CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	2 crisprs	csm6,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx16,cas2,cas1,DEDDh,cas6	1	27	0
NC_013862	Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequence	0 crisprs	NA	0	0	0
NC_013851	Allochromatium vinosum DSM 180, complete sequence	5 crisprs	DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas3,RT,PD-DExK,DinG,c2c9_V-U4,cas6,csa3,Cas9_archaeal	0	49	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_013852_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013852_1

8015-8670

TypeIII

Consensus_repeat	Method
GTTCGGCACTGAGACCCGAATT-GAGGGGATTAAGAC	PILER-CR
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CRISPRCasFinder
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CRT

9 spacers

cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csm6,csx1,csx16,cas2

The CRISPR arrays of NC_013852_1

>merge|NC_013852|1|8015-8670|PILER-CR,CRISPRCasFinder,CRT
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGACTTTGAGTTCGATGCTGCTTAAACTGATCGAAAAGTTCGGCACTGAGACCCGAATTGAGGGGATTAAGACTCCATTATAAATATCAGCTCCACAAATAGGGCAGTTCGGCACTGAGACCCGAATTGAGGGGATTAAGACCCTCCTCGGAGGCATCCATAGCCTCTTTTGCAGAGTTCGGCACTGAGACCCGAATTGAGGGGATTAAGACGGAAACAACGATGTCTTCCAGGTCATTGCCGTTGTTCGGCACTGAGACCCGAATTGAGGGGATTAAGACATATGGTGTGCTCCTTCGCCCAAGATCTTGAGGGTTCGGCACTGAGACCCGAATTGAGGGGATTAAGACATGAGCGCGAGTGAACATATCCATCACACCCCGTTCGGCACTGAGACCCGAATTGAGGGGATTAAGACCGTGTCCTCTGCCCATTTCTTGAACTCCCGGGTTCGGCACTGAGACCCGAATTGAGGGGATTAAGACCCTTGTTACATCCCGTCCAAGCGTCTTCGTAAAAGTTCGGCACTGAGACCCGAATTGAGGGGATTAAGACCGGGATTGAGCGCTTAATAACGGCCATGACTGGGTTCGGCACTGAGACCCGAATTGAGGGGATTAAACC

>NC_013852|1|1|8015-8601|PILER-CR
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	TTTGAGTTCGATGCTGCTTAAACTGATCGAAAA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	TCCATTATAAATATCAGCTCCACAAATAGGGCA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CCTCCTCGGAGGCATCCATAGCCTCTTTTGCAGA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	GGAAACAACGATGTCTTCCAGGTCATTGCCGTT
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	ATATGGTGTGCTCCTTCGCCCAAGATCTTGAGG
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	ATGAGCGCGAGTGAACATATCCATCACACCCC
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CGTGTCCTCTGCCCATTTCTTGAACTCCCGG
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CCTTGTTACATCCCGTCCAAGCGTCTTCGTAAAA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC

>NC_013852|1|1|8015-8670|CRISPRCasFinder
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	TTTGAGTTCGATGCTGCTTAAACTGATCGAAAA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	TCCATTATAAATATCAGCTCCACAAATAGGGCA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CCTCCTCGGAGGCATCCATAGCCTCTTTTGCAGA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	GGAAACAACGATGTCTTCCAGGTCATTGCCGTT
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	ATATGGTGTGCTCCTTCGCCCAAGATCTTGAGG
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	ATGAGCGCGAGTGAACATATCCATCACACCCC
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CGTGTCCTCTGCCCATTTCTTGAACTCCCGG
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CCTTGTTACATCCCGTCCAAGCGTCTTCGTAAAA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CGGGATTGAGCGCTTAATAACGGCCATGACTGG
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAACC

>NC_013852|1|1|8015-8670|CRT
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	TTTGAGTTCGATGCTGCTTAAACTGATCGAAAA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	TCCATTATAAATATCAGCTCCACAAATAGGGCA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CCTCCTCGGAGGCATCCATAGCCTCTTTTGCAGA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	GGAAACAACGATGTCTTCCAGGTCATTGCCGTT
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	ATATGGTGTGCTCCTTCGCCCAAGATCTTGAGG
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	ATGAGCGCGAGTGAACATATCCATCACACCCC
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CGTGTCCTCTGCCCATTTCTTGAACTCCCGG
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CCTTGTTACATCCCGTCCAAGCGTCTTCGTAAAA
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAGAC	CGGGATTGAGCGCTTAATAACGGCCATGACTGG
GTTCGGCACTGAGACCCGAATTGAGGGGATTAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NC_013852.1\|WP_012972299.1\|12188_12761_+\|hypothetical-protein	unknown	unknown	unknown
NC_013852.1\|WP_012972296.1\|6820_7855_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NC_013852.1\|WP_012972302.1\|14594_15722_+\|TIGR02584-family-CRISPR-associated-protein	csx1	pfam09623_csx1_CAS-III	gnl\|CDD\|187872
NC_013852.1\|WP_012972298.1\|11987_12173_+\|hypothetical-protein	unknown	unknown	unknown
NC_013852.1\|WP_012972295.1\|6413_6818_+\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	cd09749_cmr5gr11_CAS-III-B	gnl\|CDD\|378242
NC_013852.1\|WP_012972290.1\|22_1168_+\|putative-CRISPR-associated-protein	csm6	cd09742_csm6_CAS-III-A:CAS-III-D	gnl\|CDD\|187873
NC_013852.1\|WP_012972307.1\|17550_17922_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NC_013852.1\|WP_012972291.1\|1202_2384_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|224286
NC_013852.1\|WP_012972304.1\|16229_16547_+\|CRISPR-associated-protein-Csx16	csx16	cd09743_csx16_CAS-I:CAS-III	gnl\|CDD\|370601
NC_013852.1\|WP_012972306.1\|17239_17524_+\|CRISPR-associated-endonuclease-Cas2	unknown	unknown	gnl\|CDD\|187856
NC_013852.1\|WP_012972294.1\|5538_6417_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
NC_013852.1\|WP_012972292.1\|2387_4205_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NC_013852.1\|WP_012972300.1\|12750_13776_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|188593
NC_013852.1\|WP_012972301.1\|13916_14549_+\|EcsC-family-protein	unknown	unknown	gnl\|CDD\|378945
NC_013852.1\|WP_012972297.1\|10196_11942_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|274251
NC_013852.1\|WP_012972305.1\|16626_17145_+\|PEGA-domain-containing-protein	unknown	unknown	gnl\|CDD\|378276
NC_013852.1\|WP_012972293.1\|4201_5500_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|370625

Protein	Function_ID	Function_description	E-value
NC_013852.1\|WP_012972290.1\|22_1168_+\|putative-CRISPR-associated-protein	gnl\|CDD\|187873	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; loosely associated with CRISPR/Cas systems; also known as APE2256 family.	6.27845e-29
NC_013852.1\|WP_012972302.1\|14594_15722_+\|TIGR02584-family-CRISPR-associated-protein	gnl\|CDD\|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	1.0737e-81
NC_013852.1\|WP_012972301.1\|13916_14549_+\|EcsC-family-protein	gnl\|CDD\|378945	pfam12787, EcsC, EcsC protein family. Proteins in this family are related to EcsC from B. subtilis. This protein is found in an operon with EcsA and EcsB which are components of an ABC transport system. The function of this protein is unknown.	4.49081e-07
NC_013852.1\|WP_012972296.1\|6820_7855_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	9.74959e-33
NC_013852.1\|WP_012972307.1\|17550_17922_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	6.43628e-17
NC_013852.1\|WP_012972291.1\|1202_2384_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|224286	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.73647e-30
NC_013852.1\|WP_012972306.1\|17239_17524_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.15179e-08
NC_013852.1\|WP_012972294.1\|5538_6417_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	3.39472e-63
NC_013852.1\|WP_012972292.1\|2387_4205_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	1.14106e-63
NC_013852.1\|WP_012972300.1\|12750_13776_+\|radical-SAM-protein	gnl\|CDD\|188593	TIGR04078, radical_SAM_domain_protein_protein, peptide modification radical SAM enzyme, YydG family. Members of this radical SAM protein family for peptide modification occur only in the context of members of family TIGR04077, which average about 50 amino acids in length. In Bacillus subtilis, this protein (YydG) appears to act on its cognate target peptide (YydF) prior to its export, and result in the creation of a signaling molecule that induces the LiaRS two-component system. [Regulatory functions, Protein interactions].	4.59974e-23
NC_013852.1\|WP_012972304.1\|16229_16547_+\|CRISPR-associated-protein-Csx16	gnl\|CDD\|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	1.96471e-50
NC_013852.1\|WP_012972295.1\|6413_6818_+\|type-III-B-CRISPR-module-associated-protein-Cmr5	gnl\|CDD\|378242	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family, represented by TM1791.1 of Thermotoga maritima, is found in both archaeal and bacterial species.	6.5735e-34
NC_013852.1\|WP_012972297.1\|10196_11942_+\|radical-SAM-protein	gnl\|CDD\|274251	TIGR02668, moaA_archaeal, probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666). [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	8.42978e-23
NC_013852.1\|WP_012972305.1\|16626_17145_+\|PEGA-domain-containing-protein	gnl\|CDD\|378276	pfam09851, SHOCT, Short C-terminal domain.	6.46879e-06
NC_013852.1\|WP_012972293.1\|4201_5500_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|370625	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3). CRISPR is a term for Clustered Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family, found in at least ten different archaeal and bacterial species, is represented by TM1793 from Thermotoga maritima.	4.99033e-72

>NC_013852.1|WP_012972296.1|6820_7855_+|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MATQLMREALRPLYHSAREAHPGLLIQRGYPVYDQETEEGREAKTRHLQRICAVTPTPFYHNAYQRWRTATADPLRFRQIQLALESRLFIGLTGGGMLETGCAISHSYGMPYIPGSSVKGVVRAHVCGSPFADKHPEVIAELFGAEADPMPEAPYPQGLSGLVSFHDAWWVPGSAERPLVEEIVTTHHLEYYGSEGRTPATDFDSPIPNAQIAVQGHCLFVLEGPPAWLDLAQQMLIAALSKRGIGAKTRTGYGLFDFNPQKPAGPVCAWVNETIERLAQQNKTNSEEVLRSKGLAAEWAALTDAALKAEALEDIRSRWQEKERDWWDNPPGKSAKQARALYDE
>NC_013852.1|WP_012972295.1|6413_6818_+|type-III-B-CRISPR-module-associated-protein-Cmr5
MKMRAHQVATAAYACVEARKDEPNKKKYGAIAHKLPGMILQNGLAQATGFLLAKGAGAPEHLMLLDDLKEVLRAGGTLTVTSGEALHREIIGADLAKTLKLTRAALEASGWIKRYVQGVLRVTATGDTSNGEEN
>NC_013852.1|WP_012972294.1|5538_6417_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MHSRLFHLHTLSALHCGTGQSVGVVDLPIARARATQLPIVPGSSLRGVLRQEIGARDADLERALFGPRTVKDNAGSFAGALAVGDAHLLAMPVRALAGILCYVTAPFILRRYARDLADVGLKTPEIPSPANREHALVPTDSVNLLDTTLVLEDLDLGAQRNARTQEWAMTIAALIHPNDATGQRDFIERFAILPDDILGYLSETATELRTRISIDQDTGTVKKGALWFEEHLPAESVLWGLYALSDSNEPNQKRTAHELAQALPSGSALLQLGGQAGVGRGLVRLLTQEVAA
>NC_013852.1|WP_012972293.1|4201_5500_+|type-III-B-CRISPR-module-associated-protein-Cmr3
MSKKGKKQPKINYNKQQRLQGQSSAAQATPAAQSARVQREAPKSAAPSPIVSLEPLAPLIVRSGRPFDDQAGADAPRFPPPSTLAGCLRTAWARANDQAFGPKLAELAVASPFLARVDNTGNIVRRLAPKPADAQYFGHDKEARCLRLEPSRFEDGCNADLPDGLRPLRLSETIQGKASKGPAWWDWEDLIAFRQGKTLDHKELTKRGWSPPSGDRRTHVAIDAVTQAAESGRLFQTEGLDLEPDNPTLNQTLKQKQTPDHSASGTLRLLARFAEPLPGGLVHLGGERRLARLHPEPETAWPTPPATWFQDIHTAGGLTLTLLTPGVFQAGYRPGWLDATLTGEPPIAPGVRLRLVAAAVERWQPHSGWDLLKKEPRPTRKLVGAGATYWFRLLEPTTPEALAPLWLASLCDLEQDRRDGFGLALPAPWKID
>NC_013852.1|WP_012972292.1|2387_4205_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MPQYLVTLSLGPVQSLIEAARRTRDLWCGSWLLSESARAAARVLHQAEPGCLIFPCPEKPDEELEPQTEPRDSANIANILRAKVELPNADAARALCERAKQAAAQRLIDLGEQARGRLKVKLRDEVWQAQIGDLLEGFAAWVEIPAGDDAYTQAGAKLGATLAARKATRDFSPAAPLKTPGLPKSSLDGALETVLPEYWHEEHRARRQLGLSRGEQLDALGVMKRMAGQVEQFTPYSRVAADPWIRTLEPEQQQALSAAYEPIVKSRLATRVSGNCGAYEALPYDAQMLYDFRLDNALAAKGEDAAEPEEREALLKLQKVMKSLPAEKGAPVPYAAILKADGDRMGALLQRARQAADSREISKALHGFASDVRKLVRQHHGHAIYSGGDDVLALVPLPEALACARTLAEAFAKALQPVAKSLGLNAAEHPTLSVGLAIGHLMEPLGALRKRAGHAEHLAKGDGLPPDKTRNALAIVLGIRSGGELEWRANWDDSEALAELEVFTVAYRDGQLSSRVAYDLRAIDRRLAWMRDDGSAAAKGMREAEVARMLDRAQARGGTEALETAQRRAILTAARRQSLATLADTLILARWLSARTVADLGVRDQ
>NC_013852.1|WP_012972291.1|1202_2384_+|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MRRSTLELDPSVALSAWSETTAANADPWTHYVCKLVTPLYGGGVRAAEVDTGMPIRAASIRGQLRFWWRIVAGPFASPEAMFQREAAIWGGIAASGPSASRVAARVKAKPVQAMHLSAKSQFAGLPAYGLILDPGADPILLKSGYSFELSVRCASDLTSQQYDEVQTALRWWASFGGVGARTRRGFGAVQVGMLKPVTPEEVAQCGGRLCVAPSGSNEIDAWETSVKKLQRFRQGPNLGRNPGQGNRPGRSRWPEPDTIRRQTRRHAKNHDPEHPVDGAYPRAWFGLPIIFHFKDAGEPNDSTLIPDGERDRMASPLILRPYWSGQKWHPSALLLPGWERRTTELRVGFGNGPFRRAWPADPAERARLAEQIKPMAGRGDDPLTAFMDYFEQD
>NC_013852.1|WP_012972290.1|22_1168_+|putative-CRISPR-associated-protein
MPVYLCTCGTSAAKKFFGQTPRFDAAWVTEHGGVEAASKVIYDTFRTARLDDEVALKRDLSAEIHSLARMGVNDKDTVVLFSSETADGQACAWAVKRYLEQARPGILCRIEVVAGLQVTDAHVFRTAGVLNFTKAVLHEIDANGTGQCVLNPTGGFKSLVPYTVLIGMLRGVPAKYIFEQSSALIPLPMMPVEFARSRLEPLRPLLERIQNETAIPRAELDKALPSFEEREILDSLFEDVGQGQVSLSPVGFLIWEELERPTALVPFLSRRALDDLLKMRATEGTAPDDYITRVARSPEQLAIGKHESWSKGLFWLKRGEHTRDRYLVSVEGWRLLVWRIVDHDEYDDLLTQNRKTDAGARVVAERREKYAPFVRLELYED
>NC_013852.1|WP_012972297.1|10196_11942_+|radical-SAM-protein
MNWRMERQADDLRVWIQRTPDQDLLPELVKLELSLGSSPIHSMTLAFDPGVEIPRERLERLDYRPSAPREYIKSLPHRRSVRFSITEKCNYRCFFCHEEGLDMDRERQKTEEAALFKVFDQLKALDYDDLTFTGGEPLLKWRQILRALEYMQAIGYRPDVKFVSNGRVLNDTFIEGLKRYPGRVRFNISMHSLDSACYDRIVHPLSSHTPGTRDDLAHVQHNLARLNAAEIPFKLNFVLLNGLNTSAEQIDRIFAYALACGARRVKFLELLITRTLKDLYPYYYRLQALRDQLGDQLTPLESGLRRTVYRYRDTPLLVELQSCTCSRGCNVCSLNRDVNFTAEQRYFPCFLHPEDGVDLRVSSLSEAIDSGAAYIADMAHRFGDHSPIIIRDHYLTRQETAYYYAIARDDIPRFVAHIEHAYGLELQRHRRLRETYFSDGSDAFERFEYVRKLAINTYDHQATEITQQHRVDPAGSGCIETAFGEDSPAIADIADYQRELAQQGFHRVLQVAWELDYYGSGGQPTGDLSLSLGQVLGGEMALVRSCRPLQDAPCPLRPLTQPVPAWLMTHHKLVVPTEPAD
>NC_013852.1|WP_012972298.1|11987_12173_+|hypothetical-protein
MSIQPQHRLTTALRAPQHGSPLWAHVGARTTAPALCAVLTAGTTPRRPELACSTSIVTIVY
>NC_013852.1|WP_012972299.1|12188_12761_+|hypothetical-protein
MRTLALCVGPGRLHLIPATQADLIVAGAEAEPPQRHETPERLTLTAPTQTRFGFSVPPAVDWTLHVPPDFDRLLVQSAGTTVISEGLAWIDVRLEGATSRFECRARHLGTLSLVGTGQQADVQVGRLERLSLDGLNNRATLVHAEAFALERHGHGLGCQVTAPSAQPGTAHRLNCRLNGLRQVVEIRHAA
>NC_013852.1|WP_012972300.1|12750_13776_+|radical-SAM-protein
MRPDSGNALVFKPTRACPARCDFCCDPSEASRERLRRTEMLALLERLTATVPGLIGTVGFTGGEPFLLFDDVQAVLERAAESGLGGAVVSSSHWATSRAEAHQRLSTLAQAGLQRYSTSCDPEHLRFVPLERIRHAVSAALELGLAVTVTGTFADPGASVAALLGEDLAAQVVCEDKLIAPFGRAVGQAATARRYGLPTDPAAWGCYRRLGHDILVQPNGDVLPCCATNNTINPLVFGNLRAGDDPTEIVQAITRSFLLRVLKFESFATLRALVTAHAPDLEWPDPAHASGPCGYCAEVFGDVERATVILEALAQAQPAYRQQLARQAGLSEATLSALAGL
>NC_013852.1|WP_012972301.1|13916_14549_+|EcsC-family-protein
MAQTLNQDTLMQALDWAYDKAVNGVAGLDSASDLAHDYMQRNGSRHDQAQSLIRWQSAKAATSGFLTGLGGLVTMPVTLPANITSVVYIQVRMVAAVAAMGEYDIHDDRVKVLVYACLAGNTAKDIIKSAGIVAGRKLTEQAIRGISAKTITAINQKVGFRLLTKFGQKGVINLGKLVPVAGGVIGGSLDAVATRTIGHIARETFIVAAD
>NC_013852.1|WP_012972302.1|14594_15722_+|TIGR02584-family-CRISPR-associated-protein
MMSQHTTPRRILLAVTGLTPQIVTETLYALACRDEDPWIPDEVHLITTATGADNARLNLLAGERWFHRLCEDYGLPPIVFTPEQIHVLQDAEGRPLDDIRTQADNTLAADFITETLRALTADPNSELHVSIAGGRKTMGYYLGYALSLYGRPQDRLSHVLVSDPYETNRDFYYPTPYEHPIHSRRGDKEVTVDARHAHVDLADIPFVRLRDGLPERLRTGQAGFTMAVATANRGLQEPRLVLDVAQQRVWADDEEIVLSKTRFAILLWLAERARRGESTTDWSQPEVAREFLSDVATRIFNPNGGEYQRLEESLGWRIAKSCEPNEYFQPHKANINKALTHTLGKRSAERYLIGIGRGKDNSFPLVAEQIEILGD
>NC_013852.1|WP_012972304.1|16229_16547_+|CRISPR-associated-protein-Csx16
MATYFVSRHPGAHDWAAEEGFEVEAVIVHLDPALIQPGDSVIGSLPVNLAAEVCARGARYLNLSLDLPPELRGRELSTEQMRACGARIEEYRVMRVVPGHEPASL
>NC_013852.1|WP_012972305.1|16626_17145_+|PEGA-domain-containing-protein
MRHLPVSFLLGSTLLLTSGCATVTRGTTDTLVIESDPPGAQVTLSNGMSGQTPASFKLSRKTAVVIDIAKAGYEPVKVNVQPQISGAGGAGMAGNVLVGGLIGVAVDAGTGAMNDLKPNPIQVRLAPLAGGAASQSATAIDARLQRLAAMRRSGALTETEYRRKRAEILDGL
>NC_013852.1|WP_012972306.1|17239_17524_+|CRISPR-associated-endonuclease-Cas2
MSSRLAVFAYDIRDDRVRRHALKTLREWRLDGQLSVHECQVDAIQARRLFEQLGDELDPATDAWLFTWVEGHRAVLARGKGRTTALQDGLLLAA
>NC_013852.1|WP_012972307.1|17550_17922_+|CRISPR-associated-endonuclease-Cas2
MSQSGWYLLAYDIADPRRLQRLHRAVRREGIALQRSVFLVQGTESDIEALLDRLETLMDVAKDDLRAYPVAAPSALWLQGQCVVQGHLLGDGEAATESRPSAPGWRALTTPTPPVLPFTRSQS

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Crispr_ID: NC_013852_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013852_2

19223-19945

TypeIII

Consensus_repeat	Method
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	CRISPRCasFinder
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	CRT
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGA	PILER-CR

10 spacers

cas1,cas2,csx16,csx1

The CRISPR arrays of NC_013852_2

>merge|NC_013852|2|19223-19945|CRISPRCasFinder,CRT,PILER-CR
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGACGCCTCGGTGCCCGCTGTTGAAATAGCGATGGTGTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGACGCCGTGTTCAGGTCCGACACGCCAGCGGTGGCCGTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGACGGTCTGCGGGGCCTGGCACGTCCCGGCCCTGGCGTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGACTCGTTCCCGGCGTCGACCTGGGTCTTGGTGCCCAGTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGACATAGTTAGGTTACGTACATCGGTATTAATTAGGTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGACTAGTAGTGGCGACGATTGAGGCGGATTTTCATTGTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGACAGATATTTTTTATTGGAATCACATTCTTGCAAGTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGACCTACCACTTTCCCATGTACCATTTTCCCATCGGTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGACCTTCCTCTTCGTTATCGCTGGGTTGGTATACGGTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGACGTTGCAGTAAGCTAGGCAGAACTCTGGGTTCAGCGTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAG

>NC_013852|2|2|19223-19945|CRISPRCasFinder
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	GCCTCGGTGCCCGCTGTTGAAATAGCGATGGT
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	GCCGTGTTCAGGTCCGACACGCCAGCGGTGGCC
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	GGTCTGCGGGGCCTGGCACGTCCCGGCCCTGGC
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	TCGTTCCCGGCGTCGACCTGGGTCTTGGTGCCCA
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	ATAGTTAGGTTACGTACATCGGTATTAATTAG
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	TAGTAGTGGCGACGATTGAGGCGGATTTTCATT
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	AGATATTTTTTATTGGAATCACATTCTTGCAA
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	CTACCACTTTCCCATGTACCATTTTCCCATCG
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	CTTCCTCTTCGTTATCGCTGGGTTGGTATACG
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	GTTGCAGTAAGCTAGGCAGAACTCTGGGTTCAGC
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAG

>NC_013852|2|2|19223-19945|CRT
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	GCCTCGGTGCCCGCTGTTGAAATAGCGATGGT
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	GCCGTGTTCAGGTCCGACACGCCAGCGGTGGCC
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	GGTCTGCGGGGCCTGGCACGTCCCGGCCCTGGC
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	TCGTTCCCGGCGTCGACCTGGGTCTTGGTGCCCA
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	ATAGTTAGGTTACGTACATCGGTATTAATTAG
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	TAGTAGTGGCGACGATTGAGGCGGATTTTCATT
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	AGATATTTTTTATTGGAATCACATTCTTGCAA
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	CTACCACTTTCCCATGTACCATTTTCCCATCG
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	CTTCCTCTTCGTTATCGCTGGGTTGGTATACG
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAC	GTTGCAGTAAGCTAGGCAGAACTCTGGGTTCAGC
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGAG

>NC_013852|2|2|19360-19944|PILER-CR
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGA	CGGTCTGCGGGGCCTGGCACGTCCCGGCCCTGGC
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGA	CTCGTTCCCGGCGTCGACCTGGGTCTTGGTGCCCA
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGA	CATAGTTAGGTTACGTACATCGGTATTAATTAG
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGA	CTAGTAGTGGCGACGATTGAGGCGGATTTTCATT
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGA	CAGATATTTTTTATTGGAATCACATTCTTGCAA
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGA	CCTACCACTTTCCCATGTACCATTTTCCCATCG
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGA	CCTTCCTCTTCGTTATCGCTGGGTTGGTATACG
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGA	CGTTGCAGTAAGCTAGGCAGAACTCTGGGTTCAGC
GTCCGCATTGAGACCCGCTTTCGAGGGGATTAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_013852.1\|WP_012972299.1\|12188_12761_+\|hypothetical-protein	unknown	unknown	unknown
NC_013852.1\|WP_012972317.1\|25763_26273_+\|hypothetical-protein	unknown	unknown	unknown
NC_013852.1\|WP_012972302.1\|14594_15722_+\|TIGR02584-family-CRISPR-associated-protein	csx1	pfam09623_csx1_CAS-III	gnl\|CDD\|187872
NC_013852.1\|WP_012972298.1\|11987_12173_+\|hypothetical-protein	unknown	unknown	unknown
NC_013852.1\|WP_012972316.1\|25096_25681_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312
NC_013852.1\|WP_012972301.1\|13916_14549_+\|EcsC-family-protein	unknown	unknown	gnl\|CDD\|378945
NC_013852.1\|WP_012972312.1\|21176_22118_+\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|224777
NC_013852.1\|WP_012972311.1\|20724_21042_-\|DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225495
NC_013852.1\|WP_012972306.1\|17239_17524_+\|CRISPR-associated-endonuclease-Cas2	unknown	unknown	gnl\|CDD\|187856
NC_013852.1\|WP_012972308.1\|17918_18959_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_013852.1\|WP_190275548.1\|24855_25017_-\|hypothetical-protein	unknown	unknown	unknown
NC_013852.1\|WP_012972310.1\|20368_20719_+\|hypothetical-protein	unknown	unknown	unknown
NC_013852.1\|WP_012972307.1\|17550_17922_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NC_013852.1\|WP_012972314.1\|22963_23830_+\|replication-initiator-protein-A	unknown	unknown	gnl\|CDD\|115680
NC_013852.1\|WP_012972300.1\|12750_13776_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|188593
NC_013852.1\|WP_012972304.1\|16229_16547_+\|CRISPR-associated-protein-Csx16	csx16	cd09743_csx16_CAS-I:CAS-III	gnl\|CDD\|370601
NC_013852.1\|WP_012972313.1\|22176_22671_-\|DUF4124-domain-containing-protein	unknown	unknown	gnl\|CDD\|379230
NC_013852.1\|WP_012972309.1\|20022_20319_+\|H-NS-histone-family-protein	unknown	unknown	gnl\|CDD\|376390
NC_013852.1\|WP_012972318.1\|26325_26838_+\|hypothetical-protein	unknown	unknown	unknown
NC_013852.1\|WP_012972305.1\|16626_17145_+\|PEGA-domain-containing-protein	unknown	unknown	gnl\|CDD\|378276

Protein	Function_ID	Function_description	E-value
NC_013852.1\|WP_012972302.1\|14594_15722_+\|TIGR02584-family-CRISPR-associated-protein	gnl\|CDD\|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	1.0737e-81
NC_013852.1\|WP_012972316.1\|25096_25681_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	8.20181e-16
NC_013852.1\|WP_012972301.1\|13916_14549_+\|EcsC-family-protein	gnl\|CDD\|378945	pfam12787, EcsC, EcsC protein family. Proteins in this family are related to EcsC from B. subtilis. This protein is found in an operon with EcsA and EcsB which are components of an ABC transport system. The function of this protein is unknown.	4.49081e-07
NC_013852.1\|WP_012972312.1\|21176_22118_+\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|224777	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism].	6.93378e-58
NC_013852.1\|WP_012972311.1\|20724_21042_-\|DNA-binding-transcriptional-regulator	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	4.05976e-39
NC_013852.1\|WP_012972306.1\|17239_17524_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.15179e-08
NC_013852.1\|WP_012972308.1\|17918_18959_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.42063e-89
NC_013852.1\|WP_012972307.1\|17550_17922_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	6.43628e-17
NC_013852.1\|WP_012972314.1\|22963_23830_+\|replication-initiator-protein-A	gnl\|CDD\|115680	pfam07042, TrfA, TrfA protein. This family consists of several bacterial TrfA proteins. The trfA operon of broad-host-range IncP plasmids is essential to activate the origin of vegetative replication in diverse species. The trfA operon encodes two ORFs. The first ORF is highly conserved and encodes a putative single-stranded DNA binding protein (Ssb). The second, trfA, contains two translational starts as in the IncP alpha plasmids, generating related polypeptides of 406 (TrfA1) and 282 (TrfA2) amino acids. TrfA2 is very similar to the IncP alpha product, whereas the N-terminal region of TrfA1 shows very little similarity to the equivalent region of IncP alpha TrfA1. This region has been implicated in the ability of IncP alpha plasmids to replicate efficiently in Pseudomonas aeruginosa.	1.90564e-16
NC_013852.1\|WP_012972300.1\|12750_13776_+\|radical-SAM-protein	gnl\|CDD\|188593	TIGR04078, radical_SAM_domain_protein_protein, peptide modification radical SAM enzyme, YydG family. Members of this radical SAM protein family for peptide modification occur only in the context of members of family TIGR04077, which average about 50 amino acids in length. In Bacillus subtilis, this protein (YydG) appears to act on its cognate target peptide (YydF) prior to its export, and result in the creation of a signaling molecule that induces the LiaRS two-component system. [Regulatory functions, Protein interactions].	4.59974e-23
NC_013852.1\|WP_012972304.1\|16229_16547_+\|CRISPR-associated-protein-Csx16	gnl\|CDD\|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	1.96471e-50
NC_013852.1\|WP_012972313.1\|22176_22671_-\|DUF4124-domain-containing-protein	gnl\|CDD\|379230	pfam13511, DUF4124, Domain of unknown function (DUF4124). This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.	8.56525e-10
NC_013852.1\|WP_012972309.1\|20022_20319_+\|H-NS-histone-family-protein	gnl\|CDD\|376390	pfam00816, Histone_HNS, H-NS histone family.	1.47657e-17
NC_013852.1\|WP_012972305.1\|16626_17145_+\|PEGA-domain-containing-protein	gnl\|CDD\|378276	pfam09851, SHOCT, Short C-terminal domain.	6.46879e-06

>NC_013852.1|WP_012972308.1|17918_18959_+|CRISPR-associated-endonuclease-Cas1
MNAQLLLVIDHRDTQLTLDGGALRLVTPGTKPRHIPLGVLGLVVVHGRALVGCDVWRALAERGIPAVMQPGRGRGVCAWMGPALGATGVLRAAQHRAAEQVERRLMLARDLIAAKLLAQARVIERLPVASDPPETRTAVRRQQDLALARLGQASSTTEVMGLEGSAAAAWFRWLTLWLSPTWGFQGRNRRPPRDPVNALLSLGYTLLGGEMLSVIQQQGLDPARGLLHELVPGRESLVLDLIEPLRPSVDLVLLGMLDRLLTPEDFTTSPEDGCRLSKEARGRFYQAWAQARQDWPDLQATLEDERAGTVVSLTQLCRRQTEVLRQVLKPVMTGQCSQGDEFGLEF
>NC_013852.1|WP_012972307.1|17550_17922_+|CRISPR-associated-endonuclease-Cas2
MSQSGWYLLAYDIADPRRLQRLHRAVRREGIALQRSVFLVQGTESDIEALLDRLETLMDVAKDDLRAYPVAAPSALWLQGQCVVQGHLLGDGEAATESRPSAPGWRALTTPTPPVLPFTRSQS
>NC_013852.1|WP_012972306.1|17239_17524_+|CRISPR-associated-endonuclease-Cas2
MSSRLAVFAYDIRDDRVRRHALKTLREWRLDGQLSVHECQVDAIQARRLFEQLGDELDPATDAWLFTWVEGHRAVLARGKGRTTALQDGLLLAA
>NC_013852.1|WP_012972305.1|16626_17145_+|PEGA-domain-containing-protein
MRHLPVSFLLGSTLLLTSGCATVTRGTTDTLVIESDPPGAQVTLSNGMSGQTPASFKLSRKTAVVIDIAKAGYEPVKVNVQPQISGAGGAGMAGNVLVGGLIGVAVDAGTGAMNDLKPNPIQVRLAPLAGGAASQSATAIDARLQRLAAMRRSGALTETEYRRKRAEILDGL
>NC_013852.1|WP_012972304.1|16229_16547_+|CRISPR-associated-protein-Csx16
MATYFVSRHPGAHDWAAEEGFEVEAVIVHLDPALIQPGDSVIGSLPVNLAAEVCARGARYLNLSLDLPPELRGRELSTEQMRACGARIEEYRVMRVVPGHEPASL
>NC_013852.1|WP_012972302.1|14594_15722_+|TIGR02584-family-CRISPR-associated-protein
MMSQHTTPRRILLAVTGLTPQIVTETLYALACRDEDPWIPDEVHLITTATGADNARLNLLAGERWFHRLCEDYGLPPIVFTPEQIHVLQDAEGRPLDDIRTQADNTLAADFITETLRALTADPNSELHVSIAGGRKTMGYYLGYALSLYGRPQDRLSHVLVSDPYETNRDFYYPTPYEHPIHSRRGDKEVTVDARHAHVDLADIPFVRLRDGLPERLRTGQAGFTMAVATANRGLQEPRLVLDVAQQRVWADDEEIVLSKTRFAILLWLAERARRGESTTDWSQPEVAREFLSDVATRIFNPNGGEYQRLEESLGWRIAKSCEPNEYFQPHKANINKALTHTLGKRSAERYLIGIGRGKDNSFPLVAEQIEILGD
>NC_013852.1|WP_012972301.1|13916_14549_+|EcsC-family-protein
MAQTLNQDTLMQALDWAYDKAVNGVAGLDSASDLAHDYMQRNGSRHDQAQSLIRWQSAKAATSGFLTGLGGLVTMPVTLPANITSVVYIQVRMVAAVAAMGEYDIHDDRVKVLVYACLAGNTAKDIIKSAGIVAGRKLTEQAIRGISAKTITAINQKVGFRLLTKFGQKGVINLGKLVPVAGGVIGGSLDAVATRTIGHIARETFIVAAD
>NC_013852.1|WP_012972300.1|12750_13776_+|radical-SAM-protein
MRPDSGNALVFKPTRACPARCDFCCDPSEASRERLRRTEMLALLERLTATVPGLIGTVGFTGGEPFLLFDDVQAVLERAAESGLGGAVVSSSHWATSRAEAHQRLSTLAQAGLQRYSTSCDPEHLRFVPLERIRHAVSAALELGLAVTVTGTFADPGASVAALLGEDLAAQVVCEDKLIAPFGRAVGQAATARRYGLPTDPAAWGCYRRLGHDILVQPNGDVLPCCATNNTINPLVFGNLRAGDDPTEIVQAITRSFLLRVLKFESFATLRALVTAHAPDLEWPDPAHASGPCGYCAEVFGDVERATVILEALAQAQPAYRQQLARQAGLSEATLSALAGL
>NC_013852.1|WP_012972299.1|12188_12761_+|hypothetical-protein
MRTLALCVGPGRLHLIPATQADLIVAGAEAEPPQRHETPERLTLTAPTQTRFGFSVPPAVDWTLHVPPDFDRLLVQSAGTTVISEGLAWIDVRLEGATSRFECRARHLGTLSLVGTGQQADVQVGRLERLSLDGLNNRATLVHAEAFALERHGHGLGCQVTAPSAQPGTAHRLNCRLNGLRQVVEIRHAA
>NC_013852.1|WP_012972298.1|11987_12173_+|hypothetical-protein
MSIQPQHRLTTALRAPQHGSPLWAHVGARTTAPALCAVLTAGTTPRRPELACSTSIVTIVY
>NC_013852.1|WP_012972309.1|20022_20319_+|H-NS-histone-family-protein
MSTQEELQELLEQKRLLDEKIENARKAARGQAIEQALSLITTFQLTPEDLFSSTKKGKAKSKAPPKYRDPETGKTWTGRGPIPSWLKDKNRDDYLIEA
>NC_013852.1|WP_012972310.1|20368_20719_+|hypothetical-protein
MLIERPLAYAALGLCAALALPQWNAIQSGSGTHSPAALLIAALFGAVAVFLGVRFAQSHADPRAQRRRLILWGVISAIIALFLLLVAIQVEPIWERAADVGAAFLVLLAFLYPLRR
>NC_013852.1|WP_012972311.1|20724_21042_-|DNA-binding-transcriptional-regulator
MAKQYRSEVLASIHETMEALHEMGAIDKQTMREFDDACLTPVESFPPEAIRALREREHLSQPVFARYLNVSKNLISDWERGVKRPGGPALRLLTVIEKKGIQAIA
>NC_013852.1|WP_012972312.1|21176_22118_+|DNA/RNA-non-specific-endonuclease
MFRSIRFALPILLLSISTASHAAFDACRDYFPNQTPPKVSMSPGKIRDLCMSDFAILHSGESKTAVFVVEKLNRARLIDAQDEERTDKFYEEARLPSAHRARLADYKGSGFDRGHLAPAADMPTPEAMAQSFSLANMVPQASENNRGIWAKNVEKPARQYAMRAKGDVFVFTGPVFSAKPETIGAGRVWVPSYLYKLVYDAADNKAWAYWVENTNEARMRRPISYEELLKRTGIEFLPGIKPALGGGAVAGSGPSEPAPVVRAVSTSAFGECGSKRYCKQMSSCEEAMHHLNNCGVRSLDGDGDGVPCEALCR
>NC_013852.1|WP_012972313.1|22176_22671_-|DUF4124-domain-containing-protein
MRRFVLIAPLTLLAVDAFADTLYRCQDAKGRAVFSDEPCGPSAEIVELEVHRPSAAQRREAQRRTAEAVAITDEIMRQRTRQRALAREAEIRFYQERQRQIEREKAERDAERSRTGSTRYIVRDLRPPSPPPSNGIKPPKPDRKDLKPPPKRPPKPRPPHPPRP
>NC_013852.1|WP_012972314.1|22963_23830_+|replication-initiator-protein-A
MLGTLARLEALSAERAKKRQSEETAKILQLPLPIWPDQVRGVPNVALRSALFGAIKRGPRRYMDREIVTSLDGYEVRYTGPRLDQADLDVWEQCLHLARQGGVGCRIHFTAHSFLKNIHRSTGGKDVEWLKSAFSRLASAVIEAKHGKFAYFGPMIQHGGRDDETGEYCIEMNPAIVALYGPDGWSQIDWQQRQQLKRQPLAQWLHGFYSTHAQPFPLKVKTLHQLSGSEIKQLYHFRAELKAALAKLEEATGWSWNIDEADLVHLNKIPTPSQSKHLLKKNKEKSTK
>NC_013852.1|WP_190275548.1|24855_25017_-|hypothetical-protein
MRSYAEVGYDGPERDGKPDLGNEDCNVPMNWMLLCKSCAVEFGLPNDAELETA
>NC_013852.1|WP_012972316.1|25096_25681_-|methyltransferase-domain-containing-protein
MTIDYYDTHAAAFFAETRDVDMEPLYARFLAHVQPGGRLLDAGCGSGRDTRAFLERGYAVTAFDASPTLATLASAHCGIEVETRRFQEVEWLDTFDGIWACASLLHVPLSELPEAVRRLARALKPTGVLYASFKYGSGEREHHGRRFTDLDEDRLTALVSGIEGLEIQEIWTTADRRPGRESERWLNALLQYLE
>NC_013852.1|WP_012972317.1|25763_26273_+|hypothetical-protein
MDHERARTIVANLPEIMATGDFDQIWEAFDALLQLDADAIYVCAEEVMARISLAERSREFEGEELRASLMLEVFQGSVIDYCREKCPHCDASVGHGIPSWFDSNATRIATINRNILEAALPGAGTLEDIDPRLDFEYLDADQNAMLSVTWRAIEMRIETLLSVSGYAES
>NC_013852.1|WP_012972318.1|26325_26838_+|hypothetical-protein
MSQELARDIVEMLCRIMATREFEPISAAFDNFLAADAKTIDEAAEQFIAETNVGALAAELFPGEDLRYRLTMDTFYASMLDYLCEKCPTLERSVEHDIPSWIEANAPELARFNAETMCLAMPDGGTLEDIDPRLSLANLEDRQRAMMKETWTAIEARIEALLKAMGYAEA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_013852_2	2.3\|19396\|33\|NC_013852\|CRISPRCasFinder,CRT	19396-19428	33	NC_013851.1	3139361-3139393	0	1.0

1. spacer 2.3|19396|33|NC_013852|CRISPRCasFinder,CRT matches to position: 3139361-3139393, mismatch: 0, identity: 1.0

ggtctgcggggcctggcacgtcccggccctggc	CRISPR spacer
ggtctgcggggcctggcacgtcccggccctggc	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_013852_1	1.1\|8051\|33\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8051-8083	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	8051-8083	0	1.0
NC_013852_1	1.2\|8120\|33\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8120-8152	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	8120-8152	0	1.0
NC_013852_1	1.3\|8189\|34\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8189-8222	34	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	8189-8222	0	1.0
NC_013852_1	1.4\|8259\|33\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8259-8291	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	8259-8291	0	1.0
NC_013852_1	1.5\|8328\|33\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8328-8360	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	8328-8360	0	1.0
NC_013852_1	1.6\|8397\|32\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8397-8428	32	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	8397-8428	0	1.0
NC_013852_1	1.7\|8465\|31\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8465-8495	31	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	8465-8495	0	1.0
NC_013852_1	1.8\|8532\|34\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8532-8565	34	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	8532-8565	0	1.0
NC_013852_1	1.9\|8602\|33\|NC_013852\|CRISPRCasFinder,CRT	8602-8634	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	8602-8634	0	1.0
NC_013852_2	2.1\|19259\|32\|NC_013852\|CRISPRCasFinder,CRT	19259-19290	32	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19259-19290	0	1.0
NC_013852_2	2.2\|19327\|33\|NC_013852\|CRISPRCasFinder,CRT	19327-19359	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19327-19359	0	1.0
NC_013852_2	2.3\|19396\|33\|NC_013852\|CRISPRCasFinder,CRT	19396-19428	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19396-19428	0	1.0
NC_013852_2	2.4\|19465\|34\|NC_013852\|CRISPRCasFinder,CRT	19465-19498	34	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19465-19498	0	1.0
NC_013852_2	2.5\|19535\|32\|NC_013852\|CRISPRCasFinder,CRT	19535-19566	32	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19535-19566	0	1.0
NC_013852_2	2.6\|19603\|33\|NC_013852\|CRISPRCasFinder,CRT	19603-19635	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19603-19635	0	1.0
NC_013852_2	2.7\|19672\|32\|NC_013852\|CRISPRCasFinder,CRT	19672-19703	32	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19672-19703	0	1.0
NC_013852_2	2.8\|19740\|32\|NC_013852\|CRISPRCasFinder,CRT	19740-19771	32	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19740-19771	0	1.0
NC_013852_2	2.9\|19808\|32\|NC_013852\|CRISPRCasFinder,CRT	19808-19839	32	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19808-19839	0	1.0
NC_013852_2	2.10\|19876\|34\|NC_013852\|CRISPRCasFinder,CRT	19876-19909	34	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19876-19909	0	1.0
NC_013852_2	2.11\|19395\|34\|NC_013852\|PILER-CR	19395-19428	34	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19395-19428	0	1.0
NC_013852_2	2.12\|19464\|35\|NC_013852\|PILER-CR	19464-19498	35	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19464-19498	0	1.0
NC_013852_2	2.13\|19534\|33\|NC_013852\|PILER-CR	19534-19566	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19534-19566	0	1.0
NC_013852_2	2.14\|19602\|34\|NC_013852\|PILER-CR	19602-19635	34	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19602-19635	0	1.0
NC_013852_2	2.15\|19671\|33\|NC_013852\|PILER-CR	19671-19703	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19671-19703	0	1.0
NC_013852_2	2.16\|19739\|33\|NC_013852\|PILER-CR	19739-19771	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19739-19771	0	1.0
NC_013852_2	2.17\|19807\|33\|NC_013852\|PILER-CR	19807-19839	33	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19807-19839	0	1.0
NC_013852_2	2.18\|19875\|35\|NC_013852\|PILER-CR	19875-19909	35	NC_013852	Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence	19875-19909	0	1.0
NC_013852_2	2.7\|19672\|32\|NC_013852\|CRISPRCasFinder,CRT	19672-19703	32	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	1252527-1252558	7	0.781
NC_013852_1	1.6\|8397\|32\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8397-8428	32	NZ_CP018468	Xanthomonas vesicatoria strain LM159 plasmid pLM159.1, complete sequence	100590-100621	8	0.75
NC_013852_2	2.7\|19672\|32\|NC_013852\|CRISPRCasFinder,CRT	19672-19703	32	NC_014031	Bacillus megaterium QM B1551 plasmid pBM600, complete sequence	80282-80313	8	0.75
NC_013852_2	2.7\|19672\|32\|NC_013852\|CRISPRCasFinder,CRT	19672-19703	32	NZ_CP032531	Bacillus megaterium NCT-2 plasmid pNCT2_3, complete sequence	50429-50460	8	0.75
NC_013852_2	2.3\|19396\|33\|NC_013852\|CRISPRCasFinder,CRT	19396-19428	33	NC_011143	Phenylobacterium zucineum HLK1 plasmid, complete sequence	170361-170393	9	0.727
NC_013852_2	2.11\|19395\|34\|NC_013852\|PILER-CR	19395-19428	34	NC_011143	Phenylobacterium zucineum HLK1 plasmid, complete sequence	170360-170393	9	0.735
NC_013852_1	1.2\|8120\|33\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8120-8152	33	MN694661	Marine virus AFVG_250M209, complete genome	28394-28426	10	0.697
NC_013852_1	1.4\|8259\|33\|NC_013852\|PILER-CR,CRISPRCasFinder,CRT	8259-8291	33	MN604407	Salmonella phage ST-3, complete genome	29709-29741	10	0.697
NC_013852_2	2.4\|19465\|34\|NC_013852\|CRISPRCasFinder,CRT	19465-19498	34	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	64363-64396	10	0.706
NC_013852_2	2.4\|19465\|34\|NC_013852\|CRISPRCasFinder,CRT	19465-19498	34	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	229606-229639	10	0.706
NC_013852_2	2.7\|19672\|32\|NC_013852\|CRISPRCasFinder,CRT	19672-19703	32	NZ_CP041069	Bacillus megaterium strain KNU-01 plasmid pKNU_01_5, complete sequence	17528-17559	10	0.688

1. spacer 1.1|8051|33|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

tttgagttcgatgctgcttaaactgatcgaaaa	CRISPR spacer
tttgagttcgatgctgcttaaactgatcgaaaa	Protospacer
*********************************

2. spacer 1.2|8120|33|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

tccattataaatatcagctccacaaatagggca	CRISPR spacer
tccattataaatatcagctccacaaatagggca	Protospacer
*********************************

3. spacer 1.3|8189|34|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

cctcctcggaggcatccatagcctcttttgcaga	CRISPR spacer
cctcctcggaggcatccatagcctcttttgcaga	Protospacer
**********************************

4. spacer 1.4|8259|33|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

ggaaacaacgatgtcttccaggtcattgccgtt	CRISPR spacer
ggaaacaacgatgtcttccaggtcattgccgtt	Protospacer
*********************************

5. spacer 1.5|8328|33|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

atatggtgtgctccttcgcccaagatcttgagg	CRISPR spacer
atatggtgtgctccttcgcccaagatcttgagg	Protospacer
*********************************

6. spacer 1.6|8397|32|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

atgagcgcgagtgaacatatccatcacacccc	CRISPR spacer
atgagcgcgagtgaacatatccatcacacccc	Protospacer
********************************

7. spacer 1.7|8465|31|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

cgtgtcctctgcccatttcttgaactcccgg	CRISPR spacer
cgtgtcctctgcccatttcttgaactcccgg	Protospacer
*******************************

8. spacer 1.8|8532|34|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

ccttgttacatcccgtccaagcgtcttcgtaaaa	CRISPR spacer
ccttgttacatcccgtccaagcgtcttcgtaaaa	Protospacer
**********************************

9. spacer 1.9|8602|33|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

cgggattgagcgcttaataacggccatgactgg	CRISPR spacer
cgggattgagcgcttaataacggccatgactgg	Protospacer
*********************************

10. spacer 2.1|19259|32|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

gcctcggtgcccgctgttgaaatagcgatggt	CRISPR spacer
gcctcggtgcccgctgttgaaatagcgatggt	Protospacer
********************************

11. spacer 2.2|19327|33|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtgttcaggtccgacacgccagcggtggcc	CRISPR spacer
gccgtgttcaggtccgacacgccagcggtggcc	Protospacer
*********************************

12. spacer 2.3|19396|33|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

ggtctgcggggcctggcacgtcccggccctggc	CRISPR spacer
ggtctgcggggcctggcacgtcccggccctggc	Protospacer
*********************************

13. spacer 2.4|19465|34|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

tcgttcccggcgtcgacctgggtcttggtgccca	CRISPR spacer
tcgttcccggcgtcgacctgggtcttggtgccca	Protospacer
**********************************

14. spacer 2.5|19535|32|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

atagttaggttacgtacatcggtattaattag	CRISPR spacer
atagttaggttacgtacatcggtattaattag	Protospacer
********************************

15. spacer 2.6|19603|33|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

tagtagtggcgacgattgaggcggattttcatt	CRISPR spacer
tagtagtggcgacgattgaggcggattttcatt	Protospacer
*********************************

16. spacer 2.7|19672|32|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

agatattttttattggaatcacattcttgcaa	CRISPR spacer
agatattttttattggaatcacattcttgcaa	Protospacer
********************************

17. spacer 2.8|19740|32|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

ctaccactttcccatgtaccattttcccatcg	CRISPR spacer
ctaccactttcccatgtaccattttcccatcg	Protospacer
********************************

18. spacer 2.9|19808|32|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

cttcctcttcgttatcgctgggttggtatacg	CRISPR spacer
cttcctcttcgttatcgctgggttggtatacg	Protospacer
********************************

19. spacer 2.10|19876|34|NC_013852|CRISPRCasFinder,CRT matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

gttgcagtaagctaggcagaactctgggttcagc	CRISPR spacer
gttgcagtaagctaggcagaactctgggttcagc	Protospacer
**********************************

20. spacer 2.11|19395|34|NC_013852|PILER-CR matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

cggtctgcggggcctggcacgtcccggccctggc	CRISPR spacer
cggtctgcggggcctggcacgtcccggccctggc	Protospacer
**********************************

21. spacer 2.12|19464|35|NC_013852|PILER-CR matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

ctcgttcccggcgtcgacctgggtcttggtgccca	CRISPR spacer
ctcgttcccggcgtcgacctgggtcttggtgccca	Protospacer
***********************************

22. spacer 2.13|19534|33|NC_013852|PILER-CR matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

catagttaggttacgtacatcggtattaattag	CRISPR spacer
catagttaggttacgtacatcggtattaattag	Protospacer
*********************************

23. spacer 2.14|19602|34|NC_013852|PILER-CR matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

ctagtagtggcgacgattgaggcggattttcatt	CRISPR spacer
ctagtagtggcgacgattgaggcggattttcatt	Protospacer
**********************************

24. spacer 2.15|19671|33|NC_013852|PILER-CR matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

cagatattttttattggaatcacattcttgcaa	CRISPR spacer
cagatattttttattggaatcacattcttgcaa	Protospacer
*********************************

25. spacer 2.16|19739|33|NC_013852|PILER-CR matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

cctaccactttcccatgtaccattttcccatcg	CRISPR spacer
cctaccactttcccatgtaccattttcccatcg	Protospacer
*********************************

26. spacer 2.17|19807|33|NC_013852|PILER-CR matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

ccttcctcttcgttatcgctgggttggtatacg	CRISPR spacer
ccttcctcttcgttatcgctgggttggtatacg	Protospacer
*********************************

27. spacer 2.18|19875|35|NC_013852|PILER-CR matches to NC_013852 (Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence) position: , mismatch: 0, identity: 1.0

cgttgcagtaagctaggcagaactctgggttcagc	CRISPR spacer
cgttgcagtaagctaggcagaactctgggttcagc	Protospacer
***********************************

28. spacer 2.7|19672|32|NC_013852|CRISPRCasFinder,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 7, identity: 0.781

agatatttttta-ttggaatcacattcttgcaa	CRISPR spacer
-gctcctttttacttggaatcacattcttagac	Protospacer
 * * .****** ****************. *

29. spacer 1.6|8397|32|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018468 (Xanthomonas vesicatoria strain LM159 plasmid pLM159.1, complete sequence) position: , mismatch: 8, identity: 0.75

atgagcgcgagtgaacatatccatcacacccc	CRISPR spacer
acctgcgcgagtgaacgtctccatcacgcatc	Protospacer
*.  ************.* ********.* .*

30. spacer 2.7|19672|32|NC_013852|CRISPRCasFinder,CRT matches to NC_014031 (Bacillus megaterium QM B1551 plasmid pBM600, complete sequence) position: , mismatch: 8, identity: 0.75

agata-ttttttattggaatcacattcttgcaa	CRISPR spacer
-catatttttttattgtaatcaccttctttttt	Protospacer
  *** ********** ****** ***** .

31. spacer 2.7|19672|32|NC_013852|CRISPRCasFinder,CRT matches to NZ_CP032531 (Bacillus megaterium NCT-2 plasmid pNCT2_3, complete sequence) position: , mismatch: 8, identity: 0.75

agata-ttttttattggaatcacattcttgcaa	CRISPR spacer
-catatttttttattgtaatcaccttctttttt	Protospacer
  *** ********** ****** ***** .

32. spacer 2.3|19396|33|NC_013852|CRISPRCasFinder,CRT matches to NC_011143 (Phenylobacterium zucineum HLK1 plasmid, complete sequence) position: , mismatch: 9, identity: 0.727

ggtctgcggggcctggcacgtcccggccctggc	CRISPR spacer
gagggggcaggcctggcacgtctcggccatggc	Protospacer
*.   *  .*************.***** ****

33. spacer 2.11|19395|34|NC_013852|PILER-CR matches to NC_011143 (Phenylobacterium zucineum HLK1 plasmid, complete sequence) position: , mismatch: 9, identity: 0.735

cggtctgcggggcctggcacgtcccggccctggc	CRISPR spacer
cgagggggcaggcctggcacgtctcggccatggc	Protospacer
**.   *  .*************.***** ****

34. spacer 1.2|8120|33|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to MN694661 (Marine virus AFVG_250M209, complete genome) position: , mismatch: 10, identity: 0.697

tccattataaatatcagctccacaaatagggca	CRISPR spacer
agatgtataaatatcaactccaccaatagtaga	Protospacer
     ***********.****** ***** . *

35. spacer 1.4|8259|33|NC_013852|PILER-CR,CRISPRCasFinder,CRT matches to MN604407 (Salmonella phage ST-3, complete genome) position: , mismatch: 10, identity: 0.697

ggaaacaacgatgtcttccaggtcattgccgtt	CRISPR spacer
catgctcacgatgtcttcaaggtcatagccgtg	Protospacer
 . . . *********** ******* *****

36. spacer 2.4|19465|34|NC_013852|CRISPRCasFinder,CRT matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

tcgttcccggcgtcgacctgggtcttggtgccca	CRISPR spacer
ccctcgggggcgtcgacctgggtttcggtgccgt	Protospacer
.* *.   ***************.*.******

37. spacer 2.4|19465|34|NC_013852|CRISPRCasFinder,CRT matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 10, identity: 0.706

tcgttcccggcgtcgacctgggtcttggtgccca	CRISPR spacer
ccctcgggggcgtcgacctgggtttcggtgccgt	Protospacer
.* *.   ***************.*.******

38. spacer 2.7|19672|32|NC_013852|CRISPRCasFinder,CRT matches to NZ_CP041069 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_5, complete sequence) position: , mismatch: 10, identity: 0.688

agatattttttattggaatcacattcttgcaa	CRISPR spacer
cgtatttttttattgtaatcaccttctttttt	Protospacer
 *   ********** ****** ***** .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_013851_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013851_1

2845-2936

Orphan

Consensus_repeat	Method
GTTCCACGTGGAACATTCGGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013851_1

>merge|NC_013851|1|2845-2936|CRISPRCasFinder
GTTCCACGTGGAACATTCGGACGCCGTTTCAGAGTTTCCCGGTCCGGCGTTTCACGGATCACGCTCGATGTTCCACGTGGAACATTCGGGCG

>NC_013851|1|1|2845-2936|CRISPRCasFinder
GTTCCACGTGGAACATTCGGACG	CCGTTTCAGAGTTTCCCGGTCCGGCGTTTCACGGATCACGCTCGAT
GTTCCACGTGGAACATTCGGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013851.1\|WP_012969257.1\|10274_10745_+\|Hsp20-family-protein	unknown	unknown	gnl\|CDD\|182691
NC_013851.1\|WP_012969254.1\|5646_6762_-\|carotenoid-1,2-hydratase	unknown	unknown	gnl\|CDD\|377781
NC_013851.1\|WP_012969255.1\|6761_9275_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NC_013851.1\|WP_012969249.1\|231_1593_+\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|273037
NC_013851.1\|WP_012969250.1\|1691_2792_+\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|235541
NC_013851.1\|WP_012969253.1\|4569_5571_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|320697
NC_013851.1\|WP_043795722.1\|10898_11210_+\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|225753
NC_013851.1\|WP_012969260.1\|11882_13235_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340430
NC_013851.1\|WP_012969252.1\|4061_4523_-\|hypothetical-protein	unknown	unknown	unknown
NC_013851.1\|WP_012969261.1\|13277_14522_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NC_013851.1\|WP_012969259.1\|11226_11886_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_013851.1\|WP_012969256.1\|9271_9925_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222

Protein	Function_ID	Function_description	E-value
NC_013851.1\|WP_012969253.1\|4569_5571_-\|hypothetical-protein	gnl\|CDD\|320697	cd07338, M48B_HtpX_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase. This HtpX family of peptidase M48 subfamily B includes uncharacterized HtpX homologs and consists of proteins smaller than Ste24p, with homology restricted to the C-terminal half of Ste24p. HtpX expression is controlled by the Cpx stress response system, which senses abnormal membrane proteins. HtpX participates in the proteolytic quality control of these misfolded proteins by undergoing self-degradation and collaborating with FtsH, a membrane-bound and ATP-dependent protease, to eliminate them. HtpX, a zinc metalloprotease with an active site motif HEXXH, has an FtsH-like topology, and is capable of introducing endoproteolytic cleavages into SecY (also an FtsH substrate). However, HtpX does not have an ATPase activity and will only act against cytoplasmic regions of a target membrane protein. Thus, HtpX and FtsH have overlapping and/or complementary functions, which are especially important at high temperature; in E. coli and Xylella fastidiosa, HtpX is heat-inducible, while in Streptococcus gordonii it is not.	0.00918218
NC_013851.1\|WP_012969257.1\|10274_10745_+\|Hsp20-family-protein	gnl\|CDD\|182691	PRK10743, PRK10743, heat shock chaperone IbpA.	4.49247e-62
NC_013851.1\|WP_043795722.1\|10898_11210_+\|PepSY-domain-containing-protein	gnl\|CDD\|225753	COG3212, COG3212, Predicted membrane protein [Function unknown].	8.79934e-14
NC_013851.1\|WP_012969254.1\|5646_6762_-\|carotenoid-1,2-hydratase	gnl\|CDD\|377781	pfam07143, CrtC, CrtC N-terminal lipocalin domain. This family contains the members of the old Pfam family DUF2006. Structural characterization of family member NE1406 (from DUF2006 now merged into this family) has revealed a lipocalin-like fold with domain duplication.	2.65933e-79
NC_013851.1\|WP_012969255.1\|6761_9275_-\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	1.67479e-15
NC_013851.1\|WP_012969260.1\|11882_13235_+\|sensor-histidine-kinase	gnl\|CDD\|340430	cd16954, HATPase_PhoQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. PhoQ is the histidine kinase (HK) of the PhoP-PhoQ two-component regulatory system (TCS), which responds to the levels of Mg2+ and Ca2+, controls virulence, mediates the adaptation to Mg2+-limiting environments, and regulates numerous cellular activities. Providencia stuartii AarG is a putative sensor kinase which controls the expression of the 2'-N-acetyltransferase and an intrinsic multiple antibiotic resistance (Mar) response in Providencia stuartii. The AarG product is similar to PhoQ in that it is able to restore wild-type levels of resistance to a Salmonella typhimurium phoQ mutant. However, the expression of the 2'-N-acetyltransferase gene and of aarP (a gene encoding a transcriptional activator of 2'-N-acetyltransferase) are not significantly affected by the levels of Mg2+ or Ca2+. Most proteins in this group contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have an accessory HAMP sensor domain, and some have an intracellular membrane -interaction PhoQ sensor domain.	3.58297e-37
NC_013851.1\|WP_012969249.1\|231_1593_+\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|273037	TIGR00362, DnaA, chromosomal replication initiator protein DnaA. DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair].	0
NC_013851.1\|WP_012969250.1\|1691_2792_+\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|235541	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated.	6.87185e-159
NC_013851.1\|WP_012969261.1\|13277_14522_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	6.46082e-14
NC_013851.1\|WP_012969259.1\|11226_11886_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.09326e-70
NC_013851.1\|WP_012969256.1\|9271_9925_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.03912e-93

>NC_013851.1|WP_012969250.1|1691_2792_+|DNA-polymerase-III-subunit-beta
MEFVANREIVLPALNKVIGVVERRQTLPILGNLLVVARAGRVTLTGTDLEVEVKTSFEAEIQQEGETTIPARKLVDICRNLSEGAEIRLRVKDERCVVTSGRGRFTLGLLPAADFPTMDLEEGGFDFQIQESQLKRLLDKTAFAMAQQDVRYYLNGLLLELHATVLIAVATDGHRLAKFVTPLDLTLDTERQVIVPNKTVMELKRQLGSSDDPISIRLSERSLRVVVGAMTMTSKLVDGRYPEYERVIPGHSGRTATVEKDALKRALSRTSILSNEKYRGVRLSFDPGTLKLLAHNPEQEEAEEEIELEYDGEPISIGFNVAYLMDVLGVIDETAVIIHFQDANGSSIWRGVGGESETFVVMPMRL
>NC_013851.1|WP_012969249.1|231_1593_+|chromosomal-replication-initiator-protein-DnaA
MSGNAVALWEHCINQLKAELTSAEFNTWILPLQARVDGPLLRLLAPNRFVLDWTRKHYADRLLELCARHSQGEVSEIHFEVGEFARESGPAKGKGARAGSKASVIDSDLATRRAAANLNADFNFDTFVEGKSNQLARAASIQIARNPGGTYNPLFIYGGVGLGKTHLMHAVGNVILASNPSARVVYLHSERFVAEMIKALQHNRIEDFKKTYRSVNALLIDDVQFFAGKERSQEEFFHTFNALLESGQQIVLSSDRFPKEVTGLEERLRSRFGWGLTVAIDPPDLETSVAILHCKATQLGVELPEDVAFFVGRRIRSNIRELEGALRRLVANAHFTGKPITLEFAKQALRDVLVAQDRQVSLENIQRTVADYYKLRTSDLLSAKRSRSLARPRQLAMALAKELTKHSLPEIGQAFGGRDHTTVLHATRKIKSLRESDATIEEDYRNLLRMLTL
>NC_013851.1|WP_012969252.1|4061_4523_-|hypothetical-protein
MPFTTLSSGALWGLLLMLLTFGTVQADSTAEVERILSDIRQDQPLPRLDYLHPVAPINPGCAAFEGRYGAVAIQVETHPDSPRVASLLLQIPGPDQTRALLPAVSRALGPPHSQDRRQSVYGWDWPDYRTASLHYVHGDSSAPGLTIVSLFYR
>NC_013851.1|WP_012969253.1|4569_5571_-|hypothetical-protein
MKPPPPQIRWEIDIPLATNPRLLKTLALVAGLAALIPSLFMSVILAAQGEWDGIPALAGLFALVGVGLFVSFVLIALIVFGNRLRTRYTLDAQGIHQETIDRTSRLVNRLTVLGGAASGQPGPTGAGLTARARESERLDWRGGFSLQVQPRAHRLIFRNAWRPLMEVYCTPENFVQIEALARHFMSQHHTSERTPARSPLPSYLGHSMLILLAAFILFTVHDEFDLDLFAPILVMAFALATLWLIPLFGYVVLLVNAGILASLVMASLEERVSYIRPSERYRHYEVFSDADWALLGFGLLALGYLSWLAWRAARGRLLSLLMRDQDDQTGPGG
>NC_013851.1|WP_012969254.1|5646_6762_-|carotenoid-1,2-hydratase
MHRRTCLLALAGLPLTRIVAATAPATDSAGAETDPAIAFDAVLPGRVLRFPDDEGAHPGFRTEWWYVTGWLKGADDDPLGFQITFFRVRTGIGEDNPSAFAPRQLLLAHAAIADPRLGRLRHDQRAARVGFERAGYATDRTHVWLDDWSFEQSDQHYATRVNAEDFAYDLRLAFTGAPMLNGDHGFSRKAPDPRHASYYYSRPHLQVEGQLTLDGRRHAVSGRAWMDHEWSSAYSPEGADGWDWVGLNLDDGGALMAFRMRRPDGTALWAGATRRFPDGRTRSLAPEQVEWLPLRRWRSPRTGIEYPVEWSLRIGGRRYDLRPLMDDQELDSRRSTNTLYWEGAIHILEAGREIGRGYLEMTGYGDRIQVG
>NC_013851.1|WP_012969255.1|6761_9275_-|FtsX-like-permease-family-protein
MRLAPVFFGSLTRRRAATLLSFAAIALGVALGMAVQAVNQAALTEFGRGLRTLAGAADLQVVGPRGGFDEALYTQLAARPEVAQASPVLEVWTERIGSTDTLRLLGLDLFVIGAVTPALWPRPAEIEGQSGHEARFAALAEDSLFLSAAAQTALAVKPGDRLSVYAGSQPLELRVAGDIPGAAEDRRLAVMDIAAVQKHFARIGRLTRIDLRLVEGLDVQAARAVLEPRLPAGVWLEVPQAAEGQASNLSRAYRVNLTLLAAMALVTGAFLVFSAQALSVVRRHTELAFLRAIGVGRRQLLAWLLAEGAIVGLLGAVVGVMLGHGLAFGLLRLLGGDLGAGFFAGLSPTLRIDPWATGVYVLLGVGAGVAGAWLPAREAARIAPAQALKATDDSVLSQRRGYPRLGLILMAAGLPLCALPPIQGLPIGGYLAIFGLLAGSILWLPMLASGLARVVPLRGPVPVRLAAARLRAAPGMSAVAATGVLASVALVVAMAIMVNSLRGSVDVWLGQILPADLYLRAGRAQSGGVLNEALQARLADVPGVARIEFTRHESLRLASGQPPVALLARPVSPDGRELPLVGSAHAVAEGETAIWISEALHDLQGWRPGDRVRLPLAGSEVPVQVAGIWRDYARQTGSLMLDLADYRRLSGDHSAQDAAIWLAPGVDTLSVAEALKAAGGSGALEVTVPGEIRAISLRIFDRAFAVTYVLEAAAVIIGLAGVAASFAALAAARRREFGLLRHLGLTRGQIGVLLALEGSLAAGVGILGGLTVGGAIAWILIEVVNRQSFHWSMDLSVPWLSLLVFAGTLATLASLAAVLAGRQAMREDAVLAVREDW
>NC_013851.1|WP_012969256.1|9271_9925_-|ABC-transporter-ATP-binding-protein
MLEICDLYRQFNGRPVLQGISMRLKPGEYVAITGESGVGKSTLLNVIAGLDRPDRGRLVLDGEDYAALDEDALTRLRRDKLGFVFQAFHILPHLTLRQNVALPLWLKGQGGRRADRQAEHLLDAVGLGDRAESWPRELSGGEMQRVAIARALAHKPRLILADEPTGNLDPTNAARVLRLLGERIRSAGAMGILVTHSPEAARSADRVLQLTPEGLHE
>NC_013851.1|WP_012969257.1|10274_10745_+|Hsp20-family-protein
MSTLDFSPLFRSMIGFDRLANALETAYRTEPGGYPPYNVELLDENRYRITLAVAGFTEAELGIEAKENLLTVTGQRQANESEGNFLYRGIANRAFERRFQLADYVKVQEARLENGLLHIDLVREVPEAMKPRRIEIRAAGASPAIEHASTERPKAA
>NC_013851.1|WP_043795722.1|10898_11210_+|PepSY-domain-containing-protein
MTPVAHLSCLLLISALTFNVSVLADHLDHDSVKRLRDDGRILSMSEVMRRAARIRPGQLLEAELDRDDGRYVYEILILDATGRVHELELDAASGVLIESSYDD
>NC_013851.1|WP_012969259.1|11226_11886_+|response-regulator-transcription-factor
MRLLLVEDDPAQIAALLPALNAAGFAVDQAQDGAIGERLGETEPYDVIVLDLGLPKRPGLEVLRHWRARGLSLPVLILTARDAWPERVDGLKAGADDYLGKPFHVEELIARLNALTRRAAGNLRPALAVGGLSLDADRQQVICPDGEVRELTGTEFRLLRYLMLNPGRILSKAQLLEHVYELEAERGDNLIEVYIRRLREKIGRDRIQTLRGQGYLLKR
>NC_013851.1|WP_012969260.1|11882_13235_+|sensor-histidine-kinase
MTSLEGRLHLGLALSLALLIGSAWWLGHAALHHTANAFVLSRLEHDAEGLLGALRFDAPGIPRLESPRLTPVYEQPYSGHYFVIVPATGEPLRSRSLWDTDLESPALQPGETRHWTLQGPNEQYLVAWAEGYRFGDRDLVVVMAEDIRPLSAELRHFERLFAIMAVAGLLLSLLIQRLIVRRAFAGLRPIYRDIEQLEHGRIVTLSEDVPREMQPLVRKLNRLLVLLGQRLERSRTAAGNLSHALKGPLVLLRQYLSDPKLHLTPETRAGLLDQVEHLRRIAERQLKRARLAGAGGVGEFFEPAAELPVLKRLLERIHAGRALRIDLECVIDAPLALDREDMLELLGNLLDNACKWARERVRARLHVEAGTLVLLVEDDGPGCSEDAIADITERGVRLDEEVGGHGLGLAIVKEIVAGYQGVLGFERAGELGGLRVDVRLPLQDQGLDGR
>NC_013851.1|WP_012969261.1|13277_14522_+|TolC-family-protein
MDSHSPLTSKTGHRRRARLILFCLLLTSATASAGTLGEAIDSALDLEGQRARVGALRDEGEATRRQAESLVAGDPGLRVKHLSDQAIANEGAYEWEAMVELPLWMPGQRTARQAVAAALGEQAETLAGLLRWEMAGRVREAVWNARLTQGRADQAAQALANARALATTVDKRLAAGDLARVDALVAHQAVLDREAEHQSARMEAEEALARYRHLTGQTTLPDDSDEAVPPDLSDQLPPDHPLMREADSAVGVARRQRDQARSERTGHPVLSLGTTVTRDARGADQNTALQLELSIPFGLASQSAPSIAAAERVYTEQASERQSLLRQAEAELIAAHLGRRGAAESLAIAERRQEAAREAFALVRRAFELGEADLTTRLRAEDSAREANVALELRRLEQGRARARLNQALGVIPQ

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Crispr_ID: NC_013851_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013851_2

711826-711933

Orphan

Consensus_repeat	Method
ATCGCCGCGCTCGAAGCCGAGCTGGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013851_2

>merge|NC_013851|2|711826-711933|CRISPRCasFinder
ATCGCCGCGCTCGAAGCCGAGCTGGAGCAGGCGCGTGCCCAGGATGGGGACGCTGAGGCGCTGAGCGCGGCTCAGGCACGGATCGACGCGCTCGAAGCCGAGCTGGAG

>NC_013851|2|2|711826-711933|CRISPRCasFinder
ATCGCCGCGCTCGAAGCCGAGCTGGAG	CAGGCGCGTGCCCAGGATGGGGACGCTGAGGCGCTGAGCGCGGCTCAGGCACGG
ATCGACGCGCTCGAAGCCGAGCTGGAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013851.1\|WP_012969843.1\|720069_723159_+\|discoidin-domain-containing-protein	unknown	unknown	gnl\|CDD\|366285
NC_013851.1\|WP_012969833.1\|705420_706128_-\|GMP/IMP-nucleotidase	unknown	unknown	gnl\|CDD\|237882
NC_013851.1\|WP_148217447.1\|706069_707056_+\|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|239249
NC_013851.1\|WP_012969841.1\|716654_718079_-\|beta-glucosidase	unknown	unknown	gnl\|CDD\|274539
NC_013851.1\|WP_012969828.1\|699245_699833_+\|hypothetical-protein	unknown	unknown	unknown
NC_013851.1\|WP_012969840.1\|714694_716770_+\|glucans-biosynthesis-glucosyltransferase-MdoH	unknown	unknown	gnl\|CDD\|235476
NC_013851.1\|WP_012969848.1\|730140_731334_-\|o-succinylbenzoate-synthase	unknown	unknown	gnl\|CDD\|239436
NC_013851.1\|WP_012969847.1\|728532_730128_-\|peptidoglycan-glycosyltransferase	unknown	unknown	gnl\|CDD\|274573
NC_013851.1\|WP_012969838.1\|712590_714156_+\|glucan-biosynthesis-protein-G	unknown	unknown	gnl\|CDD\|237328
NC_013851.1\|WP_012969835.1\|707174_709295_+\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|235537
NC_013851.1\|WP_012969844.1\|723182_726584_+\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|225990
NC_013851.1\|WP_012969826.1\|694941_697047_+\|penicillin-binding-protein-1C	unknown	unknown	gnl\|CDD\|227289
NC_013851.1\|WP_012969836.1\|709291_710506_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NC_013851.1\|WP_012969830.1\|701365_702622_-\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NC_013851.1\|WP_148217548.1\|699822_701319_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NC_013851.1\|WP_012969842.1\|718081_719881_-\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|226646
NC_013851.1\|WP_012969845.1\|726593_727136_+\|hypothetical-protein	unknown	unknown	unknown
NC_013851.1\|WP_012969839.1\|714140_714698_+\|hypothetical-protein	unknown	unknown	unknown
NC_013851.1\|WP_012969831.1\|702826_703153_-\|thioredoxin-TrxA	unknown	unknown	gnl\|CDD\|181812
NC_013851.1\|WP_148217446.1\|697206_699231_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657

Protein	Function_ID	Function_description	E-value
NC_013851.1\|WP_012969843.1\|720069_723159_+\|discoidin-domain-containing-protein	gnl\|CDD\|366285	pfam00754, F5_F8_type_C, F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.	3.30802e-06
NC_013851.1\|WP_012969833.1\|705420_706128_-\|GMP/IMP-nucleotidase	gnl\|CDD\|237882	PRK14988, PRK14988, GMP/IMP nucleotidase; Provisional.	6.70448e-72
NC_013851.1\|WP_148217447.1\|706069_707056_+\|thioredoxin-fold-domain-containing-protein	gnl\|CDD\|239249	cd02951, SoxW, SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.	2.10031e-31
NC_013851.1\|WP_012969841.1\|716654_718079_-\|beta-glucosidase	gnl\|CDD\|274539	TIGR03356, BGL, beta-galactosidase.	0
NC_013851.1\|WP_012969840.1\|714694_716770_+\|glucans-biosynthesis-glucosyltransferase-MdoH	gnl\|CDD\|235476	PRK05454, PRK05454, glucans biosynthesis glucosyltransferase MdoH.	0
NC_013851.1\|WP_012969847.1\|728532_730128_-\|peptidoglycan-glycosyltransferase	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	3.55987e-88
NC_013851.1\|WP_012969838.1\|712590_714156_+\|glucan-biosynthesis-protein-G	gnl\|CDD\|237328	PRK13274, mdoG, glucan biosynthesis protein G; Provisional.	0
NC_013851.1\|WP_012969835.1\|707174_709295_+\|phosphate-acetyltransferase	gnl\|CDD\|235537	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed.	0
NC_013851.1\|WP_012969844.1\|723182_726584_+\|glycosyl-transferase	gnl\|CDD\|225990	COG3459, COG3459, Cellobiose phosphorylase [Carbohydrate transport and metabolism].	0
NC_013851.1\|WP_012969826.1\|694941_697047_+\|penicillin-binding-protein-1C	gnl\|CDD\|227289	COG4953, PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell envelope biogenesis, outer membrane].	0
NC_013851.1\|WP_012969836.1\|709291_710506_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NC_013851.1\|WP_012969830.1\|701365_702622_-\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NC_013851.1\|WP_148217548.1\|699822_701319_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	3.07922e-58
NC_013851.1\|WP_012969842.1\|718081_719881_-\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|226646	COG4178, COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only].	3.16458e-137
NC_013851.1\|WP_012969848.1\|730140_731334_-\|o-succinylbenzoate-synthase	gnl\|CDD\|239436	cd03320, OSBS, o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway. Menaquinone is an essential cofactor for anaerobic growth in eubacteria and some archaea. OSBS belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	2.5446e-43
NC_013851.1\|WP_012969831.1\|702826_703153_-\|thioredoxin-TrxA	gnl\|CDD\|181812	PRK09381, trxA, thioredoxin TrxA.	2.11667e-55
NC_013851.1\|WP_148217446.1\|697206_699231_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	4.16193e-68

>NC_013851.1|WP_012969836.1|709291_710506_+|acetate-kinase
MKVLVLNSGSSSIKYQLFRVQDWQALASGLVARIGEPEGEVKLNWLDSDEVSHSSQESLPISSHEQGIDYIIRALRDSGVLVEVGELAAIGHRVVHGGVRFKQPARIDDSVIEAIREVVPLAPLHNPGHLAGIEAACSHFPGVPSVAVFDTAFHQTMPPAAYRYAIPEALYTEHRIRRYGFHGTSHHYVAKRAAELLGKPLDQCNLISLHLGNGASATAIRAGQCVDTSMGLTPLEGLVMGTRSGDIDPAVVIYLCKHLGLDADGLDRLLNRQSGLLGLCGVNDMREIDQLAAAGDERAELAIAITTHRLKKYIGAYYAELGRVDALVFTGGIGENAAEIRRRACEGLERLGIRLDTELNASRAQRGERCISLPESEVRVLVVPTNEELEIAQQALRTVADIDR
>NC_013851.1|WP_012969835.1|707174_709295_+|phosphate-acetyltransferase
MQSIYIAGAGAGSGKSVVVLGFMEMLSAIGRRIGFFRPFAPRGAELDNLTALIRERYALPFPPEMLYGCTVETARQFIGSGRYDELLKLIMNKFKMLEEQCDLVVCAGTDYNGLIPSLEFGFNVDLANNFGCSLVAVVKGFGRTPQEAWDALHITHELMRERGGDFLATVVNGVAPQDLETVRGRVQHLLTETETIYVLPEQQALGMPTVGEIRQALGAECLYGEGDALHQVVTNYKIAAMEIPDFLRYVEDGCLIITPGDRSDIILASLAADASSAFPRVAGLLLTGGLRPADKVRDLIEGLRRTKVAILQVPTDTFTTAMHVSRIESSLLPGDDRKIAAALGVFEANVDLDELRGRIAVHHTERVTPLMFEYELIRRAKSRRQRIVLPEGGDERILRAAEILSLRQVADLILLGNPERIQRRAAELGLDLGDIRIIDPIDSPDRDRYARTYYELRKHKGISEQMAHDVLADVSYFGTLMVYHGDADGMVSGATHTTQHTIRPSFETVKTKPGVKLVSSVFFMCLPDQVLVYGDCAVNPNPDSEELADIAISSAQTATAFGIEPRIAMLSYSSGSSGKGEDVDRVREAVRLVRERRPDLKVEGPIQYDAAVDIEVGRSKMPDSEVAGHATVLIFPDLNTGNNTYKAVQRSAGAVAIGPVLQGLNKPVNDLSRGCTVTDIVNTVAITAIQAQGESIAAAANEECAR
>NC_013851.1|WP_148217447.1|706069_707056_+|thioredoxin-fold-domain-containing-protein
MSRKTVSIRGQSMGALVVVMGYRVRTGIRRLMLVTAIWLAVGTQVWALDIRADLEAAVAAGKRGLMVYFDQEDCAYCERFKQVNLADPDILAYLQRHFDLISVDIHGRAEVRTLDGERLDVQTWARREQTDFTPSILFYDADGRLALWLRGYHPPYAFRAALEYVADGHDRRESFDDYLARGDERLVFDSEDLNDQPFFSPPPHVLDRRIPAERPLAVFFERGDCHPCDVLHDQVRRSPEIRRRFEALDTVQLDRRSETPVITPAGERTTARAWADALGLQHAPAILFFDGRGRELQRLDSVAGFRRLSQRLDDILASDRASCQVESP
>NC_013851.1|WP_012969833.1|705420_706128_-|GMP/IMP-nucleotidase
MTTTNAPIDWPRIDTVFLDMDGTLLDLHFDNHFWLEHVPRRYGEARGLSFEAARAELHARYRDIAGTLDWYCVDHWSRELGLDILLLKREVEHLIAVHPHVPDFLEALAALGKRRVLVTNAHQKTLALKLERTPLAGHLERVVSAHDLGIAKESPAFWPAFQAIEPFDPERSLFVDDNLDVLRTARAYGFRRLLAVLAPDSRQPPRQTDEFPAISDFSALLPGLAAAAQSTVSGA
>NC_013851.1|WP_012969831.1|702826_703153_-|thioredoxin-TrxA
MSDSIVHVTDDSFEEEVLKSPDPVLVDYWADWCGPCKMIAPVLDEIADEYAGRVKIAKLNIDENPNTPPRYGIRGIPTLMLFRGGEVEATKVGAVSKSQLTAFIDSNL
>NC_013851.1|WP_012969830.1|701365_702622_-|transcription-termination-factor-Rho
MNLTELKKMPVPNLVALAQSMDIEGVGRSRKQDLIFAILKAQAKKGEDIYGDGVLEILSDGFGFLRSADASYLAGPDDIYVSPSQIRRFALRTGDTISGKIRPPKDGERYFALLKVNDINFDRPENAKSKILFENFTPLFAQKRLTLEIGNGSTEDITARTIDLVAPIGKGQRGLIVSPPKAGKTMMLQNIAQSIGHNHPDCYLIVLLIDERPEEVTEMARSVRGEVISSTFDEPATRHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNVEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMEIHMDRRIAEKRIFPAININRSGTRREELLMGQAELQKMWILRKILHPMDELAAMEFLHDKLKATKTNDEFFSSMKG
>NC_013851.1|WP_148217548.1|699822_701319_+|diguanylate-cyclase
MVTEPLRGVARHLSSRLEGYLALVFGLLGLMLMLLIASHWFLVLEPTLRAEAESRATVLAQSQIQGLERLLDEDRDPEQLRRDLLAALGSILLFKDGSTQEHFIQRISLMFDYDIFRVRRGSLDLDLGSTVCERCFVARIPLYHPEDRVLVGVATCYSSPRFLHDLTGNLGTTLVWVVGFILLSTGYAWFQTQRFLRRLRESENNLRAVFEAAPFPMLLQAEDASRPHRANVAAKRYLELRETPDGALDSAAWRDLASVALPSRDGETREVRFDGLEQDRKHWALVSSTPMNFSGIPSRLIGLADISELKAIQDELRAASFTDPLTGLYNRRYLYQRLAHEIDLANRYKHPLAVILFDLDLFKRINDTFGHGVGDDVLVCVSGTLKSCIREVDVAGRHGGEEFLVILPHADLTEATEVAERIRASVAQISWSVEGLAATISGGVAQHCGESLDAFLDVADRRLYMAKDSGRNRILAAPVGIVPDRTVAPATATRIAAR
>NC_013851.1|WP_012969828.1|699245_699833_+|hypothetical-protein
MNTADTRSLFLGLLLGVMPLIVLHSAPGEGQTLWREDEQRVRVGLKLFPACVGALESIEDWLTPRGVLLVLVVHTGSGASARPVVANLESVDRIRDYPLEVRLVSAAEFDDYSGARPVGVFVASADLEPRRLRGWSERHRTLVFSPFAGAVEGGAIAGVHVADRVLPFVSPTRARRAGLRFKPFFLDVARLYDGD
>NC_013851.1|WP_148217446.1|697206_699231_+|TonB-dependent-receptor
MRTLGCSIIAMRRLSTALVLSVCFQSVVSAGSDEREDLLALLDRATELATKSGMNANFVPGMATILSGDDLLQRGARTVWESLALVPGLSLGLEMTGERQVLSRGVGHGYASGNIKIMLDGISMNSSLLATANSVLDIPIEQVERIEVIRGPGSSVHGEYAYAGVINVITRKRERQVRLQAGEDMGSGLGAIWYWDDPQRDLSLSLNLAGLESDDAGVRISEDALAALGESSLSNAPGHSNEAQRYKAAFTNLQWRDFFLDLKLIEDDYGDHFGINHFLPPADGNLATRQELVSAQAGFDPRLSETLSAKLRLEFLRQQRDRRRLYVFPASYLADEPIYMNQDYQETRHRGSADVFWRPNDEHTALFGLELSRITIEQAKWEWTNLPFEIPSTWLDTDHDRTIVGLVAQDEYRASDRLTLTATLRYDDYSDAGSMLSPRAAAVWRFDASNILKAQYARAFRPPTFYELEYAAQTDLEASEIDTFELGYILTRPRWEARATLFHSDLTDPILFAESDDEGYVNSEDVRLRGVELEYVQRLGTRWKIDANLSYVDAVRPDSDTAVPGGARWLGNLALLWRPHERWTAALQLNYIGERSRVDYESRQDLDDSTTLDLTLNYQTAAKGVSLHAGVKNLGDTRVYYPDILTSYGGVELIYPDGYPRAGRRWWVSLAYAF
>NC_013851.1|WP_012969826.1|694941_697047_+|penicillin-binding-protein-1C
MMRRYRIGLLLAVGLVIGAGAGVWLWFDDWIDTAPLPEIALATSPQILDREGRLLRAFPVADGRWRLPVALDAVDPRYLDRLLAIEDRRFRDHAGVDPLALMRAAWQWLRYGRIVSGGSTITMQLARLLDGRSTRDLAGKLHQMRLALALERQLDKDAILSAYLNLTPQGGNLEGVRAGALAWFGHEPHRLTATESALLIALPQAPEARRPDRDPETLRRACAAILQRLHAAGLIDTIELAGALREPVPSARRPFPMLAAHLAWRAHRAHPERSIQRLTLDARLQERLETLAAERARALGERVSLAILVADHTTGEIHAAVGSPDPLDEARRGHVDMTRAIRSPGSTLKPLIYGLAFEDGIAHPESLIEDRPTGFDGYAPTNFDRAFQGTVSVRHALQASLNIPAVRLLEAVGPARLTARLRRAGVEPVLPDGSAPGLAIGLGGVGVTLTDLVRLYAAIARGGSPVVLRVSLERETTDDDPIRRHGSRIARPSRPVLDERAAWLVGSILAGVPAPDRATAERIAFKTGTSYGYRDAWAIGFDGRWVVGVWTGRADGAPVPGLAGIEAAAPILIDVFAQLGRRAPLPPPPPGVRPMTHAQLPEILRHVPAASRASASVTALEIAYPPPGARIDLGFGSARTESLVLRVRGGTPPFTWFADSGPIAREPFSRAARWIPTGPGYVTLVVVDGRGESARVRVRLD
>NC_013851.1|WP_012969838.1|712590_714156_+|glucan-biosynthesis-protein-G
MTLARLFGILVIGSTLVSGIPLRADDTPGLVEPAPSEGAPGAFTFAAVVRRAQELATTDYQPDRPALPDYLADLDYDQYRDIRFDRDESLWKAEGLPFQMQFFPRGFLFKDRVTVNVVEEGVSQVVPFQHDLFDYGRNQVPEEMPADLGFAGLRLLYPVNRDDMFDEVVVFLGASYFRGVSKGLNYGITARGLAIDTGLPTQEEFPIFREFWVFKPAPDAVDITVFALLDSESVTGAYSFVIRPGIETVMDVKARLFMRQSVQKLGIAPLTSMFLHGENTDRFMDDFRPEVHDSDGLLVVNGTGERIWRPLTNPLGLRVSGFVAENPRSFGLFQRDRTFGHYEDLEAHYQNRPSALVEPIGDWGRGTVELVEIPSDAERYDNIVAYWMPERKPEPGDELKLEYRLRFGLDPEAGLLGGRAVSTRIGAAGADVPDSSRRKFVVDFAGQSLAQMSPETEVEAVVTSTSGELSQPVVQWNPNTQGWRLFFELRPDGREPADLRAFLRQGHDVLSETWSYRWVQE
>NC_013851.1|WP_012969839.1|714140_714698_+|hypothetical-protein
MGSGVIDRLDVLDAPAPASWSTPEDHAVVDRRVRLYLNALGVQDPHETEVLVRRVIERVEFRATLGQLGEPLEVAIEETHRLLDRWLIAELGLDAEPDQLSAARAAVLGGHLPGWTRRWAGLSEVSLAESIRAVRFQAVPERAPLNMEPNPIRLCCHRLMRRLLARVGRWLGISGRRHAVPEVHP
>NC_013851.1|WP_012969840.1|714694_716770_+|glucans-biosynthesis-glucosyltransferase-MdoH
MNRYGVSTFAARYLPRPLYFTLVLLTTVFCLSLLSSAIQDGGLSTLEIVLLILYTILMLWISASFWTAAIGFMVLALQGRWGERAAPEPAASAETGAFKTALVMPVYNEDPERVFAGLRAMFDSLVATGHSDGFEFFVLSDTREPDIWLQEEQHWRRWSEELGDRVPLFYRNRVENTARKSGNLADFCRDWGGRYRYMIVLDADSIMSGETLVEMVRRMEADRRLALIQVPPVPVNRSSFFARMLQFAGSLYGRLFVAGLAFWQRDTANFWGHNAIIRVRPFADHCGLPKLPGREPFGGDILSHDFVEAALLARAGWKVRLAPDLGGSYEEIPPTLIDYAKRDRRWCQGNLQHARLILAQGFKPLSRLHFAMGVMSYAASPLWLLFLIATGAEAYFKSLQQTVYFFGYNVMPIWPESYVVEMTTVLWVTLVLLFLPKILALVLLALDRDEAQRFGGLLKASLSVLIESLLSVLLAPVLMLFQSKFVAAILLRTSVGWPAQQRGDHQTGVLEALGAHGVHTLIAFAVGYVAYVHVPDFFWWFTPVLAGLVLSVPVSILTSRTSLGLRLKEAGLFLTPAETEEPPVLRRLEERLAESSPPIEAPAGERAFWTRAMMNPGVYALHDALLHDEPQTRRRRHILEGLTLQLQDEGEDSLSLREQRALLSHRDGLHLLHTRLWAAPTLDAPPPLANG
>NC_013851.1|WP_012969841.1|716654_718079_-|beta-glucosidase
MAAPFPDDFLWGAATSAYQIEGSPLADGAGPSIWHRFAHTPGRVAGHDTGDLACDHYHRSLEDVALMAELGLSAYRFSLAWGRVLPEGRGAVNSRGLDFYERLVDALLEHGIQPMATLYHWDLPVALHERGGWLNPDSPHWFAEYAGTVFRALDDRVPLWITLNEPWVVTVPGYLDGQLAPGHRDLFEPPRVANHLLLAHAEAVAAYRALGRHRIGLAVNLEPQHPASPSPADLEAARRRDAFINRWFLDALVFGRYPEELADIFGPAWPEFSAESLAKIRCPGDFIGVNYYSRGLVRAAPEAPPLDAIRITPTDAELTAMDWEVYPEGLTETLLWLRDRYANPPLYITENGAAFDDPPPRDGLVEDPRRVAYLRAHIRAAATALEQGVDLRGYCVWSLLDNFEWAEGYSKRFGLYQVDPGDRTRRPKTSACFYREVIRSRGAAVRPASAPPTAGCATNAARHDATATPAARAD
>NC_013851.1|WP_012969842.1|718081_719881_-|ABC-transporter-ATP-binding-protein/permease
MRFPWSLLNALKVPITPAIWNRFVRMLQQLGASEVGGRAKALFVLLILFLFAINGLNVINSYVNRDFMTAIENQDMGGFVHYALLFIFVLGISTVVAVIYRYTEERLGLLWRKWLTERAIDRYLDERTYFRLHSAGELPNPDQRISEDIRALTATTLSFTLMFLNASFTVVAFSGVLWTISPLLFVVAVAYSILGSILTIYLGKPLVRLNYDQLDREANFRARLVHVRENAESVALLRREERLNARLRDRLNQLTANFQRIIEVNRNLGFFTTGYNYLIQIIPALLVAPLFIQGEAQFGVITQSAVAFAHLLGAFSLIVTQFQSISNYTAVVARLNALREAMDQERPEQAPRVEFCEECGSVAFEHLTLHSPRDGRVLIEDLSLSLPAGVSLLVRSTSEAAEKALFRATADLWPHGTGRILHPGHDVIFFLPERPYVPPGTLREVLLRPCQERWLPDWKILASLESLSLTPALNKAGGLDTERNWSDLLSLGEQQRLSFARVLLAAPRFVFLDHPSRSLSECPLGELLNLLRQQGITYFTLGDPGDDPRFYDRLLEIAADGSWRLRLPVSDDDPGREPSPPHGGRRRTDRANRSDDVED
>NC_013851.1|WP_012969843.1|720069_723159_+|discoidin-domain-containing-protein
MHILDLDDFSDLSVWSSVVSGQARLDLAADAGPEGEGGAMRLDFDFGEGGGFVVARRTVRLTLPDSFAILLRVRAEAPANAFEFKLIDPSGENVWRFRDESFDFDSDWRALRIGSRAMAFGWGPAGGGAPTQVGAVEIAITAGPGGRGCLWIADLRIEDRTPSQPPAIRASSERPGQGAACILDGRSDTAWRPAQRPAWVELDCHEPCDYSALMLHWDSPEPRTFEILAGDDGAHWTRLQAVSSARGQRNTVYLPEGCSRFLRLALAGGEGDPVPGLVGLELKPETFARSIEDFVHRLAEQAPRGRYPRWLYREQTYWTPIDIPDGTVPALFNEEGLIEVWRAGPAIEPLLSVQGERLTWADCTVEPSLLQPPLPIPRSTWSTEGRRFETLAFAHGAPGRVWLFIRYRLENLGTAPLNATLQIAIRPVQVSPPWQGYRDIGGVARIDRIAWEQGDVRVDGRLALVPLSTPTGFGAMAFDTEAIDEPVAAVASSKTAAVEDGLGLASAALRFDLDVAPGAHREIWLAAPLGEHEDAHPRELAGAAGAVESHLKAALDQWSQRLGAVELHLPEIARDAWEGCQGALAHILINRDGPALQPGPRRYTRSWIRDGATMGAALRRFGLKGEAVDFIDWYAGFQAEDGKVPCCVDRQGVDWLPEHDSPGQFIFAVADAWRFGADRARLEALWPAVCRAVDYLERLRTERLTPPYQEPERRACLGLLPESVSHEGYLAHPVHAYWDDFWALRGLKDAAELAEALGDGERAGHFARLRDAFSAALYVSLDRVMEERGIDFLPGSVEWADHDPTATANALTLIDESHRLPVAAMQRTFDQFMQRFRAVHGSDPVPWTNYSAYEIRIAGALIRLGRRAEAHELLRCYLAERRPAVWNQWPEITWRDPRSPGHQGDLPHAWIGAEYCLVFRDLFVYERGADRSLVIGAGLPVEWLAAGEIRVRRLPTSYGRLDLDIARFDGGAVQMRVGGELRLPPGGLWVAPPLPGPLTRVEIDGEPSRDFNATEAHLTTLPAEIVLVG
>NC_013851.1|WP_012969844.1|723182_726584_+|glycosyl-transferase
MQQFFDPHGPESSLHRLSNGSLEALISESGAGQLRWNGLALTRWHADPVEDDLGSLLYVRDLDSGAVWSLGYQPTRVEPRVYRVGCQDDRFRLEREDQGIALRLDLSLDATRDLERRCVRLTNVSDRARRIELTSYLEVVLFPSEADAAHPAFAKLFVQTERDASTGALLARRRPRGQGESWPWMIHALLGAEAVQWETDRARFIGRGRNRTRPAALFGSAPEAGSLSGRLGNVLDPILSLRTVIELQPGAGSELTWITGAAPDRAAALALLDGESLKTSVSASSLSTDDEAPASRDADDELAESTQDLRFFNGYGGFSADGRRYEIQLPYQGSAGHRRPPQPWINVIANPDFGCLVSESGAGYTWSRNSQANRLTPWFNDPVGDPHGEALYVRDEATGESWSPLPGPRPAPAGYRVTHGLGFTRFALQYAGLEQETTLFVPRHDPLRVLRLRLTNPGAGTRRLSLLGYQRLVMGQQPSSGSAIVTAIEPASGLLRAINPEAGDFAGGIVFATAIVSGGAVIERDFTTDRLSVIGRHRDLADPVALEPGRRLDGRQGEVRDPCFAQRLRVSLEPGATLVCDWLLGEAMSETQLGDLLQGYADPAAIGAAFDEAVAFWDDLVSHVQVETPEPAIDLMLNGWLLYQNLGCRIWARSAFYQSGGAYGYRDQLQDAAALAAIRPDITRAQILLHAAHQFVEGDVLHWWHPAPLERGLRTRFSDDLLWLPFVLAHYVRMTGDVGLLDEIQPYLAAPELAPGQDENYLTPVLSGESGDLYDHGCRAIDRSLTRGVHGLPLMGTGDWNDGMNRIGRAGHGESVWMGFFLYRVLSDFLPLCERRGDQARLDRYRACQAELERALETSGWDGDWYRRAYYDDGTPLGSAADAECRIDALAQAWAALSGAVPRARAEQALDSLERHLASEPDRLIRLLTPPFVDTPHDPGYIKGYVAGVRENGGQYTHAACWAVAAMAELGRHEQAAPWLARLSPVSHTRTSADVRRYRLEPYVVAADVYGEPPHVGRGGWSWYTGSAGWWYRVALESVLGLRIENGRELVIRPCIPASWPGFRLRYRLPDGVTECEIQVDNGDGGGVVIAASLDDRPLTIQSGAARAVLPVGPGRHSIRVKLGASPVSAPTP
>NC_013851.1|WP_012969845.1|726593_727136_+|hypothetical-protein
MSLTATRARPLIAAVLLGALAPATTLRADDIEPLSVAVIKATTGLCKRGETCHTDRAGSWTPKKAIAILAVSVAEQADIDLYADIEVSTRPEMYQCSGDDSRGCIFRAKYAGPGLVDYAATSGSTYVGSNITNTTITFPSGYGLMVQAGEPIYVHLDVRNGSLIDLQVDQDAWIYYVEAD
>NC_013851.1|WP_012969847.1|728532_730128_-|peptidoglycan-glycosyltransferase
MNVSLDIDPWSAARLALQAAFFLTLFLLVKQLFDLRDAARLKHLSRPKGAFRTPMTGLMALFGAVLLYQATWQLTGLYRPQFVAFMQSHDRREFNPAHWIQRGRLLDRRGEVLAESLEREGRVQRHYPDGPVFAPVVGYTHPRFGASGMEAVVSRQLDGGDPNSLKDLGELGRRILGGDKRPRGRDVVLTIDAELQRLAVERLGARRGAVVMLDPRDGAVRVLASVPAHDPNRIDAELFSGSDPATPLLNRATQGLYPPGSTFKIAVAALALERGFNGTLACPGDGFTTASHYRKIRDHEYYSARRTGHVWEGYGRLGLERALAVSSNVFFAQLGVLQGHDAFQELTERLGFNGQILLHQSTYGRFAMRTGHWPALAANDQYGLAQAAIGQGRLLVSPAYMALLTGALANQGVAVRPRLIATARPEVLARFMHPDVANRLAAMLRRVVTEGTARAIDIPELAIAGKTGTAENPQGDAHSWFVGFAPAERPALAVAVLVEHGGYGSATAAPIARDLLQRAHALGLMPSASKP
>NC_013851.1|WP_012969848.1|730140_731334_-|o-succinylbenzoate-synthase
MIEHAGFRPYELPLRHAWNSARGGFAQRCGWLVWVEADGLTGYGDCAPLPAAGTETHEAAGAALARLTASLPGQDVATGLAALDADGDTSETPAARFALECALTDLASRHQGLSLRDWLAPDSAPIARISVNAMLGPLGTVRGEDLVTRHAQGFRVLKLKVGVETPASDLDALIALMRPPLVGAGLDVGLRLDANGAWSFDQARRLIERLIQLRLPIESIEEPLTEPTPERLAALQALAPFPLALDESLPARFATHDTSRLAGTDPAQFGVRRLVLKPAALGGLRRTLELARRAQAAGIEVVVTSLVESAAGLWPTAQLAGAIASPIPQGLATADWLAADLGRAPRPCAGRLELPDRSGSGFVPWPPASTDSGTQEARAVEPVSGDDPNPGANPSLG

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Crispr_ID: NC_013851_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013851_3

756777-762359

TypeI-E

I-E

Consensus_repeat	Method
CGGTTCATCCCCGCGAGCGCGGGGAACGG	PILER-CR
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CRISPRCasFinder
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CRT
CCGGTTCATCCCCGCGAGCGCGGGGAACGG	PILER-CR
CGGTTCATCCCCGCGAGCGCGGGGAACGG	PILER-CR

91 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas3

The CRISPR arrays of NC_013851_3

>merge|NC_013851|3|756777-762359|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR
CGGCTCGTCCCCGCGAGCGCGGGGAACGGGATTCCTGGATGAGCCTTGTTTCGGTCCCAATCGGTTCATCCCCGCGAGCGCGGGGAACGGTGGGCGTCGACGCGATCGCGCCATTCGGTGTCCGGTTCATCCCCGCGAGCGCGGGGAACGGCGCACCCAGCCGAGGATGTATCGAGAAAAATCCGGTTCATCCCCGCGAGCGCGGGGAACGGCGCCAAGCGCCCACGGTCGGCCACATCTGGAACGGTTCATCCCCGCGAGCGCGGGGAACGGGGAACCAAGATCCTCCGTGACGCGGACCCCGAAGGTTCATCCCCGCGAGCGCGGGGAACGGCCGGCGCGGGACTCGGCTCCACATCGATGGGGCGGTTCATCCCCGCGAGCGCGGGGAACGGTCGGTGCTGGACTCGGGAATATTCAGCGCGGTCGGTTCATCCCCGCGAGCGCGGGGAACGGTGCAGAGCGGTCACTGATTCTGGAACAGAGGGCGGTTCATCCCCGCGAGCGCGGGGAACGGTTCAGCGCGGTCTTGAACGCCTCGAATGTGATCGGTTCATCCCCGCGAGCGCGGGGAACGGGTGTACACCACCTTTTCTAAGTAAAACAAGCACGGTTCATCCCCGCGAGCGCGGGGAACGGTATTGTCAGACCCATCAGAAATAGACCATAGCCGGTTCATCCCCGCGAGCGCGGGGAACGGCTCGACAGCAAGCGCTTCCTCTTCCAGCAGGACGGTTCATCCCCGCGAGCGCGGGGAACGGGACGGCAGGATAGTACGATGCGCGATTTCGTCCGGTTCATCCCCGCGAGCGCGGGGAACGGCTGTGATGCGTCGTTTTTTATTCCTGATTTTACGGTTCATCCCCGCGAGCGCGGGGAACGGAGGTCAGAGCCGCGCAGGGCCAAATACGCGCGCGGTTCATCCCCGCGAGCGCGGGGAACGGGCGGCATCGGTGCCGTAGCCGGCCTCCAGCGCCGGTTCATCCCCGCGAGCGCGGGGAACGGGACATCACGCCGCCGATCTGCGTGCCGTCGAGCGGTTCATCCCCGCGAGCGCGGGGAACGGGGTCTGACGAATGGTTTGAGGCCCGCTGCGGACGGTTCATCCCCGCGAGCGCGGGGAACGGCGCGCCAATTTGCACCGCGCAACGCCGGACGCCGGTTCATCCCCGCGAGCGCGGGGAACGGCCCCTTACGCGGCTTGGACGTATCCTCACAGCCGGTTCATCCCCGCGAGCGCGGGGAACGGTTATAGCGCGATGTGGCTCCAACGGCATCGAGCGGTTCATCCCCGCGAGCGCGGGGAACGGTCGGACTGGGATTTGGGGATAAGGTCAAGAGGCGGTTCATCCCCGCGAGCGCGGGGAACGGAAGAGCCAGAAATCAAGGCCTAAATGCCGGTGCGGTTCATCCCCGCGAGCGCGGGGAACGGCAACCTGCGTCTAATCCTGGAGAATGACCCCGCGGTTCATCCCCGCGAGCGCGGGGAACGGGCGCCCTGGCCCGATTCCGGAGCCAGGCACCGACGGTTCATCCCCGCGAGCGCGGGGAACGGGTCATGCGCCGTCGGCACAGACGAGAACGCTACGGTTCATCCCCGCGAGCGCGGGGAACGGGCGAGCGGTGCGCGGGTGCCGGTCTTGGTCGCCGGTTCATCCCCGCGAGCGCGGGGAACGGCAACTCTACGTTTGCAATTCGATTGCGCAATTCGGTTCATCCCCGCGAGCGCGGGGAACGGTATCTGTGAGGCCACTAGTCAACGACTAATCGCGGTTCATCCCCGCGAGCGCGGGGAACGGGAGGTATTCATTCATTTTTGAATCGATCTGACCGGTTCATCCCCGCGAGCGCGGGGAACGGTTTTCTCGCTCATTGGTCGCCTCGTGACGCATCGGTTCATCCCCGCGAGCGCGGGGAACGGTTGTTCGCGGCCCTGCTCAAGAATGCGGGCCACGGTTCATCCCCGCGAGCGCGGGGAACGGTCTACATCGCCATGAAGGGCGCTAACATCCTGCGGTTCATCCCCGCGAGCGCGGGGAACGGCCGGACATGGATTACAGCGCACGGCGCAGCCACGGTTCATCCCCGCGAGCGCGGGGAACGGAGCCGTCTGCTGGGCCTGGGCGGTCTCAGGGGCGGTTCATCCCCGCGAGCGCGGGGAACGGTGAGCGGGAAATTGGGTCACGGTGTCGCCGGACGGTTCATCCCCGCGAGCGCGGGGAACGGATTCGCGATCGGGCGCAAGAGGAGGCTGAGACCGGTTCATCCCCGCGAGCGCGGGGAACGGGCCCCGGATCTGGCCATGCAGCCGTATGCCTACGGTTCATCCCCGCGAGCGCGGGGAACGGATCACCTGCTCGGGTTCTGCGATTCCCCCACCCGGTTCATCCCCGCGAGCGCGGGGAACGGCAGCCGCCCGCCGAAGGATTGATACAGGATAACGGTTCATCCCCGCGAGCGCGGGGAACGGTCCTGTTCCTCGTGGCTGGCGATGGCTGTGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGAACGCCCTACAGCTCGCGCGGCAGAACGAGATCGGTTCATCCCCGCGAGCGCGGGGAACGGGAGGCCCTGCCTGCGTATCACGGTGGGCAGGGCGGTTCATCCCCGCGAGCGCGGGGAACGGGTGCCTTCGCCCGTCCAGCCGGTCCAGCCATGCGGTTCATCCCCGCGAGCGCGGGGAACGGAGCCGGGATCTTGACACCGCATTTGAGCAGATCGGTTCATCCCCGCGAGCGCGGGGAACGGGCGATAAAGCGCTTGTTCGCGCTGTTCGATACCGGTTCATCCCCGCGAGCGCGGGGAACGGTCACCCTGCGCTTCCTGATCCTGGAGTAAGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGACAAACGAGGGCGCGGATACCGACCGCTGGATCGGTTCATCCCCGCGAGCGCGGGGAACGGCCGGGTCTTCAAACGTAGTGGAGCCAATAACACGGTTCATCCCCGCGAGCGCGGGGAACGGTCAGCCATGTCGGTCGTCAGATCCTGCAAATTCGGTTCATCCCCGCGAGCGCGGGGAACGGCCGGGTCTTCAAACGTAGTGGAGCCAATAACACGGTTCATCCCCGCGAGCGCGGGGAACGGGTATTTGATGCGGTCGAATACCTATTCAATAAAGGTTCATCCCCGCGAGCGCGGGGAACGGACCTCTGAGCCGGGGTTAATGGTGCTCATGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGACGGCACGCAGCGAGACATCTGCCTCCAGCACCGGTTCATCCCCGCGAGCGCGGGGAACGGCGGTAGGTCTCGTCGTCGAGACCCAGATCCTTCGGTTCATCCCCGCGAGCGCGGGGAACGGCCACGTATAGGAAGCGCGAAAATCAGGGCGCGCGGTTCATCCCCGCGAGCGCGGGGAACGGATGTTCGTGGTTTAGTGGGTAGGCATATTCACCGGTTCATCCCCGCGAGCGCGGGGAACGGACCGTGGATCCGGTCGGACGCTGGCGATAGACCGGTTCATCCCCGCGAGCGCGGGGAACGGCCGCCCAGACCGTCCAGGAGGCTCCTGGCGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGGCTGAATCCCCGGATGATGGGGCGCGGGTCGCCGGTTCATCCCCGCGAGCGCGGGGAACGGACGCCGAACGGCTCTGGGCGTGCTCGGGTCGCCGGTTCATCCCCGCGAGCGCGGGGAACGGTTCACCGGAATCGGGAAAACGTCGGGATCGACCGGTTCATCCCCGCGAGCGCGGGGAACGGGATCAGAGTAATCATGCGAGTGACGCCAACCGCGGTTCATCCCCGCGAGCGCGGGGAACGGTGTCTTATATCTCTAATTCGCAGTCCATTATGCGGTTCATCCCCGCGAGCGCGGGGAACGGACTTTGATATCCTGTCTTTATCATTAAAGAACCGGTTCATCCCCGCGAGCGCGGGGAACGGACGGCACGCAGCGAGACATCTGCCTCCAGCACCGGTTCATCCCCGCGAGCGCGGGGAACGGCGAGGACTGCAAGTCCTGGCTGCGCTCGCCGACGGTTCATCCCCGCGAGCGCGGGGAACGGGCAAGGTCCAGAGCACGAAAGAAATTAGGCGGCGGTTCATCCCCGCGAGCGCGGGGAACGGGAAATCCATTTCGGGCGAATCCAACGGGGCGTCGGTTCATCCCCGCGAGCGCGGGGAACGGAGCGATTTTTTCGATTCACTGCCGACTGTTTACGGTTCATCCCCGCGAGCGCGGGGAACGGGGCAGCGAGTTCCTCGACGAGATGGTGCGCACCGGTTCATCCCCGCGAGCGCGGGGAACGGAACAAGGCTGATGCGACCCGCGCGAAAGCGTTCGGTTCATCCCCGCGAGCGCGGGGAACGGTCGAGCAACCGCAGCGCGTTCGGGAACTGCGTCGGTTCATCCCCGCGAGCGCGGGGAACGGGGTGGCGCTGCTGTGCTATGACGAGCTGACGCACGGTTCATCCCCGCGAGCGCGGGGAACGGTGTCATTCCTCCCGCCCGGCGCAGTCATAAAGCGGTTCATCCCCGCGAGCGCGGGGAACGGCGGAGCAAGGCCGCAGTAGCCGCGACGGCGAGCGGTTCATCCCCGCGAGCGCGGGGAACGGACCGAATCCCCGACGACCCCAGGATCCCAAGACGGTTCATCCCCGCGAGCGCGGGGAACGGCGGCTGTCATCGCATTTATGGGTCTCAAGCGGCGGTTCATCCCCGCGAGCGCGGGGAACGGGTACGGACGCAGCGACTCTTGGTGGCGCTGTGCGGTTCATCCCCGCGAGCGCGGGGAACGGTTGTATCTATCTGAGTAGGTGTTCCAATGAACCGGTTCATCCCCGCGAGCGCGGGGAACGGCTGTCCTGATGTCGGCGACTCGGGACTCTGAACGGTTCATCCCCGCGAGCGCGGGGAACGGCTAAAAGCATCCCGAGGGAGCGTATAAGGCCGCGGTTCATCCCCGCGAGCGCGGGGAACGGAGCGTCAGCCGCTCCGCGATGGCTAGTCCAGGCGGTTCATCCCCGCGAGCGCGGGGAACGGGCGCCGGGCGTGCGATCGATCTCGTCAAATATCGGTTCATCCCCGCGAGCGCGGGGAACGGCTCCCCAAACCACCGCCAGAAGTTCCTCACCCCGGTTCATCCCCGCGAGCGCGGGGAACGGGCCAACAATCCAGCCACCATCACTAGCGCTCGCGGTTCATCCCCGCGAGCGCGGGGAACGGTTCCCAGGTTTGGCGTGTTTTTCCCTGGCTTTCGGTTCATCCCCGCGAGCGCGGGGAACGGGGGGCGGGCGTCTGTAGATTGGGCCGCGTCAGCGGTTCATCCCCGCGAGCGCGGGGAACGGGTTTACCGACAAGCCCCCGGACATGCGAATCAACGGTTCATCCCCGCGAGCGCGGGGAACGGGCGTGTTTTTCCCCGGCTCTCTTCGGCGTGCACGGTTCATCCCCGCGAGCGCGGGGAACGGGGAGTTCTGCCAATAATTGTGGTGGAACCTGTCGGTTCATCCCCGCGAGCGCGGGGAACGG

>NC_013851|3|1|756777-758941|PILER-CR
CGGCTCGTCCCCGCGAGCGCGGGGAACGG	GATTCCTGGATGAGCCTTGTTTCGGTCCCAAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGGGCGTCGACGCGATCGCGCCATTCGGTGTC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCACCCAGCCGAGGATGTATCGAGAAAAATC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCCAAGCGCCCACGGTCGGCCACATCTGGAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGAACCAAGATCCTCCGTGACGCGGACCCCGA
AGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGCGCGGGACTCGGCTCCACATCGATGGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGGTGCTGGACTCGGGAATATTCAGCGCGGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGCAGAGCGGTCACTGATTCTGGAACAGAGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCAGCGCGGTCTTGAACGCCTCGAATGTGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTGTACACCACCTTTTCTAAGTAAAACAAGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TATTGTCAGACCCATCAGAAATAGACCATAGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTCGACAGCAAGCGCTTCCTCTTCCAGCAGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GACGGCAGGATAGTACGATGCGCGATTTCGTC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTGTGATGCGTCGTTTTTTATTCCTGATTTTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGGTCAGAGCCGCGCAGGGCCAAATACGCGCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGGCATCGGTGCCGTAGCCGGCCTCCAGCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GACATCACGCCGCCGATCTGCGTGCCGTCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGTCTGACGAATGGTTTGAGGCCCGCTGCGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCGCCAATTTGCACCGCGCAACGCCGGACGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCCCTTACGCGGCTTGGACGTATCCTCACAGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTATAGCGCGATGTGGCTCCAACGGCATCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGGACTGGGATTTGGGGATAAGGTCAAGAGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AAGAGCCAGAAATCAAGGCCTAAATGCCGGTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAACCTGCGTCTAATCCTGGAGAATGACCCCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGCCCTGGCCCGATTCCGGAGCCAGGCACCGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTCATGCGCCGTCGGCACAGACGAGAACGCTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGAGCGGTGCGCGGGTGCCGGTCTTGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAACTCTACGTTTGCAATTCGATTGCGCAATT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TATCTGTGAGGCCACTAGTCAACGACTAATCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAGGTATTCATTCATTTTTGAATCGATCTGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTTTCTCGCTCATTGGTCGCCTCGTGACGCAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTGTTCGCGGCCCTGCTCAAGAATGCGGGCCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCTACATCGCCATGAAGGGCGCTAACATCCTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGACATGGATTACAGCGCACGGCGCAGCCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCCGTCTGCTGGGCCTGGGCGGTCTCAGGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGGTGAGCGGGAAATTGGGTCACGGTGTCGCCGGACGGTTCATCCCCGCGAGCGCGGGGAACGGATTCGCGATCGGGCGCAAGAGGAGGCTGAGACCGGTTCATCCCCGCGAGCGCGGGGAACGG	GCCCCGGATCTGGCCATGCAGCCGTATGCCT
ACGGTTCATCCCCGCGAGCGCGGGGAACGG	ATCACCTGCTCGGGTTCTGCGATTCCCCCAC
CCGGTTCATCCCCGCGAGCGCGGGGAACGGCAGCCGCCCGCCGAAGGATTGATACAGGATAACGGTTCATCCCCGCGAGCGCGGGGAACGGTCCTGTTCCTCGTGGCTGGCGATGGCTGTGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGAACGCCCTACAGCTCGCGCGGCAGAACGAGATCGGTTCATCCCCGCGAGCGCGGGGAACGGGAGGCCCTGCCTGCGTATCACGGTGGGCAGGGCGGTTCATCCCCGCGAGCGCGGGGAACGGGTGCCTTCGCCCGTCCAGCCGGTCCAGCCATGCGGTTCATCCCCGCGAGCGCGGGGAACGGAGCCGGGATCTTGACACCGCATTTGAGCAGATCGGTTCATCCCCGCGAGCGCGGGGAACGGGCGATAAAGCGCTTGTTCGCGCTGTTCGATACCGGTTCATCCCCGCGAGCGCGGGGAACGGTCACCCTGCGCTTCCTGATCCTGGAGTAAGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGACAAACGAGGGCGCGGATACCGACCGCTGGATCGGTTCATCCCCGCGAGCGCGGGGAACGGCCGGGTCTTCAAACGTAGTGGAGCCAATAACACGGTTCATCCCCGCGAGCGCGGGGAACGGTCAGCCATGTCGGTCGTCAGATCCTGCAAATTCGGTTCATCCCCGCGAGCGCGGGGAACGGCCGGGTCTTCAAACGTAGTGGAGCCAATAACACGGTTCATCCCCGCGAGCGCGGGGAACGGGTATTTGATGCGGTCGAATACCTATTCAATAAAGGTTCATCCCCGCGAGCGCGGGGAACGGACCTCTGAGCCGGGGTTAATGGTGCTCATGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGACGGCACGCAGCGAGACATCTGCCTCCAGCACCGGTTCATCCCCGCGAGCGCGGGGAACGGCGGTAGGTCTCGTCGTCGAGACCCAGATCCTTCGGTTCATCCCCGCGAGCGCGGGGAACGGCCACGTATAGGAAGCGCGAAAATCAGGGCGCGCGGTTCATCCCCGCGAGCGCGGGGAACGGATGTTCGTGGTTTAGTGGGTAGGCATATTCACCGGTTCATCCCCGCGAGCGCGGGGAACGGACCGTGGATCCGGTCGGACGCTGGCGATAGACCGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGCCCAGACCGTCCAGGAGGCTCCTGGCGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCTGAATCCCCGGATGATGGGGCGCGGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGCCGAACGGCTCTGGGCGTGCTCGGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCACCGGAATCGGGAAAACGTCGGGATCGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GATCAGAGTAATCATGCGAGTGACGCCAACCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGTCTTATATCTCTAATTCGCAGTCCATTATG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACTTTGATATCCTGTCTTTATCATTAAAGAAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGGCACGCAGCGAGACATCTGCCTCCAGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGAGGACTGCAAGTCCTGGCTGCGCTCGCCGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCAAGGTCCAGAGCACGAAAGAAATTAGGCGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAAATCCATTTCGGGCGAATCCAACGGGGCGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCGATTTTTTCGATTCACTGCCGACTGTTTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGCAGCGAGTTCCTCGACGAGATGGTGCGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AACAAGGCTGATGCGACCCGCGCGAAAGCGTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGAGCAACCGCAGCGCGTTCGGGAACTGCGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGTGGCGCTGCTGTGCTATGACGAGCTGACGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGTCATTCCTCCCGCCCGGCGCAGTCATAAAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGAGCAAGGCCGCAGTAGCCGCGACGGCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACCGAATCCCCGACGACCCCAGGATCCCAAGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGCTGTCATCGCATTTATGGGTCTCAAGCGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTACGGACGCAGCGACTCTTGGTGGCGCTGTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTGTATCTATCTGAGTAGGTGTTCCAATGAAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTGTCCTGATGTCGGCGACTCGGGACTCTGAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTAAAAGCATCCCGAGGGAGCGTATAAGGCCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCGTCAGCCGCTCCGCGATGGCTAGTCCAGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGCCGGGCGTGCGATCGATCTCGTCAAATAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTCCCCAAACCACCGCCAGAAGTTCCTCACCC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCCAACAATCCAGCCACCATCACTAGCGCTCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCCCAGGTTTGGCGTGTTTTTCCCTGGCTTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGGGCGGGCGTCTGTAGATTGGGCCGCGTCAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTTTACCGACAAGCCCCCGGACATGCGAATCAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGTGTTTTTCCCCGGCTCTCTTCGGCGTGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGAGTTCTGCCAATAATTGTGGTGGAACCTGT


>NC_013851|3|3|756777-762359|CRISPRCasFinder
CGGCTCGTCCCCGCGAGCGCGGGGAACGG	GATTCCTGGATGAGCCTTGTTTCGGTCCCAAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGGGCGTCGACGCGATCGCGCCATTCGGTGTC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCACCCAGCCGAGGATGTATCGAGAAAAATC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCCAAGCGCCCACGGTCGGCCACATCTGGAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGAACCAAGATCCTCCGTGACGCGGACCCCGA
AGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGCGCGGGACTCGGCTCCACATCGATGGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGGTGCTGGACTCGGGAATATTCAGCGCGGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGCAGAGCGGTCACTGATTCTGGAACAGAGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCAGCGCGGTCTTGAACGCCTCGAATGTGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTGTACACCACCTTTTCTAAGTAAAACAAGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TATTGTCAGACCCATCAGAAATAGACCATAGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTCGACAGCAAGCGCTTCCTCTTCCAGCAGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GACGGCAGGATAGTACGATGCGCGATTTCGTC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTGTGATGCGTCGTTTTTTATTCCTGATTTTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGGTCAGAGCCGCGCAGGGCCAAATACGCGCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGGCATCGGTGCCGTAGCCGGCCTCCAGCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GACATCACGCCGCCGATCTGCGTGCCGTCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGTCTGACGAATGGTTTGAGGCCCGCTGCGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCGCCAATTTGCACCGCGCAACGCCGGACGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCCCTTACGCGGCTTGGACGTATCCTCACAGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTATAGCGCGATGTGGCTCCAACGGCATCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGGACTGGGATTTGGGGATAAGGTCAAGAGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AAGAGCCAGAAATCAAGGCCTAAATGCCGGTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAACCTGCGTCTAATCCTGGAGAATGACCCCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGCCCTGGCCCGATTCCGGAGCCAGGCACCGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTCATGCGCCGTCGGCACAGACGAGAACGCTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGAGCGGTGCGCGGGTGCCGGTCTTGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAACTCTACGTTTGCAATTCGATTGCGCAATT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TATCTGTGAGGCCACTAGTCAACGACTAATCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAGGTATTCATTCATTTTTGAATCGATCTGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTTTCTCGCTCATTGGTCGCCTCGTGACGCAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTGTTCGCGGCCCTGCTCAAGAATGCGGGCCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCTACATCGCCATGAAGGGCGCTAACATCCTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGACATGGATTACAGCGCACGGCGCAGCCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCCGTCTGCTGGGCCTGGGCGGTCTCAGGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGAGCGGGAAATTGGGTCACGGTGTCGCCGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ATTCGCGATCGGGCGCAAGAGGAGGCTGAGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCCCCGGATCTGGCCATGCAGCCGTATGCCTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ATCACCTGCTCGGGTTCTGCGATTCCCCCACC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAGCCGCCCGCCGAAGGATTGATACAGGATAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCCTGTTCCTCGTGGCTGGCGATGGCTGTGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AACGCCCTACAGCTCGCGCGGCAGAACGAGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAGGCCCTGCCTGCGTATCACGGTGGGCAGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTGCCTTCGCCCGTCCAGCCGGTCCAGCCATG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCCGGGATCTTGACACCGCATTTGAGCAGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGATAAAGCGCTTGTTCGCGCTGTTCGATAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCACCCTGCGCTTCCTGATCCTGGAGTAAGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACAAACGAGGGCGCGGATACCGACCGCTGGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGGTCTTCAAACGTAGTGGAGCCAATAACA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCAGCCATGTCGGTCGTCAGATCCTGCAAATT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGGTCTTCAAACGTAGTGGAGCCAATAACA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTATTTGATGCGGTCGAATACCTATTCAATAA
AGGTTCATCCCCGCGAGCGCGGGGAACGG	ACCTCTGAGCCGGGGTTAATGGTGCTCATGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGGCACGCAGCGAGACATCTGCCTCCAGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGTAGGTCTCGTCGTCGAGACCCAGATCCTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCACGTATAGGAAGCGCGAAAATCAGGGCGCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ATGTTCGTGGTTTAGTGGGTAGGCATATTCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACCGTGGATCCGGTCGGACGCTGGCGATAGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGCCCAGACCGTCCAGGAGGCTCCTGGCGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCTGAATCCCCGGATGATGGGGCGCGGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGCCGAACGGCTCTGGGCGTGCTCGGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCACCGGAATCGGGAAAACGTCGGGATCGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GATCAGAGTAATCATGCGAGTGACGCCAACCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGTCTTATATCTCTAATTCGCAGTCCATTATG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACTTTGATATCCTGTCTTTATCATTAAAGAAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGGCACGCAGCGAGACATCTGCCTCCAGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGAGGACTGCAAGTCCTGGCTGCGCTCGCCGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCAAGGTCCAGAGCACGAAAGAAATTAGGCGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAAATCCATTTCGGGCGAATCCAACGGGGCGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCGATTTTTTCGATTCACTGCCGACTGTTTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGCAGCGAGTTCCTCGACGAGATGGTGCGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AACAAGGCTGATGCGACCCGCGCGAAAGCGTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGAGCAACCGCAGCGCGTTCGGGAACTGCGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGTGGCGCTGCTGTGCTATGACGAGCTGACGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGTCATTCCTCCCGCCCGGCGCAGTCATAAAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGAGCAAGGCCGCAGTAGCCGCGACGGCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACCGAATCCCCGACGACCCCAGGATCCCAAGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGCTGTCATCGCATTTATGGGTCTCAAGCGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTACGGACGCAGCGACTCTTGGTGGCGCTGTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTGTATCTATCTGAGTAGGTGTTCCAATGAAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTGTCCTGATGTCGGCGACTCGGGACTCTGAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTAAAAGCATCCCGAGGGAGCGTATAAGGCCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCGTCAGCCGCTCCGCGATGGCTAGTCCAGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGCCGGGCGTGCGATCGATCTCGTCAAATAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTCCCCAAACCACCGCCAGAAGTTCCTCACCC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCCAACAATCCAGCCACCATCACTAGCGCTCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCCCAGGTTTGGCGTGTTTTTCCCTGGCTTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGGGCGGGCGTCTGTAGATTGGGCCGCGTCAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTTTACCGACAAGCCCCCGGACATGCGAATCAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGTGTTTTTCCCCGGCTCTCTTCGGCGTGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGAGTTCTGCCAATAATTGTGGTGGAACCTGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG

>NC_013851|3|1|756777-762359|CRT
CGGCTCGTCCCCGCGAGCGCGGGGAACGG	GATTCCTGGATGAGCCTTGTTTCGGTCCCAAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGGGCGTCGACGCGATCGCGCCATTCGGTGTC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCACCCAGCCGAGGATGTATCGAGAAAAATC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCCAAGCGCCCACGGTCGGCCACATCTGGAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGAACCAAGATCCTCCGTGACGCGGACCCCGA
AGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGCGCGGGACTCGGCTCCACATCGATGGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGGTGCTGGACTCGGGAATATTCAGCGCGGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGCAGAGCGGTCACTGATTCTGGAACAGAGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCAGCGCGGTCTTGAACGCCTCGAATGTGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTGTACACCACCTTTTCTAAGTAAAACAAGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TATTGTCAGACCCATCAGAAATAGACCATAGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTCGACAGCAAGCGCTTCCTCTTCCAGCAGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GACGGCAGGATAGTACGATGCGCGATTTCGTC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTGTGATGCGTCGTTTTTTATTCCTGATTTTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGGTCAGAGCCGCGCAGGGCCAAATACGCGCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGGCATCGGTGCCGTAGCCGGCCTCCAGCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GACATCACGCCGCCGATCTGCGTGCCGTCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGTCTGACGAATGGTTTGAGGCCCGCTGCGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCGCCAATTTGCACCGCGCAACGCCGGACGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCCCTTACGCGGCTTGGACGTATCCTCACAGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTATAGCGCGATGTGGCTCCAACGGCATCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGGACTGGGATTTGGGGATAAGGTCAAGAGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AAGAGCCAGAAATCAAGGCCTAAATGCCGGTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAACCTGCGTCTAATCCTGGAGAATGACCCCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGCCCTGGCCCGATTCCGGAGCCAGGCACCGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTCATGCGCCGTCGGCACAGACGAGAACGCTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGAGCGGTGCGCGGGTGCCGGTCTTGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAACTCTACGTTTGCAATTCGATTGCGCAATT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TATCTGTGAGGCCACTAGTCAACGACTAATCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAGGTATTCATTCATTTTTGAATCGATCTGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTTTCTCGCTCATTGGTCGCCTCGTGACGCAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTGTTCGCGGCCCTGCTCAAGAATGCGGGCCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCTACATCGCCATGAAGGGCGCTAACATCCTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGACATGGATTACAGCGCACGGCGCAGCCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCCGTCTGCTGGGCCTGGGCGGTCTCAGGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGAGCGGGAAATTGGGTCACGGTGTCGCCGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ATTCGCGATCGGGCGCAAGAGGAGGCTGAGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCCCCGGATCTGGCCATGCAGCCGTATGCCTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ATCACCTGCTCGGGTTCTGCGATTCCCCCACC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAGCCGCCCGCCGAAGGATTGATACAGGATAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCCTGTTCCTCGTGGCTGGCGATGGCTGTGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AACGCCCTACAGCTCGCGCGGCAGAACGAGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAGGCCCTGCCTGCGTATCACGGTGGGCAGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTGCCTTCGCCCGTCCAGCCGGTCCAGCCATG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCCGGGATCTTGACACCGCATTTGAGCAGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGATAAAGCGCTTGTTCGCGCTGTTCGATAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCACCCTGCGCTTCCTGATCCTGGAGTAAGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACAAACGAGGGCGCGGATACCGACCGCTGGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGGTCTTCAAACGTAGTGGAGCCAATAACA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCAGCCATGTCGGTCGTCAGATCCTGCAAATT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGGTCTTCAAACGTAGTGGAGCCAATAACA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTATTTGATGCGGTCGAATACCTATTCAATAA
AGGTTCATCCCCGCGAGCGCGGGGAACGG	ACCTCTGAGCCGGGGTTAATGGTGCTCATGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGGCACGCAGCGAGACATCTGCCTCCAGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGTAGGTCTCGTCGTCGAGACCCAGATCCTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCACGTATAGGAAGCGCGAAAATCAGGGCGCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ATGTTCGTGGTTTAGTGGGTAGGCATATTCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACCGTGGATCCGGTCGGACGCTGGCGATAGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGCCCAGACCGTCCAGGAGGCTCCTGGCGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCTGAATCCCCGGATGATGGGGCGCGGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGCCGAACGGCTCTGGGCGTGCTCGGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCACCGGAATCGGGAAAACGTCGGGATCGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GATCAGAGTAATCATGCGAGTGACGCCAACCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGTCTTATATCTCTAATTCGCAGTCCATTATG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACTTTGATATCCTGTCTTTATCATTAAAGAAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGGCACGCAGCGAGACATCTGCCTCCAGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGAGGACTGCAAGTCCTGGCTGCGCTCGCCGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCAAGGTCCAGAGCACGAAAGAAATTAGGCGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAAATCCATTTCGGGCGAATCCAACGGGGCGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCGATTTTTTCGATTCACTGCCGACTGTTTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGCAGCGAGTTCCTCGACGAGATGGTGCGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AACAAGGCTGATGCGACCCGCGCGAAAGCGTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGAGCAACCGCAGCGCGTTCGGGAACTGCGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGTGGCGCTGCTGTGCTATGACGAGCTGACGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGTCATTCCTCCCGCCCGGCGCAGTCATAAAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGAGCAAGGCCGCAGTAGCCGCGACGGCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACCGAATCCCCGACGACCCCAGGATCCCAAGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGCTGTCATCGCATTTATGGGTCTCAAGCGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTACGGACGCAGCGACTCTTGGTGGCGCTGTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTGTATCTATCTGAGTAGGTGTTCCAATGAAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTGTCCTGATGTCGGCGACTCGGGACTCTGAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTAAAAGCATCCCGAGGGAGCGTATAAGGCCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCGTCAGCCGCTCCGCGATGGCTAGTCCAGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGCCGGGCGTGCGATCGATCTCGTCAAATAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTCCCCAAACCACCGCCAGAAGTTCCTCACCC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCCAACAATCCAGCCACCATCACTAGCGCTCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCCCAGGTTTGGCGTGTTTTTCCCTGGCTTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGGGCGGGCGTCTGTAGATTGGGCCGCGTCAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTTTACCGACAAGCCCCCGGACATGCGAATCAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGTGTTTTTCCCCGGCTCTCTTCGGCGTGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGAGTTCTGCCAATAATTGTGGTGGAACCTGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG

>NC_013851|3|2|759034-759185|PILER-CR
	GATTCCTGGATGAGCCTTGTTTCGGTCCCAAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGGGCGTCGACGCGATCGCGCCATTCGGTGTC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCACCCAGCCGAGGATGTATCGAGAAAAATC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCCAAGCGCCCACGGTCGGCCACATCTGGAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGAACCAAGATCCTCCGTGACGCGGACCCCGA
AGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGCGCGGGACTCGGCTCCACATCGATGGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGGTGCTGGACTCGGGAATATTCAGCGCGGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGCAGAGCGGTCACTGATTCTGGAACAGAGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCAGCGCGGTCTTGAACGCCTCGAATGTGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTGTACACCACCTTTTCTAAGTAAAACAAGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TATTGTCAGACCCATCAGAAATAGACCATAGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTCGACAGCAAGCGCTTCCTCTTCCAGCAGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GACGGCAGGATAGTACGATGCGCGATTTCGTC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTGTGATGCGTCGTTTTTTATTCCTGATTTTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGGTCAGAGCCGCGCAGGGCCAAATACGCGCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGGCATCGGTGCCGTAGCCGGCCTCCAGCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GACATCACGCCGCCGATCTGCGTGCCGTCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGTCTGACGAATGGTTTGAGGCCCGCTGCGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCGCCAATTTGCACCGCGCAACGCCGGACGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCCCTTACGCGGCTTGGACGTATCCTCACAGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTATAGCGCGATGTGGCTCCAACGGCATCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGGACTGGGATTTGGGGATAAGGTCAAGAGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AAGAGCCAGAAATCAAGGCCTAAATGCCGGTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAACCTGCGTCTAATCCTGGAGAATGACCCCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGCCCTGGCCCGATTCCGGAGCCAGGCACCGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTCATGCGCCGTCGGCACAGACGAGAACGCTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGAGCGGTGCGCGGGTGCCGGTCTTGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAACTCTACGTTTGCAATTCGATTGCGCAATT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TATCTGTGAGGCCACTAGTCAACGACTAATCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAGGTATTCATTCATTTTTGAATCGATCTGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTTTCTCGCTCATTGGTCGCCTCGTGACGCAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTGTTCGCGGCCCTGCTCAAGAATGCGGGCCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCTACATCGCCATGAAGGGCGCTAACATCCTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGACATGGATTACAGCGCACGGCGCAGCCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCCGTCTGCTGGGCCTGGGCGGTCTCAGGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGGTGAGCGGGAAATTGGGTCACGGTGTCGCCGGACGGTTCATCCCCGCGAGCGCGGGGAACGGATTCGCGATCGGGCGCAAGAGGAGGCTGAGACCGGTTCATCCCCGCGAGCGCGGGGAACGG	GCCCCGGATCTGGCCATGCAGCCGTATGCCT
ACGGTTCATCCCCGCGAGCGCGGGGAACGG	ATCACCTGCTCGGGTTCTGCGATTCCCCCAC
CCGGTTCATCCCCGCGAGCGCGGGGAACGGCAGCCGCCCGCCGAAGGATTGATACAGGATAACGGTTCATCCCCGCGAGCGCGGGGAACGGTCCTGTTCCTCGTGGCTGGCGATGGCTGTGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGAACGCCCTACAGCTCGCGCGGCAGAACGAGATCGGTTCATCCCCGCGAGCGCGGGGAACGGGAGGCCCTGCCTGCGTATCACGGTGGGCAGGGCGGTTCATCCCCGCGAGCGCGGGGAACGGGTGCCTTCGCCCGTCCAGCCGGTCCAGCCATGCGGTTCATCCCCGCGAGCGCGGGGAACGGAGCCGGGATCTTGACACCGCATTTGAGCAGATCGGTTCATCCCCGCGAGCGCGGGGAACGGGCGATAAAGCGCTTGTTCGCGCTGTTCGATACCGGTTCATCCCCGCGAGCGCGGGGAACGGTCACCCTGCGCTTCCTGATCCTGGAGTAAGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGACAAACGAGGGCGCGGATACCGACCGCTGGATCGGTTCATCCCCGCGAGCGCGGGGAACGGCCGGGTCTTCAAACGTAGTGGAGCCAATAACACGGTTCATCCCCGCGAGCGCGGGGAACGGTCAGCCATGTCGGTCGTCAGATCCTGCAAATTCGGTTCATCCCCGCGAGCGCGGGGAACGGCCGGGTCTTCAAACGTAGTGGAGCCAATAACACGGTTCATCCCCGCGAGCGCGGGGAACGGGTATTTGATGCGGTCGAATACCTATTCAATAAAGGTTCATCCCCGCGAGCGCGGGGAACGGACCTCTGAGCCGGGGTTAATGGTGCTCATGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGACGGCACGCAGCGAGACATCTGCCTCCAGCACCGGTTCATCCCCGCGAGCGCGGGGAACGGCGGTAGGTCTCGTCGTCGAGACCCAGATCCTTCGGTTCATCCCCGCGAGCGCGGGGAACGGCCACGTATAGGAAGCGCGAAAATCAGGGCGCGCGGTTCATCCCCGCGAGCGCGGGGAACGGATGTTCGTGGTTTAGTGGGTAGGCATATTCACCGGTTCATCCCCGCGAGCGCGGGGAACGGACCGTGGATCCGGTCGGACGCTGGCGATAGACCGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGCCCAGACCGTCCAGGAGGCTCCTGGCGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCTGAATCCCCGGATGATGGGGCGCGGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGCCGAACGGCTCTGGGCGTGCTCGGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCACCGGAATCGGGAAAACGTCGGGATCGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GATCAGAGTAATCATGCGAGTGACGCCAACCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGTCTTATATCTCTAATTCGCAGTCCATTATG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACTTTGATATCCTGTCTTTATCATTAAAGAAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGGCACGCAGCGAGACATCTGCCTCCAGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGAGGACTGCAAGTCCTGGCTGCGCTCGCCGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCAAGGTCCAGAGCACGAAAGAAATTAGGCGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAAATCCATTTCGGGCGAATCCAACGGGGCGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCGATTTTTTCGATTCACTGCCGACTGTTTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGCAGCGAGTTCCTCGACGAGATGGTGCGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AACAAGGCTGATGCGACCCGCGCGAAAGCGTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGAGCAACCGCAGCGCGTTCGGGAACTGCGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGTGGCGCTGCTGTGCTATGACGAGCTGACGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGTCATTCCTCCCGCCCGGCGCAGTCATAAAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGAGCAAGGCCGCAGTAGCCGCGACGGCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACCGAATCCCCGACGACCCCAGGATCCCAAGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGCTGTCATCGCATTTATGGGTCTCAAGCGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTACGGACGCAGCGACTCTTGGTGGCGCTGTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTGTATCTATCTGAGTAGGTGTTCCAATGAAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTGTCCTGATGTCGGCGACTCGGGACTCTGAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTAAAAGCATCCCGAGGGAGCGTATAAGGCCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCGTCAGCCGCTCCGCGATGGCTAGTCCAGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGCCGGGCGTGCGATCGATCTCGTCAAATAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTCCCCAAACCACCGCCAGAAGTTCCTCACCC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCCAACAATCCAGCCACCATCACTAGCGCTCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCCCAGGTTTGGCGTGTTTTTCCCTGGCTTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGGGCGGGCGTCTGTAGATTGGGCCGCGTCAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTTTACCGACAAGCCCCCGGACATGCGAATCAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGTGTTTTTCCCCGGCTCTCTTCGGCGTGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGAGTTCTGCCAATAATTGTGGTGGAACCTGT


>NC_013851|3|3|760316-762359|PILER-CR
	GATTCCTGGATGAGCCTTGTTTCGGTCCCAAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGGGCGTCGACGCGATCGCGCCATTCGGTGTC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCACCCAGCCGAGGATGTATCGAGAAAAATC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCCAAGCGCCCACGGTCGGCCACATCTGGAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGAACCAAGATCCTCCGTGACGCGGACCCCGA
AGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGCGCGGGACTCGGCTCCACATCGATGGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGGTGCTGGACTCGGGAATATTCAGCGCGGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGCAGAGCGGTCACTGATTCTGGAACAGAGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCAGCGCGGTCTTGAACGCCTCGAATGTGAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTGTACACCACCTTTTCTAAGTAAAACAAGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TATTGTCAGACCCATCAGAAATAGACCATAGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTCGACAGCAAGCGCTTCCTCTTCCAGCAGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GACGGCAGGATAGTACGATGCGCGATTTCGTC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTGTGATGCGTCGTTTTTTATTCCTGATTTTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGGTCAGAGCCGCGCAGGGCCAAATACGCGCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGGCATCGGTGCCGTAGCCGGCCTCCAGCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GACATCACGCCGCCGATCTGCGTGCCGTCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGTCTGACGAATGGTTTGAGGCCCGCTGCGGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGCGCCAATTTGCACCGCGCAACGCCGGACGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCCCTTACGCGGCTTGGACGTATCCTCACAGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTATAGCGCGATGTGGCTCCAACGGCATCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGGACTGGGATTTGGGGATAAGGTCAAGAGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AAGAGCCAGAAATCAAGGCCTAAATGCCGGTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAACCTGCGTCTAATCCTGGAGAATGACCCCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGCCCTGGCCCGATTCCGGAGCCAGGCACCGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTCATGCGCCGTCGGCACAGACGAGAACGCTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGAGCGGTGCGCGGGTGCCGGTCTTGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CAACTCTACGTTTGCAATTCGATTGCGCAATT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TATCTGTGAGGCCACTAGTCAACGACTAATCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAGGTATTCATTCATTTTTGAATCGATCTGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTTTCTCGCTCATTGGTCGCCTCGTGACGCAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTGTTCGCGGCCCTGCTCAAGAATGCGGGCCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCTACATCGCCATGAAGGGCGCTAACATCCTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGGACATGGATTACAGCGCACGGCGCAGCCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCCGTCTGCTGGGCCTGGGCGGTCTCAGGGG
CGGTTCATCCCCGCGAGCGCGGGGAACGGTGAGCGGGAAATTGGGTCACGGTGTCGCCGGACGGTTCATCCCCGCGAGCGCGGGGAACGGATTCGCGATCGGGCGCAAGAGGAGGCTGAGACCGGTTCATCCCCGCGAGCGCGGGGAACGG	GCCCCGGATCTGGCCATGCAGCCGTATGCCT
ACGGTTCATCCCCGCGAGCGCGGGGAACGG	ATCACCTGCTCGGGTTCTGCGATTCCCCCAC
CCGGTTCATCCCCGCGAGCGCGGGGAACGGCAGCCGCCCGCCGAAGGATTGATACAGGATAACGGTTCATCCCCGCGAGCGCGGGGAACGGTCCTGTTCCTCGTGGCTGGCGATGGCTGTGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGAACGCCCTACAGCTCGCGCGGCAGAACGAGATCGGTTCATCCCCGCGAGCGCGGGGAACGGGAGGCCCTGCCTGCGTATCACGGTGGGCAGGGCGGTTCATCCCCGCGAGCGCGGGGAACGGGTGCCTTCGCCCGTCCAGCCGGTCCAGCCATGCGGTTCATCCCCGCGAGCGCGGGGAACGGAGCCGGGATCTTGACACCGCATTTGAGCAGATCGGTTCATCCCCGCGAGCGCGGGGAACGGGCGATAAAGCGCTTGTTCGCGCTGTTCGATACCGGTTCATCCCCGCGAGCGCGGGGAACGGTCACCCTGCGCTTCCTGATCCTGGAGTAAGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGACAAACGAGGGCGCGGATACCGACCGCTGGATCGGTTCATCCCCGCGAGCGCGGGGAACGGCCGGGTCTTCAAACGTAGTGGAGCCAATAACACGGTTCATCCCCGCGAGCGCGGGGAACGGTCAGCCATGTCGGTCGTCAGATCCTGCAAATTCGGTTCATCCCCGCGAGCGCGGGGAACGGCCGGGTCTTCAAACGTAGTGGAGCCAATAACACGGTTCATCCCCGCGAGCGCGGGGAACGGGTATTTGATGCGGTCGAATACCTATTCAATAAAGGTTCATCCCCGCGAGCGCGGGGAACGGACCTCTGAGCCGGGGTTAATGGTGCTCATGGCCGGTTCATCCCCGCGAGCGCGGGGAACGGACGGCACGCAGCGAGACATCTGCCTCCAGCACCGGTTCATCCCCGCGAGCGCGGGGAACGGCGGTAGGTCTCGTCGTCGAGACCCAGATCCTTCGGTTCATCCCCGCGAGCGCGGGGAACGGCCACGTATAGGAAGCGCGAAAATCAGGGCGCGCGGTTCATCCCCGCGAGCGCGGGGAACGGATGTTCGTGGTTTAGTGGGTAGGCATATTCACCGGTTCATCCCCGCGAGCGCGGGGAACGGACCGTGGATCCGGTCGGACGCTGGCGATAGACCGGTTCATCCCCGCGAGCGCGGGGAACGG	CCGCCCAGACCGTCCAGGAGGCTCCTGGCGGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCTGAATCCCCGGATGATGGGGCGCGGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGCCGAACGGCTCTGGGCGTGCTCGGGTCGC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCACCGGAATCGGGAAAACGTCGGGATCGAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GATCAGAGTAATCATGCGAGTGACGCCAACCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGTCTTATATCTCTAATTCGCAGTCCATTATG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACTTTGATATCCTGTCTTTATCATTAAAGAAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACGGCACGCAGCGAGACATCTGCCTCCAGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGAGGACTGCAAGTCCTGGCTGCGCTCGCCGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCAAGGTCCAGAGCACGAAAGAAATTAGGCGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GAAATCCATTTCGGGCGAATCCAACGGGGCGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCGATTTTTTCGATTCACTGCCGACTGTTTA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGCAGCGAGTTCCTCGACGAGATGGTGCGCAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AACAAGGCTGATGCGACCCGCGCGAAAGCGTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TCGAGCAACCGCAGCGCGTTCGGGAACTGCGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGTGGCGCTGCTGTGCTATGACGAGCTGACGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TGTCATTCCTCCCGCCCGGCGCAGTCATAAAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGAGCAAGGCCGCAGTAGCCGCGACGGCGAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	ACCGAATCCCCGACGACCCCAGGATCCCAAGA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CGGCTGTCATCGCATTTATGGGTCTCAAGCGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTACGGACGCAGCGACTCTTGGTGGCGCTGTG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTGTATCTATCTGAGTAGGTGTTCCAATGAAC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTGTCCTGATGTCGGCGACTCGGGACTCTGAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTAAAAGCATCCCGAGGGAGCGTATAAGGCCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	AGCGTCAGCCGCTCCGCGATGGCTAGTCCAGG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGCCGGGCGTGCGATCGATCTCGTCAAATAT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	CTCCCCAAACCACCGCCAGAAGTTCCTCACCC
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCCAACAATCCAGCCACCATCACTAGCGCTCG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	TTCCCAGGTTTGGCGTGTTTTTCCCTGGCTTT
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGGGCGGGCGTCTGTAGATTGGGCCGCGTCAG
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GTTTACCGACAAGCCCCCGGACATGCGAATCAA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GCGTGTTTTTCCCCGGCTCTCTTCGGCGTGCA
CGGTTCATCCCCGCGAGCGCGGGGAACGG	GGAGTTCTGCCAATAATTGTGGTGGAACCTGT
CGGTTCATCCCCGCGAGCGCGGGGAACGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013851.1\|WP_012969874.1\|764002_764632_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|378050
NC_013851.1\|WP_012969870.1\|755954_756671_-\|TonB-dependent-receptor-plug-domain-containing-protein	unknown	unknown	gnl\|CDD\|238657
NC_013851.1\|WP_012969873.1\|763707_763920_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|374224
NC_013851.1\|WP_012969880.1\|768538_768688_-\|hypothetical-protein	unknown	unknown	unknown
NC_013851.1\|WP_012969875.1\|764628_765312_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NC_013851.1\|WP_043795500.1\|751448_752465_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NC_013851.1\|WP_012969864.1\|747429_747879_-\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NC_013851.1\|WP_012969872.1\|762732_763650_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_013851.1\|WP_012969876.1\|765323_766505_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NC_013851.1\|WP_012969869.1\|754373_755723_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379519
NC_013851.1\|WP_012969882.1\|771804_772653_+\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NC_013851.1\|WP_012969866.1\|750587_751214_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|226932
NC_013851.1\|WP_043795499.1\|751237_751477_-\|TonB-dependent-receptor	unknown	unknown	unknown
NC_013851.1\|WP_012969868.1\|754087_754309_-\|hypothetical-protein	unknown	unknown	unknown
NC_013851.1\|WP_012969867.1\|752617_754054_+\|transposase	unknown	unknown	gnl\|CDD\|379252
NC_013851.1\|WP_012969881.1\|768864_771498_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NC_013851.1\|WP_012969877.1\|766505_766964_-\|hypothetical-protein	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NC_013851.1\|WP_012969863.1\|746327_747392_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|275201
NC_013851.1\|WP_012969865.1\|748041_750585_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|226654
NC_013851.1\|WP_012969871.1\|762461_762752_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930

Protein	Function_ID	Function_description	E-value
NC_013851.1\|WP_012969870.1\|755954_756671_-\|TonB-dependent-receptor-plug-domain-containing-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	3.97183e-22
NC_013851.1\|WP_012969873.1\|763707_763920_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	4.09499e-18
NC_013851.1\|WP_012969875.1\|764628_765312_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	1.12612e-48
NC_013851.1\|WP_043795500.1\|751448_752465_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	3.77249e-28
NC_013851.1\|WP_012969874.1\|764002_764632_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.25882e-48
NC_013851.1\|WP_012969872.1\|762732_763650_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.64154e-148
NC_013851.1\|WP_012969876.1\|765323_766505_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.47594e-124
NC_013851.1\|WP_012969869.1\|754373_755723_-\|HNH-endonuclease	gnl\|CDD\|379519	pfam14239, RRXRR, RRXRR protein. This domain is found in bacteria, eukaryotes and viruses, and is approximately 180 amino acids in length. It contains a conserved RRXRR motif. It is often found in association with pfam01844.	3.43812e-90
NC_013851.1\|WP_012969882.1\|771804_772653_+\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	7.0709e-119
NC_013851.1\|WP_012969866.1\|750587_751214_+\|response-regulator-transcription-factor	gnl\|CDD\|226932	COG4566, TtrR, Response regulator [Signal transduction mechanisms].	2.55549e-88
NC_013851.1\|WP_012969864.1\|747429_747879_-\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	2.42421e-20
NC_013851.1\|WP_012969867.1\|752617_754054_+\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.50623e-25
NC_013851.1\|WP_012969881.1\|768864_771498_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
NC_013851.1\|WP_012969877.1\|766505_766964_-\|hypothetical-protein	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.11721e-10
NC_013851.1\|WP_012969863.1\|746327_747392_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|275201	TIGR04408, LptG_lptG, LPS export ABC transporter permease LptG. Members of this family are LptG, one of homologous, two tandem-encoded permease genes of an export ATP transporter for lipopolysaccharide (LPS) assembly in most Gram-negative bacteria. The other permease subunit is LptF (TIGR04407). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	1.08214e-116
NC_013851.1\|WP_012969865.1\|748041_750585_+\|PAS-domain-S-box-protein	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	3.67157e-47
NC_013851.1\|WP_012969871.1\|762461_762752_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	4.39046e-58

>NC_013851.1|WP_012969870.1|755954_756671_-|TonB-dependent-receptor-plug-domain-containing-protein
MVSIPFSIDTFVGRWRRSLAVSALCAGVATGANLRAADATLTPQEDDQSDRQQAELLAILDEATELATKNRINVDYVPGIMTVLDRAEMLALGVRTVADALTLIPGVLVERNGTGEMTLSIRGQGNSTGTVKVLIDSVSMNTSDGAVLIFDEMPVEQVERIEVIRGPGSALYGEFAFSGVVNIVTLQQARRVHVRYGDANTTQVGGVYSLEDPERSLSMTVNYPRLKAGACEATHEPG
>NC_013851.1|WP_012969869.1|754373_755723_-|HNH-endonuclease
MAVFVLDKQKHPLMPCTEKRARLLLERGRAVVVRLAPFTIRLKDRIGGALQPLRLKLDPGSRVTGLALVRESETCDADTGAVERLEHGLWFGELAHRGQAIRETLGQRRHLRRARRSRKTRYRAARFLNRTRRTGWLPPSVQHRVESTVNWVKRLRRLAPITALSQELVRFDTQALQNPEISGVEYQQGELAGYEVREYLLEKWHRTCAYCSATGVPLEIEHIVPRSRGGSDRVSNLTLACRACNQRKGNQSIEDFLKRQPALLRQIQAQAQAPLQDAAAVNATRWALFAALKAQGLPVETGSGGRTKFNRSRLNLPKTHALDASCVGAVDQVRDWNRPVLAIRATGRGTYSRTRLDRFGFPRGYLIREKRVHGFQTGDWVRAEVPAGKRAGVHVGRVAVRRTGAFNIQTQDATVQGISYRHCRVLQRADGYGYAFQSKPDAEKARRAA
>NC_013851.1|WP_012969868.1|754087_754309_-|hypothetical-protein
MNLAGWDSHGLGIEAGPDSLYPLGLGAFSNAPGTVDDGQSYRFGQLRFNAGDFSLLAQYHWILDKNTLLPDAQ
>NC_013851.1|WP_012969867.1|752617_754054_+|transposase
MTTSMLKDSLESLQHFRQRLYEHLGARRDASLNLLDSLCANTQARSVVELSLNPAFERDYTSLYAAIEAFTPEPTARDPSPSTGLSALVSEQIPAPSPARPFWLLGVDTTPNPRPFAATLADRGVVYQPNPAPGNKPIAVGHHYSVVAALPERSRCHPPWVVPLQARRVASNTTATAVAASQMAAVLADPAQPYATALSVQVADSHYSHAAYLHALSAFSNHVVIARSAGNRVYSRAPPATDGACGHPIWYGEAFRLADPETWGSPCQSAEWPDQTASGRAIRLTLERWDDLLMRGHRDSPMQDHPFDVVRCRVFDAQTGRALFKRPLWLIVMGQRRAELSLQQIEQAYRQRFDLEHFFRFGKHPLLLDRFQTPDLTHEEHWWPLVCLAYVQLWLAAPLASDLPRPWERFLPKPLADTRLSPARVQRDFARLIRQIGTPARATKRRGISPGRVTGTPGQRRARLPIVFKRQPRLTATA
>NC_013851.1|WP_043795500.1|751448_752465_-|TonB-dependent-receptor
MQWGDEGIAQTKSVIQAGYAFSLSDQSRAELKVHWHEGWLDSDQRLAPAGLPALGIGAIMPEDSRQKLHTHSNRIQLDAALDWEGWTDHRMRFEVSVAEDKMLDAWWAFNIDLLTLEPLPFMRRYSGELGFIDPEASRTIRSVVFQDQWSARPDLDLTLGVRYDAYSDVGDNVSPRLAAVWRVTDQHVLKAQVASAFFPPSLLQRHIQSFLPVIETARDPETTRTAELAYIFRRADTVGRASAYYSRLYDLITASGSSWVNLGEARTQGVELEWLQAFGRRFKLQANLSYADTLNYETGGPIPGAANWLGNLSLFYYLAPDVLLAGRWNHVGDRARER
>NC_013851.1|WP_043795499.1|751237_751477_-|TonB-dependent-receptor
MSGTARASDDSRSDLAGYDTVTLTLSWFNVGAQGLDLRLGLTNLLGETVRSPAPALTYDEDYPLVDERTLWVQLSYALP
>NC_013851.1|WP_012969866.1|750587_751214_+|response-regulator-transcription-factor
MTAEANAIVFIVDDDQAMRTSLQWLIESTGMSVKTYDSADAFLADYYPGRAGCLLLDVRMPGMSGLELQAYLAREGFRIPVILITGHGDVAMAVRAMKAGAMDFIEKPFHDEDLLRSLRNALDHDQKTRANRLARADIAMRLAELTPREHEVMAMVTDGKSNKEIAAALGVSAKTVEAHRARVMEKMRAESLAELVRMALIAAPEALV
>NC_013851.1|WP_012969865.1|748041_750585_+|PAS-domain-S-box-protein
MPWIAIVVGLATGIAIWTVLDQIQTRQVDKIFDQELQIQLDLRARESLIRFDRYLSSYGATTRLLANYRKLSEYLEPLFWSDDEAIDPVIYKDFRPQWLPDFFERDALAPPSHVLLTDPHGRVREIFQAGSDPVPAEMAIQVPTQLLDRHDIRTVIDRLGERLYLITSDAAEDAGGYHMGYLLVLVPVDATFLAASQRGVDVGRASVALVDSDEQRILASLDPSLIPIDSFLSDWSATHVITSQSLPEYEGSDSNLLFATFVPQSRVERMSRHVRIFERRQRFYAAAVFVIVFTGLIYLVSSRLNKVLKRMTRFSQRALGIPEPGFQRGGNQLVLLEDWIQHFTQLVLKAREEMSRRHQAAMRESEALKAAMMEASLDAIVTLDHSGRVIEYNPAAERLFGVGRPFALGAVFVERFLPDVARPAFKRLLDRSRHRHREPLGRGELIALHADGAEIPVEISIAPIERVGERFFTLYIHDISSRKQAEQEIKSLARFASESPHPILRVNAAGLIVYANNASRPLLRAWNADPGEPLPEDWGTAVAAALETAQPLERELEAGGQVYSLLLAPIRDLGYVNLYARDITAVRRAEQESRQHQAELVHVCRLSTMGEVATGMAHELNQPLSAIVNYANGCVRRLQGGQGQPEELVGAMNQITAQAKRASEIIKRLRALVGKQPPARAEADLNHLVREVCSFLEFETSRVGVAIELELSAEAIPVCVDLVQVEQVLLNLVGNALDALEERPESERRLRICTELEDDWAQVAVADSGPGIEPEHLKRLFDPFVTTKEGGMGMGLAISQTIVENHEGRIWAESVLGHGSTFHLRLPLALPVQEGAGTRANVLEPID
>NC_013851.1|WP_012969864.1|747429_747879_-|RDD-family-protein
MSFDLSKAQKPSIFRRIGAFLYDVLLLIAVLMVAVGLVVVPYGVITGEELHKHYLLLEQLYLLLVTGAFYVYFWTHGGQTLGMKAWRLQVVAQDGEAVGVNAAVKRFVWSILSLIPAGLGLWWSLFNRQGLAWHDSRSNTRVVLLPKSA
>NC_013851.1|WP_012969863.1|746327_747392_+|LPS-export-ABC-transporter-permease-LptG
MRILDRYLAWAVMSGTLLTLAGLLPLMGVFILSDELDAIGTERYGLAEAMLFTLLSLPRYLYQLFPIATLIGALIGLGTLASRSELVAMRAAGISVGRLVRAALLGGLVLATIAVVLGELVAPIAEQRAVELRRLALSGEAAQLTPYGFWAIDDGAYVNIREIRSGTSLRDIDIYRVDAAAGTLEASHAEGARYEDGRWVLEGIALSRVDGEGVQVERVEHAEWDSMLDPGLLKVVVADPRALPVWGLYKYIRFMSVNKQDASAYEIAFWSKVLHPVLTLSMILIAIPMLLGSSRSTGMGRRMLAGILVGLVYYLVSRTFAYLALLFGMNAFLAAIAPPVLFIGAAMLLLRRVG
>NC_013851.1|WP_012969871.1|762461_762752_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MLVIVTENVPPRLRGRLAVWLLEIRAGVYIGNPSKRLREFIWNQVLEGVEDGNAVMAWNTNTESGYDFLTVGKNRRVPVDFDGLRLVSFKPLDEPN
>NC_013851.1|WP_012969872.1|762732_763650_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MLPPLKPIAMKERISLIFIEYGEIDVLDGAFVVIDKTGVRTHIPIGSIACIMLEPGTRVSHRAAALAARVGTLLVWVGEAGVRLYASGQPGGARSDRLLYQAKLALDDQARLKVVRKMYELRFGEKPPERRSVEQLRGIEGARVKKTYENLAKRYGVQWRGRRYDPSEWDTSDVPNTCLSAATACLYGITEAAILAAGYAPAVGFIHTGKPQSFVYDIADIVKFETVVPVAFQIAAKNPPQSHAERLVRLACRDVFRESKLLGKIIPMIEDVLSAGEIEPPKPAPEAVAPAIDDGKPLGDAGHRH
>NC_013851.1|WP_012969873.1|763707_763920_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MRYAIVIERAEHNYSAYVPDLPGCIATGRTLEETEREIREAIAFHLEGLREDGLPVPTPTSQVDYIEIAA
>NC_013851.1|WP_012969874.1|764002_764632_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MILSRAEIPWSEARNPYDMHRAIWRLFPGEAAESRRTPDQPRRGFLFRVEDHRPGRPAQVLIQSRCMPQPEATLNLIGSREINPQPSQGQRLAFILTANPIKTIKDRQADTKPRKTRDTCRVPLITEETQKSWLIQRLKDVAEVEAVAVTPHPPLYFRKANRGGKILCATFEGLLTVLDPNALVALLENGLGPAKAFGCGLLLVRRATS
>NC_013851.1|WP_012969875.1|764628_765312_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MPSYLILRLDGPMQAWGTHTFEDYRPSNPFPTRSGLLGLLGACLGLDRSDTPSLDALAESVAFTVRLDTGAPRPGVDRLMPKRHTKLSDYHTVLDARKVDGSTNKFPIQSHREYLFDAAFAVAIGSRPDASFSLARIAESLRQPRFTPVLGRRSCPLGRPLLERPDCIEADDAKAALAQFPPHGGLIYSEDELVSDQPTWIRDVPRYGRHRQFATRRLYLHREEESS
>NC_013851.1|WP_012969876.1|765323_766505_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MNTRNFVNFHVLISHSPSCLNRDDMNMQKTAIFGGKTRVRISSQSLKRAIRYSDYYARYFISKSQRTRRLFDKMADELSASAESAEQTTAIEKCALYAAAIFEGKTKIDEIGKYERDKKSDHIETQIIPFSCAEIEGIKQILLEAAGKPEKGRIEYMKAEIQRLEREQRTRIDLDVALSGRMANSELIYPVDGALAVAHAITTHTVEPQDIDWFTAVDDLTLDAGETGAGHLNTQQFSAGVFYRYASLNLRQLQFNLGLLANINAEQTTESRARALDIARHVLHLLATVVPSAKQQSFAAHNLADFVIVSLADQPVSLANAFEEPIERERKIGGFLQPSITALADYWSRVNSAYGLDEQARAFALRGGIKLGDQEVLTSIADLEQWLANDGRA
>NC_013851.1|WP_012969877.1|766505_766964_-|hypothetical-protein
MSTEAPDFAEYHARFERLPNGAKAGLRRAAEPDDLRDLPGLYHLFPGSRPSNQETLLAFFLPWCPELNSNTGFMTLCANSISEERIMQIARANPPDDLIALRRLVMQLHPAVGWLDLAPLLWYWGSKKTGSSKRRLVEGYYIALHKIDQGDK
>NC_013851.1|WP_012969880.1|768538_768688_-|hypothetical-protein
MFETIKALKDLVVELGKLGPDGIVALKLIAMLMLLIFLFFIATLFLLRL
>NC_013851.1|WP_012969881.1|768864_771498_-|CRISPR-associated-helicase/endonuclease-Cas3
MLSKDYWRYWAKADTGVEGANKWHPFAYHSLDAAVIAATFWRDSSAVRRTLMAAFDVEEAEIQRLLAWILFFVALHDIGKLHALFQIKAPHILPQIWPDLASTKLIDTSGGHYDHGREGYRLSMAELRGWFKPASRHALKAWSSWLAAVTGHHGEIPDNDDPLPAYAEATILEQDANARRAWIQEAADLFLHPAGLSLEDPPPPCVTEARNLLAGFCSLCDWIGSNVDVFAYAPPALSPNDYLHSRLEQIRRDDILRHFGLIATPLAYQGIPALLKTDEHPRGTQVMIDDLPLVPGLTIVEAPTGSGKTEAALAYAWRLIDAGLAESIVFALPTQATANAMLGRCETFSKSAFGRANLVLAHGHSRLNQAYQRLIEAGSKRTAQGETEAGVQCAAWLASSRKRVFLGQIGVCTVDQVLLSVLPVRHNFVRAFGLHRSVLIVDEVHAYDAYMNGLLIEVLKRQKAVGGSAILLSATLPASIRGKLLESWGHEPVADVANYPAIWNTAALSESDSPLSLPDTERPAQRTIEVSLSKLGGACPDEPLIQRIIDAAESGALVGIVMNTVDDAQQLWIQLHKNAQVPVDLFHARFRLQDRQRIEQRVIEHYGRDAERTQGRILVATQVIEQSLDLDFDWLITQLCPVDLLFQRLGRLHRHSRKRPDDFQVPTCTVLSVETDDYGLHELIYGDARLLWRTEFLLARHKQIHFPAAYREWIEPVYGEAPWDDEPGTVYGKHLAWRDDQSEAEKKAHRLTTMNLSKFRDDEERLTSLTRDGEMSLSVLLTREDGRLLDGEDPDQMDEYTQAETLMLNTVPAPHSWGDRQLAGHVRDEDGRIRLKMHDDGQQRWSSLDGGVCYTTELGLAKAETAGLMDPPTEAPR
>NC_013851.1|WP_012969882.1|771804_772653_+|glutamate-racemase
MNPHHPIGVFDSGLGGLTVLREIRRLLPGEDLLYVADSAHAPYGDKSMAFIESRSIAITEFLLERGAKAIVVACNTATGAAAKLLRTQYNVPLIAMEPAVKPAVERTRSGVVAVLATRRTLASHNFSVLLGRLETDAEILLQPCPGLVERVEAGDLAGEGTRELLRGYLEPLLARGADTLVLGCTHYPLLTPLIQELAGPDVLILDSGIGVARQVRRRLSEAELLAPEERTGRERFWTSAPPARMHALMARLWAGEVELARWVESEAEDDRRSPGDLALEPT

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Crispr_ID: NC_013851_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013851_4

1097747-1097850

Orphan

Consensus_repeat	Method
GAAGCTCTGGAACTCGAAGCCCAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013851_4

>merge|NC_013851|4|1097747-1097850|CRISPRCasFinder
GAAGCTCTGGAACTCGAAGCCCAGCGTCAGGCTGAACTGGAGGCCCAACGTCTCGCCGCTGAGGAAGCGGCCCGGCGTGAAGCTCTGGAGCTCGAAGCCCAGCG

>NC_013851|4|4|1097747-1097850|CRISPRCasFinder
GAAGCTCTGGAACTCGAAGCCCAGCG	TCAGGCTGAACTGGAGGCCCAACGTCTCGCCGCTGAGGAAGCGGCCCGGCGT
GAAGCTCTGGAGCTCGAAGCCCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013851.1\|WP_012970181.1\|1106581_1107157_-\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NC_013851.1\|WP_012970178.1\|1102797_1105233_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NC_013851.1\|WP_012970168.1\|1094035_1094527_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
NC_013851.1\|WP_012970180.1\|1105632_1106520_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377281
NC_013851.1\|WP_012970177.1\|1101492_1102749_+\|DUF3391-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NC_013851.1\|WP_012970164.1\|1087132_1088287_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|169982
NC_013851.1\|WP_012970179.1\|1105253_1105574_-\|BolA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376601
NC_013851.1\|WP_012970163.1\|1086237_1086972_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_013851.1\|WP_012970174.1\|1098658_1099969_+\|Tol-Pal-system-beta-propeller-repeat-protein-TolB	unknown	unknown	gnl\|CDD\|179892
NC_013851.1\|WP_012970175.1\|1100040_1100574_+\|peptidoglycan-associated-lipoprotein-Pal	unknown	unknown	gnl\|CDD\|274307
NC_013851.1\|WP_190275529.1\|1094588_1095605_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NC_013851.1\|WP_012970165.1\|1088303_1091423_+\|multidrug-efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NC_013851.1\|WP_012970182.1\|1107220_1108045_-\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NC_013851.1\|WP_043795973.1\|1092260_1094018_+\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|180578
NC_013851.1\|WP_012970183.1\|1108191_1110444_+\|transketolase	unknown	unknown	gnl\|CDD\|226466
NC_013851.1\|WP_012970170.1\|1095687_1096110_+\|tol-pal-system-associated-acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|274304
NC_013851.1\|WP_043795529.1\|1091517_1092024_+\|hypothetical-protein	unknown	unknown	unknown
NC_013851.1\|WP_012970176.1\|1100584_1101454_+\|tol-pal-system-protein-YbgF	unknown	unknown	gnl\|CDD\|188247
NC_013851.1\|WP_012970171.1\|1096123_1096798_+\|protein-TolQ	unknown	unknown	gnl\|CDD\|131843
NC_013851.1\|WP_012970172.1\|1096820_1097264_+\|protein-TolR	unknown	unknown	gnl\|CDD\|274306

Protein	Function_ID	Function_description	E-value
NC_013851.1\|WP_012970178.1\|1102797_1105233_+\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	5.97923e-132
NC_013851.1\|WP_012970168.1\|1094035_1094527_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	1.86298e-93
NC_013851.1\|WP_012970180.1\|1105632_1106520_-\|hypothetical-protein	gnl\|CDD\|377281	pfam04286, DUF445, Protein of unknown function (DUF445). Predicted to be a membrane protein.	0.00901384
NC_013851.1\|WP_012970177.1\|1101492_1102749_+\|DUF3391-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	6.58374e-44
NC_013851.1\|WP_012970164.1\|1087132_1088287_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|169982	PRK09578, PRK09578, MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit.	4.57831e-84
NC_013851.1\|WP_012970179.1\|1105253_1105574_-\|BolA-family-transcriptional-regulator	gnl\|CDD\|376601	pfam01722, BolA, BolA-like protein. This family consist of the morphoprotein BolA from E. coli and its various homologs. In E. coli over expression of this protein causes round morphology and may be involved in switching the cell between elongation and septation systems during cell division. The expression of BolA is growth rate regulated and is induced during the transition into the the stationary phase. BolA is also induced by stress during early stages of growth and may have a general role in stress response. It has also been suggested that BolA can induce the transcription of penicillin binding proteins 6 and 5.	2.14278e-37
NC_013851.1\|WP_012970163.1\|1086237_1086972_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.45181e-74
NC_013851.1\|WP_012970174.1\|1098658_1099969_+\|Tol-Pal-system-beta-propeller-repeat-protein-TolB	gnl\|CDD\|179892	PRK04922, tolB, Tol-Pal system beta propeller repeat protein TolB.	0
NC_013851.1\|WP_012970175.1\|1100040_1100574_+\|peptidoglycan-associated-lipoprotein-Pal	gnl\|CDD\|274307	TIGR02802, Peptidoglycan-associated_lipoprotein, peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.	1.08021e-52
NC_013851.1\|WP_190275529.1\|1094588_1095605_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NC_013851.1\|WP_012970165.1\|1088303_1091423_+\|multidrug-efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NC_013851.1\|WP_012970182.1\|1107220_1108045_-\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	4.83726e-65
NC_013851.1\|WP_043795973.1\|1092260_1094018_+\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|180578	PRK06466, PRK06466, acetolactate synthase 3 large subunit.	0
NC_013851.1\|WP_012970183.1\|1108191_1110444_+\|transketolase	gnl\|CDD\|226466	COG3957, COG3957, Phosphoketolase [Carbohydrate transport and metabolism].	0
NC_013851.1\|WP_012970170.1\|1095687_1096110_+\|tol-pal-system-associated-acyl-CoA-thioesterase	gnl\|CDD\|274304	TIGR02799, Acyl-CoA_thioesterase_YbgC, tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import of certain organics but also in the maintenance of outer membrane integrity (by an unknown mechanism).	2.04263e-61
NC_013851.1\|WP_012970181.1\|1106581_1107157_-\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	1.18466e-30
NC_013851.1\|WP_012970176.1\|1100584_1101454_+\|tol-pal-system-protein-YbgF	gnl\|CDD\|188247	TIGR02795, Uncharacterized_protein_in_oprL_3'region, tol-pal system protein YbgF. Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction.	5.73443e-39
NC_013851.1\|WP_012970171.1\|1096123_1096798_+\|protein-TolQ	gnl\|CDD\|131843	TIGR02796, Protein_TolQ, TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	5.08218e-110
NC_013851.1\|WP_012970172.1\|1096820_1097264_+\|protein-TolR	gnl\|CDD\|274306	TIGR02801, Protein_TolR, TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	6.07152e-45

>NC_013851.1|WP_012970172.1|1096820_1097264_+|protein-TolR
MVKHSRRRTRRRLMAEINVVPYIDVMLVLLVIFMVTAPLITSGVKISLPQVKTGAITGPATESVVITVDQFGDYYIDIGAEKNQPASDQILYDRLRVVLEYQPDTPILVRGDNSVDYGRVVRAMAIAQKAGAPEVGLITVPPERREP
>NC_013851.1|WP_012970171.1|1096123_1096798_+|protein-TolQ
MTSDLSLFALILDASLVVQLVLLVLVVASVISWTMILDRTRVLGRARKLADRFEERFWSGGDLGALYKELSQDEKGGQGLAVIFRAGFKEFVRLRKVEDTDMPSVLQGAERSMRVALSREMDRLETNLAFLATVGSTSPYIGLFGTVWGIMQSFHALGNVEQATLALVAPGISEALVATAIGLFAAIPAVIAYNRYSNQVERLNNRYEEFIEEFATLLQRQGRG
>NC_013851.1|WP_012970170.1|1095687_1096110_+|tol-pal-system-associated-acyl-CoA-thioesterase
MSTQTHGASAGFDWPVRVYYEDTDAAGIVFYANYLRFMERGRTEWLRALGFEQDRLRAEQGVVFAVTAVDLKYLTPARFNDLLTVRSSLSHKGGASLAFEQDILRLADQAVCCRGSVKVVCLDAATMRPRRLPDRLAAAI
>NC_013851.1|WP_190275529.1|1094588_1095605_+|ketol-acid-reductoisomerase
MNVYYDKDADLSLIQGKKVTIVGYGSQGHAHANNLKDSGVSVTVALRPGSASAAKATNAGLTVKPIEEAVADADVVMILAPDEHQGALYREQIEPNIKQGAALAFAHGFNVHFGQITPREDLDVIMIAPKGPGHLVRSTYTQGGGVPSLIAVYQDASGQARDIAMAYASANGGGRAGIIETTFREECETDLFGEQVVLCGGLTSLIQAGFETLVEAGYAPEMAYFECLHEVKLIVDLIYEGGIANMRYSISNTAEYGDLTRGPRVITSETKAEMKRILTEIQTGQFAKEFMLENQAGAASMKAMRRLGAEHQIEEVGERLREMMPWIREKKLVDKTRN
>NC_013851.1|WP_012970168.1|1094035_1094527_+|acetolactate-synthase-small-subunit
MRHIIAVLLENEAGALSRVAGLFSARGYNIESLTVAPTDDPTLSRMTLVTTGNDEIVEQIKKQLNKLIDTVKLVDLSEGDHIEREMMMVKVRAERPDREELKRLVDIFRAKIIDVTDVSYVIELTGASRKLDAFIDALPEGLIIEVVRSGPTGIARGAKGLTL
>NC_013851.1|WP_043795973.1|1092260_1094018_+|biosynthetic-type-acetolactate-synthase-large-subunit
MTDAQPDGAAPELSGAEIVIQALVDEGVELVFGYPGGSVLHIYDALFKQGSLKHILVRHEQAAAHAADGYARATGKCGVCLVTSGPGATNAVTGIATAYMDSIPMVVLTGQVPTPFIGSDAFQEVDTVGITRPCVKHNFLVKDVRDLALTIRKAFHIATTGRPGPVVIDIPKDVTDPNIKIPYVYPREIKLRSYNPVEKGHLGQIRKAVDLMLAAKRPVFYTGGGVVLGDGSAQLTELVKATGFPITSTLMGLGAFPMTDPQFLGMLGMHGTYEANMAMHETDVLIAIGARFDDRVTGKIEHFCPHAQIIHIDVDPSSISKNVKVDVPIVGQVASVLADMLRLYREQQPKSPVNALGDWWAKIGEWRALDCLKYPTSAEAIKPQFAVETLYKVTNGELYLASDVGQHQMFAAQFYPFDKPRRWINSGGLGTMGYGLPAAIGAQLAHPEAQVACISGDASILMCIQELATCQQYRLPIKVVLLNNGYMGMVRQWQELFYESRYSHSYVDALPDFVKLAESFGHVGMRVERPEHLEDAMREAFAMRDRFVFLDVIVDPTENVYPMIAAGKGHHEMQLSPSHSDRELA
>NC_013851.1|WP_043795529.1|1091517_1092024_+|hypothetical-protein
MDRQWILVKTAKGQEEIRTKAYKLPARLRRLLIMIDGRSTVGETLDRLASLNDDLEGHLNTLLADGFLAPRDAVPSIAAALSQQPEFNLAKAKGFARFVILGTLGPVGARRVQRIEAAGSVAELRAELDDLRDALPALLSKRQAKDVWGQLEPLMLSIGIGSDPPVDH
>NC_013851.1|WP_012970165.1|1088303_1091423_+|multidrug-efflux-RND-transporter-permease-subunit
MPQFFINRPVFAWVIALFIVLAGVIAIPQLPIARYPSVAPPTVTLYATYPGATPQTLNDSVVSQIERELSGVKNLLYFESSVDTSGSAQITATFKPGTDAELAQVDVQNRIKAIEPRLPQAVRQNGLQVESAASGFLMMVGMTSPNGQFDEVALNDYFARNIVQELRRIDGVGRVQLFGAEQAMRIWVDPNKLTAYGLTMNELAQAIEQQNAPIAPGRIGDEPALPGQRLTVPLTVQGQLTTPEQFAAVVLRAGADGAKVVLGDVARVELGAQSYGFSNRENGVAATSAAIQLSPGANAVRTAAAVRARLAELAPSLPAGMAYSVPFDTAPFVKVSIEKVIYTLLEAMVLVFLVMYLFLQNLRYTLIPAIVAPIALLGTFAVMLLAGFSINSLTMFGMVLAIGIIVDDAIVVVENVERLMATQGLSPREATARAMREITGAIVGITLVLTAVFIPMAFGSGSVGVIYQQFTLSMAVSILFSAFLALSLTPALCATLLRPVSADLHEKRGVLGAFNRGFERFTAGYGTRVARLAGRSGRMMAVYVVICAVLVIAAAQLPSSFLPEEDQGYFMTSIQLPTGATSERTLDVVKAYEAHVASRPALDANLVVLGFSFSGSGPNAAMAFTMLNDWDQRDGATAAEEAELAQQAMADTVEGTVMSLMPPAIDELGTSSGFTLFLQDRANRGEAALLAAQAQLLELAAQSALVSDVYPDGLPPGESIHLEIDRQKVEAMGLSFTTVSSTLSAAMGSLYVNDFPNAGRMQQVILQADAPARMQLDDVLGLRVRNASGGMVSLREVVTPVWNESPQQMMRFQGFPAVRLAGGAAPGVSSGAAMAEMERLVAQLPSGFAVAWTGQSLQERQSAAQAPLLMLLSALVVFLVLAALYESWSIPLSVMLVVPLGLLGAVAAVMLRGMPNDLFFKVGMITIIGLSAKNAILIVEFARQLHAEGRTLIDAATTAARRRLRPILMTSLAFTLGVMPLMLATGASAETQQAIGTGVFGGMLSGTVLAVFFVPAFFVFVIGMQERFAAWRAQRGAVM
>NC_013851.1|WP_012970164.1|1087132_1088287_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MGSKQRHLSILLAGLAVLGVAGCDSAQQSEEAPAPVQVSVMTLKAHELSVSEDLPGRVAAVRSAEIRAQIGGIVQRRLFEQGAEIKAGAVLFQINPAPFEAEVDSAAAALQRAEVVLARARVQVERLKPLMHTEAVSRQVYDDAVSQRDQAAADVAQAKATLARRRLDLQFASVEAPIAGRIDQALVSEGALVSPTDATPMARIQQIDQVYVDVRQSASALEALREQAGSATPELTAEILGSDGKPLGMQGRILFSGIEVDAGTGDVLLRVLVDNPQRRLLPGLYVQARIPRAHYAEALSVPQQAVTRTAGQARVWVLDAQGRAQPVAIELGELVARRYRVVSGLSAGQQVVIEGIERLSPDAQVAARPWQPAAAREQLSAVAR
>NC_013851.1|WP_012970163.1|1086237_1086972_-|response-regulator-transcription-factor
MSDLNTRVSPASPAPALVLIAEDEAEIADILAAYLQRSGLRTRHAADGREVLAMHQALEPDLLLLDVQMPHLDGWKVLSEIRSRSDTPVIMLTALDQDIDKLMGLRLGADDYVVKPFNPAEVVARVQAVLRRTRPSTPAPIQRLRVGAIQIDLDSHEASICRADRPQRLDLTLTEFKLLACLMRAPKRVFSRAELLVDCLPEGDTQERTVDSHISKLRKKLEALGIQGVPSSVWGVGYRFGGDP
>NC_013851.1|WP_012970174.1|1098658_1099969_+|Tol-Pal-system-beta-propeller-repeat-protein-TolB
MTRYSCLPRSLFVVVLILVGLGQALAAPRLNIEITGGIESAQPIAIVPFGTSEGLIPPVDMAAIIGADLARTGRFKPMPTRDMLDMPATREEVDFRDWSLLGMNNLVIGRVEPDPTGYRISFSLFDVFRGTELASSSLVSTQSGMRQTAHRIADEIHEKLTGQPGVAATRIAYITSTGSGADLTVTLRVADADGYNPQTIVSSAEPLMSPAWSPDGQRLAYVSFENKRAAIYIQELSSGRRELVASHPGINGSPAFSPDGSRLAMTLSKDGNPDIYSLNLLSRELTRLTDHYAIDTEPSWSPDGQSIIFTSDRGGSPQIYRMAATGGPAERISVEGDYNGRASYAPDGRSIVMVTRVNGAFRIGQLDLARGVTRLLSRGDLDESPSFAPNGAMVIYATIHGHRGVLATASVEGGGSQRLTQDSGQVREPAWSPLKR
>NC_013851.1|WP_012970175.1|1100040_1100574_+|peptidoglycan-associated-lipoprotein-Pal
MIEPRSRRLAALLLTVMLGGTGLAGCASKPAPSDTASRPAPIQGRPATTAPMESTRPTYAGPWEDPSSPLYQRTIYFDYDTAEIKPQYLDVIRTHARYLGSQPGTRVTLEGHTDERGTREYNLALSDQRADSVRRFMLAEGVPANQMTILSYGEERPADPGHSEQSWRLNRRVIIQY
>NC_013851.1|WP_012970176.1|1100584_1101454_+|tol-pal-system-protein-YbgF
MPPSVRFLSLPIVLVLGGLTAPSLWAADPALEGRIGRLERILENQSGSELLLQMQRLQSEVQELRGLVEQQRFDIERLQRQQRDQFLDLDARLAGTGRASGSGGGETAAPSLQPGLVDASGTGLDALPGATPSANPVTPPVPASPGSVGIPSLPAPETHGASERDLYSQGFEHLKERQYQEAKTAFNDLLRRYPQGEYADNARYWLGETYYVLREYPAALAEYDRLVELNPASAKVPGALLKIGFIQYEQNAIEQARATLERVIREYPNSTEARLARDRLERGVREARP
>NC_013851.1|WP_012970177.1|1101492_1102749_+|DUF3391-domain-containing-protein
MADTQARFIDVDELRVGLYIYLDLGWMGHPFALNNFKIDSESQIETIRGLGLRRLRWSPELSDPPTPANPETPVATPAVPLSPAEQQRRLLLDQQASLARCEREFADATRAFREILKLAPAQPELARERARAMAEGLVRGLLDQGESCIRLLSEQAGEQTSLHAINVSVIALLLGQRLGLDAAALDQLALGALLHDIGKVALPERLRWRDAVVSAAERKLFQRHVEHGVALAARMGLDPEISVIIAQHHEYADGSGFPRHLRGEELTYLSRIVTLVNHYDILCNPSNPVAAITPHQALSLMFAQSRDKFDADILAVFIRMMGVYPPGSVVVLSDGRHALVVSVNAARPLKPRVIVHDSRVARDEALVIDLDKEPELGIRQSLKPLQLPRAVFDYLLPRQRICYFFERARESMDRTQVP
>NC_013851.1|WP_012970178.1|1102797_1105233_+|EAL-domain-containing-protein
MTSDIDLAQALIDELIDAVWLVDGSDQRLLAVNRAAEELLGQGRASLVGRSMSELACTPEDLFFWEDVAAGRGDTLLSETLLRRQDGTLVTVLRRVGRVSCPDGRCLYLACFSNQSERRAVESELEKLVAELRATLESSADGILVTDLDGAIRSFNQRFAELWRLPAALLTERNDAGIHDWMVREVLDAEGYAARLQAIAQNPLLEASDLLTLRQGRVLERVTLPQYARGRPIGRVYAFRDITQRLHDEQGLKLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAELVGQRLDRSLRLWANETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTEGLPFHYVGFVKDLSETVEARQRIEQLAFNDALTGLPNRLRLTERLEFSIELARRENTRFAVLFIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGGDEFVLLLHRVESHGAELVARRLLESMAQPFELDGLKFSLSCSIGIALYPEDGETLDDLIKNADSAMYHVKEHGRGDCCFYQRQMNVGLLERVRIDHAMREALQQGHFWLAYQPQIDLVSGLVIGAEALVRWNDPDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIRLSLSVNVSATQFHQANFIDLLAQWLDETGLPPGRLELELTESILIQNVEETLRRLENLVALGVRLAIDDFGTGYSSLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLRVIAEGVETDIQRQFLLDAGCHEFQGYLCAPALEPAAFLARIAQIGLAESPSPSP
>NC_013851.1|WP_012970179.1|1105253_1105574_-|BolA-family-transcriptional-regulator
MSRKQRIETRIQETLAPLYLDVVDESYMHAVPPDSESHFKLLVVSETFADVSLVERHRRLNELLADELSQGLHALTMHTWTPEEWQAKGGVPDSPPCQGGSRNADA
>NC_013851.1|WP_012970180.1|1105632_1106520_-|hypothetical-protein
MPSLTEKLNAHGFESNDDYEFQVRCLLETPTSGIRALNIEGDGGRRKTAFANALARALDFPQILYHDFTDTHPPLPDVILPPSQDELGREEPPIEPFDRLVSEACALSEGDPTVLVLDQLQAADFREHIRLHRLIKDGFWEVRGGSYFANPNRLLIVLISEQPLYHALRQESFRLWIGRQSERQLVYHPADFGLGSDARNVFEALTQLFEALGAAPTRREFTRLLDDLRLHVRTVEHLRLSLYGRLEAIEREALSDPRLREIQHRLLEAARSWLVTEHIELADARPPPDLNQGQR
>NC_013851.1|WP_012970181.1|1106581_1107157_-|ankyrin-repeat-domain-containing-protein
MNKPYALLLVVTLLSLLAGCGPSDSGSGSHTAMAPDGPGMALIESAEQGDLSAVEQLLARNRQPNVRDSCDWTPLMKAALNGHAAIVERLLQAGAQVDAMDSGGYTAMMLAASNNHAAIVERLLDKGAMVDHQESTMGWTALIWAAKQGHVASVKALLEHQADRTLKDFEGKTAADWAREGGHEEILALLR
>NC_013851.1|WP_012970182.1|1107220_1108045_-|IclR-family-transcriptional-regulator
MSQDTPSQPADTSEDSARTPGIQVIDRAAALLDAIARYPEPVSLKILAAETGLNVSTAHRILASLIQNQFVEKDAASHYLLGRRLLQLGVRLHGNLDVRALARPVMEALRDRFGETINLTIREGDSVVYIEKATPNRMIHVQQLIGSRAPLHVTAVGKLMLGAGGEDAIRAYAQRTNLPAYTRNTLTALPDLIDACRESLARGYALDDEEAEIDVGCIGVLIRDGTGNVSAGLSVSAPIARRRLEWIEALMDAGRRLSAQLGYRADGERVRTGA
>NC_013851.1|WP_012970183.1|1108191_1110444_+|transketolase
MTQAATPISHSAAKPDFRDGILHFGTLPVDFEHLGRTPAIGEGRAAIDAIDDAAVQQTQWTADTLRYLTLQLCASKQSGHPGGFASSADAYAALVMLGHTNIVTEVGHHAPGFYSAMFLDGSLESMGIHTMTDLQARFRERDGLLGHLSGAVPGLLAPAGPLGQGQHFAMAGAYLNRDRLFPCTIGDGGLGEPYILSAMKHFHTAYPEVTNFLPVLVWNGYSQEHHSMVSRMDNDAMIAYWRAHDFERVILIDAKDFDDAGQEGAYVDSTLFGREARLAFSRAVLEGVQAAAESALGGTLTAVILKQLKGAGVHASGAKSHNLYPGDTAEKPNIAAALERGALAPEIWVLTRTNMSRAGGGPAARTVVTEFERQLPEIGRLPLHEFARGEQAVPASALANLVAELGRRDPQFVVTNADGNEASAMKAINDALKIRHPTADPLYNQSPSGQVYEPLNEDACAGLAAGIALFGGRSLWLSYESFAINGWPIVQTVGQAMAELRRRTPAMVSMFTAGALEQGRNGWTHQRPEIENYIGGQVRNGNVYLLYPADANMIQAAYAWAVEQSNKCISIVASKSALPVHTTLDQAREAIERGAICLYESAPGARGTVVFAVTGDMVFQPVFAAKDRLEAAGYRVRIVAVVNPRRLYRERDVAWSHSAQPDGRFMSDAEFEALFAGDVLIGVSGGGTVALEPVLLRSRAAGRDLIGWQRGETTASPAEIMAYNGISPESLERRALELLDSEDARLDRAA

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Crispr_ID: NC_013851_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013851_5

2929163-2929250

TypeV-U4

I-F

Consensus_repeat	Method
ACTGCCGAGTAGGCAGCTCAGAAAATCA	CRISPRCasFinder

1 spacers

c2c9_V-U4

The CRISPR arrays of NC_013851_5

>merge|NC_013851|5|2929163-2929250|CRISPRCasFinder
ACTGCCGAGTAGGCAGCTCAGAAAATCAATTGCTGCAAATCGTCAGCGTTCCCATGATTCACTGCCGAGTAGGCAGCTCAAAAATCAT

>NC_013851|5|5|2929163-2929250|CRISPRCasFinder
ACTGCCGAGTAGGCAGCTCAGAAAATCA	ATTGCTGCAAATCGTCAGCGTTCCCATGATTC
ACTGCCGAGTAGGCAGCTCAAAAATCAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_013851.1\|WP_012971781.1\|2933981_2935457_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
NC_013851.1\|WP_012971770.1\|2923387_2924074_-\|TIGR00266-family-protein	unknown	unknown	gnl\|CDD\|376704
NC_013851.1\|WP_012971779.1\|2931567_2932047_+\|DsrE/DsrF/DrsH-like-family-protein	unknown	unknown	gnl\|CDD\|379334
NC_013851.1\|WP_012971768.1\|2921618_2922659_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|379745
NC_013851.1\|WP_012971784.1\|2940396_2942571_+\|malate-synthase-G	unknown	unknown	gnl\|CDD\|235097
NC_013851.1\|WP_012971766.1\|2919768_2920347_-\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
NC_013851.1\|WP_012971777.1\|2930773_2931097_+\|rhd_2599-family-sulfurtransferase	unknown	unknown	gnl\|CDD\|238089
NC_013851.1\|WP_012971774.1\|2927404_2927821_-\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NC_013851.1\|WP_012971778.1\|2931214_2931445_+\|sulfurtransferase-TusA-family-protein	unknown	unknown	gnl\|CDD\|238180
NC_013851.1\|WP_012971771.1\|2924238_2924817_-\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
NC_013851.1\|WP_012971785.1\|2942706_2942970_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197903
NC_013851.1\|WP_012971780.1\|2932117_2933851_+\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|272915
NC_013851.1\|WP_012971769.1\|2922676_2923273_-\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
NC_013851.1\|WP_012971783.1\|2935911_2940222_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|274362
NC_013851.1\|WP_043796310.1\|2935456_2935915_+\|response-regulator	unknown	unknown	gnl\|CDD\|381108
NC_013851.1\|WP_050750376.1\|2920446_2921601_-\|phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|379740
NC_013851.1\|WP_012971775.1\|2927842_2929063_+\|transposase	c2c9_V-U4	-	gnl\|CDD\|223747
NC_013851.1\|WP_012971786.1\|2943067_2944105_+\|glycosyltransferase-family-9-protein	unknown	unknown	gnl\|CDD\|223928
NC_013851.1\|WP_012971772.1\|2924956_2926690_+\|Eco57I-restriction-modification-methylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|380293
NC_013851.1\|WP_012971765.1\|2918578_2919772_-\|TerD-family-protein	unknown	unknown	gnl\|CDD\|226595

Protein	Function_ID	Function_description	E-value
NC_013851.1\|WP_012971781.1\|2933981_2935457_+\|HAMP-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	4.97141e-52
NC_013851.1\|WP_012971770.1\|2923387_2924074_-\|TIGR00266-family-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	1.69589e-62
NC_013851.1\|WP_012971779.1\|2931567_2932047_+\|DsrE/DsrF/DrsH-like-family-protein	gnl\|CDD\|379334	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family. DsrE is a small soluble protein involved in intracellular sulfur reduction. The family also includes YrkE proteins.	1.20478e-60
NC_013851.1\|WP_012971768.1\|2921618_2922659_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|379745	pfam15632, ATPgrasp_Ter, ATP-grasp in the biosynthetic pathway with Ter operon. This ATP-grasp family is related to carbamoyl phosphate synthetase. These genes are found in the biosynthetic operon associated with the Ter stress response operon and are predicted to be involved in the biosynthesis of a ribo-nucleoside involved in stress response.	7.4797e-41
NC_013851.1\|WP_012971784.1\|2940396_2942571_+\|malate-synthase-G	gnl\|CDD\|235097	PRK02999, PRK02999, malate synthase G; Provisional.	0
NC_013851.1\|WP_012971766.1\|2919768_2920347_-\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	1.14511e-120
NC_013851.1\|WP_012971777.1\|2930773_2931097_+\|rhd_2599-family-sulfurtransferase	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	1.65472e-29
NC_013851.1\|WP_012971774.1\|2927404_2927821_-\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.46331e-54
NC_013851.1\|WP_012971778.1\|2931214_2931445_+\|sulfurtransferase-TusA-family-protein	gnl\|CDD\|238180	cd00291, SirA_YedF_YeeD, SirA, YedF, and YeeD. Two-layered alpha/beta sandwich domain. SirA (also known as UvrY, and YhhP) belongs to a family of bacterial two-component response regulators that controls secondary metabolism and virulence. The other member of this two-component system is a sensor kinase called BarA which phosphorylates SirA. A variety of microorganisms have similar proteins, all of which contain a common CPxP sequence motif in the N-terminal region. YhhP is suggested to be important for normal cell division and growth in rich nutrient medium. Moreover, despite a low primary sequence similarity, the YccP structure closely resembles the non-homologous C-terminal RNA-binding domain of E. coli translation initiation factor IF3. The signature CPxP motif serves to stabilize the N-terminal helix as part of the N-capping box and might be important in mRNA-binding.	3.25411e-30
NC_013851.1\|WP_012971771.1\|2924238_2924817_-\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	2.22181e-117
NC_013851.1\|WP_012971785.1\|2942706_2942970_+\|hypothetical-protein	gnl\|CDD\|197903	smart00834, CxxC_CXXC_SSSS, Putative regulatory protein. CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.	0.0050228
NC_013851.1\|WP_012971780.1\|2932117_2933851_+\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|272915	TIGR00118, Probable_acetolactate_synthase_large_subunit, acetolactate synthase, large subunit, biosynthetic type. Two groups of proteins form acetolactate from two molecules of pyruvate. The type of acetolactate synthase described in this model also catalyzes the formation of acetohydroxybutyrate from pyruvate and 2-oxobutyrate, an early step in the branched chain amino acid biosynthesis; it is therefore also termed acetohydroxyacid synthase. In bacteria, this catalytic chain is associated with a smaller regulatory chain in an alpha2/beta2 heterotetramer. Acetolactate synthase is a thiamine pyrophosphate enzyme. In this type, FAD and Mg++ are also found. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed. [Amino acid biosynthesis, Pyruvate family].	0
NC_013851.1\|WP_012971769.1\|2922676_2923273_-\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	1.49868e-72
NC_013851.1\|WP_012971783.1\|2935911_2940222_+\|PAS-domain-S-box-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	4.10224e-90
NC_013851.1\|WP_043796310.1\|2935456_2935915_+\|response-regulator	gnl\|CDD\|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	5.99861e-64
NC_013851.1\|WP_050750376.1\|2920446_2921601_-\|phosphoribosyltransferase	gnl\|CDD\|379740	pfam15609, PRTase_2, Phosphoribosyl transferase. This PRTase family, and C-terminal TRSP domain, are related to OPRTases, and are predicted to use Orotate as substrate. These genes are found in the biosynthetic operon associated with the Ter stress-response operon and are predicted to be involved in the biosynthesis of a ribo-nucleoside involved in stress response.	3.25739e-79
NC_013851.1\|WP_012971775.1\|2927842_2929063_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.8223e-55
NC_013851.1\|WP_012971786.1\|2943067_2944105_+\|glycosyltransferase-family-9-protein	gnl\|CDD\|223928	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane].	1.94837e-72
NC_013851.1\|WP_012971772.1\|2924956_2926690_+\|Eco57I-restriction-modification-methylase-domain-containing-protein	gnl\|CDD\|380293	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated with PGL (phage growth limitation), a type 2 BREX (bacteriophage exclusion) system. The phage resistance appears not be restriction, but does manage to inhibit phage replication.	0.00257611
NC_013851.1\|WP_012971765.1\|2918578_2919772_-\|TerD-family-protein	gnl\|CDD\|226595	COG4110, COG4110, Uncharacterized protein involved in stress response [General function prediction only].	4.76083e-80

>NC_013851.1|WP_012971775.1|2927842_2929063_+|transposase
MQRHQAFKYALRPTGQQERQMRRVAGSCRFVYNQALALQKARHEHGDKKLGYAELCKRLTAWRNGAQTPWLAEAPVHPLQQTLKDLERAYTNFFAQRAAFPRFKKKGQGDSFRYPDPKQIKLDQANRRIFLPKLGWLRYRHSRDVLGAVKNVTVSRSGGQWFVSIQTERAVDPPIPNGGAVGLDLGIVRFATLSDGTYYAPLNSFKRHETALRQAQQALSRKVKFSRNWKKAKARVQKIHSRIGNARRDYLHKTSTTISQNHAMVCIEDLPVRNMSKSAAGTTEQPGKNVRAKSGLNKSILDQGWFEFRRQLDYKLAWKGGWLIAVPPRNTSRTCPCCGHVSADNRRTQARFACVECGFEEHADLVGAINVLRAGHARFACEVSGAVRPPAAGTHRSDSGTAQCRV
>NC_013851.1|WP_012971774.1|2927404_2927821_-|IS200/IS605-family-transposase
MSSDNDLRRGRQCVFLMHVHLVFVTKYRRGVFTKDILEDLRHIFTKVCIDFEAQLIEMDGEDDHVHLLVEYPPKAAVSSLVNSLKGVSSRLIRAKNYPSLRRKLWGRALWSPSYFASSCGGAPISIVRQYIEQQRTPH
>NC_013851.1|WP_012971772.1|2924956_2926690_+|Eco57I-restriction-modification-methylase-domain-containing-protein
MSPLLDILGPTARCSAIKGALARLARQRGAASTPPAVVNALLDLAGHTPDRPLYRRRLLEPAFGRGEVLLAAIERLLASYSLAGGQASEAVHALRDAIRAVELHVAGHDAAARAVEARLIAAGLSERDAHRLRTIWLVRDDFLLCHLNGEFDCVVGHPPQTRLERLPSVLRREYRRRFHTLYDRADVSIAFFERALDRLAPAGRLGFVGSSRWLKNKSGGPLRTKIALEFALTHFIDLEGLEAFTSNGIAESALMFIERPPVEFHDAVSGCTRLVKPGVLSLPEQLPYLVTALGAESLDEALLAEVRLGGARRDAPWLLDGGEHLDLIHRFEHAYPTLNEAGCQIGHGVATGCDRVFIDDYPSLPVESACKLPLIMARDLVDGEIQWHGQGVINPFQPDGRLVDLDEHPRLADYLERHRAAIAGRHVARRNPTAWYRTIDRIDPSLVGQPKLLMADVKGETKVVFDEGHFYPHHSLCYVTTSEWEPRALQAVLCSSVAVAMIATYGTRSAGGSTRLQASSLRRLRIPRWAEVSETQRTELAAVALDGDRDAIDEAVFRLYGLDGREAEYIRAMARWH
>NC_013851.1|WP_012971771.1|2924238_2924817_-|TerD-family-protein
MAISLQKGGNVSLTKTDPGLTNVQVGLGWDARSTDGAAFDLDASVFLVGDDGKVLSDGHFVFYNQKTSPDGAVIHAGDNTTGAGEGDDEVVTINLPGVEAGVKRVVFAVTIHEAESRKQNFGMVRNAFMRVLNKDSNTELARFDLSEDYSIETAMIFGEIYRNGEEWKFKAVGQGFAGGLAALAKDHGVNIG
>NC_013851.1|WP_012971770.1|2923387_2924074_-|TIGR00266-family-protein
MPVFTVTGEIDPFLHVSLRKGERIFCESGAMVMMEEPLQVKGQMRGGFGRALLRRLANDESFFQQEIEAVGGDGDCLLSPNLPGAIELLDVTPNSPYTLSDSSFLAAESGVEINPRLNTVGGGLFGGTGGFVIMEAVGHGKLAVSGFGSIFSLEVTPGRDIVIDNNHAVAWSSNLLYEVGMPRTGGGFFGSIVNSVTSGEGLVIRFRGQGKVVICSRNKAIFQPQQGQ
>NC_013851.1|WP_012971769.1|2922676_2923273_-|TerD-family-protein
MGISLQKGQKISLEKEAGGGLTRVIMGLGWDAAQSGKGGLLGGLFGGGGGESIDLDASCLLFDEAGELVDVVWFRQLTSRDGSIHHTGDNRTGEGAGDDEQIQVSLATVPANVKSLVFTVNNYTGQDFSKVANAYCRILNGADNSEIARYDLSCQGSHSAMIMAKVYRHNNEWKMHAIGEVGQGRTFDQLMPQIKPHL
>NC_013851.1|WP_012971768.1|2921618_2922659_-|ATP-grasp-domain-containing-protein
MTRVWFNRTFSNVRAVLDLIRRGDAAGEFRLVCTHPEPSFPGFVPAHEQALEPAGLSGADYVDFCLDFCRERHVDALWPGKEARLLTEQRPRFSAIGVRLLSVAAPESLERLHDKARFALEASQFHLPTPETIPFRTVAEFESAYERLRFTHDVLCIKPAKGVNGAGFRVIQEGHAGLEGLLRDGVYSIQLGCLRQLLARHPPAETWLLMEYLAGDEYSLDAVGDGRRLIALTQRRKASGGAYGQRIVARSDLTQAVSELTERFGLTGLFNAQFREGRHGPRLLEVNPRFAGGIGYTGAAGLNLPYLALRGLIQGFTEQDYQEAPRLAADMTVLEVAQYERHEVAA
>NC_013851.1|WP_050750376.1|2920446_2921601_-|phosphoribosyltransferase
MTERSVRLDTGTLRVRVRESAFALDELCGFAARHNRKRGFLFLSKVLGKHWPVTPTRMREIHAHLAGQLDLGAGPCLFVAMAETATGLGQGVFESRLEQRPETEALFIHSTRYRVDGRAALDFQEAHCHAPDQLLYAPIQPEQRRRFESARELVLIDDEISTGNTLCNLVESYRRLNPGIERVHFVAITQFGGADSAVRFSERLGLPVECVAALHGEFAFEPAASWFTDEPPPAVGDNRLMPHDLAEDLGRFGIDRPITVPSMDLEELAEGLESGDPVLVLGTGEFMHLAFRVGLGLEALGLRVAVQATSRSPILVGADVGRRLVFADNYGEGILNYLYNVDPDDYVRIIVCHETPRAGLDDLLQNLGPRHRPYQPRATARKGS
>NC_013851.1|WP_012971766.1|2919768_2920347_-|TerD-family-protein
MAISLNKGGNVNLSKEAPNLENVLVGLGWDARATDGQDFDLDASLFMVKDDGKVPSDAYFIFYNQPKSPEGAIEHTGDNRTGAGEGDDESVHVTLSKVPAEVQRLVIVVTIHDADARRQNFGQVSNAFVRIVNRDNNQEVVRFDLSEDYSTETAMIFGEIYRHSGDWKFRAVGQGYSGGLRALALQHGVNVG
>NC_013851.1|WP_012971765.1|2918578_2919772_-|TerD-family-protein
MNLSRGQRAKIADLVPNGQRFTLGVSVDAPGLIIDFACFGLDARGQLADERYMTFFNQPTSPCGGVALSVPSGDKAGFAIDLGRLPAGIERLTLTAAIDGAGTMSRIGRGHVRLMDGASEVGRFEFSGADFAEERALMLLEIYRKDGIWRTCALGQGFNGGLAALVAHFGGTVAPETPAPPPPEPPKPQPSPVNLSKITLDKRGNSVSLQKQANASHGEILINLKWRSLSGAKKGFLSGLMGSNRTDLDVGCLYELINGDKSAVQALGNTFGNYYGPPYIALDADDRTGSSSSGENLRINGQHWDEIKRVLVYAFIYEGAPNWAEAEALITLKTPGQPEIEVRLDSHRNDRPMCAIALLENQGGAVKITKLVDYHRGHLDMDQAHHWGLEWVRGSKD
>NC_013851.1|WP_012971777.1|2930773_2931097_+|rhd_2599-family-sulfurtransferase
MVNEIDSESLSQRLADTEDVLLVDIRTPAEIAQGMIPDALQLPMHLIPIRMSEIPKDRDVVIYCRSGARSYQACAYLMQQGYGRVLNLRGGIIAWARHGLPIVAPEG
>NC_013851.1|WP_012971778.1|2931214_2931445_+|sulfurtransferase-TusA-family-protein
MADFDQELDASGLNCPLPILRAKKTLNAMSSGQVLHVIATDPGSVKDFDAFAKQTGNELMESKEEGGKFHFLIKKS
>NC_013851.1|WP_012971779.1|2931567_2932047_+|DsrE/DsrF/DrsH-like-family-protein
MEQKKLAIIATKGSLDWAYPPFILASTAAALGYEVQVFFTFYGLQLLKKKPNLEVTPLGNPGMPMPMGMDKWFPVLGLALPGMQGMMTAMMKQKMKSKGVASIEELRELCQEAEVKMIACQMTVDLFDMPKAEFIDGVEYAGAAAFFEFAGESDICLYI
>NC_013851.1|WP_012971780.1|2932117_2933851_+|biosynthetic-type-acetolactate-synthase-large-subunit
MPNDNRTGAAILLDVLNDLGVETIFGHTGGAVIPIHVEINKRLRAGTPVPRFVLCRQEGGAGHAAEGYARASGRVGVALATSGPGATNLITPIADAYKDSLPTLFITGQVPSRAIGTDAFQEVDMVGLTRPISKHNYLVKDVADLEWVLREAHALAMHGRPGPVVVDICKDVQLTALETANVPRVRHRESVDFDAARADAILEALARAERPVVKAGGGVIHANAALALQRFAERFDVPVTTTFNALGALPFELAYNLGMPGMHGTVPANYALRDADLILSLGGRFDDRVAVRGFAEGKRIAHVDIDPSEIDKTIATDLNLVATLDEFLAHALASGRSARHPEWMTLIGEWRQRMMPPYGQSEYIKPQAAIEVISDLTGGEATLVTGVGQHQMWSAQYYRFRRPRQWISSGGLGTMGFGLPAAIGAWYGDPTHPVVLIDGDGSFQMNIQELGTVVANRIPLKIFVLNNSFLGMVRQWEDMMDDGHHYETCLARTADCDPDCIDLDQGCRRQIPNLTGLKHVYPRLKTVRLRDPETLREDIAAVLAEPGPVLVDVWIDKAENVIPMIRPGHSLEQMIES
>NC_013851.1|WP_012971781.1|2933981_2935457_+|HAMP-domain-containing-protein
MGIKAKLKLIGLLPLLVAIVFGVTIYRGQDRLNALSHLALKTDAMREALRDVRDVSRLILATRDNAIRREGYDALEIVNRGMADLAVWRDEPGLGEIIHGLERHLLMARIHYEMLDGLTVPMLKWIAVPQISEVEQNLMRELDALDTRLRALHQTARAALVEHSERLWRREFWLLTLTAVLVLWLTHPILDRIGTALHTLTQGTRRIGPNGLPKQLDLTGEDEFGQLARDFNTMVRRLAESEVARAERSRDLEAAVQDLENFSYSVSHDLRAPLRAIDGFIGILREDYAANLDAEGLRLFGVVSANARKMERLIDDILALSRAGRLAMEWVTVDMNQMVDEVWSDLLETASGRPIQFQRADLPNCQGDPRAIRQIWQNLLGNALKFTRDRDPARIQVSARAETGCIRYSVEDNGAGFDPAYSAKLFCLFQRLHGVDEFEGTGVGLAIVKRFVQRHHGQVEAGGAVNGGAVFAFSLPIDPESFTAAANAEDG
>NC_013851.1|WP_043796310.1|2935456_2935915_+|response-regulator
MVTQDSMVDILLVEDNPNDAELAMRALRKHNLANRLEWVKDGAAALDFLFHRGDYTQCPNILPRVVLLDLRLPKVDGIEVLREIRAHAETRELPVVVLTSSHEERDLVATYELGVNSFVAKPVAFDEFARTVAELGMYWVLVNRVPPEIRST
>NC_013851.1|WP_012971783.1|2935911_2940222_+|PAS-domain-S-box-protein
MTARPLRLLLLEDNPADAELNERVLRRAGVAFESRRVETREDFLVALDDFKPDAILADFGLPRFDGRTAMQLAHERDPDWPFIFVTGALGEESAVELLRNGASDYILKDRLTRLPEALERALEAARQRADLRLMARRASGLLELPRVAEHFGEAEFLQFGQTLVEDLTGSRIAFIHRVSEDQTTIDLVTWSHRTLDAGCLAAPPLHESVDQAGLWADALRQQRPIVVNDDPTAAERRGRSEEGHIPLERFISLPVIEGGRVVMLFCIGNKEAPYTELDVETLQLVANELWRILCQRRAEQDLRESEARFHALFEHMRSGVCIYEAIEDGRDFIIRDLNHAVEYIEGVEATKLLGRRLTEVFPGVAECGFLDVFARVWRTGRAEHIPPRLYHDQRIQGWRENFVYRLPHGELVAVYDDVTERRTLQLALEESRERLELALEGSELGMWDWRVQTGEVRFNDRWARILGYRLDELEPISIQTWNDLCHPDDRARVDRQLRRHFQGETAHYECEIRMRHKDGHWVWILDRGKVVEWGPDQRPVRMAGTHLDITERRQTEEKLHQLSLAVEQSPTSIVITDLDACIEYANPAFTRVSGYTLEEAIGQNPRLLQSGQTPREIYEDLWVTLQRGEVWRGELHNKRKDDELYVELATISPVRQPDGRVTHYLAVKEDITDLKCAQEELDRYRQHLEELVETRTRELQLAEEHSRLILESSADGLYGVDIAGRTTFVNPAACAMLGYTPEQLLGRPSHEIIHHSHVDGRHYPMEDCLLHSTLLNGEVLRGDDEVFWRADGTPLPVSYSSHPIRREGEIVGAVVSFIDVSTQKQAEAAREAALAEAERLARLKSEFLANMSHEIRTPLNAVLGFAQIGARETDPNRARTFFRRILDSGQLLLGIINDILDFSKIEAGKLDIHDAEVDLRAVIERSVDLLTTRAKDKGLRFSLEEDPNLPATFMGDDLRLSQVLANLLSNAVKFTDQGAVTFGIRREEGWIVFSVEDTGIGMHEDYLANLFQPFEQADGSITRRYGGSGLGLAISKRLVELMGGEIRAWSRFGEGTRFETRLPLIEPRGVIGPGRLITETAPPDWTGARLSGVRLLAAEDNPANRLVLEEMLRAEDCDLTLVEDGRQAVDCVEREGPAAFDMVLMDIQMPVMDGMEATQRIHQFAPGLPVVGLTAHALNSERHLCLQAGMVDHIAKPVDIEQLIAIIVRHVRHRPLTLDKTREPRIRKRTVEPARTDAPEAQTTATPETWVEWPALESRYAHNPDFIPRLLRAVLESNQEQADLLREAAHQGDRDRLVFIAHRLKGTAGNLFAKSVHALATETEKRARALDIEAPRLALELADALDGLLTEIAASRWVSSQAETAGDGADIATILTQLADLLDTDNTEANQLYARHQDLLRRALGECAERLGAEIKDFDYQAARETLRTLIESGTA
>NC_013851.1|WP_012971784.1|2940396_2942571_+|malate-synthase-G
MTDYLDIGGLKVAQPLHDLVRDEITPGIGIDPAAFWQSFGEIVREFAPRHRELLAKRDALQQQIDAWHRTHRDQPLDLAAYRDFLVEIGYLLPEGPDFTVNTSNVDPEIATIAGPQLVVPVSNARYALNAANARWGSLYDALYGTDAIPEDEGLERGAEFNPARAAAVVERAAIFLDEAVPLNRGSHTDACGYKLENGKLVVLLPDNSETLLADPAQFAGFRGNPDQLDAVLLVNHGLHIEIRIDRNHPIGAGSAAGVADILLESAVTSIQDCEDSVAAVDTEDKVGVYRNWLGLMKGDLTAGFSKGGRMVERTLAEDRTYSRLGTGSLTLPGRSLMLVRNVGHLMTTDVVLDAEGREIPEGLMDGMITVLCALHDVHPEHGARRNSRTGSVYIVKPKMHGPEEVQLAVDLFGRIEDALGLARNTLKIGIMDEERRTTLNLKECIRAARERIIFINTGFLDRTGDEIHTDMEAGAVLRKGDMKGAAWLRAYEDWNVDVGLACGLRGQAQIGKGMWTMPDEMAAMLAAKSAHPQAGASCAWVPSPTAATLHAMHYHQIDVAAIQAELAKGERRATLDDLLQIPLDPNRAWTPEEIQAELDNNCQGILGYVVRWVDQGVGCSKVPDIANVGLMEDRATLRISNQHVANWLHHGVVSESQVMESLKRMAAVVDTQNAGDPLYRPMAPGFDGVAFQAACDLVFKGREAPNGYTEPTLHAMRRRFKAGS
>NC_013851.1|WP_012971785.1|2942706_2942970_+|hypothetical-protein
MPTYDYRCDTNDRVIEVSHRMSETLTSWGELCERAGVELGDTPADAPVHRLATGGNVITSSSLGSGCTPAPSCATGSCCGGGMCGLN
>NC_013851.1|WP_012971786.1|2943067_2944105_+|glycosyltransferase-family-9-protein
MKSILVVRLSAIGDIVFASPLVAALRRRWPEARIAWLVQPECAALLDRHPDLDAVIVCPLRHWQRLWRERRYRELWAGIRTLRANLREQDFDLALDLQGLLKSGLLTWLSGARERIGLGSREGSQWLMTRRLPRGGDSRLIGSEYRFLAESLALPVADGFPMAVHYGEAEAAFAESVIARESLSNGYAVFCPFTTRPQKHWIEERWARLAHRVRDELGLVPVLLGGPGDREAARRIADAADDQLIDLTGQTSLTEAAALIDRAALLIGVDTGLSHMGIAFDTPSLLLFGSTCPYLDTTRAKARVLHHALPCSPCKRRPICDGRFDCMRAIEADEILRAADEVLRA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	319595-319626	5	0.844
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	266088-266119	5	0.844
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	154149-154180	5	0.844
NC_013851_3	3.71\|761077\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761077-761108	32	KY087993	Mycobacterium phage Hammy, complete genome	56487-56518	5	0.844
NC_013851_3	3.71\|761077\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761077-761108	32	MF140398	Mycobacterium phage Amohnition, complete genome	56644-56675	5	0.844
NC_013851_3	3.71\|761077\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761077-761108	32	MF140406	Mycobacterium phage DarthP, complete genome	56497-56528	5	0.844
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	CP003950	Rhodococcus opacus PD630 plasmid 1, complete sequence	42355-42386	6	0.812
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1953492-1953523	6	0.812
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	324951-324982	6	0.812
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1488115-1488146	6	0.812
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	64415-64446	6	0.812
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	216154-216185	6	0.812
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP039694	Agrobacterium larrymoorei strain CFBP5473 plasmid pTiCFBP5473, complete sequence	313426-313457	6	0.812
NC_013851_3	3.46\|759552\|32\|NC_013851\|CRISPRCasFinder,CRT	759552-759583	32	NZ_CP034302	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-3, complete sequence	28481-28512	6	0.812
NC_013851_3	3.52\|759918\|32\|NC_013851\|CRISPRCasFinder,CRT	759918-759949	32	NZ_CP017942	Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence	221696-221727	6	0.812
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	MF668280	Mycobacterium phage Phabba, complete genome	110749-110780	6	0.812
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NC_011273	Mycobacterium phage Myrna, complete genome	110814-110845	6	0.812
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	344369-344400	6	0.812
NC_013851_3	3.60\|760406\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760406-760437	32	NZ_CP016891	Pantoea agglomerans strain C410P1 plasmid unnamed2, complete sequence	15106-15137	6	0.812
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	NZ_CP009123	Sphingopyxis fribergensis strain Kp5.2 plasmid pSfKp5.2, complete sequence	196763-196794	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP025426	Enterococcus faecium strain SC4 plasmid p1, complete sequence	151603-151634	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	LT603679	Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 2	67662-67693	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP040369	Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence	110513-110544	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP043485	Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence	100041-100072	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP020485	Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence	24517-24548	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP013995	Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence	117725-117756	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP027518	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence	145435-145466	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP027498	Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence	66230-66261	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP027507	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence	43668-43699	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	140884-140915	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_LR135236	Enterococcus faecium isolate E7067 plasmid 2	74629-74660	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP019209	Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence	176315-176346	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_LR135429	Enterococcus faecium isolate E8927 plasmid 2	96780-96811	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_LR135476	Enterococcus faecium isolate E8423 plasmid 2	146310-146341	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_LR135220	Enterococcus faecium isolate E7040 plasmid 2	74979-75010	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_LR135358	Enterococcus faecium isolate E7948 plasmid 2	162891-162922	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_LR135352	Enterococcus faecium isolate E8014 plasmid 2	145438-145469	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_LR134106	Enterococcus faecium isolate E6043 plasmid 2	74979-75010	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP011829	Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence	207019-207050	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP045013	Enterococcus faecium strain LAC7.2 plasmid pI, complete sequence	93235-93266	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	180621-180652	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP040741	Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence	142967-142998	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	118412-118443	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP019993	Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence	192620-192651	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	83918-83949	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP035137	Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence	51366-51397	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP035661	Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence	77551-77582	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP035667	Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence	77553-77584	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	83923-83954	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP035221	Enterococcus faecium strain SRCM103470 plasmid unnamed1	196309-196340	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	LR135186	Enterococcus faecium isolate E4413 genome assembly, plasmid: 2	85299-85330	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_CP042833	Enterococcus faecium strain FA3 plasmid unnamed1	134821-134852	6	0.812
NC_013851_3	3.80\|761627\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761627-761658	32	NZ_MG674581	Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence	68871-68902	6	0.812
NC_013851_3	3.5\|757050\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757050-757081	32	NZ_CP023740	Methylosinus trichosporium OB3b plasmid pOB3b3, complete sequence	124628-124659	7	0.781
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	157347-157378	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP029835	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence	234783-234814	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1510720-1510751	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	456108-456139	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	288886-288917	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP039644	Azospirillum sp. TSA2s plasmid p2, complete sequence	12851-12882	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP039640	Azospirillum sp. TSH100 plasmid p1, complete sequence	41785-41816	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	478090-478121	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	478098-478129	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1272097-1272128	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	115103-115134	7	0.781
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1478876-1478907	7	0.781
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP023740	Methylosinus trichosporium OB3b plasmid pOB3b3, complete sequence	109134-109165	7	0.781
NC_013851_3	3.27\|758393\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758393-758424	32	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	262817-262848	7	0.781
NC_013851_3	3.30\|758576\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758576-758607	32	MW057859	Providencia phage PSTCR8lys, complete genome	9569-9600	7	0.781
NC_013851_3	3.32\|758698\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758698-758729	32	NZ_CP042181	Pseudomonas sp. KBS0802 plasmid unnamed, complete sequence	48789-48820	7	0.781
NC_013851_3	3.32\|758698\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758698-758729	32	NC_003350	Pseudomonas putida plasmid pWW0, complete sequence	50512-50543	7	0.781
NC_013851_3	3.35\|758881\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758881-758912	32	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	310571-310602	7	0.781
NC_013851_3	3.41\|759247\|32\|NC_013851\|CRISPRCasFinder,CRT	759247-759278	32	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	249447-249478	7	0.781
NC_013851_3	3.41\|759247\|32\|NC_013851\|CRISPRCasFinder,CRT	759247-759278	32	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	249447-249478	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP051472	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10C, complete sequence	41496-41527	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP012965	Rhodobacter sphaeroides strain MBTLJ-8 plasmid unnamed, complete sequence	40940-40971	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP030275	Rhodobacter sphaeroides 2.4.1 plasmid pC, complete sequence	38980-39011	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	CP047035	Rhodobacter sphaeroides strain DSM 158 plasmid pC, complete sequence	41059-41090	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP015292	Rhodobacter sphaeroides strain MBTLJ-20 plasmid d, complete sequence	90410-90441	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP047041	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pC, complete sequence	41028-41059	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP015214	Rhodobacter sphaeroides strain MBTLJ-13 plasmid c, complete sequence	56272-56303	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	MN234185	Mycobacterium phage Lemuria, complete genome	14126-14157	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	388842-388873	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1822934-1822965	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	736384-736415	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1203452-1203483	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	333409-333440	7	0.781
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	928922-928953	7	0.781
NC_013851_3	3.60\|760406\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760406-760437	32	MH019216	Streptomyces phage Wentworth, complete genome	56770-56801	7	0.781
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	128214-128245	7	0.781
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	NZ_LR134450	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence	117292-117323	7	0.781
NC_013851_3	3.76\|761383\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761383-761414	32	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	253016-253047	7	0.781
NC_013851_3	3.76\|761383\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761383-761414	32	MK059749	Mycobacterium phage CRB2, complete genome	12752-12783	7	0.781
NC_013851_3	3.83\|761810\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761810-761841	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	1113651-1113682	7	0.781
NC_013851_3	3.84\|761871\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761871-761902	32	NC_014159	Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence	81234-81265	7	0.781
NC_013851_3	3.84\|761871\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761871-761902	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	639337-639368	7	0.781
NC_013851_3	3.84\|761871\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761871-761902	32	NZ_CP029776	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence	67250-67281	7	0.781
NC_013851_3	3.85\|761932\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761932-761963	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5878802-5878833	7	0.781
NC_013851_3	3.2\|756867\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	756867-756898	32	NZ_CP019438	Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence	130819-130850	8	0.75
NC_013851_3	3.2\|756867\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	756867-756898	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	830710-830741	8	0.75
NC_013851_3	3.2\|756867\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	756867-756898	32	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	690134-690165	8	0.75
NC_013851_3	3.4\|756989\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	756989-757020	32	MK557849	Caudovirales GX15bay, complete genome	49750-49781	8	0.75
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	MF141540	Mycobacterium phage Avocado, complete genome	14010-14041	8	0.75
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	KR080198	Mycobacterium phage Cambiare, complete genome	14472-14503	8	0.75
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	KR080197	Mycobacterium phage FlagStaff, complete genome	13949-13980	8	0.75
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	NZ_CP011383	Calothrix sp. 336/3 plasmid unnamed1	55353-55384	8	0.75
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	MN234196	Gordonia phage CloverMinnie, complete genome	22464-22495	8	0.75
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	MG770214	Gordonia phage SteveFrench, complete genome	71785-71816	8	0.75
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NC_015498	Glaciecola sp. 4H-3-7+YE-5 plasmid pGLAAG01, complete sequence	264209-264240	8	0.75
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	972879-972910	8	0.75
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1486243-1486274	8	0.75
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP030830	Neorhizobium sp. NCHU2750 plasmid pNCHU2750c, complete sequence	28956-28987	8	0.75
NC_013851_3	3.14\|757599\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757599-757630	32	NZ_CP022357	Paraphotobacterium marinum strain NSCS20N07D plasmid p1, complete sequence	797-828	8	0.75
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	233561-233592	8	0.75
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_AP014802	Rhodovulum sulfidophilum plasmid Plasmid2 DNA, complete genome, strain: DSM 2351	37351-37382	8	0.75
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	MH271316	Microbacterium phage Tandem, complete genome	18716-18747	8	0.75
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	MK376963	Microbacterium phage Alleb, complete genome	18780-18811	8	0.75
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	MH271307	Microbacterium phage OlinDD, complete genome	18793-18824	8	0.75
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	MH271300	Microbacterium phage Hortus1, complete genome	18794-18825	8	0.75
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1760002-1760033	8	0.75
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	213812-213843	8	0.75
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	588124-588155	8	0.75
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	194539-194570	8	0.75
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	499268-499299	8	0.75
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	1647-1678	8	0.75
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	712606-712637	8	0.75
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	JN968479	Haloarcula hispanica icosahedral virus 2, complete genome	28542-28573	8	0.75
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	175471-175502	8	0.75
NC_013851_3	3.18\|757843\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757843-757874	32	MK814752	Gordonia phage Lutum, complete genome	42214-42245	8	0.75
NC_013851_3	3.18\|757843\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757843-757874	32	MH779504	Gordonia phage Getalong, complete genome	43611-43642	8	0.75
NC_013851_3	3.18\|757843\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757843-757874	32	NC_048141	Gordonia phage Kenna, complete genome	41051-41082	8	0.75
NC_013851_3	3.23\|758148\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758148-758179	32	MN657144	Pedobacter sp. strain ANT_H27B plasmid pA27BH1, complete sequence	48755-48786	8	0.75
NC_013851_3	3.27\|758393\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758393-758424	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	711920-711951	8	0.75
NC_013851_3	3.27\|758393\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758393-758424	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	194075-194106	8	0.75
NC_013851_3	3.27\|758393\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758393-758424	32	NC_011962	Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence	74531-74562	8	0.75
NC_013851_3	3.32\|758698\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758698-758729	32	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	440258-440289	8	0.75
NC_013851_3	3.32\|758698\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758698-758729	32	NZ_AP017625	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728 plasmid pShTP, complete sequence	94011-94042	8	0.75
NC_013851_3	3.35\|758881\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758881-758912	32	MT310863	Streptomyces phage Issmi, complete genome	35616-35647	8	0.75
NC_013851_3	3.35\|758881\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758881-758912	32	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	146779-146810	8	0.75
NC_013851_3	3.35\|758881\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758881-758912	32	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	183407-183438	8	0.75
NC_013851_3	3.41\|759247\|32\|NC_013851\|CRISPRCasFinder,CRT	759247-759278	32	NZ_CP016879	Xanthomonas hortorum strain B07-007 plasmid pB07007, complete sequence	26525-26556	8	0.75
NC_013851_3	3.41\|759247\|32\|NC_013851\|CRISPRCasFinder,CRT	759247-759278	32	NZ_CP018733	Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.2, complete sequence	46515-46546	8	0.75
NC_013851_3	3.42\|759308\|32\|NC_013851\|CRISPRCasFinder,CRT	759308-759339	32	NZ_CP009431	Sphingopyxis macrogoltabida strain 203 plasmid unnamed, complete sequence	94182-94213	8	0.75
NC_013851_3	3.42\|759308\|32\|NC_013851\|CRISPRCasFinder,CRT	759308-759339	32	NZ_CP015744	Shinella sp. HZN7 plasmid pShin-08, complete sequence	16158-16189	8	0.75
NC_013851_3	3.59\|760345\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760345-760376	32	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	485987-486018	8	0.75
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	488877-488908	8	0.75
NC_013851_3	3.68\|760894\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760894-760925	32	MN096363	Gordonia phage Gibbles, complete genome	60044-60075	8	0.75
NC_013851_3	3.68\|760894\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760894-760925	32	MH479923	Gordonia phage RobinSparkles, complete genome	60129-60160	8	0.75
NC_013851_3	3.68\|760894\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760894-760925	32	KU998254	Gordonia phage Kampe, complete genome	60314-60345	8	0.75
NC_013851_3	3.68\|760894\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760894-760925	32	KU998252	Gordonia phage PatrickStar, complete genome	60314-60345	8	0.75
NC_013851_3	3.68\|760894\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760894-760925	32	NC_030915	Gordonia phage Orchid, complete genome	60315-60346	8	0.75
NC_013851_3	3.71\|761077\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761077-761108	32	NZ_CP022191	Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence	110477-110508	8	0.75
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	173281-173312	8	0.75
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	NC_011273	Mycobacterium phage Myrna, complete genome	148819-148850	8	0.75
NC_013851_3	3.81\|761688\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761688-761719	32	NZ_CP048282	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence	414500-414531	8	0.75
NC_013851_3	3.83\|761810\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761810-761841	32	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	166516-166547	8	0.75
NC_013851_3	3.83\|761810\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761810-761841	32	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	145446-145477	8	0.75
NC_013851_3	3.83\|761810\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761810-761841	32	MH719194	Pseudomonas phage Ps60, complete genome	19291-19322	8	0.75
NC_013851_3	3.83\|761810\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761810-761841	32	JX495043	Pseudomonas phage JBD67, partial genome	18321-18352	8	0.75
NC_013851_3	3.83\|761810\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761810-761841	32	LN898172	Pseudomonas phage vB_PaeS_PM105	19254-19285	8	0.75
NC_013851_3	3.83\|761810\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761810-761841	32	MN536027	Pseudomonas phage vB_Pae-SS2019XII, complete genome	3931-3962	8	0.75
NC_013851_3	3.84\|761871\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761871-761902	32	NZ_CP012918	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p4, complete sequence	121687-121718	8	0.75
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	179123-179154	9	0.719
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	212149-212180	9	0.719
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	MG099937	Mycobacterium phage Aragog, complete genome	23265-23296	9	0.719
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	MN586062	Mycobacterium phage Lev2, complete genome	22978-23009	9	0.719
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	NC_022973	Mycobacterium phage Conspiracy, complete genome	23065-23096	9	0.719
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	KF493882	Mycobacterium phage Jovo, complete genome	23346-23377	9	0.719
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	MG099949	Mycobacterium phage Phlorence, complete genome	23265-23296	9	0.719
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	MG099944	Mycobacterium phage ForGetIt, complete genome	23090-23121	9	0.719
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	MG099934	Mycobacterium phage AgentM, complete genome	23235-23266	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	156749-156780	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	159524-159555	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	224286-224317	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	1520336-1520367	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1567720-1567751	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1406776-1406807	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	231927-231958	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	151581-151612	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1523273-1523304	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	1463499-1463530	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	1072888-1072919	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	691617-691648	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	56328-56359	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1578479-1578510	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	366517-366548	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	154113-154144	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	156749-156780	9	0.719
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP047657	Paraglaciecola mesophila strain GPM4 plasmid unnamed	87097-87128	9	0.719
NC_013851_3	3.13\|757538\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757538-757569	32	JQ680366	Unidentified phage clone 2200_scaffold2352 genomic sequence	8334-8365	9	0.719
NC_013851_3	3.14\|757599\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757599-757630	32	NZ_CP012710	Psychrobacter urativorans strain R310.10B plasmid 4, complete sequence	4439-4470	9	0.719
NC_013851_3	3.14\|757599\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757599-757630	32	NZ_CP012710	Psychrobacter urativorans strain R310.10B plasmid 4, complete sequence	12548-12579	9	0.719
NC_013851_3	3.14\|757599\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757599-757630	32	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	370251-370282	9	0.719
NC_013851_3	3.14\|757599\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757599-757630	32	MN855825	Bacteriophage sp. isolate 166, complete genome	2053-2084	9	0.719
NC_013851_3	3.15\|757660\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757660-757691	32	NC_009806	Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence	51765-51796	9	0.719
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NC_007766	Rhizobium etli CFN 42 plasmid p42f, complete sequence	76041-76072	9	0.719
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	74057-74088	9	0.719
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP027299	Streptomyces sp. SGAir0924 plasmid unnamed_5	120599-120630	9	0.719
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	365435-365466	9	0.719
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP013746	Arthrobacter alpinus strain A3 plasmid unnamed, complete sequence	164113-164144	9	0.719
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP024583	Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence	104735-104766	9	0.719
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	623183-623214	9	0.719
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP013345	Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence	175648-175679	9	0.719
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NC_010627	Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence	424002-424033	9	0.719
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2293858-2293889	9	0.719
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	MN586020	Microbacterium phage Megan, complete genome	50550-50581	9	0.719
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NC_030937	Xanthomonas phage f30-Xaj, complete genome	32682-32713	9	0.719
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NC_030928	Xanthomonas phage f20-Xaj, complete genome	2571-2602	9	0.719
NC_013851_3	3.20\|757965\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757965-757996	32	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	292792-292823	9	0.719
NC_013851_3	3.23\|758148\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758148-758179	32	KR072689	Paracoccus phage Shpa, complete genome	6007-6038	9	0.719
NC_013851_3	3.24\|758209\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758209-758240	32	NZ_CP026206	Escherichia coli strain ECONIH5 plasmid pECO-cbb3, complete sequence	157671-157702	9	0.719
NC_013851_3	3.27\|758393\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758393-758424	32	NZ_CP035511	Haematobacter massiliensis strain OT1 plasmid pOT1-1, complete sequence	124400-124431	9	0.719
NC_013851_3	3.32\|758698\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758698-758729	32	NZ_CP015523	Sphingomonas sp. NIC1 plasmid unnamed2, complete sequence	10936-10967	9	0.719
NC_013851_3	3.33\|758759\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758759-758790	32	NZ_CP022220	Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence	518960-518991	9	0.719
NC_013851_3	3.33\|758759\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758759-758790	32	NC_011892	Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence	459102-459133	9	0.719
NC_013851_3	3.33\|758759\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758759-758790	32	NZ_CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	129108-129139	9	0.719
NC_013851_3	3.33\|758759\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758759-758790	32	NZ_CP030054	Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence	311357-311388	9	0.719
NC_013851_3	3.37\|759003\|32\|NC_013851\|CRISPRCasFinder,CRT	759003-759034	32	NC_012809	Methylorubrum extorquens AM1 plasmid p2META1, complete sequence	13614-13645	9	0.719
NC_013851_3	3.37\|759003\|32\|NC_013851\|CRISPRCasFinder,CRT	759003-759034	32	NC_012809	Methylorubrum extorquens AM1 plasmid p2META1, complete sequence	35355-35386	9	0.719
NC_013851_3	3.37\|759003\|32\|NC_013851\|CRISPRCasFinder,CRT	759003-759034	32	NZ_CP017427	Methylobacterium sp. XJLW plasmid unnamed1, complete sequence	144199-144230	9	0.719
NC_013851_3	3.41\|759247\|32\|NC_013851\|CRISPRCasFinder,CRT	759247-759278	32	NZ_CP017422	Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence	206457-206488	9	0.719
NC_013851_3	3.41\|759247\|32\|NC_013851\|CRISPRCasFinder,CRT	759247-759278	32	NC_021229	Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919	67304-67335	9	0.719
NC_013851_3	3.44\|759430\|32\|NC_013851\|CRISPRCasFinder,CRT	759430-759461	32	NZ_CP029359	Azospirillum sp. CFH 70021 plasmid unnamed4	166087-166118	9	0.719
NC_013851_3	3.44\|759430\|32\|NC_013851\|CRISPRCasFinder,CRT	759430-759461	32	NZ_CP022306	Thalassococcus sp. S3 plasmid pS3C, complete sequence	41122-41153	9	0.719
NC_013851_3	3.46\|759552\|32\|NC_013851\|CRISPRCasFinder,CRT	759552-759583	32	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	733579-733610	9	0.719
NC_013851_3	3.46\|759552\|32\|NC_013851\|CRISPRCasFinder,CRT	759552-759583	32	NZ_CP051294	Mesorhizobium sp. NZP2077 plasmid pMSNZP2077A, complete sequence	344513-344544	9	0.719
NC_013851_3	3.46\|759552\|32\|NC_013851\|CRISPRCasFinder,CRT	759552-759583	32	NZ_CP033363	Mesorhizobium sp. NZP2077 plasmid pMSNZP2077NSa, complete sequence	344500-344531	9	0.719
NC_013851_3	3.48\|759674\|32\|NC_013851\|CRISPRCasFinder,CRT	759674-759705	32	NC_012853	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132503, complete sequence	396505-396536	9	0.719
NC_013851_3	3.48\|759674\|32\|NC_013851\|CRISPRCasFinder,CRT	759674-759705	32	NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	253943-253974	9	0.719
NC_013851_3	3.50\|759796\|32\|NC_013851\|CRISPRCasFinder,CRT	759796-759827	32	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	221342-221373	9	0.719
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP025015	Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence	272144-272175	9	0.719
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1254562-1254593	9	0.719
NC_013851_3	3.59\|760345\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760345-760376	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	825800-825831	9	0.719
NC_013851_3	3.60\|760406\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760406-760437	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1079246-1079277	9	0.719
NC_013851_3	3.60\|760406\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760406-760437	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	733879-733910	9	0.719
NC_013851_3	3.67\|760833\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760833-760864	32	NZ_CP029362	Streptomyces globisporus strain TFH56 plasmid pTFSG1, complete sequence	35182-35213	9	0.719
NC_013851_3	3.67\|760833\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760833-760864	32	NZ_CP013739	Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence	85892-85923	9	0.719
NC_013851_3	3.71\|761077\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761077-761108	32	NC_013193	Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmid pAph01, complete sequence	25652-25683	9	0.719
NC_013851_3	3.71\|761077\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761077-761108	32	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	28583-28614	9	0.719
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	NZ_CP006371	Aureimonas sp. AU20 plasmid pAU20d, complete sequence	81845-81876	9	0.719
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	NC_011885	Cyanothece sp. PCC 7425 plasmid pP742502, complete sequence	160573-160604	9	0.719
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	MF668280	Mycobacterium phage Phabba, complete genome	148208-148239	9	0.719
NC_013851_3	3.76\|761383\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761383-761414	32	NZ_CP003988	Streptomyces sp. 769 plasmid pSGZL, complete sequence	49700-49731	9	0.719
NC_013851_3	3.83\|761810\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761810-761841	32	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	566722-566753	9	0.719
NC_013851_3	3.83\|761810\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761810-761841	32	NC_023606	Mycobacterium phage CRB1, complete genome	26345-26376	9	0.719
NC_013851_3	3.84\|761871\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761871-761902	32	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	547559-547590	9	0.719
NC_013851_3	3.2\|756867\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	756867-756898	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	521590-521621	10	0.688
NC_013851_3	3.2\|756867\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	756867-756898	32	NZ_AP014570	Serpentinomonas mccroryi strain B1 plasmid pSMB1, complete sequence	9833-9864	10	0.688
NC_013851_3	3.2\|756867\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	756867-756898	32	NC_002682	Mesorhizobium japonicum MAFF 303099 plasmid pMLb, complete sequence	17872-17903	10	0.688
NC_013851_3	3.9\|757294\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757294-757325	32	NC_019894	Singulisphaera acidiphila DSM 18658 plasmid pSINAC02, complete sequence	27403-27434	10	0.688
NC_013851_3	3.10\|757355\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757355-757386	32	MN018232	Synechococcus phage S-B43, complete genome	205152-205183	10	0.688
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP015165	Acetobacter ascendens strain LMG 1590 plasmid unnamed1, complete sequence	30204-30235	10	0.688
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP022999	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence	1212956-1212987	10	0.688
NC_013851_3	3.12\|757477\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757477-757508	32	NZ_CP021512	Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-3, complete sequence	234746-234777	10	0.688
NC_013851_3	3.15\|757660\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757660-757691	32	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1644267-1644298	10	0.688
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	505298-505329	10	0.688
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	541922-541953	10	0.688
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	706962-706993	10	0.688
NC_013851_3	3.16\|757721\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757721-757752	32	MH271302	Gordonia phage Margaret, complete genome	34956-34987	10	0.688
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	548289-548320	10	0.688
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	509734-509765	10	0.688
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	218460-218491	10	0.688
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1768799-1768830	10	0.688
NC_013851_3	3.26\|758332\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758332-758363	32	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	192043-192074	10	0.688
NC_013851_3	3.27\|758393\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758393-758424	32	NZ_CP022542	Antarctobacter heliothermus strain SMS3 plasmid pSMS3-2, complete sequence	30741-30772	10	0.688
NC_013851_3	3.27\|758393\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758393-758424	32	NC_004319	Corynebacterium efficiens YS-314 plasmid pCE2, complete sequence	8595-8626	10	0.688
NC_013851_3	3.27\|758393\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758393-758424	32	NC_004808	Streptomyces rochei plasmid pSLA2-L DNA, complete sequence	68223-68254	10	0.688
NC_013851_3	3.30\|758576\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758576-758607	32	NC_020292	Clostridium saccharoperbutylacetonicum N1-4(HMT) plasmid Csp_135p, complete sequence	126907-126938	10	0.688
NC_013851_3	3.37\|759003\|32\|NC_013851\|CRISPRCasFinder,CRT	759003-759034	32	NZ_CP039640	Azospirillum sp. TSH100 plasmid p1, complete sequence	66455-66486	10	0.688
NC_013851_3	3.42\|759308\|32\|NC_013851\|CRISPRCasFinder,CRT	759308-759339	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	141618-141649	10	0.688
NC_013851_3	3.42\|759308\|32\|NC_013851\|CRISPRCasFinder,CRT	759308-759339	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	818628-818659	10	0.688
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP049040	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_3, complete sequence	35021-35052	10	0.688
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP049042	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_5, complete sequence	81872-81903	10	0.688
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NZ_CP050089	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence	139170-139201	10	0.688
NC_013851_3	3.55\|760101\|32\|NC_013851\|CRISPRCasFinder,CRT	760101-760132	32	NC_048733	Microbacterium phage Burro, complete genome	7849-7880	10	0.688
NC_013851_3	3.58\|760284\|32\|NC_013851\|CRISPRCasFinder,CRT	760284-760315	32	NC_048139	Streptomyces phage Hiyaa, complete genome	3232-3263	10	0.688
NC_013851_3	3.59\|760345\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760345-760376	32	NZ_CP027240	Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed2, complete sequence	26732-26763	10	0.688
NC_013851_3	3.59\|760345\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760345-760376	32	NZ_CP046569	Dietzia sp. DQ12-45-1b plasmid pII, complete sequence	1352-1383	10	0.688
NC_013851_3	3.61\|760467\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760467-760498	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	650978-651009	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP030325	Staphylococcus aureus strain AR_474 plasmid unnamed1, complete sequence	7536-7567	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP041740	Enterococcus faecalis EnGen0107 strain B594 plasmid p2, complete sequence	15190-15221	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030382	Staphylococcus aureus strain ER03761.3 plasmid unnamed1, complete sequence	9799-9830	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030491	Staphylococcus aureus strain ER02837.3 plasmid unnamed1, complete sequence	9799-9830	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP003674	Staphylococcus warneri SG1 plasmid clone pvSw5 genomic sequence	8573-8604	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030388	Staphylococcus aureus strain ER01062.3 plasmid unnamed2, complete sequence	41819-41850	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030497	Staphylococcus aureus strain ER02658.3 plasmid unnamed1, complete sequence	41272-41303	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_010419	Staphylococcus aureus plasmid pTZ2162, complete sequence	25103-25134	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_005054	Staphylococcus aureus plasmid pLW043, complete sequence	25572-25603	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030554	Staphylococcus aureus strain PS00003.3 plasmid unnamed1, complete sequence	9799-9830	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_002774	Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence	16500-16531	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP027419	Staphylococcus cohnii strain FDAARGOS_334 plasmid unnamed2, complete sequence	27217-27248	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030614	Staphylococcus aureus strain ER01560.3 plasmid unnamed1, complete sequence	17453-17484	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_013338	Staphylococcus aureus plasmid SAP068A, complete sequence	22661-22692	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030618	Staphylococcus aureus strain ER04440.3 plasmid unnamed1, complete sequence	9799-9830	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_AP020314	Staphylococcus aureus strain KUH140046 plasmid p01KUH140046, complete sequence	20480-20511	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030671	Staphylococcus aureus strain ER00951.3 plasmid unnamed2, complete sequence	29263-29294	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP035293	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed2, complete sequence	19289-19320	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_012547	Staphylococcus aureus plasmid pGO1, complete sequence	44639-44670	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030622	Staphylococcus aureus strain ER01524.3 plasmid unnamed2, complete sequence	5523-5554	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_005024	Staphylococcus aureus plasmid pSK41, complete sequence	44637-44668	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_013320	Staphylococcus aureus plasmid SAP014A, complete sequence	4282-4313	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_013342	Staphylococcus aureus plasmid SAP079A, complete sequence	2208-2239	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_013344	Staphylococcus aureus plasmid SAP082A, complete sequence	32771-32802	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030538	Staphylococcus aureus strain ER02094.3 plasmid unnamed2, complete sequence	9894-9925	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030639	Staphylococcus aureus strain ER04165.3 plasmid unnamed1, complete sequence	9799-9830	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_AP020325	Staphylococcus aureus strain KUN1163 plasmid p01KUN1163, complete sequence	9878-9909	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_AP020319	Staphylococcus aureus strain KUH180038 plasmid p01KUH180038, complete sequence	9878-9909	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030435	Staphylococcus aureus strain ER00610.3 plasmid unnamed2, complete sequence	16846-16877	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP031278	Staphylococcus hominis strain 19A plasmid unnamed1, complete sequence	2875-2906	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP031278	Staphylococcus hominis strain 19A plasmid unnamed1, complete sequence	10539-10570	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP054005	Staphylococcus hominis strain FDAARGOS_762 plasmid unnamed1, complete sequence	5402-5433	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP051648	Staphylococcus caprae strain SY333 plasmid pSY333-45, complete sequence	37307-37338	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030677	Staphylococcus aureus strain ER01533.3 plasmid unnamed3, complete sequence	9719-9750	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_AP020321	Staphylococcus aureus strain KUH180062 plasmid p01KUH180062, complete sequence	9876-9907	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP029674	Staphylococcus aureus strain AR_0219 plasmid unnamed1, complete sequence	16622-16653	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_AP017321	Staphylococcus aureus strain MI plasmid pMI, complete sequence	10831-10862	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	AP012550	Staphylococcus aureus plasmid pN315G DNA, complete sequence, strain: N315G	41314-41345	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP026963	Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1	47971-48002	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030429	Staphylococcus aureus strain ER03760.3 plasmid unnamed1, complete sequence	9800-9831	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030648	Staphylococcus aureus strain ER03556.3 plasmid unnamed1, complete sequence	9798-9829	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP031887	Staphylococcus aureus strain CFSAN082783 plasmid pMRSA_24, complete sequence	33274-33305	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030407	Staphylococcus aureus strain PS00002.3 plasmid unnamed1, complete sequence	9797-9828	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP054578	Staphylococcus saprophyticus strain UTI-050 plasmid pUTI-050-3, complete sequence	15122-15153	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP016854	Staphylococcus aureus subsp. aureus strain 5118.N plasmid p5118.Nb, complete sequence	43247-43278	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030678	Staphylococcus aureus strain ER00573.3 plasmid unnamed1, complete sequence	25648-25679	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP014130	Staphylococcus epidermidis strain FDAARGOS_161 plasmid unnamed1, complete sequence	17160-17191	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_013372	Staphylococcus epidermidis plasmid SAP016A, complete sequence	10724-10755	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_009619	Staphylococcus aureus subsp. aureus JH1 plasmid pSJH101, complete sequence	17619-17650	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_CP034113	Staphylococcus epidermidis strain CDC120 plasmid pSTA492, complete sequence	8135-8166	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NZ_MH587578	Staphylococcus aureus strain WG1647 plasmid pWBG615, complete sequence	28083-28114	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030591	Staphylococcus aureus strain ER02989.3 plasmid unnamed1, complete sequence	21928-21959	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	NC_009477	Staphylococcus aureus subsp. aureus JH9 plasmid pSJH901, complete sequence	1999-2030	10	0.688
NC_013851_3	3.65\|760711\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	760711-760742	32	CP030453	Staphylococcus aureus strain PS00001.3 plasmid unnamed1, complete sequence	9798-9829	10	0.688
NC_013851_3	3.71\|761077\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761077-761108	32	NC_013207	Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 plasmid pAACI02, complete sequence	69855-69886	10	0.688
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	NZ_CP031600	Roseovarius indicus strain DSM 26383 plasmid pRIdsm_02, complete sequence	30810-30841	10	0.688
NC_013851_3	3.75\|761322\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761322-761353	32	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	439042-439073	10	0.688
NC_013851_3	3.76\|761383\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761383-761414	32	NZ_CP012575	Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence	33957-33988	10	0.688
NC_013851_3	3.76\|761383\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761383-761414	32	CP048046	Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence	33500-33531	10	0.688
NC_013851_3	3.76\|761383\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761383-761414	32	NZ_CP048050	Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence	120402-120433	10	0.688
NC_013851_3	3.76\|761383\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761383-761414	32	NZ_CP048048	Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence	126459-126490	10	0.688
NC_013851_3	3.76\|761383\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761383-761414	32	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	472950-472981	10	0.688
NC_013851_3	3.76\|761383\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761383-761414	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1831241-1831272	10	0.688
NC_013851_3	3.77\|761444\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761444-761475	32	MK814752	Gordonia phage Lutum, complete genome	16984-17015	10	0.688
NC_013851_3	3.77\|761444\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761444-761475	32	MH779504	Gordonia phage Getalong, complete genome	17781-17812	10	0.688
NC_013851_3	3.77\|761444\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761444-761475	32	MH651185	Gordonia phage Phistory, complete genome	17756-17787	10	0.688
NC_013851_3	3.77\|761444\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761444-761475	32	MK376961	Gordonia phage Asapag, complete genome	16984-17015	10	0.688
NC_013851_3	3.77\|761444\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761444-761475	32	NC_048141	Gordonia phage Kenna, complete genome	16984-17015	10	0.688
NC_013851_3	3.77\|761444\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761444-761475	32	MH651176	Gordonia phage Horus, complete genome	16990-17021	10	0.688
NC_013851_3	3.77\|761444\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761444-761475	32	NC_048018	Gordonia phage Apricot, complete genome	16526-16557	10	0.688
NC_013851_3	3.77\|761444\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761444-761475	32	MK937597	Gordonia phage Spooky, complete genome	16965-16996	10	0.688
NC_013851_3	3.77\|761444\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761444-761475	32	NC_047891	Gordonia phage BENtherdunthat, complete genome	16984-17015	10	0.688
NC_013851_3	3.84\|761871\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761871-761902	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1426013-1426044	10	0.688
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NZ_CP022999	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence	146628-146659	11	0.656
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	MN586053	Arthrobacter phage BeatusComedenti, complete genome	24662-24693	11	0.656
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NC_031254	Arthrobacter phage Kitkat, complete genome	24782-24813	11	0.656
NC_013851_3	3.17\|757782\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	757782-757813	32	NC_031231	Arthrobacter phage KellEzio, complete genome	24664-24695	11	0.656
NC_013851_3	3.31\|758637\|32\|NC_013851\|PILER-CR,CRISPRCasFinder,CRT	758637-758668	32	KY709687	Salmonella phage 29485, complete genome	16051-16082	11	0.656
NC_013851_3	3.44\|759430\|32\|NC_013851\|CRISPRCasFinder,CRT	759430-759461	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	229469-229500	11	0.656
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	NZ_AP014639	Leptolyngbya boryana IAM M-101 plasmid pLBA	23366-23397	11	0.656
NC_013851_3	3.73\|761199\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761199-761230	32	NC_020543	Sphingomonas sp. MM-1 plasmid pISP2, complete sequence	10503-10534	11	0.656
NC_013851_3	3.79\|761566\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761566-761597	32	NZ_CP007510	Pseudomonas stutzeri strain 19SMN4 plasmid pLIB119, complete plasmid	3798-3829	11	0.656
NC_013851_3	3.79\|761566\|32\|NC_013851\|CRISPRCasFinder,CRT,PILER-CR	761566-761597	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	941940-941971	11	0.656

1. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 5, identity: 0.844

gcggcat-cggtgccgtagccggcctccagcgc	CRISPR spacer
-cggcgtccggggccgaagccggcctccagcga	Protospacer
 ****.* *** **** ***************

2. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 5, identity: 0.844

--gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
cggcggc--cggcgccgaagccggcctccagcga	Protospacer
  *****  ***.**** ***************

3. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

--gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
cggcggc--cggggccgaagccggcctccagcga	Protospacer
  *****  *** **** ***************

4. spacer 3.71|761077|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to KY087993 (Mycobacterium phage Hammy, complete genome) position: , mismatch: 5, identity: 0.844

-ggcagcgagttcctcgacgagatggtgcgcac	CRISPR spacer
gggcag-gaggccctcgacgagatggtgcgccg	Protospacer
 ***** *** .*******************

5. spacer 3.71|761077|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MF140398 (Mycobacterium phage Amohnition, complete genome) position: , mismatch: 5, identity: 0.844

-ggcagcgagttcctcgacgagatggtgcgcac	CRISPR spacer
gggcag-gaggccctcgacgagatggtgcgccg	Protospacer
 ***** *** .*******************

6. spacer 3.71|761077|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MF140406 (Mycobacterium phage DarthP, complete genome) position: , mismatch: 5, identity: 0.844

-ggcagcgagttcctcgacgagatggtgcgcac	CRISPR spacer
gggcag-gaggccctcgacgagatggtgcgccg	Protospacer
 ***** *** .*******************

7. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to CP003950 (Rhodococcus opacus PD630 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.812

gcggcatcggtgccgtagccggcctc-cagcgc	CRISPR spacer
ccggcgtcggtgccgtacccggcctcgcggca-	Protospacer
 ****.*********** ******** *.**.

8. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

----gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
ttgcgctgc----gtgccgtagtcggcctccagcgc	Protospacer
    ** **    *********.*************

9. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.812

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
gcggtggtggtgccgtcgccggcccccagcgc	Protospacer
****.. .******** *******.*******

10. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.812

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
gcggtggtggtgccgtcgccggcccccagcgc	Protospacer
****.. .******** *******.*******

11. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 6, identity: 0.812

gacatc-acgccgccgatctgcgtgccgtcgag	CRISPR spacer
-tcgtcgacgccgccgaccggcgtgccgtcgat	Protospacer
  *.** **********.* ************

12. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 6, identity: 0.812

gacatc-acgccgccgatctgcgtgccgtcgag	CRISPR spacer
-gcaccaaggccgccgatctgcgggccggcgag	Protospacer
 .**.* * ************** **** ****

13. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039694 (Agrobacterium larrymoorei strain CFBP5473 plasmid pTiCFBP5473, complete sequence) position: , mismatch: 6, identity: 0.812

gacatcacgccgccgatctgcgt---gccgtcgag	CRISPR spacer
gacatcacgccccagatctgcgttagtccgtc---	Protospacer
*********** * *********    *****

14. spacer 3.46|759552|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP034302 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-3, complete sequence) position: , mismatch: 6, identity: 0.812

gcgataaagcgcttgttcgcgctgttcgatac-	CRISPR spacer
ggtatcaagagcttgttcgcgctgtt-gatgct	Protospacer
*  ** *** **************** ***.*

15. spacer 3.52|759918|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP017942 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.812

gtatttgatgcggtcgaatacctattcaataa	CRISPR spacer
ggatttgaagcggtcgaataccttttccctta	Protospacer
* ****** ************** ***  * *

16. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to MF668280 (Mycobacterium phage Phabba, complete genome) position: , mismatch: 6, identity: 0.812

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtaggtctcctcgtcgagacccttgtcggt	Protospacer
*********** ************  .**  *

17. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NC_011273 (Mycobacterium phage Myrna, complete genome) position: , mismatch: 6, identity: 0.812

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtaggtctcctcgtcgagacccttgtcggt	Protospacer
*********** ************  .**  *

18. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 6, identity: 0.812

-cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
tcggca-gtctcgtcgtcgaggccctgatccgc	Protospacer
 ***.* **************.*** ***** .

19. spacer 3.60|760406|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016891 (Pantoea agglomerans strain C410P1 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

gctgaatccccggatgatggggcgcg-ggtcgc	CRISPR spacer
gatgaatccccggatgagggggcccgtgagcg-	Protospacer
* *************** ***** ** *. **

20. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009123 (Sphingopyxis fribergensis strain Kp5.2 plasmid pSfKp5.2, complete sequence) position: , mismatch: 6, identity: 0.812

tcgagcaaccgcagcgcgttcggga--actgcgt	CRISPR spacer
gcgagcaaccgcagcgcgttcgcgacgacgac--	Protospacer
 ********************* **  ** .*

21. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025426 (Enterococcus faecium strain SC4 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

22. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to LT603679 (Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 2) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

23. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040369 (Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

24. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043485 (Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

25. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020485 (Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

26. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

27. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

28. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027498 (Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

29. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027507 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

30. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

31. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR135236 (Enterococcus faecium isolate E7067 plasmid 2) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

32. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019209 (Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

33. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR135429 (Enterococcus faecium isolate E8927 plasmid 2) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

34. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

35. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR135220 (Enterococcus faecium isolate E7040 plasmid 2) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

36. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

37. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR135352 (Enterococcus faecium isolate E8014 plasmid 2) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

38. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134106 (Enterococcus faecium isolate E6043 plasmid 2) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

39. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011829 (Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

40. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045013 (Enterococcus faecium strain LAC7.2 plasmid pI, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

41. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

42. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040741 (Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

43. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040877 (Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

44. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019993 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

45. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

46. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035137 (Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

47. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

48. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

49. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

50. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035221 (Enterococcus faecium strain SRCM103470 plasmid unnamed1) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

51. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to LR135186 (Enterococcus faecium isolate E4413 genome assembly, plasmid: 2) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

52. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042833 (Enterococcus faecium strain FA3 plasmid unnamed1) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

53. spacer 3.80|761627|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG674581 (Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtatctatctgagtaggtgttccaatgaac	CRISPR spacer
ttgtatatttctgagtaggtgttccattataa	Protospacer
****** * ***************** *. *

54. spacer 3.5|757050|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023740 (Methylosinus trichosporium OB3b plasmid pOB3b3, complete sequence) position: , mismatch: 7, identity: 0.781

ggaaccaagatcctccgtgacgcggaccccga	CRISPR spacer
cgcgccaagatcctccgcgacgcggagccggt	Protospacer
 * .*************.******** ** *

55. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
ttcagcgcggccttgaacgcatcgttgttgac	Protospacer
**********.********* ***    ***.

56. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029835 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
acgctgtcgttgccgtcgccggcctccagcgt	Protospacer
.** ..*** ****** **************.

57. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcctccagcgc----	CRISPR spacer
gcggcatcgctgccgcagccgg----cggcgcaatc	Protospacer
********* *****.******    *.****

58. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
acgctgtcgttgccgtcgccggcctccagcgt	Protospacer
.** ..*** ****** **************.

59. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
atggtgtcgttgccgtcgccggcctccagcgt	Protospacer
..**..*** ****** **************.

60. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
atggtgtcgttgccgtcgccggcctccagcgt	Protospacer
..**..*** ****** **************.

61. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039640 (Azospirillum sp. TSH100 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
accgtgtcgttgccgtcgccggcctccagcgt	Protospacer
.* *..*** ****** **************.

62. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcctccagcgc----	CRISPR spacer
tcggcatcggtgccgaagcccgcc----gcgccgcc	Protospacer
 ************** **** ***    ****

63. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcctccagcgc----	CRISPR spacer
tcggcatcggtgccgaagcccgcc----gcgccgcc	Protospacer
 ************** **** ***    ****

64. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcct-ccagcgc	CRISPR spacer
atgacataggtgccgtcgccggcctcccggcg-	Protospacer
..*.*** ******** ******** **.***

65. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcct-ccagcgc	CRISPR spacer
atgacataggtgccgtcgccggcctcccggcg-	Protospacer
..*.*** ******** ******** **.***

66. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcatcggtgccgtagccggcct-ccagcgc	CRISPR spacer
atgacataggtgccgtcgccggcctcccggcg-	Protospacer
..*.*** ******** ******** **.***

67. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023740 (Methylosinus trichosporium OB3b plasmid pOB3b3, complete sequence) position: , mismatch: 7, identity: 0.781

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
ggcggcgcgccgccgatgtgcgcgccgtcgcg	Protospacer
*.*. *.********** ****.******* *

68. spacer 3.27|758393|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

gcgagcggtgcgcgggtgccggt--cttggtcgc	CRISPR spacer
gcgagcggtgcgccggtgacggtggagcggtc--	Protospacer
************* **** ****    .****

69. spacer 3.30|758576|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MW057859 (Providencia phage PSTCR8lys, complete genome) position: , mismatch: 7, identity: 0.781

gaggtattcattcatttttgaatcgatctgac	CRISPR spacer
taggtaatcactcatttttgaatcattcagcc	Protospacer
 ***** ***.*************. ** * *

70. spacer 3.32|758698|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042181 (Pseudomonas sp. KBS0802 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ttgttcgcggccctgctcaagaatgcgggcca	CRISPR spacer
gtgttcgccgacctgctcaagaatgttgccaa	Protospacer
 ******* * **************. * * *

71. spacer 3.32|758698|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_003350 (Pseudomonas putida plasmid pWW0, complete sequence) position: , mismatch: 7, identity: 0.781

ttgttcgcggccctgctcaagaatgcgggcca	CRISPR spacer
gtgttcgccgacctgctcaagaatgttgccaa	Protospacer
 ******* * **************. * * *

72. spacer 3.35|758881|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781

agccgtctgctgggcctgggcggtctcagggg	CRISPR spacer
gggcgcctgctgggcctgggcggtctgctgcg	Protospacer
.* **.********************   * *

73. spacer 3.41|759247|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 7, identity: 0.781

----tcctgttcctcgtggctggcgatggctgtggc	CRISPR spacer
atgatcttgtcc----tggctggcgatggctttggc	Protospacer
    **.***.*    *************** ****

74. spacer 3.41|759247|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 7, identity: 0.781

----tcctgttcctcgtggctggcgatggctgtggc	CRISPR spacer
atgatcttgtcc----tggctggcgatggctttggc	Protospacer
    **.***.*    *************** ****

75. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP051472 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10C, complete sequence) position: , mismatch: 7, identity: 0.781

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtaggtctcggcgtcgagacccatcacgaa	Protospacer
************ ************   *

76. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP012965 (Rhodobacter sphaeroides strain MBTLJ-8 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtaggtctcggcgtcgagacccatcacgaa	Protospacer
************ ************   *

77. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP030275 (Rhodobacter sphaeroides 2.4.1 plasmid pC, complete sequence) position: , mismatch: 7, identity: 0.781

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtaggtctcggcgtcgagacccatcacgaa	Protospacer
************ ************   *

78. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to CP047035 (Rhodobacter sphaeroides strain DSM 158 plasmid pC, complete sequence) position: , mismatch: 7, identity: 0.781

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtaggtctcggcgtcgagacccatcacgaa	Protospacer
************ ************   *

79. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP015292 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid d, complete sequence) position: , mismatch: 7, identity: 0.781

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtaggtctcggcgtcgagacccatcacgaa	Protospacer
************ ************   *

80. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP047041 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pC, complete sequence) position: , mismatch: 7, identity: 0.781

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtaggtctcggcgtcgagacccatcacgaa	Protospacer
************ ************   *

81. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP015214 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid c, complete sequence) position: , mismatch: 7, identity: 0.781

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtaggtctcggcgtcgagacccatcacgaa	Protospacer
************ ************   *

82. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to MN234185 (Mycobacterium phage Lemuria, complete genome) position: , mismatch: 7, identity: 0.781

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtaggtcgcgtcgtcgacaccctggttcgc	Protospacer
********* ********* **** *.*.* .

83. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

cggta-ggtctcgtcgtcgagacccagatcctt	CRISPR spacer
-ggcatcgcctcgtcgtcgagcgccagatcctc	Protospacer
 **.*  *.************  *********.

84. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.781

cggta-ggtctcgtcgtcgagacccagatcctt	CRISPR spacer
-ggcatcgcctcgtcgtcgagcgccagatcctc	Protospacer
 **.*  *.************  *********.

85. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.781

cggta-ggtctcgtcgtcgagacccagatcctt	CRISPR spacer
-ggcattgcctcgtcgtcgagcgccagatcctc	Protospacer
 **.*  *.************  *********.

86. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

cggta-ggtctcgtcgtcgagacccagatcctt	CRISPR spacer
-ggcatcgcctcgtcgtcgagcgccagatcctc	Protospacer
 **.*  *.************  *********.

87. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

cggta-ggtctcgtcgtcgagacccagatcctt	CRISPR spacer
-ggcatcgcctcgtcgtcgagcgccagatcctc	Protospacer
 **.*  *.************  *********.

88. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.781

cggta-ggtctcgtcgtcgagacccagatcctt	CRISPR spacer
-ggcatcgcctcgtcgtcgagcgccagatcctc	Protospacer
 **.*  *.************  *********.

89. spacer 3.60|760406|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MH019216 (Streptomyces phage Wentworth, complete genome) position: , mismatch: 7, identity: 0.781

gctgaatccccggatgatggggcgcgggtcgc	CRISPR spacer
cctgaatccacggatgatggcgcgcgggatca	Protospacer
 ******** ********** ******* .

90. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024924 (Sphingomonas sp. Cra20 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

tcgagcaaccgcagcgcgttcgggaactgcgt	CRISPR spacer
tcgaggaaccgcatcgcgttcgggacccaggc	Protospacer
***** ******* *********** *.. *.

91. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134450 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence) position: , mismatch: 7, identity: 0.781

tcgagcaaccgcagcgcgttcgggaactgcgt----	CRISPR spacer
tcgagcacccacagcgcgttcggaa----cgtcgag	Protospacer
******* **.************.*    ***

92. spacer 3.76|761383|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 7, identity: 0.781

cggagcaa-ggccgcagtagccgcgacggcgag	CRISPR spacer
-atggcaaccgccgcagtagccgcggcggtgag	Protospacer
 . .****  ***************.***.***

93. spacer 3.76|761383|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MK059749 (Mycobacterium phage CRB2, complete genome) position: , mismatch: 7, identity: 0.781

cggagcaag---gccgcagtagccgcgacggcgag	CRISPR spacer
---ggccagccagcggcagtagccgcgtcggcgag	Protospacer
   .** **   ** ************ *******

94. spacer 3.83|761810|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgtcagccgctccgcgatggctagtccagg--	CRISPR spacer
agcgtcaggcgctgcgcgatggc--gcgcgggtc	Protospacer
******** **** *********  *. *.**

95. spacer 3.84|761871|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_014159 (Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence) position: , mismatch: 7, identity: 0.781

gcgccgggcgtgcgatcgatctcgtcaaatat	CRISPR spacer
gcgccgggcgcgcgatcgacctcgtcgtgcac	Protospacer
**********.********.******. ..*.

96. spacer 3.84|761871|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

gcgccgggcgtgcgatcgatctcgtcaaatat	CRISPR spacer
cggccggtcgtgcgctcgatctcgtcgaggat	Protospacer
  ***** ****** ***********.*. **

97. spacer 3.84|761871|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029776 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

gcgccgggcgtgcgatcgatctcgtcaaatat-	CRISPR spacer
gttccgggcgtgcggacgatctcgtc-catgta	Protospacer
*. ***********. **********  **.*

98. spacer 3.85|761932|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

ctccccaaaccaccgccagaagttcctcaccc	CRISPR spacer
cgacacctaccacggccagaagttcctcatcc	Protospacer
*  * *  ***** ***************.**

99. spacer 3.2|756867|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019438 (Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tgggcgtcgacgcgatcgcgccattcggtgtc	CRISPR spacer
cctgcgtcggctcgatcgcgccattccgcatc	Protospacer
.  ******.* ************** *..**

100. spacer 3.2|756867|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

tgggcgt-cgacgcgatcgcgccattcggtgtc	CRISPR spacer
-ggatgcgaaacgggatcgcgccgttcggtgtc	Protospacer
 **..*.  .*** *********.*********

101. spacer 3.2|756867|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 8, identity: 0.75

tgggcgt-cgacgcgatcgcgccattcggtgtc	CRISPR spacer
-ggatgcgaaacgggatcgcgccgttcggtgtc	Protospacer
 **..*.  .*** *********.*********

102. spacer 3.4|756989|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MK557849 (Caudovirales GX15bay, complete genome) position: , mismatch: 8, identity: 0.75

cgccaagcgcccacggtcggccacatctggaa	CRISPR spacer
atcgcatcgcccacggtcggcgacacctggat	Protospacer
  *  * ************** ***.*****

103. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MF141540 (Mycobacterium phage Avocado, complete genome) position: , mismatch: 8, identity: 0.75

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gtcaccgcggtcttgatcgcctcgaacgccgg	Protospacer
 *** *********** *********.*. .

104. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to KR080198 (Mycobacterium phage Cambiare, complete genome) position: , mismatch: 8, identity: 0.75

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gtcaccgcggtcttgatcgcctcgaacgctgg	Protospacer
 *** *********** *********.*. .

105. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 8, identity: 0.75

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gtcaccgcggtcttgatcgcctcgaacgccgg	Protospacer
 *** *********** *********.*. .

106. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011383 (Calothrix sp. 336/3 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
accagcgcgatcttgaacgcctcaaacgaaaa	Protospacer
 .*******.*************.**.* .*

107. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MN234196 (Gordonia phage CloverMinnie, complete genome) position: , mismatch: 8, identity: 0.75

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
cccagggcggtcttgatcgcctcgaaggcggg	Protospacer
..*** ********** ********* *.*.

108. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MG770214 (Gordonia phage SteveFrench, complete genome) position: , mismatch: 8, identity: 0.75

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gtcaccacggtcttgaacgcctcgacgttggg	Protospacer
 *** *.******************   **.

109. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_015498 (Glaciecola sp. 4H-3-7+YE-5 plasmid pGLAAG01, complete sequence) position: , mismatch: 8, identity: 0.75

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
ttcgacagcaagcgcttccgcttcattaaaca	Protospacer
.****************** ****    *. *

110. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 8, identity: 0.75

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
agcgaccgcaagcgcatcctcttcccgttcga	Protospacer
  **** ******** ********* *.  **

111. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 8, identity: 0.75

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
agcgaccgcaagcgcatcctcttcccgttcga	Protospacer
  **** ******** ********* *.  **

112. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030830 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750c, complete sequence) position: , mismatch: 8, identity: 0.75

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
ccctgcagcaagcgctgcctgttccagccgct	Protospacer
*.* .*********** *** ******* *

113. spacer 3.14|757599|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022357 (Paraphotobacterium marinum strain NSCS20N07D plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

ctgtgatgcgtcgttttttattcctgatttta	CRISPR spacer
atattttaagtcgatttttatttctgatttta	Protospacer
 *.*  *. **** ********.*********

114. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 8, identity: 0.75

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
agcgccccggtgccgtcggcggcctccagcgt	Protospacer
.  ** .********* * ************.

115. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014802 (Rhodovulum sulfidophilum plasmid Plasmid2 DNA, complete genome, strain: DSM 2351) position: , mismatch: 8, identity: 0.75

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
tcgcgctcggtgccctcgccggcctccagctg	Protospacer
 **   ******** * *************

116. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MH271316 (Microbacterium phage Tandem, complete genome) position: , mismatch: 8, identity: 0.75

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
tctcgatcggtgacgtatccggcctccaggac	Protospacer
 *   ******* **** *********** .*

117. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MK376963 (Microbacterium phage Alleb, complete genome) position: , mismatch: 8, identity: 0.75

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
tctcgatcggtgacgtatccggcctccaggac	Protospacer
 *   ******* **** *********** .*

118. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MH271307 (Microbacterium phage OlinDD, complete genome) position: , mismatch: 8, identity: 0.75

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
tctcgatcggtgacgtatccggcctccaggac	Protospacer
 *   ******* **** *********** .*

119. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MH271300 (Microbacterium phage Hortus1, complete genome) position: , mismatch: 8, identity: 0.75

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
tctcgatcggtgacgtatccggcctccaggac	Protospacer
 *   ******* **** *********** .*

120. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.75

-gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
cacag-gccggtgccgcagccggcgtccagcac	Protospacer
 .*.* ..********.******* ******.*

121. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcggca----tcggtgccgtagccggcctccagcgc	CRISPR spacer
----cacaatccggtgccgcagccggcatccagcac	Protospacer
    **    .********.******* ******.*

122. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 8, identity: 0.75

-gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
cacagt-ccggtgccgcagccggcatccagcac	Protospacer
 .*.*. .********.******* ******.*

123. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.75

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
gcgaacaggccgccgatcggcgtgccgtcctc	Protospacer
*  * ** ********** **********

124. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 8, identity: 0.75

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
gcgaacaggccgccgatcggcgtgccgtcctc	Protospacer
*  * ** ********** **********

125. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
gcgaacaggccgccgatcggcgtgccgtcctc	Protospacer
*  * ** ********** **********

126. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
gcgaacaggccgccgatcggcgtgccgtcctc	Protospacer
*  * ** ********** **********

127. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to JN968479 (Haloarcula hispanica icosahedral virus 2, complete genome) position: , mismatch: 8, identity: 0.75

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
gtgaccacgccgtcgatgtgcgtgccgtccgc	Protospacer
*  *.*******.**** *********** .

128. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

--gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
tcgccgt--cgccgccgatcagcgtgtcgtcgcc	Protospacer
  * *.*  *********** *****.*****

129. spacer 3.18|757843|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MK814752 (Gordonia phage Lutum, complete genome) position: , mismatch: 8, identity: 0.75

ggtctgacgaatggtttgaggcccgctgcgga	CRISPR spacer
gttcacctgagtggtatgaggcccgctgcggc	Protospacer
* **   .**.**** ***************

130. spacer 3.18|757843|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MH779504 (Gordonia phage Getalong, complete genome) position: , mismatch: 8, identity: 0.75

ggtctgacgaatggtttgaggcccgctgcgga	CRISPR spacer
gttcacctgagtggtatgaggcccgctgcggc	Protospacer
* **   .**.**** ***************

131. spacer 3.18|757843|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_048141 (Gordonia phage Kenna, complete genome) position: , mismatch: 8, identity: 0.75

ggtctgacgaatggtttgaggcccgctgcgga	CRISPR spacer
gttcacctgagtggtatgaggcccgctgcggc	Protospacer
* **   .**.**** ***************

132. spacer 3.23|758148|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MN657144 (Pedobacter sp. strain ANT_H27B plasmid pA27BH1, complete sequence) position: , mismatch: 8, identity: 0.75

aagagccagaaatcaaggcctaaatgccggtg	CRISPR spacer
caaagccagaaatcaaggcatagatgtaagtt	Protospacer
 *.**************** **.***. .**

133. spacer 3.27|758393|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 8, identity: 0.75

gcgagcggtgcgcgggtgccggtcttggtcgc	CRISPR spacer
gcgagcggtgcgcgcgtcccggtcgagccggt	Protospacer
************** ** ******  * . *.

134. spacer 3.27|758393|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 8, identity: 0.75

gcgagcggtgcgcgggtgccggtcttggtcgc	CRISPR spacer
gcgagcggtgcgcgcgtcccggtcgagccggt	Protospacer
************** ** ******  * . *.

135. spacer 3.27|758393|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 8, identity: 0.75

gcgagcggtgcgcgggtgccggtcttggtcgc	CRISPR spacer
gcgagcggtccgcggctgccggtggcggtgat	Protospacer
********* ***** *******  .*** ..

136. spacer 3.32|758698|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

ttgttcgcggccctgctcaagaatgcgggcca	CRISPR spacer
gtcctcgcggccctgttcaaggatgcgataca	Protospacer
 * .***********.*****.*****.  **

137. spacer 3.32|758698|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017625 (Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728 plasmid pShTP, complete sequence) position: , mismatch: 8, identity: 0.75

-ttgttcgcggccctgctcaagaatgcgggcca	CRISPR spacer
acagagcg-ggccctgcccaagaatacgggccc	Protospacer
 . *  ** ********.*******.******

138. spacer 3.35|758881|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MT310863 (Streptomyces phage Issmi, complete genome) position: , mismatch: 8, identity: 0.75

agccgtctgctgggcctgggcggtctcagggg	CRISPR spacer
gggaggacgctggggcggggcggtctcagggg	Protospacer
.*  *  .****** * ***************

139. spacer 3.35|758881|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 8, identity: 0.75

agccgtctgctgggcctgggcggtctcagggg	CRISPR spacer
agccgtctgctgcgcctgcgcggcccgcagcg	Protospacer
************ ***** ****.*.  .* *

140. spacer 3.35|758881|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 8, identity: 0.75

agccgtctgctgggcctgggcggtctcagggg	CRISPR spacer
agccgtctgctgcgcctgcgcggcccgcagcg	Protospacer
************ ***** ****.*.  .* *

141. spacer 3.41|759247|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP016879 (Xanthomonas hortorum strain B07-007 plasmid pB07007, complete sequence) position: , mismatch: 8, identity: 0.75

---tcctgttcctcgtggctggcgatggctgtggc	CRISPR spacer
ggggccga---ctcgttgctggccatggctgtggc	Protospacer
    ** .   ***** ****** ***********

142. spacer 3.41|759247|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP018733 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.2, complete sequence) position: , mismatch: 8, identity: 0.75

---tcctgttcctcgtggctggcgatggctgtggc	CRISPR spacer
ggggccga---ctcgttgctggccatggctgtggc	Protospacer
    ** .   ***** ****** ***********

143. spacer 3.42|759308|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP009431 (Sphingopyxis macrogoltabida strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

aacgccctacagctcgcgcggcagaacgagat	CRISPR spacer
gagctcgatcagctcgcgccgcagaacgagat	Protospacer
.*  .*   ********** ************

144. spacer 3.42|759308|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP015744 (Shinella sp. HZN7 plasmid pShin-08, complete sequence) position: , mismatch: 8, identity: 0.75

aacgccctacagctcgcgcggcagaacgagat	CRISPR spacer
cgcgggcaccagctcgcgcggcaccacgagat	Protospacer
 .**  *  **************  *******

145. spacer 3.59|760345|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ccgcccagaccgtccaggaggctcctggcggc	CRISPR spacer
ccgcgccgaccgtccaggaggctgtttccgag	Protospacer
**** * **************** .*  **.

146. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.75

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
aagaagcaattctgtctttatcatcaaagaac	Protospacer
*    *  **.*************.*******

147. spacer 3.68|760894|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MN096363 (Gordonia phage Gibbles, complete genome) position: , mismatch: 8, identity: 0.75

gcaaggtccagagcacgaaagaaattaggcgg	CRISPR spacer
gagaggtcgagagcacgaaagaaattgctcat	Protospacer
* .***** *****************.  *.

148. spacer 3.68|760894|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MH479923 (Gordonia phage RobinSparkles, complete genome) position: , mismatch: 8, identity: 0.75

gcaaggtccagagcacgaaagaaattaggcgg	CRISPR spacer
gagaggtcgagagcacgaaagaaattgctcat	Protospacer
* .***** *****************.  *.

149. spacer 3.68|760894|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to KU998254 (Gordonia phage Kampe, complete genome) position: , mismatch: 8, identity: 0.75

gcaaggtccagagcacgaaagaaattaggcgg	CRISPR spacer
gaaaagtcgagagcacgaaagaaattgctcat	Protospacer
* **.*** *****************.  *.

150. spacer 3.68|760894|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to KU998252 (Gordonia phage PatrickStar, complete genome) position: , mismatch: 8, identity: 0.75

gcaaggtccagagcacgaaagaaattaggcgg	CRISPR spacer
gaaaagtcgagagcacgaaagaaattgctcat	Protospacer
* **.*** *****************.  *.

151. spacer 3.68|760894|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_030915 (Gordonia phage Orchid, complete genome) position: , mismatch: 8, identity: 0.75

gcaaggtccagagcacgaaagaaattaggcgg	CRISPR spacer
gaaaagtcgagagcacgaaagaaattgctcat	Protospacer
* **.*** *****************.  *.

152. spacer 3.71|761077|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022191 (Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggcagcgagttcctcgacgagatggtgcgcac	CRISPR spacer
aacggcgagttcctctacgagatggcgctgtc	Protospacer
..*.*********** *********.**   *

153. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 8, identity: 0.75

tcgagcaaccgcagcgcgttcgggaactgcgt-	CRISPR spacer
gacagcatccgcagcgcgtgcgggaac-atgtc	Protospacer
   **** *********** ******* ..**

154. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_011273 (Mycobacterium phage Myrna, complete genome) position: , mismatch: 8, identity: 0.75

tcgagcaa-ccgcagcgcgttcgggaactgcgt	CRISPR spacer
-ggaccggcccgcatcgcgttctggaactgcgc	Protospacer
  ** *.. ***** ******* *********.

155. spacer 3.81|761688|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048282 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence) position: , mismatch: 8, identity: 0.75

ctgtcctgatgtcggcgactcggg--actctgaa	CRISPR spacer
ttgtcctgatgccggcgacccgggcagccctc--	Protospacer
.**********.*******.****  .*.**

156. spacer 3.83|761810|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

agcgtcagccgctccgcgatggctagtccagg	CRISPR spacer
accgccagccgctccgcgatggccagcgtcga	Protospacer
* **.******************.**. . *.

157. spacer 3.83|761810|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 8, identity: 0.75

agcgtcagccgctccgcgatggctagtccagg	CRISPR spacer
agcttcagcagctccgcgatggcctggcgcag	Protospacer
*** ***** *************. * *  .*

158. spacer 3.83|761810|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MH719194 (Pseudomonas phage Ps60, complete genome) position: , mismatch: 8, identity: 0.75

agcgtcagccgctccgcgatggctagtccagg	CRISPR spacer
tgcgtcaggcgatccgcgatggcttaaccctg	Protospacer
 ******* ** ************ . **  *

159. spacer 3.83|761810|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to JX495043 (Pseudomonas phage JBD67, partial genome) position: , mismatch: 8, identity: 0.75

agcgtcagccgctccgcgatggctagtccagg	CRISPR spacer
tgcgtcaggcgatccgcgatggcttaaccctg	Protospacer
 ******* ** ************ . **  *

160. spacer 3.83|761810|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to LN898172 (Pseudomonas phage vB_PaeS_PM105) position: , mismatch: 8, identity: 0.75

agcgtcagccgctccgcgatggctagtccagg	CRISPR spacer
tgcgtcaggcgatccgcgatggcttaaccctg	Protospacer
 ******* ** ************ . **  *

161. spacer 3.83|761810|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MN536027 (Pseudomonas phage vB_Pae-SS2019XII, complete genome) position: , mismatch: 8, identity: 0.75

agcgtcagccgctccgcgatggctagtccagg	CRISPR spacer
tgcgtcaggcgatccgcgatggcttaaccctg	Protospacer
 ******* ** ************ . **  *

162. spacer 3.84|761871|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012918 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p4, complete sequence) position: , mismatch: 8, identity: 0.75

gcgccgggcgtgcgatcgatctcgtcaaatat	CRISPR spacer
tcgccgggcgggcgatcgatctcgacacggtg	Protospacer
 ********* ************* ** .

163. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 9, identity: 0.719

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
atcagcgcggtcttcgacgcctcgaccttcga	Protospacer
 ************* .********* . * .

164. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
ttcagcgcggtctcgaccgcctccgtgccgct	Protospacer
*************.** ****** .   .* *

165. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MG099937 (Mycobacterium phage Aragog, complete genome) position: , mismatch: 9, identity: 0.719

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gccaccgcggtcttgatcgcctcgatagtttg	Protospacer
 .** *********** ********  **

166. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MN586062 (Mycobacterium phage Lev2, complete genome) position: , mismatch: 9, identity: 0.719

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gccaccgcggtcttgatcgcctcgatagtttg	Protospacer
 .** *********** ********  **

167. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_022973 (Mycobacterium phage Conspiracy, complete genome) position: , mismatch: 9, identity: 0.719

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gccaccgcggtcttgatcgcctcgatagtttg	Protospacer
 .** *********** ********  **

168. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to KF493882 (Mycobacterium phage Jovo, complete genome) position: , mismatch: 9, identity: 0.719

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gccaccgcggtcttgatcgcctcgatagtttg	Protospacer
 .** *********** ********  **

169. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MG099949 (Mycobacterium phage Phlorence, complete genome) position: , mismatch: 9, identity: 0.719

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gccaccgcggtcttgatcgcctcgatagtttg	Protospacer
 .** *********** ********  **

170. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MG099944 (Mycobacterium phage ForGetIt, complete genome) position: , mismatch: 9, identity: 0.719

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gccaccgcggtcttgatcgcctcgatagtttg	Protospacer
 .** *********** ********  **

171. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MG099934 (Mycobacterium phage AgentM, complete genome) position: , mismatch: 9, identity: 0.719

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gccaccgcggtcttgatcgcctcgatagtttg	Protospacer
 .** *********** ********  **

172. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

173. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

174. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

175. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

176. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

177. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

178. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

179. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

180. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

181. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

182. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

183. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

184. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

185. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

186. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

187. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

188. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
gcctccagcaagcgcatcctcttccggcacat	Protospacer
 .*  ********** *********.*** .

189. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047657 (Paraglaciecola mesophila strain GPM4 plasmid unnamed) position: , mismatch: 9, identity: 0.719

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
ttcaacagcaagcgcttccgcttcattaaaca	Protospacer
.**.*************** ****    *. *

190. spacer 3.13|757538|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to JQ680366 (Unidentified phage clone 2200_scaffold2352 genomic sequence) position: , mismatch: 9, identity: 0.719

gacggcaggatagtacgatgcgcgatttcgtc	CRISPR spacer
aaggacaggatagtacaatgggcgatttacag	Protospacer
.* *.***********.*** *******

191. spacer 3.14|757599|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012710 (Psychrobacter urativorans strain R310.10B plasmid 4, complete sequence) position: , mismatch: 9, identity: 0.719

ctgtgatgcgtcgttttttattcctgatttta	CRISPR spacer
ctgtgatgcgtccttttttagtcgattaatca	Protospacer
************ ******* **      *.*

192. spacer 3.14|757599|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012710 (Psychrobacter urativorans strain R310.10B plasmid 4, complete sequence) position: , mismatch: 9, identity: 0.719

ctgtgatgcgtcgttttttattcctgatttta	CRISPR spacer
ctgtgatgcgtccttttttagtcgattaatca	Protospacer
************ ******* **      *.*

193. spacer 3.14|757599|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 9, identity: 0.719

ctgtgatgcgtcgttttttattcctgatttta	CRISPR spacer
tcaagatgtgtcattttttattcctgaaaata	Protospacer
... ****.***.**************   **

194. spacer 3.14|757599|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MN855825 (Bacteriophage sp. isolate 166, complete genome) position: , mismatch: 9, identity: 0.719

ctgtgatgcgtcgttttttattcctgatttta	CRISPR spacer
tagcgcctcgtccttttttattgctgattttg	Protospacer
. *.* . **** ********* ********.

195. spacer 3.15|757660|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 9, identity: 0.719

aggtcagagccgcgcagggccaaatacgcgcg	CRISPR spacer
ggcacctgcccgcgcaggtccaaaaacgcgcg	Protospacer
.*  *  . ********* ***** *******

196. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_007766 (Rhizobium etli CFN 42 plasmid p42f, complete sequence) position: , mismatch: 9, identity: 0.719

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
gatccatcggtgccttcgccggcctccacaat	Protospacer
*   ********** * ***********  ..

197. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
aaggtgatcgtgccgtagccggcatccaccgc	Protospacer
. **.. . ************** **** ***

198. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 9, identity: 0.719

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
accctcccggtgccgcagccggcgtccagcac	Protospacer
.*  . .********.******* ******.*

199. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 9, identity: 0.719

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
ataccctgcgtgccgaagccggccaccagcgc	Protospacer
... * *  ****** ******** *******

200. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013746 (Arthrobacter alpinus strain A3 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
gtgccgccgccgccgaactgcgtgccgtcgca	Protospacer
*   .  ********* ************* .

201. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024583 (Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gacatc----acgccgccgatctgcgtgccgtcgag	CRISPR spacer
----ccgcaaacgccgccggtccgcgtgccgtcgct	Protospacer
    .*    *********.**.***********

202. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 9, identity: 0.719

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
acggtgtggctgccgatctgcgtgccgttgag	Protospacer
.  .*   **.*****************.***

203. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013345 (Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
cggttcacgccgccgaactgcctgccgacatg	Protospacer
 .  ************ **** ***** *. *

204. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_010627 (Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence) position: , mismatch: 9, identity: 0.719

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
tcgagcttgccgccgatcttcgtgccatcgat	Protospacer
   * * .*********** ******.****

205. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
gtctcggtgccgtcgatcagcgtgccgtcgaa	Protospacer
* * . ..****.***** ************.

206. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MN586020 (Microbacterium phage Megan, complete genome) position: , mismatch: 9, identity: 0.719

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
ctgtccacgccgccgaactgcgcgccgtagcg	Protospacer
    .*********** *****.***** * *

207. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_030937 (Xanthomonas phage f30-Xaj, complete genome) position: , mismatch: 9, identity: 0.719

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
agcgtcgcgccgccgagctgcgtgccggtgca	Protospacer
..*.**.********* ********** .* .

208. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_030928 (Xanthomonas phage f20-Xaj, complete genome) position: , mismatch: 9, identity: 0.719

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
agcgtcgcgccgccgagctgcgtgccggtgca	Protospacer
..*.**.********* ********** .* .

209. spacer 3.20|757965|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 9, identity: 0.719

ccccttacgcggcttggacgtatcctcacagc	CRISPR spacer
tcaatcacgcggctcggacgtatccgcacgcg	Protospacer
.*  *.********.********** ***.

210. spacer 3.23|758148|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to KR072689 (Paracoccus phage Shpa, complete genome) position: , mismatch: 9, identity: 0.719

aagagccagaaatcaaggcctaaatgccggtg	CRISPR spacer
tgctggaagaaatcaaggccgaaaagccggtt	Protospacer
 .  *  ************* *** ******

211. spacer 3.24|758209|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026206 (Escherichia coli strain ECONIH5 plasmid pECO-cbb3, complete sequence) position: , mismatch: 9, identity: 0.719

caacctgcgtctaatcctggagaatgaccccg	CRISPR spacer
caacctgcgtctgatccaggagatcaatcaaa	Protospacer
************.**** ***** ..*.*  .

212. spacer 3.27|758393|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035511 (Haematobacter massiliensis strain OT1 plasmid pOT1-1, complete sequence) position: , mismatch: 9, identity: 0.719

gcgagcggtgcgcgggtgccggtcttggtcgc	CRISPR spacer
atcgcgcgtgcgcgggtgccggtcgtggtcgg	Protospacer
.. .   ***************** ******

213. spacer 3.32|758698|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015523 (Sphingomonas sp. NIC1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttcgcggccctgctcaagaatgcgggcca	CRISPR spacer
cgtgccgcggccctgctcaaggatgcgggtat	Protospacer
.   .****************.*******.

214. spacer 3.33|758759|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022220 (Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence) position: , mismatch: 9, identity: 0.719

tctacatcgccatgaagggcgctaacatcctg	CRISPR spacer
ggtctgtcgccatgaagcgcgccaacatcggg	Protospacer
  * ..*********** ****.******  *

215. spacer 3.33|758759|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_011892 (Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence) position: , mismatch: 9, identity: 0.719

tctacatcgccatgaagggcgct---aacatcctg	CRISPR spacer
tcttcatcgccacgaagggcgctccggatgtt---	Protospacer
*** ********.**********   .*..*.

216. spacer 3.33|758759|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030052 (Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tctacatcgccatgaagggcgctaacatcctg	CRISPR spacer
ggtctgtcgccatgaagcgcgccaacatcggg	Protospacer
  * ..*********** ****.******  *

217. spacer 3.33|758759|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030054 (Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tctacatcgccatgaagggcgctaacatcctg	CRISPR spacer
ggtctgtcgccatgaagcgcgccaacatcggg	Protospacer
  * ..*********** ****.******  *

218. spacer 3.37|759003|32|NC_013851|CRISPRCasFinder,CRT matches to NC_012809 (Methylorubrum extorquens AM1 plasmid p2META1, complete sequence) position: , mismatch: 9, identity: 0.719

attcgcgatcgggcgcaagaggaggctgagac	CRISPR spacer
cgatccgatcgggcgcaagaagtggctgatcc	Protospacer
   . ***************.* ******  *

219. spacer 3.37|759003|32|NC_013851|CRISPRCasFinder,CRT matches to NC_012809 (Methylorubrum extorquens AM1 plasmid p2META1, complete sequence) position: , mismatch: 9, identity: 0.719

attcgcgatcgggcgcaagaggaggctgagac	CRISPR spacer
cgatccgatcgggcgcaagaagtggctgatcc	Protospacer
   . ***************.* ******  *

220. spacer 3.37|759003|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP017427 (Methylobacterium sp. XJLW plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

attcgcgatcgggcgcaagaggaggctgagac	CRISPR spacer
cgatccgatcgggcgcaagaagtggctgatcc	Protospacer
   . ***************.* ******  *

221. spacer 3.41|759247|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP017422 (Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence) position: , mismatch: 9, identity: 0.719

tcctgttcctcgtggctggcgatggctgtggc	CRISPR spacer
gggcgttcgtcgtggctggctatggctgcctc	Protospacer
   .**** *********** *******.  *

222. spacer 3.41|759247|32|NC_013851|CRISPRCasFinder,CRT matches to NC_021229 (Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919) position: , mismatch: 9, identity: 0.719

tcctgttcctcgtggctggcgatggctgtggc	CRISPR spacer
gggcgttcgtcgtggctggctatggctgcctc	Protospacer
   .**** *********** *******.  *

223. spacer 3.44|759430|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP029359 (Azospirillum sp. CFH 70021 plasmid unnamed4) position: , mismatch: 9, identity: 0.719

gtgccttcgcccgtccagccggtccagccatg	CRISPR spacer
ctcgatcggcccgaccagccgctccagccatc	Protospacer
 *   *. ***** ******* *********

224. spacer 3.44|759430|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP022306 (Thalassococcus sp. S3 plasmid pS3C, complete sequence) position: , mismatch: 9, identity: 0.719

gtgccttcgcccgtccagccggtccagccatg	CRISPR spacer
ctccgttcgcccgtccagccagtcgagcgtca	Protospacer
 * * ***************.*** ***  ..

225. spacer 3.46|759552|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gcgataaagcgcttgttcgcgctgttcgatac	CRISPR spacer
ctgataaagcgcttgtttgcgctctttactca	Protospacer
 .***************.***** **.. *

226. spacer 3.46|759552|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP051294 (Mesorhizobium sp. NZP2077 plasmid pMSNZP2077A, complete sequence) position: , mismatch: 9, identity: 0.719

gcgataaagcgcttgttcgcgctgttcgatac	CRISPR spacer
ttcctgaatctcttgttcgcgctgttcgacat	Protospacer
 .  *.** * ******************.*.

227. spacer 3.46|759552|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP033363 (Mesorhizobium sp. NZP2077 plasmid pMSNZP2077NSa, complete sequence) position: , mismatch: 9, identity: 0.719

gcgataaagcgcttgttcgcgctgttcgatac	CRISPR spacer
ttcctgaatctcttgttcgcgctgttcgacat	Protospacer
 .  *.** * ******************.*.

228. spacer 3.48|759674|32|NC_013851|CRISPRCasFinder,CRT matches to NC_012853 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132503, complete sequence) position: , mismatch: 9, identity: 0.719

acaaacgagggcgcggataccgaccgctggat	CRISPR spacer
ccctttccgggcgcggacaccgagcgctggat	Protospacer
 *   .  *********.***** ********

229. spacer 3.48|759674|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP044080 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

acaaacg-----agggcgcggataccgaccgctggat	CRISPR spacer
-----cgcctgtcgggcgtcgataccgaccgctggaa	Protospacer
     **      *****. ****************

230. spacer 3.50|759796|32|NC_013851|CRISPRCasFinder,CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 9, identity: 0.719

tcagccatgtcggtcgtcagatcctgcaaatt	CRISPR spacer
atggtcatgtcgttcgtcagatccagcaggat	Protospacer
 ..*.******* *********** ***.. *

231. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP025015 (Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence) position: , mismatch: 9, identity: 0.719

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtcggtctcgtcgtcgagaccggagagccg	Protospacer
**** ****************** ...  *.

232. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
ccctgctgctcgtcgtcgcgactcagatcctg	Protospacer
*  *.   ********** ***.********

233. spacer 3.59|760345|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

ccgcccagaccgtccaggaggctcctggcggc	CRISPR spacer
ccgcgcaggccgtccaggaggctgtcgcatcc	Protospacer
**** ***.************** ..*    *

234. spacer 3.60|760406|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 9, identity: 0.719

gctgaatccccggatgatggggcgcgggtcgc	CRISPR spacer
ggggcggttccggatggcggggcgcgggtcgc	Protospacer
*  * . ..*******..**************

235. spacer 3.60|760406|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 9, identity: 0.719

gctgaatccccggatgatggggcgcgggtcgc	CRISPR spacer
ggggcggttccggatggcggggcgcgggtcgc	Protospacer
*  * . ..*******..**************

236. spacer 3.67|760833|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029362 (Streptomyces globisporus strain TFH56 plasmid pTFSG1, complete sequence) position: , mismatch: 9, identity: 0.719

cgaggactgcaagtcctggctgcgctcgccga	CRISPR spacer
tccgatgtgcacgtcctggctgcgcttgccgg	Protospacer
.  *.  **** **************.****.

237. spacer 3.67|760833|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013739 (Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence) position: , mismatch: 9, identity: 0.719

cgaggactgcaagtcctggctgcgctcgccga	CRISPR spacer
tccgatgtgcacgtcctggctgcgcttgccgg	Protospacer
.  *.  **** **************.****.

238. spacer 3.71|761077|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_013193 (Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmid pAph01, complete sequence) position: , mismatch: 9, identity: 0.719

ggcagcgagttcctcgacgagatggtgcgcac	CRISPR spacer
atgcgcgacatcctcgacgagatggtgcagat	Protospacer
.   ****  ******************. *.

239. spacer 3.71|761077|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 9, identity: 0.719

ggcagcgagttcctcgacgagatggtgcgcac	CRISPR spacer
cgcatcgagttcctcgacgagctgcccaagac	Protospacer
 *** **************** ** .  . **

240. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006371 (Aureimonas sp. AU20 plasmid pAU20d, complete sequence) position: , mismatch: 9, identity: 0.719

tcgagcaaccgcagcgcgttcgggaactgcgt	CRISPR spacer
cggagcatgcgcagcgcgttcgggacgaccgg	Protospacer
. *****  ****************    **

241. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_011885 (Cyanothece sp. PCC 7425 plasmid pP742502, complete sequence) position: , mismatch: 9, identity: 0.719

tcgagcaaccgcagcgcgttcgggaactgcgt	CRISPR spacer
tgaagcaaccgcagcgcgtaagggaagcaatt	Protospacer
* .****************  ***** ..  *

242. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MF668280 (Mycobacterium phage Phabba, complete genome) position: , mismatch: 9, identity: 0.719

tcgagcaa--ccgcagcgcgttcgggaactgcgt	CRISPR spacer
--ggaccgttccgcatcgcgttctggaactgcgc	Protospacer
  *..* .  ***** ******* *********.

243. spacer 3.76|761383|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP003988 (Streptomyces sp. 769 plasmid pSGZL, complete sequence) position: , mismatch: 9, identity: 0.719

cggagcaaggccgcagtagccgcgacggcgag	CRISPR spacer
cgtccatccgccgcagcagccgcgccggcgag	Protospacer
**       *******.******* *******

244. spacer 3.83|761810|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.719

agcgtcagccgctccgcgatggctagtccagg	CRISPR spacer
cgcgtcagccggtccgcgagggcttccccgcc	Protospacer
 ********** ******* ****  .**.

245. spacer 3.83|761810|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_023606 (Mycobacterium phage CRB1, complete genome) position: , mismatch: 9, identity: 0.719

agcgtcagccgctccgcgatggctagtccagg	CRISPR spacer
cgcgtcggccgcgccgcgatggctctcacgcg	Protospacer
 *****.***** ***********  . *. *

246. spacer 3.84|761871|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gcgccgggcgtgcgatcgatctcgtcaaatat	CRISPR spacer
tcgccgggcgtgcgttcgatatcgaacaggtt	Protospacer
 ************* ***** ***   *.  *

247. spacer 3.2|756867|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tgggcgtcgacgcgatcgcgccattcggtgtc	CRISPR spacer
cgggcctcgacgcgatcgcgcaatcgcactgc	Protospacer
.**** *************** **.  ..  *

248. spacer 3.2|756867|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014570 (Serpentinomonas mccroryi strain B1 plasmid pSMB1, complete sequence) position: , mismatch: 10, identity: 0.688

tgggcgtcgacgcgatcgcgccat----tcggtgtc--	CRISPR spacer
--ctcgtcga----atcgcgccatcgcgtcgacgtctg	Protospacer
    ******    **********    ***..***

249. spacer 3.2|756867|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_002682 (Mesorhizobium japonicum MAFF 303099 plasmid pMLb, complete sequence) position: , mismatch: 10, identity: 0.688

tgggcgtcgacgcgatcgcgccattcggtgtc	CRISPR spacer
ccatcgacgacgcgaacgcgccattcgccgca	Protospacer
. . ** ******** *********** .*.

250. spacer 3.9|757294|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_019894 (Singulisphaera acidiphila DSM 18658 plasmid pSINAC02, complete sequence) position: , mismatch: 10, identity: 0.688

ttcagcgcggtcttgaacgcctcgaatgtgat	CRISPR spacer
gccagcgcggtcttgatcgcctcgacacccgc	Protospacer
 .************** ********   . ..

251. spacer 3.10|757355|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MN018232 (Synechococcus phage S-B43, complete genome) position: , mismatch: 10, identity: 0.688

gtgtacaccaccttttctaagtaaaacaagca	CRISPR spacer
tgttacaccaccttttgtacgtaaaaccccgc	Protospacer
   ************* ** *******

252. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015165 (Acetobacter ascendens strain LMG 1590 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
ccagacagcaaatgcttcctcttccatgccac	Protospacer
*. ********..*************    .

253. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 10, identity: 0.688

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
ccgctttccaagcgcttccgcttccggcaggt	Protospacer
*.   .  *********** *****.*****

254. spacer 3.12|757477|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021512 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-3, complete sequence) position: , mismatch: 10, identity: 0.688

ctcgacagcaagcgcttcctcttccagcagga	CRISPR spacer
ccagacagcaaatgcttcctcttccatacccc	Protospacer
*. ********..*************

255. spacer 3.15|757660|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 10, identity: 0.688

aggtcagagccgcgcagggccaaatacgcgcg	CRISPR spacer
tacgtacgcccacgcaaggccaaatacgcgcg	Protospacer
 .  .* . **.****.***************

256. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
tgctccccggtgacgtagccggcctcgagccg	Protospacer
    * .***** ************* ***

257. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 10, identity: 0.688

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
tgctccccggtgacgtagccggcctcgagccg	Protospacer
    * .***** ************* ***

258. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
tccctggcggtgccgaaggcggcctccagcat	Protospacer
 *  .. ******** ** ***********..

259. spacer 3.16|757721|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MH271302 (Gordonia phage Margaret, complete genome) position: , mismatch: 10, identity: 0.688

gcggcatcggtgccgtagccggcctccagcgc	CRISPR spacer
tacgtggaggtgccgtacccggcctccatcgg	Protospacer
   *..  ********* ********** **

260. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
cggggcgcgccgccgatctgcgcgacgtcggc	Protospacer
 . . *.***************.* *****.

261. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 10, identity: 0.688

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
cggcccgcgccgccgatctgcgcgacgtcggc	Protospacer
 .  .*.***************.* *****.

262. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 10, identity: 0.688

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
cggcccgcgccgccgatctgcgcgacgtcggc	Protospacer
 .  .*.***************.* *****.

263. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
cgcgggccggcgccgatcagcgtgccgtcggc	Protospacer
 .*.   ** ******** ***********.

264. spacer 3.26|758332|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gtcatgcgccgtcggcacagacgagaacgcta	CRISPR spacer
ccccgatgccttcggcaccgacgagaacgcgg	Protospacer
 .*  ..*** ******* *********** .

265. spacer 3.27|758393|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022542 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-2, complete sequence) position: , mismatch: 10, identity: 0.688

gcgagcggtgcgcgggtgccggtcttggtcgc	CRISPR spacer
ctgagcgacgcgcgggtgccggtctcaccgcc	Protospacer
 .*****..****************.. .  *

266. spacer 3.27|758393|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_004319 (Corynebacterium efficiens YS-314 plasmid pCE2, complete sequence) position: , mismatch: 10, identity: 0.688

gcgagcggtgcgcgggtgccggtcttggtcgc	CRISPR spacer
attctgggtgctcgggtgccgttcttggtggt	Protospacer
..    ***** ********* ******* *.

267. spacer 3.27|758393|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_004808 (Streptomyces rochei plasmid pSLA2-L DNA, complete sequence) position: , mismatch: 10, identity: 0.688

gcgagcggtgcgcgggtgccggtcttggtcgc	CRISPR spacer
tcgagcggtgcgccggtgacggtcgagcagaa	Protospacer
 ************ **** *****  *   .

268. spacer 3.30|758576|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_020292 (Clostridium saccharoperbutylacetonicum N1-4(HMT) plasmid Csp_135p, complete sequence) position: , mismatch: 10, identity: 0.688

gaggtattcattcatttttgaatcgatctgac	CRISPR spacer
attatattcattcttttttgaatctatcactt	Protospacer
.  .********* ********** ***   .

269. spacer 3.37|759003|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP039640 (Azospirillum sp. TSH100 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

attcgcgatcgggcgcaagaggaggctgagac	CRISPR spacer
tcacccgatcaggcggaagaggaggctggcgg	Protospacer
 . * *****.**** ************. .

270. spacer 3.42|759308|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 10, identity: 0.688

aacgccctacagctcgcgcggcagaacgagat	CRISPR spacer
cgaggtgatcagctcgcgcggcacgacgagat	Protospacer
 . * .   ************** .*******

271. spacer 3.42|759308|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 10, identity: 0.688

aacgccctacagctcgcgcggcagaacgagat	CRISPR spacer
cgaggtgatcagctcgcgcggcacgacgagat	Protospacer
 . * .   ************** .*******

272. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP049040 (Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_3, complete sequence) position: , mismatch: 10, identity: 0.688

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
aattccatctcgtcgtcgagaccgcgatccag	Protospacer
 . *  .****************  *****

273. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP049042 (Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_5, complete sequence) position: , mismatch: 10, identity: 0.688

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
aattccatctcgtcgtcgagaccgcgatccag	Protospacer
 . *  .****************  *****

274. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 10, identity: 0.688

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
cggtcggcctcgtcgtcgagaccggcgaaccg	Protospacer
**** **.*************** . .  *.

275. spacer 3.55|760101|32|NC_013851|CRISPRCasFinder,CRT matches to NC_048733 (Microbacterium phage Burro, complete genome) position: , mismatch: 10, identity: 0.688

cggtaggtctcgtcgtcgagacccagatcctt	CRISPR spacer
ccgtaggtctcgaagtcgagacccacgatgcc	Protospacer
* **********  *********** . . ..

276. spacer 3.58|760284|32|NC_013851|CRISPRCasFinder,CRT matches to NC_048139 (Streptomyces phage Hiyaa, complete genome) position: , mismatch: 10, identity: 0.688

accgtggatccggtcggacgctggcgatagac	CRISPR spacer
ggtctggttccgttcggacgctggcgatgtca	Protospacer
. . *** **** ***************.

277. spacer 3.59|760345|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027240 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

ccgcccagaccgtccaggaggctcctggcggc	CRISPR spacer
ggctgcgtgccgtccaagacgctcctggcggc	Protospacer
   . *. .*******.** ************

278. spacer 3.59|760345|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046569 (Dietzia sp. DQ12-45-1b plasmid pII, complete sequence) position: , mismatch: 10, identity: 0.688

ccgcccagaccgtccaggaggctcctggcggc	CRISPR spacer
ggctgcgtgccgtccaagacgctcctggcggc	Protospacer
   . *. .*******.** ************

279. spacer 3.61|760467|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

acgccgaacggctctgggcgtgctcgggtcgc	CRISPR spacer
acgccgaacggctcacggcgtgcggatccaac	Protospacer
**************  *******  .  . .*

280. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030325 (Staphylococcus aureus strain AR_474 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

281. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041740 (Enterococcus faecalis EnGen0107 strain B594 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

282. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030382 (Staphylococcus aureus strain ER03761.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

283. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030491 (Staphylococcus aureus strain ER02837.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

284. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP003674 (Staphylococcus warneri SG1 plasmid clone pvSw5 genomic sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

285. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030388 (Staphylococcus aureus strain ER01062.3 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

286. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030497 (Staphylococcus aureus strain ER02658.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

287. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_010419 (Staphylococcus aureus plasmid pTZ2162, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

288. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_005054 (Staphylococcus aureus plasmid pLW043, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

289. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030554 (Staphylococcus aureus strain PS00003.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

290. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_002774 (Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

291. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027419 (Staphylococcus cohnii strain FDAARGOS_334 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

292. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030614 (Staphylococcus aureus strain ER01560.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

293. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_013338 (Staphylococcus aureus plasmid SAP068A, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

294. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030618 (Staphylococcus aureus strain ER04440.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

295. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP020314 (Staphylococcus aureus strain KUH140046 plasmid p01KUH140046, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

296. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030671 (Staphylococcus aureus strain ER00951.3 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

297. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035293 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

298. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_012547 (Staphylococcus aureus plasmid pGO1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

299. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030622 (Staphylococcus aureus strain ER01524.3 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

300. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_005024 (Staphylococcus aureus plasmid pSK41, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

301. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_013320 (Staphylococcus aureus plasmid SAP014A, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

302. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_013342 (Staphylococcus aureus plasmid SAP079A, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

303. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_013344 (Staphylococcus aureus plasmid SAP082A, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

304. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030538 (Staphylococcus aureus strain ER02094.3 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

305. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030639 (Staphylococcus aureus strain ER04165.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

306. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP020325 (Staphylococcus aureus strain KUN1163 plasmid p01KUN1163, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

307. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP020319 (Staphylococcus aureus strain KUH180038 plasmid p01KUH180038, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

308. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030435 (Staphylococcus aureus strain ER00610.3 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

309. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031278 (Staphylococcus hominis strain 19A plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

310. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031278 (Staphylococcus hominis strain 19A plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

311. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054005 (Staphylococcus hominis strain FDAARGOS_762 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

312. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051648 (Staphylococcus caprae strain SY333 plasmid pSY333-45, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

313. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030677 (Staphylococcus aureus strain ER01533.3 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

314. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP020321 (Staphylococcus aureus strain KUH180062 plasmid p01KUH180062, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

315. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029674 (Staphylococcus aureus strain AR_0219 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

316. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017321 (Staphylococcus aureus strain MI plasmid pMI, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

317. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to AP012550 (Staphylococcus aureus plasmid pN315G DNA, complete sequence, strain: N315G) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

318. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026963 (Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

319. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030429 (Staphylococcus aureus strain ER03760.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

320. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030648 (Staphylococcus aureus strain ER03556.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

321. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031887 (Staphylococcus aureus strain CFSAN082783 plasmid pMRSA_24, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

322. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030407 (Staphylococcus aureus strain PS00002.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

323. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054578 (Staphylococcus saprophyticus strain UTI-050 plasmid pUTI-050-3, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

324. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016854 (Staphylococcus aureus subsp. aureus strain 5118.N plasmid p5118.Nb, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

325. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030678 (Staphylococcus aureus strain ER00573.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

326. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014130 (Staphylococcus epidermidis strain FDAARGOS_161 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

327. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_013372 (Staphylococcus epidermidis plasmid SAP016A, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

328. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_009619 (Staphylococcus aureus subsp. aureus JH1 plasmid pSJH101, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

329. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034113 (Staphylococcus epidermidis strain CDC120 plasmid pSTA492, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

330. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH587578 (Staphylococcus aureus strain WG1647 plasmid pWBG615, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

331. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030591 (Staphylococcus aureus strain ER02989.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

332. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_009477 (Staphylococcus aureus subsp. aureus JH9 plasmid pSJH901, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

333. spacer 3.65|760711|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP030453 (Staphylococcus aureus strain PS00001.3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actttgatatcctgtctttatcattaaagaac	CRISPR spacer
actttgatatcttgtctttctcaccttaatgt	Protospacer
***********.******* ***..  *. ..

334. spacer 3.71|761077|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_013207 (Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 plasmid pAACI02, complete sequence) position: , mismatch: 10, identity: 0.688

ggcagcgagttcctcgacgagatggtgcgcac	CRISPR spacer
tctcaagacttcctcgacgagatggcgcgccg	Protospacer
  . . ** ****************.****

335. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031600 (Roseovarius indicus strain DSM 26383 plasmid pRIdsm_02, complete sequence) position: , mismatch: 10, identity: 0.688

tcgagcaaccgcagcgcgttcgggaactgcgt	CRISPR spacer
cgacggcaccgcaacgcgttcgggaacagcac	Protospacer
. . *  ******.************* **..

336. spacer 3.75|761322|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 10, identity: 0.688

tgtcattcctcccgcccggcgcagtcataaag	CRISPR spacer
gctcattcctccctcccggcgcggtcgcgctc	Protospacer
  *********** ********.***...

337. spacer 3.76|761383|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012575 (Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence) position: , mismatch: 10, identity: 0.688

cggagcaaggccgcagtagccgcgacggcgag	CRISPR spacer
gccgttgtggccgcagtcgccgcgacggcgat	Protospacer
   . .. ********* *************

338. spacer 3.76|761383|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to CP048046 (Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence) position: , mismatch: 10, identity: 0.688

cggagcaaggccgcagtagccgcgacggcgag	CRISPR spacer
gccgttgtggccgcagtcgccgcgacggcgat	Protospacer
   . .. ********* *************

339. spacer 3.76|761383|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048050 (Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence) position: , mismatch: 10, identity: 0.688

cggagcaaggccgcagtagccgcgacggcgag	CRISPR spacer
gccgttgtggccgcagtcgccgcgacggcgat	Protospacer
   . .. ********* *************

340. spacer 3.76|761383|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048048 (Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence) position: , mismatch: 10, identity: 0.688

cggagcaaggccgcagtagccgcgacggcgag	CRISPR spacer
gccgttgtggccgcagtcgccgcgacggcgat	Protospacer
   . .. ********* *************

341. spacer 3.76|761383|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 10, identity: 0.688

cggagcaaggccgcagtagccgcgacggcgag	CRISPR spacer
tgcgctccggccgaagtggccgcgacggcgat	Protospacer
.* . .  ***** ***.*************

342. spacer 3.76|761383|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 10, identity: 0.688

cggagcaaggccgcagtagccgcgacggcgag	CRISPR spacer
gatggcaaggccgcagtcgccgagacgtccgc	Protospacer
 . .************* **** **** * .

343. spacer 3.77|761444|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MK814752 (Gordonia phage Lutum, complete genome) position: , mismatch: 10, identity: 0.688

accgaatccccgacgaccccaggatcccaaga	CRISPR spacer
ggcagatccccgacgaccccatgaacccgtcc	Protospacer
. *..**************** ** ***.

344. spacer 3.77|761444|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MH779504 (Gordonia phage Getalong, complete genome) position: , mismatch: 10, identity: 0.688

accgaatccccgacgaccccaggatcccaaga	CRISPR spacer
ggcagatccccgacgaccccatgaacccgtcg	Protospacer
. *..**************** ** ***.  .

345. spacer 3.77|761444|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MH651185 (Gordonia phage Phistory, complete genome) position: , mismatch: 10, identity: 0.688

accgaatccccgacgaccccaggatcccaaga	CRISPR spacer
ggcagatccccgacgaccccatgaacccgtcg	Protospacer
. *..**************** ** ***.  .

346. spacer 3.77|761444|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MK376961 (Gordonia phage Asapag, complete genome) position: , mismatch: 10, identity: 0.688

accgaatccccgacgaccccaggatcccaaga	CRISPR spacer
ggcagatccccgacgaccccatgaacccgtcc	Protospacer
. *..**************** ** ***.

347. spacer 3.77|761444|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_048141 (Gordonia phage Kenna, complete genome) position: , mismatch: 10, identity: 0.688

accgaatccccgacgaccccaggatcccaaga	CRISPR spacer
ggcagatccccgacgaccccatgaacccgtcc	Protospacer
. *..**************** ** ***.

348. spacer 3.77|761444|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MH651176 (Gordonia phage Horus, complete genome) position: , mismatch: 10, identity: 0.688

accgaatccccgacgaccccaggatcccaaga	CRISPR spacer
ggcagatccccgacgaccccatgaacccgtcg	Protospacer
. *..**************** ** ***.  .

349. spacer 3.77|761444|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_048018 (Gordonia phage Apricot, complete genome) position: , mismatch: 10, identity: 0.688

accgaatccccgacgaccccaggatcccaaga	CRISPR spacer
ggcagatccccgacgaccccatgaacccgtcg	Protospacer
. *..**************** ** ***.  .

350. spacer 3.77|761444|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to MK937597 (Gordonia phage Spooky, complete genome) position: , mismatch: 10, identity: 0.688

accgaatccccgacgaccccaggatcccaaga	CRISPR spacer
ggcagatccccgacgaccccatgaacccgtcc	Protospacer
. *..**************** ** ***.

351. spacer 3.77|761444|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_047891 (Gordonia phage BENtherdunthat, complete genome) position: , mismatch: 10, identity: 0.688

accgaatccccgacgaccccaggatcccaaga	CRISPR spacer
ggcagatccccgacgaccccatgaacccgtcc	Protospacer
. *..**************** ** ***.

352. spacer 3.84|761871|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

gcgccgggcgtgcgatcgatctcgtcaaatat	CRISPR spacer
tgacgggccgtgcgatcgatcccgtcaacggc	Protospacer
  .* ** *************.******  ..

353. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 11, identity: 0.656

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
agacctgcgccgccgatcagcgcgccgtcggc	Protospacer
..  ...*********** ***.*******.

354. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to MN586053 (Arthrobacter phage BeatusComedenti, complete genome) position: , mismatch: 11, identity: 0.656

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
ccggacacgccgccgctcttcgtgccgttctc	Protospacer
   . ********** *** ********.

355. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_031254 (Arthrobacter phage Kitkat, complete genome) position: , mismatch: 11, identity: 0.656

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
ccggacacgccgccgctcttcgtgccgttctc	Protospacer
   . ********** *** ********.

356. spacer 3.17|757782|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to NC_031231 (Arthrobacter phage KellEzio, complete genome) position: , mismatch: 11, identity: 0.656

gacatcacgccgccgatctgcgtgccgtcgag	CRISPR spacer
ccggacacgccgccgctcttcgtgccgttctc	Protospacer
   . ********** *** ********.

357. spacer 3.31|758637|32|NC_013851|PILER-CR,CRISPRCasFinder,CRT matches to KY709687 (Salmonella phage 29485, complete genome) position: , mismatch: 11, identity: 0.656

ttttctcgctcattggtcgcctcgtgacgcat	CRISPR spacer
caatctcgctcattggttgcctcctgtttttc	Protospacer
.  **************.***** ** . . .

358. spacer 3.44|759430|32|NC_013851|CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

gtgccttcgcccgtccagccggtccagccatg	CRISPR spacer
aaaggttcgccggtccagccgctccagcgtga	Protospacer
. .  ****** ********* ******   .

359. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014639 (Leptolyngbya boryana IAM M-101 plasmid pLBA) position: , mismatch: 11, identity: 0.656

tcgagcaaccgcagcgcgttcgggaactgcgt	CRISPR spacer
agttacaacagcagcgcgatcgggaacttttc	Protospacer
    .**** ******** ********* . .

360. spacer 3.73|761199|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NC_020543 (Sphingomonas sp. MM-1 plasmid pISP2, complete sequence) position: , mismatch: 11, identity: 0.656

tcgagcaaccgcagcgcgttcgggaactgcgt	CRISPR spacer
catgccaaccgcagcgcgttcggtacctcgac	Protospacer
.  . ****************** * **  ..

361. spacer 3.79|761566|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007510 (Pseudomonas stutzeri strain 19SMN4 plasmid pLIB119, complete plasmid) position: , mismatch: 11, identity: 0.656

gtacggacgcagcgactcttggtggcgctgtg	CRISPR spacer
cgctttacgcagcgcctcctggtggcgcttga	Protospacer
   .  ******** ***.**********  .

362. spacer 3.79|761566|32|NC_013851|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 11, identity: 0.656

gtacggacgcagcgactcttggtggcgctgtg	CRISPR spacer
agtcggccgctgcgactcttggtggcctcaat	Protospacer
.  *** *** *************** ...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2029468 : 2037011

Staphylococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012970971.1\|2029468_2029939_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.3e-29	44.3
WP_012970972.1\|2029969_2031100_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	M4QPK3	Synechococcus_phage	1.5e-34	39.9
WP_012970973.1\|2031146_2031806_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.9e-29	34.1
WP_050750366.1\|2031842_2032217_-	response regulator	NA	NA	NA	NA
WP_148217483.1\|2032334_2033429_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	1.9e-42	33.8
WP_012970976.1\|2033479_2033992_-	transcriptional repressor NrdR	NA	NA	NA	NA
WP_012970977.1\|2034107_2035364_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	4.3e-99	52.1
WP_012970978.1\|2035478_2035970_+	hypothetical protein	NA	NA	NA	NA
WP_012970979.1\|2036117_2037011_+	alpha/beta hydrolase	A0A0B5A484	Mycobacterium_phage	7.4e-05	25.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_013852

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_013851

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection