CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_013521	Sanguibacter keddieii DSM 10542, complete sequence	4 crisprs	cas3,csa3,DEDDh,WYL,cas4,DinG,PD-DExK	0	6	1	0

1. NC_013521

CRISPR-Cas detection and classification

Crispr_ID: NC_013521_1

• CRISPR_ID: NC_013521_1
• CRISPR_location: 291042-291425
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 7 spacers

Consensus repeat of NC_013521_1

Consensus_repeat	Method
CCGTCGCCGTAGTTGTTGATGGTG	CRISPRCasFinder

spacers of NC_013521_1

>1.1|291066|27|NC_013521|CRISPRCasFinder
ATGAGACCGTCGGTGTAGATGCCCGAG
>1.2|291117|30|NC_013521|CRISPRCasFinder
ACGCCGTCCTCGCCGGTGTAGACCCCGGAC
>1.3|291171|27|NC_013521|CRISPRCasFinder
CCCGTCTCGTCGGTCCGGGTGCCGGAG
>1.4|291222|27|NC_013521|CRISPRCasFinder
ACCGTCTCGTCGGAGTAGACGCCCGCG
>1.5|291273|27|NC_013521|CRISPRCasFinder
ACGGTGTCGCTCGAGTACACGCCCGAC
>1.6|291324|27|NC_013521|CRISPRCasFinder
ACCCCGTCGATGACGTAGGTGCCGGAG
>1.7|291375|27|NC_013521|CRISPRCasFinder
CCGTCCGGTCCCGTGTACACGCCAGAC

CRISPR arrays and Neighbor proteins around NC_013521_1

CRISPR arrays

The CRISPR arrays of NC_013521_1

>merge|NC_013521|1|291042-291425|CRISPRCasFinder
CCCTGGCCGTCGTTCTGGATGGTGATGAGACCGTCGGTGTAGATGCCCGAGCCGTCGCCGTAGTTGTTGATGGTGACGCCGTCCTCGCCGGTGTAGACCCCGGACCCGTCGCCGTAGTTGGTGATGGTGCCCGTCTCGTCGGTCCGGGTGCCGGAGCCGTCGCCGTAGACGGAGAGGGAGACCGTCTCGTCGGAGTAGACGCCCGCGCCGTCGCCGTAGTTGGCCACCGAGACGGTGTCGCTCGAGTACACGCCCGACCCGTCGCCGTAGACGGTGACCGAGACCCCGTCGATGACGTAGGTGCCGGAGCCGTCGCCGTAGTTGACCGTGGTGCCGTCCGGTCCCGTGTACACGCCAGACCCGTCGCCGTAGAGCAGGACGTTG

>NC_013521|1|1|291042-291425|CRISPRCasFinder
CCCTGGCCGTCGTTCTGGATGGTG	ATGAGACCGTCGGTGTAGATGCCCGAG
CCGTCGCCGTAGTTGTTGATGGTG	ACGCCGTCCTCGCCGGTGTAGACCCCGGAC
CCGTCGCCGTAGTTGGTGATGGTG	CCCGTCTCGTCGGTCCGGGTGCCGGAG
CCGTCGCCGTAGACGGAGAGGGAG	ACCGTCTCGTCGGAGTAGACGCCCGCG
CCGTCGCCGTAGTTGGCCACCGAG	ACGGTGTCGCTCGAGTACACGCCCGAC
CCGTCGCCGTAGACGGTGACCGAG	ACCCCGTCGATGACGTAGGTGCCGGAG
CCGTCGCCGTAGTTGACCGTGGTG	CCGTCCGGTCCCGTGTACACGCCAGAC
CCGTCGCCGTAGAGCAGGACGTTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013521.1|WP_012865299.1|283914_284940_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213235
NC_013521.1|WP_012865305.1|289846_290500_-|DUF3060-domain-containing-protein	unknown	unknown	gnl|CDD|371435
NC_013521.1|WP_143755609.1|287499_288033_+|hypothetical-protein	unknown	unknown	unknown
NC_013521.1|WP_012865301.1|286058_287228_-|DUF1524-domain-containing-protein	unknown	unknown	gnl|CDD|377857
NC_013521.1|WP_012865314.1|299044_299527_-|hypothetical-protein	unknown	unknown	unknown
NC_013521.1|WP_012865296.1|280825_281755_+|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|176125
NC_013521.1|WP_012865298.1|282995_283718_-|thioredoxin-domain-containing-protein	unknown	unknown	gnl|CDD|372611
NC_013521.1|WP_012865309.1|294226_295513_-|MFS-transporter	unknown	unknown	gnl|CDD|340871
NC_013521.1|WP_012865310.1|295640_296276_+|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|132427
NC_013521.1|WP_012865304.1|289088_289850_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_013521.1|WP_012865297.1|281788_282826_-|glycoside-hydrolase-family-43-protein	unknown	unknown	gnl|CDD|350097
NC_013521.1|WP_143755611.1|299676_300345_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|274357
NC_013521.1|WP_012865316.1|300341_300833_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|274357
NC_013521.1|WP_012865312.1|297922_298357_+|hypothetical-protein	unknown	unknown	gnl|CDD|239806
NC_013521.1|WP_012865300.1|284936_285923_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224196
NC_013521.1|WP_042438328.1|292257_292767_+|DUF2231-domain-containing-protein	unknown	unknown	gnl|CDD|370772
NC_013521.1|WP_143755610.1|288099_289092_-|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NC_013521.1|WP_012865308.1|292861_294085_-|family-1-glycosylhydrolase	unknown	unknown	gnl|CDD|274539
NC_013521.1|WP_012865311.1|296446_297490_+|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|274817
NC_013521.1|WP_012865313.1|298356_298995_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013521.1|WP_012865299.1|283914_284940_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	6.5371e-89
NC_013521.1|WP_012865305.1|289846_290500_-|DUF3060-domain-containing-protein	gnl|CDD|371435	pfam11259, DUF3060, Protein of unknown function (DUF3060). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed.	0.00156584
NC_013521.1|WP_012865301.1|286058_287228_-|DUF1524-domain-containing-protein	gnl|CDD|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	1.70398e-32
NC_013521.1|WP_143755611.1|299676_300345_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	2.89162e-22
NC_013521.1|WP_012865296.1|280825_281755_+|LysR-family-transcriptional-regulator	gnl|CDD|176125	cd08434, PBP2_GltC_like, The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold. GltC, a member of the LysR family of bacterial transcriptional factors, activates the expression of gltA gene of glutamate synthase operon and is essential for cell growth in the absence of glutamate. Glutamate synthase is a heterodimeric protein that encoded by gltA and gltB, whose expression is subject to nutritional regulation. GltC also negatively auto-regulates its own expression. This substrate-binding domain has strong homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.34811e-64
NC_013521.1|WP_012865298.1|282995_283718_-|thioredoxin-domain-containing-protein	gnl|CDD|372611	pfam13462, Thioredoxin_4, Thioredoxin.	1.25545e-18
NC_013521.1|WP_012865309.1|294226_295513_-|MFS-transporter	gnl|CDD|340871	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters. This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.2284e-29
NC_013521.1|WP_012865310.1|295640_296276_+|TetR-family-transcriptional-regulator	gnl|CDD|132427	TIGR03384, betaine_BetI, transcriptional repressor BetI. BetI is a DNA-binding transcriptional repressor of the bet (betaine) regulon. In sequence, it is related to TetR (pfam00440). Choline, through BetI, induces the expression of the betaine biosynthesis genes betA and betB by derepression. The choline porter gene betT is also part of this regulon in Escherichia coli. Note that a different transcriptional regulator, ArcA, controls the expression of bet regulon genes in response to oxygen, as BetA is an oxygen-dependent enzyme. [Regulatory functions, DNA interactions].	4.27896e-08
NC_013521.1|WP_012865304.1|289088_289850_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.18329e-68
NC_013521.1|WP_012865308.1|292861_294085_-|family-1-glycosylhydrolase	gnl|CDD|274539	TIGR03356, BGL, beta-galactosidase.	6.75823e-79
NC_013521.1|WP_012865316.1|300341_300833_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	2.04534e-19
NC_013521.1|WP_012865312.1|297922_298357_+|hypothetical-protein	gnl|CDD|239806	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.	0.0017888
NC_013521.1|WP_012865300.1|284936_285923_+|ABC-transporter-permease	gnl|CDD|224196	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only].	3.92767e-07
NC_013521.1|WP_042438328.1|292257_292767_+|DUF2231-domain-containing-protein	gnl|CDD|370772	pfam09990, DUF2231, Predicted membrane protein (DUF2231). This domain, found in various hypothetical bacterial proteins, has no known function.	0.00258551
NC_013521.1|WP_143755610.1|288099_289092_-|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.40732e-41
NC_013521.1|WP_012865297.1|281788_282826_-|glycoside-hydrolase-family-43-protein	gnl|CDD|350097	cd08983, GH43_Bt3655-like, Glycosyl hydrolase family 43 protein such as Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase Bt3655. This glycosyl hydrolase family 43 (GH43)-like family includes the characterized arabinofuranosidases (EC 3.2.1.55): Bacteroides thetaiotaomicron VPI-5482 (Bt3655;BT_3655) and Penicillium chrysogenum 31B Abf43B, as well as Bifidobacterium adolescentis ATCC 15703 beta-xylosidase (EC 3.2.1.37) BAD_1527. It belongs to the glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) which includes family 43 (GH43) and 62 (GH62) families. GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	3.14684e-79
NC_013521.1|WP_012865311.1|296446_297490_+|LLM-class-flavin-dependent-oxidoreductase	gnl|CDD|274817	TIGR03858, LLM_2I7G, probable oxidoreductase, LLM family. This model describes a highly conserved, somewhat broadly distributed family withing the luciferase-like monooxygenase (LLM) superfamily. Most members are from species incapable of synthesizing coenzyme F420, bound by some members of the LLM superfamily. Members, therefore, are more likely to use FMN as a cofactor.	0

Protein sequences

>NC_013521.1|WP_012865305.1|289846_290500_-|DUF3060-domain-containing-protein
MTPRPQPASATPPDGASRAHRGSLLVRAAAAAAGLALLTGCTVEVVDRREDTASPSSDEVSRDDDASSGTTTPGSTETTDDASEPESPDDAPGEPAEPADPTGGTTEPADDDSPTPVATPSAPTSTVSCADDGTLVLWQASQAVELTEDCDHVTVAASDVQLTARSITTLEIAAAGVVVHATEIESLSVAGAGNTVVWDEGSPSITDDGADNVLVAS
>NC_013521.1|WP_012865304.1|289088_289850_-|response-regulator-transcription-factor
MTAPGAGAASAAVPGPDSTRPAVLLVDDEEAITGALAPFLERSGFEVRVAHDGQEALDTLDVWHADVVVSDVMMPRLDGRELVRRLRTRDDWTPVVLLTQVGESFERSAALDEGADDYLNKPFNPQELASRIRAVLRRSVGGEKPLSAADRLVSGDLLVDRTARRVFLAGAEVVLTPRASLLLDYLMTHPRELHTRERLLQALWGFDLVPSTRAVDHRVAEIRRVLHDDAGAPRYVETVPNLGYRFCGQVRRA
>NC_013521.1|WP_143755610.1|288099_289092_-|HAMP-domain-containing-histidine-kinase
MSGGSRSTGAPGPSRRPGSPWSSPWVLVPTVVGLVVAVVLLVAGNPQGLRFTVPLATVVGVAGVGLGLVALAVLMLRRALARARAAGAAQAREVERVAHRRFLDRLDHELKNPLTAIHAAAASVSATTTDDDRHSPVAVIDAQAARMGRLVGDLRKIAALDSQPIEQEPVDVEALAEDVVSAVQEELAVQGELAGQGAAGRDITVALPRVPWPLPPVRGDVDLLFVALYNVLSNAVKFSPEGARIELRGFEEEGAVVLEVADSGAGIPPDEVSFVWDELARGSNTRGVQGSGLGLAMVHAVVRRHGGQVQLSSRLGHGTSVRLRLPTARG
>NC_013521.1|WP_143755609.1|287499_288033_+|hypothetical-protein
MMKKMSGTLIAVLVAVGLAAVPGGAASADDGGTAASGALAGARGSAEVQRTLQQLAGEQPSDEIEAMMASGLPVEVAYDLETEVFTAAVWVREADINRAISQLGPGCSATSVCIRNSVPHGYIGTGTRAGPWSNVNYLFAGTDRATNFRFSGGGGIELQRSVSWSPPTRPTIASFSR
>NC_013521.1|WP_012865301.1|286058_287228_-|DUF1524-domain-containing-protein
MRARLSSSRPRSSSPRRPLSLAGARRGTAAALLAALLLAGCSAEAAPTTPTEVAEPTATVEPTPEPTRELPAPQLAGPVDVVEVTTGATPQTALATVTLLEVKGRAPKTGYSRDNFGARWADVDRNGCDTRNDILARDLTALTYKDGTQECVVLTGTLDDRYSGTTIAFERGEKTSTAVQIDHVVALSDAWQKGAQAWDDEKRTAFANDPLNLWAADGPLNGQKGDGDTATWLPPNKAFRCEYVARQVGVKFTYGLWVTEAEQVAMASVLSTCPDQPLPEGSAVPELPAPEPEPTTEAPAPAPAPAPAPAPEPAPAPVPAVEPAPAPVVEEAPVVEAPPAPAPEPEPVPAAWSYKNCTEAREAGAAPVYEGTPGYGVHLDRDRDGIGCE
>NC_013521.1|WP_012865300.1|284936_285923_+|ABC-transporter-permease
MMRLLKVELDRFFSRRSTQVALVGLLGMVLVALFATYQTSKPASEAEVAQATEWYEEQLVYWEENGKQEMADCLADEAAEQETNPDVDWGCKYLEPQLENYLQADRDLVDQAAGLVPAIGFATAFFAFVVGVSFVAAEFATGSMGSWLTFEPRRTRVFWSKTVAAGLGVVVPTILASVLVVAGSWGLFAAWGAADGVTAEVWSEVAVGGLRVLLLTVGFAVLGAALAMILRSTAAAIGLAVGYFVVVEGFLVQMVSGAQAWSLFQSFQAVLRGSSTYGVEDCTTTSSGVSCTWVERTVSLTHGAVELTVLLAVVLAVALVVFRRRDVS
>NC_013521.1|WP_012865299.1|283914_284940_+|ATP-binding-cassette-domain-containing-protein
MPAHAQTASPPPDVDPRSLAVSTRALRKTYRTRHGRHVAVQGLDLDVPIGGVHGFLGPNGSGKTTSIRMLLGLVRADSGTMSIFGQEVPQALPDVVGRVGAIVEQPKFFPTFTARKNLDLLAAAIGTPAVEVGKVLEAVGLDDRAKDRYKTYSLGMKQRLAIAATLLKDPDLLIFDEPTNGLDPAGIREIRTTMRGLADQGKTVLVSSHILAEVEQVADTVSIIGHGRLLASGRVEDIIAGTSTTVRVGIADPAAARTVLERAGLTVRTDHDALMVDGVDDPADITRRLAHDGLFVRELVSVKAGLEAVFLQLTAGEGPGTQAPPGPDGRPTRRSRRGGDR
>NC_013521.1|WP_012865298.1|282995_283718_-|thioredoxin-domain-containing-protein
MWTPRTSRRARPLAVSALAMSLLLAGCSSDEQPRPSAVASADQTVAQQTPTAATTGAVTVTSTSVVLGDPDAPERVVVYSDLACPHCKVLHGFMADDIDRWAAGSDVAVELVTVDYLSPRTTHEFSLLGANLLALVAEDSPEAWPAVQSALYDLQPGSTTDSALTVDDLVAVAEDAGATLDDDASERLAQLAYSGWVESVTGSAAAAGVTSIPQVFVDGSQVSGESHEETAALVRAAVGG
>NC_013521.1|WP_012865297.1|281788_282826_-|glycoside-hydrolase-family-43-protein
MTDSRTPDAPATSAAAADGTPDWAGYVMVHHDDATHQVHAMLSDGPDPTTWRALDGGAGILTSALGEQGLRDPHLLRSADGSRFYLIATDLDIRVTERPGVTGSFWDWLGRHGSRSINVWESADLMTWGPQRQVEVSPPSAGMAWAPKSVWDPAAEAYLVLWSARLYADDDPDHTGDGIHRLLGAHTTDFVTFTEPRDHGHPTRSVIDALVVRDGGFTDDDGDTDDDGTGWVRFVKDEAAGLVFSERSDDLHAPVWEPVSDSVTAGTETGIVEGPLAFRSFTDGEWYLWVDEYTGADRGYVPFHASSLTAERWEPVVDYTFPGKIKHGTVLPVTATEYARLVERV
>NC_013521.1|WP_012865296.1|280825_281755_+|LysR-family-transcriptional-regulator
MSADPVAALLPHLRLLVALGEVEHVTIAAAMLGVPQPTVSRTVRRLEQQIGAPLLEPDGRGVRLTPAARTLVPYAQRALDVLTDGLAAVETEGQRARTTVRIAFQTSLGEQLVPELIRTVRADDPTVRFVLSQGARSSCLDSLLEREADIALVSRLDPPPDGVRVVPLFEQELVLLVPEGHPAALAGGAAVVDLASEPLVTLKTGYGLRGSVDELFAEAGVLPSIAFEGEDLHTLTGLVAAGLGVAVAPRTTATPAGCVQVPLADARASRDIGAAVLPAPSSEVVVRVLDALRSLTGPGQADAGVDPGP
>NC_013521.1|WP_042438328.1|292257_292767_+|DUF2231-domain-containing-protein
MATPLLGVAHALEEAEVLDGPADLARPWAQWLTAEPVRRAALQGAWLGHKLHPVLSDLPVGFWSSATTLDLLQGEKSAKAADTLVALGIATAVPTALTGWADWGSAPKKTQRVGIVHAAANAAALTLYTASLIQRRRGKRTSGVVLGLVASGALGAGGFLGGHMAAPGS
>NC_013521.1|WP_012865308.1|292861_294085_-|family-1-glycosylhydrolase
MSVSPTTDRPNSVRPLSVPAGFLWGASTAAHQIEGNNTASDWWHLETTPGSHVVEPSGDAADSYHRWAEDMDILVDLGLTDYRFSIEWARIEPTEGRFSNAELAHYRRMVDGAIERGLRPVVTLHHFTVPQWFAARGGWTAPGAVELFVRYVERTAPVIGTGVSHVCTINEPNMVAMFGAIASLGAEAFREAGLPLPDAATTEVLVEAHHAARAAIKAIDPQIQVGWTIANQVYQALPGAEAVTAEYSWPREDVFLVAARDDDWVGVQSYTRTRVGTDGPLHPEPGVELTLSGYEFYPQAVGEAARHTWEVTEHTPVIVTENGLSVTDDTRRVAYLHGALDSLERAMADGVDIRGYLHWSLLDNYEWGSYAPTFGLVAVDRETFERHPKPSAHELGRIAQGGAFPRP
>NC_013521.1|WP_012865309.1|294226_295513_-|MFS-transporter
MSLTSDPSTSPQSRDGLDVGPATPDVQPARPRLGRIAPVFLVAHFGWMLPVAAGGTLIQALMEQIDADAKVALYAVLSVVGAVAGMLANIVFGALSDRTRTRWGSRNPWILVGGLVAAAAVMTMSVAPSFALLVVLWGVFQVSLNAFLGPLIAILADRVAPESLGKASSVVGVGQLLAQSLGGVVAASFLAVPRDGLKVVPLTLVVAALVVFFFARDTDNRGVPRPALNARELLATFRVPRDADFLWALAGRFLLLLSFMLVVLYQLFVLTDYVGLTTEQAAPVIATGGLIMAASSGLSTLVSGPLSDWLGRRKALVMGASFVLAFATVPLAVSPTVTSFYLFLAVGGFAYGIYVAVDQALMAEVLPDQENRAKDLGILNVANTGPQILAPVIAGVIVSLAGYRGIFVTAIVVAIVSALCIKPIRRVR
>NC_013521.1|WP_012865310.1|295640_296276_+|TetR-family-transcriptional-regulator
MNRPRGPYAKTARRREEILQAALEAYAESDAAGPTIKDIARRAGLSEAGVLHHFGGREELLTAVVAERDEVDARAYADHFAPLVQHNMQTPGLVRLFTRIAAASVESDHPANEFFAARYARLRDEIGATGPGGGDDEDAWRARVMLAVVDGLQLQWLHDPSIDMAGDAVRLAEALGLALDEEAPADGTDEPDQTPGSAGPVSGGSPAAPGS
>NC_013521.1|WP_012865311.1|296446_297490_+|LLM-class-flavin-dependent-oxidoreductase
MSNALEFGIDTFGDVTPGPDGTLKSHAQVIRDVVEEGVLADQVGLDFIGIGEHHRADYSISAPDTVLTAIAAKTERIRVGSAVTVLSSDDPIRVFQRFATIDAISNGRAEVILGRGSFIESFPLFGYDLQQYEELFEEKLDLFMKVREQNPVTWSGTTRRSLTDQEVFPHVENGLLPAWIAVGGSPQSVVRAAGYGLPLMLAIIGGDPLAFKQFTDLYRRALGEFGKPLQPVGVHAPGYIAETDEQAMEDSWPLIGKYFSKIALERGGRAMGEGQFRAQVGPEGAYFIGSPETVAKKIVRVVKGLDLDRFDFKYANGPMEHGKLLNSLELYGTKVVPLVREMLHDGA
>NC_013521.1|WP_012865312.1|297922_298357_+|hypothetical-protein
MPKTTFNVRYVAVNDQWTQHFNDSRARWNNTSGTGVSIGKTTTAAATMTASRYNESWYGLYSPSGVRGINRVFSIKINARTLSDNAGGNLTAWINSTSTHELGHALSLSDNPDTTKASLMKHSRNRTTVIKPQAYDISEVKRIY
>NC_013521.1|WP_012865313.1|298356_298995_+|hypothetical-protein
MRTRLETALAATAAVAALTVAGCSAPDVDGSAAGGDDSVTLSADYPVYDSLEAAGDEADAVVRGVYISSEVDLLYPIVDAGGDAETNPQDGVDVSQEDLDEMAVVITVSRVEVTEVLKGDLQVGDVIEVSQLGGRYDDVQYDEESTTLLEQVAATEVVVLLNDTGAGRFDLINPAQGLFEVEGDSVTAVEPDSGLGDVDTLDAIRELVAEPS
>NC_013521.1|WP_012865314.1|299044_299527_-|hypothetical-protein
MLAAAACLAVTIVALVAVPRLLEPDAPLADSAYYESFEQLESASANLVAATVMTDARVVVEGNDMVSYTVSVAAVTGDGREGQIDVLVPAVADGIEPTAEAEPLQVGQEYVLALSPLGDRWQLTSPAGQSAFLVHGDQVGASLDGSLTVSPAAAEALGLR
>NC_013521.1|WP_143755611.1|299676_300345_-|sigma-70-family-RNA-polymerase-sigma-factor
MTLAGLKRSWHPGPLTRQVVGRASRAREYRHSQGEGLEACKERAHMDNSVSMKHQHTVDLKTTKVFTALFEDHYDRVVRFVVRRVDNEADATELAAETFRRAWELSRREGRVPSPAWLFATARHTVGDLYRSRERASRLEAGLCDRTSLPPTDDAADDVLQALSALSTTDRELLQLRYWDDLTVSEISHLLEVSASTLWVRLHRARRRFADHYTQTEQRTAS
>NC_013521.1|WP_012865316.1|300341_300833_-|sigma-70-family-RNA-polymerase-sigma-factor
MFSTFFTTNYPPALRLAERRLSSRDDAEEVVTEAFRIMWERSVAGGSLSVPWLYGVLRNLVGNEYRRRLRSAELRRTLADDLRIVRPRADDACLDVRDALLRLPPLHREVLVMTYWGRLTDHEIAGALEITPAAVRSRLTRARALLRSTLLADPVTENRLTVT

Crispr_ID: NC_013521_2

• CRISPR_ID: NC_013521_2
• CRISPR_location: 1096750-1096839
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013521_2

Consensus_repeat	Method
CGGACCAGCATGCGCCCCGGAGC	CRISPRCasFinder

spacers of NC_013521_2

>2.1|1096773|44|NC_013521|CRISPRCasFinder
CTCGAGCCCGTCGGACCGCAGGCGCACCTGAGCCCCGAGACTGC

CRISPR arrays and Neighbor proteins around NC_013521_2

CRISPR arrays

The CRISPR arrays of NC_013521_2

>merge|NC_013521|2|1096750-1096839|CRISPRCasFinder
CGGACCAGCATGCGCCCCGGAGCCTCGAGCCCGTCGGACCGCAGGCGCACCTGAGCCCCGAGACTGCCGGACCAGCATGCGCCCCGTAGC

>NC_013521|2|2|1096750-1096839|CRISPRCasFinder
CGGACCAGCATGCGCCCCGGAGC	CTCGAGCCCGTCGGACCGCAGGCGCACCTGAGCCCCGAGACTGC
CGGACCAGCATGCGCCCCGTAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013521.1|WP_042438621.1|1096293_1096506_+|mycothiol-system-anti-sigma-R-factor	unknown	unknown	gnl|CDD|188261
NC_013521.1|WP_012865979.1|1109491_1110532_+|HlyC/CorC-family-transporter	unknown	unknown	gnl|CDD|224173
NC_013521.1|WP_042437780.1|1099971_1103859_-|multifunctional-oxoglutarate-decarboxylase/oxoglutarate-dehydrogenase-thiamine-pyrophosphate-binding-subunit/dihydrolipoyllysine-residue-succinyltransferase-subunit	unknown	unknown	gnl|CDD|237030
NC_013521.1|WP_012865974.1|1104178_1104997_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|372253
NC_013521.1|WP_081447925.1|1099165_1099876_-|lysophospholipase	unknown	unknown	gnl|CDD|238873
NC_013521.1|WP_012865962.1|1089812_1090355_-|hypothetical-protein	unknown	unknown	unknown
NC_013521.1|WP_012865963.1|1090743_1091232_+|hypothetical-protein	unknown	unknown	unknown
NC_013521.1|WP_081447924.1|1095628_1096267_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|131992
NC_013521.1|WP_012865961.1|1086662_1089458_+|preprotein-translocase-subunit-SecA	unknown	unknown	gnl|CDD|237259
NC_013521.1|WP_012865977.1|1107158_1107893_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_013521.1|WP_012865966.1|1093260_1094607_-|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl|CDD|235037
NC_013521.1|WP_012865978.1|1108163_1109495_+|HlyC/CorC-family-transporter	unknown	unknown	gnl|CDD|224173
NC_013521.1|WP_012865964.1|1091361_1092162_-|histidinol-phosphatase	unknown	unknown	gnl|CDD|273949
NC_013521.1|WP_012865965.1|1092220_1093255_-|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl|CDD|206747
NC_013521.1|WP_012865967.1|1094735_1095314_-|DoxX-family-membrane-protein	unknown	unknown	unknown
NC_013521.1|WP_081447923.1|1084357_1086520_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224055
NC_013521.1|WP_012865971.1|1098163_1099018_+|DUF4097-family-beta-strand-repeat-protein	unknown	unknown	gnl|CDD|372574
NC_013521.1|WP_012865976.1|1105993_1107142_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|182539
NC_013521.1|WP_012865970.1|1096888_1097977_+|PilT/PilU-family-type-4a-pilus-ATPase	unknown	unknown	gnl|CDD|225364
NC_013521.1|WP_012865975.1|1104993_1105953_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213235

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013521.1|WP_042438621.1|1096293_1096506_+|mycothiol-system-anti-sigma-R-factor	gnl|CDD|188261	TIGR02949, putative_anti-sigma_factor, anti-sigma factor, TIGR02949 family. This group of anti-sigma factors are associated in an apparent operon with a family of sigma-70 family sigma factors (TIGR02947). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is restricted to the Actinobacteria. [Transcription, Transcription factors].	6.08641e-19
NC_013521.1|WP_042437780.1|1099971_1103859_-|multifunctional-oxoglutarate-decarboxylase/oxoglutarate-dehydrogenase-thiamine-pyrophosphate-binding-subunit/dihydrolipoyllysine-residue-succinyltransferase-subunit	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0
NC_013521.1|WP_012865974.1|1104178_1104997_-|ABC-transporter-permease	gnl|CDD|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	0.000484215
NC_013521.1|WP_081447925.1|1099165_1099876_-|lysophospholipase	gnl|CDD|238873	cd01835, SGNH_hydrolase_like_3, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	1.18133e-57
NC_013521.1|WP_012865961.1|1086662_1089458_+|preprotein-translocase-subunit-SecA	gnl|CDD|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NC_013521.1|WP_081447924.1|1095628_1096267_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|131992	TIGR02947, putative_RNA_polymerase_sigma_factor, RNA polymerase sigma-70 factor, TIGR02947 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and (with the exception of a paralog in Thermobifida fusca YX) one-to-a-genome distribution, to represent a conserved family. This family is restricted to the Actinobacteria and each gene examined is followed by an anti-sigma factor in an apparent operon.	1.3838e-105
NC_013521.1|WP_012865971.1|1098163_1099018_+|DUF4097-family-beta-strand-repeat-protein	gnl|CDD|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	7.01622e-12
NC_013521.1|WP_012865977.1|1107158_1107893_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.44433e-84
NC_013521.1|WP_012865966.1|1093260_1094607_-|3-phosphoshikimate-1-carboxyvinyltransferase	gnl|CDD|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	9.68346e-162
NC_013521.1|WP_012865978.1|1108163_1109495_+|HlyC/CorC-family-transporter	gnl|CDD|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	3.35104e-111
NC_013521.1|WP_012865964.1|1091361_1092162_-|histidinol-phosphatase	gnl|CDD|273949	TIGR02067, his_9_HisN, histidinol-phosphatase, inositol monophosphatase family. This subfamily belongs to the inositol monophosphatase family (pfam00459). The members of this family consist of no more than one per species and are found only in species in which histidine is synthesized de novo but no histidinol phosphatase can be found in either of the two described families (TIGR01261, TIGR01856). In at least one species, the member of this family is found near known histidine biosynthesis genes. The role as histidinol-phosphatase wsa first proven in Corynebacterium glutamicum. [Amino acid biosynthesis, Histidine family].	4.28552e-91
NC_013521.1|WP_012865965.1|1092220_1093255_-|ribosome-small-subunit-dependent-GTPase-A	gnl|CDD|206747	cd01854, YjeQ_EngC, Ribosomal interacting GTPase YjeQ/EngC, a circularly permuted subfamily of the Ras GTPases. YjeQ (YloQ in Bacillus subtilis) is a ribosomal small subunit-dependent GTPase; hence also known as RsgA. YjeQ is a late-stage ribosomal biogenesis factor involved in the 30S subunit maturation, and it represents a protein family whose members are broadly conserved in bacteria and have been shown to be essential to the growth of E. coli and B. subtilis. Proteins of the YjeQ family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases. All YjeQ family proteins display a unique domain architecture, which includes an N-terminal OB-fold RNA-binding domain, the central permuted GTPase domain, and a zinc knuckle-like C-terminal cysteine domain.	3.55772e-83
NC_013521.1|WP_081447923.1|1084357_1086520_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NC_013521.1|WP_012865979.1|1109491_1110532_+|HlyC/CorC-family-transporter	gnl|CDD|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	6.92093e-78
NC_013521.1|WP_012865976.1|1105993_1107142_-|HAMP-domain-containing-protein	gnl|CDD|182539	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS.	4.52696e-57
NC_013521.1|WP_012865970.1|1096888_1097977_+|PilT/PilU-family-type-4a-pilus-ATPase	gnl|CDD|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	1.15366e-154
NC_013521.1|WP_012865975.1|1104993_1105953_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	2.47329e-89

Protein sequences

>NC_013521.1|WP_042438621.1|1096293_1096506_+|mycothiol-system-anti-sigma-R-factor
MKHLFEFLDSEMTASDAEKMRVHVAECSPCLAELGIDEMVKRLLRRSCTEQAPEHLRVRIHSQITLLSEG
>NC_013521.1|WP_081447924.1|1095628_1096267_+|sigma-70-family-RNA-polymerase-sigma-factor
MTDDTNRAPEAEGDAERTRRFERDALAHLDQLYSAALRMTRNPSDAEDLVQETFAKAFAAFHQYRPDTNLKAWLYRILTNTFINTYRKKQREPLQSAAEDVEDWQIARAASHTSTGLRSAEAEALDRLPDSDVKRALQEIPEDRRIAVYLADVEGFPYKEIAEIMGTPIGTVMSRLHRGRGQLRGLLNDYAADRGFSGADRTKSTTGTKGER
>NC_013521.1|WP_012865967.1|1094735_1095314_-|DoxX-family-membrane-protein
MLLRKIARPLLATWFVHDGLDALRHPAAHAVTARGPADKVTAALGQQPLSESQLKSAVRAHGALTVAAGLSMATGRAPRRSALLLAALTLPVAVADEPFTSGPVSRSVRTERFVRRLGALGAALLAGVDTEGKPGMSWRLDHARDKHAAVKAAKETTALRAARVAKVSKAATKAKTQASSATSRVVDAVTPD
>NC_013521.1|WP_012865966.1|1093260_1094607_-|3-phosphoshikimate-1-carboxyvinyltransferase
MTSTPGTPATSPAEHADLWAAPTLAPVAGQLDATVEVPGSKSLTNRYLVLAALADGPGTLRGALRSRDTDLMVDALRSLGATVTEGESPSEWHITPGTVSGDVTVDCGLAGTVMRFVPAVAALSGARVTLDGDEGARVRPMGPILDGLRGLGVRVDDGGRGLLPFTIQGAGSVRGGSVDVDASASSQFVSGLLLAAARFEQGLTLRHTGATLPSIPHIDMTVELLREAGVTVDASRPAIWQVSPGPVAARDVRVEPDLSNAGPFLAAALVAGGTVRVPGWPTTTTQPGAMMPELLTRMGGSAHLDGDVLTVTGTGEIHGIDVDLHAAGELAPTIAALAAIAGSPSRLRGIAHLRGHETDRLAALATEITRLGGQAEQTSDGLVITPRPLHGGVFETYHDHRMATAGAIIGLRVPGVQVQDVGTTAKTLPGFTDLWSGMLAPASDGTGA
>NC_013521.1|WP_012865965.1|1092220_1093255_-|ribosome-small-subunit-dependent-GTPase-A
MGRRPIDESDFHSRPSKRGSRPRTKTRPEHEDAVSGLVTGVDRGRYTLLVDEDQPDEHVVTAMKARELTRQRVVCGDRVDVVGDTTGEEGSLARIVRITERATVLRRTADDTDPYERIIVANADQLVIVTALADPEPRTRMIDRCVVAAYDAGMDVLLCLTKADLASPDALRSLYEPIGVSVVTTSRGDEGEITPLEAVRDSLSGRTSVFVGHSGVGKSTLVNALVPGARRTTGVVNDVTGRGRQTSTSAVALRLPEHDGARGWVIDTPGVRSFGLAHVQIEHLLTAFDDLDEVAQECPRGCTHLEGSPDCALDEWVAASPDDEVRAARAARLDSFRRLLVSRA
>NC_013521.1|WP_012865964.1|1091361_1092162_-|histidinol-phosphatase
MIARPHYDDDLRLALVIADQVDAQTMARFKALDLHVESKPDHTPVTDADRSAEEIIRGQLSRSRGRDAVLGEEFGATGHGSRRWIVDPIDGTKNFVRGVPVWATLIALAEGDEIVVGVVSAPALGRRWWAAQGTGAWTGRSLSSATRLQVSGVRDIADASMSYSSLSGWEERGRLPHFLDLSRQTWRTRAYGDFWSYMLVAEGAVDIAVEPELELYDMAALVPIVTEAGGRFTSLAGVDGPFGGNAAVTNGHLHDHVLATVGFGAH
>NC_013521.1|WP_012865963.1|1090743_1091232_+|hypothetical-protein
MRLYVPVTLAELDALTGPTLTLESRGAHAATPQLVAELAAEGVDDLEEVEFVAQLAAADDSLVLVAADPAVPWLRAVVSVDVPDVSVRVLAADGASDDELAPSAVHVDGPLTGVRIVCAHVDEPEAASDIQAVMGGDDDAIERLADRDLLWYDATELSAIPR
>NC_013521.1|WP_012865962.1|1089812_1090355_-|hypothetical-protein
MTALAPAAEIPDRQTPRQPQTPTEHRQGAGGEQAEGVPPPRQRDPRREDDALVATGQQKTRDGAPTAPGDPTAICCAVAHAATEVLRGIRPIAQLVRSVSPEVYEQLEARLQVSTAARDRRGAPPTPQSRSRVRRARVVRVGADAAEAGVVVDDVDRVRAIALRVELHRGRWRAVVLEIG
>NC_013521.1|WP_012865961.1|1086662_1089458_+|preprotein-translocase-subunit-SecA
MAAILDKVLRFGEGRIVKKLSGLAKQVNALEDSFEALTDEELREETDRFKERIEQGATLDELLPEAFAAVREASRRTLGQRHFDVQLMGGAALHLGNIAEMKTGEGKTLVATLPAYLNALSGEGVHVVTVNDYLAKYQSEIMGRVFRFLGLSTGCILSGQTPAERREQYAKDITYGTNNEFGFDYLRDNMAWSTDDLVQRGHNFAVVDEVDSILIDEARTPLIISGPASGDTNKWYGEFARVVRRLTVDEDYEVDEKKRTVGVLEPGIAKVEDYLGIDNLYESLNTPLIGFLNNAIKAKELFKRDKDYVVIKGEVLIVDEHTGRILAGRRYNEGMHQAIEAKEGVAIKAENQTLATITLQNYFRLYSKLGGMTGTADTEAAEFQGTYKLGVVPIPTNRIMQRIDQPDLIYKSENAKFDAVVEDIVERHAAGQPVLVGTTSVEKSELLASKLKKQGVPHEVLNAKQHEREASIVALAGRKGAVTVATNMAGRGTDIMLGGNAEFLAIADLKTRGLDAAETPEEYEAAWPDALEAAKKAVADEHDEVAELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSTQDDLMRLFGSALAESMMQRFPDDMPLESKIVTRGIASAQGQVESRNFEIRKNVLKYDDVLSRQRSVIYDERRRVLDGEDMAEQIQHFLKDVLTAYVAGATAAGHPDSWDLDGLWTALKAVYPVSITVEEVVQQAGGVDALTHDLILAEVLSDAQHAYTSRETELGESNMRQLERRVVLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFLLFQAMTEAIKEESVGYLFNLEVKVETAPVVTAAGAAAAAGTAAAQALGAAGAAAADTQPAEEGEQVLVAKGLDGPDRQVPLSYTAPSEDGDGAVVTGANGATTAVAAGDDAAGNREERRKAKKKK
>NC_013521.1|WP_081447923.1|1084357_1086520_+|ATP-binding-cassette-domain-containing-protein
MARRSEKKSAAAAGQQRAATTVVDGADGAEGVDDLEPEYVPTEMDGDMFGGAPAKKAQHFWPSAKRLVGLLAPERVRMSVVVALVVVSVVLTVIAPRILGRAMDTIFNGVLGARLPEGVPLESVVADARAEGNDQFADLLSNADIVPGQGIDFDRLGRLILVVLALYVVASILSWAQGYILNGLVMRVVYRLRQDIEDKINRLPLSYFDTRQRGDLMSRVTNDVDNIQAALQQAFSQLVQSVLTVLGITAMMFIVSWQLALIALIALPLSGVIAGVIGTRSQKLFAAQWKNTGSLNGHVEETYSGLELVRSFGRDEEMLEEFDERNEKLYQASFGAQFVSGMIMPAMTFVSYLSYVLIAVVGGLRVASGQITLGDATAFIQYSREFSQPLGQIAGMANMLQSGVASAERTFELLDADEQDPERATATLPERTEGLVQLEDVSFSYDPTTPLIEHLSFSAQPGHTVAIVGPTGAGKTTLVNLIMRFYELTGGRILLDGVDITALSRGELRSQVGMVLQDAWLFEGTIRENIRYGRLDATDDEVVAAAEATMVDRFVRQLPDGYDTVLDADGGSVSAGERQLLTIARAFIANPSLLILDEATSSVDTRTELLVQHAMAALRTDRTSFVIAHRLSTIRDADTILVMEDGRIVETGTHDGLLEQGGAYYRLYMTQFRGEHTAEDEGDAHGADSGDGGDGSSGSTGSTVSAGAAPVDVERPSDAV
>NC_013521.1|WP_012865970.1|1096888_1097977_+|PilT/PilU-family-type-4a-pilus-ATPase
MSEPRQSVIPLLHALASTGASDLHCKVGSSPRVRVDGRLRRLQVAPLEPADTLAMLAEVLPDSFLTDFERNHEADFAYQLDGVGRFRVNAYQARGHVGLVLRRVTEGTVSLSELGLPEVVGELALEPRGLVLVTGPTGSGKTTTLASMVDLINTLREVNIISIEDPIEVLHEDKKAIISQREVRHDTNDFGSALRAAMRQDPDVILVGEMRDAETVRAALAAAETGHLVMSTLHTIDAQETINRVVDFFPPHEQTQVRSALSQSLRGVVSQRLVRRADSAGRRVVCEVMVNTGRTAEAIVDPGNNPPLLDLIADGGYYKMQTFDQHLFDLVRDGVVSYEDACAVSTNPQDLTVELRGAGLIG
>NC_013521.1|WP_012865971.1|1098163_1099018_+|DUF4097-family-beta-strand-repeat-protein
MRNETWVIAAPRTLTTSVVANAADAAAAFGEQPGAGDGPITRVVVALTGGTVRVEAHDRADVELDVTALSDRPVVARLEGETFSVSYDFSGVEGLVDRFKSVSAKDSADVVVRVPRAATVKVTTVRSDVSVQDVEASVSVTTASGSAEAVGISGPLSLTTASGRAAVTRHAGRATVRTVSGSAHVAGTLTRVDAQTVSGDVALELAGASGQVTTKTVSGRISVRVAPETGIDLRARTVTGTASFDGERIKGESRTAQITRDEPGATLFVDASTVSGDITVSHTL
>NC_013521.1|WP_081447925.1|1099165_1099876_-|lysophospholipase
MGRAGPTDARHPRRPTSSHAVPQTERPGAPVTSPGQDQLRICVVGDELAAGVGDPKGLGWLGRVTARTHAPALTMVFPLVVPGETTTALSARWEGEFNRRATGAPEVDHRLVIALGRADVDADLSVARSRLNLANMLDVADSRRVPAFVVGPPPGADADRERLAELSSAFGDVANRRRVPYVDTFTPLVDHEQWLGDLAANGTPYPGQAGYGLMAWLVLHTGWYRWLGLPDDDQTA
>NC_013521.1|WP_042437780.1|1099971_1103859_-|multifunctional-oxoglutarate-decarboxylase/oxoglutarate-dehydrogenase-thiamine-pyrophosphate-binding-subunit/dihydrolipoyllysine-residue-succinyltransferase-subunit
MSSNAESESISAVSAIFGANEWLVDELYEQFLADKNAVDPAWWEFFESYTPGETSPDTSSLSTPEAAATSKPAAPSGPAAQAKDASTAAASAPEPESASPAPAEKASAAAAAPRAHGEQAARQAQKVQKAAESQEAAVHADSPTQPPVATAQPATAPYAEVAKARTSPSSPSGEDDVQKLRGPAARVVSNMEASLTVPTATSVRAIPAKLMVDNRIVINNHLVRGRGGKVSFTHLIGFALVEALKEMPSMNAAYALVDGKPSVIRPAHVNFGLAIDLPKPDGTRQLLVPSIKAAETMDFAQFWAAYEDIVRRARNNKLTVEDHQGATISLTNPGTIGTVHSVPRLVTGQGAIIGVGAMDYPAEFAGASLEQLSKMAISKVLTITSTYDHRIIQGAASGDFLRILGIKLLGEDGFYDRVFTSLRVPYEPVRWVRDNTVDADAEAAKPARIAELIHSYRSRGHLMADTDPLAYRQRKHPDLDVQTHGLTLWDLDRVFPVNGFGPKPKATLRDVLGLLRDSYCRTIGAEYMHLADRTQRKWLQERLEAGYERTPREEQLRILRRLNSAEAFETFLQTKFVGQKRFSLEGGESVIALLDGVLSGAADAGLDEVCIGMAHRGRLNVLANIAGKSYAQIFSEFEGNQDPRTVQGSGDVKYHLGTEGTFTSESGATTKVYLAANPSHLEAVDPVLEGIVRAKQDRIDLGGDGFSVLPILIHGDAAFAGQGVVTEVLNLAQLRGYRTGGTIHVVINNQVGFTTGPSSSRSTLYCTDVAKGLQVPIFHVNGDDPEAVVRVAQLAFEFREQFDRDVIIDMVCYRRRGHNEGDDPSMTQPLMYNLIEAKRSVRKLYTENLVARGDISVEEAEQVLADYQAQLERVFTETREGGYTPPANSDPVAGLERPESQREDAGTMVGWKTATDQAVLDRIGQAHATPPEGFTVHPKLAQLLEKRAAMSSEGGIDWGYGEILAFGSLLMEGTPIRLAGQDSRRGTFVQRHAVMHDRETGAEWTPLLYLSGDQAKLWVYDSSLSEFAALGFEYGYSVERPDALVLWEAQFGDFVNGAQTIIDEFISSAEQKWGQNSSVVLLLPHGYEGQGPDHSSARVERFLQLCAEDNLTVAFPSTPASYFHLLRRQAYDRPRRPLVVMTPKSMLRLKAAASPTEDFTSGTFREIIRDDLAEAQASKVDRVLLCSGKVYYDLIAHRVKSGDTSTAIVRLEQLYPLEGEMLTEAVAAFGDAELVWVQDEPENQGAWPFIALNAPEALGREMRVVSRSASASPAAGSAKKHLAEQTDLVERAFAR
>NC_013521.1|WP_012865974.1|1104178_1104997_-|ABC-transporter-permease
MNVALRSEYRKLVTTRVWWVLLLAMAAYMAFIGVLLGWSLAAGSADVGGVGGVGGADLTSPDSIRGSVYGTATAFGYVFPVVVGALSMTGEYRHGTITPTFLASPSRTRVLVAKMLASLPVGALYGTVATLAVVGAGAAGLALGGAPTLLGDAETWTLVARSVLALTVWAPVGVALGSIVTNQVLAVIAILVWTQFLEAVLRLGLAQAGDVGTTVASYLPGAAGESITGGSFFSAAGVADTLPWGVGLAVLVGYALVLATIGARTTLRRDVA
>NC_013521.1|WP_012865975.1|1104993_1105953_-|ATP-binding-cassette-domain-containing-protein
MPTPHTADHPLPTTPAPPGTVSLRGLTKRFGAVTAVDDLTVDVLPGRVTGFLGPNGAGKTTTLRMLLGLVSSTSGSATISGLRYSQISDPLREVGAALEATSFHPGRSGLDHLRTYAPYAGADDARCHELLEQVGLQPAGRRRVGGYSLGMRQRLALATTLLGDPQVLLLDEPANGLDPEGIRWLRGFLRHLAAQGKTVLVSSHMLSEVQQSVDDVVIIARGRLVHSSSMAELGALAAPRVAVASPDADGLARLVADQGWHVSGVAPDGRTLEVDHVSTAQVGAAAFASGVELHTLADRTDSLEDLFLRLTQTTTGAAA
>NC_013521.1|WP_012865976.1|1105993_1107142_-|HAMP-domain-containing-protein
MSSPRTVRPLRPHLPDVRPLDRFKTLKIKMAIVVAASVTLAAFVTWLGLRHDLGPTRTFPLAVLASMLFTMVVARGMTSPLREMTAAARSMSEGDYSRRVQATSRDEVGQLATAFNIMAEDLDSSDRVRRELIANVSHELRTPVAALHAQLENLVDGVVEPTPATMQTALTQTERLTRLIAYLLDLSRVEAGAADLNLTEVVALDFLEDTVSSVSTIEAGKQLAFFVEVEPEDATFTADPERLRQILVNLLHNAIRHSPFMGEVSILARRTADEIVFDVSDNGPGVAVEDRQRIFERFARGGTGPNGAPTAGGTGSGGTGIGLAIVRWAVDLHGGTVEVADTLAGATMRVALPQPPESGAHGPQDGAADDGTDSTGDVVGLR
>NC_013521.1|WP_012865977.1|1107158_1107893_-|response-regulator-transcription-factor
MSAISPRPDSPSAGASILIVEDEPAIATAIAQRLGAEGWRTEVARDGLSGVEAAARMLPDAVVLDVMLPGIDGLEVCRRIQAERPVPILMLTARDDETDMLIGLGVGADDYMTKPFSMRELVARLKALLRRVDRAAQASSAPDGAEPPMVIGDVVIDRAQRRVHRAEQEIHLTPTEFELLVMLASSPKTVQTRERLLAEVWDWADASGTRTVDSHIKALRRKLGADLIRTVHGVGYAFEPPASA
>NC_013521.1|WP_012865978.1|1108163_1109495_+|HlyC/CorC-family-transporter
MTDWLFIGLGVLLTIGTAVFVASEFSLVTLDPAVVGSDDDDEEDSPDWRGRSVRGAVKHLSTELSSAQVGITITTILLGYTAQPAIANLVGGPLESTALSATVAGVLAVTVSLLLVNFFSMLFGELIPKNYALSRPLPTARQVVPVQRVFTRLLRPVIAALNGSANAILRRVGVEPKEELSGARSAPELAALVRRSAQVGTLDVSTARLITNAVELDELTAVDVMTDRMRVAVVAREDTANEVIELARRTGHSRFPVIDASRDDIVGLVHLRRAVAVPRERRDHVPAVALMDEAPRVPETVRLGPLLVELRSFGMQMAVVVDEYGGTSGVVTFEDVVEELVGEVSDEHDARRAGALLASDGSWVVPGLLRPDELEERTTLRVPEGPDYETLGGLVMARLGRVPVVGDEVRIDAEYEGATITATVEEMDGRRVDRLRLRTGDTA
>NC_013521.1|WP_012865979.1|1109491_1110532_+|HlyC/CorC-family-transporter
MSSGLALTIGVLLLAANAFFVGAEFAIISARRSAIEPLALAGNKRAKTVLWAMEHVSLMLACAQLGVTVCSTGLGVIAEPALAHLIEGPLEALGVSSALVHPISFVLALAVVVYLHVVLGEMVPKNLSVSGPDKAVLWFGPPLVIIGRVLRPVIVALNWLANHAVRLTGVEPKDEVASAFTAEEVQSILEHSQAQGSLVDEQGLLAGAIEFSERTAADVMVPLDGLVTLAEGCTPDEVERLVARTGYSRFPVADPGGDLIGYLHLKDVLFATDDQRDVPLQVWRTRALAEASPGDEVEAVLRAMQRSGAHLARVWDGERVLGVVFLEDILEELVGEVRDAMQREAR

Crispr_ID: NC_013521_3

• CRISPR_ID: NC_013521_3
• CRISPR_location: 2612416-2612519
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_013521_3

Consensus_repeat	Method
GGCATGCCCTGGCTCGTCGCGAAGGGGTTGTT	CRISPRCasFinder

spacers of NC_013521_3

>3.1|2612448|40|NC_013521|CRISPRCasFinder
CCCCGGGCGGGGCGTGCCGGAGCGCGGCTTGTCAGAACGC

CRISPR arrays and Neighbor proteins around NC_013521_3

CRISPR arrays

The CRISPR arrays of NC_013521_3

>merge|NC_013521|3|2612416-2612519|CRISPRCasFinder
GGCATGCCCTGGCTCGTCGCGAAGGGGTTGTTCCCCGGGCGGGGCGTGCCGGAGCGCGGCTTGTCAGAACGCGGCATCCCCTGGCTCGTCGCGAAGGGGTTGTT

>NC_013521|3|3|2612416-2612519|CRISPRCasFinder
GGCATGCCCTGGCTCGTCGCGAAGGGGTTGTT	CCCCGGGCGGGGCGTGCCGGAGCGCGGCTTGTCAGAACGC
GGCATCCCCTGGCTCGTCGCGAAGGGGTTGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013521.1|WP_012867324.1|2605036_2606638_-|hypothetical-protein	unknown	unknown	unknown
NC_013521.1|WP_143755995.1|2618470_2619277_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379120
NC_013521.1|WP_012867322.1|2602167_2604375_-|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl|CDD|131743
NC_013521.1|WP_012867328.1|2609530_2609995_-|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl|CDD|234787
NC_013521.1|WP_012867320.1|2600332_2600779_+|hypothetical-protein	unknown	unknown	gnl|CDD|371616
NC_013521.1|WP_012867338.1|2622114_2623302_-|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl|CDD|235472
NC_013521.1|WP_012867334.1|2616640_2618416_-|proline--tRNA-ligase	unknown	unknown	gnl|CDD|236405
NC_013521.1|WP_012867339.1|2623291_2623843_-|DivIVA-domain-containing-protein	unknown	unknown	gnl|CDD|188337
NC_013521.1|WP_143755720.1|2606641_2607328_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224054
NC_013521.1|WP_042439129.1|2599500_2600217_-|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl|CDD|234595
NC_013521.1|WP_012867332.1|2614592_2615138_-|ribosome-maturation-factor-RimP	unknown	unknown	gnl|CDD|234627
NC_013521.1|WP_012867331.1|2613493_2614591_-|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl|CDD|237061
NC_013521.1|WP_012867323.1|2604598_2604868_-|30S-ribosomal-protein-S15	unknown	unknown	gnl|CDD|180170
NC_013521.1|WP_169310146.1|2613075_2613372_-|DUF448-domain-containing-protein	unknown	unknown	gnl|CDD|377288
NC_013521.1|WP_012867326.1|2607346_2608336_-|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl|CDD|235536
NC_013521.1|WP_012867321.1|2600840_2602166_-|insulinase-family-protein	unknown	unknown	gnl|CDD|223685
NC_013521.1|WP_012867337.1|2620680_2621997_-|site-2-protease-family-protein	unknown	unknown	gnl|CDD|100084
NC_013521.1|WP_012867327.1|2608476_2609508_-|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl|CDD|235113
NC_013521.1|WP_012867336.1|2619440_2620574_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl|CDD|234737
NC_013521.1|WP_143755721.1|2615329_2616532_+|DUF4439-domain-containing-protein	unknown	unknown	gnl|CDD|373114

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013521.1|WP_143755995.1|2618470_2619277_-|GNAT-family-N-acetyltransferase	gnl|CDD|379120	pfam13312, DUF4081, Domain of unknown function (DUF4081). This domain is often found N-terminal to the GNAT acetyltransferase domain, pfam00583 and FR47, pfam08445.	1.06043e-41
NC_013521.1|WP_012867322.1|2602167_2604375_-|polyribonucleotide-nucleotidyltransferase	gnl|CDD|131743	TIGR02696, polyribonucleotide_nucleotidyltransferase, guanosine pentaphosphate synthetase I/polynucleotide phosphorylase. Sohlberg, et al. present characterization of two proteins from Streptomyces coelicolor. The protein in this family was shown to have poly(A) polymerase activity and may be responsible for polyadenylating RNA in this species. Reference 2 showed that a nearly identical plasmid-encoded protein from Streptomyces antibioticus is a bifunctional enzyme that acts also as a guanosine pentaphosphate synthetase.	0
NC_013521.1|WP_012867328.1|2609530_2609995_-|30S-ribosome-binding-factor-RbfA	gnl|CDD|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	5.23853e-45
NC_013521.1|WP_012867320.1|2600332_2600779_+|hypothetical-protein	gnl|CDD|371616	pfam11593, Med3, Mediator complex subunit 3 fungal. Mediator is a large complex of up to 33 proteins that is conserved from plants to fungi to humans - the number and representation of individual subunits varying with species. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Mediator subunit Hrs1/Med3 is a physical target for Cyc8-Tup1, a yeast transcriptional co-repressor.	0.00154958
NC_013521.1|WP_012867338.1|2622114_2623302_-|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl|CDD|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
NC_013521.1|WP_012867334.1|2616640_2618416_-|proline--tRNA-ligase	gnl|CDD|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NC_013521.1|WP_012867339.1|2623291_2623843_-|DivIVA-domain-containing-protein	gnl|CDD|188337	TIGR03543, divI1A_rptt_fam, DivIVA domain repeat protein. Members of this protein family contain two full and two partial repeats of a domain found at the N-terminus of Bacillus subtilis cell-division initiation protein DivIVA. The portion repeated four times in these proteins includes the motif GYxxxxVD.	4.73447e-51
NC_013521.1|WP_143755720.1|2606641_2607328_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	9.71963e-44
NC_013521.1|WP_042439129.1|2599500_2600217_-|4-hydroxy-tetrahydrodipicolinate-reductase	gnl|CDD|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	1.0309e-79
NC_013521.1|WP_012867332.1|2614592_2615138_-|ribosome-maturation-factor-RimP	gnl|CDD|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	2.67609e-31
NC_013521.1|WP_012867331.1|2613493_2614591_-|transcription-termination/antitermination-protein-NusA	gnl|CDD|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	0
NC_013521.1|WP_012867323.1|2604598_2604868_-|30S-ribosomal-protein-S15	gnl|CDD|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	8.48948e-51
NC_013521.1|WP_169310146.1|2613075_2613372_-|DUF448-domain-containing-protein	gnl|CDD|377288	pfam04296, DUF448, Protein of unknown function (DUF448).	7.63942e-20
NC_013521.1|WP_012867326.1|2607346_2608336_-|bifunctional-riboflavin-kinase/FAD-synthetase	gnl|CDD|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.50236e-124
NC_013521.1|WP_012867321.1|2600840_2602166_-|insulinase-family-protein	gnl|CDD|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.50204e-105
NC_013521.1|WP_012867337.1|2620680_2621997_-|site-2-protease-family-protein	gnl|CDD|100084	cd06163, S2P-M50_PDZ_RseP-like, RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. In Escherichia coli, the S2P homolog RseP is involved in the sigmaE pathway of extracytoplasmic stress responses. Also included in this group are such homologs as Bacillus subtilis YluC, Mycobacterium tuberculosis Rv2869c S2P, and Bordetella bronchiseptica HurP. Rv2869c S2P appears to have a role in the regulation of prokaryotic lipid biosynthesis and membrane composition and YluC of Bacillus has a role in transducing membrane stress. This group includes bacterial and eukaryotic S2P/M50s homologs with either one or two PDZ domains present. PDZ domains are believed to have a regulatory role. The RseP PDZ domain is required for the inhibitory reaction that prevents cleavage of its substrate, RseA.	2.02145e-44
NC_013521.1|WP_012867327.1|2608476_2609508_-|tRNA-pseudouridine(55)-synthase-TruB	gnl|CDD|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	1.41587e-147
NC_013521.1|WP_012867336.1|2619440_2620574_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl|CDD|234737	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.	0
NC_013521.1|WP_143755721.1|2615329_2616532_+|DUF4439-domain-containing-protein	gnl|CDD|373114	pfam14530, DUF4439, Domain of unknown function (DUF4439). This domain has a ferritin-like fold.	1.53511e-23

Protein sequences

>NC_013521.1|WP_012867328.1|2609530_2609995_-|30S-ribosome-binding-factor-RbfA
MVDHPRARKLADRIQVIVAQMLDTRIKDPRLGFVTVTDVRVTGDLQNASVFYTVMGDEESRAGTAAALESAKGMIRSEVGKQTGIRLTPTLEFHLDSVPEIAEKFGEALLEARRRDAELVALRENATYAGDEDPYKHGEDEDGEGDVPAPAPTA
>NC_013521.1|WP_012867327.1|2608476_2609508_-|tRNA-pseudouridine(55)-synthase-TruB
MTHETPTTGPRARADRPVRPRRPTAPDGLVLVDKPAGWTSHDVVARTRGLAGTRKVGHAGTLDPMATGVLVLGVGRATRLLTYVVGTDKEYTATIRLGQATTTDDAEGEMLTTPGAAGVAADAVAAGIARLTGEIQQVPSSVSAIKVDGKRAYALVRSGADVALDARTVTISRFDVHAVREVEVTVEGDSEAGTATTTTTVLDVDVTVVCSSGTYIRALARDLGADLGVGGHLTALRRTRVGGYTLDAARSFEELESQADADGTLATLPLADAARGTFPVRVLTAEEVVALSYGQWLEPTGASGTTAALSPEDELVALVEDVTRSGHVKAKPVIVFAPSQAST
>NC_013521.1|WP_012867326.1|2607346_2608336_-|bifunctional-riboflavin-kinase/FAD-synthetase
MQLWTDLDQIPAGVGPSVVTIGNFDGVHAGHVEVLGRLVQRAAELEAVSVAITFDPHPAQVHRPDEAPPLITGLQDRLLLLEETGIDAVLVLPYSLALAGLTPEEFVSRYIVDALGAVCVAVGRDVRFGLGNSGSLETMVSLGERYGFVVDVIQDVGDGPAPRWSSSAVRELLLAGDVAGAAQILGRPHRLRGEVVHGDARGRDLGFPTANLSQDAQGIVPADGVYAGWVRRPTSADPTPLPAAISIGTNPTFDGLQRRVEAYVLDRTDLDLYGEEILVELVERLRPTLRFDGLDALVEQMTADVVQARDILLPVAPATDGSGTGTTEG
>NC_013521.1|WP_143755720.1|2606641_2607328_-|ATP-binding-cassette-domain-containing-protein
MGDVVVETSGLEVGYGDVRVCAPVDLVLRRGESLAVIGANGSGKSTVLRTVLGLLPPLGGQVEVLGREVDERDRRFRAAVAGVLDADAYFPGLTTREHLVLTARGFGVAEAGRVVDEVLEVVGIAHQGDTLPDALSSGQRRRLLLASGFVRPRELLVLDEPEQRLDVRMRRTLARLLRDETARGGAVLYATHDETLLRETGSPALLVAEEESRVLSSAEACELLAAGL
>NC_013521.1|WP_012867324.1|2605036_2606638_-|hypothetical-protein
MHPLVTDPSEQLSGRELRRLTARAAAARSGSGAAEVLSTVASAVVCTAVVVGLVVGAADAVRGVLTLPGAGDAAAPVLSLGVVRLLLWAAVAALAGSLAARLGPVGVSDAGLRWWVPTAVDRSGLLVGSWWAALGAWAVGTSVAATLVAVVTGMPPTLGTLGAVSLLGAATGALVVASVGLLQAGGRGRPAQRVADGLVALVPLLGAVAVVVGGVRPDLDVPAAADRAGGAAGLDALSPPVALVVTLLVAASALVAAVVWRRTLGRVEASVLAERAGTAQHVGASALSLDTRELARALGRGRPGRPRRASRRLRLARGPASALLHSEVLALVRAPGVLLGTAALAGAAVVAQQVPALGSGGGLVVVAAVVGLRAAQAGARGAAEADVVPALDAMLPLGSRSTRLVRTVVPALTSAVVVVTSLAAAVRGLDGALWSWVLLLALAGAGFGAAAVRGAYRKPPDWSAPLLATPAGALPTGAVVSAARGPDLALLVVVPVGVALVAGTVTPVLLVAQTLVAVVAVLVASSVPATDQR
>NC_013521.1|WP_012867323.1|2604598_2604868_-|30S-ribosomal-protein-S15
MPLDTATKQRIMTEFATTEGDTGSPEVQVAMLTQRILDLTEHLKEHKHDHHSRRGLLLLVGKRRRLLGYLQKVDIERYRTLIGRLGLRR
>NC_013521.1|WP_012867322.1|2602167_2604375_-|polyribonucleotide-nucleotidyltransferase
MEGPEIEFEEAVIDNGRFGTRTVRFETGRLARQAAGSAAAYLDGETMLLSATTVGKHPKDQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILTCRLIDRPLRPTFVKGLRNEVQVVVTVLAAHPDDAYDTLAINVASLSTQLSGLPFSGPVGAVRIALVDGQWVAFPKYSDKEKAVFDMVVAGRVAGDDVAIMMVEAEATDNSWTLIKDEGVAAPTEEVVAEGLEASKVFIRQLCEAQAALAARAAKPVREFPLFLDYQDDAYAAIEAQVATPLGQALTIADKQDRENRLDEIKAEALEALAGQFEGREKELSAAVRSVTKKLIRQRVLTDGVRIDGRGLADIRTLSAEVEVVPRVHGSAIFERGETQIMGITTLNMLRMEQQIDSLGPETRKRYMHNYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTLSLLNAGVPLRAPVAGIAMGLISDTVDGKPRYAALTDILGAEDAFGDMDFKVAGTREFVTAIQLDTKLDGIPASVLGGALTQARDARFAILDVLGEAIDVPDEMSPHAPRVIAVKVPVDKIGEVIGPKGKMINQIQEETGADISIEDDGTVYIGATDGPSAEAARAAINAIANPHVPEVGERFVGTVVKIAPFGAFISLSPGKDGLLHISQIRKLVGGKRVENVEDVLSIGQKVQVEIGEVDPRGKLSLHAVVDEAEAGQADT
>NC_013521.1|WP_012867321.1|2600840_2602166_-|insulinase-family-protein
MPWNLPLDPAGSPANELTAGQDGATIRRSVLPGGVRVLTEHMPGLRSATLGAWVGVGSRDETSGHFGSTHFLEHLLFKGTQRRTAMDIAEAFDAVGGEANAATGKEHTCYYARVLDSDLPMAVDVITDMVTSARLDEAELETERGVILEELAMNDDDPADVVHEEFAAAVLAGHALGRPIGGTPDTIRAVPRAAVWEHYQWHYRPETLVISAAGGVDHDALCAQVAQALTDGGWDLAAGASPRARRDSADITGVGEVGTELTVRRSVEQGNVIIGSTGLSATDDRRFVMSVLSAVLGGGMSSRLFQEIREKRGLAYSTYSFASGHGGIGTFGLYAGCAPAKIDEVSELMVVELEKLADSGITTSELARSIGQLSGGLVLGLEDSGSRMSRLGKADLVTGELLSVAESLERIRSVTAEEVQALAKDLADRPRSTVRVGPFGD
>NC_013521.1|WP_012867320.1|2600332_2600779_+|hypothetical-protein
MRTSHHDTSAADSRLERDLRRNVAVAAWGLALAVAAGALLLAPGAPQAPSTSLAAGMTAVVAVGIGVTGTAARGLVSTSILSMLLTEPTALQLQAQAQAQAQAQAQAQAQAQAEHAAQDSPETRAADPLRPVERPWEHSAAAVGSAPL
>NC_013521.1|WP_042439129.1|2599500_2600217_-|4-hydroxy-tetrahydrodipicolinate-reductase
MGRAVCAAVDAAPDLELVATVRAGDDLASSLDGVDVAVDFTVPSVTEGNVRTLVDVGVHAVVGTTGWTDESRGRIRDQLAARAADGVSVGVLIAPNFGLSAVLAMTFAAKAARFFESVEVVELHHPDKIDAPSGTARHTAAAIAAARREAGVAPSPDATETGLEARGVDVDGVRVHAVRLRGLVAHEEILLGNEGEQLVIRQDSFDRVSFMPGVLLAIREVVTRPGLTVGLENVLDLS
>NC_013521.1|WP_169310146.1|2613075_2613372_-|DUF448-domain-containing-protein
MRTCVGCRQRDAQSQMIRFVMSRGDEDGASPGVVADPRRVRSGRGAWLHDDAGCAERAIARKAFQRALRVPHDIAINGLTIPVDPCPPGARHVDKEAG
>NC_013521.1|WP_012867331.1|2613493_2614591_-|transcription-termination/antitermination-protein-NusA
MDIDMSALRLLEREREISLDVLVSAIEQALALAYQRTPGAQRTARVEIDRKSGHVTVWAREDIETEEPVEPRYSDGDDADGTEDDEAPTTRVVRTLGPEFDDTPTDFGRIATSTARQVIMQRLRDAEDDQVLGQFRDKEGELVSGIIQQGRDPRVVLVDVGGTEAVLGAHEQVPTEKYTHGERLRSYVLDVSRGMKGPQISLSRTHPNLVRKLFEMEVPEVADGSVEIVAIAREAGHRTKMAVRARVSGLNAKGACIGPMGSRVRAVMAELHDEKIDIVDWNDDPAAFVASALSPATVISVTVVDADARAARVIVPDFQLSLAIGKEGQNARLAAKLTGWRIDIRSDGGGAEGSDDASTTSSDPR
>NC_013521.1|WP_012867332.1|2614592_2615138_-|ribosome-maturation-factor-RimP
MAASPIAEQVADAVRPGVESAGLVLEDVQVAPAGARTVVRVVLDLTEDQTGALGLDQVAEVSRVISDTLDTLPALPGKFTLEVTSPGTSRPLTELRHFKRARTRLVAVTLVEGAPFTERLTSVEDEVLVFEGADGAPHEVPFAAVSSGQVEVELKRAASVDESDFEDFDGSEDTDRTDGEG
>NC_013521.1|WP_143755721.1|2615329_2616532_+|DUF4439-domain-containing-protein
MASSGAMNTAADIQPPPAVDAASGHPRPAPRRRRARTLLTVIISTVLALATVAGCGIRLESPAPAALVPDADEISRQAAVADVLLVGPEARLTIPTVDPASPVVALLEEIDASATAQAEALGGEYVSGVEGEGGDPAGTSSHDAADGQTALAPGSVTDDEGTIDPSVAASPTDEPTGSTTTDPAPSVPRLLTVLTQSADRTRASIGTPRDPALARLYASVATSHLDQARSLAALSGLDAPAPESFTTTLPTTLPKNLSAADLVTVVRAEDAAGYAYEVMAARLADGDRTAARDRAAEHRERAQGWAVLASLDGAATDPREVAYDLGTIADGTPTLASRDSMVTRAAEIEADLADAYATFVGQVDADARSSMLDLLADAHLSSRSWGAPASTFPGMPELAG
>NC_013521.1|WP_012867334.1|2616640_2618416_-|proline--tRNA-ligase
MLLRLSTLFVRTLREDPADAEVASHRLLVRAGYIRRAAPGIYTWLPLGLRVLAKVEAVVREEMQAAGAQEVHFPALLPREPYEATGRWTEYGPNLFRLKDRRDNDYLLAPTHEEMFTLLVKDLYSSYKDLPVTLFQVQTKYRDEARPRAGLIRGREFVMKDAYSFDVDDAGLEASYLVQRAAYEKIFTRLGLEYVVVAATSGAMGGSRSEEFLHPTAIGEDTFVRSPGGYAANVEAVTTIVPPEVDASDAPAAHVEATPDTPTIESLVAVANAEHPRSDGRAWTAADTLKNVVLAVVQPDGTRELLVVGLPGDREVDLKRLEAALAPAEAEPAGDGDFAKNPVLVKGYIGPQVLGRAHTGDETAIRYLVDPRVVAGTRWITGANEPGKHVFDLVAGRDFVADGTVECAEVRAGDPAPDGSGPLELARGIEIGHIFQLGRKYADALGLKVLDVNGKQVTVTMGSYGIGVTRALAALAEANHDEKGLAWPAHVAPAHVHVVATGKDPAVFAAAETIAQELSAQRVEVLYDDRPKVSPGVKFADAELLGVPLVVVVGRGLADGVVEVRPRVGGEAVSVPVAEAAQRVVEMVEAL
>NC_013521.1|WP_143755995.1|2618470_2619277_-|GNAT-family-N-acetyltransferase
MMALCAVDPVGSVLAASRVEAALVDGFARTGGQAWGFPAQGPLVATCWAGANLVPVVPSPDTEVLDAFAAQARAQGRRCSSIVGPAVAALGLWRRLEADWGPARSVRTEQPSMVMQGELLVEPDPDVRTSTAEDMPDLLPACVRMFEEEVGYSPMTYSARAYEERVASLVHDRRSFLSRAHEPDGRIVFKAEIGALTRDVAQVQGVWVDPLDRGTGRAAPGMAAVVRHVLAAPGRTVSLYVNSFNERALATYRRVGFEQVGTYATVLF
>NC_013521.1|WP_012867336.1|2619440_2620574_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MPEAPPPVLAPRRPTRKIKVGKVDVGGDAPVSVQSMCTTPTTDINATLQQIAELTASGCDIVRVAVPSQDDALALPAIARKSQIPVIADIHFQPKYVYAAIDAGCAAVRVNPGNIRKFDDQVKQIANAARDAGVSIRIGVNAGSLDPRIMAKYGKATPEALVESAVWEASLFEEHDFHDFKISVKHNDPVVMVRAYELLSQAGDWPLHLGVTEAGPAFQGTIKSATAFGALLSQGIGDTIRVSLSAPPVEEVKVGIQILQSLNLRPRKLEIVSCPSCGRAQVDVYTLAEKVTAGLEGLEVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVVKTVPEALIVETLIEEAMRIAETMERPAEGGAPVVSVG
>NC_013521.1|WP_012867337.1|2620680_2621997_-|site-2-protease-family-protein
MSYLVGVLVILAGLLVSIALHEVGHMVPAKRFGVRVSQYMVGFGPTLWSRTRGETEYGLKAIPLGGYVRLVGMYPPGDPRAERKTGRIAELVQSARDASAEEIVPGEEHRAFYNLSAPKKLVVMLGGPFMNLVIAAVLFTVVVVGFGAFGPTTTLASVSQCVLPVGAPADAECTEGSELAPAAAAGLLPGDTIVEFGGVATTGWDELAAQISAAGGTPTEVVVERDGQRVESVVTPVVADRPTTDASGAAVLDSDGEPVTRSVGFLGISPTQGLEPQPVTVVPGMLWDRLVQTAQVIVTLPERMVDITQVAFGLEERDPTSVVGPVGVGRFAGEIASVQIDGYDTALRTADLIMMVAGLNIALFAFNLIPLLPLDGGHVVGALYEGARRQVARVRGRPRPAPADTARMMPLAYGVFVVMAAMGALIAYVDVVRPVQLM
>NC_013521.1|WP_012867338.1|2622114_2623302_-|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MSSSSVRSVTLLGSTGSIGTQAVDVLSRHRDRYRVTALSAGGAQPEMLAQQAVDLDVEVVAVSDEAAVPALRDHLSRLQTPGSRAIEVLSGPDAATTLAAGGSDVVLNGITGSVGLGPTLAALRSGSTLALANKESLVVGGPLVQAARVRPDQIVPVDSEHSAMAQSLRSGARHEVRRLVLTASGGPFRGWHRDDVKAVTVDQALDHPTWSMGPVVTINSATLVNKGLELIEAHLLFDVPVDDITVVVHPQSVVHSMVEFHDGSTIAQASPPDMRLPIALGLSWPERLDDVSTPCDWSRPVAWTFEPLDETLFGAVRLARQVAAAGATHPAVFNAANEECVAAFLEGRIGFLEIVETVERVVAEHESSSGVLTLDDVLAAETWARGRAREVLAER
>NC_013521.1|WP_012867339.1|2623291_2623843_-|DivIVA-domain-containing-protein
MTKMFSTVSRLRLGYEQEDVDDFFAHARQVYEGQSDEDLSSRDIRSAGFELARGGYDTDEVDAALDRLESAFVARARQEVLVTGGSAAWMEQLAENARSLYGRLGRPDGERFEPARRGQPAYDRDDVDDLCDRLVEYFDKTEPITADEIRRARFRRRSGRRGYAEAPVDAFFSRAVEVLLGVE

Crispr_ID: NC_013521_4

• CRISPR_ID: NC_013521_4
• CRISPR_location: 4114984-4115070
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csa3

Consensus repeat of NC_013521_4

Consensus_repeat	Method
CCACGACCACTCGGACGAGGCCAC	CRISPRCasFinder

spacers of NC_013521_4

>4.1|4115008|39|NC_013521|CRISPRCasFinder
GGACGCCACCACCGACGAGCACGACCACGAGGGTCACGA

CRISPR arrays and Neighbor proteins around NC_013521_4

CRISPR arrays

The CRISPR arrays of NC_013521_4

>merge|NC_013521|4|4114984-4115070|CRISPRCasFinder
CCACGACCACTCGGACGAGGCCACGGACGCCACCACCGACGAGCACGACCACGAGGGTCACGACCACGAGCACTCGGACGAGGCCAC

>NC_013521|4|4|4114984-4115070|CRISPRCasFinder
CCACGACCACTCGGACGAGGCCAC	GGACGCCACCACCGACGAGCACGACCACGAGGGTCACGA
CCACGAGCACTCGGACGAGGCCAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_013521.1|WP_081448042.1|4124728_4125811_+|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl|CDD|369882
NC_013521.1|WP_012868630.1|4110866_4111700_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|315383
NC_013521.1|WP_012868636.1|4116319_4116973_-|copper-resistance-protein-CopC	unknown	unknown	gnl|CDD|377255
NC_013521.1|WP_012868625.1|4106950_4107385_-|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|197713
NC_013521.1|WP_012868643.1|4123956_4124778_-|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223528
NC_013521.1|WP_012868640.1|4121082_4121733_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223836
NC_013521.1|WP_012868633.1|4112914_4113427_-|hypothetical-protein	unknown	unknown	unknown
NC_013521.1|WP_042439762.1|4108222_4109452_-|MFS-transporter	unknown	unknown	gnl|CDD|340863
NC_013521.1|WP_012868635.1|4115220_4116087_+|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|376518
NC_013521.1|WP_012868624.1|4106012_4106954_-|cation-transporter	unknown	unknown	gnl|CDD|224151
NC_013521.1|WP_012868638.1|4119193_4120144_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|130316
NC_013521.1|WP_012868642.1|4122897_4123671_-|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224051
NC_013521.1|WP_012868626.1|4107664_4108204_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NC_013521.1|WP_042439769.1|4117152_4119072_-|hypothetical-protein	unknown	unknown	gnl|CDD|223839
NC_013521.1|WP_012868641.1|4121890_4122763_-|glutamate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270408
NC_013521.1|WP_012868629.1|4110325_4110802_-|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NC_013521.1|WP_012868628.1|4109559_4110252_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|378968
NC_013521.1|WP_012868639.1|4120219_4121086_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223836
NC_013521.1|WP_012868632.1|4112315_4112825_-|hypothetical-protein	unknown	unknown	unknown
NC_013521.1|WP_012868631.1|4111775_4112279_+|redox-sensitive-transcriptional-activator-SoxR	unknown	unknown	gnl|CDD|133385

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_013521.1|WP_012868625.1|4106950_4107385_-|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	2.6e-20	67.7	0.3

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_013521.1|WP_081448042.1|4124728_4125811_+|SMP-30/gluconolactonase/LRE-family-protein	gnl|CDD|369882	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.	1.10771e-65
NC_013521.1|WP_012868630.1|4110866_4111700_+|alpha/beta-hydrolase	gnl|CDD|315383	pfam12695, Abhydrolase_5, Alpha/beta hydrolase family. This family contains a diverse range of alpha/beta hydrolase enzymes.	6.29702e-43
NC_013521.1|WP_012868636.1|4116319_4116973_-|copper-resistance-protein-CopC	gnl|CDD|377255	pfam04234, CopC, CopC domain. CopC is a bacterial blue copper protein that binds 1 atom of copper per protein molecule. Along with CopA, CopC mediates copper resistance by sequestration of copper in the periplasm.	1.3858e-18
NC_013521.1|WP_012868625.1|4106950_4107385_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	4.78261e-20
NC_013521.1|WP_012868643.1|4123956_4124778_-|NAD(P)-dependent-oxidoreductase	gnl|CDD|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	8.9507e-31
NC_013521.1|WP_012868640.1|4121082_4121733_-|amino-acid-ABC-transporter-permease	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.09244e-52
NC_013521.1|WP_042439762.1|4108222_4109452_-|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.90453e-35
NC_013521.1|WP_012868635.1|4115220_4116087_+|zinc-ABC-transporter-substrate-binding-protein	gnl|CDD|376518	pfam01297, ZnuA, Zinc-uptake complex component A periplasmic. ZnuA includes periplasmic solute binding proteins such as TroA that interacts with an ATP-binding cassette transport system in Treponema pallidum. ZnuA is part of the bacterial zinc-uptake complex ZnuABC, whose components are the following families, ZinT, pfam09223, pfam00950, pfam00005, all of which are regulated by the transcription-regulator family FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), a high-affinity zinc-uptake protein. In Gram-negative bacteria the ZnuABC transporter system ensures an adequate import of zinc in Zn2+-poor environments, such as those encountered by pathogens within the infected host.	7.49572e-85
NC_013521.1|WP_012868624.1|4106012_4106954_-|cation-transporter	gnl|CDD|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	2.0889e-84
NC_013521.1|WP_012868638.1|4119193_4120144_+|alpha/beta-fold-hydrolase	gnl|CDD|130316	TIGR01249, Putative_proline_iminopeptidase, proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.	4.37555e-78
NC_013521.1|WP_012868626.1|4107664_4108204_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.72513e-10
NC_013521.1|WP_042439769.1|4117152_4119072_-|hypothetical-protein	gnl|CDD|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	6.19133e-52
NC_013521.1|WP_012868641.1|4121890_4122763_-|glutamate-ABC-transporter-substrate-binding-protein	gnl|CDD|270408	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold. This group includes periplasmic glutamate-binding domain GluB from Corynebacterium efficiens and its related proteins. The GluB domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.92319e-96
NC_013521.1|WP_012868629.1|4110325_4110802_-|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.22046e-13
NC_013521.1|WP_012868628.1|4109559_4110252_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|378968	pfam12840, HTH_20, Helix-turn-helix domain. This domain represents a DNA-binding Helix-turn-helix domain found in transcriptional regulatory proteins.	2.43191e-12
NC_013521.1|WP_012868639.1|4120219_4121086_-|amino-acid-ABC-transporter-permease	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	6.54398e-57
NC_013521.1|WP_012868642.1|4122897_4123671_-|amino-acid-ABC-transporter-ATP-binding-protein	gnl|CDD|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	7.20791e-155
NC_013521.1|WP_012868631.1|4111775_4112279_+|redox-sensitive-transcriptional-activator-SoxR	gnl|CDD|133385	cd01110, HTH_SoxR, Helix-Turn-Helix DNA binding domain of the SoxR transcription regulator. Helix-turn-helix (HTH) transcriptional regulator SoxR. The global regulator, SoxR, up-regulates gene expression of another transcription activator, SoxS, which directly stimulates the oxidative stress regulon genes in E. coli. The soxRS response renders the bacterial cell resistant to superoxide-generating agents, macrophage-generated nitric oxide, organic solvents, and antibiotics. The SoxR proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the unusually long spacer between the -35 and -10 promoter elements. They also harbor a regulatory C-terminal domain containing an iron-sulfur center.	1.34682e-69

Protein sequences

>NC_013521.1|WP_012868633.1|4112914_4113427_-|hypothetical-protein
MSDSHYDTQFFVVDEAAGTVDELKDALRDWAQTRESGTLQEHTPAEGLEFFAWEIAGCTFSVSFDDVADEDRWHYAGPIADSHAALAVYGAPFFVAVTGSAPEDEDGVADLECLLTEGLELARVFERPGVVAVGMGPGGKRDAAEAVPGTELAEPDEAFVVELRKRQVTH
>NC_013521.1|WP_012868632.1|4112315_4112825_-|hypothetical-protein
MSDPHYVHHFFVVEQAGGTPDEIREELRTWAATRDEGVLEEHDVLGGFHTWAVGETTYSITVDPLGDEDRWHHARQVADSRLAAAVHGASTLVVITGGAREDDPDPDVHAVWEAAHDLRVLFARPGRVSVEMGADGTMGLAEAVPGTALPEVDDAFVQDLRREQSAHQP
>NC_013521.1|WP_012868631.1|4111775_4112279_+|redox-sensitive-transcriptional-activator-SoxR
MADRTSRTADERAPEQLLSIGEVSRRTGVAVSALHYYERIGLIASTRTSGNQRRYRRHMIRRVTLITVGKRLGVPLSDVQDALRTVPLDSTPSHDDWQRASRQWKSVLEQRRRAIEQLEHELTGCIGCGCLSMKSCLLLNPQDSLGDDGAGARRLDLPGEAPQATSP
>NC_013521.1|WP_012868630.1|4110866_4111700_+|alpha/beta-hydrolase
MPTPPVSPDSADASSDTAGTPSAASTPRPRRRRRGLKITLASVLAVLVVAVGAFLFWANDTYTAEPAGLAAVQEDPRVDVDDQGDVVVLRPTGESDGRGLVFLSGAKVDPQAYAATFQEVAAEGTTVVIVKPFLNLAILERRPLDAFTDLAPDVDSWAVGGHSMGGVKACSYAESGDVDALVLLASYCSGDALAERTDLDVISVSGTQDGLATPEKIDDSLADLPASTTVVRIDGASHAQFGDYGLQPGDGTPTISDDAARESISQALVPFLGPDEQ
>NC_013521.1|WP_012868629.1|4110325_4110802_-|MarR-family-transcriptional-regulator
MTRPPGAGPELSTALLRDLQDAIGEAGSALARRMEMSATDASAIEHISLSAALLSPGELGERLAVTRSSATEIVDRLERAGHVERVRDESDRRRFRLVPTEGAKMRVRGELAPLVTALDAAADGLGPAEREVVATYLRRVVAAYRGFAQDEEGARPEG
>NC_013521.1|WP_012868628.1|4109559_4110252_-|helix-turn-helix-transcriptional-regulator
MTAPRTPEDQPTASLRIQDVGALRALANPLRMRILGRLRQEGPATVGALASATGTAAGSVSFHVRTLVEHGLVVEVPELARDRRERWWAATSRTTSWEPGDFQQTEDGRDATGELERAVLRSQLASAEAALDHRSQTDPEWVAAGAYGDDRLLLTLDEARELRADLEGVMARWRARADAGRAAPGAGGAGEAVGGKSADSDTTDGKATDSGAAQQVAPVVVVVHTYRAAP
>NC_013521.1|WP_042439762.1|4108222_4109452_-|MFS-transporter
MIATGGNVVTLVALPLYVLAETGSASMAGVLAVVTTVPVVLGGAFGGVLVDRVGYRRSSVVSDLVGGVTIGMVPLLHVTVGLPFWALLVLVFATGLLDTPGQGARTALVPEAAALAGVPLERAMGWWGAGSRSATLLGGPVAGLLVATLGAVPALVVNAATFALSALVVVLGVPRALRPTVEAAAPATTVGTAAATAAGDREGYWAALRAGVAVIWRVPLLRAVVLLVMVTNALDVARANVLVPIYADRVLGGAQALGLIVGAMGLGAFAGALLFSAVGPRLPRRATFAWGFLLAGGPSMLVFALQPSLVWCLVATALAGLAAGALNPIIGTVLLEEVPASMRARVSGAVSAGAWAAMPVGALAAGVLVEQVGLVACFVGFGVVYVLVTLVPFLPTPWRAMDRRAVGPG
>NC_013521.1|WP_012868626.1|4107664_4108204_+|TetR/AcrR-family-transcriptional-regulator
MPHSDRSAIIDGAATVFARHGYDRASVQAVADATGYSKAGLLHHVSSKKDLYQSVLAECQAQMERARDRVADLPVGPTRDRRAIEIYTELAFALPGHVSLLLSTIAPMGDKVREEVDAISPLLFEAFDGSGQVPERRTIRVTGALVAVGALTLAARETDDPASWRDEIVEAGYDTLGHR
>NC_013521.1|WP_012868625.1|4106950_4107385_-|helix-turn-helix-transcriptional-regulator
MHAYTQTDEHGLEVPDASEASDAPDSRRGEIEDHLVELAVEVFAMFADATRLRIVLALRDGELPVARIAETVGKSPSAVSQHLAKLRMARMVSTRQDGTRVFYRLTDEHVRELVTDAIYQAEHVAEGLPRLHHHEADDGSGASR
>NC_013521.1|WP_012868624.1|4106012_4106954_-|cation-transporter
MTGHSHDHGPSASASVAEARSHRRRLAIAFSITSTVLVVEVVGAIWTGSLALLVDAAHMLTDAGGLLLALVASVLTMRAPTARRTWGLRRAEVLAALAQAAVLLAVGVYVVVEAVQRLFDPPEIPSTELLVFGVIGLLANIASIAVLASARSANLNLRAAFLEVVNDALGSVAVIVAAIVISTTGWGGADAIAALFVGFLIIPRTVRLLREALDVLLESTPRGLDLDAVRDHLLGVDLVRGVHDLHASQIATGLPVLTAHVVVDDECFHDGHVPRILDALQECVAGHFEVNIEHSTFQLEPPSHAEHEAGVHA
>NC_013521.1|WP_012868635.1|4115220_4116087_+|zinc-ABC-transporter-substrate-binding-protein
MRRSPAALAATALAACAFLTACSDTDASADGTVDVLASFYPLQYVVEQVGGEHVTVSNLTPPAAEPHDLELSPAQVRGIGTADLVVYLSGLQAATDEAVSAQSPEHVVDSAEAAEADAADPHFWLEPTRLSMVGDAVAAELSAIDPDNAADYAAGAEALTATLDGLDEEFSEGLAQCEGATLVTSHEAFGYLADRYGLVQEGISGINPDAEPSPKRLRDVRAIVERDGVSTLFFERSLGPKVTQTLADDIGVSTALLDPLESRTDESRDYVDIMRANLEALTTGLACD
>NC_013521.1|WP_012868636.1|4116319_4116973_-|copper-resistance-protein-CopC
MTSTSVRTRRRTAPRALLVGLLSAVALVLGGTTASAHDTVLGTAPGDGETLTTAPTQVSVELSAVPQAIGSRMLVTSSDGTVLFDGEPTIADRVASVELPAVANDGYTVAWRLVSSDGHPIDGTFGFVVDDPAAVAPTEDPTMETQGETDATTDAETSEAATATTDASDPSPSATDAASDEDSSGTSWLPVAGVVVVVVGLVLLVLFRRRSALQDQS
>NC_013521.1|WP_042439769.1|4117152_4119072_-|hypothetical-protein
MTSPRLRRRPRLWSFGAATLSTVLVVGGLAACSDEPDPLAEATTLATALGEGLADGDLSGIAFSDVSADEATASHAAVVAAVADSPHDVELTEVVLADDETSGTATYTHTWDIAGNPWTYDTQAPLALYEDVWEAQWAPDLVVDGLESDEVLRLSRTTAPRADILGAGDTPIVTQRPVKRVGVDKTRVEPADLDGTARALAELAQIDPEAYAAKVAGAGEKAFVDAVTLRAEGGAYDFDAMAAIPGVLLIDGTLPLAPTREFASDLLGRAGEATAEIVEASEGTIAAGDVTGLSGLQRQYDEQLRGTPGVALEAVSEAREPRVLLAEDPVPGEPLRTTLDVGVQELADSVLVGQEVPAAIVAIRPSTGEVLASATGAAGTGTATTAMYAPGSTFKVVTALALLRNGLTPDTPLDCSAEAVVDGRAFVNYPDYPAGKSGEISLTDVIANSCNTALINASGQVTQADLASAGEALGLGLAQQPGPGVFTGSVPAEAEGTEHAASMIGQGQVQASPVAMATVAASVAAGTTVRPTFLAQEADPVDSDLPDAAAAPLTADEAAQLGAFMRAVVTDGGGSFLLDVPGEPVGAKTGTAQYGDGSTNHAWMIATQGDLAVAVFVETGDYGSTTAGPLLEAFLVGLA
>NC_013521.1|WP_012868638.1|4119193_4120144_+|alpha/beta-fold-hydrolase
MTLPSQPTDVLSSGTLDTVDGQSVYWESWGSADGVPAVFLHGGPGSGFGDGHRQHFDARRHLVVALDQRGCGRSRPLATGPGADLAAITTERMVADVEALREHLGIEEWLVVGVSWGTTLALAYAQAHPSRATGLVLGAVTTTSAAEVEWITESMRAVFPAQWEAFASASGRAPGQRVVDAYRERLTDPDRGVREAAALAWCTWEDVHVSLATGGAPSPRYEDPEFRLLFATLVVHVWAASGFAPPEGILGRVDRVAHLPAVLVHGALDISSPLSTAYDLHRAWPASELVVVGSDGHGGASMAEEITRAVARLTLS
>NC_013521.1|WP_012868639.1|4120219_4121086_-|amino-acid-ABC-transporter-permease
MSGNVLYDAPGPKTRRLERIGSIVFAVILLGLLAWMIKGMADRGIFDDRWAVLTDPPKGQSAEDVWKSLVVTGLGATLKAAVVAAPLALVLAFVLAILRTSGIRVVRGAATAVIEVLRGLPVLLMMLFALLAFGLSSFQAVVIGLTLYNAAIVAEILRAGLAALPKGQAEAGTAIGLTRGQTLRLVQLPQVIRLMLPSLISQFVVLLKDSSLGFIVGYPELLNAMKTNYNFFGSDSRLPLFLVVAVVYLTVNIALSRLAVYIEKRLSSRGQKPVATGLATPDLGKTTV
>NC_013521.1|WP_012868640.1|4121082_4121733_-|amino-acid-ABC-transporter-permease
MQALVDELPRIWQGFQLTLFLAVVSGALSLVFGTILAAFRVAPLRSLRTFAGAYVEVARNTPLTLVFIFFVFVLPSLGFILPLGRVPAIIALTAYTSAFVCEAVRSGINSVAVGQAEAARAIGLGTVQTLSLVVLPQALRTVVPPLINVLIALTKNTSVAAGFAVVELTSTSRALARDNPADVVLLLTGIAVCYLVITIPAGIAANAIERKVVFSR
>NC_013521.1|WP_012868641.1|4121890_4122763_-|glutamate-ABC-transporter-substrate-binding-protein
MRNRPTAFLAIAAASALLLSACGGDDSSEDPPVADVDAAEFPEGSTMARLAEAGTMTVGTKFDQPLFGLVGPDGTPVGFDVEIAKIIAGELGIAPDDIEWTETVSANRETFIQEDRVDIVVATYTINDDRKQVIDFAGPYYLAGQSLMVNADDDSIQSEDDLAGKIVCSAEGSTPAKNIEENFPDADLRTFSQYTDCLDPLRNGQVDVLTTDNVILAGYVAESPDDFKLAGEQFTEEPYGIGLKKDDTDFRNFINDTLEAAYEDGRWDAAWEATAGEVLDTPTPPAVDRY
>NC_013521.1|WP_012868642.1|4122897_4123671_-|amino-acid-ABC-transporter-ATP-binding-protein
MDDTTQKAEGGSPAALVALTGVNKHFGDLHVLKDIDLSVRRGEVVVVIGPSGSGKSTLCRAINRLETIDSGTIELDGHQLPEEGKALARLRADVGMVFQSFNLFAHKTILENVTLGPIKVKGMKSAEAKELAMSLLERVGIESQAGKMPAQLSGGQQQRVAIARALAMQPKVMLFDEPTSALDPEMINEVLDVMVGLAKDGMTMIVVTHEMGFARKAADRVVFMADGQIVEEAEPEEFFTNPRSERAQEFLSKILTH
>NC_013521.1|WP_012868643.1|4123956_4124778_-|NAD(P)-dependent-oxidoreductase
MTEQNPTVVVSGASGSIGTYLRQTGGGLPARGWSLRLLGGHEPDELLPGEEGTPFFTADISEEDSRDALDEAFAGADAVVHLAGIPGEDSWTTIRRTNIDGTYRVLEAARRAGVRRVVLASSNHAVGYLPTGETARTDVAPRPDTYYGVSKAAMEALGSLYADKYGLEVVSLRIGMCADRPVSTFDLGIWLSPGDTVRLVDASLRGEVSGPVIAYGVSANTRGWWDLASARALGYKPRDDAEAFVDEVEPYDGPEGVLGHGFVALDPHEHQGE
>NC_013521.1|WP_081448042.1|4124728_4125811_+|SMP-30/gluconolactonase/LRE-family-protein
MLPEAPETTTVGFCSVTGGPPGVGSGAPGVRSHQSSPEVARLHAGHRGQSPPGVPRCPPGVAPSPVRRWTTPRTRRKDLPVRQAEQITDPIAYHGEGPVWSPSWGGLRWVDMLAGDLLTLRSDGSVDRLHVGDVAAFARPRSNGGYVVAVERGIALADGPDDVPTPLEPLWDDPSVRMNEGGCDPHGNLYAGGMAYDQRPGGAGLYRITPEGDVSVVLAQVTVSNGLDFSPEGDLAYYNDTATGTTDVFDVVDGELTGRRVFHSSDGTHADGLTVDSVGNVWVALNGAGRVRCYSPRGTVLEEIEVPVRLVTAVTLGGPDLTDLYITTSKENLDDPEPEAGALFRTTVDVPGKPVLPYRG

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	461239-461265	3	0.889
NC_013521_1	1.4|291222|27|NC_013521|CRISPRCasFinder	291222-291248	27	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	95489-95515	4	0.852
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	82489-82515	4	0.852
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	69663-69689	4	0.852
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	268399-268425	4	0.852
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1542887-1542913	4	0.852
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	1046816-1046842	4	0.852
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	174898-174924	5	0.815
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NZ_CP013855	Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence	111255-111281	5	0.815
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NZ_CP047896	Sphingomonas sp. C33 plasmid pC33, complete sequence	27935-27961	5	0.815
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NZ_CP039912	Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625a, complete sequence	168772-168798	5	0.815
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NC_015169	Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence	134386-134412	5	0.815
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NZ_CP038031	Rhodococcus ruber strain R1 plasmid unnamed1, complete sequence	103599-103625	5	0.815
NC_013521_1	1.4|291222|27|NC_013521|CRISPRCasFinder	291222-291248	27	NZ_KY349138	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence	102669-102695	5	0.815
NC_013521_1	1.5|291273|27|NC_013521|CRISPRCasFinder	291273-291299	27	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1522431-1522457	5	0.815
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	891353-891379	5	0.815
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	288759-288785	5	0.815
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	MF140401	Arthrobacter phage Caterpillar, complete genome	9784-9810	5	0.815
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	MN284902	Arthrobacter phage Makai, complete genome	10758-10784	5	0.815
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	MF140423	Arthrobacter phage Nightmare, complete genome	10621-10647	5	0.815
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	MH450125	Arthrobacter phage MediumFry, complete genome	9813-9839	5	0.815
NC_013521_1	1.1|291066|27|NC_013521|CRISPRCasFinder	291066-291092	27	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	480864-480890	6	0.778
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1830069-1830098	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1216426-1216455	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1813117-1813146	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	226345-226374	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	268824-268853	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1174589-1174618	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1149550-1149579	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1263746-1263775	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	916823-916852	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1177532-1177561	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1177532-1177561	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MH155873	Microbacterium phage Paschalis, complete genome	44701-44730	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MH590600	Microbacterium phage KaiHaiDragon, complete genome	44608-44637	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MK977698	Microbacterium phage Busephilis, complete genome	44617-44646	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MK875798	Microbacterium phage Piperis, complete genome	44609-44638	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MT818415	Microbacterium phage Scumberland, complete genome	44925-44954	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NC_047993	Microbacterium phage Quhwah, complete genome	45300-45329	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MN062719	Microbacterium phage PiperSansNom, complete genome	44986-45015	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MN444877	Microbacterium phage Antares, complete genome	44910-44939	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	760737-760766	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	811396-811425	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1455423-1455452	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	725679-725708	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	884016-884045	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1473019-1473048	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	901723-901752	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1077624-1077653	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	639824-639853	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1230584-1230613	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	800846-800875	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	888362-888391	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1210439-1210468	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	609291-609320	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	814902-814931	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	714236-714265	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	813504-813533	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1001748-1001777	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	810708-810737	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	888351-888380	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1001715-1001744	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	876690-876719	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	921416-921445	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1001716-1001745	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	781308-781337	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	876690-876719	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	921416-921445	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1001729-1001758	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	876690-876719	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	781331-781360	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	876694-876723	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	921416-921445	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	921416-921445	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	921416-921445	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1001729-1001758	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1001718-1001747	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	781331-781360	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	817225-817254	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	797917-797946	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	852152-852181	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	889034-889063	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1001718-1001747	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	781331-781360	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	876690-876719	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1001714-1001743	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	781331-781360	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	781331-781360	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1001729-1001758	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	921418-921447	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1001740-1001769	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1001718-1001747	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1218573-1218602	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	907663-907692	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	675869-675898	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	907670-907699	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1179255-1179284	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1179200-1179229	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	667833-667862	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP039426	Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence	1140-1169	6	0.8
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP039431	Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence	1140-1169	6	0.8
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NZ_CP011248	Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence	48276-48302	6	0.778
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	CP036360	Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence	142416-142442	6	0.778
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NZ_CP032923	Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence	96655-96681	6	0.778
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NZ_CP032919	Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence	48037-48063	6	0.778
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NZ_CP033029	Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence	48121-48147	6	0.778
NC_013521_1	1.3|291171|27|NC_013521|CRISPRCasFinder	291171-291197	27	NC_015184	Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence	249337-249363	6	0.778
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	NZ_CP045095	Streptomyces sp. GY16 plasmid unnamed1, complete sequence	15439-15465	6	0.778
NC_013521_1	1.6|291324|27|NC_013521|CRISPRCasFinder	291324-291350	27	NZ_CP032678	Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence	720948-720974	6	0.778
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	545373-545402	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	436278-436307	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	762823-762852	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	759899-759928	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	658005-658034	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	733232-733261	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	657120-657149	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	659955-659984	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	659945-659974	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	657993-658022	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	658011-658040	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	657990-658019	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	762887-762916	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	762887-762916	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	762873-762902	7	0.767
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MH155873	Microbacterium phage Paschalis, complete genome	46786-46815	8	0.733
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MK977698	Microbacterium phage Busephilis, complete genome	46702-46731	8	0.733
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MK875798	Microbacterium phage Piperis, complete genome	46694-46723	8	0.733
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NC_047993	Microbacterium phage Quhwah, complete genome	47415-47444	8	0.733
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MN444877	Microbacterium phage Antares, complete genome	46995-47024	8	0.733
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	392692-392721	8	0.733
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP032691	Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence	384009-384038	8	0.733
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MT657336	Microbacterium phage ClearAsMud, complete genome	47023-47052	8	0.733
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	NZ_CP025613	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence	497025-497054	8	0.733
NC_013521_1	1.2|291117|30|NC_013521|CRISPRCasFinder	291117-291146	30	MF417880	Uncultured Caudovirales phage clone 9F_5, partial genome	22813-22842	8	0.733

1. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 3, identity: 0.889

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
gccatctcgacggtccgggtgccggag	Protospacer
 **.***** *****************

2. spacer 1.4|291222|27|NC_013521|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.852

accgtctcgtcggagtagacgcccgcg	CRISPR spacer
agcgtctcgtcggagtagaccccctcc	Protospacer
* ****************** *** * 

3. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 4, identity: 0.852

accccgtcgatgacgtaggtgccggag	CRISPR spacer
gcgccgtcgacgatgtaggtgccggag	Protospacer
.* *******.**.*************

4. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 4, identity: 0.852

accccgtcgatgacgtaggtgccggag	CRISPR spacer
gcgccgtcgacgatgtaggtgccggag	Protospacer
.* *******.**.*************

5. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 4, identity: 0.852

accccgtcgatgacgtaggtgccggag	CRISPR spacer
gcgccgtcgacgatgtaggtgccggag	Protospacer
.* *******.**.*************

6. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 4, identity: 0.852

accccgtcgatgacgtaggtgccggag	CRISPR spacer
gcgccgtcgacgatgtaggtgccggag	Protospacer
.* *******.**.*************

7. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 4, identity: 0.852

accccgtcgatgacgtaggtgccggag	CRISPR spacer
gcgccgtcgacgatgtaggtgccggag	Protospacer
.* *******.**.*************

8. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 5, identity: 0.815

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
accgtctcgtcggtcacggtgccggcc	Protospacer
 **************  ********  

9. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 5, identity: 0.815

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
cccgtctcgtcggtgcgggtggcgagc	Protospacer
************** ****** **.. 

10. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NZ_CP047896 (Sphingomonas sp. C33 plasmid pC33, complete sequence) position: , mismatch: 5, identity: 0.815

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
cccgtctcatcgttccgggtgccgctc	Protospacer
********.*** ***********   

11. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NZ_CP039912 (Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625a, complete sequence) position: , mismatch: 5, identity: 0.815

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
cccgtgtcgtcggtcggggtgcctacg	Protospacer
***** ********* ******* . *

12. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 5, identity: 0.815

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
aacatctcgtcggtcagggtgccgtag	Protospacer
  *.*********** ******** **

13. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NZ_CP038031 (Rhodococcus ruber strain R1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
ccggtctcgtcggtgcgggtgccctcg	Protospacer
** *********** ********   *

14. spacer 1.4|291222|27|NC_013521|CRISPRCasFinder matches to NZ_KY349138 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence) position: , mismatch: 5, identity: 0.815

accgtctcgtcggagtagacgcccgcg	CRISPR spacer
cgcatcgcgtcggagtaggcgcccgcg	Protospacer
  *.** ***********.********

15. spacer 1.5|291273|27|NC_013521|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 5, identity: 0.815

acggtgtcgctcgagtacacgcccgac	CRISPR spacer
tcagggtcgctcgagttcacgcccgat	Protospacer
 *.* *********** *********.

16. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.815

accccgtcgatgacgtaggtgccggag	CRISPR spacer
gcggcctcgatgacgaaggtgccggag	Protospacer
.*  * ********* ***********

17. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.815

accccgtcgatgacgtaggtgccggag	CRISPR spacer
gcggcctcgatgacgaaggtgccggag	Protospacer
.*  * ********* ***********

18. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to MF140401 (Arthrobacter phage Caterpillar, complete genome) position: , mismatch: 5, identity: 0.815

accccgtcgatgacgtaggtgccggag	CRISPR spacer
atgtcgtcgatgccgtaggtgccggcg	Protospacer
*. .******** ************ *

19. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to MN284902 (Arthrobacter phage Makai, complete genome) position: , mismatch: 5, identity: 0.815

accccgtcgatgacgtaggtgccggag	CRISPR spacer
atgtcgtcgatgccgtaggtgccggcg	Protospacer
*. .******** ************ *

20. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to MF140423 (Arthrobacter phage Nightmare, complete genome) position: , mismatch: 5, identity: 0.815

accccgtcgatgacgtaggtgccggag	CRISPR spacer
atgtcgtcgatgccgtaggtgccggcg	Protospacer
*. .******** ************ *

21. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to MH450125 (Arthrobacter phage MediumFry, complete genome) position: , mismatch: 5, identity: 0.815

accccgtcgatgacgtaggtgccggag	CRISPR spacer
atgtcgtcgatgccgtaggtgccggcg	Protospacer
*. .******** ************ *

22. spacer 1.1|291066|27|NC_013521|CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

atgagaccgtcggtgtagatgcccgag	CRISPR spacer
atgagaccgtcggtgtagagggcgacc	Protospacer
******************* * * .  

23. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

24. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

25. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

26. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

27. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

28. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

29. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

30. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

31. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

32. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

33. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

34. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MH155873 (Microbacterium phage Paschalis, complete genome) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
atgccgtcctcgccgttgtagacccgccag	Protospacer
*.************* *********   * 

35. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MH590600 (Microbacterium phage KaiHaiDragon, complete genome) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
atgccgtcctcgccgttgtagacccgccag	Protospacer
*.************* *********   * 

36. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MK977698 (Microbacterium phage Busephilis, complete genome) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
atgccgtcctcgccgttgtagacccgccag	Protospacer
*.************* *********   * 

37. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MK875798 (Microbacterium phage Piperis, complete genome) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
atgccgtcctcgccgttgtagacccgccag	Protospacer
*.************* *********   * 

38. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MT818415 (Microbacterium phage Scumberland, complete genome) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
atgccgtcctcgccgttgtagacccgccag	Protospacer
*.************* *********   * 

39. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NC_047993 (Microbacterium phage Quhwah, complete genome) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
atgccgtcctcgccgttgtagacccgccag	Protospacer
*.************* *********   * 

40. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MN062719 (Microbacterium phage PiperSansNom, complete genome) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
atgccgtcctcgccgttgtagacccgccag	Protospacer
*.************* *********   * 

41. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MN444877 (Microbacterium phage Antares, complete genome) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
atgccgtcctcgccgttgtagacccgccag	Protospacer
*.************* *********   * 

42. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

43. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

44. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

45. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

46. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

47. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

48. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

49. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

50. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

51. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

52. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

53. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

54. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

55. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

56. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

57. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

58. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

59. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

60. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

61. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

62. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

63. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

64. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

65. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

66. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

67. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

68. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

69. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

70. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

71. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

72. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

73. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

74. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

75. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

76. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

77. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

78. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

79. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

80. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

81. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

82. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

83. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

84. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

85. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

86. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

87. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

88. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

89. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

90. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

91. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

92. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctcgccggtgtagaccttgagc	Protospacer
 ***** *****************..*..*

93. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccctgagc	Protospacer
 ***** *** **************.*..*

94. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccctgagc	Protospacer
 ***** *** **************.*..*

95. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccctgagc	Protospacer
 ***** *** **************.*..*

96. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccctgagc	Protospacer
 ***** *** **************.*..*

97. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccctgagc	Protospacer
 ***** *** **************.*..*

98. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccctgagc	Protospacer
 ***** *** **************.*..*

99. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccctgagc	Protospacer
 ***** *** **************.*..*

100. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP039426 (Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
accccgtcctcgccggtgtaggcggtgggc	Protospacer
** ******************.*  .**.*

101. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP039431 (Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
accccgtcctcgccggtgtaggcggtgggc	Protospacer
** ******************.*  .**.*

102. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NZ_CP011248 (Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence) position: , mismatch: 6, identity: 0.778

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
tgcgtctcgtcgatccgcgtgccggcc	Protospacer
. **********.**** *******  

103. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to CP036360 (Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence) position: , mismatch: 6, identity: 0.778

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
tgcgtctcgtcgatccgcgtgccggcc	Protospacer
. **********.**** *******  

104. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NZ_CP032923 (Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence) position: , mismatch: 6, identity: 0.778

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
tgcgtctcgtcgatccgcgtgccggcc	Protospacer
. **********.**** *******  

105. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NZ_CP032919 (Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence) position: , mismatch: 6, identity: 0.778

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
tgcgtctcgtcgatccgcgtgccggcc	Protospacer
. **********.**** *******  

106. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NZ_CP033029 (Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence) position: , mismatch: 6, identity: 0.778

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
tgcgtctcgtcgatccgcgtgccggcc	Protospacer
. **********.**** *******  

107. spacer 1.3|291171|27|NC_013521|CRISPRCasFinder matches to NC_015184 (Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence) position: , mismatch: 6, identity: 0.778

cccgtctcgtcggtccgggtgccggag	CRISPR spacer
tgcgtctcgtcgatccgcgtgccggcc	Protospacer
. **********.**** *******  

108. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to NZ_CP045095 (Streptomyces sp. GY16 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

accccgtcgatgacgtaggtgccggag	CRISPR spacer
aagccgtcgatgtcgtaggtgccgcgc	Protospacer
*  ********* *********** . 

109. spacer 1.6|291324|27|NC_013521|CRISPRCasFinder matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 6, identity: 0.778

accccgtcgatgacgtaggtgccggag	CRISPR spacer
accccgtcgattacataggtgccaccc	Protospacer
*********** **.********.   

110. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
acgccgtcctcgccggtgtggatgcagtgg	Protospacer
*******************.**. * * . 

111. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

112. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

113. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

114. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

115. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

116. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

117. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

118. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

119. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

120. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

121. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

122. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

123. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

124. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccgccggcctggccggtgtagaccttgagc	Protospacer
 ***** *** *************..*..*

125. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MH155873 (Microbacterium phage Paschalis, complete genome) position: , mismatch: 8, identity: 0.733

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
gcattgtcctcgtcggtgtagacctcgggg	Protospacer
.*...*******.***********.***. 

126. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MK977698 (Microbacterium phage Busephilis, complete genome) position: , mismatch: 8, identity: 0.733

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
gcattgtcctcgtcggtgtagacctcgggg	Protospacer
.*...*******.***********.***. 

127. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MK875798 (Microbacterium phage Piperis, complete genome) position: , mismatch: 8, identity: 0.733

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
gcattgtcctcgtcggtgtagacctcgggg	Protospacer
.*...*******.***********.***. 

128. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NC_047993 (Microbacterium phage Quhwah, complete genome) position: , mismatch: 8, identity: 0.733

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
gcattgtcctcgtcggtgtagacctcgggg	Protospacer
.*...*******.***********.***. 

129. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MN444877 (Microbacterium phage Antares, complete genome) position: , mismatch: 8, identity: 0.733

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
gcattgtcctcgtcggtgtagacctcgggg	Protospacer
.*...*******.***********.***. 

130. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 8, identity: 0.733

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccatcgtcctcgccggtgtcgaccccatca	Protospacer
 *..*************** ******.   

131. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 8, identity: 0.733

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
ccatcgtcctcgccggtgtcgaccccatca	Protospacer
 *..*************** ******.   

132. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MT657336 (Microbacterium phage ClearAsMud, complete genome) position: , mismatch: 8, identity: 0.733

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
gcattgtcctcgtcggtgtagacctcgggg	Protospacer
.*...*******.***********.***. 

133. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
tcgccgtcctcgtcggtgtagagtgggctc	Protospacer
 ***********.********* .  *  *

134. spacer 1.2|291117|30|NC_013521|CRISPRCasFinder matches to MF417880 (Uncultured Caudovirales phage clone 9F_5, partial genome) position: , mismatch: 8, identity: 0.733

acgccgtcctcgccggtgtagaccccggac	CRISPR spacer
tttccatcatcgccggtgtagaccccaaag	Protospacer
 . **.** *****************..* 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	2955872 : 2967969	11	Bacillus_phage(50.0%)	tail,plate	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_013521|2955872:2967969|DBSCAN-SWA
CGTGCCTACCTACACCGCGCCCGGCGTCTACATCGAAGAGATCCCGTCGTCCCAGAAGGTCCTCTCGTCGGCGCCCACCGCCGTCGCAGCCTTCGTCGGCTTCACCGAGCGCGCGCCGCTCGACGACCCGACCGACCCCGAGGGCCTGGCCCCGAGGCTCGTCACCAGCTGGACCCAGTTCGAGAAGCTCTACGGCGGGTTCGTCGAGGGCGCCGTGCTGCCCCTGTCCGTCTACGGGTTCTTCCTCAACGGCGGCAGCCTCGCCTACGTCGTGCGCATCCCCAACGTGCAGCCGGCCGGCGAGCCCGCCCGCCTCGCGCTGCCGGCCGTCGACCGTGCGCTCGGCCTGCCGATCGCGGTCGAGAGCATCGAGCCCGACGCGAACATCTCCGTCGCGGTCGAGACGGTCGAGCCCGACGAGGACGTCGACGGCCCCTCCGCCTTCACCATCCGGATCCTCGAGGGCGACGAGGTCGTCGAGAGCTACGAGGACCTCACCATCGGTGGGGCCACCGACGCCGCGACGGTCATCAACAAGACGTCGACCCGCGTCAAGGTCGAGGTCACCCTCGAGGCCAAGACGGACCTGTCGAGCCAGCTCGAGATCCTCAAGCCCGGTCTGTACCCGCTCGAGAAGGCCGCCCCGGTCTCGGTGCCCGTCTCCGGACGCAAGTTCGCCGGCTCCGAGAACGCCCGCACCGGCATCAACGGTCTGGCCATCGCCGAGGACGTGACGATCGTCGCGGTCCCCGACCTGGTCACCGCCGCGACCCGCGAGGACGGCACCCTCGACCTCGACCTGTGGAAGGCCGTGCAGACCGCGCTCATCGCGCACTGCGAGCTGCACCCCAACCGCATGGCCATCCTCGACGCCCCTCCCGGCTTCGGCCCGCAGCAGGTCAAGGAGTGGCGCACCGAGACCGCGCAGTACGACTCGGCCTTCGCGACGCTGTACTACCCGTGGATCAAGGTCGAGAACCCGGTCCCCGGCGCCACCCAGGCGGACGTCCTCATCCCGCCGTCCGGCCACGTGGCCGGCGTGTGGGCCCGGACCGACGACGCCCGCGGCGTGTGGAAGGCCCCGGCCAACGACACCATCCGCGGCGTGCTCGACGTCGAGCGCTCGATCACCCAGAACGAGCAGTCGATCCTCAACCCGCTCGGCATCAACGCGATCCGGCCCTTCGGCACCCGCGGCATCCGCATCTGGGGCGCGCGCACCCTCGCCTCGGACACCGACTGGCAGTACATCAACGTCCGTCGTCTGTTCAACATGATCGAGTCGACGATCCTCGAGGGCACCCAGTGGGCCGTCTTCGAGCCCAACGACGTCACGCTGTGGGAGGGCGTCAAGCGAACGCTCACCGGCTACCTCCACGGCCTGTGGCAGTCGGGCGCACTGTTCGGCGCGAGCGCCGACCAGGCGTTCTTCGTCAACTGCGACTCGACGACCAACACCCCCGAGTCGATCGACGCGGGCAAGCTCGTCGTCGAGGTGGGGATCGCGCCGGTCAAGCCGGCCGAGTTCGTGATCTTCCGCATCAGCCAGAACAAGCAGACCGGCAGCTGACCTGCGGCACGACCGCCGCAGACCAGGGGCTCCCCGAGGGTCCCGGTCTGCGGCGTCCGTGCCCGGCCACGCCGCAACCGACCGCCCCGACGCAACGCGCCGGGGCCACTGAGCACCGCACCAGCACGTCACCCCGCACCGCACACCGACCCGAGGAGTCACCGTGGCCGCAGGCCTGTTCACCAACGACCCGATCATCGCGCAGAACTTCTTCCTGGAGATCGACGGATCCGTCATCTCCTCGCTCACCTCCGTGACGGGCCTCGACATCGAGGTCGCGGTGTCGACCACCCGTCAGGCCGGTGCCGGCGGCGTCGCCGAGGCCATCAAGGCCATGGGCACCCGGACCCTCGCACCGGAGATCACCCTCGTCCGCGTGGCACCGCTCGACTCGCCCAACGACAACATGTGGAAGTGGTTCAACGAGGTCCGCGGCTCCGGCCTGGCCGCGACGGACCGCGCCGCCCAGCGCAAGAACGGCTCGATCGTCCTCTACGACTCCGCCAAGAACGAGGTCGCCCGCTTCAACTTCTTCAGCGCGTGGCCGTCGCGCATCGCGACCGACGGGCTCTCCGTCGACTCCAGCGAGGTCGTCAAAGAGACCATCACCCTCCAGTGCGAGCGTCTCGAGCGCGTCAAGTGACGCTCCAGACCCGCTTCACGTTCACCCTGCCGCGCGGCTACGTCGACGGGAGCGGCACGCTGCACCGTGAGGGCACCATGCGCCTGGCGACGGCTCGCGACGAGCTCGAGCCGCTGCGCGACCCCTCGGTCGACGGCCCGGACGACCCGCGCCTCACGGTCGTCGTGCTCGCGCGCGTCATCGAGTCGCTCGGCTCGCTCGAGCTCGTGACGACGCACGAGGTCGAGAACCTCTTCGCGGCAGACCTCGCGTTCCTGCAGGACTTCTACGGTGTCATCAACTTCGGCACGCAGGAGGAGTACGAGGAGCTGCTCGCGCTCCAGCGCGACGCGCTCGCGCCGATCCGTCAGGCACCTGCGGCGCCTGCTGCCACGGCGGCACCGACCGACGCTGTGCCCGGAGAGCCCGGAGTGCCGGCCACCGGTGACGACCAGGCGGGCAGCGCCCCGGCGCCGCAGCAGCCTGCGGTGTCCGCCTCGGTCACCTACGCGCGCCGGACCGCCGTCGAAGAGATCCCGCAGGACGTGCGATAGCTCGATGCTCCGTTATCCGGCAGAAGCCCTGTGGCAGGAGATCGCGTACCTCGCGTACCACCTGCACTGGACCGTCGACGACCTCCTCGACCTCGAGCACCTCGACCGGGTCAGGATGATCCGAGCGGTGTCCTCGTTGAACGAACGCGCATGGGAGGCCGTCCGTGAGAGCGTCTGAGATGGAAGCCCTCGGGGGCGAGCCGACCACGGTCGGCCTGTTCCTCTTCGAGGTCGACGGTGTGCCCATCGGCACCTTCCGCGAGGTCAGCGGGCTGCGCCTGACGGTGTCGGTCACCGAGCACGTGGAGGGCGGCCAGAACGGCTACACCCACAAGCTGCCCGGTGTGCTGCGGTGGCCCAACCTCGTCTTCACCCGTGGGCTCGTCGAGTCTGACGCGCTCTTCACCTGGGTGACGAGGTCGTCGGGCGAGGGCTTCGCCGCGAACGACAGCACGCTCACCCGGTCGACCGGCGCGGTCACCGCGCTCAACCACTCCGGCGACCGGCTGCGCGCGTGGGACCTCGACGGGGTCTTCGCGGTGGGGTGGGAGGGGCCGAGCTTCAGCGTCGACTCCGAGACCCAGCCGACCGAGCGCCTGGAGATCGCCCACAACGGCTTCCGCGCGAGGACGCCCTCATGACCGGCGCGACGGTCCCGGAGGCGGGGACGACGGGTGGGACAGGCGTCGGCGACCTCGCCACGCCCGGGCTCGTCGACGGCTCTGGCCCCGGCGACGGCACAGCGGCGGCTGGCCCGTCGCCCGTCTTGACCCTCCCGAGCTCTTTCGACGCCCGCTTCCGGACAGGCTTCGTCGGACGGGTCGGCGCGGACGCGATCCTCTTCGTCCGCGCGGTCGCCCGTCCGGGCACGCTCCGCGGGGTGGGATCGACGACCCCGCTCACCCGGCGCACCGCGCCCGTCCCGGTGCAGCCCGTGCGCCCCGGGAGCGTCGCCGCGCCGCGGTGGTGGAGCCCCGGGCAGCGGTCCGCGCAGCCTCTCGCGTCCGCCGCGCCGGCCGCTCCTGGAGCACCCGCCCAGCAGCAGCCCACGAGCTCCACCACGACCACCGGCCAGCAGGCGCACGCACCGAGCAAGCGCCTCGTTCCGCCCGCACGAGGCCCGGCCGGCGCCGCAGACCAGCAGCGTCAGCCCGCGAGCGCGACGACCCCGTCCGGAGCTGCAACGTCCGCCGCGGCAGGAACCTCTCCTGCTGCTGGGTCCCCGCTCGGCGGCTCTGCGCCGTCGAGCCCTCAGCCGACCCGCACCGGCGCGTCTGCAGCCCAGGCAGCGGCTCGCCCGCTCGTGCCGGCCGCGACGGCCGCCACGGCCGTCGGCGCTGCTGTCGCCGCACCCGCTCTCGCTGCGCCCGGCTACGCCCGCCCCGCCCTCCCGCAGCGCAGCGACGTCACGGCTCCGCTCCCGCGTCGTGGGCTGCCGACCGTGGTGCGGCGCGTCCCCGACGAGAAGACCTGGAACCCCGGGACCTTCTCCCGGACCGCGGTGCCGCAGGCGGTGCCCATGCGGCTGCCCGACGAGGTCCGGGCGGCCGGGTCGATGGTCCTGCCGCACGACCGTCGACGTCGAGACCTGCCGCGCCAGGCCGAGCCCGGACGGTCTGAGCCCGCACCGGGGAACTCCCCGGGAGCCGGACCGAGGCCGCCCGCCGCGGGGACGCGCGCGGCAGCCGGCTCCCGAGAGCCTGGACGGATCACCCTCCCCCCACGCGCGAGCACGCCGTCGCCCGACAGCGCCCGGACGAGGTCGGCGTCGACCGGCGGTGCGCTGGCCGGGGCTGCCCTGCTCGCGGGTACCGCGACCGCTGTCGCCACCTCGCCGTCGTCTCGACCGCTCGCTGTGCGTCGTGCCCTCGCGGCCCGTGAGGCGTCCGACCGCTTCGCCGAGCTCCGGCGCGAGTCCCGCGAGCGCCTGCTCCGCAACCGTGCGCGGGCCGAGGCCCCGGCGGAGGAGTCGCCAGACGGCTCGCGTCGCCGTCGCGCCGGCGGGCTGATGCTGCGGCGGGGCCCGGCTGGCAGGTCGACGGTCGCGCTCGCCGCGGTGGCCCCGGTCGTCGGGGCCGCTGCGGTCGCCGCTGCGCTCCGTGCTTCGCACGACAGGTCGCCGAGCCCTGCTCCGGCGTCTCGTCAGGAGGCGGCCGAGCGCGAGCCCTCCCGTCGTCGGGCCCTACCCGTCGTCCCCGTGCTGCGTCGGACCGCTGCTCGTCGCACGGGTGAGGTACGCCCCGCGGCGCAGCCGCGCCCTGCCCCGGCGCTGCGCCCGGCGCTCACCCGCCGCACCGCGCTGGTCCCGCGTCCCACGCCGGTCGCGCGGCCCGTCGCCGTCCCGAAGGCCACGGCTGGTCGTCCCAGCACCGCGCTGCGCCCGACCTCTCCGACGCGCCCTGCGTCGCAGGCGCGGACGGTCGTCCCGGCACGGACGGCTGCCGTGGTCGGTCTGTCGGTTCCCGCGTCGCGCCGTCGCGGCGTGGTGCCGCTCGTGGCACCGGCACGGACCCTGCGCCTGGCCCCGCCCGCGGTCGTCGGCGCAGCTCGCGTGCTGCCGGTCGCGGCGGCTCTGCTGAGCACCCGGACCCTGCTGCCGGCCGTGGGTCGGCTCGAGCCGGCCCGGACGGCGCGTCCGGGCCTGGCGCGCGCGGTCCCGGGCCGCAGCACCCTGGTCTCCCCGGCCCGGGTGGTCCCGCCGCGGACCGTGCCGGTCGCGGTCTCCCGGGTCGTCCCGGCGCGCAGCACGCCGCTCCCGGCCGCGCGCGTGGTGCCGGCACGCAGCGCACCCCTGGCGGCTGCCCGCGTGGTCCCGGCCCGGACCGCGCTCGTCTCGGCTCCCCGCGCCGTGCCGACCCGCGGCACGCCGGTCTCGGCCGCTCGAGCAGTCCCCGCTCGACGGGTGCTGGCACCCGTGGCCCTCCCGACGCGACCCGCCCCGCGGGTCCATGCCTCGCCCCCGGCTCTCACCGCCCGCCGGACCGCGGTCCCGAGCGCACCCCGCGCGGTCCCGAGCCGACGGCTCCTGGCACCCGTCCCGCTCCCGACGAGCCCCGCACCCCGCGTGCAGCCGGCGGTCCCGCCGTTCCCGGCCCGCCGTGCGGCTGCGCCCGGCGCACCGCGCTCGGTCCCGACGCGACGCGTCCTGGCGCCCGTCGCCCTCCCGGCACGGCCCGCGCCCCGCGTGCATCCCGCTGCCCCCGCGCCGGCGGCACGCCGCACCGTCGTGCCGGTCGCGCCGCGCCTCGTCCCGGGCCGGCGCGCCCTGGTCCCCGTGCCGCTGCCGCTGCGCCCGGCACCACGCGCGCTCCCGACGTCCCCCGGACGCGCAGTCCCGGCGGCGCGCGCCCACACCCCGGTGGCACCGCTGCGCGGTCGGGCCTCGCTCGCCCCGCAGGCTGCACCCGTCGCCCCGCCGGCGCGCAGGACGCACACGGCCATCCCGCGGATCATCACCGCGCCCGCGGCGACCACACCTCCGGTCGTGGTGCCCGTCGCCGCGCGGCGGCCGGCGTCTCTCGCCCCCGCGGGACCGGCCCTGGTCCCGACCGCCGTCGTGAGACCCGCGGTGGCCGCCCGGCCGGCGCCCGCTGCCGCCCCCTCGCCGCCCCCACGCCCGGCGGTGGCAGAGGCTGCGTCCATGGCAGCGCAGCTGGAGATCCTGCGCAAGCTCACCGGGAAGCCGCTCGGCGCCCCGTCCGAGCCTCGGCCCGAGCGCGAGCCCCTCCCGGTGCCTGCGCCACGGGCCCCGGCCGAGCCCGACCCCGCACCCGTGGTCGACCAGGCAGCGGTCGTCACCGAGATCCTCGCCCGGCTCGACTCGCGGATCGCCGCGCGGCTCGACGACACGCTCGCGCGGACCCTCGAGGACCGCGTCCTGCGGCGGGTCGAGGACCGCCTGCTCGACGAGTCGTCCCGCCACAGCTCTTCCTTCACGACTGGAGTGTTCTGATGTCTGCACCGGAGAAGGCCTTCATCGAGATCGAGGGCGGCACCCGAGTCCCGTGCCTGTTCAACCCGGCCCAGCTCACCATCAGCCGGCGCAACCGGTGGACGGGCAACCCCGTCGCCGGACGGGGCGTGCCCACGCTGCGCTACGCCGGCGCGATGCCCGGCAGCCTGTCCGTGGACCTCTTCTTCGACACCACGTCGACCGGGACGTCGGTGGCCGAGCACACGAGCAAGATCCTCGCGATGATGGACATCGACACGTCGCTGCCCGGCACGGACGAGTCCACCAACAACGCACGCCCGCCGTACCTCACCTTCCACTGGGGCGACACGCACTCCTTCAAGGCCGTCGTCGCGGACCTCGCGCTCACGTACACGTACTTCTCGACGACCGGCATGCCGCTGCGCGCCTCGCTCGCCCTCGTGCTGCAGCAGTACGAGGCGGTCGACTCCTACGGCCCGCAGAACCCGACGTCGGGGACCCCGCAGCCGCACCGGGTGCACCGGGTGCTCGCGGGCGAGACCCTCGACCGCATCGCGGCCCGCTACTACGGTGACGCCACGCGCTGGCGGACCCTCGCCTCGGCCAACACGGTCTCCGACCCGCTGTCGCTGCGGCCCGGGTCGCTGCTGTCCGTGCCACGGCTCGAGGACGTCTGATGACGCCTGCCGCCGCAGCGCCCCCGCGCCCGACCGGCGTCCACCTGCGTCCCACCGTCACCCTCGACGGACGCCCGCTGTCCCTGCGCCTGCAGGAGGCGCTCACCGAGGTACGGGTCGACCGGGCCGTGCGGTCCGTCGGCTCGTGCCTGCTGCGGTTCGCCGACCCCGACTACCAGGTCGCCCGGACCGGCGCGCTGGTGATCGGACGGGCCGTCACCGTGAGCGGCCGGCGCGACACCGCGCAGTCGCAGGGGACGAGGCTGTTCACCGGCGAGATCACCGGGGTCGCCCTCGAGAACGACGGGCGTGGCAGGGCCGAGCTGCTCGTGTCCGTCGCCGACCACGCCCACCGGCTGGGGCGCGCCAGCCGGACCACCGCGTACCTCGAGACCAGCTACCAGGAGATCGTCACGCAGGCCTGCCGTCGCAGCAGCCTCGCGACCGGCGAGGTCGGCACCGGCCCTCTGCGCCCCTACGTGCTGCAGGCCGGCACGGACCTGGACCTCGTCAACGAGCTGAGCGGACGGCTGGGGCACGACTGGGCCGTCGAGGGCACGGAGCTGAGCATGTGGGACCCCCAGACGCGGCTCGGCGGACCTGTCGCCACGACGCTGACGGTCGGCACCGACATCACCGAGCTCTCGGTCCGCCTGACGTCGTCCGCCGCGGAGAAGGTGACCGTGCGCGGCCGCGACCCCAAGCTCGACGAGCTCGTCACGGCGGACCGCACCCGCACCAGCCACGCACCGGCCGAGCTCGCACGGCTGTTCTCGTCGATGTCTCTCGGCTCGGTCACCACGCTCGACACCGCGAGCAGCCCGATCTCCTCGCAGGAGGCCGGCGAGCTCGCCGACGCCGTGCTGTCGACCGACGGCGACGTGGTGCTCCGCTGCCGCCTGCGCTTCGAGCCGGACCTGCGACCCGGGCGCACCGTGGCGATCACGGGCGCCGGCCCGAGCGACGGCACCTACTACGTCCGGGAGGTGGTGCACACCTTCACCGAGAGCGAGGCACGCACGCAGGTCGTCGCCGGCGACAAGCCCCGCACGAGCCTGCGCGACGCCCTCGGTCCCCGGGGGCGCGCGTCGTCGGGCTTCACCCACGACGGCCTGGTCATCGGCACCGTCTCGGACGTCGACGACACCGATAACCTCGGCCGGGTCAAGGTGACCTTCCAGATCCTGTCGTCCGAGGTGACCTCGGACTGGGCGCGCGTCGCGTCGGTCGGGGCAGGGTCGGGCCGCGGGATGCTCTCGCTCCCCGAGATCGGCGACGAGGTGCTCCTCGGCTTCGAGGGCGCCGACGTCCGCCGCCCCGTCGTGCTGTCCGGCCTGTACGGGCCGAAGTCGCCGCCCCCCGGCGCCGCCACCGCCCAGAAGGAGGGCAGCATCCTCAACCGGGCGATCACCTCGCGGCTCGGGCACGTCGTCGAGCTCGGCGACGGGACGGCCGACGCCGACCAGCACGTGCTGCTCGCGCTCGCCGGGCGCACCCACCGGCTGCGGCTCGGCAAGGACCGCGCCGAGATGGTCGTCCCCGACGGCGTCCCGCTGTCCATCACCTCAGGGGCCTCGACGATCAGCATCGACGCCTCGGGCGCGGTCAGCGTGACGGGCAAGACCGTGACCGTCACCGCCGACACCAAGCTCTCCCTCAAGGCCGCCGAGATCGAGATCGCCGCGACCGCCAAGGTCAGCGTCTCGGGCGCCCAGGCCGAGCTCGTCGGTCAGGGCACCACCACCGTCAAGTCCTCCGGGACCACCTCGGTGAGCGGAGGGATGGTGATGATCAATTGAGCCAGGGCACCCACGACGTCCCGTCGTTCATCGGTCGCGGCTTCTCGTGGCCGCTCTCCGTCGACCACACCGGGTCGATCCGTCTCACCGACGGCGCCGACGACCTCGACCGGTCCATCCAGGTGGTGCTGCTCACCGCCCCGGGCGAACGGCTCATGCGGCCCGAGTTCGGCTGCCGCATCTGGGACCTGCTGTTCGAGCCGGTCAACGCGAACCTGCTCGGTCTCGTGTCGCAGGCCGTCCGCGAGGCGCTCGCCCAGTGGGAGCCGCGGATCGCCGTCGAGGAGGTCCGGCCCGTCCAGGACCGCGGGGACTCGTCCCTCGTCCACATCGAGATCGTCTACCGGGTCATGGCGACCAACGACCGCCGCAACCTGGTCTACCCCTTCTACGTGATCCCCCGCGAGGACTCCTGATGCCGATCCCCCCGCCCAACCTCGACGACAGGTCCTTCCAGGACATCGTCGACGAGACCAAGCGCCTCATCCCCCGGTTCACCCCCGAGTGGACCAACCACAACGTCTCCGACCCCGGGGTGGCGCTCATCGAGCTCTTCGCGTGGATGAGCGAGATGGTGCTGTTCCGGGTGAACCAGGTGCCGGAGCGGCTGTACGTGCACTTCCTCAACCTCGTGGGCATCGAGCCCTTCCCTCCCTCGGTGGCGCGCACCGCCGTGACGTTCTGGCTGTCCGGCCCGACCGACCGCGAGGTCCCTGTGCCGGCCGGCACCGAGGTCTCGACGGCCCCGACGGCCGACGGCGCCTCCGTCGTCTTCACGACCACCGAGCCGGGGCTCGTCGTGCCGCCGGTGCTGCGGCACGTCCTCACGGGCCGGGCCGGCGAGGAGAACCTCCAGGACGGCTGGGACGACCTCGCGTACCCCGGCACCTCGCTCACCTGCTTCACGTCGACCCCGCTCGCGCAGGACGACGCGCTCTACCTCGGCTTCGCCAGCCCCGTCGCGTCGCACGTGCTGCGCCTCACGGTCCGCGCGCACGCCGAGGGCATCGGCGTCGACCCGCGCAACCCGCCGCTCGTGTGGGAGACGTGGGACGGCGAGGTCTGGGTGCCCGCGACCGTCCACGAGGACACCACCGGTGGTCTCAACCGCGACGGCACCGTGCTGCTCGTGGTCCCGGCCGAGGCCCAGCCGCTCACCCTCGCCGGCGCGTCGGCGAGCTGGCTGCGCGCCCGGCTGGTCCGCCCCCTGCCGGGGCAGCCGACCTACCAGGCGTCACCCCAGCTCGAAGAGCTCACCGTCACCGCGGCCGGCATCACCGTCCTCGCCGAGCACGCCTCGGCGACGCCCGGCGAGATCCTCGGGCGCTCGACCGGCGTCCCGGGCCAGACCTTCGCCGTGGCGCACTCCCCCGTCGCGCGCCGCCGCGGCGAGGAGCACGTGCGCGTCGTCGGCCACGAGACCTCCGAGGCCTGGACCGAGGTCACGGACTTCTCCGCGTCCGGCCCGACCGACAAGCACGTGGTGTGGGACTCGATCACCGGGGAGGTGCGGTTCGGCCCGACCATCCGCTACCCCGACGGCGCCCGGGTCCAGCACGGCGCCGTGCCGCCCGACGGCGCGCAGGTCCAGGTCACCCCGTACCGCCACGGCGGCGGCGCCACGGGCAACGTGGGCCCTGGCACCCTGACCTCGCTGCGGGCCACCGTCCCGTTCATCGCGCGAGCCACCAACCTGTCCCCCGCGACCGGCGGAGTCGACGCCGAGACCGTCGACGAGGCGAAGGTCCGCGGGCCGCTCACCCTGCGGACCGGCGAGCGAGCCGTGACGGCCGGCGACTTCGAGCGCATCACCCGCGAGGCCTCCGTCGAGGTCGCCCGCGCCGTCTGCCTGCCCCGCACCGACGGTGCCCCCGGGGCCGTCCGCATGCTCGTGGTGCCCCAGGTCCGCAAGGACCCGCGGGACCACCGTCTCGACGACTTCGCGCTGTCCGCACCGCTCGTCGAGACCGTCGCGCAGGCGATCGAGTCCCGCCGGCTCGTCGGGTCGTCGGTCGAGGTCGGCACCCCGTACTACCAGGGCGTCAGCGTCGCCGTGCTCGTCCGTGCGCTTCCCGGACGCTCCGCCCCGCTGCTGCGCCAGCGCGTCCTCGACACGATCACCCGCTACGTCAACCCGCTGCACGGCGGCCCGGAGGGCACCGGCTGGCAGCTCGACACCGACCTCACGGCGTCGGCGGTCGCGCAGCTGGTCGAGCCCATCGAGGGCGTCGAGCGCATCGACGAGGTCGTCCTGTTCGACTACGACCTGCGCAACGGCGCCCGCGTCGGGGCCGGGCGCGACACGCTGCGCCTCGCTCCCGACGCGCTGTTCCTGTCGGCCGAGCACCGCGTCGTGGTCCGGTGACCGCCCGATGAGGCGACCCGACTGGCTCGTGGGGCAGCTGCCGCCCGCGATGCTGCAGGAGGACTTCTTCCGGCGCTTCGTCGAGATGTTCCAGGCGCAGGCCGACACCCTCATGGCCCACGCGGACGACCTCGAGCACCTCGCCGACCCCGGGCTCGCCCCGCCCGAGCTGCTGCCGTGGCTCGCGTCGTGGATTGGCCTGGAGTCCGTGGACGGCGCAGGTCCTCCCGCGATGCAGCGCGAGGTGCTGCGCACCGCCGCACGCACCCTGGCGTGGCGCGGGACGCCCGCCGGGCTGCTCGCCATGCTCGAGCTGTTCAGCGGTGCACCCGCCGTCCTCGAGGACGGCGGCGGGGTGTGGCGCGAGGGCGAGAGCCCCGCGGACACCGCGTGGGTCGTCATGCGGGTAGCCTCGACCGGCAACCTCACCGAGCGGGCCTTCGCCGACCTCGTCGCCGACGAGGTCCCCGCGCACGTGCGCGCCGAGCTCTGGGTCGACGACCGGCTGGTCTGGCCGCGCCAGAGCGCGCCGACGACAGCGCCGCTGTCCGTACCGCAGCCCCCGACGGAGACCTGA

Protein sequences of DBSCAN-SWA_1

>NC_013521|2955872:2967969|2958621_2958795_+|WP_012867628.1|DBSCAN-SWA
MLRYPAEALWQEIAYLAYHLHWTVDDLLDLEHLDRVRMIRAVSSLNERAWEAVRESV
>NC_013521|2955872:2967969|2958796_2959258_+|WP_012867629.1|tail|DBSCAN-SWA
MEALGGEPTTVGLFLFEVDGVPIGTFREVSGLRLTVSVTEHVEGGQNGYTHKLPGVLRWPNLVFTRGLVESDALFTWVTRSSGEGFAANDSTLTRSTGAVTALNHSGDRLRAWDLDGVFAVGWEGPSFSVDSETQPTERLEIAHNGFRARTPS
>NC_013521|2955872:2967969|2963227_2965027_+|WP_012867632.1|plate|DBSCAN-SWA
MTPAAAAPPRPTGVHLRPTVTLDGRPLSLRLQEALTEVRVDRAVRSVGSCLLRFADPDYQVARTGALVIGRAVTVSGRRDTAQSQGTRLFTGEITGVALENDGRGRAELLVSVADHAHRLGRASRTTAYLETSYQEIVTQACRRSSLATGEVGTGPLRPYVLQAGTDLDLVNELSGRLGHDWAVEGTELSMWDPQTRLGGPVATTLTVGTDITELSVRLTSSAAEKVTVRGRDPKLDELVTADRTRTSHAPAELARLFSSMSLGSVTTLDTASSPISSQEAGELADAVLSTDGDVVLRCRLRFEPDLRPGRTVAITGAGPSDGTYYVREVVHTFTESEARTQVVAGDKPRTSLRDALGPRGRASSGFTHDGLVIGTVSDVDDTDNLGRVKVTFQILSSEVTSDWARVASVGAGSGRGMLSLPEIGDEVLLGFEGADVRRPVVLSGLYGPKSPPPGAATAQKEGSILNRAITSRLGHVVELGDGTADADQHVLLALAGRTHRLRLGKDRAEMVVPDGVPLSITSGASTISIDASGAVSVTGKTVTVTADTKLSLKAAEIEIAATAKVSVSGAQAELVGQGTTTVKSSGTTSVSGGMVMIN
>NC_013521|2955872:2967969|2962568_2963228_+|WP_012867631.1|DBSCAN-SWA
MSAPEKAFIEIEGGTRVPCLFNPAQLTISRRNRWTGNPVAGRGVPTLRYAGAMPGSLSVDLFFDTTSTGTSVAEHTSKILAMMDIDTSLPGTDESTNNARPPYLTFHWGDTHSFKAVVADLALTYTYFSTTGMPLRASLALVLQQYEAVDSYGPQNPTSGTPQPHRVHRVLAGETLDRIAARYYGDATRWRTLASANTVSDPLSLRPGSLLSVPRLEDV
>NC_013521|2955872:2967969|2965023_2965443_+|WP_012867633.1|DBSCAN-SWA
MSQGTHDVPSFIGRGFSWPLSVDHTGSIRLTDGADDLDRSIQVVLLTAPGERLMRPEFGCRIWDLLFEPVNANLLGLVSQAVREALAQWEPRIAVEEVRPVQDRGDSSLVHIEIVYRVMATNDRRNLVYPFYVIPREDS
>NC_013521|2955872:2967969|2958080_2958617_+|WP_012867627.1|DBSCAN-SWA
MTLQTRFTFTLPRGYVDGSGTLHREGTMRLATARDELEPLRDPSVDGPDDPRLTVVVLARVIESLGSLELVTTHEVENLFAADLAFLQDFYGVINFGTQEEYEELLALQRDALAPIRQAPAAPAATAAPTDAVPGEPGVPATGDDQAGSAPAPQQPAVSASVTYARRTAVEEIPQDVR
>NC_013521|2955872:2967969|2957604_2958084_+|WP_012867626.1|tail|DBSCAN-SWA
MAAGLFTNDPIIAQNFFLEIDGSVISSLTSVTGLDIEVAVSTTRQAGAGGVAEAIKAMGTRTLAPEITLVRVAPLDSPNDNMWKWFNEVRGSGLAATDRAAQRKNGSIVLYDSAKNEVARFNFFSAWPSRIATDGLSVDSSEVVKETITLQCERLERVK
>NC_013521|2955872:2967969|2965442_2967392_+|WP_012867634.1|plate|DBSCAN-SWA
MPIPPPNLDDRSFQDIVDETKRLIPRFTPEWTNHNVSDPGVALIELFAWMSEMVLFRVNQVPERLYVHFLNLVGIEPFPPSVARTAVTFWLSGPTDREVPVPAGTEVSTAPTADGASVVFTTTEPGLVVPPVLRHVLTGRAGEENLQDGWDDLAYPGTSLTCFTSTPLAQDDALYLGFASPVASHVLRLTVRAHAEGIGVDPRNPPLVWETWDGEVWVPATVHEDTTGGLNRDGTVLLVVPAEAQPLTLAGASASWLRARLVRPLPGQPTYQASPQLEELTVTAAGITVLAEHASATPGEILGRSTGVPGQTFAVAHSPVARRRGEEHVRVVGHETSEAWTEVTDFSASGPTDKHVVWDSITGEVRFGPTIRYPDGARVQHGAVPPDGAQVQVTPYRHGGGATGNVGPGTLTSLRATVPFIARATNLSPATGGVDAETVDEAKVRGPLTLRTGERAVTAGDFERITREASVEVARAVCLPRTDGAPGAVRMLVVPQVRKDPRDHRLDDFALSAPLVETVAQAIESRRLVGSSVEVGTPYYQGVSVAVLVRALPGRSAPLLRQRVLDTITRYVNPLHGGPEGTGWQLDTDLTASAVAQLVEPIEGVERIDEVVLFDYDLRNGARVGAGRDTLRLAPDALFLSAEHRVVVR
>NC_013521|2955872:2967969|2959254_2962569_+|WP_012867630.1|DBSCAN-SWA
MTGATVPEAGTTGGTGVGDLATPGLVDGSGPGDGTAAAGPSPVLTLPSSFDARFRTGFVGRVGADAILFVRAVARPGTLRGVGSTTPLTRRTAPVPVQPVRPGSVAAPRWWSPGQRSAQPLASAAPAAPGAPAQQQPTSSTTTTGQQAHAPSKRLVPPARGPAGAADQQRQPASATTPSGAATSAAAGTSPAAGSPLGGSAPSSPQPTRTGASAAQAAARPLVPAATAATAVGAAVAAPALAAPGYARPALPQRSDVTAPLPRRGLPTVVRRVPDEKTWNPGTFSRTAVPQAVPMRLPDEVRAAGSMVLPHDRRRRDLPRQAEPGRSEPAPGNSPGAGPRPPAAGTRAAAGSREPGRITLPPRASTPSPDSARTRSASTGGALAGAALLAGTATAVATSPSSRPLAVRRALAAREASDRFAELRRESRERLLRNRARAEAPAEESPDGSRRRRAGGLMLRRGPAGRSTVALAAVAPVVGAAAVAAALRASHDRSPSPAPASRQEAAEREPSRRRALPVVPVLRRTAARRTGEVRPAAQPRPAPALRPALTRRTALVPRPTPVARPVAVPKATAGRPSTALRPTSPTRPASQARTVVPARTAAVVGLSVPASRRRGVVPLVAPARTLRLAPPAVVGAARVLPVAAALLSTRTLLPAVGRLEPARTARPGLARAVPGRSTLVSPARVVPPRTVPVAVSRVVPARSTPLPAARVVPARSAPLAAARVVPARTALVSAPRAVPTRGTPVSAARAVPARRVLAPVALPTRPAPRVHASPPALTARRTAVPSAPRAVPSRRLLAPVPLPTSPAPRVQPAVPPFPARRAAAPGAPRSVPTRRVLAPVALPARPAPRVHPAAPAPAARRTVVPVAPRLVPGRRALVPVPLPLRPAPRALPTSPGRAVPAARAHTPVAPLRGRASLAPQAAPVAPPARRTHTAIPRIITAPAATTPPVVVPVAARRPASLAPAGPALVPTAVVRPAVAARPAPAAAPSPPPRPAVAEAASMAAQLEILRKLTGKPLGAPSEPRPEREPLPVPAPRAPAEPDPAPVVDQAAVVTEILARLDSRIAARLDDTLARTLEDRVLRRVEDRLLDESSRHSSSFTTGVF
>NC_013521|2955872:2967969|2967399_2967969_+|WP_012867635.1|tail|DBSCAN-SWA
MRRPDWLVGQLPPAMLQEDFFRRFVEMFQAQADTLMAHADDLEHLADPGLAPPELLPWLASWIGLESVDGAGPPAMQREVLRTAARTLAWRGTPAGLLAMLELFSGAPAVLEDGGGVWREGESPADTAWVVMRVASTGNLTERAFADLVADEVPAHVRAELWVDDRLVWPRQSAPTTAPLSVPQPPTET
>NC_013521|2955872:2967969|2955872_2957441_+|WP_012867625.1|tail|DBSCAN-SWA
MPTYTAPGVYIEEIPSSQKVLSSAPTAVAAFVGFTERAPLDDPTDPEGLAPRLVTSWTQFEKLYGGFVEGAVLPLSVYGFFLNGGSLAYVVRIPNVQPAGEPARLALPAVDRALGLPIAVESIEPDANISVAVETVEPDEDVDGPSAFTIRILEGDEVVESYEDLTIGGATDAATVINKTSTRVKVEVTLEAKTDLSSQLEILKPGLYPLEKAAPVSVPVSGRKFAGSENARTGINGLAIAEDVTIVAVPDLVTAATREDGTLDLDLWKAVQTALIAHCELHPNRMAILDAPPGFGPQQVKEWRTETAQYDSAFATLYYPWIKVENPVPGATQADVLIPPSGHVAGVWARTDDARGVWKAPANDTIRGVLDVERSITQNEQSILNPLGINAIRPFGTRGIRIWGARTLASDTDWQYINVRRLFNMIESTILEGTQWAVFEPNDVTLWEGVKRTLTGYLHGLWQSGALFGASADQAFFVNCDSTTNTPESIDAGKLVVEVGIAPVKPAEFVIFRISQNKQTGS

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012867625.1|2955872_2957441_+|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	2.5e-64	32.3
WP_012867626.1|2957604_2958084_+|tail	phage tail protein	NA	NA	NA	NA
WP_012867627.1|2958080_2958617_+	hypothetical protein	NA	NA	NA	NA
WP_012867628.1|2958621_2958795_+	hypothetical protein	NA	NA	NA	NA
WP_012867629.1|2958796_2959258_+|tail	phage tail protein	NA	NA	NA	NA
WP_012867630.1|2959254_2962569_+	hypothetical protein	NA	NA	NA	NA
WP_012867631.1|2962568_2963228_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_012867632.1|2963227_2965027_+|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_012867633.1|2965023_2965443_+	GPW/gp25 family protein	M4SKQ1	Cyanophage	1.2e-08	34.0
WP_012867634.1|2965442_2967392_+|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_012867635.1|2967399_2967969_+|tail	phage tail protein	NA	NA	NA	NA