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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_011601 Escherichia coli O127:H6 str. E2348/69, complete genome 5 crisprs cas14j,DinG,cas3,RT,DEDDh,csa3 0 5 13 0
NC_011602 Escherichia coli O127:H6 str. E2348/69 plasmid pE2348-2, complete sequence 0 crisprs NA 0 0 0 0
NC_011603 Escherichia coli O127:H6 str. E2348/69 plasmid pMAR2, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NC_011601
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_011601_1 319477-319624 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_011601_2 2474425-2474538 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_011601_3 2618029-2618144 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_011601_4 4343680-4343881 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_011601_5 4630762-4630885 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_011601_5 5.1|4630795|58|NC_011601|CRISPRCasFinder 4630795-4630852 58 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14191-14248 0 1.0
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194046-194083 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194139-194176 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194232-194269 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204540-204577 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204633-204670 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204726-204763 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195374-195411 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195467-195504 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195560-195597 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176329-176366 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176422-176459 1 0.974
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176515-176552 1 0.974
NC_011601_3 3.1|2618064|46|NC_011601|CRISPRCasFinder 2618064-2618109 46 LC487996 Stx2-converting phage Stx2a 981509 genes for Shiga toxin 2 production region, complete sequence 15760-15805 1 0.978
NC_011601_3 3.1|2618064|46|NC_011601|CRISPRCasFinder 2618064-2618109 46 MT833387 Escherichia phage HF4s, complete genome 30677-30722 1 0.978
NC_011601_3 3.1|2618064|46|NC_011601|CRISPRCasFinder 2618064-2618109 46 JQ011316 Escherichia phage TL-2011a, partial genome 12041-12086 2 0.957
NC_011601_3 3.1|2618064|46|NC_011601|CRISPRCasFinder 2618064-2618109 46 MT740315 Escherichia phage JEP4, complete genome 30108-30153 2 0.957
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 MF374379 Escherichia phage DN1, complete genome 31109-31146 6 0.842
NC_011601_3 3.1|2618064|46|NC_011601|CRISPRCasFinder 2618064-2618109 46 MT813197 Escherichia phage vB_EcoP_Kapi1, complete genome 9866-9911 6 0.87
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229328-229365 8 0.789
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239822-239859 8 0.789
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230734-230771 8 0.789
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211704-211741 8 0.789
NC_011601_4 4.2|4343815|56|NC_011601|PILER-CR 4343815-4343870 56 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 13988-14043 9 0.839
NC_011601_5 5.1|4630795|58|NC_011601|CRISPRCasFinder 4630795-4630852 58 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31294-31351 9 0.845
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_CP019203 Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence 107556-107593 10 0.737
NC_011601_1 1.1|319532|38|NC_011601|CRISPRCasFinder 319532-319569 38 NZ_LN868945 Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence 74014-74051 10 0.737
NC_011601_4 4.2|4343815|56|NC_011601|PILER-CR 4343815-4343870 56 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87116-87171 11 0.804
NC_011601_5 5.1|4630795|58|NC_011601|CRISPRCasFinder 4630795-4630852 58 NZ_CP053046 Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence 58261-58318 13 0.776
NC_011601_4 4.1|4343716|63|NC_011601|PILER-CR 4343716-4343778 63 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87115-87177 15 0.762
NC_011601_5 5.1|4630795|58|NC_011601|CRISPRCasFinder 4630795-4630852 58 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 63884-63941 15 0.741
NC_011601_5 5.1|4630795|58|NC_011601|CRISPRCasFinder 4630795-4630852 58 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 110182-110239 15 0.741

1. spacer 5.1|4630795|58|NC_011601|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 0, identity: 1.0

gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccagcgcct	CRISPR spacer
gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccagcgcct	Protospacer
**********************************************************

2. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
atggcgcaagaatctgtaggcctgataagcgtagcgca	Protospacer
.*************************************

3. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
atggcgcaagaatctgtaggcctgataagcgtagcgca	Protospacer
.*************************************

4. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
gtggcgcgagaatctgtaggcctgataagcgtagcgca	Protospacer
*******.******************************

5. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
atggcgcaagaatctgtaggcctgataagcgtagcgca	Protospacer
.*************************************

6. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
atggcgcaagaatctgtaggcctgataagcgtagcgca	Protospacer
.*************************************

7. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
gtggcgcgagaatctgtaggcctgataagcgtagcgca	Protospacer
*******.******************************

8. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
atggcgcaagaatctgtaggcctgataagcgtagcgca	Protospacer
.*************************************

9. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
atggcgcaagaatctgtaggcctgataagcgtagcgca	Protospacer
.*************************************

10. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
gtggcgcgagaatctgtaggcctgataagcgtagcgca	Protospacer
*******.******************************

11. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
atggcgcaagaatctgtaggcctgataagcgtagcgca	Protospacer
.*************************************

12. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
atggcgcaagaatctgtaggcctgataagcgtagcgca	Protospacer
.*************************************

13. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 1, identity: 0.974

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
gtggcgcgagaatctgtaggcctgataagcgtagcgca	Protospacer
*******.******************************

14. spacer 3.1|2618064|46|NC_011601|CRISPRCasFinder matches to LC487996 (Stx2-converting phage Stx2a 981509 genes for Shiga toxin 2 production region, complete sequence) position: , mismatch: 1, identity: 0.978

ctttcatgtgcggcatgtgcgctgaaagccgcgccattactggctt	CRISPR spacer
ctttcatgtgcggcatgtacgctgaaagccgcgccattactggctt	Protospacer
******************.***************************

15. spacer 3.1|2618064|46|NC_011601|CRISPRCasFinder matches to MT833387 (Escherichia phage HF4s, complete genome) position: , mismatch: 1, identity: 0.978

ctttcatgtgcggcatgtgcgctgaaagccgcgccattactggctt	CRISPR spacer
ctttcatgtgcggcatgtgcgctgaaatccgcgccattactggctt	Protospacer
*************************** ******************

16. spacer 3.1|2618064|46|NC_011601|CRISPRCasFinder matches to JQ011316 (Escherichia phage TL-2011a, partial genome) position: , mismatch: 2, identity: 0.957

ctttcatgtgcggcatgtgcgctgaaagccgcgccattactggctt	CRISPR spacer
ctttcatgtgcggcatgttcgctgaaatccgcgccattactggctt	Protospacer
****************** ******** ******************

17. spacer 3.1|2618064|46|NC_011601|CRISPRCasFinder matches to MT740315 (Escherichia phage JEP4, complete genome) position: , mismatch: 2, identity: 0.957

ctttcatgtgcggcatgtgcgctgaaagccgcgccattactggctt	CRISPR spacer
ctttcatgtgtggcatgtacgctgaaagccgcgccattactggctt	Protospacer
**********.*******.***************************

18. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 6, identity: 0.842

-gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
tattgcg-gagaaaatgtaggcctgataagcgtagcgca	Protospacer
 .* *** .****  ************************

19. spacer 3.1|2618064|46|NC_011601|CRISPRCasFinder matches to MT813197 (Escherichia phage vB_EcoP_Kapi1, complete genome) position: , mismatch: 6, identity: 0.87

ctttcatgtgcggcatgtgcgctgaaagccgcgccattactggctt	CRISPR spacer
gttgtttgtgcggcatgtactctgaaagccgcgccattactggctt	Protospacer
 ** . ************.* *************************

20. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

gtggcgcaagaatctgtaggcctgataagcgtagcgca----	CRISPR spacer
gtggcgcgagaatttgtaggcctgataag----acgcgttag	Protospacer
*******.*****.***************    .***.    

21. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

gtggcgcaagaatctgtaggcctgataagcgtagcgca----	CRISPR spacer
gtggcgcgagaatttgtaggcctgataag----acgcgttag	Protospacer
*******.*****.***************    .***.    

22. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

gtggcgcaagaatctgtaggcctgataagcgtagcgca----	CRISPR spacer
gtggcgcgagaatttgtaggcctgataag----acgcgttag	Protospacer
*******.*****.***************    .***.    

23. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

gtggcgcaagaatctgtaggcctgataagcgtagcgca----	CRISPR spacer
gtggcgcgagaatttgtaggcctgataag----acgcgttag	Protospacer
*******.*****.***************    .***.    

24. spacer 4.2|4343815|56|NC_011601|PILER-CR matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.839

tacag-tgcccgatgcgacgctgccgcgtcttatcgggcctacaaa-agttctgaacc	CRISPR spacer
-acggatgcccgatgcgacgctggcgcgtcttatcgggcctacaaacggccccgaat-	Protospacer
 **.* ***************** ********************** .*..*.***. 

25. spacer 5.1|4630795|58|NC_011601|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.845

gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccagcgcct--	CRISPR spacer
gccgttgccaaatgtaggccggataaggcgtttacgccgcatccggcatt---tgcttag	Protospacer
*********.**********************.*************** .   .**.*  

26. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_CP019203 (Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence) position: , mismatch: 10, identity: 0.737

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
acgtttctgcaacctgtaggcctgataagcgtagcgcc	Protospacer
..* . * . **.************************ 

27. spacer 1.1|319532|38|NC_011601|CRISPRCasFinder matches to NZ_LN868945 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.737

gtggcgcaagaatctgtaggcctgataagcgtagcgca	CRISPR spacer
acgtttctgcaacctgtaggcctgataagcgtagcgcc	Protospacer
..* . * . **.************************ 

28. spacer 4.2|4343815|56|NC_011601|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.804

tacagtgcccgatgcgacgctgccgcgtcttatcgggcctacaaaagttctgaacc----	CRISPR spacer
cacgatgcctgatgcgacgctgccgcgtcttatcaggcctacaaaa----tcaatcgctt	Protospacer
.**..****.************************.***********    * **.*    

29. spacer 5.1|4630795|58|NC_011601|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 13, identity: 0.776

--gccgttgccgaatgtaggccggataaggcgttcacgccgcatccggcaaccagcgcct	CRISPR spacer
caaccg--ggctaatgtatgccggataaggcgtttacgccgcatccggcaacctgacata	Protospacer
  .***  * * ****** ***************.****************** *   . 

30. spacer 4.1|4343716|63|NC_011601|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.762

ttggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcctacattggtgccgga	CRISPR spacer
tcggtgcacgatgcctgatgcgacgctgccgcgtcttatcaggcctaca--------aaa	Protospacer
*.************************** ********************        ..*

31. spacer 5.1|4630795|58|NC_011601|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 15, identity: 0.741

gccgttgccgaa----tgtaggccggataaggcgttcacgccgcatccggcaaccagcgc	CRISPR spacer
----ttttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagcta	Protospacer
    ** .*. .    *************************************  ***  

32. spacer 5.1|4630795|58|NC_011601|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 15, identity: 0.741

gccgttgccgaa----tgtaggccggataaggcgttcacgccgcatccggcaaccagcgc	CRISPR spacer
----ttttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagcta	Protospacer
    ** .*. .    *************************************  ***  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 720890 : 773583 74 Enterobacteria_phage(48.39%) lysis,holin,terminase,transposase,capsid,tail,integrase,head,portal attL 720803:720817|attR 771763:771777
DBSCAN-SWA_2 816285 : 925828 113 Salmonella_phage(60.71%) lysis,protease,tRNA,terminase,plate,head,capsid,tail,integrase,transposase,portal attL 852346:852371|attR 886489:886514
DBSCAN-SWA_3 1038705 : 1148661 106 Enterobacteria_phage(50.0%) lysis,protease,holin,terminase,tail,integrase,transposase,portal attL 1085463:1085486|attR 1139595:1139618
DBSCAN-SWA_4 1268128 : 1318903 57 Escherichia_phage(35.9%) lysis,tRNA,holin,terminase,head,tail,integrase,transposase,portal attL 1263175:1263191|attR 1291765:1291781
DBSCAN-SWA_5 1427474 : 1514080 95 Stx2-converting_phage(26.79%) protease,holin,terminase,head,capsid,tail,integrase,transposase,portal attL 1427311:1427336|attR 1480552:1480577
DBSCAN-SWA_6 1864234 : 1910454 58 Enterobacteria_phage(72.34%) tRNA,holin,terminase,plate,capsid,tail,integrase,head,portal attL 1866636:1866660|attR 1903095:1903119
DBSCAN-SWA_7 2218398 : 2236163 16 Bacillus_phage(16.67%) NA NA
DBSCAN-SWA_8 2338779 : 2348224 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_9 2556444 : 2634151 106 Enterobacteria_phage(33.33%) protease,tRNA,holin,terminase,plate,capsid,tail,integrase attL 2550827:2550843|attR 2604061:2604077
DBSCAN-SWA_10 2697801 : 2790909 101 Pseudomonas_phage(11.63%) protease,tRNA,holin,terminase,plate,head,capsid,tail,transposase NA
DBSCAN-SWA_11 2810396 : 2855644 55 Salmonella_phage(59.62%) terminase,integrase,holin,tail attL 2812234:2812249|attR 2852531:2852546
DBSCAN-SWA_12 2927017 : 3046352 111 Escherichia_phage(19.44%) protease,tRNA,tail,integrase,transposase attL 2917412:2917428|attR 3021925:3021941
DBSCAN-SWA_13 3089120 : 3096260 6 Escherichia_phage(83.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_011603
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 33148 : 86698 58 Wolbachia_phage(20.0%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage