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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_003062 Agrobacterium fabrum str. C58 chromosome circular, complete sequence 0 crisprs cas3,WYL,csa3,DEDDh 0 0 3 0
NC_003065 Agrobacterium fabrum str. C58 plasmid Ti, complete sequence 0 crisprs NA 0 0 0 0
NC_003063 Agrobacterium fabrum str. C58 chromosome linear, complete sequence 0 crisprs csa3,DEDDh 0 0 1 0
NC_003064 Agrobacterium fabrum str. C58 plasmid At, complete sequence 0 crisprs WYL,csa3 0 0 0 0

Results visualization

1. NC_003062
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 433830 : 457882 35 Sinorhizobium_phage(38.89%) tail,integrase,plate,holin attL 430704:430750|attR 460936:460982
DBSCAN-SWA_2 943699 : 950403 9 Geobacillus_phage(33.33%) protease,portal,tail,head,capsid NA
DBSCAN-SWA_3 1684807 : 1693244 9 uncultured_Mediterranean_phage(75.0%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_003063
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1758820 : 1769752 9 Enterobacteria_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage