSFGAKVTVVEGLDRIVPAEDEAVSKTLNRAFRKRKIDVRTGVRFQSVDNREDGVTVTLEDGTELEADMLLVAIGRGPVTEDMGFEEAGVTLDRGFVTVDEKLRTSVDHVWAVGDIVPGLQLAHRGFAQGIFVAETIAGLDPTPIDESGIPRVTYCDPEIASVGLTEAAAKEKYGEVESVEYNLGGNGKSQILGTQGFVKLVRRTDGPVVGIHMVGARIGEQVGEAQLIYNWEAMPEEVAALIHAHPTQNEALGEAHLALAGKPLHAHN
>NC_013169.1|WP_015779593.1|1680148_1680325_-|DUF5302-domain-containing-protein
MTNEHVTDETKRKFEEALKAKKSHGGTDVSAEGRHGKVDNSHGAETSGAQQMFRRKSV
>NC_013169.1|WP_015779592.1|1678484_1680059_+|leucyl-aminopeptidase
MTSLPFELSAYDLELTVASGTAAEADTDALVLGAWAVGGKAQLADAGLPSEATESITKALTTLKATGKIDSTTVLAGAAGTSAGLVVVAGLGSADAEELTADRLRRAAGAGVHASGGATSITFALPAADAEGAVAVAEGAALGAYADTRYKSKVTETDEVEADAPEVRRIAVVAPEGAGELEAGFARAAVLGRQMRYARDLVNTPANHLYPESFVASVQAAAPAGIEVEVMDDTQLREMGAGALYGVGMGSERKPRIAVLRYRPQNATQHVAVVGKGITFDTGGISLKPGASMFTMKMDMGGAAAVAGAVFAAAELGVEANITGILCLAENMPSHNAQRPGDVVTALNGLTVEVLNTDAEGRLAMCDGLVLATRENPDLIMDIATLTGAAVMALGDRTIAVMGNDDAVRDAVVGTSARTGEPMVGFPIPEEVREGVTSSVADLRNIIPGKPAGMQAAAAYLERFVGAQGGADHVTGDAEQIPWAHLDIAGPAFNEGSPWGYTPTGGTGSGVRTLLAVFEDVPVA
>NC_013169.1|WP_015779591.1|1677257_1678376_-|glycine-cleavage-system-aminomethyltransferase-GcvT
MTDNSLKKSPLHDAHVARNAKMADFGGWDMPIEFPGGGVKAEHTATREAVGLFDVSHMGKVRVSGPRAADFVNSCFTNDLKRIEPGKAQYTMCCAPDGGVIDDLIQYLRSDEDVLLVPNASNATEVAELLTAEAADRAPGVTVSDEHTQHGIIAVQGPKADEVMAELGLPTHHPDFMSFLDAQWESHEVVVCRSGYTGEKGYEIICPWDATPALWEALVAAAEERGGLPAGLGARDTLRTEMGYPLHGHELSREISPVMARNAWAVGWDKESFWGSEALAEQRAAKSGRLNRGLKVTGRGIPREGNEIKDSEGTVIGVVTSGTFSPTLGHGIGIALVDRSHTFGDQVVIDVRGREVPAELVKPPFVEAGVRA
>NC_013169.1|WP_015779590.1|1676240_1677194_+|hypothetical-protein
MAATVALVGPVALAGPAAADTGTRYWSSWTAGWEGWEVPEDGPRTAVPEDGSTVGVRYSLVPRDTGEGRQPRALPDFDSSCRDATWYEGVKRVAVVVDYGRGEEAPVARPDHLPQVETTCATVPVDFTTEQTLQSVLDVEDSGQGICAVNGHPSEGCSANLVADADSAVLTASEEPVEAVVLSPEEASHTPEVPEPASPTLPEGEEDEPGGPQTDDGSSDGGSSDETSAPEEGGVPSPTDSEDGAIADDADPGAPEEAAAVQPAGGLVPWYATLLALALLGAGLWLLLRPLPSTPGRAGGLRSTVSRRLQERRRRRR
>NC_013169.1|WP_015779589.1|1675465_1676086_-|DUF3043-domain-containing-protein
MARRLTEQTIEDLPEQEVDTRPAGQQKKGRPTPKRREAEAARRKPLVVADRKAAKQADREERARQRAIVRQGTLAGDDRYLAPRDRGPVRAYVRDRVDGRFSVGQVMLPVLLTVLVATVVMMYLPEQSSWVRIGVFVAVYGMLLWGLVDGWMLARRLKGEIGRVFPQRAGETKGLTSYVILRSFQMRGSRTPRAAVERGETPRALR
>NC_013169.1|WP_015779588.1|1674022_1675393_-|dipeptidase
MSQNDQSSASSSRPTAAELRAAVRAGMPRVVDELIELARIPSVSMPSFDQAHVQASAAATARLLQDAGLAVEIVTEGGAPAVIGSLPAPEGAPTVLLYAHHDVQPPGDDADWDTPPFEPTRRGDRLFGRGCADDKAGIMAHVAALRAHGGRPPVGVTVFVEGEEEYGSESLPAILGKHGHKLECDAIVLADSANWKVGVPALTTSLRGMVRVQVTVSTLSHAVHSGMYGGPALDSLTAFSRLAATLHDEQGDVAVDGLVSDAVGDLPMVEADFRAESGMLPDSHLIGTGSLTERLWGKPTASVIGVDAPKVSEASNTLLASTTGLFSFRLAPSQDPQEAYAAIEQHLRANAPWGATVEVSLQDAGSGFSADATGPAYDAARTAFGAAWGTDAVDIGLGGSIPFIAMFAEKFPQASILVTGVEDPDTRAHGANESLHLGEFEKVCVAEALLLDVLAG
>NC_013169.1|WP_015779587.1|1673547_1673907_-|iron-sulfur-cluster-assembly-accessory-protein
MTVQDTTTSEATHGVTLTPVAAEKVKSLLDQEGRDDLRLRIGVQPGGCSGLIYQLYFDERTLDGDATRDFGGVEVVVDRMSAPYLEGAAIDFADTIEKQGFTIDNPNAGSSCACGDSFS
>NC_013169.1|WP_015779586.1|1672847_1673543_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRFRCGLDFESAVAAADPQEDLLGAGGDLAPGTLLSAYSHGVFPMGLGPGGRGPLGWWFPVERGVLLPGEIHVSRSLRRSLRTFTLTVDRAFGAVTEACADPDREGAWITPEVRRAYGDLHRMGWAHSIEVWRQHELVGGLYGVGIGGFFAGESMFHHVTDASKAAMVGMARVMAQAGQDALVDVQWRTDHLASMGVRTVDRQEYLRRLEVATEGVDPWRRASRDVVSDVG
>NC_013169.1|WP_015779585.1|1671857_1672772_-|cytochrome-c-oxidase-subunit-II
MHRHPENTRRWQRPAVLAGAATLGALVLSACGSSDQIARGYLPEGVTENSDGVTTFWVGMWIAALAVGVLVWGLTAWCIVAYRRKDDSELPKQVRYNMPIEILYTVVPIVMVAGLFVQNVKLENDLMDLNEEPENIVHVAGKQWSWDFNYLSDDVHESGQQAVLTGEEGVAEGLPTLYLPVNERTEFVLTARDVIHSFWVPQFLQKLDMIPGVVNRFQVTPTEVGTYQGKCAELCGAYHSEMLFQVKVVERDEYDKQMQALEDAGKSGFLDTGYDRKELVHGENDVEDRDVNHNDWMLKGGKDD
>NC_013169.1|WP_015779596.1|1684113_1685439_-|hypothetical-protein
MARLDELLQDGWRPQPREVVRLLRDVGSELTRLHRGGAVHGGISPASVERTADGGFRLCPADAAGRDPWLVEPPEVVDGDAPTVQSDAYEFAATTEQVVRSVEWEVPGAVVVAVQRSLRENPGARPSVTAFVVCATEELVEHQDEDEDEDEHAHEGKGKHEHVEEGGVATGEVIEGEGPEAGPEPPTDPLPVVDGPGDREGQDVAGDQDAQRIAALRESLRAAAAEPPRRGLQGAGRRRGRLLAVGAAALLLTGSLWWAGRPAPAPAPEPVAAQVPAAEGSVAAGEQAIPSAAESSSPPSTSPPPSPGATEDGQGPSQAAGPMPAAEDVEALLDARAAAWAEGDEEALAEAVVPGSPAWERDSATGPGGGEVELPSYRVSDLQAVPGKGTSGLVLTASVAQGSDGDPVPVRLVLEAADGAGAGRLVDWTVLSAAEDAPTDG
>NC_013169.1|WP_015779597.1|1685505_1686210_+|lipoyl(octanoyl)-transferase-LipB
MRCEHLGLVPDTVDYMEGWELQKQVHQQVADGGEDTVLLLEHTAVYTAGKRTEPHERPLDGTPVVDVDRGGKITWHGPGQLTGYPIVRLADPVDVVAHVRRLEDVLIRTVAEYGIEATRVEGRSGAWVLGDPGSPDPAVRQDRKIGAIGIRVSRDVTMHGFALNVDCTLGWADGIVPCGIADAGVTTLAIELERAGRAPVTVRDVLPAVERHLHEVLGAVEVARTATPAEAATA
>NC_013169.1|WP_015779598.1|1686322_1687345_+|lipoyl-synthase
MTIAPEGRRLLRVEARNAETPIERKPEWIRTTAKMGPEYREVNSMVKGQGLHTVCQEAGCPNIFECWEDREATFLIGGDTCTRRCDFCDIATGKPQALDPMEPLKVANSVAQMGLRYATVTGVARDDMPDGAATLYADTIRAIHERNPNTGVEILPPDFGAKPELVQKVFDARPEVFAHNLETVPRIFRQIRPAFTYEKSLKVISMAKEDGLLTKSNLILGMGEDDEEIRQAMRDLRDAGCDILTITQYLRPSKLHHPIDRWVKPEEFVAHSEYGESLGMSIMAGPLVRSSYRAGRLWAQTMKKLGREIPEHLSHLGEAADDGARQEARTLVEKRLSASA
>NC_013169.1|WP_015779599.1|1687392_1688166_+|DUF4191-domain-containing-protein
MAKNKTTPAGKKAKADKPKLTSRMKKTLSQIGEVYRMTARANPNTPWLMLAVFLGVMVLFGVLGLLFDLFVYFMVLGLPIALVAVTFTLGRLAQKAAYTQVEGQPGQGGAVLQALGRSWWYEQEPVAAEMPRRARSMQDMSAAAMVFRGVSRRGVLLVAEGPKNAAQRMLTAQEKHVHRIVGPEVPVATYLVGSGDDRTPMSQVIREVKKLPKQITTAEAEAVHRRLTAMGGLKQQAGLPKGIDPQRMRTAKRSTMR
>NC_013169.1|WP_015779600.1|1688299_1688776_-|RDD-family-protein
MDRREIGSWLSGPRAALPEDQRPPDQDHPGQRLGLPAQGPGSIAPLMRRLVALFIDWFACLAITAATWGDLQAGGTGQLVTLGIFVLENIVLVATLGSTLGHKVMGLQVIRLDDRPVTLFDAISRSLLIGLAIPALIWDRDLRAMHDWPRRTAIVRGR
>NC_013169.1|WP_015779601.1|1688971_1690396_+|type-I-glutamate--ammonia-ligase
MFTSPQEVIDYIRDEEVEFLDIRFCDLPGVMQHFNVPASTVDAEALATGQMFDGSSIRGFQAIHESDMKLLPDVATAYIDPFRDAKTLVMNYSIVDPFTDEPYGRDPRTIAKRAEEYLKTTGIADTVFIGAEAEFHVLDDVRFETKPGSAFYAVDAEAAAWNTGEEELGGNQGYKVGTKGGYFPVFPTDHYTDLRDRICKNLDAVGLEVERSHHEVGSAGQQEINYKFNTLLHAGDDMMKFKYVVKGTAWEDGRSATFMPKPVMGDNGSGMHTHQSLWKDGEPLFHDENGYAQLSDTARWYIGGLLKHAPALLAFTNPTINSFRRLVPGYEAPVNLVYSARNRSACIRIPITGSSPKAKRVEFRVPDPSSNPYLCFAAQLMAGIDGIRNRIEPPEPVDKDLYELPPEEQDAIAQLPFSLDDALLALEADHDFLTEGDVFTEDLIAAWVDYKRTHEIEPMRLRPNPYEYELYFHI
>NC_013169.1|WP_015779602.1|1690526_1691813_-|hypothetical-protein
MTTTGAAPRAGQDGEEGREIARLQVLSTVWSVVDHASGMQDDIPALWARCATEAAPTRVVRLLPAGETAPRSVDAAGVADAADARATHPATGEPARLPEQILTVTDEQSGYRFASRVISSSIAEHVGKALMLHAGALTVAGGDRAVALVAASGTGKTTASRVLAQQGWGYLTDECVAVGEDLTIQPLAKPLSVVTDPAAGGHLKHQVGPDELGMAEPGESAVLAGMVLLRRLRNEEEVARDGGILPRLDEVDLAEALGRLAPQTSALSRTPGGLARLAQVVREVGVVELVYSEIEQASGLLADWVAGQAHRPRLPADEPDVLVGGAPWDQVLVKPGEVEALTPSARCQREDHSSAVLTTDGQAVVMTGSEVTQLGPLGRVLWERLAEPRALGELQEALVEAFGEHPDAPAITAEALASLRSQGLVRVV
>NC_013169.1|WP_015779603.1|1691809_1693990_-|S9-family-peptidase
MSASIPSQPPVAPRRPLVREHHGQVFTDPWEWLRDTEDPQVVAHLEAENAWTDEQLADQAPLRETLYGEIAGRTQQTDVSVPARHGQWWYYTRTVEGQQYPIHARVAATGEYAADRPRLDAGNVPAGEQVLLDGNAEAGDSTFFSLGGFTVSRDDARLAFATDTTGDERFDVTVVDLATGERIDESITGVGYGLCFSHDASQLFYVRVDESWRPHEVWRHTIGADPDTDELLHTETDEAWWMGLDSSGDERWVLIGKASSDSSEWWLVDATDPTSQPRVVQPRRDRLEYDVDVAGEDLLLVHTVNTPEGELATATVDAPGLEHWRQVTPPADGERLLGCELFEHFALVTLRRDGLTGLRVLPRGVDAGGAPPTDDAGGLTLGAAVDVAPDEALYSIGAGANPEFTATTLQVVTESLITPPTTSEYDLAPLLAGGPLPAPTVLRQQPVLGGYDPGAYTQERLWATAADDTRIPISVVRRSDLEPDGTAPGLLTGYGAYEVSSDPDFRISRLSLLDRGVVFAIAHVRGGGEMGRAWYESGRMEHKANSFTDLNACAHALIDAGWVDAGRLAVEGGSAGGLLLGAAINLEPDLYRAAHLAVPFVDALTTILNPELPLTVGEWTEWGNPLADPQVYEGMAAYTPYENVRAEQYPAMLATTSLNDTRVGCGEPTKWVQMVRSRATNDPIERPVLLRTEMVAGHGGRSGRYDAWRDRALELAFLLTHIGVDR
>NC_013169.1|WP_015779604.1|1694033_1694345_+|cupin
MRFLTASEYTADRAWGAQDLTVVEGASVRLHWTDEPYVWHVNDGTEVFVVLDGTVDMHYRADGVEHTERLAPGRICVAEAGDEHVAHPQGPARILVVEKQGSL
>NC_013169.1|WP_015779605.1|1694436_1697988_-|DNA-polymerase-III-subunit-alpha
MSAPGSAENFVHLHNHTEYSMLDGAARIDDMFTVADEMGMPAIASTDHGSVFGAYEFWSKSRKFETKPIVGVEAYLTPGTHRTDKTRVKFGDGGRNDVSGSGAYTHMTMWAETTEGMHNLFRASSLASIEGFYFKPRMDRELLDRYGKGIIATTGCPSGEVQTRLRLGQYDKAKEAAAEFRDIFGKDNFFCELMDHGLDIERQVRADLLKLAKELDLPLVATNDLHYTHKEDAKAHGALLCVQSGSTLMDPNRFKFDSDEFYLKSAAEMRHLWREVPEACDNTLLIAERCNVEFTEGEGRYMPRFPCPDGHDETSWFISEVQTGLARRFPEGVPDYALKQAAYEQDVIINKGYPGYFLVVADFINWAKENGIRVGPGRGSGAGSMCAYAMGITDLDPIPHGLIFERFLNPERASMPDFDVDFDERRRPEVIKYVTEKYGSDRVAMIVTYGTIKAKQALKDASRVMGFPFATGEKLTKAMPPAVMGKDIPLSGIFDEKHPRYAEAIDFRELHANDPEAREVFDTAVGLEGLKRQWGVHAAGVIMASEPLIDLIPIMRREADGQIITQFDYPSCETLGLVKMDFLGLRNLTILDDAIANIEMNREETIDLDALSKDMTDPAAYKLLARGDTLGVFQLDGGGMRSLLRLMQPDNFEDISAALALYRPGPMGANAHTNFALRKNGKQPVDYIHPELTEALEPILKMTYGLIIYQEQVMEIAQKLAGYTLGNADLLRRAMGKKKKEVLDAEYVNFEAGMLANGYSKDAVETLWGILLPFSDYAFNKAHTAAYGVVSYWTAYLKANYRAEYMAALLTSVRDDKDKSALYLGECRRMGIKVLPPDVNESIANFAAVGQDIRFGLEAIRNVGGNVVRAIVATREEKGKFTSFEDFLRKCPAVVCNKRTIDSLIKAGAFDDLGHQRQALATVHEAYVDALVGEKKEQERGQESLFASLMGDGGDDASSIGGMPAIPDLEWDKQTLLAFEREMLGLYVSDHPLFGIEHALSRASDTSIAHLNSEDGRPDGAEVTIAGLITQVVTKRNKRGELWAIATVEDLEGSIECLFFARTYMTVSTMLTQDVVCVVSGRVKRGDDAVSIFASDLRLPDLDDGPRGPVMIHMAMNQTTDAVVGKLRNVLSDHPGPTEVQIHLTQPGRRVVMRVEDSLRVEASNSLFGDLKQLLGPNCLPVA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1824867 : 1884916

Corynebacterium_phage(20.0%)

tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015779708.1\|1824867_1825836_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_015779709.1\|1825899_1826733_+	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_015779710.1\|1826791_1829452_+	pyruvate, phosphate dikinase	A0A2D2W2B1	Stenotrophomonas_phage	1.5e-85	39.3
WP_015779711.1\|1829561_1830404_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_015779712.1\|1830743_1831379_-	response regulator transcription factor	NA	NA	NA	NA
WP_081439808.1\|1831366_1832635_-	sensor domain-containing protein	NA	NA	NA	NA
WP_015779714.1\|1832688_1834074_-	ABC transporter permease	NA	NA	NA	NA
WP_015779715.1\|1834075_1834828_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.4e-17	32.2
WP_012802133.1\|1835034_1836282_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	2.0e-80	42.7
WP_015779716.1\|1836422_1837100_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015779717.1\|1837192_1838545_+	MFS transporter	NA	NA	NA	NA
WP_015779718.1\|1838748_1840281_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_015779719.1\|1840357_1840741_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_081439914.1\|1840855_1841653_+	hypothetical protein	NA	NA	NA	NA
WP_015779721.1\|1841680_1842298_-	regulatory protein RecX	NA	NA	NA	NA
WP_015779722.1\|1842451_1843555_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	5.4e-130	70.9
WP_041290912.1\|1843808_1844078_-	DUF3046 domain-containing protein	NA	NA	NA	NA
WP_015779724.1\|1844209_1844674_+	hypothetical protein	NA	NA	NA	NA
WP_081439915.1\|1844757_1845678_-	AEC family transporter	NA	NA	NA	NA
WP_015779726.1\|1845734_1850717_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_015779727.1\|1850709_1851498_+	Fpg/Nei family DNA glycosylase	NA	NA	NA	NA
WP_015779728.1\|1851802_1852177_+	VOC family protein	NA	NA	NA	NA
WP_015779730.1\|1853385_1853706_+\|transposase	transposase	A0A1B3AZF8	Gordonia_phage	1.1e-11	41.2
WP_015779731.1\|1854366_1855764_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.5e-31	34.7
WP_015779732.1\|1858222_1859302_-	GNAT family N-acetyltransferase	D0R097	Streptococcus_phage	3.6e-30	40.1
WP_015779733.1\|1859436_1859958_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_169307787.1\|1859965_1860418_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_041290913.1\|1860414_1861233_-	23S ribosomal RNA methyltransferase Erm	NA	NA	NA	NA
WP_015779735.1\|1862948_1863743_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_015779736.1\|1863809_1864145_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015779738.1\|1865606_1866323_-	YafY family transcriptional regulator	NA	NA	NA	NA
WP_015779739.1\|1866408_1867278_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_012802028.1\|1867679_1868930_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	6.2e-82	41.8
WP_015779741.1\|1870378_1870705_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041291497.1\|1870754_1871279_-	nicotinamide-nucleotide amidohydrolase family protein	NA	NA	NA	NA
WP_015779743.1\|1871275_1871896_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_015779744.1\|1871892_1873473_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_015779745.1\|1873598_1873898_-	hypothetical protein	NA	NA	NA	NA
WP_015779746.1\|1874171_1875521_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.0e-34	35.2
WP_143827368.1\|1875531_1875903_-	hypothetical protein	NA	NA	NA	NA
WP_015779748.1\|1875923_1876364_-	hypothetical protein	NA	NA	NA	NA
WP_041290915.1\|1878863_1880063_+	membrane dipeptidase	NA	NA	NA	NA
WP_015779751.1\|1880183_1880882_-	two pore domain potassium channel family protein	NA	NA	NA	NA
WP_015779752.1\|1880881_1884022_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	1.8e-101	49.2
WP_143827369.1\|1884151_1884916_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

2435334 : 2467336

Mycobacterium_phage(57.14%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015780253.1\|2435334_2436651_+\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	1.2e-179	71.7
WP_115306791.1\|2436720_2438040_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	8.8e-71	41.1
WP_143827380.1\|2438032_2438551_+	hypothetical protein	NA	NA	NA	NA
WP_015780254.1\|2438580_2439501_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015780255.1\|2439675_2440092_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_169307796.1\|2440278_2440851_+	hypothetical protein	A0A142KA64	Gordonia_phage	1.3e-15	37.5
WP_015780258.1\|2442282_2443533_-	MFS transporter	NA	NA	NA	NA
WP_015780259.1\|2443602_2444019_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_015780260.1\|2444180_2444984_-	ABC transporter permease	NA	NA	NA	NA
WP_015780261.1\|2444980_2445955_-	daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.2e-18	30.9
WP_015780262.1\|2446249_2447566_+\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	3.7e-194	76.7
WP_081439861.1\|2447553_2448126_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_169307797.1\|2448026_2448915_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_143827382.1\|2449150_2449621_+	hypothetical protein	NA	NA	NA	NA
WP_143827383.1\|2449775_2450156_+	hypothetical protein	NA	NA	NA	NA
WP_015780264.1\|2450366_2451527_-	pyruvate, phosphate dikinase	NA	NA	NA	NA
WP_015780265.1\|2451586_2451982_+	DNA-binding protein	NA	NA	NA	NA
WP_015780266.1\|2451978_2452614_+	hypothetical protein	NA	NA	NA	NA
WP_015780267.1\|2452762_2453431_-	response regulator transcription factor	NA	NA	NA	NA
WP_015780268.1\|2453427_2454642_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_015780269.1\|2454783_2455683_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.8e-41	40.0
WP_015780270.1\|2455679_2456432_+	ABC transporter permease	NA	NA	NA	NA
WP_015780271.1\|2456436_2457183_+	ABC transporter permease	NA	NA	NA	NA
WP_049758567.1\|2457207_2457474_+	hypothetical protein	NA	NA	NA	NA
WP_081439864.1\|2458248_2459151_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_081439865.1\|2459120_2459960_-	NAD(P)-binding protein	NA	NA	NA	NA
WP_015780274.1\|2459959_2460439_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_015780275.1\|2460435_2461092_-	hypothetical protein	NA	NA	NA	NA
WP_015780276.1\|2461183_2461519_-	hypothetical protein	NA	NA	NA	NA
WP_015780277.1\|2461547_2462552_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_015780278.1\|2462548_2463733_-	MFS transporter	NA	NA	NA	NA
WP_169307798.1\|2463980_2464319_-	hypothetical protein	NA	NA	NA	NA
WP_015780280.1\|2464384_2464735_-	hypothetical protein	NA	NA	NA	NA
WP_015780281.1\|2464763_2465399_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_015780282.1\|2465486_2465936_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_015780041.1\|2465983_2467336_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	5.9e-187	73.1

DBSCAN-SWA_3

2613331 : 2664307

Mycobacterium_phage(18.18%)

holin,integrase,transposase

attL 2627611:2627629|attR 2644881:2644899

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015780426.1\|2613331_2613799_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_015780427.1\|2613872_2614511_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_115306704.1\|2614549_2615350_-	endonuclease III	NA	NA	NA	NA
WP_015780429.1\|2615424_2616102_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_115306821.1\|2616230_2616962_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_015780431.1\|2617064_2617937_-	NUDIX family protein	NA	NA	NA	NA
WP_015780432.1\|2617938_2618412_-	RidA family protein	NA	NA	NA	NA
WP_015780433.1\|2618411_2618570_-	DUF4177 domain-containing protein	NA	NA	NA	NA
WP_015780434.1\|2618611_2621065_+	transglycosylase domain-containing protein	NA	NA	NA	NA
WP_015780435.1\|2621152_2621605_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	1.3e-13	38.2
WP_049758708.1\|2621743_2622715_+	metallophosphoesterase	NA	NA	NA	NA
WP_015780437.1\|2622711_2623536_+	NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.7e-09	30.6
WP_015780438.1\|2623661_2625014_+	aspartate kinase	NA	NA	NA	NA
WP_015780439.1\|2625156_2625702_+	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_015780440.1\|2625865_2626231_+	VOC family protein	NA	NA	NA	NA
WP_115306820.1\|2626336_2626804_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_143827389.1\|2626763_2626970_-	hypothetical protein	NA	NA	NA	NA
WP_015780443.1\|2627073_2627433_+	VOC family protein	NA	NA	NA	NA
WP_015780444.1\|2627461_2628127_-	GAP family protein	NA	NA	NA	NA
2627611:2627629	attL	NA	NA	NA	NA
WP_115306819.1\|2628212_2628821_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_041291716.1\|2628967_2630068_+	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_015780447.1\|2630064_2631315_+	CoA transferase	NA	NA	NA	NA
WP_015780262.1\|2631956_2633273_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	3.7e-194	76.7
WP_010155367.1\|2633430_2633820_-	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA
WP_010155368.1\|2633924_2635349_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	5.3e-45	30.4
WP_010155369.1\|2635369_2636020_+	organomercurial lyase MerB	NA	NA	NA	NA
WP_015780449.1\|2636164_2637493_+\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	3.4e-195	76.3
WP_015780450.1\|2637547_2638546_+	hypothetical protein	NA	NA	NA	NA
WP_015780451.1\|2638556_2639051_-	hypothetical protein	NA	NA	NA	NA
WP_143827390.1\|2639401_2639857_+	hypothetical protein	NA	NA	NA	NA
WP_115306703.1\|2640046_2640448_+	hypothetical protein	NA	NA	NA	NA
WP_015780454.1\|2640497_2641100_-	cadmium resistance transporter	NA	NA	NA	NA
WP_006590980.1\|2641096_2641456_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041291718.1\|2641650_2642247_+	recombinase family protein	I1ZBD6	Salisaeta_icosahedral_phage	5.6e-25	40.4
WP_015780456.1\|2642457_2643459_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_015780457.1\|2643455_2644259_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	3.0e-45	42.8
WP_015780458.1\|2644839_2645436_-	cadmium resistance transporter	NA	NA	NA	NA
2644881:2644899	attR	NA	NA	NA	NA
WP_041290965.1\|2645800_2646295_-	signal peptidase II	NA	NA	NA	NA
WP_015780460.1\|2646291_2648262_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.2e-100	38.5
WP_015780461.1\|2648258_2648618_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015780462.1\|2649395_2650334_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-18	29.8
WP_015780463.1\|2650330_2651929_+	antibiotic ABC transporter	NA	NA	NA	NA
WP_041291719.1\|2651990_2653250_+	cytochrome P450	NA	NA	NA	NA
WP_012802028.1\|2653378_2654629_-\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	6.2e-82	41.8
WP_115306818.1\|2655250_2655673_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_115306702.1\|2655728_2656346_-	vitamin K epoxide reductase family protein	NA	NA	NA	NA
WP_172465372.1\|2656326_2656989_-	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_015780469.1\|2660082_2661669_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA
WP_015780470.1\|2661661_2662576_-	cation transporter	NA	NA	NA	NA
WP_015780471.1\|2663056_2664307_-\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	4.7e-82	41.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_013169

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection