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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_013016 Neisseria meningitidis alpha14, complete genome 7 crisprs cas2,cas1,cas9,cas3,WYL,DEDDh,DinG 9 1 3 0

Results visualization

1. NC_013016
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013016_1 367825-368001 orTypeII NA
2 spacers
cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013016_2 390918-391142 Orphan I-E
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013016_3 642873-643060 Orphan I-E
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013016_4 1402033-1402193 Orphan I-E
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013016_5 1990737-1990835 Orphan I-E
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013016_6 2116485-2116671 Orphan I-E
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013016_7 2143183-2143313 Orphan I-E
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_013016_2 2.3|391067|50|NC_013016|CRISPRCasFinder 391067-391116 50 NC_013016.1 391391-391440 0 1.0
NC_013016_2 2.3|391067|50|NC_013016|CRISPRCasFinder 391067-391116 50 NC_013016.1 1325841-1325890 0 1.0
NC_013016_2 2.3|391067|50|NC_013016|CRISPRCasFinder 391067-391116 50 NC_013016.1 1326359-1326408 0 1.0
NC_013016_2 2.3|391067|50|NC_013016|CRISPRCasFinder 391067-391116 50 NC_013016.1 1327137-1327186 0 1.0
NC_013016_2 2.3|391067|50|NC_013016|CRISPRCasFinder 391067-391116 50 NC_013016.1 1328687-1328736 0 1.0
NC_013016_2 2.3|391067|50|NC_013016|CRISPRCasFinder 391067-391116 50 NC_013016.1 1551732-1551781 0 1.0
NC_013016_3 3.1|642906|39|NC_013016|PILER-CR 642906-642944 39 NC_013016.1 642299-642337 0 1.0
NC_013016_3 3.1|642906|39|NC_013016|PILER-CR 642906-642944 39 NC_013016.1 642746-642784 0 1.0
NC_013016_3 3.1|642906|39|NC_013016|PILER-CR 642906-642944 39 NC_013016.1 643367-643405 0 1.0
NC_013016_3 3.1|642906|39|NC_013016|PILER-CR 642906-642944 39 NC_013016.1 1326101-1326139 0 1.0
NC_013016_4 4.1|1402063|50|NC_013016|PILER-CR 1402063-1402112 50 NC_013016.1 816179-816228 0 1.0
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 861402-861446 0 1.0
NC_013016_6 6.1|2116532|25|NC_013016|PILER-CR 2116532-2116556 25 NC_013016.1 2115247-2115271 0 1.0
NC_013016_7 7.1|2143215|23|NC_013016|PILER-CR 2143215-2143237 23 NC_013016.1 1325529-1325551 0 1.0
NC_013016_7 7.1|2143215|23|NC_013016|PILER-CR 2143215-2143237 23 NC_013016.1 1326047-1326069 0 1.0
NC_013016_7 7.1|2143215|23|NC_013016|PILER-CR 2143215-2143237 23 NC_013016.1 1327343-1327365 0 1.0
NC_013016_7 7.1|2143215|23|NC_013016|PILER-CR 2143215-2143237 23 NC_013016.1 1328893-1328915 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 116918-116944 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 476856-476882 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 642198-642224 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 642645-642671 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 643062-643088 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 643266-643292 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 643713-643739 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1325483-1325509 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1326000-1326026 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1326779-1326805 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1327296-1327322 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1328329-1328355 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1328846-1328872 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1370472-1370498 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1412914-1412940 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 2110986-2111012 0 1.0
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 2111484-2111510 0 1.0
NC_013016_3 3.1|642906|39|NC_013016|PILER-CR 642906-642944 39 NC_013016.1 1326879-1326917 1 0.974
NC_013016_3 3.1|642906|39|NC_013016|PILER-CR 642906-642944 39 NC_013016.1 1328429-1328467 1 0.974
NC_013016_4 4.1|1402063|50|NC_013016|PILER-CR 1402063-1402112 50 NC_013016.1 122604-122653 1 0.98
NC_013016_4 4.1|1402063|50|NC_013016|PILER-CR 1402063-1402112 50 NC_013016.1 1697519-1697568 1 0.98
NC_013016_4 4.1|1402063|50|NC_013016|PILER-CR 1402063-1402112 50 NC_013016.1 1705161-1705210 1 0.98
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 624814-624858 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 816724-816768 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 1401493-1401537 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 1698176-1698220 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 1699007-1699051 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 1707385-1707429 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 1723325-1723369 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 1723661-1723705 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 1723936-1723980 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 1724277-1724321 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 1724409-1724453 1 0.978
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 2145015-2145059 1 0.978
NC_013016_6 6.2|2116604|36|NC_013016|PILER-CR 2116604-2116639 36 NC_013016.1 2115304-2115339 1 0.972
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 117194-117220 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 117471-117497 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 187672-187698 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 210300-210326 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 210853-210879 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 211226-211252 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 258534-258560 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 258733-258759 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 259200-259226 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 260060-260086 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 260257-260283 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 2110641-2110667 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 2138401-2138427 1 0.963
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 2141579-2141605 1 0.963
NC_013016_3 3.1|642906|39|NC_013016|PILER-CR 642906-642944 39 NC_013016.1 122526-122564 2 0.949
NC_013016_3 3.1|642906|39|NC_013016|PILER-CR 642906-642944 39 NC_013016.1 816268-816306 2 0.949
NC_013016_3 3.1|642906|39|NC_013016|PILER-CR 642906-642944 39 NC_013016.1 1370518-1370556 2 0.949
NC_013016_4 4.2|1402143|45|NC_013016|PILER-CR 1402143-1402187 45 NC_013016.1 1707027-1707071 2 0.956
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 210254-210280 2 0.926
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 210576-210602 2 0.926
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 258124-258150 2 0.926
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 258323-258349 2 0.926
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1698648-1698674 2 0.926
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1699357-1699383 2 0.926
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1706092-1706118 2 0.926
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 1706747-1706773 2 0.926
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 2140854-2140880 2 0.926
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 NC_013016.1 2143469-2143495 2 0.926
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 1775092-1775164 13 0.822
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 2111192-2111264 13 0.822
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 183830-183902 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 187732-187804 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 201770-201842 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 216160-216232 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 220403-220475 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 807370-807442 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 807937-808009 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 808485-808557 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 809221-809293 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 915421-915493 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 1325632-1325704 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 1396868-1396940 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 1551362-1551434 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 1370567-1370639 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 2111619-2111691 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 2141640-2141712 14 0.808
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 35968-36040 15 0.795
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 642348-642420 15 0.795
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 643416-643488 15 0.795
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 1396269-1396341 15 0.795
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 1396568-1396640 15 0.795
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 1551196-1551268 15 0.795
NC_013016_3 3.2|642978|73|NC_013016|PILER-CR 642978-643050 73 NC_013016.1 2111347-2111419 15 0.795

1. spacer 2.3|391067|50|NC_013016|CRISPRCasFinder matches to position: 391391-391440, mismatch: 0, identity: 1.0

tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	CRISPR spacer
tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	Protospacer
**************************************************

2. spacer 2.3|391067|50|NC_013016|CRISPRCasFinder matches to position: 1325841-1325890, mismatch: 0, identity: 1.0

tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	CRISPR spacer
tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	Protospacer
**************************************************

3. spacer 2.3|391067|50|NC_013016|CRISPRCasFinder matches to position: 1326359-1326408, mismatch: 0, identity: 1.0

tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	CRISPR spacer
tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	Protospacer
**************************************************

4. spacer 2.3|391067|50|NC_013016|CRISPRCasFinder matches to position: 1327137-1327186, mismatch: 0, identity: 1.0

tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	CRISPR spacer
tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	Protospacer
**************************************************

5. spacer 2.3|391067|50|NC_013016|CRISPRCasFinder matches to position: 1328687-1328736, mismatch: 0, identity: 1.0

tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	CRISPR spacer
tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	Protospacer
**************************************************

6. spacer 2.3|391067|50|NC_013016|CRISPRCasFinder matches to position: 1551732-1551781, mismatch: 0, identity: 1.0

tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	CRISPR spacer
tagaatttcaatgcctcaagaatttatcggaaaaaaccaaaacccttccg	Protospacer
**************************************************

7. spacer 3.1|642906|39|NC_013016|PILER-CR matches to position: 642299-642337, mismatch: 0, identity: 1.0

tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	CRISPR spacer
tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	Protospacer
***************************************

8. spacer 3.1|642906|39|NC_013016|PILER-CR matches to position: 642746-642784, mismatch: 0, identity: 1.0

tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	CRISPR spacer
tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	Protospacer
***************************************

9. spacer 3.1|642906|39|NC_013016|PILER-CR matches to position: 643367-643405, mismatch: 0, identity: 1.0

tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	CRISPR spacer
tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	Protospacer
***************************************

10. spacer 3.1|642906|39|NC_013016|PILER-CR matches to position: 1326101-1326139, mismatch: 0, identity: 1.0

tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	CRISPR spacer
tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	Protospacer
***************************************

11. spacer 4.1|1402063|50|NC_013016|PILER-CR matches to position: 816179-816228, mismatch: 0, identity: 1.0

attcaatgctaaggcaatttatcggaaatgactgaaactcaaaaaactag	CRISPR spacer
attcaatgctaaggcaatttatcggaaatgactgaaactcaaaaaactag	Protospacer
**************************************************

12. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 861402-861446, mismatch: 0, identity: 1.0

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	Protospacer
*********************************************

13. spacer 6.1|2116532|25|NC_013016|PILER-CR matches to position: 2115247-2115271, mismatch: 0, identity: 1.0

acaacacggtttctttagattttac	CRISPR spacer
acaacacggtttctttagattttac	Protospacer
*************************

14. spacer 7.1|2143215|23|NC_013016|PILER-CR matches to position: 1325529-1325551, mismatch: 0, identity: 1.0

gacgcagggttaagaaaacctgc	CRISPR spacer
gacgcagggttaagaaaacctgc	Protospacer
***********************

15. spacer 7.1|2143215|23|NC_013016|PILER-CR matches to position: 1326047-1326069, mismatch: 0, identity: 1.0

gacgcagggttaagaaaacctgc	CRISPR spacer
gacgcagggttaagaaaacctgc	Protospacer
***********************

16. spacer 7.1|2143215|23|NC_013016|PILER-CR matches to position: 1327343-1327365, mismatch: 0, identity: 1.0

gacgcagggttaagaaaacctgc	CRISPR spacer
gacgcagggttaagaaaacctgc	Protospacer
***********************

17. spacer 7.1|2143215|23|NC_013016|PILER-CR matches to position: 1328893-1328915, mismatch: 0, identity: 1.0

gacgcagggttaagaaaacctgc	CRISPR spacer
gacgcagggttaagaaaacctgc	Protospacer
***********************

18. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 116918-116944, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

19. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 476856-476882, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

20. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 642198-642224, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

21. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 642645-642671, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

22. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 643062-643088, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

23. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 643266-643292, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

24. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 643713-643739, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

25. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1325483-1325509, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

26. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1326000-1326026, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

27. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1326779-1326805, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

28. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1327296-1327322, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

29. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1328329-1328355, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

30. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1328846-1328872, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

31. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1370472-1370498, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

32. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1412914-1412940, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

33. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 2110986-2111012, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

34. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 2111484-2111510, mismatch: 0, identity: 1.0

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaatcagaaacctaaa	Protospacer
***************************

35. spacer 3.1|642906|39|NC_013016|PILER-CR matches to position: 1326879-1326917, mismatch: 1, identity: 0.974

tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	CRISPR spacer
tgtggattcgtgggaatgacgcggtgcaggtttccgtac	Protospacer
*****.*********************************

36. spacer 3.1|642906|39|NC_013016|PILER-CR matches to position: 1328429-1328467, mismatch: 1, identity: 0.974

tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	CRISPR spacer
tgtggattcgtgggaatgacgcggtgcaggtttccgtac	Protospacer
*****.*********************************

37. spacer 4.1|1402063|50|NC_013016|PILER-CR matches to position: 122604-122653, mismatch: 1, identity: 0.98

attcaatgctaaggcaatttatcggaaatgactgaaactcaaaaaactag	CRISPR spacer
attcaatgctaaggcaatttctcggaaatgactgaaactcaaaaaactag	Protospacer
******************** *****************************

38. spacer 4.1|1402063|50|NC_013016|PILER-CR matches to position: 1697519-1697568, mismatch: 1, identity: 0.98

attcaatgctaaggcaatttatcggaaatgactgaaactcaaaaaactag	CRISPR spacer
attcaatgctaaggcaatttatcgggaatgactgaaactcaaaaaactag	Protospacer
*************************.************************

39. spacer 4.1|1402063|50|NC_013016|PILER-CR matches to position: 1705161-1705210, mismatch: 1, identity: 0.98

attcaatgctaaggcaatttatcggaaatgactgaaactcaaaaaactag	CRISPR spacer
attcaatgctaaggcaatttatcgggaatgactgaaactcaaaaaactag	Protospacer
*************************.************************

40. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 624814-624858, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
actttcgtgggaatgacgtggtgcaggtttccgtacggatggatt	Protospacer
***********************************.*********

41. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 816724-816768, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
actttcgtgggaatgacgtagtgcaggtttccgtatggatggatt	Protospacer
*******************.*************************

42. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 1401493-1401537, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
actttcgtgggaatgacgtggtgcaggtttccgtacggatggatt	Protospacer
***********************************.*********

43. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 1698176-1698220, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
actttcgtgggaatgacgtggtgcaggtttccgtacggatggatt	Protospacer
***********************************.*********

44. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 1699007-1699051, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
actttcgtggaaatgacgtggtgcaggtttccgtatggatggatt	Protospacer
**********.**********************************

45. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 1707385-1707429, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
actttcgtgggaatgacgtagtgcaggtttccgtatggatggatt	Protospacer
*******************.*************************

46. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 1723325-1723369, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
acttccgtgggaatgacgtggtgcaggtttccgtatggatggatt	Protospacer
****.****************************************

47. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 1723661-1723705, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
acttccgtgggaatgacgtggtgcaggtttccgtatggatggatt	Protospacer
****.****************************************

48. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 1723936-1723980, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
actttcgtgggaatgacgtggtgcaggttcccgtatggatggatt	Protospacer
*****************************.***************

49. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 1724277-1724321, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
acttccgtgggaatgacgtggtgcaggtttccgtatggatggatt	Protospacer
****.****************************************

50. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 1724409-1724453, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
acttccgtgggaatgacgtggtgcaggtttccgtatggatggatt	Protospacer
****.****************************************

51. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 2145015-2145059, mismatch: 1, identity: 0.978

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
actttcgtgggaatgacgtggtgcaggtttccgtacggatggatt	Protospacer
***********************************.*********

52. spacer 6.2|2116604|36|NC_013016|PILER-CR matches to position: 2115304-2115339, mismatch: 1, identity: 0.972

gtcttttataaactttgaatattgctgttatcccaa	CRISPR spacer
gtcttttataacctttgaatattgctgttatcccaa	Protospacer
*********** ************************

53. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 117194-117220, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccgaaatcagaaacctaaa	Protospacer
**********.****************

54. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 117471-117497, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccgaaatcagaaacctaaa	Protospacer
**********.****************

55. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 187672-187698, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctaaa	Protospacer
************** ************

56. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 210300-210326, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctaaa	Protospacer
************** ************

57. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 210853-210879, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaatcaaaatcagaaacctaaa	Protospacer
********.******************

58. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 211226-211252, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaatcaaaatcagaaacctaaa	Protospacer
********.******************

59. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 258534-258560, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctaaa	Protospacer
************** ************

60. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 258733-258759, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctaaa	Protospacer
************** ************

61. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 259200-259226, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctaaa	Protospacer
************** ************

62. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 260060-260086, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaagcagaaacctaaa	Protospacer
************** ************

63. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 260257-260283, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctaaa	Protospacer
************** ************

64. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 2110641-2110667, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctaaa	Protospacer
************** ************

65. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 2138401-2138427, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaataagaaacctaaa	Protospacer
*************** ***********

66. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 2141579-2141605, mismatch: 1, identity: 0.963

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaataagaaacctaaa	Protospacer
*************** ***********

67. spacer 3.1|642906|39|NC_013016|PILER-CR matches to position: 122526-122564, mismatch: 2, identity: 0.949

tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	CRISPR spacer
tgtaggttcgtgggaatgacgtggtgcaggtttccgtac	Protospacer
***.*****************.*****************

68. spacer 3.1|642906|39|NC_013016|PILER-CR matches to position: 816268-816306, mismatch: 2, identity: 0.949

tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	CRISPR spacer
tgtaggttcgtgggaatgacgtggtgcaggtttccgtac	Protospacer
***.*****************.*****************

69. spacer 3.1|642906|39|NC_013016|PILER-CR matches to position: 1370518-1370556, mismatch: 2, identity: 0.949

tgtgggttcgtgggaatgacgcggtgcaggtttccgtac	CRISPR spacer
tgtaggttcgtgggaatgacgtggtgcaggtttccgtac	Protospacer
***.*****************.*****************

70. spacer 4.2|1402143|45|NC_013016|PILER-CR matches to position: 1707027-1707071, mismatch: 2, identity: 0.956

actttcgtgggaatgacgtggtgcaggtttccgtatggatggatt	CRISPR spacer
actttcgtgggaatgacgggatgcaggtttccgtatggatggatt	Protospacer
****************** *.************************

71. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 210254-210280, mismatch: 2, identity: 0.926

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagcaacctaaa	Protospacer
************** *** ********

72. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 210576-210602, mismatch: 2, identity: 0.926

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacccaaa	Protospacer
************** ********.***

73. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 258124-258150, mismatch: 2, identity: 0.926

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaagccaaaaacagaaacctaaa	Protospacer
*******.****** ************

74. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 258323-258349, mismatch: 2, identity: 0.926

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctgaa	Protospacer
************** *********.**

75. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1698648-1698674, mismatch: 2, identity: 0.926

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctgaa	Protospacer
************** *********.**

76. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1699357-1699383, mismatch: 2, identity: 0.926

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctgaa	Protospacer
************** *********.**

77. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1706092-1706118, mismatch: 2, identity: 0.926

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctgaa	Protospacer
************** *********.**

78. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 1706747-1706773, mismatch: 2, identity: 0.926

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaaccaaaaacagaaacctgaa	Protospacer
************** *********.**

79. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 2140854-2140880, mismatch: 2, identity: 0.926

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaacccaaaacagaaacctaaa	Protospacer
********** *** ************

80. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to position: 2143469-2143495, mismatch: 2, identity: 0.926

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
acagaaaacccaaaacagaaacctaaa	Protospacer
********** *** ************

81. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 1775092-1775164, mismatch: 13, identity: 0.822

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************************************************

82. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 2111192-2111264, mismatch: 13, identity: 0.822

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************************************************

83. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 183830-183902, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

84. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 187732-187804, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

85. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 201770-201842, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

86. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 216160-216232, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

87. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 220403-220475, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

88. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 807370-807442, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

89. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 807937-808009, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

90. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 808485-808557, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

91. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 809221-809293, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

92. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 915421-915493, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

93. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 1325632-1325704, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

94. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 1396868-1396940, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcacgcgggaatccagaccttagaacaacagcaatattcaaagattatc	Protospacer
************** *********************************************

95. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 1551362-1551434, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

96. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 1370567-1370639, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

97. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 2111619-2111691, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

98. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 2141640-2141712, mismatch: 14, identity: 0.808

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************************.***********************************

99. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 35968-36040, mismatch: 15, identity: 0.795

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcacgcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************** *********.***********************************

100. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 642348-642420, mismatch: 15, identity: 0.795

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaaccacagcaatattcaaagattatc	Protospacer
************************.************ **********************

101. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 643416-643488, mismatch: 15, identity: 0.795

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttaaaacaacagcaatattcaaagattatc	Protospacer
************************.********.**************************

102. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 1396269-1396341, mismatch: 15, identity: 0.795

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcacgcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************** *********.***********************************

103. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 1396568-1396640, mismatch: 15, identity: 0.795

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcacgcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************** *********.***********************************

104. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 1551196-1551268, mismatch: 15, identity: 0.795

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgtaggcgggaatctagaccttagaacaacagcaatattcaaagattatc	Protospacer
************.***********.***********************************

105. spacer 3.2|642978|73|NC_013016|PILER-CR matches to position: 2111347-2111419, mismatch: 15, identity: 0.795

gtcattcccgcgcaggcgggaatccagaccttagaacaacagcaatattcaaagattatc	CRISPR spacer
gtcattcccgcgcaggcgggaatctagaccttagaacaacagtaatattcaaagattatc	Protospacer
************************.*****************.*****************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 MT774386 CrAssphage cr110_1, complete genome 50692-50718 6 0.778
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 KY971610 Pseudomonas phage PspYZU05, complete genome 121641-121667 6 0.778
NC_013016_7 7.2|2143270|27|NC_013016|PILER-CR 2143270-2143296 27 MT774383 CrAssphage cr11_1, complete genome 66913-66939 6 0.778

1. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to MT774386 (CrAssphage cr110_1, complete genome) position: , mismatch: 6, identity: 0.778

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
cttgaaaaccaaaatcagaaacttgag	Protospacer
 . *******************.*.*.

2. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.778

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
gagaaaaagcaaaatcaaaaacctaaa	Protospacer
. ..**** ********.*********

3. spacer 7.2|2143270|27|NC_013016|PILER-CR matches to MT774383 (CrAssphage cr11_1, complete genome) position: , mismatch: 6, identity: 0.778

acagaaaaccaaaatcagaaacctaaa	CRISPR spacer
cttgaaaaccaaaatcagaaacttgag	Protospacer
 . *******************.*.*.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 784178 : 898292 117 Neisseria_meningitidis_phage(15.38%) tRNA,tail,transposase,integrase,portal,capsid attL 803529:803588|attR 854456:854528
DBSCAN-SWA_2 912597 : 1000735 90 Burkholderia_phage(23.33%) tRNA,tail,transposase,integrase,plate attL 944011:944070|attR 1005520:1005609
DBSCAN-SWA_3 1165547 : 1173495 8 Streptococcus_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage