CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_013942	Escherichia coli O55:H7 str. CB9615 plasmid pO55, complete sequence	0 crisprs	NA	0	0	0	0
NC_013941	Escherichia coli O55:H7 str. CB9615, complete sequence	4 crisprs	DinG,cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	0	4	15	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_013941_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013941_1

71451-71585

Orphan

Consensus_repeat	Method
TGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013941_1

>merge|NC_013941|1|71451-71585|CRISPRCasFinder
TGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGCTGAATGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATTGCAGCGTGTAGGCC

>NC_013941|1|1|71451-71585|CRISPRCasFinder
TGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCC	AGATAAGACGCGTCAGCGTCGCATCAGGCGCTGAA
TGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATTGCAGCGTGTAGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_013941.1\|WP_001200587.1\|62309_63125_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NC_013941.1\|WP_001301693.1\|79271_80255_-\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
NC_013941.1\|WP_000525186.1\|64574_65234_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NC_013941.1\|WP_000746137.1\|59706_62055_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NC_013941.1\|WP_000800457.1\|58367_59654_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NC_013941.1\|WP_000888654.1\|70741_71437_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NC_013941.1\|WP_001148407.1\|76152_76917_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NC_013941.1\|WP_001138625.1\|81424_83083_-\|DNA-binding-transcriptional-regulator-SgrR	unknown	unknown	gnl\|CDD\|184188
NC_013941.1\|WP_001065380.1\|56560_57382_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NC_013941.1\|WP_001248768.1\|83171_83303_+\|glucose-uptake-inhibitor-SgrT	unknown	unknown	gnl\|CDD\|374203
NC_013941.1\|WP_000151715.1\|71636_73139_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NC_013941.1\|WP_000916267.1\|77003_77702_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
NC_013941.1\|WP_013009101.1\|63419_64157_+\|hypothetical-protein	unknown	unknown	unknown
NC_013941.1\|WP_000035704.1\|68315_70667_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NC_013941.1\|WP_001117011.1\|65245_68152_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NC_013941.1\|WP_000241259.1\|57378_58368_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NC_013941.1\|WP_001300811.1\|75188_76067_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NC_013941.1\|WP_000235664.1\|77685_79296_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	unknown	unknown	gnl\|CDD\|181853
NC_013941.1\|WP_000951872.1\|73149_74850_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NC_013941.1\|WP_000868321.1\|80626_81196_+\|T3SS-effector-EspY2	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_013941.1\|WP_001200587.1\|62309_63125_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.41841e-169
NC_013941.1\|WP_001301693.1\|79271_80255_-\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
NC_013941.1\|WP_000525186.1\|64574_65234_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	5.25024e-158
NC_013941.1\|WP_000800457.1\|58367_59654_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NC_013941.1\|WP_000888654.1\|70741_71437_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	3.528e-179
NC_013941.1\|WP_001148407.1\|76152_76917_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.79494e-49
NC_013941.1\|WP_001065380.1\|56560_57382_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.27697e-148
NC_013941.1\|WP_001248768.1\|83171_83303_+\|glucose-uptake-inhibitor-SgrT	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	0.00111324
NC_013941.1\|WP_000151715.1\|71636_73139_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NC_013941.1\|WP_000916267.1\|77003_77702_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	5.93317e-163
NC_013941.1\|WP_000746137.1\|59706_62055_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NC_013941.1\|WP_000035704.1\|68315_70667_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NC_013941.1\|WP_001117011.1\|65245_68152_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NC_013941.1\|WP_000241259.1\|57378_58368_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NC_013941.1\|WP_001300811.1\|75188_76067_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NC_013941.1\|WP_000235664.1\|77685_79296_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
NC_013941.1\|WP_000951872.1\|73149_74850_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NC_013941.1\|WP_001138625.1\|81424_83083_-\|DNA-binding-transcriptional-regulator-SgrR	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0

>NC_013941.1|WP_000888654.1|70741_71437_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSIMTADDMVVVSIETGEVVEGAKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>NC_013941.1|WP_000035704.1|68315_70667_-|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILRGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEANVRPPERYLMERFITSPVWVEGDMHNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLVSSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEATKIGRALVQHVNVWWAETLQKQQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>NC_013941.1|WP_001117011.1|65245_68152_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>NC_013941.1|WP_000525186.1|64574_65234_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFRERVPKKQYVTRVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
>NC_013941.1|WP_013009101.1|63419_64157_+|hypothetical-protein
MKVSVPGMPATLLNMSNNDIYKMVSGDKMDMKMNIFQRLWETLRHLFWSDKQTEAYKLLFNFVNKKAGNINASKYFTGAVNENEKEKFIHSLELFNELKTCAKNPDEMVAKGNMSWVAQTFGDIELSVTFFIENKEICTQTLQLHKGPGNLGVDLREAYLPGVDMRDCYLGLKTMKGHNKVLYLEPGWNANLDGATLDGAILDGATHLYDEVIIINKITPKKIDTEEVATKQSTAEQITDNAIIE
>NC_013941.1|WP_001200587.1|62309_63125_+|co-chaperone-DjlA
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMEWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>NC_013941.1|WP_000746137.1|59706_62055_-|LPS-assembly-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL
>NC_013941.1|WP_000800457.1|58367_59654_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN
>NC_013941.1|WP_000241259.1|57378_58368_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>NC_013941.1|WP_001065380.1|56560_57382_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPFQES
>NC_013941.1|WP_000151715.1|71636_73139_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVKALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAAEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR
>NC_013941.1|WP_000951872.1|73149_74850_-|ribulokinase
MAIAIGLDFGSDSVRALAVDCTTGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKEQIDASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
>NC_013941.1|WP_001300811.1|75188_76067_+|arabinose-operon-transcriptional-regulator-AraC
MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>NC_013941.1|WP_001148407.1|76152_76917_+|DedA-family-protein
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLVRHPLMPVYIDILRKVVGV
>NC_013941.1|WP_000916267.1|77003_77702_-|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGALTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAVQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELLSGKASASALLGITG
>NC_013941.1|WP_000235664.1|77685_79296_-|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGDWSAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVTALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTMLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKIPGRNVKTD
>NC_013941.1|WP_001301693.1|79271_80255_-|thiamine-ABC-transporter-substrate-binding-subunit
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDIFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR
>NC_013941.1|WP_000868321.1|80626_81196_+|T3SS-effector-EspY2
MKVRNPEQISIPASNTTKDPGLTNSQIIRMANLVKKTENMNIFEELWETLRNLFQSDKHSQTAARQILKDAFYFQNSDDYSKYFTGAVDGKARDKLTHWLIKFNELKEYAKDPENMAAKASLSPEGTLCVSFFIGDEAIFTLELQLKKSTRTGGIDLSNAYFNGVVICGIDCLEVDLSNAETNNSRWYD
>NC_013941.1|WP_001138625.1|81424_83083_-|DNA-binding-transcriptional-regulator-SgrR
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTITSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDPE
>NC_013941.1|WP_001248768.1|83171_83303_+|glucose-uptake-inhibitor-SgrT
MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEELMQWEGSHSDY

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Crispr_ID: NC_013941_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013941_2

3436173-3436386

TypeI-E

I-E

Consensus_repeat	Method
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

3 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NC_013941_2

>merge|NC_013941|2|3436173-3436386|CRISPRCasFinder,CRT,PILER-CR
CCCGGTTTATCCCCGCTGATGCGGGGAACACAGCGGCACGCTGGATTGAACAAATCCCTGGGCCGGTTTATCCCCGCTGGCGCGGGGAACACTTTATACACGGATCCTGTGTGCCGTGGACCGCCGGTTTATCCCCGCTGGCGCGGGGAACACCACAAACCGCCCATCTTCCCGATTACTGCAGCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_013941|2|2|3436173-3436386|CRISPRCasFinder
CCCGGTTTATCCCCGCTGATGCGGGGAACAC	AGCGGCACGCTGGATTGAACAAATCCCTGG
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTATACACGGATCCTGTGTGCCGTGGACC
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC	CACAAACCGCCCATCTTCCCGATTACTGCA
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_013941|2|1|3436173-3436386|CRT
CCCGGTTTATCCCCGCTGATGCGGGGAACAC	AGCGGCACGCTGGATTGAACAAATCCCTGG
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTATACACGGATCCTGTGTGCCGTGGACC
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC	CACAAACCGCCCATCTTCCCGATTACTGCA
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_013941|2|1|3436234-3436386|PILER-CR
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTATACACGGATCCTGTGTGCCGTGGACC
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC	CACAAACCGCCCATCTTCCCGATTACTGCA
GCCGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_013941.1\|WP_001219242.1\|3429775_3430255_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NC_013941.1\|WP_000246159.1\|3430254_3430965_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NC_013941.1\|WP_000517476.1\|3430983_3431295_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NC_013941.1\|WP_000206445.1\|3439081_3440137_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NC_013941.1\|WP_001084079.1\|3440681_3442244_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NC_013941.1\|WP_001233976.1\|3442341_3445041_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_013941.1\|WP_000144844.1\|3436772_3437696_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_013941.1\|WP_000039864.1\|3445648_3446383_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NC_013941.1\|WP_000063176.1\|3436482_3436776_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NC_013941.1\|WP_001246103.1\|3431488_3431812_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NC_013941.1\|WP_000490413.1\|3435055_3436093_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NC_013941.1\|WP_000281463.1\|3437692_3438343_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NC_013941.1\|WP_000085058.1\|3438324_3439071_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NC_013941.1\|WP_001173673.1\|3431861_3432467_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NC_013941.1\|WP_000568934.1\|3428729_3429779_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NC_013941.1\|WP_000372108.1\|3433895_3434804_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NC_013941.1\|WP_000956458.1\|3445232_3445385_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NC_013941.1\|WP_000029324.1\|3440148_3440685_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NC_013941.1\|WP_001295182.1\|3427987_3428749_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NC_013941.1\|WP_001090366.1\|3432466_3433894_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349

Protein	Function_ID	Function_description	E-value
NC_013941.1\|WP_001219242.1\|3429775_3430255_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NC_013941.1\|WP_000246159.1\|3430254_3430965_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.9955e-120
NC_013941.1\|WP_000517476.1\|3430983_3431295_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NC_013941.1\|WP_000206445.1\|3439081_3440137_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.45802e-155
NC_013941.1\|WP_001084079.1\|3440681_3442244_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NC_013941.1\|WP_001233976.1\|3442341_3445041_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NC_013941.1\|WP_000144844.1\|3436772_3437696_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	6.77292e-157
NC_013941.1\|WP_000039864.1\|3445648_3446383_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.85899e-137
NC_013941.1\|WP_000063176.1\|3436482_3436776_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
NC_013941.1\|WP_001246103.1\|3431488_3431812_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.44794e-52
NC_013941.1\|WP_000490413.1\|3435055_3436093_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NC_013941.1\|WP_000281463.1\|3437692_3438343_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	5.5854e-93
NC_013941.1\|WP_000085058.1\|3438324_3439071_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.00414e-48
NC_013941.1\|WP_001173673.1\|3431861_3432467_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NC_013941.1\|WP_000568934.1\|3428729_3429779_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NC_013941.1\|WP_000372108.1\|3433895_3434804_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NC_013941.1\|WP_000956458.1\|3445232_3445385_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NC_013941.1\|WP_000029324.1\|3440148_3440685_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	6.98091e-30
NC_013941.1\|WP_001295182.1\|3427987_3428749_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NC_013941.1\|WP_001090366.1\|3432466_3433894_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0

>NC_013941.1|WP_000490413.1|3435055_3436093_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPQSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NC_013941.1|WP_000372108.1|3433895_3434804_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NC_013941.1|WP_001090366.1|3432466_3433894_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRSRVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGEK
>NC_013941.1|WP_001173673.1|3431861_3432467_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NC_013941.1|WP_001246103.1|3431488_3431812_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLMTVGIMFGALFMWLLG
>NC_013941.1|WP_000517476.1|3430983_3431295_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NC_013941.1|WP_000246159.1|3430254_3430965_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVYALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NC_013941.1|WP_001219242.1|3429775_3430255_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NC_013941.1|WP_000568934.1|3428729_3429779_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELVELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NC_013941.1|WP_001295182.1|3427987_3428749_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NC_013941.1|WP_000063176.1|3436482_3436776_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NC_013941.1|WP_000144844.1|3436772_3437696_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARCSVDQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NC_013941.1|WP_000281463.1|3437692_3438343_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFVPELRTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEV
>NC_013941.1|WP_000085058.1|3438324_3439071_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSAPDLLSAIISRRDYYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDSFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NC_013941.1|WP_000206445.1|3439081_3440137_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTEQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NC_013941.1|WP_000029324.1|3440148_3440685_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAALSANVKAIDERLPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRHQRPTEFIRIRWALEYYQAGDVDNEQNQ
>NC_013941.1|WP_001084079.1|3440681_3442244_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQSSFAPKDYRRWDDIWEDGLEAEKLREALLSLEHAFQFGPDSPSFMQDFEVLMGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCSHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQAPLWRKLWLNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLERVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NC_013941.1|WP_001233976.1|3442341_3445041_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKEGGDGYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLAPELKIPEGSRKNYEKISHSTLGYWLWNYYLSECEELLPSSSLSSRKLTRVIEMWMSITTGHHGRPPDRIDELDNFLPEDKAAARDFLLEIKALFPLIEIPTFWDDDEGVELLKQLSWYISATVVLADWTGSSTRFFPRVAHPMDIKDYWQKTLVQAQNALTVFPPKAETAPFTGINTLFPFIEHPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLMAARKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFANSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNCVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQESIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIEMETLARFGKEDGSQRAGKVLICTQVLEQSVDCDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDAPGDEWFGSAMRNSAYVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFKPGYAANINDYLPEKLSTRLAEESVSLWLATCIAGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRQWCIEQRQDPEMANVILVTDDESCGYSAREGLIGKVD
>NC_013941.1|WP_000956458.1|3445232_3445385_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NC_013941.1|WP_000039864.1|3445648_3446383_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAQLEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKNGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

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Crispr_ID: NC_013941_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013941_3

3462080-3462293

Unclear

I-E

Consensus_repeat	Method
GCGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
GCGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
GCGGTTTATCCCCGCTGGCGCGGGGAACTCT	PILER-CR

3 spacers

The CRISPR arrays of NC_013941_3

>merge|NC_013941|3|3462080-3462293|CRISPRCasFinder,CRT,PILER-CR
GTGGTTTATCCCCACTGGCGCGGGGAACTCCTCGACTTTAATTTTTTCGCTGCCCGCTTTTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTTGATAGTTCGCACGATATTCAATCGGAACAGCGGTTTATCCCCGCTGGCGCGGGGAACTCGTATTACTGACCAATTTCAGGAAGTCTGTGAGCGGTTTATCCCCGCTGGCGCGGGGAACTCT

>NC_013941|3|3|3462080-3462292|CRISPRCasFinder
GTGGTTTATCCCCACTGGCGCGGGGAACTC	CTCGACTTTAATTTTTTCGCTGCCCGCTTTT
GCGGTTTATCCCCGCTGGCGCGGGGAACTC	TTGATAGTTCGCACGATATTCAATCGGAACA
GCGGTTTATCCCCGCTGGCGCGGGGAACTC	GTATTACTGACCAATTTCAGGAAGTCTGTGA
GCGGTTTATCCCCGCTGGCGCGGGGAACTC

>NC_013941|3|2|3462080-3462292|CRT
GTGGTTTATCCCCACTGGCGCGGGGAACTC	CTCGACTTTAATTTTTTCGCTGCCCGCTTTT
GCGGTTTATCCCCGCTGGCGCGGGGAACTC	TTGATAGTTCGCACGATATTCAATCGGAACA
GCGGTTTATCCCCGCTGGCGCGGGGAACTC	GTATTACTGACCAATTTCAGGAAGTCTGTGA
GCGGTTTATCCCCGCTGGCGCGGGGAACTC

>NC_013941|3|2|3462141-3462293|PILER-CR
GCGGTTTATCCCCGCTGGCGCGGGGAACTCT	TGATAGTTCGCACGATATTCAATCGGAACA
GCGGTTTATCCCCGCTGGCGCGGGGAACTCG	TATTACTGACCAATTTCAGGAAGTCTGTGA
GCGGTTTATCCCCGCTGGCGCGGGGAACTCT

Protein	Signature genes	Signature genes Name	Protein_function
NC_013941.1\|WP_000039701.1\|3459965_3461444_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NC_013941.1\|WP_000266606.1\|3459828_3459939_+\|hypothetical-protein	unknown	unknown	unknown
NC_013941.1\|WP_001243489.1\|3464091_3464985_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NC_013941.1\|WP_001199973.1\|3462631_3463303_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NC_013941.1\|WP_000581937.1\|3471566_3471815_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NC_013941.1\|WP_001301471.1\|3450726_3451998_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NC_013941.1\|WP_001164579.1\|3458661_3459792_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NC_013941.1\|WP_001301644.1\|3453845_3454625_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NC_013941.1\|WP_001217990.1\|3464999_3466148_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NC_013941.1\|WP_000109504.1\|3451988_3452249_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NC_013941.1\|WP_024201855.1\|3457557_3458343_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NC_013941.1\|WP_000971922.1\|3454602_3456012_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NC_013941.1\|WP_000036723.1\|3467118_3468417_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NC_013941.1\|WP_001071648.1\|3470369_3471161_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NC_013941.1\|WP_042909427.1\|3463457_3464078_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
NC_013941.1\|WP_000059285.1\|3456033_3457488_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NC_013941.1\|WP_012779383.1\|3466144_3467059_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NC_013941.1\|WP_000254738.1\|3471231_3471567_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NC_013941.1\|WP_001130278.1\|3452265_3452841_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NC_013941.1\|WP_000210874.1\|3468504_3470142_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437

Protein	Function_ID	Function_description	E-value
NC_013941.1\|WP_000039701.1\|3459965_3461444_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.25899e-108
NC_013941.1\|WP_001301471.1\|3450726_3451998_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	4.44674e-126
NC_013941.1\|WP_001243489.1\|3464091_3464985_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	5.9794e-91
NC_013941.1\|WP_001199973.1\|3462631_3463303_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NC_013941.1\|WP_000581937.1\|3471566_3471815_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NC_013941.1\|WP_042909427.1\|3463457_3464078_+\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	2.13345e-77
NC_013941.1\|WP_001164579.1\|3458661_3459792_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.04946e-26
NC_013941.1\|WP_001301644.1\|3453845_3454625_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.2806e-65
NC_013941.1\|WP_001217990.1\|3464999_3466148_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	5.38776e-66
NC_013941.1\|WP_000109504.1\|3451988_3452249_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	3.97897e-40
NC_013941.1\|WP_024201855.1\|3457557_3458343_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.05518e-137
NC_013941.1\|WP_000971922.1\|3454602_3456012_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.81607e-50
NC_013941.1\|WP_000036723.1\|3467118_3468417_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NC_013941.1\|WP_001071648.1\|3470369_3471161_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NC_013941.1\|WP_000059285.1\|3456033_3457488_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	5.48448e-82
NC_013941.1\|WP_012779383.1\|3466144_3467059_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.30872e-104
NC_013941.1\|WP_000254738.1\|3471231_3471567_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NC_013941.1\|WP_001130278.1\|3452265_3452841_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	1.96043e-88
NC_013941.1\|WP_000210874.1\|3468504_3470142_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0

>NC_013941.1|WP_000039701.1|3459965_3461444_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGQITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKALTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NC_013941.1|WP_000266606.1|3459828_3459939_+|hypothetical-protein
MWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>NC_013941.1|WP_001164579.1|3458661_3459792_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGH
>NC_013941.1|WP_024201855.1|3457557_3458343_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANVFIPSFVKDNGETKEMIENQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLIGAAVFLASQASNYVNGHLLVVDGGYLVR
>NC_013941.1|WP_000059285.1|3456033_3457488_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGPAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVNCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIGK
>NC_013941.1|WP_000971922.1|3454602_3456012_-|MFS-transporter
MMGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSAHLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGVLLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGCFAEAHAIVHRYFGPHVLLGDEVATATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLAAVLLAGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NC_013941.1|WP_001301644.1|3453845_3454625_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAHGNSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFASEFVARHIAEWQRQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDAPFITLEQRTEHGLRCCRIRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAELPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NC_013941.1|WP_001130278.1|3452265_3452841_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISQIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NC_013941.1|WP_000109504.1|3451988_3452249_+|ferredoxin-family-protein
MSVARNLWRAADAPHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLGCGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NC_013941.1|WP_001301471.1|3450726_3451998_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDCATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLARFKTHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDTALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPVLLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLLWRHLRRHGLWNLAGDVIRSVRCL
>NC_013941.1|WP_001199973.1|3462631_3463303_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NC_013941.1|WP_042909427.1|3463457_3464078_+|LemA-family-protein
MKRDLNTLRIFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSSHERDVLEAVTLARSQANRASSDLQQTPGDEQKLQAWQQAQAQVTRTLGQLTIISERYPELKSQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPDDVAAVSKAPTIDFSQNANAH
>NC_013941.1|WP_001243489.1|3464091_3464985_+|YgcG-family-protein
MRNFIFLMAFFCSSVFATQIPVPESPKYVNDLTGTLTNSEVNTLTNQIKALTQKNYAQLVVLVVETTGDETIEQYATRVFDSWKPGDKDRDDGVLLLVAWQDHTVRIEIGYGLEGIITDAQSGKIIRNSIIPAFKKGDLAGGLQKGISDIESRLTGNNLATITPTDHPLPFSGWWALLVWAIVLTFISARGYIKTLGVICFAAIVLAFVLPIAGFSGSWGVLATLLCFATPFLAVAIAFTPFGKKVRDLMRDANQPSRHTRSNSSSHYSSSSSSSFDNDNFSGGGGSSGGGGASGRW
>NC_013941.1|WP_001217990.1|3464999_3466148_+|YgcG-family-protein
MRIFLLLLMLCGFQVFAERLPSVTDLTGTLTTEEQTALTQQLQTLEQQNHFQVAVLVTPTTGGKNIKLAASQRYGVYHWKPVGEKRYGEGILILVVWPEGLASMKIGHGLEEMLPPEQAAQIVRYHMQPEFEKNNLFAGLTGGIESIAQFTHIKANLSPLDALANHLFANPQRSLPCLAWTLLMIVAIVVLWLFASRPRRGIWMISMITPMVWFFSFQDDVIIRRVSVVCFSLLLATTCKQRLAVVFNMCRVFPMMLTPKNKNAKVKKQKKTPQVRESGRNSLFVVMLIIIVGWCLVFASNKDIAFISTIIGLIDHFIGPITIAGIVLLIIVAKFTGNLKLGSGEKSNRKTGNRNAHSRSSSRNSFRGGGGSSGGGGSSVRW
>NC_013941.1|WP_012779383.1|3466144_3467059_+|YgcG-family-protein
MIVMRLIFILFTLWCLPGLAQQIAVPELRQQVTDITGTLSTSEQQSLTQQLQDITHKTRAQVAVLVVPSTGDDSIEQYATRVFDSWKLGDKQRNDGILLLVAWEDHAVRIEVGYGLEGVVTDLQAAKIIRDILIPAFKSDDLMGGLTLASENIGALLLNGELPEDRGDYYSINPPIPLSLAVIILLAVLSYFIVFTDPSNLPWITLTGAIYGMVFLYVAEPGPWTNLIVACGMLTPFAIVPLVIFWLIVNKKLRAKYKKLSKDRASRKGSSSSSSGGGSSGGGSGGGFSGGGGSSGGGGASGRW
>NC_013941.1|WP_000036723.1|3467118_3468417_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NC_013941.1|WP_000210874.1|3468504_3470142_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWCDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NC_013941.1|WP_001071648.1|3470369_3471161_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NC_013941.1|WP_000254738.1|3471231_3471567_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NC_013941.1|WP_000581937.1|3471566_3471815_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW

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Crispr_ID: NC_013941_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013941_4

5188346-5188495

Orphan

Consensus_repeat	Method
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013941_4

>merge|NC_013941|4|5188346-5188495|CRISPRCasFinder
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

>NC_013941|4|4|5188346-5188495|CRISPRCasFinder
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	TGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTG
CGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_013941.1\|WP_001059397.1\|5182932_5183436_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_013941.1\|WP_000584114.1\|5190309_5191410_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NC_013941.1\|WP_001359437.1\|5195784_5196612_+\|integrase-arm-type-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
NC_013941.1\|WP_000036456.1\|5179367_5181248_+\|hypothetical-protein	unknown	unknown	unknown
NC_013941.1\|WP_000012925.1\|5181304_5182309_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NC_013941.1\|WP_000880885.1\|5200284_5201937_-\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|376576
NC_013941.1\|WP_000168588.1\|5197071_5197923_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|225973
NC_013941.1\|WP_000777276.1\|5198463_5199567_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NC_013941.1\|WP_001359670.1\|5194284_5195304_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NC_013941.1\|WP_000583470.1\|5178792_5179245_+\|toxin-antitoxin-biofilm-protein-TabA	unknown	unknown	gnl\|CDD\|225345
NC_013941.1\|WP_000079624.1\|5183628_5184825_+\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
NC_013941.1\|WP_000416407.1\|5184879_5187735_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NC_013941.1\|WP_000397144.1\|5188531_5190043_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NC_013941.1\|WP_001294533.1\|5192652_5194155_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NC_013941.1\|WP_001295681.1\|5191409_5192492_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NC_013941.1\|WP_000002953.1\|5182470_5182887_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NC_013941.1\|WP_000256679.1\|5178054_5178648_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NC_013941.1\|WP_000500712.1\|5177270_5177984_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|183714
NC_013941.1\|WP_000357807.1\|5199570_5200278_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
NC_013941.1\|WP_000786399.1\|5187734_5188178_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581

Protein	Function_ID	Function_description	E-value
NC_013941.1\|WP_001059397.1\|5182932_5183436_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.52162e-19
NC_013941.1\|WP_000584114.1\|5190309_5191410_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NC_013941.1\|WP_001359437.1\|5195784_5196612_+\|integrase-arm-type-DNA-binding-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	1.65848e-56
NC_013941.1\|WP_000079624.1\|5183628_5184825_+\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	5.78104e-151
NC_013941.1\|WP_000012925.1\|5181304_5182309_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NC_013941.1\|WP_000880885.1\|5200284_5201937_-\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	7.7113e-06
NC_013941.1\|WP_000168588.1\|5197071_5197923_-\|HNH-endonuclease	gnl\|CDD\|225973	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms].	2.6163e-129
NC_013941.1\|WP_000777276.1\|5198463_5199567_-\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	0.000395374
NC_013941.1\|WP_001359670.1\|5194284_5195304_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.66572e-168
NC_013941.1\|WP_000583470.1\|5178792_5179245_+\|toxin-antitoxin-biofilm-protein-TabA	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	3.50239e-70
NC_013941.1\|WP_000416407.1\|5184879_5187735_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NC_013941.1\|WP_000397144.1\|5188531_5190043_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NC_013941.1\|WP_001294533.1\|5192652_5194155_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NC_013941.1\|WP_001295681.1\|5191409_5192492_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NC_013941.1\|WP_000002953.1\|5182470_5182887_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	4.50628e-69
NC_013941.1\|WP_000256679.1\|5178054_5178648_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.22362e-10
NC_013941.1\|WP_000500712.1\|5177270_5177984_-\|SDR-family-oxidoreductase	gnl\|CDD\|183714	PRK12742, PRK12742, SDR family oxidoreductase.	2.19644e-150
NC_013941.1\|WP_000357807.1\|5199570_5200278_-\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	4.60934e-29
NC_013941.1\|WP_000786399.1\|5187734_5188178_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66

>NC_013941.1|WP_000786399.1|5187734_5188178_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NC_013941.1|WP_000416407.1|5184879_5187735_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NC_013941.1|WP_000079624.1|5183628_5184825_+|DUF898-domain-containing-protein
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFFSCLVFVFFYFAILMTVSADMPLIGCVLTLSLLVLLIFMAAKGLRYQALMTSLNGVRFSFNFSMKGFWWVTFFLPILMAIGMGTVFFISTKMLHANSSSSVIVSVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTAYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGIMPSLPFL
>NC_013941.1|WP_001059397.1|5182932_5183436_-|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLAGSESDICELQKMYFLPAIRGKGLAKKLALKAMEEAREMGFKRCYLETTAFLKEAIGLYEHLGFQHIDYALGCTGHVDCEVRMLREL
>NC_013941.1|WP_000002953.1|5182470_5182887_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
>NC_013941.1|WP_000012925.1|5181304_5182309_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKPFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
>NC_013941.1|WP_000036456.1|5179367_5181248_+|hypothetical-protein
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNNFARNAEGQDNTRNILNPKTFLEFLVKIFTLGYVDFSKRSNEAGRNMMAHIESSSYIKNNDGSEIMKFVMNNPEGERADSPKVIIEISLSTITTMGTRQGHTAIIFPQPDGSTNRYEGKSFERKDESSLHLITNKVLACYQREANKEIARLLNNHQKLNNLQKLNNLQKLNNIQELNNSQELNNSQELNNSQELNNSQELNNSQELNNSQELNNSQELNNPQELNNPQELNDSQELNDSQELNNSQDLKNSQVSCKGSVDFTITDLLEKSLNNALLAIRNEHLLLMPHVCSESISYLLGENGILEEIDKLYELNDHGIDNDKEGNNEINDIMINLSHILIESLDDAKVNLTPVIHSMLMTFLELPYNNDVKILEWCFNKSMQYFDDSAKIEHACSVINHINFRRDQSKVAETLFFNLDKEPYKNSPELQELIWKKLVVYVNDFNLSNREKTYLIQRIFNNVESLFNKVPVSILVNDIFMNDFFMKNTEMINWYFPRLLKSYEDEKIYFDKLGYNFNNKESNEEIMKNQPKDVIEEKLNNELKLRFRMMQTILKSEVNVSPFIDQQRLNTLNPPENLRIAIEKFGWKKKTITA
>NC_013941.1|WP_000583470.1|5178792_5179245_+|toxin-antitoxin-biofilm-protein-TabA
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>NC_013941.1|WP_000256679.1|5178054_5178648_+|TetR/AcrR-family-transcriptional-regulator
MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLVDILRDDRPVGECLAEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETAIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSLEQLCATAALAGEAIKTILKE
>NC_013941.1|WP_000500712.1|5177270_5177984_-|SDR-family-oxidoreductase
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
>NC_013941.1|WP_000397144.1|5188531_5190043_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NC_013941.1|WP_000584114.1|5190309_5191410_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NC_013941.1|WP_001295681.1|5191409_5192492_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NC_013941.1|WP_001294533.1|5192652_5194155_-|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLARLKNIDVNDWQPHANPVVVWDIFGEKGHSVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEMLQKGFQASTEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>NC_013941.1|WP_001359670.1|5194284_5195304_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVAALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIKHVRDGKARYRVVLKADF
>NC_013941.1|WP_001359437.1|5195784_5196612_+|integrase-arm-type-DNA-binding-domain-containing-protein
MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHKRAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYDPAQEMSGAVASSNRQHRPALELKRIPELLDKIDSYTGRPLTHCTTELTLLIFIRSSKLHFARWSEIDFETSMWTIPLDWYCSKQRVGLVQ
>NC_013941.1|WP_000168588.1|5197071_5197923_-|HNH-endonuclease
MASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPRLFDYGTEIYEPLHSLLERFGPQRSQYRPDMPFWRLQGDGIWQLHNAERCSTAGSSRQPPVKELNEYHVAGGFDEQHYALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQQIRKQRDPLFRKNVLRAYNYQCAICGFNMRHDDTTVALEAAHIKWKQHGGPCEIPNGLALCAIHHKAFDKGSIGLDENMRVLVSDAVNGGGIVERLFWDFDGKTIALPQVRKNYPYEGFVGER
>NC_013941.1|WP_000777276.1|5198463_5199567_-|HNH-endonuclease
MKLSIDISELIQLGKKMLPEGVDFFLDESPIDFDPIDIELSTGKEVSIEDLDPGSGLISYHGRQVLLYIRDHSGRYDAAIVDGEKGKRFHIAWCRTLDEMRHKNRFERYHATNRIDGLFEIDDGSGRSQDVDLRVCMNCLERLNYKGSIDKQRKREIFKSFSLNEFFSDYSTCFRHMPKGIYDKTNSGYVENWKEISKEIREKANYVCNDCGVNLSTAKNLCHVHHKNGIKYDNHHENLLVLCKDCHRKQPLHEGIFVTQAEMAIIQRLRSQQGLLKAESWNEIYDLTDPSVHGDINMMQHKGFQPPVPGLDLQNSEHEIIATVEAAWPGLKIAVNLTPAEVEGWRIYTVGELVKEIQTGAFTPAKL
>NC_013941.1|WP_000357807.1|5199570_5200278_-|OmpA-family-protein
MDKIIGKQLPKKDQDNEHWVSMSDLMAGLMMVFMFISIAYMHYVRIEKEKIKEVAVAYENAQLQLYNALDIEFAKDLQDWDAEIDKQTLEVRFKSPDVLFGLGSTELKPKFKLILDDFFPRYLKVLDNYQEHITEVRIEGHTSTDWTGTTNPDIAYFNNMALSQGRTRAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGKEDPNRSRRVTFKVVTNAELQIRKIIQE
>NC_013941.1|WP_000880885.1|5200284_5201937_-|MotA/TolQ/ExbB-proton-channel-family-protein
MLAQLFEQLFQSIDSTLITNIFIWAVIFVFLSAWWCDKKNIHSKFREYAPTLMGALGILGTFIGIIIGLLNFNTESIDTSIPVLLGGLKTAFITSIVGMFFAILFNGMDAFFFANKRSALAENNPESVTPEHIYHELKEQNQTLTKLVSGINGDSEGSLIAQIKLLRTEISDSSQAQLANHTHFSNKLWEQLEQFADLMAKGATEQIIDALRQVIIDFNQNLTEQFGENFKALDASVKKLVEWQGNYKTQIEQMSEQYQQSVESLVETKTAVAGIWEECKEIPLAMSELREVLQVNQHQISELSRHLETFVAIRDKATTVLPEIQNKMAEVGELLKSGAANVSASLEQTSQQILLNADSMRVALDEGTEGFRQSVTQTQQAFASMAHDVSNSSETLTSTLGETITEMKQSGEEFLKSLESHSKELHRNMEQNTTNVIDMFSKTGEKINHQLSSNADNMFDSIQTSFDKASAGLTSQVRESIEKFALSINEQLHAFEQATEREMNREMQSLGNALLSISKGFVGNYEKLIKDYQIVMGQLQALISANKHRG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	101196-101230	2	0.943
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	165464-165498	3	0.914
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14239-14273	5	0.857
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56080-56114	5	0.857
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	6804-6838	6	0.829
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208981-209015	6	0.829
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219475-219509	6	0.829
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210309-210343	6	0.829
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191264-191298	6	0.829
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30177-30211	6	0.829
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	170-204	6	0.829
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	88-122	6	0.829
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87137-87171	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	138033-138067	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	43-77	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3372-3406	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208887-208921	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	42-76	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3371-3405	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219381-219415	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	42-76	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3371-3405	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210215-210249	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	42-76	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3371-3405	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191170-191204	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27246-27280	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	18350-18384	7	0.8
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15018-15052	7	0.8
NC_013941_2	2.1\|3436204\|30\|NC_013941\|CRISPRCasFinder,CRT	3436204-3436233	30	NC_015512	Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence	90202-90231	7	0.767
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	61916-61950	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4114-4148	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229148-229182	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229249-229283	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229350-229384	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229451-229485	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	203852-203886	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	204038-204072	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	204131-204165	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4113-4147	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239642-239676	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239743-239777	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239844-239878	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239945-239979	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	214346-214380	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	214532-214566	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	214625-214659	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4113-4147	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230554-230588	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230655-230689	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230756-230790	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230857-230891	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	205180-205214	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	205366-205400	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	205459-205493	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4113-4147	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211524-211558	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211625-211659	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211726-211760	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211827-211861	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	186135-186169	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	186321-186355	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	186414-186448	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	14272-14306	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	6744-6778	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7392-7426	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	83590-83624	8	0.771
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84216-84250	8	0.771
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP033467	Enterobacter cloacae strain E3442 plasmid p3442-FRI-1, complete sequence	31628-31658	8	0.742
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386558-386592	9	0.743
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4013-4047	9	0.743
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4012-4046	9	0.743
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4012-4046	9	0.743
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4012-4046	9	0.743
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	13988-14022	9	0.743
NC_013941_1	1.1\|71501\|35\|NC_013941\|CRISPRCasFinder	71501-71535	35	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	41415-41449	9	0.743
NC_013941_2	2.1\|3436204\|30\|NC_013941\|CRISPRCasFinder,CRT	3436204-3436233	30	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	105803-105832	9	0.7
NC_013941_2	2.3\|3436326\|30\|NC_013941\|CRISPRCasFinder,CRT,PILER-CR	3436326-3436355	30	NZ_CP024200	Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence	819687-819716	9	0.7
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP050075	Enterobacter kobei strain 070 plasmid p070_A-KPC-2, complete sequence	53286-53316	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KY020154	Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence	6248-6278	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KY399975	Enterobacter cloacae strain EClY2403 plasmid pNDM1_EClY2403, complete sequence	48844-48874	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KY399974	Enterobacter cloacae strain EClY2402 plasmid pNDM1_EClY2402, complete sequence	48844-48874	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KY986974	Citrobacter freundii strain 112298 plasmid p112298-tetA, complete sequence	113932-113962	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_LC511995	Enterobacter hormaechei subsp. xiangfangensis strain MY146 plasmid pMY146-rmtE, complete sequence	58738-58768	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KY270850	Klebsiella pneumoniae strain 12181 plasmid p12181-KPC, complete sequence	125850-125880	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KY270849	Klebsiella pneumoniae strain 0716 plasmid p0716-KPC, complete sequence	129293-129323	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KR351290	Klebsiella pneumoniae subsp. pneumoniae strain K351 plasmid pK351, complete sequence	33203-33233	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KJ812998	Enterobacter cloacae isolate GN574 plasmid pNDM-Ec1GN574, complete sequence	37223-37253	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KP900016	Leclercia adecarboxylata strain P10164 plasmid pP10164-NDM, complete sequence	57706-57736	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KP868647	Enterobacter cloacae strain WCHECl-14653 plasmid pNDM1_EC14653, complete sequence	48845-48875	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP040123	Klebsiella pneumoniae strain LSH-KPN148 plasmid pLSH-KPN148-1, complete sequence	146401-146431	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026131	Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence	20317-20347	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP029731	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed3, complete sequence	21125-21155	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KC887916	Escherichia coli strain ARL10/167 isolate EC4 plasmid pEC4-NDM-6, complete sequence	37223-37253	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KC887917	Enterobacter cloacae isolate ECL3 plasmid pECL3-NDM-1, complete sequence	32073-32103	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP036301	Klebsiella pneumoniae subsp. pneumoniae strain WCHKP015093 plasmid pKPC2_015093, complete sequence	94196-94226	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	CP044029	Klebsiella pneumoniae strain RJY9645 plasmid pY9645-166, complete sequence	41480-41510	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MN891681	Klebsiella pneumoniae strain 14899 plasmid p14899-KPC, complete sequence	55332-55362	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP042480	Citrobacter freundii strain C50 plasmid pC50_002, complete sequence	134154-134184	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NC_025184	Klebsiella pneumoniae strain RJF866 plasmid pRJF866, complete sequence	7570-7600	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP042483	Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence	101543-101573	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP034324	Klebsiella pneumoniae isolate KSH203 plasmid pKSH203-KPC, complete sequence	20319-20349	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP040547	Klebsiella pneumoniae strain CR-HvKP5 plasmid pCR-HvKP5-KPC, complete sequence	135589-135619	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP022350	Klebsiella michiganensis strain K516 plasmid pK516_NDM1, complete sequence	82373-82403	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP039820	Klebsiella pneumoniae strain C2414 plasmid pC2414-2-KPC, complete sequence	154699-154729	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP044259	Klebsiella pneumoniae strain KP65 plasmid pKPC-2-KP65, complete sequence	122675-122705	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP039810	Klebsiella pneumoniae strain C2660 plasmid pC2660-3-KPC, complete sequence	93035-93065	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	CP038003	Klebsiella pneumoniae strain SCKP020009 plasmid pKPC2_020009, complete sequence	119443-119473	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP033404	Klebsiella pneumoniae strain WCHKP115069 plasmid pKPC2_115069, complete sequence	93362-93392	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP036306	Klebsiella pneumoniae strain WCHKP020098 plasmid pKPC2_020098, complete sequence	119444-119474	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	CP028790	Klebsiella pneumoniae strain WCHKP020030 plasmid pKPC2_020030, complete sequence	88108-88138	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP018999	Escherichia coli strain Ecol_AZ153 plasmid pECAZ153_KPC, complete sequence	117662-117692	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP042553	Enterobacter hormaechei strain C45 plasmid pC45_002, complete sequence	131512-131542	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MK933278	Enterobacter hormaechei strain SCNJ07 plasmid pNDM-SCNJ07, complete sequence	7570-7600	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026141	Klebsiella pneumoniae strain F127 plasmid pF127_1, complete sequence	85866-85896	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026147	Klebsiella pneumoniae strain F132 plasmid pF132_2, complete sequence	44606-44636	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026152	Klebsiella pneumoniae strain F138 plasmid pF138_3, complete sequence	82258-82288	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP023725	Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed3, complete sequence	9028-9058	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026137	Klebsiella pneumoniae strain F77 plasmid pF77_1, complete sequence	38151-38181	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP042519	Citrobacter freundii strain E33 plasmid pE33_002, complete sequence	134154-134184	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MN823990	Klebsiella pneumoniae strain 120314013 plasmid p314013-FII, complete sequence	10450-10480	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MN842295	Klebsiella pneumoniae strain 08291 plasmid pW08291-KPC, complete sequence	51751-51781	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP018366	Klebsiella pneumoniae strain Kp_Goe_62629 plasmid pKp_Goe_629-2, complete sequence	2013-2043	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_AP018674	Klebsiella pneumoniae strain GSU10-3 plasmid pGSU10-3-3, complete sequence	51107-51137	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP023187	Klebsiella michiganensis strain K518 plasmid pK518_NDM1, complete sequence	14334-14364	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP043515	Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed4, complete sequence	111144-111174	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	CP028547	Klebsiella pneumoniae subsp. pneumoniae strain SCKP020143 plasmid pKPC2_020143, complete sequence	53129-53159	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_AP018835	Enterobacter hormaechei subsp. xiangfangensis strain M324 plasmid pM324-NDM1, complete sequence	32483-32513	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_AP018832	Enterobacter hormaechei subsp. xiangfangensis strain M308 plasmid pM308-NDM1, complete sequence	32483-32513	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP023942	Klebsiella pneumoniae strain FDAARGOS_444 plasmid unnamed2	24525-24555	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MH909345	Klebsiella pneumoniae strain N201205880 plasmid p205880-NDM, complete sequence	69149-69179	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MH477636	Klebsiella pneumoniae strain 130504051 plasmid p504051-KPC, complete sequence	131158-131188	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MK036888	Klebsiella pneumoniae strain 911021 plasmid p911021-KPC, complete sequence	153082-153112	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MK036886	Klebsiella pneumoniae strain 283149 plasmid p283149-KPC, complete sequence	119578-119608	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF156695	Klebsiella pneumoniae strain 1642 plasmid p1642-1, complete sequence	50344-50374	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF168406	Klebsiella pneumoniae strain 283747 plasmid p283747-KPC, complete sequence	98298-98328	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_LC511996	Enterobacter hormaechei subsp. xiangfangensis strain MY458 plasmid pMY458-rmtE, complete sequence	58147-58177	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MG462729	Escherichia coli strain AMA1742 plasmid pAMA1742, complete sequence	37224-37254	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MH325469	Enterobacter hormaechei strain Ec13 plasmid pEc13, complete sequence	63968-63998	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026698	Citrobacter koseri strain AR_0025 plasmid unitig_2_pilon, complete sequence	9374-9404	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP030133	Klebsiella pneumoniae strain 160111 plasmid pIncFII_L111, complete sequence	18874-18904	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP025463	Klebsiella pneumoniae strain F44 plasmid p44-2, complete sequence	155758-155788	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MT108206	Klebsiella pneumoniae strain A1743 plasmid pA1743-KPC, complete sequence	51158-51188	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MT108207	Klebsiella pneumoniae strain A1750 plasmid pA1750-KPC, complete sequence	19805-19835	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MT108208	Klebsiella pneumoniae strain BJ20 plasmid pBJ20-KPC, complete sequence	28123-28153	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF042356	Enterobacter cloacae strain 20ES plasmid pNDM_20ES, complete sequence	103167-103197	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF042359	Serratia marcescens strain 7209 plasmid pNDM_7209, complete sequence	79993-80023	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP028541	Klebsiella pneumoniae strain WCHKP2 plasmid pKPC2_020002, complete sequence	146219-146249	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP034756	Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p2, complete sequence	67001-67031	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP016763	Citrobacter freundii strain B38 plasmid pOZ172, complete sequence	54201-54231	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_KP893385	Klebsiella pneumoniae subsp. pneumoniae strain KP1034 plasmid pKP1034, complete sequence	35851-35881	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026133	Klebsiella pneumoniae strain F5 plasmid pF5_1, complete sequence	72642-72672	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP033962	Klebsiella pneumoniae strain L482 plasmid p3_L382, complete sequence	104862-104892	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP017059	Citrobacter freundii strain SL151 plasmid unnamed2, complete sequence	72031-72061	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026241	Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-e790, complete sequence	43466-43496	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP033394	Klebsiella pneumoniae strain WCHKP015625 plasmid pCTXM65_015625, complete sequence	26599-26629	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP036362	Klebsiella pneumoniae strain WCHKP2080 plasmid pKPC2_095080, complete sequence	35652-35682	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MT066418	Klebsiella pneumoniae strain ST11 plasmid p158590-KPC, complete sequence	126985-127015	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP025952	Klebsiella pneumoniae subsp. pneumoniae strain GD4 plasmid pKPGD4, complete sequence	32555-32585	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP036372	Klebsiella pneumoniae strain WCHKP020037 plasmid pKPC2_020037, complete sequence	141473-141503	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MN891684	Klebsiella pneumoniae strain BJ107 plasmid pBJ107-KPC, complete sequence	109257-109287	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MN891685	Klebsiella pneumoniae strain BJ119 plasmid pBJ119-KPC, complete sequence	42378-42408	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026551	Citrobacter sp. SL156 plasmid unnamed2	202844-202874	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP035386	Enterobacter hormaechei strain S11_16 plasmid unnamed1, complete sequence	102076-102106	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP022697	Citrobacter farmeri strain AUSMDU00008141 plasmid pAUSMDU8141-2, complete sequence	120093-120123	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP021538	Escherichia coli strain AR_0119 plasmid unitig_4, complete sequence	57594-57624	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP035277	Citrobacter freundii strain R17 plasmid pCFR17_1, complete sequence	177632-177662	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP017850	Klebsiella variicola strain GJ2 plasmid pKPGJ-2a, complete sequence	7442-7472	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP017285	Klebsiella variicola strain GJ3 plasmid pKPGJ-3a, complete sequence	14835-14865	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP044035	Klebsiella pneumoniae strain FDAARGOS_630 plasmid unnamed1, complete sequence	90147-90177	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP017283	Klebsiella variicola strain GJ1 plasmid pKPGJ-1a, complete sequence	27972-28002	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NC_021501	Klebsiella michiganensis E718 plasmid pKOX_NDM1, complete sequence	103182-103212	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP023914	Klebsiella pneumoniae strain FDAARGOS_439 plasmid unnamed3, complete sequence	42487-42517	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP040541	Klebsiella pneumoniae strain CR-HvKP4 plasmid pCR-HvKP4-pKPC, complete sequence	146288-146318	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026584	Klebsiella pneumoniae strain WCHKP649 plasmid pKPC2_095649, complete sequence	83789-83819	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP028582	Klebsiella pneumoniae strain WCHKP36 plasmid pKPC2_020036, complete sequence	41858-41888	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP036366	Klebsiella pneumoniae strain WCHKP115068 plasmid pCTXM65_115068, complete sequence	15003-15033	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MN842291	Klebsiella pneumoniae strain 11935 plasmid p11935-KPC, complete sequence	58045-58075	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MN842292	Klebsiella pneumoniae strain 12085 plasmid p12085-KPC, complete sequence	32256-32286	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	CP016403	Klebsiella pneumoniae subsp. pneumoniae strain F5 plasmid pF5, complete sequence	5831-5861	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP016402	Klebsiella pneumoniae subsp. pneumoniae strain F77 plasmid pF77, complete sequence	6143-6173	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP040598	Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid pKpvST15_NDM-1, complete sequence	50194-50224	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP014296	Klebsiella pneumoniae strain KP38731 plasmid unnamed11 sequence	38807-38837	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026025	Klebsiella pneumoniae strain 11420 plasmid p11420-KPC, complete sequence	44620-44650	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP030345	Enterobacter hormaechei strain AR_038 plasmid unnamed1	117619-117649	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP026589	Klebsiella pneumoniae strain NUHL30457 plasmid p3, complete sequence	60862-60892	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MN891678	Klebsiella pneumoniae strain Kpn47 plasmid pKpn47-KPC, complete sequence	26770-26800	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MH909344	Enterobacter cloacae strain 12949 plasmid p12949-FIIY, complete sequence	72983-73013	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MH255827	Klebsiella pneumoniae subsp. pneumoniae strain SH9 plasmid pSH9-KPC, complete sequence	40270-40300	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MH917285	Klebsiella pneumoniae strain 427113 plasmid p427113-Ct1/2, complete sequence	147742-147772	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MH909327	Klebsiella pneumoniae strain 526316 plasmid p526316-KPC, complete sequence	109061-109091	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MK124610	Citrobacter werkmanii strain Cb_CB1_SE1_NDM_08_2017 plasmid pCB1_SE1_NDM, complete sequence	71931-71961	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF133495	Klebsiella pneumoniae strain 675920 plasmid p675920-1, complete sequence	135467-135497	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF168403	Klebsiella pneumoniae strain 12139 plasmid p12139-KPC, complete sequence	96619-96649	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF168405	Klebsiella pneumoniae strain 64917 plasmid p64917-KPC, complete sequence	96616-96646	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_LC511997	Enterobacter hormaechei subsp. xiangfangensis strain MY460 plasmid pMY460-rmtE, complete sequence	251169-251199	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP032893	Enterobacter kobei strain WCHEK045523 plasmid p1_045523, complete sequence	144679-144709	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP018455	Klebsiella pneumoniae strain SWU01 plasmid unnamed, complete sequence	71827-71857	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MT109193	Klebsiella pneumoniae strain 156070 plasmid p156070-KPC, complete sequence	379-409	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP035537	Klebsiella pneumoniae subsp. pneumoniae strain CCRI-22199 plasmid pKp199-2, complete sequence	41001-41031	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF042350	Klebsiella pneumoniae strain 18ES plasmid pNDM_18ES, complete sequence	102832-102862	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF042351	Serratia marcescens strain 12TM plasmid pNDM_12TM, complete sequence	102594-102624	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF042358	Enterobacter cloacae strain 22ES plasmid pNDM_22ES, complete sequence	92798-92828	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF042352	Serratia marcescens strain 4TM plasmid pNDM_4TM, complete sequence	102595-102625	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MF042357	Serratia marcescens strain 9580 plasmid pNDM_9580, complete sequence	98014-98044	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_MG764553	Klebsiella pneumoniae strain A3295 plasmid pA3295-KPC, complete sequence	124745-124775	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP031720	Klebsiella pneumoniae strain SCKP020003 plasmid pKPC2_020003, complete sequence	4947-4977	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MT108205	Klebsiella pneumoniae strain 71221 plasmid p71221-KPC, complete sequence	62547-62577	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	MT108212	Klebsiella pneumoniae strain 12478 plasmid p12478-KPC, complete sequence	97374-97404	9	0.71
NC_013941_3	3.1\|3462110\|31\|NC_013941\|CRISPRCasFinder,CRT	3462110-3462140	31	NZ_CP040535	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-KPC, complete sequence	35830-35860	9	0.71

1. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 2, identity: 0.943

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcgctgaa	Protospacer
 ***********.**********************

2. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 3, identity: 0.914

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
agataagacgcgtcagcgtcgcatcaggcgttaca	Protospacer
******************************.*. *

3. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 5, identity: 0.857

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgacagcggcgcatcaggcgctggt	Protospacer
 *********** ***** **************.

4. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 5, identity: 0.857

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
cgctaagacgcgccagcgtcgcatcaggcgttgag	Protospacer
 * *********.*****************.***.

5. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
agataagacgcgtcagcgtcgcatctggcataaac	Protospacer
************************* ***.. .*

6. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

7. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

8. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

9. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

10. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcaga	Protospacer
 ****************************.....*

11. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcttcaat	Protospacer
 **************************** ...*

12. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 ****************************...*.

13. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcggcagcgtcgcatcaggcatcgtg	Protospacer
 *********** ****************...* .

14. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcattagcgtcgcatcaggcagcgca	Protospacer
 **********.*.***************. .* *

15. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************.....

16. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. .

17. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*.

18. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************.....

19. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. .

20. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*.

21. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************.....

22. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. .

23. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*.

24. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************.....

25. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. .

26. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*.

27. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtctgcgtcgcatctggcaccggt	Protospacer
 ************* ********** ***.*.*.

28. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************.....

29. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgg	Protospacer
 ***********.****************.*. ..

30. spacer 2.1|3436204|30|NC_013941|CRISPRCasFinder,CRT matches to NC_015512 (Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence) position: , mismatch: 7, identity: 0.767

agcggcacgctggattgaacaaatccctgg----	CRISPR spacer
tgcggcacgatgggttgaacaaa----tggactt	Protospacer
 ******** ***.*********    ***

31. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
agataagacgcgccagcgtcgcatctggcatctgc	Protospacer
************.************ ***... .

32. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... .

33. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

34. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

35. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

36. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

37. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*.

38. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

39. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

40. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... .

41. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

42. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

43. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

44. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

45. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*.

46. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

47. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

48. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... .

49. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

50. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

51. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

52. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

53. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*.

54. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

55. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

56. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... .

57. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

58. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

59. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

60. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

61. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*.

62. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

63. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

64. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagatgcgccagcgtcgcatcaggtaattca	Protospacer
 *******.***.***************.. *  *

65. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgtatcaggcatctgc	Protospacer
 ********************.*******... .

66. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
 ***********.****************... ..

67. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgtatcaggcatctgc	Protospacer
 ********************.*******... .

68. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
 ***********.****************... ..

69. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP033467 (Enterobacter cloacae strain E3442 plasmid p3442-FRI-1, complete sequence) position: , mismatch: 8, identity: 0.742

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
cgccttcgtaatttttttgctgctcgctttt	Protospacer
* *  .. *********.*****.*******

70. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcatcgcatcaggcatcagc	Protospacer
 ************.***.***********.....

71. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... .

72. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... .

73. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... .

74. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... .

75. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
cgataagacgcgccagcgtcgcatcgggcatccgt	Protospacer
 ***********.************.***... .

76. spacer 1.1|71501|35|NC_013941|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcagacatcagc	Protospacer
 ***********.**************.*.....

77. spacer 2.1|3436204|30|NC_013941|CRISPRCasFinder,CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.7

agcggcacgctggattgaacaaatccctgg	CRISPR spacer
ataacgccgctggcttgaacaaatcccttt	Protospacer
*  .   ****** **************

78. spacer 2.3|3436326|30|NC_013941|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024200 (Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence) position: , mismatch: 9, identity: 0.7

cacaaaccgcccatcttcccgattactgca	CRISPR spacer
cacaaaccgcccatcttcgcggacaaccgg	Protospacer
****************** **. .* .  .

79. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP050075 (Enterobacter kobei strain 070 plasmid p070_A-KPC-2, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

80. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KY020154 (Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

81. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KY399975 (Enterobacter cloacae strain EClY2403 plasmid pNDM1_EClY2403, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

82. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KY399974 (Enterobacter cloacae strain EClY2402 plasmid pNDM1_EClY2402, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

83. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KY986974 (Citrobacter freundii strain 112298 plasmid p112298-tetA, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

84. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_LC511995 (Enterobacter hormaechei subsp. xiangfangensis strain MY146 plasmid pMY146-rmtE, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

85. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KY270850 (Klebsiella pneumoniae strain 12181 plasmid p12181-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

86. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KY270849 (Klebsiella pneumoniae strain 0716 plasmid p0716-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

87. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KR351290 (Klebsiella pneumoniae subsp. pneumoniae strain K351 plasmid pK351, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

88. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KJ812998 (Enterobacter cloacae isolate GN574 plasmid pNDM-Ec1GN574, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

89. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KP900016 (Leclercia adecarboxylata strain P10164 plasmid pP10164-NDM, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

90. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KP868647 (Enterobacter cloacae strain WCHECl-14653 plasmid pNDM1_EC14653, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

91. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP040123 (Klebsiella pneumoniae strain LSH-KPN148 plasmid pLSH-KPN148-1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

92. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026131 (Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

93. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP029731 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

94. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KC887916 (Escherichia coli strain ARL10/167 isolate EC4 plasmid pEC4-NDM-6, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

95. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KC887917 (Enterobacter cloacae isolate ECL3 plasmid pECL3-NDM-1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

96. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP036301 (Klebsiella pneumoniae subsp. pneumoniae strain WCHKP015093 plasmid pKPC2_015093, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

97. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to CP044029 (Klebsiella pneumoniae strain RJY9645 plasmid pY9645-166, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

98. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MN891681 (Klebsiella pneumoniae strain 14899 plasmid p14899-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

99. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP042480 (Citrobacter freundii strain C50 plasmid pC50_002, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

100. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NC_025184 (Klebsiella pneumoniae strain RJF866 plasmid pRJF866, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

101. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP042483 (Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

102. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP034324 (Klebsiella pneumoniae isolate KSH203 plasmid pKSH203-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

103. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP040547 (Klebsiella pneumoniae strain CR-HvKP5 plasmid pCR-HvKP5-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

104. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP022350 (Klebsiella michiganensis strain K516 plasmid pK516_NDM1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

105. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP039820 (Klebsiella pneumoniae strain C2414 plasmid pC2414-2-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

106. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP044259 (Klebsiella pneumoniae strain KP65 plasmid pKPC-2-KP65, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

107. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP039810 (Klebsiella pneumoniae strain C2660 plasmid pC2660-3-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

108. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to CP038003 (Klebsiella pneumoniae strain SCKP020009 plasmid pKPC2_020009, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

109. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP033404 (Klebsiella pneumoniae strain WCHKP115069 plasmid pKPC2_115069, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

110. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP036306 (Klebsiella pneumoniae strain WCHKP020098 plasmid pKPC2_020098, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

111. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to CP028790 (Klebsiella pneumoniae strain WCHKP020030 plasmid pKPC2_020030, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

112. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP018999 (Escherichia coli strain Ecol_AZ153 plasmid pECAZ153_KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

113. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP042553 (Enterobacter hormaechei strain C45 plasmid pC45_002, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

114. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MK933278 (Enterobacter hormaechei strain SCNJ07 plasmid pNDM-SCNJ07, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

115. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026141 (Klebsiella pneumoniae strain F127 plasmid pF127_1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

116. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026147 (Klebsiella pneumoniae strain F132 plasmid pF132_2, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

117. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026152 (Klebsiella pneumoniae strain F138 plasmid pF138_3, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

118. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP023725 (Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

119. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026137 (Klebsiella pneumoniae strain F77 plasmid pF77_1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

120. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP042519 (Citrobacter freundii strain E33 plasmid pE33_002, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

121. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MN823990 (Klebsiella pneumoniae strain 120314013 plasmid p314013-FII, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

122. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MN842295 (Klebsiella pneumoniae strain 08291 plasmid pW08291-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

123. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP018366 (Klebsiella pneumoniae strain Kp_Goe_62629 plasmid pKp_Goe_629-2, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

124. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_AP018674 (Klebsiella pneumoniae strain GSU10-3 plasmid pGSU10-3-3, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

125. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP023187 (Klebsiella michiganensis strain K518 plasmid pK518_NDM1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

126. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP043515 (Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

127. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to CP028547 (Klebsiella pneumoniae subsp. pneumoniae strain SCKP020143 plasmid pKPC2_020143, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

128. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_AP018835 (Enterobacter hormaechei subsp. xiangfangensis strain M324 plasmid pM324-NDM1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

129. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_AP018832 (Enterobacter hormaechei subsp. xiangfangensis strain M308 plasmid pM308-NDM1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

130. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP023942 (Klebsiella pneumoniae strain FDAARGOS_444 plasmid unnamed2) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

131. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MH909345 (Klebsiella pneumoniae strain N201205880 plasmid p205880-NDM, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

132. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MH477636 (Klebsiella pneumoniae strain 130504051 plasmid p504051-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

133. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MK036888 (Klebsiella pneumoniae strain 911021 plasmid p911021-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

134. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MK036886 (Klebsiella pneumoniae strain 283149 plasmid p283149-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

135. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF156695 (Klebsiella pneumoniae strain 1642 plasmid p1642-1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

136. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF168406 (Klebsiella pneumoniae strain 283747 plasmid p283747-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

137. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_LC511996 (Enterobacter hormaechei subsp. xiangfangensis strain MY458 plasmid pMY458-rmtE, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

138. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MG462729 (Escherichia coli strain AMA1742 plasmid pAMA1742, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

139. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MH325469 (Enterobacter hormaechei strain Ec13 plasmid pEc13, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

140. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026698 (Citrobacter koseri strain AR_0025 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

141. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP030133 (Klebsiella pneumoniae strain 160111 plasmid pIncFII_L111, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

142. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP025463 (Klebsiella pneumoniae strain F44 plasmid p44-2, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

143. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MT108206 (Klebsiella pneumoniae strain A1743 plasmid pA1743-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

144. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MT108207 (Klebsiella pneumoniae strain A1750 plasmid pA1750-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

145. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MT108208 (Klebsiella pneumoniae strain BJ20 plasmid pBJ20-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

146. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF042356 (Enterobacter cloacae strain 20ES plasmid pNDM_20ES, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

147. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF042359 (Serratia marcescens strain 7209 plasmid pNDM_7209, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

148. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP028541 (Klebsiella pneumoniae strain WCHKP2 plasmid pKPC2_020002, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

149. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP034756 (Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

150. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP016763 (Citrobacter freundii strain B38 plasmid pOZ172, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

151. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_KP893385 (Klebsiella pneumoniae subsp. pneumoniae strain KP1034 plasmid pKP1034, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

152. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026133 (Klebsiella pneumoniae strain F5 plasmid pF5_1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

153. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP033962 (Klebsiella pneumoniae strain L482 plasmid p3_L382, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

154. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP017059 (Citrobacter freundii strain SL151 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

155. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026241 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-e790, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

156. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP033394 (Klebsiella pneumoniae strain WCHKP015625 plasmid pCTXM65_015625, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

157. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP036362 (Klebsiella pneumoniae strain WCHKP2080 plasmid pKPC2_095080, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

158. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MT066418 (Klebsiella pneumoniae strain ST11 plasmid p158590-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

159. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP025952 (Klebsiella pneumoniae subsp. pneumoniae strain GD4 plasmid pKPGD4, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

160. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP036372 (Klebsiella pneumoniae strain WCHKP020037 plasmid pKPC2_020037, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

161. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MN891684 (Klebsiella pneumoniae strain BJ107 plasmid pBJ107-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

162. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MN891685 (Klebsiella pneumoniae strain BJ119 plasmid pBJ119-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

163. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026551 (Citrobacter sp. SL156 plasmid unnamed2) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

164. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP035386 (Enterobacter hormaechei strain S11_16 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

165. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP022697 (Citrobacter farmeri strain AUSMDU00008141 plasmid pAUSMDU8141-2, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

166. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP021538 (Escherichia coli strain AR_0119 plasmid unitig_4, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

167. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP035277 (Citrobacter freundii strain R17 plasmid pCFR17_1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

168. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP017850 (Klebsiella variicola strain GJ2 plasmid pKPGJ-2a, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

169. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP017285 (Klebsiella variicola strain GJ3 plasmid pKPGJ-3a, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

170. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP044035 (Klebsiella pneumoniae strain FDAARGOS_630 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

171. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP017283 (Klebsiella variicola strain GJ1 plasmid pKPGJ-1a, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

172. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NC_021501 (Klebsiella michiganensis E718 plasmid pKOX_NDM1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

173. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP023914 (Klebsiella pneumoniae strain FDAARGOS_439 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

174. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP040541 (Klebsiella pneumoniae strain CR-HvKP4 plasmid pCR-HvKP4-pKPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

175. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026584 (Klebsiella pneumoniae strain WCHKP649 plasmid pKPC2_095649, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

176. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP028582 (Klebsiella pneumoniae strain WCHKP36 plasmid pKPC2_020036, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

177. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP036366 (Klebsiella pneumoniae strain WCHKP115068 plasmid pCTXM65_115068, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

178. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MN842291 (Klebsiella pneumoniae strain 11935 plasmid p11935-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

179. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MN842292 (Klebsiella pneumoniae strain 12085 plasmid p12085-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

180. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to CP016403 (Klebsiella pneumoniae subsp. pneumoniae strain F5 plasmid pF5, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

181. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP016402 (Klebsiella pneumoniae subsp. pneumoniae strain F77 plasmid pF77, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

182. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP040598 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid pKpvST15_NDM-1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

183. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP014296 (Klebsiella pneumoniae strain KP38731 plasmid unnamed11 sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

184. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026025 (Klebsiella pneumoniae strain 11420 plasmid p11420-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

185. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP030345 (Enterobacter hormaechei strain AR_038 plasmid unnamed1) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

186. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP026589 (Klebsiella pneumoniae strain NUHL30457 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

187. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MN891678 (Klebsiella pneumoniae strain Kpn47 plasmid pKpn47-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

188. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MH909344 (Enterobacter cloacae strain 12949 plasmid p12949-FIIY, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

189. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MH255827 (Klebsiella pneumoniae subsp. pneumoniae strain SH9 plasmid pSH9-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

190. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MH917285 (Klebsiella pneumoniae strain 427113 plasmid p427113-Ct1/2, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

191. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MH909327 (Klebsiella pneumoniae strain 526316 plasmid p526316-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

192. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MK124610 (Citrobacter werkmanii strain Cb_CB1_SE1_NDM_08_2017 plasmid pCB1_SE1_NDM, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

193. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF133495 (Klebsiella pneumoniae strain 675920 plasmid p675920-1, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

194. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF168403 (Klebsiella pneumoniae strain 12139 plasmid p12139-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

195. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF168405 (Klebsiella pneumoniae strain 64917 plasmid p64917-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

196. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_LC511997 (Enterobacter hormaechei subsp. xiangfangensis strain MY460 plasmid pMY460-rmtE, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

197. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP032893 (Enterobacter kobei strain WCHEK045523 plasmid p1_045523, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

198. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP018455 (Klebsiella pneumoniae strain SWU01 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

199. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MT109193 (Klebsiella pneumoniae strain 156070 plasmid p156070-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

200. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP035537 (Klebsiella pneumoniae subsp. pneumoniae strain CCRI-22199 plasmid pKp199-2, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

201. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF042350 (Klebsiella pneumoniae strain 18ES plasmid pNDM_18ES, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

202. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF042351 (Serratia marcescens strain 12TM plasmid pNDM_12TM, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

203. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF042358 (Enterobacter cloacae strain 22ES plasmid pNDM_22ES, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

204. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF042352 (Serratia marcescens strain 4TM plasmid pNDM_4TM, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

205. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MF042357 (Serratia marcescens strain 9580 plasmid pNDM_9580, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

206. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_MG764553 (Klebsiella pneumoniae strain A3295 plasmid pA3295-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

207. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP031720 (Klebsiella pneumoniae strain SCKP020003 plasmid pKPC2_020003, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

208. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MT108205 (Klebsiella pneumoniae strain 71221 plasmid p71221-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

209. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to MT108212 (Klebsiella pneumoniae strain 12478 plasmid p12478-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

210. spacer 3.1|3462110|31|NC_013941|CRISPRCasFinder,CRT matches to NZ_CP040535 (Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-KPC, complete sequence) position: , mismatch: 9, identity: 0.71

ctcgactttaattttttcgctgcccgctttt	CRISPR spacer
tgccttcgtaatttttttgctgctcgctttt	Protospacer
. *  .. *********.*****.*******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

199837 : 276260

uncultured_Caudovirales_phage(20.0%)

tRNA,protease,plate,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295561.1\|199837_201190_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_001240896.1\|201219_203652_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_000758956.1\|203773_204259_+	molecular chaperone Skp	NA	NA	NA	NA
WP_001139282.1\|204262_205288_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_000210739.1\|205392_205848_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_000565966.1\|205851_206640_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_000139681.1\|206639_207788_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_000569419.1\|207784_208381_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	3.9e-26	40.0
WP_001294782.1\|208417_211900_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	2.2e-209	36.9
WP_000055741.1\|211912_212872_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_001020954.1\|212970_215112_+	lysine decarboxylase LdcC	NA	NA	NA	NA
WP_000901098.1\|215168_215558_+	VOC family protein	NA	NA	NA	NA
WP_000176547.1\|215622_216918_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_000062312.1\|216970_217231_-	Rho-binding antiterminator	NA	NA	NA	NA
WP_000417058.1\|217217_217418_-	YaeP family protein	NA	NA	NA	NA
WP_001185305.1\|217583_218129_+	YaeQ family protein	NA	NA	NA	NA
WP_000635545.1\|218125_218548_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_000239181.1\|218561_219272_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_001359023.1\|219471_220296_-	YaeF family permuted papain-like enzyme	NA	NA	NA	NA
WP_001260720.1\|220348_222067_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000094000.1\|222177_222885_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001202328.1\|222881_223286_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000874227.1\|223403_224219_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001294606.1\|224258_224912_-	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000594002.1\|224904_225936_-	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	5.5e-36	40.2
WP_001140190.1\|226123_226699_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000997018.1\|232455_233259_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	5.4e-39	36.6
WP_000648586.1\|233255_234170_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001230983.1\|234410_235211_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000211697.1\|235288_236059_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000644686.1\|236106_237465_-	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
WP_001052715.1\|237536_238292_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_001307587.1\|238325_239048_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000917883.1\|239044_239512_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
WP_001301976.1\|239576_240308_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	9.9e-40	39.5
WP_001086136.1\|240844_241645_+	hypothetical protein	NA	NA	NA	NA
WP_001302684.1\|242122_242572_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_000002702.1\|242574_243471_-	hypothetical protein	NA	NA	NA	NA
WP_001284959.1\|243491_243971_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_001087743.1\|243936_245346_-	ImpA family type VI secretion system protein	NA	NA	NA	NA
WP_001303798.1\|245356_248791_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_001240517.1\|248899_250312_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_000088854.1\|250316_251060_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_000614385.1\|251056_253840_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	7.3e-83	28.5
WP_000343294.1\|253848_254610_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_000246448.1\|254614_255946_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_001080153.1\|255948_256473_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_000348794.1\|257773_258856_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_000393844.1\|258819_260670_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_000611742.1\|260673_261087_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_000123970.1\|262619_262844_-	hypothetical protein	NA	NA	NA	NA
WP_000037397.1\|262878_263379_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_001142958.1\|264075_264594_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_000103342.1\|264803_266945_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.1e-25	25.0
WP_000509136.1\|267020_271253_+	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	2.1e-25	46.1
WP_001419315.1\|273868_274378_+	sel1 repeat family protein	NA	NA	NA	NA
WP_000420853.1\|275123_276260_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

298717 : 352976

Enterobacteria_phage(40.62%)

integrase,head,protease,portal,capsid,tail,holin,lysis,terminase

attL 314137:314150|attR 355227:355240

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000749881.1\|298717_299773_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	7.7e-118	60.9
WP_001285288.1\|300060_301164_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000893281.1\|301175_302429_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	4.4e-96	47.2
WP_000023577.1\|302633_303794_-\|integrase	site-specific integrase	K7P7R5	Enterobacteria_phage	7.2e-226	99.5
WP_001281200.1\|304107_304452_-	hypothetical protein	A0A0P0ZB93	Stx2-converting_phage	5.9e-59	99.1
WP_000103020.1\|304552_305317_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	4.5e-51	53.5
WP_001289865.1\|305313_305820_-	ead/Ea22-like family protein	K7P6T4	Enterobacteria_phage	3.1e-56	86.7
WP_000763359.1\|305816_306038_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	4.6e-33	94.5
WP_000188870.1\|306136_306352_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.0e-32	100.0
WP_000548536.1\|306428_306620_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	1.1e-25	96.8
WP_000149546.1\|306592_306775_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	9.1e-27	95.0
WP_000186844.1\|306771_307452_-	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	3.5e-132	99.6
WP_001418384.1\|307448_308234_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	1.8e-148	99.6
WP_000995449.1\|308239_308536_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	6.2e-49	99.0
WP_000372937.1\|308609_308753_-	host cell division inhibitory peptide Kil	A0A0N7C2U2	Escherichia_phage	1.2e-18	100.0
WP_001198861.1\|308721_308886_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
WP_000213973.1\|309109_309310_-	antirestriction Ral family protein	A0A0K2FJE6	Enterobacteria_phage	9.3e-33	98.5
WP_000281856.1\|309576_310059_+	superinfection exclusion B family protein	A4KWR7	Enterobacteria_phage	1.1e-87	100.0
WP_000340011.1\|310059_310383_-	antitermination protein	A4KWR8	Enterobacteria_phage	1.0e-52	99.1
WP_000618044.1\|310734_311139_-	hypothetical protein	A0A088CQ79	Enterobacteria_phage	5.6e-69	98.5
WP_000028392.1\|311135_311768_-	LexA family transcriptional regulator	K7P850	Enterobacteria_phage	1.6e-118	99.5
WP_001194218.1\|311871_312087_+	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	1.4e-31	100.0
WP_000251069.1\|312206_312500_+	lambda phage CII family protein	A2SY75	Escherichia_phage	3.7e-46	100.0
WP_000185433.1\|312532_313432_+	replication protein	K7P7F0	Enterobacteria_phage	2.5e-173	99.7
WP_000788868.1\|313428_314130_+	Replication protein P	A0A0P0ZD31	Stx2-converting_phage	2.9e-129	99.1
WP_000145894.1\|314126_314417_+	protein ren	A0A1I9LJP5	Stx_converting_phage	3.1e-45	97.9
314137:314150	attL	NA	NA	NA	NA
WP_000736913.1\|314490_314931_+	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.2e-80	100.0
WP_000153282.1\|314927_315455_+	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	2.8e-100	99.4
WP_001254239.1\|315451_315634_+	NinE family protein	A0A0P0ZDL7	Stx2-converting_phage	1.9e-29	100.0
WP_000566862.1\|315630_315801_+	protein ninF	K7PMD9	Enterobacterial_phage	9.3e-26	96.4
WP_001107957.1\|315793_316399_+	recombination protein NinG	A0A1I9LJQ2	Stx_converting_phage	8.1e-96	98.0
WP_001028867.1\|316395_317067_+	serine/threonine protein phosphatase	H6WZJ4	Escherichia_phage	1.1e-125	95.0
WP_000512794.1\|317057_317576_+	DUF1133 family protein	Q716B8	Shigella_phage	6.5e-94	97.1
WP_001419325.1\|318077_318209_+	DUF3927 family protein	NA	NA	NA	NA
WP_000026511.1\|318505_320347_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	3.6e-288	77.9
WP_024164617.1\|320784_321000_+\|holin	class II holin family protein	A0A0P0ZC45	Stx2-converting_phage	7.7e-33	98.6
WP_000075122.1\|320999_321497_+	lysozyme RrrD	A0A0N7KZA0	Stx2-converting_phage	1.3e-91	99.4
WP_072020783.1\|321713_321896_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	1.4e-14	93.3
WP_001302690.1\|322422_322737_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_013009113.1\|322817_323042_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.7e-20	92.5
WP_000235440.1\|323443_323953_+\|terminase	terminase small subunit	A0A1I9KFT4	Aeromonas_phage	7.2e-13	32.7
WP_024201835.1\|323924_325853_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.2e-262	66.2
WP_000258995.1\|325836_326043_+	gpW family protein	K7PM10	Enterobacteria_phage	4.6e-11	56.9
WP_000831800.1\|326039_327632_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.9e-185	61.6
WP_001253897.1\|327621_329127_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	6.1e-100	53.7
WP_000256840.1\|329163_329511_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.0e-22	58.1
WP_000522651.1\|329568_330597_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	2.7e-115	61.6
WP_000201530.1\|330648_331023_+	hypothetical protein	NA	NA	NA	NA
WP_001204539.1\|331015_331369_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	7.4e-41	68.4
WP_000155463.1\|331380_331914_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.0e-61	71.4
WP_000683050.1\|331910_332306_+\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	7.2e-69	96.2
WP_024201836.1\|332313_333054_+\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	4.4e-128	95.9
WP_000479164.1\|333069_333492_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.1e-70	96.4
WP_000459458.1\|333473_333908_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.5e-64	99.2
WP_000840217.1\|333900_336450_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	88.0
WP_000847332.1\|336446_336776_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	5.6e-59	99.1
WP_001152620.1\|336775_337474_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.4e-131	98.3
WP_013009116.1\|337479_338223_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.3e-147	96.8
WP_071813424.1\|338159_338792_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	3.2e-95	99.0
WP_000515634.1\|338852_342266_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	97.4
WP_001233141.1\|342336_342936_+	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	1.8e-103	92.5
WP_000741872.1\|342995_344312_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	3.5e-67	94.5
WP_001024023.1\|344313_344583_+\|tail	phage tail fiber C-terminal domain-containing protein	A0A1I9LJT0	Stx_converting_phage	8.4e-45	97.8
WP_001117986.1\|344694_345267_+	T3SS effector NleG family protein	H6WZN1	Escherichia_phage	1.6e-45	52.7
WP_001144082.1\|346006_346633_-	T3SS effector NleG family protein	B6DZZ5	Stx2-converting_phage	2.7e-25	37.2
WP_001132163.1\|346815_347406_+	T3SS effector guanine nucleotide exchange factor EspM2	NA	NA	NA	NA
WP_000950786.1\|348405_349386_+	NleB family type III secretion system effector arginine glycosyltransferase	Q8HAB2	Salmonella_phage	5.9e-88	50.5
WP_001130496.1\|351794_352976_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.1e-144	61.6
355227:355240	attR	NA	NA	NA	NA

DBSCAN-SWA_3

687060 : 755159

Enterobacteria_phage(53.57%)

tRNA,integrase,transposase,head,protease,portal,capsid,tail,lysis,terminase

attL 697221:697267|attR 746636:746682

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000912351.1\|687060_688446_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.9e-45	34.8
WP_001143558.1\|688481_689003_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000190288.1\|689110_689323_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_000729155.1\|689324_690191_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
WP_000776555.1\|690670_691213_+	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA
WP_000988382.1\|691432_692125_+	type 1 fimbria chaperone FimC	NA	NA	NA	NA
WP_001419152.1\|692155_694765_+	fimbrial biogenesis usher protein	NA	NA	NA	NA
WP_000691070.1\|694777_695785_+	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA
WP_001255114.1\|695795_696311_+	fimbria assembly protein	NA	NA	NA	NA
WP_001359679.1\|696313_696946_-	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA
697221:697267	attL	NA	NA	NA	NA
WP_000051902.1\|697280_698444_-\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.0e-200	86.6
WP_000488399.1\|698642_698921_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	2.1e-46	96.7
WP_000763385.1\|698968_699187_-	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	7.5e-36	100.0
WP_001443983.1\|699285_699567_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	7.2e-47	98.9
WP_013009139.1\|699577_699769_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	8.0e-26	98.4
WP_000149544.1\|699741_699924_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	6.9e-27	96.7
WP_000611720.1\|699920_700601_-	YqaJ viral recombinase family protein	B6DZ61	Enterobacteria_phage	6.7e-131	98.2
WP_000100847.1\|700597_701383_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995439.1\|701388_701685_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_000233576.1\|701760_701967_-	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000866321.1\|702447_702825_-	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	1.3e-30	49.2
WP_000380250.1\|702802_703864_-	hypothetical protein	Q6SE88	Lactobacillus_prophage	1.9e-63	41.7
WP_000858974.1\|703944_704634_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-92	75.0
WP_001067457.1\|704738_704969_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	3.8e-22	69.3
WP_001182899.1\|705038_705578_+	toxin YdaT domain-containing protein	M9NZI6	Enterobacteria_phage	2.0e-61	66.1
WP_000147876.1\|705574_706594_+	replication protein	A0A0M5M7Y1	Salmonella_phage	4.0e-111	64.4
WP_000788810.1\|706590_707292_+	Replication protein P	M1FJ72	Enterobacteria_phage	1.4e-128	98.7
WP_000145915.1\|707288_707591_+	protein ren	A0A0N6WES4	Escherichia_phage	1.1e-42	95.7
WP_001070451.1\|707658_707991_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_032102575.1\|708082_708190_+	hypothetical protein	NA	NA	NA	NA
WP_000709082.1\|708247_709774_+	recombinase family protein	Q3HQV4	Burkholderia_phage	7.9e-31	27.8
WP_001302427.1\|710238_710790_+	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_000881074.1\|710799_711597_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001303586.1\|711713_711815_+	hypothetical protein	NA	NA	NA	NA
WP_001054343.1\|711811_712267_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	1.8e-60	66.9
WP_000224916.1\|712266_712437_+	hypothetical protein	K7P7K0	Enterobacteria_phage	1.5e-12	67.9
WP_000774488.1\|712429_712720_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	4.3e-47	94.8
WP_001099712.1\|712716_713079_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	4.3e-60	96.5
WP_000971055.1\|713075_713216_+	YlcG family protein	K7PHH3	Enterobacteria_phage	1.1e-08	69.8
WP_001204780.1\|713301_713685_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	4.0e-56	84.2
WP_000737275.1\|713873_714956_-	porin OmpD	Q1MVN1	Enterobacteria_phage	8.9e-154	76.3
WP_000839596.1\|715545_715761_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001135277.1\|715760_716258_+	lysozyme RrrD	M1FJA0	Enterobacteria_phage	5.4e-90	97.0
WP_001228695.1\|716474_716657_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_000738421.1\|716747_717041_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	5.9e-44	90.7
WP_001307652.1\|717402_717597_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	9.7e-27	96.8
WP_000453618.1\|717985_718531_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	6.8e-94	97.8
WP_001027276.1\|718505_720431_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.2
WP_000198149.1\|720427_720634_+	gpW family protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001676384.1\|720630_722232_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	3.8e-310	99.2
WP_000123270.1\|722212_723532_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.6e-232	97.9
WP_001338090.1\|723541_723874_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.5e-55	99.1
WP_000063237.1\|723929_724955_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	6.6e-191	98.8
WP_000158927.1\|724996_725392_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	1.6e-55	92.4
WP_000752967.1\|725403_725757_+\|head,tail	head-tail joining protein	A0A2R9YJJ5	Escherichia_phage	8.4e-61	98.3
WP_000975093.1\|725768_726347_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.3e-79	97.4
WP_000683117.1\|726343_726739_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	6.5e-70	98.5
WP_024201838.1\|726746_727487_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	8.9e-129	96.7
WP_000479189.1\|727502_727925_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.3e-60	86.4
WP_000459456.1\|727906_728341_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_000840280.1\|728333_730913_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	92.9
WP_000847379.1\|730909_731239_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
WP_001152569.1\|731238_731937_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.3e-129	96.6
WP_000140754.1\|731942_732686_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.7e-149	98.0
WP_000090854.1\|732622_733225_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.2e-88	86.1
WP_000515282.1\|733285_736699_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	96.2
WP_001230375.1\|736768_737368_+	Ail/Lom family protein	A0A291AWV3	Escherichia_phage	5.7e-110	98.5
WP_064032193.1\|737432_740261_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0K2FIZ6	Escherichia_phage	3.2e-54	92.3
WP_000885575.1\|740260_740845_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.1e-101	93.8
WP_000239876.1\|740899_741568_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_001226375.1\|742113_743598_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_001201842.1\|743784_744738_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
WP_000361110.1\|745236_745821_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001298108.1\|745845_746283_-	acetyltransferase	NA	NA	NA	NA
WP_001177464.1\|746725_747487_-	DNA-binding transcriptional regulator EnvY	NA	NA	NA	NA
746636:746682	attR	NA	NA	NA	NA
WP_001224578.1\|747669_748560_-	DUF4434 family protein	NA	NA	NA	NA
WP_001301880.1\|748560_751533_-	bacteriophage adsorption protein NfrA	NA	NA	NA	NA
WP_000383932.1\|751519_753757_-	phage adsorption protein NrfB	NA	NA	NA	NA
WP_000420897.1\|754022_755159_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

980788 : 1026322

Enterobacteria_phage(44.44%)

integrase,protease,portal,tail,holin,lysis,terminase

attL 971318:971332|attR 985756:985770

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
971318:971332	attL	NA	NA	NA	NA
WP_000533643.1\|980788_981859_-\|integrase	tyrosine-type recombinase/integrase	K7P6P6	Enterobacteria_phage	3.9e-202	100.0
WP_001303849.1\|981836_982055_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
WP_000545728.1\|982094_982262_-	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	1.3e-27	98.2
WP_000120060.1\|982504_983107_+	hypothetical protein	NA	NA	NA	NA
WP_000763358.1\|983317_983539_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	1.6e-33	95.9
WP_000188870.1\|983637_983853_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.0e-32	100.0
WP_000548536.1\|983929_984121_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	1.1e-25	96.8
WP_000682316.1\|984093_984276_-	DUF1317 domain-containing protein	A0A0P0ZAS9	Stx2-converting_phage	4.1e-27	95.0
WP_000186844.1\|984272_984953_-	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	3.5e-132	99.6
WP_000995449.1\|985741_986038_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	6.2e-49	99.0
985756:985770	attR	NA	NA	NA	NA
WP_000372937.1\|986111_986255_-	host cell division inhibitory peptide Kil	A0A0N7C2U2	Escherichia_phage	1.2e-18	100.0
WP_001198861.1\|986223_986388_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
WP_000065351.1\|986460_986829_-	DUF2528 family protein	M1FPD2	Enterobacteria_phage	4.5e-65	99.2
WP_000392419.1\|987024_987474_-	hypothetical protein	I6RSN8	Salmonella_phage	3.3e-70	87.9
WP_000088205.1\|987758_988031_-	hypothetical protein	A0A0N7C217	Escherichia_phage	2.2e-40	98.9
WP_000478871.1\|988463_988748_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_000854876.1\|988759_989056_-	DUF1902 domain-containing protein	NA	NA	NA	NA
WP_096246228.1\|989228_989924_-	LexA family transcriptional regulator	A0A0N7BTS4	Escherichia_phage	4.3e-133	99.1
WP_000067727.1\|989998_990214_+	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	2.2e-35	100.0
WP_000438491.1\|990355_990655_+	hypothetical protein	A0A0P0ZBJ0	Stx2-converting_phage	2.0e-47	96.0
WP_000185506.1\|990687_991587_+	replication protein	A0A0K2FJ31	Enterobacteria_phage	5.5e-173	99.7
WP_000788868.1\|991583_992285_+	Replication protein P	A0A0P0ZD31	Stx2-converting_phage	2.9e-129	99.1
WP_000145894.1\|992281_992572_+	protein ren	A0A1I9LJP5	Stx_converting_phage	3.1e-45	97.9
WP_000736913.1\|992645_993086_+	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.2e-80	100.0
WP_001254218.1\|993082_993265_+	NinE family protein	Q8H9Z6	Enterobacteria_phage	4.8e-28	96.7
WP_000567000.1\|993261_993432_+	protein ninF	Q716C4	Shigella_phage	4.6e-25	98.2
WP_001108059.1\|993424_994045_+	recombination protein NinG	Q716C3	Shigella_phage	4.1e-95	96.6
WP_001028854.1\|994041_994707_+	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	5.0e-131	99.5
WP_000750160.1\|994918_995878_-	lipid A deacylase LpxR family protein	NA	NA	NA	NA
WP_032160865.1\|996215_996338_+	YlcG family protein	NA	NA	NA	NA
WP_001097238.1\|996352_997042_+	Q antiterminator encoded by prophage CP-933P	I6PDF8	Cronobacter_phage	1.5e-58	48.1
WP_001302581.1\|997227_997971_+	hypothetical protein	NA	NA	NA	NA
WP_000499454.1\|998056_998215_+	DUF3927 family protein	NA	NA	NA	NA
WP_012578864.1\|998295_998694_-	hypothetical protein	H6WZJ8	Escherichia_phage	6.9e-11	83.3
WP_000284524.1\|998836_999052_+\|holin	class II holin family protein	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
WP_000075144.1\|999051_999549_+	lysozyme RrrD	A0A1B5FP97	Escherichia_phage	1.9e-90	98.2
WP_000092264.1\|999545_1000013_+\|lysis	lysis protein	A0A291AWW3	Escherichia_phage	2.5e-76	98.1
WP_001139679.1\|1000000_1000153_+	hypothetical protein	K7PKL2	Enterobacteria_phage	8.9e-20	96.0
WP_000349509.1\|1000827_1001319_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.3e-72	87.2
WP_000934091.1\|1001318_1003421_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	96.6
WP_001072975.1\|1003417_1003630_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_000985949.1\|1003629_1005138_+\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	4.5e-289	99.6
WP_001097050.1\|1007196_1007520_+	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_001283153.1\|1007512_1007788_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_000677100.1\|1007799_1008378_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	9.4e-102	99.5
WP_001079422.1\|1008374_1008776_+\|tail	tail protein	A5LH34	Enterobacteria_phage	2.0e-71	98.5
WP_000211123.1\|1008786_1009530_+\|tail	phage tail protein	A5LH35	Enterobacteria_phage	9.5e-131	98.0
WP_001300035.1\|1009590_1009977_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
WP_001161009.1\|1009985_1010315_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_000371992.1\|1010286_1013352_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	99.0
WP_000447257.1\|1013351_1013681_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.5e-59	99.1
WP_001152339.1\|1013690_1014389_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	3.9e-134	99.1
WP_001419734.1\|1014394_1015138_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.5e-149	98.4
WP_000090845.1\|1015074_1015683_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.1e-100	94.1
WP_000515307.1\|1015743_1019157_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	96.7
WP_001230272.1\|1019226_1019826_+	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	7.7e-107	95.5
WP_000279047.1\|1019890_1021204_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	2.4e-76	97.7
WP_001101707.1\|1021205_1021475_+\|tail	phage tail fiber C-terminal domain-containing protein	B6DZB8	Enterobacteria_phage	9.3e-44	97.8
WP_000950813.1\|1021651_1022632_+	type III secretion system effector arginine glycosyltransferase NleB2	Q8HAB2	Salmonella_phage	2.9e-87	49.5
WP_115801843.1\|1022665_1023685_+\|protease	type III secretion system effector zinc metalloprotease NleC	NA	NA	NA	NA
WP_072127173.1\|1024181_1024343_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	3.9e-13	72.5
WP_000951026.1\|1024511_1025393_+	type III secretion system effector kinase NleH1-1	A5LH48	Enterobacteria_phage	8.6e-147	90.1
WP_001247931.1\|1025623_1026322_+\|protease	T3SS effector zinc metalloprotease NleD	NA	NA	NA	NA

DBSCAN-SWA_5

1574629 : 1643169

Stx2-converting_phage(32.65%)

integrase,transposase,head,protease,capsid,tail,holin,terminase

attL 1567520:1567533|attR 1584309:1584322

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1567520:1567533	attL	NA	NA	NA	NA
WP_000113678.1\|1574629_1575913_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21940	Phage_21	4.2e-102	51.1
WP_000113189.1\|1575890_1576139_-	excisionase	NA	NA	NA	NA
WP_000048548.1\|1576203_1578654_-	exonuclease	A0A192Y6E0	Salmonella_phage	3.5e-57	56.4
WP_001090200.1\|1578746_1578938_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449192.1\|1578934_1579123_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_000920491.1\|1579681_1579915_+	hypothetical protein	NA	NA	NA	NA
WP_000394552.1\|1579892_1580300_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	7.0e-11	37.8
WP_001171903.1\|1580322_1580541_-	hypothetical protein	NA	NA	NA	NA
WP_001240336.1\|1580613_1580913_-	hypothetical protein	NA	NA	NA	NA
WP_000787428.1\|1581177_1581585_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
WP_000912298.1\|1581661_1581889_+	transcriptional regulator	NA	NA	NA	NA
WP_000705622.1\|1581872_1582424_+	hypothetical protein	NA	NA	NA	NA
WP_000020556.1\|1582395_1583436_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	7.9e-91	87.2
WP_157825328.1\|1583347_1583890_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.5e-85	98.7
WP_000450692.1\|1583923_1584658_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	7.7e-109	84.7
1584309:1584322	attR	NA	NA	NA	NA
WP_001505071.1\|1584654_1584819_+	hypothetical protein	NA	NA	NA	NA
WP_001449026.1\|1585517_1586276_+	AcfC family adhesin Paa	NA	NA	NA	NA
WP_000961821.1\|1586554_1586767_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
WP_000975564.1\|1586985_1587246_+	hypothetical protein	NA	NA	NA	NA
WP_010917803.1\|1587315_1587594_+	hypothetical protein	I6PCV7	Cronobacter_phage	2.2e-11	48.4
WP_001265289.1\|1587595_1588651_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.9e-88	47.6
WP_000140002.1\|1588651_1589017_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.6e-38	67.5
WP_001059384.1\|1589013_1589703_+	antiterminator	I6PDF8	Cronobacter_phage	4.0e-59	51.1
WP_000023144.1\|1591221_1593072_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	95.9
WP_024164617.1\|1593510_1593726_+\|holin	class II holin family protein	A0A0P0ZC45	Stx2-converting_phage	7.7e-33	98.6
WP_000075132.1\|1593725_1594223_+	lysozyme RrrD	A0A0N7KZA0	Stx2-converting_phage	2.6e-92	100.0
WP_001208681.1\|1594439_1594625_+	membrane protein	A0A1U9AJA4	Stx1_converting_phage	2.9e-20	78.7
WP_001303878.1\|1595151_1595466_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_000074669.1\|1595547_1595772_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.7e-20	92.5
WP_001359494.1\|1595813_1596344_+	HNH endonuclease	H6WZK7	Escherichia_phage	2.6e-90	92.6
WP_001419048.1\|1596459_1597023_+\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	9.2e-86	94.1
WP_001417827.1\|1597019_1598681_+\|terminase	terminase large subunit	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	99.3
WP_000173096.1\|1598744_1598864_+	hypothetical protein	A0A0P0ZAJ3	Stx2-converting_phage	1.6e-11	89.7
WP_085959019.1\|1598884_1600097_+\|transposase	IS3-like element ISEc31 family transposase	Q716C2	Shigella_phage	7.5e-101	57.4
WP_143714088.1\|1600113_1601943_+\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	98.2
WP_001063105.1\|1601987_1602209_+	hypothetical protein	H6WZL1	Escherichia_phage	4.6e-33	93.2
WP_000125996.1\|1604735_1605062_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDA0	Stx2-converting_phage	1.6e-53	99.1
WP_001007889.1\|1605072_1605423_+\|head	phage head closure protein	A0A0P0ZDP7	Stx2-converting_phage	2.7e-59	100.0
WP_000573390.1\|1605419_1605866_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	99.3
WP_000141141.1\|1605862_1606207_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	3.6e-56	98.2
WP_001275473.1\|1606273_1606990_+\|tail	tail protein	A0A0P0ZD29	Stx2-converting_phage	3.3e-128	98.7
WP_001030057.1\|1606995_1607370_+\|tail	phage tail assembly chaperone	A0A0N7KZA2	Stx2-converting_phage	3.0e-64	99.2
WP_001453698.1\|1607465_1607675_+	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_000212946.1\|1607726_1610993_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	78.7
WP_000807954.1\|1610985_1611327_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	5.1e-63	100.0
WP_001419047.1\|1611326_1612025_+\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	1.3e-129	96.6
WP_014640511.1\|1612035_1612779_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	3.8e-148	98.4
WP_064761467.1\|1612724_1613354_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	1.2e-102	98.6
WP_000514949.1\|1613594_1617071_+	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	98.4
WP_085959019.1\|1617152_1618366_-\|transposase	IS3-like element ISEc31 family transposase	Q716C2	Shigella_phage	7.5e-101	57.4
WP_029783341.1\|1618384_1619023_+	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	5.2e-69	61.7
WP_000279047.1\|1619087_1620401_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	2.4e-76	97.7
WP_001023357.1\|1620402_1620672_+\|tail	phage tail fiber C-terminal domain-containing protein	A0A2R2Z347	Escherichia_phage	3.8e-45	100.0
WP_000767050.1\|1620892_1621435_+	hypothetical protein	Q9LA55	Enterobacteria_phage	8.4e-52	68.6
WP_106423857.1\|1621379_1621574_+\|tail	phage tail fiber C-terminal domain-containing protein	A0A2R2Z347	Escherichia_phage	1.1e-09	87.2
WP_106409364.1\|1623583_1623706_+\|tail	phage tail fiber C-terminal domain-containing protein	Q687E5	Enterobacteria_phage	3.8e-05	91.3
WP_000950979.1\|1623812_1624724_+	type III secretion system effector kinase NleH1-2	A5LH48	Enterobacteria_phage	3.0e-134	82.2
WP_000938103.1\|1624789_1625359_+	T3SS effector caspase inhibitor NleF	NA	NA	NA	NA
WP_001079491.1\|1627818_1628325_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_001056491.1\|1628370_1628871_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_000807651.1\|1628956_1629136_-	general stress protein	NA	NA	NA	NA
WP_000443044.1\|1629516_1630323_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_000209521.1\|1630322_1631516_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_000983857.1\|1631527_1632889_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	4.3e-36	40.2
WP_000763520.1\|1632889_1634485_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	5.0e-52	38.2
WP_001194629.1\|1634484_1636047_-	anthranilate synthase component I	NA	NA	NA	NA
WP_001700591.1\|1636138_1636183_-	trp operon leader peptide	NA	NA	NA	NA
WP_001285675.1\|1636320_1637202_+	5'-3' exoribonuclease	NA	NA	NA	NA
WP_001295575.1\|1637198_1637819_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_001419072.1\|1637846_1639430_+	DUF2207 domain-containing protein	NA	NA	NA	NA
WP_001291216.1\|1639642_1640515_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_001278896.1\|1640554_1641145_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_000559268.1\|1641141_1641900_-	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	6.7e-07	23.9
WP_000422055.1\|1642119_1643169_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5

DBSCAN-SWA_6

1726810 : 1778957

Escherichia_phage(39.34%)

tRNA,integrase,protease,portal,tail,holin,terminase

attL 1727635:1727650|attR 1781231:1781246

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000628061.1\|1726810_1728043_-	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	3.1e-17	39.5
1727635:1727650	attL	NA	NA	NA	NA
WP_000387388.1\|1728297_1729281_+	zinc transporter ZntB	NA	NA	NA	NA
WP_001625136.1\|1729555_1729726_+	hypothetical protein	NA	NA	NA	NA
WP_000123746.1\|1729758_1731132_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_000662472.1\|1731260_1732196_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.7e-145	98.4
WP_000040839.1\|1732247_1733483_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	3.8e-241	99.5
WP_000079604.1\|1733484_1733700_-	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_001302840.1\|1733799_1733988_-	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	5.5e-27	98.4
WP_001443846.1\|1734025_1734175_-	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	2.5e-22	95.9
WP_000166313.1\|1734230_1735040_-	recombination protein RecT	A0A1P8DTF2	Proteus_phage	4.0e-106	71.5
WP_000102213.1\|1735032_1737705_-	exodeoxyribonuclease VIII	Q9QF34	Lambdoid_phage	6.2e-172	96.1
WP_001452559.1\|1737804_1738080_-	hypothetical protein	A0A0U2QW85	Escherichia_phage	3.7e-40	92.3
WP_000245528.1\|1738154_1738331_-	hypothetical protein	A0A0U2SHB5	Escherichia_phage	9.7e-26	93.1
WP_000560227.1\|1738324_1738546_-	cell division protein FtsZ	A0A0U2RTC4	Escherichia_phage	1.2e-36	95.9
WP_000379547.1\|1738954_1739107_-	DUF1391 family protein	M4QQ57	Salicola_phage	1.0e-07	55.3
WP_000948458.1\|1739424_1739901_-	DNA-binding transcriptional repressor RacR	A0A2D1GNH0	Pseudomonas_phage	2.2e-11	53.4
WP_000712068.1\|1740024_1740282_+	transcriptional regulator	A0A0R6PH31	Moraxella_phage	6.4e-10	44.9
WP_000693796.1\|1740343_1740766_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	1.7e-68	92.9
WP_013009175.1\|1740843_1741632_+	hypothetical protein	G9L6A8	Escherichia_phage	6.1e-43	65.7
WP_000789014.1\|1741638_1742379_+	ATP-binding protein	V5UQI5	Shigella_phage	2.3e-116	83.3
WP_000450850.1\|1742404_1743175_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.9e-86	68.4
WP_001118161.1\|1743190_1743586_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.0e-30	51.4
WP_000206794.1\|1743642_1744227_+	DUF551 domain-containing protein	A0A0P0ZD75	Stx2-converting_phage	5.5e-33	83.5
WP_001278450.1\|1744342_1744447_+	hypothetical protein	NA	NA	NA	NA
WP_000128513.1\|1744635_1744848_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	3.6e-27	92.9
WP_000940306.1\|1745408_1746008_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	5.9e-107	93.0
WP_000228035.1\|1746007_1746298_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	7.4e-47	87.5
WP_000640158.1\|1746294_1746849_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	5.0e-68	69.1
WP_000874263.1\|1747770_1749717_+	DUF1737 domain-containing protein	A0A075M342	Escherichia_Stx1-converting_recombinant_phage	0.0e+00	97.5
WP_014640514.1\|1749854_1750034_+	DUF1378 family protein	A0A0P0ZCJ7	Stx2-converting_phage	1.1e-24	98.3
WP_001290217.1\|1750074_1750347_+	DUF826 domain-containing protein	A0A0P0ZC09	Stx2-converting_phage	4.8e-24	100.0
WP_000284510.1\|1750423_1750639_+\|holin	class II holin family protein	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_000087714.1\|1750643_1751177_+	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.0e-102	99.4
WP_001056883.1\|1751451_1752021_+	hypothetical protein	A0A2R2Z339	Escherichia_phage	1.5e-104	99.5
WP_000455406.1\|1752020_1752170_+	hypothetical protein	A0A0P0ZFU6	Escherichia_phage	2.4e-17	100.0
WP_123005736.1\|1752397_1752604_+	hypothetical protein	H6WRZ6	Salmonella_phage	2.9e-29	94.1
WP_001139680.1\|1752632_1752785_+	hypothetical protein	K7PKL2	Enterobacteria_phage	1.2e-21	100.0
WP_000343114.1\|1752863_1753151_+	hypothetical protein	A0A1P8DTP0	Salmonella_phage	3.1e-29	60.0
WP_171815854.1\|1753227_1753404_-	hypothetical protein	NA	NA	NA	NA
WP_000373410.1\|1753664_1754141_+	DUF1441 family protein	Q8VNN8	Enterobacteria_phage	9.5e-84	99.4
WP_001077622.1\|1754137_1756261_+\|terminase	phage terminase large subunit family protein	Q9EYD1	Enterobacteria_phage	0.0e+00	99.9
WP_000102415.1\|1756257_1756470_+	hypothetical protein	S5MBY8	Escherichia_phage	3.0e-29	98.6
WP_000974545.1\|1756469_1757972_+\|portal	phage portal protein	Q9EYD2	Enterobacteria_phage	1.4e-290	99.8
WP_001114424.1\|1757916_1759941_+\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	99.8
WP_001097065.1\|1760028_1760355_+	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
WP_001281348.1\|1760347_1760629_+	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	2.1e-46	100.0
WP_000974958.1\|1760631_1761255_+\|tail	phage tail protein	Q8VNN3	Enterobacteria_phage	8.9e-106	100.0
WP_000682716.1\|1761267_1761666_+\|tail	tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
WP_000235038.1\|1761673_1762426_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	2.9e-135	99.6
WP_000479043.1\|1762439_1762862_+\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	5.1e-73	100.0
WP_000532073.1\|1762888_1763197_+\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	1.3e-54	100.0
WP_000918245.1\|1763240_1765886_+\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	93.6
WP_000847280.1\|1765882_1766212_+\|tail	phage tail protein	S5MW28	Escherichia_phage	1.2e-58	99.1
WP_013009178.1\|1766211_1766910_+\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	9.9e-130	96.1
WP_024201844.1\|1766920_1767664_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	5.0e-148	98.8
WP_143714090.1\|1767609_1768242_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	2.5e-95	90.5
WP_000514801.1\|1768489_1771963_+	host specificity protein J	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	96.2
WP_001253753.1\|1772030_1772630_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	6.7e-111	99.0
WP_000279066.1\|1772694_1773924_+\|tail	prophage tail fiber N-terminal domain-containing protein	B6DZB7	Enterobacteria_phage	8.5e-76	92.9
WP_001023994.1\|1773925_1774195_+\|tail	phage tail fiber C-terminal domain-containing protein	A0A0P0ZCV7	Stx2-converting_phage	1.9e-44	96.6
WP_001131657.1\|1774307_1774883_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	1.8e-89	88.9
WP_013009182.1\|1774955_1775585_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	5.7e-76	90.8
WP_001143784.1\|1775666_1776308_+	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	6.8e-109	100.0
WP_001295593.1\|1777248_1777683_-	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.4e-28	52.8
WP_000837948.1\|1777823_1778957_-	porin OmpN	Q1MVN1	Enterobacteria_phage	1.1e-117	58.8
1781231:1781246	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1960027 : 2017604

Enterobacteria_phage(35.09%)

integrase,transposase,head,portal,capsid,tail,holin,terminase

attL 1993630:1993645|attR 2025771:2025786

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000214712.1\|1960027_1960231_+	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2
WP_000527769.1\|1960266_1961727_-	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	1.9e-42	29.6
WP_001120551.1\|1963230_1963473_+	DinI-like family protein	Q687E4	Enterobacteria_phage	2.4e-27	83.3
WP_000343700.1\|1963522_1964731_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.6e-47	45.7
WP_001121226.1\|1964880_1965531_-	type III secretion system effector NleG7	B6ETE1	Enterobacteria_phage	4.1e-122	99.5
WP_001131642.1\|1966241_1966817_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	4.1e-57	60.5
WP_001023389.1\|1966929_1967199_-\|tail	phage tail fiber C-terminal domain-containing protein	B6DZB8	Enterobacteria_phage	6.4e-45	98.9
WP_000279047.1\|1967200_1968514_-\|tail	phage tail protein	H6WZM9	Escherichia_phage	2.4e-76	97.7
WP_001230373.1\|1968578_1969178_-	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	3.5e-107	96.0
WP_071781836.1\|1972684_1973317_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	1.6e-94	97.6
WP_000140733.1\|1973253_1973997_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	4.3e-139	93.4
WP_001152612.1\|1974001_1974700_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.1e-132	98.7
WP_000847345.1\|1974699_1975029_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
WP_000082491.1\|1975025_1977605_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	84.7
WP_000533425.1\|1977585_1977999_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.7e-42	82.2
WP_000479105.1\|1978025_1978457_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
WP_000235022.1\|1978470_1979223_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	4.6e-133	98.0
WP_000683056.1\|1979230_1979626_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	4.4e-58	81.7
WP_000975025.1\|1979622_1980156_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	3.8e-57	65.1
WP_001204558.1\|1980170_1980524_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.9e-41	69.2
WP_000201503.1\|1980516_1980900_-	hypothetical protein	NA	NA	NA	NA
WP_000522623.1\|1980951_1981980_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	5.0e-114	61.9
WP_000256723.1\|1982037_1982385_-\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
WP_001253920.1\|1982421_1983927_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.7e-100	54.0
WP_000831797.1\|1983916_1985509_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.1e-183	60.7
WP_000259003.1\|1985505_1985712_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	2.3e-10	56.9
WP_001418004.1\|1985695_1987624_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	3.9e-261	66.0
WP_000235436.1\|1987595_1988105_-\|terminase	terminase small subunit	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_000105085.1\|1988499_1988727_+	DUF3950 domain-containing protein	A0A0P0ZCA1	Stx2-converting_phage	1.1e-34	98.7
WP_012816791.1\|1989151_1989337_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_000539792.1\|1989564_1989711_-	hypothetical protein	A0A0P0ZE99	Stx2-converting_phage	2.6e-16	100.0
WP_001056806.1\|1989710_1990280_-	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
WP_000992088.1\|1990550_1991084_-	lysozyme	B6DZ92	Enterobacteria_phage	5.6e-101	98.3
WP_000731255.1\|1991134_1991479_-	YdfR family protein	B6DZ91	Enterobacteria_phage	5.9e-59	99.1
WP_000284518.1\|1991483_1991699_-\|holin	class II holin family protein	Q6H9V8	Enterobacteria_phage	2.0e-33	100.0
WP_001289717.1\|1991774_1992044_-	DUF826 domain-containing protein	A0A2R2Z348	Escherichia_phage	8.2e-08	75.3
WP_001213059.1\|1992081_1992264_-	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	1.0e-14	67.8
WP_000023170.1\|1992411_1994349_-	SASA family carbohydrate esterase	Q6H9W1	Enterobacteria_phage	2.5e-292	76.8
1993630:1993645	attL	NA	NA	NA	NA
WP_000762928.1\|1995427_1996249_-	antitermination protein	K7P7B9	Enterobacteria_phage	4.1e-82	61.2
WP_001217410.1\|1996245_1996620_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.1e-33	62.7
WP_001265028.1\|1996632_1997679_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.4e-108	54.5
WP_001417850.1\|1997680_1997959_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.6e-11	46.9
WP_001302544.1\|1997899_1998085_+	hypothetical protein	NA	NA	NA	NA
WP_000018421.1\|1998126_1998339_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	8.1e-27	92.9
WP_001278454.1\|1998528_1998633_-	hypothetical protein	NA	NA	NA	NA
WP_000207995.1\|1998748_1999618_-	DUF551 domain-containing protein	A0A1U9AJ59	Stx1_converting_phage	1.0e-120	77.2
WP_000224233.1\|1999628_1999892_-	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
WP_000256993.1\|1999893_2000112_-	DUF4014 family protein	A0A1I9LJM2	Stx_converting_phage	1.1e-26	86.1
WP_000935420.1\|2000144_2000357_-	hypothetical protein	A0A2R2Z310	Escherichia_phage	5.8e-33	94.3
WP_001151255.1\|2000783_2001209_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.8e-63	91.4
WP_000770544.1\|2001249_2002215_-	hypothetical protein	U5P0A0	Shigella_phage	4.3e-59	65.0
WP_000693859.1\|2002239_2002665_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000471546.1\|2002661_2002877_-	hypothetical protein	NA	NA	NA	NA
WP_000104592.1\|2002926_2003643_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	6.7e-49	40.8
WP_001414141.1\|2003908_2004061_+	DUF1391 family protein	M4QQ57	Salicola_phage	1.0e-07	55.3
WP_000559928.1\|2004175_2004691_-	hypothetical protein	NA	NA	NA	NA
WP_000449178.1\|2005239_2005428_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001090185.1\|2005424_2005628_+	DUF1482 family protein	NA	NA	NA	NA
WP_000048562.1\|2005707_2008179_+	exonuclease	K7PLW7	Enterobacteria_phage	1.4e-53	57.4
WP_000005551.1\|2008250_2008502_+	excisionase family protein	S4TND0	Salmonella_phage	2.9e-15	50.0
WP_001206152.1\|2008521_2009817_+\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	7.4e-155	62.3
WP_001531709.1\|2009842_2009947_-	hypothetical protein	NA	NA	NA	NA
WP_000836042.1\|2010004_2011024_-	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	1.1e-17	26.5
WP_001358608.1\|2011035_2012250_-	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	3.1e-46	29.0
WP_001358609.1\|2012455_2012782_-	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
WP_000705189.1\|2012916_2013258_+	DUF1283 family protein	NA	NA	NA	NA
WP_001138581.1\|2013292_2013853_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_001303515.1\|2013855_2014566_-	YnfC family lipoprotein	NA	NA	NA	NA
WP_000778147.1\|2014673_2014979_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_000041706.1\|2015177_2017604_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.5e-212	48.8
2025771:2025786	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2149819 : 2195331

Enterobacteria_phage(72.0%)

tRNA,integrase,head,portal,capsid,tail,holin,plate,terminase

attL 2152222:2152246|attR 2187973:2187997

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000029463.1\|2149819_2150569_-	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	9.3e-09	28.2
WP_001154193.1\|2150568_2151120_-	bifunctional thioredoxin/glutathione peroxidase	NA	NA	NA	NA
WP_000956513.1\|2151182_2152163_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
2152222:2152246	attL	NA	NA	NA	NA
WP_000416306.1\|2152352_2152748_-	hypothetical protein	NA	NA	NA	NA
WP_001247208.1\|2152758_2153694_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4RTQ0	Salmonella_phage	5.6e-80	50.8
WP_000904674.1\|2153782_2154091_-	helix-turn-helix transcriptional regulator	A0A0M5M1I9	Salmonella_phage	8.7e-22	52.1
WP_001151410.1\|2154187_2154466_+	hypothetical protein	NA	NA	NA	NA
WP_000917809.1\|2154480_2154819_+	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	2.3e-52	87.1
WP_000158971.1\|2154829_2155117_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	7.8e-33	76.8
WP_000357028.1\|2155128_2155371_+	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	3.4e-37	97.5
WP_000021659.1\|2155367_2155481_+	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	4.0e-09	91.9
WP_000543034.1\|2155574_2155985_+	hypothetical protein	NA	NA	NA	NA
WP_000985157.1\|2156008_2156212_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	2.5e-25	83.6
WP_000153700.1\|2156208_2156475_+	winged helix-turn-helix transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	2.0e-30	75.9
WP_000104296.1\|2156471_2156771_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	2.8e-41	89.9
WP_013009203.1\|2156782_2157400_+	ash family protein	S5MQL6	Escherichia_phage	2.1e-06	37.8
WP_000564222.1\|2157396_2157786_+	hypothetical protein	NA	NA	NA	NA
WP_001288338.1\|2157782_2160623_+	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	88.8
WP_000686524.1\|2160699_2161659_+	plasmid segregation protein ParM	A0A0A7NPX4	Enterobacteria_phage	9.9e-181	99.7
WP_000211272.1\|2161663_2161975_+	plasmid partitioning/stability family protein	A0A0A7NPT5	Enterobacteria_phage	2.6e-50	98.1
WP_001163778.1\|2162038_2162371_+	carboxylate--amine ligase	A0A0A7NV51	Enterobacteria_phage	7.1e-54	98.2
WP_001080490.1\|2162367_2162706_+	hypothetical protein	A0A0A7NRY2	Enterobacteria_phage	1.6e-56	100.0
WP_000087800.1\|2163197_2164244_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.3e-205	99.7
WP_000613756.1\|2164243_2165995_-	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	0.0e+00	98.3
WP_001262673.1\|2166149_2166986_+\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	2.7e-150	100.0
WP_001055104.1\|2167009_2168062_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	1.3e-194	97.7
WP_000632329.1\|2168107_2168908_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	7.3e-129	90.6
WP_000063081.1\|2169010_2169505_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	4.6e-89	98.8
WP_000864903.1\|2169504_2169705_+\|tail	tail protein X	A0A0A7NV57	Enterobacteria_phage	1.0e-31	98.5
WP_013009204.1\|2169707_2170031_+\|holin	phage holin family protein	A0A0A7NRY9	Enterobacteria_phage	2.3e-49	98.1
WP_000072327.1\|2170027_2170420_+	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	5.8e-71	100.0
WP_013009205.1\|2170416_2170824_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	1.6e-63	95.6
WP_000920594.1\|2170961_2171429_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.6e-86	100.0
WP_000356334.1\|2171421_2172057_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	2.4e-114	99.5
WP_077626244.1\|2172068_2172635_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.2e-98	96.8
WP_001067548.1\|2172652_2172982_+	GPW/gp25 family protein	A0A0A7NQ90	Enterobacteria_phage	2.2e-55	100.0
WP_001111942.1\|2172985_2173882_+\|plate	baseplate J/gp47 family protein	A0A0A7NPY5	Enterobacteria_phage	1.1e-154	98.0
WP_000071724.1\|2173874_2174483_+\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	1.5e-86	74.9
WP_059279521.1\|2176054_2176558_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	6.0e-44	55.2
WP_033875510.1\|2176586_2177045_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.3e-42	56.0
WP_001057722.1\|2177051_2177663_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	7.2e-84	79.5
WP_000503763.1\|2177662_2178121_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	5.3e-39	53.1
WP_137531352.1\|2178131_2178599_-\|tail	tail fiber protein	K7PH60	Enterobacterial_phage	9.1e-47	70.6
WP_001165544.1\|2178631_2179231_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	2.6e-86	86.3
WP_000979954.1\|2179257_2179746_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.6e-86	100.0
WP_000853426.1\|2179758_2182566_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	91.7
WP_000333503.1\|2182552_2182708_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	9.7e-22	96.1
WP_000651572.1\|2182716_2183091_-\|tail	tail protein	A0A0A7NPZ0	Enterobacteria_phage	9.0e-37	73.2
WP_000290447.1\|2183146_2183659_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	9.2e-93	99.4
WP_000005363.1\|2183658_2184843_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	4.3e-226	99.5
WP_000132801.1\|2185000_2186110_+	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	6.3e-195	94.3
WP_001057122.1\|2186304_2186970_+	hypothetical protein	NA	NA	NA	NA
WP_000488101.1\|2187119_2187380_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_000078916.1\|2187570_2187711_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	1.5e-18	97.8
WP_001229265.1\|2188014_2188314_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
2187973:2187997	attR	NA	NA	NA	NA
WP_000672314.1\|2188318_2190706_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_000018588.1\|2190720_2191704_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.1e-33	38.5
WP_001386830.1\|2191986_2192031_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_000124850.1\|2192153_2192510_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_001124225.1\|2192562_2192760_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_001700733.1\|2192856_2193399_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.3e-15	32.9
WP_001144201.1\|2193402_2195331_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	9.4e-130	37.1

DBSCAN-SWA_9

2440336 : 2516409

Enterobacteria_phage(39.02%)

integrase,transposase,head,protease,portal,capsid,tail,holin,terminase

attL 2459261:2459276|attR 2523230:2523245

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001023389.1\|2440336_2440606_-\|tail	phage tail fiber C-terminal domain-containing protein	B6DZB8	Enterobacteria_phage	6.4e-45	98.9
WP_001230272.1\|2441986_2442586_-	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	7.7e-107	95.5
WP_000515115.1\|2442653_2446130_-	host specificity protein J	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	94.0
WP_000649829.1\|2446263_2446791_+	superoxide dismutase family protein	Q9MC02	Salmonella_phage	1.8e-59	60.5
WP_143714091.1\|2446981_2447620_-\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	1.1e-95	88.2
WP_013009225.1\|2447559_2448300_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	3.8e-140	92.6
WP_001357740.1\|2448305_2449004_-\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	8.1e-132	98.7
WP_000847304.1\|2449003_2449333_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	2.2e-55	95.4
WP_000082475.1\|2449329_2451909_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	81.1
WP_000533419.1\|2451889_2452303_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.0e-41	81.2
WP_000479105.1\|2452329_2452761_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
WP_000235021.1\|2452774_2453527_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	4.6e-133	98.4
WP_000683076.1\|2453534_2453930_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	6.7e-59	83.2
WP_000974984.1\|2453926_2454460_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.9e-56	65.6
WP_001204554.1\|2454475_2454829_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.5e-41	70.1
WP_000201512.1\|2454821_2455205_-	DNA-packaging protein FI	NA	NA	NA	NA
WP_000522623.1\|2455256_2456285_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	5.0e-114	61.9
WP_000256723.1\|2456342_2456690_-\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
WP_001253920.1\|2456726_2458232_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.7e-100	54.0
WP_000831797.1\|2458221_2459814_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.1e-183	60.7
2459261:2459276	attL	NA	NA	NA	NA
WP_000259002.1\|2459810_2460017_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_024201851.1\|2460000_2461929_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.3e-259	65.9
WP_000235436.1\|2461900_2462410_-\|terminase	terminase small subunit	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_001329960.1\|2462811_2462997_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	3.2e-19	90.4
WP_000347012.1\|2463133_2463271_-	hypothetical protein	NA	NA	NA	NA
WP_000736381.1\|2463687_2463882_-	hypothetical protein	NA	NA	NA	NA
WP_122991286.1\|2463967_2464153_-	hypothetical protein	A0A0P0ZCT3	Stx2-converting_phage	6.0e-18	96.7
WP_032140280.1\|2464374_2464461_-	hypothetical protein	NA	NA	NA	NA
WP_001092850.1\|2465015_2465549_-	lysozyme	Q6H9V6	Enterobacteria_phage	3.9e-102	97.7
WP_000731214.1\|2465591_2466581_-	YdfR family protein	Q08JA0	Stx2-converting_phage	6.8e-108	64.4
WP_000411813.1\|2466585_2466792_-\|holin	class II holin family protein	Q6H9V8	Enterobacteria_phage	1.2e-30	97.1
WP_000874327.1\|2467084_2468935_-	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	96.3
WP_000261910.1\|2469702_2470416_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000265268.1\|2471036_2471855_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000090265.1\|2472007_2472379_-	antitermination protein	Q777W5	Enterobacteria_phage	1.0e-53	84.0
WP_001217436.1\|2472368_2472740_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.3e-35	63.7
WP_001265288.1\|2472752_2473802_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	2.0e-110	54.9
WP_010917803.1\|2473803_2474082_-	hypothetical protein	I6PCV7	Cronobacter_phage	2.2e-11	48.4
WP_000975564.1\|2474151_2474412_-	hypothetical protein	NA	NA	NA	NA
WP_000401168.1\|2474566_2475670_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_001004959.1\|2475650_2476301_-	hypothetical protein	NA	NA	NA	NA
WP_000813254.1\|2476466_2476622_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_000101550.1\|2476993_2477953_-	SIR2 family protein	NA	NA	NA	NA
WP_001151172.1\|2478393_2478801_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.8e-62	92.5
WP_000054513.1\|2478841_2479807_-	hypothetical protein	U5P0A0	Shigella_phage	2.2e-55	59.6
WP_000705361.1\|2479787_2480309_-	hypothetical protein	NA	NA	NA	NA
WP_000476994.1\|2480292_2480520_-	transcriptional regulator	NA	NA	NA	NA
WP_001003381.1\|2480597_2481005_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.5e-24	46.2
WP_000379559.1\|2481197_2481350_+	DUF1391 family protein	M4QQ57	Salicola_phage	6.0e-08	55.3
WP_000559930.1\|2481463_2481979_-	hypothetical protein	NA	NA	NA	NA
WP_000449169.1\|2482520_2482709_+	cell division inhibitor	NA	NA	NA	NA
WP_000199480.1\|2482705_2482894_+	DUF1482 family protein	NA	NA	NA	NA
WP_000990641.1\|2482986_2485404_+	exonuclease	V5UQJ3	Shigella_phage	6.0e-174	60.1
WP_000094838.1\|2485462_2485666_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000533608.1\|2485665_2486691_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.9e-101	56.7
WP_001302302.1\|2486926_2487724_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_000480501.1\|2496457_2497510_-	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_000378596.1\|2497824_2499141_+	shikimate transporter	NA	NA	NA	NA
WP_001060244.1\|2499242_2500697_+	AMP nucleosidase	NA	NA	NA	NA
WP_000532909.1\|2501039_2501756_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001011000.1\|2504142_2505093_-	HTH-type transcriptional regulator Cbl	NA	NA	NA	NA
WP_001011474.1\|2505194_2506112_-	nitrogen assimilation transcriptional regulator NAC	NA	NA	NA	NA
WP_000986329.1\|2506568_2507504_-	L,D-transpeptidase	NA	NA	NA	NA
WP_001193830.1\|2507565_2508645_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_001295633.1\|2508656_2509400_-	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_000973176.1\|2509396_2509942_-	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA
WP_001419103.1\|2511613_2513761_+	TonB-dependent receptor	NA	NA	NA	NA
WP_000502860.1\|2514131_2514770_-	ParB N-terminal domain-containing protein	A0A0F7L444	uncultured_marine_virus	2.1e-54	51.0
WP_085959019.1\|2515196_2516409_+\|transposase	IS3-like element ISEc31 family transposase	Q716C2	Shigella_phage	7.5e-101	57.4
2523230:2523245	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2677587 : 2687033

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001359338.1\|2677587_2678724_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.9e-167	100.0
WP_013009241.1\|2678720_2680724_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	99.9
WP_001359339.1\|2680848_2681310_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	2.4e-76	99.3
WP_001295430.1\|2681351_2681822_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_000598641.1\|2681868_2682588_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001359340.1\|2682584_2684270_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	5.1e-305	99.8
WP_001240401.1\|2684491_2685223_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001216963.1\|2685282_2685390_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|2685370_2686102_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569336.1\|2686106_2687033_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	4.8e-23	30.8

DBSCAN-SWA_11

2932965 : 2938391

Enterobacteria_phage(50.0%)

integrase

attL 2923416:2923432|attR 2935380:2935396

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2923416:2923432	attL	NA	NA	NA	NA
WP_000368131.1\|2932965_2933898_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
WP_000958698.1\|2934209_2935367_+\|integrase	prophage integrase IntS	E7DYQ6	Enterobacteria_phage	1.4e-221	99.7
WP_000257010.1\|2935541_2936678_-	phage DNA ejection protein	Q716G3	Shigella_phage	1.4e-80	72.8
2935380:2935396	attR	NA	NA	NA	NA
WP_000960724.1\|2936687_2937368_-	DNA transfer protein	G5DA80	Enterobacteria_phage	1.8e-59	71.0
WP_000403518.1\|2937354_2937822_-	DUF2824 family protein	Q2A0B3	Sodalis_phage	1.8e-63	74.0
WP_000950857.1\|2937821_2938391_-	hypothetical protein	Q716G6	Shigella_phage	4.6e-69	99.3

DBSCAN-SWA_12

3124151 : 3200788

Salmonella_phage(46.81%)

tRNA,capsid,tail,holin,plate,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000940018.1\|3124151_3124889_-\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
WP_000553451.1\|3125007_3125811_+	inositol-1-monophosphatase	NA	NA	NA	NA
WP_001301747.1\|3125955_3126810_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000982994.1\|3127000_3128281_+	stationary phase inducible protein CsiE	NA	NA	NA	NA
WP_000244203.1\|3128272_3129412_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA
WP_000423257.1\|3129571_3130462_-	DNA-binding transcriptional regulator HcaR	NA	NA	NA	NA
WP_000211172.1\|3130597_3131959_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_001276062.1\|3131955_3132474_+	3-phenylpropionate/cinnamic acid dioxygenase subunit beta	NA	NA	NA	NA
WP_001080102.1\|3132473_3132794_+	bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit	NA	NA	NA	NA
WP_001281372.1\|3132790_3133603_+	3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase	NA	NA	NA	NA
WP_000660772.1\|3133612_3134815_+	phenylpropionate dioxygenase ferredoxin reductase subunit	NA	NA	NA	NA
WP_001087250.1\|3134911_3135334_+	DoxX family protein	NA	NA	NA	NA
WP_000158561.1\|3135381_3136254_-	aldose 1-epimerase	NA	NA	NA	NA
WP_000700787.1\|3136265_3137360_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_001276664.1\|3137392_3138391_-	ABC transporter permease	NA	NA	NA	NA
WP_000493510.1\|3138415_3139927_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-13	27.7
WP_001124894.1\|3139949_3140933_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_001358959.1\|3141029_3144311_-	DUF5107 domain-containing protein	NA	NA	NA	NA
WP_001200779.1\|3144428_3145622_+	ROK family protein	NA	NA	NA	NA
WP_000919153.1\|3145684_3146938_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.3e-100	52.7
WP_000883120.1\|3147265_3148456_+	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_000717694.1\|3148500_3148839_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
WP_001295369.1\|3148899_3150234_-	two-component system response regulator GlrR	W8CYM9	Bacillus_phage	3.9e-10	37.3
WP_001215861.1\|3150223_3150937_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA
WP_001301750.1\|3151101_3152529_-	two component system sensor histidine kinase QseE/GlrK	W8CYF6	Bacillus_phage	1.8e-16	25.6
WP_000970087.1\|3153104_3156992_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	5.9e-131	59.2
WP_000734212.1\|3157248_3158805_+	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA
WP_001298403.1\|3158801_3159338_-\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
WP_000190651.1\|3159362_3159998_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_001013779.1\|3160206_3161055_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_001288816.1\|3161693_3162341_+	hypothetical protein	NA	NA	NA	NA
WP_000904993.1\|3162413_3162962_-	site-specific DNA recombinase	A0A1S6L009	Salmonella_phage	2.8e-87	89.0
WP_077626228.1\|3162988_3163390_+\|tail	phage tail protein	F1BUP1	Erwinia_phage	5.9e-10	37.7
WP_000376430.1\|3163393_3163813_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	7.2e-35	53.7
WP_001030527.1\|3163784_3164387_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	4.3e-97	90.5
WP_001096936.1\|3164386_3165232_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	5.7e-47	56.0
WP_000049950.1\|3165231_3165912_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	2.6e-103	78.8
WP_001197088.1\|3165908_3167108_-\|plate	baseplate J/gp47 family protein	A0A0M4RD32	Salmonella_phage	1.4e-184	83.4
WP_001270630.1\|3167107_3167461_-	hypothetical protein	A0A0M4R339	Salmonella_phage	1.5e-54	89.7
WP_001007932.1\|3167460_3168213_-	hypothetical protein	A0A0M5M1K7	Salmonella_phage	2.0e-88	66.3
WP_000213604.1\|3168275_3168446_-	hypothetical protein	NA	NA	NA	NA
WP_000044735.1\|3168449_3169004_-	hypothetical protein	NA	NA	NA	NA
WP_000832850.1\|3169011_3169359_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	6.0e-27	81.1
WP_000081725.1\|3169361_3170426_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	3.2e-156	81.4
WP_000155119.1\|3170428_3170731_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	2.2e-49	92.0
WP_001298404.1\|3170730_3171318_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	3.4e-83	88.0
WP_000990892.1\|3171317_3173306_-	hypothetical protein	A0A0M4REK7	Salmonella_phage	2.5e-271	74.2
WP_000393952.1\|3173483_3173936_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	5.2e-55	71.3
WP_000109253.1\|3173939_3174380_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	9.2e-57	75.3
WP_000046937.1\|3174390_3175536_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.1e-161	73.8
WP_000503648.1\|3175539_3176103_-	hypothetical protein	A0A0M4R331	Salmonella_phage	1.7e-79	75.7
WP_001142480.1\|3176077_3176467_-	hypothetical protein	A0A0M3ULK0	Salmonella_phage	2.5e-66	96.1
WP_000008731.1\|3176453_3177008_-	hypothetical protein	A0A0M4S631	Salmonella_phage	8.0e-66	71.7
WP_000042171.1\|3177004_3177412_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	9.7e-69	94.8
WP_001040696.1\|3177377_3177746_-	hypothetical protein	A0A0M4RTX5	Salmonella_phage	8.8e-53	87.7
WP_000627481.1\|3177786_3178728_-	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	6.3e-156	87.2
WP_001066731.1\|3178739_3179246_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	1.7e-70	80.5
WP_000873179.1\|3179249_3180470_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.9e-200	87.8
WP_000184962.1\|3180484_3181219_-\|capsid	minor capsid protein	A0A0M4REK0	Salmonella_phage	2.3e-97	85.6
WP_000113493.1\|3181109_3182576_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	2.3e-261	91.6
WP_001130776.1\|3182575_3184198_-	hypothetical protein	A0A0M5M1R6	Salmonella_phage	0.0e+00	95.6
WP_000162796.1\|3184200_3184773_-\|terminase	terminase small subunit	A0A2H4J480	uncultured_Caudovirales_phage	1.4e-60	69.6
WP_000779566.1\|3184834_3185359_-	hypothetical protein	K7P6W1	Enterobacteria_phage	4.5e-42	66.9
WP_001157004.1\|3185342_3185819_-	glycoside hydrolase family 104 protein	Q8SBE0	Shigella_phage	5.0e-85	94.9
WP_000781777.1\|3185822_3186164_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	7.3e-54	92.8
WP_001174014.1\|3186609_3186951_-	hypothetical protein	NA	NA	NA	NA
WP_001244505.1\|3186982_3187405_-	antitermination protein	Q8W638	Enterobacteria_phage	5.2e-41	64.2
WP_001284072.1\|3187689_3189876_-	replication protein	B6SCY1	Bacteriophage	3.2e-174	72.4
WP_000170998.1\|3189879_3190092_-	helix-turn-helix transcriptional regulator	A0A0R6PHL1	Moraxella_phage	7.9e-06	42.9
WP_000049986.1\|3190212_3190836_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	3.3e-36	44.8
WP_000801676.1\|3191469_3191619_+	hypothetical protein	NA	NA	NA	NA
WP_000051352.1\|3191615_3192518_+	hypothetical protein	Q3LZP9	Bacteriophage	6.1e-07	54.4
WP_001113505.1\|3192520_3193822_+	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	3.0e-132	55.5
WP_000769005.1\|3193837_3194386_+	DUF2815 family protein	Q775A5	Bordetella_phage	2.1e-66	65.9
WP_000551014.1\|3194438_3195068_-	hypothetical protein	NA	NA	NA	NA
WP_000065474.1\|3195114_3197178_+	DNA polymerase	Q775A3	Bordetella_phage	5.7e-274	67.7
WP_130234667.1\|3197263_3197773_+	hypothetical protein	NA	NA	NA	NA
WP_001177149.1\|3197778_3198330_+	YfbU family protein	NA	NA	NA	NA
WP_000638863.1\|3198372_3198642_+	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	5.1e-26	63.5
WP_001101052.1\|3198647_3199358_-	hypothetical protein	NA	NA	NA	NA
WP_000627622.1\|3199396_3200788_+	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	2.2e-213	73.5

DBSCAN-SWA_13

3214947 : 3315071

115

Enterobacteria_phage(32.1%)

tRNA,integrase,transposase,head,protease,capsid,tail,holin,lysis,terminase

attL 3254274:3254289|attR 3314995:3315010

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001302911.1\|3214947_3215685_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219193.1\|3215816_3217151_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
WP_001383425.1\|3217183_3218065_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000189215.1\|3218167_3218755_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627807.1\|3218810_3219194_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	1.4e-32	72.0
WP_001262720.1\|3219498_3220188_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	3.5e-55	52.1
WP_000997403.1\|3220235_3221273_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098726.1\|3221479_3221899_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_000138184.1\|3221967_3222666_+\|tRNA	tRNA-uridine aminocarboxypropyltransferase	NA	NA	NA	NA
WP_000082974.1\|3222697_3225358_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000949265.1\|3225471_3226827_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_001322343.1\|3226872_3227196_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_000852126.1\|3227192_3228491_-	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	7.4e-46	32.2
WP_001235102.1\|3234254_3236828_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_000040152.1\|3236957_3237689_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079092.1\|3237685_3238666_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197686.1\|3238800_3239538_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178456.1\|3239808_3240150_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_001386991.1\|3240253_3240301_+	pheA operon leader peptide PheL	NA	NA	NA	NA
WP_000200089.1\|3240399_3241560_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000225204.1\|3241602_3242724_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168032.1\|3242734_3243805_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	6.9e-90	51.2
WP_001301878.1\|3244014_3244380_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001212391.1\|3244529_3245048_+	YfiR family protein	NA	NA	NA	NA
WP_000969027.1\|3245037_3246264_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_000589828.1\|3246279_3246762_+	OmpA family protein	NA	NA	NA	NA
WP_000065253.1\|3246838_3247186_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000264777.1\|3247227_3247995_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043335.1\|3248025_3248574_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256450.1\|3248592_3248841_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460035.1\|3248977_3250339_-	signal recognition particle protein	NA	NA	NA	NA
WP_001338897.1\|3250505_3251297_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_077626229.1\|3251318_3252605_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001296310.1\|3252659_3253253_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059167.1\|3253375_3254254_+	NAD(+) kinase	NA	NA	NA	NA
3254274:3254289	attL	NA	NA	NA	NA
WP_000880923.1\|3254339_3256001_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203437.1\|3256149_3256491_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001117838.1\|3256552_3256843_-	RnfH family protein	NA	NA	NA	NA
WP_000600190.1\|3256832_3257309_-	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_000162574.1\|3257440_3257923_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
WP_001217542.1\|3258768_3259017_+	DinI-like family protein	A5LH55	Enterobacteria_phage	3.1e-38	98.8
WP_001132161.1\|3259518_3260109_-	T3SS effector guanine nucleotide exchange factor EspM2	NA	NA	NA	NA
WP_001117988.1\|3261653_3262226_-	T3SS effector NleG family protein	H6WZN1	Escherichia_phage	2.1e-45	52.7
WP_001023480.1\|3262336_3262606_-\|tail	phage tail fiber C-terminal domain-containing protein	B6DZB8	Enterobacteria_phage	7.1e-44	98.9
WP_000279045.1\|3262607_3263921_-\|tail	phage tail protein	H6WZM9	Escherichia_phage	6.9e-76	97.5
WP_013009255.1\|3263985_3264609_-	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	1.1e-68	60.9
WP_000514730.1\|3264678_3268155_-	host specificity protein J	Q6H9T2	Enterobacteria_phage	0.0e+00	95.4
WP_134789912.1\|3268401_3269034_-\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	2.2e-96	88.5
WP_024201854.1\|3268979_3269717_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	5.5e-147	99.2
WP_001428824.1\|3269771_3270695_-	phage antirepressor Ant	A0A0N7KZK0	Stx2-converting_phage	1.3e-177	100.0
WP_001154347.1\|3270765_3270939_-	Arc family DNA-binding protein	A0A0P0ZC65	Stx2-converting_phage	1.7e-22	98.2
WP_001302649.1\|3271046_3271367_+	Arc family DNA-binding protein	A0A0P0ZBD1	Stx2-converting_phage	3.0e-49	100.0
WP_013009257.1\|3271383_3272082_-\|tail	phage minor tail protein L	Q9EYE3	Enterobacteria_phage	3.3e-133	99.6
WP_000807964.1\|3272081_3272423_-\|tail	phage tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
WP_000212977.1\|3272415_3275658_-\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	91.8
WP_001513217.1\|3275705_3275915_-	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	1.5e-33	100.0
WP_000710949.1\|3276010_3276385_-\|tail	phage tail assembly chaperone	A0A0P0ZE84	Stx2-converting_phage	1.7e-64	99.2
WP_001275485.1\|3276399_3277116_-	immunoglobulin domain-containing protein	A0A0P0ZDV1	Stx2-converting_phage	1.8e-126	99.2
WP_000133388.1\|3277182_3277527_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
WP_000573391.1\|3277523_3277970_-	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_001007889.1\|3277966_3278317_-\|head	phage head closure protein	A0A0P0ZDP7	Stx2-converting_phage	2.7e-59	100.0
WP_000125988.1\|3278327_3278654_-\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	7.0e-54	100.0
WP_001063099.1\|3281342_3281564_-	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
WP_000173078.1\|3281608_3283546_-\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	99.5
WP_001368653.1\|3283609_3285271_-\|terminase	terminase large subunit	A0A0P0ZEI4	Stx2-converting_phage	0.0e+00	99.3
WP_000958380.1\|3285267_3285831_-\|terminase	terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	1.1e-89	100.0
WP_013009260.1\|3286121_3286487_-	HNH endonuclease	A0A0P0ZCH0	Stx2-converting_phage	4.2e-63	95.0
WP_000095747.1\|3286528_3286729_+	YlcI/YnfO family protein	H6WZK6	Escherichia_phage	8.1e-29	95.5
WP_000828065.1\|3286861_3287188_-	TonB family protein	H6WZK5	Escherichia_phage	4.7e-50	88.9
WP_013009262.1\|3287534_3287759_-	hypothetical protein	NA	NA	NA	NA
WP_001082579.1\|3287755_3288250_-\|lysis	lysis protein	Q6H9V3	Enterobacteria_phage	4.6e-73	94.2
WP_000539792.1\|3288257_3288404_-	hypothetical protein	A0A0P0ZE99	Stx2-converting_phage	2.6e-16	100.0
WP_001056806.1\|3288403_3288973_-	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
WP_000992088.1\|3289243_3289777_-	lysozyme	B6DZ92	Enterobacteria_phage	5.6e-101	98.3
WP_000731241.1\|3289827_3290172_-	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	1.7e-58	99.1
WP_029785460.1\|3290176_3290392_-\|holin	class II holin family protein	Q6H9V8	Enterobacteria_phage	1.7e-32	97.2
WP_143714089.1\|3290757_3291970_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.7e-100	57.4
WP_000143024.1\|3292087_3293938_-	SASA family carbohydrate esterase	H6WZJ9	Escherichia_phage	0.0e+00	98.7
WP_000466957.1\|3294509_3294941_-	tellurite resistance TerB family protein	H6WZJ6	Escherichia_phage	3.3e-67	97.2
WP_001356551.1\|3295402_3295555_-	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
WP_001204862.1\|3295803_3296238_-	antitermination protein	Q777W5	Enterobacteria_phage	1.8e-81	99.3
WP_000144764.1\|3296230_3296425_-	phage NinH family protein	G9L694	Escherichia_phage	1.9e-30	100.0
WP_001108006.1\|3296421_3297027_-	recombination protein NinG	Q8VNP2	Enterobacteria_phage	1.9e-97	100.0
WP_001004030.1\|3297026_3297749_-	phage antirepressor KilAC domain-containing protein	Q4A1A3	Enterobacteria_phage	5.4e-131	99.6
WP_000211412.1\|3297823_3298528_-	phage antirepressor Ant	Q8VNP5	Enterobacteria_phage	6.5e-129	96.6
WP_001254208.1\|3298805_3298988_-	NinE family protein	Q4A1A6	Enterobacteria_phage	3.1e-27	96.7
WP_000153282.1\|3298984_3299512_-	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	2.8e-100	99.4
WP_000736897.1\|3299508_3299949_-	recombination protein NinB	Q8H9Z8	Enterobacteria_phage	7.0e-81	99.3
WP_000145931.1\|3300022_3300313_-	protein ren	A0A1I9LJP5	Stx_converting_phage	9.6e-47	100.0
WP_000788877.1\|3300309_3301011_-	Replication protein 14	K7P6G2	Enterobacteria_phage	9.9e-130	100.0
WP_000185457.1\|3301007_3301946_-	replication protein	C1JJ53	Enterobacteria_phage	3.7e-172	99.4
WP_000035947.1\|3301978_3302275_-	hypothetical protein	A0A0N7C1W0	Escherichia_phage	1.3e-46	96.9
WP_000276885.1\|3302384_3302570_-	Cro/Cl family transcriptional regulator	K7PHK4	Enterobacteria_phage	1.2e-26	100.0
WP_001095982.1\|3302650_3303301_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	4.9e-123	100.0
WP_000256573.1\|3303615_3303921_+	hypothetical protein	K7PJM7	Enterobacteria_phage	7.0e-48	99.0
WP_000930321.1\|3303923_3304262_+	hypothetical protein	K7PJW2	Enterobacteria_phage	5.8e-59	99.1
WP_000167595.1\|3304395_3304866_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.7e-88	100.0
WP_000065350.1\|3305015_3305384_+	DUF2528 family protein	M1FPD2	Enterobacteria_phage	1.0e-64	98.4
WP_001198860.1\|3305456_3305621_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	A0A0N6WES3	Escherichia_phage	1.4e-26	100.0
WP_000372926.1\|3305589_3305754_+	host cell division inhibitory peptide Kil	A0A0P0ZC96	Stx2-converting_phage	3.2e-23	98.1
WP_000995439.1\|3305808_3306105_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_000100845.1\|3306110_3306896_+	phage recombination protein Bet	A0A0N7KZJ3	Stx2-converting_phage	1.1e-148	100.0
WP_000186825.1\|3306892_3307573_+	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	1.3e-131	99.1
WP_000682317.1\|3307569_3307752_+	DUF1317 domain-containing protein	A0A0P0ZAS9	Stx2-converting_phage	2.8e-28	98.3
WP_000548523.1\|3307724_3307916_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	1.8e-25	95.2
WP_000188857.1\|3307992_3308208_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	3.8e-32	98.6
WP_000774248.1\|3308306_3308528_+	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	3.8e-35	100.0
WP_001290004.1\|3308524_3309343_+	ead/Ea22-like family protein	A0A1I9LJM5	Stx_converting_phage	6.7e-61	57.9
WP_000628782.1\|3309339_3309843_+	DUF551 domain-containing protein	A0A088CE95	Shigella_phage	1.4e-56	43.3
WP_000457735.1\|3309930_3310173_+	DUF4222 domain-containing protein	H6WZF9	Escherichia_phage	1.2e-37	100.0
WP_001030149.1\|3310176_3310323_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	5.9e-21	87.5
WP_013009269.1\|3310495_3311680_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	5.3e-200	87.6
WP_000101041.1\|3312172_3313096_+	DUF4760 domain-containing protein	A0A1B5FPC5	Escherichia_phage	6.9e-155	87.4
WP_001358980.1\|3313386_3314616_+\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	4.9e-233	99.3
WP_000448924.1\|3314654_3315071_+	hypothetical protein	A0A1B5FPM5	Escherichia_phage	1.1e-70	98.6
3314995:3315010	attR	NA	NA	NA	NA

DBSCAN-SWA_14

3716164 : 3723565

Shigella_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085959019.1\|3716164_3717377_+\|transposase	IS3-like element ISEc31 family transposase	Q716C2	Shigella_phage	7.5e-101	57.4
WP_001323397.1\|3717498_3717657_+	DUF905 family protein	NA	NA	NA	NA
WP_001234731.1\|3717811_3718630_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	2.3e-45	39.3
WP_000213700.1\|3718720_3719206_+	antirestriction protein	A9J566	Pseudomonas_phage	2.4e-13	31.7
WP_001186192.1\|3719220_3719697_+	RadC family protein	NA	NA	NA	NA
WP_000692323.1\|3719759_3719981_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.4e-10	45.8
WP_001285587.1\|3720054_3720423_+	type IV toxin-antitoxin system toxin CbtA	NA	NA	NA	NA
WP_013009286.1\|3721262_3722804_+\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	8.3e-129	46.4
WP_001016257.1\|3722818_3723565_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6

DBSCAN-SWA_15

5306262 : 5358235

Enterobacteria_phage(45.28%)

integrase,head,portal,capsid,tail,holin,terminase

attL 5303176:5303201|attR 5360309:5360334

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5303176:5303201	attL	NA	NA	NA	NA
WP_001218277.1\|5306262_5307486_+\|integrase	site-specific integrase	A5LH57	Enterobacteria_phage	4.0e-235	98.5
WP_001159679.1\|5307668_5311496_+	SIR2 family protein	NA	NA	NA	NA
WP_000206744.1\|5311892_5312513_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	6.3e-112	90.8
WP_001242714.1\|5312512_5312875_-	phage protein	K7PH61	Enterobacteria_phage	1.7e-64	97.4
WP_000008230.1\|5312865_5313402_-	5'-deoxynucleotidase	S5MW55	Escherichia_phage	1.6e-100	99.4
WP_000081297.1\|5313529_5314354_-	YfdQ family protein	Q8SBF9	Shigella_phage	4.6e-150	99.6
WP_000135680.1\|5314419_5314782_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_001311077.1\|5315484_5316177_-	helix-turn-helix domain-containing protein	S5FUZ3	Shigella_phage	2.9e-121	96.5
WP_001191669.1\|5316274_5316535_+	helix-turn-helix transcriptional regulator	K7PJQ8	Enterobacteria_phage	5.4e-41	100.0
WP_000526667.1\|5316527_5317079_+	hypothetical protein	S5FXP0	Shigella_phage	2.1e-95	95.1
WP_001250269.1\|5317254_5317434_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_000104941.1\|5317423_5318365_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	6.4e-140	93.0
WP_013009328.1\|5318361_5318856_+	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	1.1e-85	97.5
WP_000066917.1\|5318855_5319509_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_000210181.1\|5319505_5319832_+	LexA family transcriptional regulator	U5P451	Shigella_phage	9.2e-54	100.0
WP_000771483.1\|5319828_5320224_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	9.7e-66	97.6
WP_001072669.1\|5320386_5321202_+	KilA-N domain-containing protein	U5P4K5	Shigella_phage	8.5e-149	99.3
WP_001519432.1\|5321209_5322199_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.3e-195	99.7
WP_001047103.1\|5322212_5322965_+	antitermination protein	Q8SBE4	Shigella_phage	3.4e-136	98.4
WP_122632654.1\|5323243_5323333_-	hypothetical protein	NA	NA	NA	NA
WP_000087755.1\|5323387_5323600_-	cold shock-like protein CspF	NA	NA	NA	NA
WP_000066486.1\|5323900_5324116_+	cold shock-like protein CspB	A0A1W6JNX5	Morganella_phage	5.9e-25	75.0
WP_000839580.1\|5324868_5325084_+\|holin	class II holin family protein	A5LH82	Enterobacteria_phage	1.9e-31	93.0
WP_000193257.1\|5325088_5325433_+	YdfR family protein	K7PGU6	Enterobacteria_phage	7.0e-36	91.7
WP_001315200.1\|5325398_5325671_-	hypothetical protein	NA	NA	NA	NA
WP_000992048.1\|5325776_5326310_+	lysozyme	K7PLY1	Enterobacteria_phage	1.5e-98	94.9
WP_001071779.1\|5326306_5326798_+	DUF2514 domain-containing protein	NA	NA	NA	NA
WP_000066496.1\|5327166_5327379_+	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_071528545.1\|5327389_5327578_+	cold-shock protein	NA	NA	NA	NA
WP_001443523.1\|5327725_5327881_+	hypothetical protein	NA	NA	NA	NA
WP_001019207.1\|5328053_5328227_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_000548594.1\|5328522_5328729_+	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	2.6e-22	80.9
WP_032143631.1\|5328982_5329174_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	8.0e-26	96.8
WP_000867568.1\|5329562_5330111_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
WP_001304453.1\|5330082_5332011_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	3.3e-260	66.7
WP_000258997.1\|5331994_5332201_+\|head	phage head-stabilizing protein	K7PM10	Enterobacteria_phage	3.0e-10	55.4
WP_000831760.1\|5332197_5333790_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	6.5e-185	61.1
WP_001253894.1\|5333779_5335285_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	1.3e-99	53.2
WP_000256813.1\|5335321_5335669_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.6e-22	58.1
WP_000522651.1\|5335726_5336755_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	2.7e-115	61.6
WP_000201530.1\|5336806_5337181_+	hypothetical protein	NA	NA	NA	NA
WP_001204540.1\|5337173_5337527_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	3.4e-38	65.0
WP_001007375.1\|5337538_5338117_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.7e-79	92.2
WP_000683149.1\|5338113_5338509_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	5.0e-70	98.5
WP_001577918.1\|5338516_5339257_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.1e-130	98.0
WP_000479163.1\|5339272_5339695_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-70	95.7
WP_000459487.1\|5339676_5340111_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.5e-63	97.5
WP_000840309.1\|5340103_5342665_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	90.2
WP_000847318.1\|5342661_5342991_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	1.9e-54	95.4
WP_001179670.1\|5342990_5343689_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	4.9e-129	95.7
WP_064717060.1\|5343693_5344437_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-145	96.0
WP_013009330.1\|5344334_5344976_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	8.6e-96	85.1
WP_153274582.1\|5345048_5345387_+	hypothetical protein	NA	NA	NA	NA
WP_000515647.1\|5345453_5348852_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	89.3
WP_001230356.1\|5348918_5349518_+	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	1.8e-111	99.0
WP_013009332.1\|5349582_5352411_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0K2FIZ6	Escherichia_phage	2.5e-54	92.4
WP_000885582.1\|5352410_5352986_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	7.2e-102	94.8
WP_000086527.1\|5353083_5353674_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_000836769.1\|5354052_5354286_-	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	6.4e-33	88.3
WP_001372053.1\|5354354_5354468_-	hypothetical protein	A0A1C9IHU6	Salmonella_phage	1.4e-06	77.8
WP_001217537.1\|5354894_5355143_-	DinI-like family protein	A5LH55	Enterobacteria_phage	2.4e-38	98.8
WP_000202563.1\|5355362_5356949_+	peptide chain release factor 3	D0R0F5	Streptococcus_phage	2.4e-30	25.2
WP_001295748.1\|5357341_5357947_+	molecular chaperone OsmY	NA	NA	NA	NA
WP_000490275.1\|5358073_5358235_+	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	1.8e-10	64.2
5360309:5360334	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_013941

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection