CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017631	Escherichia coli ABU 83972, complete sequence	3 crisprs	cas14j,DinG,cas3,DEDDh,csa3,WYL	0	1	9	0
NC_017629	Escherichia coli ABU 83972 plasmid pABU, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_017631_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017631_1

379810-379887

Orphan

Consensus_repeat	Method
TTCGAAATAATCAATGGGTTAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017631_1

>merge|NC_017631|1|379810-379887|CRISPRCasFinder
TTCGAAATAATCAATGGGTTAGGCTTACCTCCCCCCATTTCCTGCATTGCAGGTTTTCGAAAGAATCAATGGGTTAGG

>NC_017631|1|1|379810-379887|CRISPRCasFinder
TTCGAAATAATCAATGGGTTAGG	CTTACCTCCCCCCATTTCCTGCATTGCAGGTT
TTCGAAAGAATCAATGGGTTAGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_017631.1\|WP_001244105.1\|367924_370681_+\|TOPRIM-and-DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
NC_017631.1\|WP_001034006.1\|381695_385826_-\|vacuolating-autotransporter-toxin-Vat	unknown	unknown	gnl\|CDD\|367071
NC_017631.1\|WP_001018526.1\|371265_371427_+\|hypothetical-protein	unknown	unknown	unknown
NC_017631.1\|WP_000146239.1\|387535_387673_+\|hypothetical-protein	unknown	unknown	unknown
NC_017631.1\|WP_042025458.1\|376096_376486_-\|hypothetical-protein	unknown	unknown	unknown
NC_017631.1\|WP_000420674.1\|371443_371905_+\|DUF2824-family-protein	unknown	unknown	gnl\|CDD\|371353
NC_017631.1\|WP_001131117.1\|391746_394272_-\|fimbrial-usher-EcpC	unknown	unknown	gnl\|CDD\|374266
NC_017631.1\|WP_001059463.1\|381045_381540_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182795
NC_017631.1\|WP_001029844.1\|373972_376078_+\|hypothetical-protein	unknown	unknown	unknown
NC_017631.1\|WP_001295798.1\|389434_390145_-\|fimbrial-chaperone-EcpE	unknown	unknown	unknown
NC_017631.1\|WP_000909173.1\|371898_372552_+\|hypothetical-protein	unknown	unknown	unknown
NC_017631.1\|WP_000246960.1\|372551_373973_+\|phage-DNA-ejection-protein	unknown	unknown	gnl\|CDD\|293533
NC_017631.1\|WP_000716404.1\|394297_394966_-\|fimbrial-chaperone-EcpB	unknown	unknown	gnl\|CDD\|376075
NC_017631.1\|WP_000617441.1\|379301_379589_+\|PerC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|310570
NC_017631.1\|WP_001265646.1\|390113_391757_-\|fimbrial-adhesin-EcpD	unknown	unknown	unknown
NC_017631.1\|WP_001019923.1\|387935_388550_+\|YagU-family-protein	unknown	unknown	gnl\|CDD\|226008
NC_017631.1\|WP_001443224.1\|388798_389128_-\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|223799
NC_017631.1\|WP_001528727.1\|377728_378685_-\|hypothetical-protein	unknown	unknown	unknown
NC_017631.1\|WP_000098670.1\|377278_377716_-\|hypothetical-protein	unknown	unknown	unknown
NC_017631.1\|WP_000772639.1\|380272_380611_+\|DUF4102-domain-containing-protein	unknown	unknown	gnl\|CDD\|379139

Protein	Function_ID	Function_description	E-value
NC_017631.1\|WP_001244105.1\|367924_370681_+\|TOPRIM-and-DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	4.18473e-139
NC_017631.1\|WP_000246960.1\|372551_373973_+\|phage-DNA-ejection-protein	gnl\|CDD\|293533	pfam16928, Inj_translocase, DNA/protein translocase of phage P22 injectosome. Inj_translocase is a family of putative phage translocases that are involved in the injectosome mechanism. Phage P22 of Salmonella typhimurium ejects four proteins, gp7, gp16, gp20 and gp26, which are ejected from the phage virion into the bacterial cell after absorption. These four proteins may play a role in DNA ejection.	1.37804e-57
NC_017631.1\|WP_001131117.1\|391746_394272_-\|fimbrial-usher-EcpC	gnl\|CDD\|374266	pfam15976, CooC_C, CS1-pili formation C-terminal. CooC_C is a highly conserved C-terminal domain on fimbrial outer membrane usher proteins like TcfC. The protein is required for CS1 pilus formation.	3.39908e-32
NC_017631.1\|WP_000617441.1\|379301_379589_+\|PerC-family-transcriptional-regulator	gnl\|CDD\|310570	pfam06069, PerC, PerC transcriptional activator. PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.	5.67593e-28
NC_017631.1\|WP_000772639.1\|380272_380611_+\|DUF4102-domain-containing-protein	gnl\|CDD\|379139	pfam13356, Arm-DNA-bind_3, Arm DNA-binding domain. This DNA-binding domain is found at the N-terminus of a wide variety of phage integrase proteins.	2.85835e-23
NC_017631.1\|WP_000420674.1\|371443_371905_+\|DUF2824-family-protein	gnl\|CDD\|371353	pfam11039, DUF2824, Protein of unknown function (DUF2824). This family of proteins has no known function. Some members in the family are annotated as the P22 head assembly protein gp14 however this cannot be confirmed.	1.3959e-69
NC_017631.1\|WP_001034006.1\|381695_385826_-\|vacuolating-autotransporter-toxin-Vat	gnl\|CDD\|367071	pfam02395, Peptidase_S6, Immunoglobulin A1 protease. This family consists of immunoglobulin A1 protease proteins. The immunoglobulin A1 protease cleaves immunoglobulin IgA and is found in pathogenic bacteria such as Neisseria gonorrhoeae. Not all of the members of this family are IgA proteases, EspP from E. coli O157:H7 cleaves human coagulation factor V and hbp is a hemoglobin protease from E. coli EB1.	4.24082e-102
NC_017631.1\|WP_001443224.1\|388798_389128_-\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	8.49663e-23
NC_017631.1\|WP_001059463.1\|381045_381540_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|182795	PRK10870, PRK10870, transcriptional repressor MprA; Provisional.	9.32192e-22
NC_017631.1\|WP_000716404.1\|394297_394966_-\|fimbrial-chaperone-EcpB	gnl\|CDD\|376075	pfam18649, EcpB_C, EcpB C-terminal domain. This is an immunoglobulin like domain found at the C-terminal region of EcpB. It is a periplasmic chaperone which along with EcpE help assemble the E. coli common pilus (ECP) EcpA and EcpD subunits. The C-terminal domain is predicted to contain residues that might be involved in binding a C-terminal carboxylate anchor.	2.72814e-43
NC_017631.1\|WP_001019923.1\|387935_388550_+\|YagU-family-protein	gnl\|CDD\|226008	COG3477, COG3477, Predicted periplasmic/secreted protein [Function unknown].	1.08208e-78

>NC_017631.1|WP_000617441.1|379301_379589_+|PerC-family-transcriptional-regulator
MIRDRKAEELESKGLYRRAAARWAEVMMLANGDKEREHAANRRSECIRKAARPPATTDRFGDLRQAVKRTHSALGMDEEARGYFRRYRDKDCQRQ
>NC_017631.1|WP_001528727.1|377728_378685_-|hypothetical-protein
MTVAPKDQSLKSVRVGFYTSSENIRTSNKGLTAEAFKNLYDRCSKDFKMTHYADFGERELKIHFLDISPEDGSYFGFMSRRRKSATLAYITDKEWVEEKIPLAGAKTLSERTYFIYYPQTDILVLSLNHLGPRHSDLAFLLFNSSDRGVPVSFEAIWKEESIKELLETGSNLRSCEISVAIPRNFNAAQYQLDGMFANQMIEMIRGTSSSHLTISLRGHSPLKRKAKGWLEDDVKKSLKEMLEKFPGGDGRLTFEKANVVAQGDKKKKSLVDEVLTVKKMVPIQADGYPTDTDVKNAMLQAKNDNLRYLTQYYLVSQT
>NC_017631.1|WP_000098670.1|377278_377716_-|hypothetical-protein
MSSRKLFAAKSLFALAMAIAGAHFLHDLDHNAVISAAGALSTISGVLFGFVLASVTMLSSFDSSKGIVGALKSNGVLKGIIEGLFDTGTTLITACLLAMISMFAPVVSNLPLDYYALLLAGAYLIISMITFFFNWKSLSKIISYI
>NC_017631.1|WP_042025458.1|376096_376486_-|hypothetical-protein
MIANLNNAKGRVGVNAQAVIMVFLGLIVAKLYPDWWKGALATVAIYLLLSVVKRSFAKTINQAKRFSFKNLINYITGLIFCLSILIASAFLPVSIANFFGASYEVGYLFSVFCLVLALLYLWMRAKNKN
>NC_017631.1|WP_001029844.1|373972_376078_+|hypothetical-protein
MAKAWKDVIASPQYQALAPEQKAQAQEQYFNEVVAPQAGESVEQAKQAFYAAYPLPSTNEIDRSQSATQNIQHTSSDNSLASGYAKLATQQREGLERSAEQGASLGAAMRDAITGESRMTPEMERLQNVASAPELNSLSMDALKAGWSQLFGSDASQEKILQGMGATLRQDEKGNTIVSLPSGDYALNKPGLSPQDLTSFLANALAFTPAGRAGTVLGAIGKSAATDLALQGATSLAGGEDIDPLQTVISAGIGGIGKGLENTASAVSRAVRGDMSPEAKAAVDFASERNLPLMTSDMLKDKTFMQSQAQTLGERVPFFGTGKNRLNQQQARENLVRTFSDGLGGISDKQLYESATKGQQKFIEAAGKRYNRIIDAMGDTPVDLSNTVKAIDNQIAVLSRPGKSQDRAAVKVLQQFKDDITSGPNDLRLARENRTDLRKRFMASSDTVDKDTLQKASDIIYKAYTADMKKAVAKNLGADEAINMARVDRSWSKFNDMMGRTRVQKAIASGKATPEDVTKLVFSQSPSERSQLYRLLDDNGRQNARAAIVQNAVDKATDPSGNISVEKFINALHRNRKQSATFFKGVHGKELDGVIKYLNDTRHAAKANVQNLNGQQLYGLLVGGGIINAAVLAGMLKTAAFVVPAAGAVGGAAKAYESPVIRNALLRLANTPKGSTAYDRAISTVTQSLTRVAQASQKEAQ
>NC_017631.1|WP_000246960.1|372551_373973_+|phage-DNA-ejection-protein
MATWQLGGLPSMAPQNDNAPRSSVPQPVQYQQQPNVGLMALQGLRGVAEINQQARQQQRKAEFQKAYAGAFESGDRNKMRSLISEYPEEFESVQKGMGFIDDDQRNSIGHLATSAQIASSLGTGAFGKFIADNEDEMRRLGISPESVAEMHVNDPQGFQRLAGSMALFSLGHEKYFDIKDQMEGRDIERGKLAETIRSNQAGEALQARGQDISRANALTSAYAPTAAMQNYNQYAQMLKADPEGAAAFAAAAGINTNAKKLMSVRENDDGTVTKYYTDGSEEQGKLNQPISGDGFRPIALPTAQKIMEKSPEGAKKAAGFAYRVRDALDSIDTLKDQLSPQRVAIINNALGNGTLANLTLSPIEQQYVVNANDAIMAILRQETGASILPAEMSKYYQMYFPQPGDSTKTIDTKRRKMENQFNSLKAASGRAYDALRVISAVDRGTSSSSQTLPQSEQVSQPAASSNFSSLWGD
>NC_017631.1|WP_000909173.1|371898_372552_+|hypothetical-protein
MLITHIAHKHLNRAVYEKGGDGGASKAQAKAQQQAIDLQREQWNTVMNNLKPYAEVGLPALQQLQGLMTLEGQNKAANDFFGSGLYKTQADQARYQNLVSAEATGGLGSTATSNQLSSIAPMLYNNWLSGQMQNYGNLLNVGMNAASGQATAGQLLQGLGAIRAGQAQQPSSLARGIGGAASGALAGAQLGSVVPGIGNVAGAIGGGLIGLVGGLGF
>NC_017631.1|WP_000420674.1|371443_371905_+|DUF2824-family-protein
MELKFIDNPVRLQAFLNEPGNTENIVEPGHTYYIKPDAVYLGIYEGLVLAGVHEVRNFWHSVVECHAVYDPGFRGEYALQGHRLFCKWLLENSPFLNSITMVPDTTKYGRAIIRLLGATRVGHLDDAYIRCGKPVGVTLYQLTRQQYKEFSEC
>NC_017631.1|WP_001018526.1|371265_371427_+|hypothetical-protein
MAISVKQVLISEKQMEAIKKIQEEQRKKSGIGVAPTLHEIARGLIDKALAGCM
>NC_017631.1|WP_001244105.1|367924_370681_+|TOPRIM-and-DUF927-domain-containing-protein
MRNIDLIRQVISASENNWPHVLGCLNINVPDSPRRHAPCPACGGKDRFRFDDNGRGSFICNQCGAGDGLDLIKRVNNCDTTEAALLAADVLGIDYRTTETPEATSQKREQLETERQRREQERLKRAEKDEQQRRDTFSRQFDDMRRKAVNGKSDYLVAKGVGDFTFPVLPDGSLLLALVDKSGAVTAAQTITSHGEKRLLTGSAKRGAYHAINAPETTQSILIAEGLATALSAHLIRPEALTVAAIDAGNLLYVAQVLRDKFPSAQIIIAADNDHSEGRQNTGRIAAEKAALSVSGWVALPPTDHKADWNDYHQKHGIKCATEAFNKSMYQPQGNGVKQEPQTIEGSDFKVMDTDPLKPRIESREDGIYWVSPRADSQSGEIINNESWLCSPLSVIGTGRDDKDQYLILRWLSFGSETPTTAAIPLADIGEREGWRTLKAGGVNVTTKSSLRAILADWLQRSGSRELWRVAHATGWQCGAYIMPDGEIIGTPENPVLFSGRSSAAAGYTVLGSAKSWRDNVARLAFGNYSMMTGIGAALAAPLIGLVGADGFGIHFYEQSSAGKTTTANVASSLYGNPDLLRLTWYGTALGLANEAAAHNDGLMPLDEVGQGADPVSVSQSAYALFNGVGKLQGAKDGGNRDLKRWRTVAISTGEMDLETFIATSGRKTKAGQLVRLLNIPLSKAVRFHDYQNGKQHADALKDAYQHHHGASGREWIKWLADHQQQAIKTVRDCESRWRSLIPSDYGEQVHRVAARFAILEAALLLGEVVTGWDAQTCRDAIQHSYNAWLREFGTGNKEHQQIIEQTEAFLNAYGLSRFAPFPYSPADLPIKDLAGYRQRGEHDESPMIFYTFPATFEKEIACGFNAKQFAEVLKKAGMLTPPNSGRGYQRKSPRIQGRQINVYVLNYQPGDYNSSEE
>NC_017631.1|WP_000772639.1|380272_380611_+|DUF4102-domain-containing-protein
MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPGGGEYWRLKYRVAGKEKLLALGVYPEVTLADAPAKLEEAKRGISGGIDLMEVKREEKIARETQLNNTFKDIALEWHSNKL
>NC_017631.1|WP_001059463.1|381045_381540_-|MarR-family-transcriptional-regulator
MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVLVSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEKKNIAKRINNKNDRRSKSICLTPDGVTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLNVN
>NC_017631.1|WP_001034006.1|381695_385826_-|vacuolating-autotransporter-toxin-Vat
MNKIYALKYCYITNTVKVVSELARRVCKGSTRRGKRLSVLTSLALSALLPTVAGASTVGGNNPYQTYRDFAENKGQFQAGATNIPIFNNKGELVGHLDKAPMVDFSSVNVSSNPGVATLINPQYIASVKHNKGYQSVSFGDGQNSYHIVDRNEHSSSDLHTPRLDKLVTEVAPATVTSSSTADILNPSKYSAFYRAGSGSQYIQDSQGKRHWVTGGYGYLTGGILPTSFFYHGSDGIQLYMGGNIHDHSILPSFGEAGDSGSPLFGWNTAKGQWELVGVYSGVGGGTNLIYSLIPQSFLSQIYSEDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNGQIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIGEGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNPDNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTRPADVKVNEWSSSNRGTVGSLYIYNNPYTHTVDYFILKTSSYGWFPTGQVSNEHWEYVGHDQNSAQALLANRINNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMSGTFTQENGRLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFGLGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVNLDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENSTLTSTALNLNKGANVLASQSFVSDGPVNISDATLSLNSRPDEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINVQDKGTVTLGGEGELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNGNSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHDNSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEWVLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSGSADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYASGLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQAELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYEFDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDDAINANIRYSF
>NC_017631.1|WP_000146239.1|387535_387673_+|hypothetical-protein
MASGLICHGGFEPHAWGVASLMDVTVLVVASLLVWLLVNRENHYA
>NC_017631.1|WP_001019923.1|387935_388550_+|YagU-family-protein
MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNSAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGSNR
>NC_017631.1|WP_001443224.1|388798_389128_-|YkgJ-family-cysteine-cluster-protein
MSNLNPCMTCGACCAFFRISFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGQNACCTIYENRSSTCREFAMSGENGEVNEACNRARAKYGLTPL
>NC_017631.1|WP_001295798.1|389434_390145_-|fimbrial-chaperone-EcpE
MFRRRGVTLTKALLTVVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFREVPTRNLTKRSPSGGEVSTEPVVVMDTILVVRPRQVQFKWSFDQVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD
>NC_017631.1|WP_001265646.1|390113_391757_-|fimbrial-adhesin-EcpD
MRVNLLIAMIIFALIWPATALRAAVSKTTWADAPAREFVFVENNSDDNFFVTPGGALDPRLTGANRWTGLKYNGSGTIYQQSLGYIDNGYNTGLYTNWKFDMWLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLSDAFYQYLQQMPVGSSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSRSGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTTSPESGWYEFSTSNTLIIKPRDFSISIISDEYTQTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCVFSSDDGKAKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWLTTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN
>NC_017631.1|WP_001131117.1|391746_394272_-|fimbrial-usher-EcpC
MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYIHLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASVSEQTRQQLTTLANAPFNEALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSEDIGQSSVNTLSSNLSYNFGVYNNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRFAGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLTRDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEVIVNGRVISKRTQRVNKLFSRGRGVGAPLAWQIWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSLSTFSWAATGYGYDNQAVGETRLTLPLGGAINVNLQNMLASDSSWSNIAGISATLPGGFSSLWVNQEKTRIGNQLRRSDADNRAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQSVYSGTFGSLGLRAGIQRYNNGDSSANTGKYIALDLSLPLGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSRAISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYINTNLTANGSVGWQGKNIAASGRTDGNAGVIFDTGLENDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSYDIVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFRYSGNKTCEVALELNQARGAVWVGDVVCSGLSSWAAVTQTGEENES
>NC_017631.1|WP_000716404.1|394297_394966_-|fimbrial-chaperone-EcpB
MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIQNSTDSGRLINIRLERLSSPLDDGQVIAMDKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLTNTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_017631_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017631_2

2604820-2604933

Orphan

Consensus_repeat	Method
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017631_2

>merge|NC_017631|2|2604820-2604933|CRISPRCasFinder
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCACTGGATGCCCAGATGCGGCATGAACGCCCTACCCAGCCTACGATGCGGTTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA

>NC_017631|2|2|2604820-2604933|CRISPRCasFinder
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA	CTGGATGCCCAGATGCGGCATGAACGCCCTACCCAGCCTACGATGCGG
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_017631.1\|WP_000135040.1\|2606087_2606342_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NC_017631.1\|WP_001281253.1\|2594406_2597034_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NC_017631.1\|WP_001104503.1\|2585761_2587411_-\|YfaQ-family-protein	unknown	unknown	gnl\|CDD\|227732
NC_017631.1\|WP_000012317.1\|2592569_2594258_-\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NC_017631.1\|WP_000140607.1\|2614217_2615144_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NC_017631.1\|WP_001000377.1\|2612834_2614025_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NC_017631.1\|WP_000332036.1\|2604957_2606088_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NC_017631.1\|WP_000948732.1\|2608329_2609688_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NC_017631.1\|WP_001075170.1\|2602482_2604768_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NC_017631.1\|WP_000786563.1\|2583722_2584907_+\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NC_017631.1\|WP_000779093.1\|2607248_2608325_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NC_017631.1\|WP_000990759.1\|2597180_2597903_+\|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG	unknown	unknown	gnl\|CDD\|235350
NC_017631.1\|WP_016265893.1\|2598042_2601801_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NC_017631.1\|WP_001209933.1\|2611578_2612838_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NC_017631.1\|WP_001225880.1\|2584980_2585757_-\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NC_017631.1\|WP_000536597.1\|2587411_2591926_-\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NC_017631.1\|WP_001297934.1\|2591949_2592573_-\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NC_017631.1\|WP_000301034.1\|2606395_2607046_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NC_017631.1\|WP_000857226.1\|2609960_2611589_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NC_017631.1\|WP_000992976.1\|2615184_2615988_-\|2-keto-3-deoxy-L-rhamnonate-aldolase	unknown	unknown	gnl\|CDD\|182257

Protein	Function_ID	Function_description	E-value
NC_017631.1\|WP_000135040.1\|2606087_2606342_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NC_017631.1\|WP_001281253.1\|2594406_2597034_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NC_017631.1\|WP_001104503.1\|2585761_2587411_-\|YfaQ-family-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	2.66557e-125
NC_017631.1\|WP_000012317.1\|2592569_2594258_-\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NC_017631.1\|WP_000140607.1\|2614217_2615144_+\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NC_017631.1\|WP_001000377.1\|2612834_2614025_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NC_017631.1\|WP_000332036.1\|2604957_2606088_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NC_017631.1\|WP_000948732.1\|2608329_2609688_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NC_017631.1\|WP_001075170.1\|2602482_2604768_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NC_017631.1\|WP_000786563.1\|2583722_2584907_+\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NC_017631.1\|WP_000779093.1\|2607248_2608325_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NC_017631.1\|WP_000990759.1\|2597180_2597903_+\|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	3.07882e-170
NC_017631.1\|WP_016265893.1\|2598042_2601801_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NC_017631.1\|WP_001209933.1\|2611578_2612838_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NC_017631.1\|WP_001225880.1\|2584980_2585757_-\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	2.9978e-151
NC_017631.1\|WP_000536597.1\|2587411_2591926_-\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NC_017631.1\|WP_001297934.1\|2591949_2592573_-\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	4.78627e-139
NC_017631.1\|WP_000301034.1\|2606395_2607046_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	1.02722e-157
NC_017631.1\|WP_000857226.1\|2609960_2611589_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NC_017631.1\|WP_000992976.1\|2615184_2615988_-\|2-keto-3-deoxy-L-rhamnonate-aldolase	gnl\|CDD\|182257	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional.	0

>NC_017631.1|WP_001075170.1|2602482_2604768_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NC_017631.1|WP_016265893.1|2598042_2601801_-|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIISLRKEYLSLLPSMIASLFSANGAAAVIDSCQGYDIKANCQASRQSLSGNMQDWSIADGQWLIFSGMANNASGGAVFLQHSAEFTISPQNETGMTLFADNSVSGEYNNGGAIFAKENSTINLANVIFDSNVAGGYGGAIYSAGTNDTGAADLRVTNAVFHNNIANDGKGGAIYTINNDVYLSDDAFNNNQAYTSTSYSDGDGGAIDVTDNSTDNTHLSGKTIINNTSFTNNYAEGYGGAIYTSSTTSPYLIDISVDDNYDQNNGVMIDENNSASGYDHSATAAAGGFMYIGHSVAEFNIAADKTLVIGNTSNDGAIDSLAGTGVIVKEGAGELVLNADNNAFTGEMSIQNGEVTLGRSDELMNVGDTHCQSDPQDCFGLMVGSTVHSEYQAELNVGNTQQTFVHSLTGFANGILNIDAGGNVTVNQGGFSGSIQGEGQLTVAQDGSYLLTGAQSMALTGDIVVEDNAVLSLAGNQADLRAMQSDPQSIVLNGGVLDLSDFTTWDGDSSYNDGLQISGSGGTVIGSNDVVDISSGDDLHIGGSDASQNGVYVVINAGDQRVTLANNNGYLGNTQIASGTLEVSDNSQLGDTSYNRSVIFTDPQQHSEMDVTTDVDTRSATTGQGRNIEMRADGEIHVEDGVDTQWGGLMADSTGQQLDSVSTLTKSGGGTLELTASGTATSAVRVEDGTLKGEAENIIPYVSSLWVGEDGVFETGQNQDIRSIDATSGGDIDITDGTVLRLTQQDTNQALDASLFSGDGTLVNATDGVTLAGELNTNLETDSLTYLSDVTVNGNLTNTSGAISLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSASDQLVLNGNTAGNTAVVINPITGIGEPTSTGIKVVDFAADPAQFQNNAQFSLTGSGYVNMGAYDYTLVEDNNDWYLRSQEVNPTPPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYFNNLRAANQAFVMERRDHAGGDGQTLNLRVIGGRYHYTAVGQLAQHEDTSTVQLSGNLFSGHWGDDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGVDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVSVTPTLDLNYYHDPHATEIEEDGSTISDDAAKQRGEIKVGITGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NC_017631.1|WP_000990759.1|2597180_2597903_+|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG
MNAEKSPVNHNVDHEEIAKFEAVASHWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHMTGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NC_017631.1|WP_001281253.1|2594406_2597034_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NC_017631.1|WP_000012317.1|2592569_2594258_-|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPKKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRWETRFGLEARTAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMVDVIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NC_017631.1|WP_001297934.1|2591949_2592573_-|DUF1175-domain-containing-protein
MRHGLLVLICWLYCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANEALKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYIIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NC_017631.1|WP_000536597.1|2587411_2591926_-|alpha-2-macroglobulin-family-protein
MGTGLANADDSLPSSNYVPPAGGTFFLLADSSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPVEPQQGVKLEGASSNFISPQPGNIYIPLGKQEPGLYLVEAIVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKTGSEILWTDGLGVMTRGVTDGSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRKQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDDNGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGELVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTSHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKSLYMKWSMPTVYRMGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALTLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGVRFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTSDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEYWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAGKQQGQLLEKARNEMGELAYMLPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAPGSEWTGMQVK
>NC_017631.1|WP_001104503.1|2585761_2587411_-|YfaQ-family-protein
MNWRRIVWLLALVTLPTLAEETPLQLALRGAQHDQLYQLSSSGVTKVSALPDTLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIDVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWATGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVLVDLFARYPLKKVTEEKSTTAFKPGVLNGRYRVTFANGNHMTFVSHGETTLLTVKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRVTEGTLSWRHATAQAGQGERYDQILAFAYPDNNLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NC_017631.1|WP_001225880.1|2584980_2585757_-|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQTINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGAGAIRARLRLVLSWDTDNTDLDLHVVTPDGEYAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NC_017631.1|WP_000786563.1|2583722_2584907_+|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSTIDLGATVIKAAIERAKIDSLHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESSALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFEPEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>NC_017631.1|WP_000332036.1|2604957_2606088_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>NC_017631.1|WP_000135040.1|2606087_2606342_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NC_017631.1|WP_000301034.1|2606395_2607046_-|lipopolysaccharide-kinase-InaA
MAVSAKHDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKVEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NC_017631.1|WP_000779093.1|2607248_2608325_-|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNVLEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NC_017631.1|WP_000948732.1|2608329_2609688_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NC_017631.1|WP_000857226.1|2609960_2611589_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGINAEAIEPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGEIQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEATLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NC_017631.1|WP_001209933.1|2611578_2612838_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYTLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLIIDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFVVLASGSFFSGGLVAERDGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDEALRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHVAQQIAQRAGGQQ
>NC_017631.1|WP_001000377.1|2612834_2614025_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NC_017631.1|WP_000140607.1|2614217_2615144_+|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSEGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGEASPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKLEGLQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH
>NC_017631.1|WP_000992976.1|2615184_2615988_-|2-keto-3-deoxy-L-rhamnonate-aldolase
MNALLTNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRVKGSY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_017631_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017631_3

4919565-4919704

Orphan

Consensus_repeat	Method
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017631_3

>merge|NC_017631|3|4919565-4919704|CRISPRCasFinder
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACAGCCTTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA

>NC_017631|3|3|4919565-4919704|CRISPRCasFinder
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACA	GCCTTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACGAGTTCAGTGC
TGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA

Protein	Signature genes	Signature genes Name	Protein_function
NC_017631.1\|WP_000397144.1\|4919720_4921232_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NC_017631.1\|WP_001197423.1\|4928658_4929690_-\|L-idonate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|182130
NC_017631.1\|WP_000584114.1\|4921498_4922599_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NC_017631.1\|WP_000786399.1\|4919019_4919463_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NC_017631.1\|WP_000416368.1\|4916164_4919020_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NC_017631.1\|WP_000012936.1\|4912474_4913479_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NC_017631.1\|WP_001298035.1\|4914234_4914738_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_017631.1\|WP_000635216.1\|4911977_4912430_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
NC_017631.1\|WP_001000681.1\|4914930_4916118_+\|DUF898-family-protein	unknown	unknown	gnl\|CDD\|226719
NC_017631.1\|WP_000896740.1\|4929906_4930470_+\|gluconokinase	unknown	unknown	gnl\|CDD\|182097
NC_017631.1\|WP_000235828.1\|4908108_4909113_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179366
NC_017631.1\|WP_000002950.1\|4913640_4914057_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NC_017631.1\|WP_001128336.1\|4926486_4927806_-\|gnt-II-system-L-idonate-transporter	unknown	unknown	gnl\|CDD\|129873
NC_017631.1\|WP_001346533.1\|4910079_4911300_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
NC_017631.1\|WP_000428627.1\|4909136_4910069_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|183466
NC_017631.1\|WP_001528388.1\|4930473_4931493_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NC_017631.1\|WP_000042801.1\|4923841_4925344_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NC_017631.1\|WP_001304655.1\|4925421_4926420_-\|DNA-binding-transcriptional-regulator-IdnR	unknown	unknown	gnl\|CDD\|380489
NC_017631.1\|WP_000998695.1\|4927870_4928635_-\|gluconate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|181225
NC_017631.1\|WP_001295681.1\|4922598_4923681_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900

Protein	Function_ID	Function_description	E-value
NC_017631.1\|WP_000397144.1\|4919720_4921232_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NC_017631.1\|WP_001197423.1\|4928658_4929690_-\|L-idonate-5-dehydrogenase	gnl\|CDD\|182130	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional.	0
NC_017631.1\|WP_000584114.1\|4921498_4922599_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NC_017631.1\|WP_000786399.1\|4919019_4919463_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
NC_017631.1\|WP_000416368.1\|4916164_4919020_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NC_017631.1\|WP_000012936.1\|4912474_4913479_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NC_017631.1\|WP_001298035.1\|4914234_4914738_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.51706e-18
NC_017631.1\|WP_000635216.1\|4911977_4912430_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	4.82284e-65
NC_017631.1\|WP_001000681.1\|4914930_4916118_+\|DUF898-family-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	3.07847e-106
NC_017631.1\|WP_000896740.1\|4929906_4930470_+\|gluconokinase	gnl\|CDD\|182097	PRK09825, idnK, gluconokinase.	2.59086e-125
NC_017631.1\|WP_000235828.1\|4908108_4909113_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
NC_017631.1\|WP_000002950.1\|4913640_4914057_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	7.57352e-69
NC_017631.1\|WP_001128336.1\|4926486_4927806_-\|gnt-II-system-L-idonate-transporter	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NC_017631.1\|WP_001346533.1\|4910079_4911300_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NC_017631.1\|WP_000428627.1\|4909136_4910069_-\|carbamate-kinase	gnl\|CDD\|183466	PRK12354, PRK12354, carbamate kinase; Reviewed.	0
NC_017631.1\|WP_001528388.1\|4930473_4931493_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.39242e-169
NC_017631.1\|WP_000042801.1\|4923841_4925344_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NC_017631.1\|WP_001304655.1\|4925421_4926420_-\|DNA-binding-transcriptional-regulator-IdnR	gnl\|CDD\|380489	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding, which in turn changes the DNA binding affinity of the repressor.	1.9949e-108
NC_017631.1\|WP_000998695.1\|4927870_4928635_-\|gluconate-5-dehydrogenase	gnl\|CDD\|181225	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional.	0
NC_017631.1\|WP_001295681.1\|4922598_4923681_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0

>NC_017631.1|WP_000786399.1|4919019_4919463_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NC_017631.1|WP_000416368.1|4916164_4919020_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDIYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NC_017631.1|WP_001000681.1|4914930_4916118_+|DUF898-family-protein
MNDVNIGKDNSRHSFVFTGKGGEYFLICLVNFLLTIITLGIYGPWALIKCRRYIYQHVTLKGQPFSYKGTGGAIFVSMLLIVVVYLLSISCFAGQHFALGLFLFALLICGIPCMAVKSLQYQANMTSLNDIRFGFNCSMMRAWWVMLGLPVLLALVFWFALYLIAQVTTSIGGLFFNLVALSLLSAIGLGVVHGITYSKWMPLLGNNATFGIHKFSIQVNVKECIKGCMLAILTMVPFIIVIGIMIAPVFQQLMMMTMLGGSDAGSEFVLQYYPQIMASYFLYFVAILVFASYLYVTLRNLFLNNLTLANGTIRFHSSVTAIGMLLRMLAVLMGSSITCGLAYPWLKMWMVSWIANNTHVQGDLDSLELTNDDKPQDSGSLMWISRGIMPYVPFI
>NC_017631.1|WP_001298035.1|4914234_4914738_-|GNAT-family-N-acetyltransferase
MNVVASPALRLRKLTVADNPAIAHVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLRKL
>NC_017631.1|WP_000002950.1|4913640_4914057_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGDDGDDEDFVDEDDDGIRH
>NC_017631.1|WP_000012936.1|4912474_4913479_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEARLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVAECSALAQKHGGKITLTEDIASGVKGADFIYTDVWVSMGEPKEKWAERIALLRDYQVNSKMMALTGNSQVKFLHCLPAFHDEQTTLGKKMAAEFGLYGGMEVTDEVFESPASIVFDQAENRMHTIKAVMVATLAK
>NC_017631.1|WP_000635216.1|4911977_4912430_+|YhcH/YjgK/YiaL-family-protein
MIVGNIHHLQSWLPEELREAIEYIKSHVSDETAKGKHAIDGDRLFYLISEDTTEPGELRRAEYHARYLDIQIVLKGQEGMTFSTQPAGVPETDWLADKDIAFIGQGIDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKLLKS
>NC_017631.1|WP_001346533.1|4910079_4911300_-|arginine-deiminase
MEKHYVGSEIGQLRSVMLHRPNLSLKRLTPSNCQELLFDDVLSVERAGEEHDIFANTLRQQGIEVLLLTDLLTQTLDIPEAKSWLLETQISDYRLGPTFATDVRTWLAEMSHRDLARHLSGGLTYSEIPASIKNMVVDTHDINDFIMKPLPNHLFTRDTSCWIYNGVSINPMAKPARQRETNNLRAIYRWHPQFAGGEFIKYFGDENINYDHATLEGGDVLVIGRGAVLIGMSERTTPQGIEFLAQALFKHRQAERVIAVELPKHRSCMHLDTVMTHIDIDTFSVYPEVVRPDVNCWTLTPDGHGGLKRTQESTLLHAIEKALGIDQVRLITTGGDAFEAEREQWNDANNVLTLRPGVVVGYERNIWTNEKYDKAGITVLPIPGDELGRGRGGARCMSCPLHRDGI
>NC_017631.1|WP_000428627.1|4909136_4910069_-|carbamate-kinase
MENKPTLVIALGGNALLKRGEPLEAEIQRKNIDLAAKTIAQLTQHWRVVLVHGNGPQVGLLALQNSAYAHVAPYPLDILGAESQGMIGYMLQQALKNQLPQREISVLLTQVEVDANDPAFSNPTKYIGPIYDHAQTQVLQAEKGWVFKADGHSFRRVVPSPQPKRIVERDAIQTLIAHDHLVICNGGGGVPVVEKADGYHGIEAVIDKDLSAALLASQIHADALLILTDADAVYLDWGKPTQRPLAQVTPELLNEMQFDAGSMGPKVTACAKFVSQCRGIAGIGSLADGPEILAGDKGTLIRLDTPHNHA
>NC_017631.1|WP_000235828.1|4908108_4909113_-|ornithine-carbamoyltransferase
MATSLKNRNFLKLLDYTPAEIQYLIDLAINLKAAKKSGNEKQTLVGKNIALIFEKSSTRTRCAFEVAAFDQGAQVTYIGPSGSQIGHKESMKDTARVLGRMYDGIEYRGYGQNIVEELGEFAGVPVWNGLTNEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPDEALVTQCREIASVTGARITLTEDVEEGVYDVDFLYTDVWVSMGEPKEAWAERVSLMAPYQINQQVITATRNPEVKFMHCLPAFHNEHTTVGREIEMAYGLKGLEVTEEVFESAHSIVFDEAENRMHTIKAVMVATLGD
>NC_017631.1|WP_000397144.1|4919720_4921232_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NC_017631.1|WP_000584114.1|4921498_4922599_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NC_017631.1|WP_001295681.1|4922598_4923681_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NC_017631.1|WP_000042801.1|4923841_4925344_-|DUF853-domain-containing-protein
MSKPLLIARTLDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAAEGTASEKLLARLKNIGVNDWQPHTNPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHLFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRPNPTFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLVNHSPVYGKYEDDVDRESAYEMLQKGFQASIEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>NC_017631.1|WP_001304655.1|4925421_4926420_-|DNA-binding-transcriptional-regulator-IdnR
MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSYTLGILIPSFQNQLFADILAGIESVTSVHNYQTLIANYNYDRDSEEESVINLLSYNIDGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLDKRVRRKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPDLDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRMAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL
>NC_017631.1|WP_001128336.1|4926486_4927806_-|gnt-II-system-L-idonate-transporter
MPLIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGGLAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVLLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLPPHPGPTAIATIFEANLGTTLLYGFIITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAAVCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFKQVLVDSGVGQYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAITTAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVMETLISIMGLLGVLAINAVLH
>NC_017631.1|WP_000998695.1|4927870_4928635_-|gluconate-5-dehydrogenase
MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQAVAAPFNVTHKHEIDAAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGMLVAV
>NC_017631.1|WP_001197423.1|4928658_4929690_-|L-idonate-5-dehydrogenase
MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKVIHSDSSKLHEGQTVAINPSKPCGHCKYCIEHNENQCTEMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDHWKAEKGYFDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLKGSFRFTSEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF
>NC_017631.1|WP_000896740.1|4929906_4930470_+|gluconokinase
MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQDDEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGSASDQRCE
>NC_017631.1|WP_001528388.1|4930473_4931493_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQNKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12113-12164	10	0.808
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	272-323	10	0.808
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31252-31303	10	0.808
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4115-4166	11	0.788
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4114-4165	11	0.788
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4114-4165	11	0.788
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4114-4165	11	0.788
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	152-203	11	0.788
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208982-209033	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	44-95	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219476-219527	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	43-94	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	18332-18383	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210310-210361	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	43-94	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191265-191316	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	43-94	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7393-7444	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84217-84268	12	0.769
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3373-3424	13	0.75
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3372-3423	13	0.75
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15000-15051	13	0.75
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3372-3423	13	0.75
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3372-3423	13	0.75
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	70-121	14	0.731
NC_017631_3	3.1\|4919609\|52\|NC_017631\|CRISPRCasFinder	4919609-4919660	52	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30159-30210	14	0.731

1. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
tcggtgcctgatgcgacgctggcgcgtcttatcaggcctacgagtcgcccgt	Protospacer
 *  ***************** ***********************.   .*.

2. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaa-ccgttacc	Protospacer
 *  *************************************.*. .*. *.*

3. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc--	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacag--ccgttgcca	Protospacer
 *  *************************************..  .*. ***

4. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

5. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

6. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

7. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

8. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ttgaagcctgatgcgacgctgacgcgtcttatcaggcctacnagacccgagc	Protospacer
 .   **************** ******************* ** .* * **

9. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

10. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

11. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

12. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

13. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

14. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

15. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

16. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

17. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

18. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc---	CRISPR spacer
cggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaa---actgcact	Protospacer
    ***************** ************ ******.*.   * ***

19. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc---	CRISPR spacer
cggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaa---actgcact	Protospacer
    ***************** ************ ******.*.   * ***

20. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

21. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

22. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

23. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

24. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

25. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 14, identity: 0.731

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ccgatgcctgatgcgacgctgacgcgtcttatcatgcctacggacctgaacc	Protospacer
 *  ***************** ************ *******.......  *

26. spacer 3.1|4919609|52|NC_017631|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 14, identity: 0.731

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaatctgcaccc	Protospacer
 .  ***************** ************ ******.* .*  .. *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

357535 : 367222

Enterobacteria_phage(25.0%)

integrase

attL 348451:348467|attR 368451:368467

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
348451:348467	attL	NA	NA	NA	NA
WP_000749899.1\|357535_358591_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	3.5e-118	60.6
WP_001285288.1\|358879_359983_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000893307.1\|359994_361248_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.7e-95	47.0
WP_000772646.1\|361603_362818_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.2e-132	56.2
WP_000035054.1\|363245_363449_+	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	4.7e-08	50.9
WP_000412533.1\|363448_363880_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	1.8e-28	50.3
WP_001019363.1\|363892_364726_+	antA/AntB antirepressor family protein	G9L6G1	Escherichia_phage	5.3e-21	47.5
WP_000042976.1\|364718_364898_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000613398.1\|364894_365962_+	ash family protein	NA	NA	NA	NA
WP_001065661.1\|365954_366149_+	hypothetical protein	NA	NA	NA	NA
WP_001024679.1\|366145_366409_+	hypothetical protein	NA	NA	NA	NA
WP_000181940.1\|366405_366627_+	hypothetical protein	NA	NA	NA	NA
WP_001058743.1\|366619_367222_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	2.0e-25	36.3
368451:368467	attR	NA	NA	NA	NA

DBSCAN-SWA_2

371443 : 378685

Sodalis_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000420674.1\|371443_371905_+	DUF2824 family protein	Q2A0B3	Sodalis_phage	2.9e-61	72.2
WP_000909173.1\|371898_372552_+	hypothetical protein	Q2A0B2	Sodalis_phage	3.6e-49	67.3
WP_000246960.1\|372551_373973_+	phage DNA ejection protein	B6SCW4	Bacteriophage	2.8e-123	52.7
WP_001029844.1\|373972_376078_+	hypothetical protein	A0A2I7QQN9	Vibrio_phage	7.2e-91	37.1
WP_042025458.1\|376096_376486_-	hypothetical protein	NA	NA	NA	NA
WP_000098670.1\|377278_377716_-	hypothetical protein	A5LH78	Enterobacteria_phage	5.1e-15	37.3
WP_001528727.1\|377728_378685_-	hypothetical protein	A5LH79	Enterobacteria_phage	4.2e-62	42.5

DBSCAN-SWA_3

1158392 : 1237054

Escherichia_phage(40.98%)

protease,tail,head,terminase,transposase,lysis,integrase,holin,capsid

attL 1145853:1145868|attR 1171324:1171339

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1145853:1145868	attL	NA	NA	NA	NA
WP_000426105.1\|1158392_1159079_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_001528902.1\|1159178_1159637_-	hypothetical protein	NA	NA	NA	NA
WP_001167423.1\|1160094_1160607_+	hypothetical protein	NA	NA	NA	NA
WP_001443206.1\|1160848_1161418_+	hypothetical protein	NA	NA	NA	NA
WP_011076307.1\|1161692_1161977_-	S/F1C fimbrial major subunit operon transcriptional regulator	NA	NA	NA	NA
WP_000046975.1\|1162332_1162662_+	S/F1C fimbrial major subunit operon transcriptional regulator	NA	NA	NA	NA
WP_000768217.1\|1163033_1163576_+	F1C fimbrial major subunit FocA	NA	NA	NA	NA
WP_000703304.1\|1163646_1164186_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_000975445.1\|1164226_1164922_+	sfa/F1C fimbrial biogenesis chaperone	NA	NA	NA	NA
WP_000113674.1\|1166516_1167647_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21940	Phage_21	3.4e-103	51.4
WP_000113189.1\|1167624_1167873_-	excisionase	NA	NA	NA	NA
WP_000048416.1\|1167937_1170409_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.1e-58	58.2
WP_001090200.1\|1170501_1170693_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449191.1\|1170689_1170878_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_000102677.1\|1171440_1171701_+	hypothetical protein	NA	NA	NA	NA
1171324:1171339	attR	NA	NA	NA	NA
WP_000394526.1\|1171678_1171999_-	hypothetical protein	NA	NA	NA	NA
WP_001304608.1\|1172001_1172241_-	hypothetical protein	NA	NA	NA	NA
WP_000379612.1\|1172400_1172556_-	DUF1391 family protein	M4QQ57	Salicola_phage	6.8e-07	51.1
WP_000753626.1\|1172809_1173271_-	helix-turn-helix domain-containing protein	A0A0U2QW76	Escherichia_phage	7.6e-78	99.3
WP_001053425.1\|1173378_1173654_+	helix-turn-helix domain-containing protein	A0A0U2S629	Escherichia_phage	1.1e-39	97.6
WP_000702041.1\|1173637_1174063_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001262415.1\|1174134_1175175_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	1.0e-98	89.8
WP_001309414.1\|1175086_1175629_+	hypothetical protein	A0A0U2JGJ0	Escherichia_phage	3.6e-79	90.2
WP_000450708.1\|1175662_1176433_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.5e-86	68.0
WP_001141099.1\|1176448_1176841_+	DUF977 family protein	A0A088CBK9	Shigella_phage	1.5e-39	63.3
WP_001266130.1\|1176837_1177134_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.2e-47	95.8
WP_001209475.1\|1177130_1177592_+	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	2.6e-38	94.0
WP_000403780.1\|1177569_1177869_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	4.3e-50	100.0
WP_001224665.1\|1178021_1178204_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	9.1e-27	98.3
WP_000753053.1\|1178196_1178373_+	hypothetical protein	A0A2R2X2A8	Escherichia_phage	3.3e-26	93.1
WP_001289989.1\|1178369_1178729_+	hypothetical protein	A0A076GCN9	Escherichia_phage	1.7e-37	73.5
WP_000510387.1\|1178729_1178945_+	hypothetical protein	A0A222YWK2	Escherichia_phage	2.2e-35	94.4
WP_001142588.1\|1178946_1179165_+	DUF4014 family protein	A0A1I9LJM2	Stx_converting_phage	3.6e-30	93.1
WP_000224216.1\|1179166_1179430_+	hypothetical protein	A0A2P0P958	Salmonella_phage	3.9e-31	73.6
WP_000207997.1\|1179440_1179608_+	hypothetical protein	A0A192Y6F5	Salmonella_phage	2.1e-14	89.4
WP_000350274.1\|1179715_1179949_+	hypothetical protein	A0A2R2Z2X8	Escherichia_phage	2.8e-36	100.0
WP_000967408.1\|1180183_1180396_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.1e-26	94.3
WP_001004956.1\|1180561_1181212_+	hypothetical protein	NA	NA	NA	NA
WP_000401168.1\|1181192_1182296_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_000687431.1\|1182453_1182627_+	hypothetical protein	A0A0U2I1S4	Escherichia_phage	6.8e-16	68.5
WP_001403449.1\|1182686_1182959_+	hypothetical protein	I6PCV7	Cronobacter_phage	1.0e-10	47.5
WP_001265091.1\|1182960_1184007_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	4.5e-110	55.0
WP_000904114.1\|1184019_1184394_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.1e-34	62.7
WP_000762880.1\|1184390_1185212_+	antitermination protein	K7P7B9	Enterobacteria_phage	8.5e-80	60.1
WP_000917768.1\|1185438_1185636_+	hypothetical protein	S5MQK8	Escherichia_phage	6.1e-29	100.0
WP_000935524.1\|1185786_1186845_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	5.2e-207	98.9
WP_001304604.1\|1187308_1187740_+	tellurite resistance protein	H6WZJ6	Escherichia_phage	8.1e-66	95.1
WP_000216690.1\|1187736_1187901_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	2.6e-17	100.0
WP_000874510.1\|1188866_1190828_+	SASA family carbohydrate esterase	A0A0P0ZBH7	Stx2-converting_phage	3.3e-239	64.1
WP_001304601.1\|1190963_1191146_+	DUF1378 family protein	S5MBZ5	Escherichia_phage	4.6e-23	86.7
WP_001304600.1\|1191183_1191429_+	DUF826 domain-containing protein	S5MW40	Escherichia_phage	1.1e-14	87.7
WP_000284510.1\|1191505_1191721_+\|holin	class II holin family protein	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_000731250.1\|1191725_1192076_+	YdfR family protein	Q08JA0	Stx2-converting_phage	2.6e-54	92.1
WP_000992075.1\|1192139_1192673_+	lysozyme	Q6H9V6	Enterobacteria_phage	1.4e-99	94.9
WP_001082534.1\|1192971_1193466_+\|lysis	lysis protein	Q9ZXB6	Enterobacteria_phage	1.1e-74	90.7
WP_000736383.1\|1193462_1193687_+	hypothetical protein	NA	NA	NA	NA
WP_001304598.1\|1193885_1194086_-	YlcI/YnfO family protein	H6WZK6	Escherichia_phage	1.3e-29	97.0
WP_000829186.1\|1194127_1194493_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	1.7e-61	95.0
WP_000958372.1\|1194784_1195348_+\|terminase	terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	3.3e-83	92.5
WP_001304597.1\|1195344_1197006_+\|terminase	terminase large subunit	B6DZ98	Enterobacteria_phage	0.0e+00	98.6
WP_000173054.1\|1197070_1199008_+\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	97.8
WP_001063027.1\|1199052_1199274_+	hypothetical protein	H6WZL1	Escherichia_phage	9.9e-36	98.6
WP_000125984.1\|1201800_1202127_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
WP_001007909.1\|1202139_1202490_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	4.6e-59	99.1
WP_000573362.1\|1202486_1202933_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	99.3
WP_000133388.1\|1202929_1203274_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
WP_001275433.1\|1203339_1204053_+	immunoglobulin domain-containing protein	A0A0P0ZDV1	Stx2-converting_phage	2.3e-126	99.6
WP_000710952.1\|1204070_1204445_+\|tail	phage tail assembly chaperone	A0A0P0ZE84	Stx2-converting_phage	4.6e-65	100.0
WP_001538679.1\|1204540_1204750_+	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	2.0e-33	98.6
WP_000212987.1\|1204797_1208040_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	89.0
WP_000807940.1\|1208032_1208374_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	4.7e-61	97.3
WP_001304593.1\|1208373_1209072_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	1.1e-128	96.6
WP_000194709.1\|1209082_1209826_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	8.6e-148	98.0
WP_071781460.1\|1209771_1210404_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	9.3e-103	98.1
WP_000514743.1\|1210742_1214435_+	DUF1983 domain-containing protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	85.4
WP_001228259.1\|1214502_1215102_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	5.2e-103	92.5
WP_001304591.1\|1215253_1217317_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A1X7QGG5	Escherichia_phage	4.3e-149	63.0
WP_001204581.1\|1217313_1217592_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	6.0e-22	50.5
WP_000355614.1\|1217601_1217898_+	hypothetical protein	NA	NA	NA	NA
WP_001304590.1\|1218015_1218348_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_001304589.1\|1218533_1218986_+	VapA/VapB family virulence-associated protein	NA	NA	NA	NA
WP_000237767.1\|1220722_1221250_+	S/F1C fimbrial adhesin minor pilin SfaG/FocF	NA	NA	NA	NA
WP_000767894.1\|1221271_1221775_+	F1C fimbria minor subunit FocG	NA	NA	NA	NA
WP_001304588.1\|1221725_1222736_+	F1C fimbrial protein subunit FocH	NA	NA	NA	NA
WP_000012016.1\|1223039_1223780_+	transcriptional regulator SfaY	NA	NA	NA	NA
WP_001445604.1\|1223926_1224478_+	HTH-type transcriptional regulator PapX	NA	NA	NA	NA
WP_000950586.1\|1224803_1225841_-\|transposase	IS630-like element ISEc40 family transposase	NA	NA	NA	NA
WP_001222181.1\|1226070_1228248_+	siderophore salmochelin receptor IroN	NA	NA	NA	NA
WP_000271272.1\|1228292_1229249_-	catecholate siderophore esterase IroE	NA	NA	NA	NA
WP_000933673.1\|1229333_1230563_-	catecholate siderophore esterase IroD	NA	NA	NA	NA
WP_001111200.1\|1230666_1234326_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.6e-45	29.8
WP_001221122.1\|1234465_1235581_-	glycosyltransferase	NA	NA	NA	NA
WP_000805228.1\|1236118_1236418_+	hypothetical protein	NA	NA	NA	NA
WP_000526115.1\|1236595_1237054_+\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	5.5e-12	31.5

DBSCAN-SWA_4

1359644 : 1407359

Enterobacteria_phage(52.38%)

protease,tail,head,terminase,portal,integrase,lysis,tRNA,capsid

attL 1349903:1349916|attR 1369443:1369456

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1349903:1349916	attL	NA	NA	NA	NA
WP_001443105.1\|1359644_1360751_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476093.1\|1360804_1361266_-	phosphatase NudJ	NA	NA	NA	NA
WP_001248695.1\|1361275_1361929_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000444487.1\|1362100_1363351_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
WP_000741334.1\|1363464_1364607_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z02	Phage_21	1.1e-205	99.7
WP_000088653.1\|1364596_1364833_-	excisionase	NA	NA	NA	NA
WP_000490215.1\|1364972_1365212_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	8.8e-38	93.7
WP_001304460.1\|1365237_1365522_-	ASCH domain-containing protein	A0A2D1GLL3	Escherichia_phage	4.0e-45	89.4
WP_000208010.1\|1365514_1366255_-	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	6.5e-47	67.1
WP_000951713.1\|1366251_1366461_-	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.3e-32	91.2
WP_001327280.1\|1366462_1366996_-	hypothetical protein	Q1MVF7	Enterobacteria_phage	2.5e-64	82.1
WP_001518554.1\|1367013_1367268_-	hypothetical protein	A5LH60	Enterobacteria_phage	1.7e-34	91.1
WP_001289890.1\|1367269_1368034_-	ead/Ea22-like family protein	K7PKG8	Enterobacteria_phage	3.6e-56	94.8
WP_000763378.1\|1368030_1368252_-	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	8.4e-35	97.3
WP_000188870.1\|1368350_1368566_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.0e-32	100.0
WP_000548537.1\|1368642_1368834_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	2.1e-26	98.4
WP_000149544.1\|1368806_1368989_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	6.9e-27	96.7
WP_000186790.1\|1368985_1369666_-	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	5.1e-131	99.1
1369443:1369456	attR	NA	NA	NA	NA
WP_000100847.1\|1369662_1370448_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995434.1\|1370453_1370750_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.1e-48	98.0
WP_000372923.1\|1370825_1370969_-	host cell division inhibitory peptide Kil	A0A0N7C2U2	Escherichia_phage	2.7e-18	97.9
WP_001198860.1\|1370937_1371102_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	A0A0N6WES3	Escherichia_phage	1.4e-26	100.0
WP_000065374.1\|1371174_1371543_-	DUF2528 family protein	M1FPD2	Enterobacteria_phage	2.0e-65	100.0
WP_000213979.1\|1371725_1371926_-	antirestriction Ral family protein	A0A0K2FJE6	Enterobacteria_phage	7.1e-33	98.5
WP_001066176.1\|1372139_1372721_+	superinfection exclusion B family protein	K7P6T7	Enterobacteria_phage	5.2e-92	92.2
WP_000088199.1\|1372737_1373010_-	hypothetical protein	A0A0N7C217	Escherichia_phage	2.8e-40	98.9
WP_000438342.1\|1372987_1373170_-	hypothetical protein	A0A0N7C057	Escherichia_phage	1.1e-27	98.3
WP_000968518.1\|1373446_1374199_-	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_001062368.1\|1374195_1374753_-	hypothetical protein	NA	NA	NA	NA
WP_001302016.1\|1374792_1375488_-	LexA family transcriptional regulator	A0A0N7BTS4	Escherichia_phage	8.6e-134	100.0
WP_000067727.1\|1375563_1375779_+	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	2.2e-35	100.0
WP_000442609.1\|1375920_1376217_+	hypothetical protein	G9L678	Escherichia_phage	2.2e-46	94.9
WP_000185431.1\|1376249_1377149_+	replication protein	K7P7F0	Enterobacteria_phage	3.5e-172	99.0
WP_000788872.1\|1377145_1377847_+	Replication protein 14	A0A0P0ZD31	Stx2-converting_phage	2.9e-129	99.6
WP_000145927.1\|1377843_1378134_+	protein ren	O48423	Enterobacteria_phage	2.8e-46	97.9
WP_000736913.1\|1378207_1378648_+	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.2e-80	100.0
WP_000153286.1\|1378644_1379172_+	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	4.7e-100	99.4
WP_001254243.1\|1379168_1379345_+	NinE family protein	A5VW90	Enterobacteria_phage	3.3e-26	96.6
WP_000386643.1\|1379347_1379689_+	DUF2591 family protein	Q76H72	Enterobacteria_phage	1.6e-61	96.5
WP_001099712.1\|1379895_1380258_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	4.3e-60	96.5
WP_000971053.1\|1380254_1380395_+	YlcG family protein	K7PHH3	Enterobacteria_phage	3.6e-07	67.4
WP_001204776.1\|1380480_1380864_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	1.5e-55	83.3
WP_000737271.1\|1381052_1382135_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.6e-166	80.1
WP_000839596.1\|1382723_1382939_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001135277.1\|1382938_1383436_+	lysozyme RrrD	M1FJA0	Enterobacteria_phage	5.4e-90	97.0
WP_001228695.1\|1383652_1383835_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_001298464.1\|1383925_1384219_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	7.0e-45	92.8
WP_000830178.1\|1384699_1385026_+	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_000881610.1\|1385232_1385415_+	hypothetical protein	NA	NA	NA	NA
WP_000867568.1\|1385977_1386526_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
WP_001304453.1\|1386497_1388426_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	3.3e-260	66.7
WP_000258997.1\|1388409_1388616_+\|head	phage head-stabilizing protein	K7PM10	Enterobacteria_phage	3.0e-10	55.4
WP_000831761.1\|1388612_1390205_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	4.2e-184	60.9
WP_001253913.1\|1390194_1391700_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.6e-100	53.7
WP_000256840.1\|1391736_1392084_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.0e-22	58.1
WP_000522648.1\|1392141_1393170_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	5.9e-115	61.6
WP_000201530.1\|1393221_1393596_+	hypothetical protein	NA	NA	NA	NA
WP_001204540.1\|1393588_1393942_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	3.4e-38	65.0
WP_000975062.1\|1393953_1394532_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.9e-79	99.0
WP_000683101.1\|1394528_1394924_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	5.5e-69	97.7
WP_001351266.1\|1394931_1395672_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	3.7e-127	95.9
WP_000479129.1\|1395687_1396110_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.7e-66	91.4
WP_000459474.1\|1396091_1396526_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	9.0e-57	90.0
WP_000840269.1\|1396518_1399080_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	94.5
WP_000847405.1\|1399076_1399406_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	5.4e-54	94.5
WP_001152660.1\|1399405_1400104_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.0e-131	97.8
WP_000140699.1\|1400109_1400853_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.1e-147	97.2
WP_000090917.1\|1400789_1401422_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.9e-97	100.0
WP_000515327.1\|1401482_1404965_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	89.5
WP_000290543.1\|1405023_1407084_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0E3M194	Enterobacteria_phage	2.0e-125	53.4
WP_000654167.1\|1407080_1407359_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	7.6e-25	56.5

DBSCAN-SWA_5

1793566 : 1876369

Burkholderia_virus(40.0%)

protease,tail,plate,transposase,integrase,tRNA,holin,capsid

attL 1801596:1801610|attR 1826527:1826541

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001260849.1\|1793566_1794388_+\|protease	serine protease	NA	NA	NA	NA
WP_000046657.1\|1794426_1794756_-	multidrug/spermidine efflux SMR transporter subunit MdtI	NA	NA	NA	NA
WP_000276156.1\|1794742_1795108_-	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA
WP_001118215.1\|1795519_1796554_+	AI-2 transporter TqsA	NA	NA	NA	NA
WP_000014036.1\|1796578_1797967_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA	NA	NA	NA
WP_001298661.1\|1797977_1799510_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_000769126.1\|1800033_1800978_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000412379.1\|1801163_1802546_+	amino acid permease	NA	NA	NA	NA
1801596:1801610	attL	NA	NA	NA	NA
WP_000520812.1\|1802582_1803305_+	dihydromonapterin reductase	NA	NA	NA	NA
WP_000524861.1\|1803301_1803637_-	GlpM family protein	NA	NA	NA	NA
WP_001298660.1\|1803765_1804485_+	two-component system response regulator RstA	NA	NA	NA	NA
WP_001571575.1\|1804769_1804931_+	hypothetical protein	NA	NA	NA	NA
WP_000460689.1\|1804934_1805567_-	hypothetical protein	NA	NA	NA	NA
WP_001281696.1\|1805681_1806080_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	3.9e-30	55.9
WP_001573929.1\|1806051_1806501_-	regulatory protein GemA	A4JWM5	Burkholderia_virus	1.6e-24	46.6
WP_000123379.1\|1806493_1806709_-	hypothetical protein	NA	NA	NA	NA
WP_000631814.1\|1806698_1806929_-	hypothetical protein	NA	NA	NA	NA
WP_000131939.1\|1806925_1807609_-	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	4.5e-34	36.9
WP_000197789.1\|1807605_1807911_-	hypothetical protein	NA	NA	NA	NA
WP_000632579.1\|1807920_1808193_-	hypothetical protein	NA	NA	NA	NA
WP_001140139.1\|1808480_1809011_-	host-nuclease inhibitor Gam family protein	L7P7T1	Pseudomonas_phage	9.0e-59	66.7
WP_000843445.1\|1809038_1809308_-	hypothetical protein	NA	NA	NA	NA
WP_000960678.1\|1809310_1810477_-	AAA family ATPase	A4JWN1	Burkholderia_virus	4.4e-122	59.9
WP_000990530.1\|1810487_1812257_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	1.4e-228	68.3
WP_000533819.1\|1812260_1813172_-	hypothetical protein	A4JWN3	Burkholderia_virus	2.0e-74	55.3
WP_000047758.1\|1813182_1813491_-	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	3.5e-23	55.9
WP_000123378.1\|1813543_1813732_-	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	3.9e-17	71.0
WP_000579778.1\|1813832_1814171_+	helix-turn-helix domain-containing protein	F6MII3	Haemophilus_phage	4.8e-05	34.4
WP_000783855.1\|1814287_1815052_-	DNA adenine methylase	A2I2Y7	Vibrio_virus	5.2e-100	64.4
WP_001069609.1\|1815241_1815457_-	hypothetical protein	NA	NA	NA	NA
WP_001573938.1\|1815458_1815860_+	hypothetical protein	NA	NA	NA	NA
WP_000194949.1\|1815835_1816579_-	hypothetical protein	NA	NA	NA	NA
WP_000793145.1\|1816709_1817060_+\|holin	putative holin	A4JWP3	Burkholderia_virus	9.0e-23	53.9
WP_001104438.1\|1817062_1817800_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.9e-63	59.5
WP_001299256.1\|1817828_1818440_+	hypothetical protein	A0A0S4L1H0	Pseudomonas_phage	6.9e-10	34.2
WP_000175097.1\|1818436_1818763_+	membrane protein	Q6QIC4	Burkholderia_phage	9.6e-19	49.5
WP_000227704.1\|1818762_1819074_+	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	4.0e-30	60.6
WP_000533684.1\|1819076_1819619_+	DUF3486 family protein	A4JWJ3	Burkholderia_virus	4.9e-44	53.3
WP_000137893.1\|1819615_1821139_+	hypothetical protein	A4JWJ4	Burkholderia_virus	1.8e-184	62.5
WP_000090679.1\|1821138_1822635_+	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	8.0e-169	59.6
WP_000117560.1\|1822615_1823437_+\|capsid	minor capsid protein	A4JWJ6	Burkholderia_virus	1.2e-97	61.2
WP_000135513.1\|1823439_1823898_+	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	1.5e-30	44.8
WP_001273074.1\|1824112_1825228_+	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
WP_001286913.1\|1825242_1826196_+	hypothetical protein	A4JWK0	Burkholderia_virus	1.3e-63	43.5
WP_000537457.1\|1826205_1826544_+	DUF2190 family protein	NA	NA	NA	NA
1826527:1826541	attR	NA	NA	NA	NA
WP_000271668.1\|1826545_1826992_+	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	2.2e-34	52.3
WP_001101802.1\|1826991_1827456_+	Gp37 family protein	Q6QIB2	Burkholderia_phage	9.1e-39	51.0
WP_000666496.1\|1827455_1827707_+	hypothetical protein	NA	NA	NA	NA
WP_000729833.1\|1827696_1829124_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A4JWK5	Burkholderia_virus	2.7e-214	76.5
WP_162832341.1\|1829120_1829645_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.1e-67	66.7
WP_000110114.1\|1829647_1829929_+	hypothetical protein	NA	NA	NA	NA
WP_000084213.1\|1830026_1830362_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001202894.1\|1830285_1830444_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_000458384.1\|1833733_1834618_+\|tail	phage tail protein	A4JWL1	Burkholderia_virus	6.8e-51	47.9
WP_000478221.1\|1834617_1834830_+\|tail	tail protein X	Q6QIA3	Burkholderia_phage	2.4e-18	60.0
WP_000807995.1\|1834817_1835972_+	phage late control D family protein	Q6QIA2	Burkholderia_phage	2.5e-85	47.6
WP_000148265.1\|1835968_1836565_+\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	5.4e-36	45.2
WP_000859111.1\|1836619_1836967_+	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	5.9e-35	62.4
WP_001219102.1\|1836957_1838061_+\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	8.3e-107	55.2
WP_000138756.1\|1838053_1838632_+\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	1.7e-66	66.8
WP_000527463.1\|1838634_1840470_+\|tail	tail fiber protein	A0A0K2FIZ6	Escherichia_phage	4.6e-41	45.2
WP_000072167.1\|1840469_1841084_+\|tail	tail fiber assembly protein	Q9MCR5	Enterobacteria_phage	1.7e-61	61.5
WP_014639621.1\|1841090_1841552_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	3.9e-34	50.0
WP_000904922.1\|1841623_1842196_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.6e-85	85.2
WP_001327661.1\|1843572_1844502_+	DNA replication terminus site-binding protein	NA	NA	NA	NA
WP_001099099.1\|1844498_1845902_-	class II fumarate hydratase	NA	NA	NA	NA
WP_000066639.1\|1846044_1847691_-	class I fumarate hydratase	NA	NA	NA	NA
WP_001170643.1\|1847889_1849065_+	mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_001043378.1\|1849165_1850674_+	YdgA family protein	NA	NA	NA	NA
WP_001227049.1\|1850718_1851984_-	glucuronide uptake porin UidC	NA	NA	NA	NA
WP_001075887.1\|1852022_1853396_-	glucuronide transporter	NA	NA	NA	NA
WP_000945903.1\|1853392_1855204_-	beta-glucuronidase	B9U1V4	Vaccinia_virus	0.0e+00	99.5
WP_000969092.1\|1855593_1856184_-	DNA-binding transcriptional regulator UidR	NA	NA	NA	NA
WP_000483379.1\|1856412_1857180_-	7-alpha-hydroxysteroid dehydrogenase	NA	NA	NA	NA
WP_000179501.1\|1857291_1858320_-	mal regulon transcriptional regulator MalI	NA	NA	NA	NA
WP_000125604.1\|1858494_1860087_+	PTS maltose transporter subunit IICB	NA	NA	NA	NA
WP_000459361.1\|1860096_1861269_+	bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY	NA	NA	NA	NA
WP_000567511.1\|1861372_1862374_+	adenosine deaminase	NA	NA	NA	NA
WP_001282503.1\|1862409_1863450_-	oxidoreductase	NA	NA	NA	NA
WP_001296096.1\|1863692_1863818_+	division septum protein Blr	NA	NA	NA	NA
WP_000217950.1\|1864090_1864306_+	transcription modulator YdgT	NA	NA	NA	NA
WP_000214176.1\|1864391_1864832_+	DUF2569 domain-containing protein	NA	NA	NA	NA
WP_000133193.1\|1864908_1865490_+	electron transport complex subunit RsxA	NA	NA	NA	NA
WP_000991093.1\|1865489_1866068_+	electron transport complex subunit RsxB	NA	NA	NA	NA
WP_000915828.1\|1866060_1868289_+	electron transport complex subunit RsxC	NA	NA	NA	NA
WP_000231933.1\|1868289_1869348_+	electron transport complex subunit RsxD	NA	NA	NA	NA
WP_000920791.1\|1869351_1869972_+	electron transport complex subunit RsxG	NA	NA	NA	NA
WP_001289647.1\|1869975_1870671_+	electron transport complex subunit RsxE	NA	NA	NA	NA
WP_001030339.1\|1870670_1871306_+	endonuclease III	NA	NA	NA	NA
WP_000100937.1\|1871915_1873418_+	dipeptide/tripeptide permease DtpA	NA	NA	NA	NA
WP_000765756.1\|1873523_1874129_+	glutathione transferase GstA	NA	NA	NA	NA
WP_001443142.1\|1874172_1875033_-	pyridoxal kinase PdxY	NA	NA	NA	NA
WP_001339629.1\|1875094_1876369_-\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	8.8e-84	41.4

DBSCAN-SWA_6

2373354 : 2379654

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001100810.1\|2373354_2373897_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.4e-51	62.5
WP_000857504.1\|2373899_2374778_-	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	3.3e-106	63.8
WP_001023634.1\|2374835_2375735_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	7.4e-29	34.5
WP_000699384.1\|2375734_2376820_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.7e-100	53.1
WP_000183060.1\|2377191_2378085_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.0e-46	42.0
WP_001116056.1\|2378259_2379654_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.7e-19	31.9

DBSCAN-SWA_7

2716478 : 2729435

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000368121.1\|2716478_2717411_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	4.6e-167	99.0
WP_001305200.1\|2717998_2718517_-	hypothetical protein	A0A2L1IV11	Escherichia_phage	1.9e-85	100.0
WP_001529349.1\|2718576_2726526_-	phase-variable autotransporter adhesin UpaE	A0A2L1IV38	Escherichia_phage	0.0e+00	99.3
WP_000243057.1\|2726550_2727171_-	LuxR family transcriptional regulator	A0A2L1IV08	Escherichia_phage	5.0e-117	98.5
WP_001181152.1\|2727488_2728118_-	tyrosine-type DNA invertase IpuA	A0A2L1IV36	Escherichia_phage	1.6e-118	99.0
WP_001224626.1\|2728865_2729435_+	tyrosine-type DNA invertase IpuB	A0A2L1IV36	Escherichia_phage	7.0e-49	52.2

DBSCAN-SWA_8

3060315 : 3067455

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000103863.1\|3060315_3062877_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
WP_001141289.1\|3062982_3063639_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	2.8e-49	45.2
WP_001298167.1\|3063689_3064457_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.2e-69	57.4
WP_000847998.1\|3064652_3065561_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.1e-118	76.9
WP_000590418.1\|3065557_3066820_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_001279001.1\|3066816_3067455_+	aldolase	A0A077SK32	Escherichia_phage	2.8e-83	75.0

DBSCAN-SWA_9

3297620 : 3355874

Staphylococcus_phage(25.0%)

protease,transposase,lysis,integrase,tRNA

attL 3298490:3298507|attR 3357019:3357036

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001298254.1\|3297620_3298379_+\|protease	metalloprotease LoiP	NA	NA	NA	NA
WP_000105562.1\|3298469_3299390_-	agmatinase	NA	NA	NA	NA
3298490:3298507	attL	NA	NA	NA	NA
WP_000758891.1\|3299525_3300257_-	hypothetical protein	NA	NA	NA	NA
WP_001295380.1\|3300402_3302379_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA
WP_001297406.1\|3302387_3302519_-	acid stress response protein YqgB	NA	NA	NA	NA
WP_001331575.1\|3302654_3302870_+	hypothetical protein	NA	NA	NA	NA
WP_001062128.1\|3303173_3304328_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
WP_001305311.1\|3304764_3306159_+	galactose/proton symporter	NA	NA	NA	NA
WP_000858396.1\|3306235_3306733_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_001305312.1\|3306827_3307535_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001222509.1\|3307614_3308346_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593255.1\|3308358_3309309_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|3309417_3309981_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017107.1\|3309980_3310397_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001305314.1\|3310570_3311551_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997805.1\|3311568_3312273_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094838.1\|3312290_3312857_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277222.1\|3312853_3313144_+	YggU family protein	NA	NA	NA	NA
WP_001174738.1\|3313151_3313745_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239983.1\|3313737_3314874_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_000745234.1\|3314938_3315946_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394107.1\|3316062_3317109_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|3317284_3318004_-	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_001107567.1\|3318187_3318514_-	YggL family protein	NA	NA	NA	NA
WP_000786915.1\|3318513_3319233_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001305316.1\|3319393_3320446_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091700.1\|3320473_3320749_+	oxidative damage protection protein	NA	NA	NA	NA
WP_024175103.1\|3320813_3321893_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001296363.1\|3322094_3323351_+	nucleoside permease NupG	NA	NA	NA	NA
WP_001305317.1\|3323399_3325535_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234526.1\|3325927_3326635_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218869.1\|3327013_3328279_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.1e-77	38.1
WP_000147017.1\|3328534_3329578_+	hypothetical protein	NA	NA	NA	NA
WP_001774069.1\|3331271_3331823_-	HTH-type transcriptional regulator PapX	NA	NA	NA	NA
WP_000006213.1\|3334314_3334548_+	major pilus subunit operon transcriptional regulator PapI	NA	NA	NA	NA
WP_001513409.1\|3336415_3336529_-\|lysis	lysis protein	NA	NA	NA	NA
WP_001110186.1\|3338362_3338623_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000109147.1\|3338664_3339225_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001296373.1\|3339264_3339693_+	DUF417 family protein	NA	NA	NA	NA
WP_103103190.1\|3340401_3341629_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.2e-170	95.3
WP_000074472.1\|3341742_3342936_-	MFS transporter	NA	NA	NA	NA
WP_001296374.1\|3343071_3344796_+	aerobactin synthase IucA	NA	NA	NA	NA
WP_001287500.1\|3344796_3345744_+	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001015715.1\|3345743_3347486_+	aerobactin synthase IucC	NA	NA	NA	NA
WP_000750130.1\|3347482_3348760_+	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_000973516.1\|3348841_3351043_+	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_011076574.1\|3351593_3351737_-	hypothetical protein	NA	NA	NA	NA
WP_001034083.1\|3351986_3355874_+\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	1.2e-227	39.0
3357019:3357036	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_017631

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection