CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_014498	Streptococcus pneumoniae 670-6B, complete sequence	3 crisprs	DEDDh,DinG,cas3	0	1	16	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_014498_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014498_1

15648-15727

Unclear

Consensus_repeat	Method
TGGAATTTACTTAGAAAATAAAAAA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NC_014498_1

>merge|NC_014498|1|15648-15727|CRISPRCasFinder
TGGAATTTACTTAGAAAATAAAAAATAGTTGATTTAACAACGTTTTTAGCCTACTTGGAATTTACTTGGAAAATAAAAAA

>NC_014498|1|1|15648-15727|CRISPRCasFinder
TGGAATTTACTTAGAAAATAAAAAA	TAGTTGATTTAACAACGTTTTTAGCCTACT
TGGAATTTACTTGGAAAATAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_014498.1\|WP_001224760.1\|25018_26287_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|225242
NC_014498.1\|WP_000559720.1\|10597_11098_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_000163933.1\|20134_20704_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|223271
NC_014498.1\|WP_000422982.1\|16643_17498_+\|DNA-damage-inducible-protein-D	unknown	unknown	gnl\|CDD\|183178
NC_014498.1\|WP_000424658.1\|12805_13432_-\|Rha-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226172
NC_014498.1\|WP_000892184.1\|27564_28107_+\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NC_014498.1\|WP_000041909.1\|24530_24899_+\|septum-formation-initiator-family-protein	unknown	unknown	gnl\|CDD\|225471
NC_014498.1\|WP_000516653.1\|11777_12206_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_001218707.1\|18948_20064_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NC_014498.1\|WP_000186206.1\|11491_11641_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_001234978.1\|24271_24538_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109
NC_014498.1\|WP_013315414.1\|13422_14007_-\|Bro-N-domain-containing-protein	unknown	unknown	gnl\|CDD\|214989
NC_014498.1\|WP_001241280.1\|14306_14498_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_014498.1\|WP_000130120.1\|12361_12529_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_013315415.1\|14701_15418_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225484
NC_014498.1\|WP_000171264.1\|10445_10586_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_000438875.1\|11627_11774_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_000258081.1\|20704_24214_+\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NC_014498.1\|WP_000704676.1\|17662_18829_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NC_014498.1\|WP_001208988.1\|26283_27561_+\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950

Protein	Function_ID	Function_description	E-value
NC_014498.1\|WP_000424658.1\|12805_13432_-\|Rha-family-transcriptional-regulator	gnl\|CDD\|226172	COG3646, COG3646, Uncharacterized phage-encoded protein [Function unknown].	4.30011e-39
NC_014498.1\|WP_000163933.1\|20134_20704_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|223271	COG0193, Pth, Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis].	8.8848e-99
NC_014498.1\|WP_000422982.1\|16643_17498_+\|DNA-damage-inducible-protein-D	gnl\|CDD\|183178	PRK11525, dinD, DNA-damage-inducible protein D; Provisional.	3.46591e-127
NC_014498.1\|WP_001234978.1\|24271_24538_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	4.06015e-32
NC_014498.1\|WP_000892184.1\|27564_28107_+\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	4.01916e-97
NC_014498.1\|WP_000258081.1\|20704_24214_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NC_014498.1\|WP_001218707.1\|18948_20064_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NC_014498.1\|WP_001224760.1\|25018_26287_+\|serine-hydrolase	gnl\|CDD\|225242	COG2367, PenP, Beta-lactamase class A [Defense mechanisms].	1.61579e-74
NC_014498.1\|WP_013315414.1\|13422_14007_-\|Bro-N-domain-containing-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	1.93154e-19
NC_014498.1\|WP_001241280.1\|14306_14498_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.83953e-14
NC_014498.1\|WP_013315415.1\|14701_15418_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	6.99525e-15
NC_014498.1\|WP_000041909.1\|24530_24899_+\|septum-formation-initiator-family-protein	gnl\|CDD\|225471	COG2919, COG2919, Septum formation initiator [Cell division and chromosome partitioning].	1.34216e-20
NC_014498.1\|WP_000704676.1\|17662_18829_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	3.08621e-45
NC_014498.1\|WP_001208988.1\|26283_27561_+\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	1.50314e-68

>NC_014498.1|WP_013315415.1|14701_15418_+|helix-turn-helix-domain-containing-protein
MADNIKRLLSAKGLNPRQLAIALDFKYTTVNDWVNAKTYPRIDKIEMLANFFNVSKSDLVENKNAETPTTSPIQSIYDQLTPPRQEKALTYLKKQLLEQKNENIVSENIISLDDYRESKTLPVIGVVTAGNGITQDDNLNMEKCFYTDEIPDDYDAIAYVVGNSMEPKIKNGDYLFIKNTPQVDYNTIGIFQVDGANYVKKLRQGYLESLNPDCADIQLDESNDIRTIGEVVSIYREN
>NC_014498.1|WP_001241280.1|14306_14498_-|helix-turn-helix-transcriptional-regulator
MRLTLKALRANSNMKQSEVAQKLGISTTTWSKWENGKSFPDVAQVKEIEKLFGVAYDDIIFLS
>NC_014498.1|WP_013315414.1|13422_14007_-|Bro-N-domain-containing-protein
MTTQQKDLCDFFGNFYPKGETHNKKEVLEVVTTQRFGSKHFDVYGDIQNPLFVAVEVAEMIEIQNTTDLLKRVDDDEKLTYVISRAGQKREMNMLTEFGVYEVLSQSRKPLAKEFKKVVKHILKEIRLNGYYMAGELVEEPQTTIKAPGTLAEAERYYIDTLAKAIAEAQNMDEKSRLTSKLTRFMQEVEPQWN
>NC_014498.1|WP_000424658.1|12805_13432_-|Rha-family-transcriptional-regulator
MELVYMDGKKEPYTLSSIVAECAEIKHRHLKILLNKHREDFESFGKVQFKISPSESGQNVRDYILNEQQATLLITYLRNTEPVRKFKMNLVKAFFEMRDELSKFRMQRALEKPKRKTLHDSIENWEQAPKHAHSTMNNLLLKAVTDRNAKQLREERGGYNGIDSLTSDELEQYQAFEDMVIAMMGLNMSYQEIKAMAFRNKKTRQRSA
>NC_014498.1|WP_000130120.1|12361_12529_-|hypothetical-protein
MTDKKKMGRPTTDPKNLKMTIRFNDEQSRKIENYASQNNLTKSEVIRKAVEQLPE
>NC_014498.1|WP_000516653.1|11777_12206_-|hypothetical-protein
MGKKHQVVKFKDIAEKLPELEGKRLEEITKVLGYRNLESCRTNLCKLKQNNRLDFTLEKGVYSKFALLDGTVKEELEDKELSERGRYLKSVDRYKAMLNAFSIAFDSTVKAETRQKAEHDGLKALDRIPDKHYALLYDMMEG
>NC_014498.1|WP_000438875.1|11627_11774_-|hypothetical-protein
MEQYTKRASALIITFNRGVISQDEFIEEFTKLREKVVKAVSEAKNDKL
>NC_014498.1|WP_000186206.1|11491_11641_-|hypothetical-protein
MTNYDRAKRFYSRATYVLSDFMHGRIDEQEFRKQWQRLADKAVNETKKN
>NC_014498.1|WP_000559720.1|10597_11098_-|hypothetical-protein
MIADQLKAISTNLEEIQEILVGDGTALAKREISRVLNDLDDVYNELTSTEYREQQETLKEQTERMKQRVVAEVIGGLEEREESYYRNYWGDTKFIKLLSNFDGFLFLNTYLAEITKENTYPMEQSQLLNYVWELIAVDIAKKKRGKKNVLDSWTDSSLYTRGMMID
>NC_014498.1|WP_000171264.1|10445_10586_-|hypothetical-protein
MTLDLGKMTQAEFDEVMADIKARNPNLLQFITDFLDGKVTPGEVDD
>NC_014498.1|WP_000422982.1|16643_17498_+|DNA-damage-inducible-protein-D
MELQQYDELTFENIKHIDENGVEFWYARDLQKTLEYTEWRNFLLVIDKAKIACDTAKNPIVEHFVDVNKSIPNGYNTTRDIKDFKLTRYACYLIVQNGDPRKEVIALGQTYFALKTRQQELQENFDNLTEEQKRLAIRDEIKHHNKSLSESAGNAGVKNFGRFHNSGYKGLYGGLTMQDIHNLKELNEGEHILDFMGSAELAANLFRATQTDEVLRRRNIKGEDLANDTHFNVGRTIRNTMKELGTTMPENLPAPRESIQELKSKQKELEKQDDNNQLSLFDDM
>NC_014498.1|WP_000704676.1|17662_18829_+|site-specific-integrase
MKITEYTKKDGSTVYRSSVYLGIDTVTGKKVKTTISGRTKRELKAKALQAQIDFEKDGSTVYKAVEIKTYAELVENWLETYCHTVKKSTLMGTKFKIDKYLLPAFGNYRLDKLTPPIIQKQVNQWAKDYNQLGKGFQEYPLLHSLNKRILKYAVSLQAIPFNPARDVIVPRRKEKEGQKLKYLDDDNLKKFLTYLEQLPNTYKNFYDTVLYKTLLATGLRIRECLALKWSDIDLKNGTLDVNKTLNIIKEITGPKTKSSIRVIDLDNKTVLMLRLYKARQSQIGKEMGLTYEKVFSNSFDKHIDARMLSFRLVKHLERAGCPRFTFHAFRHTHASILLNAGLPYKEIQTRLGHAKLSMTMDIYSHLSKDNQKNATSFYEKAIEKLKSS
>NC_014498.1|WP_001218707.1|18948_20064_+|redox-regulated-ATPase-YchF
MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDPLADIDTINLELILADLESVNKRYARVEKMARTQKDKESVAEFNVLQKIKPVLEDGKSARTIEFTDEEQKVVKGLFLLTTKPVLYVANVDEDVVSEPDSIDYVKQIREFAATENAEVVVISARAEEEISELDDEDKKEFLEAIGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRAWTFKRGMKAPQAAGIIHSDFEKGFIRAVTMSYEDLVKYGSEKAVKEAGRLREEGKEYIVQDGDIMEFRFNV
>NC_014498.1|WP_000163933.1|20134_20704_+|aminoacyl-tRNA-hydrolase
MTKLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKPTTFMNESGKAVHALLTYYGLDIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQHIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDEYIGILQSVDKVDDSVNYYLQEKNFEKTMQRYNG
>NC_014498.1|WP_000258081.1|20704_24214_+|transcription-repair-coupling-factor
MVTLLDLFSENDQIKKWHQNLTDKKRQLILGLSTSTKALAIASSLEKEDRIVLLMSTYGEAEGLVSDLISILGEELVYPFLVDDAPMVEFLMSSQEKIISRVEALRFLTDSSKKGILVCNIAASRLILPSPNAFKDSIVKISVGEEYDQHAFIHQLKENGYRKVTQVQTQGEFSLRGDILDIFEISQLEPCRIEFFGDEIDGIRSFEVETQLSKENKTELTIFPASDMLLREKDYQRGQSALEKQISKTLSPILKSYLEEILSSFHQKQSHADSRKFLSLCYDKTWTVFDYIEKDTPIFFDDYQKLMNQYEVFERELAQYFTEELQNSKAFSDMQYFSDIEQIYKKQSPVTFFSNLQKGLGNLKFDKIYQFNQYPMQEFFNQFSFLKEEIERYKKMDYTIILQSSNSMGSKTLEDMLEEYQIKLDSRDKTNICKESVNLIEGNLRHGFHFVDEKILLITEHEIFQKKLKRRFRRQHVSNAERLKDYNELEKGDYVVHHIHGIGQYLGIETIEIKGIHRDYVSVQYQNGDQISIPVEQIHLLSKYISSDGKAPKLNKLNDGHFKKAKQKVKNQVEDIADDLIKLYSERSQLKGFAFSADDDDQDAFDDAFPYVETDDQLRSIEEIKRDMQASQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVVILVPTTVLAQQHYTNFKERFQNFAVNIDVLSRFRSKKEQTATLEKLKNGQVDILIGTHRVLSKDVVFADLGLMIIDEEQRFGVKHKETLKELKKQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLEKNDSVIRDAVLREMERGGQVYYLYNKVDTIVQKVSELQELIPEASIGYVHGRMSEVQLENTLLDFIEGQYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPEKSISEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGKSQSGFIDSVGFELYSQLLEEAIAKRNGNANANTRTKGNAELILQIDAYLPDTYISDQRHKIEIYKKIRQIDNRVNYEELQEELIDRFGEYPDVVAYLLEIGLVKSYLDKVFVQRVERKDNKITIQFEKVTQRLFLAQDYFKALSVTNLKAGIAENKGLMELVFDVQNKKDYEILEGLLIFGESLLEIKESKEENSI
>NC_014498.1|WP_001234978.1|24271_24538_+|RNA-binding-S4-domain-containing-protein
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKVLEMKDSTKKEDAAGMYEIISETRVEENV
>NC_014498.1|WP_000041909.1|24530_24899_+|septum-formation-initiator-family-protein
MSKNIVQLNNSFIQNEYQRRRYLMKERQKRNRFMGGVLILIMLLFILPTFNLAQSYQQLLQRRQQLADLQTQYQTLSDEKDKETAFATKLKDEDYAAKYTRAKYYYSKSREKVYTIPDLLQR
>NC_014498.1|WP_001224760.1|25018_26287_+|serine-hydrolase
MRKFLIILLLPSFLTISKVVSTEKEVVYTSKEIYYLSQSDFGIYFREKLSSPMVYGEVPVYANEDLVVESGKLTPKTSFQITEWRLNKQGIPVFKLSNHQFIAADKRFLYDQSEVTPTIKKVWLESDFKLYNSPYDLKEVKSSLSAYSQVSIDKTMFVEGREFLHIDQAGWVAKESTSEEDNRMSKVQEMLSEKYQKDSFSIYVKQLTTGKEAGINQDEKMYAASVLKLSYLYYTQEKINEGLYQLDTTVKYVSAVNDFPGSYKPEGSGSLPKKEDNKEYSLKDLITKVSKESDNVAHNLLGYYISNQSDATFKSKMSAIMGDDWDPKEKLISSKMAGKFMEAIYNQNGFVLESLTKTDFDSQRIAKGVSVKVAHKIGDADEFKHDTGVVYADSPFILSIFTKNSDYDTISKIAKDVYEVLK
>NC_014498.1|WP_001208988.1|26283_27561_+|tRNA-lysidine(34)-synthetase-TilS
MREPDFLNHFLKKGYFKKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAEAELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGTRLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIRNSYLPELEKENPRFRDAILGIGNEILDYDLAIAELSNNINVEDLQQLFSYSESTQRVLLQTYLNRFPDLNLTKAQFAEVQQILKSKSQYRHPIKNGYELIKEYQQFQICKISPQADEKEDELVLHYQNQVAYQGYLFSFGLPLEGESIQQIPVSRETSIHIRHRKTGDVLIQNGHRKKLRRLFIDLKIPMEKRNSALIIEQFGEIVSILGIATNNLSKKTKNDIMNTVLYIEKIDR
>NC_014498.1|WP_000892184.1|27564_28107_+|hypoxanthine-phosphoribosyltransferase
MLENDIKKVLVSHDEITEAAKKLGAQLTKDYAGKNPILVGILKGSIPFMAELVKHIDTHIEMDFMMVSSYHGGTASSGVINIKQDVTQDIKGRHVLFVEDIIDTGQTLKNLRDMFKAREAASVKIATLLDKPEGRVVEIEADYTCFTIPNEFVVGYGLDYKENYRNLPYIGVLKEEVYSN

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Crispr_ID: NC_014498_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014498_2

147974-148069

Orphan

Consensus_repeat	Method
AATGTGTAAGATTTTTATATATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014498_2

>merge|NC_014498|2|147974-148069|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAATTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGAAATGTGTAAAATTTTTATATATAA

>NC_014498|2|2|147974-148069|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAA	TTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGA
AATGTGTAAAATTTTTATATATAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_014498.1\|WP_000198694.1\|147049_147643_-\|DUF1700-domain-containing-protein	unknown	unknown	gnl\|CDD\|227053
NC_014498.1\|WP_000714582.1\|138953_139883_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NC_014498.1\|WP_001030029.1\|142824_143811_+\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|234663
NC_014498.1\|WP_000836442.1\|155120_155708_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|212030
NC_014498.1\|WP_000838912.1\|154207_154879_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	unknown	unknown	gnl\|CDD\|224674
NC_014498.1\|WP_000096194.1\|149318_150479_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133016
NC_014498.1\|WP_000500040.1\|153326_154199_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NC_014498.1\|WP_001230165.1\|156510_156798_+\|lactococcin-972-family-bacteriocin	unknown	unknown	gnl\|CDD\|273735
NC_014498.1\|WP_000273864.1\|147629_147956_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NC_014498.1\|WP_000744895.1\|148094_149261_-\|CynX/NimT-family-MFS-transporter	unknown	unknown	gnl\|CDD\|225365
NC_014498.1\|WP_000200892.1\|152672_153305_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319798
NC_014498.1\|WP_001842468.1\|144143_144947_+\|DUF4299-domain-containing-protein	unknown	unknown	gnl\|CDD\|339103
NC_014498.1\|WP_001035700.1\|150517_152368_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
NC_014498.1\|WP_000808459.1\|145018_146083_-\|membrane-protein	unknown	unknown	gnl\|CDD\|370966
NC_014498.1\|WP_000724262.1\|156849_158958_+\|bacteriocin-associated-integral-membrane-family-protein	unknown	unknown	gnl\|CDD\|273736
NC_014498.1\|WP_000800407.1\|141077_142553_+\|DUF3502-domain-containing-protein	unknown	unknown	gnl\|CDD\|378792
NC_014498.1\|WP_001075102.1\|139896_140820_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NC_014498.1\|WP_001189291.1\|155759_156080_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_001233689.1\|146145_147057_-\|DUF4097-domain-containing-protein	unknown	unknown	gnl\|CDD\|372574
NC_014498.1\|WP_000148249.1\|138284_138635_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_014498.1\|WP_000198694.1\|147049_147643_-\|DUF1700-domain-containing-protein	gnl\|CDD\|227053	COG4709, COG4709, Predicted membrane protein [Function unknown].	3.23104e-64
NC_014498.1\|WP_000714582.1\|138953_139883_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	3.01638e-143
NC_014498.1\|WP_001030029.1\|142824_143811_+\|rhodanese-related-sulfurtransferase	gnl\|CDD\|234663	PRK00142, PRK00142, rhodanese-related sulfurtransferase.	0
NC_014498.1\|WP_000836442.1\|155120_155708_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	5.22512e-13
NC_014498.1\|WP_000838912.1\|154207_154879_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	gnl\|CDD\|224674	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism].	1.1908e-89
NC_014498.1\|WP_000096194.1\|149318_150479_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	3.55607e-109
NC_014498.1\|WP_000500040.1\|153326_154199_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	1.44295e-105
NC_014498.1\|WP_001230165.1\|156510_156798_+\|lactococcin-972-family-bacteriocin	gnl\|CDD\|273735	TIGR01653, hypothetical_protein, bacteriocin, lactococcin 972 family. This model represents bacteriocins related to lactococcin 972. Members tend to be found in association with a seven transmembrane putative immunity protein. [Cellular processes, Toxin production and resistance].	6.91587e-26
NC_014498.1\|WP_000273864.1\|147629_147956_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	3.12912e-19
NC_014498.1\|WP_000744895.1\|148094_149261_-\|CynX/NimT-family-MFS-transporter	gnl\|CDD\|225365	COG2807, CynX, Cyanate permease [Inorganic ion transport and metabolism].	1.15136e-125
NC_014498.1\|WP_000200892.1\|152672_153305_-\|HAD-family-hydrolase	gnl\|CDD\|319798	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065. 5'-nucleotidases dephosphorylate nucleoside 5'-monophosphates to nucleosides and inorganic phosphate. Purified Pseudomonas aeruginosa PA0065 displayed high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.4095e-97
NC_014498.1\|WP_001842468.1\|144143_144947_+\|DUF4299-domain-containing-protein	gnl\|CDD\|339103	pfam14132, DUF4299, Domain of unknown function (DUF4299). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 275 and 313 amino acids in length. There are two conserved sequence motifs: RGF and DAY. There are two completely conserved residues (P and D) that may be functionally important.	8.80291e-113
NC_014498.1\|WP_001035700.1\|150517_152368_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NC_014498.1\|WP_000808459.1\|145018_146083_-\|membrane-protein	gnl\|CDD\|370966	pfam10310, DUF5427, Family of unknown function (DUF5427). This is a domain of unknown function. Family members found in Saccharomyces cerevisiae, are synthetic lethal with genes involved in maintenance of telomere capping. However, experimental evidence is yet to verify the exact function of family members and the domain.	3.51062e-06
NC_014498.1\|WP_000724262.1\|156849_158958_+\|bacteriocin-associated-integral-membrane-family-protein	gnl\|CDD\|273736	TIGR01654, unnamed_protein_product, bacteriocin-associated integral membrane (putative immunity) protein. This model represents a family of integral membrane proteins, most of which are about 650 residues in size and predicted to span the membrane seven times. Nearly half of the members of this family are found in association with a member of the lactococcin 972 family of bacteriocins (TIGR01653). Others may be associated with uncharacterized proteins that may also act as bacteriocins. Although this protein is suggested to be an immunity protein, and the bacteriocin is suggested to be exported by a Sec-dependent process, the role of this protein is unclear. [Cellular processes, Toxin production and resistance].	0
NC_014498.1\|WP_001075102.1\|139896_140820_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.04007e-69
NC_014498.1\|WP_001233689.1\|146145_147057_-\|DUF4097-domain-containing-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	1.39908e-38
NC_014498.1\|WP_000800407.1\|141077_142553_+\|DUF3502-domain-containing-protein	gnl\|CDD\|378792	pfam12010, DUF3502, Domain of unknown function (DUF3502). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 140 amino acids in length. This domain is found associated with pfam01547.	4.24398e-44

>NC_014498.1|WP_000273864.1|147629_147956_-|PadR-family-transcriptional-regulator
MYFPTSSALIEFLILAVLEQGDSYGYEISQTIKLIANIKESTLYPILKKLEGNSFLTTYSREFQGRMRKYYSLTNGGIEQLLTLKDEWTLYTDTINGIIEGSIRHDKN
>NC_014498.1|WP_000198694.1|147049_147643_-|DUF1700-domain-containing-protein
MTRTEYLTQLELYLKKLPEADRIEAMDYFRELFDDAGVEGEEELIASLGTPKEAAHEVLSNLLDKKINEAPAQKNNRQILHIALLALLAAPIGIPLGIAILVTLFAILVAALTVILAFFAVSILGIIGGFLFLVESFTVLAQAKSAFILIFGSGLLAIGASSLVLLGISYVTRFFGLLIVRLVQFVLKKGKRGNQHA
>NC_014498.1|WP_001233689.1|146145_147057_-|DUF4097-domain-containing-protein
MRKWTKGFLIFGVVTTVIGFILLFVGIQSDGIKSLLSMSKEPVYDSRTEKLTFGKEVENLEITLHQHALTITDSFDDQIHISYHPSLSAHHDLITNQNDRTLSLTDKKLSETPFLSSGIGGILHIASSYSSRFEEVILQLPKGRTLKGINISANRGQTTIINASLENATLNTNSYILRIEGSRIKNSKLTTPNIVNIFDTVLTDSQLESTENHFHAENIQVHGKVELTAKDYLRIILDQKESQRINWDISSNYGSIFQFTREKPESRGTELSNPYKTEKTDVKDQLIARSDDNIDLISTPSRR
>NC_014498.1|WP_000808459.1|145018_146083_-|membrane-protein
MKQEWFESNDFVKTTSKNKPEEQAQEVADKAEETIADLDTPIGKNTQVEEEVSQAEVELESQQEEKIETPEVGEARTEIEEKKASNSTEEEPDLSKETEKVTIAEESQEALPQQKATTKEPLLISKSLESPYIPDQDPKSRDKWKEQVLDFWSWLVEAIKSPTSKLETSITHSYTAFLLLILFSASSFFFSIYHIKHAYYGHIASINSRFPEQLAPLTLFSIISILVATTLFFFSFLLGSFVVRRFIHQEKYWTLDKVLQQYSQLLAIPIFLTAIASFFAFFDSLRFTALLCVISIGIILLASLHIITRPSQASETDSFYQLFLSVLVNGVIILLFFVAEVALIGDYLRILAFL
>NC_014498.1|WP_001842468.1|144143_144947_+|DUF4299-domain-containing-protein
MNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLPDLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADAVARFTICQGIFNPIFFSRENLKSFLEADGLAQFEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIDLVQITGDGSKPEDYESIARLDYAKFLEVLPPSFYHQLDANQIEIQPILGQDFKTLAQEK
>NC_014498.1|WP_001030029.1|142824_143811_+|rhodanese-related-sulfurtransferase
MAKDIRVLLYYLYTPIENAEQFAADHLAFCKSIGLKGRILVADEGINGTVSGDYETTQKYMDYVHSLPGMEDLWFKIDEESEQAFKKMFVRYKKEIVHLGLEDNDFDNDINPLETTGAYLSPKEFKEALLDKDTVVLDTRNDYEYDLGHFRGAIRPDIRNFRELPQWVRDNKEKFMDKRVVVYCTGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGNPFCNRRILTSEENEDKYLRGCSHECRVHPRNRYVSKNELTQAEVIERLAAIGESLDQAATV
>NC_014498.1|WP_000800407.1|141077_142553_+|DUF3502-domain-containing-protein
MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLGWGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTELYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQNFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYEVPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVANKDIQIKPITNFIKKNQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENVTDQQIENSKKELAEAKESPALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQKQYDEFLKNKK
>NC_014498.1|WP_001075102.1|139896_140820_+|carbohydrate-ABC-transporter-permease
MAKKKIKKEKIDNVGIHSFSKKADIFFSIISGLIALSCILPFVFVIIISVTDEKSLLQYGYSFFPSQFGLDGFEFLAQFKDKILQALFISVFVTVVGTLTNVFITTTYAYAISRTTFKYRRFFTIFVLLSMLFNAGLVPGYIMVTRVLQLGDTVWALIVPMLLSPFNIILMRSFFKKTIPEAILESARIDGASEARIFFQICLPLSLPGIATITLLTALGFWNDWFNALLYIKSDNLYPLQYLLMQIQQNMDYIAKAVGLTGQLGVALPKETGRMAMVVVATLPIAILYPFFQRYFVKGLTIGGVKE
>NC_014498.1|WP_000714582.1|138953_139883_+|sugar-ABC-transporter-permease
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWVGLDNFRFLFSSRDAFIITRNTVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFYADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADFGLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF
>NC_014498.1|WP_000148249.1|138284_138635_+|hypothetical-protein
MTGVSNPTTDSAPLVLAEAKKAFADDSLTEQGLRDILQTVKDAIASLESIKESQSATKDGGQTAGKETADKDVLENSQEELQKAVLFLADEKGSEHTAAELIDNLKEVIAKLKANA
>NC_014498.1|WP_000744895.1|148094_149261_-|CynX/NimT-family-MFS-transporter
MKKQSLFFVPGIILIGVSLRTPFTVLPIILGNISQGLEVEVSSLGVLTSLPLLMFTLFSPFSTQLAQKIGLEHLFTYSLFFLTIGSLIRLINLPLLYLGTLMVGASVAVINVLLPSLIQANQPKKIGFLTTLYVTSMGIATALASYLAVPITQASSWKGLILLLTLLCLATFLVWLPNHRYNHRLAPQTKQKSQIKVMRNKQVWAIIIFSGFQSLIFYTVMTWLPTMSIHAGLSSHEAGLLTSILSLISIPFSMTIPSLTTSLSTRNRQLMLTLVSLAGVVGISMLFFPINNFIYWLAIHLLIGTATSALFPYLMVNFSLKTSAPEKTAQLSGLSQTGGYILAAFGPTLFGYSFDLFHSWVPAVAALLLIDILMTVALFTVDRADKIL
>NC_014498.1|WP_000096194.1|149318_150479_+|glycosyltransferase-family-2-protein
MSSKVSGFQDKNGKVLKIMIEWWKEKFRRVVVTQNVESLLVSIVISAYNEEKYLPGLIEDLKNQTYPKENIEILFINAMSTDGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVKHSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRPTIVEGKGKWAETLHLVEENMFGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREHGYKIRYSPSILSYQYIRPTFKKMLHQKYSNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLALLPITFVFITLLLGAYFLLLSLLTLLTLLKHKNGFLIVMPFLLFSIHFAYGLGTIVGLIRGFKWKKEYKRTIIYLDKISQINQNMLQ
>NC_014498.1|WP_001035700.1|150517_152368_+|polysaccharide-biosynthesis-protein
MNKKLTDYVIDLVEILNKQQKQVFWGIFDIFSMVVSIIVSYILFYGLINPAPVDYIIYTSLAFLFYQLMIGFWGLNASISRYSKITDFMKIFFGVTASSVLSYSICYAFLPLFSIRFIILFILLSTFLILLPRITWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFMDSYQHPTSELELVGILDKDSKKKGQKLGGIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVETVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQVSRFNPERIVLLGHGENSIYLVYHELIRKFQGIDYVPVIADIQDYDRLLQVFEQYKPAIVYHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGATKRVAELIVTGFNQRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRPGEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFANQTTHIE
>NC_014498.1|WP_000200892.1|152672_153305_-|HAD-family-hydrolase
MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYFQ
>NC_014498.1|WP_000500040.1|153326_154199_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNENKSRSGLTGGDAAKLDHYIKNEKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAGCLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAAALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALAGIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
>NC_014498.1|WP_000838912.1|154207_154879_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta
MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRGHGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHKTISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
>NC_014498.1|WP_000836442.1|155120_155708_+|LysM-peptidoglycan-binding-domain-containing-protein
MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAENNHIDNIHLIYVDQELVIDGPVAPVATPAPATYAAPAAQDETVSAPVAETPVVSETVVSTVSGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNGDYSAENQERVADAYVAGRYGSWTAAKNFWLNNGWY
>NC_014498.1|WP_001189291.1|155759_156080_-|hypothetical-protein
MQRLEVYKNYQRLYDLRIAILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAICYVRIGICTDDSKLIQKGFSLLELTEETSMLSHLKKEVEIYYQAKER
>NC_014498.1|WP_001230165.1|156510_156798_+|lactococcin-972-family-bacteriocin
MRKLVKIGVASLMVCGILATTNALAVWVEGGQWNYGVGWTGTFGYSDYLHSTRYHTATVRHGGRTSKDYAKPEAWARASLTKIPPTGMEYFYGFE
>NC_014498.1|WP_000724262.1|156849_158958_+|bacteriocin-associated-integral-membrane-family-protein
MKKISNFCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEVVKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEMDKDRIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLADVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFNYVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQAGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPNTGIKKVILMPASTKGEEDKNQLLGKLIAFHSMKYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEITELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYRPLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL

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Crispr_ID: NC_014498_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014498_3

1102590-1102672

Orphan

Consensus_repeat	Method
TTCTGGTGTCTGCCACCGCTTGGCCCTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014498_3

>merge|NC_014498|3|1102590-1102672|CRISPRCasFinder
TTCTGGTGTCTGCCACCGCTTGGCCCTTACGTCCAAGATTGCTATCGGATTTTGTTCTGGTGTCCGCCACCGCTTGGCCCTTA

>NC_014498|3|3|1102590-1102672|CRISPRCasFinder
TTCTGGTGTCTGCCACCGCTTGGCCCTTA	CGTCCAAGATTGCTATCGGATTTTG
TTCTGGTGTCCGCCACCGCTTGGCCCTTA

Protein	Signature genes	Signature genes Name	Protein_function
NC_014498.1\|WP_000869763.1\|1112711_1113011_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_000969637.1\|1095363_1095648_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_001859810.1\|1110356_1112234_-\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|226036
NC_014498.1\|WP_000093680.1\|1112233_1112722_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_000387511.1\|1101994_1102405_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_000627865.1\|1110093_1110336_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_001054257.1\|1109222_1110077_-\|conjugal-transfer-protein-TrbL	unknown	unknown	unknown
NC_014498.1\|WP_000155338.1\|1103033_1103642_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181427
NC_014498.1\|WP_000813488.1\|1088750_1090136_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|224588
NC_014498.1\|WP_000453514.1\|1095722_1101947_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|226993
NC_014498.1\|WP_001034978.1\|1091196_1091703_-\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NC_014498.1\|WP_000985015.1\|1090164_1090551_-\|YdcP-family-protein	unknown	unknown	gnl\|CDD\|368761
NC_014498.1\|WP_001097589.1\|1108809_1109169_-\|PrgI-family-protein	unknown	unknown	gnl\|CDD\|378907
NC_014498.1\|WP_000998890.1\|1095053_1095350_-\|hypothetical-protein	unknown	unknown	unknown
NC_014498.1\|WP_000371017.1\|1091695_1092817_-\|ThiF-family-adenylyltransferase	unknown	unknown	gnl\|CDD\|366360
NC_014498.1\|WP_001071847.1\|1093078_1094662_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NC_014498.1\|WP_000653477.1\|1103676_1106490_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|380090
NC_014498.1\|WP_000420682.1\|1090566_1090881_-\|YdcP-family-protein	unknown	unknown	gnl\|CDD\|368761
NC_014498.1\|WP_000824172.1\|1106501_1108859_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274279
NC_014498.1\|WP_000201399.1\|1102867_1103032_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_014498.1\|WP_000155338.1\|1103033_1103642_+\|hypothetical-protein	gnl\|CDD\|181427	PRK08445, PRK08445, dehypoxanthine futalosine cyclase.	0.00920057
NC_014498.1\|WP_000813488.1\|1088750_1090136_-\|DNA-translocase-FtsK	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	4.90599e-31
NC_014498.1\|WP_000453514.1\|1095722_1101947_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|226993	COG4646, COG4646, DNA methylase [Transcription / DNA replication, recombination, and repair].	3.10293e-20
NC_014498.1\|WP_001034978.1\|1091196_1091703_-\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.87406e-22
NC_014498.1\|WP_000985015.1\|1090164_1090551_-\|YdcP-family-protein	gnl\|CDD\|368761	pfam06125, DUF961, Bacterial protein of unknown function (DUF961). This family consists of several hypothetical bacterial proteins of unknown function.	9.54557e-44
NC_014498.1\|WP_001097589.1\|1108809_1109169_-\|PrgI-family-protein	gnl\|CDD\|378907	pfam12666, PrgI, PrgI family protein. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 116 and 146 amino acids in length. This protein is found in an operon that is part of a Type IV secretion system.	8.01688e-15
NC_014498.1\|WP_001859810.1\|1110356_1112234_-\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|226036	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion].	4.38371e-58
NC_014498.1\|WP_000371017.1\|1091695_1092817_-\|ThiF-family-adenylyltransferase	gnl\|CDD\|366360	pfam00899, ThiF, ThiF family. This domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1.	9.52653e-32
NC_014498.1\|WP_001071847.1\|1093078_1094662_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.16677e-60
NC_014498.1\|WP_000653477.1\|1103676_1106490_-\|CHAP-domain-containing-protein	gnl\|CDD\|380090	pfam18013, Phage_lysozyme2, Phage tail lysozyme. This domain has a lysozyme like fold. It is found in the tail protein of various phages probably giving them the ability to degrade the host cell wall peptidoglycan layer.	8.60411e-37
NC_014498.1\|WP_000420682.1\|1090566_1090881_-\|YdcP-family-protein	gnl\|CDD\|368761	pfam06125, DUF961, Bacterial protein of unknown function (DUF961). This family consists of several hypothetical bacterial proteins of unknown function.	7.00664e-46
NC_014498.1\|WP_000824172.1\|1106501_1108859_-\|hypothetical-protein	gnl\|CDD\|274279	TIGR02746, hypothetical_protein, type-IV secretion system protein TraC. The protein family described here is common among the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The protein conyains the Walker A and B motifs and so is a putative nucleotide triphosphatase.	1.42927e-14

>NC_014498.1|WP_000387511.1|1101994_1102405_-|hypothetical-protein
MEAIYQRDSDQDGLTDAQELALGTNPLSADSDGDGRSDLVEVEEGTNPLEKDLQDIDQTSITEPSSVFMEMKQKISDMMESHYKEFIQALISIETGIENQQDLEDLYTYYMRTDSVSLLSSDLETSPQEVEMEIEL
>NC_014498.1|WP_000453514.1|1095722_1101947_-|DEAD/DEAH-box-helicase-family-protein
MEVMQLLAMFRGTIPKDREKMDLFLRYQAQHFDEKWQDLVESFLAEEGKIEEIPHVYSFDQDIVSFLEASSENNDQDLESYTRNFGQAGLSKLSQLSSWEKNLVLEVATYNLSTRFYIQSEKEKLEPLSELVFHQNQDVNLVNVYRVANNLSDRVSRDIEEFLLMVDSKELKKEVLEIHFEEKEGDVLAYLGSELVATLDTVTDLVHHEENYQQLPLTQKLKIITHFDDVKARSEKSNQVEEVLSPSSGIEQETEETNSFSNVDKIVEEALKEYPIGSQVSYKGQVFQLVSIENAQLNDLVRLELFNDSNQLFEENPILYLNTLEEIEQVLSLVELEKEDSEIEIDSSSKSQEIDLFSYLEEENENEKDKDKETKPLISGIKETDVPVQDFVFPDDLEDFYPKTNREKIETNIAAIELVKRLEKEGRQASPEEQELLAKYVGWGGLANEFFDELNPKYEAERLTLKSLVSKSEYSTMKQSSLTAYYTDPMIIRQIWQKLLDDGFEGGRILDPSMGTGNFFAAMPRSIREKSELYGVELDSVTGAIAKQLHPNTHIEVRGFEEVPYQNNSFDLVLTNVPFGNFRIADKNYDRPYMIHDYFVKHSLDLVRDGGQVSIISSIGTMDKRTDNVLQEIKSSTHFLGGVRLPDTAFKKIAGTRVTTDLLFFQKDQAKNLHEEELVFSGSIPFEEDKRVWINPYFDGKYNTQVLGQYEVRNFNGGTLNVKGESETFTTDIMEALENVEAPKPIDNSLKEPVFIQEKVDHSIPSRIRENLALYSFGYEGNQIYYRDTHGIRKSSKVDEISYYVDEKGEFKAWDSSLSEHKIDRFVQLHLTDEEALDVYKSEEASKRGKYKGLFKKTVFYESPLSDKDISRIKGMVDLRETYQSLIEIQRHQDYSRTDFQVLLSKLNRDYDRFVSQFGYLNASVNRNLFDSDDKYSLLASLEDEYIDSKDQKVKYKKSLAFEKALVRPERVIARVSTALDAVNSSLSDGRGVDLDYMVSIYPEHSQAAILDELGDQVLMDPESYLRGERKYLSKNQFLSGDILNKIEVVQLLVEENNQECDWSHALDLLESVRPPRIHLADIEFKIGSRWIPQSVYGKFAFECFTNREFELSSPDVEQVIEVNPVDGQVHLKTSFAYRYPSAKDSSLGVSGSRYDTGRKIFENLLNSNQPTITMTVTEGEKKKTITDLEKTSVLRAKEQHLQELFQEFVSRYPEVQQVIEESYNRLYNRTVSREYDGSHLVIDGLAQNISLRPHQENAIQRIVEEKRALLAHEVGSGKTLTMLGAGFKLKELGMVHKPLYVVPSSLSAQFGQEIMKFFPTKKVFVTTKKDFVKSRRKQFVSRIITGDYDAIVIGDSQFEKIPVSKERQMNYIEDKLNELREIKTHSENKYTVKEAEQSISGLEKQLEELQRFNRDSFIDFENLGIDFLFVDEAHHFKNIRPITGLGNVAGITNTTSKKNVDMEMKVRQIQEEHDFKNIVFATGTPVSNSISELYTMMNYIQPDILKRYQVDYFDSWVGAFGEIQNSMELAPTGDKYQPKKRFKKFVNLPELMKIYKETADIQTQDMLDLPVPEAHIIPIESELTENQKLYLEELVMRSDMVKCGTVDPSQDNMLKITGEARKLAIDMRLLDSSYSLADNHKLLQVVDNVERIYREGMGNKATQMIFSDIGTPKKKDNGFDVYSEIKALLVDRGIPSKEIAFVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRIIRQGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTSKEPIRAAEDIDEQTMTASDFKALATGNPYLKYKMELENDLTLLENQRRAFQRSKDHYRHTISYCEENMPILEKRLSKYEGDIQQSEMSKDQAFSMTVGKQAFEQRAEAGESLHRLIRHNQSDSKEFRTLASYRGFDIKMLSLPTNQPLPETFSVKIVGENQYSVSLDLYSPLGTIQRLQHTIDHIKDDQVKTQNLLDELKDKWTTAKVEIEKNFPKEEDYQTKKAEYDVLAPLIETETDLDIIDQALRQFHEKGKEKQEQLSFELD
>NC_014498.1|WP_000969637.1|1095363_1095648_-|hypothetical-protein
MMEDTYYQLEEALVQGFQTPEEYQAYKELKEHYEEVTGDYSFSKRELTSQLEIALQNHQGVDFEEHEKEEYLDLVQKLEEFDSSLATHYRQLID
>NC_014498.1|WP_000998890.1|1095053_1095350_-|hypothetical-protein
MNDLLLIPVIFLAVGGILILLWRLFLIASGLFLIGFISFLIFVEVYGIYLFFTEPSLYFDDIRQHGLTSFTAVYFFINLMLVLGFSWRFINSINKHKM
>NC_014498.1|WP_001071847.1|1093078_1094662_-|ABC-transporter-ATP-binding-protein
MNQIMKQYKLLYFLIILLSLTSALLMTFFSLQLGRILDSISNSNSGLLFHITISVGSILLWFLISSSYSYLKNEYVKKVILDLKRRLLLHYLSREFNQTDNRNHSDFLNNITKNSDLIQENLLIPKISLIANLGSLIMSVVAIIYIEWRLALVFLLLSSITVFLSQIPGKLMTKSTNNYSLQNNHYLSKMTNFINGFEQIKLLNIQSWTQEKIQGISLEFEESRKTYQFLKDLASTTGILLSFGSQLSCMVAGIFFVRNNLLTIGLLVASIQLLNGVFAPLQSILYNKNLISSSKSIIDNIQENLYETNQGTSHKTSTIDCDNISTISISQLHYEIENKILFDHFSYEFKKGKRYAIIGASGAGKTTLVKLILNYYPKNLYDGEIKINGKQNIDISSEELYKDIAFVQKNDFLIEGNILENIKLARNLHLTEKLRKSLGFNEDFLRKNLAQSNQIISEGEKQRIDLARFLVKTYSVYIFDEPTSNLDPIKAKEIMDYILSIKDAIVIVITHDQNPEILEEFDQIIVL
>NC_014498.1|WP_000371017.1|1091695_1092817_-|ThiF-family-adenylyltransferase
MDNYFPKWNQDRIVYQWKNDRLRIGADDVDVLEITGYSDFWSDLISCCNGINSFEEIKDLLRKKYDISENIIEKYISKFSDRNLLEILDRPVNQIDHYLINESLETYYSSEGIGGIKLLEKLSNLKVTILGCGAGGSHIALQLAQLGVGRLHLVDDDIVKENNINRQSMFTFNDIGKYKVDCVKDCILKRNYQCVVTKRKLKMSTVDAVKKEISESDWVFCCMDEPPYIAQRLVNRACYLFNIPSIYCFSQRSAGKLLFCNPNIQNIGCVDCLLYEQDSDNFQNLVKKFSNYDGKLITANILTNILLLSSWVVKKWLDCVTEKNSNVWNTLFRFDFYSFREDEFKHFSKQSHCPTCGHDFDKSKLWEILKIDE
>NC_014498.1|WP_001034978.1|1091196_1091703_-|insulinase-family-protein
MNKKIIFKKNQASKFAYFSLMFVAGTSIEQVNELGFSHLIEHLLIRAGNEQSLNELFDMNGAAIKGETSRDYINLSGYCLAEDFNKIFKILISRIFNLSITEDELLREKKIVLIELNQYENSKKSINDNRVIFKNSSWSIDIIGTRGNIEYVSLETIYKFYIKNSIKI
>NC_014498.1|WP_000420682.1|1090566_1090881_-|YdcP-family-protein
MELKFVIPNMEKTFGNLEFAGEDKVVQRRINGRLTVLSRSYNLYSDVQRADDIVVVLPAEAGEKHFGFEERVKLVNPRITAEGYKIGTRGFTNYLLHADDMIKE
>NC_014498.1|WP_000985015.1|1090164_1090551_-|YdcP-family-protein
MMRLANGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKKEPTQDK
>NC_014498.1|WP_000813488.1|1088750_1090136_-|DNA-translocase-FtsK
MKQRGKRIRPSGKDLVFHFTIASLLPVFLLVVGLFHVKTIQQINWQDFNLSQADKIDIPYLIISFSVAILICLLVAFVFKRVRYDTVKQLYHRQKLAKMILENKWYESEQVKTEGFFKDSAGRTKEKITYFPKMYYRLKNGLIQIRVEITLGKYQDQLLHLEKKLESGLYCELTDKELKDSYVEYTLLYDTIASRISIDEVEAKDGKLRLMKNVWWEYDKLPHMLIAGGTGGGKTYFILTLIEALLHTDSKLYILDPKNADLADLGSVMANVYYRKEDLLSCIETFYEEMMKRSEEMKQMKNYKTGKNYAYLGLPAHFLIFDEYVAFMEMLGTKENTAVMNKLKQIVMLGRQAGFFLILACQRPDAKYLGDGIRDQFNFRVALGRMSEMGYGMMFGSDVQKDFFLKRIKGRGYVDVGTSVISEFYTPLVPKGYDFLEEIKKLSNSRQSTQATCEAEVAGVD
>NC_014498.1|WP_000201399.1|1102867_1103032_+|hypothetical-protein
MATISLTRDIKLTNEDALKILNHKPSKKLQAVLKSIESQDATAPTKNKLISKYL
>NC_014498.1|WP_000155338.1|1103033_1103642_+|hypothetical-protein
MTIQVTPLKQYLENIQVLAPDKTEKQVQDLFKTIILENVDFNGNEEMLTYLSDKAPNFEKQHRSRNFIVEETETNNIIGFFSLSLKVVDISDLEKSLKKKLVLKGKSPKNIDYLPVLLIGQFGKNTKLNKLSGQELFEIVIQKIEEFRAIVGTQMVFLDSINHPKVIQFYEQFGFVAYSQLIKDDHQVSYQPMALNMSLYKK
>NC_014498.1|WP_000653477.1|1103676_1106490_-|CHAP-domain-containing-protein
MKDKRKIIRARKAFRRSLKDEKKFLKKGKKEVRKQKKDSAVLDEKAWKKEIKQKLEEMREASKERVKQANEDYNHILQNSPPSLLNRKELRDRRLPHARKRLKIAKKQFREAKVEAKEERKESRKERKTNQKFLYGQESKQKSNFFFQGKSLEELKAKKEVKAAKENLKSTKQAYKSKKVSRKAKTFLYVLGREGGELASENEDLEGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATGRFTKKRLTNTKERYHHFKDGKGWKLAKDKPSSFKNRFRKLKKQGLTSVRNIYQKLKAAFSFFTFAAGNPVTWIVGGIVFLLLLIMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTRTNDKGITYYTKVDDVMGYMNFKFHDYELHKPVHLFSSETYKDYLSTLWHDLNDGEDLKSMQDLYESPKYKLSKDDQEEIKELKEEGVYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDGKPTLQEYILLEAKVHQTIVAPMDGVVSLDGDDVILTNGKGENESRLTLYSIHNGRAIEGTRVLTGDIIGETPDDTGLKVSYQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGDEFERAKHIYEFLKSQGASPQAIAAILGNWSVESSINPKRAEGDYLSPPVGATDSSWDDESWLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYARTQNKKWYDLDLQLDFMLHGDSPYYQSWLKDFFKNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGFSQTNGGQAKSDPQSLEGVRGDLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRNGEKISIINTMGNGQDWVATASSLGGETGSTPRAGAIVSFVGGTHGTPAIYGHVAFVEKVYDDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK
>NC_014498.1|WP_000824172.1|1106501_1108859_-|hypothetical-protein
MKRKSNTLKKQKTSMTNKKEKVKGKKEEVLPSTANTLSYQALYQNGLMQVKEDYFSQSYLLGDVNYQTVGLEDKGAIIEKYSDLINSLDDQTNFQLTIFNKRLNLEKFRQSVLYEEKEDGYDSYRQELNRMMNQNLDSGENNFSAVKLISFGRKDSNPKQAYRSLSQIGEYFKSGFSEIDARFESLAGEERVNLLADMLRGEHHLPFSYRDLTRSGQTTRHFIAPNLLDFKNKNYLQINDRLLQIVYVRDYGMELGDQFIRDLMQGDLELIVSLHAQSSTKADAMKKLRTKKTLMESQKIGEQQKLARTGIYLEKVGHVLESNIDEAEELLKTMTETGDKLFQTVFLIGVFGQDEEELKQALDTIQQVAGSNDLMIDKLPYMQEAAFNSLLPFGCDFLEGVSRSLLTSNVAVNSPWTSVDLQDRSGKYYGINQISSNIITIDRSLLNTPSGLILGTSGAGKGMATKHEIITTKIKESGENTEIIIVDPEAEYSVIGRAFGGEMIDIAPDSQTYLNVLDLSEENMDEDPVKVKSEFLLSFIGKLLDRKMDGREKSIIDRVTRLTYQSFKEPSLEEWVFVLSQQPEEEAQNLALDMELYVEGSLDIFSHKTNIQTGSNFLIYNVKKLGDELKQIALMVVFDQIWNRVVRNQKLGKKTWIYFDEMQLLLLDKYASDFFFKLWSRVRKYGASPTGITQNVETLLLDPNGRRIIANSEFMILLKQAKNDREELVQLLGLSKELEKYLVNPEKGAGLIKAGSVVVPFKNKIPQGTQLFDIMSTDPDKMASN
>NC_014498.1|WP_001097589.1|1108809_1109169_-|PrgI-family-protein
MNTRVFKDISKYQHRAWLGFTTRQIIFVLPAFIVTIIVLGLNLFFWQFGDWFVYGFVFAFTIPLMLFGVYKPNDLYFEHYLKYRLHFELTVPLRTITGKKGPEHEKKIKYIKETKNFND
>NC_014498.1|WP_001054257.1|1109222_1110077_-|conjugal-transfer-protein-TrbL
MNLSLVSPFVYLASEKISAENLFEGFNVDLQSTVDLIKSLSSYNPTVWTYMSSITKSVMQPLGVAILSVVLILEFSKMAKKIANSGGAMTFEALAPMLISYIMVAVVITNTTVIVEAIIGIASHAIEQVASIVAHGGAKYDTISGLKGSGFIGRMIVGFFALLIWLVRIVSAAMVNLLVSIRFIQLYLMIPFAPLTIPTFLSDEWKSIGIGYLKNIMVYAVQGVLIFLIVSLVPLFESAGKIAVSNGAGVLQSLAIMFGSLVQAILLIIALVGSQRTARSILGM
>NC_014498.1|WP_000627865.1|1110093_1110336_-|hypothetical-protein
MITHFKGFVYGVDASAMFAQAMSLLQKGLIAVGAFLVVVGIVNLATNIKDGGPGVRNAILEIVGGVMVGAAGAFVTQISI
>NC_014498.1|WP_001859810.1|1110356_1112234_-|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MYSGKKFLLFSLLGILLGYLFHRLTLLYDSYTGNTLDKWTHLLMEGQDEVLQSPWNVSFTGKSSAFFLLGFVMMLLVYLYLETGKKQYREGVEYGSARFGTLKEKKLFYGKEFSHDTILAQDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKTFRFVKPNLIQMNSSNIVVDPKDHLAEKTGKLFLERGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSGSRSDPFWDEASMTLVRALASYLVDFYNPPKTREQLIEESRLSQKEYQNLLKRQKKEVEERKKRGRYPSFAEISKLIKHLSKGENQEKSVLEILFENYAKKYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVMDLTKRDTLDMKTWGQEKSMVYLVIPDNDSTFRFLSALFFSTVFQTLTRQADIDFKGQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEIGNMKRHECLVRIANMPVFKSKKYYSTKHPNWKYLANQETDERWWNYQINPLNQRQENHLEGLRIRDLTFESSLK
>NC_014498.1|WP_000093680.1|1112233_1112722_-|hypothetical-protein
MSSEQQERMAVQYAERSLLFTVKSLLKILEWSRRQALAQDSAYKIGVQKLEELLQSPYSIDTINLKKDFLDKPIDIEKFKAFLEKEEIPLAIAWQGDSLHFYTKDRSILDNHLEHLLEKMVNDPDKLADFTMDKSLDDAIDEAKSQITFRQEGAVKQKEMVR
>NC_014498.1|WP_000869763.1|1112711_1113011_-|hypothetical-protein
MKVVNLYDLKQMGNKGGCTIQLIHHFPFGMGLGHLKKDYIEFKRVGIVDGKAVEVTLREPYSRDLLQVVKSIKQRQKLIAYRYKEGKLLFVKKEASDVL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448641	Streptococcus satellite phage Javan753, complete genome	2187-2216	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448433	Streptococcus satellite phage Javan328, complete genome	2779-2808	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448628	Streptococcus satellite phage Javan741, complete genome	3052-3081	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448615	Streptococcus satellite phage Javan728, complete genome	3051-3080	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448420	Streptococcus satellite phage Javan309, complete genome	2778-2807	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448620	Streptococcus satellite phage Javan733, complete genome	3053-3082	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448614	Streptococcus satellite phage Javan727, complete genome	3128-3157	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448640	Streptococcus satellite phage Javan752, complete genome	1927-1956	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448619	Streptococcus satellite phage Javan732, complete genome	3128-3157	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448610	Streptococcus satellite phage Javan723, complete genome	2638-2667	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448623	Streptococcus satellite phage Javan736, complete genome	2108-2137	0	1.0
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448889	Streptococcus phage Javan262, complete genome	13152-13181	6	0.8
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448672	Streptococcus phage Javan117, complete genome	25572-25601	7	0.767
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	MK448849	Streptococcus phage Javan128, complete genome	24992-25021	7	0.767
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	NZ_CP015129	Lactobacillus plantarum strain CAUH2 plasmid pCAUH203, complete sequence	5128-5157	8	0.733
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	NZ_CP032661	Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence	8387-8416	8	0.733
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	NZ_CP032661	Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence	22240-22269	8	0.733
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	NC_021520	Lactobacillus plantarum 16 plasmid Lp16L, complete sequence	1702-1731	8	0.733
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	NZ_CP028234	Lactobacillus plantarum strain SRCM101222 plasmid unnamed5, complete sequence	12877-12906	8	0.733
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	NZ_CP028246	Lactobacillus plantarum strain SRCM101518 plasmid unnamed5, complete sequence	8549-8578	8	0.733
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	NZ_CP020099	Lactobacillus plantarum strain K25 plasmid unnamed6, complete sequence	8125-8154	8	0.733
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	NZ_CP032657	Lactobacillus pentosus strain ZFM222 plasmid unnamed3, complete sequence	8799-8828	8	0.733
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	NZ_CP013154	Lactobacillus plantarum strain MF1298 plasmid pMF1298-7, complete sequence	6717-6746	8	0.733
NC_014498_1	1.1\|15673\|30\|NC_014498\|CRISPRCasFinder	15673-15702	30	NZ_CP054260	Lactobacillus plantarum strain TCI507 plasmid unnamed1	7422-7451	8	0.733

1. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448641 (Streptococcus satellite phage Javan753, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

2. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448433 (Streptococcus satellite phage Javan328, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

3. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448628 (Streptococcus satellite phage Javan741, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

4. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448615 (Streptococcus satellite phage Javan728, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

5. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448420 (Streptococcus satellite phage Javan309, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

6. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448620 (Streptococcus satellite phage Javan733, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

7. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448614 (Streptococcus satellite phage Javan727, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

8. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448640 (Streptococcus satellite phage Javan752, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

9. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448619 (Streptococcus satellite phage Javan732, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

10. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448610 (Streptococcus satellite phage Javan723, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

11. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448623 (Streptococcus satellite phage Javan736, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

12. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448889 (Streptococcus phage Javan262, complete genome) position: , mismatch: 6, identity: 0.8

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacattttttgctgctt	Protospacer
****************.***** **.  .*

13. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 7, identity: 0.767

tagttgatttaacaacgtttttagcctact	CRISPR spacer
ttgttgatttaacaatgtttttggcagctt	Protospacer
* *************.******.**   .*

14. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 7, identity: 0.767

tagttgatttaacaacgtttttagcctact	CRISPR spacer
ttgttgatttaacaatgtttttggcagctt	Protospacer
* *************.******.**   .*

15. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to NZ_CP015129 (Lactobacillus plantarum strain CAUH2 plasmid pCAUH203, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

16. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to NZ_CP032661 (Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

17. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to NZ_CP032661 (Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

18. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to NC_021520 (Lactobacillus plantarum 16 plasmid Lp16L, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

19. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to NZ_CP028234 (Lactobacillus plantarum strain SRCM101222 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

20. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to NZ_CP028246 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

21. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to NZ_CP020099 (Lactobacillus plantarum strain K25 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

22. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to NZ_CP032657 (Lactobacillus pentosus strain ZFM222 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

23. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to NZ_CP013154 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-7, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

24. spacer 1.1|15673|30|NC_014498|CRISPRCasFinder matches to NZ_CP054260 (Lactobacillus plantarum strain TCI507 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

17662 : 66440

Streptococcus_phage(92.59%)

integrase,capsid,terminase,tRNA,protease

attL 39374:39394|attR 77823:77843

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000704676.1\|17662_18829_+\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	2.0e-103	51.5
WP_001218707.1\|18948_20064_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_000163933.1\|20134_20704_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_000258081.1\|20704_24214_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_001234978.1\|24271_24538_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_000041909.1\|24530_24899_+	septum formation initiator family protein	NA	NA	NA	NA
WP_001224760.1\|25018_26287_+	serine hydrolase	NA	NA	NA	NA
WP_001208988.1\|26283_27561_+\|tRNA	tRNA lysidine(34) synthetase TilS	A7K9Y8	Acanthocystis_turfacea_chlorella_virus	2.5e-06	24.1
WP_000892184.1\|27564_28107_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	2.7e-10	28.9
WP_000744557.1\|28122_30081_+\|protease	ATP-dependent zinc metalloprotease FtsH	H8ZJI5	Ostreococcus_tauri_virus	3.2e-109	45.8
WP_000588864.1\|30202_30682_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_000939547.1\|37525_37762_+	hypothetical protein	NA	NA	NA	NA
WP_000205044.1\|37992_39279_+	adenylosuccinate synthase	L7Y4J5	Megavirus	2.7e-72	37.1
39374:39394	attL	NA	NA	NA	NA
WP_000876735.1\|39520_40669_-\|integrase	site-specific integrase	A0A141E192	Streptococcus_phage	2.1e-217	100.0
WP_000690124.1\|40840_41755_-	HIRAN domain-containing protein	E8ZDT3	Streptococcus_phage	1.1e-155	100.0
WP_001100508.1\|41767_42502_-	helix-turn-helix domain-containing protein	E8ZDN4	Streptococcus_phage	6.1e-138	100.0
WP_000248658.1\|42667_42883_+	transcriptional regulator	E8ZDN3	Streptococcus_phage	2.7e-30	100.0
WP_001002364.1\|42910_43621_+	ORF6C domain-containing protein	E8ZDT0	Streptococcus_phage	7.4e-133	100.0
WP_000370959.1\|43633_43891_+	hypothetical protein	A0A1S5SEV6	Streptococcus_phage	1.2e-43	100.0
WP_000462828.1\|43976_44297_+	hypothetical protein	A0A1S5SCY0	Streptococcus_phage	1.9e-48	100.0
WP_000391813.1\|44312_44609_+	hypothetical protein	A0A1S5SDE3	Streptococcus_phage	6.2e-49	100.0
WP_001289772.1\|44601_45408_+	phage replisome organizer N-terminal domain-containing protein	A0A1S5SDA2	Streptococcus_phage	8.5e-125	100.0
WP_000538418.1\|45395_45554_+	hypothetical protein	A0A1S5SEV3	Streptococcus_phage	2.8e-24	100.0
WP_000228212.1\|45547_46318_+	ATP-binding protein	A0A1S5SD12	Streptococcus_phage	2.3e-140	100.0
WP_000470343.1\|46332_46527_+	hypothetical protein	A0A1S5SGB5	Streptococcus_phage	1.6e-29	100.0
WP_000975313.1\|46526_47201_+	site-specific DNA-methyltransferase	A0A1S5S9L2	Streptococcus_phage	1.9e-133	100.0
WP_000933621.1\|47210_47429_+	hypothetical protein	A0A1S5SCZ1	Streptococcus_phage	2.1e-38	100.0
WP_001097109.1\|47428_47734_+	hypothetical protein	A0A1S5SF94	Streptococcus_phage	1.0e-51	100.0
WP_000233204.1\|47824_47992_+	hypothetical protein	A0A1S5SF87	Streptococcus_phage	3.9e-24	100.0
WP_000872731.1\|47978_48188_+	hypothetical protein	A0A1S5SFD0	Streptococcus_phage	1.9e-28	100.0
WP_000969682.1\|48159_48477_+	hypothetical protein	A0A1S5SDB3	Streptococcus_phage	7.8e-58	100.0
WP_001041157.1\|48478_49153_+	DUF1642 domain-containing protein	A0A1S5SD64	Streptococcus_phage	4.0e-128	100.0
WP_000194859.1\|49152_49440_+	hypothetical protein	A0A1S5SD24	Streptococcus_phage	3.0e-48	100.0
WP_001277861.1\|49439_49628_+	hypothetical protein	A0A1S5S928	Streptococcus_phage	5.5e-27	100.0
WP_000119456.1\|49624_49963_+	hypothetical protein	A0A1S5SDB9	Streptococcus_phage	4.7e-61	100.0
WP_001252173.1\|49964_50225_+	DUF1372 family protein	A0A1S5SAN2	Streptococcus_phage	4.4e-43	100.0
WP_000340952.1\|50224_50683_+	hypothetical protein	X2KU19	Streptococcus_phage	3.6e-72	100.0
WP_001813036.1\|50796_51075_+	hypothetical protein	A0A1S5SG07	Streptococcus_phage	8.1e-43	100.0
WP_000612379.1\|51086_51494_+	hypothetical protein	A0A1S5SCZ9	Streptococcus_phage	1.1e-77	100.0
WP_001067623.1\|51493_51730_+	DUF3310 domain-containing protein	A0A141E175	Streptococcus_phage	2.1e-39	100.0
WP_000005959.1\|51722_51899_+	hypothetical protein	A0A141E174	Streptococcus_phage	3.7e-25	100.0
WP_000998323.1\|51891_52122_+	helix-turn-helix transcriptional regulator	A0A1S5SG49	Streptococcus_phage	1.8e-35	100.0
WP_001165370.1\|52194_52623_+	transcriptional regulator	E8ZDR4	Streptococcus_phage	4.6e-69	100.0
WP_000754954.1\|52912_53479_+\|integrase	site-specific integrase	A0A141E172	Streptococcus_phage	9.9e-104	100.0
WP_001095652.1\|53712_54057_+	HNH endonuclease	E8ZDL6	Streptococcus_phage	1.2e-64	100.0
WP_000172768.1\|54195_55659_+	hypothetical protein	E8ZDR0	Streptococcus_phage	2.9e-280	100.0
WP_000228949.1\|55651_57043_+	hypothetical protein	E8ZDQ9	Streptococcus_phage	1.5e-265	100.0
WP_000834149.1\|57032_57272_+	hypothetical protein	A0A1S5SD22	Streptococcus_phage	1.2e-42	100.0
WP_000528517.1\|57324_57555_+	hypothetical protein	A0A1S5SGD0	Streptococcus_phage	6.7e-35	100.0
WP_000101481.1\|57605_59018_+\|terminase	terminase	A0A126GGI1	Streptococcus_phage	2.3e-279	100.0
WP_001288686.1\|59100_59565_+	DUF4355 domain-containing protein	A0A126GGH5	Streptococcus_phage	8.4e-77	100.0
WP_000774647.1\|59571_60468_+\|capsid	phage major capsid protein	A0A126GGI3	Streptococcus_phage	3.1e-168	100.0
WP_001240370.1\|60473_60686_+	hypothetical protein	A0A1S5SD43	Streptococcus_phage	1.4e-31	100.0
WP_000536419.1\|60689_61130_+	phage Gp19/Gp15/Gp42 family protein	A0A126GGH6	Streptococcus_phage	5.2e-76	100.0
WP_000221694.1\|61074_61413_+	hypothetical protein	A0A1S5SDD8	Streptococcus_phage	1.4e-60	100.0
WP_001281959.1\|61405_61642_+	hypothetical protein	A0A1S5SD20	Streptococcus_phage	9.9e-34	100.0
WP_000571659.1\|61638_61974_+	hypothetical protein	A0A1S5SG59	Streptococcus_phage	3.1e-57	100.0
WP_000205999.1\|61989_62598_+	hypothetical protein	E8ZDP8	Streptococcus_phage	3.2e-108	100.0
WP_000391234.1\|62603_62879_+	hypothetical protein	E8ZDK2	Streptococcus_phage	1.2e-43	100.0
WP_000560880.1\|62890_63277_+	DUF5361 domain-containing protein	E8ZDP6	Streptococcus_phage	1.6e-65	100.0
WP_000179969.1\|63276_65742_+	hypothetical protein	A0A141E161	Streptococcus_phage	1.0e-253	100.0
WP_000499602.1\|65741_66440_+	adenylosuccinate synthetase	E8ZDP4	Streptococcus_phage	2.5e-133	100.0
77823:77843	attR	NA	NA	NA	NA

DBSCAN-SWA_2

74629 : 79025

Streptococcus_phage(75.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001091119.1\|74629_74833_+	hypothetical protein	X2KU40	Streptococcus_phage	1.1e-25	100.0
WP_000852237.1\|74835_75186_+	hypothetical protein	A0A1S5SD29	Streptococcus_phage	6.2e-64	100.0
WP_001165344.1\|75195_75612_+\|holin	phage holin family protein	A0A1S5SCE8	Streptococcus_phage	1.9e-67	100.0
WP_001186227.1\|75615_75951_+\|holin	phage holin	A0A1S5SD41	Streptococcus_phage	1.5e-51	100.0
WP_000350508.1\|75950_76907_+	N-acetylmuramoyl-L-alanine amidase LytA	A0A1S5SD25	Streptococcus_phage	7.9e-162	100.0
WP_001209433.1\|77176_77356_-	hypothetical protein	Q3BLW4	Phage_SK137	3.5e-23	96.6
WP_192928359.1\|77357_77648_-	hypothetical protein	C5J952	Streptococcus_phage	3.0e-16	93.9
WP_000291877.1\|77928_78396_+	nucleoside deaminase	NA	NA	NA	NA
WP_000701992.1\|78581_79025_+	dUTP diphosphatase	Q2WG49	Clostridium_botulinum_D_phage	2.1e-29	47.3

DBSCAN-SWA_3

94420 : 105876

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000668303.1\|94420_96574_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	2.7e-45	28.2
WP_000801617.1\|96586_97936_+	HlyD family secretion protein	NA	NA	NA	NA
WP_000043306.1\|98105_98813_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D8KNF0	Synechococcus_phage	1.3e-41	39.2
WP_000361167.1\|99014_102740_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	5.6e-38	25.9
WP_000220633.1\|102832_104275_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.7e-55	35.1
WP_000182575.1\|104311_105334_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	1.2e-64	43.9
WP_000717504.1\|105330_105876_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.2e-23	34.4

DBSCAN-SWA_4

156510 : 184397

Planktothrix_phage(100.0%)

bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001230165.1\|156510_156798_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
WP_000724262.1\|156849_158958_+\|bacteriocin	bacteriocin-associated integral membrane family protein	NA	NA	NA	NA
WP_000571330.1\|158954_159596_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-23	34.8
WP_001038474.1\|159802_160609_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_100064897.1\|160574_161045_+	argininosuccinate synthase	NA	NA	NA	NA
WP_001189277.1\|162823_163144_-	hypothetical protein	NA	NA	NA	NA
WP_000424452.1\|163900_164281_+\|bacteriocin	SP_0115 family bacteriocin-like peptide	NA	NA	NA	NA
WP_001268158.1\|164697_165546_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000915343.1\|166011_166350_+	peptidase C39	NA	NA	NA	NA
WP_000973716.1\|166974_167187_+	hypothetical protein	NA	NA	NA	NA
WP_001827554.1\|167918_168977_+	hypothetical protein	NA	NA	NA	NA
WP_000792248.1\|169291_170269_+	hypothetical protein	NA	NA	NA	NA
WP_000424415.1\|170645_171020_+\|bacteriocin	SPH_0224 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000619768.1\|171227_172130_+	hypothetical protein	NA	NA	NA	NA
WP_000424447.1\|172185_172518_+	hypothetical protein	NA	NA	NA	NA
WP_000072916.1\|172514_173243_+	hypothetical protein	NA	NA	NA	NA
WP_001035308.1\|175164_177090_+	pneumococcal surface protein A	NA	NA	NA	NA
WP_001282978.1\|177490_178612_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000193610.1\|178752_179208_+	NUDIX hydrolase	NA	NA	NA	NA
WP_000220953.1\|179217_181131_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_000331999.1\|181325_183005_-	ribonuclease J	NA	NA	NA	NA
WP_000639579.1\|183006_183240_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_000974047.1\|184057_184210_-\|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	NA	NA	NA	NA
WP_000180805.1\|184211_184397_-\|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	NA	NA	NA	NA

DBSCAN-SWA_5

363094 : 407654

Streptococcus_phage(25.0%)

holin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001063400.1\|363094_365200_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	1.4e-115	37.2
WP_000032550.1\|365495_365978_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_000743632.1\|366072_367557_-	DUF1846 domain-containing protein	NA	NA	NA	NA
WP_001156828.1\|367709_369320_+	alpha-glucosidase	NA	NA	NA	NA
WP_000091049.1\|373182_374628_+	LCP family protein	A0A1X9I5X1	Streptococcus_phage	1.2e-126	57.9
WP_000565368.1\|374629_375361_+	capsular polysaccharide biosynthesis protein Cps4B	NA	NA	NA	NA
WP_000664163.1\|375369_376062_+	capsular polysaccharide biosynthesis protein CpsC	A0A1X9I5E1	Streptococcus_phage	4.6e-55	53.3
WP_001142561.1\|376071_376752_+	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	6.8e-75	61.2
WP_001013543.1\|376766_378134_+	sugar transferase	NA	NA	NA	NA
WP_000355892.1\|378262_379207_+	glycosyltransferase family 8 protein	A0A2P0VP84	Tetraselmis_virus	4.9e-07	25.4
WP_001811682.1\|379243_379801_+	LicD family protein	NA	NA	NA	NA
WP_000029843.1\|379787_380507_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_000520508.1\|380509_381496_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_000925815.1\|381495_382839_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA
WP_171803745.1\|382966_384385_+	hypothetical protein	NA	NA	NA	NA
WP_000676125.1\|384873_385743_+	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	1.3e-102	64.6
WP_001282453.1\|385743_386340_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	H9NC63	Sphingomonas_phage	5.1e-10	33.1
WP_000141499.1\|386349_387399_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.3e-72	44.5
WP_000600913.1\|387464_388316_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	8.6e-27	35.8
WP_001826718.1\|388412_388826_+\|transposase	transposase	A0A218MNE7	uncultured_virus	1.5e-05	24.6
WP_000245749.1\|388898_389156_+\|transposase	transposase	NA	NA	NA	NA
WP_050309047.1\|389201_389348_+\|transposase	transposase	NA	NA	NA	NA
WP_001809483.1\|389418_389577_+\|transposase	transposase domain-containing protein	NA	NA	NA	NA
WP_000842572.1\|389775_391758_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001032476.1\|392058_397371_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_001039985.1\|397537_399697_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_000248786.1\|399693_400290_-	Holliday junction resolvase RecU	A0A1L2JY30	Aeribacillus_phage	1.5e-17	33.9
WP_000179549.1\|400355_400883_+	DUF1273 domain-containing protein	NA	NA	NA	NA
WP_000146522.1\|400952_401282_+	cell division regulator GpsB	NA	NA	NA	NA
WP_000711393.1\|401767_402925_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_000039306.1\|402937_404332_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA
WP_000158793.1\|404407_405832_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	2.1e-41	29.6
WP_000518008.1\|405843_406533_+	response regulator transcription factor	NA	NA	NA	NA
WP_000771050.1\|406631_407654_+\|holin	choline-binding protein CbpC	NA	NA	NA	NA

DBSCAN-SWA_6

520201 : 568629

Klosneuvirus(20.0%)

bacteriocin,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000181374.1\|520201_520705_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_000185835.1\|521157_521721_+	ECF transporter S component	NA	NA	NA	NA
WP_000678693.1\|521734_522361_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_000867290.1\|522388_522778_+	chromosome partitioning protein ParB	NA	NA	NA	NA
WP_000333653.1\|522782_523232_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000418402.1\|523359_523947_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_000105242.1\|524336_525944_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	8.9e-142	47.0
WP_000026645.1\|526502_528134_-	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_000795206.1\|528422_533363_+	bacterial Ig-like domain-containing protein	NA	NA	NA	NA
WP_001096743.1\|533452_534649_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_000119900.1\|534784_535312_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_000659547.1\|535388_535745_+	transcriptional repressor GlnR	NA	NA	NA	NA
WP_001122904.1\|535781_537128_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_001808898.1\|537223_537343_-	hypothetical protein	NA	NA	NA	NA
WP_001220765.1\|537908_539180_+	restriction endonuclease subunit S	A0A1V0SKS6	Klosneuvirus	6.9e-12	29.2
WP_001830166.1\|539133_539742_-	restriction endonuclease subunit S	A0A1V0SLK8	Klosneuvirus	8.6e-13	30.1
WP_000651177.1\|539752_540550_-	tyrosine-type DNA invertase PsrA	A0A0H4TI16	Erysipelothrix_phage	1.3e-21	28.7
WP_000187234.1\|540606_542175_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_000029046.1\|542174_543638_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_000229099.1\|543650_545984_-	DEAD/DEAH box helicase family protein	Q5YA94	Bacillus_phage	5.8e-25	27.6
WP_001088689.1\|546590_547100_+	DUF2812 domain-containing protein	NA	NA	NA	NA
WP_000255771.1\|547263_548298_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_000046031.1\|548324_548849_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_000034673.1\|549328_551152_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.0e-133	47.2
WP_000114433.1\|551153_551510_+	hypothetical protein	NA	NA	NA	NA
WP_001066296.1\|551911_553048_+	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	2.4e-24	31.3
WP_001811606.1\|553076_553253_-	hypothetical protein	NA	NA	NA	NA
WP_000777760.1\|553414_553702_-	hypothetical protein	NA	NA	NA	NA
WP_001278304.1\|553711_554122_-	HIT family protein	B5LJ12	Mycobacterium_phage	4.4e-05	31.6
WP_000889923.1\|554189_554921_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.0e-25	28.6
WP_000653768.1\|554917_555967_+	ABC transporter permease	NA	NA	NA	NA
WP_000132583.1\|556134_556464_-	hypothetical protein	NA	NA	NA	NA
WP_000682136.1\|556740_557079_+	response regulator transcription factor	NA	NA	NA	NA
WP_001219134.1\|557083_557821_+	response regulator transcription factor	NA	NA	NA	NA
WP_001099894.1\|557834_559175_+	sensor histidine kinase	NA	NA	NA	NA
WP_000358812.1\|559218_559374_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA
WP_001069062.1\|559430_560792_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_000205159.1\|560802_562956_-	peptide cleavage/export ABC transporter BlpA	W8CYL7	Bacillus_phage	2.4e-41	27.7
WP_001093262.1\|563236_563440_+\|bacteriocin	bacteriocin class II family protein	NA	NA	NA	NA
WP_000411016.1\|563757_563961_+	hypothetical protein	NA	NA	NA	NA
WP_000379878.1\|565920_566175_+\|bacteriocin	two-peptide bacteriocin subunit BlpM	NA	NA	NA	NA
WP_001099492.1\|566190_566394_+\|bacteriocin	two-peptide bacteriocin subunit BlpN	NA	NA	NA	NA
WP_000379963.1\|566637_566871_+	hypothetical protein	NA	NA	NA	NA
WP_000760523.1\|566902_567592_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000276498.1\|567633_567867_+	hypothetical protein	NA	NA	NA	NA
WP_000394036.1\|568017_568629_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_7

704211 : 763989

Bacillus_virus(27.27%)

bacteriocin,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000850388.1\|704211_704511_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
WP_000732435.1\|704581_706603_+\|bacteriocin	bacteriocin-associated integral membrane family protein	NA	NA	NA	NA
WP_000571275.1\|706604_707246_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.9e-24	36.2
WP_000863044.1\|707349_708702_+	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_000724835.1\|708703_709762_+	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	NA	NA	NA	NA
WP_000031146.1\|709771_710971_+	cell division protein DivIB	NA	NA	NA	NA
WP_001206720.1\|711203_711905_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_000170915.1\|711938_712571_+	orotate phosphoribosyltransferase	R9S7H3	Prochlorococcus_phage	2.4e-05	32.1
WP_000394075.1\|713249_714014_+	hypothetical protein	NA	NA	NA	NA
WP_000808910.1\|714013_714766_+	hypothetical protein	NA	NA	NA	NA
WP_001827732.1\|714775_715474_+	hypothetical protein	NA	NA	NA	NA
WP_001002570.1\|715470_716118_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.3e-18	27.8
WP_001810190.1\|717848_718136_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_001154141.1\|718145_718526_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_000384087.1\|718485_719166_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_000120724.1\|719380_719527_+	lactate oxidase	NA	NA	NA	NA
WP_000102460.1\|719653_721144_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	7.3e-90	39.6
WP_000120709.1\|721768_722905_+	L-lactate oxidase	NA	NA	NA	NA
WP_000449822.1\|723459_724128_+	TenA family protein	NA	NA	NA	NA
WP_000202454.1\|724415_725198_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_000468583.1\|725199_725829_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_000915286.1\|726387_726948_+	ECF transporter S component	NA	NA	NA	NA
WP_000522085.1\|726948_728334_+	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.7e-08	25.9
WP_000241371.1\|728335_728986_+	hypothetical protein	NA	NA	NA	NA
WP_000397207.1\|728996_729689_+	thiaminase II	NA	NA	NA	NA
WP_001225557.1\|729693_730218_+	energy coupling factor transporter S component ThiW	NA	NA	NA	NA
WP_001155200.1\|730217_731021_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_001078231.1\|731013_731646_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_000221748.1\|731854_732661_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_001167208.1\|733026_733422_+	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
WP_000935053.1\|733432_733804_+	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_000136275.1\|733813_736057_+	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	5.1e-95	37.5
WP_000191798.1\|736263_738039_+	pyruvate oxidase	E5EQ70	Micromonas_sp._RCC1109_virus	1.9e-28	23.5
WP_000380705.1\|739724_740021_+	family 1 glycosylhydrolase	NA	NA	NA	NA
WP_001294284.1\|740141_741086_+	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA
WP_000665619.1\|744992_746006_-	lactonase family protein	NA	NA	NA	NA
WP_000435455.1\|746149_747316_+	AI-2E family transporter	NA	NA	NA	NA
WP_001065952.1\|747305_748535_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_000120830.1\|748680_749322_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_000891772.1\|749331_749961_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-28	37.3
WP_000759187.1\|749985_750822_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000434650.1\|751099_751447_-\|bacteriocin	PedC/BrcD family bacteriocin maturation disulfide isomerase	NA	NA	NA	NA
WP_000121710.1\|751557_753276_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.5e-272	83.4
WP_001833809.1\|753509_753653_+\|transposase	transposase	NA	NA	NA	NA
WP_001844799.1\|753619_753835_+	hypothetical protein	NA	NA	NA	NA
WP_000200313.1\|753821_754355_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000935666.1\|754695_754950_+	hypothetical protein	NA	NA	NA	NA
WP_001021439.1\|755060_756167_+	MucBP domain-containing protein	NA	NA	NA	NA
WP_000248992.1\|756124_756646_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_000348125.1\|756869_757739_+	aquaporin family protein	NA	NA	NA	NA
WP_001040724.1\|758648_759845_+	elongation factor Tu	A0A076FFS6	Aureococcus_anophage	7.3e-32	29.6
WP_000850561.1\|761322_762405_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.1e-37	30.8
WP_000915896.1\|762401_763379_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_001811065.1\|763611_763989_+\|transposase	PD-(D/E)XK nuclease family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

778806 : 837244

Streptococcus_phage(20.0%)

holin,tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000405832.1\|778806_779301_+	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	1.9e-42	52.1
WP_001170347.1\|779300_779831_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.4e-46	54.3
WP_000889093.1\|779824_780181_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.2e-33	57.3
WP_001103449.1\|780338_781139_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_000590986.1\|781138_781882_+	amino acid ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.6e-13	27.4
WP_000926599.1\|781959_782184_+	DUF4059 family protein	NA	NA	NA	NA
WP_000272311.1\|782249_783161_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.9e-89	51.5
WP_000855748.1\|783198_783927_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_001272941.1\|783971_784583_-	peptide deformylase	E3SLL2	Synechococcus_phage	4.9e-16	42.4
WP_000972926.1\|786182_787010_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_000261440.1\|787011_787647_+\|holin	1-alkyl-2-acetylglycerophosphocholine esterase	A0A2K9L661	Tupanvirus	3.3e-07	28.2
WP_001102210.1\|787730_788456_+	CppA family protein	NA	NA	NA	NA
WP_000872215.1\|788452_789388_+	serine hydrolase	NA	NA	NA	NA
WP_000071699.1\|789396_790293_+	EamA family transporter	NA	NA	NA	NA
WP_000936188.1\|790335_791034_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000065723.1\|791175_792738_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.4e-19	32.8
WP_001136120.1\|793041_793227_+	hypothetical protein	NA	NA	NA	NA
WP_000152347.1\|793207_793495_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_000691853.1\|793727_793922_+\|transposase	transposase	NA	NA	NA	NA
WP_000484478.1\|793908_794214_+\|transposase	IS66 family transposase zinc-finger binding domain-containing protein	NA	NA	NA	NA
WP_001810457.1\|794265_794436_+\|transposase	transposase	NA	NA	NA	NA
WP_001811052.1\|795028_795187_+\|transposase	transposase domain-containing protein	NA	NA	NA	NA
WP_000229344.1\|795650_797015_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.6e-12	26.9
WP_001141950.1\|797002_797698_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000368971.1\|797697_798282_-	MptD family putative ECF transporter S component	NA	NA	NA	NA
WP_000657821.1\|798292_800014_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-29	27.3
WP_000708369.1\|799997_801752_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.4e-23	24.8
WP_000122904.1\|801911_802904_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000217307.1\|803413_804604_-	site-specific DNA-methyltransferase	A0A0H3UZ66	Geobacillus_virus	7.0e-43	37.4
WP_000169077.1\|805778_807065_+	U32 family peptidase	Q6DW11	Phage_TP	4.6e-40	31.3
WP_001809119.1\|807079_807391_+	hypothetical protein	NA	NA	NA	NA
WP_192928358.1\|808280_809087_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	2.2e-24	37.6
WP_000773501.1\|809102_809831_+	ABC transporter permease	NA	NA	NA	NA
WP_000240379.1\|810215_810425_+	helix-turn-helix transcriptional regulator	A0A1V0E021	Clostridioides_phage	2.0e-06	47.4
WP_000797184.1\|810414_810903_+	hypothetical protein	NA	NA	NA	NA
WP_000283118.1\|811018_812479_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	1.1e-103	43.3
WP_000058034.1\|812475_813300_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	5.3e-74	57.1
WP_000835667.1\|813649_814201_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_075213576.1\|814915_815608_+	G5 domain-containing protein	NA	NA	NA	NA
WP_000240827.1\|815661_816051_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA
WP_001090149.1\|816711_817740_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_000864617.1\|817890_818598_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_000048055.1\|818737_818914_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_000115143.1\|819043_819979_+	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_000886659.1\|819971_820760_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_000895048.1\|820760_821144_+	DUF948 domain-containing protein	NA	NA	NA	NA
WP_000517372.1\|821159_821549_+	YtxH domain-containing protein	NA	NA	NA	NA
WP_001170072.1\|821632_822763_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
WP_000524781.1\|822767_823505_+	acyl-[acyl-carrier-protein] thioesterase	NA	NA	NA	NA
WP_000875454.1\|823515_824289_+	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
WP_000850480.1\|824278_824896_+	TIGR01906 family membrane protein	NA	NA	NA	NA
WP_000631259.1\|825105_825507_+	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA
WP_001041974.1\|825506_825785_+	UPF0223 family protein	NA	NA	NA	NA
WP_000444042.1\|825774_826548_+	inositol monophosphatase family protein	NA	NA	NA	NA
WP_001160266.1\|826548_827853_+	RsmF rRNA methyltransferase first C-terminal domain-containing protein	NA	NA	NA	NA
WP_000746338.1\|828426_829305_+	phosphate ABC transporter substrate-binding protein PstS	NA	NA	NA	NA
WP_001070908.1\|829304_830222_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_001201789.1\|830211_831096_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_000109217.1\|831106_831910_+	phosphate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.6e-12	30.7
WP_000128639.1\|831922_832681_+	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.7e-15	28.6
WP_000946471.1\|832692_833346_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_000837360.1\|833502_834318_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_000744830.1\|834337_835609_-	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	2.2e-103	47.5
WP_000360300.1\|835750_836482_+	acetolactate decarboxylase	NA	NA	NA	NA
WP_000152225.1\|836491_837244_+\|protease	YhfC family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_9

878003 : 928983

Indivirus(22.22%)

holin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000821277.1\|878003_878591_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000926537.1\|878990_879800_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_000078475.1\|879804_880506_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_000654131.1\|880530_881448_+	N-acetylneuraminate lyase	NA	NA	NA	NA
WP_000537366.1\|881475_883017_+	sodium:solute symporter	NA	NA	NA	NA
WP_000587136.1\|883035_883494_+	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA
WP_000739359.1\|883495_885718_+	exo-alpha-sialidase	NA	NA	NA	NA
WP_000248710.1\|885757_886867_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_000691261.1\|887023_887914_+	ROK family protein	NA	NA	NA	NA
WP_000185366.1\|887938_888262_+	hypothetical protein	NA	NA	NA	NA
WP_001018344.1\|888251_890243_+	V-type ATP synthase subunit I	NA	NA	NA	NA
WP_000400484.1\|890258_890735_+	V-type ATP synthase subunit K	NA	NA	NA	NA
WP_000067168.1\|890768_891350_+	hypothetical protein	NA	NA	NA	NA
WP_000380544.1\|891414_892422_+	V-type ATPase subunit	NA	NA	NA	NA
WP_000387941.1\|892411_892732_+	V-type ATP synthase subunit F	NA	NA	NA	NA
WP_000191781.1\|892794_894570_+	V-type ATP synthase subunit A	NA	NA	NA	NA
WP_000111248.1\|894570_895956_+	V-type ATP synthase subunit B	NA	NA	NA	NA
WP_000251935.1\|895978_896590_+	V-type ATP synthase subunit D	NA	NA	NA	NA
WP_001136124.1\|896862_897048_+	hypothetical protein	NA	NA	NA	NA
WP_000152337.1\|897028_897352_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_000841823.1\|897805_898246_+\|transposase	transposase	A0A218MNE7	uncultured_virus	1.9e-06	24.6
WP_001811052.1\|898840_898999_+\|transposase	transposase domain-containing protein	NA	NA	NA	NA
WP_000711943.1\|900504_900675_+	hypothetical protein	NA	NA	NA	NA
WP_000199559.1\|901180_902527_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_000252103.1\|904509_905088_+	hypothetical protein	NA	NA	NA	NA
WP_001808393.1\|905144_905429_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000401770.1\|905482_906418_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_001162128.1\|906521_906965_+	flavodoxin	NA	NA	NA	NA
WP_000362440.1\|907080_907347_+	chorismate mutase	NA	NA	NA	NA
WP_000712095.1\|907343_907718_+	fluoride efflux transporter CrcB	NA	NA	NA	NA
WP_000237399.1\|907711_908041_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	1.4e-09	37.0
WP_001068669.1\|908159_908507_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_000023528.1\|908675_909482_-	sugar-phosphatase	NA	NA	NA	NA
WP_001003484.1\|909494_910799_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	5.0e-26	29.8
WP_000702356.1\|910870_911248_+	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_000402066.1\|911337_911670_+	putative DNA-binding protein	NA	NA	NA	NA
WP_000863634.1\|911681_913253_+	signal recognition particle protein	NA	NA	NA	NA
WP_000808289.1\|913447_914731_-	uracil transporter	Q9KX94	Enterobacteria_phage	5.2e-60	35.3
WP_000801941.1\|915033_915747_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_000219823.1\|915840_916401_+	LemA family protein	NA	NA	NA	NA
WP_000895728.1\|916402_917302_+\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_000558900.1\|917345_918905_-	ABC-F family ATP-binding cassette domain-containing protein	A0A1B0RXA0	Streptococcus_phage	2.1e-10	27.0
WP_000389603.1\|919143_919461_-	hypothetical protein	NA	NA	NA	NA
WP_000773228.1\|919630_920173_+	DUF177 domain-containing protein	NA	NA	NA	NA
WP_000244452.1\|920172_920802_+	endonuclease III	NA	NA	NA	NA
WP_000850024.1\|921012_921534_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_001293836.1\|921552_922476_+	aspartate carbamoyltransferase catalytic subunit	M1HGA5	Paramecium_bursaria_Chlorella_virus	3.0e-25	31.7
WP_000166700.1\|922525_923605_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	6.3e-59	35.9
WP_001126411.1\|923917_927094_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_001199658.1\|927368_928178_-\|holin	phosphorylcholine transferase LicD	A0A1V0SD50	Indivirus	2.6e-09	30.3
WP_000811992.1\|928179_928983_-\|holin	phosphorylcholine transferase LicD	A0A1V0SD50	Indivirus	5.3e-10	27.1

DBSCAN-SWA_10

1070507 : 1094662

Streptococcus_phage(90.48%)

integrase,transposase

attL 1068796:1068809|attR 1073639:1073652

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1068796:1068809	attL	NA	NA	NA	NA
WP_001291557.1\|1070507_1071725_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	2.4e-232	99.8
WP_000814511.1\|1071806_1072010_-	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
WP_000857133.1\|1072470_1072701_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
WP_000804885.1\|1072697_1073120_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
WP_001227347.1\|1073624_1073978_+	helix-turn-helix domain-containing protein	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
1073639:1073652	attR	NA	NA	NA	NA
WP_000336323.1\|1074037_1074205_-	cysteine-rich KTR domain-containing protein	D0R0F6	Streptococcus_phage	1.6e-14	68.0
WP_000691734.1\|1074323_1076243_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	96.9
WP_001814923.1\|1076258_1076375_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_001224320.1\|1076619_1077555_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	7.7e-170	99.0
WP_000769868.1\|1077551_1078553_-	lysozyme family protein	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
WP_000804748.1\|1078549_1080727_-	membrane protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
WP_000331160.1\|1080729_1083177_-	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
WP_000506270.1\|1083160_1083667_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
WP_000342539.1\|1083641_1084139_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
WP_001009056.1\|1084255_1084477_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_000019067.1\|1084656_1085904_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.9e-12	23.9
WP_001038795.1\|1086160_1086898_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	3.1e-134	99.2
WP_001814874.1\|1087022_1087106_-	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA
WP_001815707.1\|1087154_1088573_-	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	1.5e-233	100.0
WP_031764745.1\|1088595_1088748_-	hypothetical protein	NA	NA	NA	NA
WP_000813488.1\|1088750_1090136_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
WP_000985015.1\|1090164_1090551_-	YdcP family protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
WP_000420682.1\|1090566_1090881_-	YdcP family protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
WP_001034978.1\|1091196_1091703_-	insulinase family protein	NA	NA	NA	NA
WP_000371017.1\|1091695_1092817_-	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_001071847.1\|1093078_1094662_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.6e-10	28.9

DBSCAN-SWA_11

1294518 : 1306406

Streptococcus_phage(72.73%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000345254.1\|1294518_1295166_-	replication initiator protein A	A0A2P0VK56	Streptococcus_phage	7.0e-13	33.7
WP_001261452.1\|1295274_1295793_-	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_001166859.1\|1296019_1296889_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.5e-116	76.1
WP_000358228.1\|1296891_1297209_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.9e-28	60.0
WP_000806708.1\|1297248_1298139_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	6.4e-73	51.4
WP_000033362.1\|1298135_1298774_-	dTMP kinase	M1PSC7	Streptococcus_phage	9.8e-76	68.1
WP_000689706.1\|1298993_1299791_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	8.0e-59	50.2
WP_000254674.1\|1299794_1301057_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	7.2e-139	64.0
WP_075213577.1\|1301066_1302197_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.0e-115	58.7
WP_000728274.1\|1302276_1304160_-\|holin	phosphorylcholine esterase CbpE	Q332B9	Clostridium_botulinum_C_phage	1.2e-09	22.9
WP_000403197.1\|1304162_1305050_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	1.0e-09	28.0
WP_000745387.1\|1305039_1305501_-	signal peptidase II	NA	NA	NA	NA
WP_001025729.1\|1305497_1306406_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	5.2e-06	27.7

DBSCAN-SWA_12

1540003 : 1546757

Streptococcus_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000081006.1\|1540003_1540972_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	2.8e-66	100.0
WP_000011274.1\|1541005_1541917_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	1.3e-153	95.4
WP_001231091.1\|1541913_1542891_-	YvcK family protein	A1IMD5	Streptococcus_phage	3.4e-184	99.7
WP_000163033.1\|1542887_1543778_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.9e-06	29.8
WP_001140412.1\|1543829_1544210_-	RidA family protein	NA	NA	NA	NA
WP_000422599.1\|1544220_1544808_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_000106342.1\|1544816_1546049_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.1e-131	59.2
WP_000442276.1\|1546080_1546251_-	hypothetical protein	NA	NA	NA	NA
WP_000162442.1\|1546250_1546757_-	dihydrofolate reductase	A0A1B2IAU3	Erwinia_phage	4.6e-20	33.3

DBSCAN-SWA_13

1809434 : 1816766

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000167844.1\|1809434_1810136_+	UDP-glucose 4-epimerase	A0A2K9L1R4	Tupanvirus	6.0e-34	35.1
WP_000777246.1\|1810558_1811518_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.0e-57	40.8
WP_001193666.1\|1811507_1812464_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_000764306.1\|1812460_1813213_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.6e-14	27.9
WP_000858255.1\|1813308_1814274_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000821640.1\|1814498_1814741_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.3e-17	59.4
WP_001222228.1\|1814740_1815463_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_000105310.1\|1815449_1816019_-	segregation/condensation protein B	A0A1B1IVT7	uncultured_Mediterranean_phage	5.0e-15	34.9
WP_000351907.1\|1816037_1816766_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	5.3e-09	22.3

DBSCAN-SWA_14

1989781 : 2034139

Streptococcus_phage(98.39%)

capsid,terminase,holin,portal,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000698513.1\|1989781_1990039_-	hypothetical protein	A0A126GGL1	Streptococcus_phage	1.4e-41	100.0
WP_000350474.1\|1990270_1991227_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A1S5SDA3	Streptococcus_phage	8.7e-145	100.0
WP_001186218.1\|1991226_1991562_-\|holin	phage holin	A0A1S5SF76	Streptococcus_phage	3.5e-40	100.0
WP_001811580.1\|1991565_1991865_-	hypothetical protein	X2KT07	Streptococcus_phage	1.9e-45	100.0
WP_000852245.1\|1991873_1992224_-	hypothetical protein	X2KPI8	Streptococcus_phage	4.7e-64	100.0
WP_001091115.1\|1992226_1992430_-	hypothetical protein	A0A1S5SDH0	Streptococcus_phage	6.6e-26	100.0
WP_000068026.1\|1999808_2000159_-	hypothetical protein	A0A1S5SCJ5	Streptococcus_phage	1.2e-62	100.0
WP_000212173.1\|2000167_2003821_-	hypothetical protein	A0A1S5SD92	Streptococcus_phage	0.0e+00	100.0
WP_000478016.1\|2003807_2004158_-	hypothetical protein	A0A1S5S814	Streptococcus_phage	1.2e-56	100.0
WP_001185632.1\|2004196_2004577_-	hypothetical protein	A0A141DZN3	Streptococcus_phage	1.6e-65	100.0
WP_000880675.1\|2004581_2004995_-	hypothetical protein	A0A1S5SDK3	Streptococcus_phage	2.5e-72	100.0
WP_000608235.1\|2004997_2005366_-	hypothetical protein	A0A1S5SFB8	Streptococcus_phage	1.2e-65	100.0
WP_000015941.1\|2005362_2005878_-	HK97 gp10 family phage protein	X2KPH9	Streptococcus_phage	2.7e-92	100.0
WP_000478945.1\|2005852_2006191_-	hypothetical protein	A0A1S5S812	Streptococcus_phage	1.3e-55	100.0
WP_000021220.1\|2006171_2006483_-\|head,tail	phage head-tail adapter protein	A0A1S5SES7	Streptococcus_phage	2.5e-48	100.0
WP_000669352.1\|2006484_2006673_-	hypothetical protein	A0A1S5SF62	Streptococcus_phage	6.5e-28	100.0
WP_000054935.1\|2006662_2006845_-	Rho termination factor N-terminal domain-containing protein	A0A1S5SF01	Streptococcus_phage	1.2e-23	100.0
WP_000123892.1\|2006856_2007699_-\|capsid	N4-gp56 family major capsid protein	A0A1S5SF88	Streptococcus_phage	3.8e-152	100.0
WP_001288026.1\|2007704_2008289_-	DUF4355 domain-containing protein	A0A1S5S806	Streptococcus_phage	4.3e-86	100.0
WP_000890163.1\|2008515_2008767_-	hypothetical protein	A0A1S5SBY0	Streptococcus_phage	8.9e-41	100.0
WP_000877355.1\|2008768_2009032_-	hypothetical protein	A0A1S5SIN5	Streptococcus_phage	2.4e-44	100.0
WP_000565276.1\|2009074_2009488_-	HD domain-containing protein	A0A060QNR4	Streptococcus_phage	1.1e-67	100.0
WP_000651747.1\|2009484_2009694_-	hypothetical protein	A0A141E1P2	Streptococcus_phage	2.6e-33	100.0
WP_192928357.1\|2009695_2011333_-\|capsid	minor capsid protein	A0A1S5SDF1	Streptococcus_phage	1.9e-301	100.0
WP_000285395.1\|2011241_2012711_-\|portal	phage portal protein	A0A1S5SDJ7	Streptococcus_phage	2.7e-278	100.0
WP_000084428.1\|2012722_2014021_-\|terminase	PBSX family phage terminase large subunit	A0A1S5SBX3	Streptococcus_phage	2.5e-259	100.0
WP_000863703.1\|2013998_2014478_-\|terminase	terminase small subunit	A0A1S5SFR0	Streptococcus_phage	2.8e-83	100.0
WP_001030244.1\|2014912_2015335_-	DUF1492 domain-containing protein	A0A141E1Y4	Streptococcus_phage	6.3e-71	100.0
WP_000802874.1\|2015404_2015770_-	hypothetical protein	A0A1S5SDW3	Streptococcus_phage	1.3e-53	100.0
WP_013315462.1\|2015766_2016141_-	hypothetical protein	E8ZE14	Streptococcus_phage	2.5e-63	100.0
WP_001042650.1\|2016342_2016522_-	hypothetical protein	A0A1S5S7Z6	Streptococcus_phage	4.3e-29	100.0
WP_000612391.1\|2016514_2016910_-	hypothetical protein	A0A1S5SD94	Streptococcus_phage	3.3e-74	100.0
WP_000389223.1\|2016924_2017098_-	hypothetical protein	Q0R590	Streptococcus_phage	1.7e-22	100.0
WP_000160162.1\|2017097_2017307_-	hypothetical protein	A0A1S5S9F0	Streptococcus_phage	2.0e-33	100.0
WP_000772902.1\|2017307_2017979_-	DUF1642 domain-containing protein	A0A141E1Y8	Streptococcus_phage	4.1e-125	100.0
WP_000969678.1\|2017968_2018298_-	hypothetical protein	A0A141E1Y9	Streptococcus_phage	2.3e-60	100.0
WP_000167804.1\|2018342_2018765_-	hypothetical protein	A0A141E1Q1	Streptococcus_phage	2.8e-79	100.0
WP_000779139.1\|2018808_2019237_-	RusA family crossover junction endodeoxyribonuclease	A0A1S5SD90	Streptococcus_phage	5.4e-78	100.0
WP_000157072.1\|2019233_2019563_-	hypothetical protein	A0A141E1Z2	Streptococcus_phage	1.6e-53	100.0
WP_000455270.1\|2019576_2019786_-	hypothetical protein	A0A1S5SFI1	Streptococcus_phage	3.2e-36	100.0
WP_000034831.1\|2019751_2020258_-	methyltransferase domain-containing protein	A0A141E1B8	Streptococcus_phage	2.5e-98	100.0
WP_000609561.1\|2020267_2020684_-	single-stranded DNA-binding protein	E8ZDH2	Streptococcus_phage	3.0e-73	100.0
WP_000598346.1\|2020778_2021114_-	sporulation protein Cse60	A0A1S5SBY6	Streptococcus_phage	2.0e-59	100.0
WP_001838362.1\|2021106_2021430_-	hypothetical protein	A0A141E242	Streptococcus_phage	6.1e-58	100.0
WP_001157037.1\|2021597_2022638_-	DUF1351 domain-containing protein	A0A060QRX4	Streptococcus_phage	2.8e-189	100.0
WP_000184002.1\|2022647_2023466_-	phage recombination protein Bet	A0A1S5SD57	Streptococcus_phage	6.7e-154	100.0
WP_013315464.1\|2023588_2023750_-	hypothetical protein	A0A1S5SD47	Streptococcus_phage	1.4e-23	100.0
WP_000471458.1\|2023742_2023997_-	hypothetical protein	A0A1S5SDG7	Streptococcus_phage	2.7e-37	100.0
WP_000771953.1\|2023989_2024193_-	hypothetical protein	A0A141E201	Streptococcus_phage	2.0e-27	100.0
WP_000859598.1\|2024192_2024354_-	hypothetical protein	A0A141E1R4	Streptococcus_phage	3.7e-24	100.0
WP_001004043.1\|2024425_2025142_-	phage antirepressor KilAC domain-containing protein	A0A1S5SFF6	Streptococcus_phage	1.5e-133	100.0
WP_001247819.1\|2025165_2025369_-	hypothetical protein	A0A141E1R6	Streptococcus_phage	3.0e-31	100.0
WP_001199340.1\|2025618_2025981_-	helix-turn-helix domain-containing protein	A0A1S5SFN6	Streptococcus_phage	1.4e-63	100.0
WP_000041498.1\|2026053_2026260_-	helix-turn-helix transcriptional regulator	A0A1S5SFQ0	Streptococcus_phage	9.0e-31	100.0
WP_000134992.1\|2026332_2026572_+	hypothetical protein	A0A1S5SD52	Streptococcus_phage	1.4e-43	100.0
WP_000656630.1\|2026564_2026735_-	hypothetical protein	A0A141E0V7	Streptococcus_phage	2.8e-22	100.0
WP_000389590.1\|2026731_2026875_-	hypothetical protein	A0A1S5SIL5	Streptococcus_phage	1.8e-17	100.0
WP_001094376.1\|2027468_2027744_-	hypothetical protein	A0A1S5SD97	Streptococcus_phage	1.7e-45	100.0
WP_000862003.1\|2027905_2028673_+	helix-turn-helix domain-containing protein	A0A1S5SFG5	Streptococcus_phage	1.8e-140	100.0
WP_000064302.1\|2028674_2028875_+	hypothetical protein	A0A1S5SFF2	Streptococcus_phage	7.1e-33	100.0
WP_000633509.1\|2029056_2030502_+	recombinase family protein	A0A1S5SDJ4	Streptococcus_phage	2.2e-277	100.0
WP_000355367.1\|2030583_2031600_-	type II secretion system F family protein	NA	NA	NA	NA
WP_000249563.1\|2031547_2032489_-	type II/IV secretion system protein	NA	NA	NA	NA
WP_000286415.1\|2032564_2032930_-	DUF1033 family protein	NA	NA	NA	NA
WP_000649468.1\|2033080_2034139_-	zinc-dependent alcohol dehydrogenase family protein	E3SJ82	Synechococcus_phage	2.7e-14	26.8

DBSCAN-SWA_15

2066030 : 2127995

Bacillus_phage(25.0%)

holin,tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001092701.1\|2066030_2067722_+\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	3.5e-80	32.2
WP_000035500.1\|2068580_2069066_+	cupin domain-containing protein	A0A291ATU0	Pandoravirus	1.3e-16	34.6
WP_000166475.1\|2069149_2069857_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.4e-38	39.6
WP_000833273.1\|2069857_2071189_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.9e-33	34.9
WP_000669498.1\|2071355_2072231_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_000595180.1\|2072348_2073212_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_000049770.1\|2073204_2074020_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_000536449.1\|2074021_2074774_+	phosphate ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	3.9e-15	27.4
WP_001245778.1\|2074788_2075439_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_001061759.1\|2075506_2075932_+\|transposase	transposase	NA	NA	NA	NA
WP_000415108.1\|2076697_2077714_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_000202228.1\|2077735_2078635_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	4.0e-75	50.3
WP_000658498.1\|2078701_2079379_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_000834319.1\|2079362_2079902_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_000885070.1\|2079913_2081044_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA
WP_000127466.1\|2081111_2081810_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA
WP_001180963.1\|2083014_2085480_-	penicillin-binding protein	NA	NA	NA	NA
WP_000546881.1\|2085621_2086878_+\|tRNA	tyrosine--tRNA ligase	A0A2C9CYK4	Yersinia_phage	2.5e-75	41.5
WP_000008783.1\|2086955_2089019_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	7.6e-53	26.0
WP_000910909.1\|2089020_2089299_-	hypothetical protein	NA	NA	NA	NA
WP_001095537.1\|2089443_2090292_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_001037913.1\|2091090_2091663_+	hypothetical protein	NA	NA	NA	NA
WP_000950170.1\|2092707_2094966_-	glycogen/starch/alpha-glucan phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	5.7e-09	37.5
WP_000747289.1\|2094991_2096509_-	4-alpha-glucanotransferase	NA	NA	NA	NA
WP_000095485.1\|2097058_2098330_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_000414969.1\|2098440_2099733_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_001065636.1\|2099734_2100577_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_000938211.1\|2100837_2101638_+	DUF1189 domain-containing protein	NA	NA	NA	NA
WP_001145439.1\|2101647_2102634_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000814950.1\|2103104_2104046_-	YitT family protein	NA	NA	NA	NA
WP_000830877.1\|2104023_2105787_-\|tRNA	aspartate--tRNA ligase	A0A1V0SJ84	Klosneuvirus	5.0e-13	26.4
WP_000832180.1\|2106138_2106369_-	hypothetical protein	NA	NA	NA	NA
WP_000771239.1\|2106386_2107028_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000730279.1\|2107039_2107774_-	DUF3169 family protein	NA	NA	NA	NA
WP_001046145.1\|2107776_2107974_-	hypothetical protein	NA	NA	NA	NA
WP_001176227.1\|2107973_2108180_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000270083.1\|2108189_2108504_-	hypothetical protein	NA	NA	NA	NA
WP_000376203.1\|2108656_2108830_-	hypothetical protein	NA	NA	NA	NA
WP_000775875.1\|2108889_2110179_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_000770645.1\|2110256_2111504_-	transporter	NA	NA	NA	NA
WP_000434961.1\|2111693_2112545_-	transcriptional regulator Rgg	NA	NA	NA	NA
WP_001204054.1\|2112668_2113010_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_000137358.1\|2113263_2114967_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_000986404.1\|2115199_2116132_-	transketolase family protein	NA	NA	NA	NA
WP_000603779.1\|2116128_2116986_-	transketolase	A0A2K9L6P9	Tupanvirus	7.1e-29	31.2
WP_000975287.1\|2116989_2118336_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_000912476.1\|2118348_2118633_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_000460921.1\|2118636_2120667_-	BglG family transcription antiterminator	NA	NA	NA	NA
WP_000136836.1\|2120857_2121865_+	SPFH domain-containing protein	NA	NA	NA	NA
WP_000796544.1\|2121867_2122068_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_000290419.1\|2122219_2122402_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_001265622.1\|2122417_2122567_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_001824784.1\|2123136_2124483_-\|transposase	IS1380-like element ISSpn5 family transposase	A0A1X9I6F6	Streptococcus_phage	7.6e-78	40.0
WP_000753882.1\|2124754_2126680_-\|holin	choline-binding protein PcpA	NA	NA	NA	NA
WP_000647052.1\|2127605_2127995_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

2217899 : 2226653

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000510413.1\|2217899_2218739_-	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	1.1e-13	27.6
WP_000835715.1\|2218723_2219551_-	energy-coupling factor transporter ATPase	W8CYL7	Bacillus_phage	3.5e-17	33.3
WP_000712132.1\|2219547_2220093_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_001227958.1\|2220103_2220925_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000170212.1\|2220966_2222250_-	insulinase family protein	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	8.4e-18	30.0
WP_000424271.1\|2222246_2223497_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	2.7e-93	42.3
WP_000455903.1\|2223655_2224024_+	S4 domain-containing protein YaaA	A0A1X9I5V8	Streptococcus_phage	7.0e-18	57.3
WP_000266660.1\|2224026_2225124_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_000073428.1\|2225174_2226653_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.2e-94	40.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014498

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection