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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_012552 Lactobacillus johnsonii FI9785 plasmid p9785S, complete sequence 0 crisprs NA 0 0 0 0
NC_013504 Lactobacillus johnsonii FI9785, complete genome 1 crisprs cas3,c2c9_V-U4,cas14j,DEDDh,DinG,RT,csa3 0 0 3 0
NC_013505 Lactobacillus johnsonii FI9785 plasmid p9785L, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NC_013504
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_013504_1 973657-973745 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 427365 : 490413 50 Staphylococcus_phage(18.75%) tRNA,bacteriocin,protease,transposase NA
DBSCAN-SWA_2 678683 : 685915 8 Pacmanvirus(16.67%) NA NA
DBSCAN-SWA_3 692649 : 812407 114 Lactobacillus_phage(32.76%) integrase,holin,protease,terminase,portal,head,capsid,tail,tRNA attL 690322:690340|attR 750915:750933
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage