CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	1 crisprs	csa3	2	25	0
NC_014019	Bacillus megaterium QM B1551, complete sequence	9 crisprs	DinG,csa3,cas3,WYL,RT,DEDDh,cas14j	0	0	3
NC_014023	Bacillus megaterium QM B1551 plasmid pBM700, complete sequence	0 crisprs	RT	0	0	0
NC_014031	Bacillus megaterium QM B1551 plasmid pBM600, complete sequence	0 crisprs	NA	0	0	1
NC_010008	Bacillus megaterium QM B1551 plasmid pBM100, complete sequence	0 crisprs	NA	0	0	0
NC_010009	Bacillus megaterium QM B1551 plasmid pBM200, complete sequence	0 crisprs	NA	0	0	0
NC_010010	Bacillus megaterium QM B1551 plasmid pBM300, complete sequence	0 crisprs	NA	0	0	0
NC_004604	Bacillus megaterium QM B1551 plasmid pBM400, complete sequence	0 crisprs	RT	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_014025_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014025_1

51459-53316

Orphan

Consensus_repeat	Method
GGAGNNACNGGANTNACNGGAG	CRT

25 spacers

The CRISPR arrays of NC_014025_1

>merge|NC_014025|1|51459-53316|CRT
GGAATTACTGGAATTACCGGAGTCACTGGGGCTACTGGAGCAACGGGAGCTACCGGAGTCACTGGAGCTACTGGAGCTACTGGAATTACTGGAATTACTGGAATTACTGGAATTACTGGAATTACCGGAGTCACTGGAGCTACTGGAATTACTGGAATTACTGGAATTACCGGAGTCACTGGGGCTACTGGAGCAACGGGAGCTACCGGAGTCACTGGAGCCACTGGAATCACTGGAGCTACCGGAGTTACCGGAGTCACGGGAGTTACTGGAATCACTGGAGTCACTGGAGTGACTGGAGTTACCGGAGTCACGGGAGCTACCGGAATCACTGGAGTTACTGGAGAAACTGGAGTTACTGGAGAAACGGGAGCTACCGGAGTCACTGGAATCACTGGAGCTACTGGAATCACTGGAGTGACGGGAATCACTGGAGCTACCGGAGTCACTGGAGTGACTGGAGTTACCGGAGTCACGGGAGCTACCGGAATCACTGGAGTTACTGGAGAAACTGGAGTTACTGGAGAAACGGGAGCTACCGGAGTCACTGGAATCACTGGAGCTACTGGAATCACTGGAGTGACGGGAATCACTGGAGCTACCGGAGTCACGGGAGCTACCGGAGTTACTGGAATTACCGGAGTTACTGGAATTACCGGAGTTACTGGAGTGACTGGAGTTACCGGAATCACTGGAGTGACAGGAGCCACTGGAGCTACCGGAATCACTGGAGCTACTGGAGCTACCGGAATTACCGGAGTTACTGGAATTACCGGAGTTACTGGAGTGACTGGAGTTACCGGAATCACTGGAGTGACAGGAGCCACTGGAGCTACCGGAATCACTGGAGCTACTGGAGCTACCGGAATCACTGGAGTTACTGGAGCTACCGGAATCACTGGAGCTACCGGGATCACTGGAGCTACCGGAGTCACTGGAGTTACTGGAGTTACCGGAGTCACGGGAGCTACCGGAGCTACCGGAATCACTGGAGCTACCGGGATCACTGGAGCTACCGGAGTCACTGGAGCTACTGGAGTTACCGGAGTCACGGGAGCTACCGGAGCTACCGGAGTTACCGGAATCACTGGAGTCACTGGAGTCACGGGAGCTACCGGAGTTACTGGAGTTACTGGAGTCACTGGAGTCACTGGAGCTACCGGAGTTACTGGAGTTACTGGAATTACTGGAATTACCGGAGTGACTGGAGTTACCGGAATCACTGGAGTGACAGGAGCCACTGGAGCTACTGGAGTCACTGGAGCTACTGGAGTTACCGGAGTCACGGGAGCTACCGGAGCTACCGGAGTTACCGGAATCACTGGAGTTACTGGAGCTACCGGAGTCACGGGAGCTACCGGAATCACTGGAGCTACCGGAATCACTGGAGCTACTGGAGCTACCGGAATCACTGGAGTTACTGGAGCTACCGGAGTCACGGGAGCTACCGGAATCACTGGAGCTACCGGAGTCACTGGGGCTACTGGAGCTACCGGAATCACTGGAGTGACAGGAGCCACTGGAGCTACCGGAGTTACTGGAGTTACTGGAATCACTGGAGTCACTGGAGTTACTGGAATTACCGGAGTTACTGGAGTGACTGGAGTTACCGGAATCACTGGAGTGACAGGAGCCACTGGAGCTACCGGAGTTACTGGAGTTACTGGAATCACTGGAGTCACTGGAGTTACTGGAATTACCGGAGTTACTGGAGTGACTGGAGTTACCGGAATCACTGGAGTGACAGGAGCCACTGGAGCTACCGGAATCACTGGAGCTACTGGAGCTACTGGAGCTACCGGAATCACTGGAGTGACTGGAGCTACCGGAATCACTGGAGTGACTGGAGTCACTGGGG

>NC_014025|1|1|51459-53316|CRT
GGAATTACTGGAATTACCGGAG	TCACTGGGGCTACTGGAGCAACGGGAGCTACCGGAGTCACTGGAGCTACTGGAGCTACTGGAATTACTGGAATTACTGGAATTACT
GGAATTACTGGAATTACCGGAG	TCACTGGAGCTACTGGAATTACTGGAATTACTGGAATTACCGGAGTCACTGGGGCTACTGGAGCAACGGGAGCTACCGGAGTCACTGGAGCCACT
GGAATCACTGGAGCTACCGGAG	TTACCGGAGTCACGGGAGTTACTGGAATCACTGGAGTCACTGGAGTGACTGGAGTTACCGGAGTCACGGGAGCTACC
GGAATCACTGGAGTTACTGGAG	AAACTGGAGTTACTGGAGAAACGGGAGCTACCGGAGTCACTGGAATCACTGGAGCTACTGGAATCACTGGAGTGACG
GGAATCACTGGAGCTACCGGAG	TCACTGGAGTGACTGGAGTTACCGGAGTCACGGGAGCTACCGGAATCACTGGAGTTACTGGAGAAACTGGAGTTACT
GGAGAAACGGGAGCTACCGGAG	TCACTGGAATCACTGGAGCTACTGGAATCACTGGAGTGACGGGAATCACTGGAGCTACC
GGAGTCACGGGAGCTACCGGAG	TTACTGGAATTACCGGAGTTACTGGAATTACCGGAGTTACTGGAGTGACTGGAGTTACCGGAATCACTGGAGTGACA
GGAGCCACTGGAGCTACCGGAA	TCACTGGAGCTACTGGAGCTACCGGAATTACCGGAGTTACTGGAATTACCGGAGTTACT
GGAGTGACTGGAGTTACCGGAA	TCACTGGAGTGACAGGAGCCACTGGAGCTACCGGAATCACTGGAGCTACTGGAGCTACCGGAATCACT
GGAGTTACTGGAGCTACCGGAA	TCACTGGAGCTACCGGGATCACTGGAGCTACCGGAGTCACT
GGAGTTACTGGAGTTACCGGAG	TCACGGGAGCTACCGGAGCTACCGGAATCACTGGAGCTACCGGGATCACTGGAGCTACCGGAGTCACT
GGAGCTACTGGAGTTACCGGAG	TCACGGGAGCTACCGGAGCTACCGGAGTTACCGGAATCACTGGAGTCACTGGAGTCACGGGAGCTACC
GGAGTTACTGGAGTTACTGGAG	TCACTGGAGTCACTGGAGCTACC
GGAGTTACTGGAGTTACTGGAA	TTACTGGAATTACCGGAGTGACTGGAGTTACCGGAATCACTGGAGTGACAGGAGCCACT
GGAGCTACTGGAGTCACTGGAG	CTACTGGAGTTACCGGAGTCACGGGAGCTACCGGAGCTACC
GGAGTTACCGGAATCACTGGAG	TTACTGGAGCTACCGGAGTCACG
GGAGCTACCGGAATCACTGGAG	CTACCGGAATCACTGGAGCTACT
GGAGCTACCGGAATCACTGGAG	TTACTGGAGCTACCGGAGTCACG
GGAGCTACCGGAATCACTGGAG	CTACCGGAGTCACTGGGGCTACT
GGAGCTACCGGAATCACTGGAG	TGACAGGAGCCACTGGAGCTACCGGAGTTACT
GGAGTTACTGGAATCACTGGAG	TCACTGGAGTTACTGGAATTACCGGAGTTACTGGAGTGACT
GGAGTTACCGGAATCACTGGAG	TGACAGGAGCCACTGGAGCTACCGGAGTTACT
GGAGTTACTGGAATCACTGGAG	TCACTGGAGTTACTGGAATTACCGGAGTTACTGGAGTGACT
GGAGTTACCGGAATCACTGGAG	TGACAGGAGCCACTGGAGCTACCGGAATCACTGGAGCTACTGGAGCTACT
GGAGCTACCGGAATCACTGGAG	TGACTGGAGCTACCGGAATCACT
GGAGTGACTGGAGTCACTGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_014025.1\|WP_041816909.1\|46957_47221_+\|hypothetical-protein	unknown	unknown	unknown
NC_014025.1\|WP_013060167.1\|41428_42307_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NC_014025.1\|WP_041816908.1\|45660_45867_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
NC_014025.1\|WP_013060183.1\|54954_55602_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NC_014025.1\|WP_013060186.1\|57990_58254_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379171
NC_014025.1\|WP_013060170.1\|43330_43639_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|378584
NC_014025.1\|WP_013060172.1\|43956_45414_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173808
NC_014025.1\|WP_013060177.1\|47356_47626_+\|hypothetical-protein	unknown	unknown	unknown
NC_014025.1\|WP_013060189.1\|59710_60895_-\|membrane-protein	unknown	unknown	gnl\|CDD\|212669
NC_014025.1\|WP_013060191.1\|61492_62743_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NC_014025.1\|WP_049787064.1\|59043_59244_+\|hypothetical-protein	unknown	unknown	unknown
NC_014025.1\|WP_013060178.1\|47840_49391_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NC_014025.1\|WP_013060188.1\|59315_59693_-\|hypothetical-protein	unknown	unknown	unknown
NC_014025.1\|WP_013060185.1\|57328_57976_+\|GPP34-family-phosphoprotein	unknown	unknown	gnl\|CDD\|377552
NC_014025.1\|WP_013060174.1\|45863_46295_+\|hypothetical-protein	unknown	unknown	unknown
NC_014025.1\|WP_013060184.1\|55741_57058_+\|collagen-like-repeat-preface-domain-containing-protein	unknown	unknown	gnl\|CDD\|375999
NC_014025.1\|WP_013060166.1\|40798_41128_+\|chaperone-CsaA	unknown	unknown	gnl\|CDD\|182232
NC_014025.1\|WP_013060179.1\|49380_50481_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133005
NC_014025.1\|WP_013060187.1\|58497_58680_-\|hypothetical-protein	unknown	unknown	unknown
NC_014025.1\|WP_013060182.1\|54304_54919_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369778

Protein	Function_ID	Function_description	E-value
NC_014025.1\|WP_013060172.1\|43956_45414_-\|S8-family-serine-peptidase	gnl\|CDD\|173808	cd07482, Peptidases_S8_Lantibiotic_specific_protease, Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases. Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	1.06574e-71
NC_014025.1\|WP_013060167.1\|41428_42307_+\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	4.64245e-21
NC_014025.1\|WP_041816908.1\|45660_45867_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	2.33177e-26
NC_014025.1\|WP_013060186.1\|57990_58254_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|379171	pfam13411, MerR_1, MerR HTH family regulatory protein.	2.3402e-12
NC_014025.1\|WP_013060170.1\|43330_43639_+\|general-stress-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	2.15743e-07
NC_014025.1\|WP_013060183.1\|54954_55602_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.46144e-14
NC_014025.1\|WP_013060189.1\|59710_60895_-\|membrane-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	3.97036e-20
NC_014025.1\|WP_013060191.1\|61492_62743_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.2016e-58
NC_014025.1\|WP_013060178.1\|47840_49391_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	3.60479e-18
NC_014025.1\|WP_013060185.1\|57328_57976_+\|GPP34-family-phosphoprotein	gnl\|CDD\|377552	pfam05719, GPP34, Golgi phosphoprotein 3 (GPP34). This family consists of several eukaryotic GPP34 like proteins. GPP34 localizes to the Golgi complex and is conserved from yeast to humans. The cytosolic-ally exposed location of GPP34 predict a role for a novel coat protein in Golgi trafficking.	1.48016e-08
NC_014025.1\|WP_013060184.1\|55741_57058_+\|collagen-like-repeat-preface-domain-containing-protein	gnl\|CDD\|375999	pfam18573, BclA_C, BclA C-terminal domain. This is the C-terminal domain of BclA (Bacillus collagen-like protein of anthracis) which is expressed on spores of Bacillus species. Trimers of the C-terminal domain (CTD) form the tips of the spore's hair-like nap and are the immunodominant target of vertebrate antibodies and drive trimerization. Structure analysis indicate the C-terminal region of the peptide folding into an all-beta structure with a jelly-fold topology, similar to the first human complement C1q, a member of the tumor necrosis factor (TNF)-like family. The C-terminal globular domain has been shown to be located on the exterior of the exosporium, and therefore is critical in determining the immunogenicity of the spore in a mammalian host.	2.74981e-39
NC_014025.1\|WP_013060166.1\|40798_41128_+\|chaperone-CsaA	gnl\|CDD\|182232	PRK10089, PRK10089, chaperone CsaA.	2.35384e-60
NC_014025.1\|WP_013060179.1\|49380_50481_-\|glycosyltransferase	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	3.03778e-46
NC_014025.1\|WP_013060182.1\|54304_54919_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369778	pfam08242, Methyltransf_12, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.1809e-07

>NC_014025.1|WP_013060179.1|49380_50481_-|glycosyltransferase
MVSISLCMIVKNEEDSIGRCLESIYQLVDEINIIDTGSNDQTKKIASKYTNRIYDFEWVHDFSKARNYAFEKATKDYILWLDADDVFLEEDQQKLLALKLNLESSVDSVTMKYILATDEYGNVTSSLRRNRLVKRRNGFRWIGAVHEYLEVWGNIMNSEVAVTHKSIHHDSDRNLKIYEKKLLTGEDFSPRDLYYFANELKDHRQFKRAIEFYEKFLSTEKGWIEDNIAACRNLADCYLEIFDKERMIKSLLRSFTYTAPRPEICCRLAHYFIEKNDYQSAVFWYGSATKTGVTSDNLGIQNQAYSTWIPHIQLCVCYDALGDYEKANHHNELAGTYRPNDPKYLHNKGYLETKIPIEKVGVGNET
>NC_014025.1|WP_013060178.1|47840_49391_-|glycosyltransferase-family-2-protein
MKHKKRILVASPIHQKPEILTLFLESLKHLKKEEMIVDFYFIDDNENVDSSRLLIQFQECIQSVIVEKSDYQDVYSRDGQTHHWNEHLVWKVAGFKNSIIQYAKEKNYDYLFLVDSDLLLFPETIVHLVQQEKDIISEVFWTRWQPDSMEQPQVWLYDEYTQYHKQPGEDLSTEQIKVRYQEFIAKVRTPGVYEVGGLGACTLISQNALQKGVNFNKIPNLTFWGEDRHFCIRAAAMGLSLYVDTRYPAYHIYRDTNIKEGQEFIKKITARQKTIQSNIYVPTTKKTKLTLSMVIKNEENRFLKEVLRSYVPYIDDVVIIDDGSTDNSVEVCKEVLKTVPYKIIRNEVSKFSNEVELRKQQWEETVNTEPNWILNMDADEIFEDKFDRDIQQLLTQRDYDLYSFRLYDFWNDTHYREDDYWQSHFYYRPFLVRYRNDFSYTWQETPQHCGRFPNNIFQLPNSISDLRVKHYGWSKLEYRLEKYKRYLTLDPHAQYGTKEQYESILDENPNLIKWEE
>NC_014025.1|WP_013060177.1|47356_47626_+|hypothetical-protein
MQNRFSKYSLWLSIAGIIIAIGQYFTPLYNLNILYIGIVIYLIGFVCGVIAVGKHEKGLMKYFSLYSFVLIPVFIFFGFLFLAFQIGEK
>NC_014025.1|WP_041816909.1|46957_47221_+|hypothetical-protein
MMIGVPLLIAIIPGVIVLLLTWLFRRMKWGITVRMIPAILTVIAAIVLFYIGYVEVRGFEGAAYLFLSVFLILFAIISFVMAKKPLR
>NC_014025.1|WP_013060174.1|45863_46295_+|hypothetical-protein
MKVIRDERLVIKNLKNIRIAFAFQTLAMAGILIYDGITRGFNNVTDNPLWLVLILTSVILGYLNLGISVDSYESEKQLRKTPYYLIVIGCLTIGIIFGLLTKITSNSSVQDSTIIGLVIFLCFLGTFSFWHFLIKKRSKDEDE
>NC_014025.1|WP_041816908.1|45660_45867_+|helix-turn-helix-transcriptional-regulator
MKNNVKTFRVQADLTQHQLAEKVGVTRQTISLIEKGKYNPTLKLCLEICYVVNRTLDEIFWIDQEENK
>NC_014025.1|WP_013060172.1|43956_45414_-|S8-family-serine-peptidase
MKKKILHTVLSITVGVGILSVGGVPTQAKSKNQEMNNTYAIAFKSRLPENYQEVIQKAGGKVTKVLPEVGGIEAQSDQPSFLKNLKGNSSIEAANREIPLSLDKTAVSPYNYESSIISQQNSESYWDSQWDIQRVTNNGKSYDLETGGYKNKDGSITHKAVVGVIDTGIDESHPDLKNNIIGGRNLVPAGMDESETGDPTDIKDRNGHGTHVAGIIGANGKVKGVGPELGIRSYRVFYSEQALGLPAWIIDGIIAATNDKVDVINMSLRFYNNTKMTIEGESYKSVAETLLWKRAIQYAVKNGVTVVAGSGNESLNLDDKKEVNEFLNKMYEPYGMSVKGPATVVPAQMPGVINVSASTKWSTQQLAFYSNYGNSAIDVAAPGGDYGQKYAETNDPAAADPSNLILSTWPTYLGTSYELNAGTSMATPQVAGIAGVIKAAHPEYKPAQITARIKQTAFDYGKKGQDALFGSGEANAYRALENIKK
>NC_014025.1|WP_013060170.1|43330_43639_+|general-stress-protein
MPNIQVVEKSSHAKIAIDEFLRAGFNTDEIHLLTCNSANTINSYENELCSTNFVNPDTNILQVDEDVFFSKMQSFGISKRDAERYKESMDKGSIMVIVSKAV
>NC_014025.1|WP_013060167.1|41428_42307_+|DMT-family-transporter
MKNTLLGSIYLALAASIWGGMYVVVKVVVAVIPPLELVWIRYVIAILALFIIGLIKRQSWRINKRHIPLIVAIGVIGNAISIVTQEYGTMLSSAQMGAIITSSTPAFMVIFARLILKERLNMKKGISVGLATIGVLLIVGNGHINMSSQLGGLSLLMAALTWALMSILIKRVPSSYSPVVITTYSILVAILVLTPFVYKGLGEIHISKLIDPTIGGGLLYLGIVSTALAFILWNRGLQLLNASSGGLFFFFQPLVGTLLGWLLLGESIGGTFWIGSFLILSGVLLVIKEKTN
>NC_014025.1|WP_013060166.1|40798_41128_+|chaperone-CsaA
MATIDDFFKLDIRIGTVVKAEPFPEARKPAIKLEIDFGELGVKCSSAQITRRYKPEQLIGSQVVAVVNFPPMRIAGFKSEVLVMGGIPEEGDVVLLKPSEFVKNGTPIA
>NC_014025.1|WP_013060182.1|54304_54919_+|class-I-SAM-dependent-methyltransferase
MGDISEGKFSYVDYWEENYSNGGTSGKGSYGVLAQFKGDVINQFIKGKRIHKVIEFGCGDGNQLKYMNYPSYLGMDISPTSIDICSKMFGKDKTKSFLLYNPKYFINNGYFKSDLVVCLDVLYHITNEDDFWKTLDDIFSCKPFYIILYTRVTKPEEFVYGIPTIQDRDILSCLSRYQDYKLIQIIEQKYKELSGASFIILEKV
>NC_014025.1|WP_013060183.1|54954_55602_+|class-I-SAM-dependent-methyltransferase
MSIFTSRFILKTDPYSKHFVFNLPKTWETRPHEYEWAKNFAETEDIVLDAACGLSHPLKFYLAGKCKEVYACDIDARILSKSSILKDIRDTYGTIIENSFLNHYFHHIHFCHSSLSKLPYQDKSFDKIFCISVLEHLSKVDIEQTFKEFRRTLKDEGLLIVTFDYPTINLEALKILLDKVKFKFYGDYSLDKPDNLLVSTIWGELNCFRAVLIKN
>NC_014025.1|WP_013060184.1|55741_57058_+|collagen-like-repeat-preface-domain-containing-protein
MAYKRATKVRYFSSNHDNNYLKKGNCKEKDCIDITGSQIRRLLTILDSLKDIIPLMLRNPNTGNINTLSNLMNRLITLLNELKPNSSAVTYLITTAQSLLSSLTTTLLPPMRLVSLLQKLINRLILLITLLCLNSETYILLLKNLNQLEAILAQYTSIGITGATGPTGATGIRGTPGPPGGPGVTGITGVTGPTGATGVTGDPGITGATGSTGATGITGAAGVTGVTGITGTTGVTGDPGIAGATGITGVTGVTGDPGIAGATGSTGATGITGATGVTGATGITGATGVTGATGITGATGTSLTTNSMFAGNTVGSTILVVLGGTSVPLPSNQNLDSFTVNGTNTTFTVPATGRYYITYQINTTAALLAGSRLILNGTTPIPGSTISPAVAASSYNNDVIVSLTVGDTITLQLFGLLATVVLTGGGSTGAALTIIRLS
>NC_014025.1|WP_013060185.1|57328_57976_+|GPP34-family-phosphoprotein
MKNIEVSQKYLLLVLNDKGGVAPIGSLRIRAFMVASGILELVLDDIVSLSDNQVTVKQELPSDKEYLRSIYNKISTEKSIHLKKLGRELISKRELFKELFNSVGDSLVELDVVTKTNGGILGQSSHYIGSENSKKQIVEQMRAELLEEGPVTTDTVVLSSLLIGSRTLKNYFSKFEDKDLNDKLTMLRKDTRNKEIFALIDSISHTITTIIASVG
>NC_014025.1|WP_013060186.1|57990_58254_+|MerR-family-transcriptional-regulator
MSRRRSLEDILQSEYVSIGELSRLTDSRYSTLKYYTEAGLIPFEQSDENLTRRYPREASVQRIETIKQLKKSGLSISEISDWVVNND
>NC_014025.1|WP_013060187.1|58497_58680_-|hypothetical-protein
MNQRDQKRLAITRELMENAKKRLDLSYELEQDLENLGLQRRMKQLDLENKLLKEQNNELA
>NC_014025.1|WP_049787064.1|59043_59244_+|hypothetical-protein
MGLFFRKIDPETDSKYRKWLNFSLVIAILINLINSLFLNLRWLYITMTAVIGILAILIFKEYKDEK
>NC_014025.1|WP_013060188.1|59315_59693_-|hypothetical-protein
MSERQNAFTIKTNRLSDEVYNRLATYAKSRKLGEYISSLILRDLDDSSTGRKAIEDKKTYEMLEHIKNELADLKTLAKTTGFVGNDSFKEEEPSKVPQLKEGKIADLENISGSLDDDDLEEYNDF
>NC_014025.1|WP_013060189.1|59710_60895_-|membrane-protein
MKISRFNKDCGNSVDMNIMDGYLFDFPTNVVELQKEAADSFFTDAVTAPEEFKKRILLSTTIKGEEKERYFLVGDIAASQLLANNHINKLHNKITSHIPYITFLAAIAYYHALHAKNKKDNTIEIDYFSTMLPIWLLKKESTFGAAQKAMANRFLGDHTFTVHTPGFENTLKVLVEESACLKEGESARFALKKDLTLQDREDANEYVECETVMVDIGGGSIDVVILPEGLKAANSRESFQSIEGIPYLAHIDKLRKEKFLELFTDLRAFDQFILDNYSKQKFVLKNENTGESIDLTSTIKSSLREYVEILLAKLNDVAPPPANKLRKYVYCGGVAPTLEVAIMNSMREKIGEERTEKYHKVPQDSRHLNLFGLEIRSIGYVQKKQAAEKKAVKS
>NC_014025.1|WP_013060191.1|61492_62743_-|MFS-transporter
MEEKLPVNHSTNLFGNRVFQAIIISGLFLQIGIWVRNFAVLLFIMEKTNGDPFAVSLISVAEFAPIFIFSFIGGTFADRWRPKRTMVWCDILSAISVFAVLVTLILGSWHIVFFATLISAILSQFSQPSGMKLFKMHLPEEQMQVGMSVYQTVFAIFMVLGPILGTFAFQAFGISLSIAITGTAFLLSAAALTFLPSDRKMEEENGTTSLLSEMKSGIKYVLGKKELSLLGLCFLAAGLGIGFIQPLSIFLVTEQLGLAKENLQWLLTANGIGMILGGAVVMIFAKTVAPQRLLAFGMVGNAIGFAIMGLSVNLWLTLGAQFLNGLMLPCIQIGINTMILQRTEAAFIGRVNGILSPLFTGAMVLTMSVAGILKEQFSLVAIFEAAAVLFIIGLLFILPLYNLKEETKQEGIELGE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025.1	51436-51458	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025.1	51436-51458	2	0.913

1. spacer 1.17|52831|23|NC_014025|CRT matches to position: 51436-51458, mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctaccggagtcacgggagctact	Protospacer
********.**** *********

2. spacer 1.19|52921|23|NC_014025|CRT matches to position: 51436-51458, mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagtcacgggagctact	Protospacer
************* **.******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014025_1	1.6\|52003\|59\|NC_014025\|CRT	52003-52061	59	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51841-51899	0	1.0
NC_014025_1	1.6\|52003\|59\|NC_014025\|CRT	52003-52061	59	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52003-52061	0	1.0
NC_014025_1	1.8\|52183\|59\|NC_014025\|CRT	52183-52241	59	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52183-52241	0	1.0
NC_014025_1	1.10\|52354\|41\|NC_014025\|CRT	52354-52394	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52354-52394	0	1.0
NC_014025_1	1.10\|52354\|41\|NC_014025\|CRT	52354-52394	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52444-52484	0	1.0
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52597-52619	0	1.0
NC_014025_1	1.14\|52642\|59\|NC_014025\|CRT	52642-52700	59	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52642-52700	0	1.0
NC_014025_1	1.15\|52723\|41\|NC_014025\|CRT	52723-52763	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52489-52529	0	1.0
NC_014025_1	1.15\|52723\|41\|NC_014025\|CRT	52723-52763	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52723-52763	0	1.0
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52786-52808	0	1.0
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52876-52898	0	1.0
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52174-52196	0	1.0
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52291-52313	0	1.0
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52831-52853	0	1.0
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53218-53240	0	1.0
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52786-52808	0	1.0
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52876-52898	0	1.0
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52921-52943	0	1.0
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52966-52997	0	1.0
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53083-53114	0	1.0
NC_014025_1	1.21\|53020\|41\|NC_014025\|CRT	53020-53060	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53020-53060	0	1.0
NC_014025_1	1.21\|53020\|41\|NC_014025\|CRT	53020-53060	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53137-53177	0	1.0
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52966-52997	0	1.0
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53083-53114	0	1.0
NC_014025_1	1.23\|53137\|41\|NC_014025\|CRT	53137-53177	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53020-53060	0	1.0
NC_014025_1	1.23\|53137\|41\|NC_014025\|CRT	53137-53177	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53137-53177	0	1.0
NC_014025_1	1.24\|53200\|50\|NC_014025\|CRT	53200-53249	50	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53200-53249	0	1.0
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53272-53294	0	1.0
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52327-52349	1	0.957
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52552-52574	1	0.957
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52777-52799	1	0.957
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52867-52889	1	0.957
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53263-53285	1	0.957
NC_014025_1	1.15\|52723\|41\|NC_014025\|CRT	52723-52763	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52399-52439	1	0.976
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51427-51449	1	0.957
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52048-52070	1	0.957
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52399-52421	1	0.957
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52345-52367	1	0.957
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52435-52457	1	0.957
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52813-52835	1	0.957
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52903-52925	1	0.957
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51508-51530	1	0.957
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51778-51800	1	0.957
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51940-51962	1	0.957
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52318-52340	1	0.957
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52471-52493	1	0.957
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52858-52880	1	0.957
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51427-51449	1	0.957
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52048-52070	1	0.957
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52399-52421	1	0.957
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51472-51494	1	0.957
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51625-51647	1	0.957
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51508-51530	1	0.957
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52471-52493	1	0.957
NC_014025_1	1.24\|53200\|50\|NC_014025\|CRT	53200-53249	50	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52156-52205	1	0.98
NC_014025_1	1.24\|53200\|50\|NC_014025\|CRT	53200-53249	50	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52273-52322	1	0.98
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52129-52151	1	0.957
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52246-52268	1	0.957
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52336-52358	1	0.957
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52660-52682	1	0.957
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52822-52844	1	0.957
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53056-53078	1	0.957
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53173-53195	1	0.957
NC_014025_1	1.10\|52354\|41\|NC_014025\|CRT	52354-52394	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52894-52934	2	0.951
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51418-51440	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51679-51701	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51841-51863	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52003-52025	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53011-53033	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53128-53150	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51742-51764	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51904-51926	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52183-52205	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52300-52322	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52390-52412	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52840-52862	2	0.913
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51886-51908	2	0.913
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52336-52358	2	0.913
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52372-52394	2	0.913
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52462-52484	2	0.913
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52489-52511	2	0.913
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52723-52745	2	0.913
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52912-52934	2	0.913
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51751-51773	2	0.913
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51913-51935	2	0.913
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	EU744250	Mycobacterium virus Pukovnik, complete genome	3156-3178	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51580-51602	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52363-52385	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52453-52475	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52768-52790	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51436-51458	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51661-51683	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52381-52403	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52705-52727	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52921-52943	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53254-53276	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53281-53303	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	122266-122288	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	MT586120	Synechococcus phage S-CAM7 isolate 0809CC03, complete genome	172741-172763	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	MT586120	Synechococcus phage S-CAM7 isolate 0809CC03, complete genome	172849-172871	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	MT586120	Synechococcus phage S-CAM7 isolate 0809CC03, complete genome	172894-172916	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	MT586120	Synechococcus phage S-CAM7 isolate 0809CC03, complete genome	172939-172961	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	MT586120	Synechococcus phage S-CAM7 isolate 0809CC03, complete genome	173260-173282	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_031927	Synechococcus phage S-CAM7 isolate 0910CC49, complete genome	171345-171367	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_031927	Synechococcus phage S-CAM7 isolate 0910CC49, complete genome	171453-171475	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_031927	Synechococcus phage S-CAM7 isolate 0910CC49, complete genome	171498-171520	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_031927	Synechococcus phage S-CAM7 isolate 0910CC49, complete genome	171543-171565	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_031927	Synechococcus phage S-CAM7 isolate 0910CC49, complete genome	171864-171886	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	KU686213	Synechococcus phage S-CAM7 isolate 0910SB42, complete genome	173367-173389	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	KU686213	Synechococcus phage S-CAM7 isolate 0910SB42, complete genome	173475-173497	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	KU686213	Synechococcus phage S-CAM7 isolate 0910SB42, complete genome	173520-173542	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	KU686213	Synechococcus phage S-CAM7 isolate 0910SB42, complete genome	173565-173587	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	KU686213	Synechococcus phage S-CAM7 isolate 0910SB42, complete genome	173886-173908	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	192335-192357	2	0.913
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	LC554890	Ralstonia phage RP13 DNA, nearly complete genome	96485-96507	2	0.913
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51886-51908	2	0.913
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52336-52358	2	0.913
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52372-52394	2	0.913
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52462-52484	2	0.913
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52489-52511	2	0.913
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52723-52745	2	0.913
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52912-52934	2	0.913
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51751-51773	2	0.913
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51913-51935	2	0.913
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	EU744250	Mycobacterium virus Pukovnik, complete genome	3156-3178	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51580-51602	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51436-51458	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51661-51683	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52174-52196	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52291-52313	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52381-52403	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52705-52727	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52831-52853	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53218-53240	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NZ_CP015352	Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence	24299-24321	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NZ_CP015352	Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence	24416-24438	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NZ_CP015352	Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence	24569-24591	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NZ_CP015352	Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence	24641-24663	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NZ_CP015352	Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence	24776-24798	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019095	Synechococcus phage ACG-2014f isolate Syn7803US34, complete genome	14758-14780	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019086	Synechococcus phage ACG-2014f isolate Syn7803US17, complete genome	14757-14779	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019106	Synechococcus phage ACG-2014f isolate Syn7803US50, complete genome	14539-14561	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019107	Synechococcus phage ACG-2014f isolate Syn7803US52, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019143	Synechococcus phage ACG-2014f isolate Syn7803C12, complete genome	14529-14551	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019103	Synechococcus phage ACG-2014f isolate Syn7803US44, complete genome	15063-15085	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019102	Synechococcus phage ACG-2014f isolate Syn7803US43, complete genome	14538-14560	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019066	Synechococcus phage ACG-2014f isolate Syn7803C9, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019149	Synechococcus phage ACG-2014f isolate Syn7803C21, complete genome	14539-14561	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019105	Synechococcus phage ACG-2014f isolate Syn7803US4, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019098	Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome	14529-14551	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019159	Synechococcus phage ACG-2014f isolate Syn7803C34, complete genome	14757-14779	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019111	Synechococcus phage ACG-2014f isolate Syn7803US57, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019148	Synechococcus phage ACG-2014f isolate Syn7803C19, complete genome	14539-14561	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_047712	Synechococcus phage ACG-2014f isolate Syn7803C7, complete genome	14538-14560	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019090	Synechococcus phage ACG-2014f isolate Syn7803US24, complete genome	14745-14767	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019146	Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome	14522-14544	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019152	Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome	14538-14560	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019151	Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome	14525-14547	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019150	Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_026927	Synechococcus phage ACG-2014f isolate Syn7803C90, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019097	Synechococcus phage ACG-2014f isolate Syn7803US37, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019045	Synechococcus phage ACG-2014f isolate Syn7803C6, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019037	Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019099	Synechococcus phage ACG-2014f isolate Syn7803US3, complete genome	14529-14551	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019155	Synechococcus phage ACG-2014f isolate Syn7803C29, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019053	Synechococcus phage ACG-2014f isolate Syn7803C80, complete genome	14529-14551	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019101	Synechococcus phage ACG-2014f isolate Syn7803US42, complete genome	15622-15644	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019085	Synechococcus phage ACG-2014f isolate Syn7803US13, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019096	Synechococcus phage ACG-2014f isolate Syn7803US36, complete genome	15179-15201	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019091	Synechococcus phage ACG-2014f isolate Syn7803US26, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019144	Synechococcus phage ACG-2014f isolate Syn7803C14, complete genome	14526-14548	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019145	Synechococcus phage ACG-2014f isolate Syn7803C15, complete genome	14487-14509	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	KJ019092	Synechococcus phage ACG-2014f isolate Syn7803US2, complete genome	14529-14551	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	188-210	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	692-714	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	881-903	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	1349-1371	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	732982-733004	2	0.913
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	733090-733112	2	0.913
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52156-52187	2	0.938
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52273-52304	2	0.938
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52687-52718	2	0.938
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53200-53231	2	0.938
NC_014025_1	1.21\|53020\|41\|NC_014025\|CRT	53020-53060	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52093-52133	2	0.951
NC_014025_1	1.21\|53020\|41\|NC_014025\|CRT	53020-53060	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52210-52250	2	0.951
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52156-52187	2	0.938
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52273-52304	2	0.938
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52687-52718	2	0.938
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53200-53231	2	0.938
NC_014025_1	1.23\|53137\|41\|NC_014025\|CRT	53137-53177	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52093-52133	2	0.951
NC_014025_1	1.23\|53137\|41\|NC_014025\|CRT	53137-53177	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52210-52250	2	0.951
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52165-52187	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52282-52304	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52309-52331	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52849-52871	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52939-52961	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53209-53231	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53245-53267	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51769-51791	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51850-51872	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51886-51908	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51931-51953	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52012-52034	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52354-52376	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52372-52394	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52444-52466	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52462-52484	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52804-52826	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52894-52916	2	0.913
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52912-52934	2	0.913
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52705-52727	3	0.87
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	NC_013085	Synechococcus phage S-RSM4, complete genome	104973-104995	3	0.87
NC_014025_1	1.13\|52597\|23\|NC_014025\|CRT	52597-52619	23	FM207411	Synechococcus phage S-RSM4 complete genome	104973-104995	3	0.87
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52309-52331	3	0.87
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52849-52871	3	0.87
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52939-52961	3	0.87
NC_014025_1	1.16\|52786\|23\|NC_014025\|CRT	52786-52808	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53245-53267	3	0.87
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51841-51863	3	0.87
NC_014025_1	1.17\|52831\|23\|NC_014025\|CRT	52831-52853	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52003-52025	3	0.87
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52309-52331	3	0.87
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52849-52871	3	0.87
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52939-52961	3	0.87
NC_014025_1	1.18\|52876\|23\|NC_014025\|CRT	52876-52898	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53245-53267	3	0.87
NC_014025_1	1.19\|52921\|23\|NC_014025\|CRT	52921-52943	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53299-53321	3	0.87
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52597-52628	3	0.906
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52597-52628	3	0.906
NC_014025_1	1.25\|53272\|23\|NC_014025\|CRT	53272-53294	23	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52426-52448	3	0.87
NC_014025_1	1.10\|52354\|41\|NC_014025\|CRT	52354-52394	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52822-52862	5	0.878
NC_014025_1	1.15\|52723\|41\|NC_014025\|CRT	52723-52763	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52048-52088	5	0.878
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_014172	Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence	29931-29962	5	0.844
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	124637-124668	5	0.844
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	124997-125028	5	0.844
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_014172	Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence	29931-29962	5	0.844
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	124637-124668	5	0.844
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	124997-125028	5	0.844
NC_014025_1	1.10\|52354\|41\|NC_014025\|CRT	52354-52394	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52165-52205	6	0.854
NC_014025_1	1.10\|52354\|41\|NC_014025\|CRT	52354-52394	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52282-52322	6	0.854
NC_014025_1	1.15\|52723\|41\|NC_014025\|CRT	52723-52763	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51751-51791	6	0.854
NC_014025_1	1.15\|52723\|41\|NC_014025\|CRT	52723-52763	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51913-51953	6	0.854
NC_014025_1	1.15\|52723\|41\|NC_014025\|CRT	52723-52763	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52786-52826	6	0.854
NC_014025_1	1.15\|52723\|41\|NC_014025\|CRT	52723-52763	41	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52876-52916	6	0.854
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_014172	Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence	29832-29863	6	0.812
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	124142-124173	6	0.812
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	124304-124335	6	0.812
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	124880-124911	6	0.812
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	NZ_CP016317	Bacillus cereus strain M3 plasmid pBCM301, complete sequence	156426-156457	6	0.812
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_014172	Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence	29832-29863	6	0.812
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	124142-124173	6	0.812
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	124304-124335	6	0.812
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	124880-124911	6	0.812
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	NZ_CP016317	Bacillus cereus strain M3 plasmid pBCM301, complete sequence	156426-156457	6	0.812
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	MN204498	Streptomyces phage Saftant, complete genome	18776-18807	7	0.781
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	MN204498	Streptomyces phage Saftant, complete genome	18776-18807	7	0.781
NC_014025_1	1.9\|52264\|68\|NC_014025\|CRT	52264-52331	68	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52264-52331	8	0.882
NC_014025_1	1.9\|52264\|68\|NC_014025\|CRT	52264-52331	68	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52147-52214	8	0.882
NC_014025_1	1.11\|52417\|68\|NC_014025\|CRT	52417-52484	68	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52417-52484	8	0.882
NC_014025_1	1.12\|52507\|68\|NC_014025\|CRT	52507-52574	68	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52507-52574	8	0.882
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	MN224566	Mycobacterium phage Herbertwm, complete genome	2975-3006	8	0.75
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	AP013956	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S27-C232, * SEQUENCING IN PROGRESS *	1385-1416	8	0.75
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	AP013963	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S38-C146, * SEQUENCING IN PROGRESS *	1385-1416	8	0.75
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	AP013959	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S31-C107, * SEQUENCING IN PROGRESS *	11067-11098	8	0.75
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	AP013565	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C5F-MedDCM-OCT-S40-C10, * SEQUENCING IN PROGRESS *, 2 ordered pieces	40126-40157	8	0.75
NC_014025_1	1.20\|52966\|32\|NC_014025\|CRT	52966-52997	32	AP013961	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S34-C156, * SEQUENCING IN PROGRESS *	1357-1388	8	0.75
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	MN224566	Mycobacterium phage Herbertwm, complete genome	2975-3006	8	0.75
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	AP013956	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S27-C232, * SEQUENCING IN PROGRESS *	1385-1416	8	0.75
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	AP013963	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S38-C146, * SEQUENCING IN PROGRESS *	1385-1416	8	0.75
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	AP013959	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S31-C107, * SEQUENCING IN PROGRESS *	11067-11098	8	0.75
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	AP013565	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C5F-MedDCM-OCT-S40-C10, * SEQUENCING IN PROGRESS *, 2 ordered pieces	40126-40157	8	0.75
NC_014025_1	1.22\|53083\|32\|NC_014025\|CRT	53083-53114	32	AP013961	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S34-C156, * SEQUENCING IN PROGRESS *	1357-1388	8	0.75
NC_014025_1	1.9\|52264\|68\|NC_014025\|CRT	52264-52331	68	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	53191-53258	9	0.868
NC_014025_1	1.24\|53200\|50\|NC_014025\|CRT	53200-53249	50	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52453-52502	9	0.82
NC_014025_1	1.3\|51706\|77\|NC_014025\|CRT	51706-51782	77	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51706-51782	17	0.779
NC_014025_1	1.4\|51805\|77\|NC_014025\|CRT	51805-51881	77	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51805-51881	17	0.779
NC_014025_1	1.4\|51805\|77\|NC_014025\|CRT	51805-51881	77	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51967-52043	17	0.779
NC_014025_1	1.5\|51904\|77\|NC_014025\|CRT	51904-51980	77	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51742-51818	17	0.779
NC_014025_1	1.5\|51904\|77\|NC_014025\|CRT	51904-51980	77	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51904-51980	17	0.779
NC_014025_1	1.7\|52084\|77\|NC_014025\|CRT	52084-52160	77	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52084-52160	17	0.779
NC_014025_1	1.7\|52084\|77\|NC_014025\|CRT	52084-52160	77	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	52201-52277	19	0.753
NC_014025_1	1.1\|51481\|86\|NC_014025\|CRT	51481-51566	86	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51481-51566	26	0.698
NC_014025_1	1.2\|51589\|95\|NC_014025\|CRT	51589-51683	95	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	51589-51683	35	0.632

1. spacer 1.6|52003|59|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tcactggaatcactggagctactggaatcactggagtgacgggaatcactggagctacc	CRISPR spacer
tcactggaatcactggagctactggaatcactggagtgacgggaatcactggagctacc	Protospacer
***********************************************************

2. spacer 1.6|52003|59|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tcactggaatcactggagctactggaatcactggagtgacgggaatcactggagctacc	CRISPR spacer
tcactggaatcactggagctactggaatcactggagtgacgggaatcactggagctacc	Protospacer
***********************************************************

3. spacer 1.8|52183|59|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tcactggagctactggagctaccggaattaccggagttactggaattaccggagttact	CRISPR spacer
tcactggagctactggagctaccggaattaccggagttactggaattaccggagttact	Protospacer
***********************************************************

4. spacer 1.10|52354|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tcactggagctaccgggatcactggagctaccggagtcact	CRISPR spacer
tcactggagctaccgggatcactggagctaccggagtcact	Protospacer
*****************************************

5. spacer 1.10|52354|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tcactggagctaccgggatcactggagctaccggagtcact	CRISPR spacer
tcactggagctaccgggatcactggagctaccggagtcact	Protospacer
*****************************************

6. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tcactggagtcactggagctacc	CRISPR spacer
tcactggagtcactggagctacc	Protospacer
***********************

7. spacer 1.14|52642|59|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ttactggaattaccggagtgactggagttaccggaatcactggagtgacaggagccact	CRISPR spacer
ttactggaattaccggagtgactggagttaccggaatcactggagtgacaggagccact	Protospacer
***********************************************************

8. spacer 1.15|52723|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ctactggagttaccggagtcacgggagctaccggagctacc	CRISPR spacer
ctactggagttaccggagtcacgggagctaccggagctacc	Protospacer
*****************************************

9. spacer 1.15|52723|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ctactggagttaccggagtcacgggagctaccggagctacc	CRISPR spacer
ctactggagttaccggagtcacgggagctaccggagctacc	Protospacer
*****************************************

10. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ttactggagctaccggagtcacg	CRISPR spacer
ttactggagctaccggagtcacg	Protospacer
***********************

11. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ttactggagctaccggagtcacg	CRISPR spacer
ttactggagctaccggagtcacg	Protospacer
***********************

12. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagctact	Protospacer
***********************

13. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagctact	Protospacer
***********************

14. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagctact	Protospacer
***********************

15. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagctact	Protospacer
***********************

16. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ttactggagctaccggagtcacg	CRISPR spacer
ttactggagctaccggagtcacg	Protospacer
***********************

17. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ttactggagctaccggagtcacg	CRISPR spacer
ttactggagctaccggagtcacg	Protospacer
***********************

18. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagtcactggggctact	Protospacer
***********************

19. spacer 1.20|52966|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctaccggagttact	Protospacer
********************************

20. spacer 1.20|52966|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctaccggagttact	Protospacer
********************************

21. spacer 1.21|53020|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tcactggagttactggaattaccggagttactggagtgact	CRISPR spacer
tcactggagttactggaattaccggagttactggagtgact	Protospacer
*****************************************

22. spacer 1.21|53020|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tcactggagttactggaattaccggagttactggagtgact	CRISPR spacer
tcactggagttactggaattaccggagttactggagtgact	Protospacer
*****************************************

23. spacer 1.22|53083|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctaccggagttact	Protospacer
********************************

24. spacer 1.22|53083|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctaccggagttact	Protospacer
********************************

25. spacer 1.23|53137|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tcactggagttactggaattaccggagttactggagtgact	CRISPR spacer
tcactggagttactggaattaccggagttactggagtgact	Protospacer
*****************************************

26. spacer 1.23|53137|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tcactggagttactggaattaccggagttactggagtgact	CRISPR spacer
tcactggagttactggaattaccggagttactggagtgact	Protospacer
*****************************************

27. spacer 1.24|53200|50|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tgacaggagccactggagctaccggaatcactggagctactggagctact	CRISPR spacer
tgacaggagccactggagctaccggaatcactggagctactggagctact	Protospacer
**************************************************

28. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 0, identity: 1.0

tgactggagctaccggaatcact	CRISPR spacer
tgactggagctaccggaatcact	Protospacer
***********************

29. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tcactggagtcactggagctacc	CRISPR spacer
tcactggagttactggagctacc	Protospacer
**********.************

30. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tcactggagtcactggagctacc	CRISPR spacer
tcactggagtcacgggagctacc	Protospacer
************* *********

31. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tcactggagtcactggagctacc	CRISPR spacer
tcactggagttactggagctacc	Protospacer
**********.************

32. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tcactggagtcactggagctacc	CRISPR spacer
tcactggagttactggagctacc	Protospacer
**********.************

33. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tcactggagtcactggagctacc	CRISPR spacer
tcactggagtgactggagctacc	Protospacer
********** ************

34. spacer 1.15|52723|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.976

ctactggagttaccggagtcacgggagctaccggagctacc	CRISPR spacer
ttactggagttaccggagtcacgggagctaccggagctacc	Protospacer
.****************************************

35. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcacg	Protospacer
*.*********************

36. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcacg	Protospacer
*.*********************

37. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ttactggagctaccggagtcacg	CRISPR spacer
ttactggagttaccggagtcacg	Protospacer
*********.*************

38. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagctacc	Protospacer
**********************.

39. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagctacc	Protospacer
**********************.

40. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagctacc	Protospacer
**********************.

41. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagctacc	Protospacer
**********************.

42. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggaatcactggagctact	CRISPR spacer
ctaccggagtcactggagctact	Protospacer
********.**************

43. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagttact	Protospacer
******************.****

44. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagttact	Protospacer
******************.****

45. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagttact	Protospacer
******************.****

46. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggaatcactggagctact	CRISPR spacer
ctaccggagtcactggagctact	Protospacer
********.**************

47. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagttact	Protospacer
******************.****

48. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcacg	Protospacer
*.*********************

49. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcacg	Protospacer
*.*********************

50. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ttactggagctaccggagtcacg	CRISPR spacer
ttactggagttaccggagtcacg	Protospacer
*********.*************

51. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggagtcactggggctact	CRISPR spacer
ttaccggagtcactggggctact	Protospacer
.**********************

52. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggagtcactggggctact	CRISPR spacer
ttaccggagtcactggggctact	Protospacer
.**********************

53. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagtcactggagctact	Protospacer
****************.******

54. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagtcactggagctact	Protospacer
****************.******

55. spacer 1.24|53200|50|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.98

tgacaggagccactggagctaccggaatcactggagctactggagctact	CRISPR spacer
tgacaggagccactggagctaccggaatcactggagctactggagctacc	Protospacer
*************************************************.

56. spacer 1.24|53200|50|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.98

tgacaggagccactggagctaccggaatcactggagctactggagctact	CRISPR spacer
tgacaggagccactggagctaccggaatcactggagctactggagctacc	Protospacer
*************************************************.

57. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tgactggagctaccggaatcact	CRISPR spacer
tgactggagttaccggaatcact	Protospacer
*********.*************

58. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tgactggagctaccggaatcact	CRISPR spacer
tgactggagttaccggaatcact	Protospacer
*********.*************

59. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tgactggagctaccggaatcact	CRISPR spacer
ttactggagctaccggaatcact	Protospacer
* *********************

60. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tgactggagctaccggaatcact	CRISPR spacer
tgactggagttaccggaatcact	Protospacer
*********.*************

61. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tgactggagctaccggaatcact	CRISPR spacer
tcactggagctaccggaatcact	Protospacer
* *********************

62. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tgactggagctaccggaatcact	CRISPR spacer
tgactggagttaccggaatcact	Protospacer
*********.*************

63. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.957

tgactggagctaccggaatcact	CRISPR spacer
tgactggagttaccggaatcact	Protospacer
*********.*************

64. spacer 1.10|52354|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.951

tcactggagctaccgggatcactggagctaccggagtcact	CRISPR spacer
tcacgggagctaccggaatcactggagctaccggagtcact	Protospacer
**** ***********.************************

65. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
ccactggaatcactggagctacc	Protospacer
.*******.**************

66. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
ccactggaatcactggagctacc	Protospacer
.*******.**************

67. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
tcactggaatcactggagctact	Protospacer
********.*************.

68. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
tcactggaatcactggagctact	Protospacer
********.*************.

69. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
tcactggagtcactggagttact	Protospacer
******************.***.

70. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
tcactggagtcactggagttact	Protospacer
******************.***.

71. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
tcactggagtgactggagttacc	Protospacer
********** *******.****

72. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
tcactggagtgactggagttacc	Protospacer
********** *******.****

73. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
tcactggagctactggagctacc	Protospacer
*********..************

74. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
tcactggagctactggagctacc	Protospacer
*********..************

75. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
tcactggagttactggagttacc	Protospacer
**********.*******.****

76. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tcactggagtcactggagctacc	CRISPR spacer
tcactggagctactggagctacc	Protospacer
*********..************

77. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
*.********************

78. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
ttactggagctaccggaatcact	Protospacer
*****************.****

79. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
*.********************

80. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
*.********************

81. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagttaccggagtcacg	Protospacer
.********.*************

82. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagttaccggagtcacg	Protospacer
.********.*************

83. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
*.********************

84. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tgactggagttaccggagtcacg	Protospacer
* *******.*************

85. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tgactggagttaccggagtcacg	Protospacer
* *******.*************

86. spacer 1.16|52786|23|NC_014025|CRT matches to EU744250 (Mycobacterium virus Pukovnik, complete genome) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
ttaccggagctaccggaggcacg	Protospacer
****.************* ****

87. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ttaccggagtcactggagctact	Protospacer
.*******.**************

88. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctaccgggatcactggagctacc	Protospacer
*******.**************.

89. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctaccgggatcactggagctacc	Protospacer
*******.**************.

90. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ttaccggaatcactggagttact	Protospacer
.*****************.****

91. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctaccggagtcacgggagctact	Protospacer
********.**** *********

92. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctaccggagtcactggagccact	Protospacer
********.**********.***

93. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctaccggagtcactggagttact	Protospacer
********.*********.****

94. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggagtcactggagctact	Protospacer
****.***.**************

95. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctaccggagtcactggggctact	Protospacer
********.*******.******

96. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagtgact	Protospacer
******************. ***

97. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaatcactggagtgact	Protospacer
******************. ***

98. spacer 1.17|52831|23|NC_014025|CRT matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggaataactggagctact	Protospacer
****.***** ************

99. spacer 1.17|52831|23|NC_014025|CRT matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

100. spacer 1.17|52831|23|NC_014025|CRT matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

101. spacer 1.17|52831|23|NC_014025|CRT matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

102. spacer 1.17|52831|23|NC_014025|CRT matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

103. spacer 1.17|52831|23|NC_014025|CRT matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

104. spacer 1.17|52831|23|NC_014025|CRT matches to NC_031927 (Synechococcus phage S-CAM7 isolate 0910CC49, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

105. spacer 1.17|52831|23|NC_014025|CRT matches to NC_031927 (Synechococcus phage S-CAM7 isolate 0910CC49, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

106. spacer 1.17|52831|23|NC_014025|CRT matches to NC_031927 (Synechococcus phage S-CAM7 isolate 0910CC49, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

107. spacer 1.17|52831|23|NC_014025|CRT matches to NC_031927 (Synechococcus phage S-CAM7 isolate 0910CC49, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

108. spacer 1.17|52831|23|NC_014025|CRT matches to NC_031927 (Synechococcus phage S-CAM7 isolate 0910CC49, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

109. spacer 1.17|52831|23|NC_014025|CRT matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

110. spacer 1.17|52831|23|NC_014025|CRT matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

111. spacer 1.17|52831|23|NC_014025|CRT matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

112. spacer 1.17|52831|23|NC_014025|CRT matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

113. spacer 1.17|52831|23|NC_014025|CRT matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctactggactcactggagctact	Protospacer
****.*** **************

114. spacer 1.17|52831|23|NC_014025|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctaccggaaacactggacctact	Protospacer
********* ******* *****

115. spacer 1.17|52831|23|NC_014025|CRT matches to LC554890 (Ralstonia phage RP13 DNA, nearly complete genome) position: , mismatch: 2, identity: 0.913

ctaccggaatcactggagctact	CRISPR spacer
ctgctggaatcactggagctact	Protospacer
**.*.******************

116. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
*.********************

117. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
ttactggagctaccggaatcact	Protospacer
*****************.****

118. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
*.********************

119. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
*.********************

120. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagttaccggagtcacg	Protospacer
.********.*************

121. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagttaccggagtcacg	Protospacer
.********.*************

122. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
*.********************

123. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tgactggagttaccggagtcacg	Protospacer
* *******.*************

124. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
tgactggagttaccggagtcacg	Protospacer
* *******.*************

125. spacer 1.18|52876|23|NC_014025|CRT matches to EU744250 (Mycobacterium virus Pukovnik, complete genome) position: , mismatch: 2, identity: 0.913

ttactggagctaccggagtcacg	CRISPR spacer
ttaccggagctaccggaggcacg	Protospacer
****.************* ****

126. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ttaccggagtcactggagctact	Protospacer
.***************.******

127. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagtcacgggagctact	Protospacer
************* **.******

128. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagtcactggagccact	Protospacer
****************.**.***

129. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggaatcactggagctact	Protospacer
********.*******.******

130. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggaatcactggagctact	Protospacer
********.*******.******

131. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagtcactggagttact	Protospacer
****************.*.****

132. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctactggagtcactggagctact	Protospacer
****.***********.******

133. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggaatcactggagctact	Protospacer
********.*******.******

134. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggaatcactggagctact	Protospacer
********.*******.******

135. spacer 1.19|52921|23|NC_014025|CRT matches to NZ_CP015352 (Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagttactggggctacc	Protospacer
**********.***********.

136. spacer 1.19|52921|23|NC_014025|CRT matches to NZ_CP015352 (Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagttactggggctacc	Protospacer
**********.***********.

137. spacer 1.19|52921|23|NC_014025|CRT matches to NZ_CP015352 (Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagttactggggctacc	Protospacer
**********.***********.

138. spacer 1.19|52921|23|NC_014025|CRT matches to NZ_CP015352 (Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagttactggggctacc	Protospacer
**********.***********.

139. spacer 1.19|52921|23|NC_014025|CRT matches to NZ_CP015352 (Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagttactggggctacc	Protospacer
**********.***********.

140. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019095 (Synechococcus phage ACG-2014f isolate Syn7803US34, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

141. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019086 (Synechococcus phage ACG-2014f isolate Syn7803US17, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

142. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019106 (Synechococcus phage ACG-2014f isolate Syn7803US50, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

143. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019107 (Synechococcus phage ACG-2014f isolate Syn7803US52, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

144. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019143 (Synechococcus phage ACG-2014f isolate Syn7803C12, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

145. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019103 (Synechococcus phage ACG-2014f isolate Syn7803US44, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

146. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019102 (Synechococcus phage ACG-2014f isolate Syn7803US43, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

147. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019066 (Synechococcus phage ACG-2014f isolate Syn7803C9, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

148. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019149 (Synechococcus phage ACG-2014f isolate Syn7803C21, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

149. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019105 (Synechococcus phage ACG-2014f isolate Syn7803US4, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

150. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019098 (Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

151. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019159 (Synechococcus phage ACG-2014f isolate Syn7803C34, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

152. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019111 (Synechococcus phage ACG-2014f isolate Syn7803US57, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

153. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019148 (Synechococcus phage ACG-2014f isolate Syn7803C19, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

154. spacer 1.19|52921|23|NC_014025|CRT matches to NC_047712 (Synechococcus phage ACG-2014f isolate Syn7803C7, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

155. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019090 (Synechococcus phage ACG-2014f isolate Syn7803US24, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

156. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019146 (Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

157. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019152 (Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

158. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019151 (Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

159. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019150 (Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

160. spacer 1.19|52921|23|NC_014025|CRT matches to NC_026927 (Synechococcus phage ACG-2014f isolate Syn7803C90, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

161. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019097 (Synechococcus phage ACG-2014f isolate Syn7803US37, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

162. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019045 (Synechococcus phage ACG-2014f isolate Syn7803C6, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

163. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019037 (Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

164. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019099 (Synechococcus phage ACG-2014f isolate Syn7803US3, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

165. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019155 (Synechococcus phage ACG-2014f isolate Syn7803C29, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

166. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019053 (Synechococcus phage ACG-2014f isolate Syn7803C80, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

167. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019101 (Synechococcus phage ACG-2014f isolate Syn7803US42, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

168. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019085 (Synechococcus phage ACG-2014f isolate Syn7803US13, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

169. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019096 (Synechococcus phage ACG-2014f isolate Syn7803US36, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

170. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019091 (Synechococcus phage ACG-2014f isolate Syn7803US26, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

171. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019144 (Synechococcus phage ACG-2014f isolate Syn7803C14, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

172. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019145 (Synechococcus phage ACG-2014f isolate Syn7803C15, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

173. spacer 1.19|52921|23|NC_014025|CRT matches to KJ019092 (Synechococcus phage ACG-2014f isolate Syn7803US2, complete genome) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagccactggtgctact	Protospacer
*********.****** ******

174. spacer 1.19|52921|23|NC_014025|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagacactggcgctact	Protospacer
********* ****** ******

175. spacer 1.19|52921|23|NC_014025|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagacactggcgctact	Protospacer
********* ****** ******

176. spacer 1.19|52921|23|NC_014025|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagacactggcgctact	Protospacer
********* ****** ******

177. spacer 1.19|52921|23|NC_014025|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagacactggcgctact	Protospacer
********* ****** ******

178. spacer 1.19|52921|23|NC_014025|CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagacactggtgctact	Protospacer
********* ****** ******

179. spacer 1.19|52921|23|NC_014025|CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.913

ctaccggagtcactggggctact	CRISPR spacer
ctaccggagacactggcgctact	Protospacer
********* ****** ******

180. spacer 1.20|52966|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.938

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctaccggaatcact	Protospacer
**************************.*.***

181. spacer 1.20|52966|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.938

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctaccggaatcact	Protospacer
**************************.*.***

182. spacer 1.20|52966|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.938

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctactggagtcact	Protospacer
**********************.*****.***

183. spacer 1.20|52966|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.938

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctaccggaatcact	Protospacer
**************************.*.***

184. spacer 1.21|53020|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.951

tcactggagttactggaattaccggagttactggagtgact	CRISPR spacer
ttaccggagttactggaattaccggagttactggagtgact	Protospacer
*.**.************************************

185. spacer 1.21|53020|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.951

tcactggagttactggaattaccggagttactggagtgact	CRISPR spacer
ttaccggagttactggaattaccggagttactggagtgact	Protospacer
*.**.************************************

186. spacer 1.22|53083|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.938

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctaccggaatcact	Protospacer
**************************.*.***

187. spacer 1.22|53083|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.938

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctaccggaatcact	Protospacer
**************************.*.***

188. spacer 1.22|53083|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.938

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctactggagtcact	Protospacer
**********************.*****.***

189. spacer 1.22|53083|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.938

tgacaggagccactggagctaccggagttact	CRISPR spacer
tgacaggagccactggagctaccggaatcact	Protospacer
**************************.*.***

190. spacer 1.23|53137|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.951

tcactggagttactggaattaccggagttactggagtgact	CRISPR spacer
ttaccggagttactggaattaccggagttactggagtgact	Protospacer
*.**.************************************

191. spacer 1.23|53137|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.951

tcactggagttactggaattaccggagttactggagtgact	CRISPR spacer
ttaccggagttactggaattaccggagttactggagtgact	Protospacer
*.**.************************************

192. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
ccactggagctaccggaatcact	Protospacer
. *********************

193. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
ccactggagctaccggaatcact	Protospacer
. *********************

194. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
. *********************

195. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
. *********************

196. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
. *********************

197. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
ccactggagctaccggaatcact	Protospacer
. *********************

198. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
. *********************

199. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcacgggagctaccggaatcact	Protospacer
* ** ******************

200. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcactggagctactggaatcact	Protospacer
* ***********.*********

201. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
* ***************.*****

202. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcacgggagctaccggaatcact	Protospacer
* ** ******************

203. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcactggagctactggaatcact	Protospacer
* ***********.*********

204. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcactggagctaccgggatcact	Protospacer
* **************.******

205. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
* ***************.*****

206. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcactggagctaccgggatcact	Protospacer
* **************.******

207. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
* ***************.*****

208. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcacgggagctaccggaatcact	Protospacer
* ** ******************

209. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcacgggagctaccggaatcact	Protospacer
* ** ******************

210. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 2, identity: 0.913

tgactggagctaccggaatcact	CRISPR spacer
tcactggagctaccggagtcact	Protospacer
* ***************.*****

211. spacer 1.13|52597|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

tcactggagtcactggagctacc	CRISPR spacer
ctactggagtcactggagctact	Protospacer
..********************.

212. spacer 1.13|52597|23|NC_014025|CRT matches to NC_013085 (Synechococcus phage S-RSM4, complete genome) position: , mismatch: 3, identity: 0.87

tcactggagtcactggagctacc	CRISPR spacer
acacaggagtcactggagctact	Protospacer
 *** *****************.

213. spacer 1.13|52597|23|NC_014025|CRT matches to FM207411 (Synechococcus phage S-RSM4 complete genome) position: , mismatch: 3, identity: 0.87

tcactggagtcactggagctacc	CRISPR spacer
acacaggagtcactggagctact	Protospacer
 *** *****************.

214. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
.****************.****

215. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
.****************.****

216. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
.****************.****

217. spacer 1.16|52786|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
.****************.****

218. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ctaccggaatcactggagctact	CRISPR spacer
tcactggaatcactggagctact	Protospacer
..**.******************

219. spacer 1.17|52831|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ctaccggaatcactggagctact	CRISPR spacer
tcactggaatcactggagctact	Protospacer
..**.******************

220. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
.****************.****

221. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
.****************.****

222. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
.****************.****

223. spacer 1.18|52876|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ttactggagctaccggagtcacg	CRISPR spacer
ctactggagctaccggaatcact	Protospacer
.****************.****

224. spacer 1.19|52921|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

ctaccggagtcactggggctact	CRISPR spacer
tgactggagtcactggggctact	Protospacer
. **.******************

225. spacer 1.20|52966|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.906

tgacaggagccactggagctaccggagttact	CRISPR spacer
tcactggagtcactggagctaccggagttact	Protospacer
* ** ****.**********************

226. spacer 1.22|53083|32|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.906

tgacaggagccactggagctaccggagttact	CRISPR spacer
tcactggagtcactggagctaccggagttact	Protospacer
* ** ****.**********************

227. spacer 1.25|53272|23|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 3, identity: 0.87

tgactggagctaccggaatcact	CRISPR spacer
ctaccggagctaccggaatcact	Protospacer
. **.******************

228. spacer 1.10|52354|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 5, identity: 0.878

tcactggagctaccgggatcactggagctaccggagtcact	CRISPR spacer
tcactggagctaccggaatcactggagctactggagctacc	Protospacer
****************.**************.****..**.

229. spacer 1.15|52723|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 5, identity: 0.878

ctactggagttaccggagtcacgggagctaccggagctacc	CRISPR spacer
tcactggagctaccggagtcacgggagctaccggagttact	Protospacer
..*******.**************************.***.

230. spacer 1.20|52966|32|NC_014025|CRT matches to NC_014172 (Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence) position: , mismatch: 5, identity: 0.844

tgacaggagccactggagctaccggagttact	CRISPR spacer
ctacaggagccactggttctaccggagttaca	Protospacer
. **************  *************

231. spacer 1.20|52966|32|NC_014025|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 5, identity: 0.844

tgacaggagccactggagctaccggagttact	CRISPR spacer
ctacaggagccactggttctaccggagttaca	Protospacer
. **************  *************

232. spacer 1.20|52966|32|NC_014025|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 5, identity: 0.844

tgacaggagccactggagctaccggagttact	CRISPR spacer
ctacaggagccactggttctaccggagttaca	Protospacer
. **************  *************

233. spacer 1.22|53083|32|NC_014025|CRT matches to NC_014172 (Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence) position: , mismatch: 5, identity: 0.844

tgacaggagccactggagctaccggagttact	CRISPR spacer
ctacaggagccactggttctaccggagttaca	Protospacer
. **************  *************

234. spacer 1.22|53083|32|NC_014025|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 5, identity: 0.844

tgacaggagccactggagctaccggagttact	CRISPR spacer
ctacaggagccactggttctaccggagttaca	Protospacer
. **************  *************

235. spacer 1.22|53083|32|NC_014025|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 5, identity: 0.844

tgacaggagccactggagctaccggagttact	CRISPR spacer
ctacaggagccactggttctaccggagttaca	Protospacer
. **************  *************

236. spacer 1.10|52354|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 6, identity: 0.854

tcactggagctaccgggatcactggagctaccggagtcact	CRISPR spacer
ccactggagctaccggaatcactggagctactggagctacc	Protospacer
.***************.**************.****..**.

237. spacer 1.10|52354|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 6, identity: 0.854

tcactggagctaccgggatcactggagctaccggagtcact	CRISPR spacer
ccactggagctaccggaatcactggagctactggagctacc	Protospacer
.***************.**************.****..**.

238. spacer 1.15|52723|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 6, identity: 0.854

ctactggagttaccggagtcacgggagctaccggagctacc	CRISPR spacer
tgactggagttaccggagtcacgggagctaccggaatcact	Protospacer
. *********************************...**.

239. spacer 1.15|52723|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 6, identity: 0.854

ctactggagttaccggagtcacgggagctaccggagctacc	CRISPR spacer
tgactggagttaccggagtcacgggagctaccggaatcact	Protospacer
. *********************************...**.

240. spacer 1.15|52723|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 6, identity: 0.854

ctactggagttaccggagtcacgggagctaccggagctacc	CRISPR spacer
ttactggagctaccggagtcacgggagctaccggaatcact	Protospacer
.********.*************************...**.

241. spacer 1.15|52723|41|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 6, identity: 0.854

ctactggagttaccggagtcacgggagctaccggagctacc	CRISPR spacer
ttactggagctaccggagtcacgggagctaccggaatcact	Protospacer
.********.*************************...**.

242. spacer 1.20|52966|32|NC_014025|CRT matches to NC_014172 (Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence) position: , mismatch: 6, identity: 0.812

tgacaggagccactggagctaccggagttact	CRISPR spacer
ttacaggacctactggagctaccggaacaact	Protospacer
* ****** *.***************.. ***

243. spacer 1.20|52966|32|NC_014025|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 6, identity: 0.812

tgacaggagccactggagctaccggagttact	CRISPR spacer
ttacaggacctactggagctaccggaacaact	Protospacer
* ****** *.***************.. ***

244. spacer 1.20|52966|32|NC_014025|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 6, identity: 0.812

tgacaggagccactggagctaccggagttact	CRISPR spacer
ttacaggacctactggagctaccggaacaact	Protospacer
* ****** *.***************.. ***

245. spacer 1.20|52966|32|NC_014025|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 6, identity: 0.812

tgacaggagccactggagctaccggagttact	CRISPR spacer
ttacaggacctactggagctaccggaacaact	Protospacer
* ****** *.***************.. ***

246. spacer 1.20|52966|32|NC_014025|CRT matches to NZ_CP016317 (Bacillus cereus strain M3 plasmid pBCM301, complete sequence) position: , mismatch: 6, identity: 0.812

tgacaggagccactggagctaccggagttact	CRISPR spacer
ttacaggacctactggagctaccggaacaact	Protospacer
* ****** *.***************.. ***

247. spacer 1.22|53083|32|NC_014025|CRT matches to NC_014172 (Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence) position: , mismatch: 6, identity: 0.812

tgacaggagccactggagctaccggagttact	CRISPR spacer
ttacaggacctactggagctaccggaacaact	Protospacer
* ****** *.***************.. ***

248. spacer 1.22|53083|32|NC_014025|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 6, identity: 0.812

tgacaggagccactggagctaccggagttact	CRISPR spacer
ttacaggacctactggagctaccggaacaact	Protospacer
* ****** *.***************.. ***

249. spacer 1.22|53083|32|NC_014025|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 6, identity: 0.812

tgacaggagccactggagctaccggagttact	CRISPR spacer
ttacaggacctactggagctaccggaacaact	Protospacer
* ****** *.***************.. ***

250. spacer 1.22|53083|32|NC_014025|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 6, identity: 0.812

tgacaggagccactggagctaccggagttact	CRISPR spacer
ttacaggacctactggagctaccggaacaact	Protospacer
* ****** *.***************.. ***

251. spacer 1.22|53083|32|NC_014025|CRT matches to NZ_CP016317 (Bacillus cereus strain M3 plasmid pBCM301, complete sequence) position: , mismatch: 6, identity: 0.812

tgacaggagccactggagctaccggagttact	CRISPR spacer
ttacaggacctactggagctaccggaacaact	Protospacer
* ****** *.***************.. ***

252. spacer 1.20|52966|32|NC_014025|CRT matches to MN204498 (Streptomyces phage Saftant, complete genome) position: , mismatch: 7, identity: 0.781

tgacaggagccactggagctaccggagttact	CRISPR spacer
cgacaggagccactggcgctaccggcccggct	Protospacer
.*************** ********  . .**

253. spacer 1.22|53083|32|NC_014025|CRT matches to MN204498 (Streptomyces phage Saftant, complete genome) position: , mismatch: 7, identity: 0.781

tgacaggagccactggagctaccggagttact	CRISPR spacer
cgacaggagccactggcgctaccggcccggct	Protospacer
.*************** ********  . .**

254. spacer 1.9|52264|68|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 8, identity: 0.882

tcactggagtgacaggagccactggagctaccggaatcactggagctactggagctaccg	CRISPR spacer
tcactggagtgacaggagccactggagctaccggaatcactggagctactggagctaccg	Protospacer
************************************************************

255. spacer 1.9|52264|68|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 8, identity: 0.882

tcactggagtgacaggagccactggagctaccggaatcactggagctactggagctaccg	CRISPR spacer
tcactggagtgacaggagccactggagctaccggaatcactggagctactggagctaccg	Protospacer
************************************************************

256. spacer 1.11|52417|68|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 8, identity: 0.882

tcacgggagctaccggagctaccggaatcactggagctaccgggatcactggagctaccg	CRISPR spacer
tcacgggagctaccggagctaccggaatcactggagctaccgggatcactggagctaccg	Protospacer
************************************************************

257. spacer 1.12|52507|68|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 8, identity: 0.882

tcacgggagctaccggagctaccggagttaccggaatcactggagtcactggagtcacgg	CRISPR spacer
tcacgggagctaccggagctaccggagttaccggaatcactggagtcactggagtcacgg	Protospacer
************************************************************

258. spacer 1.20|52966|32|NC_014025|CRT matches to MN224566 (Mycobacterium phage Herbertwm, complete genome) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
acactggagccaccggagctaccggagccaag	Protospacer
  ** ********.*************..*

259. spacer 1.20|52966|32|NC_014025|CRT matches to AP013956 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S27-C232, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
caacaggagacactggagctacaggtgcaacc	Protospacer
..******* ************ ** *. **.

260. spacer 1.20|52966|32|NC_014025|CRT matches to AP013963 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S38-C146, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
caacaggagacactggagctacaggtgcaacc	Protospacer
..******* ************ ** *. **.

261. spacer 1.20|52966|32|NC_014025|CRT matches to AP013959 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S31-C107, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
caacaggagacactggagctacaggtgcaacc	Protospacer
..******* ************ ** *. **.

262. spacer 1.20|52966|32|NC_014025|CRT matches to AP013565 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C5F-MedDCM-OCT-S40-C10, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
caacaggagacactggagctacaggtgcaacc	Protospacer
..******* ************ ** *. **.

263. spacer 1.20|52966|32|NC_014025|CRT matches to AP013961 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S34-C156, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
caacaggagacactggagctacaggtgcaacc	Protospacer
..******* ************ ** *. **.

264. spacer 1.22|53083|32|NC_014025|CRT matches to MN224566 (Mycobacterium phage Herbertwm, complete genome) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
acactggagccaccggagctaccggagccaag	Protospacer
  ** ********.*************..*

265. spacer 1.22|53083|32|NC_014025|CRT matches to AP013956 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S27-C232, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
caacaggagacactggagctacaggtgcaacc	Protospacer
..******* ************ ** *. **.

266. spacer 1.22|53083|32|NC_014025|CRT matches to AP013963 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S38-C146, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
caacaggagacactggagctacaggtgcaacc	Protospacer
..******* ************ ** *. **.

267. spacer 1.22|53083|32|NC_014025|CRT matches to AP013959 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S31-C107, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
caacaggagacactggagctacaggtgcaacc	Protospacer
..******* ************ ** *. **.

268. spacer 1.22|53083|32|NC_014025|CRT matches to AP013565 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C5F-MedDCM-OCT-S40-C10, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
caacaggagacactggagctacaggtgcaacc	Protospacer
..******* ************ ** *. **.

269. spacer 1.22|53083|32|NC_014025|CRT matches to AP013961 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S34-C156, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgacaggagccactggagctaccggagttact	CRISPR spacer
caacaggagacactggagctacaggtgcaacc	Protospacer
..******* ************ ** *. **.

270. spacer 1.9|52264|68|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 9, identity: 0.868

tcactggagtgacaggagccactggagctaccggaatcactggagctactggagctaccg	CRISPR spacer
tcactggagtgacaggagccactggagctaccggaatcactggagctactggagctactg	Protospacer
**********************************************************.*

271. spacer 1.24|53200|50|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 9, identity: 0.82

tgacaggagccactggagctaccggaatcactggagctactggagctact	CRISPR spacer
ctaccgggatcactggagctaccggagtcactggagctactggagttacc	Protospacer
. ** **...****************.******************.***.

272. spacer 1.3|51706|77|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 17, identity: 0.779

ttaccggagtcacgggagttactggaatcactggagtcactggagtgactggagttaccg	CRISPR spacer
ttaccggagtcacgggagttactggaatcactggagtcactggagtgactggagttaccg	Protospacer
************************************************************

273. spacer 1.4|51805|77|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 17, identity: 0.779

aaactggagttactggagaaacgggagctaccggagtcactggaatcactggagctactg	CRISPR spacer
aaactggagttactggagaaacgggagctaccggagtcactggaatcactggagctactg	Protospacer
************************************************************

274. spacer 1.4|51805|77|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 17, identity: 0.779

aaactggagttactggagaaacgggagctaccggagtcactggaatcactggagctactg	CRISPR spacer
aaactggagttactggagaaacgggagctaccggagtcactggaatcactggagctactg	Protospacer
************************************************************

275. spacer 1.5|51904|77|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 17, identity: 0.779

tcactggagtgactggagttaccggagtcacgggagctaccggaatcactggagttactg	CRISPR spacer
tcactggagtgactggagttaccggagtcacgggagctaccggaatcactggagttactg	Protospacer
************************************************************

276. spacer 1.5|51904|77|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 17, identity: 0.779

tcactggagtgactggagttaccggagtcacgggagctaccggaatcactggagttactg	CRISPR spacer
tcactggagtgactggagttaccggagtcacgggagctaccggaatcactggagttactg	Protospacer
************************************************************

277. spacer 1.7|52084|77|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 17, identity: 0.779

ttactggaattaccggagttactggaattaccggagttactggagtgactggagttaccg	CRISPR spacer
ttactggaattaccggagttactggaattaccggagttactggagtgactggagttaccg	Protospacer
************************************************************

278. spacer 1.7|52084|77|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 19, identity: 0.753

ttactggaattaccggagttactggaattaccggagttactggagtgactggagttaccg	CRISPR spacer
ctaccggaattaccggagttactggaattaccggagttactggagtgactggagttaccg	Protospacer
.***.*******************************************************

279. spacer 1.1|51481|86|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 26, identity: 0.698

tcactggggctactggagcaacgggagctaccggagtcactggagctactggagctactg	CRISPR spacer
tcactggggctactggagcaacgggagctaccggagtcactggagctactggagctactg	Protospacer
************************************************************

280. spacer 1.2|51589|95|NC_014025|CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 35, identity: 0.632

tcactggagctactggaattactggaattactggaattaccggagtcactggggctactg	CRISPR spacer
tcactggagctactggaattactggaattactggaattaccggagtcactggggctactg	Protospacer
************************************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_014019

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_014019_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014019_1

379599-379758

Orphan

Consensus_repeat	Method
CAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGGTAGCGAAACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014019_1

>merge|NC_014019|1|379599-379758|CRISPRCasFinder
CAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGGTAGCGAAACAAATGTACAAGAAGTGAAACAACAAAATGCACAAGCAGCGGCAAACAAAAGCCAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGCTAGCGAAACAA

>NC_014019|1|1|379599-379758|CRISPRCasFinder
CAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGGTAGCGAAACAA	ATGTACAAGAAGTGAAACAACAAAATGCACAAGCAGCGGCAAACAAAAGC
CAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGCTAGCGAAACAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_014019.1\|WP_013055167.1\|386196_387210_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213234
NC_014019.1\|WP_029324552.1\|376005_376986_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|377294
NC_014019.1\|WP_013055164.1\|381186_382938_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NC_014019.1\|WP_013055166.1\|384695_385994_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|183493
NC_014019.1\|WP_013055151.1\|372154_373057_-\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|273800
NC_014019.1\|WP_013055168.1\|387202_387994_+\|ABC-2-family-transporter-protein	unknown	unknown	gnl\|CDD\|226953
NC_014019.1\|WP_013055156.1\|375672_375942_+\|YfhJ-family-protein	unknown	unknown	gnl\|CDD\|379438
NC_014019.1\|WP_013055154.1\|374988_375303_+\|YfhH-family-protein	unknown	unknown	gnl\|CDD\|378063
NC_014019.1\|WP_013055152.1\|373152_373962_+\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|237619
NC_014019.1\|WP_013055158.1\|377225_378320_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NC_014019.1\|WP_013055153.1\|374252_374906_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187643
NC_014019.1\|WP_013055163.1\|380480_381017_+\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|184219
NC_014019.1\|WP_013055170.1\|388881_389274_+\|two-pore-domain-potassium-channel-family-protein	unknown	unknown	unknown
NC_014019.1\|WP_171843283.1\|384385_384559_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013055155.1\|375381_375537_-\|small,-acid-soluble-spore-protein-K	unknown	unknown	gnl\|CDD\|285399
NC_014019.1\|WP_013055165.1\|382973_384062_-\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NC_014019.1\|WP_013055159.1\|378354_378579_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013055169.1\|388003_388789_+\|ABC-2-family-transporter-protein	unknown	unknown	gnl\|CDD\|226218
NC_014019.1\|WP_170959598.1\|378691_379444_+\|enoyl-[acyl-carrier-protein]-reductase-FabL	unknown	unknown	gnl\|CDD\|236145
NC_014019.1\|WP_013055162.1\|380024_380285_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372951

Protein	Function_ID	Function_description	E-value
NC_014019.1\|WP_013055167.1\|386196_387210_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213234	cd03267, ABC_NatA_like, ATP-binding cassette domain of an uncharacterized transporter similar in sequence to NatA. NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the proton-motive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunorubicin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single integral membrane protein.	1.65462e-121
NC_014019.1\|WP_029324552.1\|376005_376986_-\|metal-dependent-hydrolase	gnl\|CDD\|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	7.98055e-35
NC_014019.1\|WP_013055164.1\|381186_382938_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NC_014019.1\|WP_013055166.1\|384695_385994_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|183493	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional.	0
NC_014019.1\|WP_013055151.1\|372154_373057_-\|TIGR01777-family-protein	gnl\|CDD\|273800	TIGR01777, Hypothetical_UPF0105_protein_Rv2216/MT2273/Mb2239., TIGR01777 family protein. This model represents a clade of proteins of unknown function including the E. coli yfcH protein. [Hypothetical proteins, Conserved].	1.91118e-139
NC_014019.1\|WP_013055168.1\|387202_387994_+\|ABC-2-family-transporter-protein	gnl\|CDD\|226953	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only].	3.15486e-29
NC_014019.1\|WP_013055156.1\|375672_375942_+\|YfhJ-family-protein	gnl\|CDD\|379438	pfam14043, WVELL, WVELL protein. This family includes the B. subtilis YfjH protein, which is functionally uncharacterized. This is not a homolog of E. coli YfjH, a synonym for IscX, which belongs to pfam04384. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length and contain a highly conserved WVELL motif.	7.28774e-43
NC_014019.1\|WP_013055154.1\|374988_375303_+\|YfhH-family-protein	gnl\|CDD\|378063	pfam08838, DUF1811, Protein of unknown function (DUF1811). This is a bacterial family of uncharacterized proteins. Some of the proteins are annotated as being transcriptional regulators. The structure of one of the proteins in this family has revealed a beta-barrel like structure with helix-turn-helix like motif.	5.92623e-60
NC_014019.1\|WP_013055152.1\|373152_373962_+\|recombination-regulator-RecX	gnl\|CDD\|237619	PRK14135, recX, recombination regulator RecX; Provisional.	2.8941e-120
NC_014019.1\|WP_013055158.1\|377225_378320_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	5.34285e-150
NC_014019.1\|WP_013055153.1\|374252_374906_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187643	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR. These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.27055e-55
NC_014019.1\|WP_013055163.1\|380480_381017_+\|DUF402-domain-containing-protein	gnl\|CDD\|184219	PRK13662, PRK13662, hypothetical protein; Provisional.	2.65481e-127
NC_014019.1\|WP_013055155.1\|375381_375537_-\|small,-acid-soluble-spore-protein-K	gnl\|CDD\|285399	pfam08176, SspK, Small acid-soluble spore protein K family. This family consists of the small acid-soluble spore proteins (SASP) belonging to the K type (sspK). The sspK are unique to the spores of Bacillus subtilis and are expressed only in the forespore compartment of sporulating cells of this organism. The sspK gene is monocistronic and transcription is primarily by the RNA polymerase with the forespore-specific sigma factor, sigma-G. Mutation deleting sspK results in loss of SspK from the spore but had no discernible effect on sporulation, spore properties or spore germination.	2.82664e-17
NC_014019.1\|WP_013055165.1\|382973_384062_-\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	6.35009e-68
NC_014019.1\|WP_013055169.1\|388003_388789_+\|ABC-2-family-transporter-protein	gnl\|CDD\|226218	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.74767e-45
NC_014019.1\|WP_170959598.1\|378691_379444_+\|enoyl-[acyl-carrier-protein]-reductase-FabL	gnl\|CDD\|236145	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL.	3.53912e-173
NC_014019.1\|WP_013055162.1\|380024_380285_+\|hypothetical-protein	gnl\|CDD\|372951	pfam14182, YgaB, YgaB-like protein. The YgaB-like protein family includes the B. subtilis YgaB protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length.	1.26565e-19

>NC_014019.1|WP_170959598.1|378691_379444_+|enoyl-[acyl-carrier-protein]-reductase-FabL
MMSQKVALVTGSSRGIGKEIALRLAKEGYDIVLNYARSKSAAQEVAEEIKALGREALVVKANVGKVEKIKEMFEQIDEVFGRLDVFVSNAASGVLRPIMELEETHWNWTMDINSKGYLFCAQEAAKRMEKVGGGKIVTISSLGSIRYLENYTTVGVSKAAVEALTRYLAVELAPKNIVVNAVSGGAVDTEALKHFPNRDELLDDARKHTPAGRMVEPKDMVDAVMFLVSDQANMICGQTLIIDGGRSLLM
>NC_014019.1|WP_013055159.1|378354_378579_-|hypothetical-protein
MYVGRDMTALSMISKSEWKDSELAFFHHSLQQITPYLNAEGQSIHQQIIKEIEARDGLQRQEADYTHGTHVSYD
>NC_014019.1|WP_013055158.1|377225_378320_+|A/G-specific-adenine-glycosylase
MKQSKDIVQNFDIRAFQDDLISWFEQEQRILPWRQDQDPYKVWVSEIMLQQTRVDTVIPYFNNFISKFPTIKDLAYANEDDVLKAWEGLGYYSRARNLQTAVREVHEQYGGEVPNTPAEISKLKGVGPYTTGAILSIAYGVPQPAVDGNVMRVLSRILSVWDDIAKPKTRKLFEDIVHEIISKDNPSYFNQGMMELGAIVCTPTSPSCLLCPVREHCRAFEEGVQNELPVKSKKKAPRALQLAAAVIRDEEGNYLIHKRPSKGLLANLWEFPNIEVDLSIAPDHQQLHAFIQNEYGADIKIHAPFTTIQHVFSHIVWNITVYEAELISDISALKNLKVVSEKDLEQYAFPVSHQKILKEYLLVK
>NC_014019.1|WP_029324552.1|376005_376986_-|metal-dependent-hydrolase
MDTGTHIAMGIALGGLATLDPTVSANTATLDAVMIGVMAGSLAPDLDTVLKLRNNAQYIRNHRGITHSIPAVILWPLLIVLILSLLLPGANLLHLWMWTFAGVIIHVFVDIFNAYGTQALRPFTNKWIALGVINTFDYVIFSAHVLAIIIWFAGAEPGPTFITLYVLLAFYYGLRFYMRHQIAKKLRKQFPDVIKLNISPTMRFTHWHLAVTTEKYFHVGRAIGEEIFIYDTFDKVPIPESAVIEVAKKDENLSAFLSFSPIYRWELDEYNDHIEVRFIDLRYRSKDYYPFVAVVQLDYDLNIICSYTGWIFSEKKLRKKLDYLPH
>NC_014019.1|WP_013055156.1|375672_375942_+|YfhJ-family-protein
MNDIFERLTNQLLNKNSSLSYAQARTWVELFWEDFESSYAKAGYDYKGKEATEKVVTMYINSYGDKLHEIAVKNPKYQHLLNNDDYLKH
>NC_014019.1|WP_013055155.1|375381_375537_-|small,-acid-soluble-spore-protein-K
MRNKAKDFPNQHHTKFEGEPRAKAEYASKRANGTINTHPQERMHASNEREE
>NC_014019.1|WP_013055154.1|374988_375303_+|YfhH-family-protein
MSEKRYSDMTTYELQQEIGSLQEKARKAEQLGMVNEYAVLERKVTMARSYLLDPETFKAGEVYEIQGDPGSYFKIDYMNGVFAWGFRLGSPQNEEALPISMLKK
>NC_014019.1|WP_013055153.1|374252_374906_-|SDR-family-NAD(P)-dependent-oxidoreductase
MKTVLITGGATGLGKELAKFYAKDYNVILAGRNQYKLKEAQHELGDNVYTMSVDITKYEEVGKSVEKLLVQHSVDILINNAGIGHFGPLTDYTKQAIDEVIDTNVKGTIFLTQALMPHLLTRPEPKVMNIISTAGLRGKANESVYVASKFGVRGFTESLKVEYKDTSLHVIAAYMGGMNTPFWDHNNHIKDKSRLRSASEIAEIIYKQQNDSEDILF
>NC_014019.1|WP_013055152.1|373152_373962_+|recombination-regulator-RecX
MPVVTKITTQKNSGERYNVYLDYGKGEEFGFGVDENVLIKYDLKKGRELDEFELTEIQYADDEKKAYNLAITYLSYRMRSEKEVHDYLKKKEINSTIIQQVIQKLVSHRYLNDEEFAKAFVLTQMNTTSKGPNVIQRELKEKGISDSIITLSLCEYPEEQQIQTAVKLIEKLKGKYKKLSQVMMKQKMEQALAVKGYSFSIIQEAFQRTNTEKESDEAWEALQYQGMKVHRRFSKYEGWEYQQKMKQALYRKGFSIDQIQSFLDSIEEE
>NC_014019.1|WP_013055151.1|372154_373057_-|TIGR01777-family-protein
MKIVIAGGTGFVGKALTKHFLTQKHYVYILTRNADKAARDPKLKYVEWMQENSQPEEHVEGADVFINLAGVSLNSGRWTDERKKAIVESRLSSTQEILRIMAALPEKPSLYVNASAVGYYGTSTTETFTEASPSMGTDFLAETVKKWENEALKAMELNIRTVLTRFGVILGKDGGALPSTALPYKLFAGGTVGSGEQWMSWVHLQDVVKIIDYCIHTEQIEGPVNVTAPNPVQMKEFGKTIGKVLNRPHWMPVPSFGLQLLMGEMSMIILKGQRVLPEKLIQQNYIFTYTVLEDALRDLL
>NC_014019.1|WP_013055162.1|380024_380285_+|hypothetical-protein
MKKFDELVTQQLETMDQLLFLQSEIERCQEIEGELIKLHEEAKLHSVQGEISEMKLKLKEIQLTFEAQTEDIIRTYKSEGACSTLA
>NC_014019.1|WP_013055163.1|380480_381017_+|DUF402-domain-containing-protein
MGIPVEGETIQIHSYKHNGHIHRVWDRTTVLKATNNLVIGGNDRTVVTESDGRTWVTREPAICYFHAQQWFNVIGMIREDGIYYYCNISSPFIYDDNEALKYIDYDLDIKVYPDMTYTLLDEDEYEKHRKEMNYPEVIDRILHNHVEELKGWIRQRKGPFAPDFIDIWYERFLTYRHS
>NC_014019.1|WP_013055164.1|381186_382938_+|ABC-transporter-ATP-binding-protein
MGSIRRYMKFVQPYKWQIVGTVLIGIIKFAIPLLIPLLLKYVLDDIVNGHGMSSSEKVHKMVTIMGISFVIFLVLRPPIEYYRQYYAQWVSSKVLYDIRDQLFSHIQKLSLRYYANTRAGEVISRVINDVEQTKNFVITGLMNVWLDMMTIVIAIVIMFTMNVPLTLVSIILLPVYAFSVKYFYSRLRHLTRVRSQALAEVQGHLHERVQGISVIRSFAIEPHEQKQFDKQNSNFLQKAISHTNWNAKTFAVVNTITDLAPLIVITFAGYQVITESLSVGTMVAFVAYIDRLYNPLRRLVNSSTTLTQSVASMDRVFEFIDEEYDITDKKDAKECTELHGKVQFEHVSFAYEEEEKPVIHDINLDVEKGKSVAFVGMSGGGKSTLISLIPRFYDVTEGKILIDDIDIKTYKVRSLRDKIGIVLQDTVLFSDTVKNNILLGKPGATDEEVIAAAKAANAHDFIMNLPEGYDTKVGERGMKLSGGQKQRISISRVFLKNPAILIFDEATSALDLESEHYIQEALAELAKDRTTFIVAHRLSTITHVDEIVLLENGRVVERGSHEELIKKKGHYYQLFNVQQLDTI
>NC_014019.1|WP_013055165.1|382973_384062_-|aromatic-acid-exporter-family-protein
MKLGARILKTGIAITLSLLLGEFLSLPSPIFAAIAAVFAIQPSIYRSYLTILEQIQANVIGAASAVCFGLIFGTHPIIIGFTAVVVIAVNLKLRINNTIGLALVTVIAIMENPGDNFVEYALIRFGTVLLGVFSAFIVNLIFIPPKYETKLYYKIVSTTEEIIKWIRMNLYHASEHTLLKEDIEKMKDNVAKMNQLFDFYKEERTYSTKKRFVKSRKLVLFRQMITVTTRALTTLKLLHRVENDLQVMPQQFQDLIKSEVECLLMYHEQVLLKFIGKLRVQPTTTVPNEACVGKRALIDKFMQYKIYDNDEENKVIYHIFPLISVIIEYSEELEHLDKLIDTFQNYHKDDNSFDINHQRQED
>NC_014019.1|WP_171843283.1|384385_384559_-|hypothetical-protein
MIGGQGEDSCGKSRTGETPQERMRRGGLAAARGKRSLAWKSTAVSQAVQLMYPICSS
>NC_014019.1|WP_013055166.1|384695_385994_-|glutamate-1-semialdehyde-2,1-aminomutase
MQFTKSEQLHAEALEHIVGGVNSPSRSYKAVGGGAPIAMEKASGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITKAAETGVLYGTPTAHEVTFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRDKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIANEVITVPFNDIEPYKEALEKWGDQIAAVLVEPIVGNFGIVEPEPGFLEQVNELTHEAGALVIYDEVITAFRFMYGGAQDLLGVKPDLTAFGKIIGGGLPIGAYGGKKEIMEKVAPLGPAYQAGTMAGNPASILSGIACLEVLKQEGVYEQLDKLGAMLEEGILKHARTYNMPITINRLKGALTVYFTTETVKNYEQAENTDGELFARFFKLMLHQGVNLAPSKYEAWFLTTAHTEQDIAETLEAVEKAFKQLSEER
>NC_014019.1|WP_013055167.1|386196_387210_+|ATP-binding-cassette-domain-containing-protein
MKNAIEVNQLRKEFKAYSSRSGLKGAFRDLFTRNYRVMKAVNDISFTVKQGEMVGYIGENGAGKSTTIKMLTGILTPTSGDITVNGMNPHKEREKFAQTIGVVFGQRSQLWWDIAVQESFRLLKKVYKVSDEDYNAHMEHVIQTLDIGPLLDKPVRKLSLGQRMRCELAAALIHNPPLLFLDEPTIGLDVLVKLKIRQFLKEINEKYNTTILLTTHDLADIEALCERVVMLDEGSIIYDGSLQKLRSNWGDLKQVTFEFGTAPNKEQLKLLTQGMPVNWIEGDQKYLWTAQLQNKGDLMSQLIAKVVAKHEISDINIEEISTEEIIRNIYEEGVVNG
>NC_014019.1|WP_013055168.1|387202_387994_+|ABC-2-family-transporter-protein
MDKYIEMIRIRFLMMLAYRTNYYSGILIYAINIGAYYFLWSAIYGGKENIQGLSITQMTTYVAVSWMARAFYFNNIDREMAMEIKDGKVAVELIKPYSYLGMKTMQGLGEGIFRLLFFSVPGMIIVAFLFPVQFSANAATWLYFGLSLIFSFIINTQINLLTGITTFFLFNNDGLIRAKRVVIDLFSGLLLPISFYPLWAQHIMSYFPFQAISYIPSMIFTNGFKGQEVINALITQAVWSGLLFIPIACLWNIAKKKMVIQGG
>NC_014019.1|WP_013055169.1|388003_388789_+|ABC-2-family-transporter-protein
MFYFSIFFQYISQYMKTRLQYRTDMVVEIISDLLFQTVNLIFILVVFGHTQSLHGWSREEIIFIYGFFLVPFAIFSSFFNIWDFNERYIVKGEMDRILTRPIHSLFQVILERMELESLFGGITGIAVMAYAASSLHLHFQWYDVFIFLLFILGGALVYAGIFIALASIGFWSDARTSIMPTIYNIGNYGRYPVDIYNNVIRYVLTWILPFAFVGVYPAAYFLGRSEWYGYAFLTPVMGIVFFVISIFLWNTGVKKYRGAGN
>NC_014019.1|WP_013055170.1|388881_389274_+|two-pore-domain-potassium-channel-family-protein
MVVFLILVIIVFVIGSMKFLFEKELGEFHFFSIGHFFVLFYSYITVLLGFSLIYTVCEMGSIPVLSGGFEHEGHYFYTLFNSMYFSAATLFSVGYGDMYPVGIGKLFATFEAFIGYIMPAIFVMRTVTRT

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Crispr_ID: NC_014019_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014019_2

963424-963519

Orphan

Consensus_repeat	Method
TGTAACTATAATGGTTACAACGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014019_2

>merge|NC_014019|2|963424-963519|CRISPRCasFinder
TGTAACTATAATGGTTACAACGAGCTGAGAAGAATTAGCAGTGCTATAAAAGGCTCAAATTTTTTGTGTTTTATGTAACTATAATGGTTACAACGA

>NC_014019|2|2|963424-963519|CRISPRCasFinder
TGTAACTATAATGGTTACAACGA	GCTGAGAAGAATTAGCAGTGCTATAAAAGGCTCAAATTTTTTGTGTTTTA
TGTAACTATAATGGTTACAACGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_014019.1\|WP_013055702.1\|970743_971058_-\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NC_014019.1\|WP_013055684.1\|956047_957256_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
NC_014019.1\|WP_013055686.1\|958363_959812_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143467
NC_014019.1\|WP_013055697.1\|968328_968556_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|184493
NC_014019.1\|WP_013055682.1\|953093_953990_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|183585
NC_014019.1\|WP_013055691.1\|964345_965332_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NC_014019.1\|WP_055989280.1\|967195_967375_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013055689.1\|962919_963117_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NC_014019.1\|WP_013055681.1\|951957_952578_+\|VTT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378149
NC_014019.1\|WP_013055687.1\|959899_960775_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NC_014019.1\|WP_013055701.1\|970496_970670_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|237837
NC_014019.1\|WP_013055680.1\|950783_951764_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176232
NC_014019.1\|WP_013055692.1\|965944_966487_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239313
NC_014019.1\|WP_013055693.1\|966604_967048_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NC_014019.1\|WP_013055690.1\|963540_964173_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225462
NC_014019.1\|WP_013055695.1\|967573_968185_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_014019.1\|WP_013055688.1\|961543_962872_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238618
NC_014019.1\|WP_013055696.1\|968177_968324_+\|YvrJ-family-protein	unknown	unknown	gnl\|CDD\|378969
NC_014019.1\|WP_013055683.1\|954631_955936_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NC_014019.1\|WP_013055685.1\|957255_958212_+\|hydroxymethylglutaryl-CoA-lyase	unknown	unknown	gnl\|CDD\|163676

Protein	Function_ID	Function_description	E-value
NC_014019.1\|WP_013055702.1\|970743_971058_-\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	2.42021e-30
NC_014019.1\|WP_013055684.1\|956047_957256_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	5.40775e-141
NC_014019.1\|WP_013055686.1\|958363_959812_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143467	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.	0
NC_014019.1\|WP_013055697.1\|968328_968556_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|184493	PRK14082, PRK14082, hypothetical protein; Provisional.	2.40722e-08
NC_014019.1\|WP_013055682.1\|953093_953990_+\|shikimate-dehydrogenase	gnl\|CDD\|183585	PRK12548, PRK12548, shikimate dehydrogenase.	9.07569e-133
NC_014019.1\|WP_013055691.1\|964345_965332_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.96257e-65
NC_014019.1\|WP_013055689.1\|962919_963117_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	8.42897e-30
NC_014019.1\|WP_013055681.1\|951957_952578_+\|VTT-domain-containing-protein	gnl\|CDD\|378149	pfam09335, VTT, VMP1, TMEM41, and TVP38 (VTT) domain. The VTT domain was previously called the SNARE-associated domain, but was renamed as there seems to be no evidence for association with SNARE proteins.	6.16816e-13
NC_014019.1\|WP_013055687.1\|959899_960775_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	3.6214e-14
NC_014019.1\|WP_013055701.1\|970496_970670_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|237837	PRK14861, tatA, twin arginine translocase protein A; Provisional.	4.96868e-23
NC_014019.1\|WP_013055680.1\|950783_951764_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176232	cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	7.28176e-151
NC_014019.1\|WP_013055692.1\|965944_966487_+\|peroxiredoxin	gnl\|CDD\|239313	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric interface in atypical 2-cys PRX and PRX5) at the opposite end of the monomer to form the stable decameric (pentamer of dimers) structure.	1.41675e-107
NC_014019.1\|WP_013055693.1\|966604_967048_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	5.95691e-24
NC_014019.1\|WP_013055690.1\|963540_964173_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|225462	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only].	1.6882e-84
NC_014019.1\|WP_013055695.1\|967573_968185_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	4.08537e-11
NC_014019.1\|WP_013055688.1\|961543_962872_+\|amidohydrolase-family-protein	gnl\|CDD\|238618	cd01293, Bact_CD, Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.	1.14574e-110
NC_014019.1\|WP_013055696.1\|968177_968324_+\|YvrJ-family-protein	gnl\|CDD\|378969	pfam12841, YvrJ, YvrJ protein family. This family of short proteins are related to B. subtilis YvrJ protein. None of the members of this family have been functionally characterized.	8.32281e-10
NC_014019.1\|WP_013055683.1\|954631_955936_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.57432e-90
NC_014019.1\|WP_013055685.1\|957255_958212_+\|hydroxymethylglutaryl-CoA-lyase	gnl\|CDD\|163676	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	2.18557e-151

>NC_014019.1|WP_013055689.1|962919_963117_-|cold-shock-protein
MVQGKVKWFNAEKGFGFIEVEGQDDVFVHFSAIQGEGFKSLEEGQEVTFEIEDGARGPQAANVQK
>NC_014019.1|WP_013055688.1|961543_962872_+|amidohydrolase-family-protein
MLLHLINVRLPIMHDHALFEVKISNGMYTSIVLQNGYLEGDEFFPLHAAVLGKETSLDAQGRVLLPGFVDMHMHLDKAHSLPQVPNISGTLQEAIKNYSSSLPAFPEEEIKQRMFKTALQALANGTTTIRTHIDFDCSMEEDSLFRSLQAAVEVRDELSPYMDMQVVPLFSNLDIDDMHKMNKIERAFDLEIDAIGGCPHLARNPEKEIDALFSLAQAYNKPLDLHVDESDDPSVDTIINIAHRTIELNMEGKVVVGHLCSLAGMTDAKVKEILNLLKQAKIGVVTLPASNLYLQGREDKGIVRRGVTRIRDIQKAAIPIATASDNVNDPFHPFGKADLLQVGLLTAYAAHMGSPDEQRQLLRMITSIPARLIGKEKYGVEEGNEANFVLLNVQSVQEIWTELPETRFVFNKHRWLSVKETHQRLADTNLTNLWQENQILIG
>NC_014019.1|WP_013055687.1|959899_960775_+|sugar-phosphate-isomerase/epimerase
MPNQFSLAYLTVLGCSPPEMTYMAAKAGYDFVSLRPIYMGLPGEPNYALAENKQLMRETKSAMSETGVKLLDIELARIYEGVNPKRYLPAMEAAAELGGRHVLSSIWTDDRNFGIECFAEICDLAKPFGLTIELEYVPIASVYNLKGAMDVLHTANRENAGLMIDIHHFHRSGDKVEDLEDVPREWFRYLHLCNASAEIPSSKEEMTRVLREERLYLNEEGIDVASIINRIPQVPYSIELPNVKRANELGYEEFARQCLQTAKQYLDKHPRKKYVSHDAVGQDQLRFHSTR
>NC_014019.1|WP_013055686.1|958363_959812_+|aldehyde-dehydrogenase-family-protein
MIETIEKKSQPYINGGWIIENREVALIKNPYSGEVIGEQLLANEEDVEKALASAYEAKKHVAALSSYQRSKILKKAALLLEQEKEKFARLISLELGKPLKNTLDEVARSIETLELSGEEAKRLIGETLPGDVSERGAQAIASTFRVPVGVVAAITPFNAPLNLVCHKIGPAFAAGNSVILKPSSQTTLIATELLKLLLRAGFPKNAVNMVLGRRQVAQQIVKDDRVNIISFTGGTVASKNICELAGMKKVLLELGGNAATIVHNDADLNRAAAMCAKTGFSNSGQSCISVQRIYVHQSVVSEFTNLLKDEVLTLKIGDPLLPDTDVGCVVDVHAAARVTSWIDEAVQSGAQVICGGKRRGATVEPTVLLNPSKESKVICEEVFGPIISIVPYATIEEAIEETNDSAFGLQAGIFTNKMDLAYKVAHSLEMGGVVINGTSNFRLDHWPYGGVKNSGIGREGPRYAVEEMTETKMIVLRLPTEN
>NC_014019.1|WP_013055685.1|957255_958212_+|hydroxymethylglutaryl-CoA-lyase
MNTIQKIELPEKVIICEVAPRDGFQAEHEWIPTEEKISIIRQLAKTGIQSMEITSFVHPRAIPQLKDAEQVVESVQDLTNIKFRALVPNVKGAQRAIDAGVKKLKLMLSATDSHSLSNANCSVEEAQKGFYPIIELAEKHNVKVGGSISVAFGCPYEGTVAIERISSIVERYKMMGVEEISLADTTGMANPQQVYRMLGFLKQNYPGIIFSMHLHNTRGMAFSNVVAALQQGVIHFDSSIIGLGGCPYAPGATGNIATEDLVHGLSEMGIHTGIDLNKLIEAAKEVKQVIGHDGGSYMLQAGPCSQLHAKPKVQEKLV
>NC_014019.1|WP_013055684.1|956047_957256_+|CoA-transferase
MLTKNYGPLTGVQILDISTMIAAPFGATLLADLGAEVTKIELPGKGDTLRTVGPWKGTEPLRWPGLARNKKSVTLDIRSEEGAEIFKKLISGVDILIENFRPGTLEKWNLGYEELKKVNPKLVMVRVSGYGQTGPYREKAGFGTPGTAFSGHTYLQGYSDRPPVSPSYSLLDYVTGIYTAFACVSAIYHRDVHEQPEGQVVEMGLYESIFRMMEFLIAEYDQNGKVRERSPGLAGHSSPAGTYETKDGKFVVLVCSTDSTFDRLAEAMERKDMLKDPRYYTNVERLKHDHEVQEIVSNWIKSFTQDELQAKLDSFGVPVSPIYSIEDIFNDPQYRERENIVEVEHPRLGKIKVPGVVPKFSHTPGAIRHRAPELGEHNEEILGGKLGLSSEDLAVLKEKGVI
>NC_014019.1|WP_013055683.1|954631_955936_+|MFS-transporter
MKKHRWSIVFLIAVGVVVNYFDRINMSIAMPLLQKEFNLTAGQMGIFLSAFAWSYALLQLPIGPLLDKIGVKWVTRVATVIWTVACLLTAVANGWGLIILSRVLLGVGEAPFFPSAAKAVSHWVPRQERGKAIAAYDSQSKLSNAIGAPILALIVTEWGWRGGFLATAILSFIYAIVYWIWYREPHEDERLTKEEYDYIVQGGSQSSEEAKGSAMENIRYLLTKRKVWAVFIGFAAYGYSWFLFLTWLPGYLATEMNMSILKSGWYSAIPWIVGTITEIVIGGWLVDRLINKGYNRTRVSKFFLVIGMVFGLSIIGAAFTHSANVAVFWISTALGGLVVTSAVAYSIPTFIAPKGTVGTLTGLLTFGNNSMAIVAPITTGFIVQATGSFMYAFLLAAAFLVIGILSYTFLLTDLDPIESKESILLEEKELTLEK
>NC_014019.1|WP_013055682.1|953093_953990_+|shikimate-dehydrogenase
MKSVGRINGKTQLIGLLATPIGHSLSPSMHNMAFKKLGLNYAYLAFEVGNDSLEDAIKGLRALNVKGFNVSMPNKTKILPFLDELADSAKFSGAVNTVVNDNGVLVGHSTDGMGYIRNLKEHGVDITGKKMTLIGSGGAATPIAIQAALEGLEELTIFARHDEFYSKAVENVKIINEEMKHVSCKAKLYSLEDTDMLREEIRTSDILTNGTGVGMKPLEEFSIIEDISMLRPDLIVTDVVYMPMRSKLLEQAESIGCHTINGIGMMIWQGAMAFELWTGKEMPVEYIKEQMFEPSLQY
>NC_014019.1|WP_013055681.1|951957_952578_+|VTT-domain-containing-protein
MKEREICMIERRKKVQGFIDFVQNLGIVGIFIATAIEAAAIPFPCTLSILLIGSVLQLSIWKILIVSAVNTVIYIAFNYIPFVMGYRFESITKRWFGEKNIKRAQKWFHKYGKWSITISRPISIANYITYLAGLSKIKSKDFVLYSTLGIFPWFVFLLYVGGLGDIEKIQKYLHDVDRLIIVILIIGVTVGAGWWMKKRRESHAQE
>NC_014019.1|WP_013055680.1|950783_951764_+|zinc-binding-dehydrogenase
MKALLLQDKNKWTEMKVEEIEKPLPNKGEVVVEVHAVGLNPVDYKTATNGNPHWTYPHILGLDVAGTIDAVGEGVVDWKKGDRVVYHGDFMKKGGYAEYAVTTVHSISRIPDAVTFEEAAALPTAGYTAYEALFRKLPMNHIQTILIHGGAGGVGGFGVQLAKNAGKTVFSTASAHNHEYVKSLGADYVIDYREENVVEKVLELTNGRGVDAVLDTVSAKNATDSLDMIAYRGHLAHIAGAPDYTKVKPFTKVTSYHEVALNAAHHIDDMIAQADLAKMGDELLALVAEKKVAPMIERLISLKEVPSALEELSKRHVKGKIITKVK
>NC_014019.1|WP_013055690.1|963540_964173_+|NAD(P)-dependent-oxidoreductase
MKIGVIGATGKAGQLIMEEAKQRGHEVTAIVRNASKLKNQTNVMEKDIFAITSKDIEQFDAVVDAFNAPPGSEQLHVESIQSLIKVFQGVQTRLAVVGGAGSLFVDAEKTTPLMSTEGFPAAYYPTASNMGKGLKELEKSTVNWTYLSPAAFFDAEGARTGAYQLGKDHVITNSQNESYISYADYAIALIDELENKNHVNERFAVVGEKA
>NC_014019.1|WP_013055691.1|964345_965332_+|Gfo/Idh/MocA-family-oxidoreductase
MIRFGIIGTNWITDRLLESAQYVDDFQLAAVYSRTIEKAEEFAGKYDIPHIFTDLEEMAASAEIDAVYIATPNAYHAEQAILFLKNNKHVLCEKPLAANAAEVTRMIQTAKNHKVLLMEAMKSTLLPNFKGIQENLHKIGPIRKYVASYCQYSSRYDKYKEGIVLNAFKPELANGSLMDLGVYCLYPLITLFGGPHKIKATAFMLESGVDGEGSVALEYEDRDAVIMYSKITNSHLPSEIQGEKGSMIIDKIHTAEKVEIRYNDGRVEELTVDQPYPAMYYELNEFVELLKQGKMESDTNSYENSYLTMHVMDKVREQIGLVYPNDEK
>NC_014019.1|WP_013055692.1|965944_966487_+|peroxiredoxin
MAERMVGKQAPRFEMEAVLANKEFGKVSLEENMKNGKWTVLFFYPMDFTFVCPTEITALSDHYEEFEDLDAEVVGVSTDTIHTHLAWINTDRKANGLGDLNYPLAADPTHAVARDYGVLIEEEGVALRGLFIINPEGELQYAVVNHNNIGRSVEETLRVLQALQTGGLCPANWKPGQKTL
>NC_014019.1|WP_013055693.1|966604_967048_+|TlpA-family-protein-disulfide-reductase
MKLREQMPELTGATSWINDEVTKEDLVGDKATLIHFWSVSCHLCKEAMPEVNDLRDEYDDQLNVVAVHMPRSEDDLDMGVIEAMAMGHDITQPIYVDSEHKLTDAFENKYVPAYYVFDKEGQLRHFQAGGNGMPMLRKRINRVLGEE
>NC_014019.1|WP_055989280.1|967195_967375_+|hypothetical-protein
MIGGQSEDSCGKSGTGETPQERMRRGGSPAARGKRSLARKSTAVSQADQLMYPICSSLN
>NC_014019.1|WP_013055695.1|967573_968185_+|sigma-70-family-RNA-polymerase-sigma-factor
MTQLYSQQEKRHDKECTFHTFLTNHSATLQTHIMNTFLTPERYERLQKAVVKNDTKEQILLNKEFHQFYSEVRLLHYINKLCRHYSRDVMRVKEKERSYIPLRLQQPAALDGNRTVEDMLGVQDGAVWEHEFLGNQLENRILHHAFRQLTAKQQCMLHLIIVERWTHKEIAAYFSISQQAVSSHYQRALSKLKKIMKVSDRYV
>NC_014019.1|WP_013055696.1|968177_968324_+|YvrJ-family-protein
MFDPQWLQLVGNVGFPAVLSFYLLLRVENNIKRLEEKVEELTTDLRKK
>NC_014019.1|WP_013055697.1|968328_968556_+|helix-turn-helix-domain-containing-protein
METLYELVNKVKAGDEEASRRLLKKLEPKLNKAVQSFSLHEREDVKQDLKIKILSAVKTFDFSKTPGLWEFLRHK
>NC_014019.1|WP_013055701.1|970496_970670_-|twin-arginine-translocase-TatA/TatE-family-subunit
MNLGFGEIALIVFVALLLFGPKKLPELGKAAGKTLKEFKNATKGIMEEDEKEKAPPK
>NC_014019.1|WP_013055702.1|970743_971058_-|multidrug-efflux-SMR-transporter
MAWIALIAAGFCEVGFVIFLKLSDGFKRLFPSIGFILFGAGSFYFLSLALKEIPLGTAYGIWTGVGAAGSVLLGMLFFREAKDMRRILFIFCIVAGVIGLKITG

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Crispr_ID: NC_014019_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014019_3

1064822-1064902

Orphan

Consensus_repeat	Method
ATAATGAATGATAGTCATTCATT	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NC_014019_3

>merge|NC_014019|3|1064822-1064902|CRISPRCasFinder
ATAATGAATGATAGTCATTCATTATTCTTCTTGCTGTTTATAAATTTCCATCACATTAATCATAAATGAATGATAGTCATT

>NC_014019|3|3|1064822-1064902|CRISPRCasFinder
ATAATGAATGATAGTCATTCATT	ATTCTTCTTGCTGTTTATAAATTTCCATCACATTA
ATCATAAATGAATGATAGTCATT

Protein	Signature genes	Signature genes Name	Protein_function
NC_014019.1\|WP_013055790.1\|1055218_1056211_-\|DUF3231-family-protein	unknown	unknown	gnl\|CDD\|371599
NC_014019.1\|WP_013055794.1\|1060566_1061496_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223566
NC_014019.1\|WP_013055788.1\|1054166_1054430_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NC_014019.1\|WP_013055798.1\|1066401_1067274_+\|carbon-nitrogen-hydrolase	unknown	unknown	gnl\|CDD\|143597
NC_014019.1\|WP_013055799.1\|1067312_1068434_+\|class-II-histone-deacetylase	unknown	unknown	gnl\|CDD\|212521
NC_014019.1\|WP_013055793.1\|1059873_1060518_+\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|236472
NC_014019.1\|WP_013055802.1\|1069958_1070600_-\|pyroglutamyl-peptidase-I	unknown	unknown	gnl\|CDD\|237299
NC_014019.1\|WP_162485294.1\|1061921_1064462_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NC_014019.1\|WP_013055789.1\|1054430_1055069_+\|SdpI-family-protein	unknown	unknown	gnl\|CDD\|227945
NC_014019.1\|WP_013055807.1\|1075214_1075772_-\|HPP-family-protein	unknown	unknown	gnl\|CDD\|377434
NC_014019.1\|WP_013055804.1\|1071580_1072285_-\|DUF969-domain-containing-protein	unknown	unknown	gnl\|CDD\|368767
NC_014019.1\|WP_013055795.1\|1061532_1061811_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013055797.1\|1064969_1066349_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NC_014019.1\|WP_013055801.1\|1069000_1069729_-\|flagellin	unknown	unknown	gnl\|CDD\|183759
NC_014019.1\|WP_013055806.1\|1073637_1075107_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|226987
NC_014019.1\|WP_041816506.1\|1056532_1056751_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013055792.1\|1057284_1059816_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NC_014019.1\|WP_013055791.1\|1056747_1057017_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013055803.1\|1070614_1071580_-\|DUF979-domain-containing-protein	unknown	unknown	gnl\|CDD\|377620
NC_014019.1\|WP_041816508.1\|1072661_1073573_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|372305

Protein	Function_ID	Function_description	E-value
NC_014019.1\|WP_013055790.1\|1055218_1056211_-\|DUF3231-family-protein	gnl\|CDD\|371599	pfam11553, DUF3231, Protein of unknown function (DUF3231). This bacterial family of proteins has no known function.	8.5699e-44
NC_014019.1\|WP_013055794.1\|1060566_1061496_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	2.46133e-71
NC_014019.1\|WP_013055788.1\|1054166_1054430_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	2.17109e-24
NC_014019.1\|WP_013055798.1\|1066401_1067274_+\|carbon-nitrogen-hydrolase	gnl\|CDD\|143597	cd07573, CPA, N-carbamoylputrescine amidohydrolase (CPA) (class 11 nitrilases). CPA (EC 3.5.1.53, also known as N-carbamoylputrescine amidase and carbamoylputrescine hydrolase) converts N-carbamoylputrescine to putrescine, a step in polyamine biosynthesis in plants and bacteria. This subgroup includes Arabidopsis thaliana CPA, also known as nitrilase-like 1 (NLP1), and Pseudomonas aeruginosa AguB. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 11. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer; P. aeruginosa AugB is a homohexamer, Arabidopsis thaliana NLP1 is a homooctomer.	2.88446e-147
NC_014019.1\|WP_013055803.1\|1070614_1071580_-\|DUF979-domain-containing-protein	gnl\|CDD\|377620	pfam06166, DUF979, Protein of unknown function (DUF979). This family consists of several putative bacterial membrane proteins. The function of this family is unclear.	4.36317e-142
NC_014019.1\|WP_013055793.1\|1059873_1060518_+\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	4.54601e-101
NC_014019.1\|WP_013055802.1\|1069958_1070600_-\|pyroglutamyl-peptidase-I	gnl\|CDD\|237299	PRK13197, PRK13197, pyrrolidone-carboxylate peptidase; Provisional.	3.66725e-129
NC_014019.1\|WP_162485294.1\|1061921_1064462_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.49269e-103
NC_014019.1\|WP_013055789.1\|1054430_1055069_+\|SdpI-family-protein	gnl\|CDD\|227945	COG5658, COG5658, Predicted integral membrane protein [Function unknown].	8.22452e-21
NC_014019.1\|WP_013055807.1\|1075214_1075772_-\|HPP-family-protein	gnl\|CDD\|377434	pfam04982, HPP, HPP family. These proteins are integral membrane proteins with four transmembrane spanning helices. The most conserved region of the alignment is a motif HPP. The function of these proteins is uncertain but they may be transporters.	4.7191e-29
NC_014019.1\|WP_013055804.1\|1071580_1072285_-\|DUF969-domain-containing-protein	gnl\|CDD\|368767	pfam06149, DUF969, Protein of unknown function (DUF969). Family of uncharacterized bacterial membrane proteins.	7.57456e-110
NC_014019.1\|WP_013055799.1\|1067312_1068434_+\|class-II-histone-deacetylase	gnl\|CDD\|212521	cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII. This subfamily includes bacterial as well as eukaryotic Class II histone deacetylase (HDAC) and related proteins. Deacetylases of class II are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues of histones (EC 3.5.1.98) and possibly other proteins to yield deacetylated histones/other proteins. Included in this family is a bacterial HDAC-like amidohydrolase (Bordetella/Alcaligenes species FB18817, denoted as FB188 HDAH) shown to be most similar in sequence and function to class II HDAC6 domain 3 or b (HDAC6b). FB188 HDAH is able to remove the acetyl moiety from acetylated histones, and can be inhibited by common HDAC inhibitors such as SAHA (suberoylanilide hydroxamic acid) as well as class II-specific but not class I specific inhibitors.	0
NC_014019.1\|WP_013055801.1\|1069000_1069729_-\|flagellin	gnl\|CDD\|183759	PRK12804, PRK12804, flagellin; Provisional.	9.28061e-84
NC_014019.1\|WP_013055806.1\|1073637_1075107_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|226987	COG4640, COG4640, Predicted membrane protein [Function unknown].	2.10657e-42
NC_014019.1\|WP_013055792.1\|1057284_1059816_+\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	3.15198e-113
NC_014019.1\|WP_013055797.1\|1064969_1066349_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	4.83572e-40
NC_014019.1\|WP_041816508.1\|1072661_1073573_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|372305	pfam12773, DZR, Double zinc ribbon. This family consists of a pair of zinc ribbon domains.	1.45989e-05

>NC_014019.1|WP_162485294.1|1061921_1064462_+|EAL-domain-containing-protein
MSNIAYNNIKEIDKRRRHEILPDENTEKEQSIMIMKRLDRLNTQLLKEYSEGIFFINCEGDIMFSNEAAFKLTGNEHKEKSQQLTALIHTSKQQQAQDFFQRALQGEKVQFSTTINHNTKKELHLDITLIPIIVSEQVAGVYAVCRDDSKEQERSNHISKLETHLKMEQKLANVGSWYYDVREDKSYWSPQLYNIYGLNPNQHFTPSLKNVLQFVNRCGQKRLEKAVMEALSTGGSYTIEYTLLRPSGEERTVFEQADALVDEQGNIVQLIGVVHDITESKVITNELKQKEQQFQTIYNNLDAGIWSVDVQSNEMIVCSSGVSNIYGEDAAKFLGNRDLWESFIHPEDKPAVAKGQHQLQKGKMIRQQYRIYTKTGEMKWVKDRCIPTLDENGKLMRIDGIVEDITAEKKYMDHVEYLATHDHVTNLPNRRKFERELKNFIRQMKKERDLLAVFYLGLNRFKHINDTLGHDVGDRLLRRIANRLKKCVTLDVMLARAGEDELAICFLSLAHIHECQKLAAALLQEIEKEITIDDFSLCVTASIGISIYPHDGEDAKMLLTNANLAMRRAKEVGRSDWQLYSPLMDSETYKSYHLEKGLRNALLQDEFFIEYQPKVHTNSREIDSIEALIRWNHPEWGRVSPEDFIPLAEETHLIIELGDWVIQHVCKQLQQWKNQGLQIVPVSINVSSKHLLKSGFVEHVQQTLAHYNIDPSFIEFEVTESSIIQYEEHVKKVMDELKKIGVTFALDDFGTGFSSLSHLKDFEFNTLKIDKTFIQHATDKGKQQAITKSILYLAHALNMKVIAEGVETKEQLAFLQKHECSFIQGYIVSQPAAPQKIAEYLKKPFL
>NC_014019.1|WP_013055795.1|1061532_1061811_-|hypothetical-protein
MTQSPKKYDLFSRGSFQTAAFLLLFSPLFTRLFQQNVWAYITVASIIILFNFITECILVKRISAVPKNYIAFFQTICLPVNILLLCFFYYVT
>NC_014019.1|WP_013055794.1|1060566_1061496_+|NAD(P)/FAD-dependent-oxidoreductase
MQHVDVLIIGGGPAGISAAVWCKRLGVDCLLLEEQAQLGGQLFTIYNEIIDYPGIQAENGIEMQRKMVQHFIDMGCLYEVNTKVISIDERSKTVKVKQQETEKEISYTYLILATGSSQRKLGVPGEQQMIDRGEVYSASADGERLKGKRVALIGGGDRAFEGAHLLASQAKQVYLIHRSTHFKAREQYVEKVLSDPGVKVMTDTEVTAIHGKHHVTSIDLKSKNSECKNLSVDAVLIRLGIAPNVELIKEKVTTTQSGLIVINEVHQSSDPAIYAIGDACTTPLFSSISSSAGQGAIVAKYVSSLLKKS
>NC_014019.1|WP_013055793.1|1059873_1060518_+|GTP-cyclohydrolase-I-FolE
MALSTQNLIAQKFLETLGTNSTEIDKKIGQADTFMNAVKELIDLCGDNPERDGLEETPYRVLKAFLEYTEGYREDPKAHLEKTFDVNHNELVLIRDIEFHSMCEHHFAPFFGVAHVGYIPDKKITGLSKIARTVEGYAKRFQVQERLTNEIADAIEEVLEPKGVMVIIEAKHMCMCGRGIKKSSASTATSSVRGTFMEKPEVRGEFLSLLQRQM
>NC_014019.1|WP_013055792.1|1057284_1059816_+|EAL-domain-containing-protein
MSIKKKLSVFFTLLVLCILLANNTLHYIRSKNRLIEFNKKEITLVTEEIAYEVENSKNSASYMENRMAQELRTASIAIQDSLPADYHDVSNDQLKRLAKKLMISHITLLAPAGDDIIGVKSSDPKEINMSTKEWGYWYTSFRQLLSQQTITTKKGVTLPHFWSGPIEVASSNPNHIDKWGYYYDGSTNYIIDPYFRDRHVLDFEKRFGPTNVMNRFTENLEGVLELTVFNPKNFGKRNQNVYLNGNKYIKIKDQPIWYGTYTYRNTERDKKSIQEVLKTGKSQSYLAEINHKKVLKTLVPIKEKNTPAYVIGVVYDYGLIEKELQQELIKHLLLSLPFIFIVLIISFIFSTSITRPIKHIMEHVNQIAKGNFGKVLNTRRKDELGGLVANINHLSHFLKTYVDDLKKSQEESEYHAYHDFLTGLPNRRYFKEQLNRRLIESKEKSIRHVAVLFMDIDRFKDINDTLGHSKGDQLIQLIANRIKECLPSANSFLTRQGGDEFVILFSDFTPEEVKGITEKIMAYVQQPCYIDNDEVFVSISSGLSFYPEHSTNLDTLITYADVAMYASKRQGGSKVSIYHDSLNKKQAEKVHIETRLRKAIQKGDIDVYYQPKIEAKRNVITGVEALVRWNDAELGFVSPEAFIPIAEEAGLIQYLWEVVMKKACSQVSEWNKVSDEKMTLAVNFSPRQFQDPVVLVNEIKHFLSLHRFDPAWFEMEITESTLLMNAEETIKALHLLKKYGISISIDDFGTGYSSLSYLKKLPIDCLKIDRSFIQDIQEDYSNSEIAQAIISLSQSLKLEVIAEGVEEEYQKAFLMKNGCDHMQGYLFSKPLAAEDFEEAFLNS
>NC_014019.1|WP_013055791.1|1056747_1057017_+|hypothetical-protein
MNKQPWHRSEKFLLLLCFFAPPIGYVAVIVNKKKLSRELWLSNLTVATIIMSIWLLKFLPHQWGTIILLTGAGIYWYQRIVKKFKKQHR
>NC_014019.1|WP_041816506.1|1056532_1056751_+|hypothetical-protein
MKFFKDASKREHQNWNKAVSAGFYILLLLLFVNIIMYTYKGAELVSSSSMFWTGIVVTFGYQFILNRKSEKK
>NC_014019.1|WP_013055790.1|1055218_1056211_-|DUF3231-family-protein
MNAESKRLTSTEITSLCAQYHQDTLAVCVAKHVLATVTDAEIRSLFGFSLKLSEKHIELLTAIFRAEHFPLPNGFTDEDVDLHAPPLFTDSFWLKYLHDMTIHGLSGYGISFSVSIRRDIRDYYHQCNLDAMEIYNRSLDLLLAKNLYVPAPYFLNPKKQESITDLSYALDFVGKQRLLNANEAGNIYFNLRKSMVTKALLIAFKQVSKRKDVRKVMETGLDVAHKHIELYSSIMHEENLHTPPLLDNEITTSTHAPFSEKLMTFHAGAMFKVAITYYATAMTTSMRLDIVGHCEACILRDLKVAGRCSEVMIKNGWIEKPPEASDRKQM
>NC_014019.1|WP_013055789.1|1054430_1055069_+|SdpI-family-protein
MKKHVFPLGITLLTLIAWLIALPHLPATMPIHWGANGEADGFATKINAMILTVGIMALIYFIIAFVPRIDPRKENYKYFSKTYNILLNAVLLLFFFVNMSTILQGLGYNVPMSYIAPIMAGLVFIIIGNYLQRVRSNYFMGIRTPWTLSNETVWKKTHRLSGKLFFIGGLLILISAFLPDGYKSVIMWGSIVLCVAIPYLYSYLAYKKEMNM
>NC_014019.1|WP_013055788.1|1054166_1054430_+|winged-helix-turn-helix-transcriptional-regulator
MNETFKALADPTRRKILELLKERDLTAGEISEYFNMTKPSISNHLKILKQADLVQDEKRGQFVIYSLNTTVFQDLIGWFFSFQKGEN
>NC_014019.1|WP_013055797.1|1064969_1066349_+|APC-family-permease
MEGKPSATFVRTLTLRSLVILGLAYMAPMTVFTTYGVVAQTTHGMVSMAYVLALAAMLFTAYSYGHMAKEYPLSGSAYTYTQKSISPHIGFLVGWSVLLDYLFLPMINFLLAGTFLSAAFPSIPSSLWILLFIVIITCINVFGIQMTAKVNGILVLFQFFVTALFVILSIKKMIEGESDLLFFSSLQLFDSKDSFSFVLSGASILCLSFLGFDAVTTLSEETVDPKKNVPKAIFLVAFIGGILFILVSYITQLVYPNYHSFKVVDSASFEIAAYIGGTLFSSVFLAGIITSTIASGISSHASASRLLYAMGRESMLPKRLFAYIHPKYKTPSRNVIFIGVLSLSALAMDVVTAASFINFGALIAFTFVNISVIFHYYIRGKQRDFKGTCRYLISPIIGAVFTVWLWTSLDIKSISLGSIWVVIGFIYLVYKTSFFTKAPPQFAFDEKTEPNQLKTEHIS
>NC_014019.1|WP_013055798.1|1066401_1067274_+|carbon-nitrogen-hydrolase
MKETVKVGLIQVECEESVEANINYTFTKIKDAAANGAQIICLQELFNAQYFPQSVSPAGYELAIPAESSVLKEMAELAEELKVVLIVPFYEKAARGVYFNSAAVFDADGTCLGITRKNHIPDGPNYHEKYYFVPGNTGYPVYETQYGVIGVGICWDEWFPEVARILSLQGADILFYPSAIGSEPDHPELSTRPAWEKAISAHGISNGVFVAAVNRVGTEKEMTFYGGSFVSNPMGEILQSLTDEEGILIQEVDLKEIDSTRNLLQFMRDRRPDTYELLLKKEAFRAPSNV
>NC_014019.1|WP_013055799.1|1067312_1068434_+|class-II-histone-deacetylase
MIHKTSWIWDDRFLRHNTGKIQYVFEGGETVEPCDEFENKHRMNVIKEMIEKSGLVHHLVRQSPYEASDEDLLRVHTKNHIGHVQKACEAETREVGPEAYASAETEGIARLSAGAVMKAVDTVMESETISKVYAQIRPPGHHASSDQAMGFCFYNNVAVGAAYAIEHYGLKRVAILDWDVHHGNGTQDIFYERDDVLVISIHEEDYFPLESGQVYEIGQGKGEGYNVNIPVPSLTGDEGYQYVFESIIAPVISQFEPELIIISAGQDANALDPISRLMVTREGFKYMANKVRELAETYCEGRLIVAQEGGYNLAYLPIATMGVIEGLTGVDVNWKDPHVLPHRTTPTALFQAVDNVVNYQKRFWKFAEKESFC
>NC_014019.1|WP_013055801.1|1069000_1069729_-|flagellin
MRINHNITALNTYRQYNTANNAQAKSMEKLSSGQRINNAADDAAGLAISEKMRGQIRGLDQASRNAQDGVSMIQTGEGALNETHSILQRVRELAVQSSSDTNTTDDRAEIQKEVTDLISEVDRIATDTEFNTQKLLDGTGGNAGKFTFQIGANKDQKIDVTFAKMDSTSLGVKDIDLSVDAAISTAAIDTIDTAIKNVSDERSQLGAKQNRLEHTINNLSTSSENLTAAESRIRDVDYALAA
>NC_014019.1|WP_013055802.1|1069958_1070600_-|pyroglutamyl-peptidase-I
MTTVLLTGFEPFEGESINPSLEAVKTLDGVAVEDYRIIAKPLPTVFGESLSKLHTYIEEISPSIVICVGQAGGREGITVERVAINVDDARIPDNIGQQPIDRPIIENGPAAYFSTLPIKAAVENLRQAGIPSSVSQTAGTFVCNHVFYGLMNMIQNCCIKGGFVHIPYLPEQAVNHPGKASMSLDLIVQGLLSIAKTTIVTEDDILVSGGATH
>NC_014019.1|WP_013055803.1|1070614_1071580_-|DUF979-domain-containing-protein
MKSILTLDTIYYLLGIIVAFIAIRIARDPNHPNRLGSSLFWALFSITFLFGNVIPPFYVGCLVIIMVLLASFNRVTKSNEAETPAEERVAHAQRLKNKIFLPALFIPIFTIIGTLLFGKIKFGNWALIDPEKVTLISLAIAAVIAFIASMGVTKAKMDVPVKEGSRLLQAVGWAVILPQMLAALGGIFSKSGVGTVVSDIVSDVLPTNYAFVAVLAYCLGMLLFTIVMGNAFAAFAVITGGIGLPLIVHMHGGNPAIMAALGMFAGYCGTLLTPIAANFNVVPAMLLELKDKNAVIKAQVPIALSVFVINTLLMYYLVYHF
>NC_014019.1|WP_013055804.1|1071580_1072285_-|DUF969-domain-containing-protein
MLKLIGVLLVAVGFLFRLNTLLVVTVAGIVTGLVSGLSLHEVITMFGQFFVDNRYMSMAILLTLPIFGVLEKYGLKEQAEVLIKKAKNASSGNVLLIYLFIREISAAVGLNIGGHAQSVRPLVAPMSEGAARAKYGELPPKVKEDIRAHAAAAENTGWFFGEDIFIATGGILLMKGFFDSVGIHVDVWDMALWGIPTAISALVISAIRFRQLDRRIHKKMTKHKPTSSSKTEAS
>NC_014019.1|WP_041816508.1|1072661_1073573_+|zinc-ribbon-domain-containing-protein
MNCSNCGHLNDGGKFCVKCGHKLQEEAAVSQTAAASEYQSQSQPQTAYVPQQPNQRVRQAKKVSKSFFSYFTEGIKNPTATAHAAGESQFVNALITVILYALSIPIMLYVGWKLLLIQFVRSMFKLPIISEELAPSDMEDFNTGTDLIKATDINSIIHFNFTDFVFKQGIFIFIGLAVIIGATYVAAKFGKVDVSFKEFFSRFGTFMIIPTALLLIGLVLAFLHVEYFSYFMNFGLLSIFLVVPFTIASFKQSGTNGLDRIYSTLIVYVVITIVLTFIANGLGEEAKTIITRMGNSSELNDLF
>NC_014019.1|WP_013055806.1|1073637_1075107_+|zinc-ribbon-domain-containing-protein
MGYCRECGHQLTNEHEFCPECGHPVERKAASSEGAASQRYAEPASSSVEEGRQSVKPSNKKTKVITISVIAAAAILGGAYYGIDKTMMAPKAVSEKFIASVKGNDVDKVKKYVNDGQIQLEANDEQTKSFITYLHENPDVMKSISEGLAADSRALEAGVPSEDHSSYAKLEQDGKKWGIFDHYTVQINPVYAKAQSTEDATVVYIDGQKAGTVSSDSSKKVGPFLPGTHIVKGEVQNDYGKVENEQEIEATNGEDVDVEFDWSDHAVYISSDYDDATLFVNGKDTKTEIGDIDYLGPLPMDGSIKIYAKRKFDSGEKKTEEVSIKKGIEDVALNFDEENTTEATAKASASSKNQETRGKGSEVNSGVSTSEVSSFIEQYMYATISSINSGDFSVAEPYIDSNGPKYKEQKDYTAYLIKKGITEDLLSFNVNRVTKIDDSMYKVYTTEEYDISYGDGSVKYKKFNSIHKVKELSDGSLGVYQLISSTEVK
>NC_014019.1|WP_013055807.1|1075214_1075772_-|HPP-family-protein
MEFEKSFSQSKSPFLSYLSSYTKKMKGELKEEPKINYRDAVVSSIGGLIAIIISSAIALALGYPMALAPIGASCVLVFGAHKGPLSQPRHVLGGHLLATVSALIIWSLFHRSLITIAIVLAFVLILMILTKTVHPPAAASAIVAINTQAGWGYLGIIMICACVVVLISTVYNNLFQDRQYPRYWV

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Crispr_ID: NC_014019_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014019_4

1554840-1554922

Orphan

Consensus_repeat	Method
TGATTTTTGGAAGTAGCTTCTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014019_4

>merge|NC_014019|4|1554840-1554922|CRISPRCasFinder
TGATTTTTGGAAGTAGCTTCTCCGCCTTTTTCACCAATTTCTTGGTAAAACTCTTTGTCATGATTTTTGGAAGTAGCTTTTCC

>NC_014019|4|4|1554840-1554922|CRISPRCasFinder
TGATTTTTGGAAGTAGCTTCTCC	GCCTTTTTCACCAATTTCTTGGTAAAACTCTTTGTCA
TGATTTTTGGAAGTAGCTTTTCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014019.1\|WP_013056290.1\|1560534_1561776_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|236549
NC_014019.1\|WP_013056289.1\|1559224_1560208_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380514
NC_014019.1\|WP_013056275.1\|1549057_1549684_+\|LysE-family-transporter	unknown	unknown	gnl\|CDD\|280058
NC_014019.1\|WP_013058452.1\|1558924_1559134_-\|alpha/beta-type-small-acid-soluble-spore-protein	unknown	unknown	gnl\|CDD\|365990
NC_014019.1\|WP_013056274.1\|1548654_1548891_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013056277.1\|1551225_1551366_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013056278.1\|1551410_1551563_-\|YpzG-family-protein	unknown	unknown	gnl\|CDD\|372924
NC_014019.1\|WP_155660526.1\|1553889_1554036_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013056285.1\|1556714_1558100_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182694
NC_014019.1\|WP_013056276.1\|1549811_1551155_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NC_014019.1\|WP_013056292.1\|1563527_1564988_+\|YdiU-family-protein	unknown	unknown	gnl\|CDD\|234583
NC_014019.1\|WP_013056279.1\|1551788_1553462_-\|ribonuclease-J	unknown	unknown	gnl\|CDD\|223668
NC_014019.1\|WP_013056283.1\|1555199_1555424_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_041816660.1\|1554267_1554684_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013056280.1\|1553680_1553821_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_041816661.1\|1561797_1563255_+\|glycoside-hydrolase-family-32-protein	unknown	unknown	gnl\|CDD\|224536
NC_014019.1\|WP_013056272.1\|1547668_1548517_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293807
NC_014019.1\|WP_013056287.1\|1558634_1558835_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013056286.1\|1558256_1558478_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013056284.1\|1555520_1556252_-\|zinc-transporter	unknown	unknown	gnl\|CDD\|223505

Protein	Function_ID	Function_description	E-value
NC_014019.1\|WP_013056275.1\|1549057_1549684_+\|LysE-family-transporter	gnl\|CDD\|280058	pfam01810, LysE, LysE type translocator. This family consists of various hypothetical proteins and an l-lysine exporter LysE from Corynebacterium glutamicum which is proposed to be the first of a novel family of translocators. LysE exports l-lysine from the cell into the surrounding medium and is predicted to span the membrane six times. The physiological function of the exporter is to excrete excess l-Lysine as a result of natural flux imbalances or peptide hydrolysis; and also after artificial deregulation of l-Lysine biosynthesis as used by the biotechnology. industry for the production of l-lysine.	1.55931e-25
NC_014019.1\|WP_013056276.1\|1549811_1551155_+\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	8.83053e-119
NC_014019.1\|WP_013056290.1\|1560534_1561776_+\|MFS-transporter	gnl\|CDD\|236549	PRK09528, lacY, galactoside permease; Reviewed.	0
NC_014019.1\|WP_013056289.1\|1559224_1560208_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380514	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs. This group includes the ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus metalliredigens (strain Qymf) and its close homologs. Qymf is a strict anaerobe that could be grown in the presence of borax and its cells are straight rods that produce endospores. This group is a member of the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	6.31158e-109
NC_014019.1\|WP_013056278.1\|1551410_1551563_-\|YpzG-family-protein	gnl\|CDD\|372924	pfam14139, YpzG, YpzG-like protein. The YpzG-like protein family includes the B. subtilis YpzG protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 50 amino acids in length. There is a conserved QVNG sequence motif.	2.24591e-14
NC_014019.1\|WP_041816661.1\|1561797_1563255_+\|glycoside-hydrolase-family-32-protein	gnl\|CDD\|224536	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism].	6.16248e-177
NC_014019.1\|WP_013056285.1\|1556714_1558100_+\|amino-acid-permease	gnl\|CDD\|182694	PRK10746, PRK10746, putative transport protein YifK; Provisional.	0
NC_014019.1\|WP_013058452.1\|1558924_1559134_-\|alpha/beta-type-small-acid-soluble-spore-protein	gnl\|CDD\|365990	pfam00269, SASP, Small, acid-soluble spore proteins, alpha/beta type.	1.44763e-21
NC_014019.1\|WP_013056292.1\|1563527_1564988_+\|YdiU-family-protein	gnl\|CDD\|234583	PRK00029, PRK00029, YdiU family protein.	0
NC_014019.1\|WP_013056279.1\|1551788_1553462_-\|ribonuclease-J	gnl\|CDD\|223668	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair].	0
NC_014019.1\|WP_013056272.1\|1547668_1548517_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293807	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Bacillus subtilis yflN protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.29952e-71
NC_014019.1\|WP_013056284.1\|1555520_1556252_-\|zinc-transporter	gnl\|CDD\|223505	COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism].	9.95723e-14

>NC_014019.1|WP_041816660.1|1554267_1554684_+|hypothetical-protein
MNLHDFVHGVDPTIKLVIEDEFPGTRCVGGKYVPSTHSIFLYEKDIKIQCRHLFGSNECLESYQWIILAHELGHALDEDLLSLSAKFDQTEDIGLLYQIECNAWEIGKKLIPFINSELFSSIKDQSLAHYHKEMEKIS
>NC_014019.1|WP_155660526.1|1553889_1554036_+|hypothetical-protein
MSENKNSQYKEENKSTPSRPLEYKERTNESQSTSQMLRSILEYSSRYR
>NC_014019.1|WP_013056280.1|1553680_1553821_+|hypothetical-protein
MSKQNKSTNQGVSSSAAAVDNVNKSILSNDIHTDELQKAKVSRHNK
>NC_014019.1|WP_013056279.1|1551788_1553462_-|ribonuclease-J
MSTNRNTLSIFALGGINEIGKNMYAVQYDDDIIVIDCGSKFPDESLLGIDLIIPDITYLQENREKVRALVVTHGHEDHIGGIPYLLKQLNLPIYATSLTLGLIDIKLQEHQLSAETELIEINEESEITLGNIPLSFFKTNHSIPDCLGIVFHTPEGAVVHTGDFKFDLTPVNDQYPDLHKMAKIGSEGVLALISESTNAERPGFTPSEKLVGKHVEEAFRKAKRKVIISTFASNVNRVQQIVDAAIKTNRKLALLGRSMVNVVSVALEKGYLTIPEGMLIEPYEVHSLAPEQVAILCTGSQGEPMAALSRLASGNHRQVEILPEDTVILSAGPIPGNERNISRIVDSLFTLGAHVIYGSGSATGMHVSGHGYQEELKLMATLMKPKYFIPIHGEFRMLHHHSLLAESVGVEKENIFIINNGDIVDIKGGTAVQTRKIPAGNVYVDGFGIGDVGNAILRDRKQLSEDGMLVIVVTLNKAEGKIVSGPDTISRGFVYTRDSEQLLKDVNRQVTKIVNQLQKTHVHQWSIMKKEIKTTLGQFLYNQTKRRPMILPIIIEV
>NC_014019.1|WP_013056278.1|1551410_1551563_-|YpzG-family-protein
MNDKNQVDQHSELFRHNWTRPKRSKSQVNGHTEMSQTNIILRSNAKAHRW
>NC_014019.1|WP_013056277.1|1551225_1551366_+|hypothetical-protein
MPKNKQTPSSQVDQKQIVDDKAKALRENNYEDGHIRKITQSGADGQ
>NC_014019.1|WP_013056276.1|1549811_1551155_+|amino-acid-permease
MKKKIGCGSQVEGKLKWWQLSLIGVGCIIGTGYFLGSSIAIKATGPSVLIAFLLAAVCTFIVFDALAKMSAQDPQKGSFRSYAKKAYGRWAGFSSGWVYWSSEMLIMGSQLTALSLFTRFWFDGIPLWVFASIYAVLGIAVVLIGTKGFERMENVFAVTKVAAILMFIVLASLALFGFLDQGAKQGLPRTISEVLPHGFLGLWGALLYAFYAFGGIEVMGIMTVRLEKKEDAPKAGRSMLILLGIIYIVSLSLAILIVSFHDFHGNQSPFITALETYHLPFFPHVFNGAMIVAGFSTMSASFFSVTTMIVTLSEDGDAPALFSKQKKKKLQFPLPALLLTTAGLVVSIVLSLLLPGKIYEYITTAAGLMLIYNWFFILISFHRLIKQTVWDKVKQAVGLLLILLAVSGTLLESASRPGFFASLGFLIVISLVILKLRHKWKEEEATS
>NC_014019.1|WP_013056275.1|1549057_1549684_+|LysE-family-transporter
MGAFFSYMLLGLSLAAPIGPINAAQLDKGIKNGFLHAWFLGIGATSVDALYMLVVYFGSVHFLSSDFMKTFLFSFGCFVLIYTGIEGLMSTGKITQHRNAKGDSVLKCFFSGFLISLTNPLTILFWLGIYGSVLAKTANTYETEQLILYSCAIFTGILCWDIAMAALASTFRRYLAATFLTAVSVISGLSLIGFGIYFGWQAVQQFII
>NC_014019.1|WP_013056274.1|1548654_1548891_-|hypothetical-protein
MNSYTHIKEALQLAEQAVYQGQMNLDAANFQKAQMHLNMVQQQINEQKEAASGDKELRRMEEHLRHLREAQQAIQQNF
>NC_014019.1|WP_013056272.1|1547668_1548517_+|MBL-fold-metallo-hydrolase
MNREMHGSSSTESFIPMSSIASGKGVEVAPDIYSYTTQIVNVCFIGNPDKDNSFVLVDAGMPNSASMIIKEAEERFGKGKKPKAIILTHAHFDHIGSIIELVEKWQIPVYAHPLELPYVTGKKNYPTPDGTVEGGLVAKLSPLFPTEAIDLGSHVQALPADGSVPHMPQWEWIHTPGHSPGHISLFRKQDLALIAGDAFVTTKQEYLLDVLEQELEISGPPRYLTTDWASAKRSVEVLQSLYPSVAVTGHGKPVSGEWLSTNLLKLTKNFDEIARPDYGKYV
>NC_014019.1|WP_013056283.1|1555199_1555424_+|hypothetical-protein
MSKYVEMDNASLRQKIQEYKELIWRVGPGSERTIEAVQEIQGMEKELKARNAEFEATDWKAFTREIKENYDFTY
>NC_014019.1|WP_013056284.1|1555520_1556252_-|zinc-transporter
MWQAAMWGGISGSAVLLGALAAVFLPIGKKIIGYIMAFGTGVLIGASTYELLGDSVHNGGLKATSLGFLAGAVVFTFLDYLISRQGANKRKRSTKQMAANSSGIAIFIGTVMDAIPESIMIGASLIENATVSWLLVIAIFISNIPEGLSSTTGLVKSGFSKKKIFLLWAAVLFISAFSSWTGFVFLDHASETLMAAIAAFAGGGIIAMVGSTMMPEAYEEGGSITGLIAALGLLASLILDHFS
>NC_014019.1|WP_013056285.1|1556714_1558100_+|amino-acid-permease
MADKELKRGLESRHIQMIALGGTIGVGLFMGSASTIQWTGPSVLLAYAICGMFIFFIMRAMGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPHLPAWVPGIIAMLILGAANLISVKSFGEFEFWFAMIKIVTIILMIIAGLGLIFFGFGNGGDAIGLSNLWAHGGFFAGGWSGFFFALSLVIAAYQGVELIGITAGEAKDPKKTLTSAIQSIIWRILIFYIGAIFVIVTVYPWNELDSLGSPFVSTFAKVGVTAAAGIINFVVITAAMSGCNSGIFSAGRMLYTLGVNGQAPKFFTKISRNGVPIYSTLAVMIGLVIGVILNYIAPPNVFVYVYSASVLPGMIPWFIILISQIRFRKAKGAEMDSHPFKMPFAPVTNYVTIAFLLMVLVGMWFNDETRISLIVGIIFLALVVISFYAFGINKRMIPDTENGQIKK
>NC_014019.1|WP_013056286.1|1558256_1558478_+|hypothetical-protein
MRSHRYIIKDSLKADEVARDLELQLDINRMSDVRILSVNAQNEILVQMEEENEEAGDVIDVFMKEYKTAEIIE
>NC_014019.1|WP_013056287.1|1558634_1558835_+|hypothetical-protein
MKVKRNGEGHVFFIILGGLFILIGTLFANTSVYFLISGWIAAVCCLGISAVLKKGKTKSVSKEEEE
>NC_014019.1|WP_013058452.1|1558924_1559134_-|alpha/beta-type-small-acid-soluble-spore-protein
MANNKSSNNNELLVYGAEQAIDQMKYEIASEFGVNLGADTTARANGSVGGEITKRLVQLAEQQLGGGRF
>NC_014019.1|WP_013056289.1|1559224_1560208_-|LacI-family-DNA-binding-transcriptional-regulator
MKAKISDVAKIAGVSPTTVSRVLNNRGYISKETRENVYKAMKEINYFPNDIARSLFNKRTNLIGMIVPQTSNPFFGELAFHIESICASLNYKVLLCNSLNRIDKEKKYVEMLIRNQVDGVIAVTYNRGIFDSESQSLPVVAVDHYLSKDIPTVSSDNYSGGKQATELLISKGCKHIVHINGPLKLETPANLRRKAYENVMKKDRKQPITYEISNTFDRNIQRETISKVFEEHPEVDGIFASDDLLAALVVAEAQKRGKNIPRDLKIVGYDGTEASQTLLPGLTTVQQPIESIAQTAIDILLKEIEGEFSNIPREICLPVKLLEGQTT
>NC_014019.1|WP_013056290.1|1560534_1561776_+|MFS-transporter
MKSSKSLYWKLSAYFFFFFFTWSSSYSLFSIWLGQEIKLNGSATGLIFSVNAIFALCMQPLYGYISDRIGLKKHILFFISCLLVFVGPFYIFVYGPLLQYNVLIGAIIGGLYLGVAFLAGIGAIETYIEKVSRKYKFEYGKSRMWGSLGWAAATFFAGQLFNINPHINFWVASVSAVILMAIIFSVKVEMSSYEMEKAESVRLRDVGNLFLLKEFWFFMIYVVGVTCVYGVYDQQFPIYYASLFPTESIGNQVFGYLNSFQVFLEAGMMFAAPFIVNKIGAKNSLILAGFLMGFRIIGSGLVVGPIGISSMKLIHALELPIMLIAIFKYLAANFDTRLSSILYLVGFQFASQIGASVLSPIAGGLYDSVGFSRTYLIMGGMVLVFNVISMFTLLNSKKHKFIRKDVQEKTQII
>NC_014019.1|WP_041816661.1|1561797_1563255_+|glycoside-hydrolase-family-32-protein
MNKIEQAQHSLNEAEKKVNHQYRLGYHIMAPANWINDPNGLVQYKGEYHVFYQHHPYDENWGPMHWGHVKSKDLVHWQHLPIALAPGDTFDKDGCFSGSAVDNEGELTLIYTGHNYIDKELDTFFQNQNIAVSKDGITFEKAETNPVIAEPPADSSHHFRDPKVWKHEDFWYMILGNSTKKKEGRVILYRSSNLRKWEYVGVLAKSGGDLGYMWECPDFFELDGKHVLMISPQGIEAKGDSYHNLFQTGYLVGEYNYETNTFHHGSFTELDYGHDFYAVQTLLDDKGRRIAIGWMDMWEANMPTKEDGWCGALTLPRELTLREDKVLMNPVQELTSLRKTQYNMLTNKALSNSYVVEVNEDLLEIQAVFDLADCQASSVGIKIRGINNEETLMCYNLNEQKLLLDCTHSGKEDGVRKVALQAGETLALRIFVDRSSVEVFANEGQATMTSRIYPKESRLGIELFTEGGNVIVKELTYWNLKDIWG
>NC_014019.1|WP_013056292.1|1563527_1564988_+|YdiU-family-protein
MTNQKETGWNLRNSYAELPNIFFTLLDPNPVSSPKIVKFNDSLAASLGLQKEQLQSPEGVSILAGNSVPKGAFPLAQAYGGHQFGHFNMLGDGRAMLIGEQVTPSGEKVDLQLKGSGRTPYSRGGDGRAALGPMLREYIISEAMHALRIPTTRSLAVVTTGESIVREKELPGAILTRVASSHLRFGTFQFAAKWGTVENLQALADYALERHFPHIEKNEKKYLSLLQEVIKRHATLVAKWQLIGFIHGVMNTDNMTISGETIDYGPCAFMDTYDPETVFSSIDVQGRYAYQNQPGITGWNLARFAEALLPLLDQDIEKAVEIAQSAVTEFPKFYRENWLAGMQAKLGLFNEEKEDEALFQELLTIMKTYEADYTNTFRALTFDKLENSDLFKSKEFAQWHELWQKRLGRQQQSKADSQELMKNNNPAVIPRNHRVEEALDAAQKEDYSVMETLLEVLSSPYESPGQPEYCTPSAPSNQPYQTYCGT

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Click the colored protein region to show detailed information

Crispr_ID: NC_014019_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014019_5

2119143-2119232

Orphan

Consensus_repeat	Method
TCAAATGCAGCCGCCAAGCGGTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014019_5

>merge|NC_014019|5|2119143-2119232|CRISPRCasFinder
TCAAATGCAGCCGCCAAGCGGTTCATCGAACGGCGGTCAAATGCCGGGCGGTTCGTCCAATAATGGTCAAATGCAGCCGCCAAGCGGTTC

>NC_014019|5|5|2119143-2119232|CRISPRCasFinder
TCAAATGCAGCCGCCAAGCGGTTC	ATCGAACGGCGGTCAAATGCCGGGCGGTTCGTCCAATAATGG
TCAAATGCAGCCGCCAAGCGGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014019.1\|WP_013056828.1\|2127467_2128334_+\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|226665
NC_014019.1\|WP_013056813.1\|2113721_2114126_+\|CidA/LrgA-family-holin-like-protein	unknown	unknown	gnl\|CDD\|167253
NC_014019.1\|WP_013056820.1\|2120687_2121092_+\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NC_014019.1\|WP_013056821.1\|2121088_2121976_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NC_014019.1\|WP_013056809.1\|2109581_2110181_+\|DUF3298-and-DUF4163-domain-containing-protein	unknown	unknown	gnl\|CDD\|378702
NC_014019.1\|WP_013056822.1\|2122120_2122795_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_014019.1\|WP_013056815.1\|2115059_2115932_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NC_014019.1\|WP_013056816.1\|2116085_2116562_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_171843275.1\|2112194_2112674_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|226489
NC_014019.1\|WP_013056824.1\|2124548_2124713_+\|YezD-family-protein	unknown	unknown	gnl\|CDD\|378371
NC_014019.1\|WP_013056819.1\|2119729_2120695_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NC_014019.1\|WP_013056825.1\|2125055_2125208_+\|Fur-regulated-basic-protein-FbpA	unknown	unknown	gnl\|CDD\|315692
NC_014019.1\|WP_029321458.1\|2110183_2110450_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013056826.1\|2125459_2126524_+\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224529
NC_014019.1\|WP_013056814.1\|2114095_2114788_+\|LrgB-family-protein	unknown	unknown	gnl\|CDD\|377236
NC_014019.1\|WP_013056810.1\|2110622_2112047_+\|phospholipase-D-family-protein	unknown	unknown	gnl\|CDD\|197210
NC_014019.1\|WP_013056823.1\|2122796_2124176_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NC_014019.1\|WP_013056827.1\|2126618_2127455_+\|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl\|CDD\|131194
NC_014019.1\|WP_013056817.1\|2116630_2117203_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NC_014019.1\|WP_041816547.1\|2113098_2113530_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670

Protein	Function_ID	Function_description	E-value
NC_014019.1\|WP_013056828.1\|2127467_2128334_+\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	2.94181e-146
NC_014019.1\|WP_013056813.1\|2113721_2114126_+\|CidA/LrgA-family-holin-like-protein	gnl\|CDD\|167253	PRK01658, PRK01658, CidA/LrgA family holin-like protein.	6.08572e-35
NC_014019.1\|WP_013056820.1\|2120687_2121092_+\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	1.55329e-22
NC_014019.1\|WP_013056824.1\|2124548_2124713_+\|YezD-family-protein	gnl\|CDD\|378371	pfam10055, DUF2292, Uncharacterized small protein (DUF2292). Members of this family of hypothetical bacterial proteins have no known function.	2.45935e-11
NC_014019.1\|WP_041816547.1\|2113098_2113530_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	8.71451e-17
NC_014019.1\|WP_013056809.1\|2109581_2110181_+\|DUF3298-and-DUF4163-domain-containing-protein	gnl\|CDD\|378702	pfam11738, DUF3298, Protein of unknown function (DUF3298). This family of bacterial protein C-terminal regions is highly conserved but the function is not known. Several members are annotated as being endo-1,4-beta-xylanase-like, but this could not be confirmed, and the structure can be defined as a heat-shock cognate 70kd protein 44kd ATPase.	3.12332e-15
NC_014019.1\|WP_013056822.1\|2122120_2122795_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.02357e-78
NC_014019.1\|WP_013056815.1\|2115059_2115932_+\|STAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	9.66308e-41
NC_014019.1\|WP_171843275.1\|2112194_2112674_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|226489	COG3981, COG3981, Predicted acetyltransferase [General function prediction only].	1.47344e-48
NC_014019.1\|WP_013056826.1\|2125459_2126524_+\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
NC_014019.1\|WP_013056819.1\|2119729_2120695_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	6.07693e-99
NC_014019.1\|WP_013056825.1\|2125055_2125208_+\|Fur-regulated-basic-protein-FbpA	gnl\|CDD\|315692	pfam13076, Fur_reg_FbpA, Fur-regulated basic protein A. This family of proteins is regulated by the ferric uptake regulator protein Fur. This family does not regulate the lutABC operon encoding iron sulfur-containing enzymes necessary for growth on lactate.	9.42134e-08
NC_014019.1\|WP_013056823.1\|2122796_2124176_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.42269e-61
NC_014019.1\|WP_013056814.1\|2114095_2114788_+\|LrgB-family-protein	gnl\|CDD\|377236	pfam04172, LrgB, LrgB-like family. The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control of murein hydrolase activity and penicillin tolerance.	1.63516e-76
NC_014019.1\|WP_013056821.1\|2121088_2121976_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	2.50371e-163
NC_014019.1\|WP_013056827.1\|2126618_2127455_+\|sulfate-ABC-transporter-permease-subunit-CysT	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	1.94268e-142
NC_014019.1\|WP_013056817.1\|2116630_2117203_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	2.2175e-41
NC_014019.1\|WP_013056810.1\|2110622_2112047_+\|phospholipase-D-family-protein	gnl\|CDD\|197210	cd09111, PLDc_ymdC_like_1, Putative catalytic domain, repeat 1, of Escherichia coli uncharacterized protein ymdC and similar proteins. Putative catalytic domain, repeat 1, of Escherichia coli uncharacterized protein ymdC and similar proteins. In Escherichia coli, there are two genes, f413 (ybhO) and o493 (ymdC), which are homologous to gene cls that encodes the Escherichia coli cardiolipin (CL) synthase. The prototype of this subfamily is an uncharacterized protein ymdC specified by the o493 (ymdC) gene. Although the functional characterization of ymdC and similar proteins remains unknown, members of this subfamily show high sequence homology to bacterial CL synthases, which catalyze the reversible phosphatidyl group transfer between two phosphatidylglycerol molecules to form CL and glycerol. Moreover, ymdC and its similar proteins contain two HKD motifs (H-x-K-x(4)-D, where x represents any amino acid residue) that characteriszes the phospholipase D (PLD) superfamily. The two motifs may be part of the active site and may be involved in phosphatidyl group transfer.	7.71414e-62

>NC_014019.1|WP_013056817.1|2116630_2117203_-|GNAT-family-N-acetyltransferase
MIQVKDIYGNLPTLETERLRLRKVTKKDVRDMFEYASNEKVSRYVNWEKHRKLQDTKEFVSFVLKQYSNQSISPWAMEIKALKKCIGTIDFVTWNPTHRIAEIGYAISEAYWNKGFVTEAAEKVIAFGFEEMDLVRIQARCFIENAASEKVMKKIGMSYEGTIRKAMFIKGAHQDLKLYSILREEYTRNA
>NC_014019.1|WP_013056816.1|2116085_2116562_-|hypothetical-protein
MLEQAIQHLDLSAHGLWFPITVSLCLFILAFVLFKRKLTWRDFYITFSVVGFVGWLCDVIITRVFNVIDLGDPKATGLGDILSYTFIPPSLSVLFLTYLTAKNKWVLSLLFCAGSLLIEYGMIKSGYMHLNGWFFIYSIVVYLLVYAFVLPWHIAFIK
>NC_014019.1|WP_013056815.1|2115059_2115932_+|STAS-domain-containing-protein
MKEELVYIGKKIIEHKYNLSEKLAERLDATHPLSTEELKEKKILKWRVSIMEYFGRVLFEEQEAVLKLVKEWALATGKYAVEKNIPLEKALGTLPIYRSVIWDVFTRELEEHQFAAITMLHVSERIDPLLDTVTCIFGQIYDEHNRYMMNLAYTSLEELSVPLVPVTKGIAIMPIIGEIDTHRSQVIMETCLKKGTSLQLAYLILDISGVVIIDTMVADNLFKIHQALKLVGVEAIITGIRPEIAQTVVKLGINFNQIKTEANLEAALLKIGFRRSEEHRPTHLSSRRIK
>NC_014019.1|WP_013056814.1|2114095_2114788_+|LrgB-family-protein
MQEFFIAVFIIVATVALYLVMAKVYVRFSYPILIPVLTTTIFVILLLLTFHVSYDEYMIGGKWINSLLGPAVVALAYPLYKQREMLVKYSVPIIGGVFVGLFAGMISGLVFAEVFGIDRSLILSIIPKSITTPVAIQIATGLGGVPSMTVVFVMIAGFSGVILGPLLLKWIRIKSSLGKGIALGSASHALGTSKAFEYGELTVSMSSVSMTLSAVLGSVFGPIVVWLFQV
>NC_014019.1|WP_013056813.1|2113721_2114126_+|CidA/LrgA-family-holin-like-protein
MKVIRIILQIAILYAFSMIGEAVHHMLHLPIPGSIIGLILMLICLMCKIVPIKVIEDGASFLLSFLPLLFIPAMAGVMNYPSLLSSSGAVLFLIIVLSTIVTMAAAGIASQLLEKKANKRKEKQQCKNSLSRSL
>NC_014019.1|WP_041816547.1|2113098_2113530_-|MarR-family-transcriptional-regulator
MQEKNSIELIEYELTTFIRRAVYLDNSENKIGNLERSAYLLLRQLDEFGPARVKELAEAFKLDISTLSRQAAALENKQLISRSSDPSDGRVSLFDITARGKRMLQSDKQMRLERYHSMLKKWSREEKELFGKLLMRMNDAFID
>NC_014019.1|WP_171843275.1|2112194_2112674_+|GNAT-family-N-acetyltransferase
MSFYHEWKASGEKMIPWVIAKDPTHFEEMIQELINAEKGIGLKKGYVPDSTYWLMHNERVIGVVNIRHELNELLRNSGGHIGYGIRPSERKKGYAKLLLKLSLQEIRKLGVQRALVVCDDWNIASRQTILVNGGIQDEDYIEENGAVVQRFWIHTDKIV
>NC_014019.1|WP_013056810.1|2110622_2112047_+|phospholipase-D-family-protein
MIKIAFKGLLIILSLYILYVVIAAVVLFYVPLKTGEETTSIKSGSFFGHSESTDRVRLLEDGYEAGRVRIQMIQEAEKSIDIAYYSIGKGESTDLIMAALFKAADRGVYTRVLLDGIANGLRGNRRGVLYALASHPNIEVKYYEPFQLFKPWAWQNRMHDKIMIVDGQLGIIGGRNIGDKYLANKPPPDFVYDRDVFITNSKHKQDSVIVQMQNYINELWAHPYTKKAFYHLTQYQVDQGKRMKALLLQQYGKAKQVGETFATPKINWNASTVSTKCVSFIHNPIERFNKRPFMWKTLINLAEGANRSVLIQSPYVVPTNAMSKYTAIKKKRDVQWTLLTNSVTSTPNVLAFSGYISMRDTIMKTGVKLYEYQGPYSIHAKSVIYDQRLSAVGSFNLDSRSTFLNNESMVIIDSQKFAKELTMAMENKIDKSILVANHKRWIKSPDVQRKEEPVMKRTFLYALAKVTRFFKEFI
>NC_014019.1|WP_029321458.1|2110183_2110450_-|hypothetical-protein
MEEYSFRFHITDSYPLHNENDKIEAVVRTKIKHADRGCLYEGYLRVHITKVGVFPVAKDIAEAISVRSLRQQLAAELKRYVRPHRNFL
>NC_014019.1|WP_013056809.1|2109581_2110181_+|DUF3298-and-DUF4163-domain-containing-protein
MVTLPATVYSQQMVKKKLNVYYPVVHLTNQAVQHSMNSKILQRTNELIRQQGYGENPDTEETGYYELKTNERNVLSLTLVNFAYSGGAHGLTVVVPLTFNVLTGKTYQLKDLFKKDSNYVSILSKIVGEQIKERDIMVLGEYKGIKPDQDFYIADKSLVLFYQLYDLAPYVYGIPHFPISIYTIQDIIEDESPLGQMFG
>NC_014019.1|WP_013056819.1|2119729_2120695_+|glycosyltransferase-family-2-protein
MSSIVKYSIVVPVYNEEEVIHETYRRLTEVMRSTKEAYELLFVNDGSKDRTAEIIKEYSEQDPAVVLLDFARNFGHQIAITAGMDYARGEAVVVIDADLQDPPELILEMIEKWKQGFDVVYAKRTKRKGETYFKKQTAAMFYRFLRAMTDIDIPLDTGDFRLLDRKVCNQMNSIQEKNRFVRGLVSWVGFKQIAVEYERDERLAGESKYPLKKMLKLSMDGITSFSYKPLKLASYAGVTLSGIGFIYLLVVMYLKLFTDSTITGWSSLIVIQLFFSGIILIILGMIGEYIGRIYDETKNRPLYIVREKYQLETREEVSLRD
>NC_014019.1|WP_013056820.1|2120687_2121092_+|GtrA-family-protein
MTNKWISFIKFALVGVVNTLIDFVVYALLTTIGVNYILAQWISYSVGILNSYVMNRKWTFERKEKSSKREVISFVIVNLITLSLTSFLLTVLYNKWGIPLLISKLLITIASVGINFIGTKLFVFTTKKERGIHI
>NC_014019.1|WP_013056821.1|2121088_2121976_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MTIKKAVIPVGGLGTRFLPATKAQPKEMLPIVDKPAVQYIVEEAVKSGIESIIFITGRNKKSIEDHFDKSIELEQMLEEKHKFDMLKEVQTISSMASIHYIRQKEPLGLGHAILCAEQFIGDEPFAVLLGDDIMTSEEPALKQMIQAYETTNQSVIGVQKVDVEEVSKYGIIQPKNKSGSLHEVSDLIEKPSIEQAPSTIAVMGRYILNPSIFSYLKTIERGVGNELQLTDALRVVCEKERLFALELEGQRFDIGDKIGYMKAMVEVALKRKDLRQTFLSYLEGIVEKERANNFS
>NC_014019.1|WP_013056822.1|2122120_2122795_+|response-regulator-transcription-factor
MIQILVADDDQHIRELISLYLENQGFKIIKAADGEEAWAKMEEFRIDLAVVDIMMPFKDGWELTKEIKEYFDIPVLMVTARGESHDKLKGFDIGTDDYVVKPFDPQEMVARVKALLRRYRVEANNVIYMGNIKLDRTKLEMSAGETSEQLPLKEFELLFTLVSSPGKIFTRDQLIQLIWGYDYEGDERTVDVHIKRLRERLNHMKNVGMEIKTIRGLGYRAEGC
>NC_014019.1|WP_013056823.1|2122796_2124176_+|HAMP-domain-containing-histidine-kinase
MKSIYVKLVLSFIITILLSVVITVVVTTFLSKQKLEMRLGQDMVKMGEDFIDLYGAEDSDKAARFLSNSSFIHFSFIIIDDQHEEKLLGQPGPPIPITPQEVDQVLDGKRYSNLNEEKGDRPQPNVVGLPFKENGRSYALFIQSHPQRQFSVIQDVQNIQLITILLVGIVLFAYVSTIIIKPIKRLSTAMKVVGQGEYNVQVEYATNDEIGLLTKNFNQMTKELNKIETMRQEFIASVSHEIQSPLTSIRGFSAALKDDIVSEDKKIQYLTIIEKESTRLSQLSSNLLKLASLDSEHQTLTLQQYRLDEQIRHVVMALEPQWTKKNIEIDLDLSNVQMEADKDLLEQVWLNLVTNAIKYTPENGLVKISIHQKNEEIDVKIKDNGIGIAEEDQKYIFESFYKVDKSRTLKGSGLGLAITKKIVRLHEGAIRVESKKEQGSIFTVTLPIQKNRTKKDSSV
>NC_014019.1|WP_013056824.1|2124548_2124713_+|YezD-family-protein
MASITQEKLDYIVKLLTEINYGSVLITLHDGQITQVDSTEKNRFLAKSKVASHK
>NC_014019.1|WP_013056825.1|2125055_2125208_+|Fur-regulated-basic-protein-FbpA
MENLLRAAVRQRKQYLIEELLKKGIYKKENHHLFELTLSDLEKEYQARSK
>NC_014019.1|WP_013056826.1|2125459_2126524_+|sulfate-ABC-transporter-substrate-binding-protein
MKKKAVQFLMVLTALLVVLAGCGNGKSTETAGKDSSVSKNDSKKSVELLNVSYDPTRELYQEFNKSFASYWKDKTGQDVTIKQSHGGSGKQGRAVIDGLEADVVTLALAYDIDEIAQTRQLLNKDWEKELAHNSTPYTSTIVFLVRKGNPKGIKDWDDLTKKGTSVITPNPKTSGGARWNYLAAWAYAKNKYNGDNKKIEDFMSKLYGNVEVLDSGARGATTTFVERGIGDVLIAWENEAYLSLNELGKDKFEIVTPSLSILAEPPVAVVDKVAEKKGTTKVAKAYLKYLYTEKGQEIAAENYYRPRNEKVLEKHKDQFPSLNLVTIKDFGGWKKAQETHFNDGGTFDQIYQPK
>NC_014019.1|WP_013056827.1|2126618_2127455_+|sulfate-ABC-transporter-permease-subunit-CysT
MSVLQRQKKKKSILPGFGLSLCFTMFYASILVLFPLAMIFLNTASMGWSDFIKTVTDSRVVASYKLSFGAAFAAGIINVIFGTIIAWVLVRYHFPGKRFIDGLVDLPFALPTAVAGIALTTLYVPKGWIGQLFTFKIAFTPIGIIIALTFIGLPFVVRMVQPVLQNFNAEIEEASASLGASRMQTFRKVIFPELVPAILTGFSLSFARALGEYGSVVFIAGNMPMKTEITPLIIMTKLEQYDYAGATAIASVMLVVSFFLLLLINIIQWWTNRKFVHS
>NC_014019.1|WP_013056828.1|2127467_2128334_+|sulfate-ABC-transporter-permease-subunit-CysW
MAGHVPMQHAKTNVELNHSSLKEPKVVRWLLTFIALAFLALFLVLPLITIFMTAFQKGWETYLTAITNPDALAAIKLTLIVVLITVPLNAVFGVVAAWLITKFDFKGKNLLITLIDLPFAVSPVIAGLVFILLFGAQGLFGEWLFNQDIKIVFAIPGIILATLFVTLPFVAKELIPLMQAQGSAEEEASLTLGASGFKTFFLVTLPNIKWGLLYGIILCNARAIGEFGAVSVVSGHIRGMTNTMPLHIEILYNEYQFAAAFAVASLMSVLAIFTLIVKNIIEWKAKHI

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Crispr_ID: NC_014019_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014019_8

2830823-2830907

Orphan

Consensus_repeat	Method
AGCTTTTGCCGTTTTTGACGTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014019_8

>merge|NC_014019|8|2830823-2830907|CRISPRCasFinder
AGCTTTTGCCATTTTTAACGTACCAAACGAAAACTTTTGCTATTTTTGTCGTACTACTACGTCGTTTTTGACGTTTTTCACGTAC

>NC_014019|8|8|2830823-2830907|CRISPRCasFinder
AGCTTTTGCCATTTTTAACGTAC	CAAACGAAAACTTTTGCTATTTTTGTCGTACTACTACGT
CGTTTTTGACGTTTTTCACGTAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014019.1\|WP_029322439.1\|2833230_2833827_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|366370
NC_014019.1\|WP_013057537.1\|2822523_2823348_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|214615
NC_014019.1\|WP_078081927.1\|2837198_2837486_-\|DUF4183-domain-containing-protein	unknown	unknown	gnl\|CDD\|372730
NC_014019.1\|WP_013057538.1\|2823768_2824428_-\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|177683
NC_014019.1\|WP_013057541.1\|2827692_2828574_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NC_014019.1\|WP_013057553.1\|2839939_2840716_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NC_014019.1\|WP_013057539.1\|2824677_2826180_-\|malate:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|377591
NC_014019.1\|WP_013057548.1\|2835610_2836030_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349995
NC_014019.1\|WP_013057542.1\|2828899_2830363_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057551.1\|2837717_2838950_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|376723
NC_014019.1\|WP_013057549.1\|2836435_2836927_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057534.1\|2820842_2821403_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057552.1\|2839093_2839888_-\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NC_014019.1\|WP_013057533.1\|2819812_2820643_-\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NC_014019.1\|WP_013057544.1\|2831363_2832386_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057535.1\|2821600_2822155_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_014019.1\|WP_013057546.1\|2833829_2834408_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319825
NC_014019.1\|WP_013057547.1\|2834536_2835538_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226728
NC_014019.1\|WP_153254062.1\|2822314_2822458_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057540.1\|2826300_2827125_-\|kinase/pyrophosphorylase	unknown	unknown	gnl\|CDD\|377080

Protein	Function_ID	Function_description	E-value
NC_014019.1\|WP_013057540.1\|2826300_2827125_-\|kinase/pyrophosphorylase	gnl\|CDD\|377080	pfam03618, Kinase-PPPase, Kinase/pyrophosphorylase. This family of regulatory proteins has ADP-dependent kinase and inorganic phosphate-dependent pyrophosphorylase activity.	2.50594e-145
NC_014019.1\|WP_013057537.1\|2822523_2823348_-\|thermonuclease-family-protein	gnl\|CDD\|214615	smart00318, SNc, Staphylococcal nuclease homologues.	3.04492e-38
NC_014019.1\|WP_013057538.1\|2823768_2824428_-\|2OG-Fe(II)-oxygenase	gnl\|CDD\|177683	PLN00052, PLN00052, prolyl 4-hydroxylase; Provisional.	1.55318e-40
NC_014019.1\|WP_013057541.1\|2827692_2828574_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	4.14063e-58
NC_014019.1\|WP_013057539.1\|2824677_2826180_-\|malate:quinone-oxidoreductase	gnl\|CDD\|377591	pfam06039, Mqo, Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.	0
NC_014019.1\|WP_013057553.1\|2839939_2840716_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	2.26716e-72
NC_014019.1\|WP_078081927.1\|2837198_2837486_-\|DUF4183-domain-containing-protein	gnl\|CDD\|372730	pfam13799, DUF4183, Domain of unknown function (DUF4183). This domain of unknown function contains a highly conserved ING motif.	1.29791e-19
NC_014019.1\|WP_029322439.1\|2833230_2833827_+\|mechanosensitive-ion-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.14203e-24
NC_014019.1\|WP_013057552.1\|2839093_2839888_-\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	2.0693e-94
NC_014019.1\|WP_013057533.1\|2819812_2820643_-\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	9.91045e-71
NC_014019.1\|WP_013057535.1\|2821600_2822155_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.90592e-12
NC_014019.1\|WP_013057546.1\|2833829_2834408_-\|HAD-IA-family-hydrolase	gnl\|CDD\|319825	cd07523, HAD_YsbA-like, uncharacterized family of the haloacid dehalogenase-like superfamily, similar to the uncharacterized Lactococcus lactis YsbA. The specific function of Lactococcus lactis YsbA is unknown. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.07034e-42
NC_014019.1\|WP_013057547.1\|2834536_2835538_-\|hypothetical-protein	gnl\|CDD\|226728	COG4278, COG4278, Uncharacterized conserved protein [Function unknown].	8.46054e-08
NC_014019.1\|WP_013057551.1\|2837717_2838950_-\|aminopeptidase	gnl\|CDD\|376723	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29).	0
NC_014019.1\|WP_013057548.1\|2835610_2836030_-\|hypothetical-protein	gnl\|CDD\|349995	cd18551, ABC_6TM_LmrA_like, Six-transmembrane helical domain of the multidrug resistance ABC transporter LmrA and similar proteins. This group represents the six-transmembrane helical domain of the multidrug resistance ABC transporter LmrA from Lactococcus lactis and similar proteins. This transmembrane (TM) subunit possesses the ATP-binding cassette (ABC) exporter fold, which is characterized by 6 TM helices per subunit (domain), or a total of 12 TM helices for the complete transporter. The ABC exporters are found in both prokaryotes and eukaryotes, where they mediate the cellular secretion of toxic compounds, a various type of lipids and polypeptides. ABC transporters typically consist of two transmembrane domains (TMDs) and two nucleotide-binding domains (NBDs). The sequences and structures of the TMDs are quite varied between the different type of transporters, suggesting significant structural diversity of the translocated substrates, while NBDs are conserved among all ABC transporters. The two NBDs together bind and hydrolyze ATP, thereby providing the driving force for transport, while the TMDs participate in substrate recognition and translocation across the lipid membrane by alternating between inward- and outward-facing conformations. Moreover, some ABC genes are organized as half-transporters, which must form either homodimers or heterodimers to form a functional transporter. The ABC exporters play a role in multidrug resistance to antibiotics and anticancer agents, and mutations in these proteins have been shown to cause severe human diseases such as cystic fibrosis.	0.00168085

>NC_014019.1|WP_013057542.1|2828899_2830363_+|hypothetical-protein
MNEPSNFSPYLIKQISDAIDDNIKSKCIDFLYDSHSFFSNEKDFIEDYILNILQDTFVLENKLINPKEIRNPAYKRRQSNKKNWLQTLKKDIKAQKPNPIFEDIELAKKVMDKKVDTEHLKKLFGVEKPEDILKIKLKEVEAWAKSKKTNITDFPYLDSKMNYQIEKAFHTDFTFLIAEIILEKYNGNLSNWIDKRLNSWVEAPIFSNESHSLKTNMEVKTNSQEVVLYNDYKVDEEYFIRTIIPVNDNQTVLSKRNMVLDPKDSQIIQFALSQRDEMFYKEKTVTLDLADIVKEIYNSKGVKNYEAVEARIMKIARYHVEGVAKKKNSRDTKFAINFFQKAVIETDEVTGRRYATIVFSDDTHQGFLNQQFVQIYSDVIKKFKDNSLSSLLLYAFQKERLDCYLQEKSYTHFYPYQYFASKVRFRSKKIDVNLKLINESLAEFVSNQVLIQSYQQKLQGFEISFIPLQNYEIQDYFGGEHRETLEG
>NC_014019.1|WP_013057541.1|2827692_2828574_-|Cof-type-HAD-IIB-family-hydrolase
MLLKPKAIFLDMDGTILNRSNKVSIQTKEIIDELRKQGIFVFIATGRAFDEIEELVPEGFQVDGFITSNGMAGYVGKESVFQHSLSLQLVETIIEKARANKVYYELFPYGTPRVTLKQDQSYVENEIREPKPDSVEINEWLSRKQAIKEEIDWKDSVEGSEFSKFYFFARTHEHIDKWKEELEELKKEIDFTTSTSSKHNVEVMVANVNKATGIQQMLKHFNLPEQDILAIGDSNNDLPMFQFASYAVAMKNAPDHIKEIVDDVTEFNCDENGVSHYLSKFLLQKSARINPVL
>NC_014019.1|WP_013057540.1|2826300_2827125_-|kinase/pyrophosphorylase
MNKRKIVYIVSDSVGETAELMVKAVLTQFSGEDIEIQNTSYVEDEGNIDNIIAEARCNQAIIAYTIVIPPLKQYLDQKAQEEGIVAIDLMTPLMSAFSQTFNKKPNLQPRLTRKLDDNYFRRVEAVEFAVKYDDGQDFRGIKRADLVLIGVSRTSKTPLSMYLAHKSLKVANIPLVPEVTPPDELFTIPKNKCIGLVITPDKLNEIRKERLKNLGLASQANYANVDRILEELDYAEKIMKRIGCPIVNVSGKAVEETAEVILSMLKKDKMKGYV
>NC_014019.1|WP_013057539.1|2824677_2826180_-|malate:quinone-oxidoreductase
MSNVYKKTDVILIGAGVMSATLGSLLKELAPEWEIKVFEKLADAGEESSNEWNNAGTGHAALCELNYTSEQADGSIDITKAVRINEQFQLSRQFWSYLVSSNLIHHPQEFIMPIPHISFVQGEKNVSFLKKRFEALSNNPLFQGMEYSDRPEKLKEWMPLVMKGRTSTEAIAATKIDSGTDVNFGALTRMLFTHLKSKSVEINYNHSVENLTRTADGSWEVKVHDIHSGKQEYHTANFVFIGGGGGSLSLLQKTGIPESKHIGGFPVSGLFMVCNNPEVVAQHHGKVYGKAKVGAPPMSVPHLDTRYIDRKKTLLFGPFAGFSPKFLKTGSNLDLINSVKPNNILTMLAAGVKEMGLTKYLIQQVLLSNEKRMEELREFIPNAKSEDWDIVVAGQRVQVIKDTEAGGKGTLQFGTEVVSSADGSVAALLGASPGASTAVHVMLEVLEKCFPQHIEEWESKIKEMIPSYGLSLVENPALFNEIHASTAQMLDLSKKELVYR
>NC_014019.1|WP_013057538.1|2823768_2824428_-|2OG-Fe(II)-oxygenase
MILTNTSLLTKEQTIFNHTGNKIKLEDREIDIVARFEEPLVLVLGNVLSNEECDELIQLSKDKMQRSKIGAAREVNSIRTSSGMFFEESENELVHQIERRLSKIMGPSIEYAEGLQVLKYLPDQEYKAHHDYFTSASKASKNNRISTLVMYLNDVEEGGETYFPKLGLSVSPTKGMAVYFEYFYSDAELNDRTLHGGAPVIKGEKWVATQWMRKQKIRS
>NC_014019.1|WP_013057537.1|2822523_2823348_-|thermonuclease-family-protein
MKEIKAIICTMLAMFMLLLTGCSDEQASHSTTSSTDTKQAVQVEGSSDQENDHSPSKANREDVVGEAATVERVVDGDTLKVKMLNGKRDRVRLLLVDTPETKHPKLGVQPFGPEASAYTKKRLEGQEITLEFDVQERDQYGRLLAYVWIDNELYNEELLAKGLARVAVFPPNTKYVDEFKKIQEQARKSEKGIWSIENYAQEKGYNTDAVKNQSSSNQKDIQSAKSCEGKIKGNQNSKIYHVPTGAHYNQTMNNVIWFCTEKDAQEAGYKKAKN
>NC_014019.1|WP_153254062.1|2822314_2822458_+|hypothetical-protein
MKKRRQQKDTTVSGWEVLAEILLQVPQLLIWPLRLLIRIGRSLLDGI
>NC_014019.1|WP_013057535.1|2821600_2822155_-|GNAT-family-N-acetyltransferase
MKIRKARKEDASAVTELLYDMLGSIARSHTAATTNEEALLRLKAFILSEKNRYSYHHITVAEVDEKVVGLMLCYEGSMLQTLYEPVKRFVRAKLNNPAWEIDIETEHGDYYIDSLCVDEAYRGKGIGTALLNVAKQEAKKRKMFLSLNVEYNNVEAKKLYQRIGFQEHKTIFIDKKPFFYMKTA
>NC_014019.1|WP_013057534.1|2820842_2821403_-|hypothetical-protein
MNIRDLPFNMSYRFNEQLREVPINPHQMKQGIIYLKKRALEEEDECAAAKTYGHIGVYERILGELTSSERHLLLAIYLYDRHADTIGEFLNTIRLGHTYHWQEQWDKANETFQLLIEQLKADEDLHIYEDFVYQYYGKCLLDQRVVSRAHHYFQRALEIRLKKGDKELIESTNSCIRLCLNKLKHS
>NC_014019.1|WP_013057533.1|2819812_2820643_-|YitT-family-protein
MSKTVKDVIFLLIGSFVFSLAVNMFVIPIGLGEGGVTGISIILYYTTHLSTGITNFILNGILLIVGYKFLEKKTIVYTMITIIATSIFLHVTEGWGLHLNEELIGMVFAGVLLGVGIGMILRVGGTTAGSAIIARILNKFLNWKVSHALLIVDLLVVLASYFIIGIEKLLFTIVMLYITTKVIDFVIEGFDAKKAVTVISSNKNEVADQINEQLDRGVTILNGRGNYTKESKEILYVVINKQELIKLKKLIKKIDDEAFVIVHDVRDVIGKGFLSA
>NC_014019.1|WP_013057544.1|2831363_2832386_+|hypothetical-protein
MIKKEFAKIGKQIIRQLSSTVEKYKDIEDHMDLDAHGNPTIKTVAEHHRLSKSQISQLIFYHFLHVDERGIICDVSEKEIAAALNCTVRTVRNNNVVLAETELISYSRSGKGINICIVPYPQYFEEHGFGFMELEYTRFEELILIENVNALRLELRKELVYDNDTIKRQFNPGENTSKISFNDYKIFTPKYTHYKGMMQKIAETQTSAFKTVVQGSTIFFVLKDGAKNGKMSKQEKKDQYDAAIRRTIEETFVKLSGHSTDSTGIVMSSFQNEDIADLVQLSFEYGIERVKSALYSLIEQAFFSHDAQVVENYGGKIRTLIRKELSKNLQDQVPAELTAS
>NC_014019.1|WP_029322439.1|2833230_2833827_+|mechanosensitive-ion-channel
MKDIHWVQQTLFNTGKWIDISEVIIKIILIFIIAQIVIRFARSVINKIFDFRFKTKLLRYNERKEITLKKLCLSIVMYVVYFIVLITSLEAIGINMKALLAGISVAGFITGLGAQNLIKDILNGFFILFEDQFSVGDHVSINDTKGTVEEIGLRTTKIRGVDGEFYFFANSNITKVANYTLGEIPEVHKPEQIKTREE
>NC_014019.1|WP_013057546.1|2833829_2834408_-|HAD-IA-family-hydrolase
MNILWDFDGTIFDTYPTIVKAFKELLTDQTISEGDILKQMKISSDVAIKHFDIEKSLFDKHFHVLEQKINPKDKPAFPHVEDVLSFADTNVIVTHKSRQSTLDILAFFNMEHYFTEIITKDDGYKRKPDSGAYAYLHDKYQLDLVIGDRELDLKPARELGIKTCAFQNDDIEADYHLTSYDQFFTTVVNKNS
>NC_014019.1|WP_013057547.1|2834536_2835538_-|hypothetical-protein
MIAAIIVGAVILLALIIKGIGKPRGFRLYKEELPDELGIHKGNGFEDIVHSLEDSLPKAYVQQVKQRMKGRNTKADEVEWTFFEMKRYFLLNAVIKDVPMFSAKADEVWHEMIMFTVDYERFTDRFFDRFLHHQPNVDTTPSPQPDKRAFFDWMYAHLFDITGNSRLLWGKFFQHPLDKSTLQDFQRLSEDELLDRYFLRNGKWEEQQRHLIQALKEEIKDAKKRMKSGGSSYFKKALKKGNVSNELLFQGFVFYSLYEATDFSRHMNELLLYKKTIYAGDTASYSGYSCSSPWEDNRHHHHHDGGHHHHDSGSSCSSSNCSSSSCGSGCSSS
>NC_014019.1|WP_013057548.1|2835610_2836030_-|hypothetical-protein
MSLSAKKILLLVLVVICLVLVVMQFINRSAEPTSEQAQETLSKLPEQETVKEKAKGDEEAHKYRVYYITIEKIENGTYSGTTKEGTGIKFSDKNLNEPIPSNLKKGDIVKAYFDLEYSTKGLVKVEKVDEMPDDDESSS
>NC_014019.1|WP_013057549.1|2836435_2836927_+|hypothetical-protein
MMFALIVVVGVVALGVASFYVIKRPQGAVDPEDRKPLVSVNGHVKFAEGINQISISKIDMYDQRLVINQVAIIPFNRIQRAEFSKVVKNEKGLHGAPVQRYFGELTIHFTDKNGQETYIRCETPKKNQFHLIYQYDLMKRQLNKRLGLEDLQPYLTLQEPYEL
>NC_014019.1|WP_078081927.1|2837198_2837486_-|DUF4183-domain-containing-protein
MQQEFRYIFPKKVRIFEYYTVAGGSKRIFTDQNALKEYGTQHILDPESYSYSNLFINGVLQPSSNYSVQKGLLIINTEDIPLEKSPVILQMIKVI
>NC_014019.1|WP_013057551.1|2837717_2838950_-|aminopeptidase
MEQFERNIEKYAELAVKVGVNIQKGQVLNINADISSADFVREIAKKAYEAGAKSVDVDWHDDHLVRLKYEKADESVFNEFPAWKAQAREELVKNGGAVLSVISSGPDLLKGVDGKRIAAFQKVSGKAMKKFREAIQSDKISWSIVAVPSKDWAAKVFPDVPEEQQQEKLWEAIFKSVRVDQEEPVAAWEEHNASLHTKVDILNEKRFAKLHYKAPGTDLTIELPDKHIWVGAGSVNEDGNSFMANMPTEEVFTLPKKDGVNGQVTSTKPLSYAGNLIENFTLTFENGKIVDVNAEEGEETLKHLIETDEGAKYLGEVALVPHQSPISQSNIIFYNTLFDENASNHLAIGSSYSFCLEGGKTMSKEELSQNGANDSITHVDFMIGSAEMDIDGIKADGTSEPVFRKGNWAF
>NC_014019.1|WP_013057552.1|2839093_2839888_-|IclR-family-transcriptional-regulator
MERENMVKSVSRALDIVTIVSMEREGVGVTEIAKQMDINKSSVYRILTTLAQYGYIEQDQETGRYKLGYKFLEVSSKLLDSIDLRTEAKPFLQELESETNEVIHLVVYDQGEVVYIEKLEGNQTLRMHSKVGKRAPMHCTSVGKAILAFLPLNTVTSILERKGLPAHTDHTITDEESFLRELSEVKQKGYALDLEENEYGITCIAAPIFDHLGQVVAAVSISGATMRMTNERLTYLQERMVDIGKNISERLGYKTESVKDKSLF
>NC_014019.1|WP_013057553.1|2839939_2840716_-|fumarylacetoacetate-hydrolase-family-protein
MKFVRFAVQDSRHTGVLKEDTISVIKGNIFEKWDYTGQTFSLSEVRLLAPLEPIQIIGIGANYAAAKSELPRELPSIPVFFFKPVSSVIGPNEDIVIPTAIKHVKFESELAVIIGKEAKNIAKEDVLDYIFGYTIGNDVTAPDYFHEDGHWTIGKSFDSFTPLGPVIETELDFKSIHVKAFLNGVEKQNSSTDLMIISVEQMIAYLSTVMTLKPGDVVLTGSPVGAELVSANDVIECTIREIGTLQNPFVAEKERVNV

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Crispr_ID: NC_014019_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014019_7

2830668-2830753

Orphan

Consensus_repeat	Method
AGCTTTTGCCGTTTTTGACGTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014019_7

>merge|NC_014019|7|2830668-2830753|CRISPRCasFinder
ACCTTTTGCCGTTTTTGACGTACTCTTTCATTACTTTTGCCGTTTTTGACGTACTCCTTCATTACTTTTGCCGTTTTCTGCGTACT

>NC_014019|7|7|2830668-2830753|CRISPRCasFinder
ACCTTTTGCCGTTTTTGACGTAC	TCTTTCATTACTTTTGCCGTTTTTGACGTACTCCTTCAT
TACTTTTGCCGTTTTCTGCGTACT

Protein	Signature genes	Signature genes Name	Protein_function
NC_014019.1\|WP_029322439.1\|2833230_2833827_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|366370
NC_014019.1\|WP_013057537.1\|2822523_2823348_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|214615
NC_014019.1\|WP_078081927.1\|2837198_2837486_-\|DUF4183-domain-containing-protein	unknown	unknown	gnl\|CDD\|372730
NC_014019.1\|WP_013057538.1\|2823768_2824428_-\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|177683
NC_014019.1\|WP_013057541.1\|2827692_2828574_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NC_014019.1\|WP_013057553.1\|2839939_2840716_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NC_014019.1\|WP_013057539.1\|2824677_2826180_-\|malate:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|377591
NC_014019.1\|WP_013057548.1\|2835610_2836030_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349995
NC_014019.1\|WP_013057542.1\|2828899_2830363_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057551.1\|2837717_2838950_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|376723
NC_014019.1\|WP_013057549.1\|2836435_2836927_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057534.1\|2820842_2821403_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057552.1\|2839093_2839888_-\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NC_014019.1\|WP_013057533.1\|2819812_2820643_-\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NC_014019.1\|WP_013057544.1\|2831363_2832386_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057535.1\|2821600_2822155_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_014019.1\|WP_013057546.1\|2833829_2834408_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319825
NC_014019.1\|WP_013057547.1\|2834536_2835538_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226728
NC_014019.1\|WP_153254062.1\|2822314_2822458_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057540.1\|2826300_2827125_-\|kinase/pyrophosphorylase	unknown	unknown	gnl\|CDD\|377080

Protein	Function_ID	Function_description	E-value
NC_014019.1\|WP_013057540.1\|2826300_2827125_-\|kinase/pyrophosphorylase	gnl\|CDD\|377080	pfam03618, Kinase-PPPase, Kinase/pyrophosphorylase. This family of regulatory proteins has ADP-dependent kinase and inorganic phosphate-dependent pyrophosphorylase activity.	2.50594e-145
NC_014019.1\|WP_013057537.1\|2822523_2823348_-\|thermonuclease-family-protein	gnl\|CDD\|214615	smart00318, SNc, Staphylococcal nuclease homologues.	3.04492e-38
NC_014019.1\|WP_013057538.1\|2823768_2824428_-\|2OG-Fe(II)-oxygenase	gnl\|CDD\|177683	PLN00052, PLN00052, prolyl 4-hydroxylase; Provisional.	1.55318e-40
NC_014019.1\|WP_013057541.1\|2827692_2828574_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	4.14063e-58
NC_014019.1\|WP_013057539.1\|2824677_2826180_-\|malate:quinone-oxidoreductase	gnl\|CDD\|377591	pfam06039, Mqo, Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.	0
NC_014019.1\|WP_013057553.1\|2839939_2840716_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	2.26716e-72
NC_014019.1\|WP_078081927.1\|2837198_2837486_-\|DUF4183-domain-containing-protein	gnl\|CDD\|372730	pfam13799, DUF4183, Domain of unknown function (DUF4183). This domain of unknown function contains a highly conserved ING motif.	1.29791e-19
NC_014019.1\|WP_029322439.1\|2833230_2833827_+\|mechanosensitive-ion-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.14203e-24
NC_014019.1\|WP_013057552.1\|2839093_2839888_-\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	2.0693e-94
NC_014019.1\|WP_013057533.1\|2819812_2820643_-\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	9.91045e-71
NC_014019.1\|WP_013057535.1\|2821600_2822155_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.90592e-12
NC_014019.1\|WP_013057546.1\|2833829_2834408_-\|HAD-IA-family-hydrolase	gnl\|CDD\|319825	cd07523, HAD_YsbA-like, uncharacterized family of the haloacid dehalogenase-like superfamily, similar to the uncharacterized Lactococcus lactis YsbA. The specific function of Lactococcus lactis YsbA is unknown. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.07034e-42
NC_014019.1\|WP_013057547.1\|2834536_2835538_-\|hypothetical-protein	gnl\|CDD\|226728	COG4278, COG4278, Uncharacterized conserved protein [Function unknown].	8.46054e-08
NC_014019.1\|WP_013057551.1\|2837717_2838950_-\|aminopeptidase	gnl\|CDD\|376723	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29).	0
NC_014019.1\|WP_013057548.1\|2835610_2836030_-\|hypothetical-protein	gnl\|CDD\|349995	cd18551, ABC_6TM_LmrA_like, Six-transmembrane helical domain of the multidrug resistance ABC transporter LmrA and similar proteins. This group represents the six-transmembrane helical domain of the multidrug resistance ABC transporter LmrA from Lactococcus lactis and similar proteins. This transmembrane (TM) subunit possesses the ATP-binding cassette (ABC) exporter fold, which is characterized by 6 TM helices per subunit (domain), or a total of 12 TM helices for the complete transporter. The ABC exporters are found in both prokaryotes and eukaryotes, where they mediate the cellular secretion of toxic compounds, a various type of lipids and polypeptides. ABC transporters typically consist of two transmembrane domains (TMDs) and two nucleotide-binding domains (NBDs). The sequences and structures of the TMDs are quite varied between the different type of transporters, suggesting significant structural diversity of the translocated substrates, while NBDs are conserved among all ABC transporters. The two NBDs together bind and hydrolyze ATP, thereby providing the driving force for transport, while the TMDs participate in substrate recognition and translocation across the lipid membrane by alternating between inward- and outward-facing conformations. Moreover, some ABC genes are organized as half-transporters, which must form either homodimers or heterodimers to form a functional transporter. The ABC exporters play a role in multidrug resistance to antibiotics and anticancer agents, and mutations in these proteins have been shown to cause severe human diseases such as cystic fibrosis.	0.00168085

>NC_014019.1|WP_013057542.1|2828899_2830363_+|hypothetical-protein
MNEPSNFSPYLIKQISDAIDDNIKSKCIDFLYDSHSFFSNEKDFIEDYILNILQDTFVLENKLINPKEIRNPAYKRRQSNKKNWLQTLKKDIKAQKPNPIFEDIELAKKVMDKKVDTEHLKKLFGVEKPEDILKIKLKEVEAWAKSKKTNITDFPYLDSKMNYQIEKAFHTDFTFLIAEIILEKYNGNLSNWIDKRLNSWVEAPIFSNESHSLKTNMEVKTNSQEVVLYNDYKVDEEYFIRTIIPVNDNQTVLSKRNMVLDPKDSQIIQFALSQRDEMFYKEKTVTLDLADIVKEIYNSKGVKNYEAVEARIMKIARYHVEGVAKKKNSRDTKFAINFFQKAVIETDEVTGRRYATIVFSDDTHQGFLNQQFVQIYSDVIKKFKDNSLSSLLLYAFQKERLDCYLQEKSYTHFYPYQYFASKVRFRSKKIDVNLKLINESLAEFVSNQVLIQSYQQKLQGFEISFIPLQNYEIQDYFGGEHRETLEG
>NC_014019.1|WP_013057541.1|2827692_2828574_-|Cof-type-HAD-IIB-family-hydrolase
MLLKPKAIFLDMDGTILNRSNKVSIQTKEIIDELRKQGIFVFIATGRAFDEIEELVPEGFQVDGFITSNGMAGYVGKESVFQHSLSLQLVETIIEKARANKVYYELFPYGTPRVTLKQDQSYVENEIREPKPDSVEINEWLSRKQAIKEEIDWKDSVEGSEFSKFYFFARTHEHIDKWKEELEELKKEIDFTTSTSSKHNVEVMVANVNKATGIQQMLKHFNLPEQDILAIGDSNNDLPMFQFASYAVAMKNAPDHIKEIVDDVTEFNCDENGVSHYLSKFLLQKSARINPVL
>NC_014019.1|WP_013057540.1|2826300_2827125_-|kinase/pyrophosphorylase
MNKRKIVYIVSDSVGETAELMVKAVLTQFSGEDIEIQNTSYVEDEGNIDNIIAEARCNQAIIAYTIVIPPLKQYLDQKAQEEGIVAIDLMTPLMSAFSQTFNKKPNLQPRLTRKLDDNYFRRVEAVEFAVKYDDGQDFRGIKRADLVLIGVSRTSKTPLSMYLAHKSLKVANIPLVPEVTPPDELFTIPKNKCIGLVITPDKLNEIRKERLKNLGLASQANYANVDRILEELDYAEKIMKRIGCPIVNVSGKAVEETAEVILSMLKKDKMKGYV
>NC_014019.1|WP_013057539.1|2824677_2826180_-|malate:quinone-oxidoreductase
MSNVYKKTDVILIGAGVMSATLGSLLKELAPEWEIKVFEKLADAGEESSNEWNNAGTGHAALCELNYTSEQADGSIDITKAVRINEQFQLSRQFWSYLVSSNLIHHPQEFIMPIPHISFVQGEKNVSFLKKRFEALSNNPLFQGMEYSDRPEKLKEWMPLVMKGRTSTEAIAATKIDSGTDVNFGALTRMLFTHLKSKSVEINYNHSVENLTRTADGSWEVKVHDIHSGKQEYHTANFVFIGGGGGSLSLLQKTGIPESKHIGGFPVSGLFMVCNNPEVVAQHHGKVYGKAKVGAPPMSVPHLDTRYIDRKKTLLFGPFAGFSPKFLKTGSNLDLINSVKPNNILTMLAAGVKEMGLTKYLIQQVLLSNEKRMEELREFIPNAKSEDWDIVVAGQRVQVIKDTEAGGKGTLQFGTEVVSSADGSVAALLGASPGASTAVHVMLEVLEKCFPQHIEEWESKIKEMIPSYGLSLVENPALFNEIHASTAQMLDLSKKELVYR
>NC_014019.1|WP_013057538.1|2823768_2824428_-|2OG-Fe(II)-oxygenase
MILTNTSLLTKEQTIFNHTGNKIKLEDREIDIVARFEEPLVLVLGNVLSNEECDELIQLSKDKMQRSKIGAAREVNSIRTSSGMFFEESENELVHQIERRLSKIMGPSIEYAEGLQVLKYLPDQEYKAHHDYFTSASKASKNNRISTLVMYLNDVEEGGETYFPKLGLSVSPTKGMAVYFEYFYSDAELNDRTLHGGAPVIKGEKWVATQWMRKQKIRS
>NC_014019.1|WP_013057537.1|2822523_2823348_-|thermonuclease-family-protein
MKEIKAIICTMLAMFMLLLTGCSDEQASHSTTSSTDTKQAVQVEGSSDQENDHSPSKANREDVVGEAATVERVVDGDTLKVKMLNGKRDRVRLLLVDTPETKHPKLGVQPFGPEASAYTKKRLEGQEITLEFDVQERDQYGRLLAYVWIDNELYNEELLAKGLARVAVFPPNTKYVDEFKKIQEQARKSEKGIWSIENYAQEKGYNTDAVKNQSSSNQKDIQSAKSCEGKIKGNQNSKIYHVPTGAHYNQTMNNVIWFCTEKDAQEAGYKKAKN
>NC_014019.1|WP_153254062.1|2822314_2822458_+|hypothetical-protein
MKKRRQQKDTTVSGWEVLAEILLQVPQLLIWPLRLLIRIGRSLLDGI
>NC_014019.1|WP_013057535.1|2821600_2822155_-|GNAT-family-N-acetyltransferase
MKIRKARKEDASAVTELLYDMLGSIARSHTAATTNEEALLRLKAFILSEKNRYSYHHITVAEVDEKVVGLMLCYEGSMLQTLYEPVKRFVRAKLNNPAWEIDIETEHGDYYIDSLCVDEAYRGKGIGTALLNVAKQEAKKRKMFLSLNVEYNNVEAKKLYQRIGFQEHKTIFIDKKPFFYMKTA
>NC_014019.1|WP_013057534.1|2820842_2821403_-|hypothetical-protein
MNIRDLPFNMSYRFNEQLREVPINPHQMKQGIIYLKKRALEEEDECAAAKTYGHIGVYERILGELTSSERHLLLAIYLYDRHADTIGEFLNTIRLGHTYHWQEQWDKANETFQLLIEQLKADEDLHIYEDFVYQYYGKCLLDQRVVSRAHHYFQRALEIRLKKGDKELIESTNSCIRLCLNKLKHS
>NC_014019.1|WP_013057533.1|2819812_2820643_-|YitT-family-protein
MSKTVKDVIFLLIGSFVFSLAVNMFVIPIGLGEGGVTGISIILYYTTHLSTGITNFILNGILLIVGYKFLEKKTIVYTMITIIATSIFLHVTEGWGLHLNEELIGMVFAGVLLGVGIGMILRVGGTTAGSAIIARILNKFLNWKVSHALLIVDLLVVLASYFIIGIEKLLFTIVMLYITTKVIDFVIEGFDAKKAVTVISSNKNEVADQINEQLDRGVTILNGRGNYTKESKEILYVVINKQELIKLKKLIKKIDDEAFVIVHDVRDVIGKGFLSA
>NC_014019.1|WP_013057544.1|2831363_2832386_+|hypothetical-protein
MIKKEFAKIGKQIIRQLSSTVEKYKDIEDHMDLDAHGNPTIKTVAEHHRLSKSQISQLIFYHFLHVDERGIICDVSEKEIAAALNCTVRTVRNNNVVLAETELISYSRSGKGINICIVPYPQYFEEHGFGFMELEYTRFEELILIENVNALRLELRKELVYDNDTIKRQFNPGENTSKISFNDYKIFTPKYTHYKGMMQKIAETQTSAFKTVVQGSTIFFVLKDGAKNGKMSKQEKKDQYDAAIRRTIEETFVKLSGHSTDSTGIVMSSFQNEDIADLVQLSFEYGIERVKSALYSLIEQAFFSHDAQVVENYGGKIRTLIRKELSKNLQDQVPAELTAS
>NC_014019.1|WP_029322439.1|2833230_2833827_+|mechanosensitive-ion-channel
MKDIHWVQQTLFNTGKWIDISEVIIKIILIFIIAQIVIRFARSVINKIFDFRFKTKLLRYNERKEITLKKLCLSIVMYVVYFIVLITSLEAIGINMKALLAGISVAGFITGLGAQNLIKDILNGFFILFEDQFSVGDHVSINDTKGTVEEIGLRTTKIRGVDGEFYFFANSNITKVANYTLGEIPEVHKPEQIKTREE
>NC_014019.1|WP_013057546.1|2833829_2834408_-|HAD-IA-family-hydrolase
MNILWDFDGTIFDTYPTIVKAFKELLTDQTISEGDILKQMKISSDVAIKHFDIEKSLFDKHFHVLEQKINPKDKPAFPHVEDVLSFADTNVIVTHKSRQSTLDILAFFNMEHYFTEIITKDDGYKRKPDSGAYAYLHDKYQLDLVIGDRELDLKPARELGIKTCAFQNDDIEADYHLTSYDQFFTTVVNKNS
>NC_014019.1|WP_013057547.1|2834536_2835538_-|hypothetical-protein
MIAAIIVGAVILLALIIKGIGKPRGFRLYKEELPDELGIHKGNGFEDIVHSLEDSLPKAYVQQVKQRMKGRNTKADEVEWTFFEMKRYFLLNAVIKDVPMFSAKADEVWHEMIMFTVDYERFTDRFFDRFLHHQPNVDTTPSPQPDKRAFFDWMYAHLFDITGNSRLLWGKFFQHPLDKSTLQDFQRLSEDELLDRYFLRNGKWEEQQRHLIQALKEEIKDAKKRMKSGGSSYFKKALKKGNVSNELLFQGFVFYSLYEATDFSRHMNELLLYKKTIYAGDTASYSGYSCSSPWEDNRHHHHHDGGHHHHDSGSSCSSSNCSSSSCGSGCSSS
>NC_014019.1|WP_013057548.1|2835610_2836030_-|hypothetical-protein
MSLSAKKILLLVLVVICLVLVVMQFINRSAEPTSEQAQETLSKLPEQETVKEKAKGDEEAHKYRVYYITIEKIENGTYSGTTKEGTGIKFSDKNLNEPIPSNLKKGDIVKAYFDLEYSTKGLVKVEKVDEMPDDDESSS
>NC_014019.1|WP_013057549.1|2836435_2836927_+|hypothetical-protein
MMFALIVVVGVVALGVASFYVIKRPQGAVDPEDRKPLVSVNGHVKFAEGINQISISKIDMYDQRLVINQVAIIPFNRIQRAEFSKVVKNEKGLHGAPVQRYFGELTIHFTDKNGQETYIRCETPKKNQFHLIYQYDLMKRQLNKRLGLEDLQPYLTLQEPYEL
>NC_014019.1|WP_078081927.1|2837198_2837486_-|DUF4183-domain-containing-protein
MQQEFRYIFPKKVRIFEYYTVAGGSKRIFTDQNALKEYGTQHILDPESYSYSNLFINGVLQPSSNYSVQKGLLIINTEDIPLEKSPVILQMIKVI
>NC_014019.1|WP_013057551.1|2837717_2838950_-|aminopeptidase
MEQFERNIEKYAELAVKVGVNIQKGQVLNINADISSADFVREIAKKAYEAGAKSVDVDWHDDHLVRLKYEKADESVFNEFPAWKAQAREELVKNGGAVLSVISSGPDLLKGVDGKRIAAFQKVSGKAMKKFREAIQSDKISWSIVAVPSKDWAAKVFPDVPEEQQQEKLWEAIFKSVRVDQEEPVAAWEEHNASLHTKVDILNEKRFAKLHYKAPGTDLTIELPDKHIWVGAGSVNEDGNSFMANMPTEEVFTLPKKDGVNGQVTSTKPLSYAGNLIENFTLTFENGKIVDVNAEEGEETLKHLIETDEGAKYLGEVALVPHQSPISQSNIIFYNTLFDENASNHLAIGSSYSFCLEGGKTMSKEELSQNGANDSITHVDFMIGSAEMDIDGIKADGTSEPVFRKGNWAF
>NC_014019.1|WP_013057552.1|2839093_2839888_-|IclR-family-transcriptional-regulator
MERENMVKSVSRALDIVTIVSMEREGVGVTEIAKQMDINKSSVYRILTTLAQYGYIEQDQETGRYKLGYKFLEVSSKLLDSIDLRTEAKPFLQELESETNEVIHLVVYDQGEVVYIEKLEGNQTLRMHSKVGKRAPMHCTSVGKAILAFLPLNTVTSILERKGLPAHTDHTITDEESFLRELSEVKQKGYALDLEENEYGITCIAAPIFDHLGQVVAAVSISGATMRMTNERLTYLQERMVDIGKNISERLGYKTESVKDKSLF
>NC_014019.1|WP_013057553.1|2839939_2840716_-|fumarylacetoacetate-hydrolase-family-protein
MKFVRFAVQDSRHTGVLKEDTISVIKGNIFEKWDYTGQTFSLSEVRLLAPLEPIQIIGIGANYAAAKSELPRELPSIPVFFFKPVSSVIGPNEDIVIPTAIKHVKFESELAVIIGKEAKNIAKEDVLDYIFGYTIGNDVTAPDYFHEDGHWTIGKSFDSFTPLGPVIETELDFKSIHVKAFLNGVEKQNSSTDLMIISVEQMIAYLSTVMTLKPGDVVLTGSPVGAELVSANDVIECTIREIGTLQNPFVAEKERVNV

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Crispr_ID: NC_014019_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014019_6

2830451-2830598

Orphan

Consensus_repeat	Method
AGCTTTTGCCGTTTTTGACGTAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_014019_6

>merge|NC_014019|6|2830451-2830598|CRISPRCasFinder
AAGTTTTGTCATTTTTAACGTACTAACCAGAAGCTTTTGCCGTTTTTGACGTACCTTTTCGCTTCTTTTGCCGTTTTTAGCGTACTAATTACTACCTTTTGCCGTTTTTGACGTACTCCTTCATTACTTTTGCCATTTTTGACGTACT

>NC_014019|6|6|2830451-2830598|CRISPRCasFinder
AAGTTTTGTCATTTTTAACGTAC	TAACCAGAAGCTTTTGCCGTTTTTGACGTACCTTTTCGC
TTCTTTTGCCGTTTTTAGCGTAC	TAATTACTACCTTTTGCCGTTTTTGACGTACTCCTTCAT
TACTTTTGCCATTTTTGACGTACT

Protein	Signature genes	Signature genes Name	Protein_function
NC_014019.1\|WP_029322439.1\|2833230_2833827_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|366370
NC_014019.1\|WP_013057537.1\|2822523_2823348_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|214615
NC_014019.1\|WP_078081927.1\|2837198_2837486_-\|DUF4183-domain-containing-protein	unknown	unknown	gnl\|CDD\|372730
NC_014019.1\|WP_013057538.1\|2823768_2824428_-\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|177683
NC_014019.1\|WP_013057541.1\|2827692_2828574_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NC_014019.1\|WP_013057553.1\|2839939_2840716_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NC_014019.1\|WP_013057539.1\|2824677_2826180_-\|malate:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|377591
NC_014019.1\|WP_013057548.1\|2835610_2836030_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349995
NC_014019.1\|WP_013057542.1\|2828899_2830363_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057551.1\|2837717_2838950_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|376723
NC_014019.1\|WP_013057549.1\|2836435_2836927_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057534.1\|2820842_2821403_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057552.1\|2839093_2839888_-\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NC_014019.1\|WP_013057533.1\|2819812_2820643_-\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NC_014019.1\|WP_013057544.1\|2831363_2832386_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057535.1\|2821600_2822155_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_014019.1\|WP_013057546.1\|2833829_2834408_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319825
NC_014019.1\|WP_013057547.1\|2834536_2835538_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226728
NC_014019.1\|WP_153254062.1\|2822314_2822458_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013057540.1\|2826300_2827125_-\|kinase/pyrophosphorylase	unknown	unknown	gnl\|CDD\|377080

Protein	Function_ID	Function_description	E-value
NC_014019.1\|WP_013057540.1\|2826300_2827125_-\|kinase/pyrophosphorylase	gnl\|CDD\|377080	pfam03618, Kinase-PPPase, Kinase/pyrophosphorylase. This family of regulatory proteins has ADP-dependent kinase and inorganic phosphate-dependent pyrophosphorylase activity.	2.50594e-145
NC_014019.1\|WP_013057537.1\|2822523_2823348_-\|thermonuclease-family-protein	gnl\|CDD\|214615	smart00318, SNc, Staphylococcal nuclease homologues.	3.04492e-38
NC_014019.1\|WP_013057538.1\|2823768_2824428_-\|2OG-Fe(II)-oxygenase	gnl\|CDD\|177683	PLN00052, PLN00052, prolyl 4-hydroxylase; Provisional.	1.55318e-40
NC_014019.1\|WP_013057541.1\|2827692_2828574_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	4.14063e-58
NC_014019.1\|WP_013057539.1\|2824677_2826180_-\|malate:quinone-oxidoreductase	gnl\|CDD\|377591	pfam06039, Mqo, Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.	0
NC_014019.1\|WP_013057553.1\|2839939_2840716_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	2.26716e-72
NC_014019.1\|WP_078081927.1\|2837198_2837486_-\|DUF4183-domain-containing-protein	gnl\|CDD\|372730	pfam13799, DUF4183, Domain of unknown function (DUF4183). This domain of unknown function contains a highly conserved ING motif.	1.29791e-19
NC_014019.1\|WP_029322439.1\|2833230_2833827_+\|mechanosensitive-ion-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.14203e-24
NC_014019.1\|WP_013057552.1\|2839093_2839888_-\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	2.0693e-94
NC_014019.1\|WP_013057533.1\|2819812_2820643_-\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	9.91045e-71
NC_014019.1\|WP_013057535.1\|2821600_2822155_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.90592e-12
NC_014019.1\|WP_013057546.1\|2833829_2834408_-\|HAD-IA-family-hydrolase	gnl\|CDD\|319825	cd07523, HAD_YsbA-like, uncharacterized family of the haloacid dehalogenase-like superfamily, similar to the uncharacterized Lactococcus lactis YsbA. The specific function of Lactococcus lactis YsbA is unknown. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.07034e-42
NC_014019.1\|WP_013057547.1\|2834536_2835538_-\|hypothetical-protein	gnl\|CDD\|226728	COG4278, COG4278, Uncharacterized conserved protein [Function unknown].	8.46054e-08
NC_014019.1\|WP_013057551.1\|2837717_2838950_-\|aminopeptidase	gnl\|CDD\|376723	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29).	0
NC_014019.1\|WP_013057548.1\|2835610_2836030_-\|hypothetical-protein	gnl\|CDD\|349995	cd18551, ABC_6TM_LmrA_like, Six-transmembrane helical domain of the multidrug resistance ABC transporter LmrA and similar proteins. This group represents the six-transmembrane helical domain of the multidrug resistance ABC transporter LmrA from Lactococcus lactis and similar proteins. This transmembrane (TM) subunit possesses the ATP-binding cassette (ABC) exporter fold, which is characterized by 6 TM helices per subunit (domain), or a total of 12 TM helices for the complete transporter. The ABC exporters are found in both prokaryotes and eukaryotes, where they mediate the cellular secretion of toxic compounds, a various type of lipids and polypeptides. ABC transporters typically consist of two transmembrane domains (TMDs) and two nucleotide-binding domains (NBDs). The sequences and structures of the TMDs are quite varied between the different type of transporters, suggesting significant structural diversity of the translocated substrates, while NBDs are conserved among all ABC transporters. The two NBDs together bind and hydrolyze ATP, thereby providing the driving force for transport, while the TMDs participate in substrate recognition and translocation across the lipid membrane by alternating between inward- and outward-facing conformations. Moreover, some ABC genes are organized as half-transporters, which must form either homodimers or heterodimers to form a functional transporter. The ABC exporters play a role in multidrug resistance to antibiotics and anticancer agents, and mutations in these proteins have been shown to cause severe human diseases such as cystic fibrosis.	0.00168085

>NC_014019.1|WP_013057542.1|2828899_2830363_+|hypothetical-protein
MNEPSNFSPYLIKQISDAIDDNIKSKCIDFLYDSHSFFSNEKDFIEDYILNILQDTFVLENKLINPKEIRNPAYKRRQSNKKNWLQTLKKDIKAQKPNPIFEDIELAKKVMDKKVDTEHLKKLFGVEKPEDILKIKLKEVEAWAKSKKTNITDFPYLDSKMNYQIEKAFHTDFTFLIAEIILEKYNGNLSNWIDKRLNSWVEAPIFSNESHSLKTNMEVKTNSQEVVLYNDYKVDEEYFIRTIIPVNDNQTVLSKRNMVLDPKDSQIIQFALSQRDEMFYKEKTVTLDLADIVKEIYNSKGVKNYEAVEARIMKIARYHVEGVAKKKNSRDTKFAINFFQKAVIETDEVTGRRYATIVFSDDTHQGFLNQQFVQIYSDVIKKFKDNSLSSLLLYAFQKERLDCYLQEKSYTHFYPYQYFASKVRFRSKKIDVNLKLINESLAEFVSNQVLIQSYQQKLQGFEISFIPLQNYEIQDYFGGEHRETLEG
>NC_014019.1|WP_013057541.1|2827692_2828574_-|Cof-type-HAD-IIB-family-hydrolase
MLLKPKAIFLDMDGTILNRSNKVSIQTKEIIDELRKQGIFVFIATGRAFDEIEELVPEGFQVDGFITSNGMAGYVGKESVFQHSLSLQLVETIIEKARANKVYYELFPYGTPRVTLKQDQSYVENEIREPKPDSVEINEWLSRKQAIKEEIDWKDSVEGSEFSKFYFFARTHEHIDKWKEELEELKKEIDFTTSTSSKHNVEVMVANVNKATGIQQMLKHFNLPEQDILAIGDSNNDLPMFQFASYAVAMKNAPDHIKEIVDDVTEFNCDENGVSHYLSKFLLQKSARINPVL
>NC_014019.1|WP_013057540.1|2826300_2827125_-|kinase/pyrophosphorylase
MNKRKIVYIVSDSVGETAELMVKAVLTQFSGEDIEIQNTSYVEDEGNIDNIIAEARCNQAIIAYTIVIPPLKQYLDQKAQEEGIVAIDLMTPLMSAFSQTFNKKPNLQPRLTRKLDDNYFRRVEAVEFAVKYDDGQDFRGIKRADLVLIGVSRTSKTPLSMYLAHKSLKVANIPLVPEVTPPDELFTIPKNKCIGLVITPDKLNEIRKERLKNLGLASQANYANVDRILEELDYAEKIMKRIGCPIVNVSGKAVEETAEVILSMLKKDKMKGYV
>NC_014019.1|WP_013057539.1|2824677_2826180_-|malate:quinone-oxidoreductase
MSNVYKKTDVILIGAGVMSATLGSLLKELAPEWEIKVFEKLADAGEESSNEWNNAGTGHAALCELNYTSEQADGSIDITKAVRINEQFQLSRQFWSYLVSSNLIHHPQEFIMPIPHISFVQGEKNVSFLKKRFEALSNNPLFQGMEYSDRPEKLKEWMPLVMKGRTSTEAIAATKIDSGTDVNFGALTRMLFTHLKSKSVEINYNHSVENLTRTADGSWEVKVHDIHSGKQEYHTANFVFIGGGGGSLSLLQKTGIPESKHIGGFPVSGLFMVCNNPEVVAQHHGKVYGKAKVGAPPMSVPHLDTRYIDRKKTLLFGPFAGFSPKFLKTGSNLDLINSVKPNNILTMLAAGVKEMGLTKYLIQQVLLSNEKRMEELREFIPNAKSEDWDIVVAGQRVQVIKDTEAGGKGTLQFGTEVVSSADGSVAALLGASPGASTAVHVMLEVLEKCFPQHIEEWESKIKEMIPSYGLSLVENPALFNEIHASTAQMLDLSKKELVYR
>NC_014019.1|WP_013057538.1|2823768_2824428_-|2OG-Fe(II)-oxygenase
MILTNTSLLTKEQTIFNHTGNKIKLEDREIDIVARFEEPLVLVLGNVLSNEECDELIQLSKDKMQRSKIGAAREVNSIRTSSGMFFEESENELVHQIERRLSKIMGPSIEYAEGLQVLKYLPDQEYKAHHDYFTSASKASKNNRISTLVMYLNDVEEGGETYFPKLGLSVSPTKGMAVYFEYFYSDAELNDRTLHGGAPVIKGEKWVATQWMRKQKIRS
>NC_014019.1|WP_013057537.1|2822523_2823348_-|thermonuclease-family-protein
MKEIKAIICTMLAMFMLLLTGCSDEQASHSTTSSTDTKQAVQVEGSSDQENDHSPSKANREDVVGEAATVERVVDGDTLKVKMLNGKRDRVRLLLVDTPETKHPKLGVQPFGPEASAYTKKRLEGQEITLEFDVQERDQYGRLLAYVWIDNELYNEELLAKGLARVAVFPPNTKYVDEFKKIQEQARKSEKGIWSIENYAQEKGYNTDAVKNQSSSNQKDIQSAKSCEGKIKGNQNSKIYHVPTGAHYNQTMNNVIWFCTEKDAQEAGYKKAKN
>NC_014019.1|WP_153254062.1|2822314_2822458_+|hypothetical-protein
MKKRRQQKDTTVSGWEVLAEILLQVPQLLIWPLRLLIRIGRSLLDGI
>NC_014019.1|WP_013057535.1|2821600_2822155_-|GNAT-family-N-acetyltransferase
MKIRKARKEDASAVTELLYDMLGSIARSHTAATTNEEALLRLKAFILSEKNRYSYHHITVAEVDEKVVGLMLCYEGSMLQTLYEPVKRFVRAKLNNPAWEIDIETEHGDYYIDSLCVDEAYRGKGIGTALLNVAKQEAKKRKMFLSLNVEYNNVEAKKLYQRIGFQEHKTIFIDKKPFFYMKTA
>NC_014019.1|WP_013057534.1|2820842_2821403_-|hypothetical-protein
MNIRDLPFNMSYRFNEQLREVPINPHQMKQGIIYLKKRALEEEDECAAAKTYGHIGVYERILGELTSSERHLLLAIYLYDRHADTIGEFLNTIRLGHTYHWQEQWDKANETFQLLIEQLKADEDLHIYEDFVYQYYGKCLLDQRVVSRAHHYFQRALEIRLKKGDKELIESTNSCIRLCLNKLKHS
>NC_014019.1|WP_013057533.1|2819812_2820643_-|YitT-family-protein
MSKTVKDVIFLLIGSFVFSLAVNMFVIPIGLGEGGVTGISIILYYTTHLSTGITNFILNGILLIVGYKFLEKKTIVYTMITIIATSIFLHVTEGWGLHLNEELIGMVFAGVLLGVGIGMILRVGGTTAGSAIIARILNKFLNWKVSHALLIVDLLVVLASYFIIGIEKLLFTIVMLYITTKVIDFVIEGFDAKKAVTVISSNKNEVADQINEQLDRGVTILNGRGNYTKESKEILYVVINKQELIKLKKLIKKIDDEAFVIVHDVRDVIGKGFLSA
>NC_014019.1|WP_013057544.1|2831363_2832386_+|hypothetical-protein
MIKKEFAKIGKQIIRQLSSTVEKYKDIEDHMDLDAHGNPTIKTVAEHHRLSKSQISQLIFYHFLHVDERGIICDVSEKEIAAALNCTVRTVRNNNVVLAETELISYSRSGKGINICIVPYPQYFEEHGFGFMELEYTRFEELILIENVNALRLELRKELVYDNDTIKRQFNPGENTSKISFNDYKIFTPKYTHYKGMMQKIAETQTSAFKTVVQGSTIFFVLKDGAKNGKMSKQEKKDQYDAAIRRTIEETFVKLSGHSTDSTGIVMSSFQNEDIADLVQLSFEYGIERVKSALYSLIEQAFFSHDAQVVENYGGKIRTLIRKELSKNLQDQVPAELTAS
>NC_014019.1|WP_029322439.1|2833230_2833827_+|mechanosensitive-ion-channel
MKDIHWVQQTLFNTGKWIDISEVIIKIILIFIIAQIVIRFARSVINKIFDFRFKTKLLRYNERKEITLKKLCLSIVMYVVYFIVLITSLEAIGINMKALLAGISVAGFITGLGAQNLIKDILNGFFILFEDQFSVGDHVSINDTKGTVEEIGLRTTKIRGVDGEFYFFANSNITKVANYTLGEIPEVHKPEQIKTREE
>NC_014019.1|WP_013057546.1|2833829_2834408_-|HAD-IA-family-hydrolase
MNILWDFDGTIFDTYPTIVKAFKELLTDQTISEGDILKQMKISSDVAIKHFDIEKSLFDKHFHVLEQKINPKDKPAFPHVEDVLSFADTNVIVTHKSRQSTLDILAFFNMEHYFTEIITKDDGYKRKPDSGAYAYLHDKYQLDLVIGDRELDLKPARELGIKTCAFQNDDIEADYHLTSYDQFFTTVVNKNS
>NC_014019.1|WP_013057547.1|2834536_2835538_-|hypothetical-protein
MIAAIIVGAVILLALIIKGIGKPRGFRLYKEELPDELGIHKGNGFEDIVHSLEDSLPKAYVQQVKQRMKGRNTKADEVEWTFFEMKRYFLLNAVIKDVPMFSAKADEVWHEMIMFTVDYERFTDRFFDRFLHHQPNVDTTPSPQPDKRAFFDWMYAHLFDITGNSRLLWGKFFQHPLDKSTLQDFQRLSEDELLDRYFLRNGKWEEQQRHLIQALKEEIKDAKKRMKSGGSSYFKKALKKGNVSNELLFQGFVFYSLYEATDFSRHMNELLLYKKTIYAGDTASYSGYSCSSPWEDNRHHHHHDGGHHHHDSGSSCSSSNCSSSSCGSGCSSS
>NC_014019.1|WP_013057548.1|2835610_2836030_-|hypothetical-protein
MSLSAKKILLLVLVVICLVLVVMQFINRSAEPTSEQAQETLSKLPEQETVKEKAKGDEEAHKYRVYYITIEKIENGTYSGTTKEGTGIKFSDKNLNEPIPSNLKKGDIVKAYFDLEYSTKGLVKVEKVDEMPDDDESSS
>NC_014019.1|WP_013057549.1|2836435_2836927_+|hypothetical-protein
MMFALIVVVGVVALGVASFYVIKRPQGAVDPEDRKPLVSVNGHVKFAEGINQISISKIDMYDQRLVINQVAIIPFNRIQRAEFSKVVKNEKGLHGAPVQRYFGELTIHFTDKNGQETYIRCETPKKNQFHLIYQYDLMKRQLNKRLGLEDLQPYLTLQEPYEL
>NC_014019.1|WP_078081927.1|2837198_2837486_-|DUF4183-domain-containing-protein
MQQEFRYIFPKKVRIFEYYTVAGGSKRIFTDQNALKEYGTQHILDPESYSYSNLFINGVLQPSSNYSVQKGLLIINTEDIPLEKSPVILQMIKVI
>NC_014019.1|WP_013057551.1|2837717_2838950_-|aminopeptidase
MEQFERNIEKYAELAVKVGVNIQKGQVLNINADISSADFVREIAKKAYEAGAKSVDVDWHDDHLVRLKYEKADESVFNEFPAWKAQAREELVKNGGAVLSVISSGPDLLKGVDGKRIAAFQKVSGKAMKKFREAIQSDKISWSIVAVPSKDWAAKVFPDVPEEQQQEKLWEAIFKSVRVDQEEPVAAWEEHNASLHTKVDILNEKRFAKLHYKAPGTDLTIELPDKHIWVGAGSVNEDGNSFMANMPTEEVFTLPKKDGVNGQVTSTKPLSYAGNLIENFTLTFENGKIVDVNAEEGEETLKHLIETDEGAKYLGEVALVPHQSPISQSNIIFYNTLFDENASNHLAIGSSYSFCLEGGKTMSKEELSQNGANDSITHVDFMIGSAEMDIDGIKADGTSEPVFRKGNWAF
>NC_014019.1|WP_013057552.1|2839093_2839888_-|IclR-family-transcriptional-regulator
MERENMVKSVSRALDIVTIVSMEREGVGVTEIAKQMDINKSSVYRILTTLAQYGYIEQDQETGRYKLGYKFLEVSSKLLDSIDLRTEAKPFLQELESETNEVIHLVVYDQGEVVYIEKLEGNQTLRMHSKVGKRAPMHCTSVGKAILAFLPLNTVTSILERKGLPAHTDHTITDEESFLRELSEVKQKGYALDLEENEYGITCIAAPIFDHLGQVVAAVSISGATMRMTNERLTYLQERMVDIGKNISERLGYKTESVKDKSLF
>NC_014019.1|WP_013057553.1|2839939_2840716_-|fumarylacetoacetate-hydrolase-family-protein
MKFVRFAVQDSRHTGVLKEDTISVIKGNIFEKWDYTGQTFSLSEVRLLAPLEPIQIIGIGANYAAAKSELPRELPSIPVFFFKPVSSVIGPNEDIVIPTAIKHVKFESELAVIIGKEAKNIAKEDVLDYIFGYTIGNDVTAPDYFHEDGHWTIGKSFDSFTPLGPVIETELDFKSIHVKAFLNGVEKQNSSTDLMIISVEQMIAYLSTVMTLKPGDVVLTGSPVGAELVSANDVIECTIREIGTLQNPFVAEKERVNV

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Crispr_ID: NC_014019_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014019_9

3858774-3858868

Orphan

Consensus_repeat	Method
CCTTGGCCCCCTCCTCCAGGTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014019_9

>merge|NC_014019|9|3858774-3858868|CRISPRCasFinder
CCTTGGCCCCCTCCTCCAGGTGGTGGCGGTGGAAACCCTTGACCTCCTCCTCCAGGTGGCGGTGGCGGAAATCCTTGGCCTCCTCCTCCAGGTGG

>NC_014019|9|9|3858774-3858868|CRISPRCasFinder
CCTTGGCCCCCTCCTCCAGGTGG	TGGCGGTGGAAACCCTTGACCTCCTCCTCCAGGTGGCGGTGGCGGAAAT
CCTTGGCCTCCTCCTCCAGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_014019.1\|WP_013058713.1\|3864551_3864875_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013058701.1\|3853221_3854040_-\|membrane-protein-insertase-YidC	unknown	unknown	gnl\|CDD\|179508
NC_014019.1\|WP_013058716.1\|3865983_3866754_-\|sporulation-protein	unknown	unknown	gnl\|CDD\|369195
NC_014019.1\|WP_013058697.1\|3849460_3850147_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013058699.1\|3851110_3851620_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596
NC_014019.1\|WP_013058704.1\|3856103_3856931_-\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|170086
NC_014019.1\|WP_013058711.1\|3863448_3864153_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NC_014019.1\|WP_013058706.1\|3857720_3858347_-\|FMN-dependent-NADH-azoreductase	unknown	unknown	gnl\|CDD\|224103
NC_014019.1\|WP_013058700.1\|3851655_3852861_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013058698.1\|3850148_3850991_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NC_014019.1\|WP_013058712.1\|3864347_3864500_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013058708.1\|3859135_3859681_-\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_029323930.1\|3860370_3861537_+\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|274033
NC_014019.1\|WP_013058703.1\|3854545_3855925_-\|PTS-sucrose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|131051
NC_014019.1\|WP_013058717.1\|3866740_3867577_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NC_014019.1\|WP_139031980.1\|3852950_3853130_+\|hypothetical-protein	unknown	unknown	unknown
NC_014019.1\|WP_013058714.1\|3865121_3865748_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NC_014019.1\|WP_013058705.1\|3856968_3857466_-\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376324
NC_014019.1\|WP_013058710.1\|3861780_3863229_-\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732
NC_014019.1\|WP_078082119.1\|3867580_3867835_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_014019.1\|WP_013058701.1\|3853221_3854040_-\|membrane-protein-insertase-YidC	gnl\|CDD\|179508	PRK02944, PRK02944, YidC family membrane integrase SpoIIIJ.	6.90293e-106
NC_014019.1\|WP_013058716.1\|3865983_3866754_-\|sporulation-protein	gnl\|CDD\|369195	pfam07070, Spo0M, SpoOM protein. This family consists of several bacterial SpoOM proteins which are thought to control sporulation in Bacillus subtilis.Spo0M exerts certain negative effects on sporulation and its gene expression is controlled by sigmaH.	9.72843e-93
NC_014019.1\|WP_013058699.1\|3851110_3851620_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	1.04918e-15
NC_014019.1\|WP_013058704.1\|3856103_3856931_-\|PRD-domain-containing-protein	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	6.7835e-49
NC_014019.1\|WP_013058711.1\|3863448_3864153_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	1.12353e-162
NC_014019.1\|WP_013058706.1\|3857720_3858347_-\|FMN-dependent-NADH-azoreductase	gnl\|CDD\|224103	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism].	1.74036e-85
NC_014019.1\|WP_013058698.1\|3850148_3850991_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.45239e-46
NC_014019.1\|WP_013058705.1\|3856968_3857466_-\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|376324	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.	1.61702e-69
NC_014019.1\|WP_013058703.1\|3854545_3855925_-\|PTS-sucrose-transporter-subunit-IIBC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	0
NC_014019.1\|WP_013058717.1\|3866740_3867577_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.30622e-48
NC_014019.1\|WP_013058714.1\|3865121_3865748_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	2.5199e-46
NC_014019.1\|WP_029323930.1\|3860370_3861537_+\|rod-shape-determining-protein-RodA	gnl\|CDD\|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	3.21794e-108
NC_014019.1\|WP_013058710.1\|3861780_3863229_-\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	2.1468e-137

>NC_014019.1|WP_013058706.1|3857720_3858347_-|FMN-dependent-NADH-azoreductase
MANVLYVKVNPQVDEASFSTRLAQVFLDEYKTANPTDTVTTLDLYKETVPFIDGDVLAAWGKAGAGEELSTVELEKVTRMGELVEQFLQADKVIFSAPMWNLSFPPLMKAYIDNILIAGKTFKYTENGPVGLASDKKVVLLEARGGVYSEGPAAELEFTQSYLRTVMSFIGVQDFQLVVAEGMAYTPAEADNILAKASEKAKEVASTF
>NC_014019.1|WP_013058705.1|3856968_3857466_-|PTS-glucose-transporter-subunit-IIA
MFKKLFGNKTKSKETTVLAPLSGNILPISEVPDPVFSQKMMGDGFAIEPSEGQVVSPVAGEVVQLFHTKHAVGLKTEAGTEVLIHIGLETVAMEGEGFEAHVAQGDKVSVGTPLITFDLALIQEKAKSIITPIVITNSDASESFEILAQGTVQKGETACAKVTMK
>NC_014019.1|WP_013058704.1|3856103_3856931_-|PRD-domain-containing-protein
MKILKVLNNNAVVFKEGGVEKIAMGPGIAFQKGKNDLINAAKVEKVFVMKEEQEKFQELLKNLPEEHIQVAEEIISYAEQQLSATLSHHVHIALSDHLSFAVERIARGISIQNKLLNEIKSLYQPEYAIGVWALQHIKKRLDITMPVDEAGYIALHIHTAKLNSPGMQQLMMNTTIINEMVTIIKKELNTEIDENSMSYQRLLTHLRFALNRLAQNEPFHEMDEEMLDVLKVKYKKSYQCAETIKQFVKDEYEINFPEAELGYITLHICRIEQRI
>NC_014019.1|WP_013058703.1|3854545_3855925_-|PTS-sucrose-transporter-subunit-IIBC
MDVKEIAKKLVPLLGGKENIASAQHCATRLRLVIRDESKIDQKGLDEIEDVKGAFSNSGQFQIIFGTGLVNKIHAAFVKELGADEAAAPVDHQEEMKKKMNPFARFARMLSNIFVPIIPAIVASGLLMGLLGMMKAFHWVSKDSALFVLLDMFSGAAFIILPILIGFSAAKEFGSNPYLGAVIGGILTHPMLLNPWTLADAKPEYMDLFGLSIPLIGYQGTVVPILLAIYVMSKIEKGLRKIVPNSVDLLVTPFLTVIITGFVSLVFIGPFGRYIGDLISISLQSLYDVAGVFAGILFGGLYSTIVLTGLQHSFHAIEAGLLANPKIGVNFLLPIWACANVAQGGAGLAVYFKTKNAKTKKIAIPAAISSFLGITEPIIFGVNLRLRKPFIAAAIGGAAGGGYVVLMHVVANAYGLTGIPMMAIAAPLGMSNLIHYIIGMIISVGVAFGVTWFMKLKED
>NC_014019.1|WP_013058701.1|3853221_3854040_-|membrane-protein-insertase-YidC
MKRNKKLLLLGLMGALLLALAGCSSTKTPVTATSGGFWDHYFVYPLSMALTKIAEWAGGSYGLSIIIATVIIRLVLLPLILKQQKSTMAMQALRPEMEKIQKKYAGKKDPETQQKQQKEMMQLYQTHKINPVGGCLPIFIQMPIIIAFYNAIARTHEIAQHSFLWVSLGKPDPYFILPVVAAITTFLQIRVSMTDEIQPPMKMMMNIMPIFILVAGISLPSALALYWVIGNLFGIGQGYYLKKRMSLLKEKDAANNTAQAKTKPSPKSKSKS
>NC_014019.1|WP_139031980.1|3852950_3853130_+|hypothetical-protein
MNLIERRTNGIHELNLLLLAVDFRARLRLALQSTARSNEIDEISVHHNKKNKPLIKYFD
>NC_014019.1|WP_013058700.1|3851655_3852861_-|hypothetical-protein
MVKKIALCLLFLMLFPMQINAANTVKVSFIRQGNLWVYDNGTERQLSYARHASMPQWSSHGDIVAYAENDSLMIAPLKGKPLLVEHDVTHYQWSPVAEELAYISNGILVYYNVKTHEKKRVAVGVDQFSWFPEGDRFLITSAAALAPTGWGPVKLYTVSKYAGLDVKKVEAFTTLPAENDSFFAYTTSSFKWSPNGQWISFIAIPTASMSADANKLCIITKEGKAFQVVGDMLNVPNWFKWSNEESVLAFINGEGRFATENKKFTLKEMPVFKEHVFTPKGFADWDFTWTEKDNIIISRVPEAGWSNDEKKRPLPFLYSMNVKTNKQSQFTFPQKGLGDYAPVYHKATNQTMWIRTNRKQANLLTRVKDTKNDKVLISGLDLPENYYELYRWNEVFSVYNP
>NC_014019.1|WP_013058699.1|3851110_3851620_-|GNAT-family-N-acetyltransferase
MNIRLLVKEDADAYFELRLRALKDHPESFILSYEEEYEKEIADIRNYFPSSQSEFVVGAFIEKQLVGIVGFQQQKPLKVQHKGDIWGMYVAPEARGKGLGKKLLKTAVEQAFSKTNVLQIYLAVAAKNEGAKVLYKSLGFTSYAYEKRALQVDGEFIDEEHMVLCMKSL
>NC_014019.1|WP_013058698.1|3850148_3850991_-|ATP-binding-cassette-domain-containing-protein
MEKLIELKNVAKVYKKHTVLENIHTTLYKGETVAIVGKNGAGKSTFLKLIGGLSKPTKGTIHLHKETGTPGFVVEQFPQELRFTLAGYLQHMGRIQGLSKKKRSSRIEELLETFEMVEFRHEEIISFSKGMKQKVNMMQALLSSSKLLLLDEPLSGLDARAQLEVERIFTKLKERGMTIVFTCHEERLIHAVADRVITIGSQRILKNERVQLIEHLTVIEANVILNKPLRLLKEKCTKIEQHGNYWIFYIDKKYVNEFLAELLAVQAEVVKLYHMEREEI
>NC_014019.1|WP_013058697.1|3849460_3850147_-|hypothetical-protein
MGALIRYHFITYIKSYRYIPPLALYIISLCMNYTYRPNPVLDSFFNTALFLFFLTTWFTMSLFHAEDSSQEVITKLHVGKKSKYFMSKLITCMLLFTFLSAVSIAYPVLLDMFEVDISTKQMVFGFIIHWTFSLLGMSIGLVFTRDVVREGSLSWFGPLFILIVTLAAAGVSFPYQGGGLLLYVLPPVSAIIQFINEGLNKFLVFGWALLYAIALISLYLWRANRRDV
>NC_014019.1|WP_013058708.1|3859135_3859681_-|hypothetical-protein
MIIGASVIAFLLLWWTIFYSGRYYHYVSEPVGKRISLHVGIHVTLVVGVNACLWLEQPLLFSSILAGCAGLGAGWFVGIPFSVKSILSGIMGGIGTGVSFYISMSMWMDQFNWLSFLLIGTSVIFSGSSLFQVLKSIPSFEKVLVKMWVQHPFLIAPILITVFWLYNFIEKYFPQADPTRK
>NC_014019.1|WP_029323930.1|3860370_3861537_+|rod-shape-determining-protein-RodA
MGENQRNVSRFDWNLAFLIFLLFCVSVVAIHSAEKIGQYDKNFVAQQVVFYIIGMVIIGFIMRFDSDQLQKLTWVFYGFGNFLLLLLLVAPSSIAREINGAKSWFTLPGFSLQPSEFMKVFLIITLSTVIVKHNEKYRIRTVREDFLLLGKLGAVLALPLLLIMQQPDLGTALVFLAITIGLVFVSGVSWKIIAPAFLGITAVGSVILGLVVYAPNLLEKYLGVKQYQFGRIYSWLDPESYSSGEGYHLKKSLDAIGSGMVNGKGIGNGVVYLPEGQTDFIFAVIGEEFGFIGASIVISLFFVLVYYLIKLGLETKNEFNSYLCVGVISMLTFHVFQNIGMTIQVLPITGIPLPFISYGGSSLMGNMFAMGLMFGISWHHKRYMFGND
>NC_014019.1|WP_013058710.1|3861780_3863229_-|SulP-family-inorganic-anion-transporter
MMASIKQQWFSNVRADILSGMTVALALIPEALAFSIIAGVDPMVGLYASFCMAIVIAFTGGRPAMISAATGAMSLLMIDLVKDHGIEYLFAATVLTGIIQILLGVLKVGRFLSFLPQTVMIGFVNALGILIFTAQLPHFQGANWMMYAMVAGTLLIVYLFPLMTKAIPSPLVAIVLMTIVAIVFHLDLKTVGDMGNITRSLPVLHFPKVDLSVETLLIILPYSLPLAIVGLLESMLTATVLDEITDTPSNKNKEARGQGIANIVTGFFGGMAGCAMIGQSMINVKSGGRGRLSTLVAGVFLLFLIMVLGDVVKQIPMAALVGVMFMVAAGTFDWQSLKDLTKYPLSDAIVMVVTVVIVLFTHNLALGVMVGIVLSTIVFGWKMAKIKTTSQTEGNMKQYRVSGQLFFATISFFMDEFQYETDPDTIIIDFSSSHIWDQSAVIGISKIIDKYERLNKKVIVKGLNEDSKKIVRQIGITSLSNK
>NC_014019.1|WP_013058711.1|3863448_3864153_-|purine-nucleoside-phosphorylase
MSVHIGAKQGDIAETILLPGDPLRAKYIAETFLEDVTCYNEVRGMLGFTGTYKGKRVSVQGTGMGVPSIAIYVNELMNEYGVQNLIRVGTCGAIQKDVKVRDVILAMSSSSDSQMNRVKFGPIDYAPTANFDLLKRAYDAGVEKGLQLKVGSVFTSDQFYNEDGQLEKLAAHGVLAVEMETTALYTLAAKYGRNALSVLTVSDHIFTGEETTSEERQTTFNDMIVVALEAAINE
>NC_014019.1|WP_013058712.1|3864347_3864500_+|hypothetical-protein
MGKKHRNRINSPKKNNHIPKEAIIAEHEAHGDEYSATNRKNGPGHHTRDY
>NC_014019.1|WP_013058713.1|3864551_3864875_-|hypothetical-protein
MLSVWTTIKKQFNISTEYDVTIMQTEEKGEKRGYKPVHRLTITAFDHQDAATQVFQMFNIADNLPKDCDARFISTGDILLIDEGTRGKYYYKLWTDGWQKVNRLHVR
>NC_014019.1|WP_013058714.1|3865121_3865748_-|phosphatase-PAP2-family-protein
MVNRTTKYSLFIVSLLAFFLLILFTFNTPWVKQLDFNVLHTIEGWRTDTLTPIIIFITTVGSWYVTAPIWFAIIVFLLYKRKGLLALYITLVFWGVRALNWGLKEIFARPRPDWSQVVPASHYSFPSGHAMNSMAFYSGVLLLIWMYTRSRAVKTAAACVIAIVILLIGFSRLYLGVHFLTDILAGYCLGLAWSLGVYLLSKRLYNQK
>NC_014019.1|WP_013058716.1|3865983_3866754_-|sporulation-protein
MALFNKALARIGIGAARVDAKLVNDEFRAGEKIEGIVEVYGGNVEQKIDSIYLRLFTTYVKERDDKKYKQDIELNTFKINDPFTIQPSETKSIPFTFQLPDDTPVTLGRTRVWVATSLDIKDAVDPSDIDHVKVLPNLMVTSAIEAMEQLGFRLRQVECEEAPRRMRKRLPFVQEFEFVPSGGLYAGKVDEIEIIVQPSGLHDYDLFIEVDRRARGFGGFLSEMLDADESLVHVHVSEKEIPQLKNILTNIISRYS
>NC_014019.1|WP_013058717.1|3866740_3867577_-|serine/threonine-protein-kinase
MMKNRMFKHLHRWLVDRPFKKGKVICGRYEIIDVLGMGSYGITYVANDIVQQKEVVVKQLRKTKQRTSQGLKSYHYEAKLLSQLNHPQIPSLYEAIETDEGCFLVMELIQGKTFEGLIFEEKCVYTEEQALDILLNILDVVSAIHEQGIIHRDLRIPNIIDVNGTIYVIDFGLARFLGDHEETSTLIEEQQFMRQTSAASDIYALGHFLLFLLYSGYEPTEKQERSWEQELSLSTPIKIIIQKMLRADESYESIKSLQKDIYDYINSKNSGRGKYGAI
>NC_014019.1|WP_078082119.1|3867580_3867835_-|hypothetical-protein
MFRKIFESLTGSKHRRYSSSDRHYRRPRHYSSSDQHYRRPRHHSSSSDYKRSKYYDSHSHSKYGHHHYKRKRKSGSFFSSFFSS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

242611 : 250873

Synechococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013055036.1\|242611_243904_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	5.9e-19	25.5
WP_013055037.1\|243978_244686_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FGF0	Synechococcus_phage	1.2e-42	40.2
WP_013055038.1\|244693_244945_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_013055039.1\|244941_245628_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_013055040.1\|245611_247843_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.2e-157	41.3
WP_013055041.1\|247818_249234_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.3e-55	34.6
WP_013055042.1\|249260_250298_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FZ01	Synechococcus_phage	3.8e-69	45.6
WP_013055043.1\|250294_250873_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.3e-29	39.2

DBSCAN-SWA_2

2199772 : 2207984

Bacillus_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013056904.1\|2199772_2200549_+	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	8.7e-10	41.9
WP_013056905.1\|2200620_2201169_+	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-32	43.9
WP_041816550.1\|2201192_2202662_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	8.5e-115	48.4
WP_013056907.1\|2202677_2203358_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	G3MA22	Bacillus_virus	2.2e-41	43.3
WP_013083029.1\|2203392_2204214_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	1.1e-92	64.1
WP_013056909.1\|2204395_2204833_+	RNA-binding protein S1	NA	NA	NA	NA
WP_013056910.1\|2205572_2207984_+	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	1.6e-17	36.9

DBSCAN-SWA_3

4204116 : 4213416

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013059044.1\|4204116_4205634_-	ATP-dependent DNA helicase RecQ	G5CQD7	Megavirus	1.9e-53	31.4
WP_013059045.1\|4205657_4206707_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013059046.1\|4206964_4207213_+	ferredoxin	A0A127AYY7	Bacillus_phage	3.6e-18	54.1
WP_013059047.1\|4207291_4207867_-	ECF transporter S component	NA	NA	NA	NA
WP_013059048.1\|4208462_4210037_+	phosphoglycerate dehydrogenase	A0A2H4PQU8	Staphylococcus_phage	1.3e-28	29.8
WP_013059049.1\|4210068_4210758_-	peptidoglycan DD-metalloendopeptidase family protein	Q8SBN9	Clostridium_phage	5.2e-14	42.1
WP_013059050.1\|4210927_4212700_-	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	7.5e-25	26.3
WP_013059051.1\|4212699_4213416_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.2e-47	42.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NC_014031

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1560 : 65057

Catovirus(23.08%)

coat,integrase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013060408.1\|1560_2493_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_013060409.1\|3644_4220_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_041816925.1\|4809_4989_-	hypothetical protein	NA	NA	NA	NA
WP_162485303.1\|6141_6771_+	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	6.1e-38	48.0
WP_041816919.1\|7237_7933_+	peptidase	NA	NA	NA	NA
WP_013060415.1\|8351_9443_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A2P1ELS7	Moumouvirus	2.0e-92	47.8
WP_013060416.1\|9435_10422_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	9.6e-46	32.6
WP_013060417.1\|10422_11247_+	SDR family oxidoreductase	A0A2L2DJC0	Acanthamoeba_polyphaga_mimivirus	7.0e-34	35.2
WP_013060418.1\|11480_11678_-	hypothetical protein	NA	NA	NA	NA
WP_013060419.1\|12089_12713_-	peptidase	A0A1V0SAM1	Catovirus	2.1e-06	30.6
WP_013060420.1\|12910_13828_-	GDP-mannose 4,6-dehydratase	A0A0E3FNQ3	Synechococcus_phage	3.2e-35	34.1
WP_041816920.1\|13959_15177_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_013060422.1\|15403_16318_+	NAD-dependent epimerase/dehydratase family protein	A0A222YY99	Synechococcus_phage	4.3e-24	26.9
WP_013060423.1\|16676_17402_+	glycosyltransferase	A0A1V0S9B9	Catovirus	1.1e-06	26.4
WP_013060425.1\|17983_19225_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_013060426.1\|19273_20344_-	glycosyltransferase	NA	NA	NA	NA
WP_013060427.1\|20662_21385_+	glycosyltransferase	NA	NA	NA	NA
WP_013060430.1\|21676_22228_+	DUF2642 domain-containing protein	NA	NA	NA	NA
WP_013060431.1\|22244_22463_+	hypothetical protein	NA	NA	NA	NA
WP_013060432.1\|22459_23746_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_013060433.1\|24127_24562_+	hypothetical protein	NA	NA	NA	NA
WP_013060434.1\|24944_25373_-\|coat	spore coat protein	NA	NA	NA	NA
WP_013060435.1\|25410_25944_-\|coat	spore coat protein	NA	NA	NA	NA
WP_013060436.1\|26079_26355_-	hypothetical protein	NA	NA	NA	NA
WP_013060438.1\|27905_28724_+	YncE family protein	NA	NA	NA	NA
WP_041816921.1\|29341_29998_+	PIG-L family deacetylase	NA	NA	NA	NA
WP_013060440.1\|29994_31281_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_013060441.1\|31296_32472_+	carbamoyl-phosphate synthase	NA	NA	NA	NA
WP_013060442.1\|32477_33536_+	phosphotransferase	NA	NA	NA	NA
WP_013060443.1\|33707_34025_+	hypothetical protein	NA	NA	NA	NA
WP_013060445.1\|35372_35942_+	kinase	NA	NA	NA	NA
WP_013060446.1\|36036_36534_-	hypothetical protein	NA	NA	NA	NA
WP_013060447.1\|36884_37370_-	hypothetical protein	NA	NA	NA	NA
WP_013060448.1\|37814_38291_-	hypothetical protein	NA	NA	NA	NA
WP_162485304.1\|38482_39633_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	7.6e-103	69.4
WP_013060453.1\|40826_41312_+	hypothetical protein	NA	NA	NA	NA
WP_013060454.1\|42031_42955_-	beta-propeller fold lactonase family protein	NA	NA	NA	NA
WP_011106160.1\|43123_44305_+\|transposase	IS256-like element ISBame1 family transposase	A0A220NQR7	Corynebacterium_phage	1.5e-32	27.0
WP_013060455.1\|45450_46014_+	hypothetical protein	NA	NA	NA	NA
WP_013060456.1\|46558_47902_+	FAD-binding oxidoreductase	A0A0B5JBT9	Pandoravirus	2.2e-40	28.2
WP_013060457.1\|48367_49039_+	sulfotransferase family 2 domain-containing protein	NA	NA	NA	NA
WP_013060462.1\|50819_51482_-	hypothetical protein	NA	NA	NA	NA
WP_013060463.1\|52462_53218_-	hypothetical protein	NA	NA	NA	NA
WP_013060464.1\|53777_54029_+	hypothetical protein	NA	NA	NA	NA
WP_013060465.1\|54622_55999_-	glycosyltransferase	NA	NA	NA	NA
WP_013060467.1\|57458_58190_-	hypothetical protein	NA	NA	NA	NA
WP_013060468.1\|58854_59190_-	SPW repeat protein	NA	NA	NA	NA
WP_013060469.1\|59528_59873_+	hypothetical protein	NA	NA	NA	NA
WP_013060470.1\|60533_61715_-\|transposase	IS256-like element ISBame1 family transposase	A0A220NQR7	Corynebacterium_phage	7.2e-32	26.8
WP_013060471.1\|62176_62395_+	hypothetical protein	NA	NA	NA	NA
WP_013060472.1\|62513_62819_+	hypothetical protein	NA	NA	NA	NA
WP_013060474.1\|63430_63643_+	hypothetical protein	NA	NA	NA	NA
WP_162485305.1\|63901_65057_+\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	1.6e-39	62.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014025

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_014019

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NC_014031

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection