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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_014159 Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence 0 crisprs NA 0 0 1 0
NC_014158 Tsukamurella paurometabola DSM 20162, complete sequence 1 crisprs WYL,csa3,DinG,DEDDh,RT,cas3 0 0 4 0

Results visualization

1. NC_014158
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014158_1 761205-761363 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 235516 : 283240 41 Mycobacterium_phage(28.57%) tRNA,protease,transposase NA
DBSCAN-SWA_2 287266 : 345031 47 Mycobacterium_phage(42.86%) protease,transposase NA
DBSCAN-SWA_3 1490233 : 1547441 48 Mycobacterium_phage(13.33%) integrase,tRNA,protease attL 1482989:1483006|attR 1549797:1549814
DBSCAN-SWA_4 3989936 : 4049057 57 Staphylococcus_phage(18.75%) capsid,holin,protease,transposase,portal,terminase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_014159
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4494 : 60374 54 Mycobacterium_phage(38.46%) integrase,protease,transposase attL 27632:27691|attR 60434:62703
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage