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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_014206 Geobacillus sp. C56-T3, complete genome 8 crisprs csa3,c2c10_CAS-V-U3,DEDDh,cas3,DinG,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,cas14j 1 28 10 1

Results visualization

1. NC_014206
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014206_1 428330-428428 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014206_2 638908-638990 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014206_3 686795-686889 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014206_4 1479092-1484917 Unclear NA
89 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014206_5 1488006-1488949 Unclear NA
14 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014206_6 1490918-1492909 Unclear NA
30 spacers
cas2,cas1,cas4,cas3,cas5,cas7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014206_7 1661431-1661529 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014206_8 2915773-2915865 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_014206_5 5.4|1488234|35|NC_014206|CRT,PILER-CR,CRISPRCasFinder 1488234-1488268 35 NC_014206.1 264688-264722 0 1.0

1. spacer 5.4|1488234|35|NC_014206|CRT,PILER-CR,CRISPRCasFinder matches to position: 264688-264722, mismatch: 0, identity: 1.0

aacaaccgaaaccgctcaatattcatcagaaactc	CRISPR spacer
aacaaccgaaaccgctcaatattcatcagaaactc	Protospacer
***********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_014206_4 4.56|1482701|37|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1482701-1482737 37 AB823818 Phage phi OH2 DNA, complete genome 24217-24253 0 1.0
NC_014206_6 6.12|1491663|36|NC_014206|CRISPRCasFinder,CRT 1491663-1491698 36 NC_008376 Geobacillus phage GBSV1, complete genome 21213-21248 0 1.0
NC_014206_6 6.12|1491663|36|NC_014206|CRISPRCasFinder,CRT 1491663-1491698 36 NC_009737 Bacillus virus 1, complete genome 21537-21572 0 1.0
NC_014206_6 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT 1492327-1492362 36 NZ_CP025075 [Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence 2179-2214 0 1.0
NC_014206_6 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT 1492456-1492493 38 NC_014916 Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequence 43517-43554 0 1.0
NC_014206_6 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT 1492456-1492493 38 NC_013412 Geobacillus sp. Y412MC61, complete sequence 33178-33215 0 1.0
NC_014206_4 4.37|1481467|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1481467-1481501 35 AB823818 Phage phi OH2 DNA, complete genome 18408-18442 1 0.971
NC_014206_6 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT 1491923-1491961 39 CP011833 Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence 25757-25795 1 0.974
NC_014206_6 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT 1491923-1491961 39 NC_022092 Geobacillus genomosp. 3 plasmid pBt40, complete sequence 25322-25360 1 0.974
NC_014206_6 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT 1491923-1491961 39 NZ_CP025075 [Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence 3065-3103 1 0.974
NC_014206_6 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT 1491923-1491961 39 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 12132-12170 1 0.974
NC_014206_6 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT 1491923-1491961 39 CP008904 Geobacillus sp. LC300 plasmid pGt35, complete sequence 27012-27050 1 0.974
NC_014206_6 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT 1491923-1491961 39 NC_006509 Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence 4016-4054 1 0.974
NC_014206_6 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT 1491923-1491961 39 CP017693 Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence 28861-28899 1 0.974
NC_014206_6 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT 1491923-1491961 39 NC_010420 Geobacillus stearothermophilus plasmid pGS18, strain 18 2565-2603 1 0.974
NC_014206_6 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT 1492327-1492362 36 NZ_CP051164 Geobacillus subterraneus strain CPW16 plasmid pBsrF30, complete sequence 24981-25016 1 0.972
NC_014206_6 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT 1492327-1492362 36 CP011833 Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence 26646-26681 1 0.972
NC_014206_6 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT 1492327-1492362 36 NC_022092 Geobacillus genomosp. 3 plasmid pBt40, complete sequence 26211-26246 1 0.972
NC_014206_6 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT 1492327-1492362 36 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 11246-11281 1 0.972
NC_014206_6 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT 1492327-1492362 36 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 44007-44042 1 0.972
NC_014206_6 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT 1492327-1492362 36 CP008904 Geobacillus sp. LC300 plasmid pGt35, complete sequence 26126-26161 1 0.972
NC_014206_6 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT 1492327-1492362 36 NC_006509 Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence 3130-3165 1 0.972
NC_014206_6 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT 1492327-1492362 36 CP017693 Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence 27975-28010 1 0.972
NC_014206_6 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT 1492327-1492362 36 NC_010420 Geobacillus stearothermophilus plasmid pGS18, strain 18 1679-1714 1 0.972
NC_014206_6 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT 1492456-1492493 38 NZ_CP025075 [Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence 23311-23348 1 0.974
NC_014206_6 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT 1492456-1492493 38 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 6926-6963 1 0.974
NC_014206_6 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT 1492456-1492493 38 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 39690-39727 1 0.974
NC_014206_6 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT 1492456-1492493 38 CP008904 Geobacillus sp. LC300 plasmid pGt35, complete sequence 21089-21126 1 0.974
NC_014206_6 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT 1492456-1492493 38 NC_006509 Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence 47004-47041 1 0.974
NC_014206_6 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT 1492456-1492493 38 CP011833 Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence 30609-30646 1 0.974
NC_014206_6 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT 1492456-1492493 38 NC_022092 Geobacillus genomosp. 3 plasmid pBt40, complete sequence 28234-28271 1 0.974
NC_014206_6 6.40|1491662|37|NC_014206|PILER-CR 1491662-1491698 37 NC_008376 Geobacillus phage GBSV1, complete genome 21212-21248 1 0.973
NC_014206_6 6.40|1491662|37|NC_014206|PILER-CR 1491662-1491698 37 NC_009737 Bacillus virus 1, complete genome 21536-21572 1 0.973
NC_014206_6 6.44|1491922|40|NC_014206|PILER-CR 1491922-1491961 40 NZ_CP025075 [Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence 3065-3104 1 0.975
NC_014206_6 6.44|1491922|40|NC_014206|PILER-CR 1491922-1491961 40 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 12132-12171 1 0.975
NC_014206_6 6.44|1491922|40|NC_014206|PILER-CR 1491922-1491961 40 CP008904 Geobacillus sp. LC300 plasmid pGt35, complete sequence 27012-27051 1 0.975
NC_014206_6 6.44|1491922|40|NC_014206|PILER-CR 1491922-1491961 40 CP011833 Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence 25756-25795 1 0.975
NC_014206_6 6.44|1491922|40|NC_014206|PILER-CR 1491922-1491961 40 NC_022092 Geobacillus genomosp. 3 plasmid pBt40, complete sequence 25321-25360 1 0.975
NC_014206_6 6.44|1491922|40|NC_014206|PILER-CR 1491922-1491961 40 NC_006509 Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence 4016-4055 1 0.975
NC_014206_6 6.44|1491922|40|NC_014206|PILER-CR 1491922-1491961 40 CP017693 Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence 28861-28900 1 0.975
NC_014206_6 6.44|1491922|40|NC_014206|PILER-CR 1491922-1491961 40 NC_010420 Geobacillus stearothermophilus plasmid pGS18, strain 18 2565-2604 1 0.975
NC_014206_6 6.50|1492326|37|NC_014206|PILER-CR 1492326-1492362 37 NZ_CP025075 [Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence 2179-2215 1 0.973
NC_014206_6 6.52|1492455|39|NC_014206|PILER-CR 1492455-1492493 39 NC_014916 Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequence 43516-43554 1 0.974
NC_014206_6 6.52|1492455|39|NC_014206|PILER-CR 1492455-1492493 39 NC_013412 Geobacillus sp. Y412MC61, complete sequence 33178-33216 1 0.974
NC_014206_4 4.6|1479450|38|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1479450-1479487 38 NC_009552 Geobacillus virus E2, complete genome 20400-20437 2 0.947
NC_014206_4 4.37|1481467|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1481467-1481501 35 NZ_CP015439 Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence 200786-200820 2 0.943
NC_014206_4 4.39|1481596|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1481596-1481630 35 AB823818 Phage phi OH2 DNA, complete genome 26057-26091 2 0.943
NC_014206_5 5.7|1488428|36|NC_014206|CRT,PILER-CR,CRISPRCasFinder 1488428-1488463 36 NC_029073 Geobacillus virus E3, complete genome 138699-138734 2 0.944
NC_014206_6 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT 1492456-1492493 38 CP017693 Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence 23959-23996 2 0.947
NC_014206_6 6.50|1492326|37|NC_014206|PILER-CR 1492326-1492362 37 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 11246-11282 2 0.946
NC_014206_6 6.50|1492326|37|NC_014206|PILER-CR 1492326-1492362 37 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 44007-44043 2 0.946
NC_014206_6 6.50|1492326|37|NC_014206|PILER-CR 1492326-1492362 37 CP008904 Geobacillus sp. LC300 plasmid pGt35, complete sequence 26126-26162 2 0.946
NC_014206_6 6.50|1492326|37|NC_014206|PILER-CR 1492326-1492362 37 NC_006509 Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence 3130-3166 2 0.946
NC_014206_6 6.50|1492326|37|NC_014206|PILER-CR 1492326-1492362 37 CP017693 Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence 27975-28011 2 0.946
NC_014206_6 6.50|1492326|37|NC_014206|PILER-CR 1492326-1492362 37 NC_010420 Geobacillus stearothermophilus plasmid pGS18, strain 18 1679-1715 2 0.946
NC_014206_6 6.50|1492326|37|NC_014206|PILER-CR 1492326-1492362 37 NZ_CP051164 Geobacillus subterraneus strain CPW16 plasmid pBsrF30, complete sequence 24980-25016 2 0.946
NC_014206_6 6.50|1492326|37|NC_014206|PILER-CR 1492326-1492362 37 CP011833 Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence 26645-26681 2 0.946
NC_014206_6 6.50|1492326|37|NC_014206|PILER-CR 1492326-1492362 37 NC_022092 Geobacillus genomosp. 3 plasmid pBt40, complete sequence 26210-26246 2 0.946
NC_014206_6 6.52|1492455|39|NC_014206|PILER-CR 1492455-1492493 39 NZ_CP025075 [Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence 23310-23348 2 0.949
NC_014206_6 6.52|1492455|39|NC_014206|PILER-CR 1492455-1492493 39 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 6925-6963 2 0.949
NC_014206_6 6.52|1492455|39|NC_014206|PILER-CR 1492455-1492493 39 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 39689-39727 2 0.949
NC_014206_6 6.52|1492455|39|NC_014206|PILER-CR 1492455-1492493 39 CP008904 Geobacillus sp. LC300 plasmid pGt35, complete sequence 21088-21126 2 0.949
NC_014206_6 6.52|1492455|39|NC_014206|PILER-CR 1492455-1492493 39 NC_006509 Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence 47003-47041 2 0.949
NC_014206_6 6.52|1492455|39|NC_014206|PILER-CR 1492455-1492493 39 CP011833 Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence 30609-30647 2 0.949
NC_014206_6 6.52|1492455|39|NC_014206|PILER-CR 1492455-1492493 39 NC_022092 Geobacillus genomosp. 3 plasmid pBt40, complete sequence 28234-28272 2 0.949
NC_014206_4 4.30|1481010|39|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1481010-1481048 39 NZ_AP022559 Geobacillus subterraneus strain E55-1 plasmid pGspE55-2, complete sequence 25888-25926 3 0.923
NC_014206_4 4.84|1484526|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1484526-1484560 35 NZ_AP022559 Geobacillus subterraneus strain E55-1 plasmid pGspE55-2, complete sequence 36708-36742 3 0.914
NC_014206_5 5.2|1488103|38|NC_014206|CRT,PILER-CR,CRISPRCasFinder 1488103-1488140 38 NC_029073 Geobacillus virus E3, complete genome 131289-131326 3 0.921
NC_014206_6 6.2|1491011|35|NC_014206|CRISPRCasFinder,CRT 1491011-1491045 35 NC_009737 Bacillus virus 1, complete genome 34652-34686 3 0.914
NC_014206_6 6.32|1491021|34|NC_014206|PILER-CR 1491021-1491054 34 NC_009737 Bacillus virus 1, complete genome 34653-34686 3 0.912
NC_014206_6 6.52|1492455|39|NC_014206|PILER-CR 1492455-1492493 39 CP017693 Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence 23958-23996 3 0.923
NC_014206_6 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT 1491923-1491961 39 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 44892-44930 4 0.897
NC_014206_6 6.44|1491922|40|NC_014206|PILER-CR 1491922-1491961 40 NZ_CP014336 Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence 44892-44931 4 0.9
NC_014206_4 4.9|1479651|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1479651-1479685 35 NC_009552 Geobacillus virus E2, complete genome 21064-21098 5 0.857
NC_014206_4 4.29|1480946|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480946-1480980 35 NZ_CP015439 Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence 187024-187058 5 0.857
NC_014206_1 1.1|428361|37|NC_014206|CRISPRCasFinder 428361-428397 37 FQ857195 Erwinia phage phiEa116, WORKING DRAFT SEQUENCE, 6 unordered pieces 30093-30129 7 0.811
NC_014206_1 1.1|428361|37|NC_014206|CRISPRCasFinder 428361-428397 37 HQ728263 Erwinia phage vB_EamM-M7, complete genome 27184-27220 7 0.811
NC_014206_8 8.1|2915803|33|NC_014206|CRISPRCasFinder 2915803-2915835 33 NZ_CP016289 Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence 568871-568903 7 0.788
NC_014206_8 8.1|2915803|33|NC_014206|CRISPRCasFinder 2915803-2915835 33 NZ_CP050099 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence 293832-293864 7 0.788
NC_014206_8 8.1|2915803|33|NC_014206|CRISPRCasFinder 2915803-2915835 33 NZ_CP053441 Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence 320020-320052 7 0.788
NC_014206_1 1.1|428361|37|NC_014206|CRISPRCasFinder 428361-428397 37 MG592441 Vibrio phage 1.063.O._10N.261.45.C7, partial genome 39642-39678 8 0.784
NC_014206_4 4.10|1479715|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1479715-1479749 35 NZ_CP045561 Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence 33811-33845 8 0.771
NC_014206_4 4.10|1479715|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1479715-1479749 35 NZ_CP014478 Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence 32867-32901 8 0.771
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NZ_CP017573 Bacillus thuringiensis strain SCG04-02 plasmid PSCG61, complete sequence 53320-53352 8 0.758
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NZ_CP047087 Bacillus paranthracis strain BC307 plasmid pCE2, complete sequence 17181-17213 8 0.758
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NC_018510 Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence 204757-204789 8 0.758
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 CP047390 Agrobacterium sp. CGMCC 11546 plasmid pB 78113-78145 8 0.758
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NZ_CP029456 Bacillus cereus strain FORC087 plasmid pFORC087.2, complete sequence 18823-18855 8 0.758
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NZ_CP013280 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence 62070-62102 8 0.758
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NZ_CP043834 Bacillus sp. BS98 plasmid unnamed4 24908-24940 8 0.758
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NZ_CP039726 Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence 71116-71148 8 0.758
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 CP041752 Bacillus paranthracis strain NCCP 14796 plasmid unnamed2, complete sequence 13690-13722 8 0.758
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NZ_CP009350 Bacillus thuringiensis HD1002 plasmid 4, complete sequence 90900-90932 8 0.758
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NZ_CP020436 Bacillus sp. FDAARGOS_235 plasmid 2, complete sequence 36485-36517 8 0.758
NC_014206_8 8.1|2915803|33|NC_014206|CRISPRCasFinder 2915803-2915835 33 NZ_JX627581 Methylobacterium oryzae CBMB20 plasmid pMOC2, complete sequence 3069-3101 8 0.758
NC_014206_4 4.15|1480037|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480037-1480071 35 NZ_CP027859 Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence 1056808-1056842 9 0.743
NC_014206_4 4.15|1480037|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480037-1480071 35 NZ_CP032054 Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence 658538-658572 9 0.743
NC_014206_4 4.15|1480037|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480037-1480071 35 NZ_CP016560 Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence 315794-315828 9 0.743
NC_014206_4 4.10|1479715|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1479715-1479749 35 NZ_CP040855 Lactobacillus johnsonii strain G2A plasmid unnamed1 59857-59891 10 0.714
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NZ_CP016630 Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence 102-134 10 0.697
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 NZ_CP016630 Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence 25951-25983 10 0.697
NC_014206_4 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480298-1480330 33 CP024782 Lactobacillus johnsonii pf01 plasmid pLJPF01L, complete sequence 18569-18601 10 0.697
NC_014206_4 4.84|1484526|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1484526-1484560 35 NZ_CP015091 Pelagibaca abyssi strain JLT2014 plasmid pPABY1, complete sequence 39416-39450 10 0.714
NC_014206_5 5.6|1488362|37|NC_014206|CRT,PILER-CR,CRISPRCasFinder 1488362-1488398 37 NZ_CP019362 Borrelia turicatae 91E135 isolate Oz1 plasmid cp31, complete sequence 28853-28889 11 0.703
NC_014206_6 6.5|1491207|35|NC_014206|CRISPRCasFinder,CRT 1491207-1491241 35 NZ_CP043762 Paenibacillus sp. 37 plasmid pART37, complete sequence 538261-538295 11 0.686
NC_014206_4 4.24|1480619|36|NC_014206|PILER-CR,CRISPRCasFinder,CRT 1480619-1480654 36 MG592444 Vibrio phage 1.067.O._10N.261.52.C9, partial genome 24619-24654 12 0.667

1. spacer 4.56|1482701|37|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to AB823818 (Phage phi OH2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cggttccacgcttctgccagttctgcctggcggacag	CRISPR spacer
cggttccacgcttctgccagttctgcctggcggacag	Protospacer
*************************************

2. spacer 6.12|1491663|36|NC_014206|CRISPRCasFinder,CRT matches to NC_008376 (Geobacillus phage GBSV1, complete genome) position: , mismatch: 0, identity: 1.0

tcgtatttcgtgaaattgctcgatacgtttttaatc	CRISPR spacer
tcgtatttcgtgaaattgctcgatacgtttttaatc	Protospacer
************************************

3. spacer 6.12|1491663|36|NC_014206|CRISPRCasFinder,CRT matches to NC_009737 (Bacillus virus 1, complete genome) position: , mismatch: 0, identity: 1.0

tcgtatttcgtgaaattgctcgatacgtttttaatc	CRISPR spacer
tcgtatttcgtgaaattgctcgatacgtttttaatc	Protospacer
************************************

4. spacer 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP025075 ([Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence) position: , mismatch: 0, identity: 1.0

atcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
atcgtatggcaatccacatccacatacagagccctc	Protospacer
************************************

5. spacer 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT matches to NC_014916 (Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequence) position: , mismatch: 0, identity: 1.0

ttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
ttttcagtatacatttggcctttcgcttgcacagctgc	Protospacer
**************************************

6. spacer 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT matches to NC_013412 (Geobacillus sp. Y412MC61, complete sequence) position: , mismatch: 0, identity: 1.0

ttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
ttttcagtatacatttggcctttcgcttgcacagctgc	Protospacer
**************************************

7. spacer 4.37|1481467|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to AB823818 (Phage phi OH2 DNA, complete genome) position: , mismatch: 1, identity: 0.971

tgaagagattgtgtcgtttattcgcgtgtatgaag	CRISPR spacer
tgaagagattgtgtcgtttattcgggtgtatgaag	Protospacer
************************ **********

8. spacer 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT matches to CP011833 (Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence) position: , mismatch: 1, identity: 0.974

ttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
ttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
*********************************.*****

9. spacer 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT matches to NC_022092 (Geobacillus genomosp. 3 plasmid pBt40, complete sequence) position: , mismatch: 1, identity: 0.974

ttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
ttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
*********************************.*****

10. spacer 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP025075 ([Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence) position: , mismatch: 1, identity: 0.974

ttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
ttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
*********************************.*****

11. spacer 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 1, identity: 0.974

ttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
ttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
*********************************.*****

12. spacer 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT matches to CP008904 (Geobacillus sp. LC300 plasmid pGt35, complete sequence) position: , mismatch: 1, identity: 0.974

ttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
ttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
*********************************.*****

13. spacer 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT matches to NC_006509 (Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence) position: , mismatch: 1, identity: 0.974

ttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
ttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
*********************************.*****

14. spacer 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 1, identity: 0.974

ttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
ttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
*********************************.*****

15. spacer 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT matches to NC_010420 (Geobacillus stearothermophilus plasmid pGS18, strain 18) position: , mismatch: 1, identity: 0.974

ttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
ttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
*********************************.*****

16. spacer 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP051164 (Geobacillus subterraneus strain CPW16 plasmid pBsrF30, complete sequence) position: , mismatch: 1, identity: 0.972

atcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
atcgtatggcaatccacatccacgtacagagccctc	Protospacer
***********************.************

17. spacer 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT matches to CP011833 (Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence) position: , mismatch: 1, identity: 0.972

atcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
atcgtatggcaatccacatccacgtacagagccctc	Protospacer
***********************.************

18. spacer 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT matches to NC_022092 (Geobacillus genomosp. 3 plasmid pBt40, complete sequence) position: , mismatch: 1, identity: 0.972

atcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
atcgtatggcaatccacatccacgtacagagccctc	Protospacer
***********************.************

19. spacer 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 1, identity: 0.972

atcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
atcgtatggcaatccacatccacgtacagagccctc	Protospacer
***********************.************

20. spacer 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 1, identity: 0.972

atcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
atcgtatggcaatccacatccacgtacagagccctc	Protospacer
***********************.************

21. spacer 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT matches to CP008904 (Geobacillus sp. LC300 plasmid pGt35, complete sequence) position: , mismatch: 1, identity: 0.972

atcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
atcgtatggcaatccacatccacgtacagagccctc	Protospacer
***********************.************

22. spacer 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT matches to NC_006509 (Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence) position: , mismatch: 1, identity: 0.972

atcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
atcgtatggcaatccacatccacgtacagagccctc	Protospacer
***********************.************

23. spacer 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 1, identity: 0.972

atcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
atcgtatggcaatccacatccacgtacagagccctc	Protospacer
***********************.************

24. spacer 6.22|1492327|36|NC_014206|CRISPRCasFinder,CRT matches to NC_010420 (Geobacillus stearothermophilus plasmid pGS18, strain 18) position: , mismatch: 1, identity: 0.972

atcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
atcgtatggcaatccacatccacgtacagagccctc	Protospacer
***********************.************

25. spacer 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP025075 ([Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence) position: , mismatch: 1, identity: 0.974

ttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
ttttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
******.*******************************

26. spacer 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 1, identity: 0.974

ttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
ttttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
******.*******************************

27. spacer 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 1, identity: 0.974

ttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
ttttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
******.*******************************

28. spacer 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT matches to CP008904 (Geobacillus sp. LC300 plasmid pGt35, complete sequence) position: , mismatch: 1, identity: 0.974

ttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
ttttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
******.*******************************

29. spacer 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT matches to NC_006509 (Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence) position: , mismatch: 1, identity: 0.974

ttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
ttttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
******.*******************************

30. spacer 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT matches to CP011833 (Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence) position: , mismatch: 1, identity: 0.974

ttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
ttttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
******.*******************************

31. spacer 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT matches to NC_022092 (Geobacillus genomosp. 3 plasmid pBt40, complete sequence) position: , mismatch: 1, identity: 0.974

ttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
ttttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
******.*******************************

32. spacer 6.40|1491662|37|NC_014206|PILER-CR matches to NC_008376 (Geobacillus phage GBSV1, complete genome) position: , mismatch: 1, identity: 0.973

gtcgtatttcgtgaaattgctcgatacgtttttaatc	CRISPR spacer
atcgtatttcgtgaaattgctcgatacgtttttaatc	Protospacer
.************************************

33. spacer 6.40|1491662|37|NC_014206|PILER-CR matches to NC_009737 (Bacillus virus 1, complete genome) position: , mismatch: 1, identity: 0.973

gtcgtatttcgtgaaattgctcgatacgtttttaatc	CRISPR spacer
atcgtatttcgtgaaattgctcgatacgtttttaatc	Protospacer
.************************************

34. spacer 6.44|1491922|40|NC_014206|PILER-CR matches to NZ_CP025075 ([Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence) position: , mismatch: 1, identity: 0.975

gttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
gttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
**********************************.*****

35. spacer 6.44|1491922|40|NC_014206|PILER-CR matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 1, identity: 0.975

gttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
gttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
**********************************.*****

36. spacer 6.44|1491922|40|NC_014206|PILER-CR matches to CP008904 (Geobacillus sp. LC300 plasmid pGt35, complete sequence) position: , mismatch: 1, identity: 0.975

gttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
gttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
**********************************.*****

37. spacer 6.44|1491922|40|NC_014206|PILER-CR matches to CP011833 (Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence) position: , mismatch: 1, identity: 0.975

gttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
gttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
**********************************.*****

38. spacer 6.44|1491922|40|NC_014206|PILER-CR matches to NC_022092 (Geobacillus genomosp. 3 plasmid pBt40, complete sequence) position: , mismatch: 1, identity: 0.975

gttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
gttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
**********************************.*****

39. spacer 6.44|1491922|40|NC_014206|PILER-CR matches to NC_006509 (Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence) position: , mismatch: 1, identity: 0.975

gttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
gttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
**********************************.*****

40. spacer 6.44|1491922|40|NC_014206|PILER-CR matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 1, identity: 0.975

gttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
gttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
**********************************.*****

41. spacer 6.44|1491922|40|NC_014206|PILER-CR matches to NC_010420 (Geobacillus stearothermophilus plasmid pGS18, strain 18) position: , mismatch: 1, identity: 0.975

gttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
gttgttcctcgaggtactcctcccttgtcttcgccccttg	Protospacer
**********************************.*****

42. spacer 6.50|1492326|37|NC_014206|PILER-CR matches to NZ_CP025075 ([Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence) position: , mismatch: 1, identity: 0.973

gatcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
aatcgtatggcaatccacatccacatacagagccctc	Protospacer
.************************************

43. spacer 6.52|1492455|39|NC_014206|PILER-CR matches to NC_014916 (Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequence) position: , mismatch: 1, identity: 0.974

gttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
attttcagtatacatttggcctttcgcttgcacagctgc	Protospacer
.**************************************

44. spacer 6.52|1492455|39|NC_014206|PILER-CR matches to NC_013412 (Geobacillus sp. Y412MC61, complete sequence) position: , mismatch: 1, identity: 0.974

gttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
attttcagtatacatttggcctttcgcttgcacagctgc	Protospacer
.**************************************

45. spacer 4.6|1479450|38|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NC_009552 (Geobacillus virus E2, complete genome) position: , mismatch: 2, identity: 0.947

aacacataaaatcgtggagtatgcgagcgattatttag	CRISPR spacer
aacgcataaaatcgtggagtatgcgaccgattatttag	Protospacer
***.********************** ***********

46. spacer 4.37|1481467|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 2, identity: 0.943

tgaagagattgtgtcgtttattcgcgtgtatgaag	CRISPR spacer
tgaagaaattgtgtcgtttattcgggtgtatgaag	Protospacer
******.***************** **********

47. spacer 4.39|1481596|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to AB823818 (Phage phi OH2 DNA, complete genome) position: , mismatch: 2, identity: 0.943

caagcggcaagatcatgggtattaaagggggatac-	CRISPR spacer
caaacggcaagatcatgggtatt-aagggggatacg	Protospacer
***.******************* *********** 

48. spacer 5.7|1488428|36|NC_014206|CRT,PILER-CR,CRISPRCasFinder matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 2, identity: 0.944

taatacatgtgacggtcacgccaagac-gtttgctgg	CRISPR spacer
taatacatgtgacggtcacgccacgacagtttgctg-	Protospacer
*********************** *** ******** 

49. spacer 6.24|1492456|38|NC_014206|CRISPRCasFinder,CRT matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 2, identity: 0.947

ttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
ttttcaatatacatttggcctttcgcttgaacagctgc	Protospacer
******.********************** ********

50. spacer 6.50|1492326|37|NC_014206|PILER-CR matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 2, identity: 0.946

gatcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
aatcgtatggcaatccacatccacgtacagagccctc	Protospacer
.***********************.************

51. spacer 6.50|1492326|37|NC_014206|PILER-CR matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 2, identity: 0.946

gatcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
aatcgtatggcaatccacatccacgtacagagccctc	Protospacer
.***********************.************

52. spacer 6.50|1492326|37|NC_014206|PILER-CR matches to CP008904 (Geobacillus sp. LC300 plasmid pGt35, complete sequence) position: , mismatch: 2, identity: 0.946

gatcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
aatcgtatggcaatccacatccacgtacagagccctc	Protospacer
.***********************.************

53. spacer 6.50|1492326|37|NC_014206|PILER-CR matches to NC_006509 (Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence) position: , mismatch: 2, identity: 0.946

gatcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
aatcgtatggcaatccacatccacgtacagagccctc	Protospacer
.***********************.************

54. spacer 6.50|1492326|37|NC_014206|PILER-CR matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 2, identity: 0.946

gatcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
aatcgtatggcaatccacatccacgtacagagccctc	Protospacer
.***********************.************

55. spacer 6.50|1492326|37|NC_014206|PILER-CR matches to NC_010420 (Geobacillus stearothermophilus plasmid pGS18, strain 18) position: , mismatch: 2, identity: 0.946

gatcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
aatcgtatggcaatccacatccacgtacagagccctc	Protospacer
.***********************.************

56. spacer 6.50|1492326|37|NC_014206|PILER-CR matches to NZ_CP051164 (Geobacillus subterraneus strain CPW16 plasmid pBsrF30, complete sequence) position: , mismatch: 2, identity: 0.946

gatcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
aatcgtatggcaatccacatccacgtacagagccctc	Protospacer
.***********************.************

57. spacer 6.50|1492326|37|NC_014206|PILER-CR matches to CP011833 (Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence) position: , mismatch: 2, identity: 0.946

gatcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
aatcgtatggcaatccacatccacgtacagagccctc	Protospacer
.***********************.************

58. spacer 6.50|1492326|37|NC_014206|PILER-CR matches to NC_022092 (Geobacillus genomosp. 3 plasmid pBt40, complete sequence) position: , mismatch: 2, identity: 0.946

gatcgtatggcaatccacatccacatacagagccctc	CRISPR spacer
aatcgtatggcaatccacatccacgtacagagccctc	Protospacer
.***********************.************

59. spacer 6.52|1492455|39|NC_014206|PILER-CR matches to NZ_CP025075 ([Bacillus] caldolyticus strain NEB414 plasmid pBcl1, complete sequence) position: , mismatch: 2, identity: 0.949

gttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
attttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
.******.*******************************

60. spacer 6.52|1492455|39|NC_014206|PILER-CR matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 2, identity: 0.949

gttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
attttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
.******.*******************************

61. spacer 6.52|1492455|39|NC_014206|PILER-CR matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 2, identity: 0.949

gttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
attttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
.******.*******************************

62. spacer 6.52|1492455|39|NC_014206|PILER-CR matches to CP008904 (Geobacillus sp. LC300 plasmid pGt35, complete sequence) position: , mismatch: 2, identity: 0.949

gttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
attttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
.******.*******************************

63. spacer 6.52|1492455|39|NC_014206|PILER-CR matches to NC_006509 (Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence) position: , mismatch: 2, identity: 0.949

gttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
attttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
.******.*******************************

64. spacer 6.52|1492455|39|NC_014206|PILER-CR matches to CP011833 (Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence) position: , mismatch: 2, identity: 0.949

gttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
attttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
.******.*******************************

65. spacer 6.52|1492455|39|NC_014206|PILER-CR matches to NC_022092 (Geobacillus genomosp. 3 plasmid pBt40, complete sequence) position: , mismatch: 2, identity: 0.949

gttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
attttcaatatacatttggcctttcgcttgcacagctgc	Protospacer
.******.*******************************

66. spacer 4.30|1481010|39|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022559 (Geobacillus subterraneus strain E55-1 plasmid pGspE55-2, complete sequence) position: , mismatch: 3, identity: 0.923

tgcgcacaagatgctgacagagaaggagcaggaatgcga	CRISPR spacer
cgcgcacaagctgttgacagagaaggagcaggaatgcga	Protospacer
.********* **.*************************

67. spacer 4.84|1484526|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022559 (Geobacillus subterraneus strain E55-1 plasmid pGspE55-2, complete sequence) position: , mismatch: 3, identity: 0.914

acaaaggagatgagcaacatgcgaaacaggaagcc	CRISPR spacer
acaaaggagatgagcaaaatgcgaaacaggaaaca	Protospacer
***************** **************.* 

68. spacer 5.2|1488103|38|NC_014206|CRT,PILER-CR,CRISPRCasFinder matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 3, identity: 0.921

gtgataaggttttttcattcctgccatacataaagcaa	CRISPR spacer
ttgataaggttttttcattcctgccattcctaaagcaa	Protospacer
 ************************** * ********

69. spacer 6.2|1491011|35|NC_014206|CRISPRCasFinder,CRT matches to NC_009737 (Bacillus virus 1, complete genome) position: , mismatch: 3, identity: 0.914

atcggaaatgattggattctcgatcatgccggttc	CRISPR spacer
gtcggaaatgatcggattctcgatcatgccggctc	Protospacer
.***********.*******************.**

70. spacer 6.32|1491021|34|NC_014206|PILER-CR matches to NC_009737 (Bacillus virus 1, complete genome) position: , mismatch: 3, identity: 0.912

atcggaaatgattggattctcgatcatgccggtt	CRISPR spacer
gtcggaaatgatcggattctcgatcatgccggct	Protospacer
.***********.*******************.*

71. spacer 6.52|1492455|39|NC_014206|PILER-CR matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 3, identity: 0.923

gttttcagtatacatttggcctttcgcttgcacagctgc	CRISPR spacer
attttcaatatacatttggcctttcgcttgaacagctgc	Protospacer
.******.********************** ********

72. spacer 6.16|1491923|39|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 4, identity: 0.897

ttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
ttgttcctcgaggtactcctcccttgtcttcgcccttgt	Protospacer
*********************************.*.*  

73. spacer 6.44|1491922|40|NC_014206|PILER-CR matches to NZ_CP014336 (Geobacillus thermoleovorans strain KCTC 3570 plasmid pLDW-1, complete sequence) position: , mismatch: 4, identity: 0.9

gttgttcctcgaggtactcctcccttgtcttcgctccttg	CRISPR spacer
gttgttcctcgaggtactcctcccttgtcttcgcccttgt	Protospacer
**********************************.*.*  

74. spacer 4.9|1479651|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NC_009552 (Geobacillus virus E2, complete genome) position: , mismatch: 5, identity: 0.857

----aaaacggataaatgtggtatgataggcgtgtaata	CRISPR spacer
cttcaa----gaaaaatgtggtatgataggcgtgtaata	Protospacer
    **    ** **************************

75. spacer 4.29|1480946|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 5, identity: 0.857

agaattggcacctcatcatcttgcaacgcaacatt	CRISPR spacer
agtaccggaacctcatcatcttgcaacgcaatatt	Protospacer
** *..** **********************.***

76. spacer 1.1|428361|37|NC_014206|CRISPRCasFinder matches to FQ857195 (Erwinia phage phiEa116, WORKING DRAFT SEQUENCE, 6 unordered pieces) position: , mismatch: 7, identity: 0.811

aaattcttcatctgtttcacgatcacgaccttcaatg--	CRISPR spacer
aagctcttcatctgtttcacgaccacg--ccccaatgta	Protospacer
**..******************.****  *..*****  

77. spacer 1.1|428361|37|NC_014206|CRISPRCasFinder matches to HQ728263 (Erwinia phage vB_EamM-M7, complete genome) position: , mismatch: 7, identity: 0.811

aaattcttcatctgtttcacgatcacgaccttcaatg--	CRISPR spacer
aagctcttcatctgtttcacgaccacg--ccccaatgta	Protospacer
**..******************.****  *..*****  

78. spacer 8.1|2915803|33|NC_014206|CRISPRCasFinder matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

ttcaggc---ggttccgcaacagcaagtgccgccag	CRISPR spacer
---atgcctgggttccggaacagcaggtgccgcctg	Protospacer
   * **   ******* *******.******** *

79. spacer 8.1|2915803|33|NC_014206|CRISPRCasFinder matches to NZ_CP050099 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence) position: , mismatch: 7, identity: 0.788

ttcaggc---ggttccgcaacagcaagtgccgccag	CRISPR spacer
---atgcctgggttccggaacagcaggtgccgcctg	Protospacer
   * **   ******* *******.******** *

80. spacer 8.1|2915803|33|NC_014206|CRISPRCasFinder matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 7, identity: 0.788

ttcaggc---ggttccgcaacagcaagtgccgccag	CRISPR spacer
---atgcctgggttccggaacagcaggtgccgcctg	Protospacer
   * **   ******* *******.******** *

81. spacer 1.1|428361|37|NC_014206|CRISPRCasFinder matches to MG592441 (Vibrio phage 1.063.O._10N.261.45.C7, partial genome) position: , mismatch: 8, identity: 0.784

aaattcttcatctgtttcacgatcacgaccttcaatg	CRISPR spacer
gagttcttcatctgtttcacgaaaacgacctttgtta	Protospacer
.*.*******************  ********.. *.

82. spacer 4.10|1479715|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045561 (Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence) position: , mismatch: 8, identity: 0.771

taaacttcttgctgaaaataaaattgaggaagcga	CRISPR spacer
taaactacttgctgaaaatagaattacgcaggcag	Protospacer
****** *************.****. * *.**..

83. spacer 4.10|1479715|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014478 (Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence) position: , mismatch: 8, identity: 0.771

taaacttcttgctgaaaataaaattgaggaagcga	CRISPR spacer
taaactacttgctgaaaatagaattacgcaggcag	Protospacer
****** *************.****. * *.**..

84. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017573 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG61, complete sequence) position: , mismatch: 8, identity: 0.758

----aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tgttaa----gtcttgttcaactaattgaataatata	Protospacer
    **    **.********* *********** * 

85. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047087 (Bacillus paranthracis strain BC307 plasmid pCE2, complete sequence) position: , mismatch: 8, identity: 0.758

----aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tgttaa----gtcttgttcaactaattgaataatata	Protospacer
    **    **.********* *********** * 

86. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NC_018510 (Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence) position: , mismatch: 8, identity: 0.758

----aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tgctaa----gtcttgttcaactaattgaataatata	Protospacer
    **    **.********* *********** * 

87. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to CP047390 (Agrobacterium sp. CGMCC 11546 plasmid pB) position: , mismatch: 8, identity: 0.758

aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
gaggatgttttgttcgacgagttgaataatacc	Protospacer
.*.* .*********.****.********* .*

88. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029456 (Bacillus cereus strain FORC087 plasmid pFORC087.2, complete sequence) position: , mismatch: 8, identity: 0.758

----aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tgttaa----gtcttgttcaactaattgaataatata	Protospacer
    **    **.********* *********** * 

89. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013280 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence) position: , mismatch: 8, identity: 0.758

----aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tgctaa----gtcttgttcaactaattgaataatata	Protospacer
    **    **.********* *********** * 

90. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043834 (Bacillus sp. BS98 plasmid unnamed4) position: , mismatch: 8, identity: 0.758

----aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tgttaa----gtcttgttcaactaattgaataatata	Protospacer
    **    **.********* *********** * 

91. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039726 (Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.758

----aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tgctaa----gtcttgttcaactaattgaataatata	Protospacer
    **    **.********* *********** * 

92. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to CP041752 (Bacillus paranthracis strain NCCP 14796 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

----aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tgttaa----gtcttgttcaactaattgaataatata	Protospacer
    **    **.********* *********** * 

93. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009350 (Bacillus thuringiensis HD1002 plasmid 4, complete sequence) position: , mismatch: 8, identity: 0.758

----aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tgctaa----gtcttgttcaactaattgaataatata	Protospacer
    **    **.********* *********** * 

94. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020436 (Bacillus sp. FDAARGOS_235 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.758

----aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tgttaa----gtcttgttcaactaattgaataatata	Protospacer
    **    **.********* *********** * 

95. spacer 8.1|2915803|33|NC_014206|CRISPRCasFinder matches to NZ_JX627581 (Methylobacterium oryzae CBMB20 plasmid pMOC2, complete sequence) position: , mismatch: 8, identity: 0.758

ttcaggcggttccgcaacagcaagtgccgccag	CRISPR spacer
attagcttgttctgcaacagcaagcgccgccat	Protospacer
 *.** . ****.***********.******* 

96. spacer 4.15|1480037|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 9, identity: 0.743

cgatccccttgacgcccccctcgcgatccgggagc	CRISPR spacer
cgatcccctcgaagcccccctcgcggccgagaccc	Protospacer
*********.** ************..* .*.  *

97. spacer 4.15|1480037|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 9, identity: 0.743

cgatccccttgacgcccccctcgcgatccgggagc	CRISPR spacer
cgatcccctcgaagcccccctcgcggccgagaccc	Protospacer
*********.** ************..* .*.  *

98. spacer 4.15|1480037|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 9, identity: 0.743

cgatccccttgacgcccccctcgcgatccgggagc	CRISPR spacer
cgatcccctcgaagcccccctcgcggccgagaccc	Protospacer
*********.** ************..* .*.  *

99. spacer 4.10|1479715|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040855 (Lactobacillus johnsonii strain G2A plasmid unnamed1) position: , mismatch: 10, identity: 0.714

taaacttcttgctgaaaataaaattgaggaagcga	CRISPR spacer
caggcgacttgctgaaaataaaaatgatgaagttg	Protospacer
.*..*  **************** *** ****. .

100. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016630 (Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence) position: , mismatch: 10, identity: 0.697

aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tagatgattttgttcaacgaattgcaaaatcaa	Protospacer
 *... .***************** * ****  

101. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016630 (Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence) position: , mismatch: 10, identity: 0.697

aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tagatgattttgttcaacgaattgcaaaatcaa	Protospacer
 *... .***************** * ****  

102. spacer 4.19|1480298|33|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to CP024782 (Lactobacillus johnsonii pf01 plasmid pLJPF01L, complete sequence) position: , mismatch: 10, identity: 0.697

aaagccgttttgttcaacgaattgaataatctc	CRISPR spacer
tagatgattttgttcaacgaattgcaaaatcaa	Protospacer
 *... .***************** * ****  

103. spacer 4.84|1484526|35|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015091 (Pelagibaca abyssi strain JLT2014 plasmid pPABY1, complete sequence) position: , mismatch: 10, identity: 0.714

acaaaggagatgagcaacatgcgaaacaggaagcc	CRISPR spacer
acgccaaggatgagacacatgcgaaacaggaaggt	Protospacer
**.  ...******  ***************** .

104. spacer 5.6|1488362|37|NC_014206|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019362 (Borrelia turicatae 91E135 isolate Oz1 plasmid cp31, complete sequence) position: , mismatch: 11, identity: 0.703

ttgtcagctatttttgtattgatataatggaatttgt	CRISPR spacer
acaagcgtgattttggtattgatataatggattttat	Protospacer
 ..   *. ***** **************** ***.*

105. spacer 6.5|1491207|35|NC_014206|CRISPRCasFinder,CRT matches to NZ_CP043762 (Paenibacillus sp. 37 plasmid pART37, complete sequence) position: , mismatch: 11, identity: 0.686

atagccgaatgatcttgatgcataaacgatagcaa	CRISPR spacer
tgcttcgaatgatcttgatgaatatacgattatga	Protospacer
    .*************** *** ***** ...*

106. spacer 4.24|1480619|36|NC_014206|PILER-CR,CRISPRCasFinder,CRT matches to MG592444 (Vibrio phage 1.067.O._10N.261.52.C9, partial genome) position: , mismatch: 12, identity: 0.667

cggatcaaacaccgccttggcaacaacaaaaccgac	CRISPR spacer
ttcatcaaacaccgccttgccatcaacaagcttaga	Protospacer
.  **************** ** ******. .... 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 213146 : 278470 71 Geobacillus_phage(15.62%) protease,coat,transposase,tRNA,terminase,integrase attL 228234:228250|attR 272231:272247
DBSCAN-SWA_2 289454 : 300149 12 Geobacillus_phage(100.0%) tail NA
DBSCAN-SWA_3 319062 : 327480 8 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_4 1166652 : 1216603 37 Staphylococcus_phage(66.67%) transposase NA
DBSCAN-SWA_5 1265605 : 1275458 11 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_6 1288887 : 1325942 40 Wolbachia_phage(16.67%) transposase,protease,coat NA
DBSCAN-SWA_7 2479293 : 2537420 52 Paramecium_bursaria_Chlorella_virus(23.08%) transposase,tRNA NA
DBSCAN-SWA_8 2711268 : 2717746 10 Pneumococcus_phage(33.33%) NA NA
DBSCAN-SWA_9 3280597 : 3289059 10 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_10 3620758 : 3630578 8 uncultured_Mediterranean_phage(16.67%) NA NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NC_014206.1|WP_013144065.1|262704_263019_+|hypothetical-protein 262704_263019_+ 104 aa aa NA NA NA 213146-278470 yes