CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_013592	Dickeya zeae Ech586, complete sequence	10 crisprs	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3,DEDDh,DinG,csa3,WYL,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f	0	41	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_013592_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013592_1

254420-254521

Orphan

Consensus_repeat	Method
GATGGTGGAACTCACCCTACGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013592_1

>merge|NC_013592|1|254420-254521|CRISPRCasFinder
GATGGTGGAACTCACCCTACGGGCTGTCGCAGGCGACGTTAAAAAACGCTTTCAGCGTTTTGTGATTCGTTCCCCCCGATGGGTGGAACTCACCCTACGGGC

>NC_013592|1|1|254420-254521|CRISPRCasFinder
GATGGTGGAACTCACCCTACGGGC	TGTCGCAGGCGACGTTAAAAAACGCTTTCAGCGTTTTGTGATTCGTTCCCCCCG
ATGGGTGGAACTCACCCTACGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_013592.1\|WP_012882965.1\|250000_254224_+\|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl\|CDD\|234794
NC_013592.1\|WP_012882964.1\|245864_249893_+\|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl\|CDD\|234749
NC_013592.1\|WP_012882969.1\|256742_258179_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NC_013592.1\|WP_012882959.1\|242464_243010_+\|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl\|CDD\|180161
NC_013592.1\|WP_012882957.1\|240661_241846_+\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|234596
NC_013592.1\|WP_012882966.1\|254625_255723_+\|DUF1176-domain-containing-protein	unknown	unknown	gnl\|CDD\|369032
NC_013592.1\|WP_012882961.1\|243590_244295_+\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
NC_013592.1\|WP_012882963.1\|245174_245540_+\|50S-ribosomal-protein-L7/L12	unknown	unknown	gnl\|CDD\|234671
NC_013592.1\|WP_012882962.1\|244610_245108_+\|50S-ribosomal-protein-L10	unknown	unknown	gnl\|CDD\|234632
NC_013592.1\|WP_012882971.1\|258950_259553_-\|thioredoxin-reductase	unknown	unknown	gnl\|CDD\|226602
NC_013592.1\|WP_012882972.1\|259565_260189_-\|hypothetical-protein	unknown	unknown	unknown
NC_013592.1\|WP_012882958.1\|242079_242463_+\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|235587
NC_013592.1\|WP_041164230.1\|255989_256172_-\|DUF1127-domain-containing-protein	unknown	unknown	gnl\|CDD\|227744
NC_013592.1\|WP_012882974.1\|261013_262447_+\|heavy-metal-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|273593
NC_013592.1\|WP_012882970.1\|258190_258958_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239026
NC_013592.1\|WP_012882968.1\|256408_256567_-\|DUF1127-domain-containing-protein	unknown	unknown	gnl\|CDD\|368980
NC_013592.1\|WP_012882960.1\|243158_243587_+\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661
NC_013592.1\|WP_012882975.1\|262493_263639_-\|2-iminoacetate-synthase-ThiH	unknown	unknown	gnl\|CDD\|236425
NC_013592.1\|WP_012882956.1\|238506_239457_-\|type-I-pantothenate-kinase	unknown	unknown	gnl\|CDD\|235466
NC_013592.1\|WP_012882973.1\|260345_261017_+\|heavy-metal-response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|130454

Protein	Function_ID	Function_description	E-value
NC_013592.1\|WP_012882965.1\|250000_254224_+\|DNA-directed-RNA-polymerase-subunit-beta'	gnl\|CDD\|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NC_013592.1\|WP_012882964.1\|245864_249893_+\|DNA-directed-RNA-polymerase-subunit-beta	gnl\|CDD\|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NC_013592.1\|WP_012882969.1\|256742_258179_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	4.45669e-134
NC_013592.1\|WP_012882959.1\|242464_243010_+\|transcription-termination/antitermination-protein-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	1.84053e-105
NC_013592.1\|WP_012882957.1\|240661_241846_+\|elongation-factor-Tu	gnl\|CDD\|234596	PRK00049, PRK00049, elongation factor Tu; Reviewed.	0
NC_013592.1\|WP_012882966.1\|254625_255723_+\|DUF1176-domain-containing-protein	gnl\|CDD\|369032	pfam06674, DUF1176, Protein of unknown function (DUF1176). This family consists of several hypothetical bacterial proteins of around 340 residues in length. Members of this family contain six highly conserved cysteine residues. The function of this family is unknown.	6.0257e-101
NC_013592.1\|WP_012882961.1\|243590_244295_+\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.75715e-142
NC_013592.1\|WP_012882963.1\|245174_245540_+\|50S-ribosomal-protein-L7/L12	gnl\|CDD\|234671	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed.	4.23661e-45
NC_013592.1\|WP_012882962.1\|244610_245108_+\|50S-ribosomal-protein-L10	gnl\|CDD\|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	1.75002e-68
NC_013592.1\|WP_012882971.1\|258950_259553_-\|thioredoxin-reductase	gnl\|CDD\|226602	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion].	3.20773e-47
NC_013592.1\|WP_012882958.1\|242079_242463_+\|preprotein-translocase-subunit-SecE	gnl\|CDD\|235587	PRK05740, secE, preprotein translocase subunit SecE; Reviewed.	2.90163e-39
NC_013592.1\|WP_041164230.1\|255989_256172_-\|DUF1127-domain-containing-protein	gnl\|CDD\|227744	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown].	9.96629e-05
NC_013592.1\|WP_012882974.1\|261013_262447_+\|heavy-metal-sensor-histidine-kinase	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	2.65647e-142
NC_013592.1\|WP_012882970.1\|258190_258958_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	7.49831e-86
NC_013592.1\|WP_012882968.1\|256408_256567_-\|DUF1127-domain-containing-protein	gnl\|CDD\|368980	pfam06568, DUF1127, Domain of unknown function (DUF1127). This family is found in several hypothetical bacterial proteins. In some cases it represents it represents the C-terminal region whereas in others it represents the whole sequence.	0.000119781
NC_013592.1\|WP_012882960.1\|243158_243587_+\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	3.93866e-91
NC_013592.1\|WP_012882975.1\|262493_263639_-\|2-iminoacetate-synthase-ThiH	gnl\|CDD\|236425	PRK09240, thiH, 2-iminoacetate synthase ThiH.	0
NC_013592.1\|WP_012882956.1\|238506_239457_-\|type-I-pantothenate-kinase	gnl\|CDD\|235466	PRK05439, PRK05439, pantothenate kinase; Provisional.	0
NC_013592.1\|WP_012882973.1\|260345_261017_+\|heavy-metal-response-regulator-transcription-factor	gnl\|CDD\|130454	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator. Members of this family contain a response regulator receiver domain (pfam00072) and an associated transcriptional regulatory region (pfam00486). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members encoded by genes adjacent to genes for encoding a member of the heavy metal sensor histidine kinase family (TIGRFAMs:TIGR01386), its partner in the two-component response regulator system. [Regulatory functions, DNA interactions].	4.7546e-106

>NC_013592.1|WP_012882965.1|250000_254224_+|DNA-directed-RNA-polymerase-subunit-beta'
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERRQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKNMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKVRITEHQKNAQGEWTQKTSLIDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRVLGLKPTVIFADQIMYTGFAYAARSGSSVGIDDMVIPAKKVEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTETVINRNGEEEKQVSFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRERVLGRVTAEDVLKPGTADILVPRNTLLNEKWCDLLEENSVDALKVRSVVGCETDFGVCAKCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGTLRLSNAKFVMNNAGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMAKGNGDDVAGGETVANWDPHTMPVITEVGGSIRFTDMIDGQTITRQTDELTGLSSIVVLDSAERTGGGKDLRPALRIVDANGNDVLIPGTDMPAQYFLPGKAIVQLEDGTQIGAGDTLARIPQESGGTKDITGGLPRVADLFEARRPKEPAILAEVSGVVSFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFEGERVERGDVISDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQMLRKGTIVNPGSSEFLEGEQVEMSRIKIANRQLEANGKIAATYSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRQAGEQPVTPQVSAEEASANLAELLNAGLGGSDDE
>NC_013592.1|WP_012882964.1|245864_249893_+|DNA-directed-RNA-polymerase-subunit-beta
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPISSYSGSSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYSTEEILDLFFDKVVYEIHNNKLQMELVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDGIERIEVPVEYIAGKVLAKDYVDESTGEVIAMANMELSLDLLAKLSQSGHKRIDTLFTNDLDHGPYMSETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAETLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGILSKADIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGVVTDEIHYLSAIEEGNYVIAQANTNLDDEGHFIDELVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGTVQYVDASRIVIKVNEEEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLTEELQILEAGLFARIHDVLVAGGVEADKLDKLPRERWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQRAYDLGNDVRQKVDLNTFSDEEVLRLAENLKKGMPIATPVFDGAKENEIKELLKLGDLPTSGQITLFDGRTGEQFERSVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMPESFNVLLKEIRSLGINIELEEE
>NC_013592.1|WP_012882963.1|245174_245540_+|50S-ribosomal-protein-L7/L12
MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAAPAEAAEEKTEFDVILKAVGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKSLEEAGAEVEVK
>NC_013592.1|WP_012882962.1|244610_245108_+|50S-ribosomal-protein-L10
MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLLRRVVEGTQFECLKDTFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPAAQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDQKEAA
>NC_013592.1|WP_012882961.1|243590_244295_+|50S-ribosomal-protein-L1
MAKLTKRMRVIREKVDVTKQYDINEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLIALKKAKPAQAKGVYIKKVSISTTMGAGVAIDQSGLNAVAN
>NC_013592.1|WP_012882960.1|243158_243587_+|50S-ribosomal-protein-L11
MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTESLEKGLPIPVVITVYADRSFTFVTKTPPASVLLKKAAGIKSGSGKPNKDKVGKVTRAQVLEIAQTKAADMTGANVEAMARSIEGTARSMGLVVED
>NC_013592.1|WP_012882959.1|242464_243010_+|transcription-termination/antitermination-protein-NusG
MSEAPKKRWYVVQAFSGFEGRVAQSLREHIKLHSMEDHFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMDDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKG
>NC_013592.1|WP_012882958.1|242079_242463_+|preprotein-translocase-subunit-SecE
MSANTEAQESVRGLEALKWLVVAVLLIAAIVGNYYYREFSLPLRALAVVVLIAAAGGVALLTTKGKATVLFVREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITGLRF
>NC_013592.1|WP_012882957.1|240661_241846_+|elongation-factor-Tu
MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGQARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPVIRGSALKALEGDAEWEAKIIELAEALDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEVERGQVLAKPGSIKPHTQFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVNLIAPIAMDDGLRFAIREGGRTVGAGVVAKVIA
>NC_013592.1|WP_012882956.1|238506_239457_-|type-I-pantothenate-kinase
MTNKAQSFATPYLQFNRQQWANLRDSVPLTLTEDEIIKLKGINEDLSLDEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTDGQKIPYIIGIAGSVAVGKSTTARVLQALLSRWPEHRKVELITTDGFLHPNKVLQQKNLMKKKGFPQSYDMHSLVKFVSEIKSGVPWVTAPTYSHLTYDIVPDCNKVIEQPDILILEGLNVLQSGMDYPHDPHRVFVSDFVDFSIYVDAPEDLLKSWYINRFLKFREGAFTNPDSYFHNYAKLTKEEAVNIASQLWLEINGLNLQQNILPTRERASLIMTKSANHAVECVRLRK
>NC_013592.1|WP_012882966.1|254625_255723_+|DUF1176-domain-containing-protein
MRFNSALSGIILVLLSGSAFSAGEMPSGYPTPVQKVFRHWQITCNNLNDCDIRNNDPYLRVTLKREAGAQGKISLDFDLADKRQALYLDGARFPLTQPAWQTDEEEGAYYVHTDQLDVVQQFILAAKNAKRLSLSERGGSQSNNQEESISLNGLNAALLLADERQGRLNNRSALLQVGTGDVSLVPPIPVGQEISPAYTQPPPLANAKVLINGVINAKKTLLEEEDCGLSKEARQLSEAEPLTNELALVMLNCGMGAYQSSSMLFVTPRNNPQAAQLLELPRPIRTVESREEKIRWFTEVDYDPESGMLYHSAKGRGIADCGESAQWVFDGKTFQLVAYNYQPECNGGQPGDWPSVWAMPGYPTE
>NC_013592.1|WP_041164230.1|255989_256172_-|DUF1127-domain-containing-protein
MAQPPRRPHTRLSLHVLLHHTRQHWRAWRQRRRARKALRRLDNNQLEDIGLTRRDVDNFW
>NC_013592.1|WP_012882968.1|256408_256567_-|DUF1127-domain-containing-protein
MTQHPTPRSLLQRLYRLVQSQYQRHQTRKILNALDDRRLRDIGLTRQDIRHL
>NC_013592.1|WP_012882969.1|256742_258179_+|PLP-dependent-aminotransferase-family-protein
MTRYQLLATLLTQRIEQGLYQSGERLPSVRALSQEHGVSISTVQQAYYLLEQQQLIVPLPRSGYFVRSGKTQPPIPAMSKPVQRPVEVKKWGAVLELVNARLDPETISLGSSVPDLTQSTLKPLWKQLQRIGQKQLVSAFTYDNLAGVPVLREQIARLMVDSGCQLSADEIVVTTGCTEALAVAVRALAHPGDIIAVESPVFHGILQILCGLDIKVIEIPTDFTSGINLEALELALDQWPIKAVITVPHCNNPLGFIMPLQRKRALLTLAQRYDIAIIEDDVYGELAYEYPRPATLKSMDTEGRVLLCSSFSKTLAPGLRVGWLAPGRYLDRALHMKYTSTGSSAVCTQLAVAEFIRQGHYQPHIRRMRGIYQRNLERFTCWVRRYFPDTICVSRPQGGFVLWVEMPESFDGVQLSQTLRKDKIHVAGGALFSASGKYRHGLRLSFAMPMTPHIEQTIATIGAAVEQTLVKREGEAAV
>NC_013592.1|WP_012882970.1|258190_258958_-|molybdopterin-dependent-oxidoreductase
MSDKPQRRATLMLEPSQKKQLVNLERRLMLRSGLTLGAVAMLTGCNMQDGDNIDKVLWAMSRWNDRVQAWLFSGQRLAPSYRPDQVTQPFPFNAFYPEYNVPDIDLDSYRLEVSGKVEKKGVWTLEQLRQLPQETQITRLICIEGWSAIGQWRGIPLRLFLQHIGADLNARYVGFKCADRYYSSIDMATALHPQTILALEFGDQTLPPDYGYPLRLRVPTKLGFKNAKHIAALFVSDTNPGGYWEDQGYNWFSGI
>NC_013592.1|WP_012882971.1|258950_259553_-|thioredoxin-reductase
MSPSRRPIHAWPVRLAHWINLLAMTGMFMSGWEIYNASPLFNFHFPATMTLGGWLGGAIGWHLAVMWLWAGNGLLYVMWSLASGHWRQRWLPLSRKSLWHDIHQTLTLRLRHTSHQYNAIQKLMYFGVIALGVLLVLSGLAIWKPVQLSWLTNLLGGFAIARYVHFLAMSGIALFVVIHVLMVLIVPRTLWAMLTGGKHE
>NC_013592.1|WP_012882972.1|259565_260189_-|hypothetical-protein
MTTLRFAGLLLSSLLLCSHVVNAADAPAKPQSPIRGTITAVSDTQLQLTDRKGQKIDASLTADTRVMSITKAEPGDIKPDSFIGTAAIPQPDGMLKALEVHVFDASLRGTGEGFRPWESADGKSGTMTNGTVGKLVNSNGRTLTVTYNGGQKTVVVPDDVPIVSIAPGDRSLLKPGAHIVLFSRLDDQGKRIAVAVSAGKDGTVPPM
>NC_013592.1|WP_012882973.1|260345_261017_+|heavy-metal-response-regulator-transcription-factor
MRILVVEDDGSTGDYLKKGLTEAGYAVDLARNGTDGLFNALEHSYDAIILDVMLPGLNGWQIIEMLRKKSDVPVLFLTARDQLHDRIHGLELGADDYLIKPFSFTELVLRIRTLLRRGVVREADHYAVADLRLDVLRRKATRQEVVIPLTNKEFMLLHLLVRREGEVLSRTLIASQVWDMNFDSDTNVVDVAVKRLRAKIDKPFDIKLIHTVRGIGYVCEPRS
>NC_013592.1|WP_012882974.1|261013_262447_+|heavy-metal-sensor-histidine-kinase
MNLWLQRWRAISLKTRCSLLFALVAALVVSLAGSYLYSALWQEMYRRSDLQVTGRVDYYRHLLGKNFTLPVLTSNTGLFENMLGSEQDVLLFSLPGQKPLISVNPAHISLPPLTPVAENSPLRVSSVQGGVTDDGVPMRAIAAQVRLNDGQLLQIAAAHVMLNEQRMLEHYLWRVVGAVIAAFILIAALGYLVLRRGLSPLWRMAAQASAIAPNTLSTRVSDADAPQEVRQLIRAFNAMLDRLNEGYQRLTQFSADLAHEIRTPIGALMGHCQVALYQPRSVEEYETLLSDNIAELERLSRMVENILFLARASHEQPVLNRVPVDVEAELRRVADYFDMLADERGIELRYEGQATLSVDALLFQRALSNLVANAVRYAHADSPITLSASTSPEGIVIAVTNLGPLLPPEQLERLFDRFYRVDATRSASSDSSGLGLSIVRAIMTLHGGEVIARCDPVNPTTGRICFSLIFPAVDRIA
>NC_013592.1|WP_012882975.1|262493_263639_-|2-iminoacetate-synthase-ThiH
MDTHAQPSFEHRWQQLEWHDLTLRINSKTDADVERALCADRLTRDDMMALLSPAASRWLEPLAQRAQQLTRQRFGNTVGFYVPLYLSNLCANDCTYCGFSMSNHLKRKTLNEQEIQRECEAIKALGFDHLLLVTGEHQRKVGMDYFRQMLPLIRPQFSSLMMEVQPLSQEDYAELKTLGLDGVMVYQETYHARTYAHHHLRGHKQDFAWRLATPDRLGRAGIDKIGLGALIGLSDSWRTDCYMVAEHLLYLQQTYWQSRYSVSFPRLRPCAGGIEPASLMDEAQLMQVICAFRLLAPDVELSLSTRESPFFRDHMIPIAINNVSAFSKTQPGGYADDHPELEQFTPHDNRRPQDVADALAQAGLQPVWKDWDGYLGRAVMD

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Crispr_ID: NC_013592_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013592_2

406152-406852

TypeI-E

I-E

Consensus_repeat	Method
AGTGTTCCCCGCGCCAGCGGGGATAAACCGGC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

11 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NC_013592_2

>merge|NC_013592|2|406152-406852|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
AGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTAATCCCCTCTTTCTGAAGGTTGAAGATGTGTGTTCCCCGCGCCAGCGGGGATAAACCGATGAAACCTGGTTTCTACTGCGTTGTCGTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTTTTTCAGCCGCAGAATTTACCGCGACCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGCGTAAACTTGCTGGTTCAATTGGCAGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAAGAGGATAATCGAATTGTTATCTATTATCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTAGGAAACTAGTAAAACAACTGAGCGAAGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGATTGACGACGAAAGGGCGCGACTGGCATCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTGGGATAACGGAGAATTTACGTGCATGAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCACCCCTTGAGATGGCTCAGGAATCCGTGCACGTGTTCCCCGCGCCAGCGGGGATAAACCGTCAGCTATAAAATAATTTTTAGTGCACCTTATGTGTTCCCCGCGCCAGCGGGGATAAACCGTAAACGCTGATGCATCTAAAGTTGCGGCAGATGTGTTCCCCGCGCCAGTGGGGATAAATCA

>NC_013592|2|1|406152-406305|PILER-CR
AGTGTTCCCCGCGCCAGCGGGGATAAACCGGC	TAATCCCCTCTTTCTGAAGGTTGAAGATG
TGTGTTCCCCGCGCCAGCGGGGATAAACCGAT	GAAACCTGGTTTCTACTGCGTTGTCGTGA
AGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTTTTTCAGCCGCAGAATTTACCGCGACCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGCGTAAACTTGCTGGTTCAATTGGCAGTGGTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGAGGATAATCGAATTGTTATCTATTATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTAGGAAACTAGTAAAACAACTGAGCGAAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATTGACGACGAAAGGGCGCGACTGGCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGGGATAACGGAGAATTTACGTGCATGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCCCTTGAGATGGCTCAGGAATCCGTGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTATAAAATAATTTTTAGTGCACCTTAT


>NC_013592|2|2|406153-406852|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTAATCCCCTCTTTCTGAAGGTTGAAGATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGAAACCTGGTTTCTACTGCGTTGTCGTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTTTTTCAGCCGCAGAATTTACCGCGACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGCGTAAACTTGCTGGTTCAATTGGCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGAGGATAATCGAATTGTTATCTATTATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTAGGAAACTAGTAAAACAACTGAGCGAAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATTGACGACGAAAGGGCGCGACTGGCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGGGATAACGGAGAATTTACGTGCATGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCCCTTGAGATGGCTCAGGAATCCGTGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTATAAAATAATTTTTAGTGCACCTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAACGCTGATGCATCTAAAGTTGCGGCAGAT
GTGTTCCCCGCGCCAGTGGGGATAAATCA

>NC_013592|2|1|406153-406852|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTAATCCCCTCTTTCTGAAGGTTGAAGATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGAAACCTGGTTTCTACTGCGTTGTCGTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTTTTTCAGCCGCAGAATTTACCGCGACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGCGTAAACTTGCTGGTTCAATTGGCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGAGGATAATCGAATTGTTATCTATTATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTAGGAAACTAGTAAAACAACTGAGCGAAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATTGACGACGAAAGGGCGCGACTGGCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGGGATAACGGAGAATTTACGTGCATGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCCCTTGAGATGGCTCAGGAATCCGTGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTATAAAATAATTTTTAGTGCACCTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAACGCTGATGCATCTAAAGTTGCGGCAGAT
GTGTTCCCCGCGCCAGTGGGGATAAATCA

>NC_013592|2|2|406397-406791|PILER-CR
	TAATCCCCTCTTTCTGAAGGTTGAAGATG
TGTGTTCCCCGCGCCAGCGGGGATAAACCGAT	GAAACCTGGTTTCTACTGCGTTGTCGTGA
AGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTTTTTCAGCCGCAGAATTTACCGCGACCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGCGTAAACTTGCTGGTTCAATTGGCAGTGGTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGAGGATAATCGAATTGTTATCTATTATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTAGGAAACTAGTAAAACAACTGAGCGAAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATTGACGACGAAAGGGCGCGACTGGCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGGGATAACGGAGAATTTACGTGCATGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCCCTTGAGATGGCTCAGGAATCCGTGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTATAAAATAATTTTTAGTGCACCTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013592.1\|WP_012883103.1\|404854_405778_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_013592.1\|WP_012883101.1\|403453_404191_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NC_013592.1\|WP_012883096.1\|397127_399881_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NC_013592.1\|WP_012883105.1\|406913_408593_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NC_013592.1\|WP_012883113.1\|417464_418286_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NC_013592.1\|WP_012883109.1\|411306_413445_-\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|236436
NC_013592.1\|WP_012883104.1\|405774_406068_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NC_013592.1\|WP_012883098.1\|400143_401679_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|187860
NC_013592.1\|WP_012883111.1\|414811_416353_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173868
NC_013592.1\|WP_012883108.1\|410740_411205_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|236853
NC_013592.1\|WP_012883114.1\|418278_419886_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NC_013592.1\|WP_012883095.1\|395790_396714_-\|aminoimidazole-riboside-kinase	unknown	unknown	gnl\|CDD\|236514
NC_013592.1\|WP_012883107.1\|410137_410590_+\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NC_013592.1\|WP_041164733.1\|393979_395593_-\|carbohydrate-porin	unknown	unknown	gnl\|CDD\|367007
NC_013592.1\|WP_012883110.1\|413832_414741_+\|homocysteine-S-methyltransferase-family-protein	unknown	unknown	gnl\|CDD\|376828
NC_013592.1\|WP_012883099.1\|401671_402391_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NC_013592.1\|WP_012883100.1\|402387_403446_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NC_013592.1\|WP_012883106.1\|409079_409655_-\|Ail/Lom-family-outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|185153
NC_013592.1\|WP_049779801.1\|416438_417437_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NC_013592.1\|WP_012883102.1\|404190_404838_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|215025

Protein	Function_ID	Function_description	E-value
NC_013592.1\|WP_012883103.1\|404854_405778_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.98182e-153
NC_013592.1\|WP_012883101.1\|403453_404191_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.57706e-45
NC_013592.1\|WP_012883096.1\|397127_399881_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.08839e-127
NC_013592.1\|WP_012883105.1\|406913_408593_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	3.71007e-101
NC_013592.1\|WP_012883113.1\|417464_418286_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.37637e-74
NC_013592.1\|WP_012883109.1\|411306_413445_-\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|236436	PRK09263, PRK09263, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
NC_013592.1\|WP_012883104.1\|405774_406068_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.56503e-64
NC_013592.1\|WP_012883098.1\|400143_401679_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	2.33429e-141
NC_013592.1\|WP_012883111.1\|414811_416353_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173868	cd08503, PBP2_NikA_DppA_OppA_like_17, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NC_013592.1\|WP_012883108.1\|410740_411205_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|236853	PRK11121, nrdG, anaerobic ribonucleoside-triphosphate reductase-activating protein.	3.48539e-115
NC_013592.1\|WP_012883114.1\|418278_419886_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
NC_013592.1\|WP_012883095.1\|395790_396714_-\|aminoimidazole-riboside-kinase	gnl\|CDD\|236514	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional.	0
NC_013592.1\|WP_012883107.1\|410137_410590_+\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	6.52182e-100
NC_013592.1\|WP_041164733.1\|393979_395593_-\|carbohydrate-porin	gnl\|CDD\|367007	pfam02264, LamB, LamB porin. Maltoporin (LamB protein) forms a trimeric structure which facilitates the diffusion of maltodextrins across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an antiparallel beta-barrel.	1.5019e-121
NC_013592.1\|WP_012883110.1\|413832_414741_+\|homocysteine-S-methyltransferase-family-protein	gnl\|CDD\|376828	pfam02574, S-methyl_trans, Homocysteine S-methyltransferase. This is a family of related homocysteine S-methyltransferases enzymes: 5-methyltetrahydrofolate--homocysteine S-methyltransferases also known EC:2.1.1.13; Betaine--homocysteine S-methyltransferase (vitamin B12 dependent), EC:2.1.1.5; and Homocysteine S-methyltransferase, EC:2.1.1.10,.	1.33002e-73
NC_013592.1\|WP_012883099.1\|401671_402391_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	3.39272e-19
NC_013592.1\|WP_012883100.1\|402387_403446_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	7.18541e-122
NC_013592.1\|WP_012883106.1\|409079_409655_-\|Ail/Lom-family-outer-membrane-beta-barrel-protein	gnl\|CDD\|185153	PRK15240, PRK15240, resistance to complement killing; Provisional.	3.81369e-37
NC_013592.1\|WP_049779801.1\|416438_417437_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.55629e-97
NC_013592.1\|WP_012883102.1\|404190_404838_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.35829e-59

>NC_013592.1|WP_012883104.1|405774_406068_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSRRVREMIWQQVVELAEQGNVVMAWATNTESGFEFQTFGENRRMPVDLDGLRLVSFHPVENQ
>NC_013592.1|WP_012883103.1|404854_405778_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MSFVPLNPIPLKDRTSMIFLQYGQIDVVDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAAKLAATVGTLLVWVGEAGVRLYAAGQPGGARSDRLLYQARLALDEELRLKVVRRMFELRFGEPAPSRRSVEQLRGIEGARVRQTYSLLAKQYGVKWDGRRYDPKDWARGDKVNQCISAATACLYGITEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFDGVVPKAFEIAARNPLEPDREVRVACRDIFRSQQTLAKLIPLIEDVLAAGEIEPPQAPPDAQPPAIPEPAPFGDAGHRGHGG
>NC_013592.1|WP_012883102.1|404190_404838_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MFFSRVTLQPAALPSAMAEKWLTSPVYASHQWLWQLFPHEQQRSFLFRQDSHADVSRYYLLSACAPRQDHNLFEVETKPWQPQLNAGMQLAFSLRANPVVTRQKKRSDVLMDAKYQAKAQGADAAEIWPRQQQAATDWLVRQGEQWGFEVNACRVDGYQRQRWYKPQQTEPVSFSSVDFDGLLRITDAERFAQAVRNGLGKSRALGCGLLLLRRA
>NC_013592.1|WP_012883101.1|403453_404191_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MTEYLVFQLYAPLASWGEPAVGEVRHTSPVPSRSALLGLLAAALGIRRDEEARLAQFNAHYRFAVRALSRREGWLRDYHTVQMPREERKRVRYTRRDELCSDPEQGLETLLTAREYRCDAYYHVAVSATEGAPVTLSQLAQALRTPVFPLYLGRKSCPLALPLAPHLLCGSLAEVWRQVDDTPLLNDPALEFINQPDGSCYWEPGEDVAESDAMMAVERSDQPTSRRRWQFTTRIQCHGVLKGGQ
>NC_013592.1|WP_012883100.1|402387_403446_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTNFIQLHFLTAYAPANLNRDDTGRPKTAQVGGVERLRVSSQSLKRAWRTSAVFENALGEHIGKRTRRLGREVYQQLINGGVTTKTAEDAAKEIAKQFGKPKNPEKNSPDPLEKFDIEQLAHISVPERARIDQLVATLIAETREPNSEELKLLRKAVASVDIALFGRMLASSPEFNVEAACQVAHALGVSAVTVEDDFFTAVDDLNTDDNSGSGHMGEQGFASALFYQYICIDRDRLLENLSGDEALVQRTLRALGETALTVSPTGKQNSFASRAYASYVLAERGPAQPRALSVAFFKPVRGDEPLETAITALKSQQEKFNRAYGAEGMSDYVLNVEAGVGSLPQLLDFISQ
>NC_013592.1|WP_012883099.1|401671_402391_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MDKGSRENGNKENGHKKNGHKNSTATLLVIDPPAAEKIEAWFTQLQNRYNDTHNGRADRAALRRAAAPYGALTCQGFMRLSNMLAGVIGDKQHRLLGVAIFAAVAAHADVNNDKKSFAAQLGEPVSPNNDRRYLSALRFERLLRAQTPEELCRLLIRAVTIRGSAGVNLPSLADGILLWMEEWHARQHNLSAHANPLKRNAVRWACEYNQTPLEPAPDEAPSAPQDANGNHPTDNKEPA
>NC_013592.1|WP_012883098.1|400143_401679_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MFSLIDTPWLPVVGADGHRTHISPRQLADDRIIDLACPRPDFQGAAWQLLIGLLQTAYPPPDDEGWEDIWREGLGDGWIQALDSLAPAFQFGTDKPAFMQDFSSLDADNNPISGLLIDAPGGNTLKLNKDHFVKRGTVNAICPHCAALALYTLQTNAPSGGVGHRVGLRGGGPITTLLMPYDAHRPVPLWRKLWANVIPGERGRCDASVFPWLKATRTSEGDKDKVTPENAHPLQAFWGMPRRIELDFSHTESGHCDLCGDSSDHLLTHYRTKNYGVQYEHWLHPLTPYRKSLKDGTLLSIKGQPGGLSYRDWLGLVIGAQDGLNQTLPARVVSLNQQRVPLRYKVGLWCFGYDMDNMKARCWYEHRVPVWKEINPAVKDYLPLGLQMAHDAQQLLRQSVKAAWFSRPKDVGGDFSFIDVSFWQETEQFFRQLYRSIAGGGCPVAALNAWRNQLYMYLIGTFDRLTFGNPDQQGDLTRAVEARSNMVKLFHGQKSMKQLKGLQPQEEPANG
>NC_013592.1|WP_012883096.1|397127_399881_+|CRISPR-associated-helicase/endonuclease-Cas3
MPEAVHLERLSAPYFHYWGKAQSSSENENDAPYHLLPYHCLDVAACGYWLVKHNRFHVRDHMQSLGLEEESAALWLAWFLAWHDIGKFARSFQRLYQNPDAPLVRASGQASPVRHDSLGLWLWRHRLYERWEHDASWLPAVSHADKFHYVMDLWLRLMCGHHGQPPLEEDNSALAFHPDDILAAQAYLTDLRTVFPQLTAFPDEFSDRPWRALLQQRSWSLAGCVVLADWAGSSQADFPYCSQPMALADYWREYALPQAENAVLRLPAACDVAPFQGMQALFPFITQPTPLQQQAMTVDISTPGPQLFLLEDVTGAGKTEAALVLTHRLLSAGYGDGLYVGLPTMATANAMCRRLSKAYRTLFSEFGLPSLMLAHGARNMVADFRLSLWGAEQTGPVRYGPDEGSASAACNQWFADSRKKALLADVGVGTLDQALMAVMPFRHQSLRLLGLSGKILLLDEVHAYDAYTSRLLENLLAFHASQGGSAIILTATLSASQRERLVQAFYRGMQQPAGELAEQAGYPWFTYVNAQVLHEWPVETRAEVRRTVAVAWLSHRADAIERICQAVASGQCVCWIRNTVDDAIAAWQQLCQSGEIAADDVLLFHSRFAFCDRMAIEDRAIERFGKHSDGETRRGKVLIATQVVEQSLDIDVDVMISDLAPVDLLIQRAGRLQRHIRRADGSCKPPSDDMPARDERAAPVLWVLAPAWQPDAGRDWLGAELRGTGAVYSHQAVLWRTQAILRERGALRMPEEARLLIDSVYEQRIAAPVALEEGDYQAQGKQLGDRTVAAQSSLTFSLGYCVAAAQCGWHDDAELFTRAGEESQDVYLAWRAESDDALPQPYAGEGEFSWERSRLSVRKRWWQQHQNGWPTLQGDLLERFRQQLHRPGAEVLLLTPGEVAHYYRADTGLVATDLIAR
>NC_013592.1|WP_012883095.1|395790_396714_-|aminoimidazole-riboside-kinase
MSHKVWVMGDAVVDLIPEGEDRYLKCPGGAPANVAVGVARLGGHSGFIGRVGDDAFGYFLRDVLARERVDVRHMQPDTEHRTSTVVVSLDEQGERTFTFMVRPSADLFLQPSDLPEFQRSEWLHLCSIALSREPSRSTAIDAIHRIRAAQGWVSFDPNIRVDLWSSEQALRESLDQVLALADVVKLSQEEFVFLSGSDDIRQGSGMLMARYPIKRLLITQGGDGVWLHDGHQLHHFLAQRVTPIDTTGAGDAFVAGMLAALAGYDSLYQVDDWHAVLTQAQRCGALATTAKGAMTALPFTHQLTSAL
>NC_013592.1|WP_041164733.1|393979_395593_-|carbohydrate-porin
MKPGYLAAAVGVALCASPVLAAPSDSIEARLNALEQRLLQAEQRAKQAEARADAAEKQAKQLAARTTQVEQKTQQVEQTTQQVAQQTQQVAARATQNEQQTQQVAQKTDALANKRSVADGFEFHAYARSGLAIHNSTTSSKADIGPSMTPAGETGGNVGRLGNEDDTYLELKLEHRTKLDNGATTRFKVMMADGQRSYNDWTAATSQFNVREAFVELGSLPTFTGAFKDTTLWAGKRFDRDNFDIHWIDSDVVFLAGTGGGIYDVKPVDGWKTNLSLYGRSLGEITSLDNEIQNYIVTSNNFVGPFQFMLSGLRARNNDVKENTGLNNSNHVTNTNAGDSGYHALVAWHGDSFYGLRDGTSKVALLYGHGLGGEVKAIGSDGNLTQNANTWRLATYGTTALNHTWSFAPAILAQSSKDRYVQGDDYRWLTFNARFIQEITENFALAYEGSYQYMNLDPQGYLSRNQVSGGFYKLTFAPTFKVGDIANLLSRPELRVYASYMDWDKRLDRYSSDDAFGSTGFKAGGEWTFGVQMETWF
>NC_013592.1|WP_012883105.1|406913_408593_-|HAMP-domain-containing-protein
MKNYKIGTRLSVGFGILIAFSLIMLASGIYQLNQITRNAEQIMLVPLRKERLVADWAATLAAGIQRTTATARSSDPSLAQVFAADNANATKENNERVAKFTELVSSKEEQGLLDQLNADRQAYIKARDEIFSAKASGNAEQAKQVFEQRLLPVSVQYQKSMSILRDYQRTNIDRMREEISARAQSSYLFLGVLGLMITLIGSLLAWMLTRSIVRPLQTAVQVTNAVARGDLTAEISPQGRDELAQLQHALREMTGQLRTVVGEVREGAEAIAGASSQLSAGNQDLSGRTDEQSSALQETAASIEQLTSTVRQNADNARQANQLAQDTASQAQSGGQLVSEVVQTMGAIDSSSKKIVDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSASAAREIKELIGHSVETVDAGNRLVEKAGVSIQGIVDGVRKVSELVGEISVASQEQSLGIEQVNQAINKMEQTTLQNASLVREGYNATQSLQQQAEQLKQVVSIFHLEEARGGSYNLAGNRPMISPSSAPAAKTLALKKPAAAKTSASADDWQSF
>NC_013592.1|WP_012883106.1|409079_409655_-|Ail/Lom-family-outer-membrane-beta-barrel-protein
MKKIVLSALLASGLLCGLTAHAGMNTFSVGYAQSKIQGLKNIGGVNVQYRYEVDSVLSLIGSFSYLDGDADVSNRISDDVIRNHADSKYYSFLVGPAYRINPVVSVYALIGTAHVKTDVSSEWFNFESGKGLISQGTQKSTFSSNAFAYGAGVIINPVENLSVNLGYEGTKADINGNRAINGFTVGVGYRF
>NC_013592.1|WP_012883107.1|410137_410590_+|YhbP-family-protein
MEAENTLGVISRYLKKLHVLTLCVSDDDDLWCANCFYVFDDEKIAFYLMTEPDTRHGEIMRRCPRVAGTVNGQPKSVLLIRGVQFLGEISRLSGDEETQARNRYNVRFPIARSSGAPVWKLSLNEMKMTDNALGFGKKHLWRRDTVAEAC
>NC_013592.1|WP_012883108.1|410740_411205_-|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MNYHQYYPVDVVNGPGTRCTLFVAGCEHQCPGCYNQSTWRLNSGHPFTQEMEDRIIADLQNTNLPLQGLSLSGGDPLHPQNVPDVLRLVQRVHNECPGKDIWMWTGYQLDELTPEQHQVVDLINVLVDGRFIQEQRDLTLVWRGSRNQVIHHLR
>NC_013592.1|WP_012883109.1|411306_413445_-|anaerobic-ribonucleoside-triphosphate-reductase
MKPVVIKRDGCQVPFDENRINDAVIKAASAAGVDDADYCATVAAAVAQQMQGKARVDIREIQNAVENLLMAGQYKQLARTYIEYRHDRDVARERQGRLNQEIRGLVEQSNMALLNENANKDSKVIPTQRDLLAGIVAKHYAKQHILPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDLNGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVTASHEKHCAVAREWQIPDAEGYARSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWQSRLIQQSILRNRIAGLGKNHKTAVFPKLVFAIRDGLNHKPGDANYDIKQLALECASKRMYPDILNYDQVVEVTGSFKTPMGCRSFLGVYEENGEQVHDGRNNLGVISLNLPRIALEAHGDEARFWQLLDQRLLLAKKALMTRIARLENVKARVAPILYMEGACGVRLKADDNIAEIFKNGRASISLGYIGVHETINALFSNQVHVFDDETLRQKAVAIVARLKAATESWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVAGVTDKGYYTNSFHLDVEKKVNPYQKIDFEAPYPPLANGGFICYGEYPNLQHNLKALEDVWDYSYTRVPYYGTNTPIDECYECGYTGEFTCTSKGFTCPQCGNHDAARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLASGQLG
>NC_013592.1|WP_012883110.1|413832_414741_+|homocysteine-S-methyltransferase-family-protein
MADNVLILDGGMGRELARIGAPFRQPEWSALALIESPQHVRQVHDSFIAAGAQVITSNSYAVVPFHIGEAEFSARGQALAALAGQLARQAADAASHPVRVAGSLPPVLGSYRPDLFNAEAATPILKTLIDALNPYVDVWLAETQSSLAEVALVRELLASDPRELWLSFTLQDELDADGHARLRSGETVAAAAQEAARLGAANLLFNCSRPEVMAPAVAQASATLSALSAPIGVGVYANAFEPDDNQRGANEGLSRLRTDTHPEGYLQWAQEWVAQGASLVGGCCGIGPEHIARLAQAFHRQA
>NC_013592.1|WP_012883111.1|414811_416353_+|ABC-transporter-substrate-binding-protein
MNRRHFIKSACALSVAAAATGWPLSAAWGADAAEQPKKGGHLIVGVDNASSTDRLDPAFWFETYMYFVGSQLFNNLLELDEKGELVPSLAESWESKDGGRTWVLAIRKGVQFHDGRTLSAKDVIYSLNHHRGEKSSSSVKGYLDPVVAMDATGSHEVTLRLNEPNVEFIALLSDVHFAITPENENFDKGIGTGAFILESFQPGVRTLVKRNPNHWNSARGHVDSVETLAMNDSTARVAALVSGSAHIINRVNPRIVGRIQNMPTLQLLRSRDSQIFTFPGLSNVAPFNNEDGRLALKYAIDRQQIIDTVLGGYASVANDNPIFPSNRYFAKDIPQRPYDPEKAKWHWQKAGFSGPLTLSVADAGFPGAVDAGQLYQASAQKAGITLNVERVPDDAFWDNVWMKKPFVSSNWSVRPTADALLSLVFTSQAPWNESGWKNDAFDQLVRAARGEANEDKRRQIYHDIQVMLVDQSSEIIPLYADALDACSTKVKGLNAIPGFPLSGNRAAEKVWLA
>NC_013592.1|WP_049779801.1|416438_417437_+|ABC-transporter-permease
MFCRWTVLEQWAGRYPLLMLILRRLLAGVAMVAVVSVLIFAGIQLLPGNAATAILGQTATPEAVRALNAQLGLDQPAVSRYLNWLWGMVGGDFGQSFTSRQAIAPVLAWRLENTLFLAGCTAVVAVPLALLIGFLSVRYQGSWLDRLLNLFTRVAVALPEFFSGYLLILIFSITLFWLPSNSNVSDHMPLGAHLTAIALPCLTLVLAVLGHMSNMTRAALIGAQNAAYVDTALLKGMSPSVILLRHVLPNAWGPIINVIVLNLAYLMVGVVIVESVFVYPGLGQYMVDSISKRDMPVIQGCALVLATIYILLNLLADVVSLMANPRLRHARR
>NC_013592.1|WP_012883113.1|417464_418286_+|ABC-transporter-permease
MPAVKPSVVLGLLGLGLFIGVALFAPWIAPYPADKVVAGAWLGPMPQAWLGTDNIGRDLFSRLIWGTRTSLAVTALAAALAFALGAGLGFLAGVCGGWVDQLISRVNDVLMAIPTLILALVVLAMLPKSTFIIILVLGVLEATRVLRVARSLAVDIATQEFIEVARLRGESMGWILWREILPNARNTLVAEFALRFIFILLFLSALSFLGLGIQPPTADWGGLARDNKDGILFGVWAALVPGAAIALLAVSLNVVADWLLSRDGRNWRGGRHE
>NC_013592.1|WP_012883114.1|418278_419886_+|ABC-transporter-ATP-binding-protein
MSELLRVEQLCVTAGGRALVEDINFTLHKGEVLGLIGESGAGKSTIGQAILGHCRHGMRIEIGHIWFQNGDKRSDLASLSERQLRAVRGARIAYVAQSASASFNPAQRIGEQVIETAVRHGVLSRQQAVARAIELFTQLSLPEPQTFFQRYPHQVSGGQLQRAMIAMAMCAGPDLIIFDEPTTALDVTTQLGVLNAIDEIIRLTGVAALYISHDLAVVAQISHRIMVLRHGRQVETGDTASLLASPVEAYTRDLLQARGEPKVPQAATDDILLDIRHLGARYQQQPVLQDVSLQLARGRTLAVIGESGSGKSTLGRTLCGLLAPAGGEIRLNGDALPAKLVQRNRAQLQSIQMIHQHPDTALNPRLPVGVQIERSMVCLTQLDAAARRLRVSDLLHQVGLPAEMAQRYPTALSGGQKQRVCIARALAAQPSLIICDEPTSALDPLVARDVLALLRQIQQETGVAYLFITHDLHVVREVADSVAVLRHGHIVRQGPVTEALSPPLDDYTQQLLLAVPEMRCGWLRDVMARESSALS

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Crispr_ID: NC_013592_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013592_3

682808-683264

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAAC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

7 spacers

The CRISPR arrays of NC_013592_3

>merge|NC_013592|3|682808-683264|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGATGATACCATTGATGTTTTGCATATATGTCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCGAGTGGGCATGTATCAGGGTTCCACAACTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTGGACGAACAAAACGCTATGTTTTGGATATGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTTGCCAGAGCAGATAATGGCATTGAGAGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCCGCCATGGATATCACCTTTTTCGTTGACCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGTCCGAGCGCTTCCACGGCTACGCCATCTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATTTCGGACTATGAAGGCAGCAGCCGCGAGTGTTCCCCGCGCCAGCAGGGATAAACGT

>NC_013592|3|3|682808-683262|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGATGATACCATTGATGTTTTGCATATATGTCGG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTGCGAGTGGGCATGTATCAGGGTTCCACAACT
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGCTGGACGAACAAAACGCTATGTTTTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCCTTGCCAGAGCAGATAATGGCATTGAGAGAG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGAGCCGCCATGGATATCACCTTTTTCGTTGACC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTGGTCCGAGCGCTTCCACGGCTACGCCATCTTT
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGGGATTTCGGACTATGAAGGCAGCAGCCGCGA
GTGTTCCCCGCGCCAGCAGGGATAAAC

>NC_013592|3|3|682808-683264|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGATACCATTGATGTTTTGCATATATGTCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGAGTGGGCATGTATCAGGGTTCCACAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGGACGAACAAAACGCTATGTTTTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTGCCAGAGCAGATAATGGCATTGAGAGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGCCATGGATATCACCTTTTTCGTTGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGTCCGAGCGCTTCCACGGCTACGCCATCTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTTCGGACTATGAAGGCAGCAGCCGCGA
GTGTTCCCCGCGCCAGCAGGGATAAACGT

>NC_013592|3|2|682808-683264|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGATACCATTGATGTTTTGCATATATGTCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGAGTGGGCATGTATCAGGGTTCCACAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGGACGAACAAAACGCTATGTTTTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTGCCAGAGCAGATAATGGCATTGAGAGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGCCATGGATATCACCTTTTTCGTTGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGTCCGAGCGCTTCCACGGCTACGCCATCTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTTCGGACTATGAAGGCAGCAGCCGCGA
GTGTTCCCCGCGCCAGCAGGGATAAACGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_013592.1\|WP_012883361.1\|692782_693079_-\|DUF1435-domain-containing-protein	unknown	unknown	gnl\|CDD\|369291
NC_013592.1\|WP_012883360.1\|691302_692205_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176161
NC_013592.1\|WP_012883347.1\|677938_678958_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NC_013592.1\|WP_012883349.1\|679973_680972_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NC_013592.1\|WP_012883346.1\|675981_677856_+\|DEAD/DEAH-family-ATP-dependent-RNA-helicase	unknown	unknown	gnl\|CDD\|236941
NC_013592.1\|WP_012883359.1\|689095_690124_+\|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC	unknown	unknown	gnl\|CDD\|181902
NC_013592.1\|WP_012883352.1\|682299_682602_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
NC_013592.1\|WP_012883345.1\|674916_675801_+\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|236875
NC_013592.1\|WP_012883344.1\|672668_674789_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NC_013592.1\|WP_012883351.1\|681809_682313_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NC_013592.1\|WP_012883350.1\|681291_681816_+\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NC_013592.1\|WP_012883348.1\|679076_679955_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NC_013592.1\|WP_012883355.1\|685710_686934_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NC_013592.1\|WP_012883353.1\|683456_684236_+\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387
NC_013592.1\|WP_012883358.1\|688501_688921_-\|DNA-polymerase-III-subunit-psi	unknown	unknown	gnl\|CDD\|180735
NC_013592.1\|WP_012883357.1\|688089_688533_-\|ribosomal-protein-S18-alanine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|181904
NC_013592.1\|WP_012883362.1\|693194_694100_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176142
NC_013592.1\|WP_107760761.1\|675909_675969_+\|protein-YrbN	unknown	unknown	unknown
NC_013592.1\|WP_012883354.1\|684296_685628_+\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NC_013592.1\|WP_012883356.1\|687027_687753_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275

Protein	Function_ID	Function_description	E-value
NC_013592.1\|WP_012883361.1\|692782_693079_-\|DUF1435-domain-containing-protein	gnl\|CDD\|369291	pfam07256, DUF1435, Protein of unknown function (DUF1435). This family consists of several hypothetical Enterobacterial proteins of around 80 residues in length. The function of this family is unknown.	5.97849e-26
NC_013592.1\|WP_012883360.1\|691302_692205_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176161	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 3. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.13059e-90
NC_013592.1\|WP_012883347.1\|677938_678958_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NC_013592.1\|WP_012883349.1\|679973_680972_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	1.70319e-112
NC_013592.1\|WP_012883346.1\|675981_677856_+\|DEAD/DEAH-family-ATP-dependent-RNA-helicase	gnl\|CDD\|236941	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional.	0
NC_013592.1\|WP_012883359.1\|689095_690124_+\|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC	gnl\|CDD\|181902	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC.	0
NC_013592.1\|WP_012883352.1\|682299_682602_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	1.39586e-40
NC_013592.1\|WP_012883345.1\|674916_675801_+\|lipoprotein-NlpI	gnl\|CDD\|236875	PRK11189, PRK11189, lipoprotein NlpI; Provisional.	0
NC_013592.1\|WP_012883344.1\|672668_674789_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NC_013592.1\|WP_012883351.1\|681809_682313_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	9.38738e-59
NC_013592.1\|WP_012883350.1\|681291_681816_+\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	7.12359e-63
NC_013592.1\|WP_012883348.1\|679076_679955_-\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NC_013592.1\|WP_012883355.1\|685710_686934_+\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NC_013592.1\|WP_012883353.1\|683456_684236_+\|deoxyribose-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	0
NC_013592.1\|WP_012883358.1\|688501_688921_-\|DNA-polymerase-III-subunit-psi	gnl\|CDD\|180735	PRK06856, PRK06856, DNA polymerase III subunit psi; Validated.	3.57746e-58
NC_013592.1\|WP_012883357.1\|688089_688533_-\|ribosomal-protein-S18-alanine-N-acetyltransferase	gnl\|CDD\|181904	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional.	7.32123e-111
NC_013592.1\|WP_012883362.1\|693194_694100_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176142	cd08451, PBP2_BudR, The C-terminal substrate binding domain of LysR-type transcrptional regulator BudR, which is responsible for activation of the expression of the butanediol operon genes; contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of BudR regulator, which is responsible for induction of the butanediol formation pathway under fermentative growth conditions. Three enzymes are involved in the production of 1 mol of 2,3 butanediol from the condensation of 2 mol of pyruvate with acetolactate and acetoin as intermediates: acetolactate synthetase, acetolactate decarboxylase, and acetoin reductase. In Klebsiella terrigena, BudR regulates the expression of the budABC operon genes, encoding these three enzymes of the butanediol pathway. In many bacterial species, the use of this pathway can prevent intracellular acidification by diverting metabolism from acid production to the formation of neutral compounds (acetoin and butanediol). This substrate-binding domain has significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.69224e-67
NC_013592.1\|WP_012883354.1\|684296_685628_+\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NC_013592.1\|WP_012883356.1\|687027_687753_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	1.22541e-173

>NC_013592.1|WP_012883352.1|682299_682602_-|GIY-YIG-nuclease-family-protein
MNNSETIWFVYLLRTGSGWLYTGITTDVDRRLAEHQNGKGARSLRGKGPLMLVYHCVAGDRSTALKWEYRIKQLSKLQKERLVQHQPSTLTDFLPCVKND
>NC_013592.1|WP_012883351.1|681809_682313_+|N-acetyltransferase
MLIRVEIPVDAPGIDALLRRSFPTSAEAELVHQLREDGQLTLGIVATDDEGGVIGYAAFSPVTLGGEDLQWVALAPMAVDENHRCQGIGEKLVYEGLDALNEFGYTAVVVLGNPRYYARFGFVPAAAQQLYCRWLGYESDFQVYPLADNHFQGASGLVEYAEPFNRF
>NC_013592.1|WP_012883350.1|681291_681816_+|SCP2-domain-containing-protein
MLEKLRAQIVRQGPRLLSKPLTLTPFFLQRRVLEQLLGWQFRQALEEGELDFLEGRWLRVEVRDIGLQWFVTLRDNRLEISHNELADVSFSADANDLILIAARREDPDTLFFQRRLRIEGDTELGLYVKNLMDAIELENMPAPLRVALLQLAGFVAAGLQEGAEPVSPHAPVSC
>NC_013592.1|WP_012883349.1|679973_680972_-|U32-family-peptidase
MELLCPAGNLPALKAAIDHGADAVYIGLKDDTNARHFAGLNFNDKKLQDASDYVHRHRRKLHIAINTFAHPDGYPRWQRAVDTAVQTAGADALILADLAMLEYAAERYPSVERHVSVQASATNEEAIRFYQRHFDVARVVLPRVLSIHQVKQLSRTSPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTKNGMESRLNDVLIDRYQDNENAGYPTLCKGRYLVDGQRYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVTQVWRQAIDRCKADPAHFTPTAEWMEALGAVAEGTQTTLGAYHRQWQ
>NC_013592.1|WP_012883348.1|679076_679955_-|U32-family-peptidase
MKYSLGALLYYWPKADIETFYRAALDSSADIIYLGETVCSKRRGMKVGDWLTLAREVAASGKQVVVSTLALLQAPSELNELKKYVENGEFLLEANDLGAVNMAAERHLPFVAGHALNCYNAYTLRLLHKQGMMRWCMPVELSRDWLQNLLNQCDELGFRHHFEVEVLSYGHLPLAYSARCFTARSENRPKDECETCCIQYPQGRQMLSQENQQVFVLNGIQTQSGYCYNLGNDLASMEGLVDIVRLSPQGLDTLAIIDRFRANQHGEQPLTLENQQDCNGYWRRVAGLELVS
>NC_013592.1|WP_012883347.1|677938_678958_-|LLM-class-flavin-dependent-oxidoreductase
MTATVPFSLLDLAPIPQGNTARDAFHHSLDLAQHAEKWGYQRYWLAEHHNMTGIASAATSVLIGYLAAGTQHIRLGSGGVMLPNHAPLVIAEQFGTLESLYPGRIELGLGRAPGTDHRTMQALRRHLNADIDDFPHDVQELQRYFAPAQPGQPVQAVPGQGLNIPIWLLGSSLYSAQLAASMGLPFAFAAHFAPDMLLQALQLYRDNFRPSAQLEKPYAMVCVNVVAADSDRDARFLFTSLQQQFINLRRGTPGPLPAPVASMETHWSAAEQFAVEQTLRLAIVGDTAKVRHGLQTLLRETQADELMINGQIFDHQARLRSFELVAQLQPDIVREARIQ
>NC_013592.1|WP_012883346.1|675981_677856_+|DEAD/DEAH-family-ATP-dependent-RNA-helicase
MAEFETSFASLGLSAPILNALSEMGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLNNIKADLKAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGGQRYDVQLRALRQGPQVVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAEHQTALFSATMPEAIRRITRRFMNDPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALIRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERIMKLTIPEVELPNAELLGQRRLAKFAAKVQQQLESSDLDMYRALLGKLQPQEELDIETLAAALLKMAQGERPLILPPDPVVERRPRREFRDRDERFERRGERNDRAPRGDDRPARRERREVGEMDLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGDLLSHFTRTRILNKPMNMQLMGEAQPHERRERRDGGERSDRGARGFGDRTGGGRGRPFSGERREGGERRGGNRDGQRAPRRFNDA
>NC_013592.1|WP_107760761.1|675909_675969_+|protein-YrbN
MKMIEYFLDKLCRLAAILK
>NC_013592.1|WP_012883345.1|674916_675801_+|lipoprotein-NlpI
MKPFLRWCYVATAIMLAGCSNTDWRKDALLAVPLQPTLQQEVILARMEQILASRAITPDERAQLLYERGVLYDSLGLRALARNDFSQALSIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRYQLAQDDLLAFYRDDPNDPFRSLWLYLVEREINPEKAKLALKERYEGAKKGVWGWTIVEFYLGNISEKALMQRVQEEAKDNTSLAEHLSETDFYLGKHYLSLGDKNIAEALFKLTVANNVHNFVEHRYALLELAQLGQEQDDLSGSDQQ
>NC_013592.1|WP_012883344.1|672668_674789_+|polyribonucleotide-nucleotidyltransferase
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKHAKPGQDFFPLTVNYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPDGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTTEELKTSRLDLVVAGTEGAVLMVESEADLLSEDQMLGAVVFGHDQQQIVIENIKSLTAEAGKPKWNWQAPDVNVELHNRVQALSEARLGDAYRITEKQERYAQVDTIKADVVTALLAEDETLDENELRDILGSIEKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTERDAQTIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKPEAFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENYVVLSDILGDEDHLGDMDFKVAGSREGVTALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQAISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIASTDGEKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATAQPQETTPVSEAE
>NC_013592.1|WP_012883353.1|683456_684236_+|deoxyribose-phosphate-aldolase
MTDLTVAAQRALGLMDLTTLNDDDTDEKVTALCRQANSPAGKTAAICIYPRFIPLARKVLREQGTPDVRIATVTNFPHGNDDIDIALAETNAAIAYGADDVDVVFPYRALMAGNRQVGFELVKACKAACAAAGVLLKVIIETGELRTDALIREASEIAIDAGADFIKTSTGKVAVNATLHSAEVMLSVIRDKGVGEQVGFKPAGGVRTAQDAADYLQLADSIMGAGWADARHFRFGASGLLGSLLTTLGHAVGQARSSY
>NC_013592.1|WP_012883354.1|684296_685628_+|thymidine-phosphorylase
MFLIQEIIRKKRDGHPLSAEEIRFFINGVRDNTVSEGQIAALAMTIFFHDMTMDERVALTLAMRDSGTVLDWSGLHLNGPLVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLDKLESIPGLDIFPDDEVFRQIIRQVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYEQSEQLAKAIVGVANNAGCRTSALLTDMNQVLASSAGNALEVREAVRFLTGEQRNPRLFEVTMALCESMLLSGNLARDAAEARAKLQSALDSGRAAEVFGRMVAAQHGPADFVEHYDRYLQPATLSKPVFAEREGFVSTMDARALGMVVVALGGGRRQASDIIDSSVGLSDMVSLGDRVDAERPLAVIHARTESDWQQAAQALREAICLDSQAPAPCPLIYRRLDIADI
>NC_013592.1|WP_012883355.1|685710_686934_+|phosphopentomutase
MKRAFIMVLDSFGIGSTADAERFGDAGSDTLGHIAHACAQGKADTGRQGPLRLPNLSRLGLGKAAQGSTGQFPPGLDAQADIIGAYAYASEISSGKDTPSGHWEIAGVPVLFDWGYFLDEHNSFPQALLDRLVERAGLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTEGGYNIGRVIARPFVGDKVGQFQRTGNRHDLAVEPPAPTMLKKLVDEKGGHVVSVGKIADIYANVGITKKIKATGIDALFDATLSEMEQAGDNTIVFTNFVDFDSSYGHRRDVAGYAAALELFDRRLPEMLARVTGDDILILTADHGCDPTWPGTDHTREHVPVLMYGPGVKPGDYGHRTTFADIGQTVTRYFGLSPMDYGTPLF
>NC_013592.1|WP_012883356.1|687027_687753_+|purine-nucleoside-phosphorylase
MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLENAVEVNNVRGMLGFTGTYKGRRISVMGHGMGIPSCSIYTKELITEFGVKKIIRVGSCGAVRADVKLRDVVIGMGACTDSKVNRMRFKDHDFSAIADFDLLRHAVDAAKARGINARVGNLFSADLFYTPDPHMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALAICTVSDHIRTHEQTTAAERQTTFNEMIEIALESVLLGDKAEA
>NC_013592.1|WP_012883357.1|688089_688533_-|ribosomal-protein-S18-alanine-N-acetyltransferase
MNMISTLTTADLPQAFDIECLSHAFPWSEKTFISNQGERYLNLKLCHDQQLVAYAITQVVLDEATLFNIAVDPAHQRHGYGRQLLEHLITELEQRGIVTLWLEVRASNARAIALYQRLGFNEVSVRRDYYPTANGREDAIIMALPLG
>NC_013592.1|WP_012883358.1|688501_688921_-|DNA-polymerase-III-subunit-psi
MTSRRDWLLQQLGITQWTLRRPSVLKGEIAVSLPPDARLIIIADPLPASDDPLLQDVLRSLNLSSQQTISLTPRQAQMLPEHTRCHSWWLGQPVTDALALDGVQLTSPSLAELSHNAGAKRALWQQICHHEHDFHPDHS
>NC_013592.1|WP_012883359.1|689095_690124_+|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC
MSALTPASEVILRHSDEFVARRVLFAGDLQDTLPAHFEAAAVTVHTTQYHHWQQLQPVLGDNVHFSLLAQADMVAGCDTLIYYWPKSKQEAQFQLSNLLSLLPVGCEIFVVGENRSGVRSAEGILEPIAAINKIDSARRCGLYHGRLDAASAFALEDWWLEYDVDGVPVRTLPGVFSREGLDSGSQLLLSTLEPHRKGKVLDLACGAGVLAASFARLSPKIRLTLSDVSAAALEASQATLAANGLEGQVIASNAYSDIQGRFDLIISNPPFHDGMQTSLHAAEMMIRGAAAHLNIEGELRIVANAFLPYPALLDETFGSHEVLAQTGRFRVYRAVLRRHKNR
>NC_013592.1|WP_012883360.1|691302_692205_+|LysR-family-transcriptional-regulator
MDQVQAMRVFVRIVEAESFSRAAEKLGLPRATVSQTLKRLEVRLGVRLLQRTTRQVQVTDEGLLYYQRCVQLLAELDETDALFSHQRQQPSGRVRIDMPHSLARQVVIPSLPAFYRRYPQISLVLSANDAAINVLREGVDCVLRAWQVDDDSLVARSLPSLPQVTCASAAYCAEFGVPDSLEALATHRMVGYFSLRTLQRYPLEFMQQGQLVTRTLPSLVEISGADAYIAACQAGMGIIQAPRYGLESLLSGGELIEILPQLPPPDMPLYVMYPSGRFLAPRIRAVIDWLSQCFHQPPFG
>NC_013592.1|WP_012883361.1|692782_693079_-|DUF1435-domain-containing-protein
MLTAMIAACGLWGISWYFGKRLSSAWGVLLPAALMPLLALPELNQTHLKYICALAMLLTVGMLFHRRMRHYLLLPSCIALAGGLAALSLTLKGWPHWH
>NC_013592.1|WP_012883362.1|693194_694100_-|LysR-family-transcriptional-regulator
MELRYLRYFVAVASTRHFTRAAESLGISQPPLSQQIQKLEREIGTPLFKRLTRGVEMTEAGEALYQDANHILELTDAAVERVRSIARGESGVINVGFSCAVTFHPAVLTLLRRYRQHYPKIRLQPREEHIHEILESLRSRTIDIAFVRLPDNIGEEFEGELLANEPMRLVLPENHPFSDQTRINLGQLQNEPLIIFPRELCPSLHDLIVRACYLSGYQPKINPLAPHLTATISMVASGFGVTFVPESMTSIQTGNVTYHDTNTPNLTTQIAVIWRKHDRSATLLNMLQLVRDYLRAAPESA

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Crispr_ID: NC_013592_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013592_4

3674323-3674626

TypeIII

Consensus_repeat	Method
TCCCTGACTGAAGGGATTAAGAC	CRT
CCCTGACTGAAGGGATTAAGACT	CRISPRCasFinder

4 spacers

cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6

The CRISPR arrays of NC_013592_4

>merge|NC_013592|4|3674323-3674626|CRT,CRISPRCasFinder
GCCCTGACTGAAGGGATTAAGACTTCACCTTCGCGTCCAGCGTCACACGCATTAACGTCCGTACGGACGTTCCCTGACTGAAGGGATTAAGACATATCAAAGTGAACCTTTGTTTTGTTTCGAATCGGTCCGTAAGGACCTTCCCTGACTGAAGGGATTAAGACACATCATTTTCGCTCCATGCTGGCTTATCCATGTCCGTAAGGACCTTCCCTGACTAAAGGGATTAAGACCGAAAGAACGAACGCAGTGGTATCTCTGACATCGTCCGTACAGACTCTCCCTGACTGAAGGGATATAAGCT

>NC_013592|4|3|3674323-3674625|CRT
GCCCTGACTGAAGGGATTAAGAC	TTCACCTTCGCGTCCAGCGTCACACGCATTAACGTCCGTACGGACGT
TCCCTGACTGAAGGGATTAAGAC	ATATCAAAGTGAACCTTTGTTTTGTTTCGAATCGGTCCGTAAGGACCT
TCCCTGACTGAAGGGATTAAGAC	ACATCATTTTCGCTCCATGCTGGCTTATCCATGTCCGTAAGGACCT
TCCCTGACTAAAGGGATTAAGAC	CGAAAGAACGAACGCAGTGGTATCTCTGACATCGTCCGTACAGACTC
TCCCTGACTGAAGGGATATAAGC

>NC_013592|4|4|3674324-3674626|CRISPRCasFinder
CCCTGACTGAAGGGATTAAGACT	TCACCTTCGCGTCCAGCGTCACACGCATTAACGTCCGTACGGACGTT
CCCTGACTGAAGGGATTAAGACA	TATCAAAGTGAACCTTTGTTTTGTTTCGAATCGGTCCGTAAGGACCTT
CCCTGACTGAAGGGATTAAGACA	CATCATTTTCGCTCCATGCTGGCTTATCCATGTCCGTAAGGACCTT
CCCTGACTAAAGGGATTAAGACC	GAAAGAACGAACGCAGTGGTATCTCTGACATCGTCCGTACAGACTCT
CCCTGACTGAAGGGATATAAGCT

Protein	Signature genes	Signature genes Name	Protein_function
NC_013592.1\|WP_012885873.1\|3680396_3681377_+\|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	unknown
NC_013592.1\|WP_012885867.1\|3674750_3675035_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NC_013592.1\|WP_012885858.1\|3664905_3665943_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|153232
NC_013592.1\|WP_012885856.1\|3663170_3663794_-\|FMN-dependent-NADH-azoreductase	unknown	unknown	gnl\|CDD\|224103
NC_013592.1\|WP_012885864.1\|3670793_3671558_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180993
NC_013592.1\|WP_041164569.1\|3672485_3673694_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NC_013592.1\|WP_012885869.1\|3675449_3675665_-\|hypothetical-protein	unknown	unknown	unknown
NC_013592.1\|WP_012885860.1\|3666250_3667687_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341267
NC_013592.1\|WP_012885861.1\|3667683_3668802_-\|cytochrome-c552	unknown	unknown	gnl\|CDD\|274974
NC_013592.1\|WP_012885868.1\|3675024_3675276_-\|prevent-host-death-protein	unknown	unknown	gnl\|CDD\|170091
NC_013592.1\|WP_012885874.1\|3681373_3683101_+\|DNA-repair-protein	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NC_013592.1\|WP_012885857.1\|3663958_3664732_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378924
NC_013592.1\|WP_049779825.1\|3671589_3672471_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|185333
NC_013592.1\|WP_012885863.1\|3668931_3670071_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368189
NC_013592.1\|WP_012885872.1\|3679659_3680397_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NC_013592.1\|WP_012885870.1\|3676791_3679224_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NC_013592.1\|WP_012885871.1\|3679248_3679647_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NC_013592.1\|WP_012885875.1\|3683097_3684030_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0091_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NC_013592.1\|WP_012885859.1\|3666010_3666232_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|223314
NC_013592.1\|WP_041164570.1\|3675657_3675852_-\|host-cell-division-inhibitor-Icd-like-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_013592.1\|WP_012885875.1\|3683097_3684030_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	2.53273e-09
NC_013592.1\|WP_012885867.1\|3674750_3675035_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	7.45225e-19
NC_013592.1\|WP_012885858.1\|3664905_3665943_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|153232	cd03138, GATase1_AraC_2, AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain. A subgroup of AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain. AraC regulators are defined by a AraC-type helix-turn-helix DNA binding domain at their C-terminal. AraC family transcriptional regulators are widespread among bacteria and are involved in regulating diverse and important biological functions, including carbon metabolism, stress responses and virulence in different microorganisms. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with typical GATase1domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	8.2393e-61
NC_013592.1\|WP_012885856.1\|3663170_3663794_-\|FMN-dependent-NADH-azoreductase	gnl\|CDD\|224103	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism].	6.57481e-72
NC_013592.1\|WP_012885864.1\|3670793_3671558_+\|SDR-family-oxidoreductase	gnl\|CDD\|180993	PRK07478, PRK07478, short chain dehydrogenase; Provisional.	1.87401e-152
NC_013592.1\|WP_041164569.1\|3672485_3673694_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.40403e-18
NC_013592.1\|WP_012885860.1\|3666250_3667687_-\|AMP-binding-protein	gnl\|CDD\|341267	cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) and similar proteins. This family includes D-alanyl carrier protein ligase DltA and aliphatic beta-amino acid adenylation enzymes IdnL1 and CmiS6. DltA incorporates D-ala in techoic acids in gram-positive bacteria via a two-step process, starting with adenylation of D-alanine that transfers D-alanine to the D-alanyl carrier protein. IdnL1, a short-chain aliphatic beta-amino acid adenylation enzyme, recognizes 3-aminobutanoic acid, and is involved in the synthesis of the macrolactam antibiotic incednine. CmiS6 is a medium-chain beta-amino acid adenylation enzyme that recognizes 3-aminononanoic acid, and is involved in the synthesis of cremimycin, also a macrolactam antibiotic. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	4.46527e-149
NC_013592.1\|WP_012885861.1\|3667683_3668802_-\|cytochrome-c552	gnl\|CDD\|274974	TIGR04091, hypothetical_protein, D-alanyl-lipoteichoic acid biosynthesis protein DltB. Members of this protein family are DltB, part of a four-gene operon for D-alanyl-lipoteichoic acid biosynthesis that is present in the vast majority of low-GC Gram-positive organisms. This protein may be involved in transport of D-alanine across the plasma membrane. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	4.89363e-52
NC_013592.1\|WP_012885868.1\|3675024_3675276_-\|prevent-host-death-protein	gnl\|CDD\|170091	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN.	2.0709e-07
NC_013592.1\|WP_012885874.1\|3681373_3683101_+\|DNA-repair-protein	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	5.47877e-08
NC_013592.1\|WP_012885857.1\|3663958_3664732_-\|alpha/beta-hydrolase	gnl\|CDD\|378924	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family. This family contains alpha/beta hydrolase enzymes of diverse specificity.	1.03916e-13
NC_013592.1\|WP_049779825.1\|3671589_3672471_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|185333	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada.	1.45443e-51
NC_013592.1\|WP_012885863.1\|3668931_3670071_-\|hypothetical-protein	gnl\|CDD\|368189	pfam04914, DltD, DltD protein. DltD is and integral membrane protein involved in the biosynthesis of D-alanyl-lipoteichoic acid. This is important in controlling the net ionic charge in lipoteichoic acid (LTA). This family is found in bacteria of the Bacillus/Clostridium group. DltD binds Dcp and ligates it with D-alanine. DltD does not ligate acyl carrier protein (ACP) with D-alanine. It also has thioesterase activity for mischarged D-alanyl-acyl carrier protein (ACP). DltD is thought to be responsible for discriminating between Dcp involved in the D-alanylation of LTA, and ACP involved in fatty acid biosynthesis.	6.01296e-12
NC_013592.1\|WP_012885872.1\|3679659_3680397_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	7.01576e-73
NC_013592.1\|WP_012885870.1\|3676791_3679224_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	1.09351e-89
NC_013592.1\|WP_012885871.1\|3679248_3679647_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	5.03074e-13
NC_013592.1\|WP_012885859.1\|3666010_3666232_-\|acyl-carrier-protein	gnl\|CDD\|223314	COG0236, AcpP, Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	2.34752e-06

>NC_013592.1|WP_041164569.1|3672485_3673694_-|MFS-transporter
MPLRSLQALCLVNFFMADVRDGLGPFLGIFLTEHHWKADDIGWIMTVGGLAGLVATMPCGLAADASRNKRAVLVACCVLITAATLLLWFFPNRYVVGFSQVITGVSATFIAPLLTGITLGLTGPSGFNHQMGRNEAFNHGGNMSAAMLAGALVIYWGTDVVFILMTGMAICATMAVLAIRHGDIDNRVARGLSGADDAASAPRLSVIITHPAVVTTGATLMLFHLANAALLPMLSMRVAAMPDGEMSAGVYAAATVIISQLVMIPVALFAAAKADKYGYAVLITLALIVLPLRAALASVSAGPFFMIPVQVLDGVAAGLLGVAVPGYIVRLLEGSGHTNAGLSVVMLLQGIGASFSPALAGNIAATYSYRTAFAVLGGIALLALLLWWLRRLLAWDRQRQYD
>NC_013592.1|WP_049779825.1|3671589_3672471_+|methylated-DNA--[protein]-cysteine-S-methyltransferase
MPDYTHSDAAHSNDEHSDYARIADAITFIANSVNSQPTLDEIAAHVHLSPFHFQRLFSRWAGVTPKRFLQVLTLERAKALLRESRPLLDVADAVGLSSSSRLYDHFVHLEAVTPGEYKQQGAGLIIEHAVHPTPFGNAFIAVTPRGICSLSFLDNKDAGEPLAALHHTWPHAVMHENPQRTQTVIDTLFAMKTPPDRPISLHVTGTNFQISVWKALLQIPPATVVSYSQVADAIGHHNAARAVGLAVGANPVAFLIPCHRVIQQSGKIGGYHWGETRKHAIHAWESARYERYE
>NC_013592.1|WP_012885864.1|3670793_3671558_+|SDR-family-oxidoreductase
MPDLSDKIAIITGASSGIGYATAKRFAQEGARVIVGARRQQALNTLVEEITLAGGHAVALAGDVKSEAFAKALVELAMDCYGGLDIAVNNAGTTGETGSLLDMSLAEWENTLHTNLTSAFVGAKHQIPAMLRRGGGSVIFTSTFVGYTLGLPGMAAYAASKSGLIGLTRVLAAEFGAQGIRVNALLPGGTDTPMGQAFTRDPESLAFVQGLHALKRLAQPEEIAASALYLASDAASFTTGIALLADGGASICRT
>NC_013592.1|WP_012885863.1|3668931_3670071_-|hypothetical-protein
MKKLKNTICLHLLMATLAILVLSVPPLVTSFDPPLNFQPLIKSLDGTPKELKEKMATISHALQGNAIFFIGASEVSTSEDEHYAVYNYFNNQLRRPVVAYGDIYIDNIAHFLLLSRFKNDLNANSKVVLQLAPDSFYGDGVPGAVFADNFPPSIFNPLMDDPEPRRFLVSYLQNLNIDEVSHLTFAQMRVYGWHPQIIWQEVSYQFAIFCEMIKKDWLARLGIEPQPVRPWPVKPSPDIVPNWDNELANAHELNKSRQQSAATFWMDKSVYDDDPTQDVWDDAPLFPAQMDAFQATIKLLKERHVQVVVIVDAINPWAIKNSEKFQSIDKQIRSMLDENQVPYLDMYAMPYQNGWNWDRLHPTDPAWVVMDRFIAESFK
>NC_013592.1|WP_012885861.1|3667683_3668802_-|cytochrome-c552
MYSSGTFFFCLFGLALLFVLINRLWHYRLTYLSAISALVLLGWGYIFQGDYIVPVAVFLSFYIIVTLKEKGWLKTWQAVTLTLLPLFLVKLHLNNHWGMIGLSFMTFRAVDVLLYRTKKDGQNFLHYFCYLFMPLVISAGPMYRWRAWVTDSNKPSFVITREQFLPAMEQIFIGIIQKFLFATLIDNLVIQSWSHRPFTLSVGVVMSVAYSAYLYFDFAGYSNMAIGAGRLFGLNIPANFNMPILAKNPQDFWRRFHISLSEWLRDVVFMPIYMNLMKIDFFRQNKTLAQNIGIFCTLFCMGAWNGLERHYIISGALFGAISVAHNMLQWSAKRSPTLSNWLQRPVIAFLGRILTLASAAVSLYIFSGMSPL
>NC_013592.1|WP_012885860.1|3666250_3667687_-|AMP-binding-protein
MNYHSELKELQDFLHAVLLKPANPHQLAISGSDEAMTWQQLSVAVSDWQQRYQHCQQPAGTPVVLYGHQQAEFAVAIYSCLLHNIPYVPVDCIYPQERLREICQQAKAPYYYDVATKQFITTGEEGQVLAEPELAYIMFTSGSTGKPKGVQIGRESLWHFMQWVRQDFSLPDVPVLMNHAVFSFDLSLIPLLANLATGGHIVLNAKEDIAAENWLERLKNNGVSVWVSTPSFAYQRLLSPQFNSDYLPALSVFVFIGEVLNKALVKQLRRRFPHAKILNSYGPTEATIATTVIEITDEILCSENDVLPVGAMMPDSHMEITAEGELIIWGKNVMRGYLGLPQENAAKLLHRESEQFRGYRTGDLGYEENGILYCQGRNDSQIKLNGYRIEINEIENRLLAMPDISEAVVLPLMKSGGGVLRIAAFCVTKLAPDAIKTSLSKVIPPYMVPSQIIIKDALPLNPNGKIDRKLLDTHARTN
>NC_013592.1|WP_012885859.1|3666010_3666232_-|acyl-carrier-protein
MEQEILALFEKVLSRKVGFNDELIESDILDSILAVDLVLEVQDVYGCMIPPTEVATVLKTPADLARYIEEHRG
>NC_013592.1|WP_012885858.1|3664905_3665943_+|helix-turn-helix-domain-containing-protein
MRISILALPGSMSSAIAGLADMFWMVNQALISRPQGNAAASPPGVTFETAIVSADGNPVRDAQGRLIYVDSSFEAVGQSDIVLATGMMLGPDKLPLAATSVGESAAWLKQQYLHGSLIGGACAGSFILGEAGLLDGRFCSTTWWLYHTFKQKYPKAKPVWGKALEEQDGIITTGGPLSWVELALHIIRHQAGPDIARMAADIAVADSQPLSQRIYAPQGFMNTVDPLLLRAEHLVRYENPAMTAEELARALNFSDRTLHRKIKELTNESPKNFITRVRIEMACLLLENPAANIKRVAQACGYSEDTAFRRAFSQQMGMTPVQYRKWAMVRNDKTAMPEAEKKDPG
>NC_013592.1|WP_012885857.1|3663958_3664732_-|alpha/beta-hydrolase
MTNSRTAWLRTLAIGLGLLLFAGVHSIAEAAKIKNIVLVHGAFADGSSWSAVTTRLQGMGYHVTAVQNPLTSLADDVSATERVLQRQQGDVLLVGHSWAGAVVTQAGNAPNVRGLVYLSALVPDSGESVADLLQRLHAPMEGMTADANGLIWLDNPKQYQEVMAGDVPLKKVQELTAVQQPMAAKAFGDNVQHAAWKDKPSWYLLTENDNALPHAVQEKIAGQIGAKVMSIASSHMSLISHPDAVAHFIDEAAKAIK
>NC_013592.1|WP_012885856.1|3663170_3663794_-|FMN-dependent-NADH-azoreductase
MNILHIDSSILADGSVTRQLSAEVIEQLTHRYPDADLSYRDVVAQEIHHLTGPIVAGFRQVDNAAVDNATLQEHQLSEQLVSEFLASDVIVIGAPMYNFSVSSQLKAWLDRIAQAGRTFKYTETGPVGLSAGRKVIIVSARGGFYGKPPFAGLDFQERYLQAFFGFLGIHDVYFIRAEGASKGDEIKNREIENARSSIQLVINSLAV
>NC_013592.1|WP_012885867.1|3674750_3675035_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSYKLEFEEHALKEFKKLGAPVREQFIKKLKEVLQNPHIPANRLHGMADCYKIKLRSAGYRLVYHVLEHEIVVLVVAVGKRERSQVYTSAKSRL
>NC_013592.1|WP_012885868.1|3675024_3675276_-|prevent-host-death-protein
MPVQPILANAAVSISEFKKSPNAALKAAHGEPVAVLTNGHISGYYVSPEIWETLADYLEDKELASIARSRMKGKRVKVTLDEL
>NC_013592.1|WP_012885869.1|3675449_3675665_-|hypothetical-protein
MFDSTPLTPEEITDQCRALTYAVIELENPAAKEALLFVLAERLEVLLATLEMPDDSDSDTPESPAQSGTMH
>NC_013592.1|WP_041164570.1|3675657_3675852_-|host-cell-division-inhibitor-Icd-like-protein
MATAPTLLHPQFTFLFLAVHRAGLSHPCRKAMVAADEHSARRRLGPDFILVFAGRLPVREVRHV
>NC_013592.1|WP_012885870.1|3676791_3679224_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MNWLAASCHVAAFALLHNLKPLAQRAGIQDFPSPALANKLFAPLPESLSNRVDLHENTLTPLLDFAARLARGVPETPVSRGETGLIPLTHLLADDNHSAPAARCYSPLAPLGVDSLMPVTAALPASERQAAYRQVYQALIEGLEAIPAAHRLQPSLWLDHLDSLWMTTCHALPDGDGDSGISLYDQGKTTAALAVALWQHHARQATPEQEIPLTPGDDARLLLIQADVFGIQNLIFAEGNQTQKMAAKLLRGRSLQVSLLAEAAALRVLEAFDLPPVCQLINAAGKSLIVAPNLPDAAERLAGLRQRLDEWFLTHTYAQTGIGLCSTVAGSAEFLGEQAYGTLQSRLAQAMEQQKYQRFSLCAGDAPPPVFDGYLDHIAQGTGGEPCPVNGLHPVETTLNGLDCSRLAADQITLGHWISHSECYARLLILRDSTATFPDNRCLHLTLFGYQVVAVRLKENSGEFGELAHNGSLRRCWDISLPPEGVPLFQGYARRFINGWMPLAQGEYQPECYPGVADALANGDIKTFDHLSCEDLYQDADQQLRGTCALGVLKGDIDNLGYLFRSGLPQPGFAKTIGLSRQIHLFFTLWLPHLCRQDSRFANTYTVFAGGDDFFLIGPWRSQQTLALTMAQHFARYSGHNPALHFSLGLVQAKPSYPVRALAAQAEAALEQVKQHPGKNAICLYNEVMGWPEYDALLTCSEELARWREHDGYPLSSGLLYRLLALSELSAKESATPQAALWRSRLAYFLRRNLVDKVKVPAQENPAAFRHQLYLTLFAILEQHLKRHRQRYRVALQRHLYHYRTVPRGE
>NC_013592.1|WP_012885871.1|3679248_3679647_+|type-III-A-CRISPR-associated-protein-Csm2
MTMPDFKRQLHKPEATFFDKDAEDFAKSLLILNDRGKPLSLNKPTQLRRFYDQLQQLEQRINGDEEKLALYLPEIRMISAHLAYAKGRELISDEFCKTMQHLIRSIDTCQHLKNGRLFFEATLGFLRAIRHD
>NC_013592.1|WP_012885872.1|3679659_3680397_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MQLNNIQTLRATLVCETGLHIGGGDTALQIGGIDSAVVRHPLTQQPYIPGSSLKGKLRSLLEWRAGVVGDTKGKVLSHQVYQDLKDAQKQAQALKILQLFGVSGGDKLSAEQAQQVGPTRLSFWDCKFDEHWLAQQGGRVQTEEKAENCIDRISGVALHPRFIERVPAGSRFDFRLTVRQLDGDSPDLLDTLLAGLKMLELDGLGGSISRGYGKVRFETLTLDGEDLQPRFEQLQPFKHTTQGAG
>NC_013592.1|WP_012885873.1|3680396_3681377_+|hypothetical-protein
MPSPVAPAAAWQWLRLRLFPDSAFATALRGDTLFGQLCWYLRESLGEAGLNDLLAGYHDQRPFAVISDPMLADHLPRPHLPEHLLGFAAADARARKQRKQQCWLPLAFAHQPLAEWGAHVTAAPERHRHRSDVQMHNSINRQTLTTGGDDAFAPFGSEQHWFDVDTAWDLYLLHDERLSAAQLTDALCAIGLLGYGKDASIGKGRFHLTPQPMPELPTPDGNPLRLTLAPCAPQQGHWHSADSFFSPLVRVGRHGAALVVQGHPFKNPLLLADSAAVLAPVTPDNRPFVGQGLGGNGRLSTALPQTVHQGYAPVIPVRFHHKAQPQ
>NC_013592.1|WP_012885874.1|3681373_3683101_+|DNA-repair-protein
MTPDQTPRRHTACDSDNMQCFTLTCLSPVHVATGDSLNPGEYLIDQNALYELGQGGLSPALTATQRSELLTILESNDPALPLTVQRFLAREAGKLKYAARRVRPLLPGISHYYQSRLGQVMQNDTKNKKQVLNQLELMRHVGAALGAPYIPGSTLKGAIRTALVSALNQGQPLQAERLETDKLNNKVAQDTEHLLLKIPKRNVKDWIKHDPFHWLQVGDAVSPAAHPPMLDYWLVRRQPLKGTEKQNNKADNMELSPVECLKPRQSPLRCQITVKTPPAAIPIKNPRLKQWLGKVSQLAQQVNQITLPQCHHELDWLAEKHIGTDDAYAPGQNWVAQMQQLLRQLDGPLQRGEALLLRVGKYGGAISKTVEGWRHIARLGKKGTRPTYHPDVTTCTLALPQADALTQALPFGWVLLHRPDQPEVAEFVASHQDWCQRQQQWLADHQQQQHAHRQQRQAEQQQRQQLAKEREEEAQRLAKAREEEAQRLADKARQSQARQSIMSLAESLASEQQFQRKNPNGPLRGQLATCVGCVAAEGSADEKADLCTLFDAILSYWGIKPGKDKKLTALRNKLL
>NC_013592.1|WP_012885875.1|3683097_3684030_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MTWACHLARYRLCFQSREPLALPLFSGSMLRGAFGHALRRICCISRQKQCDGCPLLAGCQYPLLFEPRLLQHTPGQPQPAPPYVLEPAAVQGALAAGEIWPVDVVLHGPALPHLSLIILAWMQAAVQGFGSQRVPAQLCQVQVEQPDTTPHEARWLTIWRHDQPFILPHATTHTPPPPPETDALRLHFTTPTRLLRQGQLVRVRELQAHDLLAALERRLHTLADSLGIAPPPPMTTQPVTLQPGQLRWMNWQRYSSRQQQEMNLGGFIGDVTLHGELTPLWPWLWLGQWLHVGKNSSFGLGRYRLEAVPR

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Crispr_ID: NC_013592_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013592_5

3676345-3676659

TypeIII

Consensus_repeat	Method
AGTCCGTACGGACCTTCCCTGACTGAAGGGATTAAGAC	CRISPRCasFinder
GGACCTNCCCTGACTGAAGGGATTAANACTC	CRT
CCCTGACTGAAGGGATTAAGACTC	PILER-CR

4 spacers

cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,PD-DExK,cas1,cas2

The CRISPR arrays of NC_013592_5

>merge|NC_013592|5|3676345-3676659|CRISPRCasFinder,CRT,PILER-CR
AGTCCGTACGGACCTTCCCTGACTGAAGGGATTAAGACTCAGCTACCCGACGAAGATGATAATCCAAAAAGTCCGTACGGACCTTCCCTAACTGAAGGGATTAAGACGTTTGAACTTGTTTTGCATGATCAGCACGATCGGTCCGTAAGGACCTTCCCTGACTAAAGGGATTAAGACTCAGTGAAACTCAAGACAAACCGTTTCATACCAGTCCTTATGGACTCGCCCTGACTGAAGGGATTAAAACTCCTCCTCTTCTTCCTCTTCTTCCTCTTCTGTCCTCACGGACTCCCCTGACTGAAGGGATTTTCTCTC

>NC_013592|5|5|3676345-3676591|CRISPRCasFinder
AGTCCGTACGGACCTTCCCTGACTGAAGGGATTAAGAC	TCAGCTACCCGACGAAGATGATAATCCAAAA
AGTCCGTACGGACCTTCCCTAACTGAAGGGATTAAGAC	GTTTGAACTTGTTTTGCATGATCAGCACGATC
GGTCCGTAAGGACCTTCCCTGACTAAAGGGATTAAGAC	TCAGTGAAACTCAAGACAAACCGTTTCATACC
AGTCCTTATGGACTCGCCCTGACTGAAGGGATTAAAAC

>NC_013592|5|4|3676354-3676659|CRT
GGACCTTCCCTGACTGAAGGGATTAAGACTC	AGCTACCCGACGAAGATGATAATCCAAAAAGTCCGTAC
GGACCTTCCCTAACTGAAGGGATTAAGACGT	TTGAACTTGTTTTGCATGATCAGCACGATCGGTCCGTAA
GGACCTTCCCTGACTAAAGGGATTAAGACTC	AGTGAAACTCAAGACAAACCGTTTCATACCAGTCCTTAT
GGACTCGCCCTGACTGAAGGGATTAAAACTC	CTCCTCTTCTTCCTCTTCTTCCTCTTCTGTCCTCA
CGGACTCCCCTGACTGAAGGGATTTTCTCTC

>NC_013592|5|4|3676430-3676593|PILER-CR
CCCTAACTGAAGGGATTAAGACGT	TTGAACTTGTTTTGCATGATCAGCACGATCGGTCCGTAAGGACCTT
CCCTGACTAAAGGGATTAAGACTC	AGTGAAACTCAAGACAAACCGTTTCATACCAGTCCTTATGGACTCG
CCCTGACTGAAGGGATTAAAACTC

Protein	Signature genes	Signature genes Name	Protein_function
NC_013592.1\|WP_012885873.1\|3680396_3681377_+\|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	unknown
NC_013592.1\|WP_012885867.1\|3674750_3675035_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NC_013592.1\|WP_041164570.1\|3675657_3675852_-\|host-cell-division-inhibitor-Icd-like-protein	unknown	unknown	unknown
NC_013592.1\|WP_012885876.1\|3684456_3685380_-\|hypothetical-protein	PD-DExK	mkCas0090_PD-DExK_CAS-I:CAS-III	unknown
NC_013592.1\|WP_012885877.1\|3687026_3687323_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NC_013592.1\|WP_012885864.1\|3670793_3671558_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180993
NC_013592.1\|WP_041164569.1\|3672485_3673694_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NC_013592.1\|WP_041164575.1\|3686737_3687034_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376633
NC_013592.1\|WP_012885869.1\|3675449_3675665_-\|hypothetical-protein	unknown	unknown	unknown
NC_013592.1\|WP_012885860.1\|3666250_3667687_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341267
NC_013592.1\|WP_012885863.1\|3668931_3670071_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368189
NC_013592.1\|WP_012885868.1\|3675024_3675276_-\|prevent-host-death-protein	unknown	unknown	gnl\|CDD\|170091
NC_013592.1\|WP_012885874.1\|3681373_3683101_+\|DNA-repair-protein	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NC_013592.1\|WP_012885870.1\|3676791_3679224_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NC_013592.1\|WP_049779825.1\|3671589_3672471_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|185333
NC_013592.1\|WP_012885861.1\|3667683_3668802_-\|cytochrome-c552	unknown	unknown	gnl\|CDD\|274974
NC_013592.1\|WP_012885872.1\|3679659_3680397_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NC_013592.1\|WP_012885871.1\|3679248_3679647_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NC_013592.1\|WP_012885875.1\|3683097_3684030_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0091_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NC_013592.1\|WP_041164573.1\|3686161_3686581_+\|hypothetical-protein	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633

Protein	Function_ID	Function_description	E-value
NC_013592.1\|WP_012885875.1\|3683097_3684030_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	2.53273e-09
NC_013592.1\|WP_012885867.1\|3674750_3675035_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	7.45225e-19
NC_013592.1\|WP_041164573.1\|3686161_3686581_+\|hypothetical-protein	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.03515e-13
NC_013592.1\|WP_012885864.1\|3670793_3671558_+\|SDR-family-oxidoreductase	gnl\|CDD\|180993	PRK07478, PRK07478, short chain dehydrogenase; Provisional.	1.87401e-152
NC_013592.1\|WP_041164569.1\|3672485_3673694_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.40403e-18
NC_013592.1\|WP_041164575.1\|3686737_3687034_+\|hypothetical-protein	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	9.07444e-05
NC_013592.1\|WP_012885860.1\|3666250_3667687_-\|AMP-binding-protein	gnl\|CDD\|341267	cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) and similar proteins. This family includes D-alanyl carrier protein ligase DltA and aliphatic beta-amino acid adenylation enzymes IdnL1 and CmiS6. DltA incorporates D-ala in techoic acids in gram-positive bacteria via a two-step process, starting with adenylation of D-alanine that transfers D-alanine to the D-alanyl carrier protein. IdnL1, a short-chain aliphatic beta-amino acid adenylation enzyme, recognizes 3-aminobutanoic acid, and is involved in the synthesis of the macrolactam antibiotic incednine. CmiS6 is a medium-chain beta-amino acid adenylation enzyme that recognizes 3-aminononanoic acid, and is involved in the synthesis of cremimycin, also a macrolactam antibiotic. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	4.46527e-149
NC_013592.1\|WP_012885861.1\|3667683_3668802_-\|cytochrome-c552	gnl\|CDD\|274974	TIGR04091, hypothetical_protein, D-alanyl-lipoteichoic acid biosynthesis protein DltB. Members of this protein family are DltB, part of a four-gene operon for D-alanyl-lipoteichoic acid biosynthesis that is present in the vast majority of low-GC Gram-positive organisms. This protein may be involved in transport of D-alanine across the plasma membrane. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	4.89363e-52
NC_013592.1\|WP_012885872.1\|3679659_3680397_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	7.01576e-73
NC_013592.1\|WP_012885874.1\|3681373_3683101_+\|DNA-repair-protein	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	5.47877e-08
NC_013592.1\|WP_012885870.1\|3676791_3679224_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	1.09351e-89
NC_013592.1\|WP_049779825.1\|3671589_3672471_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|185333	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada.	1.45443e-51
NC_013592.1\|WP_012885863.1\|3668931_3670071_-\|hypothetical-protein	gnl\|CDD\|368189	pfam04914, DltD, DltD protein. DltD is and integral membrane protein involved in the biosynthesis of D-alanyl-lipoteichoic acid. This is important in controlling the net ionic charge in lipoteichoic acid (LTA). This family is found in bacteria of the Bacillus/Clostridium group. DltD binds Dcp and ligates it with D-alanine. DltD does not ligate acyl carrier protein (ACP) with D-alanine. It also has thioesterase activity for mischarged D-alanyl-acyl carrier protein (ACP). DltD is thought to be responsible for discriminating between Dcp involved in the D-alanylation of LTA, and ACP involved in fatty acid biosynthesis.	6.01296e-12
NC_013592.1\|WP_012885868.1\|3675024_3675276_-\|prevent-host-death-protein	gnl\|CDD\|170091	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN.	2.0709e-07
NC_013592.1\|WP_012885871.1\|3679248_3679647_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	5.03074e-13
NC_013592.1\|WP_012885877.1\|3687026_3687323_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	2.95138e-11

>NC_013592.1|WP_041164570.1|3675657_3675852_-|host-cell-division-inhibitor-Icd-like-protein
MATAPTLLHPQFTFLFLAVHRAGLSHPCRKAMVAADEHSARRRLGPDFILVFAGRLPVREVRHV
>NC_013592.1|WP_012885869.1|3675449_3675665_-|hypothetical-protein
MFDSTPLTPEEITDQCRALTYAVIELENPAAKEALLFVLAERLEVLLATLEMPDDSDSDTPESPAQSGTMH
>NC_013592.1|WP_012885868.1|3675024_3675276_-|prevent-host-death-protein
MPVQPILANAAVSISEFKKSPNAALKAAHGEPVAVLTNGHISGYYVSPEIWETLADYLEDKELASIARSRMKGKRVKVTLDEL
>NC_013592.1|WP_012885867.1|3674750_3675035_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSYKLEFEEHALKEFKKLGAPVREQFIKKLKEVLQNPHIPANRLHGMADCYKIKLRSAGYRLVYHVLEHEIVVLVVAVGKRERSQVYTSAKSRL
>NC_013592.1|WP_041164569.1|3672485_3673694_-|MFS-transporter
MPLRSLQALCLVNFFMADVRDGLGPFLGIFLTEHHWKADDIGWIMTVGGLAGLVATMPCGLAADASRNKRAVLVACCVLITAATLLLWFFPNRYVVGFSQVITGVSATFIAPLLTGITLGLTGPSGFNHQMGRNEAFNHGGNMSAAMLAGALVIYWGTDVVFILMTGMAICATMAVLAIRHGDIDNRVARGLSGADDAASAPRLSVIITHPAVVTTGATLMLFHLANAALLPMLSMRVAAMPDGEMSAGVYAAATVIISQLVMIPVALFAAAKADKYGYAVLITLALIVLPLRAALASVSAGPFFMIPVQVLDGVAAGLLGVAVPGYIVRLLEGSGHTNAGLSVVMLLQGIGASFSPALAGNIAATYSYRTAFAVLGGIALLALLLWWLRRLLAWDRQRQYD
>NC_013592.1|WP_049779825.1|3671589_3672471_+|methylated-DNA--[protein]-cysteine-S-methyltransferase
MPDYTHSDAAHSNDEHSDYARIADAITFIANSVNSQPTLDEIAAHVHLSPFHFQRLFSRWAGVTPKRFLQVLTLERAKALLRESRPLLDVADAVGLSSSSRLYDHFVHLEAVTPGEYKQQGAGLIIEHAVHPTPFGNAFIAVTPRGICSLSFLDNKDAGEPLAALHHTWPHAVMHENPQRTQTVIDTLFAMKTPPDRPISLHVTGTNFQISVWKALLQIPPATVVSYSQVADAIGHHNAARAVGLAVGANPVAFLIPCHRVIQQSGKIGGYHWGETRKHAIHAWESARYERYE
>NC_013592.1|WP_012885864.1|3670793_3671558_+|SDR-family-oxidoreductase
MPDLSDKIAIITGASSGIGYATAKRFAQEGARVIVGARRQQALNTLVEEITLAGGHAVALAGDVKSEAFAKALVELAMDCYGGLDIAVNNAGTTGETGSLLDMSLAEWENTLHTNLTSAFVGAKHQIPAMLRRGGGSVIFTSTFVGYTLGLPGMAAYAASKSGLIGLTRVLAAEFGAQGIRVNALLPGGTDTPMGQAFTRDPESLAFVQGLHALKRLAQPEEIAASALYLASDAASFTTGIALLADGGASICRT
>NC_013592.1|WP_012885863.1|3668931_3670071_-|hypothetical-protein
MKKLKNTICLHLLMATLAILVLSVPPLVTSFDPPLNFQPLIKSLDGTPKELKEKMATISHALQGNAIFFIGASEVSTSEDEHYAVYNYFNNQLRRPVVAYGDIYIDNIAHFLLLSRFKNDLNANSKVVLQLAPDSFYGDGVPGAVFADNFPPSIFNPLMDDPEPRRFLVSYLQNLNIDEVSHLTFAQMRVYGWHPQIIWQEVSYQFAIFCEMIKKDWLARLGIEPQPVRPWPVKPSPDIVPNWDNELANAHELNKSRQQSAATFWMDKSVYDDDPTQDVWDDAPLFPAQMDAFQATIKLLKERHVQVVVIVDAINPWAIKNSEKFQSIDKQIRSMLDENQVPYLDMYAMPYQNGWNWDRLHPTDPAWVVMDRFIAESFK
>NC_013592.1|WP_012885861.1|3667683_3668802_-|cytochrome-c552
MYSSGTFFFCLFGLALLFVLINRLWHYRLTYLSAISALVLLGWGYIFQGDYIVPVAVFLSFYIIVTLKEKGWLKTWQAVTLTLLPLFLVKLHLNNHWGMIGLSFMTFRAVDVLLYRTKKDGQNFLHYFCYLFMPLVISAGPMYRWRAWVTDSNKPSFVITREQFLPAMEQIFIGIIQKFLFATLIDNLVIQSWSHRPFTLSVGVVMSVAYSAYLYFDFAGYSNMAIGAGRLFGLNIPANFNMPILAKNPQDFWRRFHISLSEWLRDVVFMPIYMNLMKIDFFRQNKTLAQNIGIFCTLFCMGAWNGLERHYIISGALFGAISVAHNMLQWSAKRSPTLSNWLQRPVIAFLGRILTLASAAVSLYIFSGMSPL
>NC_013592.1|WP_012885860.1|3666250_3667687_-|AMP-binding-protein
MNYHSELKELQDFLHAVLLKPANPHQLAISGSDEAMTWQQLSVAVSDWQQRYQHCQQPAGTPVVLYGHQQAEFAVAIYSCLLHNIPYVPVDCIYPQERLREICQQAKAPYYYDVATKQFITTGEEGQVLAEPELAYIMFTSGSTGKPKGVQIGRESLWHFMQWVRQDFSLPDVPVLMNHAVFSFDLSLIPLLANLATGGHIVLNAKEDIAAENWLERLKNNGVSVWVSTPSFAYQRLLSPQFNSDYLPALSVFVFIGEVLNKALVKQLRRRFPHAKILNSYGPTEATIATTVIEITDEILCSENDVLPVGAMMPDSHMEITAEGELIIWGKNVMRGYLGLPQENAAKLLHRESEQFRGYRTGDLGYEENGILYCQGRNDSQIKLNGYRIEINEIENRLLAMPDISEAVVLPLMKSGGGVLRIAAFCVTKLAPDAIKTSLSKVIPPYMVPSQIIIKDALPLNPNGKIDRKLLDTHARTN
>NC_013592.1|WP_012885870.1|3676791_3679224_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MNWLAASCHVAAFALLHNLKPLAQRAGIQDFPSPALANKLFAPLPESLSNRVDLHENTLTPLLDFAARLARGVPETPVSRGETGLIPLTHLLADDNHSAPAARCYSPLAPLGVDSLMPVTAALPASERQAAYRQVYQALIEGLEAIPAAHRLQPSLWLDHLDSLWMTTCHALPDGDGDSGISLYDQGKTTAALAVALWQHHARQATPEQEIPLTPGDDARLLLIQADVFGIQNLIFAEGNQTQKMAAKLLRGRSLQVSLLAEAAALRVLEAFDLPPVCQLINAAGKSLIVAPNLPDAAERLAGLRQRLDEWFLTHTYAQTGIGLCSTVAGSAEFLGEQAYGTLQSRLAQAMEQQKYQRFSLCAGDAPPPVFDGYLDHIAQGTGGEPCPVNGLHPVETTLNGLDCSRLAADQITLGHWISHSECYARLLILRDSTATFPDNRCLHLTLFGYQVVAVRLKENSGEFGELAHNGSLRRCWDISLPPEGVPLFQGYARRFINGWMPLAQGEYQPECYPGVADALANGDIKTFDHLSCEDLYQDADQQLRGTCALGVLKGDIDNLGYLFRSGLPQPGFAKTIGLSRQIHLFFTLWLPHLCRQDSRFANTYTVFAGGDDFFLIGPWRSQQTLALTMAQHFARYSGHNPALHFSLGLVQAKPSYPVRALAAQAEAALEQVKQHPGKNAICLYNEVMGWPEYDALLTCSEELARWREHDGYPLSSGLLYRLLALSELSAKESATPQAALWRSRLAYFLRRNLVDKVKVPAQENPAAFRHQLYLTLFAILEQHLKRHRQRYRVALQRHLYHYRTVPRGE
>NC_013592.1|WP_012885871.1|3679248_3679647_+|type-III-A-CRISPR-associated-protein-Csm2
MTMPDFKRQLHKPEATFFDKDAEDFAKSLLILNDRGKPLSLNKPTQLRRFYDQLQQLEQRINGDEEKLALYLPEIRMISAHLAYAKGRELISDEFCKTMQHLIRSIDTCQHLKNGRLFFEATLGFLRAIRHD
>NC_013592.1|WP_012885872.1|3679659_3680397_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MQLNNIQTLRATLVCETGLHIGGGDTALQIGGIDSAVVRHPLTQQPYIPGSSLKGKLRSLLEWRAGVVGDTKGKVLSHQVYQDLKDAQKQAQALKILQLFGVSGGDKLSAEQAQQVGPTRLSFWDCKFDEHWLAQQGGRVQTEEKAENCIDRISGVALHPRFIERVPAGSRFDFRLTVRQLDGDSPDLLDTLLAGLKMLELDGLGGSISRGYGKVRFETLTLDGEDLQPRFEQLQPFKHTTQGAG
>NC_013592.1|WP_012885873.1|3680396_3681377_+|hypothetical-protein
MPSPVAPAAAWQWLRLRLFPDSAFATALRGDTLFGQLCWYLRESLGEAGLNDLLAGYHDQRPFAVISDPMLADHLPRPHLPEHLLGFAAADARARKQRKQQCWLPLAFAHQPLAEWGAHVTAAPERHRHRSDVQMHNSINRQTLTTGGDDAFAPFGSEQHWFDVDTAWDLYLLHDERLSAAQLTDALCAIGLLGYGKDASIGKGRFHLTPQPMPELPTPDGNPLRLTLAPCAPQQGHWHSADSFFSPLVRVGRHGAALVVQGHPFKNPLLLADSAAVLAPVTPDNRPFVGQGLGGNGRLSTALPQTVHQGYAPVIPVRFHHKAQPQ
>NC_013592.1|WP_012885874.1|3681373_3683101_+|DNA-repair-protein
MTPDQTPRRHTACDSDNMQCFTLTCLSPVHVATGDSLNPGEYLIDQNALYELGQGGLSPALTATQRSELLTILESNDPALPLTVQRFLAREAGKLKYAARRVRPLLPGISHYYQSRLGQVMQNDTKNKKQVLNQLELMRHVGAALGAPYIPGSTLKGAIRTALVSALNQGQPLQAERLETDKLNNKVAQDTEHLLLKIPKRNVKDWIKHDPFHWLQVGDAVSPAAHPPMLDYWLVRRQPLKGTEKQNNKADNMELSPVECLKPRQSPLRCQITVKTPPAAIPIKNPRLKQWLGKVSQLAQQVNQITLPQCHHELDWLAEKHIGTDDAYAPGQNWVAQMQQLLRQLDGPLQRGEALLLRVGKYGGAISKTVEGWRHIARLGKKGTRPTYHPDVTTCTLALPQADALTQALPFGWVLLHRPDQPEVAEFVASHQDWCQRQQQWLADHQQQQHAHRQQRQAEQQQRQQLAKEREEEAQRLAKAREEEAQRLADKARQSQARQSIMSLAESLASEQQFQRKNPNGPLRGQLATCVGCVAAEGSADEKADLCTLFDAILSYWGIKPGKDKKLTALRNKLL
>NC_013592.1|WP_012885875.1|3683097_3684030_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MTWACHLARYRLCFQSREPLALPLFSGSMLRGAFGHALRRICCISRQKQCDGCPLLAGCQYPLLFEPRLLQHTPGQPQPAPPYVLEPAAVQGALAAGEIWPVDVVLHGPALPHLSLIILAWMQAAVQGFGSQRVPAQLCQVQVEQPDTTPHEARWLTIWRHDQPFILPHATTHTPPPPPETDALRLHFTTPTRLLRQGQLVRVRELQAHDLLAALERRLHTLADSLGIAPPPPMTTQPVTLQPGQLRWMNWQRYSSRQQQEMNLGGFIGDVTLHGELTPLWPWLWLGQWLHVGKNSSFGLGRYRLEAVPR
>NC_013592.1|WP_012885876.1|3684456_3685380_-|hypothetical-protein
MTNQAKELSKKDGKKYLKNAFKLQQEVLKTQLLQSRAAITHEGVKGDVNEGYFLDIIRQYLPERYSVDRGIVVNSAGRTSDQIDVIIFDRHYTPTLLNQQGHRLIPAEAVYAVMEVKPIIDASNLDYAADKAASVRSLDRTNMTFRHSGGVGRGRLFNIITGIIAIDVDWRDGFNSDAFKKKLQSINQSEDNGHKNLDCGLALSGGCFDFFSKEDEKIKKEEERKKKEEEEKRNRDPQSQSEINVKEIFKTIENTQMENLTIRNKEEGALAYFLFRLLRELQWLGTAPAIDWNEYVNMLDHDNEPST
>NC_013592.1|WP_041164573.1|3686161_3686581_+|hypothetical-protein
MTTLVLDRPDYHLMLQQGLLHLSHPEREVRLLPLGDLERIVMGAGITLNSDLLLKLAEHDIELIAVGRHSCAHLFNPQTPPNALRLLQYRLTLQEACRMQFVKRLISARREGQNQVLRRLHAAPLPPLPHDTPHSMKPT
>NC_013592.1|WP_041164575.1|3686737_3687034_+|hypothetical-protein
MISIWACTTSTGYRRHSLLLDIKELTRATLENHVLDLWQQHTLTAEHFHHDGPACRLTAQGQQIFYTDWFSWLAQRRRGLRRLARLCRRLLEREARYA
>NC_013592.1|WP_012885877.1|3687026_3687323_+|CRISPR-associated-endonuclease-Cas2
MPKPLWLIGYDIACPKRLRKMQRRCASQGWALQKSLFLFALTVPERQALCRELQRLIDPQEDRLLCLPFDTPPGSFHLGPRSDYLLIHTDPRLNDFVF

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Crispr_ID: NC_013592_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013592_6

3687590-3687751

TypeIII

Consensus_repeat	Method
GCCCTGACTGAAGGGATTAAGAC	CRISPRCasFinder

2 spacers

cas2,cas1,PD-DExK,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10

The CRISPR arrays of NC_013592_6

>merge|NC_013592|6|3687590-3687751|CRISPRCasFinder
GCCCTGACTGAAGGGATTAAGACCCAAATTCTTTAACATGTATTTCAACGTCTATCGTCCGTACGGACCTTCCCTGACTGAAGGGATTAAGACTTCAAATCGCGTCCAGTAGGACTTTTTGATGGGTCCTTATGGACTCGCCCTGACTGAAGGGATTTTCTG

>NC_013592|6|6|3687590-3687751|CRISPRCasFinder
GCCCTGACTGAAGGGATTAAGAC	CCAAATTCTTTAACATGTATTTCAACGTCTATCGTCCGTACGGACCT
TCCCTGACTGAAGGGATTAAGAC	TTCAAATCGCGTCCAGTAGGACTTTTTGATGGGTCCTTATGGACTC
GCCCTGACTGAAGGGATTTTCTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013592.1\|WP_012885873.1\|3680396_3681377_+\|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	unknown
NC_013592.1\|WP_012885870.1\|3676791_3679224_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NC_013592.1\|WP_012885876.1\|3684456_3685380_-\|hypothetical-protein	PD-DExK	mkCas0090_PD-DExK_CAS-I:CAS-III	unknown
NC_013592.1\|WP_012885881.1\|3691012_3691372_-\|sigma-factor-binding-protein-Crl	unknown	unknown	gnl\|CDD\|182882
NC_013592.1\|WP_012885887.1\|3697165_3697891_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NC_013592.1\|WP_041164575.1\|3686737_3687034_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376633
NC_013592.1\|WP_041164573.1\|3686161_3686581_+\|hypothetical-protein	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NC_013592.1\|WP_012885878.1\|3687871_3688120_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|376540
NC_013592.1\|WP_012885872.1\|3679659_3680397_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NC_013592.1\|WP_012885874.1\|3681373_3683101_+\|DNA-repair-protein	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NC_013592.1\|WP_012885875.1\|3683097_3684030_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0091_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NC_013592.1\|WP_012885886.1\|3695784_3696843_-\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NC_013592.1\|WP_012885884.1\|3693790_3693985_+\|hypothetical-protein	unknown	unknown	unknown
NC_013592.1\|WP_012885871.1\|3679248_3679647_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NC_013592.1\|WP_012885882.1\|3691636_3692887_-\|esterase-FrsA	unknown	unknown	gnl\|CDD\|235337
NC_013592.1\|WP_012885883.1\|3693100_3693559_-\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
NC_013592.1\|WP_012885877.1\|3687026_3687323_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NC_013592.1\|WP_012885880.1\|3689781_3690885_-\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NC_013592.1\|WP_012885879.1\|3688517_3689771_-\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NC_013592.1\|WP_012885885.1\|3694251_3695712_+\|beta-Ala-His-dipeptidase	unknown	unknown	gnl\|CDD\|184986

Protein	Function_ID	Function_description	E-value
NC_013592.1\|WP_012885879.1\|3688517_3689771_-\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NC_013592.1\|WP_012885870.1\|3676791_3679224_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	1.09351e-89
NC_013592.1\|WP_012885881.1\|3691012_3691372_-\|sigma-factor-binding-protein-Crl	gnl\|CDD\|182882	PRK10984, PRK10984, sigma factor-binding protein Crl.	2.56588e-61
NC_013592.1\|WP_012885887.1\|3697165_3697891_+\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	2.41693e-83
NC_013592.1\|WP_041164575.1\|3686737_3687034_+\|hypothetical-protein	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	9.07444e-05
NC_013592.1\|WP_041164573.1\|3686161_3686581_+\|hypothetical-protein	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.03515e-13
NC_013592.1\|WP_012885878.1\|3687871_3688120_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	5.37544e-08
NC_013592.1\|WP_012885872.1\|3679659_3680397_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	7.01576e-73
NC_013592.1\|WP_012885874.1\|3681373_3683101_+\|DNA-repair-protein	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	5.47877e-08
NC_013592.1\|WP_012885875.1\|3683097_3684030_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	2.53273e-09
NC_013592.1\|WP_012885886.1\|3695784_3696843_-\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NC_013592.1\|WP_012885871.1\|3679248_3679647_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	5.03074e-13
NC_013592.1\|WP_012885882.1\|3691636_3692887_-\|esterase-FrsA	gnl\|CDD\|235337	PRK05077, frsA, esterase FrsA.	0
NC_013592.1\|WP_012885883.1\|3693100_3693559_-\|xanthine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	7.29617e-112
NC_013592.1\|WP_012885877.1\|3687026_3687323_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	2.95138e-11
NC_013592.1\|WP_012885880.1\|3689781_3690885_-\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
NC_013592.1\|WP_012885885.1\|3694251_3695712_+\|beta-Ala-His-dipeptidase	gnl\|CDD\|184986	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional.	0

>NC_013592.1|WP_012885877.1|3687026_3687323_+|CRISPR-associated-endonuclease-Cas2
MPKPLWLIGYDIACPKRLRKMQRRCASQGWALQKSLFLFALTVPERQALCRELQRLIDPQEDRLLCLPFDTPPGSFHLGPRSDYLLIHTDPRLNDFVF
>NC_013592.1|WP_041164575.1|3686737_3687034_+|hypothetical-protein
MISIWACTTSTGYRRHSLLLDIKELTRATLENHVLDLWQQHTLTAEHFHHDGPACRLTAQGQQIFYTDWFSWLAQRRRGLRRLARLCRRLLEREARYA
>NC_013592.1|WP_041164573.1|3686161_3686581_+|hypothetical-protein
MTTLVLDRPDYHLMLQQGLLHLSHPEREVRLLPLGDLERIVMGAGITLNSDLLLKLAEHDIELIAVGRHSCAHLFNPQTPPNALRLLQYRLTLQEACRMQFVKRLISARREGQNQVLRRLHAAPLPPLPHDTPHSMKPT
>NC_013592.1|WP_012885876.1|3684456_3685380_-|hypothetical-protein
MTNQAKELSKKDGKKYLKNAFKLQQEVLKTQLLQSRAAITHEGVKGDVNEGYFLDIIRQYLPERYSVDRGIVVNSAGRTSDQIDVIIFDRHYTPTLLNQQGHRLIPAEAVYAVMEVKPIIDASNLDYAADKAASVRSLDRTNMTFRHSGGVGRGRLFNIITGIIAIDVDWRDGFNSDAFKKKLQSINQSEDNGHKNLDCGLALSGGCFDFFSKEDEKIKKEEERKKKEEEEKRNRDPQSQSEINVKEIFKTIENTQMENLTIRNKEEGALAYFLFRLLRELQWLGTAPAIDWNEYVNMLDHDNEPST
>NC_013592.1|WP_012885875.1|3683097_3684030_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MTWACHLARYRLCFQSREPLALPLFSGSMLRGAFGHALRRICCISRQKQCDGCPLLAGCQYPLLFEPRLLQHTPGQPQPAPPYVLEPAAVQGALAAGEIWPVDVVLHGPALPHLSLIILAWMQAAVQGFGSQRVPAQLCQVQVEQPDTTPHEARWLTIWRHDQPFILPHATTHTPPPPPETDALRLHFTTPTRLLRQGQLVRVRELQAHDLLAALERRLHTLADSLGIAPPPPMTTQPVTLQPGQLRWMNWQRYSSRQQQEMNLGGFIGDVTLHGELTPLWPWLWLGQWLHVGKNSSFGLGRYRLEAVPR
>NC_013592.1|WP_012885874.1|3681373_3683101_+|DNA-repair-protein
MTPDQTPRRHTACDSDNMQCFTLTCLSPVHVATGDSLNPGEYLIDQNALYELGQGGLSPALTATQRSELLTILESNDPALPLTVQRFLAREAGKLKYAARRVRPLLPGISHYYQSRLGQVMQNDTKNKKQVLNQLELMRHVGAALGAPYIPGSTLKGAIRTALVSALNQGQPLQAERLETDKLNNKVAQDTEHLLLKIPKRNVKDWIKHDPFHWLQVGDAVSPAAHPPMLDYWLVRRQPLKGTEKQNNKADNMELSPVECLKPRQSPLRCQITVKTPPAAIPIKNPRLKQWLGKVSQLAQQVNQITLPQCHHELDWLAEKHIGTDDAYAPGQNWVAQMQQLLRQLDGPLQRGEALLLRVGKYGGAISKTVEGWRHIARLGKKGTRPTYHPDVTTCTLALPQADALTQALPFGWVLLHRPDQPEVAEFVASHQDWCQRQQQWLADHQQQQHAHRQQRQAEQQQRQQLAKEREEEAQRLAKAREEEAQRLADKARQSQARQSIMSLAESLASEQQFQRKNPNGPLRGQLATCVGCVAAEGSADEKADLCTLFDAILSYWGIKPGKDKKLTALRNKLL
>NC_013592.1|WP_012885873.1|3680396_3681377_+|hypothetical-protein
MPSPVAPAAAWQWLRLRLFPDSAFATALRGDTLFGQLCWYLRESLGEAGLNDLLAGYHDQRPFAVISDPMLADHLPRPHLPEHLLGFAAADARARKQRKQQCWLPLAFAHQPLAEWGAHVTAAPERHRHRSDVQMHNSINRQTLTTGGDDAFAPFGSEQHWFDVDTAWDLYLLHDERLSAAQLTDALCAIGLLGYGKDASIGKGRFHLTPQPMPELPTPDGNPLRLTLAPCAPQQGHWHSADSFFSPLVRVGRHGAALVVQGHPFKNPLLLADSAAVLAPVTPDNRPFVGQGLGGNGRLSTALPQTVHQGYAPVIPVRFHHKAQPQ
>NC_013592.1|WP_012885872.1|3679659_3680397_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MQLNNIQTLRATLVCETGLHIGGGDTALQIGGIDSAVVRHPLTQQPYIPGSSLKGKLRSLLEWRAGVVGDTKGKVLSHQVYQDLKDAQKQAQALKILQLFGVSGGDKLSAEQAQQVGPTRLSFWDCKFDEHWLAQQGGRVQTEEKAENCIDRISGVALHPRFIERVPAGSRFDFRLTVRQLDGDSPDLLDTLLAGLKMLELDGLGGSISRGYGKVRFETLTLDGEDLQPRFEQLQPFKHTTQGAG
>NC_013592.1|WP_012885871.1|3679248_3679647_+|type-III-A-CRISPR-associated-protein-Csm2
MTMPDFKRQLHKPEATFFDKDAEDFAKSLLILNDRGKPLSLNKPTQLRRFYDQLQQLEQRINGDEEKLALYLPEIRMISAHLAYAKGRELISDEFCKTMQHLIRSIDTCQHLKNGRLFFEATLGFLRAIRHD
>NC_013592.1|WP_012885870.1|3676791_3679224_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MNWLAASCHVAAFALLHNLKPLAQRAGIQDFPSPALANKLFAPLPESLSNRVDLHENTLTPLLDFAARLARGVPETPVSRGETGLIPLTHLLADDNHSAPAARCYSPLAPLGVDSLMPVTAALPASERQAAYRQVYQALIEGLEAIPAAHRLQPSLWLDHLDSLWMTTCHALPDGDGDSGISLYDQGKTTAALAVALWQHHARQATPEQEIPLTPGDDARLLLIQADVFGIQNLIFAEGNQTQKMAAKLLRGRSLQVSLLAEAAALRVLEAFDLPPVCQLINAAGKSLIVAPNLPDAAERLAGLRQRLDEWFLTHTYAQTGIGLCSTVAGSAEFLGEQAYGTLQSRLAQAMEQQKYQRFSLCAGDAPPPVFDGYLDHIAQGTGGEPCPVNGLHPVETTLNGLDCSRLAADQITLGHWISHSECYARLLILRDSTATFPDNRCLHLTLFGYQVVAVRLKENSGEFGELAHNGSLRRCWDISLPPEGVPLFQGYARRFINGWMPLAQGEYQPECYPGVADALANGDIKTFDHLSCEDLYQDADQQLRGTCALGVLKGDIDNLGYLFRSGLPQPGFAKTIGLSRQIHLFFTLWLPHLCRQDSRFANTYTVFAGGDDFFLIGPWRSQQTLALTMAQHFARYSGHNPALHFSLGLVQAKPSYPVRALAAQAEAALEQVKQHPGKNAICLYNEVMGWPEYDALLTCSEELARWREHDGYPLSSGLLYRLLALSELSAKESATPQAALWRSRLAYFLRRNLVDKVKVPAQENPAAFRHQLYLTLFAILEQHLKRHRQRYRVALQRHLYHYRTVPRGE
>NC_013592.1|WP_012885878.1|3687871_3688120_+|helix-turn-helix-domain-containing-protein
MASTYTAEYQLVIKTLREARIAKGITQEMLAQALERPQSFIAKVENGERRLDVVEFVQLARLLALDPAQVLNSIPFRLKPLS
>NC_013592.1|WP_012885879.1|3688517_3689771_-|glutamate-5-semialdehyde-dehydrogenase
MLEQMGKAAKKASYQLAALSTSQKNKALMTIADLLEAQHDAILSANEQDLAQARENGMSEALLDRLQLTPARLTAIADDVRQVCRLNDPVGEIIDGRILDNGLKLERRRVPLGVVGVIYEARPNVTVDVASLCLKTGNAVILRGGKETYRTNAATVKVIQQALTECGLPAAAIQAIESPDRELVNQLLKLDRYVDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESMEFEPALNVIVNAKTQRPSTCNTVETLLVHQGIAATFLPALSERMKQAGVSLHACPASLPLLSGGPANVTAVEAANYDDEWLSLDLNVKLVTDIDDAIDHIREHGTQHSDAILTRSLSRAEQFVREVDSSAVYVNATTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGYGDDLVRA
>NC_013592.1|WP_012885880.1|3689781_3690885_-|glutamate-5-kinase
MSGSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQQHAAGHRIVIVTSGAIAAGREHLGYPELPPTIATKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADLEDRERFLNARDTMRALLDNRIVPVINENDAVATAEIKVGDNDNLSALAAMLADADKLLLLTDQTGLFTADPRTNPDAELIREVQGVTDELRQIAGGSVSGLGTGGMSTKLQAADVACRSGIEVVIAAGNRAGVIGDVINDVSVGTRFHAMETPLESRKRWIFGAPPAGEITVDDGALAAMLERGSSLLPKGIREVAGNFSRGEVIRIRSLNGRDLAHAVTRYNSDALRMIAGHHSQEIAEILGYEYGPVAVHRDDMIII
>NC_013592.1|WP_012885881.1|3691012_3691372_-|sigma-factor-binding-protein-Crl
MAVKSRLIKKFASLGPYLREDQCEEKHFFFDCLAVCVNVKPAPEKREFWGWWLNLEWQDQTLFYTYRIGLFDKAGDWREETIKDTEVHEKVLATREDFHTRLQALVEQLDPPFSLSARP
>NC_013592.1|WP_012885882.1|3691636_3692887_-|esterase-FrsA
MVQANLSETLFKPSVRHQETSTLIQRSRNTPGSAEMQSALEGETTNNWYRMLNRLLWIWRGVHPWEIEEVLSRIAASQATRSDEQRLDTVIGYRGGNWIYEWVSQGMRWQQQASQHPQSEQAGQCWLNAANLYSIAAYPHLKGDELAEQAQTLANRAYEEAAIHLPYELKTLTFPVDGGGQLTAFLHLPAQGKAPFPTVLICGSLDMLQCDYHRLFQDYLAPAGFAMLTVDMPSVGFSSRWKLDQDSSFLHQQVLRALPDVPWIDHTRVGAFGFRFGANIAVRLAYLEANRLRAVACLGPIVHHLLSDAQRQRQVPDMFMDVLASRLGMTYSSDAALLVEMGRYSLKMQGLLGRRCPTPMLSGYWKDDLISPPEESMLIVNSSQQGKLLALNFSPVYQTFHLALQQMTDWLQRQLR
>NC_013592.1|WP_012885883.1|3693100_3693559_-|xanthine-phosphoribosyltransferase
MSEKYIVTWDMLQIHARKLAQRLLPAEQWKGIIAVSRGGLVPGSLLARELGIRNVDTVCISSYDHDNQRELKVLKRAEGDGEGYIVIDDLVDTGGTAKAIREMYPKAHFITIFAKPAGKPLVDDYEVDIPQDTWIEQPWDMGVVFVPPLVGR
>NC_013592.1|WP_012885884.1|3693790_3693985_+|hypothetical-protein
MTMFDSFLLAQLDVFAPFFVITILTVICFELSISLRLLRQRQPALTPIVIHRHDATSDSPRHTD
>NC_013592.1|WP_012885885.1|3694251_3695712_+|beta-Ala-His-dipeptidase
MSALSQLSPQPLWDIFAKICSIPHPSYHEEALAAYILSWAKERGLHSERDQVGNILLRKPATPGMENRKPVVIQAHLDMVPQKNNDTVHDFTTDPIQPYVDGEWIKARGTTLGADNGIGMASALAVLSDDSVEHGPLEVLLTMTEEAGMDGAFGLQPNWLQGDILINTDSEEEGEVYMGCAGGIDFLTRLPLQREAVPAGYQTLKLVIKGLKGGHSGCDIHLGLGNVNKLLARFLAHYATELDLRVIDLHGGTLRNAIPREGAVTLAVSAHHVDALKDAAQAYLAVLKHELAAVEKNITLLLETTESATTALTTASRDRFIALLNSTPNGVIRMSDDIKGVVETSLNVGVVSMTETQADIHCLIRSLVDSGKDYVVSMLTSLGELAGADTEAKGGYPGWQPDAQSPVMHLVRETYQKLFGKTPNIMVIHAGLECGLFKKPYPDMDMVSIGPTIRGPHSPDERVHIASVGQYWTLLTALLKAIPERA
>NC_013592.1|WP_012885886.1|3695784_3696843_-|DNA-polymerase-IV
MRKIIHVDMDCFYAAIEMRDNPRLRDIPLAIGGSADRRGVICTANYPARRYGVRSAMATATALRLCPHLTLLPGRMEVYKATSLQIRAIFSRYTSLIEPLSLDEAYLDVTDSPHCGGSATLMAQEIRQTIFDELHLTASAGVAPIKFLAKVASEQNKPNGQCVIAPTQMEAFLLALPLEKIPGVGNVTARRLAECGLHTCADVRRYPLSELLREFGKFGRVLWERCHGIDERQVSPDRLRKSVGVEKTLARDIHDWTACEALIERLYDELELRLRRVRPDLHIARQGVKLKFDDFRQTTQEHVWPVLNKPDLLRLARESWEQRRDARGVRLVGLHVSLMDPQLERQLLLPWD
>NC_013592.1|WP_012885887.1|3697165_3697891_+|murein-L,D-transpeptidase
MHKVAFSLAMLFILPSVAISNSYANQVSPVATETKQQVAGSPVYIQIFKEERVLELYAMIGGEYKLVQSYPICKYSGGLGPKMTEGDFKSPEGFYQVDLKQLKPDSHYYRAINVGFPNEYDRAHGYSGRYLMIHGECVSIGCYAMTNKYIEEIYTYVEKALRNGQQKVELAIYPFRMTEQNMKRHSRSNYYKFWSQLQPGYAYFNRMHQPPAVSVLNGQYVVNQSAPVGQPESHYALAKTK

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Crispr_ID: NC_013592_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013592_7

3915410-3916157

TypeI-F

I-F

Consensus_repeat	Method
GTGAACTGCCGCATAGGCAGCTTAGAAA	PILER-CR
GTGAACTGCCGCATAGGCAGCTTAGAAA	CRISPRCasFinder
GTGAACTGCCGCATAGGCAGCTTAGAAA	CRT

12 spacers

cas6f,cas7f,cas5f,cas8f,cas3f,cas1

The CRISPR arrays of NC_013592_7

>merge|NC_013592|7|3915410-3916157|PILER-CR,CRISPRCasFinder,CRT
GTGAACTGCCGCATAGGCAGCTTAGAAAGCTACCGAGATCGCCACCTGCCGTGTATCAGCGTGAACTGCCGCATAGGCAGCTTAGAAAAGCATCAGCACCGCTATAACCTCAGCCAAATAGTGAACTGCCGCATAGGCAGCTTAGAAAACGGCGTGGCCCGATTCCGGGGTGGTACTGGCGTGAACTGCCGCATAGGCAGCTTAGAAATTGATGACACAGAAAAGCTCGACCGCAAACAAGTGAACTGCCGCATAGGCAGCTTAGAAAATGGGCGGTTATCGCATGACGCCACACGCCAGGTGAACTGCCGCATAGGCAGCTTAGAAAACGGTGTACGTCACGGTCATTACCTTGGTCAGGTGAACTGCCGCATAGGCAGCTTAGAAATGAGATATCAGGCATGGGCCGGTAACCGCGATGTGAACTGCCGCATAGGCAGCTTAGAAATAGGCAGCCCATCGCTGACCGGGACTCCAACCGTGAACTGCCGCATAGGCAGCTTAGAAATTATCGAATTCCGTATTAAAATCCTGCTGCGTGTGAACTGCCGTGTAGGCAGCTTAGAAAAATCAGCGGTTGCGTCATCAAGATACGTGTCAGTGAACTGCCGTGTAGGCAGCTTAGAAACGATAACGGAGCGTCTTCCACTAATTGAGACGGTGAACTGCCGCGTAGGCAGCTTAGAAAGAGCTGGAACCAGTTGATTGACGCCATCGAAGGTGAACTGCCGTACAGGCAGCGGTGGTG

>NC_013592|7|5|3915410-3916097|PILER-CR
GTGAACTGCCGCATAGGCAGCTTAGAAA	GCTACCGAGATCGCCACCTGCCGTGTATCAGC
GTGAACTGCCGCATAGGCAGCTTAGAAA	AGCATCAGCACCGCTATAACCTCAGCCAAATA
GTGAACTGCCGCATAGGCAGCTTAGAAA	ACGGCGTGGCCCGATTCCGGGGTGGTACTGGC
GTGAACTGCCGCATAGGCAGCTTAGAAA	TTGATGACACAGAAAAGCTCGACCGCAAACAA
GTGAACTGCCGCATAGGCAGCTTAGAAA	ATGGGCGGTTATCGCATGACGCCACACGCCAG
GTGAACTGCCGCATAGGCAGCTTAGAAA	ACGGTGTACGTCACGGTCATTACCTTGGTCAG
GTGAACTGCCGCATAGGCAGCTTAGAAA	TGAGATATCAGGCATGGGCCGGTAACCGCGAT
GTGAACTGCCGCATAGGCAGCTTAGAAA	TAGGCAGCCCATCGCTGACCGGGACTCCAACC
GTGAACTGCCGCATAGGCAGCTTAGAAA	TTATCGAATTCCGTATTAAAATCCTGCTGCGT
GTGAACTGCCGTGTAGGCAGCTTAGAAA	AATCAGCGGTTGCGTCATCAAGATACGTGTCA
GTGAACTGCCGTGTAGGCAGCTTAGAAA	CGATAACGGAGCGTCTTCCACTAATTGAGACG
GTGAACTGCCGCGTAGGCAGCTTAGAAA

>NC_013592|7|7|3915410-3916157|CRISPRCasFinder
GTGAACTGCCGCATAGGCAGCTTAGAAA	GCTACCGAGATCGCCACCTGCCGTGTATCAGC
GTGAACTGCCGCATAGGCAGCTTAGAAA	AGCATCAGCACCGCTATAACCTCAGCCAAATA
GTGAACTGCCGCATAGGCAGCTTAGAAA	ACGGCGTGGCCCGATTCCGGGGTGGTACTGGC
GTGAACTGCCGCATAGGCAGCTTAGAAA	TTGATGACACAGAAAAGCTCGACCGCAAACAA
GTGAACTGCCGCATAGGCAGCTTAGAAA	ATGGGCGGTTATCGCATGACGCCACACGCCAG
GTGAACTGCCGCATAGGCAGCTTAGAAA	ACGGTGTACGTCACGGTCATTACCTTGGTCAG
GTGAACTGCCGCATAGGCAGCTTAGAAA	TGAGATATCAGGCATGGGCCGGTAACCGCGAT
GTGAACTGCCGCATAGGCAGCTTAGAAA	TAGGCAGCCCATCGCTGACCGGGACTCCAACC
GTGAACTGCCGCATAGGCAGCTTAGAAA	TTATCGAATTCCGTATTAAAATCCTGCTGCGT
GTGAACTGCCGTGTAGGCAGCTTAGAAA	AATCAGCGGTTGCGTCATCAAGATACGTGTCA
GTGAACTGCCGTGTAGGCAGCTTAGAAA	CGATAACGGAGCGTCTTCCACTAATTGAGACG
GTGAACTGCCGCGTAGGCAGCTTAGAAA	GAGCTGGAACCAGTTGATTGACGCCATCGAAG
GTGAACTGCCGTACAGGCAGCGGTGGTG

>NC_013592|7|5|3915410-3916157|CRT
GTGAACTGCCGCATAGGCAGCTTAGAAA	GCTACCGAGATCGCCACCTGCCGTGTATCAGC
GTGAACTGCCGCATAGGCAGCTTAGAAA	AGCATCAGCACCGCTATAACCTCAGCCAAATA
GTGAACTGCCGCATAGGCAGCTTAGAAA	ACGGCGTGGCCCGATTCCGGGGTGGTACTGGC
GTGAACTGCCGCATAGGCAGCTTAGAAA	TTGATGACACAGAAAAGCTCGACCGCAAACAA
GTGAACTGCCGCATAGGCAGCTTAGAAA	ATGGGCGGTTATCGCATGACGCCACACGCCAG
GTGAACTGCCGCATAGGCAGCTTAGAAA	ACGGTGTACGTCACGGTCATTACCTTGGTCAG
GTGAACTGCCGCATAGGCAGCTTAGAAA	TGAGATATCAGGCATGGGCCGGTAACCGCGAT
GTGAACTGCCGCATAGGCAGCTTAGAAA	TAGGCAGCCCATCGCTGACCGGGACTCCAACC
GTGAACTGCCGCATAGGCAGCTTAGAAA	TTATCGAATTCCGTATTAAAATCCTGCTGCGT
GTGAACTGCCGTGTAGGCAGCTTAGAAA	AATCAGCGGTTGCGTCATCAAGATACGTGTCA
GTGAACTGCCGTGTAGGCAGCTTAGAAA	CGATAACGGAGCGTCTTCCACTAATTGAGACG
GTGAACTGCCGCGTAGGCAGCTTAGAAA	GAGCTGGAACCAGTTGATTGACGCCATCGAAG
GTGAACTGCCGTACAGGCAGCGGTGGTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013592.1\|WP_012886067.1\|3912664_3913741_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|143500
NC_013592.1\|WP_012886072.1\|3918955_3919570_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NC_013592.1\|WP_012886063.1\|3908206_3909241_+\|tRNA-dihydrouridine(20/20a)-synthase-DusA	unknown	unknown	gnl\|CDD\|236991
NC_013592.1\|WP_012886064.1\|3909428_3909707_+\|envelope-stress-response-protein-PspG	unknown	unknown	gnl\|CDD\|181875
NC_013592.1\|WP_012886061.1\|3905709_3906846_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223999
NC_013592.1\|WP_012886062.1\|3907053_3907938_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176163
NC_013592.1\|WP_012886069.1\|3914436_3915204_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270231
NC_013592.1\|WP_012886066.1\|3911226_3912630_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|181193
NC_013592.1\|WP_012886077.1\|3924977_3926315_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|187866
NC_013592.1\|WP_012886074.1\|3922446_3923001_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NC_013592.1\|WP_012886073.1\|3919610_3920804_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NC_013592.1\|WP_012886075.1\|3923005_3924013_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NC_013592.1\|WP_012886076.1\|3924024_3924981_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|378221
NC_013592.1\|WP_012886068.1\|3913944_3914193_-\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|369322
NC_013592.1\|WP_012886070.1\|3916483_3917857_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182324
NC_013592.1\|WP_157668906.1\|3907987_3908179_+\|hypothetical-protein	unknown	unknown	unknown
NC_013592.1\|WP_012886079.1\|3930012_3931014_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NC_013592.1\|WP_012886071.1\|3918228_3918705_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NC_013592.1\|WP_012886078.1\|3926719_3930016_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NC_013592.1\|WP_012886065.1\|3910113_3911109_-\|quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|182701

Protein	Function_ID	Function_description	E-value
NC_013592.1\|WP_012886067.1\|3912664_3913741_+\|alanine-racemase	gnl\|CDD\|143500	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases. This subfamily is composed mainly of proteobacterial alanine racemases (EC 5.1.1.1), fold type III PLP-dependent enzymes that catalyze the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. hese proteins are similar to other bacterial ARs and are fold type III PLP-dependent enzymes containing contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	0
NC_013592.1\|WP_012886072.1\|3918955_3919570_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	3.63366e-40
NC_013592.1\|WP_012886063.1\|3908206_3909241_+\|tRNA-dihydrouridine(20/20a)-synthase-DusA	gnl\|CDD\|236991	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA.	0
NC_013592.1\|WP_012886064.1\|3909428_3909707_+\|envelope-stress-response-protein-PspG	gnl\|CDD\|181875	PRK09459, pspG, envelope stress response protein PspG.	2.35688e-24
NC_013592.1\|WP_012886061.1\|3905709_3906846_-\|alpha/beta-hydrolase	gnl\|CDD\|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	5.98797e-41
NC_013592.1\|WP_012886062.1\|3907053_3907938_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176163	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 5. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.1386e-94
NC_013592.1\|WP_012886069.1\|3914436_3915204_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270231	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily. This subfamily includes cyclohexadienyl dehydratase PheC. These proteins catalyze the decarboxylation of prephenate to phenylpyruvate in the alternative phenylalanine biosynthesis pathway in some proteobacteria and archaea. The PheC proteins belong to the PBPII superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. Since they the PheC proteins are so similar to periplasmic binding proteins, (PBP), it is evolutionarily plausible that several pre-existing PBP proteins might have been recruited to perform the enzymatic function.	2.10135e-115
NC_013592.1\|WP_012886066.1\|3911226_3912630_+\|replicative-DNA-helicase	gnl\|CDD\|181193	PRK08006, PRK08006, replicative DNA helicase DnaB.	0
NC_013592.1\|WP_012886077.1\|3924977_3926315_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	2.3142e-177
NC_013592.1\|WP_012886074.1\|3922446_3923001_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	2.39205e-96
NC_013592.1\|WP_012886073.1\|3919610_3920804_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NC_013592.1\|WP_012886075.1\|3923005_3924013_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NC_013592.1\|WP_012886076.1\|3924024_3924981_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	8.92772e-147
NC_013592.1\|WP_012886068.1\|3913944_3914193_-\|DUF1471-domain-containing-protein	gnl\|CDD\|369322	pfam07338, DUF1471, Protein of unknown function (DUF1471). This family consists of several hypothetical Enterobacterial proteins of around 90 residues in length. Some members of this family are annotated as ydgH precursors and contain two copies of this region, one at the N-terminus and the other at the C-terminus. The function of this family is unknown.	2.34887e-12
NC_013592.1\|WP_012886070.1\|3916483_3917857_-\|amino-acid-permease	gnl\|CDD\|182324	PRK10238, PRK10238, aromatic amino acid transporter AroP.	0
NC_013592.1\|WP_012886079.1\|3930012_3931014_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NC_013592.1\|WP_012886071.1\|3918228_3918705_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.89361e-34
NC_013592.1\|WP_012886078.1\|3926719_3930016_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NC_013592.1\|WP_012886065.1\|3910113_3911109_-\|quinone-oxidoreductase	gnl\|CDD\|182701	PRK10754, PRK10754, NADPH:quinone reductase.	0

>NC_013592.1|WP_012886069.1|3914436_3915204_-|transporter-substrate-binding-domain-containing-protein
MKKRFSLMLLLGLAGSASAASHLDQVQERGVLKVCTTGDYKPYTSLRADGSYEGIDIAMAQSLAKSLGVKVEWVKTSWKTLMPDFQSDQCDIAMGGISVTLERQKKAFFSNTLDVDGKIPLVRCDDKDKYQTVAQINQPSVRVIEPAGGTNEAFVHAHLPNAHLALHDNVTIFQQLVDKQADVMITDASEALYQQKRYPQLCAVNPASPMQYGEKAYMLPRDDMSWKLYVDQWLHLSKSTGEYRNIISEWLGKAE
>NC_013592.1|WP_012886068.1|3913944_3914193_-|DUF1471-domain-containing-protein
MKSIKTVVAAAVLATVSFGSMAATEVQSAQSRDIGTVSVTGRTLDDVQHQLSVKADAAGAKSFRIISATGDDQMRAVAELYN
>NC_013592.1|WP_012886067.1|3912664_3913741_+|alanine-racemase
MKTATAVIDRQALRHNLQRIRQMAPQSRLIAIVKANAYGHGALEAARAFSDADGYGVSRLSEALVLRAAGITKPILLLEGFFDADELPLLAEHQLETAVHSEEQLAALEQARLPHPLTVWMKLDTGMHRLGVLPEHADAFYTRLCNCTNVVQPVNIMSHFCRADEPEVDTTQRQLDCFDAFVQGKPGRQSIAASGGILLWPQAHRDQIRPGIIQYGISPLAQGDASQWQLKPAMTLTSQLIAVREHHAGEPVGYGSNWVSPRDTRLGVVAIGYGDGYPRDAKNGTPVWVNGREVPLSGRVSMDMLTVDLGPDAQDKVGDEVILWGGPLPVENVAAYNGISAYELITRLTARTQLEYIG
>NC_013592.1|WP_012886066.1|3911226_3912630_+|replicative-DNA-helicase
MAEKKSTKPAESRDRQVEGLKLPPHSIEAEQSVLGGLMLDNERWDNVAERVSTNDFFNRAHRLIFNEMQRLLEMSKPIDLITLSESLEQKGELESAGGFAYLAEMAKNTPSAANIGAYADIVRERAVVREMIAVANEIADAGYDPQGRSSEDLLDLAESRVFQIAENRASKDEGPKSIDRILEDTVSRIEQLYQRPHDGVTGVSSGYQDLDKKTAGLQKSDLIIVAARPSMGKTTFAMNLCENAAMTQEKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGLLLEKRNMYIDDSSGLTPTEVRSRARRVFREHDGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE
>NC_013592.1|WP_012886065.1|3910113_3911109_-|quinone-oxidoreductase
MAKRIQFSDHGGPGVLEYVDYTPREPGLNEVQVENHAIGINFIDTYFRAGLYSPPSFPSGLGTEAAGVVVKAGASVTHLKVGDRVVYAQSALGAYSERHNVPADKVALLPDNISFEQAAASFLKGLTVHYLLRQTYEVKPGEVFLFHAAAGGVGLIACQWAKALGAKLIGTVGSDEKAELAKQAGAWATINYRREDIVQRVLELTHEEKVSVVYDSVGKDTWEASLNCLKRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLFSYITNREELELASRELFGLIASGAINVTVPESQKFALEDAQSAHRALESRTTQGSCLLIPGYSA
>NC_013592.1|WP_012886064.1|3909428_3909707_+|envelope-stress-response-protein-PspG
MLEIFFVMGFFIMLVVTGVSLLGVMVALIAAAIVMLIAGLFTMAIKVLPWLLLAIVVVWLWRRYQGPGAASTPYGRYRKKYDSRYHRGGGDW
>NC_013592.1|WP_012886063.1|3908206_3909241_+|tRNA-dihydrouridine(20/20a)-synthase-DusA
MTQKPISENPVKSGIETPPGKPAHRQRFSIAPMLDWTDRHCRYFHRLLSHNALLYTEMVTTGAILHGKGDYLAYSDEEHPLALQLGGSDPTALAQCAVLAEQRGYDEINLNVGCPSDRVQNGRFGACLMAEAQLVADCVTAMRERVSIPVTVKTRIGIDDQDSYEFLCDFIRTVSEQGGCDTFIVHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPSLTLAINGGIKTLAEAKQHLEHVDGVMVGREAYQNPGMLAQVDRDLFDATSVVPNQAAVVQAMYPYIERELSGGAALGHITRHMLGLFQGIPGARQWRRYLSENAHKPGADASVVEHALSLVNIA
>NC_013592.1|WP_157668906.1|3907987_3908179_+|hypothetical-protein
MFSPLITLSAKERGFPLYYPFACIFPDGKAIAFCACVGVMFCILAEHHNRAACRRSGAAREMI
>NC_013592.1|WP_012886062.1|3907053_3907938_+|LysR-family-transcriptional-regulator
MANRENYNDLYLFMLVAREGSFTKAATRLGLTQSGVSRAIRELETRLGVQLLTRTTRKLSLTQAGEQLYRTTLTGFDSLDLGLATLAHFRDTPSGTVRINASQHAIDKVLLPKLATFRLHYPDIRLELISESRFVNIIDERFDAGIRLGPEVDEGMIAVQITPDMEMVVVATPDHFRHYGFPQTPADLVVHPCIAYQFADGSLYQWELWQDGKPLRHKPQGQWVFSDSYMEAAAARLGLGLAYVPEELVTPDLEQGTLIRVLQRYSHRLAGLHLYYPHRNVSPALRMVIDALKL
>NC_013592.1|WP_012886061.1|3905709_3906846_-|alpha/beta-hydrolase
MNILPRKMTAMASALLLGAALTGVSAMSYADSTNPNEPVSMVTQWDKTFAQSSKVDHRKVSFQNRYGITLVGDLYLPKDRGERKLAAIALSGPFGAVKEQSSGLYAQTLAERGFVTLAFDPSYTGESGGEPRNVASPDINTEDFSAAVDFLGLQKEVDRNRIGLLGICGFGGMALNAAAGDTRVKAVATSVMYDMSRAMGHGVGNGQDRYTTADRRAVLRYLNEQRWKDAQSGTIARSNHDIYVDKDGRVTAAERILPETLPANPNPVLVEFFDYYRVPRGFHERSINSNGAWNTTMPLSFMNMPLLSYASEITIPTLIVTGENAHSRYFAEGAFKAVGSKQKELVVVPGANHVDLYDNQAGKIPFARFEQFFNTNLK
>NC_013592.1|WP_012886070.1|3916483_3917857_-|amino-acid-permease
MNTQQDSQLKRGLKNRHIQLIALGGAVGTGLFLGIAQTIRMAGPSVLLGYAIAGVIAFFIMRQLGEMVVEEPVAGSFSHFANHYWGHFAGFMSGWNYWVLYVLVSMAELSAVGIYIQYWWPGVPTWVSAAVFFVAINAINLSTVKVYGELEFWFSIIKVAAIIGMIVFGGYLLLSGTGGPDASVANLWQHGGFFPNGVSGMVMAMAVIMFSFGGLELVGITAAEADDPQRSIPRATNQVIYRILLFYVGALAVLLSLYPWQKVVEGGSPFVLIFHALDSNLVANVLNLVVLSAALSVYNSCVYCNSRMLFGLAQQGNAPRVLLSVNRRGIPLVSLGVSALATALCVLLNYLMPGKAFELLMALVVSALVINWAMISITHLKFRQAKQRAHQETRFKSLGYPLTNILCLLFLAGILVIMAMTPGIQISVWLIPFWLLALGAGYAIKQRKKAVAVLTVE
>NC_013592.1|WP_012886071.1|3918228_3918705_+|Lrp/AsnC-family-transcriptional-regulator
MYNIDDFDLKILTLLQANGRLTNQELSDLVGLSASQCSRRRIALEQAQLILGYHARLAPDAVGLELMGLIEVRLINHTQECVDSFHQMLGEVDAIIDAYKTTGDADYMLKVAVADLHGLSALISEILARNKSVAHLKTSVVLNRLKENGLMAPAASAL
>NC_013592.1|WP_012886072.1|3918955_3919570_+|YitT-family-protein
MDNVITPQPVSHTLLEDVLALLIGTLMVSFGVILLRQAGALTGGTAGMAFLLHYATHISFGTAFFLLNLPFYYLAIRRMGWAFTVKTFCAVAMVSLFSDLHPLFIHFDHLQPVYATLFGNLIMGLGFIVLFRHRASLGGVNILALYLQDKSGIRAGKFQMAVDVTIVLASLFVVSIPMLIASVVGAAALNLIIAMNHRPGRYIA
>NC_013592.1|WP_012886073.1|3919610_3920804_+|aspartate/tyrosine/aromatic-aminotransferase
MFQNVDAYAGDPILSLMEKFKQDPRTDKVNLSIGLYYDGQGVIPQLQAVNAAETQLQAEPQHASVYLPMEGLAAYRSAVQTLLFGEHHPALTAQRVATIQTLGGSGALKVGADFLKRYFPDSEVWVSDPTWENHIAIFSGAGFQVHTYPYFDADTLGVNVEKMISALKQLPPRSIVLLHPCCHNPTGSDLTHAEWDRVIEVLIKGELVPFLDIAYQGFGGGMDDDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVVCEDQDAASRVLGQLKATVRRNYSSPPNFGAQVVSRVLNDSTLNASWHAEVEAMRLRIHEMRQTLVDELKKALPERNFDYLLTQRGMFSYTGFSAAQVDRLREEFGVYLIASGRVCIAGLNHHNVQRVAAAFAAVQ
>NC_013592.1|WP_012886074.1|3922446_3923001_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYIEIRVLPDPEFSAVQLLSALFAKLHRALGQRATGDIGVSFPDAGKTLGERLRLHGSVQALAALEQTGWLKGLRDYSTITDVLTVPTGAQYRTVRRVQVKSSAERLRRRAVSKGRMTADEAAARIPYAAEKRTSLPYLPLRSLSSGQTFLLFVEHGPLQEKPVAGVFSSYGLSAIATIPWF
>NC_013592.1|WP_012886075.1|3923005_3924013_-|type-I-F-CRISPR-associated-protein-Csy3
MAKAATTLKTASVLAFERKLANSDALMLAGNWQQENWQPVVIQEKSVRGTISNRLKNAISSDPAKLDAEIQKPNLQTVDVAALPFDADTLKVAFTLRVLGNLALPSVCNDQDYQQALTDLINGYAREQGFGVLAARYAENIASGRFLWRNRIGAEAVQVVVTHDDKRWEFNGEDYSLRQFSQPSGALAELAHAIEQALAGSDSAFFRVEAQVKLGNGQEVFPSQELVLDERARNGKSKILYQVNGVAAMHSQKIGNALRTVDDWHPEAAETGPIAVEPYGSVTSRGRAYRQPKDKMDFYTLLDNWVIKGNVPEVAQQHYVIATLIRGGVFGEKGE
>NC_013592.1|WP_012886076.1|3924024_3924981_-|type-I-F-CRISPR-associated-protein-Csy2
MSKLMILRRIVVENANAIAGHTYGFPAISHFLGFTHALSRQLQASHGLRLEGCGVVCHQHQVHAYGNGWNRSFALTRNPLTKEEKTAAFNEEGRMHLTVSLLIECHGMLPGEDGREALRQQVRQQAQQQRLAGGLTVDIEQVSFHDIPARGAATRGLMRRLLPGFVLVDRTALLSSHLETRQQADAQADMLDAWLDFAALKYQAVRSSDDAVSWQPLPKPDRGYLVPLMTGYRAISPLYNPGEVEKTRDPSTPFCFAEAIYGVGEWRGAHRIDDINRIFWRYLYQHDDQHHTYRCLQTGQGTDSAADDYDEFELNDFE
>NC_013592.1|WP_012886077.1|3924977_3926315_-|type-I-F-CRISPR-associated-protein-Csy1
MSSEGLQAFILSYIETRKQAKLDAFDKAADKQRAALSGEALAAAEVTLLQQRREIEQAYEVRTWLTDAASRAGQISLVTHALKFTHSDAKGSSVFSTEPATATDVLSTASLAQPAIDAVGNAAALDVAKLLQTEHQGDSLVAALQRGDHRALEALAENAEQLTQWLAGFGQVLSDKQPSSHKLAKQIYFPVGDGEYHLLSPLYSSSLSQALDQRLNAVRFGEQAKATREARRQKRWHDEVDVSYPGIAVQNMGGTKPQNISALNSARSGRSYLLNCAPPQWLSQIKPPLDSDTIFRNNGEVDALTYVDRRDMRQFLLSVKDVENNRDIRNQRRRYLDQLIDTLFGYVVTVQNLRPAGWSKDSRLNVPLQLWLDPFRCRQDDAFCYAREGGDWKEQVAREFGLWLNARLQHEKLIFGEVERREWSTAALFKQRLRENERWLKEELA
>NC_013592.1|WP_012886078.1|3926719_3930016_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISECNKRALVETRRVLDQFAERKGERTWQTAITEEGLKTLRTLLRKTARRNTAVACHWIRSANHTELLWIVGNLRRFNPQGSVPTNRTERDILRSQDENPWHSAEAFSLLAAIAGLFHDIGKANALFQAGLRGKGPRSQPLRHEWVSLRLFQAFVGEQDDTGWLTALAAIRAEEEVALLARLQQDTKILKPSPFNSLPPLAQVVGWLIVSHHRLPMFWDDKSGNPSPDLSYIDEWLTTQVSPNWNAINHLRPDISAQEWQQVWQFPHGTPLQSRVWCEKARKFATRALKLPSLMTFGQLEQRLTVHLARLSLMLADHHYSSSDATPGWQDPRYTVWANTEKNVFKQRLDEHCVGVAQNALLLGRSLPHLRDTLPAITRHKGFRQRSTDARFRWQDKAFDQVCAIREQAARHGFFGVNMASTGRGKTLANARIMYALADESVGCRFSVALGLRTLTLQTGDALRQRLTLDEDDLAVLIGSQAVQELHELRQQEQETRVVQTGSESAESLFIEHQYVSYDGSLDDGRLKTWLKKSPTLHQLLSAPVLVTTIDHLMPATESLRGGHQIAPMLRLLTSDLVLDEPDDFGLEDLPALCRLVNWVGMLGSRVLLSSATLPPALIRALFEAYLKGREAWQQAYGEPGTPLSICCGWFDEFDSQCHQLADTDAFAAQHKAFVAGRIDKLQQQEQRLRWAEIEPVASPTREASAVCRAVAQTLHQRLFALHQHHHQTHSGGKTVSLGLIRMANINPLVAVARALMEMPSLPDYCVHYCVYHSQHPLAMRSHIEARLDAALMRKDPQALWQVAEIRDAIAQQPQRHHLFVVLATSVAEVGRDHDYDWAIAEPSSMRSFIQLAGRILRHRQRDEYVPTSPNFYLLSHNVRALRHGPAGDKQTIAFCRPGFESEHGFTLASHDLREILKPEDYQHISAAPRITEPPLDLKKLTLISLEHAALRLMLLGRTKPRPTDKPAAVLWWKVSLHWNGELQRHTPFRRSDPQQRYWLRLEDESEKTRFMLQDDGPSGWKEIDVIRSVEQAMADGVSLWVEMDYTTLYLQLAEEKQWELARVSDRFGEISISTRDNLAWCWHEWLGVFGALK
>NC_013592.1|WP_012886079.1|3930012_3931014_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MDNVFSPSDLKTILHSKRANIYYLQHCRILVNGGRVEYVTEEGNQSLYWNIPIANTSVVMLGTGTSVTQAAMREFARAGVMVGFCGGGGTPLFAANEAEVAVSWLSPQSEYRPTEYLQDWVSFWFNEEQRLAAAIAFQQVRIGQIRQHWLGGRLARESRFAIKPEHVEALLNRYQQGLTACRTSNDVLVQEAMMTKALYRLAANAVSYGDFTRAKRGGGTDLANRFLDHGNYLAYGLAAVALWVLGLPHGLAVLHGKTRRGGLVFDVADLIKDALILPQAFIAAMEGEDEQDFRQRCLTSFRQAEALDVMIDSLQQVAQQLSQVAKTGSQGAQ

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Crispr_ID: NC_013592_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013592_8

3921209-3922317

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTACTCGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTNNNCGGCAGTGAAC	CRT

18 spacers

cas6f,cas7f,cas5f,cas8f,cas3f,cas1

The CRISPR arrays of NC_013592_8

>merge|NC_013592|8|3921209-3922317|CRISPRCasFinder,CRT
GTCAACCTCTGCCTACTCGGCAGTGAACTGTTAATGTTGACGACAAAAGCCCTTACGAGATTTCTAAGCTGCCTACTCGGCAGTGAACTGGCACCTTAGCAGCGTTGATTGTCCGGGCGCTTTCTAAGCTGCCTACGCGGCAGTGAACGATATTCATATCGACGTGAGCACGTATTGTAATTTCTAAGCTGCCTACGCGGCAGTGAACGAACGTAATTTGCCGGAATAGCGATAGTCATGTTTCTAAGCTGCCTATGCGGCAGTGAACCACGCGAAGAAGCCGACCAGCTTATTTTGACTTTTCTAAGCTGCCTATGCGGCAGTGAACAATTCGGTCATTGGTTTTGCCTTATTTCTTGATTTCTAAGCTGCCTACACGGCAGTGAACATTACCCGAAGGCGCCCTTCTCAAATCACTGGCTTCTAAGCTGCCTACACGGCAGTGAACGCCGACACTTTCGGCTTCAATCGTGCGCCGCATTTCTAAGCTGCCTACACGGCAGTGAACGTGTGCGCCAGCCGGACAATCACATTTTCAATTTTCTAAGCTGCCTGTGCGGCAGTGAACGCCCCCGCACTGCCGGATGCGCTACATGCAGATTTCTAAGCTGCCTGTGCGGCAGTGAACCGAATCATTTTCGGCGCGCAGGCGCTTATTCTTTTCTAAGCTGCCTGTGCGGCAGTGAACATCGCCCCGTTCCACAATGGCCCCACGTATCATTTCTAAGCTGCCTACACAGCAGTGAACATGAGGATGTAACCGATGGGATTCTTTGGCTTTTTTCTAAGCTGCCTACGCGGCAGTGAACGCGCTGATGCGGGTTTGGCCGTTGACCTGCCGTTTCTAAGCTGCCTGTGCGGCAGTGAACTGATACAGCAGGCGACAACGATTGTACACGCTTTTCTAAGCTGCCTGTGCGGCAGTGAACGGTTAACTCCGTGCGGTTCTTCAGCATTCCCATTTCTAAGCTGCCTGTGCGGCAGTGAACCAGGCGGCGCGCCGGGTGATCTGCCCGTATACTTTCTAAGCTGCCTGTGCGGCAGTGAACGAGACCGGCAATATTCCCGGTGCGCTGATGCATTTCTAAGCTGCCTGTGCGGCAGTGAAC

>NC_013592|8|8|3921209-3922317|CRISPRCasFinder
GTCAACCTCTGCCTACTCGGCAGTGAAC	TGTTAATGTTGACGACAAAAGCCCTTACGAGA
TTTCTAAGCTGCCTACTCGGCAGTGAAC	TGGCACCTTAGCAGCGTTGATTGTCCGGGCGC
TTTCTAAGCTGCCTACGCGGCAGTGAAC	GATATTCATATCGACGTGAGCACGTATTGTAA
TTTCTAAGCTGCCTACGCGGCAGTGAAC	GAACGTAATTTGCCGGAATAGCGATAGTCATG
TTTCTAAGCTGCCTATGCGGCAGTGAAC	CACGCGAAGAAGCCGACCAGCTTATTTTGACT
TTTCTAAGCTGCCTATGCGGCAGTGAAC	AATTCGGTCATTGGTTTTGCCTTATTTCTTGA
TTTCTAAGCTGCCTACACGGCAGTGAAC	ATTACCCGAAGGCGCCCTTCTCAAATCACTGG
CTTCTAAGCTGCCTACACGGCAGTGAAC	GCCGACACTTTCGGCTTCAATCGTGCGCCGCA
TTTCTAAGCTGCCTACACGGCAGTGAAC	GTGTGCGCCAGCCGGACAATCACATTTTCAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GCCCCCGCACTGCCGGATGCGCTACATGCAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CGAATCATTTTCGGCGCGCAGGCGCTTATTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATCGCCCCGTTCCACAATGGCCCCACGTATCA
TTTCTAAGCTGCCTACACAGCAGTGAAC	ATGAGGATGTAACCGATGGGATTCTTTGGCTTT
TTTCTAAGCTGCCTACGCGGCAGTGAAC	GCGCTGATGCGGGTTTGGCCGTTGACCTGCCG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGATACAGCAGGCGACAACGATTGTACACGCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GGTTAACTCCGTGCGGTTCTTCAGCATTCCCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CAGGCGGCGCGCCGGGTGATCTGCCCGTATAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GAGACCGGCAATATTCCCGGTGCGCTGATGCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

>NC_013592|8|6|3921209-3922317|CRT
GTCAACCTCTGCCTACTCGGCAGTGAAC	TGTTAATGTTGACGACAAAAGCCCTTACGAGA
TTTCTAAGCTGCCTACTCGGCAGTGAAC	TGGCACCTTAGCAGCGTTGATTGTCCGGGCGC
TTTCTAAGCTGCCTACGCGGCAGTGAAC	GATATTCATATCGACGTGAGCACGTATTGTAA
TTTCTAAGCTGCCTACGCGGCAGTGAAC	GAACGTAATTTGCCGGAATAGCGATAGTCATG
TTTCTAAGCTGCCTATGCGGCAGTGAAC	CACGCGAAGAAGCCGACCAGCTTATTTTGACT
TTTCTAAGCTGCCTATGCGGCAGTGAAC	AATTCGGTCATTGGTTTTGCCTTATTTCTTGA
TTTCTAAGCTGCCTACACGGCAGTGAAC	ATTACCCGAAGGCGCCCTTCTCAAATCACTGG
CTTCTAAGCTGCCTACACGGCAGTGAAC	GCCGACACTTTCGGCTTCAATCGTGCGCCGCA
TTTCTAAGCTGCCTACACGGCAGTGAAC	GTGTGCGCCAGCCGGACAATCACATTTTCAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GCCCCCGCACTGCCGGATGCGCTACATGCAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CGAATCATTTTCGGCGCGCAGGCGCTTATTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATCGCCCCGTTCCACAATGGCCCCACGTATCA
TTTCTAAGCTGCCTACACAGCAGTGAAC	ATGAGGATGTAACCGATGGGATTCTTTGGCTTT
TTTCTAAGCTGCCTACGCGGCAGTGAAC	GCGCTGATGCGGGTTTGGCCGTTGACCTGCCG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGATACAGCAGGCGACAACGATTGTACACGCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GGTTAACTCCGTGCGGTTCTTCAGCATTCCCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CAGGCGGCGCGCCGGGTGATCTGCCCGTATAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GAGACCGGCAATATTCCCGGTGCGCTGATGCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_013592.1\|WP_012886067.1\|3912664_3913741_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|143500
NC_013592.1\|WP_012886078.1\|3926719_3930016_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NC_013592.1\|WP_012886064.1\|3909428_3909707_+\|envelope-stress-response-protein-PspG	unknown	unknown	gnl\|CDD\|181875
NC_013592.1\|WP_012886068.1\|3913944_3914193_-\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|369322
NC_013592.1\|WP_012886075.1\|3923005_3924013_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NC_013592.1\|WP_012886069.1\|3914436_3915204_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270231
NC_013592.1\|WP_012886066.1\|3911226_3912630_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|181193
NC_013592.1\|WP_012886077.1\|3924977_3926315_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|187866
NC_013592.1\|WP_012886074.1\|3922446_3923001_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NC_013592.1\|WP_012886073.1\|3919610_3920804_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NC_013592.1\|WP_012886080.1\|3933506_3935177_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NC_013592.1\|WP_012886076.1\|3924024_3924981_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|378221
NC_013592.1\|WP_012886072.1\|3918955_3919570_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NC_013592.1\|WP_012886070.1\|3916483_3917857_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182324
NC_013592.1\|WP_012886079.1\|3930012_3931014_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NC_013592.1\|WP_012886082.1\|3937810_3938230_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|376651
NC_013592.1\|WP_012886071.1\|3918228_3918705_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NC_013592.1\|WP_041164602.1\|3936137_3937748_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NC_013592.1\|WP_012886083.1\|3938652_3941484_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NC_013592.1\|WP_012886065.1\|3910113_3911109_-\|quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|182701

Protein	Function_ID	Function_description	E-value
NC_013592.1\|WP_012886067.1\|3912664_3913741_+\|alanine-racemase	gnl\|CDD\|143500	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases. This subfamily is composed mainly of proteobacterial alanine racemases (EC 5.1.1.1), fold type III PLP-dependent enzymes that catalyze the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. hese proteins are similar to other bacterial ARs and are fold type III PLP-dependent enzymes containing contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	0
NC_013592.1\|WP_012886078.1\|3926719_3930016_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NC_013592.1\|WP_012886064.1\|3909428_3909707_+\|envelope-stress-response-protein-PspG	gnl\|CDD\|181875	PRK09459, pspG, envelope stress response protein PspG.	2.35688e-24
NC_013592.1\|WP_012886068.1\|3913944_3914193_-\|DUF1471-domain-containing-protein	gnl\|CDD\|369322	pfam07338, DUF1471, Protein of unknown function (DUF1471). This family consists of several hypothetical Enterobacterial proteins of around 90 residues in length. Some members of this family are annotated as ydgH precursors and contain two copies of this region, one at the N-terminus and the other at the C-terminus. The function of this family is unknown.	2.34887e-12
NC_013592.1\|WP_012886075.1\|3923005_3924013_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NC_013592.1\|WP_012886069.1\|3914436_3915204_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270231	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily. This subfamily includes cyclohexadienyl dehydratase PheC. These proteins catalyze the decarboxylation of prephenate to phenylpyruvate in the alternative phenylalanine biosynthesis pathway in some proteobacteria and archaea. The PheC proteins belong to the PBPII superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. Since they the PheC proteins are so similar to periplasmic binding proteins, (PBP), it is evolutionarily plausible that several pre-existing PBP proteins might have been recruited to perform the enzymatic function.	2.10135e-115
NC_013592.1\|WP_012886066.1\|3911226_3912630_+\|replicative-DNA-helicase	gnl\|CDD\|181193	PRK08006, PRK08006, replicative DNA helicase DnaB.	0
NC_013592.1\|WP_012886077.1\|3924977_3926315_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	2.3142e-177
NC_013592.1\|WP_012886074.1\|3922446_3923001_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	2.39205e-96
NC_013592.1\|WP_012886073.1\|3919610_3920804_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NC_013592.1\|WP_012886080.1\|3933506_3935177_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	9.82204e-100
NC_013592.1\|WP_012886076.1\|3924024_3924981_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	8.92772e-147
NC_013592.1\|WP_012886072.1\|3918955_3919570_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	3.63366e-40
NC_013592.1\|WP_012886070.1\|3916483_3917857_-\|amino-acid-permease	gnl\|CDD\|182324	PRK10238, PRK10238, aromatic amino acid transporter AroP.	0
NC_013592.1\|WP_012886079.1\|3930012_3931014_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NC_013592.1\|WP_012886082.1\|3937810_3938230_-\|YjbQ-family-protein	gnl\|CDD\|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	2.4271e-59
NC_013592.1\|WP_012886071.1\|3918228_3918705_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.89361e-34
NC_013592.1\|WP_041164602.1\|3936137_3937748_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.32728e-59
NC_013592.1\|WP_012886083.1\|3938652_3941484_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NC_013592.1\|WP_012886065.1\|3910113_3911109_-\|quinone-oxidoreductase	gnl\|CDD\|182701	PRK10754, PRK10754, NADPH:quinone reductase.	0

>NC_013592.1|WP_012886073.1|3919610_3920804_+|aspartate/tyrosine/aromatic-aminotransferase
MFQNVDAYAGDPILSLMEKFKQDPRTDKVNLSIGLYYDGQGVIPQLQAVNAAETQLQAEPQHASVYLPMEGLAAYRSAVQTLLFGEHHPALTAQRVATIQTLGGSGALKVGADFLKRYFPDSEVWVSDPTWENHIAIFSGAGFQVHTYPYFDADTLGVNVEKMISALKQLPPRSIVLLHPCCHNPTGSDLTHAEWDRVIEVLIKGELVPFLDIAYQGFGGGMDDDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVVCEDQDAASRVLGQLKATVRRNYSSPPNFGAQVVSRVLNDSTLNASWHAEVEAMRLRIHEMRQTLVDELKKALPERNFDYLLTQRGMFSYTGFSAAQVDRLREEFGVYLIASGRVCIAGLNHHNVQRVAAAFAAVQ
>NC_013592.1|WP_012886072.1|3918955_3919570_+|YitT-family-protein
MDNVITPQPVSHTLLEDVLALLIGTLMVSFGVILLRQAGALTGGTAGMAFLLHYATHISFGTAFFLLNLPFYYLAIRRMGWAFTVKTFCAVAMVSLFSDLHPLFIHFDHLQPVYATLFGNLIMGLGFIVLFRHRASLGGVNILALYLQDKSGIRAGKFQMAVDVTIVLASLFVVSIPMLIASVVGAAALNLIIAMNHRPGRYIA
>NC_013592.1|WP_012886071.1|3918228_3918705_+|Lrp/AsnC-family-transcriptional-regulator
MYNIDDFDLKILTLLQANGRLTNQELSDLVGLSASQCSRRRIALEQAQLILGYHARLAPDAVGLELMGLIEVRLINHTQECVDSFHQMLGEVDAIIDAYKTTGDADYMLKVAVADLHGLSALISEILARNKSVAHLKTSVVLNRLKENGLMAPAASAL
>NC_013592.1|WP_012886070.1|3916483_3917857_-|amino-acid-permease
MNTQQDSQLKRGLKNRHIQLIALGGAVGTGLFLGIAQTIRMAGPSVLLGYAIAGVIAFFIMRQLGEMVVEEPVAGSFSHFANHYWGHFAGFMSGWNYWVLYVLVSMAELSAVGIYIQYWWPGVPTWVSAAVFFVAINAINLSTVKVYGELEFWFSIIKVAAIIGMIVFGGYLLLSGTGGPDASVANLWQHGGFFPNGVSGMVMAMAVIMFSFGGLELVGITAAEADDPQRSIPRATNQVIYRILLFYVGALAVLLSLYPWQKVVEGGSPFVLIFHALDSNLVANVLNLVVLSAALSVYNSCVYCNSRMLFGLAQQGNAPRVLLSVNRRGIPLVSLGVSALATALCVLLNYLMPGKAFELLMALVVSALVINWAMISITHLKFRQAKQRAHQETRFKSLGYPLTNILCLLFLAGILVIMAMTPGIQISVWLIPFWLLALGAGYAIKQRKKAVAVLTVE
>NC_013592.1|WP_012886069.1|3914436_3915204_-|transporter-substrate-binding-domain-containing-protein
MKKRFSLMLLLGLAGSASAASHLDQVQERGVLKVCTTGDYKPYTSLRADGSYEGIDIAMAQSLAKSLGVKVEWVKTSWKTLMPDFQSDQCDIAMGGISVTLERQKKAFFSNTLDVDGKIPLVRCDDKDKYQTVAQINQPSVRVIEPAGGTNEAFVHAHLPNAHLALHDNVTIFQQLVDKQADVMITDASEALYQQKRYPQLCAVNPASPMQYGEKAYMLPRDDMSWKLYVDQWLHLSKSTGEYRNIISEWLGKAE
>NC_013592.1|WP_012886068.1|3913944_3914193_-|DUF1471-domain-containing-protein
MKSIKTVVAAAVLATVSFGSMAATEVQSAQSRDIGTVSVTGRTLDDVQHQLSVKADAAGAKSFRIISATGDDQMRAVAELYN
>NC_013592.1|WP_012886067.1|3912664_3913741_+|alanine-racemase
MKTATAVIDRQALRHNLQRIRQMAPQSRLIAIVKANAYGHGALEAARAFSDADGYGVSRLSEALVLRAAGITKPILLLEGFFDADELPLLAEHQLETAVHSEEQLAALEQARLPHPLTVWMKLDTGMHRLGVLPEHADAFYTRLCNCTNVVQPVNIMSHFCRADEPEVDTTQRQLDCFDAFVQGKPGRQSIAASGGILLWPQAHRDQIRPGIIQYGISPLAQGDASQWQLKPAMTLTSQLIAVREHHAGEPVGYGSNWVSPRDTRLGVVAIGYGDGYPRDAKNGTPVWVNGREVPLSGRVSMDMLTVDLGPDAQDKVGDEVILWGGPLPVENVAAYNGISAYELITRLTARTQLEYIG
>NC_013592.1|WP_012886066.1|3911226_3912630_+|replicative-DNA-helicase
MAEKKSTKPAESRDRQVEGLKLPPHSIEAEQSVLGGLMLDNERWDNVAERVSTNDFFNRAHRLIFNEMQRLLEMSKPIDLITLSESLEQKGELESAGGFAYLAEMAKNTPSAANIGAYADIVRERAVVREMIAVANEIADAGYDPQGRSSEDLLDLAESRVFQIAENRASKDEGPKSIDRILEDTVSRIEQLYQRPHDGVTGVSSGYQDLDKKTAGLQKSDLIIVAARPSMGKTTFAMNLCENAAMTQEKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGLLLEKRNMYIDDSSGLTPTEVRSRARRVFREHDGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE
>NC_013592.1|WP_012886065.1|3910113_3911109_-|quinone-oxidoreductase
MAKRIQFSDHGGPGVLEYVDYTPREPGLNEVQVENHAIGINFIDTYFRAGLYSPPSFPSGLGTEAAGVVVKAGASVTHLKVGDRVVYAQSALGAYSERHNVPADKVALLPDNISFEQAAASFLKGLTVHYLLRQTYEVKPGEVFLFHAAAGGVGLIACQWAKALGAKLIGTVGSDEKAELAKQAGAWATINYRREDIVQRVLELTHEEKVSVVYDSVGKDTWEASLNCLKRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLFSYITNREELELASRELFGLIASGAINVTVPESQKFALEDAQSAHRALESRTTQGSCLLIPGYSA
>NC_013592.1|WP_012886064.1|3909428_3909707_+|envelope-stress-response-protein-PspG
MLEIFFVMGFFIMLVVTGVSLLGVMVALIAAAIVMLIAGLFTMAIKVLPWLLLAIVVVWLWRRYQGPGAASTPYGRYRKKYDSRYHRGGGDW
>NC_013592.1|WP_012886074.1|3922446_3923001_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYIEIRVLPDPEFSAVQLLSALFAKLHRALGQRATGDIGVSFPDAGKTLGERLRLHGSVQALAALEQTGWLKGLRDYSTITDVLTVPTGAQYRTVRRVQVKSSAERLRRRAVSKGRMTADEAAARIPYAAEKRTSLPYLPLRSLSSGQTFLLFVEHGPLQEKPVAGVFSSYGLSAIATIPWF
>NC_013592.1|WP_012886075.1|3923005_3924013_-|type-I-F-CRISPR-associated-protein-Csy3
MAKAATTLKTASVLAFERKLANSDALMLAGNWQQENWQPVVIQEKSVRGTISNRLKNAISSDPAKLDAEIQKPNLQTVDVAALPFDADTLKVAFTLRVLGNLALPSVCNDQDYQQALTDLINGYAREQGFGVLAARYAENIASGRFLWRNRIGAEAVQVVVTHDDKRWEFNGEDYSLRQFSQPSGALAELAHAIEQALAGSDSAFFRVEAQVKLGNGQEVFPSQELVLDERARNGKSKILYQVNGVAAMHSQKIGNALRTVDDWHPEAAETGPIAVEPYGSVTSRGRAYRQPKDKMDFYTLLDNWVIKGNVPEVAQQHYVIATLIRGGVFGEKGE
>NC_013592.1|WP_012886076.1|3924024_3924981_-|type-I-F-CRISPR-associated-protein-Csy2
MSKLMILRRIVVENANAIAGHTYGFPAISHFLGFTHALSRQLQASHGLRLEGCGVVCHQHQVHAYGNGWNRSFALTRNPLTKEEKTAAFNEEGRMHLTVSLLIECHGMLPGEDGREALRQQVRQQAQQQRLAGGLTVDIEQVSFHDIPARGAATRGLMRRLLPGFVLVDRTALLSSHLETRQQADAQADMLDAWLDFAALKYQAVRSSDDAVSWQPLPKPDRGYLVPLMTGYRAISPLYNPGEVEKTRDPSTPFCFAEAIYGVGEWRGAHRIDDINRIFWRYLYQHDDQHHTYRCLQTGQGTDSAADDYDEFELNDFE
>NC_013592.1|WP_012886077.1|3924977_3926315_-|type-I-F-CRISPR-associated-protein-Csy1
MSSEGLQAFILSYIETRKQAKLDAFDKAADKQRAALSGEALAAAEVTLLQQRREIEQAYEVRTWLTDAASRAGQISLVTHALKFTHSDAKGSSVFSTEPATATDVLSTASLAQPAIDAVGNAAALDVAKLLQTEHQGDSLVAALQRGDHRALEALAENAEQLTQWLAGFGQVLSDKQPSSHKLAKQIYFPVGDGEYHLLSPLYSSSLSQALDQRLNAVRFGEQAKATREARRQKRWHDEVDVSYPGIAVQNMGGTKPQNISALNSARSGRSYLLNCAPPQWLSQIKPPLDSDTIFRNNGEVDALTYVDRRDMRQFLLSVKDVENNRDIRNQRRRYLDQLIDTLFGYVVTVQNLRPAGWSKDSRLNVPLQLWLDPFRCRQDDAFCYAREGGDWKEQVAREFGLWLNARLQHEKLIFGEVERREWSTAALFKQRLRENERWLKEELA
>NC_013592.1|WP_012886078.1|3926719_3930016_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISECNKRALVETRRVLDQFAERKGERTWQTAITEEGLKTLRTLLRKTARRNTAVACHWIRSANHTELLWIVGNLRRFNPQGSVPTNRTERDILRSQDENPWHSAEAFSLLAAIAGLFHDIGKANALFQAGLRGKGPRSQPLRHEWVSLRLFQAFVGEQDDTGWLTALAAIRAEEEVALLARLQQDTKILKPSPFNSLPPLAQVVGWLIVSHHRLPMFWDDKSGNPSPDLSYIDEWLTTQVSPNWNAINHLRPDISAQEWQQVWQFPHGTPLQSRVWCEKARKFATRALKLPSLMTFGQLEQRLTVHLARLSLMLADHHYSSSDATPGWQDPRYTVWANTEKNVFKQRLDEHCVGVAQNALLLGRSLPHLRDTLPAITRHKGFRQRSTDARFRWQDKAFDQVCAIREQAARHGFFGVNMASTGRGKTLANARIMYALADESVGCRFSVALGLRTLTLQTGDALRQRLTLDEDDLAVLIGSQAVQELHELRQQEQETRVVQTGSESAESLFIEHQYVSYDGSLDDGRLKTWLKKSPTLHQLLSAPVLVTTIDHLMPATESLRGGHQIAPMLRLLTSDLVLDEPDDFGLEDLPALCRLVNWVGMLGSRVLLSSATLPPALIRALFEAYLKGREAWQQAYGEPGTPLSICCGWFDEFDSQCHQLADTDAFAAQHKAFVAGRIDKLQQQEQRLRWAEIEPVASPTREASAVCRAVAQTLHQRLFALHQHHHQTHSGGKTVSLGLIRMANINPLVAVARALMEMPSLPDYCVHYCVYHSQHPLAMRSHIEARLDAALMRKDPQALWQVAEIRDAIAQQPQRHHLFVVLATSVAEVGRDHDYDWAIAEPSSMRSFIQLAGRILRHRQRDEYVPTSPNFYLLSHNVRALRHGPAGDKQTIAFCRPGFESEHGFTLASHDLREILKPEDYQHISAAPRITEPPLDLKKLTLISLEHAALRLMLLGRTKPRPTDKPAAVLWWKVSLHWNGELQRHTPFRRSDPQQRYWLRLEDESEKTRFMLQDDGPSGWKEIDVIRSVEQAMADGVSLWVEMDYTTLYLQLAEEKQWELARVSDRFGEISISTRDNLAWCWHEWLGVFGALK
>NC_013592.1|WP_012886079.1|3930012_3931014_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MDNVFSPSDLKTILHSKRANIYYLQHCRILVNGGRVEYVTEEGNQSLYWNIPIANTSVVMLGTGTSVTQAAMREFARAGVMVGFCGGGGTPLFAANEAEVAVSWLSPQSEYRPTEYLQDWVSFWFNEEQRLAAAIAFQQVRIGQIRQHWLGGRLARESRFAIKPEHVEALLNRYQQGLTACRTSNDVLVQEAMMTKALYRLAANAVSYGDFTRAKRGGGTDLANRFLDHGNYLAYGLAAVALWVLGLPHGLAVLHGKTRRGGLVFDVADLIKDALILPQAFIAAMEGEDEQDFRQRCLTSFRQAEALDVMIDSLQQVAQQLSQVAKTGSQGAQ
>NC_013592.1|WP_012886080.1|3933506_3935177_-|HAMP-domain-containing-protein
MRLSDWRIGYRLGAGFAVLAVMLVFVGMLSMAKLSTFHDDARNIVQEIYPQTVDANALIENVNEGVRIFQQLLLVSGDDRIKAVSDQIAPVSKEITRLMDALEREANESNNAKIQQLIGDIRRIRAQFLESGQKMVALVKANNREEALDEFNQHLNPAQREYRNAVRQLVDYQDNAMMSTVDAMSASYHDIRLVLLTILGAGVLLSIWVAMAITRSVTQPIQQALLMADRVSQGDLTAQISTTRKDEAGLLLQALDHMNASLRQIVGQVRDGAEAISTAASQIAAGNQDLSSRTEEQASSLEQTAASVEELVSTIKNTADNTQQATSIANLASSAAHRSGEVMLSVTHKMRGIRESSMRMAEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKELIDDSVDKVQEGMDLVDNAESTLTDLTSHVNDVHSIINEISQASHEQSDGMSQINIAVGQIDTTTQQNAALVEESASAALSLQSQASLLAEAVSAFRLTTQGNSGATSPARPSAVLSPALPEKRAAAAAGSHSDWTSF
>NC_013592.1|WP_041164602.1|3936137_3937748_+|GGDEF-domain-containing-protein
MRVKNLLRINLLHLILFISLASMFITLLNSYFTFYHVQKKLLIEQANKVNSSYSSKLSTTVDNFFSISEEQLSYGARLLVTHIQSGNLHTLQTELQRIHRLSHVFNSMLVVTENGQIIASSPTSLNLTGLTLHSRQHIAANKGKRFFISSPYTSLSGNYIIFISQPILDDAGNYLGYVGGSLYLNNRRVLNEFMNTQFSNDSFNTYVIDKEGTIIYHHDIAQVGTKFTDPTLFSVISNQDKGSFMMPDEQGIPSPASFIRTQKSGWIIITQQSFHSIEEALNNVMLDVLKQGTPLGIATLMILSILVYYIAKPLRQLAKSASSMEQPGVIGKIRAVKAWYQEIEQLKRVLLMGTVLLHKRIGRLSSEAHTDPLSGMLNRRGMLESMEEIRGEYKKVSVIAIDIDHFKSINDSFGHDVGDMVIRKLSQQIRKNFRKTDLVCRIGGEEFLILLPGADIHVATVIAERLRNNVANTVYVPGSQHHQVTISIGVTTFNPQKSALDIAIKTADNALYKAKNGGRNQVVVEYLSDDISLAQH
>NC_013592.1|WP_012886082.1|3937810_3938230_-|YjbQ-family-protein
MWKQYDIRLKPRSRGFHLITDEVLGQVTDLRQVKVGLLHVFICHTSASLTVNENADPTVRQDFENFFNQLVPEDEPYYRHTYEGSDDMPAHLKSSLLGSSLMLPVRNGRLHVGTWQGIYLCEHRNHGGSRSLVVTLQGE
>NC_013592.1|WP_012886083.1|3938652_3941484_-|excinuclease-ABC-subunit-UvrA
MDKIEIRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPEHDIPLDAQTVSQMVDNALSQPEGKRLMLLAPIVKERKGEHTKTLENLATQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRSDLAQRLAESFETALELSGGTAVVADMDDPNAPELLFSANFACPVCGYSMHELEPRLFSFNNPAGACPTCDGLGVQQFFDPARVVQNGELSLAGGAIRGWDRRNFYYFQMLRSLAEHYEFDVEAPFDSLSPAIQKVILYGSGKENIEFKYINDRGDTSVRRHPFEGVLNNMERRYKETESTAVREELAKFISNRPCASCNGTRLREEARHVYVEQTTLPQIADMSIGHAMEFFHNIKLSGQRAKIAEKVLKEIGDRLRFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNTVIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAEGTATQIMAVPESLTGQYLSGARKIEIPAQRVQADPSKVLKLIGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGGELNEPAPYREIQGLEQFDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAGVPEARSRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKSIHEVLEMTIEDAREFFDAIPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAQCEQSHTARFLKPILDRG

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Crispr_ID: NC_013592_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013592_9

3931312-3933079

TypeI-F

I-F

Consensus_repeat	Method
GTTCACTGCCGAGTAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGAGTAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGAGTAGGCAGCTTAGAAA	CRT

29 spacers

cas1,cas3f,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NC_013592_9

>merge|NC_013592|9|3931312-3933079|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCGAGTAGGCAGCTTAGAAATCAACGACCGTCGGCGCTGTCAGTTGAGATAAGTTCACTGCCGAGTAGGCAGCTTAGAAAGCCACCTGCTGGGGCTGAATATTATGATGGACGTTCACTGCCGAGTAGGCAGCTTAGAAAATCCCGGCACTCGTCAGCGAGGAGTACATAGAGTTCACTGCCGAGTAGGCAGCTTAGAAATTTTCGTTGCCCAACCCTTCCACGAGGTGGAAGTTCACTGCCGAGTAGGCAGCTTAGAAAAGCTGCAACGGTTCCCGATGTCGTGCCGGTGCGTTCACTGCCGAGTAGGCAGCTTAGAAAGGCGATAAATGCGTCTTTAAATTCCTGCACGTGTTCACTGCCGAGTAGGCAGCTTAGAAAAGTATGCGGGGTTAAGACGCGTCGAGTTATGAGTTCACTGCCGAGTAGGCAGCTTAGAAATGGGGTGGATTAGTACGCTATCTGATCGACATGTTCACTGCCGAGTAGGCAGCTTAGAAAAGCCAGCGGGCCTTTGTTCGGGGCGCGCCAGTGTTCACTGCCGAGTAGGCAGCTTAGAAAGAACATTACGCCGGGCCGCACAGACCAAAATGGTTCACTGCCGAGTAGGCAGCTTAGAAACAGCTCAATGAAATGCTGGTTAAGCGCAACCAGTTCACTGCCGAGTAGGCAGCTTAGAAATTGCGTGCACTTGTATGCGAACGATTTTTCAAGTTCACTGCCGAGTAGGCAGCTTAGAAAAATAAGGCGTACCGCCTGCGCGTGCTTGATCGGTTCACTGCCGAGTAGGCAGCTTAGAAATTACGGCAGTTAATGAAACTCGGTCTACTTCTGTTCACTGCCGAGTAGGCAGCTTAGAAACTGGATTGTTGCGATTGTAGAAACGGGTGTATGTTCACTGCCGAGTAGGCAGCTTAGAAATTAGCCAAGATTACCCCCGAAAAGTGCAACTCGTTCACTGCCGAGTAGGCAGCTTAGAAAATGCATCACTACAGCTACGAAGAAATTATTGAGTTCACTGCCGAGTAGGCAGCTTAGAAAGCCCGGCTGGGCAGAACACCCCATGCGGTCAGGTTCACTGCCGAGTAGGCAGCTTAGAAAGACACACACCGGCATGTTGTTCATCGAGTCAAGTTCACTGCCGAGTAGGCAGCTTAGAAATATCCACATAACGGGATGGTCAATGCCGAGTTGTTCACTGCCGAGTAGGCAGCTTAGAAAATTGGCGCGCGACTTCGATTCTCAGATGTTTTGTTCACTGCCGAGTAGGCAGCTTAGAAAGTTGACCCAGCGACATGCCGCGCACGCGTTCGGTTCACTGCCGAGTAGGCAGCTTAGAAAGTTCACCGCTACGTTTTTCCGGCCAGAGATCAGTTCACTGCCGAGTAGGCAGCTTAGAAAGGCGCGCACGGTATGACCGGGCAATGCAGGCTGTTCACTGCCGAGTAGGCAGCTTAGAAAGCTATAACCTCAGCCAGATAAACAGACCCGATGTTCACTGCCGAGTAGGCAGCTTAGAAATTAATAGCGAGTTCTGACTAATAAGAATTGTCGTTCACTGCCGAGTAGGCAGCTTAGAAAGCTACGAAAACTGGTCCTGATCAAACTCGCAGGTTCACTGCCGCGTAGGCAGCTTAGAAACAGATGTCAGACTGGTCTTTCCCGACAGCCGGGTTCACTGCCGCGTAGGCAGCTTAGAAAGCATAGATAGACGGGCAGGCATCACGCATCGCGTTCACTGCCGAGTAGGCAGCTTAGAAA

>NC_013592|9|6|3931312-3933079|PILER-CR
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TCAACGACCGTCGGCGCTGTCAGTTGAGATAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCCACCTGCTGGGGCTGAATATTATGATGGAC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	ATCCCGGCACTCGTCAGCGAGGAGTACATAGA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTTTCGTTGCCCAACCCTTCCACGAGGTGGAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AGCTGCAACGGTTCCCGATGTCGTGCCGGTGC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GGCGATAAATGCGTCTTTAAATTCCTGCACGT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AGTATGCGGGGTTAAGACGCGTCGAGTTATGA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TGGGGTGGATTAGTACGCTATCTGATCGACAT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AGCCAGCGGGCCTTTGTTCGGGGCGCGCCAGT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GAACATTACGCCGGGCCGCACAGACCAAAATG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	CAGCTCAATGAAATGCTGGTTAAGCGCAACCA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTGCGTGCACTTGTATGCGAACGATTTTTCAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AATAAGGCGTACCGCCTGCGCGTGCTTGATCG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTACGGCAGTTAATGAAACTCGGTCTACTTCT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	CTGGATTGTTGCGATTGTAGAAACGGGTGTAT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTAGCCAAGATTACCCCCGAAAAGTGCAACTC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	ATGCATCACTACAGCTACGAAGAAATTATTGA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCCCGGCTGGGCAGAACACCCCATGCGGTCAG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GACACACACCGGCATGTTGTTCATCGAGTCAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TATCCACATAACGGGATGGTCAATGCCGAGTT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	ATTGGCGCGCGACTTCGATTCTCAGATGTTTT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GTTGACCCAGCGACATGCCGCGCACGCGTTCG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GTTCACCGCTACGTTTTTCCGGCCAGAGATCA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GGCGCGCACGGTATGACCGGGCAATGCAGGCT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCTATAACCTCAGCCAGATAAACAGACCCGAT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTAATAGCGAGTTCTGACTAATAAGAATTGTC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCTACGAAAACTGGTCCTGATCAAACTCGCAG
GTTCACTGCCGCGTAGGCAGCTTAGAAA	CAGATGTCAGACTGGTCTTTCCCGACAGCCGG
GTTCACTGCCGCGTAGGCAGCTTAGAAA	GCATAGATAGACGGGCAGGCATCACGCATCGC
GTTCACTGCCGAGTAGGCAGCTTAGAAA

>NC_013592|9|9|3931312-3933079|CRISPRCasFinder
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TCAACGACCGTCGGCGCTGTCAGTTGAGATAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCCACCTGCTGGGGCTGAATATTATGATGGAC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	ATCCCGGCACTCGTCAGCGAGGAGTACATAGA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTTTCGTTGCCCAACCCTTCCACGAGGTGGAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AGCTGCAACGGTTCCCGATGTCGTGCCGGTGC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GGCGATAAATGCGTCTTTAAATTCCTGCACGT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AGTATGCGGGGTTAAGACGCGTCGAGTTATGA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TGGGGTGGATTAGTACGCTATCTGATCGACAT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AGCCAGCGGGCCTTTGTTCGGGGCGCGCCAGT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GAACATTACGCCGGGCCGCACAGACCAAAATG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	CAGCTCAATGAAATGCTGGTTAAGCGCAACCA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTGCGTGCACTTGTATGCGAACGATTTTTCAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AATAAGGCGTACCGCCTGCGCGTGCTTGATCG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTACGGCAGTTAATGAAACTCGGTCTACTTCT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	CTGGATTGTTGCGATTGTAGAAACGGGTGTAT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTAGCCAAGATTACCCCCGAAAAGTGCAACTC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	ATGCATCACTACAGCTACGAAGAAATTATTGA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCCCGGCTGGGCAGAACACCCCATGCGGTCAG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GACACACACCGGCATGTTGTTCATCGAGTCAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TATCCACATAACGGGATGGTCAATGCCGAGTT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	ATTGGCGCGCGACTTCGATTCTCAGATGTTTT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GTTGACCCAGCGACATGCCGCGCACGCGTTCG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GTTCACCGCTACGTTTTTCCGGCCAGAGATCA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GGCGCGCACGGTATGACCGGGCAATGCAGGCT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCTATAACCTCAGCCAGATAAACAGACCCGAT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTAATAGCGAGTTCTGACTAATAAGAATTGTC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCTACGAAAACTGGTCCTGATCAAACTCGCAG
GTTCACTGCCGCGTAGGCAGCTTAGAAA	CAGATGTCAGACTGGTCTTTCCCGACAGCCGG
GTTCACTGCCGCGTAGGCAGCTTAGAAA	GCATAGATAGACGGGCAGGCATCACGCATCGC
GTTCACTGCCGAGTAGGCAGCTTAGAAA

>NC_013592|9|7|3931312-3933079|CRT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TCAACGACCGTCGGCGCTGTCAGTTGAGATAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCCACCTGCTGGGGCTGAATATTATGATGGAC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	ATCCCGGCACTCGTCAGCGAGGAGTACATAGA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTTTCGTTGCCCAACCCTTCCACGAGGTGGAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AGCTGCAACGGTTCCCGATGTCGTGCCGGTGC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GGCGATAAATGCGTCTTTAAATTCCTGCACGT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AGTATGCGGGGTTAAGACGCGTCGAGTTATGA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TGGGGTGGATTAGTACGCTATCTGATCGACAT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AGCCAGCGGGCCTTTGTTCGGGGCGCGCCAGT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GAACATTACGCCGGGCCGCACAGACCAAAATG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	CAGCTCAATGAAATGCTGGTTAAGCGCAACCA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTGCGTGCACTTGTATGCGAACGATTTTTCAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	AATAAGGCGTACCGCCTGCGCGTGCTTGATCG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTACGGCAGTTAATGAAACTCGGTCTACTTCT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	CTGGATTGTTGCGATTGTAGAAACGGGTGTAT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTAGCCAAGATTACCCCCGAAAAGTGCAACTC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	ATGCATCACTACAGCTACGAAGAAATTATTGA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCCCGGCTGGGCAGAACACCCCATGCGGTCAG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GACACACACCGGCATGTTGTTCATCGAGTCAA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TATCCACATAACGGGATGGTCAATGCCGAGTT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	ATTGGCGCGCGACTTCGATTCTCAGATGTTTT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GTTGACCCAGCGACATGCCGCGCACGCGTTCG
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GTTCACCGCTACGTTTTTCCGGCCAGAGATCA
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GGCGCGCACGGTATGACCGGGCAATGCAGGCT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCTATAACCTCAGCCAGATAAACAGACCCGAT
GTTCACTGCCGAGTAGGCAGCTTAGAAA	TTAATAGCGAGTTCTGACTAATAAGAATTGTC
GTTCACTGCCGAGTAGGCAGCTTAGAAA	GCTACGAAAACTGGTCCTGATCAAACTCGCAG
GTTCACTGCCGCGTAGGCAGCTTAGAAA	CAGATGTCAGACTGGTCTTTCCCGACAGCCGG
GTTCACTGCCGCGTAGGCAGCTTAGAAA	GCATAGATAGACGGGCAGGCATCACGCATCGC
GTTCACTGCCGAGTAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_013592.1\|WP_012886075.1\|3923005_3924013_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NC_013592.1\|WP_012886079.1\|3930012_3931014_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NC_013592.1\|WP_012886085.1\|3942355_3942574_+\|hypothetical-protein	unknown	unknown	unknown
NC_013592.1\|WP_012886088.1\|3946299_3946875_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|214900
NC_013592.1\|WP_012886074.1\|3922446_3923001_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NC_013592.1\|WP_012886087.1\|3945079_3945985_+\|hypothetical-protein	unknown	unknown	unknown
NC_013592.1\|WP_012886084.1\|3941717_3942266_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236362
NC_013592.1\|WP_012886086.1\|3943970_3945095_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370761
NC_013592.1\|WP_012886082.1\|3937810_3938230_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|376651
NC_013592.1\|WP_012886077.1\|3924977_3926315_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|187866
NC_013592.1\|WP_012886073.1\|3919610_3920804_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NC_013592.1\|WP_012886080.1\|3933506_3935177_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NC_013592.1\|WP_012886083.1\|3938652_3941484_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NC_013592.1\|WP_012886076.1\|3924024_3924981_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|378221
NC_013592.1\|WP_012886072.1\|3918955_3919570_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NC_013592.1\|WP_012886070.1\|3916483_3917857_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182324
NC_013592.1\|WP_012886089.1\|3946917_3947547_-\|NAD-dependent-dehydratase	unknown	unknown	gnl\|CDD\|187560
NC_013592.1\|WP_012886071.1\|3918228_3918705_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NC_013592.1\|WP_041164602.1\|3936137_3937748_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NC_013592.1\|WP_012886078.1\|3926719_3930016_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201

Protein	Function_ID	Function_description	E-value
NC_013592.1\|WP_012886075.1\|3923005_3924013_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NC_013592.1\|WP_012886079.1\|3930012_3931014_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NC_013592.1\|WP_012886088.1\|3946299_3946875_-\|flavin-reductase-family-protein	gnl\|CDD\|214900	smart00903, Flavin_Reduct, Flavin reductase like domain. This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology.	1.51558e-26
NC_013592.1\|WP_012886074.1\|3922446_3923001_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	2.39205e-96
NC_013592.1\|WP_012886084.1\|3941717_3942266_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|236362	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional.	3.6715e-106
NC_013592.1\|WP_012886086.1\|3943970_3945095_+\|hypothetical-protein	gnl\|CDD\|370761	pfam09952, AbiEi_2, Transcriptional regulator, AbiEi antitoxin, Type IV TA system. AbiEi_2 is the cognate antitoxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	0.000107169
NC_013592.1\|WP_012886082.1\|3937810_3938230_-\|YjbQ-family-protein	gnl\|CDD\|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	2.4271e-59
NC_013592.1\|WP_012886077.1\|3924977_3926315_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	2.3142e-177
NC_013592.1\|WP_012886073.1\|3919610_3920804_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NC_013592.1\|WP_012886080.1\|3933506_3935177_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	9.82204e-100
NC_013592.1\|WP_012886083.1\|3938652_3941484_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NC_013592.1\|WP_012886076.1\|3924024_3924981_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	8.92772e-147
NC_013592.1\|WP_012886072.1\|3918955_3919570_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	3.63366e-40
NC_013592.1\|WP_012886070.1\|3916483_3917857_-\|amino-acid-permease	gnl\|CDD\|182324	PRK10238, PRK10238, aromatic amino acid transporter AroP.	0
NC_013592.1\|WP_012886089.1\|3946917_3947547_-\|NAD-dependent-dehydratase	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	4.44726e-65
NC_013592.1\|WP_012886071.1\|3918228_3918705_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.89361e-34
NC_013592.1\|WP_041164602.1\|3936137_3937748_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.32728e-59
NC_013592.1\|WP_012886078.1\|3926719_3930016_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0

>NC_013592.1|WP_012886079.1|3930012_3931014_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MDNVFSPSDLKTILHSKRANIYYLQHCRILVNGGRVEYVTEEGNQSLYWNIPIANTSVVMLGTGTSVTQAAMREFARAGVMVGFCGGGGTPLFAANEAEVAVSWLSPQSEYRPTEYLQDWVSFWFNEEQRLAAAIAFQQVRIGQIRQHWLGGRLARESRFAIKPEHVEALLNRYQQGLTACRTSNDVLVQEAMMTKALYRLAANAVSYGDFTRAKRGGGTDLANRFLDHGNYLAYGLAAVALWVLGLPHGLAVLHGKTRRGGLVFDVADLIKDALILPQAFIAAMEGEDEQDFRQRCLTSFRQAEALDVMIDSLQQVAQQLSQVAKTGSQGAQ
>NC_013592.1|WP_012886078.1|3926719_3930016_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISECNKRALVETRRVLDQFAERKGERTWQTAITEEGLKTLRTLLRKTARRNTAVACHWIRSANHTELLWIVGNLRRFNPQGSVPTNRTERDILRSQDENPWHSAEAFSLLAAIAGLFHDIGKANALFQAGLRGKGPRSQPLRHEWVSLRLFQAFVGEQDDTGWLTALAAIRAEEEVALLARLQQDTKILKPSPFNSLPPLAQVVGWLIVSHHRLPMFWDDKSGNPSPDLSYIDEWLTTQVSPNWNAINHLRPDISAQEWQQVWQFPHGTPLQSRVWCEKARKFATRALKLPSLMTFGQLEQRLTVHLARLSLMLADHHYSSSDATPGWQDPRYTVWANTEKNVFKQRLDEHCVGVAQNALLLGRSLPHLRDTLPAITRHKGFRQRSTDARFRWQDKAFDQVCAIREQAARHGFFGVNMASTGRGKTLANARIMYALADESVGCRFSVALGLRTLTLQTGDALRQRLTLDEDDLAVLIGSQAVQELHELRQQEQETRVVQTGSESAESLFIEHQYVSYDGSLDDGRLKTWLKKSPTLHQLLSAPVLVTTIDHLMPATESLRGGHQIAPMLRLLTSDLVLDEPDDFGLEDLPALCRLVNWVGMLGSRVLLSSATLPPALIRALFEAYLKGREAWQQAYGEPGTPLSICCGWFDEFDSQCHQLADTDAFAAQHKAFVAGRIDKLQQQEQRLRWAEIEPVASPTREASAVCRAVAQTLHQRLFALHQHHHQTHSGGKTVSLGLIRMANINPLVAVARALMEMPSLPDYCVHYCVYHSQHPLAMRSHIEARLDAALMRKDPQALWQVAEIRDAIAQQPQRHHLFVVLATSVAEVGRDHDYDWAIAEPSSMRSFIQLAGRILRHRQRDEYVPTSPNFYLLSHNVRALRHGPAGDKQTIAFCRPGFESEHGFTLASHDLREILKPEDYQHISAAPRITEPPLDLKKLTLISLEHAALRLMLLGRTKPRPTDKPAAVLWWKVSLHWNGELQRHTPFRRSDPQQRYWLRLEDESEKTRFMLQDDGPSGWKEIDVIRSVEQAMADGVSLWVEMDYTTLYLQLAEEKQWELARVSDRFGEISISTRDNLAWCWHEWLGVFGALK
>NC_013592.1|WP_012886077.1|3924977_3926315_-|type-I-F-CRISPR-associated-protein-Csy1
MSSEGLQAFILSYIETRKQAKLDAFDKAADKQRAALSGEALAAAEVTLLQQRREIEQAYEVRTWLTDAASRAGQISLVTHALKFTHSDAKGSSVFSTEPATATDVLSTASLAQPAIDAVGNAAALDVAKLLQTEHQGDSLVAALQRGDHRALEALAENAEQLTQWLAGFGQVLSDKQPSSHKLAKQIYFPVGDGEYHLLSPLYSSSLSQALDQRLNAVRFGEQAKATREARRQKRWHDEVDVSYPGIAVQNMGGTKPQNISALNSARSGRSYLLNCAPPQWLSQIKPPLDSDTIFRNNGEVDALTYVDRRDMRQFLLSVKDVENNRDIRNQRRRYLDQLIDTLFGYVVTVQNLRPAGWSKDSRLNVPLQLWLDPFRCRQDDAFCYAREGGDWKEQVAREFGLWLNARLQHEKLIFGEVERREWSTAALFKQRLRENERWLKEELA
>NC_013592.1|WP_012886076.1|3924024_3924981_-|type-I-F-CRISPR-associated-protein-Csy2
MSKLMILRRIVVENANAIAGHTYGFPAISHFLGFTHALSRQLQASHGLRLEGCGVVCHQHQVHAYGNGWNRSFALTRNPLTKEEKTAAFNEEGRMHLTVSLLIECHGMLPGEDGREALRQQVRQQAQQQRLAGGLTVDIEQVSFHDIPARGAATRGLMRRLLPGFVLVDRTALLSSHLETRQQADAQADMLDAWLDFAALKYQAVRSSDDAVSWQPLPKPDRGYLVPLMTGYRAISPLYNPGEVEKTRDPSTPFCFAEAIYGVGEWRGAHRIDDINRIFWRYLYQHDDQHHTYRCLQTGQGTDSAADDYDEFELNDFE
>NC_013592.1|WP_012886075.1|3923005_3924013_-|type-I-F-CRISPR-associated-protein-Csy3
MAKAATTLKTASVLAFERKLANSDALMLAGNWQQENWQPVVIQEKSVRGTISNRLKNAISSDPAKLDAEIQKPNLQTVDVAALPFDADTLKVAFTLRVLGNLALPSVCNDQDYQQALTDLINGYAREQGFGVLAARYAENIASGRFLWRNRIGAEAVQVVVTHDDKRWEFNGEDYSLRQFSQPSGALAELAHAIEQALAGSDSAFFRVEAQVKLGNGQEVFPSQELVLDERARNGKSKILYQVNGVAAMHSQKIGNALRTVDDWHPEAAETGPIAVEPYGSVTSRGRAYRQPKDKMDFYTLLDNWVIKGNVPEVAQQHYVIATLIRGGVFGEKGE
>NC_013592.1|WP_012886074.1|3922446_3923001_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYIEIRVLPDPEFSAVQLLSALFAKLHRALGQRATGDIGVSFPDAGKTLGERLRLHGSVQALAALEQTGWLKGLRDYSTITDVLTVPTGAQYRTVRRVQVKSSAERLRRRAVSKGRMTADEAAARIPYAAEKRTSLPYLPLRSLSSGQTFLLFVEHGPLQEKPVAGVFSSYGLSAIATIPWF
>NC_013592.1|WP_012886073.1|3919610_3920804_+|aspartate/tyrosine/aromatic-aminotransferase
MFQNVDAYAGDPILSLMEKFKQDPRTDKVNLSIGLYYDGQGVIPQLQAVNAAETQLQAEPQHASVYLPMEGLAAYRSAVQTLLFGEHHPALTAQRVATIQTLGGSGALKVGADFLKRYFPDSEVWVSDPTWENHIAIFSGAGFQVHTYPYFDADTLGVNVEKMISALKQLPPRSIVLLHPCCHNPTGSDLTHAEWDRVIEVLIKGELVPFLDIAYQGFGGGMDDDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVVCEDQDAASRVLGQLKATVRRNYSSPPNFGAQVVSRVLNDSTLNASWHAEVEAMRLRIHEMRQTLVDELKKALPERNFDYLLTQRGMFSYTGFSAAQVDRLREEFGVYLIASGRVCIAGLNHHNVQRVAAAFAAVQ
>NC_013592.1|WP_012886072.1|3918955_3919570_+|YitT-family-protein
MDNVITPQPVSHTLLEDVLALLIGTLMVSFGVILLRQAGALTGGTAGMAFLLHYATHISFGTAFFLLNLPFYYLAIRRMGWAFTVKTFCAVAMVSLFSDLHPLFIHFDHLQPVYATLFGNLIMGLGFIVLFRHRASLGGVNILALYLQDKSGIRAGKFQMAVDVTIVLASLFVVSIPMLIASVVGAAALNLIIAMNHRPGRYIA
>NC_013592.1|WP_012886071.1|3918228_3918705_+|Lrp/AsnC-family-transcriptional-regulator
MYNIDDFDLKILTLLQANGRLTNQELSDLVGLSASQCSRRRIALEQAQLILGYHARLAPDAVGLELMGLIEVRLINHTQECVDSFHQMLGEVDAIIDAYKTTGDADYMLKVAVADLHGLSALISEILARNKSVAHLKTSVVLNRLKENGLMAPAASAL
>NC_013592.1|WP_012886070.1|3916483_3917857_-|amino-acid-permease
MNTQQDSQLKRGLKNRHIQLIALGGAVGTGLFLGIAQTIRMAGPSVLLGYAIAGVIAFFIMRQLGEMVVEEPVAGSFSHFANHYWGHFAGFMSGWNYWVLYVLVSMAELSAVGIYIQYWWPGVPTWVSAAVFFVAINAINLSTVKVYGELEFWFSIIKVAAIIGMIVFGGYLLLSGTGGPDASVANLWQHGGFFPNGVSGMVMAMAVIMFSFGGLELVGITAAEADDPQRSIPRATNQVIYRILLFYVGALAVLLSLYPWQKVVEGGSPFVLIFHALDSNLVANVLNLVVLSAALSVYNSCVYCNSRMLFGLAQQGNAPRVLLSVNRRGIPLVSLGVSALATALCVLLNYLMPGKAFELLMALVVSALVINWAMISITHLKFRQAKQRAHQETRFKSLGYPLTNILCLLFLAGILVIMAMTPGIQISVWLIPFWLLALGAGYAIKQRKKAVAVLTVE
>NC_013592.1|WP_012886080.1|3933506_3935177_-|HAMP-domain-containing-protein
MRLSDWRIGYRLGAGFAVLAVMLVFVGMLSMAKLSTFHDDARNIVQEIYPQTVDANALIENVNEGVRIFQQLLLVSGDDRIKAVSDQIAPVSKEITRLMDALEREANESNNAKIQQLIGDIRRIRAQFLESGQKMVALVKANNREEALDEFNQHLNPAQREYRNAVRQLVDYQDNAMMSTVDAMSASYHDIRLVLLTILGAGVLLSIWVAMAITRSVTQPIQQALLMADRVSQGDLTAQISTTRKDEAGLLLQALDHMNASLRQIVGQVRDGAEAISTAASQIAAGNQDLSSRTEEQASSLEQTAASVEELVSTIKNTADNTQQATSIANLASSAAHRSGEVMLSVTHKMRGIRESSMRMAEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKELIDDSVDKVQEGMDLVDNAESTLTDLTSHVNDVHSIINEISQASHEQSDGMSQINIAVGQIDTTTQQNAALVEESASAALSLQSQASLLAEAVSAFRLTTQGNSGATSPARPSAVLSPALPEKRAAAAAGSHSDWTSF
>NC_013592.1|WP_041164602.1|3936137_3937748_+|GGDEF-domain-containing-protein
MRVKNLLRINLLHLILFISLASMFITLLNSYFTFYHVQKKLLIEQANKVNSSYSSKLSTTVDNFFSISEEQLSYGARLLVTHIQSGNLHTLQTELQRIHRLSHVFNSMLVVTENGQIIASSPTSLNLTGLTLHSRQHIAANKGKRFFISSPYTSLSGNYIIFISQPILDDAGNYLGYVGGSLYLNNRRVLNEFMNTQFSNDSFNTYVIDKEGTIIYHHDIAQVGTKFTDPTLFSVISNQDKGSFMMPDEQGIPSPASFIRTQKSGWIIITQQSFHSIEEALNNVMLDVLKQGTPLGIATLMILSILVYYIAKPLRQLAKSASSMEQPGVIGKIRAVKAWYQEIEQLKRVLLMGTVLLHKRIGRLSSEAHTDPLSGMLNRRGMLESMEEIRGEYKKVSVIAIDIDHFKSINDSFGHDVGDMVIRKLSQQIRKNFRKTDLVCRIGGEEFLILLPGADIHVATVIAERLRNNVANTVYVPGSQHHQVTISIGVTTFNPQKSALDIAIKTADNALYKAKNGGRNQVVVEYLSDDISLAQH
>NC_013592.1|WP_012886082.1|3937810_3938230_-|YjbQ-family-protein
MWKQYDIRLKPRSRGFHLITDEVLGQVTDLRQVKVGLLHVFICHTSASLTVNENADPTVRQDFENFFNQLVPEDEPYYRHTYEGSDDMPAHLKSSLLGSSLMLPVRNGRLHVGTWQGIYLCEHRNHGGSRSLVVTLQGE
>NC_013592.1|WP_012886083.1|3938652_3941484_-|excinuclease-ABC-subunit-UvrA
MDKIEIRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPEHDIPLDAQTVSQMVDNALSQPEGKRLMLLAPIVKERKGEHTKTLENLATQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRSDLAQRLAESFETALELSGGTAVVADMDDPNAPELLFSANFACPVCGYSMHELEPRLFSFNNPAGACPTCDGLGVQQFFDPARVVQNGELSLAGGAIRGWDRRNFYYFQMLRSLAEHYEFDVEAPFDSLSPAIQKVILYGSGKENIEFKYINDRGDTSVRRHPFEGVLNNMERRYKETESTAVREELAKFISNRPCASCNGTRLREEARHVYVEQTTLPQIADMSIGHAMEFFHNIKLSGQRAKIAEKVLKEIGDRLRFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNTVIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAEGTATQIMAVPESLTGQYLSGARKIEIPAQRVQADPSKVLKLIGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGGELNEPAPYREIQGLEQFDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAGVPEARSRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKSIHEVLEMTIEDAREFFDAIPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAQCEQSHTARFLKPILDRG
>NC_013592.1|WP_012886084.1|3941717_3942266_+|single-stranded-DNA-binding-protein
MASRGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTEWHRVALYGKLAEIAGEYLRKGSQVYIEGQLRTRKWQDQGGQDRYTTEVVVDISGSMQMLGGRTGGGAPAGGNMGGNTGGGNAPQGGWGQPQQPQQANQFSGGGQSRPQQSAPMPGNEPPMDFDDDIPF
>NC_013592.1|WP_012886085.1|3942355_3942574_+|hypothetical-protein
MRILPMSRSFELQRISEAHRQAMLQSVERASSRASAAGAAGAAGAAETVRALSPSDLNELIHQAMSQVLGSK
>NC_013592.1|WP_012886086.1|3943970_3945095_+|hypothetical-protein
MGHYSHSLGFEFERQMLDALVEALAEAFGSEASVLDASHELRGVGVELDGMIVIKAPGKTLQVFVEVKREVYPRDLRNAVYQLHRGIDETRHRHEAIIGLLAAGVLSPGAKQELREQNIASFELGGSLYLKHDGWLINIEKPSHRTKKNTQGIDLFTEARESVIHALLMNSHGWLTGTELAEQAETSPYTCSLVLQELTLREWVESTGGGPSKRRMLTRPGKLLDAWSEQWQERKEKKSKWYTFVENPKDMLSHLAERIDRQKVDYPWAFTGAAAANVYAPLLTSTEGAEIIVPKGYAERMADVLGLKPVSKGANVTLIEREPASLLYRDMHSDHPIFFASPYILYLDLLDGRGRNKELAEHIRERLESLWQQD
>NC_013592.1|WP_012886087.1|3945079_3945985_+|hypothetical-protein
MATGLKPRTAAGYDQDVTSACERTLLTLLSAFGNLKDTLRLVGGLVPRYLTPATPPDVPMHAGTSDVDIVLNLEVLAAGNEYASLAQQLKARGFTRWSEEGKSASWRWRRKVNDHIEVVVELLRDAGDEEPGRTISVDGEKVSALTIKHARIVHDWYQQKEISAQLLDGDGLSVDIVRFADVPAFVVLKALALDQRQERKDAADLIHVIRYSGSVQEVAALFVQRIRSGQHPEALQDGLVALSRRFGDDEHGEGYEKVGPVAYARFHGKDNEDEDELVGRQRFAAGLVQHLLAEIEKQRAI
>NC_013592.1|WP_012886088.1|3946299_3946875_-|flavin-reductase-family-protein
MNSEISPVELAKAYRLVNHGPTVLVSACHNGVEDVMAAAWCCGLDFVPPKLTVVLDKATKTRELLENSGYFAVQVPTVAQLQLTNQVGNISLRDNPDKLAHCQVELFRTSESDVPLVAGCAAWLLCKLIPEAHNQQTYDLFIGEVIAAWADSRVFSDGHWHFEKADPAWRSLHHVAGGHYYAIGDALCAGE
>NC_013592.1|WP_012886089.1|3946917_3947547_-|NAD-dependent-dehydratase
MKLLLVGATGLVGHQVLLKALAESRITQVTAPVRRELPAHDKLLVPQVSFEHLPPDADWWQADAVICTLGSTIKTAGSQAAFYRVDHDYPLAVARLAKHHGTPTYVLNSARGASVTSRFFYDRVKGDVERDLAGVGFSSLTLVRPGLIGGERHDRRAGEWAAQQVLRVLHPVLPRALRINPAENIADALLAAALNPVGGVQVIGSEHLV

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Crispr_ID: NC_013592_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013592_10

4395317-4395431

Orphan

Consensus_repeat	Method
AAAAATTTCCGGGAGAAATGTTGATATCGCAACGCGATAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013592_10

>merge|NC_013592|10|4395317-4395431|CRISPRCasFinder
AAAAATTTCCGGGAGAAATGTTGATATCGCAACGCGATAGCCCGTAGGGTGGCGGCCAGGGATGGTAAGCCACCAAAAATTTCCGGGAGAAATGTTGATATCGCAACGCGATAGC

>NC_013592|10|10|4395317-4395431|CRISPRCasFinder
AAAAATTTCCGGGAGAAATGTTGATATCGCAACGCGATAGC	CCGTAGGGTGGCGGCCAGGGATGGTAAGCCACC
AAAAATTTCCGGGAGAAATGTTGATATCGCAACGCGATAGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_013592.1\|WP_012886463.1\|4406246_4408091_-\|ATP-dependent-DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|182933
NC_013592.1\|WP_012886449.1\|4391767_4391911_+\|hypothetical-protein	unknown	unknown	unknown
NC_013592.1\|WP_012886454.1\|4395906_4397109_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NC_013592.1\|WP_012768004.1\|4387157_4387370_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NC_013592.1\|WP_012886457.1\|4400289_4401639_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NC_013592.1\|WP_012886453.1\|4394538_4395237_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NC_013592.1\|WP_012886445.1\|4387731_4388151_-\|nickel-responsive-transcriptional-regulator-NikR	unknown	unknown	gnl\|CDD\|235093
NC_013592.1\|WP_012886447.1\|4389693_4390287_+\|YhgN-family-NAAT-transporter	unknown	unknown	gnl\|CDD\|170674
NC_013592.1\|WP_012886452.1\|4394041_4394473_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226809
NC_013592.1\|WP_012886461.1\|4404826_4405447_+\|homoserine/homoserine-lactone-efflux-protein	unknown	unknown	gnl\|CDD\|182514
NC_013592.1\|WP_012886451.1\|4392545_4393544_-\|gluconate-operon-transcriptional-repressor-GntR	unknown	unknown	gnl\|CDD\|184949
NC_013592.1\|WP_012886446.1\|4388393_4389494_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|235839
NC_013592.1\|WP_012886450.1\|4392018_4392537_+\|gluconokinase	unknown	unknown	gnl\|CDD\|225804
NC_013592.1\|WP_012886448.1\|4390394_4391711_-\|gluconate-transporter	unknown	unknown	gnl\|CDD\|237880
NC_013592.1\|WP_012886459.1\|4402859_4403669_-\|sugar/pyridoxal-phosphate-phosphatase-YigL	unknown	unknown	gnl\|CDD\|182878
NC_013592.1\|WP_012886455.1\|4397105_4398356_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|235412
NC_013592.1\|WP_012886460.1\|4403721_4404714_-\|lysophospholipase-L2	unknown	unknown	gnl\|CDD\|182697
NC_013592.1\|WP_012886458.1\|4401792_4402881_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NC_013592.1\|WP_012886456.1\|4398345_4399989_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NC_013592.1\|WP_012886462.1\|4405504_4406131_-\|threonine-export-protein-RhtC	unknown	unknown	gnl\|CDD\|236665

Protein	Function_ID	Function_description	E-value
NC_013592.1\|WP_012886463.1\|4406246_4408091_-\|ATP-dependent-DNA-helicase-RecQ	gnl\|CDD\|182933	PRK11057, PRK11057, ATP-dependent DNA helicase RecQ; Provisional.	0
NC_013592.1\|WP_012886446.1\|4388393_4389494_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|235839	PRK06598, PRK06598, aspartate-semialdehyde dehydrogenase; Reviewed.	0
NC_013592.1\|WP_012886454.1\|4395906_4397109_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NC_013592.1\|WP_012768004.1\|4387157_4387370_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	2.92598e-35
NC_013592.1\|WP_012886457.1\|4400289_4401639_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NC_013592.1\|WP_012886453.1\|4394538_4395237_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	4.68155e-81
NC_013592.1\|WP_012886445.1\|4387731_4388151_-\|nickel-responsive-transcriptional-regulator-NikR	gnl\|CDD\|235093	PRK02967, PRK02967, nickel-responsive transcriptional regulator NikR.	4.50702e-58
NC_013592.1\|WP_012886447.1\|4389693_4390287_+\|YhgN-family-NAAT-transporter	gnl\|CDD\|170674	PRK10739, PRK10739, YhgN family NAAT transporter.	1.94356e-107
NC_013592.1\|WP_012886452.1\|4394041_4394473_+\|hypothetical-protein	gnl\|CDD\|226809	COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown].	0.00204408
NC_013592.1\|WP_012886461.1\|4404826_4405447_+\|homoserine/homoserine-lactone-efflux-protein	gnl\|CDD\|182514	PRK10520, rhtB, homoserine/homoserine lactone efflux protein; Provisional.	3.30577e-131
NC_013592.1\|WP_012886451.1\|4392545_4393544_-\|gluconate-operon-transcriptional-repressor-GntR	gnl\|CDD\|184949	PRK14987, PRK14987, HTH-type transcriptional regulator GntR.	1.59828e-180
NC_013592.1\|WP_012886456.1\|4398345_4399989_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NC_013592.1\|WP_012886450.1\|4392018_4392537_+\|gluconokinase	gnl\|CDD\|225804	COG3265, GntK, Gluconate kinase [Carbohydrate transport and metabolism].	1.13303e-90
NC_013592.1\|WP_012886448.1\|4390394_4391711_-\|gluconate-transporter	gnl\|CDD\|237880	PRK14984, PRK14984, gluconate transporter.	0
NC_013592.1\|WP_012886459.1\|4402859_4403669_-\|sugar/pyridoxal-phosphate-phosphatase-YigL	gnl\|CDD\|182878	PRK10976, PRK10976, putative hydrolase; Provisional.	0
NC_013592.1\|WP_012886455.1\|4397105_4398356_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|235412	PRK05329, PRK05329, glycerol-3-phosphate dehydrogenase subunit GlpB.	0
NC_013592.1\|WP_012886460.1\|4403721_4404714_-\|lysophospholipase-L2	gnl\|CDD\|182697	PRK10749, PRK10749, lysophospholipase L2; Provisional.	0
NC_013592.1\|WP_012886458.1\|4401792_4402881_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NC_013592.1\|WP_012886462.1\|4405504_4406131_-\|threonine-export-protein-RhtC	gnl\|CDD\|236665	PRK10229, PRK10229, threonine efflux system; Provisional.	2.20647e-131

>NC_013592.1|WP_012886453.1|4394538_4395237_-|pirin-family-protein
MIYLRKAHDRGHANHGWLDSWHTFSFADYYDPDFMGFSALRVINEDYIEGGQGFGTHPHRDMEILTYVLEGTVEHQDSMGNKEQIPAGEFQIMSAGTGIRHSEYNASQDKLLHLYQIWVIPEKTGLTPRYEQRRFDAPQGRQLVLSPDARDGSLKVFQDMTLWRWALKAQEASSYQTQQGRVLWIQVVRGSVEVNGQQATISDALAIWDEDAITVRASEDSEILLFDLPPAK
>NC_013592.1|WP_012886452.1|4394041_4394473_+|hypothetical-protein
MTSISQTGAYAATPSIVISNPKITITKSEETGGYHVNIDSKPGSTNNQQPSEEALRKMMDYFDAKKAGIEPPQSSHVTISDGTPITLVTYGDLLKKATSTDNPVTTTAGRAVYTPGTSSEGITIQSAPVTTSSEAETPTTQPS
>NC_013592.1|WP_012886451.1|4392545_4393544_-|gluconate-operon-transcriptional-repressor-GntR
MIKKKRPVLQDVADRVGVTKMTVSRYLRNPEQVSEALRGKIAAVLDELGYIPNRTPHILANSTSRAIGVLLPSLTNQVFAEVLRGIEKVAESQGYQTMLAHYGYQPEVEERRLMSLLAYNIDGLILAERNHTARTRQMIAVAGIPVVELMDSVSPCLDMAVGFDNVDAARQMTRYMIARGRRRVVYLGARQDERTLLKQRGYEQAMAEAGLASYSVMSESPSSYTLGGELLRRAQAEYPQLDSLFCTNDDLAIGAMFECQRQGLRVPEQMGIAGFHGHDIGQTTVPRLTSILTPRKRIGEIGAAQLLARLHGETLPTPRVDVGFTVQVGESV
>NC_013592.1|WP_012886450.1|4392018_4392537_+|gluconokinase
MSGQSIILMGVSGSGKSSVGAQLARDIHAKFIDGDDLHPRANIQKMASGQPLNDDDRAPWLERLNDAAYSLLHKNETGIIVCSALKRRYRDRLRDGNDGMVFLYLKGSFDVILQRHQARAGHFMPTGLLQSQFDALEEPDETEADVITVDINGPMDQVVARCIEALRARLPR
>NC_013592.1|WP_012886449.1|4391767_4391911_+|hypothetical-protein
MFCEGSRCDIDAFATVVAYLRRDRHASLHAVGNAFTQCDGCHVATIA
>NC_013592.1|WP_012886448.1|4390394_4391711_-|gluconate-transporter
MPLVIVAVGVALLLVLMIRFKLNGFIALILVALAVGVMQGMPVQKVMTSIKNGVGGTLGSLALIMGFGAMLGKLLADCGGAQRIASTLIHRFGRKHIQWAIVLTGFTVGFALFYEVGFVLLLPLVFSIVASARIPLLYAGVPMAAALSVTHGFLPPHPGPTAIASLFHADMGKTLLYGTLLGIPTVILAGPVYARFLKKIDKPIPEGLYNPKQFTEEEMPGFAVSVMTALVPVILMALRAVAEMILPKGHALLSYAEFFGDPVMATLIAVLIAIFTFGLNRGRSMDEVMGTITDSIKIIAMMLLILGGGGAFKQVLVDSGVDKYIASMMHGSSVSPLLLGWLIAAVLRLALGSATVAALTAGGIVAPIIATSGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLSIPETLKSWSALETIIAVCGLVGTLLLSYVV
>NC_013592.1|WP_012886447.1|4389693_4390287_+|YhgN-family-NAAT-transporter
MTEMISATVLLLLIMDPLGNLPVFMSVLKHLDPKRRRVVLIREMIIALGVMLVFLFAGEKILAILNLRTETVSISGGIVLFLIAIRMIFPTQEGFTSGLPAGDEPFLVPLAIPMVAGPSILAALMLLSHQYPDQLPHLTLALLIAWAITVVVLLLSNLFLRLLGDKGVNALERLMGLVLVMLSTQMFLDGIRAYLKL
>NC_013592.1|WP_012886446.1|4388393_4389494_-|aspartate-semialdehyde-dehydrogenase
MKNVGFVGWRGMVGSVLMQRMVEERDFDLIRPVFFSTSQHGQPAPALGGQQGVLQDAYNLDALRALDIIITCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNHGVIQSGLDKGIKTFVGGNCTVSLMLMSLGGLFANDLVEWASVATYQAASGAGARNMRELLIQMGQLNAEVAAELSDPASAILDIERKVTALSRGGLDVENFGVPLAGSLIPWIDKQLENGQSREEWKGQAETNKILNTASTIPVDGLCVRIGALRCHSQAFTLKLKKDVSIPEIEQMLATHNDWVKVVPNDREITMRELTPAAVTGTLSTPVGRLRKLNMGPQYLSAFTVGDQLLWGAAEPLRRMLRILL
>NC_013592.1|WP_012886445.1|4387731_4388151_-|nickel-responsive-transcriptional-regulator-NikR
MQRLTISLDDLLAEALDALMLRKGYANRSEAFRDMLRRELGEMTVAQDKNAECVAVLSYVYDHHERQLSSRLAGMQHEHHHLTVSTMHTHLSHDECVETVILRGPTERVEQFAASVIAQTGVRHGQLNLIPMEQAATKE
>NC_013592.1|WP_012768004.1|4387157_4387370_-|cold-shock-protein
MSNKMTGSVKWFNESKGFGFISPADGSKDVFVHFSAIQSDSFKTLYEGQKVEFVIGNGPKGPSAENVVGL
>NC_013592.1|WP_012886454.1|4395906_4397109_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MMSRSDTSFENCIKCTVCTTACPVARVNPFYPGPKQAGPDGERLRRKDPALFDEALKYCTNCKRCEVACPSDVKIGDIIQRAKASHSQHRPTLRDAILSHTDLMGSVATPFAPLVNTLTGLKPMRQLLDKALKIDHRRQLPRYSHGTFRSWYRRQAAQQLQFADQVAYFHGCYVNYNHPQLGRDLIRVFNAMGVGVQLLTKEKCCGVALIANRFLDKARKQANFNLASLDEAINSRGLPVIATSSSCTFTLRDEYPHLLGVDNHHVRDGIELATRHLYRLLDQGRTLPLQPLPLRVVYHTPCHLERMGWTAYTLELLRRIPGLELQVLDSQCCGIAGTYGFKKENYDTAQGIGAPLFRQIEASGADLVITDCETCKWQIEMSTSKACEHPFSLLARALPA
>NC_013592.1|WP_012886455.1|4397105_4398356_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MHYDVVIIGGGLAGLTCGIRLQEQGKRCAVVSVGQSALTFASGALDLLATLPDGTAVEQPLTALDELAAQAPYHPYTLMGKARVSQLAADAEALLSRCGLWLRGDSGGNHQRLTPLGKWHPCWLSPSDSVTRGLSGSPAWRQPLVAGIEGFMDFQSRLVAGELQAQGIAARADDLRLPLLDAQRQNASEFRSLAIARVLDTPAGIAALAEELMTRASGNDAVILPACLGLDAQAQLNAALGKPVGLLATLPPSLPGMRLHQALLGRFRQTGGTLMPGDKVLSAQARDTGVALYTRSHGEVPLRAEHVVLASGSFFSNGLVAERDRVVEPVFGLDVDFLPTHEDWSQSNLFAAQPYLQFGVIADEQLHPAIDGHTQHRLYAIGSVLRGYDPLRQGCGGGVSLLSALYAAEMITRENR
>NC_013592.1|WP_012886456.1|4398345_4399989_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MANNGLRRETDVVIIGGGATGAGTARDCALRGLRCLLLERHDIATGATGRNHGLLHSGARYAVTDAESARECIEENQILRRVARHCIEPTDGLFLTLPQDDIDYQTRFIAACQRAGIRAQAIDPQEALRLEPAANPALIGAVRVPDGTVDPFRLTAANMIDACEHGAEVLTYHEVIGLLRQGDRVVGVRVFDHKRQVASEIYAQVVVNAGGIWGQRIAEYADLNVRMFPAKGALLILGHRINNRVINRCRPPADADILVPGDTISLIGTTSTRIDYDQIDHMTVTPEEVDTLIREGSMLAPQLAQTRILRAYAGVRPLVASDNDPSGRSVSRGIVLLDHASRDGLEGFVTITGGKLMTYRLMAEWVTNKVCEKLGHRAECTTASRPLPGSETTEPDRPQATSSLSAPLRGSAIYRHGHRAAPLVSGHRVDSSLVCECEAVTAGEVRYAVESLQVNNLTDLRRRTRVGMGTCQGELCACRAAGLLCRLGQSTPQQAVSQLSQFLNERWKGMRPIAWGNTLRESEFTSWIYQGLCGLTERPEQENGDAL
>NC_013592.1|WP_012886457.1|4400289_4401639_+|glycerol-3-phosphate-transporter
MLSIFKPAAHRPRVAEHQVDPLYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSKGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAVVMLFMGFVPWATSSIMVMFVLLFVCGWFQGMGWPPCGRTMVHWWSQKERGGIVSIWNCAHNVGGGIPPLLFLLGMAWFNDWKAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPVDYSEKDEQELTAKEIFMQYVFPNKLLWYIAFANVFVYLLRYGILDWSPTYLKEVKHFALDKSSIAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIATVVYWLNPAGNPNVDMLCMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWNGGFMVMIGGSVLAVLLLVLTMINETKHKAELAKRA
>NC_013592.1|WP_012886458.1|4401792_4402881_+|glycerophosphodiester-phosphodiesterase
MIPLFKPLLAGVALAISLGALAQTDDKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDNALVVLHDHYLDRVTDVASRFPNRARADGRYYAIDFTLAEIRSLKFTEGFDLKDGKPVQSYPNRFPMGKSDFRVHTFQDEIEFIQGLNHSTGKNIGIYPEIKAPWFHRQEGKDISRAVLEVLKQYGYTQKSDRVYLQCFDANELQRIKTELEPALGMNLKLVQLIAETRWQETQQRQPDGRWVNYDYDWMLKPGAMQKIARYADGVGPDYHMLLSGDTGKVTISPLVKEAHASGMVVHPYTVRADRLPKYASDVNALYALLYRQADVDGLFTDFPDKAVAFLHNAQPVSQAPSPR
>NC_013592.1|WP_012886459.1|4402859_4403669_-|sugar/pyridoxal-phosphate-phosphatase-YigL
MYPIVASDLDGTLLSSDHTLSPYAKETLRLMTEQGIHFVFATGRHHMDVAQLRDNLAISAYMITSNGARVHNTDGELIFSHNLDRDIAQELYGMVYHHPEIMTHVYRDNEWFLCRSRPEEERFFTETVFRYKLFDPDTLGTDGVGKVFFTCEDHDKLLPLEEALNARWGDRVNVSFSTLSCLEVMAGGVSKGHALEQVAKILGHTIKDCIAFGDGMNDYEMLSMAGKGCIMNNAHQRLKDMLPDNEVIGTNIEQAVPRYLRRLYLGDGA
>NC_013592.1|WP_012886460.1|4403721_4404714_-|lysophospholipase-L2
MNPYPECLLTREWQYAAFVTGPLLDFWRQRQEGMFIGVDDVPVRFVRFTSSLHRHLVVVLPGRTDSYVKYAEVAYDLFQCGYDVLMMDHRGQGRSGRLLKDGHRGHVNRFSDYVDDVATLWQQQVAPGQYTRRFALAHSMGGAILAQFLARQPQAFDAAALCAPMCGILLPMPRWLAWRILAWAERRPRIRDYYAIGTRPWRPLPFMANELTHSRERYRRHVRFYADDPDLRIGGPTYHWVREALRVEEQLLQQAPTITTPLLLLQAQEEQVVDNRSQDAFCQALAAAGHPCVGGRPYVVRGARHDILSEKDAMRADAFGQILQHFSDYH
>NC_013592.1|WP_012886461.1|4404826_4405447_+|homoserine/homoserine-lactone-efflux-protein
MTQDWWLTYLLTTLILSLSPGSGAINTMSTSISHGYRGAVASIAGLQLGLTIHIVLVGIGLGALLSQSVLAFDALKWLGAAYLIWLGIQQWRSAGSLDLQTLANSMPRRRLFKRAILVNLTNPKSIVFLAALFPQFIIPHQPQAMQYLVLGVTTVVVDVIVMIGYATLARRIALWLKGPRQLKQLNRTFGSLFILVGALLATARKA
>NC_013592.1|WP_012886462.1|4405504_4406131_-|threonine-export-protein-RhtC
MLMLFLTVALVHLIALMSPGPDFFFVSQTAISRSRREALMGVLGITLGVLVWAAIALLGLHLLLERMAWLHRIVTVGGGLYLCWMGWQLLRSALRQRAHQDEGAAVEVALPQRGKTFMRGLLTNLSNPKALIYFGSVFSLFVGDDVGAAARWGLFTLISLETLLWFSVVALVFALPVMRRGYQRLAKWVDGLAGALFTGFGIHLIISR
>NC_013592.1|WP_012886463.1|4406246_4408091_-|ATP-dependent-DNA-helicase-RecQ
MSTADVLNADVLSKEMLAMQVLRETFGYQQFRPGQQDIINAAINGRDCLVIMPTGGGKSLCYQIPALVLDGLTLVVSPLISLMKDQVDQLQAYGVAAACLNSTQSREQQQAVFNACRRGELKLLYIAPERLSTDGFLDQLVHWNTSLIAIDEAHCISQWGHDFRPEYRALGQIKQQCPTLPIVALTATADDTTRQDIARLLDLRDPLVNVSSFDRPNIRYTLVEKFKPLDQLWLFIHGQRGKSGIVYCNSRAKVEDLCARLQNRGLSVGAYHAGLDNDRRSQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCLEEKPAGMQLDIERHKLNAMGAFAEAQTCRRLVLLNYFGENRQQSCGNCDICLDPPRRYDGLVDAQKALSCVYRVGQRFGIGYIAEVLRGANNQRIREFGHDKLPVYGLGKDKTQEQWVSILRQLIHLGLLAQNIAHHSALQLTESARPVLRGEVPLQLAVPRVSSLSKPRASQKSYGGNYDRKLFAKLRKLRKSIADEDNIPPYVVFSDATLLEMAELLPLTASELLAVNGVGQRKLERFGVPFMTLIRDHLDSGDD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_013592_2	2.10\|406609\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406609-406640	32	NZ_CP047287	Proteus cibarius strain G11 plasmid p52, complete sequence	10957-10988	4	0.875
NC_013592_2	2.10\|406609\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406609-406640	32	NZ_CP053373	Proteus cibarius strain G32 plasmid pG32-51, complete sequence	7246-7277	4	0.875
NC_013592_2	2.10\|406609\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406609-406640	32	NZ_CP047341	Proteus cibarius strain ZF1 plasmid pZF1-cfr, complete sequence	25905-25936	4	0.875
NC_013592_2	2.10\|406609\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406609-406640	32	NZ_CP045009	Proteus cibarius strain ZF2 plasmid pZF2-cfr, complete sequence	43235-43266	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719709	Rheinheimera phage vB_RspM_Barba5A, complete genome	37310-37341	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719748	Rheinheimera phage vB_RspM_Barba29S, complete genome	38464-38495	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497264	Rheinheimera phage vB_RspM_barba12-8G, complete genome	70441-70472	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719716	Rheinheimera phage vB_RspM_Barba10A, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497235	Rheinheimera phage vB_RspM_barba10-9H, complete genome	19548-19579	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497268	Rheinheimera phage vB_RspM_barba12-9B, complete genome	52949-52980	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497226	Rheinheimera phage vB_RspM_barba10-8B, complete genome	39521-39552	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719713	Rheinheimera phage vB_RspM_Barba8A, complete genome	37310-37341	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497239	Rheinheimera phage vB_RspM_barba12-6A, complete genome	37588-37619	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497232	Rheinheimera phage vB_RspM_barba10-9E, complete genome	33867-33898	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719753	Rheinheimera phage vB_RspM_Barba34A, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497261	Rheinheimera phage vB_RspM_barba12-8C, complete genome	47404-47435	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497273	Rheinheimera phage vB_RspM_barba12-9G, complete genome	10175-10206	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719746	Rheinheimera phage vB_RspM_Barba28S, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497255	Rheinheimera phage vB_RspM_barba12-7G, complete genome	11266-11297	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719734	Rheinheimera phage vB_RspM_Barba21S, complete genome	37859-37890	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497254	Rheinheimera phage vB_RspM_barba12-7F, complete genome	11566-11597	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497238	Rheinheimera phage vB_RspM_barba11-8A, complete genome	11266-11297	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719744	Rheinheimera phage vB_RspM_Barba27S, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719717	Rheinheimera phage vB_RspM_Barba10S, complete genome	37543-37574	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497256	Rheinheimera phage vB_RspM_barba12-7H, complete genome	75788-75819	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719732	Rheinheimera phage vB_RspM_Barba20S, complete genome	38509-38540	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497247	Rheinheimera phage vB_RspM_barba12-6I, complete genome	11073-11104	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497263	Rheinheimera phage vB_RspM_barba12-8F, complete genome	11266-11297	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497242	Rheinheimera phage vB_RspM_barba12-6D, complete genome	27610-27641	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497246	Rheinheimera phage vB_RspM_barba12-6H, complete genome	33805-33836	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719711	Rheinheimera phage vB_RspM_Barba6A, complete genome	37406-37437	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497260	Rheinheimera phage vB_RspM_barba12-8B, complete genome	31467-31498	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497278	Rheinheimera phage vB_RspM_barba13-8A, complete genome	38241-38272	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497250	Rheinheimera phage vB_RspM_barba12-7B, complete genome	9694-9725	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719750	Rheinheimera phage vB_RspM_Barba31A, complete genome	42200-42231	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719727	Rheinheimera phage vB_RspM_Barba17A, complete genome	37416-37447	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719743	Rheinheimera phage vB_RspM_Barba26S, complete genome	37416-37447	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719724	Rheinheimera phage vB_RspM_Barba15A, complete genome	38554-38585	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497276	Rheinheimera phage vB_RspM_barba13-4A, complete genome	74840-74871	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497234	Rheinheimera phage vB_RspM_barba10-9G, complete genome	11272-11303	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719708	Rheinheimera phage vB_RspM_Barba4S, complete genome	37474-37505	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497249	Rheinheimera phage vB_RspM_barba12-7A, complete genome	11266-11297	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	NC_048191	Rheinheimera phage vB_RspM_Barba21A, complete genome	37482-37513	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497269	Rheinheimera phage vB_RspM_barba12-9C, complete genome	40370-40401	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497272	Rheinheimera phage vB_RspM_barba12-9F, complete genome	5703-5734	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497248	Rheinheimera phage vB_RspM_barba12-6J, complete genome	11266-11297	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497225	Rheinheimera phage vB_RspM_barba10-8A, complete genome	60962-60993	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719725	Rheinheimera phage vB_RspM_Barba15S, complete genome	37377-37408	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719712	Rheinheimera phage vB_RspM_Barba7A, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497274	Rheinheimera phage vB_RspM_barba12-9I, complete genome	74840-74871	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497228	Rheinheimera phage vB_RspM_barba10-9A, complete genome	11443-11474	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497271	Rheinheimera phage vB_RspM_barba12-9E, complete genome	11372-11403	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719704	Rheinheimera phage vB_RspM_Barba2S, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497244	Rheinheimera phage vB_RspM_barba12-6F, complete genome	49098-49129	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719705	Rheinheimera phage vB_RspM_Barba3A, complete genome	38078-38109	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719706	Rheinheimera phage vB_RspM_Barba3S, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	NC_048188	Rheinheimera phage vB_RspM_Barba8S, complete genome	38613-38644	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719735	Rheinheimera phage vB_RspM_Barba22A, complete genome	37416-37447	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719751	Rheinheimera phage vB_RspM_Barba32A, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	NC_048189	Rheinheimera phage vB_RspM_Barba18A, complete genome	37416-37447	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719707	Rheinheimera phage vB_RspM_Barba4A, complete genome	37401-37432	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497277	Rheinheimera phage vB_RspM_barba13-6A, complete genome	52943-52974	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719721	Rheinheimera phage vB_RspM_Barba13A, complete genome	37416-37447	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497233	Rheinheimera phage vB_RspM_barba10-9F, complete genome	9809-9840	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497257	Rheinheimera phage vB_RspM_barba12-7I, complete genome	27429-27460	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719701	Rheinheimera phage vB_RspM_Barba1A, complete genome	37314-37345	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719722	Rheinheimera phage vB_RspM_Barba14A, complete genome	37406-37437	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497241	Rheinheimera phage vB_RspM_barba12-6C, complete genome	53115-53146	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497252	Rheinheimera phage vB_RspM_barba12-7D, complete genome	52949-52980	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497227	Rheinheimera phage vB_RspM_barba10-8D, complete genome	60962-60993	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719738	Rheinheimera phage vB_RspM_Barba23S, complete genome	37416-37447	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719737	Rheinheimera phage vB_RspM_Barba23A, complete genome	37302-37333	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719703	Rheinheimera phage vB_RspM_Barba2A, complete genome	37426-37457	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497266	Rheinheimera phage vB_RspM_barba12-8I, complete genome	53050-53081	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719739	Rheinheimera phage vB_RspM_Barba24S, complete genome	37414-37445	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497270	Rheinheimera phage vB_RspM_barba12-9D, complete genome	31869-31900	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719715	Rheinheimera phage vB_RspM_Barba9A, complete genome	37472-37503	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719741	Rheinheimera phage vB_RspM_Barba25S, complete genome	37429-37460	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497240	Rheinheimera phage vB_RspM_barba12-6B, complete genome	53074-53105	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719754	Rheinheimera phage vB_RspM_Barba35A, complete genome	37280-37311	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719720	Rheinheimera phage vB_RspM_Barba12S, complete genome	37416-37447	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719749	Rheinheimera phage vB_RspM_Barba30A, complete genome	37311-37342	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719752	Rheinheimera phage vB_RspM_Barba33A, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719728	Rheinheimera phage vB_RspM_Barba17S, complete genome	38569-38600	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497253	Rheinheimera phage vB_RspM_barba12-7E, complete genome	49147-49178	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497258	Rheinheimera phage vB_RspM_barba12-7J, complete genome	60962-60993	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719702	Rheinheimera phage vB_RspM_Barba1S, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497229	Rheinheimera phage vB_RspM_barba10-9B, complete genome	11889-11920	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	NC_048190	Rheinheimera phage vB_RspM_Barba19A, complete genome	42191-42222	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719718	Rheinheimera phage vB_RspM_Barba11S, complete genome	37427-37458	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719719	Rheinheimera phage vB_RspM_Barba12A, complete genome	37415-37446	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719745	Rheinheimera phage vB_RspM_Barba28A, complete genome	37344-37375	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497230	Rheinheimera phage vB_RspM_barba10-9C, complete genome	70441-70472	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497251	Rheinheimera phage vB_RspM_barba12-7C, complete genome	11266-11297	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719740	Rheinheimera phage vB_RspM_Barba25A, complete genome	37358-37389	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	NC_048187	Rheinheimera phage vB_RspM_Barba5S, complete genome	39239-39270	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719726	Rheinheimera phage vB_RspM_Barba16S, complete genome	37417-37448	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497259	Rheinheimera phage vB_RspM_barba12-8A, complete genome	27568-27599	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497267	Rheinheimera phage vB_RspM_barba12-9A, complete genome	11420-11451	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497237	Rheinheimera phage vB_RspM_barba10-9J, complete genome	48505-48536	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719742	Rheinheimera phage vB_RspM_Barba26A, complete genome	38065-38096	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497275	Rheinheimera phage vB_RspM_barba12-9J, complete genome	11266-11297	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719736	Rheinheimera phage vB_RspM_Barba22S, complete genome	37416-37447	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497224	Rheinheimera phage vB_RspM_barba1-3A, complete genome	11266-11297	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497236	Rheinheimera phage vB_RspM_barba10-9I, complete genome	76529-76560	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497245	Rheinheimera phage vB_RspM_barba12-6G, complete genome	27610-27641	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497262	Rheinheimera phage vB_RspM_barba12-8E, complete genome	78404-78435	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497243	Rheinheimera phage vB_RspM_barba12-6E, complete genome	46616-46647	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719747	Rheinheimera phage vB_RspM_Barba29A, complete genome	37416-37447	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497265	Rheinheimera phage vB_RspM_barba12-8H, complete genome	17983-18014	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497279	Rheinheimera phage vB_RspM_barba5-7A, complete genome	11266-11297	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719723	Rheinheimera phage vB_RspM_Barba14S, complete genome	37386-37417	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MT497231	Rheinheimera phage vB_RspM_barba10-9D, complete genome	9694-9725	4	0.875
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	MK719731	Rheinheimera phage vB_RspM_Barba20A, complete genome	37416-37447	4	0.875
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KF626665	Phage Sano, complete genome	49412-49446	4	0.886
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MT773555	Myoviridae sp. isolate BML_3 genomic sequence	25549-25583	4	0.886
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP042619	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-4, complete sequence	78180-78214	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP048440	Escherichia coli strain NBRC 3301 plasmid putative_pEcol1, complete sequence	78340-78374	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_MF370216	Escherichia coli strain J53 plasmid pOX38-Gen, complete sequence	50840-50874	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	128353-128387	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	137509-137543	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MK492260	Escherichia coli strain MG1655 K12 plasmid F-Tn10, complete sequence	67189-67223	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP027256	Escherichia coli strain EC11 plasmid unnamed1, complete sequence	97574-97608	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP009167	Escherichia coli 1303 plasmid p1303_109, complete sequence	60713-60747	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_002483	Escherichia coli K-12 plasmid F DNA, complete sequence	58033-58067	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP011496	Escherichia coli strain NCM3722 isolate K-12 plasmid F, complete sequence	61567-61601	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	129682-129716	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	110636-110670	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	39755-39789	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	6322-6356	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	6034-6068	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	6313-6347	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	6331-6365	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	228692-228726	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	228404-228438	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	228683-228717	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	228701-228735	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KT224359	Bacillus phage TsarBomba, complete genome	6146-6180	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KT224359	Bacillus phage TsarBomba, complete genome	162268-162302	5	0.857
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	428560-428594	5	0.857
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	MK416015	Klebsiella phage ST16-OXA48phi5.4, complete genome	18599-18630	5	0.844
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN694016	Marine virus AFVG_250M811, complete genome	20630-20664	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN693800	Marine virus AFVG_250M813, complete genome	20618-20652	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN694554	Marine virus AFVG_250M812, complete genome	20632-20666	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP010124	Escherichia coli strain C5 plasmid B, complete genome	84574-84608	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	6220-6254	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	228590-228624	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	257194-257228	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	257176-257210	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652377-652411	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652395-652429	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652413-652447	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652545-652579	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	236090-236124	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	236099-236133	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	AJ972879	Yersinia phage phiR1-37 complete genome	63760-63794	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MH389777	Dickeya phage vB_DsoM_JA11, complete genome	220197-220231	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MH460462	Dickeya phage vB_DsoM_JA33, complete genome	220314-220348	6	0.829
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_016163	Yersinia phage phiR1-37, complete genome	63760-63794	6	0.829
NC_013592_7	7.3\|3915558\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915558-3915589	32	NZ_CP036456	Streptomonospora sp. M2 plasmid phiM2, complete sequence	81639-81670	6	0.812
NC_013592_7	7.7\|3915798\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915798-3915829	32	MT498053	Streptomyces phage PHTowN, complete genome	12501-12532	6	0.812
NC_013592_7	7.7\|3915798\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915798-3915829	32	MT897908	Streptomyces phage ShakeNBake, complete genome	12501-12532	6	0.812
NC_013592_9	9.1\|3931340\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3931340-3931371	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	966252-966283	6	0.812
NC_013592_9	9.28\|3932960\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932960-3932991	32	NZ_CP040762	Paracoccus sp. 2251 plasmid unnamed2, complete sequence	102511-102542	6	0.812
NC_013592_3	3.8\|682837\|32\|NC_013592\|CRISPRCasFinder,CRT	682837-682868	32	MN794002	Klebsiella phage VLC3, complete genome	9474-9505	7	0.781
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP042619	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-4, complete sequence	78189-78223	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN694016	Marine virus AFVG_250M811, complete genome	20639-20673	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN693800	Marine virus AFVG_250M813, complete genome	20627-20661	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN694554	Marine virus AFVG_250M812, complete genome	20641-20675	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP010124	Escherichia coli strain C5 plasmid B, complete genome	84565-84599	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	6229-6263	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	228599-228633	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KX607101	Acidianus two-tailed virus 2 isolate ATV2, complete genome	12112-12146	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MT536174	Stenotrophomonas phage vB_SmaS-AXL_3, complete genome	43807-43841	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MT536174	Stenotrophomonas phage vB_SmaS-AXL_3, complete genome	43816-43850	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652359-652393	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_021856	Bacillus phage phiNIT1 DNA, complete genome	1854-1888	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_021856	Bacillus phage phiNIT1 DNA, complete genome	152382-152416	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	CP030416	Staphylococcus aureus strain ER01836.3 plasmid unnamed1, complete sequence	4932-4966	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MH460460	Dickeya phage vB_DsoM_JA13, complete genome	219194-219228	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	JN797796	Bacillus phage B5S, complete genome	35751-35785	7	0.8
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_018863	Bacillus phage B4, complete genome	35696-35730	7	0.8
NC_013592_7	7.3\|3915558\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915558-3915589	32	NC_008270	Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence	113906-113937	7	0.781
NC_013592_7	7.3\|3915558\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915558-3915589	32	NZ_CP046574	Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence	139003-139034	7	0.781
NC_013592_8	8.5\|3921477\|32\|NC_013592\|CRISPRCasFinder,CRT	3921477-3921508	32	NC_014838	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	247949-247980	7	0.781
NC_013592_9	9.9\|3931820\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3931820-3931851	32	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	545480-545511	7	0.781
NC_013592_9	9.15\|3932180\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932180-3932211	32	NC_048758	Serratia phage Parlo, complete genome	23367-23398	7	0.781
NC_013592_9	9.20\|3932480\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932480-3932511	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	769528-769559	7	0.781
NC_013592_9	9.20\|3932480\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932480-3932511	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	139100-139131	7	0.781
NC_013592_9	9.28\|3932960\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932960-3932991	32	NZ_CP031600	Roseovarius indicus strain DSM 26383 plasmid pRIdsm_02, complete sequence	25703-25734	7	0.781
NC_013592_9	9.29\|3933020\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3933020-3933051	32	NZ_CP008945	Corynebacterium atypicum strain R2070 plasmid phiCATYP2070I, complete sequence	39753-39784	7	0.781
NC_013592_2	2.9\|406548\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406548-406579	32	NZ_CP018236	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed8	10408-10439	8	0.75
NC_013592_2	2.12\|406731\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406731-406762	32	NZ_CP011157	Bacillus cereus strain HN001 plasmid pRML02, complete sequence	102932-102963	8	0.75
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP042619	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-4, complete sequence	78198-78232	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP027256	Escherichia coli strain EC11 plasmid unnamed1, complete sequence	97565-97599	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MH553517	Serratia phage Scapp, complete genome	38658-38692	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	21887-21921	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	61730-61764	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP038792	Escherichia coli strain PF9285 plasmid pDW54_1, complete sequence	90527-90561	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP015239	Escherichia coli strain 2011C-3911 plasmid unnamed1, complete sequence	101307-101341	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP010239	Escherichia coli strain S50 plasmid A, complete sequence	7509-7543	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP047660	Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence	117155-117189	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP049102	Escherichia coli strain EC28 plasmid p2, complete sequence	125389-125423	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MH616710	Microviridae sp. isolate ctci871, complete genome	3392-3426	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KJ019084	Synechococcus phage ACG-2014a isolate Syn7803US123, complete genome	84444-84478	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	CP043737	Escherichia coli strain CVM N17EC0616 plasmid pN17EC0616-1, complete sequence	176754-176788	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP041415	Escherichia coli strain STEC719 plasmid pSTEC719_4, complete sequence	57517-57551	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP041421	Escherichia coli strain STEC711 plasmid pSTEC711_5, complete sequence	61528-61562	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	CP042897	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_01, complete sequence	147624-147658	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP022166	Escherichia coli strain M160133 plasmid pM160133_p2, complete sequence	126995-127029	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP010345	Escherichia coli ECC-1470 plasmid pECC-1470_100, complete sequence	54755-54789	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP011023	Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence	19538-19572	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN693047	Marine virus AFVG_25M111, complete genome	3777-3811	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN693506	Marine virus AFVG_25M112, complete genome	3778-3812	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MH047631	Microbacterium phage Triscuit, complete genome	18765-18799	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	239606-239640	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MH460463	Dickeya phage vB_DsoM_AD1, complete genome	241952-241986	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP025867	Escherichia coli strain 504211 plasmid p504211_50, complete sequence	42272-42306	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP025871	Escherichia coli strain 503829 plasmid p503829_52, complete sequence	1022-1056	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP022913	Escherichia coli O6:H16 strain 2011EL-1370-2 plasmid unnamed1, complete sequence	62734-62768	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	55885-55919	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP024249	Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence	69495-69529	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP025882	Escherichia coli strain 503440 plasmid p503440_52, complete sequence	28945-28979	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP025895	Escherichia coli strain 503025 plasmid p503025_52, complete sequence	5385-5419	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP017848	Escherichia coli strain FMU073332 plasmid pEcoFMU07332d sequence	132029-132063	8	0.771
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_009790	Escherichia coli O139:H28 str. E24377A plasmid pETEC_74, complete sequence	28557-28591	8	0.771
NC_013592_7	7.4\|3915618\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915618-3915649	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	527622-527653	8	0.75
NC_013592_7	7.9\|3915918\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915918-3915949	32	NZ_CP054609	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence	26207-26238	8	0.75
NC_013592_7	7.9\|3915918\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915918-3915949	32	NZ_CP054611	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed3, complete sequence	42968-42999	8	0.75
NC_013592_8	8.8\|3921657\|32\|NC_013592\|CRISPRCasFinder,CRT	3921657-3921688	32	MN036130	Leviviridae sp. isolate H3_Bulk_Litter_16_405 hypothetical protein (H3BulkLitter16405_000001) gene, partial cds; and hypothetical protein (H3BulkLitter16405_000002), hypothetical protein (H3BulkLitter16405_000003), and RNA-dependent RNA polymerase (H3BulkLitter16405_000004) genes, complete cds	553-584	8	0.75
NC_013592_8	8.16\|3922138\|32\|NC_013592\|CRISPRCasFinder,CRT	3922138-3922169	32	MN812211	Flavobacterium phage vB_FspS_laban6-1, complete genome	34061-34092	8	0.75
NC_013592_8	8.16\|3922138\|32\|NC_013592\|CRISPRCasFinder,CRT	3922138-3922169	32	CP003958	Rhodococcus opacus PD630 plasmid 9, complete sequence	34067-34098	8	0.75
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NZ_CP044989	Deinococcus sp. AJ005 plasmid p380k, complete sequence	268650-268681	8	0.75
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1164673-1164704	8	0.75
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	665670-665701	8	0.75
NC_013592_9	9.9\|3931820\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3931820-3931851	32	NZ_CP015203	Rhodococcus sp. 008 plasmid pR8L1, complete sequence	87369-87400	8	0.75
NC_013592_9	9.9\|3931820\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3931820-3931851	32	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	91062-91093	8	0.75
NC_013592_9	9.15\|3932180\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932180-3932211	32	MH426726	Erwinia phage Pavtok, complete genome	61309-61340	8	0.75
NC_013592_9	9.15\|3932180\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932180-3932211	32	NC_016767	Erwinia phage PEp14, complete genome	60654-60685	8	0.75
NC_013592_9	9.15\|3932180\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932180-3932211	32	MT251347	Klebsiella phage LASTA, complete genome	39157-39188	8	0.75
NC_013592_9	9.15\|3932180\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932180-3932211	32	MT251348	Klebsiella phage SJM3, complete genome	39157-39188	8	0.75
NC_013592_9	9.15\|3932180\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932180-3932211	32	MF612073	Klebsiella phage SopranoGao, complete genome	41314-41345	8	0.75
NC_013592_9	9.22\|3932600\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932600-3932631	32	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	261698-261729	8	0.75
NC_013592_9	9.24\|3932720\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932720-3932751	32	AB981620	Couchioplanes caeruleus subsp. azureus plasmid pCAZ1 DNA, complete sequence, strain: NBRC 13993	1707-1738	8	0.75
NC_013592_9	9.24\|3932720\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932720-3932751	32	NZ_CP044337	Enterobacter hormaechei strain AKB48 plasmid unnamed2, complete sequence	76507-76538	8	0.75
NC_013592_9	9.28\|3932960\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932960-3932991	32	NZ_CP022416	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence	119141-119172	8	0.75
NC_013592_2	2.7\|406426\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406426-406457	32	NZ_KJ776576	Clostridium botulinum strain Eklund2B plasmid pEklund2B, complete sequence	16893-16924	9	0.719
NC_013592_2	2.7\|406426\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406426-406457	32	NC_018653	Clostridium botulinum B str. Eklund 17B (NRP) plasmid p17BNRP, complete sequence	16876-16907	9	0.719
NC_013592_2	2.7\|406426\|32\|NC_013592\|CRISPRCasFinder,CRT,PILER-CR	406426-406457	32	NC_010680	Clostridium botulinum B str. Eklund 17B (NRP) plasmid pCLL, complete sequence	3345-3376	9	0.719
NC_013592_3	3.1\|682835\|34\|NC_013592\|PILER-CR	682835-682868	34	MN794002	Klebsiella phage VLC3, complete genome	9474-9507	9	0.735
NC_013592_5	5.2\|3676452\|32\|NC_013592\|CRISPRCasFinder	3676452-3676483	32	NZ_CP026119	Halobacillus litoralis strain ERB 031 plasmid pLDW-31, complete sequence	104738-104769	9	0.719
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MH553517	Serratia phage Scapp, complete genome	38649-38683	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MT536174	Stenotrophomonas phage vB_SmaS-AXL_3, complete genome	43765-43799	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MT536174	Stenotrophomonas phage vB_SmaS-AXL_3, complete genome	43774-43808	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MT536174	Stenotrophomonas phage vB_SmaS-AXL_3, complete genome	43783-43817	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MT536174	Stenotrophomonas phage vB_SmaS-AXL_3, complete genome	43798-43832	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KT995479	Bacillus phage BM5, complete genome	101593-101627	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN693873	Marine virus AFVG_250M921, complete genome	6612-6646	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	257185-257219	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	257212-257246	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	236081-236115	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN172529	Listeria phage LP-039, complete genome	116054-116088	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KJ094033	Listeria phage LP-048, complete genome	118511-118545	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KJ019039	Synechococcus phage ACG-2014a isolate Syn7803C60, complete genome	84447-84481	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	AJ888457	Acidianus two-tailed virus, complete viral genome	14082-14116	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	AJ888457	Acidianus two-tailed virus, complete viral genome	14073-14107	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KX607102	Acidianus two-tailed virus variant 1 isolate ATV.v1, complete genome	13030-13064	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KX607102	Acidianus two-tailed virus variant 1 isolate ATV.v1, complete genome	13021-13055	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_018986	Borrelia burgdorferi 297 plasmid 297_lp36, complete sequence	15555-15589	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1178631-1178665	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP031404	Borreliella burgdorferi strain MM1 plasmid plsm_lp36, complete sequence	16210-16244	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	CP030482	Staphylococcus aureus strain ER03913.3 plasmid unnamed1, complete sequence	14784-14818	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	CP030679	Staphylococcus aureus strain ER00573.3 plasmid unnamed2, complete sequence	5595-5629	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	CP030620	Staphylococcus aureus strain ER01524.3 plasmid unnamed1, complete sequence	3701-3735	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	922599-922633	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	CP030674	Staphylococcus aureus strain ER01533.3 plasmid unnamed1, complete sequence	23513-23547	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1230347-1230381	9	0.743
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	741085-741119	9	0.743
NC_013592_7	7.4\|3915618\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915618-3915649	32	NZ_CP015006	Aminobacter aminovorans strain KCTC 2477 plasmid pAA01, complete sequence	4871-4902	9	0.719
NC_013592_7	7.4\|3915618\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915618-3915649	32	NZ_CP015007	Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence	6102-6133	9	0.719
NC_013592_7	7.8\|3915858\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915858-3915889	32	MK977703	Arthrobacter phage Kumotta, complete genome	24727-24758	9	0.719
NC_013592_7	7.8\|3915858\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3915858-3915889	32	MH450123	Arthrobacter phage MargaretKali, complete genome	24362-24393	9	0.719
NC_013592_8	8.4\|3921417\|32\|NC_013592\|CRISPRCasFinder,CRT	3921417-3921448	32	MN856054	Bacteriophage sp. isolate 52, complete genome	19401-19432	9	0.719
NC_013592_8	8.14\|3922018\|32\|NC_013592\|CRISPRCasFinder,CRT	3922018-3922049	32	NC_041958	Roseobacter phage RDJL Phi 2, complete genome	43727-43758	9	0.719
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	14335-14366	9	0.719
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NZ_CP033227	Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence	90107-90138	9	0.719
NC_013592_8	8.18\|3922258\|32\|NC_013592\|CRISPRCasFinder,CRT	3922258-3922289	32	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	258595-258626	9	0.719
NC_013592_8	8.18\|3922258\|32\|NC_013592\|CRISPRCasFinder,CRT	3922258-3922289	32	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	255769-255800	9	0.719
NC_013592_9	9.2\|3931400\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3931400-3931431	32	NC_021529	Vibrio phage nt-1, complete genome	198613-198644	9	0.719
NC_013592_9	9.3\|3931460\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3931460-3931491	32	NZ_CP022543	Antarctobacter heliothermus strain SMS3 plasmid pSMS3-3, complete sequence	30494-30525	9	0.719
NC_013592_9	9.3\|3931460\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3931460-3931491	32	NZ_CP006989	Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence	165187-165218	9	0.719
NC_013592_9	9.4\|3931520\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3931520-3931551	32	NZ_CP011667	Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence	4932-4963	9	0.719
NC_013592_9	9.9\|3931820\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3931820-3931851	32	NZ_CP020740	[Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence	150819-150850	9	0.719
NC_013592_9	9.13\|3932060\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932060-3932091	32	MN850608	Escherichia phage megetsur, complete genome	34683-34714	9	0.719
NC_013592_9	9.22\|3932600\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932600-3932631	32	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	828760-828791	9	0.719
NC_013592_9	9.28\|3932960\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932960-3932991	32	NZ_CP014688	Acetobacter persici strain TMW2.1084 plasmid pAC1084_1, complete sequence	129808-129839	9	0.719
NC_013592_2	2.5\|406304\|32\|NC_013592\|CRISPRCasFinder,CRT	406304-406335	32	MN393079	Salmonella virus VSiA, complete genome	28664-28695	10	0.688
NC_013592_2	2.5\|406304\|32\|NC_013592\|CRISPRCasFinder,CRT	406304-406335	32	MH424444	Salmonella virus VSiP, complete genome	28784-28815	10	0.688
NC_013592_2	2.5\|406304\|32\|NC_013592\|CRISPRCasFinder,CRT	406304-406335	32	MN694189	Marine virus AFVG_250M578, complete genome	26179-26210	10	0.688
NC_013592_3	3.8\|682837\|32\|NC_013592\|CRISPRCasFinder,CRT	682837-682868	32	NZ_CP014336	Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence	19736-19767	10	0.688
NC_013592_3	3.9\|682898\|32\|NC_013592\|CRISPRCasFinder,CRT	682898-682929	32	NC_015969	UNVERIFIED_ORG: Enterobacter soli plasmid pENTAS02, complete sequence	10353-10384	10	0.688
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	5941-5975	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	228311-228345	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KX607101	Acidianus two-tailed virus 2 isolate ATV2, complete genome	12121-12155	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MT536174	Stenotrophomonas phage vB_SmaS-AXL_3, complete genome	43792-43826	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP028885	Borrelia turcica IST7 plasmid lp129, complete sequence	56430-56464	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP028885	Borrelia turcica IST7 plasmid lp129, complete sequence	56421-56455	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP041249	Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence	90896-90930	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	401761-401795	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	401770-401804	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	8191-8225	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_018986	Borrelia burgdorferi 297 plasmid 297_lp36, complete sequence	15564-15598	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_018986	Borrelia burgdorferi 297 plasmid 297_lp36, complete sequence	15573-15607	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	6421-6455	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	264235-264269	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	132955-132989	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	249956-249990	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	132955-132989	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	132463-132497	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	KC595513	Bacillus phage Shanette, complete genome	12163-12197	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_011421	Bacillus phage SPO1, complete genome	44380-44414	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_028982	Bacillus phage JL, complete genome	11976-12010	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	74422-74456	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	8618-8652	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_048106	Synechococcus phage S-CBWM1, complete genome	68863-68897	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN693609	Marine virus AFVG_250M479, complete genome	51999-52033	10	0.714
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MT135025	Vibrio phage V07, complete genome	306751-306785	10	0.714
NC_013592_8	8.6\|3921537\|32\|NC_013592\|CRISPRCasFinder,CRT	3921537-3921568	32	NC_019765	Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence	301532-301563	10	0.688
NC_013592_8	8.11\|3921837\|32\|NC_013592\|CRISPRCasFinder,CRT	3921837-3921868	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	667175-667206	10	0.688
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NZ_CP010616	Phaeobacter inhibens strain P92 plasmid pP92_f, complete sequence	15237-15268	10	0.688
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NZ_LN832560	Paracoccus aminovorans isolate JCM7685 plasmid II, complete sequence	135242-135273	10	0.688
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NZ_CP010635	Phaeobacter inhibens strain P78 plasmid pP78_f, complete sequence	15237-15268	10	0.688
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	689630-689661	10	0.688
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	722427-722458	10	0.688
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NZ_CP010755	Phaeobacter inhibens strain P70 plasmid pP70_f, complete sequence	15237-15268	10	0.688
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NZ_CP010713	Phaeobacter inhibens strain P66 plasmid pP66_h, complete sequence	15236-15267	10	0.688
NC_013592_8	8.17\|3922198\|32\|NC_013592\|CRISPRCasFinder,CRT	3922198-3922229	32	NZ_CP010740	Phaeobacter inhibens strain P72 plasmid pP72_e, complete sequence	15237-15268	10	0.688
NC_013592_9	9.13\|3932060\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932060-3932091	32	MN850617	Escherichia phage forsur, complete genome	20624-20655	10	0.688
NC_013592_9	9.13\|3932060\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932060-3932091	32	MN850624	Escherichia phage usur, complete genome	5256-5287	10	0.688
NC_013592_9	9.19\|3932420\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932420-3932451	32	NZ_CP015616	Acinetobacter schindleri strain ACE plasmid p1AsACE, complete sequence	7852-7883	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	36238-36269	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	601292-601323	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1429921-1429952	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1241926-1241957	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	685204-685235	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	710221-710252	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	841506-841537	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	341803-341834	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1023402-1023433	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	593790-593821	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	2026586-2026617	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1549063-1549094	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	687622-687653	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1566072-1566103	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	602862-602893	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	445829-445860	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	603124-603155	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	703693-703724	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	465361-465392	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	604426-604457	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1386586-1386617	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	687628-687659	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	703693-703724	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	664548-664579	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	691284-691315	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	703694-703725	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	710221-710252	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	603596-603627	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	664548-664579	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	691284-691315	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	703696-703727	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	664548-664579	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	603624-603655	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	664552-664583	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	691284-691315	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	691284-691315	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	691284-691315	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	703696-703727	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1347195-1347226	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	703696-703727	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	603624-603655	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	653358-653389	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	689815-689846	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	691271-691302	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	703696-703727	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	603624-603655	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	664548-664579	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	699558-699589	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	703690-703721	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	603624-603655	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	603624-603655	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	703696-703727	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	691286-691317	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1377819-1377850	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	703696-703727	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	703696-703727	10	0.688
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1377819-1377850	10	0.688
NC_013592_9	9.24\|3932720\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932720-3932751	32	NZ_CP039696	Novosphingobium sp. ABRDHK2 plasmid pABRDHK21, complete sequence	43718-43749	10	0.688
NC_013592_4	4.1\|3674346\|47\|NC_013592\|CRT	3674346-3674392	47	NZ_CP015111	Acinetobacter sp. TGL-Y2 plasmid unnamed1, complete sequence	284469-284515	11	0.766
NC_013592_4	4.5\|3674347\|47\|NC_013592\|CRISPRCasFinder	3674347-3674393	47	NZ_CP015111	Acinetobacter sp. TGL-Y2 plasmid unnamed1, complete sequence	284470-284516	11	0.766
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MN694145	Marine virus AFVG_250M840, complete genome	3955-3989	11	0.686
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP013192	Escherichia coli strain FORC_031 plasmid pFORC31.2, complete sequence	9555-9589	11	0.686
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NC_020909	Octadecabacter arcticus 238 plasmid pOA238_118, complete sequence	30322-30356	11	0.686
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	MH248138	Erwinia phage vB_EamM_Alexandra, complete genome	115336-115370	11	0.686
NC_013592_8	8.9\|3921717\|32\|NC_013592\|CRISPRCasFinder,CRT	3921717-3921748	32	NZ_AP015031	Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence	149747-149778	11	0.656
NC_013592_9	9.23\|3932660\|32\|NC_013592\|PILER-CR,CRISPRCasFinder,CRT	3932660-3932691	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1231514-1231545	11	0.656
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	11611-11645	12	0.657
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP014218	Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence	22871-22905	12	0.657
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP014147	Clostridium botulinum strain CDC_67190 plasmid pNPD12_2, complete sequence	28361-28395	12	0.657
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	47757-47791	12	0.657
NC_013592_5	5.7\|3676594\|35\|NC_013592\|CRT	3676594-3676628	35	NZ_CP031100	Clostridium botulinum strain CFSAN034202 plasmid p1_CFSAN034202, complete sequence	8544-8578	13	0.629

1. spacer 2.10|406609|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047287 (Proteus cibarius strain G11 plasmid p52, complete sequence) position: , mismatch: 4, identity: 0.875

tttgggataacggagaatttacgtgcatgaga	CRISPR spacer
tttgggataacggcgaatttacgtgcttaaaa	Protospacer
************* ************ *.*.*

2. spacer 2.10|406609|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053373 (Proteus cibarius strain G32 plasmid pG32-51, complete sequence) position: , mismatch: 4, identity: 0.875

tttgggataacggagaatttacgtgcatgaga	CRISPR spacer
tttgggataacggcgaatttacgtgcttaaaa	Protospacer
************* ************ *.*.*

3. spacer 2.10|406609|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047341 (Proteus cibarius strain ZF1 plasmid pZF1-cfr, complete sequence) position: , mismatch: 4, identity: 0.875

tttgggataacggagaatttacgtgcatgaga	CRISPR spacer
tttgggataacggcgaatttacgtgcttaaaa	Protospacer
************* ************ *.*.*

4. spacer 2.10|406609|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045009 (Proteus cibarius strain ZF2 plasmid pZF2-cfr, complete sequence) position: , mismatch: 4, identity: 0.875

tttgggataacggagaatttacgtgcatgaga	CRISPR spacer
tttgggataacggcgaatttacgtgcttaaaa	Protospacer
************* ************ *.*.*

5. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719709 (Rheinheimera phage vB_RspM_Barba5A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

6. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719748 (Rheinheimera phage vB_RspM_Barba29S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

7. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497264 (Rheinheimera phage vB_RspM_barba12-8G, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

8. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719716 (Rheinheimera phage vB_RspM_Barba10A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

9. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497235 (Rheinheimera phage vB_RspM_barba10-9H, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

10. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497268 (Rheinheimera phage vB_RspM_barba12-9B, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

11. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497226 (Rheinheimera phage vB_RspM_barba10-8B, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

12. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719713 (Rheinheimera phage vB_RspM_Barba8A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

13. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497239 (Rheinheimera phage vB_RspM_barba12-6A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

14. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497232 (Rheinheimera phage vB_RspM_barba10-9E, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

15. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719753 (Rheinheimera phage vB_RspM_Barba34A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

16. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497261 (Rheinheimera phage vB_RspM_barba12-8C, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

17. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497273 (Rheinheimera phage vB_RspM_barba12-9G, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

18. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719746 (Rheinheimera phage vB_RspM_Barba28S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

19. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497255 (Rheinheimera phage vB_RspM_barba12-7G, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

20. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719734 (Rheinheimera phage vB_RspM_Barba21S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

21. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497254 (Rheinheimera phage vB_RspM_barba12-7F, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

22. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497238 (Rheinheimera phage vB_RspM_barba11-8A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

23. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719744 (Rheinheimera phage vB_RspM_Barba27S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

24. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719717 (Rheinheimera phage vB_RspM_Barba10S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

25. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497256 (Rheinheimera phage vB_RspM_barba12-7H, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

26. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719732 (Rheinheimera phage vB_RspM_Barba20S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

27. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497247 (Rheinheimera phage vB_RspM_barba12-6I, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

28. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497263 (Rheinheimera phage vB_RspM_barba12-8F, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

29. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497242 (Rheinheimera phage vB_RspM_barba12-6D, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

30. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497246 (Rheinheimera phage vB_RspM_barba12-6H, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

31. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719711 (Rheinheimera phage vB_RspM_Barba6A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

32. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497260 (Rheinheimera phage vB_RspM_barba12-8B, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

33. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497278 (Rheinheimera phage vB_RspM_barba13-8A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

34. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497250 (Rheinheimera phage vB_RspM_barba12-7B, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

35. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719750 (Rheinheimera phage vB_RspM_Barba31A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

36. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719727 (Rheinheimera phage vB_RspM_Barba17A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

37. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719743 (Rheinheimera phage vB_RspM_Barba26S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

38. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719724 (Rheinheimera phage vB_RspM_Barba15A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

39. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497276 (Rheinheimera phage vB_RspM_barba13-4A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

40. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497234 (Rheinheimera phage vB_RspM_barba10-9G, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

41. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719708 (Rheinheimera phage vB_RspM_Barba4S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

42. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497249 (Rheinheimera phage vB_RspM_barba12-7A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

43. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NC_048191 (Rheinheimera phage vB_RspM_Barba21A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

44. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497269 (Rheinheimera phage vB_RspM_barba12-9C, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

45. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497272 (Rheinheimera phage vB_RspM_barba12-9F, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

46. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497248 (Rheinheimera phage vB_RspM_barba12-6J, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

47. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497225 (Rheinheimera phage vB_RspM_barba10-8A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

48. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719725 (Rheinheimera phage vB_RspM_Barba15S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

49. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719712 (Rheinheimera phage vB_RspM_Barba7A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

50. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497274 (Rheinheimera phage vB_RspM_barba12-9I, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

51. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497228 (Rheinheimera phage vB_RspM_barba10-9A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

52. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497271 (Rheinheimera phage vB_RspM_barba12-9E, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

53. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719704 (Rheinheimera phage vB_RspM_Barba2S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

54. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497244 (Rheinheimera phage vB_RspM_barba12-6F, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

55. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719705 (Rheinheimera phage vB_RspM_Barba3A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

56. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719706 (Rheinheimera phage vB_RspM_Barba3S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

57. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NC_048188 (Rheinheimera phage vB_RspM_Barba8S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

58. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719735 (Rheinheimera phage vB_RspM_Barba22A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

59. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719751 (Rheinheimera phage vB_RspM_Barba32A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

60. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NC_048189 (Rheinheimera phage vB_RspM_Barba18A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

61. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719707 (Rheinheimera phage vB_RspM_Barba4A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

62. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497277 (Rheinheimera phage vB_RspM_barba13-6A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

63. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719721 (Rheinheimera phage vB_RspM_Barba13A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

64. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497233 (Rheinheimera phage vB_RspM_barba10-9F, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

65. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497257 (Rheinheimera phage vB_RspM_barba12-7I, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

66. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719701 (Rheinheimera phage vB_RspM_Barba1A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

67. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719722 (Rheinheimera phage vB_RspM_Barba14A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

68. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497241 (Rheinheimera phage vB_RspM_barba12-6C, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

69. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497252 (Rheinheimera phage vB_RspM_barba12-7D, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

70. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497227 (Rheinheimera phage vB_RspM_barba10-8D, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

71. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719738 (Rheinheimera phage vB_RspM_Barba23S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

72. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719737 (Rheinheimera phage vB_RspM_Barba23A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

73. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719703 (Rheinheimera phage vB_RspM_Barba2A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

74. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497266 (Rheinheimera phage vB_RspM_barba12-8I, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

75. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719739 (Rheinheimera phage vB_RspM_Barba24S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

76. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497270 (Rheinheimera phage vB_RspM_barba12-9D, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

77. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719715 (Rheinheimera phage vB_RspM_Barba9A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

78. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719741 (Rheinheimera phage vB_RspM_Barba25S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

79. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497240 (Rheinheimera phage vB_RspM_barba12-6B, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

80. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719754 (Rheinheimera phage vB_RspM_Barba35A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

81. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719720 (Rheinheimera phage vB_RspM_Barba12S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

82. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719749 (Rheinheimera phage vB_RspM_Barba30A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

83. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719752 (Rheinheimera phage vB_RspM_Barba33A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

84. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719728 (Rheinheimera phage vB_RspM_Barba17S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

85. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497253 (Rheinheimera phage vB_RspM_barba12-7E, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

86. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497258 (Rheinheimera phage vB_RspM_barba12-7J, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

87. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719702 (Rheinheimera phage vB_RspM_Barba1S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

88. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497229 (Rheinheimera phage vB_RspM_barba10-9B, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

89. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NC_048190 (Rheinheimera phage vB_RspM_Barba19A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

90. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719718 (Rheinheimera phage vB_RspM_Barba11S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

91. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719719 (Rheinheimera phage vB_RspM_Barba12A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

92. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719745 (Rheinheimera phage vB_RspM_Barba28A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

93. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497230 (Rheinheimera phage vB_RspM_barba10-9C, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

94. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497251 (Rheinheimera phage vB_RspM_barba12-7C, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

95. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719740 (Rheinheimera phage vB_RspM_Barba25A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

96. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NC_048187 (Rheinheimera phage vB_RspM_Barba5S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

97. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719726 (Rheinheimera phage vB_RspM_Barba16S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

98. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497259 (Rheinheimera phage vB_RspM_barba12-8A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

99. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497267 (Rheinheimera phage vB_RspM_barba12-9A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

100. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497237 (Rheinheimera phage vB_RspM_barba10-9J, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

101. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719742 (Rheinheimera phage vB_RspM_Barba26A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

102. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497275 (Rheinheimera phage vB_RspM_barba12-9J, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

103. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719736 (Rheinheimera phage vB_RspM_Barba22S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

104. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497224 (Rheinheimera phage vB_RspM_barba1-3A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

105. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497236 (Rheinheimera phage vB_RspM_barba10-9I, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

106. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497245 (Rheinheimera phage vB_RspM_barba12-6G, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

107. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497262 (Rheinheimera phage vB_RspM_barba12-8E, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

108. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497243 (Rheinheimera phage vB_RspM_barba12-6E, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

109. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719747 (Rheinheimera phage vB_RspM_Barba29A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

110. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497265 (Rheinheimera phage vB_RspM_barba12-8H, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

111. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497279 (Rheinheimera phage vB_RspM_barba5-7A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

112. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719723 (Rheinheimera phage vB_RspM_Barba14S, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

113. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MT497231 (Rheinheimera phage vB_RspM_barba10-9D, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

114. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to MK719731 (Rheinheimera phage vB_RspM_Barba20A, complete genome) position: , mismatch: 4, identity: 0.875

tcagctataaaataatttttagtgcaccttat-	CRISPR spacer
tcagctataaaataatgtttagt-catattatt	Protospacer
**************** ****** **. ****

115. spacer 5.7|3676594|35|NC_013592|CRT matches to KF626665 (Phage Sano, complete genome) position: , mismatch: 4, identity: 0.886

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcctcttcttcctcttcatcctcttc-gtcctcgt	Protospacer
.***************** ******** ******.

116. spacer 5.7|3676594|35|NC_013592|CRT matches to MT773555 (Myoviridae sp. isolate BML_3 genomic sequence) position: , mismatch: 4, identity: 0.886

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcctcttcttcctcgtcttcctcgtct-tcctcat	Protospacer
.************** ******** *** ******

117. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP042619 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-4, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

118. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP048440 (Escherichia coli strain NBRC 3301 plasmid putative_pEcol1, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

119. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_MF370216 (Escherichia coli strain J53 plasmid pOX38-Gen, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

120. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

121. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

122. spacer 5.7|3676594|35|NC_013592|CRT matches to MK492260 (Escherichia coli strain MG1655 K12 plasmid F-Tn10, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

123. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP027256 (Escherichia coli strain EC11 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

124. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP009167 (Escherichia coli 1303 plasmid p1303_109, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

125. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_002483 (Escherichia coli K-12 plasmid F DNA, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

126. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP011496 (Escherichia coli strain NCM3722 isolate K-12 plasmid F, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

127. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

128. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttctttccgtt	Protospacer
.*************************** *** .

129. spacer 5.7|3676594|35|NC_013592|CRT matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
gccctcttcttcctcttcttcctcttct-tcctggc	Protospacer
 .************************** **** .

130. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
gtcctcttcttcctcttcgtcctcttcttcgtctt--	Protospacer
 ***************** *********  ***.*

131. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
gtcctcttcttcgtcttcgtcctcttcttcgtcct--	Protospacer
 *********** ***** *********  *****

132. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcctcttcgtcctcttcttcgtcttc-gtcatcat	Protospacer
.******** *********** ***** *** ***

133. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcgtcttcgtcctcttcttcctcttc-gtcctctt	Protospacer
.** ***** ***************** ******

134. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
gtcctcttcttcctcttcgtcctcttcttcgtctt--	Protospacer
 ***************** *********  ***.*

135. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
gtcctcttcttcgtcttcgtcctcttcttcgtcct--	Protospacer
 *********** ***** *********  *****

136. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcctcttcgtcctcttcttcgtcttc-gtcatcat	Protospacer
.******** *********** ***** *** ***

137. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcgtcttcgtcctcttcttcctcttc-gtcctctt	Protospacer
.** ***** ***************** ******

138. spacer 5.7|3676594|35|NC_013592|CRT matches to KT224359 (Bacillus phage TsarBomba, complete genome) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
gtcctcttcttcttcttcttcttcttct-tcctcgt	Protospacer
 ***********.********.****** *****.

139. spacer 5.7|3676594|35|NC_013592|CRT matches to KT224359 (Bacillus phage TsarBomba, complete genome) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
gtcctcttcttcttcttcttcttcttct-tcctcgt	Protospacer
 ***********.********.****** *****.

140. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 5, identity: 0.857

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
gtcctcttcgtcctcttcttcttcttcttcgtcct--	Protospacer
 ******** ***********.******  *****

141. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to MK416015 (Klebsiella phage ST16-OXA48phi5.4, complete genome) position: , mismatch: 5, identity: 0.844

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
caggcggcgcgcccggcgatctgcccgtaatg	Protospacer
************* **.************

142. spacer 5.7|3676594|35|NC_013592|CRT matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttcttcctcaa	Protospacer
.*************************** .*.. *

143. spacer 5.7|3676594|35|NC_013592|CRT matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttcttcctcaa	Protospacer
.*************************** .*.. *

144. spacer 5.7|3676594|35|NC_013592|CRT matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttcttcctcaa	Protospacer
.*************************** .*.. *

145. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP010124 (Escherichia coli strain C5 plasmid B, complete genome) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctc-ttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctctttccgttcct-	Protospacer
.*********************** ***.**.*..

146. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
gtcctcttcttcctcttcgtcgtcttc-gtcatctt	Protospacer
 ***************** ** ***** *** **

147. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
gtcctcttcttcctcttcgtcgtcttc-gtcatctt	Protospacer
 ***************** ** ***** *** **

148. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttc--tgtcctca	CRISPR spacer
ttcctcttcttcgtcttcttcctcttcctcgtctt--	Protospacer
.*********** **************  .***.*

149. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
ttcgtcttcttcgtcttcttcctcttcttcgtctt--	Protospacer
.** ******** ***************  ***.*

150. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
gtcctcttcttcgtcttcgtcctcttcttcgtctt--	Protospacer
 *********** ***** *********  ***.*

151. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
gtcctcttcttcgtcttcgtcctcttcttcgtctt--	Protospacer
 *********** ***** *********  ***.*

152. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
gtcctcttcttcgtcttcgtcctcttcttcgtctt--	Protospacer
 *********** ***** *********  ***.*

153. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
gtcctcttcttcgtcttcgtcctcttct-tcttcgt	Protospacer
 *********** ***** ********* **.**.

154. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
ttcgtcttcttcctcttcttcgtcttcttcgtctt--	Protospacer
.** ***************** ******  ***.*

155. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttct--gtcctca	CRISPR spacer
ttcgtcttcttcgtcttcttcctcttcttcgtctt--	Protospacer
.** ******** ***************  ***.*

156. spacer 5.7|3676594|35|NC_013592|CRT matches to AJ972879 (Yersinia phage phiR1-37 complete genome) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcctcctcttcttcttcttcctcttc-atcatcag	Protospacer
.*****.*****.************** .** ***

157. spacer 5.7|3676594|35|NC_013592|CRT matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
atcctcttcttcgtcttcttcgtcttc-gtcgtaat	Protospacer
 *********** ******** ***** *** * *

158. spacer 5.7|3676594|35|NC_013592|CRT matches to MH460462 (Dickeya phage vB_DsoM_JA33, complete genome) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
atcctcttcttcgtcttcttcgtcttc-gtcgtaat	Protospacer
 *********** ******** ***** *** * *

159. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_016163 (Yersinia phage phiR1-37, complete genome) position: , mismatch: 6, identity: 0.829

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcctcctcttcttcttcttcctcttc-atcatcag	Protospacer
.*****.*****.************** .** ***

160. spacer 7.3|3915558|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036456 (Streptomonospora sp. M2 plasmid phiM2, complete sequence) position: , mismatch: 6, identity: 0.812

acggcgtgg-cccgattccggggtggtactggc	CRISPR spacer
-ggtcatggacccgattcgggggtgggactggc	Protospacer
  * *.*** ******** ******* ******

161. spacer 7.7|3915798|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MT498053 (Streptomyces phage PHTowN, complete genome) position: , mismatch: 6, identity: 0.812

tgagatatcaggcatgggccggtaaccgcgat--	CRISPR spacer
ggagatgtccggcatgggccggta--cgcggtga	Protospacer
 *****.** **************  ****.*

162. spacer 7.7|3915798|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MT897908 (Streptomyces phage ShakeNBake, complete genome) position: , mismatch: 6, identity: 0.812

tgagatatcaggcatgggccggtaaccgcgat--	CRISPR spacer
ggagatgtccggcatgggccggta--cgcggtga	Protospacer
 *****.** **************  ****.*

163. spacer 9.1|3931340|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 6, identity: 0.812

-tcaacgaccgtcggcgctgtcagttgagataa	CRISPR spacer
ctcggcga-cggcggcgctgtcagttgacatag	Protospacer
 **..*** ** **************** ***.

164. spacer 9.28|3932960|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040762 (Paracoccus sp. 2251 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

cagatgtcagactggtctttcccgacagccgg	CRISPR spacer
cagatgtcgggctggtctttcccgaggccggg	Protospacer
********.*.************** . * **

165. spacer 3.8|682837|32|NC_013592|CRISPRCasFinder,CRT matches to MN794002 (Klebsiella phage VLC3, complete genome) position: , mismatch: 7, identity: 0.781

atgataccattgatgttttgcatatatgtcgg	CRISPR spacer
ctgataccacggatgttttgcatatgcggctg	Protospacer
 ********. **************..* * *

166. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP042619 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-4, complete sequence) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttcttcctctt	Protospacer
.*************************** .*...

167. spacer 5.7|3676594|35|NC_013592|CRT matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttcttcctctt	Protospacer
.*************************** .*...

168. spacer 5.7|3676594|35|NC_013592|CRT matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttcttcctctt	Protospacer
.*************************** .*...

169. spacer 5.7|3676594|35|NC_013592|CRT matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttcttcctctt	Protospacer
.*************************** .*...

170. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP010124 (Escherichia coli strain C5 plasmid B, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcttcttcctcttcttcctctt	Protospacer
.*************************** .*...

171. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttc--tgtcctca	CRISPR spacer
gtcatcttcgtcctcttcttcctcttcgtcgtctt--	Protospacer
 ** ***** *****************  .***.*

172. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttc--tgtcctca	CRISPR spacer
gtcatcttcgtcctcttcttcctcttcgtcgtctt--	Protospacer
 ** ***** *****************  .***.*

173. spacer 5.7|3676594|35|NC_013592|CRT matches to KX607101 (Acidianus two-tailed virus 2 isolate ATV2, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttctcctcttcctcttcttcctcttctgtttttt	Protospacer
.*.***.***********************..*.

174. spacer 5.7|3676594|35|NC_013592|CRT matches to MT536174 (Stenotrophomonas phage vB_SmaS-AXL_3, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcctcttcctcttcttcctcttcttcctcct	Protospacer
.*****.********************* .*..*

175. spacer 5.7|3676594|35|NC_013592|CRT matches to MT536174 (Stenotrophomonas phage vB_SmaS-AXL_3, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcctcttcttcctcttcttcctcctc-gcccgggt	Protospacer
.***********************.** *.**  .

176. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttc--tgtcctca	CRISPR spacer
gtcctcttcttcgtcttcgtcctcttcctcgtctt--	Protospacer
 *********** ***** ********  .***.*

177. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_021856 (Bacillus phage phiNIT1 DNA, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcttcttcctcctcctcctcttcattaatga	Protospacer
***************.**.********  *  * *

178. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_021856 (Bacillus phage phiNIT1 DNA, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcttcttcctcctcctcctcttcattaatga	Protospacer
***************.**.********  *  * *

179. spacer 5.7|3676594|35|NC_013592|CRT matches to CP030416 (Staphylococcus aureus strain ER01836.3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
atcctcttcatcctcttcatcctcttc-gtcttggt	Protospacer
 ******** ******** ******** ***.* .

180. spacer 5.7|3676594|35|NC_013592|CRT matches to MH460460 (Dickeya phage vB_DsoM_JA13, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttc--tgtcctca	CRISPR spacer
atcctcttcgtcctcttcgtcctcttcgtcgtctt--	Protospacer
 ******** ******** ********  .***.*

181. spacer 5.7|3676594|35|NC_013592|CRT matches to JN797796 (Bacillus phage B5S, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcctcttcgtcctcttcgtcctcttc-gttcgcgt	Protospacer
.******** ******** ******** **.* *.

182. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_018863 (Bacillus phage B4, complete genome) position: , mismatch: 7, identity: 0.8

ctcctcttcttcctcttcttcctcttctgtcctca-	CRISPR spacer
ttcctcttcgtcctcttcgtcctcttc-gttcgcgt	Protospacer
.******** ******** ******** **.* *.

183. spacer 7.3|3915558|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NC_008270 (Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence) position: , mismatch: 7, identity: 0.781

acggcgtggcccgattccggggtggtactggc-	CRISPR spacer
gccgcgtggcgcgagtccggggtggt-tgggca	Protospacer
.* ******* *** *********** . ***

184. spacer 7.3|3915558|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046574 (Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence) position: , mismatch: 7, identity: 0.781

acggcgtggcccgattccggggtggtactggc-	CRISPR spacer
gccgcgtggcgcgagtccggggtggt-tgggca	Protospacer
.* ******* *** *********** . ***

185. spacer 8.5|3921477|32|NC_013592|CRISPRCasFinder,CRT matches to NC_014838 (Pantoea sp. At-9b plasmid pPAT9B01, complete sequence) position: , mismatch: 7, identity: 0.781

cacgcgaagaagccgaccagcttattttgact---	CRISPR spacer
cacgcgaagaagccgagcagt---ttctgaatcgt	Protospacer
**************** ***.   **.*** *

186. spacer 9.9|3931820|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 7, identity: 0.781

agccagcgggcctttgttcggggcg--cgccagt	CRISPR spacer
cggcatcgggcctttgttcgcggcgctcgtca--	Protospacer
 * ** ************** ****  **.**

187. spacer 9.15|3932180|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NC_048758 (Serratia phage Parlo, complete genome) position: , mismatch: 7, identity: 0.781

ctggattgttgcgattgtagaaacgggtgtat	CRISPR spacer
tcgtaatgttgcgattgtagaaacaggagtaa	Protospacer
..* * ******************.** ***

188. spacer 9.20|3932480|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 7, identity: 0.781

tatcca-cataacgggatggtcaatgccgagtt	CRISPR spacer
-gtcgatcatgacgggatggtccatgccgagca	Protospacer
 .** * ***.*********** ********.

189. spacer 9.20|3932480|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 7, identity: 0.781

tatcca-cataacgggatggtcaatgccgagtt	CRISPR spacer
-gtcgatcatgacgggatggtccatgccgagca	Protospacer
 .** * ***.*********** ********.

190. spacer 9.28|3932960|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031600 (Roseovarius indicus strain DSM 26383 plasmid pRIdsm_02, complete sequence) position: , mismatch: 7, identity: 0.781

cagatgtcagactggtctttcccgacagccgg	CRISPR spacer
cggatgtcgggctggtctttcccgaggccggg	Protospacer
*.******.*.************** . * **

191. spacer 9.29|3933020|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008945 (Corynebacterium atypicum strain R2070 plasmid phiCATYP2070I, complete sequence) position: , mismatch: 7, identity: 0.781

gcatagatagacgggcaggcatcacgcatcgc	CRISPR spacer
gaaccgctagacgggcaaggatcacgcatcac	Protospacer
* *. * **********.* **********.*

192. spacer 2.9|406548|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018236 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed8) position: , mismatch: 8, identity: 0.75

gcgattgacgacgaaagggcgcgactggcatc	CRISPR spacer
gcgattgccgacgaaagagcgcgctttgccaa	Protospacer
******* *********.***** .* **

193. spacer 2.12|406731|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011157 (Bacillus cereus strain HN001 plasmid pRML02, complete sequence) position: , mismatch: 8, identity: 0.75

tcagctataaaataatttttagtgcaccttat	CRISPR spacer
tcagttataaaataattgttagtatccctctc	Protospacer
****.************ *****.. ***. .

194. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP042619 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-4, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcttcctcttcctcttcttcctcttcttcctctt	Protospacer
***.**.********************* .*...

195. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP027256 (Escherichia coli strain EC11 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcttcttcttcctcttcttcctcttcttcctctt	Protospacer
.**.************************ .*...

196. spacer 5.7|3676594|35|NC_013592|CRT matches to MH553517 (Serratia phage Scapp, complete genome) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca----	CRISPR spacer
ttcctcttcttcctcttcctcttct----tcatcagagg	Protospacer
.*****************.**.***    ** ***

197. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tatttcttcttcctcttcttcctcttctgggcttg	Protospacer
. ..*************************  **..

198. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tatttcttcttcctcttcttcctcttctgggcttg	Protospacer
. ..*************************  **..

199. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP038792 (Escherichia coli strain PF9285 plasmid pDW54_1, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

200. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP015239 (Escherichia coli strain 2011C-3911 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

201. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP010239 (Escherichia coli strain S50 plasmid A, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

202. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP047660 (Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

203. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP049102 (Escherichia coli strain EC28 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

204. spacer 5.7|3676594|35|NC_013592|CRT matches to MH616710 (Microviridae sp. isolate ctci871, complete genome) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
cgcctcttcttctttttcttcctcttctgtatctc	Protospacer
* **********.*.*************** ...

205. spacer 5.7|3676594|35|NC_013592|CRT matches to KJ019084 (Synechococcus phage ACG-2014a isolate Syn7803US123, complete genome) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcttcttcttcttcttctggattat	Protospacer
.***********.********.*******  .*

206. spacer 5.7|3676594|35|NC_013592|CRT matches to CP043737 (Escherichia coli strain CVM N17EC0616 plasmid pN17EC0616-1, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

207. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP041415 (Escherichia coli strain STEC719 plasmid pSTEC719_4, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

208. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP041421 (Escherichia coli strain STEC711 plasmid pSTEC711_5, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

209. spacer 5.7|3676594|35|NC_013592|CRT matches to CP042897 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_01, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

210. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP022166 (Escherichia coli strain M160133 plasmid pM160133_p2, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

211. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP010345 (Escherichia coli ECC-1470 plasmid pECC-1470_100, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcctcttcctcttcttcctcttctttccgtt	Protospacer
.*..**.********************* *** .

212. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP011023 (Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
cacctcttcttcttcttcatcctcttctgcaaact	Protospacer
* **********.***** **********.   *

213. spacer 5.7|3676594|35|NC_013592|CRT matches to MN693047 (Marine virus AFVG_25M111, complete genome) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcttcttcttcttcttcttcttcgtcataca	Protospacer
************.********.*****  . . **

214. spacer 5.7|3676594|35|NC_013592|CRT matches to MN693506 (Marine virus AFVG_25M112, complete genome) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcttcttcttcttcttcttcttcgtcataca	Protospacer
************.********.*****  . . **

215. spacer 5.7|3676594|35|NC_013592|CRT matches to MH047631 (Microbacterium phage Triscuit, complete genome) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcctcttcctcctcttcctcttcggactcgt	Protospacer
******.********.*********** * *..

216. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctcttc----tgtcctca	CRISPR spacer
gtcttcttcttcctcttcttcgtcttcgtcttgtt----	Protospacer
 **.***************** *****    ***.

217. spacer 5.7|3676594|35|NC_013592|CRT matches to MH460463 (Dickeya phage vB_DsoM_AD1, complete genome) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctctt--ctgtcctca	CRISPR spacer
ttcctcttcttcgtcatcttcctcttcgccatctt--	Protospacer
.*********** ** **********  *..**.*

218. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP025867 (Escherichia coli strain 504211 plasmid p504211_50, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctc-ttctgtcctca	CRISPR spacer
ttcttcttcttcttcttcttcctctttccgttcct-	Protospacer
.**.********.*********** ***.**.*..

219. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP025871 (Escherichia coli strain 503829 plasmid p503829_52, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctc-ttctgtcctca	CRISPR spacer
ttcttcttcttcttcttcttcctctttccgttcct-	Protospacer
.**.********.*********** ***.**.*..

220. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP022913 (Escherichia coli O6:H16 strain 2011EL-1370-2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctc-ttctgtcctca	CRISPR spacer
ttcttcttcttcttcttcttcctctttccgttcct-	Protospacer
.**.********.*********** ***.**.*..

221. spacer 5.7|3676594|35|NC_013592|CRT matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctc-ttctgtcctca	CRISPR spacer
ttcttcttcttcttcttcttcctctttccgttcct-	Protospacer
.**.********.*********** ***.**.*..

222. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP024249 (Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctc-ttctgtcctca	CRISPR spacer
ttcttcttcttcttcttcttcctctttccgttcct-	Protospacer
.**.********.*********** ***.**.*..

223. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP025882 (Escherichia coli strain 503440 plasmid p503440_52, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctc-ttctgtcctca	CRISPR spacer
ttcttcttcttcttcttcttcctctttccgttcct-	Protospacer
.**.********.*********** ***.**.*..

224. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP025895 (Escherichia coli strain 503025 plasmid p503025_52, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctc-ttctgtcctca	CRISPR spacer
ttcttcttcttcttcttcttcctctttccgttcct-	Protospacer
.**.********.*********** ***.**.*..

225. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP017848 (Escherichia coli strain FMU073332 plasmid pEcoFMU07332d sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctc-ttctgtcctca	CRISPR spacer
ttcttcttcttcttcttcttcctctttccgttcct-	Protospacer
.**.********.*********** ***.**.*..

226. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_009790 (Escherichia coli O139:H28 str. E24377A plasmid pETEC_74, complete sequence) position: , mismatch: 8, identity: 0.771

ctcctcttcttcctcttcttcctc-ttctgtcctca	CRISPR spacer
ttcttcttcttcttcttcttcctctttccgttcct-	Protospacer
.**.********.*********** ***.**.*..

227. spacer 7.4|3915618|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 8, identity: 0.75

ttgatgacacagaaaagctcgaccgcaaacaa	CRISPR spacer
ttgatgacacagaacagatcgaccagggaaat	Protospacer
************** ** ******. ..* *

228. spacer 7.9|3915918|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatcgaattccgtattaaaatcctgctgcgt	CRISPR spacer
ttatcgaatttcgtatgaaaatcagaaagcct	Protospacer
**********.***** ******  .  ** *

229. spacer 7.9|3915918|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054611 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

ttatcgaattccgtattaaaatcctgctgcgt	CRISPR spacer
ttatcgaatttcgtatgaaaatcagaaagcct	Protospacer
**********.***** ******  .  ** *

230. spacer 8.8|3921657|32|NC_013592|CRISPRCasFinder,CRT matches to MN036130 (Leviviridae sp. isolate H3_Bulk_Litter_16_405 hypothetical protein (H3BulkLitter16405_000001) gene, partial cds; and hypothetical protein (H3BulkLitter16405_000002), hypothetical protein (H3BulkLitter16405_000003), and RNA-dependent RNA polymerase (H3BulkLitter16405_000004) genes, complete cds) position: , mismatch: 8, identity: 0.75

gccgacactttcggcttcaatcgtgcgccgca	CRISPR spacer
ctacacactttcgacttcaatcgtgcgctaga	Protospacer
 .  *********.**************.. *

231. spacer 8.16|3922138|32|NC_013592|CRISPRCasFinder,CRT matches to MN812211 (Flavobacterium phage vB_FspS_laban6-1, complete genome) position: , mismatch: 8, identity: 0.75

ggttaactccgtgcggttcttcagcattccca	CRISPR spacer
aattaactccttgcggttcttctgcaaactct	Protospacer
..******** *********** ***  *.*

232. spacer 8.16|3922138|32|NC_013592|CRISPRCasFinder,CRT matches to CP003958 (Rhodococcus opacus PD630 plasmid 9, complete sequence) position: , mismatch: 8, identity: 0.75

ggttaactccgtgcggttcttcagcattccca	CRISPR spacer
ggcgtactccgcgcggttctgcagcattgcgg	Protospacer
**.  ******.******** ******* * .

233. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_CP044989 (Deinococcus sp. AJ005 plasmid p380k, complete sequence) position: , mismatch: 8, identity: 0.75

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
acctcggcgcggcgggtgatctgcccggcttc	Protospacer
    ******* ***************  * *

234. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 8, identity: 0.75

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
gcggcggcgtgccgggtgatttgcccgaacct	Protospacer
  *******.**********.****** *. .

235. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
catgcggcgcgccgggtggtctgtgccgagcc	Protospacer
** ***************.****. *  *  *

236. spacer 9.9|3931820|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015203 (Rhodococcus sp. 008 plasmid pR8L1, complete sequence) position: , mismatch: 8, identity: 0.75

agccagcgggcctttgttcggggcgcgccagt	CRISPR spacer
gggcagcgggccatttttcggggcgcttctgc	Protospacer
.* ********* ** ********** .* *.

237. spacer 9.9|3931820|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

agccagcgggcctttgttcggggcgcgccagt	CRISPR spacer
gggcagcgggccatttttcggggcgcttctgc	Protospacer
.* ********* ** ********** .* *.

238. spacer 9.15|3932180|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MH426726 (Erwinia phage Pavtok, complete genome) position: , mismatch: 8, identity: 0.75

ctggattgttgcgattgtagaaacgggtgtat	CRISPR spacer
tcgcgctgttgcgattgtagaaacgggagttc	Protospacer
..* ..********************* ** .

239. spacer 9.15|3932180|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NC_016767 (Erwinia phage PEp14, complete genome) position: , mismatch: 8, identity: 0.75

ctggattgttgcgattgtagaaacgggtgtat	CRISPR spacer
tcgcgctgttgcgattgtagaaacgggagttc	Protospacer
..* ..********************* ** .

240. spacer 9.15|3932180|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MT251347 (Klebsiella phage LASTA, complete genome) position: , mismatch: 8, identity: 0.75

ctggattgttgcgattgtagaaacgggtgtat	CRISPR spacer
tcgctttgttgcgattgtagaaacaggggtta	Protospacer
..*  *******************.** **

241. spacer 9.15|3932180|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MT251348 (Klebsiella phage SJM3, complete genome) position: , mismatch: 8, identity: 0.75

ctggattgttgcgattgtagaaacgggtgtat	CRISPR spacer
tcgctttgttgcgattgtagaaacaggggtta	Protospacer
..*  *******************.** **

242. spacer 9.15|3932180|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MF612073 (Klebsiella phage SopranoGao, complete genome) position: , mismatch: 8, identity: 0.75

ctggattgttgcgattgtagaaacgggtgtat	CRISPR spacer
tcgctttgttgcgattgtagaaacaggggtta	Protospacer
..*  *******************.** **

243. spacer 9.22|3932600|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 8, identity: 0.75

gttgacccagcgacatgccgcgcacgcgttcg	CRISPR spacer
agtcccgcagcggcacgccgcgcacgcgttcc	Protospacer
. *  * *****.**.***************

244. spacer 9.24|3932720|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to AB981620 (Couchioplanes caeruleus subsp. azureus plasmid pCAZ1 DNA, complete sequence, strain: NBRC 13993) position: , mismatch: 8, identity: 0.75

---ggcgcgcacggtatgaccgggcaatgcaggct	CRISPR spacer
ccgaacgc---cggtatgaacgggccatgcaggca	Protospacer
   ..***   ******** ***** ********

245. spacer 9.24|3932720|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044337 (Enterobacter hormaechei strain AKB48 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgcgcacggtatgaccgggcaatgcaggct	CRISPR spacer
gggtcacacggtatgcccgggcaaagcagcgg	Protospacer
**  *.********* ******** ****

246. spacer 9.28|3932960|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022416 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence) position: , mismatch: 8, identity: 0.75

cagatgtcagactggtctttcccgacagccgg	CRISPR spacer
tcgatgtcggactgatctttcccgaggccggg	Protospacer
. ******.*****.********** . * **

247. spacer 2.7|406426|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KJ776576 (Clostridium botulinum strain Eklund2B plasmid pEklund2B, complete sequence) position: , mismatch: 9, identity: 0.719

gaagaggataatcgaattgttatctattatct	CRISPR spacer
ttggaggataatagaattcttatctaggataa	Protospacer
  .********* ***** *******  **

248. spacer 2.7|406426|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NC_018653 (Clostridium botulinum B str. Eklund 17B (NRP) plasmid p17BNRP, complete sequence) position: , mismatch: 9, identity: 0.719

gaagaggataatcgaattgttatctattatct	CRISPR spacer
ttggaggataatagaattcttatctaggataa	Protospacer
  .********* ***** *******  **

249. spacer 2.7|406426|32|NC_013592|CRISPRCasFinder,CRT,PILER-CR matches to NC_010680 (Clostridium botulinum B str. Eklund 17B (NRP) plasmid pCLL, complete sequence) position: , mismatch: 9, identity: 0.719

gaagaggataatcgaattgttatctattatct	CRISPR spacer
ttggaggataatagaattcttatctaggataa	Protospacer
  .********* ***** *******  **

250. spacer 3.1|682835|34|NC_013592|PILER-CR matches to MN794002 (Klebsiella phage VLC3, complete genome) position: , mismatch: 9, identity: 0.735

cgatgataccattgatgttttgcatatatgtcgg	CRISPR spacer
tactgataccacggatgttttgcatatgcggctg	Protospacer
.. ********. **************..* * *

251. spacer 5.2|3676452|32|NC_013592|CRISPRCasFinder matches to NZ_CP026119 (Halobacillus litoralis strain ERB 031 plasmid pLDW-31, complete sequence) position: , mismatch: 9, identity: 0.719

gtttgaacttgttttgcatgatcagcacgatc	CRISPR spacer
aaatgaatttgttttgcatgatgagcattaat	Protospacer
.  ****.************** ****. * .

252. spacer 5.7|3676594|35|NC_013592|CRT matches to MH553517 (Serratia phage Scapp, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
gtcctcttcttcctcttcttcctcttcctcttctt	Protospacer
 **************************. .....

253. spacer 5.7|3676594|35|NC_013592|CRT matches to MT536174 (Stenotrophomonas phage vB_SmaS-AXL_3, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcttcctcctcttcctcctcttcctcctctt	Protospacer
*********.********.********. .*...

254. spacer 5.7|3676594|35|NC_013592|CRT matches to MT536174 (Stenotrophomonas phage vB_SmaS-AXL_3, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcttcctcctcttcctcctcttcctcctctt	Protospacer
*********.********.********. .*...

255. spacer 5.7|3676594|35|NC_013592|CRT matches to MT536174 (Stenotrophomonas phage vB_SmaS-AXL_3, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcttcctcctcttcctcctcttcctcctctt	Protospacer
*********.********.********. .*...

256. spacer 5.7|3676594|35|NC_013592|CRT matches to MT536174 (Stenotrophomonas phage vB_SmaS-AXL_3, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcctcttcctcctcttcctcttcttcctctt	Protospacer
.*****.********.************ .*...

257. spacer 5.7|3676594|35|NC_013592|CRT matches to KT995479 (Bacillus phage BM5, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
actctcttcttcctcttcttcctcttcttcgttgt	Protospacer
 ..************************* . .*

258. spacer 5.7|3676594|35|NC_013592|CRT matches to MN693873 (Marine virus AFVG_250M921, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcatcctcttcttcctcttccgcttctt	Protospacer
.******** *****************.*.....

259. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcgtcttcttcctcttcttcgtcttcttcctctt	Protospacer
.** ***************** ****** .*...

260. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcctcgtcttcttcctcttctacctcgt	Protospacer
.********.** ***************..*..

261. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcgtcttcttcgtcttcttcgcctt	Protospacer
.*********** ******** ****** . *..

262. spacer 5.7|3676594|35|NC_013592|CRT matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
gagcccttcttcttcttcttcctcttctgtgcggg	Protospacer
   *.*******.***************** *  .

263. spacer 5.7|3676594|35|NC_013592|CRT matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
gagcccttcttcttcttcttcctcttctgtgcggg	Protospacer
   *.*******.***************** *  .

264. spacer 5.7|3676594|35|NC_013592|CRT matches to KJ019039 (Synechococcus phage ACG-2014a isolate Syn7803C60, complete genome) position: , mismatch: 9, identity: 0.743

---ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcttcttcttcttcttcttctggat---	Protospacer
   ***.********.********.*******  .

265. spacer 5.7|3676594|35|NC_013592|CRT matches to AJ888457 (Acidianus two-tailed virus, complete viral genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttctcttcctcctcttcttcctcttcttcttttt	Protospacer
.*.******.****************** ...*.

266. spacer 5.7|3676594|35|NC_013592|CRT matches to AJ888457 (Acidianus two-tailed virus, complete viral genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcttcttcctcttcttcttttttgccacgga	Protospacer
*********************.*.**.  . *  *

267. spacer 5.7|3676594|35|NC_013592|CRT matches to KX607102 (Acidianus two-tailed virus variant 1 isolate ATV.v1, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttctcttcctcctcttcttcctcttcttcttttt	Protospacer
.*.******.****************** ...*.

268. spacer 5.7|3676594|35|NC_013592|CRT matches to KX607102 (Acidianus two-tailed virus variant 1 isolate ATV.v1, complete genome) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcttcttcctcttcttcttttttgccacgga	Protospacer
*********************.*.**.  . *  *

269. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_018986 (Borrelia burgdorferi 297 plasmid 297_lp36, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttc----tgtcctca	CRISPR spacer
atcctcttcatcctcttcatcctcttcatcatatt----	Protospacer
 ******** ******** ********    *.*.

270. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
atcctcctcgtcctcttcttcctcttcggcggcga	Protospacer
 *****.** ***************** *.  . *

271. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP031404 (Borreliella burgdorferi strain MM1 plasmid plsm_lp36, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttc----tgtcctca	CRISPR spacer
ttcctcttcatcctcttcatcctcttcatcatatt----	Protospacer
.******** ******** ********    *.*.

272. spacer 5.7|3676594|35|NC_013592|CRT matches to CP030482 (Staphylococcus aureus strain ER03913.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcttcttcttcctcttcttcgtctttttgaagta	Protospacer
***.***************** ****.*     .*

273. spacer 5.7|3676594|35|NC_013592|CRT matches to CP030679 (Staphylococcus aureus strain ER00573.3 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcttcttcttcctcttcttcgtctttttgaagta	Protospacer
***.***************** ****.*     .*

274. spacer 5.7|3676594|35|NC_013592|CRT matches to CP030620 (Staphylococcus aureus strain ER01524.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcttcttcttcctcttcttcgtctttttgaagta	Protospacer
***.***************** ****.*     .*

275. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
atcctcctcgtcctcttcttcctcttcggcggcga	Protospacer
 *****.** ***************** *.  . *

276. spacer 5.7|3676594|35|NC_013592|CRT matches to CP030674 (Staphylococcus aureus strain ER01533.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcttcttcttcctcttcttcgtctttttgaagta	Protospacer
***.***************** ****.*     .*

277. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
atcctcctcgtcctcttcttcctcttcggcggcga	Protospacer
 *****.** ***************** *.  . *

278. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 9, identity: 0.743

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
atcctcctcgtcctcttcttcctcttcggcggcga	Protospacer
 *****.** ***************** *.  . *

279. spacer 7.4|3915618|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015006 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA01, complete sequence) position: , mismatch: 9, identity: 0.719

ttgatgacacagaaaagctcgaccgcaaacaa	CRISPR spacer
agcgcgggacagaaaagctcgaccggaaacac	Protospacer
   ..*. ***************** *****

280. spacer 7.4|3915618|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015007 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence) position: , mismatch: 9, identity: 0.719

ttgatgacacagaaaagctcgaccgcaaacaa	CRISPR spacer
agcgcgggacagaaaagctcgaccggaaacac	Protospacer
   ..*. ***************** *****

281. spacer 7.8|3915858|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MK977703 (Arthrobacter phage Kumotta, complete genome) position: , mismatch: 9, identity: 0.719

taggcagcccatcgctgaccgggactccaacc	CRISPR spacer
cgggcagcccagcgctgaccaggacagccttc	Protospacer
..********* ********.****  *  .*

282. spacer 7.8|3915858|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MH450123 (Arthrobacter phage MargaretKali, complete genome) position: , mismatch: 9, identity: 0.719

taggcagcccatcgctgaccgggactccaacc	CRISPR spacer
cgggcagcccagcgctgaccaggacagccttc	Protospacer
..********* ********.****  *  .*

283. spacer 8.4|3921417|32|NC_013592|CRISPRCasFinder,CRT matches to MN856054 (Bacteriophage sp. isolate 52, complete genome) position: , mismatch: 9, identity: 0.719

gaacgtaatttgccggaatagcgatagtcatg	CRISPR spacer
tggctgcatttgccggaatagccatagccata	Protospacer
 ..*   *************** ****.***.

284. spacer 8.14|3922018|32|NC_013592|CRISPRCasFinder,CRT matches to NC_041958 (Roseobacter phage RDJL Phi 2, complete genome) position: , mismatch: 9, identity: 0.719

gcgctgatgcgggtttggccgttgacctgccg	CRISPR spacer
aagccgatgcgcgtttggccgttgacgcttcc	Protospacer
. **.****** ************** . .*

285. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 9, identity: 0.719

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
gaggcggcgcgccgggtgctccgccgggcctg	Protospacer
 ***************** **.*** *  .

286. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_CP033227 (Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence) position: , mismatch: 9, identity: 0.719

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
gaggcggcgcgccgggtgctccgccgggcctg	Protospacer
 ***************** **.*** *  .

287. spacer 8.18|3922258|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 9, identity: 0.719

gagaccggcaatattcccggtgcgctgatgca	CRISPR spacer
gtcggcggccatattccgggtgcgctgaaccg	Protospacer
*  . **** ******* **********  *.

288. spacer 8.18|3922258|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 9, identity: 0.719

gagaccggcaatattcccggtgcgctgatgca	CRISPR spacer
gtcggcggccatattccgggtgcgctgaaccg	Protospacer
*  . **** ******* **********  *.

289. spacer 9.2|3931400|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NC_021529 (Vibrio phage nt-1, complete genome) position: , mismatch: 9, identity: 0.719

-gccacctgctggggctgaatattatgatggac	CRISPR spacer
cgtta-ctgctggtgctgaatatgatgattacg	Protospacer
 *..* ******* ********* ***** .

290. spacer 9.3|3931460|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022543 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-3, complete sequence) position: , mismatch: 9, identity: 0.719

atcccggcactcgtcagcgaggagtacataga	CRISPR spacer
tggccggcactggtcagcgaggggtatttcgc	Protospacer
   ******** **********.***. * *

291. spacer 9.3|3931460|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006989 (Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence) position: , mismatch: 9, identity: 0.719

atcccggcactcgtcagcgaggagtacataga	CRISPR spacer
atcccgccactcttcagcgaggacgataccct	Protospacer
****** ***** **********  *.*.

292. spacer 9.4|3931520|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011667 (Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcgttgcccaacccttccacgaggtggaa	CRISPR spacer
gatcttgtgcccagcccttcgacgaggtggag	Protospacer
  *..  ******.****** **********.

293. spacer 9.9|3931820|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020740 ([Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence) position: , mismatch: 9, identity: 0.719

agccagcgggcctttgttcggggcgcgccagt	CRISPR spacer
ccccagcgggccattgttccgggcgggggatg	Protospacer
  ********** ****** ***** *  *

294. spacer 9.13|3932060|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MN850608 (Escherichia phage megetsur, complete genome) position: , mismatch: 9, identity: 0.719

aataaggcgtaccgcctgcgcgtgcttgatcg	CRISPR spacer
cacccggcgtaccgccagcgcctgcttggttc	Protospacer
 *.  *********** **** ******.*.

295. spacer 9.22|3932600|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 9, identity: 0.719

gttgacccagcgacatgccgcgcacgcgttcg	CRISPR spacer
gcgtgagcagcgtcatgccccgcacgcgtttg	Protospacer
*.  .  ***** ****** **********.*

296. spacer 9.28|3932960|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014688 (Acetobacter persici strain TMW2.1084 plasmid pAC1084_1, complete sequence) position: , mismatch: 9, identity: 0.719

cagatgtcagactggtctttcccgacagccgg	CRISPR spacer
ttgaagtctgactggtctttcccgatctcctt	Protospacer
. ** *** ****************.  **

297. spacer 2.5|406304|32|NC_013592|CRISPRCasFinder,CRT matches to MN393079 (Salmonella virus VSiA, complete genome) position: , mismatch: 10, identity: 0.688

gctttttcagccgcagaatttaccgcgacctc	CRISPR spacer
aatgtttcagccgcagaacttagcgcgtgggt	Protospacer
. * **************.*** ****    .

298. spacer 2.5|406304|32|NC_013592|CRISPRCasFinder,CRT matches to MH424444 (Salmonella virus VSiP, complete genome) position: , mismatch: 10, identity: 0.688

gctttttcagccgcagaatttaccgcgacctc	CRISPR spacer
aatgtttcagccgcagaacttagcgcgtgggt	Protospacer
. * **************.*** ****    .

299. spacer 2.5|406304|32|NC_013592|CRISPRCasFinder,CRT matches to MN694189 (Marine virus AFVG_250M578, complete genome) position: , mismatch: 10, identity: 0.688

gctttttcagccgcagaatttaccgcgacctc	CRISPR spacer
tctttttcagctggagaatttaccttttctaa	Protospacer
 **********.* ********** .  *.

300. spacer 3.8|682837|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 10, identity: 0.688

atgataccattgatgttttgcatatatgtcgg	CRISPR spacer
aatccttagttaatgttttgcatatatgtagg	Protospacer
*   . . .**.***************** **

301. spacer 3.9|682898|32|NC_013592|CRISPRCasFinder,CRT matches to NC_015969 (UNVERIFIED_ORG: Enterobacter soli plasmid pENTAS02, complete sequence) position: , mismatch: 10, identity: 0.688

tgcgagtgggcatgtatcagggttccacaact	CRISPR spacer
gctcaccgggcaggtatcagcgttccacaagg	Protospacer
  . * .***** ******* *********

302. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcttcttcttcctcttcttcttcttcctcgtctg	Protospacer
***.*****************.*****. . ....

303. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcttcttcttcctcttcttcttcttcctcgtctg	Protospacer
***.*****************.*****. . ....

304. spacer 5.7|3676594|35|NC_013592|CRT matches to KX607101 (Acidianus two-tailed virus 2 isolate ATV2, complete genome) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttctcttctttctcctcttcctcttcttcctctt	Protospacer
.*.********.***.************ .*...

305. spacer 5.7|3676594|35|NC_013592|CRT matches to MT536174 (Stenotrophomonas phage vB_SmaS-AXL_3, complete genome) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ctcctcttcctcctcttcctcctcttcctcttctt	Protospacer
*********.********.********. .....

306. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP028885 (Borrelia turcica IST7 plasmid lp129, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
gtcgtcttcttcgtcttcttcctcttcttcatctt	Protospacer
 ** ******** *************** . ...

307. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP028885 (Borrelia turcica IST7 plasmid lp129, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcgtcttcttcctcttcttcatctttctctatct	Protospacer
.** ***************** ****.. .. **

308. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP041249 (Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.714

---ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
atcctcttcttcttcttcttcttcttcttcttctt---	Protospacer
   ***.********.********.****** ...

309. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
gtcctcttcgtcctcttcttcttcttcttcttctt	Protospacer
 ******** ***********.****** .....

310. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 10, identity: 0.714

---ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
gtcctcttcttcttcttcttcttcttcttcttctt---	Protospacer
   ***.********.********.****** ...

311. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
gtcttcttcttcctcttcctcctcttcgagatccc	Protospacer
 **.**************.******** .  ..*

312. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_018986 (Borrelia burgdorferi 297 plasmid 297_lp36, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
atcctcttcatcctcttcatcctcttcatcctctt	Protospacer
 ******** ******** ********  .*...

313. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_018986 (Borrelia burgdorferi 297 plasmid 297_lp36, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcatcctcttcatcctcttcatcctctt	Protospacer
.******** ******** ********  .*...

314. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcatcttcatcttcaataagtt	Protospacer
.************** ***** ***** .*   .

315. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcatcttcatcttcaataagtt	Protospacer
.************** ***** ***** .*   .

316. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcatcttcatcttcaataagtt	Protospacer
.************** ***** ***** .*   .

317. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcatcttcatcttcaataagtt	Protospacer
.************** ***** ***** .*   .

318. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcatcttcatcttcaataagtt	Protospacer
.************** ***** ***** .*   .

319. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcatcttcatcttcaataagtt	Protospacer
.************** ***** ***** .*   .

320. spacer 5.7|3676594|35|NC_013592|CRT matches to KC595513 (Bacillus phage Shanette, complete genome) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttaatcttcttcctcttcatcctcttcagtatgac	Protospacer
.*  ************** ******** ** .

321. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_011421 (Bacillus phage SPO1, complete genome) position: , mismatch: 10, identity: 0.714

---ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcctcttcctcctcttcctcttcatctgaag---	Protospacer
   *********.********.**.** ****

322. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_028982 (Bacillus phage JL, complete genome) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttgatcttcttcctcttcatcctcttcagtatgac	Protospacer
.*  ************** ******** ** .

323. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcatcttcatcttcaataagtt	Protospacer
.************** ***** ***** .*   .

324. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcctcttcttcctcatcttcatcttcaataagtt	Protospacer
.************** ***** ***** .*   .

325. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_048106 (Synechococcus phage S-CBWM1, complete genome) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
gacctcttcctcctcttcctcctcttcctccacaa	Protospacer
  *******.********.********. .* . *

326. spacer 5.7|3676594|35|NC_013592|CRT matches to MN693609 (Marine virus AFVG_250M479, complete genome) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
gtcatcttcttcctcttcttcctgtttataggcca	Protospacer
 ** ******************* **.     .**

327. spacer 5.7|3676594|35|NC_013592|CRT matches to MT135025 (Vibrio phage V07, complete genome) position: , mismatch: 10, identity: 0.714

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
tttttcttcttccgcttcttcctcttgtgcttcaa	Protospacer
.*..********* ************ **.... *

328. spacer 8.6|3921537|32|NC_013592|CRISPRCasFinder,CRT matches to NC_019765 (Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence) position: , mismatch: 10, identity: 0.688

aattcggtcattggttttgccttatttcttga	CRISPR spacer
ttatttatcattggttttgccttaattgtttg	Protospacer
   *. .***************** ** ** .

329. spacer 8.11|3921837|32|NC_013592|CRISPRCasFinder,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaatcattttcggcgcgcaggcgcttattct	CRISPR spacer
acctgcattttcggcccgcaggcacttatcgg	Protospacer
     ********** *******.*****.

330. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_CP010616 (Phaeobacter inhibens strain P92 plasmid pP92_f, complete sequence) position: , mismatch: 10, identity: 0.688

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
tgcagagcgcgccgggtgttctccccgtaaat	Protospacer
.. . .************ *** ****** *.

331. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_LN832560 (Paracoccus aminovorans isolate JCM7685 plasmid II, complete sequence) position: , mismatch: 10, identity: 0.688

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
gcgccggcgcggcgggtgatcagcccgcgctg	Protospacer
  * ******* ********* *****...

332. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_CP010635 (Phaeobacter inhibens strain P78 plasmid pP78_f, complete sequence) position: , mismatch: 10, identity: 0.688

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
tgcagagcgcgccgggtgttctccccgtaaat	Protospacer
.. . .************ *** ****** *.

333. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 10, identity: 0.688

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
gtgccggcgcgctgggtgatcagcccggccct	Protospacer
  * ********.******** *****  . .

334. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 10, identity: 0.688

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
gtgccggcgcgctgggtgatcagcccggccct	Protospacer
  * ********.******** *****  . .

335. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_CP010755 (Phaeobacter inhibens strain P70 plasmid pP70_f, complete sequence) position: , mismatch: 10, identity: 0.688

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
tgcagagcgcgccgggtgttctccccgtaaat	Protospacer
.. . .************ *** ****** *.

336. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_CP010713 (Phaeobacter inhibens strain P66 plasmid pP66_h, complete sequence) position: , mismatch: 10, identity: 0.688

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
tgcagagcgcgccgggtgttctccccgtaaat	Protospacer
.. . .************ *** ****** *.

337. spacer 8.17|3922198|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_CP010740 (Phaeobacter inhibens strain P72 plasmid pP72_e, complete sequence) position: , mismatch: 10, identity: 0.688

caggcggcgcgccgggtgatctgcccgtatac	CRISPR spacer
tgcagagcgcgccgggtgttctccccgtaaat	Protospacer
.. . .************ *** ****** *.

338. spacer 9.13|3932060|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MN850617 (Escherichia phage forsur, complete genome) position: , mismatch: 10, identity: 0.688

aataaggcgtaccgcctgcgcgtgcttgatcg	CRISPR spacer
cgcccggcgtaccgcctgcacctgcttggttc	Protospacer
 ..  **************.* ******.*.

339. spacer 9.13|3932060|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to MN850624 (Escherichia phage usur, complete genome) position: , mismatch: 10, identity: 0.688

aataaggcgtaccgcctgcgcgtgcttgatcg	CRISPR spacer
cgcccggcgtaccgcctgcacctgcttggttc	Protospacer
 ..  **************.* ******.*.

340. spacer 9.19|3932420|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015616 (Acinetobacter schindleri strain ACE plasmid p1AsACE, complete sequence) position: , mismatch: 10, identity: 0.688

gacacacaccggcatgttgttcatcgagtcaa	CRISPR spacer
tcagcacacgggcatgttgttcagcgatgaga	Protospacer
   .***** ************* ***   .*

341. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

342. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

343. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

344. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

345. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

346. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

347. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

348. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

349. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

350. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

351. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

352. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

353. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

354. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

355. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

356. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

357. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

358. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

359. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

360. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

361. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

362. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

363. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

364. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

365. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

366. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

367. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

368. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

369. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

370. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

371. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

372. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

373. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

374. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

375. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

376. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

377. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

378. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

379. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

380. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

381. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

382. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

383. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

384. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

385. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

386. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

387. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

388. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

389. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

390. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

391. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

392. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

393. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

394. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

395. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

396. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

397. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagagacac	Protospacer
    .******** *** ***********.

398. spacer 9.24|3932720|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039696 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK21, complete sequence) position: , mismatch: 10, identity: 0.688

ggcgcgcacggtatgaccgggcaatgcaggct	CRISPR spacer
atcgcgcagggcatgaccgggcaatgtctttc	Protospacer
. ****** **.**************.   ..

399. spacer 4.1|3674346|47|NC_013592|CRT matches to NZ_CP015111 (Acinetobacter sp. TGL-Y2 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.766

ttcaccttcgcgtccagcgtcacacgcattaacgtccgtacggacgt	CRISPR spacer
ttcaccttcgcgtccagcatcacatgcattaacgacttcggtaacat	Protospacer
******************.*****.********* *. ..  .**.*

400. spacer 4.5|3674347|47|NC_013592|CRISPRCasFinder matches to NZ_CP015111 (Acinetobacter sp. TGL-Y2 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.766

tcaccttcgcgtccagcgtcacacgcattaacgtccgtacggacgtt	CRISPR spacer
tcaccttcgcgtccagcatcacatgcattaacgacttcggtaacatt	Protospacer
*****************.*****.********* *. ..  .**.**

401. spacer 5.7|3676594|35|NC_013592|CRT matches to MN694145 (Marine virus AFVG_250M840, complete genome) position: , mismatch: 11, identity: 0.686

---ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ttcttcttcttcttcttcttcctcttcttctggtt---	Protospacer
   .**.********.*****.**.******* ..

402. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP013192 (Escherichia coli strain FORC_031 plasmid pFORC31.2, complete sequence) position: , mismatch: 11, identity: 0.686

ctcctcttcttcctcttcttcctcttctgtcctca---	CRISPR spacer
---ttcttcttcttcttcttcttcctctttccgttcgt	Protospacer
   .********.********.**.*** *** .

403. spacer 5.7|3676594|35|NC_013592|CRT matches to NC_020909 (Octadecabacter arcticus 238 plasmid pOA238_118, complete sequence) position: , mismatch: 11, identity: 0.686

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
acattcttcgtcctcttcttcttcttctgctgcta	Protospacer
 . .***** ***********.*******.. ..*

404. spacer 5.7|3676594|35|NC_013592|CRT matches to MH248138 (Erwinia phage vB_EamM_Alexandra, complete genome) position: , mismatch: 11, identity: 0.686

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
ggattcatcttcctcttcttcctcgtctgctccgt	Protospacer
   .** ***************** ****..*.

405. spacer 8.9|3921717|32|NC_013592|CRISPRCasFinder,CRT matches to NZ_AP015031 (Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence) position: , mismatch: 11, identity: 0.656

gtgtgcgccagccggacaatcacattttcaat	CRISPR spacer
cacccagccatccggacaatctcattttccca	Protospacer
   .  **** ********** *******

406. spacer 9.23|3932660|32|NC_013592|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

gttcaccgctacgtttttccggccagagatca	CRISPR spacer
tggggccgctacggtttgccggccagaggcac	Protospacer
    .******** *** **********..

407. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 12, identity: 0.657

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
actatcttcttcatcttcttcatcttctgatacat	Protospacer
 .. ******** ******** ******* . .

408. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP014218 (Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence) position: , mismatch: 12, identity: 0.657

---ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
aggctctttttcttcttcttcctcttctttaggct---	Protospacer
   ***.*.******.*****.**.****. * *.

409. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP014147 (Clostridium botulinum strain CDC_67190 plasmid pNPD12_2, complete sequence) position: , mismatch: 12, identity: 0.657

---ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
aggctctttttcttcttcttcctcttctttaggct---	Protospacer
   ***.*.******.*****.**.****. * *.

410. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 12, identity: 0.657

ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
actatcttcttcatcttcttcatcttctgatacat	Protospacer
 .. ******** ******** ******* . .

411. spacer 5.7|3676594|35|NC_013592|CRT matches to NZ_CP031100 (Clostridium botulinum strain CFSAN034202 plasmid p1_CFSAN034202, complete sequence) position: , mismatch: 13, identity: 0.629

---ctcctcttcttcctcttcttcctcttctgtcctca	CRISPR spacer
aggctctttttcttcttcttcctcttctttagggt---	Protospacer
   ***.*.******.*****.**.****. *  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

722019 : 729394

Escherichia_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012883387.1\|722019_723087_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.1e-100	52.7
WP_012883388.1\|723086_723950_+	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	1.2e-108	67.4
WP_012883389.1\|724211_724763_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.1e-46	53.1
WP_041164267.1\|724938_726327_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	3.7e-51	29.9
WP_012883391.1\|726342_727704_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	3.6e-35	28.5
WP_071818942.1\|727809_728637_+	ABC transporter permease	NA	NA	NA	NA
WP_095522548.1\|728638_729394_+	ABC transporter ATP-binding protein	A7IVC2	Paramecium_bursaria_Chlorella_virus	3.6e-08	28.2

DBSCAN-SWA_2

811892 : 846943

Cronobacter_phage(78.57%)

terminase,transposase,capsid,head,portal,integrase,tail,holin

attL 818289:818332|attR 848156:848199

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012883459.1\|811892_813137_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_012883460.1\|813654_815706_-	acyltransferase	C6ZR20	Salmonella_phage	1.5e-45	28.8
818289:818332	attL	NA	NA	NA	NA
WP_012883462.1\|818381_819473_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	3.5e-158	75.5
WP_012883463.1\|819600_820248_-	hypothetical protein	NA	NA	NA	NA
WP_012883464.1\|820248_821283_-	hypothetical protein	NA	NA	NA	NA
WP_012883465.1\|821537_822101_-	hypothetical protein	F1BUN8	Cronobacter_phage	2.8e-34	39.6
WP_012883466.1\|822230_822452_+	hypothetical protein	NA	NA	NA	NA
WP_012883467.1\|822484_822994_+	phage regulatory CII family protein	A0A0M4QWN1	Salmonella_phage	4.5e-47	54.5
WP_012883468.1\|823090_823246_+	hypothetical protein	NA	NA	NA	NA
WP_012883469.1\|823258_823588_+	hypothetical protein	NA	NA	NA	NA
WP_012883470.1\|823659_823890_+	DUF2732 domain-containing protein	NA	NA	NA	NA
WP_012883471.1\|823889_824213_+	DUF5405 family protein	NA	NA	NA	NA
WP_012883472.1\|824209_826255_+	replication endonuclease	F1BUM9	Cronobacter_phage	7.2e-237	62.1
WP_012883473.1\|826294_826495_-	hypothetical protein	NA	NA	NA	NA
WP_012883474.1\|826783_826939_+	hypothetical protein	NA	NA	NA	NA
WP_041164277.1\|826945_827266_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	7.1e-43	79.6
WP_012883476.1\|827265_828294_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	8.8e-159	79.9
WP_012883477.1\|828290_830066_-	hypothetical protein	F1BUM5	Cronobacter_phage	8.0e-269	76.0
WP_041164278.1\|830216_831059_+\|capsid	phage capsid scaffolding protein	F1BUM4	Cronobacter_phage	5.5e-58	58.6
WP_012883479.1\|831113_832145_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.7e-154	82.0
WP_012883480.1\|832148_832850_+\|terminase	terminase	F1BUM0	Cronobacter_phage	4.7e-71	59.5
WP_049779751.1\|832946_833399_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	9.7e-54	70.7
WP_012883482.1\|833395_833893_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	1.9e-34	43.8
WP_012883483.1\|833889_834594_+	hypothetical protein	F1BUL6	Cronobacter_phage	2.3e-86	69.7
WP_012883484.1\|834596_835712_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	3.4e-140	67.7
WP_012883485.1\|835708_836164_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	4.1e-52	64.9
WP_012883486.1\|836172_836478_+\|holin	holin	C7BGD7	Burkholderia_phage	1.3e-17	55.3
WP_012883487.1\|836464_836806_+	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	1.1e-44	83.2
WP_012883488.1\|836805_837162_+	hypothetical protein	F1BUL2	Cronobacter_phage	5.4e-23	57.5
WP_012883490.1\|837294_837552_+	hypothetical protein	A5X9I7	Aeromonas_virus	8.9e-20	60.5
WP_012883492.1\|837739_839704_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	2.2e-190	51.5
WP_012883493.1\|839703_840033_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	7.4e-35	66.3
WP_012883494.1\|840029_841214_+	hypothetical protein	F1BUK6	Cronobacter_phage	1.8e-155	69.0
WP_012883495.1\|841206_841839_+	hypothetical protein	F1BUK5	Cronobacter_phage	4.1e-58	61.9
WP_012883497.1\|843451_844072_+\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	7.9e-38	40.5
WP_012883498.1\|844068_844794_+	hypothetical protein	F1BUK1	Cronobacter_phage	2.3e-41	40.3
WP_012883499.1\|844765_845287_+	hypothetical protein	F1BUJ9	Cronobacter_phage	4.4e-50	58.8
WP_012883500.1\|845290_846943_+	hypothetical protein	F1BUJ7	Cronobacter_phage	5.9e-173	58.4
848156:848199	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1394121 : 1402139

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012883970.1\|1394121_1395549_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.3e-54	30.8
WP_012883971.1\|1395563_1396937_+	phosphomannomutase CpsG	A0A127AWJ1	Bacillus_phage	4.2e-31	27.1
WP_012883972.1\|1397042_1398050_+	NAD-dependent epimerase	A0A0K0KW07	Prochlorococcus_phage	9.6e-09	27.1
WP_012883973.1\|1398284_1399451_+	nucleotide sugar dehydrogenase	O41091	Paramecium_bursaria_Chlorella_virus	5.7e-114	55.8
WP_012883974.1\|1399537_1400437_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	2.0e-50	42.7
WP_012883975.1\|1400732_1402139_+	NADP-dependent phosphogluconate dehydrogenase	A0A1D7RI04	Synechococcus_phage	2.1e-30	30.2

DBSCAN-SWA_4

1963104 : 2079014

Escherichia_phage(27.27%)

protease,plate,tail,tRNA,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012884424.1\|1963104_1964046_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.4e-139	92.2
WP_041164379.1\|1964365_1965817_-	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	S5M9Y4	Brevibacillus_phage	2.1e-09	35.4
WP_012884426.1\|1966708_1967206_+	hypothetical protein	NA	NA	NA	NA
WP_012884427.1\|1967328_1969353_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_012884428.1\|1969670_1969961_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_012884429.1\|1970020_1971013_-	2-hydroxyacid dehydrogenase	M1HUT5	Acanthocystis_turfacea_Chlorella_virus	3.8e-66	42.5
WP_012884430.1\|1971234_1972788_-	PAS domain-containing protein	A0A1B0V854	Salmonella_phage	6.2e-39	54.4
WP_012884431.1\|1973093_1975697_+	YdbH family protein	NA	NA	NA	NA
WP_012884432.1\|1975723_1975936_+	YnbE family lipoprotein	NA	NA	NA	NA
WP_012884433.1\|1976260_1977433_+	acyltransferase	NA	NA	NA	NA
WP_012884434.1\|1977635_1978241_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_012884435.1\|1978603_1982491_+	ATP-dependent RNA helicase HrpA	A0A1V0SBU4	Catovirus	1.3e-53	26.6
WP_041164884.1\|1982601_1983297_-	lactate utilization protein C	NA	NA	NA	NA
WP_012884437.1\|1983296_1984718_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_012884438.1\|1984729_1985449_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_012884439.1\|1985566_1987117_-	L-lactate permease	NA	NA	NA	NA
WP_012884440.1\|1987401_1988220_-\|protease	serine protease	NA	NA	NA	NA
WP_012884442.1\|1989464_1990820_-	two-component system sensor histidine kinase RstB	NA	NA	NA	NA
WP_012884443.1\|1990816_1991560_-	two-component system response regulator RstA	NA	NA	NA	NA
WP_012884444.1\|1991786_1992230_+	hypothetical protein	NA	NA	NA	NA
WP_041164889.1\|1992294_1994010_-	C4-dicarboxylic acid transporter DauA	A0A2H4J153	uncultured_Caudovirales_phage	5.6e-25	24.1
WP_012884446.1\|1994280_1995381_-	sodium-potassium/proton antiporter ChaA	NA	NA	NA	NA
WP_012884447.1\|1996224_1996917_+	transporter	NA	NA	NA	NA
WP_012884448.1\|1997093_1998134_+	ABC transporter permease	NA	NA	NA	NA
WP_012884449.1\|1998130_1998991_+	ABC transporter permease	NA	NA	NA	NA
WP_012884450.1\|1998977_1999820_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_041164891.1\|1999831_2000503_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.2e-17	27.4
WP_012884452.1\|2000581_2002162_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012884453.1\|2002213_2003500_-	chloride channel protein	NA	NA	NA	NA
WP_041164384.1\|2003635_2004334_+	serine/threonine protein phosphatase	M9P0E4	Enterobacteria_phage	1.6e-71	56.5
WP_157668895.1\|2004488_2004674_-	hypothetical protein	NA	NA	NA	NA
WP_012884455.1\|2004772_2005072_+	hypothetical protein	NA	NA	NA	NA
WP_012884456.1\|2005194_2006742_-	PAS domain-containing protein	A0A1B0V854	Salmonella_phage	1.1e-35	53.8
WP_012884457.1\|2007466_2008699_+	exopolysaccharide inner membrane protein	NA	NA	NA	NA
WP_012884458.1\|2008843_2010532_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_012884459.1\|2010813_2012628_-	diguanylate cyclase	NA	NA	NA	NA
WP_012884460.1\|2012850_2014155_-	guanine deaminase	NA	NA	NA	NA
WP_012769529.1\|2014544_2014736_-	transcriptional activator Ogr/delta	A0A2I8TV89	Erwinia_phage	6.8e-17	66.7
WP_012884461.1\|2014832_2016008_-	late control D family protein	Q6K1G4	Salmonella_virus	1.6e-76	43.3
WP_038927221.1\|2016004_2016499_-\|tail	phage tail protein	Q6K1G5	Salmonella_virus	1.2e-41	58.0
WP_012884462.1\|2016509_2017598_-	hypothetical protein	NA	NA	NA	NA
WP_012769533.1\|2017590_2017710_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	6.5e-10	77.1
WP_012884463.1\|2017742_2018033_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	4.8e-22	58.4
WP_012884464.1\|2018093_2018612_-\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	1.4e-75	76.7
WP_012884465.1\|2018626_2019796_-\|tail	phage tail sheath protein	S4TRX2	Salmonella_phage	1.0e-187	83.2
WP_012884466.1\|2020022_2020634_-\|tail	tail assembly protein	H9C0Y3	Aeromonas_phage	9.9e-17	31.5
WP_012884467.1\|2020636_2021233_-\|tail	tail fiber protein	M1TAS6	Escherichia_phage	6.2e-32	51.3
WP_012884468.1\|2021394_2021976_-	recombinase family protein	A0A286S1P7	Klebsiella_phage	1.3e-74	76.2
WP_012884470.1\|2022752_2024108_+	esterase-like activity of phytase family protein	NA	NA	NA	NA
WP_012884471.1\|2024260_2025607_+	aromatic acid/H+ symport family MFS transporter	NA	NA	NA	NA
WP_012884472.1\|2025695_2026262_-	DNA endonuclease SmrA	NA	NA	NA	NA
WP_012884473.1\|2026415_2027621_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	1.2e-103	44.5
WP_012884474.1\|2027849_2028461_-\|tail	phage tail protein I	F1BUP2	Erwinia_phage	2.7e-75	64.6
WP_012884475.1\|2028453_2029362_-\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	2.2e-121	74.8
WP_012884476.1\|2029366_2029717_-\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	9.3e-36	62.9
WP_012884477.1\|2029713_2030367_-\|plate	phage baseplate assembly protein V	S4TUB5	Salmonella_phage	5.5e-74	66.8
WP_012884478.1\|2030694_2031156_-\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	4.7e-27	45.1
WP_012884479.1\|2031198_2031402_-\|tail	tail protein X	A0A218M4L8	Erwinia_phage	8.3e-21	65.7
WP_012884482.1\|2032095_2032317_-	hypothetical protein	NA	NA	NA	NA
WP_012884483.1\|2032380_2034504_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	7.1e-171	46.0
WP_012884484.1\|2034600_2034825_-	TraR/DksA family transcriptional regulator	Q6K1F5	Salmonella_virus	2.9e-14	52.1
WP_012884485.1\|2034824_2035040_-	DUF2732 family protein	NA	NA	NA	NA
WP_012884486.1\|2035162_2035675_-	hypothetical protein	A0A0F7LBQ6	Escherichia_phage	1.0e-35	46.6
WP_012884487.1\|2035671_2036154_-	hypothetical protein	NA	NA	NA	NA
WP_019845996.1\|2036278_2037121_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	5.2e-85	55.0
WP_012884489.1\|2037775_2039785_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_012769560.1\|2040003_2040195_-	YebW family protein	NA	NA	NA	NA
WP_012884490.1\|2040304_2041753_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_012884491.1\|2041858_2044489_-	PqiB family protein	NA	NA	NA	NA
WP_012884492.1\|2044504_2045776_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_041164896.1\|2046078_2046585_+	GAF domain-containing protein	NA	NA	NA	NA
WP_012884494.1\|2046669_2047392_+	RNA chaperone ProQ	NA	NA	NA	NA
WP_012884495.1\|2047411_2049433_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	6.0e-87	34.4
WP_012884496.1\|2049561_2050617_-	DUF481 domain-containing protein	NA	NA	NA	NA
WP_012884497.1\|2050846_2052127_-	acyltransferase	NA	NA	NA	NA
WP_012884498.1\|2052400_2053048_-	two-component system response regulator NarL	NA	NA	NA	NA
WP_012884499.1\|2053040_2054849_-	nitrate/nitrite two-component system sensor histidine kinase NarX	NA	NA	NA	NA
WP_012884500.1\|2055288_2056680_+	NarK family nitrate/nitrite MFS transporter	NA	NA	NA	NA
WP_041164388.1\|2056789_2057809_-	CAR family subclass B3 metallo-beta-lactamase	NA	NA	NA	NA
WP_012884502.1\|2057913_2058804_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012884503.1\|2059137_2062908_+	nitrate reductase subunit alpha	NA	NA	NA	NA
WP_012884504.1\|2062907_2064467_+	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	1.1e-19	40.5
WP_012884505.1\|2064463_2065183_+	nitrate reductase molybdenum cofactor assembly chaperone	NA	NA	NA	NA
WP_012884506.1\|2065182_2065860_+	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA
WP_012884507.1\|2066319_2067468_+	L-threonine dehydrogenase	NA	NA	NA	NA
WP_012884508.1\|2068020_2069046_+	HoxN/HupN/NixA family nickel/cobalt transporter	NA	NA	NA	NA
WP_012884509.1\|2069459_2069918_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012884510.1\|2069979_2070216_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_012884511.1\|2070544_2071027_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	1.1e-23	40.7
WP_012884512.1\|2072102_2073284_+	hypothetical protein	NA	NA	NA	NA
WP_012884513.1\|2073342_2073957_+	CDP-alcohol phosphatidyltransferase	NA	NA	NA	NA
WP_012884514.1\|2073969_2075268_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_012884515.1\|2075330_2077676_+	pyruvate phosphate dikinase PEP/pyruvate-binding protein	NA	NA	NA	NA
WP_012884516.1\|2077672_2078287_+	C26 family cysteine hydrolase domain-containing family	NA	NA	NA	NA
WP_012884517.1\|2078288_2079014_+\|holin	phosphocholine cytidylyltransferase family protein	NA	NA	NA	NA

DBSCAN-SWA_5

2203668 : 2213352

Tupanvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012884622.1\|2203668_2205597_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	8.8e-128	36.9
WP_012884623.1\|2205600_2206143_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	7.4e-16	32.5
WP_012769670.1\|2206239_2206437_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_012769671.1\|2206480_2206837_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_146214201.1\|2206986_2207055_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_012884624.1\|2207246_2208230_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	2.9e-34	38.5
WP_012884625.1\|2208245_2210633_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	1.8e-05	25.8
WP_012769674.1\|2210636_2210936_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
WP_012884626.1\|2211059_2211407_-	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA
WP_041164918.1\|2211481_2212381_-	drug/metabolite DMT transporter permease	NA	NA	NA	NA
WP_012884628.1\|2212527_2213352_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	2.7e-70	53.8

DBSCAN-SWA_6

2331670 : 2400719

Burkholderia_phage(22.22%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012884725.1\|2331670_2333104_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_012884726.1\|2333410_2333722_+\|protease	AprI/Inh family metalloprotease inhibitor	NA	NA	NA	NA
WP_012884727.1\|2333738_2335472_+	type I secretion system permease/ATPase	F2Y1V5	Organic_Lake_phycodnavirus	1.3e-13	27.5
WP_012884728.1\|2335485_2336832_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_012884729.1\|2336844_2338233_+	TolC family outer membrane protein	NA	NA	NA	NA
WP_167316309.1\|2338420_2339845_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_012884731.1\|2339995_2341438_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_012884732.1\|2341852_2343289_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_012884733.1\|2343529_2345398_-	potassium transporter Kup	M1I6H8	Paramecium_bursaria_Chlorella_virus	1.5e-71	31.4
WP_041164926.1\|2345641_2346337_-	Expansin-YoaJ	NA	NA	NA	NA
WP_012884735.1\|2346631_2347600_-	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_012884736.1\|2348466_2349471_+	acyltransferase family protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	4.4e-14	26.2
WP_012884737.1\|2349572_2349917_+	hypothetical protein	NA	NA	NA	NA
WP_041164928.1\|2350055_2350481_+	hypothetical protein	NA	NA	NA	NA
WP_012884739.1\|2350486_2351047_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_012884740.1\|2351053_2351965_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012884741.1\|2351977_2352967_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_012884745.1\|2355124_2355958_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_012884746.1\|2355977_2357204_+	glycosyl transferase	NA	NA	NA	NA
WP_012884747.1\|2357221_2357992_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_012884748.1\|2358363_2359113_+	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
WP_012884749.1\|2359410_2359767_+	DUF1283 family protein	NA	NA	NA	NA
WP_012884750.1\|2359834_2360086_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_012884751.1\|2360273_2360945_-	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_012884752.1\|2361091_2362309_-	ROK family transcriptional regulator	NA	NA	NA	NA
WP_012884753.1\|2362425_2363340_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_041164416.1\|2363477_2364722_+	MFS transporter	S4TR35	Salmonella_phage	5.0e-07	27.2
WP_041164930.1\|2364888_2365815_+	DNA replication terminus site-binding protein	NA	NA	NA	NA
WP_012884756.1\|2365818_2367216_-	class II fumarate hydratase	NA	NA	NA	NA
WP_012884757.1\|2367393_2368578_+	mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_012884758.1\|2368634_2370188_+	YdgA family protein	NA	NA	NA	NA
WP_012884759.1\|2370501_2371515_+	adenosine deaminase	NA	NA	NA	NA
WP_012884760.1\|2371619_2372078_-	SgcJ/EcaC family oxidoreductase	NA	NA	NA	NA
WP_012884761.1\|2372243_2373239_-	bile acid:sodium symporter	NA	NA	NA	NA
WP_012884762.1\|2373392_2374442_-	oxidoreductase	NA	NA	NA	NA
WP_012884763.1\|2374681_2375635_-	arabinose operon transcriptional regulator AraC	NA	NA	NA	NA
WP_012884764.1\|2375705_2376692_-	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_012884765.1\|2376710_2378234_-	L-arabinose ABC transporter ATP-binding protein AraG	A0A2H4PQG7	Staphylococcus_phage	1.0e-14	29.0
WP_012884766.1\|2378322_2379306_-	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012884767.1\|2379688_2381374_+	ribulokinase	NA	NA	NA	NA
WP_012884768.1\|2381428_2382940_+	L-arabinose isomerase	NA	NA	NA	NA
WP_012884769.1\|2383087_2384800_-	rhamnogalacturonate lyase	NA	NA	NA	NA
WP_012884770.1\|2385635_2385851_+	transcription modulator YdgT	NA	NA	NA	NA
WP_012884771.1\|2386236_2386818_+	electron transport complex subunit RsxA	NA	NA	NA	NA
WP_012884772.1\|2386817_2387408_+	electron transport complex subunit RsxB	NA	NA	NA	NA
WP_012884773.1\|2387400_2389680_+	electron transport complex subunit RsxC	NA	NA	NA	NA
WP_012884774.1\|2389680_2390733_+	electron transport complex subunit RsxD	NA	NA	NA	NA
WP_041164932.1\|2390745_2391372_+	electron transport complex subunit RsxG	NA	NA	NA	NA
WP_012884776.1\|2391371_2392067_+	electron transport complex subunit E	NA	NA	NA	NA
WP_012884777.1\|2392068_2392704_+	endonuclease III	NA	NA	NA	NA
WP_012884778.1\|2392828_2393803_-	HTH-type transcriptional regulator CysB	NA	NA	NA	NA
WP_012884779.1\|2394143_2396765_-	type I DNA topoisomerase	A0A2K9L5F8	Tupanvirus	2.3e-86	34.3
WP_012884780.1\|2397205_2397475_+	YciN family protein	NA	NA	NA	NA
WP_012884781.1\|2397869_2398463_+	YolA family protein	I6NTM5	Burkholderia_phage	5.4e-44	55.3
WP_012884782.1\|2398754_2399243_-	hypothetical protein	I6NP90	Burkholderia_phage	9.7e-07	33.1
WP_012884783.1\|2399672_2400719_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	2.4e-18	27.4

DBSCAN-SWA_7

4295448 : 4304363

uncultured_Caudovirales_phage(33.33%)

integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016942972.1\|4295448_4296672_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	3.3e-27	27.2
WP_012886371.1\|4296805_4297381_-	aminodeoxychorismate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.0e-72	64.1
WP_012886372.1\|4297553_4297817_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012886373.1\|4297929_4298196_+	transcriptional regulator	A0A2I7S995	Vibrio_phage	9.5e-17	65.1
WP_012886374.1\|4298420_4300466_-	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	4.3e-117	58.9
WP_012886375.1\|4300458_4300995_-	ash family protein	NA	NA	NA	NA
WP_012886376.1\|4300991_4301195_-	AlpA family transcriptional regulator	A0A2H4J8C8	uncultured_Caudovirales_phage	8.0e-08	50.0
WP_012886377.1\|4301194_4302076_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_038909166.1\|4303247_4304363_+	ParB N-terminal domain-containing protein	Q7Y4B3	Escherichia_virus	5.1e-19	25.8

DBSCAN-SWA_8

4506076 : 4565707

Erwinia_phage(38.46%)

tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012767897.1\|4506076_4506607_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_012886538.1\|4506616_4507948_+	HslU--HslV peptidase ATPase subunit	A0A173GFL6	Erwinia_phage	3.4e-46	29.0
WP_012886539.1\|4508120_4509038_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_012886540.1\|4509202_4509688_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_012886541.1\|4509755_4509998_-	cell division protein ZapB	NA	NA	NA	NA
WP_012886542.1\|4510598_4511450_+	aquaporin family protein	M1HWZ0	Paramecium_bursaria_Chlorella_virus	4.9e-14	28.5
WP_012886543.1\|4511477_4512989_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_012886544.1\|4513134_4514145_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_012886545.1\|4514269_4515016_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_012886546.1\|4515072_4515498_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_012886547.1\|4515643_4516240_+	YiiQ family protein	NA	NA	NA	NA
WP_012886548.1\|4516381_4517152_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_038909280.1\|4517304_4518729_+	alkaline phosphatase	NA	NA	NA	NA
WP_012886550.1\|4518791_4519172_-	hypothetical protein	NA	NA	NA	NA
WP_157668929.1\|4519412_4519661_-	hypothetical protein	NA	NA	NA	NA
WP_012886552.1\|4519983_4520526_+	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	6.7e-41	44.9
WP_157668909.1\|4520730_4521339_-	hypothetical protein	NA	NA	NA	NA
WP_012886554.1\|4521502_4521946_-	hypothetical protein	NA	NA	NA	NA
WP_012886555.1\|4522136_4522466_-	hypothetical protein	NA	NA	NA	NA
WP_012886556.1\|4522801_4523128_-	hypothetical protein	NA	NA	NA	NA
WP_157668930.1\|4523416_4523818_-	hypothetical protein	NA	NA	NA	NA
WP_012886559.1\|4524895_4525450_-	hypothetical protein	NA	NA	NA	NA
WP_041164675.1\|4525560_4525776_-	hypothetical protein	NA	NA	NA	NA
WP_012886561.1\|4526028_4526376_-	hypothetical protein	NA	NA	NA	NA
WP_012886562.1\|4526537_4526759_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
WP_012886563.1\|4526805_4527303_-	hypothetical protein	NA	NA	NA	NA
WP_041164677.1\|4527410_4527686_-	hypothetical protein	NA	NA	NA	NA
WP_012886565.1\|4528506_4528956_-	hypothetical protein	NA	NA	NA	NA
WP_012886566.1\|4531808_4532141_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012886567.1\|4532148_4532406_-	transcriptional regulator	A0A0C4UQU0	Shigella_phage	2.1e-13	53.8
WP_012886568.1\|4532504_4532825_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_157668931.1\|4533124_4533571_-	hypothetical protein	NA	NA	NA	NA
WP_012886571.1\|4533988_4534336_-	hypothetical protein	NA	NA	NA	NA
WP_012886572.1\|4534338_4537599_-	hypothetical protein	NA	NA	NA	NA
WP_012886573.1\|4537641_4537899_-	hypothetical protein	NA	NA	NA	NA
WP_167316317.1\|4537885_4538668_-	hypothetical protein	NA	NA	NA	NA
WP_157668910.1\|4539169_4539589_-	hypothetical protein	NA	NA	NA	NA
WP_012886575.1\|4540127_4540577_-	hypothetical protein	NA	NA	NA	NA
WP_167316318.1\|4540579_4541197_-	filamentous hemagglutinin	NA	NA	NA	NA
WP_012886577.1\|4549144_4549681_-	toxin-activating lysine-acyltransferase	NA	NA	NA	NA
WP_012886578.1\|4549693_4551424_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_012886579.1\|4551617_4552715_-	agmatine deiminase	M1I5R4	Acanthocystis_turfacea_Chlorella_virus	4.1e-98	49.6
WP_012886580.1\|4552718_4553603_-	N-carbamoylputrescine amidase	A7IVZ1	Paramecium_bursaria_Chlorella_virus	5.7e-82	51.2
WP_157668911.1\|4553734_4553905_-	hypothetical protein	NA	NA	NA	NA
WP_012886581.1\|4553906_4554869_-	6-phosphofructokinase	NA	NA	NA	NA
WP_012886582.1\|4555067_4555970_-	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
WP_012886583.1\|4556165_4556636_-	Pr2TM family membrane protein	NA	NA	NA	NA
WP_012886584.1\|4556838_4557318_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_012886585.1\|4557289_4557685_-\|tail	tail assembly protein	I7LEG3	Yersinia_phage	8.9e-11	36.0
WP_012886586.1\|4557681_4559040_-\|tail	tail protein	F1BUP1	Erwinia_phage	8.8e-74	54.7
WP_012886587.1\|4559323_4559944_-\|tail	tail fiber assembly protein	X2KPE1	Enterobacteria_phage	2.4e-18	33.0
WP_012886588.1\|4559943_4560939_-\|tail	tail protein	A0A2I8TVA9	Erwinia_phage	5.1e-95	52.4
WP_012886589.1\|4561190_4562345_-\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	3.6e-100	53.5
WP_012886590.1\|4562651_4563836_-\|tail	tail fiber protein	A0A2I8TVA9	Erwinia_phage	2.5e-85	48.1
WP_012886591.1\|4564222_4565707_-\|tail	tail collar domain-containing protein	M1TAS6	Escherichia_phage	3.3e-98	45.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_013592

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection