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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_013315 Clostridioides difficile CD196, complete genome 15 crisprs cas14j,WYL,cas3,DEDDh,DinG,csa3,cas14k,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2 0 45 8 0

Results visualization

1. NC_013315
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_1 144837-144915 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_2 716756-716898 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_3 999537-999614 TypeV NA
1 spacers
cas14j

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_4 1294727-1295680 Orphan I-A
14 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_5 1504069-1504821 Orphan I-A
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_6 1615439-1615732 Orphan I-A
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_7 1709876-1710232 Orphan I-A
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_8 1712097-1712387 Orphan I-A
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_9 1849663-1850878 Orphan I-A
18 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_10 2200187-2200869 Orphan NA:I-A
10 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_11 2660818-2660975 Unclear NA
2 spacers
cas3,cas5,cas7,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_12 2972867-2973192 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_13 3137064-3137275 TypeV NA
3 spacers
cas14j

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_14 3244496-3246042 Unclear I-A
23 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013315_15 3491430-3492052 Unclear NA
9 spacers
cas3,cas7,cas6,cas5

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_013315_1 1.1|144862|29|NC_013315|CRISPRCasFinder 144862-144890 29 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 5105-5133 0 1.0
NC_013315_2 2.1|716779|37|NC_013315|CRISPRCasFinder 716779-716815 37 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 49102-49138 0 1.0
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 MK473382 Clostridium phage JD032, complete genome 34305-34341 0 1.0
NC_013315_4 4.8|1295218|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295218-1295254 37 GU949551 Clostridium phage phiCD6356, complete genome 22302-22338 0 1.0
NC_013315_4 4.14|1295615|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295615-1295651 37 LN681539 Clostridium phage phiCD505, complete genome 47022-47058 0 1.0
NC_013315_4 4.14|1295615|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295615-1295651 37 NC_011398 Clostridium phage phiCD27, complete genome 46321-46357 0 1.0
NC_013315_4 4.14|1295615|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295615-1295651 37 NC_048642 Clostridium phage CDKM9, complete genome 47466-47502 0 1.0
NC_013315_5 5.7|1504495|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504495-1504531 37 HM568888 Clostridium phage phiCD38-2, complete genome 3348-3384 0 1.0
NC_013315_9 9.3|1849824|38|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1849824-1849861 38 GU949551 Clostridium phage phiCD6356, complete genome 4418-4455 0 1.0
NC_013315_9 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850287-1850323 37 NC_048665 Clostridium phage phiCDHM14, complete genome 32222-32258 0 1.0
NC_013315_9 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850287-1850323 37 JX145342 Clostridium phage phiMMP04, complete genome 31272-31308 0 1.0
NC_013315_9 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850287-1850323 37 NC_028838 Clostridium phage phiCD506, complete genome 35-71 0 1.0
NC_013315_9 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850287-1850323 37 HG796225 Clostridium phage phiCDHM13 complete genome 33172-33208 0 1.0
NC_013315_9 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850287-1850323 37 LN681538 Clostridium phage phiCD481-1, complete genome 58-94 0 1.0
NC_013315_10 10.14|2200471|38|NC_013315|CRISPRCasFinder 2200471-2200508 38 HM568888 Clostridium phage phiCD38-2, complete genome 723-760 0 1.0
NC_013315_10 10.22|2200472|38|NC_013315|PILER-CR 2200472-2200509 38 HM568888 Clostridium phage phiCD38-2, complete genome 723-760 0 1.0
NC_013315_14 14.9|3245051|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245051-3245086 36 MF547662 Clostridioides phage LIBA6276, complete genome 121180-121215 0 1.0
NC_013315_14 14.9|3245051|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245051-3245086 36 MF547663 Clostridioides phage LIBA2945, complete genome 119443-119478 0 1.0
NC_013315_14 14.10|3245116|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245116-3245152 37 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 2066-2102 0 1.0
NC_013315_14 14.10|3245116|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245116-3245152 37 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 119898-119934 0 1.0
NC_013315_14 14.10|3245116|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245116-3245152 37 LN681537 Clostridium phage phiCD211, complete genome 128760-128796 0 1.0
NC_013315_14 14.17|3245577|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245577-3245613 37 JX145341 Clostridium phage phiMMP02, complete genome 41433-41469 0 1.0
NC_013315_2 2.2|716839|37|NC_013315|CRISPRCasFinder 716839-716875 37 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 49042-49078 1 0.973
NC_013315_4 4.5|1295021|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295021-1295057 37 NC_028958 Clostridium phage phiCD146, complete genome 8007-8043 1 0.973
NC_013315_4 4.14|1295615|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295615-1295651 37 LN681542 Clostridium phage phiMMP03, complete genome 48822-48858 1 0.973
NC_013315_4 4.14|1295615|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295615-1295651 37 NC_009231 Clostridium phage phiC2, complete genome 52360-52396 1 0.973
NC_013315_5 5.5|1504361|38|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504361-1504398 38 KU057941 Clostridium phage CDSH1, complete genome 38647-38684 1 0.974
NC_013315_5 5.5|1504361|38|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504361-1504398 38 HM568888 Clostridium phage phiCD38-2, complete genome 38145-38182 1 0.974
NC_013315_5 5.5|1504361|38|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504361-1504398 38 LN881738 Escherichia phage slur17, complete genome 23372-23409 1 0.974
NC_013315_5 5.7|1504495|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504495-1504531 37 LN881738 Escherichia phage slur17, complete genome 17081-17117 1 0.973
NC_013315_5 5.7|1504495|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504495-1504531 37 KU057941 Clostridium phage CDSH1, complete genome 3320-3356 1 0.973
NC_013315_5 5.7|1504495|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504495-1504531 37 NC_028905 Clostridium phage phiCD111, complete genome 3348-3384 1 0.973
NC_013315_5 5.7|1504495|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504495-1504531 37 LN680009 Clostridium phage phiCDHS1 gp03 gene for putative portal capsid protein 1303-1339 1 0.973
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 GU949551 Clostridium phage phiCD6356, complete genome 36548-36583 1 0.972
NC_013315_10 10.5|2200471|39|NC_013315|CRT 2200471-2200509 39 HM568888 Clostridium phage phiCD38-2, complete genome 723-761 1 0.974
NC_013315_10 10.15|2200538|37|NC_013315|CRISPRCasFinder 2200538-2200574 37 LN681539 Clostridium phage phiCD505, complete genome 19142-19178 1 0.973
NC_013315_10 10.15|2200538|37|NC_013315|CRISPRCasFinder 2200538-2200574 37 JX145341 Clostridium phage phiMMP02, complete genome 19048-19084 1 0.973
NC_013315_10 10.15|2200538|37|NC_013315|CRISPRCasFinder 2200538-2200574 37 NC_048642 Clostridium phage CDKM9, complete genome 19080-19116 1 0.973
NC_013315_10 10.15|2200538|37|NC_013315|CRISPRCasFinder 2200538-2200574 37 KX228400 Clostridium phage CDKM15, complete genome 22285-22321 1 0.973
NC_013315_10 10.23|2200539|37|NC_013315|PILER-CR 2200539-2200575 37 LN681539 Clostridium phage phiCD505, complete genome 19142-19178 1 0.973
NC_013315_10 10.23|2200539|37|NC_013315|PILER-CR 2200539-2200575 37 JX145341 Clostridium phage phiMMP02, complete genome 19048-19084 1 0.973
NC_013315_10 10.23|2200539|37|NC_013315|PILER-CR 2200539-2200575 37 NC_048642 Clostridium phage CDKM9, complete genome 19080-19116 1 0.973
NC_013315_10 10.23|2200539|37|NC_013315|PILER-CR 2200539-2200575 37 KX228400 Clostridium phage CDKM15, complete genome 22285-22321 1 0.973
NC_013315_14 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245182-3245218 37 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 448-484 1 0.973
NC_013315_14 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245182-3245218 37 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 121516-121552 1 0.973
NC_013315_14 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245182-3245218 37 LN681537 Clostridium phage phiCD211, complete genome 130378-130414 1 0.973
NC_013315_15 15.2|3491524|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3491524-3491559 36 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 56560-56595 1 0.972
NC_013315_15 15.2|3491524|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3491524-3491559 36 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 118780-118815 1 0.972
NC_013315_15 15.2|3491524|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3491524-3491559 36 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 65405-65440 1 0.972
NC_013315_15 15.2|3491524|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3491524-3491559 36 LN681537 Clostridium phage phiCD211, complete genome 74267-74302 1 0.972
NC_013315_4 4.3|1294889|35|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294889-1294923 35 NC_011398 Clostridium phage phiCD27, complete genome 47316-47350 2 0.943
NC_013315_4 4.5|1295021|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295021-1295057 37 HM568888 Clostridium phage phiCD38-2, complete genome 7995-8031 2 0.946
NC_013315_5 5.3|1504229|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504229-1504264 36 NC_028838 Clostridium phage phiCD506, complete genome 25906-25941 2 0.944
NC_013315_9 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850287-1850323 37 NC_008226 Clostridioides difficile 630 plasmid pCD630, complete sequence 5142-5178 2 0.946
NC_013315_9 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850287-1850323 37 NZ_CP016319 Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence 163-199 2 0.946
NC_013315_10 10.6|2200538|38|NC_013315|CRT 2200538-2200575 38 LN681539 Clostridium phage phiCD505, complete genome 19142-19179 2 0.947
NC_013315_10 10.6|2200538|38|NC_013315|CRT 2200538-2200575 38 JX145341 Clostridium phage phiMMP02, complete genome 19048-19085 2 0.947
NC_013315_10 10.6|2200538|38|NC_013315|CRT 2200538-2200575 38 NC_048642 Clostridium phage CDKM9, complete genome 19080-19117 2 0.947
NC_013315_10 10.6|2200538|38|NC_013315|CRT 2200538-2200575 38 KX228400 Clostridium phage CDKM15, complete genome 22285-22322 2 0.947
NC_013315_10 10.14|2200471|38|NC_013315|CRISPRCasFinder 2200471-2200508 38 LN881738 Escherichia phage slur17, complete genome 19705-19742 2 0.947
NC_013315_10 10.14|2200471|38|NC_013315|CRISPRCasFinder 2200471-2200508 38 KU057941 Clostridium phage CDSH1, complete genome 695-732 2 0.947
NC_013315_10 10.14|2200471|38|NC_013315|CRISPRCasFinder 2200471-2200508 38 NC_028905 Clostridium phage phiCD111, complete genome 723-760 2 0.947
NC_013315_10 10.14|2200471|38|NC_013315|CRISPRCasFinder 2200471-2200508 38 NC_028958 Clostridium phage phiCD146, complete genome 728-765 2 0.947
NC_013315_10 10.15|2200538|37|NC_013315|CRISPRCasFinder 2200538-2200574 37 NC_011398 Clostridium phage phiCD27, complete genome 19163-19199 2 0.946
NC_013315_10 10.22|2200472|38|NC_013315|PILER-CR 2200472-2200509 38 LN881738 Escherichia phage slur17, complete genome 19705-19742 2 0.947
NC_013315_10 10.22|2200472|38|NC_013315|PILER-CR 2200472-2200509 38 KU057941 Clostridium phage CDSH1, complete genome 695-732 2 0.947
NC_013315_10 10.22|2200472|38|NC_013315|PILER-CR 2200472-2200509 38 NC_028905 Clostridium phage phiCD111, complete genome 723-760 2 0.947
NC_013315_10 10.22|2200472|38|NC_013315|PILER-CR 2200472-2200509 38 NC_028958 Clostridium phage phiCD146, complete genome 728-765 2 0.947
NC_013315_10 10.23|2200539|37|NC_013315|PILER-CR 2200539-2200575 37 NC_011398 Clostridium phage phiCD27, complete genome 19163-19199 2 0.946
NC_013315_14 14.7|3244919|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3244919-3244955 37 MF547662 Clostridioides phage LIBA6276, complete genome 123631-123667 2 0.946
NC_013315_14 14.7|3244919|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3244919-3244955 37 MF547663 Clostridioides phage LIBA2945, complete genome 121894-121930 2 0.946
NC_013315_14 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245182-3245218 37 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 43710-43746 2 0.946
NC_013315_14 14.21|3245847|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245847-3245882 36 GU949551 Clostridium phage phiCD6356, complete genome 12962-12997 2 0.944
NC_013315_15 15.5|3491723|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3491723-3491758 36 GU949551 Clostridium phage phiCD6356, complete genome 9291-9326 2 0.944
NC_013315_4 4.10|1295350|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295350-1295386 37 GU949551 Clostridium phage phiCD6356, complete genome 1435-1471 3 0.919
NC_013315_5 5.10|1504690|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504690-1504726 37 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 6906-6942 3 0.919
NC_013315_5 5.10|1504690|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504690-1504726 37 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 2228-2264 3 0.919
NC_013315_5 5.10|1504690|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504690-1504726 37 NZ_CP029156 Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence 40717-40753 3 0.919
NC_013315_5 5.10|1504690|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504690-1504726 37 NZ_CP029153 Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence 34761-34797 3 0.919
NC_013315_7 7.1|1709905|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1709905-1709940 36 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 17906-17941 3 0.917
NC_013315_9 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850287-1850323 37 NZ_MG266000 Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence 5148-5184 3 0.919
NC_013315_10 10.5|2200471|39|NC_013315|CRT 2200471-2200509 39 KU057941 Clostridium phage CDSH1, complete genome 695-733 3 0.923
NC_013315_10 10.5|2200471|39|NC_013315|CRT 2200471-2200509 39 NC_028905 Clostridium phage phiCD111, complete genome 723-761 3 0.923
NC_013315_10 10.5|2200471|39|NC_013315|CRT 2200471-2200509 39 NC_028958 Clostridium phage phiCD146, complete genome 728-766 3 0.923
NC_013315_10 10.5|2200471|39|NC_013315|CRT 2200471-2200509 39 LN881738 Escherichia phage slur17, complete genome 19704-19742 3 0.923
NC_013315_10 10.6|2200538|38|NC_013315|CRT 2200538-2200575 38 NC_011398 Clostridium phage phiCD27, complete genome 19163-19200 3 0.921
NC_013315_15 15.3|3491589|39|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3491589-3491627 39 JX145342 Clostridium phage phiMMP04, complete genome 7668-7706 3 0.923
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KC821618 Cellulophaga phage phi10:1, complete genome 1207-1236 4 0.867
NC_013315_5 5.3|1504229|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504229-1504264 36 JX145342 Clostridium phage phiMMP04, complete genome 23777-23812 4 0.889
NC_013315_9 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850287-1850323 37 MK473382 Clostridium phage JD032, complete genome 35069-35105 4 0.892
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP014419 Staphylococcus aureus strain USA300-SUR15 plasmid pUSA08-1-SUR15, complete sequence 14288-14317 4 0.867
NC_013315_13 13.3|3137225|25|NC_013315|CRISPRCasFinder 3137225-3137249 25 HQ634174 Cyanophage MED4-213, complete genome 98055-98079 4 0.84
NC_013315_13 13.3|3137225|25|NC_013315|CRISPRCasFinder 3137225-3137249 25 GU071101 Prochlorococcus phage P-HM1, complete genome 15695-15719 4 0.84
NC_013315_14 14.15|3245444|38|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245444-3245481 38 JX145341 Clostridium phage phiMMP02, complete genome 38170-38207 4 0.895
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP045692 Klebsiella pneumoniae strain TK421 plasmid pTK421_2, complete sequence 78485-78514 5 0.833
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP042421 Leuconostoc lactis strain CBA3622 plasmid unnamed1, complete sequence 41155-41184 5 0.833
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NC_010418 Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence 30253-30282 5 0.833
NC_013315_13 13.3|3137225|25|NC_013315|CRISPRCasFinder 3137225-3137249 25 MN694568 Marine virus AFVG_250M879, complete genome 12134-12158 5 0.8
NC_013315_1 1.1|144862|29|NC_013315|CRISPRCasFinder 144862-144890 29 KY971610 Pseudomonas phage PspYZU05, complete genome 134239-134267 6 0.793
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP009068 Borreliella afzelii K78 plasmid cp32-9, complete sequence 17310-17339 6 0.8
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP009069 Borreliella afzelii K78 plasmid cp32-4, complete sequence 17206-17235 6 0.8
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NC_015917 Borreliella bissettii DN127 plasmid lp28-4, complete sequence 20571-20600 6 0.8
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP015882 Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence 1306356-1306385 6 0.8
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP028837 Enterococcus faecalis strain FC plasmid unnamed2, complete sequence 72809-72838 6 0.8
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP030264 Ensifer adhaerens strain Corn53 plasmid AB, complete sequence 1114535-1114564 6 0.8
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP042215 Enterococcus faecalis strain L15 plasmid pL15-A, complete sequence 17519-17548 6 0.8
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 CP040041 Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence 30325-30354 6 0.8
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 NC_048665 Clostridium phage phiCDHM14, complete genome 338-374 6 0.838
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 NC_028838 Clostridium phage phiCD506, complete genome 798-834 6 0.838
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 HG796225 Clostridium phage phiCDHM13 complete genome 338-374 6 0.838
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 LN681538 Clostridium phage phiCD481-1, complete genome 821-857 6 0.838
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 HG798901 Clostridium phage phiCDHM11 complete genome 338-374 6 0.838
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 CP016195 Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-1, complete sequence 182637-182666 7 0.767
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MN693725 Marine virus AFVG_250M494, complete genome 7495-7524 7 0.767
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP017230 Campylobacter jejuni strain FORC_046 isolate Not reported plasmid pFORC46.1, complete sequence 20957-20986 7 0.767
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NC_017577 Shewanella baltica OS117 plasmid pSBAL11701, complete sequence 108731-108760 7 0.767
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_LR214986 Mycoplasma cynos strain NCTC10142 plasmid 13 357630-357659 7 0.767
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP014203 Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence 111331-111360 7 0.767
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NC_013357 Zymomonas mobilis subsp. mobilis NCIMB 11163 plasmid pZA1002, complete sequence 39380-39413 7 0.794
NC_013315_6 6.2|1615533|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1615533-1615569 37 MF417840 Uncultured Caudovirales phage clone 2AX_3, partial genome 5012-5048 7 0.811
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP007182 Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete sequence 32132-32161 7 0.767
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP007752 Campylobacter jejuni subsp. jejuni D42a plasmid pTet-D42a, complete sequence 38372-38401 7 0.767
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP017026 Campylobacter coli plasmid pCC14983A-1, complete sequence 111426-111455 7 0.767
NC_013315_13 13.1|3137090|31|NC_013315|CRISPRCasFinder 3137090-3137120 31 NC_019765 Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence 168164-168194 7 0.774
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP006906 Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence 75812-75841 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MN693547 Marine virus AFVG_25M424, complete genome 13091-13120 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MN693297 Marine virus AFVG_25M423, complete genome 9184-9213 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP006570 Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence 274006-274035 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 AP014396 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S46-C203, *** SEQUENCING IN PROGRESS *** 2835-2864 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MN693353 Marine virus AFVG_25M425, complete genome 17638-17667 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP028373 Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence 71028-71057 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP028373 Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence 72280-72309 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 AP022644 Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence 88412-88441 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_LR214999 Mycoplasma conjunctivae strain NCTC10147 plasmid 3 47192-47221 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 LR214965 Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11 36784-36813 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP014745 Campylobacter jejuni strain OD267 plasmid pCJDM67 L, complete sequence 113566-113595 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 CP024686 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence 34948-34977 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP014345 Campylobacter jejuni strain RM3194 plasmid unnamed, complete sequence 54090-54119 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP014345 Campylobacter jejuni strain RM3194 plasmid unnamed, complete sequence 55342-55371 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP014743 Campylobacter jejuni strain WP2202 plasmid pCJDM202, complete sequence 116226-116255 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP017417 Campylobacter jejuni strain MTVDSCj13 plasmid pMTVDSCj13-2, complete sequence 28139-28168 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_LR134420 Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 11 60920-60949 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP044174 Campylobacter jejuni strain AR-0412 plasmid pAR-0412, complete sequence 10352-10381 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MK448965 Streptococcus phage Javan506, complete genome 13313-13342 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NC_007581 Clostridium phage c-st, complete genome 13365-13394 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MK448959 Streptococcus phage Javan488, complete genome 13313-13342 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MK448686 Streptococcus phage Javan157, complete genome 12914-12943 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MK448949 Streptococcus phage Javan460, complete genome 13313-13342 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MK448951 Streptococcus phage Javan470, complete genome 12914-12943 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MK448676 Streptococcus phage Javan131, complete genome 14779-14808 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 AP008983 Clostridium phage c-st genomic DNA, complete genome 13365-13394 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP043762 Paenibacillus sp. 37 plasmid pART37, complete sequence 6554-6583 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP019232 Bacillus thuringiensis strain YGd22-03 plasmid pYGD36, complete sequence 3173-3202 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP010112 Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence 199881-199910 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP015730 Bacillus cereus strain A1 plasmid pBCA1, complete sequence 134417-134446 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 CP012553 Campylobacter sp. RM16192 plasmid p16192, complete sequence 15672-15701 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KY554775 Lactococcus phage AM11, complete genome 20566-20595 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KY554773 Lactococcus phage AM8, complete genome 20565-20594 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KY554768 Lactococcus phage AM1, complete genome 20565-20594 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KY554769 Lactococcus phage AM2, complete genome 20565-20594 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KY554770 Lactococcus phage AM3, complete genome 20567-20596 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MN694408 Marine virus AFVG_250M293, complete genome 5785-5814 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KY554776 Lactococcus phage AM12, complete genome 20547-20576 8 0.733
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KY554774 Lactococcus phage AM9, complete genome 20565-20594 8 0.733
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP014853 Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence 184073-184106 8 0.765
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP053953 Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence 159293-159326 8 0.765
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP053950 Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence 53540-53573 8 0.765
NC_013315_4 4.9|1295284|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295284-1295320 37 MN856006 Siphoviridae sp. isolate 29, complete genome 2302-2338 8 0.784
NC_013315_4 4.9|1295284|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295284-1295320 37 KU057941 Clostridium phage CDSH1, complete genome 41439-41475 8 0.784
NC_013315_4 4.9|1295284|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295284-1295320 37 LN881738 Escherichia phage slur17, complete genome 20581-20617 8 0.784
NC_013315_4 4.9|1295284|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295284-1295320 37 NC_028905 Clostridium phage phiCD111, complete genome 41408-41444 8 0.784
NC_013315_4 4.9|1295284|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295284-1295320 37 HM568888 Clostridium phage phiCD38-2, complete genome 40938-40974 8 0.784
NC_013315_5 5.3|1504229|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1504229-1504264 36 MK373783 Escherichia phage vB_EcoM_KWBSE43-6, complete genome 127068-127103 8 0.778
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_AP017932 Lactobacillus sakei strain LK-145 plasmid pLs145-a, complete sequence 32832-32867 8 0.778
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP028890 Borrelia turcica IST7 plasmid lp34, complete sequence 2064-2093 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP013278 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence 63045-63074 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NC_018509 Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence 56929-56958 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP051859 Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence 169573-169602 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP009347 Bacillus thuringiensis HD1002 plasmid 3, complete sequence 208329-208358 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP045025 Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence 63045-63074 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NC_011246 Borrelia recurrentis A1 plasmid pl124, complete sequence 62585-62614 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NC_011247 Borrelia duttonii Ly plasmid pl165, complete sequence 100909-100938 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP053971 Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence 12401-12430 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP039724 Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence 70260-70289 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NC_014633 Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence 857477-857506 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 KT184312 Enterobacteria phage Kha5h, complete genome 74683-74712 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 NZ_CP017832 Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence 52593-52622 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 MN895437 Escherichia phage teqskov, complete genome 133993-134022 8 0.733
NC_013315_10 10.1|2200215|30|NC_013315|CRT 2200215-2200244 30 MN994497 Phage NBEco003, complete genome 117256-117285 8 0.733
NC_013315_10 10.13|2200405|37|NC_013315|CRISPRCasFinder 2200405-2200441 37 NZ_CP034684 Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence 35137-35173 8 0.784
NC_013315_10 10.21|2200406|37|NC_013315|PILER-CR 2200406-2200442 37 NZ_CP034684 Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence 35137-35173 8 0.784
NC_013315_2 2.2|716839|37|NC_013315|CRISPRCasFinder 716839-716875 37 NC_022879 Enterococcus mundtii QU 25 plasmid pQY182, complete sequence 9006-9042 9 0.757
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP004877 Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence 64826-64855 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP004860 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence 85077-85106 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP011156 Bacillus cereus strain HN001 plasmid pRML01, complete sequence 234555-234584 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP010090 Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB426, complete sequence 68597-68626 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 AP013426 Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57-MedDCM-OCT-S27-C24 23413-23442 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KJ535721 Listeria phage List-36, complete genome 131839-131868 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP014283 Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence 430237-430266 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP033461 Brevibacillus laterosporus strain 1821L plasmid p1821L01, complete sequence 7252-7281 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP011350 Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence 190785-190814 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP032614 Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence 119421-119450 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP007616 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence 293348-293377 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NC_002253 Buchnera aphidicola str. APS (Acyrthosiphon pisum) plasmid pLeu, complete sequence 2039-2068 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP023246 Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence 252793-252822 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP048772 Campylobacter jejuni strain ZS007 plasmid pCJ145K, complete sequence 129793-129822 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP048772 Campylobacter jejuni strain ZS007 plasmid pCJ145K, complete sequence 131046-131075 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 MN172529 Listeria phage LP-039, complete genome 130877-130906 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 DQ003638 Listeria phage A511, complete genome 132156-132185 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KJ591604 Listeria phage LMTA-148, complete genome 7271-7300 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KJ094033 Listeria phage LP-048, complete genome 305-334 9 0.7
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 JQ797329 Listeria phage vB_LmoM_AG20, complete genome 130913-130942 9 0.7
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP038617 Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence 74655-74688 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NC_012577 Bacillus anthracis str. CDC 684 plasmid pX02, complete sequence 73434-73467 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_AP018445 Bacillus anthracis strain CZC5 plasmid pXO2, complete sequence 74990-75023 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP006744 Bacillus anthracis str. SVA11 plasmid pXO2, complete sequence 74950-74983 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NC_017727 Bacillus anthracis str. H9401 plasmid BAP2, complete sequence 75004-75037 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP009462 Bacillus anthracis strain SK-102 plasmid pXO2, complete sequence 7723-7756 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP009326 Bacillus anthracis strain Vollum 1B plasmid 2, complete sequence 54288-54321 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 MH542234 Staphylococcus phage Terranova, complete genome 32909-32942 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 MH321491 Staphylococcus phage Twillingate, complete genome 33428-33461 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP014283 Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence 556003-556036 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP032614 Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence 245187-245220 9 0.735
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 MN871490 UNVERIFIED: Salmonella phage SEzh_1, complete genome 44341-44374 9 0.735
NC_013315_8 8.7|1712325|33|NC_013315|CRISPRCasFinder 1712325-1712357 33 NZ_CP053838 Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence 73614-73646 9 0.727
NC_013315_8 8.7|1712325|33|NC_013315|CRISPRCasFinder 1712325-1712357 33 NZ_CP032824 Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence 2020-2052 9 0.727
NC_013315_8 8.7|1712325|33|NC_013315|CRISPRCasFinder 1712325-1712357 33 NZ_MK715471 Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence 60841-60873 9 0.727
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_LN890332 Leuconostoc gelidum subsp. gasicomitatum KG16-1 isolate LEKG1 plasmid II, complete sequence 19456-19491 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP032750 Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed6, complete sequence 11726-11761 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP042398 Leuconostoc citreum strain CBA3623 plasmid unnamed5, complete sequence 10132-10167 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP042376 Leuconostoc carnosum strain CBA3620 plasmid unnamed2, complete sequence 27080-27115 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP042400 Weissella hellenica strain CBA3632 plasmid unnamed1, complete sequence 36943-36978 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP014612 Leuconostoc mesenteroides subsp. jonggajibkimchii strain DRC1506 plasmid pDRC1, complete sequence 7827-7862 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP017200 Leuconostoc gelidum subsp. gasicomitatum strain TMW 2.1619 plasmid pL21619-3, complete genome 7159-7194 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP042384 Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed1, complete sequence 11740-11775 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP012874 Weissella cibaria strain CH2 plasmid pMKC01, complete sequence 15401-15436 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP012876 Weissella cibaria strain CH2 plasmid pMKC03, complete sequence 6103-6138 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP012876 Weissella cibaria strain CH2 plasmid pMKC03, complete sequence 13134-13169 9 0.75
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP012876 Weissella cibaria strain CH2 plasmid pMKC03, complete sequence 20165-20200 9 0.75
NC_013315_10 10.4|2200405|38|NC_013315|CRT 2200405-2200442 38 NZ_CP034684 Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence 35136-35173 9 0.763
NC_013315_10 10.13|2200405|37|NC_013315|CRISPRCasFinder 2200405-2200441 37 NZ_CP009691 Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence 294136-294172 9 0.757
NC_013315_10 10.21|2200406|37|NC_013315|PILER-CR 2200406-2200442 37 NZ_CP009691 Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence 294136-294172 9 0.757
NC_013315_14 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245182-3245218 37 NZ_CP033246 Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence 212802-212838 9 0.757
NC_013315_14 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR 3245182-3245218 37 NZ_CP033248 Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence 212842-212878 9 0.757
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 KJ018210 Flavobacterium sp. phage 1/32, complete genome 7455-7484 10 0.667
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 MF288922 Bacillus phage Janet, complete genome 40501-40537 10 0.73
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 MH538296 Bacillus phage Maceta, complete genome 36442-36478 10 0.73
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 NC_024216 Bacillus phage CAM003, complete genome 40425-40461 10 0.73
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 KJ489400 Bacillus phage Hoody T, complete genome 40245-40281 10 0.73
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 MF288921 Bacillus phage OTooleKemple52, complete genome 39856-39892 10 0.73
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 MH638310 Bacillus phage Kamfam, complete genome 39856-39892 10 0.73
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 MK215646 Bacillus phage vB_BthM-Goe5, complete genome 38291-38327 10 0.73
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 KU737346 Bacillus phage Vinny, complete genome 40763-40799 10 0.73
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 NC_024207 Bacillus phage Evoli, complete genome 40158-40194 10 0.73
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 MF498901 Bacillus phage Anthony, complete genome 40764-40800 10 0.73
NC_013315_4 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1294756-1294792 37 NC_018856 Bacillus phage Bastille, complete genome 14410-14446 10 0.73
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NC_011655 Bacillus cereus AH187 plasmid pAH187_270, complete sequence 211572-211605 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_LR215033 Mycoplasma gallopavonis strain NCTC10186 plasmid 3 18706-18739 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP015507 Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence 324084-324117 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NC_010924 Bacillus cereus strain AH187 plasmid pCER270, complete sequence 267981-268014 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 MN693105 Marine virus AFVG_25M79, complete genome 33974-34007 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 KY554775 Lactococcus phage AM11, complete genome 45977-46010 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 KY554773 Lactococcus phage AM8, complete genome 45976-46009 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 KY554768 Lactococcus phage AM1, complete genome 46208-46241 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 KY554769 Lactococcus phage AM2, complete genome 46201-46234 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 KU057941 Clostridium phage CDSH1, complete genome 34307-34340 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 KY554770 Lactococcus phage AM3, complete genome 46578-46611 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 LN881738 Escherichia phage slur17, complete genome 27716-27749 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 KY554776 Lactococcus phage AM12, complete genome 45958-45991 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 KY554774 Lactococcus phage AM9, complete genome 45975-46008 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP004866 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB7921, complete sequence 5227-5260 10 0.706
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP009542 Bacillus anthracis strain BA1015 plasmid pXO2, complete sequence 54338-54371 10 0.706
NC_013315_8 8.7|1712325|33|NC_013315|CRISPRCasFinder 1712325-1712357 33 AP019525 Tenacibaculum phage PTm5 DNA, complete genome 76997-77029 10 0.697
NC_013315_8 8.7|1712325|33|NC_013315|CRISPRCasFinder 1712325-1712357 33 AP019524 Tenacibaculum phage PTm1 DNA, complete genome 77006-77038 10 0.697
NC_013315_9 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850222-1850257 36 NZ_CP033609 Weissella hellenica strain 0916-4-2 plasmid pWHSP041, complete sequence 30210-30245 10 0.722
NC_013315_9 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1850287-1850323 37 HG798901 Clostridium phage phiCDHM11 complete genome 31575-31611 10 0.73
NC_013315_10 10.4|2200405|38|NC_013315|CRT 2200405-2200442 38 NZ_CP009691 Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence 294136-294173 10 0.737
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP053290 Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence 40718-40751 11 0.676
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP029455 Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence 161754-161787 11 0.676
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NC_005707 Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence 124705-124738 11 0.676
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 CP045776 Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence 260406-260439 11 0.676
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NC_016792 Bacillus cereus NC7401 plasmid pNCcld, complete sequence 266850-266883 11 0.676
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 AP013659 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S34-C213, *** SEQUENCING IN PROGRESS *** 1354-1387 11 0.676
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 MN694638 Marine virus AFVG_250M1093, complete genome 452-485 12 0.647
NC_013315_4 4.13|1295549|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295549-1295585 37 NZ_CP024773 Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence 122227-122263 12 0.676
NC_013315_4 4.13|1295549|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295549-1295585 37 NZ_CP041075 Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence 49110-49146 12 0.676
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 MT774377 CrAssphage cr107_1, complete genome 300-333 13 0.618
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 LR794151 Bacteriophage APSE-7 strain HaDrplatanoidis-3702 genome assembly, chromosome: 1 17413-17446 13 0.618
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 MK504442 Lactobacillus phage 3-SAC12, complete genome 37723-37756 13 0.618
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP020746 Bacillus mycoides strain Gnyt1 plasmid unnamed3, complete sequence 72615-72648 14 0.588
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP050055 Pseudomonas aeruginosa strain LIUYANG-A plasmid unnamed2, complete sequence 4713-4746 14 0.588
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 MN694330 Marine virus AFVG_250M1134, complete genome 561-594 14 0.588
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 MH892354 Streptococcus phage SW3, complete genome 24328-24361 14 0.588
NC_013315_4 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT 1295155-1295188 34 NZ_CP009698 Bacillus anthracis strain BA1035 plasmid pXO2, complete sequence 72203-72236 15 0.559
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP011156 Bacillus cereus strain HN001 plasmid pRML01, complete sequence 429045-429074 16 0.467
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP040783 Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence 410674-410703 16 0.467
NC_013315_3 3.1|999561|30|NC_013315|CRISPRCasFinder 999561-999590 30 NZ_CP014283 Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence 141205-141234 16 0.467

1. spacer 1.1|144862|29|NC_013315|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tgtaataagttaaagcaatatgaatcaac	Protospacer
*****************************

2. spacer 2.1|716779|37|NC_013315|CRISPRCasFinder matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 0, identity: 1.0

aacaggtcttataacatttgaagataatcattactat	CRISPR spacer
aacaggtcttataacatttgaagataatcattactat	Protospacer
*************************************

3. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
tctccatctccaattaacataaataattcatccgctg	Protospacer
*************************************

4. spacer 4.8|1295218|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

ttataaactcccacgacaaaattaactataacctcgt	CRISPR spacer
ttataaactcccacgacaaaattaactataacctcgt	Protospacer
*************************************

5. spacer 4.14|1295615|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

cttttaagtgcatcaaaggagttacaagctatattta	CRISPR spacer
cttttaagtgcatcaaaggagttacaagctatattta	Protospacer
*************************************

6. spacer 4.14|1295615|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

cttttaagtgcatcaaaggagttacaagctatattta	CRISPR spacer
cttttaagtgcatcaaaggagttacaagctatattta	Protospacer
*************************************

7. spacer 4.14|1295615|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

cttttaagtgcatcaaaggagttacaagctatattta	CRISPR spacer
cttttaagtgcatcaaaggagttacaagctatattta	Protospacer
*************************************

8. spacer 5.7|1504495|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

gaattatatattatgaaaaaatatggagtcacagagg	CRISPR spacer
gaattatatattatgaaaaaatatggagtcacagagg	Protospacer
*************************************

9. spacer 9.3|1849824|38|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

aggtcaagcatagattttgcaactggaagataagaaga	CRISPR spacer
aggtcaagcatagattttgcaactggaagataagaaga	Protospacer
**************************************

10. spacer 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 0, identity: 1.0

atgtccccacatcaattttcctccgcatgaaaaaatc	CRISPR spacer
atgtccccacatcaattttcctccgcatgaaaaaatc	Protospacer
*************************************

11. spacer 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

atgtccccacatcaattttcctccgcatgaaaaaatc	CRISPR spacer
atgtccccacatcaattttcctccgcatgaaaaaatc	Protospacer
*************************************

12. spacer 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

atgtccccacatcaattttcctccgcatgaaaaaatc	CRISPR spacer
atgtccccacatcaattttcctccgcatgaaaaaatc	Protospacer
*************************************

13. spacer 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 0, identity: 1.0

atgtccccacatcaattttcctccgcatgaaaaaatc	CRISPR spacer
atgtccccacatcaattttcctccgcatgaaaaaatc	Protospacer
*************************************

14. spacer 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 0, identity: 1.0

atgtccccacatcaattttcctccgcatgaaaaaatc	CRISPR spacer
atgtccccacatcaattttcctccgcatgaaaaaatc	Protospacer
*************************************

15. spacer 10.14|2200471|38|NC_013315|CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

atggcagtaactaagaagaaaactataccttttttatt	CRISPR spacer
atggcagtaactaagaagaaaactataccttttttatt	Protospacer
**************************************

16. spacer 10.22|2200472|38|NC_013315|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

atggcagtaactaagaagaaaactataccttttttatt	CRISPR spacer
atggcagtaactaagaagaaaactataccttttttatt	Protospacer
**************************************

17. spacer 14.9|3245051|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

taatttagttatatccatttgtttaacccaattagt	CRISPR spacer
taatttagttatatccatttgtttaacccaattagt	Protospacer
************************************

18. spacer 14.9|3245051|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

taatttagttatatccatttgtttaacccaattagt	CRISPR spacer
taatttagttatatccatttgtttaacccaattagt	Protospacer
************************************

19. spacer 14.10|3245116|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcattttgcactatatcaagcttagtatacaatg	CRISPR spacer
gtttcattttgcactatatcaagcttagtatacaatg	Protospacer
*************************************

20. spacer 14.10|3245116|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcattttgcactatatcaagcttagtatacaatg	CRISPR spacer
gtttcattttgcactatatcaagcttagtatacaatg	Protospacer
*************************************

21. spacer 14.10|3245116|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

gtttcattttgcactatatcaagcttagtatacaatg	CRISPR spacer
gtttcattttgcactatatcaagcttagtatacaatg	Protospacer
*************************************

22. spacer 14.17|3245577|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

gtaaaatgagaaataaaagtaaacaaaaaggtttagt	CRISPR spacer
gtaaaatgagaaataaaagtaaacaaaaaggtttagt	Protospacer
*************************************

23. spacer 2.2|716839|37|NC_013315|CRISPRCasFinder matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 1, identity: 0.973

atatggttatctaaatatagaagataagacgttctac	CRISPR spacer
atatggttatctaaatatagaagataagatgttctac	Protospacer
*****************************.*******

24. spacer 4.5|1295021|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.973

tttataaatcttttaatgactgtctctgatggtacag	CRISPR spacer
tttataaatcttttaatgactgtctctgatggaacag	Protospacer
******************************** ****

25. spacer 4.14|1295615|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.973

cttttaagtgcatcaaaggagttacaagctatattta	CRISPR spacer
cttttaagtgcatcaaaggagttacaggctatattta	Protospacer
**************************.**********

26. spacer 4.14|1295615|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.973

cttttaagtgcatcaaaggagttacaagctatattta	CRISPR spacer
cttttaagtgcatcaaaggagttacaggctatattta	Protospacer
**************************.**********

27. spacer 5.5|1504361|38|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.974

ttttaagcaggtgattaaatgattaaaaaagtagaaaa	CRISPR spacer
ttttaagtaggtgattaaatgattaaaaaagtagaaaa	Protospacer
*******.******************************

28. spacer 5.5|1504361|38|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.974

ttttaagcaggtgattaaatgattaaaaaagtagaaaa	CRISPR spacer
ttttaagtaggtgattaaatgattaaaaaagtagaaaa	Protospacer
*******.******************************

29. spacer 5.5|1504361|38|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.974

ttttaagcaggtgattaaatgattaaaaaagtagaaaa	CRISPR spacer
ttttaagtaggtgattaaatgattaaaaaagtagaaaa	Protospacer
*******.******************************

30. spacer 5.7|1504495|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.973

gaattatatattatgaaaaaatatggagtcacagagg	CRISPR spacer
gaattgtatattatgaaaaaatatggagtcacagagg	Protospacer
*****.*******************************

31. spacer 5.7|1504495|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.973

gaattatatattatgaaaaaatatggagtcacagagg	CRISPR spacer
gaattgtatattatgaaaaaatatggagtcacagagg	Protospacer
*****.*******************************

32. spacer 5.7|1504495|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.973

gaattatatattatgaaaaaatatggagtcacagagg	CRISPR spacer
gaattgtatattatgaaaaaatatggagtcacagagg	Protospacer
*****.*******************************

33. spacer 5.7|1504495|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to LN680009 (Clostridium phage phiCDHS1 gp03 gene for putative portal capsid protein) position: , mismatch: 1, identity: 0.973

gaattatatattatgaaaaaatatggagtcacagagg	CRISPR spacer
gaattgtatattatgaaaaaatatggagtcacagagg	Protospacer
*****.*******************************

34. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.972

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
aaagttttacgcattgtatgtgtgcctagattatct	Protospacer
********.***************************

35. spacer 10.5|2200471|39|NC_013315|CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.974

atggcagtaactaagaagaaaactataccttttttattc	CRISPR spacer
atggcagtaactaagaagaaaactataccttttttattt	Protospacer
**************************************.

36. spacer 10.15|2200538|37|NC_013315|CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.973

gaggaaattttatactaatgactgatgctagatttaa	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaa	Protospacer
************** **********************

37. spacer 10.15|2200538|37|NC_013315|CRISPRCasFinder matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 1, identity: 0.973

gaggaaattttatactaatgactgatgctagatttaa	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaa	Protospacer
************** **********************

38. spacer 10.15|2200538|37|NC_013315|CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.973

gaggaaattttatactaatgactgatgctagatttaa	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaa	Protospacer
************** **********************

39. spacer 10.15|2200538|37|NC_013315|CRISPRCasFinder matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 1, identity: 0.973

gaggaaattttatactaatgactgatgctagatttaa	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaa	Protospacer
************** **********************

40. spacer 10.23|2200539|37|NC_013315|PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.973

gaggaaattttatactaatgactgatgctagatttaa	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaa	Protospacer
************** **********************

41. spacer 10.23|2200539|37|NC_013315|PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 1, identity: 0.973

gaggaaattttatactaatgactgatgctagatttaa	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaa	Protospacer
************** **********************

42. spacer 10.23|2200539|37|NC_013315|PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.973

gaggaaattttatactaatgactgatgctagatttaa	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaa	Protospacer
************** **********************

43. spacer 10.23|2200539|37|NC_013315|PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 1, identity: 0.973

gaggaaattttatactaatgactgatgctagatttaa	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaa	Protospacer
************** **********************

44. spacer 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.973

ttttatatttaattttaaagattaaaggtataaacaa	CRISPR spacer
ttttatatttaattttaaagattaaaggtataaacat	Protospacer
************************************ 

45. spacer 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 1, identity: 0.973

ttttatatttaattttaaagattaaaggtataaacaa	CRISPR spacer
ttttatatttaattttaaagattaaaggtataaacat	Protospacer
************************************ 

46. spacer 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 1, identity: 0.973

ttttatatttaattttaaagattaaaggtataaacaa	CRISPR spacer
ttttatatttaattttaaagattaaaggtataaacat	Protospacer
************************************ 

47. spacer 15.2|3491524|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.972

ctctctactaaaattacttccacatatagctacaga	CRISPR spacer
ctctctactaaaattactcccacatatagctacaga	Protospacer
******************.*****************

48. spacer 15.2|3491524|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

ctctctactaaaattacttccacatatagctacaga	CRISPR spacer
ctctctactaaaattactcccacatatagctacaga	Protospacer
******************.*****************

49. spacer 15.2|3491524|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 1, identity: 0.972

ctctctactaaaattacttccacatatagctacaga	CRISPR spacer
ctctctactaaaattactcccacatatagctacaga	Protospacer
******************.*****************

50. spacer 15.2|3491524|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 1, identity: 0.972

ctctctactaaaattacttccacatatagctacaga	CRISPR spacer
ctctctactaaaattactcccacatatagctacaga	Protospacer
******************.*****************

51. spacer 4.3|1294889|35|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.943

aaaataaaagagtttgaattacccattttttcatg	CRISPR spacer
aagataaaggagtttgaattacccattttttcatg	Protospacer
**.*****.**************************

52. spacer 4.5|1295021|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.946

tttataaatcttttaatgactgtctctgatggtacag	CRISPR spacer
tttataaatcttttaatgactgtttctgatggaacag	Protospacer
***********************.******** ****

53. spacer 5.3|1504229|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 2, identity: 0.944

acgaaattagagtttgaaatatatgactacataata	CRISPR spacer
acgaaactagaatttgaaatatatgactacataata	Protospacer
******.****.************************

54. spacer 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_008226 (Clostridioides difficile 630 plasmid pCD630, complete sequence) position: , mismatch: 2, identity: 0.946

atgtccccacatcaattttcctccgcatgaaaaaatc	CRISPR spacer
atgtccccacatcaattttcctccgaatgaaaaaatg	Protospacer
************************* ********** 

55. spacer 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016319 (Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence) position: , mismatch: 2, identity: 0.946

atgtccccacatcaattttcctccgcatgaaaaaatc	CRISPR spacer
atgtccccacatcaattttcctccgaatgaaaaaatg	Protospacer
************************* ********** 

56. spacer 10.6|2200538|38|NC_013315|CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.947

gaggaaattttatactaatgactgatgctagatttaac	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaat	Protospacer
************** **********************.

57. spacer 10.6|2200538|38|NC_013315|CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 2, identity: 0.947

gaggaaattttatactaatgactgatgctagatttaac	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaat	Protospacer
************** **********************.

58. spacer 10.6|2200538|38|NC_013315|CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 2, identity: 0.947

gaggaaattttatactaatgactgatgctagatttaac	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaat	Protospacer
************** **********************.

59. spacer 10.6|2200538|38|NC_013315|CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 2, identity: 0.947

gaggaaattttatactaatgactgatgctagatttaac	CRISPR spacer
gaggaaattttataataatgactgatgctagatttaat	Protospacer
************** **********************.

60. spacer 10.14|2200471|38|NC_013315|CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.947

atggcagtaactaagaagaaaactataccttttttatt	CRISPR spacer
atggcagtaactaagaagaaaactataccttttcgatt	Protospacer
*********************************. ***

61. spacer 10.14|2200471|38|NC_013315|CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.947

atggcagtaactaagaagaaaactataccttttttatt	CRISPR spacer
atggcagtaactaagaagaaaactataccttttcgatt	Protospacer
*********************************. ***

62. spacer 10.14|2200471|38|NC_013315|CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.947

atggcagtaactaagaagaaaactataccttttttatt	CRISPR spacer
atggcagtaactaagaagaaaactataccttttcaatt	Protospacer
*********************************. ***

63. spacer 10.14|2200471|38|NC_013315|CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.947

atggcagtaactaagaagaaaactataccttttttatt	CRISPR spacer
atggcagtaactaagaagaaaactataccttttaaatt	Protospacer
*********************************  ***

64. spacer 10.15|2200538|37|NC_013315|CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.946

gaggaaattttatactaatgactgatgctagatttaa	CRISPR spacer
gaggaagttttatacaaatgactgatgctagatttaa	Protospacer
******.******** *********************

65. spacer 10.22|2200472|38|NC_013315|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.947

atggcagtaactaagaagaaaactataccttttttatt	CRISPR spacer
atggcagtaactaagaagaaaactataccttttcgatt	Protospacer
*********************************. ***

66. spacer 10.22|2200472|38|NC_013315|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.947

atggcagtaactaagaagaaaactataccttttttatt	CRISPR spacer
atggcagtaactaagaagaaaactataccttttcgatt	Protospacer
*********************************. ***

67. spacer 10.22|2200472|38|NC_013315|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.947

atggcagtaactaagaagaaaactataccttttttatt	CRISPR spacer
atggcagtaactaagaagaaaactataccttttcaatt	Protospacer
*********************************. ***

68. spacer 10.22|2200472|38|NC_013315|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.947

atggcagtaactaagaagaaaactataccttttttatt	CRISPR spacer
atggcagtaactaagaagaaaactataccttttaaatt	Protospacer
*********************************  ***

69. spacer 10.23|2200539|37|NC_013315|PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.946

gaggaaattttatactaatgactgatgctagatttaa	CRISPR spacer
gaggaagttttatacaaatgactgatgctagatttaa	Protospacer
******.******** *********************

70. spacer 14.7|3244919|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.946

agttagtgatatcaatatgctaagcaatatttttaca	CRISPR spacer
agctagtgatatcaatatgataagcaatatttttaca	Protospacer
**.**************** *****************

71. spacer 14.7|3244919|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 2, identity: 0.946

agttagtgatatcaatatgctaagcaatatttttaca	CRISPR spacer
agctagtgatatcaatatgataagcaatatttttaca	Protospacer
**.**************** *****************

72. spacer 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

ttttatatttaattttaaagattaaaggtataaacaa	CRISPR spacer
ttttatatttaattttaaagattaaaggtataaatat	Protospacer
**********************************.* 

73. spacer 14.21|3245847|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 2, identity: 0.944

gtataaaaaaagagttagaagcattagacaaatgga	CRISPR spacer
gtataaaaaaagagttagaagcattagatagatgga	Protospacer
****************************.*.*****

74. spacer 15.5|3491723|36|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 2, identity: 0.944

tgggatggattttgaagcttctatgtcaaatgtaca	CRISPR spacer
tggaatggattttgaagcatctatgtcaaatgtaca	Protospacer
***.************** *****************

75. spacer 4.10|1295350|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 3, identity: 0.919

gcagaagatttagcgactgttgttgctgaatgggatg	CRISPR spacer
gcgcaaaatttagcgactgttgttgctgaatgggatg	Protospacer
**. **.******************************

76. spacer 5.10|1504690|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.919

tcgaatgtgaatggcacttctatttctccaacttttg	CRISPR spacer
tcaaatgtgaatggtacttctatttctccaactttcg	Protospacer
**.***********.********************.*

77. spacer 5.10|1504690|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.919

tcgaatgtgaatggcacttctatttctccaacttttg	CRISPR spacer
tcaaatgtgaatggtacttctatttctccaactttcg	Protospacer
**.***********.********************.*

78. spacer 5.10|1504690|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.919

tcgaatgtgaatggcacttctatttctccaacttttg	CRISPR spacer
tcaaatgtgaatggtacttctatttctccaactttcg	Protospacer
**.***********.********************.*

79. spacer 5.10|1504690|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.919

tcgaatgtgaatggcacttctatttctccaacttttg	CRISPR spacer
tcaaatgtgaatggtacttctatttctccaactttcg	Protospacer
**.***********.********************.*

80. spacer 7.1|1709905|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.917

gttgtaagaagtatcattctattttttaatctttct	CRISPR spacer
attggaggaagtatcattctattttttaatctttct	Protospacer
.*** *.*****************************

81. spacer 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG266000 (Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence) position: , mismatch: 3, identity: 0.919

atgtccccacatcaattttcctccgcatgaaaaaatc	CRISPR spacer
atgcccccacatcaattttcctccgaatgaaaaaatg	Protospacer
***.********************* ********** 

82. spacer 10.5|2200471|39|NC_013315|CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.923

atggcagtaactaagaagaaaactataccttttttattc	CRISPR spacer
atggcagtaactaagaagaaaactataccttttcgattt	Protospacer
*********************************. ***.

83. spacer 10.5|2200471|39|NC_013315|CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.923

atggcagtaactaagaagaaaactataccttttttattc	CRISPR spacer
atggcagtaactaagaagaaaactataccttttcaattt	Protospacer
*********************************. ***.

84. spacer 10.5|2200471|39|NC_013315|CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 3, identity: 0.923

atggcagtaactaagaagaaaactataccttttttattc	CRISPR spacer
atggcagtaactaagaagaaaactataccttttaaattt	Protospacer
*********************************  ***.

85. spacer 10.5|2200471|39|NC_013315|CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.923

atggcagtaactaagaagaaaactataccttttttattc	CRISPR spacer
atggcagtaactaagaagaaaactataccttttcgattt	Protospacer
*********************************. ***.

86. spacer 10.6|2200538|38|NC_013315|CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.921

gaggaaattttatactaatgactgatgctagatttaac	CRISPR spacer
gaggaagttttatacaaatgactgatgctagatttaat	Protospacer
******.******** *********************.

87. spacer 15.3|3491589|39|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 3, identity: 0.923

tgtacctgggtcttttatcttacttgtaagtgtacttct	CRISPR spacer
tgtaccagggtcttttatcttacttgtaagtgtgcttcg	Protospacer
****** **************************.**** 

88. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KC821618 (Cellulophaga phage phi10:1, complete genome) position: , mismatch: 4, identity: 0.867

ctaagtt-ttaaaaaaattaatataaacaac	CRISPR spacer
-taatttatttaaaaaactaatataaacaac	Protospacer
 *** ** ** ******.*************

89. spacer 5.3|1504229|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 4, identity: 0.889

acgaaattagagtttgaaatatatgactacataata	CRISPR spacer
agtaaattagaatttgaaatctatgactacataata	Protospacer
*  ********.******** ***************

90. spacer 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 4, identity: 0.892

atgtccccacatcaattttcctccgcatgaaaaaatc	CRISPR spacer
atgtccccacctcaattttcctccgcacgaaaaaaat	Protospacer
********** ****************.******* .

91. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP014419 (Staphylococcus aureus strain USA300-SUR15 plasmid pUSA08-1-SUR15, complete sequence) position: , mismatch: 4, identity: 0.867

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
aaatcaatctttatttaataacaaaaaact	Protospacer
.* ****************** ******* 

92. spacer 13.3|3137225|25|NC_013315|CRISPRCasFinder matches to HQ634174 (Cyanophage MED4-213, complete genome) position: , mismatch: 4, identity: 0.84

tactattggttcatctgtatttggc	CRISPR spacer
tgctattggtgcatctgtatttgaa	Protospacer
*.******** ************. 

93. spacer 13.3|3137225|25|NC_013315|CRISPRCasFinder matches to GU071101 (Prochlorococcus phage P-HM1, complete genome) position: , mismatch: 4, identity: 0.84

tactattggttcatctgtatttggc	CRISPR spacer
tgctattggtgcatctgtatttgaa	Protospacer
*.******** ************. 

94. spacer 14.15|3245444|38|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 4, identity: 0.895

aggttaaaaagcaatataaaagattgcatggaattact	CRISPR spacer
aaattaaaaagcaatataaaagactgtatggaattact	Protospacer
*..********************.**.***********

95. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP045692 (Klebsiella pneumoniae strain TK421 plasmid pTK421_2, complete sequence) position: , mismatch: 5, identity: 0.833

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tttagttttaaaaaaagtaataaaaacaaa	Protospacer
.* ************* ***** ****** 

96. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP042421 (Leuconostoc lactis strain CBA3622 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

ctaagt--tttaaaaaaattaatataaacaac	CRISPR spacer
--aactcgtttaaaaaaattaatataaataaa	Protospacer
  ** *  ********************.** 

97. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 5, identity: 0.833

ctaagttttaaaaaaattaa-tataaacaac	CRISPR spacer
ctaagttctaaaaaaattaattatgatcga-	Protospacer
*******.************ ***.* *.* 

98. spacer 13.3|3137225|25|NC_013315|CRISPRCasFinder matches to MN694568 (Marine virus AFVG_250M879, complete genome) position: , mismatch: 5, identity: 0.8

tactattggttcatctgtatttggc	CRISPR spacer
tcaatttggttcatctgtatttggt	Protospacer
*    *******************.

99. spacer 1.1|144862|29|NC_013315|CRISPRCasFinder matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.793

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tacgataagttacagcaatacgaatcatc	Protospacer
*...******** *******.****** *

100. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP009068 (Borreliella afzelii K78 plasmid cp32-9, complete sequence) position: , mismatch: 6, identity: 0.8

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gacacttttaagaaaaataatataaacaac	Protospacer
   * ******.**** *************

101. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP009069 (Borreliella afzelii K78 plasmid cp32-4, complete sequence) position: , mismatch: 6, identity: 0.8

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gacacttttaagaaaaataatataaacaac	Protospacer
   * ******.**** *************

102. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NC_015917 (Borreliella bissettii DN127 plasmid lp28-4, complete sequence) position: , mismatch: 6, identity: 0.8

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
taatgatttaaaaaatttaatagaaacaac	Protospacer
. * * ********* ****** *******

103. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 6, identity: 0.8

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gtgcgctttaaaagaattaatgtaaacaac	Protospacer
 *. *.*******.*******.********

104. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP028837 (Enterococcus faecalis strain FC plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
caaacttttaaaaaaattaatttaaaaatt	Protospacer
* ** **************** **** * .

105. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 6, identity: 0.8

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gtgcgctttaaaagaattaatgtaaacaac	Protospacer
 *. *.*******.*******.********

106. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP042215 (Enterococcus faecalis strain L15 plasmid pL15-A, complete sequence) position: , mismatch: 6, identity: 0.8

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
caaacttttaaaaaaattaatttaaaaatt	Protospacer
* ** **************** **** * .

107. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to CP040041 (Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

---ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
accgtaa---ttaaaaaaattaataggaacaac	Protospacer
    ***   *************** .******

108. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 6, identity: 0.838

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
tcattgtctgcaattaacataaataattcatctgctg	Protospacer
** ...*** **********************.****

109. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 6, identity: 0.838

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
tcattgtctgcaattaacataaataattcatctgctg	Protospacer
** ...*** **********************.****

110. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 6, identity: 0.838

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
tcattgtctgcaattaacataaataattcatctgctg	Protospacer
** ...*** **********************.****

111. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 6, identity: 0.838

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
tcattgtctgcaattaacataaataattcatctgctg	Protospacer
** ...*** **********************.****

112. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 6, identity: 0.838

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
tcattgtctgcaattaacataaataattcatctgctg	Protospacer
** ...*** **********************.****

113. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to CP016195 (Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-1, complete sequence) position: , mismatch: 7, identity: 0.767

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
taaaattttaaaaaaattaatataataata	Protospacer
. **.********************  *  

114. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MN693725 (Marine virus AFVG_250M494, complete genome) position: , mismatch: 7, identity: 0.767

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tttttttttaaaaaaattaaaacaaacaaa	Protospacer
.*   *************** *.****** 

115. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP017230 (Campylobacter jejuni strain FORC_046 isolate Not reported plasmid pFORC46.1, complete sequence) position: , mismatch: 7, identity: 0.767

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
ttagattttaaaaaaattaatatgaaaatt	Protospacer
.**..******************.** * .

116. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NC_017577 (Shewanella baltica OS117 plasmid pSBAL11701, complete sequence) position: , mismatch: 7, identity: 0.767

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gaaaagtttaaaaaaataaataaaaacaaa	Protospacer
  **. *********** **** ****** 

117. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.767

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aaaagtttttaaaaaattcatataataaat	Protospacer
  ******* ******** ******  **.

118. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP014203 (Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence) position: , mismatch: 7, identity: 0.767

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
ctttaattttaaataattaatataaacaaa	Protospacer
**  . *** *** *************** 

119. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_013357 (Zymomonas mobilis subsp. mobilis NCIMB 11163 plasmid pZA1002, complete sequence) position: , mismatch: 7, identity: 0.794

-gggtctgactttaatatatatatatatataaatt	CRISPR spacer
agcatctaa-tttaataaatatatatatttaaatg	Protospacer
 * .***.* ******* ********** ***** 

120. spacer 6.2|1615533|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MF417840 (Uncultured Caudovirales phage clone 2AX_3, partial genome) position: , mismatch: 7, identity: 0.811

tttagcaaatttttcgtaaaagtcactattttcaatg	CRISPR spacer
ttgaaaaaattttacgtaaaagtaactattttcaact	Protospacer
** *. ******* ********* ***********. 

121. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP007182 (Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete sequence) position: , mismatch: 7, identity: 0.767

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
tatttttactttatttaaaaagaaaaaaca	Protospacer
 *.*.   ********** ***********

122. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP007752 (Campylobacter jejuni subsp. jejuni D42a plasmid pTet-D42a, complete sequence) position: , mismatch: 7, identity: 0.767

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
tatttttactttatttaaaaagaaaaaaca	Protospacer
 *.*.   ********** ***********

123. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP017026 (Campylobacter coli plasmid pCC14983A-1, complete sequence) position: , mismatch: 7, identity: 0.767

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
tatttttactttatttaaaaagaaaaaaca	Protospacer
 *.*.   ********** ***********

124. spacer 13.1|3137090|31|NC_013315|CRISPRCasFinder matches to NC_019765 (Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence) position: , mismatch: 7, identity: 0.774

caatatctctggtattggaggatttattata	CRISPR spacer
ctatgcctctggtattaaaggatttattact	Protospacer
* **..**********..***********. 

125. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP006906 (Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tactattttaaccaaattaatataaacaat	Protospacer
.   .******  ****************.

126. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MN693547 (Marine virus AFVG_25M424, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aaaagtttaaaaaaaaataatataaatttt	Protospacer
  ****** ******* *********.  .

127. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MN693297 (Marine virus AFVG_25M423, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aaaagtttaaaaaaaaataatataaatttt	Protospacer
  ****** ******* *********.  .

128. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP006570 (Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gattgttttaaaaaaaataatataaaatat	Protospacer
    ************ *********  *.

129. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to AP014396 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S46-C203, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aaaagtttaaaaaaaaataatataaattta	Protospacer
  ****** ******* *********.   

130. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MN693353 (Marine virus AFVG_25M425, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aaaagtttaaaaaaaaataatataaatttt	Protospacer
  ****** ******* *********.  .

131. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP028373 (Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cggttttttaaaaaaactaatataaatata	Protospacer
* .  ***********.*********.*  

132. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP028373 (Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cggttttttaaaaaaactaatataaatata	Protospacer
* .  ***********.*********.*  

133. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to AP022644 (Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tcacattttaaaaaaattaataaaaaaaca	Protospacer
..* .***************** *** *  

134. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
atttattttaaaaaaattaatacaaaaatt	Protospacer
 *  .*****************.*** * .

135. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
atttattttaaaaaaattaatacaaaaatt	Protospacer
 *  .*****************.*** * .

136. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP014745 (Campylobacter jejuni strain OD267 plasmid pCJDM67 L, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cggttttttaaaaaaactaatataaatata	Protospacer
* .  ***********.*********.*  

137. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to CP024686 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tcacattttaaaaaaattaataaaaaaaca	Protospacer
..* .***************** *** *  

138. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP014345 (Campylobacter jejuni strain RM3194 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cggttttttaaaaaaactaatataaatata	Protospacer
* .  ***********.*********.*  

139. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP014345 (Campylobacter jejuni strain RM3194 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cggttttttaaaaaaactaatataaatata	Protospacer
* .  ***********.*********.*  

140. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP014743 (Campylobacter jejuni strain WP2202 plasmid pCJDM202, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cggttttttaaaaaaactaatataaatata	Protospacer
* .  ***********.*********.*  

141. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP017417 (Campylobacter jejuni strain MTVDSCj13 plasmid pMTVDSCj13-2, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cggttttttaaaaaaactaatataaatata	Protospacer
* .  ***********.*********.*  

142. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_LR134420 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 11) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
ctaacttttaaaaaaattagtatcgccgcg	Protospacer
**** **************.*** . *.  

143. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP044174 (Campylobacter jejuni strain AR-0412 plasmid pAR-0412, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cggttttttaaaaaaactaatataaaatat	Protospacer
* .  ***********.*********  *.

144. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cacttgttcaaaaaaattaatataatcaat	Protospacer
*     **.**************** ***.

145. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NC_007581 (Clostridium phage c-st, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aagaataagaaaaaaattaatataaccaac	Protospacer
  .*.*   **************** ****

146. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cacttgttcaaaaaaattaatataatcaat	Protospacer
*     **.**************** ***.

147. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cactcgttcaaaaaaattaatataatcaat	Protospacer
*     **.**************** ***.

148. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cacttgttcaaaaaaattaatataatcaat	Protospacer
*     **.**************** ***.

149. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cactcgttcaaaaaaattaatataatcaat	Protospacer
*     **.**************** ***.

150. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
cactcgttcaaaaaaattaatataatcaat	Protospacer
*     **.**************** ***.

151. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to AP008983 (Clostridium phage c-st genomic DNA, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aagaataagaaaaaaattaatataaccaac	Protospacer
  .*.*   **************** ****

152. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP043762 (Paenibacillus sp. 37 plasmid pART37, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tcgggattcaaaaaaattaatataaccaag	Protospacer
....* **.**************** *** 

153. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP019232 (Bacillus thuringiensis strain YGd22-03 plasmid pYGD36, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gaaagttttaaaaaaatcattataataata	Protospacer
  ***************.* *****  *  

154. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP010112 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tcacattttaaaaaaattaataaaaaaaca	Protospacer
..* .***************** *** *  

155. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP015730 (Bacillus cereus strain A1 plasmid pBCA1, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tcacattttaaaaaaattaataaaaaaaca	Protospacer
..* .***************** *** *  

156. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to CP012553 (Campylobacter sp. RM16192 plasmid p16192, complete sequence) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tttgattttaaaaaaattaatgtaaaaatt	Protospacer
.* ..****************.**** * .

157. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KY554775 (Lactococcus phage AM11, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aggaaatttaaaaacattaatataaataaa	Protospacer
  .*. ******** ***********.** 

158. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KY554773 (Lactococcus phage AM8, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aggaaatttaaaaacattaatataaataaa	Protospacer
  .*. ******** ***********.** 

159. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KY554768 (Lactococcus phage AM1, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aggaaatttaaaaacattaatataaataaa	Protospacer
  .*. ******** ***********.** 

160. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KY554769 (Lactococcus phage AM2, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aggaaatttaaaaacattaatataaataaa	Protospacer
  .*. ******** ***********.** 

161. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KY554770 (Lactococcus phage AM3, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aggaaatttaaaaacattaatataaataaa	Protospacer
  .*. ******** ***********.** 

162. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MN694408 (Marine virus AFVG_250M293, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aatagtttaaaaaaaattaatagaaaatgc	Protospacer
   ***** ************* ***  .*

163. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KY554776 (Lactococcus phage AM12, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aggaaatttaaaaacattaatataaataaa	Protospacer
  .*. ******** ***********.** 

164. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KY554774 (Lactococcus phage AM9, complete genome) position: , mismatch: 8, identity: 0.733

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aggaaatttaaaaacattaatataaataaa	Protospacer
  .*. ******** ***********.** 

165. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014853 (Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence) position: , mismatch: 8, identity: 0.765

gggtctgact-------ttaatatatatatatatataaatt	CRISPR spacer
-------actatataaattaatatatatatatatatatatt	Protospacer
       ***       ******************** ***

166. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
cactctttatttaatataaatatatatatagatt	Protospacer
 . ***   ********* ***********.***

167. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
cactctttatttaatataaatatatatatagatt	Protospacer
 . ***   ********* ***********.***

168. spacer 4.9|1295284|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MN856006 (Siphoviridae sp. isolate 29, complete genome) position: , mismatch: 8, identity: 0.784

agttttaaagagggcagacctaaaaaatatactaaaa	CRISPR spacer
aactttaaagaaggcagacctaaaaaatataccgtct	Protospacer
*..********.********************..   

169. spacer 4.9|1295284|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 8, identity: 0.784

agttttaaagagggcagacctaaaaaatatactaaaa	CRISPR spacer
aatttccgggaaggtagacctaaaaaatatactaaga	Protospacer
*.***. ..**.**.********************.*

170. spacer 4.9|1295284|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 8, identity: 0.784

agttttaaagagggcagacctaaaaaatatactaaaa	CRISPR spacer
aatttccgggaaggtagacctaaaaaatatactaaga	Protospacer
*.***. ..**.**.********************.*

171. spacer 4.9|1295284|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 8, identity: 0.784

agttttaaagagggcagacctaaaaaatatactaaaa	CRISPR spacer
aatttccgggaaggtagacctaaaaaatatactaaga	Protospacer
*.***. ..**.**.********************.*

172. spacer 4.9|1295284|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 8, identity: 0.784

agttttaaagagggcagacctaaaaaatatactaaaa	CRISPR spacer
aatttccgggaaggtagacctaaaaaatatactaaga	Protospacer
*.***. ..**.**.********************.*

173. spacer 5.3|1504229|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MK373783 (Escherichia phage vB_EcoM_KWBSE43-6, complete genome) position: , mismatch: 8, identity: 0.778

acgaaattagagtttgaaatatatgactacataata	CRISPR spacer
agggcttcagagtttgaaatatttgagtacataaaa	Protospacer
* *.  *.************** *** ******* *

174. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017932 (Lactobacillus sakei strain LK-145 plasmid pLs145-a, complete sequence) position: , mismatch: 8, identity: 0.778

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
ccggttttacgcatggtatgtgtgcctagatagttt	Protospacer
  .*****.***** **************** .*.*

175. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP028890 (Borrelia turcica IST7 plasmid lp34, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
ggtcttatctttatttaaaaagaaaaaaag	Protospacer
*.... ************ ********* .

176. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
ccatcaatctttattaagtaagaaaaagat	Protospacer
   ************ *.*********.  

177. spacer 10.1|2200215|30|NC_013315|CRT matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
ccatcaatctttattaagtaagaaaaagat	Protospacer
   ************ *.*********.  

178. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
ccatcaatctttattaagtaagaaaaagat	Protospacer
   ************ *.*********.  

179. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
ccatcaatctttattaagtaagaaaaagat	Protospacer
   ************ *.*********.  

180. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
ccatcaatctttattaagtaagaaaaagat	Protospacer
   ************ *.*********.  

181. spacer 10.1|2200215|30|NC_013315|CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
ttatcaatcttaatttcataagaaaaattg	Protospacer
   ******** **** ********** ..

182. spacer 10.1|2200215|30|NC_013315|CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
ttatcaatcttaatttcataagaaaaattg	Protospacer
   ******** **** ********** ..

183. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
ccatcaatctttattaagtaagaaaaagat	Protospacer
   ************ *.*********.  

184. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
ccatcaatctttattaagtaagaaaaagat	Protospacer
   ************ *.*********.  

185. spacer 10.1|2200215|30|NC_013315|CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
aagataatctttattaaatcagaaaaaaat	Protospacer
.*  .********** *** ********  

186. spacer 10.1|2200215|30|NC_013315|CRT matches to KT184312 (Enterobacteria phage Kha5h, complete genome) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
aattaaatctttagttaataagaaaatgat	Protospacer
.*.* ******** ************ .  

187. spacer 10.1|2200215|30|NC_013315|CRT matches to NZ_CP017832 (Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
aaagaaatctatatttaataagaagaaagt	Protospacer
.*   ***** *************.***  

188. spacer 10.1|2200215|30|NC_013315|CRT matches to MN895437 (Escherichia phage teqskov, complete genome) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
aattaaatctttagttaataagaaaatgat	Protospacer
.*.* ******** ************ .  

189. spacer 10.1|2200215|30|NC_013315|CRT matches to MN994497 (Phage NBEco003, complete genome) position: , mismatch: 8, identity: 0.733

gactcaatctttatttaataagaaaaaaca	CRISPR spacer
aattaaatctttagttaataagaaaatgat	Protospacer
.*.* ******** ************ .  

190. spacer 10.13|2200405|37|NC_013315|CRISPRCasFinder matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 8, identity: 0.784

tttctgtatattttagttgtgttttaatattataaca	CRISPR spacer
attctgaatattttggttgtgttttaatatatagtca	Protospacer
 ***** *******.***************   . **

191. spacer 10.21|2200406|37|NC_013315|PILER-CR matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 8, identity: 0.784

tttctgtatattttagttgtgttttaatattataaca	CRISPR spacer
attctgaatattttggttgtgttttaatatatagtca	Protospacer
 ***** *******.***************   . **

192. spacer 2.2|716839|37|NC_013315|CRISPRCasFinder matches to NC_022879 (Enterococcus mundtii QU 25 plasmid pQY182, complete sequence) position: , mismatch: 9, identity: 0.757

atatggttatctaaatatagaagataagacgttctac	CRISPR spacer
aagtggttatctagatatagaaggtaagacgtcaagt	Protospacer
* .**********.*********.********.  ..

193. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP004877 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
taatattttaaaaaaattcatataaaattt	Protospacer
. * .************* *******   .

194. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP004860 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
taatattttaaaaaaattcatataaaattt	Protospacer
. * .************* *******   .

195. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
atttattttaaaaatattaatataaatgga	Protospacer
 *  .********* ***********... 

196. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP010090 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB426, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
taatattttaaaaaaattcatataaaattt	Protospacer
. * .************* *******   .

197. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to AP013426 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57-MedDCM-OCT-S27-C24) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tcttttgttaaaaaaattaatatgaacaga	Protospacer
..   * ****************.****. 

198. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gatagtaataaaaaaattaatataaagtgt	Protospacer
   ***  ******************  ..

199. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
atttattttaaaaatattaatataaatgga	Protospacer
 *  .********* ***********... 

200. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP033461 (Brevibacillus laterosporus strain 1821L plasmid p1821L01, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
taaagttttaaaaacattaatagaaggtct	Protospacer
. ************ ******* **.   .

201. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
taatattttaaaaaaattcatataaaattt	Protospacer
. * .************* *******   .

202. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
atttattttaaaaatattaatataaatgga	Protospacer
 *  .********* ***********... 

203. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP007616 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
taatattttaaaaaaattcatataaaattt	Protospacer
. * .************* *******   .

204. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NC_002253 (Buchnera aphidicola str. APS (Acyrthosiphon pisum) plasmid pLeu, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tttttttttaaaaaaactaatataaaagta	Protospacer
.*   ***********.********* .  

205. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
taatattttaaaaaaattcatataaaattt	Protospacer
. * .************* *******   .

206. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP048772 (Campylobacter jejuni strain ZS007 plasmid pCJ145K, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
ggtttttttaaaaaaactaatataaatata	Protospacer
     ***********.*********.*  

207. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP048772 (Campylobacter jejuni strain ZS007 plasmid pCJ145K, complete sequence) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
ggtttttttaaaaaaactaatataaatata	Protospacer
     ***********.*********.*  

208. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gatagtaataaaaaaattaatataaagtgt	Protospacer
   ***  ******************  ..

209. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gatagtaataaaaaaattaatataaagtgt	Protospacer
   ***  ******************  ..

210. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gatagtaataaaaaaattaatataaagtgt	Protospacer
   ***  ******************  ..

211. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gatagtaataaaaaaattaatataaagtgt	Protospacer
   ***  ******************  ..

212. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 9, identity: 0.7

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
gatagtaataaaaaaattaatataaagtgt	Protospacer
   ***  ******************  ..

213. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038617 (Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence) position: , mismatch: 9, identity: 0.735

gggtctgac----tttaatatatatatatatataaatt	CRISPR spacer
----ataatattatttaatatatatatatatatatata	Protospacer
     *.*.    ********************* ** 

214. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_012577 (Bacillus anthracis str. CDC 684 plasmid pX02, complete sequence) position: , mismatch: 9, identity: 0.735

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
cttttttcttttgatatatatatatatataattt	Protospacer
   *.*  .***.****************** **

215. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018445 (Bacillus anthracis strain CZC5 plasmid pXO2, complete sequence) position: , mismatch: 9, identity: 0.735

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
cttttttcttttgatatatatatatatataattt	Protospacer
   *.*  .***.****************** **

216. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006744 (Bacillus anthracis str. SVA11 plasmid pXO2, complete sequence) position: , mismatch: 9, identity: 0.735

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
cttttttcttttgatatatatatatatataattt	Protospacer
   *.*  .***.****************** **

217. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_017727 (Bacillus anthracis str. H9401 plasmid BAP2, complete sequence) position: , mismatch: 9, identity: 0.735

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
cttttttcttttgatatatatatatatataattt	Protospacer
   *.*  .***.****************** **

218. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009462 (Bacillus anthracis strain SK-102 plasmid pXO2, complete sequence) position: , mismatch: 9, identity: 0.735

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
cttttttcttttgatatatatatatatataattt	Protospacer
   *.*  .***.****************** **

219. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009326 (Bacillus anthracis strain Vollum 1B plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.735

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
cttttttcttttgatatatatatatatataattt	Protospacer
   *.*  .***.****************** **

220. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MH542234 (Staphylococcus phage Terranova, complete genome) position: , mismatch: 9, identity: 0.735

gggtctgact-----ttaatatatatatatatataaatt	CRISPR spacer
-----ttattaataattaatatatataaatatatatatt	Protospacer
     * *.*     ************ ******* ***

221. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MH321491 (Staphylococcus phage Twillingate, complete genome) position: , mismatch: 9, identity: 0.735

gggtctgact-----ttaatatatatatatatataaatt	CRISPR spacer
-----ttattaataattaatatatataaatatatatatt	Protospacer
     * *.*     ************ ******* ***

222. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 9, identity: 0.735

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
agcttaaaatttaatataaatatatatatatata	Protospacer
.* *. .* ********* *********** ** 

223. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 9, identity: 0.735

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
agcttaaaatttaatataaatatatatatatata	Protospacer
.* *. .* ********* *********** ** 

224. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MN871490 (UNVERIFIED: Salmonella phage SEzh_1, complete genome) position: , mismatch: 9, identity: 0.735

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
cggataaatattaatatatatatatataataatt	Protospacer
 ** . .*. ******************  ****

225. spacer 8.7|1712325|33|NC_013315|CRISPRCasFinder matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 9, identity: 0.727

acttatttacagctttatttgctaaatcagaag	CRISPR spacer
gaacatttaaagctttatttgctaaatctaatt	Protospacer
.  .***** ****************** .*  

226. spacer 8.7|1712325|33|NC_013315|CRISPRCasFinder matches to NZ_CP032824 (Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence) position: , mismatch: 9, identity: 0.727

acttatttacagctttatttgctaaatcagaag	CRISPR spacer
gaacatttaaagctttatttgctaaatctaatc	Protospacer
.  .***** ****************** .*  

227. spacer 8.7|1712325|33|NC_013315|CRISPRCasFinder matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 9, identity: 0.727

acttatttacagctttatttgctaaatcagaag	CRISPR spacer
gaacatttaaagctttatttgctaaatccaatc	Protospacer
.  .***** ****************** .*  

228. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN890332 (Leuconostoc gelidum subsp. gasicomitatum KG16-1 isolate LEKG1 plasmid II, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatggtatgtgtgcctagatagttg	Protospacer
   *****.***** **************** .*. 

229. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032750 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatcgtatgtgtgcctagatagttg	Protospacer
   *****.*****.**************** .*. 

230. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042398 (Leuconostoc citreum strain CBA3623 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatggtatgtgtgcctagatagttg	Protospacer
   *****.***** **************** .*. 

231. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042376 (Leuconostoc carnosum strain CBA3620 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatggtatgtgtgcctagatagttg	Protospacer
   *****.***** **************** .*. 

232. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042400 (Weissella hellenica strain CBA3632 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatggtatgtgtgcctagatagggt	Protospacer
   *****.***** **************** .  *

233. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014612 (Leuconostoc mesenteroides subsp. jonggajibkimchii strain DRC1506 plasmid pDRC1, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatggtatgtgtgcctagatagttg	Protospacer
   *****.***** **************** .*. 

234. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017200 (Leuconostoc gelidum subsp. gasicomitatum strain TMW 2.1619 plasmid pL21619-3, complete genome) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatcgtatgtgtgcctagatagttg	Protospacer
   *****.*****.**************** .*. 

235. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042384 (Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttgcgcatggtatgggtgcctagatagtta	Protospacer
   *********** ***** ********** .*. 

236. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012874 (Weissella cibaria strain CH2 plasmid pMKC01, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatcgtatgtgtgcctagatagttg	Protospacer
   *****.*****.**************** .*. 

237. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012876 (Weissella cibaria strain CH2 plasmid pMKC03, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatggtatgtgtgcctagatagtta	Protospacer
   *****.***** **************** .*. 

238. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012876 (Weissella cibaria strain CH2 plasmid pMKC03, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatggtatgtgtgcctagatagtta	Protospacer
   *****.***** **************** .*. 

239. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012876 (Weissella cibaria strain CH2 plasmid pMKC03, complete sequence) position: , mismatch: 9, identity: 0.75

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatggtatgtgtgcctagatagtta	Protospacer
   *****.***** **************** .*. 

240. spacer 10.4|2200405|38|NC_013315|CRT matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 9, identity: 0.763

tttctgtatattttagttgtgttttaatattataacac	CRISPR spacer
attctgaatattttggttgtgttttaatatatagtcat	Protospacer
 ***** *******.***************   . **.

241. spacer 10.13|2200405|37|NC_013315|CRISPRCasFinder matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 9, identity: 0.757

tttctgtatattttagttgtgttttaatattataaca	CRISPR spacer
ctatcgtatattttacttgtgtattaatattattgct	Protospacer
.* ..********** ****** ********** .* 

242. spacer 10.21|2200406|37|NC_013315|PILER-CR matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 9, identity: 0.757

tttctgtatattttagttgtgttttaatattataaca	CRISPR spacer
ctatcgtatattttacttgtgtattaatattattgct	Protospacer
.* ..********** ****** ********** .* 

243. spacer 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 9, identity: 0.757

ttttatatttaattttaaagattaaaggtataaacaa	CRISPR spacer
tttacaatttaatattaaagaataaaggtataactct	Protospacer
***   ******* ******* *********** .  

244. spacer 14.11|3245182|37|NC_013315|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 9, identity: 0.757

ttttatatttaattttaaagattaaaggtataaacaa	CRISPR spacer
tttacaatttaatattaaagaataaaggtataactct	Protospacer
***   ******* ******* *********** .  

245. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to KJ018210 (Flavobacterium sp. phage 1/32, complete genome) position: , mismatch: 10, identity: 0.667

ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
tagtaaattacaaaaattaatataaacatt	Protospacer
. . .  *** ***************** .

246. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MF288922 (Bacillus phage Janet, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

247. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MH538296 (Bacillus phage Maceta, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

248. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_024216 (Bacillus phage CAM003, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

249. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KJ489400 (Bacillus phage Hoody T, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

250. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MF288921 (Bacillus phage OTooleKemple52, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

251. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MH638310 (Bacillus phage Kamfam, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

252. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MK215646 (Bacillus phage vB_BthM-Goe5, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

253. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KU737346 (Bacillus phage Vinny, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

254. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_024207 (Bacillus phage Evoli, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

255. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MF498901 (Bacillus phage Anthony, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

256. spacer 4.1|1294756|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_018856 (Bacillus phage Bastille, complete genome) position: , mismatch: 10, identity: 0.73

tctccatctccaattaacataaataattcatccgctg	CRISPR spacer
acgcgttctccaattaacataaataaatcctccttaa	Protospacer
 * *  ******************** ** *** . .

257. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ttaatttcttttattatatatatatatataaata	Protospacer
  . .*  .**** ******************* 

258. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR215033 (Mycoplasma gallopavonis strain NCTC10186 plasmid 3) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ttagtacattttaatatatatatatatatatata	Protospacer
  . .  *.********************* ** 

259. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015507 (Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
taaaaagactttaatatatatatttatatagaaa	Protospacer
 ..   ***************** ******.*  

260. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ttaatttcttttattatatatatatatataaata	Protospacer
  . .*  .**** ******************* 

261. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MN693105 (Marine virus AFVG_25M79, complete genome) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ataaatatatttaatatatatatatatatatata	Protospacer
. .  *.  ********************* ** 

262. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KY554775 (Lactococcus phage AM11, complete genome) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ataaaataatttaatatatatatatatatatata	Protospacer
. .    * ********************* ** 

263. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KY554773 (Lactococcus phage AM8, complete genome) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ataaaataatttaatatatatatatatatatata	Protospacer
. .    * ********************* ** 

264. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KY554768 (Lactococcus phage AM1, complete genome) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ataaaataatttaatatatatatatatatatata	Protospacer
. .    * ********************* ** 

265. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KY554769 (Lactococcus phage AM2, complete genome) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ataaaataatttaatatatatatatatatatata	Protospacer
. .    * ********************* ** 

266. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
caagtaggatttaatatatatatatatatatata	Protospacer
 .. . *. ********************* ** 

267. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KY554770 (Lactococcus phage AM3, complete genome) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ataaaataatttaatatatatatatatatatata	Protospacer
. .    * ********************* ** 

268. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
caagtaggatttaatatatatatatatatatata	Protospacer
 .. . *. ********************* ** 

269. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KY554776 (Lactococcus phage AM12, complete genome) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ataaaataatttaatatatatatatatatatata	Protospacer
. .    * ********************* ** 

270. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to KY554774 (Lactococcus phage AM9, complete genome) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ataaaataatttaatatatatatatatatatata	Protospacer
. .    * ********************* ** 

271. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004866 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB7921, complete sequence) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
aaatacaattttaatatatatatctaaataaata	Protospacer
...* ..*.************** ** ****** 

272. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009542 (Bacillus anthracis strain BA1015 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.706

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
cttttttcttttgatatatatatatatatatata	Protospacer
   *.*  .***.***************** ** 

273. spacer 8.7|1712325|33|NC_013315|CRISPRCasFinder matches to AP019525 (Tenacibaculum phage PTm5 DNA, complete genome) position: , mismatch: 10, identity: 0.697

acttatttacagctttatttgctaaatcagaag	CRISPR spacer
taccatttacagctttttttggtaaatctttaa	Protospacer
  ..************ **** ******   *.

274. spacer 8.7|1712325|33|NC_013315|CRISPRCasFinder matches to AP019524 (Tenacibaculum phage PTm1 DNA, complete genome) position: , mismatch: 10, identity: 0.697

acttatttacagctttatttgctaaatcagaag	CRISPR spacer
taccatttacagctttttttggtaaatctttaa	Protospacer
  ..************ **** ******   *.

275. spacer 9.9|1850222|36|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033609 (Weissella hellenica strain 0916-4-2 plasmid pWHSP041, complete sequence) position: , mismatch: 10, identity: 0.722

aaagttttgcgcattgtatgtgtgcctagattatct	CRISPR spacer
cctgttttacgcatggtatgtgtgcctagataggtc	Protospacer
   *****.***** **************** . ..

276. spacer 9.10|1850287|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 10, identity: 0.73

atgtccccacatcaattttcctccgcatgaaaaaatc	CRISPR spacer
nnnnnnnnnnatcaattttcctccgcatgaaaaaatc	Protospacer
          ***************************

277. spacer 10.4|2200405|38|NC_013315|CRT matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 10, identity: 0.737

tttctgtatattttagttgtgttttaatattataacac	CRISPR spacer
ctatcgtatattttacttgtgtattaatattattgcta	Protospacer
.* ..********** ****** ********** .*  

278. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053290 (Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ttaatttcttttattttatatatatatataaata	Protospacer
  . .*  .**** * ***************** 

279. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 11, identity: 0.676

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ataataaatattgatatttatatatatataaatt	Protospacer
. . . .*. **.**** ****************

280. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_005707 (Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence) position: , mismatch: 11, identity: 0.676

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ttaatttcttttattttatatatatatataaata	Protospacer
  . .*  .**** * ***************** 

281. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 11, identity: 0.676

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ttaatttcttttattttatatatatatataaata	Protospacer
  . .*  .**** * ***************** 

282. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 11, identity: 0.676

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
ttaatttcttttattttatatatatatataaata	Protospacer
  . .*  .**** * ***************** 

283. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to AP013659 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S34-C213, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.676

gggtctgactttaatatatatatatatataaatt	CRISPR spacer
tctattgactttaataaataaatatatattttgt	Protospacer
    .*********** *** ********    *

284. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MN694638 (Marine virus AFVG_250M1093, complete genome) position: , mismatch: 12, identity: 0.647

gggtctgactttaatatatatatatatataaatt--------	CRISPR spacer
--------tattaatatatatatatatataaaagagtaaaga	Protospacer
        . **********************          

285. spacer 4.13|1295549|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 12, identity: 0.676

tgctgtgccacaatttgatgcttctatagctaaattc	CRISPR spacer
caatgtggcacaatttgttgcttctataggcggaaag	Protospacer
.. **** ********* *********** ...*   

286. spacer 4.13|1295549|37|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 12, identity: 0.676

tgctgtgccacaatttgatgcttctatagctaaattc	CRISPR spacer
caatgtggcacaatttgttgcttctataggcggaaag	Protospacer
.. **** ********* *********** ...*   

287. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MT774377 (CrAssphage cr107_1, complete genome) position: , mismatch: 13, identity: 0.618

gggtctgactttaatatatatatatatataaatt------	CRISPR spacer
------tatatatatatatatatatataaaagttgggcaa	Protospacer
       *. *  *************** **.**      

288. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to LR794151 (Bacteriophage APSE-7 strain HaDrplatanoidis-3702 genome assembly, chromosome: 1) position: , mismatch: 13, identity: 0.618

gggtctgactttaatatatatatatatataaatt------------	CRISPR spacer
------------aatatatatatatatatatatttaatagagaaaa	Protospacer
            ****************** ***            

289. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MK504442 (Lactobacillus phage 3-SAC12, complete genome) position: , mismatch: 13, identity: 0.618

gggtctgactttaatatatatatatatataaatt--------	CRISPR spacer
--------catatatatatatatatatataaaagactttctt	Protospacer
        * *  *******************          

290. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020746 (Bacillus mycoides strain Gnyt1 plasmid unnamed3, complete sequence) position: , mismatch: 14, identity: 0.588

gggtctgactttaatatatatatatatataaatt------------	CRISPR spacer
------------aatatatatatatatatatataaaattatttgta	Protospacer
            ****************** **             

291. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050055 (Pseudomonas aeruginosa strain LIUYANG-A plasmid unnamed2, complete sequence) position: , mismatch: 14, identity: 0.588

gggtctgactttaatatatatatatatataaatt--------	CRISPR spacer
--------aatctatatatatatatatataaacaatacacac	Protospacer
          *. *******************.         

292. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MN694330 (Marine virus AFVG_250M1134, complete genome) position: , mismatch: 14, identity: 0.588

gggtctgactttaatatatatatatatataaatt--------	CRISPR spacer
--------catatatatatatatatatatgaaacatgggggg	Protospacer
        * *  ****************.** .        

293. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to MH892354 (Streptococcus phage SW3, complete genome) position: , mismatch: 14, identity: 0.588

gggtctgactttaatatatatatatatataaatt--------	CRISPR spacer
--------tatatatatatatatatatataaaaaagagagcg	Protospacer
        . *  *******************          

294. spacer 4.7|1295155|34|NC_013315|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009698 (Bacillus anthracis strain BA1035 plasmid pXO2, complete sequence) position: , mismatch: 15, identity: 0.559

gggtctgactttaatatatatatatatataaatt------------	CRISPR spacer
------------tatatatatatatatatatatcaaaagaaaaaag	Protospacer
             ***************** **.            

295. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 16, identity: 0.467

----------ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aatatatatataaatttttttaaaaattat----------	Protospacer
          . ** ****  ********           

296. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP040783 (Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence) position: , mismatch: 16, identity: 0.467

----------ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aatatatatataaatttttttaaaaattat----------	Protospacer
          . ** ****  ********           

297. spacer 3.1|999561|30|NC_013315|CRISPRCasFinder matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 16, identity: 0.467

----------ctaagttttaaaaaaattaatataaacaac	CRISPR spacer
aatatatatataaatttttttaaaaattat----------	Protospacer
          . ** ****  ********           

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 274731 : 290917 14 Synechococcus_phage(23.08%) NA NA
DBSCAN-SWA_2 577883 : 648539 53 Streptococcus_phage(33.33%) protease,transposase,tRNA,coat NA
DBSCAN-SWA_3 1382188 : 1454773 69 Clostridium_phage(44.44%) protease,tail,plate,integrase,tRNA,portal attL 1376593:1376611|attR 1419741:1419759
DBSCAN-SWA_4 1537465 : 1546010 10 Pandoravirus(33.33%) NA NA
DBSCAN-SWA_5 1673421 : 1730314 68 Clostridium_phage(79.63%) capsid,terminase,holin,tail,plate,integrase,portal attL 1667424:1667439|attR 1676644:1676659
DBSCAN-SWA_6 3047775 : 3056728 8 Catovirus(50.0%) NA NA
DBSCAN-SWA_7 3836029 : 3845765 12 Clostridioides_phage(100.0%) NA NA
DBSCAN-SWA_8 4021584 : 4037007 19 Streptococcus_phage(92.31%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage