CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_014538	Thermoanaerobacter sp. X513, complete sequence	5 crisprs	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	0	21	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_014538_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014538_1

878513-878711

Orphan

Consensus_repeat	Method
ATAGCTCAGTTGGTAGAGCAACACCCTGCCAAGCTG	PILER-CR

2 spacers

csa3

The CRISPR arrays of NC_014538_1

>merge|NC_014538|1|878513-878711|PILER-CR
ATAGCTCAGTTGGTTAGAGCGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCAAGTCCCTTTTGGGTCGCCAGTTATGCCTCGATAGCTCAGTAGGTAGAGCAAGGGACTGAAAATCCCTGTGTCAGTGGTTCGATTCCACTTCGAGGCACCATTTGTGCGGACATAGCTCAGTTGGTAGAGCATCACCTTGCCAAGGTG

>NC_014538|1|1|878513-878711|PILER-CR
ATAGCTCAGTTGGTTAGAGCGCCAGCCTGTCACGCTG	GAGGTCGAGGGTTCAAGTCCCTTTTGGGTCGCCAGTTATGCCTCG
ATAGCTCAGTAGGTAGAGCAAGGGACTGAAAATCCCT	GTGTCAGTGGTTCGATTCCACTTCGAGGCACCATTTGTGCGGACATAGCTCAGTTGGTAG
AGCATCACCTTGCCAAGGTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_014538.1\|WP_003867223.1\|873818_874592_+\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|234599
NC_014538.1\|WP_003867230.1\|878935_879271_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NC_014538.1\|WP_009052584.1\|879393_880326_+\|response-regulator	unknown	unknown	gnl\|CDD\|226229
NC_014538.1\|WP_003867233.1\|881174_882053_+\|putative-sporulation-protein-YtxC	unknown	unknown	gnl\|CDD\|378056
NC_014538.1\|WP_003867234.1\|882137_882737_+\|DUF445-family-protein	unknown	unknown	gnl\|CDD\|226834
NC_014538.1\|WP_157748019.1\|875653_875797_+\|transposase	unknown	unknown	gnl\|CDD\|284650
NC_014538.1\|WP_003867225.1\|875326_875548_+\|NifU-family-protein	unknown	unknown	gnl\|CDD\|376458
NC_014538.1\|WP_003867226.1\|876137_876308_+\|small,-acid-soluble-spore-protein,-alpha/beta-type	unknown	unknown	unknown
NC_014538.1\|WP_009052585.1\|877419_878304_+\|Hsp33-family-molecular-chaperone-HslO	unknown	unknown	gnl\|CDD\|234643
NC_014538.1\|WP_003867222.1\|871851_873246_+\|dipeptidase-PepV	unknown	unknown	gnl\|CDD\|235988
NC_014538.1\|WP_009052582.1\|885041_886283_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NC_014538.1\|WP_003867239.1\|888186_888384_+\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
NC_014538.1\|WP_009052587.1\|876333_877080_+\|NAD-dependent-protein-deacylase	unknown	unknown	gnl\|CDD\|238704
NC_014538.1\|WP_012268764.1\|883034_884939_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NC_014538.1\|WP_013150518.1\|887607_888159_+\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
NC_014538.1\|WP_009052238.1\|871187_871511_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NC_014538.1\|WP_003867232.1\|880384_881119_+\|hypothetical-protein	unknown	unknown	unknown
NC_014538.1\|WP_009052586.1\|877155_877359_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NC_014538.1\|WP_009052581.1\|886294_887347_+\|chorismate-synthase	unknown	unknown	gnl\|CDD\|235438
NC_014538.1\|WP_009052588.1\|874808_875273_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|224867

Protein	Function_ID	Function_description	E-value
NC_014538.1\|WP_003867223.1\|873818_874592_+\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|234599	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed.	1.73564e-64
NC_014538.1\|WP_003867230.1\|878935_879271_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	2.13991e-19
NC_014538.1\|WP_009052586.1\|877155_877359_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	7.57026e-32
NC_014538.1\|WP_003867233.1\|881174_882053_+\|putative-sporulation-protein-YtxC	gnl\|CDD\|378056	pfam08812, YtxC, YtxC-like family. This family includes proteins similar to B. subtilis YtxC an uncharacterized protein.	1.06863e-72
NC_014538.1\|WP_003867234.1\|882137_882737_+\|DUF445-family-protein	gnl\|CDD\|226834	COG4399, COG4399, Uncharacterized protein conserved in bacteria [Function unknown].	8.15826e-19
NC_014538.1\|WP_157748019.1\|875653_875797_+\|transposase	gnl\|CDD\|284650	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain. This putative domain is found at the C-terminus of a large number of transposase proteins. This domain contains four conserved cysteines suggestive of a zinc binding domain. Given the need for transposases to bind DNA as well as the large number of DNA-binding zinc fingers we hypothesize this domain is DNA-binding.	1.95313e-05
NC_014538.1\|WP_003867225.1\|875326_875548_+\|NifU-family-protein	gnl\|CDD\|376458	pfam01106, NifU, NifU-like domain. This is an alignment of the carboxy-terminal domain. This is the only common region between the NifU protein from nitrogen-fixing bacteria and rhodobacterial species. The biochemical function of NifU is unknown.	1.63171e-29
NC_014538.1\|WP_009052585.1\|877419_878304_+\|Hsp33-family-molecular-chaperone-HslO	gnl\|CDD\|234643	PRK00114, hslO, Hsp33 family molecular chaperone HslO.	9.02406e-140
NC_014538.1\|WP_003867222.1\|871851_873246_+\|dipeptidase-PepV	gnl\|CDD\|235988	PRK07318, PRK07318, dipeptidase PepV; Reviewed.	0
NC_014538.1\|WP_009052582.1\|885041_886283_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.15014e-12
NC_014538.1\|WP_003867239.1\|888186_888384_+\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	1.35953e-21
NC_014538.1\|WP_009052587.1\|876333_877080_+\|NAD-dependent-protein-deacylase	gnl\|CDD\|238704	cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The Sir2 homolog from the archaea Sulfolobus solftaricus deacetylates the non-specific DNA protein Alba to mediate transcription repression.	4.41582e-116
NC_014538.1\|WP_012268764.1\|883034_884939_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NC_014538.1\|WP_013150518.1\|887607_888159_+\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	8.72964e-90
NC_014538.1\|WP_009052238.1\|871187_871511_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.45027e-20
NC_014538.1\|WP_009052584.1\|879393_880326_+\|response-regulator	gnl\|CDD\|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	7.43666e-43
NC_014538.1\|WP_009052581.1\|886294_887347_+\|chorismate-synthase	gnl\|CDD\|235438	PRK05382, PRK05382, chorismate synthase; Validated.	1.16637e-178
NC_014538.1\|WP_009052588.1\|874808_875273_+\|GAF-domain-containing-protein	gnl\|CDD\|224867	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms].	1.10624e-49

>NC_014538.1|WP_009052585.1|877419_878304_+|Hsp33-family-molecular-chaperone-HslO
MRDYIVRATAYNNKILAIAAFSTQTAQKAKEIHNLTPTTCAALGRALTAVAMMRVMMKGEKDKVTLVIKGDGPIGNIVVVSNYPGIVKGYVGNPTVDLPLSEKGKLDVGKAVGKNGYVTVIKDIGLKEPYVGTVELQTGEIGEDIAYYFYTSEQVPSAVGVGVLVGKEGNVLASGGFIIQLLPNIEEEVVAKVEEALKNISSVTELLRKGYLPEDILNHILGEMGLNILERVDLKYECDCSQERFETAIIALGKEEIKKLIAEGQSVEAVCHFCGKKYLIEESRLKELLRIAEE
>NC_014538.1|WP_009052586.1|877155_877359_+|cold-shock-protein
MVRGKVKWFNAEKGYGFIEREDGTDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQASKVRKVN
>NC_014538.1|WP_009052587.1|876333_877080_+|NAD-dependent-protein-deacylase
MGDKNLFEKAARLIKQSRKTIVLTGAGISTESGIPDFRSPGRGLWENLDPMEVLSTGVLYNFPEEFYKVGFKILSSMRNAEPNEAHYILSEMEKEGIIFGVITQNIDNLHQKAGSKNVFEVHGNTREGSCLRCGKKVSFEVLEEKVSKKQIPPRCDDCNGVLRPDVVLFGDPMPYAFDLAVKEVKSSDLLIVIGSSLAVSPVNFLPDTVRHLIIINATETPYDYKADVVIREKASYALRNIWDIIKFQ
>NC_014538.1|WP_003867226.1|876137_876308_+|small,-acid-soluble-spore-protein,-alpha/beta-type
MDNEILKLEAAEELGLLEKVKKVGWSKLSAQETGKIGSIVKKKMKLQQEVGKKEKL
>NC_014538.1|WP_157748019.1|875653_875797_+|transposase
MYVCQNCGIVVNGDVNGAVNILRRVSPNLKKDRGRGFLDNPVRIKVS
>NC_014538.1|WP_003867225.1|875326_875548_+|NifU-family-protein
MRERVEEVLELLRPSLQADGGDVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIKEEIPEVKEVIAV
>NC_014538.1|WP_009052588.1|874808_875273_+|GAF-domain-containing-protein
MEKRKVFDDLLVRIDQKAREIDDMDEFYGEVVKILADNVPYYNWTGFYFMKDGELVIGPYIGRPTEHVRIKVGQGVCGRAVAEKNTIIVDDVTKEDNYLACSLETKSEIVVPIWANGDIIGEIDIDSDDLAAFDEEDKRFLEKVAEIISRKLKK
>NC_014538.1|WP_003867223.1|873818_874592_+|prolipoprotein-diacylglyceryl-transferase
MYIPTISPYAFKIGPIDVHWYGIFMAISIAIGGYYLYRQAMKLNYDEDFLLNLLMIVVISGVVGARLMFVLANYPEWFIKDPVQVLKIYEGGLSWHGAVLGGFLAGLYYCRKKGVRINPLEDFAVLGLSIGNILVRIGNIFNQEVLGRPTEFAFGRWPAQLVGVAMGIILLIRYFYIQKKHMPDGYQFWSFIFYYQLMRGLIEETVRDNPLIWPVYLNEKWGIGFFTLTQLVTPFILILAYWMIRRVLNDPNKQFYN
>NC_014538.1|WP_003867222.1|871851_873246_+|dipeptidase-PepV
MDLNSYIDNMRDDIIKSVQELVRIKSVQDEPKPGMPYGEGIAKALDKALEIAQSLGLKTKNVDGYVGYAEYGEGEEMIGVLGHLDVVPEGDGWTYPPYGAEIHDGKIYGRGTVDDKGPIIAALYGLKAIKDAGLELSRRVRILFGTNEETGSHEIPYYLKHDEAPTMGFTPDAQYPIIYAEKGITMFNVVKDFNKKPSNIVIKYIKGGERPNVVPGFCEAGLKVKEANKKKEIQDKLEAFVKETGYNLKAEEKDEMLVIKSVGVSAHGSLPHLGKNAIMQLFLFLDRIDLEDSDVKDFIHFFATNIGIETNGKTFGIYLKDETGELTFNVGTIQLDESKGVLGLNIRYPVKYKYEDWMNIFENKIKTNGMRIEDMLHQPPLYFPPAHPLIKTLSKVYEEQTGQKAELLAIGGGTYAKEMPNTVAFGPVFPGKPELAHQADEYIEIEDLILNAKIYAHAIYELAK
>NC_014538.1|WP_009052238.1|871187_871511_-|winged-helix-turn-helix-transcriptional-regulator
MAENIYELRAEFFKALSHPTRLKILDVILNEKEICVCEIVNKIGVDQSTISKHLNILKKAGILESKKEGLSVFYKVRFPCMKDYFICIDKTIKCDLVTKVSFIDSSK
>NC_014538.1|WP_003867230.1|878935_879271_+|thioredoxin-family-protein
MEKIIDIENIEQIIKENDMVFLYFSTQDCGICTSLLPKLEGMLVNYPKIKSFHIPIDEIPLASGKFSVFTVPTVIVYVDGKEAIREARFISMDTLEEKISKYYSLFFEETA
>NC_014538.1|WP_009052584.1|879393_880326_+|response-regulator
MKGRNILIVDDNKLTRKILKDILENAGYGVLEAKDGEEALQIYKNKLPDMVILDIVMPGMTGFDLLRILRKEEENLMLPIILLTSQDNFEEKIKGLELGADDYLVKPFNDKELLFKVNNLFQRIEHNRMANPLTGLRGNIDIKEEIKRRIKENKPYAILYIDLDNFKSYNDYYGFLRGDNVIKLTAKILSDAVNLIGNERDFLGHIGGDDFVIITTPDKAEEMCKYIISRFDEEIKYLYDDEDRKRGYIETIGRTGEKMMFPLVSISIAIVTNEFRDFKNDLEISAVAAELKKKLKTMDGSCYLKDRRKG
>NC_014538.1|WP_003867232.1|880384_881119_+|hypothetical-protein
MSNPFVPHGNFKWVVIDGREREIGDSLSKLGIKVLYTEKCADLYDAISFHPDILLHPLGDREIIVAPNVTPEFIRKLKLIGLKVKIGQTFLKRNYPYDIAYNVARLGNTAFHNFKYTDPVLRESLEKKGVKFLNVKQGYTKCNMAIIDDNSFITSDKGIFEVAVSNGFEALLIEPGGVFLKGFEYGFIGGAMGLIGEKKLAVTGVFNSHKNYEKIIEFLNKKGIEIVYLTFKQIKDIGSIIPLI
>NC_014538.1|WP_003867233.1|881174_882053_+|putative-sporulation-protein-YtxC
MQLFSIGVSKDLKLDGENLKHGLKNLAENGIKIAINSNVCGSVTYYSLKVEDKQGFSNVARIRNYIAEAISDIIVNQIDKRIIKKLINKYYHYFSEDEKEEIEKIAYNILEDDVNKETFKLAKKEQIFVLVRDFLKESDYIDLEGFVNFRLRDFIGELSEVTDKAVDEFLMKKEYNEFIGLLKYFVELQDSKVEILNIIVDKNGKFKLYDENNKPISNDFINEIVTELKDGVISDEDALMSTLITIAPKKIFFHSINNMRDNEILETVKKVFNDKVEICYGCELCSKIKCEK
>NC_014538.1|WP_003867234.1|882137_882737_+|DUF445-family-protein
MQFLIRMLFLAFVGAAIGWLTNFVAVKMLFKPLKPVKIFGITLQGLIPKRKYEIAKSIGEIVERELLSFNDLWDRLLTEENRKFLLSNLDLKVKEVTENKLPSFLPKAIKEMISNYIGDIINREVEVFLNSPSNEVVEIISTKLKISEIVEEKIKSFKLEKLEDVVIKIAHSELYMIEIMGGVLGFLIGVLQAIVIQFL
>NC_014538.1|WP_012268764.1|883034_884939_+|threonine--tRNA-ligase
MIIILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFDDEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQEMNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIPEGEEISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTRPENSMGSDEDWELATNALISALNRVNLPYKVNEGDGAFYGPKIDFHLKDSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKEIATKAL
>NC_014538.1|WP_009052582.1|885041_886283_+|MFS-transporter
MKKNLEVYKHLKYNIKMNMINGLAWAIGFNMVNPFIGIYAIKLGADDFQVSLLNSLPALMVVIGVIPVTYLINSLKNVHKFAYIVLYIARAFYFLLALAPFFNKEFQPWIVVILVGVMNLPSMAVGMCWQSFMSELIPHEYRSKVFADRNFWTTIVATITVLVTGWLLDNIVFPINYQVIFTIAFIFGLIESYYFSRFYVVESDLEEANPANFYEAFKNMLESKKFIYFNITSFIYYFTWIMAWPIFTVYKVNFLHANNGWMSIFTIVSSIGSILAFYKWADLSNKKGNGFTVALSALLLGFIPLMWATTKSLYVGAVFDFLGGIAVGGYNMLLLNWLLELLPPTSGKMSYIAVFTLITQIAAFIAPMFGMWLYTQIGYVVFMILTGIARIVVSILYFLVANYEDEIKKVEAK
>NC_014538.1|WP_009052581.1|886294_887347_+|chorismate-synthase
MRYITAGESHGEALIAVIEGLPANLLIDEDFINKELKRRQGGHGRGKRMAIEEDKVHVLSGVSNGKTIGSPLAIQIINKDYENWKGKIVPAMTRPRPGHADLSGAIKYNQRDIRNVLERSSARETAARVAVGSVAKLLLKELNIFVKSKVLEIGGISVEEEWPKIIEEAKSKGDTLGGVIEIIIEGVPIGLGSHVQWDRKLDALLAYHVMSVQAIKGVEFGLGFEAARRPGSLVHDEIYYDKERGFYRKSNNAGGIEGGISNGSPIIIKAAMKPIPTLLKPLNSIDINSKKQVKAAYERSDVTAVEAAACVLEAVCAWVIADECLKKFGGDSIEELKKNYDAYLEYVKNF
>NC_014538.1|WP_013150518.1|887607_888159_+|translation-initiation-factor-IF-3
MRFYFFIILRRCVFINKELQVNEEIRDKEVRLIDQDGKQIGIMSAKEAYKIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKVINVKEIRMSPNIEDHDFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPNMEGRNLIMVLTPRK
>NC_014538.1|WP_003867239.1|888186_888384_+|50S-ribosomal-protein-L35
MPKMKTHRGAAKRFKVLKSGKVKRSKAYKSHLLTHKNAKRKRRLRKATYLVGGDAKNIRRLLPYS

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Crispr_ID: NC_014538_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014538_2

2149186-2149615

Orphan

Consensus_repeat	Method
TTTCAATCCCTTATAGGTAAGCTAAAAAC	CRT
GTTTCAATCCCTTATAGGTAAGCTAAAAAC	CRISPRCasFinder
TTTCAATCCCTTATAGGTAAGCTAAAAAC	PILER-CR

6 spacers

The CRISPR arrays of NC_014538_2

>merge|NC_014538|2|2149186-2149615|CRT,CRISPRCasFinder,PILER-CR
CTAATGGAAGCAATAGGTAGGCTAAAAACCAGCATTACCGCTTGTAAAAGTATTTGTATCTAATTTTAATTTCAATCCCTTATAGGTAAGCTAAAAACAAATTTTTGCAGGGGAGGAGACATAAAACGAAATGAAGTTTCAATCCCTTATAGGTAAGCTAAAAACCGTAACGCCTGATATTTTTCATATTGATTTTTTGTTGTTTCAATCCCTTATAGGTAAGCTAAAAACGAGAGCTGTATTATCGAAGGAAAAAATACTTCAAAGGTTTCAATCCCTTATAGGTAAGCTAAAAACATTCTCCTACCTGATTTATCCCTTGAATTTGAATAGGTTTCAATCCCTTATAGGTAAGCTAAAAACCCACTCCCGCCCAAATTCAAAACCTCATTTTTTCCTTGTTTCAATCCCTTATAGGTAAGCTAAAAAC

>NC_014538|2|1|2149186-2149615|CRT
CTAATGGAAGCAATAGGTAGGCTAAAAAC	CAGCATTACCGCTTGTAAAAGTATTTGTATCTAATTTTAA
TTTCAATCCCTTATAGGTAAGCTAAAAAC	AAATTTTTGCAGGGGAGGAGACATAAAACGAAATGAAG
TTTCAATCCCTTATAGGTAAGCTAAAAAC	CGTAACGCCTGATATTTTTCATATTGATTTTTTGTTG
TTTCAATCCCTTATAGGTAAGCTAAAAAC	GAGAGCTGTATTATCGAAGGAAAAAATACTTCAAAGG
TTTCAATCCCTTATAGGTAAGCTAAAAAC	ATTCTCCTACCTGATTTATCCCTTGAATTTGAATAGG
TTTCAATCCCTTATAGGTAAGCTAAAAAC	CCACTCCCGCCCAAATTCAAAACCTCATTTTTTCCTTG
TTTCAATCCCTTATAGGTAAGCTAAAAAC

>NC_014538|2|1|2149254-2149615|CRISPRCasFinder
ATTTCAATCCCTTATAGGTAAGCTAAAAAC	AAATTTTTGCAGGGGAGGAGACATAAAACGAAATGAA
GTTTCAATCCCTTATAGGTAAGCTAAAAAC	CGTAACGCCTGATATTTTTCATATTGATTTTTTGTT
GTTTCAATCCCTTATAGGTAAGCTAAAAAC	GAGAGCTGTATTATCGAAGGAAAAAATACTTCAAAG
GTTTCAATCCCTTATAGGTAAGCTAAAAAC	ATTCTCCTACCTGATTTATCCCTTGAATTTGAATAG
GTTTCAATCCCTTATAGGTAAGCTAAAAAC	CCACTCCCGCCCAAATTCAAAACCTCATTTTTTCCTT
GTTTCAATCCCTTATAGGTAAGCTAAAAAC

>NC_014538|2|2|2149255-2149615|PILER-CR
TTTCAATCCCTTATAGGTAAGCTAAAAAC	AAATTTTTGCAGGGGAGGAGACATAAAACGAAATGAAG
TTTCAATCCCTTATAGGTAAGCTAAAAAC	CGTAACGCCTGATATTTTTCATATTGATTTTTTGTTG
TTTCAATCCCTTATAGGTAAGCTAAAAAC	GAGAGCTGTATTATCGAAGGAAAAAATACTTCAAAGG
TTTCAATCCCTTATAGGTAAGCTAAAAAC	ATTCTCCTACCTGATTTATCCCTTGAATTTGAATAGG
TTTCAATCCCTTATAGGTAAGCTAAAAAC	CCACTCCCGCCCAAATTCAAAACCTCATTTTTTCCTTG
TTTCAATCCCTTATAGGTAAGCTAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014538.1\|WP_009052231.1\|2140110_2140899_+\|dehydrogenase	unknown	unknown	gnl\|CDD\|238958
NC_014538.1\|WP_009052218.1\|2154343_2155192_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|100105
NC_014538.1\|WP_009052225.1\|2145968_2146109_-\|hypothetical-protein	unknown	unknown	unknown
NC_014538.1\|WP_009052219.1\|2153136_2154222_-\|three-Cys-motif-partner-protein-TcmP	unknown	unknown	gnl\|CDD\|275267
NC_014538.1\|WP_009052216.1\|2155988_2156165_-\|hypothetical-protein	unknown	unknown	unknown
NC_014538.1\|WP_009052214.1\|2157199_2157718_-\|HD-GYP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NC_014538.1\|WP_009052228.1\|2142585_2142822_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NC_014538.1\|WP_004398746.1\|2142807_2142999_-\|hypothetical-protein	unknown	unknown	unknown
NC_014538.1\|WP_009052222.1\|2148939_2149110_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274775
NC_014538.1\|WP_012268625.1\|2145130_2145703_+\|hypothetical-protein	unknown	unknown	unknown
NC_014538.1\|WP_009052226.1\|2143760_2144060_-\|DUF3006-domain-containing-protein	unknown	unknown	gnl\|CDD\|378598
NC_014538.1\|WP_009052220.1\|2152028_2152652_-\|replication-relaxation-family-protein	unknown	unknown	gnl\|CDD\|379384
NC_014538.1\|WP_009052221.1\|2150386_2152060_-\|DUF853-family-protein	unknown	unknown	gnl\|CDD\|274760
NC_014538.1\|WP_009052223.1\|2147418_2148852_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224292
NC_014538.1\|WP_009052224.1\|2146444_2146996_-\|hypothetical-protein	unknown	unknown	unknown
NC_014538.1\|WP_009052212.1\|2158130_2161400_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NC_014538.1\|WP_009052227.1\|2143012_2143675_-\|SdpI-family-protein	unknown	unknown	gnl\|CDD\|379303
NC_014538.1\|WP_009052213.1\|2157747_2158134_-\|prepilin-peptidase	unknown	unknown	unknown
NC_014538.1\|WP_009052217.1\|2155411_2155720_-\|hypothetical-protein	unknown	unknown	unknown
NC_014538.1\|WP_009052215.1\|2156178_2157207_-\|ParM/StbA-family-protein	unknown	unknown	gnl\|CDD\|212669

Protein	Function_ID	Function_description	E-value
NC_014538.1\|WP_009052231.1\|2140110_2140899_+\|dehydrogenase	gnl\|CDD\|238958	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).	3.99835e-60
NC_014538.1\|WP_009052218.1\|2154343_2155192_-\|radical-SAM-protein	gnl\|CDD\|100105	cd01335, Radical_SAM, Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. Mechanistically, they share the transfer of a single electron from the iron-sulfur cluster to SAM, which leads to its reductive cleavage to methionine and a 5'-deoxyadenosyl radical, which, in turn, abstracts a hydrogen from the appropriately positioned carbon atom. Depending on the enzyme, SAM is consumed during this process or it is restored and reused. Radical SAM enzymes catalyze steps in metabolism, DNA repair, the biosynthesis of vitamins and coenzymes, and the biosynthesis of many antibiotics. Examples are biotin synthase (BioB), lipoyl synthase (LipA), pyruvate formate-lyase (PFL), coproporphyrinogen oxidase (HemN), lysine 2,3-aminomutase (LAM), anaerobic ribonucleotide reductase (ARR), and MoaA, an enzyme of the biosynthesis of molybdopterin.	6.50249e-10
NC_014538.1\|WP_009052219.1\|2153136_2154222_-\|three-Cys-motif-partner-protein-TcmP	gnl\|CDD\|275267	TIGR04474, conserved_hypothetical_protein, three-Cys-motif partner protein. Members of this family occur regularly as a partner to as a member of family pfam07505, which has been called a phage protein but which seems to occur also in other contexts. Members average about 400 residues in length, but the conserved region covered by the model averages 260 residues and excludes the C-terminus. Conserved motifs suggest enzymatic activity. Note that its frequent partner protein (see pfam07505) has a three-cysteine motif that resembles the Cx3CxxC motif of radical SAM proteins, and that in one branch (see TIGR04471) actually becomes Cx3CxxC. We suggest the name three-Cys-motif partner protein (tcmP), and renaming pfam07505 to three-Cys-motif family protein.	6.92341e-44
NC_014538.1\|WP_009052214.1\|2157199_2157718_-\|HD-GYP-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	1.65783e-58
NC_014538.1\|WP_009052228.1\|2142585_2142822_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	0.000688024
NC_014538.1\|WP_009052212.1\|2158130_2161400_-\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	1.29795e-18
NC_014538.1\|WP_009052222.1\|2148939_2149110_-\|hypothetical-protein	gnl\|CDD\|274775	TIGR03769, P_ac_wall_RPT, actinobacterial surface-anchored protein domain. This model describes a repeat domain that one to three times in Actinobacterial proteins, some of which have LPXTG-type sortase recognition motifs for covalent attachment to the Gram-positive cell wall. Where it occurs with duplication in an LPXTG-anchored protein, it tends to be adjacent to the substrate-binding protein of the gene trio of an ABC transporter system, where that substrate-binding protein has a single copy of this same domain. This arrangement suggests a substrate-binding relay system, with the LPXTG protein acting as a substrate receptor.	0.0046159
NC_014538.1\|WP_009052226.1\|2143760_2144060_-\|DUF3006-domain-containing-protein	gnl\|CDD\|378598	pfam11213, DUF3006, Protein of unknown function (DUF3006). This family of proteins has no known function.	1.83354e-20
NC_014538.1\|WP_009052220.1\|2152028_2152652_-\|replication-relaxation-family-protein	gnl\|CDD\|379384	pfam13814, Replic_Relax, Replication-relaxation. This family includes proteins which are essential for plasmid replication and plasmid DNA relaxation.	0.000143936
NC_014538.1\|WP_009052221.1\|2150386_2152060_-\|DUF853-family-protein	gnl\|CDD\|274760	TIGR03743, SXT_TraD, conjugative coupling factor TraD, SXT/TOL subfamily. Members of this protein family are the putative conjugative coupling factor, TraD (or TraG), rather distantly related to the well-characterized TraD of the F plasmid. Members are associated with conjugative-transposon-like mobile genetic elements of the class that includes SXT, an antibiotic resistance transfer element in some Vibrio cholerae strains. [Mobile and extrachromosomal element functions, Other].	1.64488e-29
NC_014538.1\|WP_009052223.1\|2147418_2148852_+\|ATP-binding-protein	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	4.24503e-52
NC_014538.1\|WP_009052227.1\|2143012_2143675_-\|SdpI-family-protein	gnl\|CDD\|379303	pfam13630, SdpI, SdpI/YfhL protein family. This family of proteins includes the SdpI and YfhL proteins from B. subtilis. The SdpI protein is a multipass integral membrane protein that protects toxin-producing cells from being killed. Killing is mediated by the exported toxic protein SdpC an extracellular protein that induces the synthesis of an immunity protein.	1.26153e-19
NC_014538.1\|WP_009052215.1\|2156178_2157207_-\|ParM/StbA-family-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	4.63031e-69

>NC_014538.1|WP_009052222.1|2148939_2149110_-|hypothetical-protein
MVIIPRNMPDGTYKIVFTAYKQLAGGGVKTATDTITVRVKGSIYDNSKSQIIGPKF
>NC_014538.1|WP_009052223.1|2147418_2148852_+|ATP-binding-protein
MSITSSENILRILYSYNPWWREGYFPQDLSKPVKRVVYHQAFELLMHPAIRRYVILSGARRVGKTTILYQMIETLLKNQVHPKKILYVSFDHPLFKLSSFDQIINLYETAINQEKEAYIFLDEIQYASDWDRWLKVYYDTKPNWRIIATGSASPALIEGTKESGVGRWTVISVPTLSFYEFCEILGVPERPNNLPDLDLNEISNLNESQLSELMFLLMPLQKYFNKYLTIGGFPEFVFSEDQFLVQRILREDVVDKVIKRDIPSLFNVRNLAVLEKVFLYLCFNSASVINISTISKEIGDVSTVTVENYIHLLENANLIYKSLPIELGGKKVLKAKPKIYVSDPALRNAVLMIDNILLDSKELGITVETAIFKHIYNFYLQTNARIGYFRKSSDNQKEIDVVVEFPHSKSLIEVKFREDTTLSENEAIVEMSQKEKNIASAVLVTKRPEDYGKVKISTKVPITKIPAYAFMYLFGRR
>NC_014538.1|WP_009052224.1|2146444_2146996_-|hypothetical-protein
MTAREIAEEIRKSLKKHGITSRQVSVRAKTYTFDEAIEVRIKDLTVSKKLVEAIAKEYEYVRWDDYTNEILAGGNTYVSVDYDYKALREKAKEFIGIAEEILKEKEKYKDNLMRLAEKDDLVVLYQPYHNGTYPHVKLCKRNKYSCILDNVESYYAVDEYTLSEALVILAYQYGFDFNKVMTK
>NC_014538.1|WP_009052225.1|2145968_2146109_-|hypothetical-protein
MEKSIINLLTVVAAIVGLYIVVNAPKSITIKIEIANFKIEINTKKE
>NC_014538.1|WP_012268625.1|2145130_2145703_+|hypothetical-protein
MEQSLRRLLYSFSSYTTIIRQKIFDKSLLSELSKKVFFEAALPKLVEKLNEENKKIILERNEERKILAKRYEDVVKGINMIVDVIARGYFHPSLDDKLTELEQQKIEIETRLKEMDNLPDTSFVTEEKIKEYLLKDKEVLEAGDPQKIKQILPTYINKIIVYPDRIEAHFRLSVDETVCAWMVAANRSQL
>NC_014538.1|WP_009052226.1|2143760_2144060_-|DUF3006-domain-containing-protein
MKMQECYLNKALKSNITEFNGEVQIMSKKTSRLCIIDRFEGDWAVIEYGNKTFNFPKELLPQNAKEGDVLIFNVLIDEKETENRKKIMEDLAKELFKEA
>NC_014538.1|WP_009052227.1|2143012_2143675_-|SdpI-family-protein
MYENYDVKYEIKKDWWLIAIIILIWIFTFTVFGRLPDKIPMHWNISGQVDSFGPKHDIFILPSIITGIYFAMLYIPLIDPKRANYGKFAGAYRVIRAVLVIILSEVYFVSTYSALGYKIDINRMGNLIIPFMLIGFGSAMGKLRHNYFVGIRTPWTLADEEVWNKTHQLGGKLWLIAGIIGLFASFFTGTWVAILMFVLLITAVIVPIVYSYIVFKNKEK
>NC_014538.1|WP_004398746.1|2142807_2142999_-|hypothetical-protein
MGNNKLGLFVVLLGIFVISTTTYLSRHIYITDFLRGIFNGVGIGLEIIGIIIMQQKKLHLKFM
>NC_014538.1|WP_009052228.1|2142585_2142822_+|methyl-accepting-chemotaxis-protein
MLTVISIIVGFAITKLLGISMKQINVLVEKLSNYDFTVEIDNEGKNEFAEMNSSFKISICERRAFPCHRALWEILHKF
>NC_014538.1|WP_009052231.1|2140110_2140899_+|dehydrogenase
MNIPKETLIRMYLEMVTIRLYEETMAEAYQEGKYPVFNIASGPVPGEMHLAAGQEPVAVGVCMHLKKEDAVVGTHRPHHFAIAKGVDLKRMTAEIFGKVTGLGRGKGGHMHLFDPDVHFSCSGIVGASIPQAVGAALTFKMRKEKRVAVAFFGEIYAMKDVIITSEAGCYNTKISTNGSVSINGKVKMSTIEFDKNIFVKEAGSHGVGSHVLLKGSKNSIVKILYGYEGVELYFDKIGYKLKNGEKIKLYLDKDEKVVEDII
>NC_014538.1|WP_009052221.1|2150386_2152060_-|DUF853-family-protein
MNSRELTQTDKIVILVIGLVGALMFLPGIAFGLIIYAAANKLKAKKWLAYAAAGVITASIVFAVKDFNGLVLNYFKQVIGAYKAMFNSRIPHNLDWIVLIKVGIPVGFTLSLMMELYTAAQPEWVKKKKKIGKDKERSFNERLVKKLEKLSQPDDGTLIGIDEAGNTVKITDEELNGHCLVLGATGAGKTTTLMNFIESAARRGIPVIIVDGKGEIGFAEKVKNMAGKYSRKFYLFSMTHEGSMHYNPLRVGNFTELKDKLISLSEWTEPHYKFLSERYLQSAIKILQKTSEKVDLVNISKRLNYNALLEEAKKLVREGKMDKEEYEAFYDMIDGAKKDIIGLVNRLAVFSESEIGELLSDTEDENTIDLIKCIQEDAAVFFSLDALRFSEYSRLLGRLIVIDLKTTAARMFESNKKVFTIFDEFGVFAGPQVTDFINKSRAAGFHVILSTQELADLRIEGKIELMEQILGNTNIKIIHRQDVPVSAELLSSLIGTRDDITITMQVNEISPTGMGTVKEEKSFIVHPDEIKRLKRGEAFVVRKFPEFFVKKVWVRKI
>NC_014538.1|WP_009052220.1|2152028_2152652_-|replication-relaxation-family-protein
MQLTKRDLEILYWINRMRYVTVNQVAKKFKIGIWYTYKRLKKLCDDEYLYSLRIFRNKPGVYICTKKGAEISGSNLWAPKHYVNLANYEHDLKVVDLSIELERQGEWISMRELRQDSKTDMIPDGVLIKDGKKIAVEVELTKKSEKNLKKKMSYYKRSIDYDEVWYFVSSKAVYDAVEKAAKEMDYVKIFYLSEVLKDEQQRAYANR
>NC_014538.1|WP_009052219.1|2153136_2154222_-|three-Cys-motif-partner-protein-TcmP
MFFNEVKSQSLIKKEIVVKYFDAWAKIMNKRSDRLGYIDLFSGPGNYKDGTDSTPIAIMKLILKNNDYRNKFVTVFNDKNKGYISDLKSAISNLENIKSLKYEPIFLNLELDIKTSDIFAATSIIPSLIFIDPWGYKGVTQKLISSLTKDWGCDAILFFNYNRIRSGIKNPKVEEHMISLFGEKRYLKLREELNKSNCLDKESLIMNEFREAMSDIGIEYILTFRFKNEDKEDTSHYIVFLSKNFTAHNIMKEVMASLSSDKIHGVAKFEYIPDKERQLSLKDLYENPLDELRNELLTQYAGKTITFERLFYEHSKNKPFIKKNYKEVLTRLEEEGKILCNPDKSRRKKNTFSDKVVIKFL
>NC_014538.1|WP_009052218.1|2154343_2155192_-|radical-SAM-protein
MDRITRKTLLYKTGVEYGDYTINHVEGCAHGCKFPCYAYMLAKRFGRIKSYEEWIKPKLVSNSLEILDKELPKLKDKINFVHLSFTTDPFMVGYPEVTNLSLEIIKKLNSNGIKVTTLTKGIYPDELLDKNSYSEYNEYGITLVSLDENFKKEYEPYSSDYKDRIASLKKLHNAGLKTWVSIEPYPTPNIINQDLRVILNEVAFVDKIVFGRLNYNKKVREYLWYKEFYNYCSDVVIRFCEQRNILYHIKDGTITDDAPYILKGYQNDTQDLFFKHTQRAVK
>NC_014538.1|WP_009052217.1|2155411_2155720_-|hypothetical-protein
MKDKKYSFRIRENDEDIEEILSRLSSNERSEFIRSAIRFYAEFKSKLDDIDNKLEEILKKLETKSESLSVSPSVSQSNNEENQKTDETEKLLIESVMDLLSL
>NC_014538.1|WP_009052216.1|2155988_2156165_-|hypothetical-protein
MGKRIRDEEELNYKNVWELMKQMVDYYTSEKKYLTRREIKYIIRVCESGQPSIPIKER
>NC_014538.1|WP_009052215.1|2156178_2157207_-|ParM/StbA-family-protein
MFKVGLDLGYGYVKGINEKGKEVLFPSLVGNAYERVLSGLFGTDNNKADNMHVVIVNENKEEYFVGELARREGKNVSYAFDEDKIYHPNTRALLTASCLLLLPEEEVPVHIVTGLPLEQYIHKKEEFKNMLKNFKVMAYFKGDEKVKTIKFEKVTIFPQAAGAVYHAVMADIQKYLVKGSYIGLIDIGFKTTDYIVFMVEDKLILREDMSGTVEVGMSALNNTVDKIFTQRTGSKIDVSELIRLISDGKIFYKGRELDFTKEIDAVRSEIARVMKDKIKLIWGSKLDFFNTVFLAGGGAKELVEYMKDFYEKIVLVKNAQFANARGFLKVAELEEKKAVNVR
>NC_014538.1|WP_009052214.1|2157199_2157718_-|HD-GYP-domain-containing-protein
MEDLIKHQYSVGVLCRNIGIYIGLPLKEIKLLETAAFFHDIGKLFVPKSLLNKKEPLSIEEFEVVKMHSLYGAELLRKIGFDSIVVSAVRHHHERYDGRGYPDGLHGEKIPLCSRIIAVADAFDVMTAGRIYKKPISNDKAVEELIRCSVTQFDPEVVKIFVKMFKEEDAYV
>NC_014538.1|WP_009052213.1|2157747_2158134_-|prepilin-peptidase
MKILILLILFFAAVEDIKKMEVGYIYPASILILSFINVLLNPYINLNFMLLNSLLIFIVLFLFWLLGGIGGGDVKILTALSFYAGFRIWDILLFSSMIFLLYSLILCRFKAKLPFMPAVAAGTLLSFL
>NC_014538.1|WP_009052212.1|2158130_2161400_-|peptidoglycan-binding-protein
MSKIKVNKRKIIVFTVIGILLLAFILKGLAYMDIISFGFNQNRTRYNYEMYGGIAATQVTSTTKAKLGWYVTGLGPSLSQPLIISPKELGINASQPIVIAFNGNNLYAYESISPYSKSLYDFNTSTSPYTFTPKIVPNSNKKWGPLPVYGSSTVPANPSGSHPTYYVSPNGNKYIAAGSKDGYVFIYQIINGSPVLKLRINTTMVGGTDIVSAPLMMRWQGYNIVVVGNGNGGQVAIGYFTDDFSDVRIADITLGTTYTRISSSAAPVNAGETSPETGFIIGTTHEPNKTADGYLYRIRFSDLFNVISSSTISSRTDILKLGSTGNGVKILQETLNIIGYSLVEDGQFGTRTQAAVKDFQSKNGLTVDGIVGPQTWQKLGSKLTRTYIRPIYQWNYAWGINISKAYAGAGIGIPASFSVDGSNAYFTDVLGGIYKINNIFSSTLNLTVNGNLRNTNNLVNHSPAVDDRYLYIPYYYSDSSKQHGKIVVLDKNNLNVIKQIDFSSSSLKSQLPNSSNYIVYSAVSVGADRIYANVGNYLVTIKKSDWTIDGDGTIQLNAPATGEVSIAHGLVATETSDGIYVYYLAKNGIDLAITNVNPIGYMEPNKNYTVQVTVSLGNSSTSIPATVALYDAGSFNFNTVITGDPVRLNTANAVASAQITLSPNSSQTVNLSFTGTSSDRNLIAVVQPNPPSNPDSYLQYWDYNQTNNTRQFTAPAKRLVDLYVTNLNAGTSNMVGGQTYTCSVVVGLQNASFISGYPVTGTLKIYDAANPSSPFKTQTVSFTSNTTQTVSFNYTGKSSDMILVAEISLASTDKYYETNLSNNKIQTLVKANNGVDLYIASINPGTTYVVPDETYTGSVTVGLQKSYAFPVNGVVKVYDKADSSVFLTKSVQFNSNSTQTFSFSYPGKNTDITLVAEIQLTDTNKYDLDLSNNKKEVTVPYSSEMDKLRGTVTISKTPQYVFTNKHTREDGSVCDMTLNISYTFNKKITSIRAVHVINRYQNKGVLYVEPYSVIKNIGDVTGSAVMKFQYDKPGDENSTLYIYFTAEDGKTAEVQLKIPVNGFYADSKFNLPDPQWKKSEQDNWTVIFK

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Crispr_ID: NC_014538_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014538_3

2340499-2341198

Unclear

Consensus_repeat	Method
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CRISPRCasFinder
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CRT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	PILER-CR

10 spacers

cas4,cas1,cas2,cas3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NC_014538_3

>merge|NC_014538|3|2340499-2341198|CRISPRCasFinder,CRT,PILER-CR
CACTATTTTCAGGATAGGTAGGCTAAAAACTAGAGAGGGTAAAAGCGGCATGGCAAGTTTTTGAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTAAAGGAGGAAGATAAAAATGATAACTTCTGTAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACAAGGTATCAAAAATTATGCTTATTTTGCGCAATAGAGAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCAAGCCAAACAATATACGTTAAGTTTTATTTTGCTGAGTTTCAATTCCTTATAGGTAGGCTAAAAACATCGGGCCGGTCAGGGAAGTGGAACGGTTGTAATTTGTTTCAATTCCTTATAGGTAGGCTAAAAACTGGGGACACAATTTACGATTAGGGACACAAAAACACCGTTTCAATTCCTTATAGGTAGGCTAAAAACCTGTATAAGTTGCAACTCCACTATTATCAAGCAATCTAAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTGGTTTCGGGCTGAACAGGTAAAGGCGTTTTTGCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACGATACATTTACACCAACGGTAAAAAACCTTTAAAAGGGTTTCAATTCCTTATAGGTAGGCTAAAAACTCTTCATGTTCCTATCACCCCAAGCCTGTTATTCTCGTTTCAATTCCTTATAGGTAGGCTAAAAAC

>NC_014538|3|2|2340499-2341198|CRISPRCasFinder
CACTATTTTCAGGATAGGTAGGCTAAAAAC	TAGAGAGGGTAAAAGCGGCATGGCAAGTTTTTGAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAAAGGAGGAAGATAAAAATGATAACTTCTGTAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGGTATCAAAAATTATGCTTATTTTGCGCAATAGAGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAGCCAAACAATATACGTTAAGTTTTATTTTGCTGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATCGGGCCGGTCAGGGAAGTGGAACGGTTGTAATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGGGGACACAATTTACGATTAGGGACACAAAAACACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGTATAAGTTGCAACTCCACTATTATCAAGCAATCTAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGGTTTCGGGCTGAACAGGTAAAGGCGTTTTTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATACATTTACACCAACGGTAAAAAACCTTTAAAAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTTCATGTTCCTATCACCCCAAGCCTGTTATTCTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC

>NC_014538|3|2|2340499-2341198|CRT
CACTATTTTCAGGATAGGTAGGCTAAAAAC	TAGAGAGGGTAAAAGCGGCATGGCAAGTTTTTGAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAAAGGAGGAAGATAAAAATGATAACTTCTGTAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGGTATCAAAAATTATGCTTATTTTGCGCAATAGAGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAGCCAAACAATATACGTTAAGTTTTATTTTGCTGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATCGGGCCGGTCAGGGAAGTGGAACGGTTGTAATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGGGGACACAATTTACGATTAGGGACACAAAAACACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGTATAAGTTGCAACTCCACTATTATCAAGCAATCTAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGGTTTCGGGCTGAACAGGTAAAGGCGTTTTTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATACATTTACACCAACGGTAAAAAACCTTTAAAAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTTCATGTTCCTATCACCCCAAGCCTGTTATTCTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC

>NC_014538|3|3|2340565-2341198|PILER-CR
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAAAGGAGGAAGATAAAAATGATAACTTCTGTAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGGTATCAAAAATTATGCTTATTTTGCGCAATAGAGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAGCCAAACAATATACGTTAAGTTTTATTTTGCTGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATCGGGCCGGTCAGGGAAGTGGAACGGTTGTAATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGGGGACACAATTTACGATTAGGGACACAAAAACACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGTATAAGTTGCAACTCCACTATTATCAAGCAATCTAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGGTTTCGGGCTGAACAGGTAAAGGCGTTTTTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATACATTTACACCAACGGTAAAAAACCTTTAAAAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTTCATGTTCCTATCACCCCAAGCCTGTTATTCTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014538.1\|WP_003869923.1\|2341523_2342744_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NC_014538.1\|WP_009052112.1\|2333268_2334048_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293819
NC_014538.1\|WP_009052104.1\|2369761_2370991_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NC_014538.1\|WP_003867575.1\|2336634_2337627_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NC_014538.1\|WP_009052114.1\|2330293_2331349_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|236013
NC_014538.1\|WP_009052108.1\|2362426_2364763_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_014538.1\|WP_003869923.1\|2347290_2348511_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NC_014538.1\|WP_009052111.1\|2338326_2339055_-\|peptidase-E	unknown	unknown	gnl\|CDD\|153240
NC_014538.1\|WP_003868738.1\|2369351_2369765_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
NC_014538.1\|WP_009052106.1\|2365502_2366384_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NC_014538.1\|WP_003867580.1\|2332621_2333062_-\|ACT-domain-containing-protein	unknown	unknown	gnl\|CDD\|179848
NC_014538.1\|WP_003867584.1\|2329377_2330304_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|234920
NC_014538.1\|WP_009052107.1\|2364777_2365488_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09692_cas5_CAS-I-B	gnl\|CDD\|131641
NC_014538.1\|WP_003871087.1\|2336354_2336618_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_014538.1\|WP_004399629.1\|2370987_2372037_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|273908
NC_014538.1\|WP_009052115.1\|2323597_2328928_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173801
NC_014538.1\|WP_009052105.1\|2366370_2368353_-\|TIGR02556-family-CRISPR-associated-protein	cas8b1	pfam09484_cas8b1_CAS-I-B	gnl\|CDD\|187861
NC_014538.1\|WP_004399630.1\|2368407_2369163_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NC_014538.1\|WP_003867574.1\|2337623_2338121_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_014538.1\|WP_009052113.1\|2331352_2332609_-\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783

Protein	Function_ID	Function_description	E-value
NC_014538.1\|WP_003869923.1\|2341523_2342744_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.09297e-41
NC_014538.1\|WP_009052112.1\|2333268_2334048_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293819	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YycJ protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	5.33492e-58
NC_014538.1\|WP_009052104.1\|2369761_2370991_-\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NC_014538.1\|WP_003867575.1\|2336634_2337627_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	2.18208e-180
NC_014538.1\|WP_009052114.1\|2330293_2331349_-\|threonine-synthase	gnl\|CDD\|236013	PRK07409, PRK07409, threonine synthase; Validated.	0
NC_014538.1\|WP_009052108.1\|2362426_2364763_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.50996e-47
NC_014538.1\|WP_003869923.1\|2347290_2348511_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.09297e-41
NC_014538.1\|WP_009052111.1\|2338326_2339055_-\|peptidase-E	gnl\|CDD\|153240	cd03146, GAT1_Peptidase_E, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.	1.63934e-66
NC_014538.1\|WP_003868738.1\|2369351_2369765_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.66901e-73
NC_014538.1\|WP_009052106.1\|2365502_2366384_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.99433e-73
NC_014538.1\|WP_003867580.1\|2332621_2333062_-\|ACT-domain-containing-protein	gnl\|CDD\|179848	PRK04435, PRK04435, ACT domain-containing protein.	4.00304e-77
NC_014538.1\|WP_003867584.1\|2329377_2330304_-\|homoserine-kinase	gnl\|CDD\|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	3.45498e-130
NC_014538.1\|WP_009052107.1\|2364777_2365488_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	5.77817e-26
NC_014538.1\|WP_003871087.1\|2336354_2336618_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.0037e-34
NC_014538.1\|WP_004399629.1\|2370987_2372037_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|273908	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD. This protein, SufD, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. SufB and SufD are homologous. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	2.61499e-75
NC_014538.1\|WP_009052115.1\|2323597_2328928_-\|S8-family-serine-peptidase	gnl\|CDD\|173801	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	3.56703e-87
NC_014538.1\|WP_009052105.1\|2366370_2368353_-\|TIGR02556-family-CRISPR-associated-protein	gnl\|CDD\|187861	cd09730, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as TM1802 family.	3.66501e-156
NC_014538.1\|WP_004399630.1\|2368407_2369163_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	8.76406e-41
NC_014538.1\|WP_003867574.1\|2337623_2338121_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	6.26269e-66
NC_014538.1\|WP_009052113.1\|2331352_2332609_-\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0

>NC_014538.1|WP_009052111.1|2338326_2339055_-|peptidase-E
MKKVVAIGGGEISKFETFKIDEEIVKLTDKAKPKALFVPTASGEPEAYCDNFDFVYGKMLGCETDILFLIKDDPDSSQIEKKISWADLIYVGGGNTKRMMEIWRSKGVDKMLIDAYQRGTVLSGLSAGAICWFKYGFSDSQRFENQENWHYTKVEGLGLFDAILCPHLNEENRRELFEKFMIDFEGVGIGLENGCAIEIVDDTFKIINSFENAHAYVFRRSENKLFVDEIRHRDYIPFNLLI
>NC_014538.1|WP_003867574.1|2337623_2338121_-|CRISPR-associated-protein-Cas4
MEFEVTGALMQSYTICKRQVWLMAHQIVPDQEHPYIEIGRLIDENSYQRDRKKIHFENVVLDLVRMEKDNILIGEVKKSSKAEDSAKMQLLFYLYKLKQSGITAKGQLFFPEERKREVVELTPEFEREVIKAIEEIKDIVYKEKPPAFIKIPYCKNCGYKEFCMS
>NC_014538.1|WP_003867575.1|2336634_2337627_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTIYIFSDGELKRKDNTLFFEGENGRKFIPVENTSEIMVFGEVSLNKRLLEFLTQSEIILHFFNHYGYYVGSYYPREHLNSGYMILRQAEHYNDGSKRLYLAQKFVEGAYKNIRQVLKYYSNRGKDLEDVIYSIEKLGESVDSTSTINELMAIEGNIREYYYKAFDEIIQNPDFKFDFRSKRPPQNFLNTLISFGNSLMYTTTLSEIYKTHLDPRIGFLHATNFRRFSLNLDVSEIFKPIIVDRTIFTLLSKKMVTKEDFEEDAEGLLLKEKGKKVFVQEFEDKLATTIKHRTLSNNVSYRRLIRLELYKLEKHLIEEEQYKPFIAQW
>NC_014538.1|WP_003871087.1|2336354_2336618_-|CRISPR-associated-endonuclease-Cas2
MFLILVYDVNEKRVNKVLKTCRKYLHWVQNSVLEGEISEANLKKLKIELSRIIDKDEDSVIFYILRTTKYSEREILGLRKGGEDIII
>NC_014538.1|WP_009052112.1|2333268_2334048_-|MBL-fold-metallo-hydrolase
MKFCSLRSGSSGNAIYINHKDVHILIDAGLSGRTIEKALFNIGVTPKSLSAILITHEHKDHIIGAGVLSRRYNIPIYANKATWEVMEKDIKEISEKNKLYFTTGEEFEIGDVKIMPFKKPHDAVEPVGFSFKCGDKKISIATDLGYMTRGVANHLIGSDVVLLEANHDIEMLINGSYPWPLKKRILSNLGHLSNDAAADALMKLFKMKAIGIAFLGHLSQNNNRPELAFATVTNMLKKSGVKFEVRMALRNIESDVVEI
>NC_014538.1|WP_003867580.1|2332621_2333062_-|ACT-domain-containing-protein
MGEDGKLYIIREEILSDSLKKTLKVKELLESGKVKTINEAVKQVGISRSAFYKYRDYVFPFSKFSKGKIITLSMVLDHMPGVLSSILDVVANARGNVVTINQSMPSMGVASVTISIDTQYMEMSLENFLEKLSSQNGVRKIEILGE
>NC_014538.1|WP_009052113.1|2331352_2332609_-|homoserine-dehydrogenase
MKIGLMGLGTVGTGVVHLINQNGKNIEKKIGEKIEIKKILVKDPNKKRTPLAEGKITFDANDILEDEEIDVVVEVMGKEHPALEYIIKALKKGKHVVTANKEVIAVHGKELIKLATENKVSLLYEASVGGGIPIIRPLKQCLAANKIYEIKGILNGTTNYILTEMKEKGFDFEEVLKEAQQKGYAEADPTDDVEGFDAARKLAILSTLAFNKFILPEKIYTKGIKSISKADIKYAEELGYNVKLIAYAKIDEEDRLEAWVHPVMIKKDNPLNGVNGVFNAILVDGNAVGEVMFYGQGAGMMPTASAVVADIMDVKNHIVIQNGCEDGDLLPIVDTVSKYYIRLIAFDKPGVMSKITGILGDKGISLLSVVQKGVLGDTAEIVLITHIANTGKVFEALEEIQNLKEVECIESVIRVEGE
>NC_014538.1|WP_009052114.1|2330293_2331349_-|threonine-synthase
MGWEGLIKAYREFMPKIKEENIVTLKEGNTPLYEAVNLQKLFPGIKIYLKYEGLNPTGSFKDRGMTVAVSQAKEEGSNAVVCASTGNTSASAAAYAAKAGLKSIVLIPGGKIALGKLAQAIAYGAKVIAIDGNFDDALRLVREISQKFPITLVNSINPYRLEGQKTASFEICDELKDAPSYVALPVGNAGNITAYWMGFKEYYNAKRITRLPKMLGFQAAGAAPIVENRVIEKPETIATAIRIGNPASWEKAVAARDESGGLIDKVTDEEILEAYALLAKSEGIFAEPASAASIAGVIKKYKEGFFKEGESVVCVLTGNGLKDPDTAVKLGGEIKTIEANLKALEEVLYGE
>NC_014538.1|WP_003867584.1|2329377_2330304_-|homoserine-kinase
MESDMVKVKVPASSANLGPGFDSIGVALNLYTEISMGFIEEGLLIEVSGEDYKEIETTENNLVYKAAKKVFEKTETQYEGLKIEIRNGIPVGAGLGSSAAAIIGGMLAANELAGGILTHKEILDLAASMEGHADNVAPALNGGLNVTVFDGNTTYYVKKELEEELKFIAFTPKKLLKTEIARNILPQKIDFKDAVFNTGRSSLLTAALFSGRYDLLKIASQDMLHQKYRSKLIPEMYACFEKALEAGAYSVFLSGAGPTIMAICPEEKVKRVVYEVSKVYIDRGIDYRVYKLHCENNGAQVLKASLSI
>NC_014538.1|WP_009052115.1|2323597_2328928_-|S8-family-serine-peptidase
MAKKFLVFLVVFTLVFSAFGTFGYSQQIPTSEYSKLIIDFLKVDYNLLKQIAQDNFKQNFQPYQSKSKIAERLGKEIQNLGEDAQQEIEKYSPDETVRVIIELQQDSVASYALKANKTLKTLAETEKANILNKIAQQQNQVKNELTKNFNFKVRHIYKTAINGISGEVKVKDIEKIKLLPGVKDVRIANEYFLDMTSAVYSTNAPTVWNELGYKGEGMVVAVIDTGIDYRHQDMKVADPNRVKLTKEKVQQIAAQTGLPYKYFTEKVPVGWNWADNNDEIIDIGATQSMHGQHVAGIIAANGNIKGVAPEAQLIVEKVFTNNPNFPSAFSDDIVAGIDHAVAFGADVINMSLGSTAGFVRPDDPEHVAIKNAVDNGVIVVVSAGNSSYSTSAEFYPYAMDPDIGTVGSPGLWLDAIQVAASINPGLTGKSFSVNPAPQGFDKVVYSVGSPSDHDPIDPADVLKGEYEVVYCGLGKPEDFQGKDVSGKVALISRGSITFNAKTINAQNAGAVAAIIYNNTTGTISMALGEGTKIPSVSILKDAGLAIKALLDQGQKVTVKFDGAIATNNLGTPPGDNVTDFSSWGVTPSFDFKPEIMAPGGGIYSTLNKDSYGLMSGTSMSSPHVAGAMALIAEVLKERVAKGELKFENGRDFVEMAKIMAMNTAKVIIDTNDNAAPYTGKILRSPKPYSPRQQGAGMIQIDKAIETPVTITDANGKAGIALGSIGNSVTFTLILKNHSNSDVTYNLKDEYGVLTDYVLWGFNFAETTTLTGATVKFDKDTVTVPANGQATVNVTLIIPQNALQNIFAEGFLSFIPQDSSLPKLSVPYTAFYGSWDEPRIIDSPLYEDDTYYGLTGMAGVINNELYFLGNLGSKTPDPSTIAISPNGDGVFDFVQPVLSFLRNAREFKVSVVDENGNVIREITQEEYIRKNVAATSMARISDSWIWDGTAFNPATGEFEVAPDGQYYMCFESKIDYPNAKTQLLEMPVKVDTIAPEVMINKDYIDKYGYLKDIYISNGKATIEWGGQDEGSGIDSYIILTGKIDPITGNVTNVEAKALPSDANVADVSIPYRYTFIAVVGVDYAGNVSETTIGQNGCIAFNIDIKDNFGPVINVVEPQVGEIFNTRDIVVSGNIQDETTFMGKLYINGELVPVDENNNFKTTVHFDSDGRQKIQFLAIDHLYNENDPSTHEHKTEFEVPIYIDTTTPEITLDTKNLKGYISPNDISLIISGNVHDTGFGYKLYINGNMKSNKEADDYTTFDDTFAEKISLSREGDTFVLIKAIDEAMNTAEVKITARVYTSEVENYAMLTYEGNQIKVPLENVDLVSVAAEPNQIEIPAGKTAKVAITAEFKDRTVDVTNKVRFESADESIAKVEADGTVKGIKQGETTVTAMYQNKTVEIKVKVVAPVQEGIEVQPSSIEVPAGLTSAIKVYSILSNGEKIEVTQSAKYTVADKTIAEYNNGVVKGLAKGNTILKVEYSGSSFEVPIKVTEAVLRDIIVQPLLIEVQIDGTYQMKVTGIYSDGTEKDITKDANYTSKDTSIATVDKGLVKGVKKGTTVININYGGKTISVNVTVKEKPQLQGVVKALALNVREGASTSTKVIGVLPRGTVVTLLEEVNGWYKINYNGKTGYIYGVYVTVMPSSSEVKTGRVTASVLNVREEASTSTKVIGTLSKGTVVTLLEEVNGWYKINYNGKIGYIYGKYVDVISSSSDVTIIKTVKVTAKSGLNVRVSNSTSAAKLGVVPYGAELKVVGEYNGWYKILYKGGFGYVYAKYTK
>NC_014538.1|WP_003869923.1|2341523_2342744_+|IS110-family-transposase
MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMESTGSYWKPIYNLLELESIKILLVNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDREQRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVVSDINGASSRSILEAIINGEENPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNRMLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQKSARTRKGNQKLRSSLIEAARAASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYHILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVTVESAVS
>NC_014538.1|WP_003869923.1|2347290_2348511_+|IS110-family-transposase
MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMESTGSYWKPIYNLLELESIKILLVNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDREQRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVVSDINGASSRSILEAIINGEENPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNRMLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQKSARTRKGNQKLRSSLIEAARAASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYHILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVTVESAVS
>NC_014538.1|WP_009052108.1|2362426_2364763_-|CRISPR-associated-helicase/endonuclease-Cas3
MKYYSHYDEEMKYEKLLYEHLIEVKNLSINQIPEEYKKAYEIIALCHDFGKYTSYFQEYLKTKKKTSLSNHSFISAVFGGYVAIQYYGEENILPLIVYNTILHHHGNLESFSVNLPSKFKDVSRKDFPLNVSEKIDISYKQLKDMRQNLSFIIPDFERLGLAKEFKQFVEEENVIKDTLAILKKLEALSIRRLKSDENYFIHQMLYSALISADKISASNTYLPEELYVDYKTLNKIRENQFEISEKDIDKIRTEIFKVVIENLEKNYNKSKIFSITAPTGTGKTVTGFFAALKLKELLGGNRKIIYSLPFTSIIEQNYGVLFELLEKLDKFKGNSSRYIIKHHNLAMIEYESEYRDYKKTEAELLIENWQSGIIITTFVQLLETLVGARNRMLKKFNALKGSIIILDEIQAINIKYFQLVDYILNKASEYLDLRIIIMTATKPMILNDAVELLDNNEKYFSIFKRTRLMPQMEKLTIESFIEKFKENLEDKSYLIVCNTIMQSLEIYKRLVELGLNREIFYLSTNILPLHRRERINKIKEKLEKEEKIILVSTQVVEAGVDFDFDVVIRDLGPIDSIIQSAGRCNRNGKKEIGDVYVYKMIDEEENLFGKYVYGNTLMNISENILKRYDTIMEEKYFQLINEYFSMVMQNKSSQVSREFIKSIENLDFSEGEYAIDSFSLIENNPGYFEAFFIYDDVAEDIFKKYLKLSNIKDFNARREAYLEIQKNIKDYILSLPKKYINNFQLDKGIPYLPKEGIKDIYDFKTGFKRDIDDKYMIF
>NC_014538.1|WP_009052107.1|2364777_2365488_-|type-I-B-CRISPR-associated-protein-Cas5
MVIFDLWGKFAHFRKFYTNSSSLTYSVPPRTTVEGMIAALLGYERDTYYEKLNAENLYVAVRKMSKTKKIMQSVNYIKATTLGELHFPKQHTQIPFELLISDSKIRYRFYIIHKDENIFREIKERLFKKAPVFPLYFGSAPFSCYIDYVEEVTWDWATSEDFQDIYSVMPSDKIKEIDIKNMKGYLLKERMPRDFGIDRTIKEVTTYVYEDVGHPIRVKVNGEFIKLSNGENIVFM
>NC_014538.1|WP_009052106.1|2365502_2366384_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MSVNNNEILYIYDAKLTNPNGDPDEENRPRMDYEREINLVSDLRLKRYIRDYLMLKGYDIFVRLVDDKPVTADKRVKDLEDSSNEWILENWIDVRMFGATMTVQKDTKTFIGPIQFNWGYSLNKVELLEASITSHFSSSETFAQGTIGKDFRVKYSLIAFSGVVSGHRAEKTKLKEDDLYLLDEALKHAIPNLVTRSKIGQYPRIYMRVEYVDKVTILGDFRDYIELKTTTDSIRDINECSLEMVKLVNLLNENKNKIKNVYYFVDERLELNINGEKVTFEEAFKELPLKKVD
>NC_014538.1|WP_009052105.1|2366370_2368353_-|TIGR02556-family-CRISPR-associated-protein
MIKIIEGIVQIGDIVRENDPVKNIIVELPYKKGDNALHVLKFNFLPEENKLEIDVNEEMDEGTVFKYLYVGKILGNSPLWYASSTSSDYILTETIYNLTKMDFGEELNKKLKDIFEKFYVSIEELEPKYRYVLDLSKSGYKEKSVQDLFKEIKEDKKNENLSPNEIGKKFRKKVSKYFEGYLKKEKNIEPEEIGLYTVFIEGKPLSSYKEYVDAVIESKKPKTQKTKKAGISRGVCSICGSQDAIAFDSSKVKFKFFTTNQIIFASSLSKNNYYKNMQMCSECFSKYQAGENYISNKLSTKLTAFDVLIIPQFIHGKPISKYDLEIATDKIIDSFNTVKSYEGIERLREEIGTSLDLTDEKSYFLLNFIFYEIDSQATKILRLIKDVDPSIFERVRIALENANKDVKEILGEKYKGTITLSTVYYINPIRIKDGKAVKYRDILEIYDAILTGKNLSKKHIINNLVDGVRIIKFKKGGYNIIPEKRYIEFYLLEASMYVKFLEYMGCLKEGERLDVSQLKIDENIKTFISNMNYNEQETAMFLLGYLIGQIGNVQYKKAQKGIQDEGTPNKPILNKINFNGLDKQKIIRLTKDVFNKLNQEKILHYNEVTFYDMKRLIDSNIRNWKLNKDESLFYVLSGYSYATAIPILKEKKEVGSNVSE
>NC_014538.1|WP_004399630.1|2368407_2369163_-|CRISPR-associated-endoribonuclease-Cas6
MRITLEFVGEKNLVLPIHYNYIVQGFLYDLMGDSEFAAFLHDEGFQYEKRKFKLFTFSRIEGEFKILTDSKGQKKISIKPPFKFTVASPLDEFIFDISKNALKKEYCHFNGQKFILNSLNIDNPPVFKNKARIKFISPVVMYTTLKDGDIKYTYYYSPWDEKFSPLLLNNLLKKYELVYKIKAEDPYFKLYPLSEKEDRRYSKMIKYKNVYVKGWMGIYDVESSPELLELAYYTGLGAKNSQGFGCFEIIG
>NC_014538.1|WP_003868738.1|2369351_2369765_-|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MSDLNQLYSEVIMEHYENSPHRRELKDATHKERGHNPLCGDDITLYLKMNGDIIEDASFTGHGCAISQASTSMMIDLIKGKDKKEALRLVQEFIDMIHKKDVNLDELGDAQVLHGVSDFPARVKCALLAWKTLQEIL
>NC_014538.1|WP_009052104.1|2369761_2370991_-|cysteine-desulfurase
MKNIDIERIKKDFPILSVKPHGKRLVYLDNAATTQKPIEVIKAMDKYYEELNANVYRSPHYLSVLSTQAYEEARERVKKFINAKRGESIVFTRNTTESINFIAYTWGMKHINEGDEILLTIAEHHSNILPWQMVAEAKGAKLKYVYLDENFRLSMKDFKEKMSEKVKLVAVQHMSNVLGIINPVEEITHIAHKYGAKVLIDGAQSVPHMPVDVQKIDCDFFAFSGHKMLGPMGIGVLYIKEDLLKEVPPFLRGGEMIDEVYEDHSTFAPSPLKFEAGTPNIEGAYVLISAIDYIEKIGLTNIYKHEGELLEYGLQKMKELDFVKLYGPKDAKERGGIISFNVEGVHPHDVATILDEEGVAVRSGHHCCQPLMRYLGVPATVRASFYLYNDFEDIDALVEGLKKVRKWFK
>NC_014538.1|WP_004399629.1|2370987_2372037_-|Fe-S-cluster-assembly-protein-SufD
MWKRVSMEEIQQPSYKEYTSAVIKDLSHDTVKIKETKKLAGLPTEILALRDKAFGIEGKFINMVKDFYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNLVIVGKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREIIIKGHIGRRIIK

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Crispr_ID: NC_014538_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014538_4

2342830-2346967

Unclear

Consensus_repeat	Method
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CRT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	PILER-CR
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CRISPRCasFinder

62 spacers

cas4,cas1,cas2,cas3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NC_014538_4

>merge|NC_014538|4|2342830-2346967|CRT,PILER-CR,CRISPRCasFinder
CACTATTTTCAGGATAGGTAAGCTAAAAACAATGAAATTCAAATCTTCAACAGTAAAGATTTTGGCGTTTCAATTCCTTATAGGTAGGCTAAAAACCACATACAGGACATTCCCACACCCGCTCCGATAACTGTTTCAATTCCTTATAGGTAGGCTAAAAACAAGATTAGCTATTCTTCAACATCCACAGTATCCCTTCAGTTTCAATTCCTTATAGGTAGGCTAAAAACGAAGAAGTTTTCTTTTATAGATTGTTAGTGGTTTGGTTTCAATTCCTTATAGGTAGGCTAAAAACGAAAGAAGATTTTCACAGCATGGCACTTAAAACAGGTTTCAATTCCTTATAGGTAGGCTAAAAACTCTCAAGGCAACAGGTAGTACACCACAAACAGGAAACAGTTTCAATTCCTTATAGGTAGGCTAAAAACCTGTGGTGACATGCTTTTTAAAGCTTCTGCCTCATTGGTTTCAATTCCTTATAGGTAGGCTAAAAACTACAATGTTGCCCTTCTACTTGCAGCTCTAACACGGGTTTCAATTCCTTATAGGTAGGCTAAAAACGTAATGTGGATGGTATATTGTCATGGAGGTGGAGATAGTTTCAATTCCTTATAGGTAGGCTAAAAACCCATTTCTATGCTTGCAATTATGCGGGCGAAGGAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCAGCGCCTAAAACCAAAATTACGTTTTGCATTGTAGGGTTTCAATTCCTTATAGGTAGGCTAAAAACATTTTGCATTCACCTTCTTCAATTTTCTTCTCTGAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTCTCTGCTTATAACAGTCATTTTCTGTCATGAATTTTGTTTCAATTCCTTATAGGTAGGCTAAAAACAGCGCCATCATACTCGATTTCCTGCCGTATCACAAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACAAGCAATCACCGGCAAAACCAACTGGTATGATGCACCGTTTCAATTCCTTATAGGTAGGCTAAAAACGAACAAGATGTACATGGAGCATATACCGATATCTAGTTTCAATTCCTTATAGGTAGGCTAAAAACTCCTTTTTCTTGCCATTAAAATCACTCCTAAATGTAGTTTCAATTCCTTATAGGTAGGCTAAAAACCTAAAGTGTAGTTTGTATCTCTTACAATCGTTGCGGGTTTCAATTCCTTATAGGTAGGCTAAAAACATTTTTTGAATTTGAAATTCACGAGTCAAAGGGTGTTTCAATTCCTTATAGGTAGGCTAAAAACGGGTTGTGCTTTAAAAAGTTTATGATTAACACTACAGTTTCAATTCCTTATAGGTAGGCTAAAAACATATAGGCCCTGAAATTCCTCTGGTAGTGCTTCTCTGTTTCAATTCCTTATAGGTAGGCTAAAAACCAAAAAGCGCAAGGGGAGCAACAACAAGAACCTATGTTTCAATTCCTTATAGGTAGGCTAAAAACGCGTCCACCTGTAAGTGCAAAAGAATGGGTGGAAGAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCCAGCGTGAGTCAATTTATTCCGTATTCAGTGCGGGGTTTCAATTCCTTATAGGTAGGCTAAAAACGTGAGGAGCGCCAAGAAGACGAGCAGGCGGTGCAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCATACAGTTCCCCGCAAAGAAGTAGCTCCAGCCTGGTTTCAATTCCTTATAGGTAGGCTAAAAACGCCGGGATGAATACACACACATCGGCGCCAGCCGAGTTTCAATTCCTTATAGGTAGGCTAAAAACGGCTAATAAAATGATTTTGCAAGCATTAAAAAGACAGTTTCAATTCCTTATAGGTAGGCTAAAAACATACTCCTTATTTGCCTGTCTATCATCCTTAAATCTGTTTCAATTCCTTATAGGTAGGCTAAAAACCAACTCTGTGGATACACGTCAACCATGTTTGTTTTGTTTCAATTCCTTATAGGTAGGCTAAAAACCAACACATGAGAGTAGACGGAAACGATGATGATAGTCGTTTCAATTCCTTATAGGTAGGCTAAAAACCGGCAGGCCATATTGATGTTAGTAGCACATCTCTAGTTTCAATTCCTTATAGGTAGGCTAAAAACTATTTATATGCTCCTGTACGCATGGCGAGCTGAATAGTTTCAATTCCTTATAGGTAGGCTAAAAACAAAGAAGAGCTTGAAAAGGAGGAGATGAATTCAGAAGTTTCAATTCCTTATAGGTAGGCTAAAAACTCATAGATACCGAATACGTCAAAGTTCTTGAAGACTGTTTCAATTCCTTATAGGTAGGCTAAAAACTTATAAAGCTCAACTACTTCTTTTGGTGTTATATTCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCTGGGGAAGTCTTTAATGAACCTGTGCAGGAATAGTTTCAATTCCTTATAGGTAGGCTAAAAACCCCCCTTGGGTATTTCTACGTAACCGAGATTGAGCGGTTTCAATTCCTTATAGGTAGGCTAAAAACTAGTCCCATGTTACCCATGCTCCAGATGCGGAATACTTGTTTCAATTCCTTATAGGTAGGCTAAAAACGCAGGCTTGGACACTCTTACAAGGTACTTTTACTCGTTTCAATTCCTTATAGGTAGGCTAAAAACGAAGGTTGCCTGGGCTATGTGGACAATCCAGAAGGCAGTTTCAATTCCTTATAGGTAGGCTAAAAACGCGTAGTAGTTTACAATTACAAGTTTTAACTTCAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACGGAGTCTTGGAAAGGACTCCATTACTTCGAACTCGAGTTTCAATTCCTTATAGGTAGGCTAAAAACCCATCACGGATGCACTAAAACCGGCTAAATTCAGCGGTTTCAATTCCTTATAGGTAGGCTAAAAACTTAAAACGTTCTGGAACTGTTCTTGTACGCTATCCGCAGTTTCAATTCCTTATAGGTAGGCTAAAAACGACATAGTATGGAACAAAAGGGTTTTAAGTTCGACGGTTTCAATTCCTTATAGGTAGGCTAAAAACGCTGCTATGACTATCCCAACAGGGCCAGTTATTAGAGGTTTCAATTCCTTATAGGTAGGCTAAAAACCCATCCATTTTACAAAGCAGTATATATCACAAAATAGAGTTTCAATTCCTTATAGGTAGGCTAAAAACTAGGCAATAGTTTATACGTCTAAAACAAAATCAAAGGTTTCAATTCCTTATAGGTAGGCTAAAAACACTCTCTCATCGACGACCTCCGCATCTCCAACCGTGGTTTCAATTCCTTATAGGTAGGCTAAAAACTCATCTGCCGTCAGCCACTCTTTTAGCACTTTGCCTGTTTCAATTCCTTATAGGTAGGCTAAAAACGGCGTAGATAACCCAGACAGGCAGTACACCATAGCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCGTAGTTTTTGAAGAAGTAAAGGAGGATTACTCTTGTTTCAATTCCTTATAGGTAGGCTAAAAACGCATTAAACGGGATTTGGGGGATATAGGGTTTCACAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTGCAAGCTAATCATAAAGAAAATAAAGTCCCTTTTGGGTTTCAATTCCTTATAGGTAGGCTAAAAACGACAATGGTATACCACTTAAGGAATGCGTATCAGAGTTTCAATTCCTTATAGGTAGGCTAAAAACCACTTTTAAAGCAAGGAGCTTTAAAAGGACTTTCTATGTTTCAATTCCTTATAGGTAGGCTAAAAACTTAGCCAGCTTTTTATTTCTGTTGTAGAAATTTTATTGTTTCAATTCCTTATAGGTAGGCTAAAAACCTACATCTAAGAGTGGACGGAACCGAAGAAAATAGTCGTTTCAATTCCTTATAGGTAGGCTAAAAACAAAGTGTATCTCCCAAGACCACCGATACAAGCAATCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACGTTCATTTAACTTCCCTCCTTCGCTGTTTCTATAGTGTTTCAATTCCTTATAGGTAGGCTAAAAACTATTTCAGCATAGTTATTGCTATCCTGCTGGGCATAGTTTCAATTCCTTATAGGTAGGCTAAAAAC

>NC_014538|4|3|2342830-2346967|CRT
CACTATTTTCAGGATAGGTAAGCTAAAAAC	AATGAAATTCAAATCTTCAACAGTAAAGATTTTGGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACATACAGGACATTCCCACACCCGCTCCGATAACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGATTAGCTATTCTTCAACATCCACAGTATCCCTTCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGAAGTTTTCTTTTATAGATTGTTAGTGGTTTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAGAAGATTTTCACAGCATGGCACTTAAAACAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTCAAGGCAACAGGTAGTACACCACAAACAGGAAACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGTGGTGACATGCTTTTTAAAGCTTCTGCCTCATTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACAATGTTGCCCTTCTACTTGCAGCTCTAACACGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAATGTGGATGGTATATTGTCATGGAGGTGGAGATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATTTCTATGCTTGCAATTATGCGGGCGAAGGAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCGCCTAAAACCAAAATTACGTTTTGCATTGTAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTTTGCATTCACCTTCTTCAATTTTCTTCTCTGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTCTGCTTATAACAGTCATTTTCTGTCATGAATTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AGCGCCATCATACTCGATTTCCTGCCGTATCACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGCAATCACCGGCAAAACCAACTGGTATGATGCACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAACAAGATGTACATGGAGCATATACCGATATCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCCTTTTTCTTGCCATTAAAATCACTCCTAAATGTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTAAAGTGTAGTTTGTATCTCTTACAATCGTTGCGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTTTTTGAATTTGAAATTCACGAGTCAAAGGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGGTTGTGCTTTAAAAAGTTTATGATTAACACTACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATATAGGCCCTGAAATTCCTCTGGTAGTGCTTCTCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAAAAGCGCAAGGGGAGCAACAACAAGAACCTAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGTCCACCTGTAAGTGCAAAAGAATGGGTGGAAGAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCAGCGTGAGTCAATTTATTCCGTATTCAGTGCGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTGAGGAGCGCCAAGAAGACGAGCAGGCGGTGCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATACAGTTCCCCGCAAAGAAGTAGCTCCAGCCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCCGGGATGAATACACACACATCGGCGCCAGCCGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGCTAATAAAATGATTTTGCAAGCATTAAAAAGACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATACTCCTTATTTGCCTGTCTATCATCCTTAAATCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAACTCTGTGGATACACGTCAACCATGTTTGTTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAACACATGAGAGTAGACGGAAACGATGATGATAGTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CGGCAGGCCATATTGATGTTAGTAGCACATCTCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATTTATATGCTCCTGTACGCATGGCGAGCTGAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGAAGAGCTTGAAAAGGAGGAGATGAATTCAGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCATAGATACCGAATACGTCAAAGTTCTTGAAGACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTATAAAGCTCAACTACTTCTTTTGGTGTTATATTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGGGGAAGTCTTTAATGAACCTGTGCAGGAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCCCCTTGGGTATTTCTACGTAACCGAGATTGAGCG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGTCCCATGTTACCCATGCTCCAGATGCGGAATACTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAGGCTTGGACACTCTTACAAGGTACTTTTACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGGTTGCCTGGGCTATGTGGACAATCCAGAAGGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGTAGTAGTTTACAATTACAAGTTTTAACTTCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAGTCTTGGAAAGGACTCCATTACTTCGAACTCGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATCACGGATGCACTAAAACCGGCTAAATTCAGCG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAAAACGTTCTGGAACTGTTCTTGTACGCTATCCGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GACATAGTATGGAACAAAAGGGTTTTAAGTTCGACG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCTGCTATGACTATCCCAACAGGGCCAGTTATTAGAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATCCATTTTACAAAGCAGTATATATCACAAAATAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGGCAATAGTTTATACGTCTAAAACAAAATCAAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACTCTCTCATCGACGACCTCCGCATCTCCAACCGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCATCTGCCGTCAGCCACTCTTTTAGCACTTTGCCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGCGTAGATAACCCAGACAGGCAGTACACCATAGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CGTAGTTTTTGAAGAAGTAAAGGAGGATTACTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCATTAAACGGGATTTGGGGGATATAGGGTTTCACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCAAGCTAATCATAAAGAAAATAAAGTCCCTTTTGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GACAATGGTATACCACTTAAGGAATGCGTATCAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACTTTTAAAGCAAGGAGCTTTAAAAGGACTTTCTAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAGCCAGCTTTTTATTTCTGTTGTAGAAATTTTATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTACATCTAAGAGTGGACGGAACCGAAGAAAATAGTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGTGTATCTCCCAAGACCACCGATACAAGCAATCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTTCATTTAACTTCCCTCCTTCGCTGTTTCTATAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATTTCAGCATAGTTATTGCTATCCTGCTGGGCATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC

>NC_014538|4|4|2342896-2346967|PILER-CR
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACATACAGGACATTCCCACACCCGCTCCGATAACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGATTAGCTATTCTTCAACATCCACAGTATCCCTTCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGAAGTTTTCTTTTATAGATTGTTAGTGGTTTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAGAAGATTTTCACAGCATGGCACTTAAAACAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTCAAGGCAACAGGTAGTACACCACAAACAGGAAACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGTGGTGACATGCTTTTTAAAGCTTCTGCCTCATTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACAATGTTGCCCTTCTACTTGCAGCTCTAACACGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAATGTGGATGGTATATTGTCATGGAGGTGGAGATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATTTCTATGCTTGCAATTATGCGGGCGAAGGAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCGCCTAAAACCAAAATTACGTTTTGCATTGTAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTTTGCATTCACCTTCTTCAATTTTCTTCTCTGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTCTGCTTATAACAGTCATTTTCTGTCATGAATTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AGCGCCATCATACTCGATTTCCTGCCGTATCACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGCAATCACCGGCAAAACCAACTGGTATGATGCACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAACAAGATGTACATGGAGCATATACCGATATCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCCTTTTTCTTGCCATTAAAATCACTCCTAAATGTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTAAAGTGTAGTTTGTATCTCTTACAATCGTTGCGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTTTTTGAATTTGAAATTCACGAGTCAAAGGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGGTTGTGCTTTAAAAAGTTTATGATTAACACTACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATATAGGCCCTGAAATTCCTCTGGTAGTGCTTCTCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAAAAGCGCAAGGGGAGCAACAACAAGAACCTAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGTCCACCTGTAAGTGCAAAAGAATGGGTGGAAGAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCAGCGTGAGTCAATTTATTCCGTATTCAGTGCGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTGAGGAGCGCCAAGAAGACGAGCAGGCGGTGCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATACAGTTCCCCGCAAAGAAGTAGCTCCAGCCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCCGGGATGAATACACACACATCGGCGCCAGCCGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGCTAATAAAATGATTTTGCAAGCATTAAAAAGACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATACTCCTTATTTGCCTGTCTATCATCCTTAAATCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAACTCTGTGGATACACGTCAACCATGTTTGTTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAACACATGAGAGTAGACGGAAACGATGATGATAGTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CGGCAGGCCATATTGATGTTAGTAGCACATCTCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATTTATATGCTCCTGTACGCATGGCGAGCTGAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGAAGAGCTTGAAAAGGAGGAGATGAATTCAGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCATAGATACCGAATACGTCAAAGTTCTTGAAGACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTATAAAGCTCAACTACTTCTTTTGGTGTTATATTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGGGGAAGTCTTTAATGAACCTGTGCAGGAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCCCCTTGGGTATTTCTACGTAACCGAGATTGAGCG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGTCCCATGTTACCCATGCTCCAGATGCGGAATACTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAGGCTTGGACACTCTTACAAGGTACTTTTACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGGTTGCCTGGGCTATGTGGACAATCCAGAAGGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGTAGTAGTTTACAATTACAAGTTTTAACTTCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAGTCTTGGAAAGGACTCCATTACTTCGAACTCGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATCACGGATGCACTAAAACCGGCTAAATTCAGCG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAAAACGTTCTGGAACTGTTCTTGTACGCTATCCGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GACATAGTATGGAACAAAAGGGTTTTAAGTTCGACG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCTGCTATGACTATCCCAACAGGGCCAGTTATTAGAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATCCATTTTACAAAGCAGTATATATCACAAAATAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGGCAATAGTTTATACGTCTAAAACAAAATCAAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACTCTCTCATCGACGACCTCCGCATCTCCAACCGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCATCTGCCGTCAGCCACTCTTTTAGCACTTTGCCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGCGTAGATAACCCAGACAGGCAGTACACCATAGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CGTAGTTTTTGAAGAAGTAAAGGAGGATTACTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCATTAAACGGGATTTGGGGGATATAGGGTTTCACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCAAGCTAATCATAAAGAAAATAAAGTCCCTTTTGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GACAATGGTATACCACTTAAGGAATGCGTATCAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACTTTTAAAGCAAGGAGCTTTAAAAGGACTTTCTAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAGCCAGCTTTTTATTTCTGTTGTAGAAATTTTATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTACATCTAAGAGTGGACGGAACCGAAGAAAATAGTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGTGTATCTCCCAAGACCACCGATACAAGCAATCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTTCATTTAACTTCCCTCCTTCGCTGTTTCTATAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATTTCAGCATAGTTATTGCTATCCTGCTGGGCATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC

>NC_014538|4|3|2342896-2346967|CRISPRCasFinder
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACATACAGGACATTCCCACACCCGCTCCGATAACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGATTAGCTATTCTTCAACATCCACAGTATCCCTTCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGAAGTTTTCTTTTATAGATTGTTAGTGGTTTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAGAAGATTTTCACAGCATGGCACTTAAAACAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTCAAGGCAACAGGTAGTACACCACAAACAGGAAACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGTGGTGACATGCTTTTTAAAGCTTCTGCCTCATTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACAATGTTGCCCTTCTACTTGCAGCTCTAACACGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAATGTGGATGGTATATTGTCATGGAGGTGGAGATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATTTCTATGCTTGCAATTATGCGGGCGAAGGAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCGCCTAAAACCAAAATTACGTTTTGCATTGTAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTTTGCATTCACCTTCTTCAATTTTCTTCTCTGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTCTGCTTATAACAGTCATTTTCTGTCATGAATTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AGCGCCATCATACTCGATTTCCTGCCGTATCACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGCAATCACCGGCAAAACCAACTGGTATGATGCACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAACAAGATGTACATGGAGCATATACCGATATCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCCTTTTTCTTGCCATTAAAATCACTCCTAAATGTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTAAAGTGTAGTTTGTATCTCTTACAATCGTTGCGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTTTTTGAATTTGAAATTCACGAGTCAAAGGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGGTTGTGCTTTAAAAAGTTTATGATTAACACTACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATATAGGCCCTGAAATTCCTCTGGTAGTGCTTCTCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAAAAGCGCAAGGGGAGCAACAACAAGAACCTAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGTCCACCTGTAAGTGCAAAAGAATGGGTGGAAGAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCAGCGTGAGTCAATTTATTCCGTATTCAGTGCGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTGAGGAGCGCCAAGAAGACGAGCAGGCGGTGCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATACAGTTCCCCGCAAAGAAGTAGCTCCAGCCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCCGGGATGAATACACACACATCGGCGCCAGCCGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGCTAATAAAATGATTTTGCAAGCATTAAAAAGACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATACTCCTTATTTGCCTGTCTATCATCCTTAAATCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAACTCTGTGGATACACGTCAACCATGTTTGTTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAACACATGAGAGTAGACGGAAACGATGATGATAGTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CGGCAGGCCATATTGATGTTAGTAGCACATCTCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATTTATATGCTCCTGTACGCATGGCGAGCTGAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGAAGAGCTTGAAAAGGAGGAGATGAATTCAGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCATAGATACCGAATACGTCAAAGTTCTTGAAGACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTATAAAGCTCAACTACTTCTTTTGGTGTTATATTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGGGGAAGTCTTTAATGAACCTGTGCAGGAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCCCCTTGGGTATTTCTACGTAACCGAGATTGAGCG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGTCCCATGTTACCCATGCTCCAGATGCGGAATACTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAGGCTTGGACACTCTTACAAGGTACTTTTACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGGTTGCCTGGGCTATGTGGACAATCCAGAAGGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGTAGTAGTTTACAATTACAAGTTTTAACTTCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAGTCTTGGAAAGGACTCCATTACTTCGAACTCGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATCACGGATGCACTAAAACCGGCTAAATTCAGCG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAAAACGTTCTGGAACTGTTCTTGTACGCTATCCGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GACATAGTATGGAACAAAAGGGTTTTAAGTTCGACG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCTGCTATGACTATCCCAACAGGGCCAGTTATTAGAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATCCATTTTACAAAGCAGTATATATCACAAAATAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGGCAATAGTTTATACGTCTAAAACAAAATCAAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACTCTCTCATCGACGACCTCCGCATCTCCAACCGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCATCTGCCGTCAGCCACTCTTTTAGCACTTTGCCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGCGTAGATAACCCAGACAGGCAGTACACCATAGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CGTAGTTTTTGAAGAAGTAAAGGAGGATTACTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCATTAAACGGGATTTGGGGGATATAGGGTTTCACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCAAGCTAATCATAAAGAAAATAAAGTCCCTTTTGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GACAATGGTATACCACTTAAGGAATGCGTATCAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACTTTTAAAGCAAGGAGCTTTAAAAGGACTTTCTAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAGCCAGCTTTTTATTTCTGTTGTAGAAATTTTATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTACATCTAAGAGTGGACGGAACCGAAGAAAATAGTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGTGTATCTCCCAAGACCACCGATACAAGCAATCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTTCATTTAACTTCCCTCCTTCGCTGTTTCTATAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATTTCAGCATAGTTATTGCTATCCTGCTGGGCATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014538.1\|WP_003867580.1\|2332621_2333062_-\|ACT-domain-containing-protein	unknown	unknown	gnl\|CDD\|179848
NC_014538.1\|WP_009052112.1\|2333268_2334048_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293819
NC_014538.1\|WP_009052104.1\|2369761_2370991_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NC_014538.1\|WP_009052114.1\|2330293_2331349_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|236013
NC_014538.1\|WP_009052108.1\|2362426_2364763_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_014538.1\|WP_003869923.1\|2347290_2348511_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NC_014538.1\|WP_009052111.1\|2338326_2339055_-\|peptidase-E	unknown	unknown	gnl\|CDD\|153240
NC_014538.1\|WP_003868738.1\|2369351_2369765_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
NC_014538.1\|WP_009052106.1\|2365502_2366384_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NC_014538.1\|WP_003869923.1\|2341523_2342744_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NC_014538.1\|WP_003867584.1\|2329377_2330304_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|234920
NC_014538.1\|WP_003871433.1\|2372047_2373451_-\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
NC_014538.1\|WP_009052107.1\|2364777_2365488_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09692_cas5_CAS-I-B	gnl\|CDD\|131641
NC_014538.1\|WP_003871087.1\|2336354_2336618_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_014538.1\|WP_004399629.1\|2370987_2372037_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|273908
NC_014538.1\|WP_003867575.1\|2336634_2337627_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NC_014538.1\|WP_009052105.1\|2366370_2368353_-\|TIGR02556-family-CRISPR-associated-protein	cas8b1	pfam09484_cas8b1_CAS-I-B	gnl\|CDD\|187861
NC_014538.1\|WP_004399630.1\|2368407_2369163_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NC_014538.1\|WP_003867574.1\|2337623_2338121_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_014538.1\|WP_009052113.1\|2331352_2332609_-\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783

Protein	Function_ID	Function_description	E-value
NC_014538.1\|WP_003867580.1\|2332621_2333062_-\|ACT-domain-containing-protein	gnl\|CDD\|179848	PRK04435, PRK04435, ACT domain-containing protein.	4.00304e-77
NC_014538.1\|WP_009052112.1\|2333268_2334048_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293819	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YycJ protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	5.33492e-58
NC_014538.1\|WP_009052104.1\|2369761_2370991_-\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NC_014538.1\|WP_009052114.1\|2330293_2331349_-\|threonine-synthase	gnl\|CDD\|236013	PRK07409, PRK07409, threonine synthase; Validated.	0
NC_014538.1\|WP_009052108.1\|2362426_2364763_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.50996e-47
NC_014538.1\|WP_003869923.1\|2347290_2348511_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.09297e-41
NC_014538.1\|WP_009052111.1\|2338326_2339055_-\|peptidase-E	gnl\|CDD\|153240	cd03146, GAT1_Peptidase_E, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.	1.63934e-66
NC_014538.1\|WP_003868738.1\|2369351_2369765_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.66901e-73
NC_014538.1\|WP_009052106.1\|2365502_2366384_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.99433e-73
NC_014538.1\|WP_003869923.1\|2341523_2342744_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.09297e-41
NC_014538.1\|WP_003867584.1\|2329377_2330304_-\|homoserine-kinase	gnl\|CDD\|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	3.45498e-130
NC_014538.1\|WP_003871433.1\|2372047_2373451_-\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NC_014538.1\|WP_009052107.1\|2364777_2365488_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	5.77817e-26
NC_014538.1\|WP_003871087.1\|2336354_2336618_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.0037e-34
NC_014538.1\|WP_004399629.1\|2370987_2372037_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|273908	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD. This protein, SufD, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. SufB and SufD are homologous. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	2.61499e-75
NC_014538.1\|WP_003867575.1\|2336634_2337627_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	2.18208e-180
NC_014538.1\|WP_009052105.1\|2366370_2368353_-\|TIGR02556-family-CRISPR-associated-protein	gnl\|CDD\|187861	cd09730, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as TM1802 family.	3.66501e-156
NC_014538.1\|WP_004399630.1\|2368407_2369163_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	8.76406e-41
NC_014538.1\|WP_003867574.1\|2337623_2338121_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	6.26269e-66
NC_014538.1\|WP_009052113.1\|2331352_2332609_-\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0

>NC_014538.1|WP_003869923.1|2341523_2342744_+|IS110-family-transposase
MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMESTGSYWKPIYNLLELESIKILLVNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDREQRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVVSDINGASSRSILEAIINGEENPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNRMLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQKSARTRKGNQKLRSSLIEAARAASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYHILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVTVESAVS
>NC_014538.1|WP_009052111.1|2338326_2339055_-|peptidase-E
MKKVVAIGGGEISKFETFKIDEEIVKLTDKAKPKALFVPTASGEPEAYCDNFDFVYGKMLGCETDILFLIKDDPDSSQIEKKISWADLIYVGGGNTKRMMEIWRSKGVDKMLIDAYQRGTVLSGLSAGAICWFKYGFSDSQRFENQENWHYTKVEGLGLFDAILCPHLNEENRRELFEKFMIDFEGVGIGLENGCAIEIVDDTFKIINSFENAHAYVFRRSENKLFVDEIRHRDYIPFNLLI
>NC_014538.1|WP_003867574.1|2337623_2338121_-|CRISPR-associated-protein-Cas4
MEFEVTGALMQSYTICKRQVWLMAHQIVPDQEHPYIEIGRLIDENSYQRDRKKIHFENVVLDLVRMEKDNILIGEVKKSSKAEDSAKMQLLFYLYKLKQSGITAKGQLFFPEERKREVVELTPEFEREVIKAIEEIKDIVYKEKPPAFIKIPYCKNCGYKEFCMS
>NC_014538.1|WP_003867575.1|2336634_2337627_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTIYIFSDGELKRKDNTLFFEGENGRKFIPVENTSEIMVFGEVSLNKRLLEFLTQSEIILHFFNHYGYYVGSYYPREHLNSGYMILRQAEHYNDGSKRLYLAQKFVEGAYKNIRQVLKYYSNRGKDLEDVIYSIEKLGESVDSTSTINELMAIEGNIREYYYKAFDEIIQNPDFKFDFRSKRPPQNFLNTLISFGNSLMYTTTLSEIYKTHLDPRIGFLHATNFRRFSLNLDVSEIFKPIIVDRTIFTLLSKKMVTKEDFEEDAEGLLLKEKGKKVFVQEFEDKLATTIKHRTLSNNVSYRRLIRLELYKLEKHLIEEEQYKPFIAQW
>NC_014538.1|WP_003871087.1|2336354_2336618_-|CRISPR-associated-endonuclease-Cas2
MFLILVYDVNEKRVNKVLKTCRKYLHWVQNSVLEGEISEANLKKLKIELSRIIDKDEDSVIFYILRTTKYSEREILGLRKGGEDIII
>NC_014538.1|WP_009052112.1|2333268_2334048_-|MBL-fold-metallo-hydrolase
MKFCSLRSGSSGNAIYINHKDVHILIDAGLSGRTIEKALFNIGVTPKSLSAILITHEHKDHIIGAGVLSRRYNIPIYANKATWEVMEKDIKEISEKNKLYFTTGEEFEIGDVKIMPFKKPHDAVEPVGFSFKCGDKKISIATDLGYMTRGVANHLIGSDVVLLEANHDIEMLINGSYPWPLKKRILSNLGHLSNDAAADALMKLFKMKAIGIAFLGHLSQNNNRPELAFATVTNMLKKSGVKFEVRMALRNIESDVVEI
>NC_014538.1|WP_003867580.1|2332621_2333062_-|ACT-domain-containing-protein
MGEDGKLYIIREEILSDSLKKTLKVKELLESGKVKTINEAVKQVGISRSAFYKYRDYVFPFSKFSKGKIITLSMVLDHMPGVLSSILDVVANARGNVVTINQSMPSMGVASVTISIDTQYMEMSLENFLEKLSSQNGVRKIEILGE
>NC_014538.1|WP_009052113.1|2331352_2332609_-|homoserine-dehydrogenase
MKIGLMGLGTVGTGVVHLINQNGKNIEKKIGEKIEIKKILVKDPNKKRTPLAEGKITFDANDILEDEEIDVVVEVMGKEHPALEYIIKALKKGKHVVTANKEVIAVHGKELIKLATENKVSLLYEASVGGGIPIIRPLKQCLAANKIYEIKGILNGTTNYILTEMKEKGFDFEEVLKEAQQKGYAEADPTDDVEGFDAARKLAILSTLAFNKFILPEKIYTKGIKSISKADIKYAEELGYNVKLIAYAKIDEEDRLEAWVHPVMIKKDNPLNGVNGVFNAILVDGNAVGEVMFYGQGAGMMPTASAVVADIMDVKNHIVIQNGCEDGDLLPIVDTVSKYYIRLIAFDKPGVMSKITGILGDKGISLLSVVQKGVLGDTAEIVLITHIANTGKVFEALEEIQNLKEVECIESVIRVEGE
>NC_014538.1|WP_009052114.1|2330293_2331349_-|threonine-synthase
MGWEGLIKAYREFMPKIKEENIVTLKEGNTPLYEAVNLQKLFPGIKIYLKYEGLNPTGSFKDRGMTVAVSQAKEEGSNAVVCASTGNTSASAAAYAAKAGLKSIVLIPGGKIALGKLAQAIAYGAKVIAIDGNFDDALRLVREISQKFPITLVNSINPYRLEGQKTASFEICDELKDAPSYVALPVGNAGNITAYWMGFKEYYNAKRITRLPKMLGFQAAGAAPIVENRVIEKPETIATAIRIGNPASWEKAVAARDESGGLIDKVTDEEILEAYALLAKSEGIFAEPASAASIAGVIKKYKEGFFKEGESVVCVLTGNGLKDPDTAVKLGGEIKTIEANLKALEEVLYGE
>NC_014538.1|WP_003867584.1|2329377_2330304_-|homoserine-kinase
MESDMVKVKVPASSANLGPGFDSIGVALNLYTEISMGFIEEGLLIEVSGEDYKEIETTENNLVYKAAKKVFEKTETQYEGLKIEIRNGIPVGAGLGSSAAAIIGGMLAANELAGGILTHKEILDLAASMEGHADNVAPALNGGLNVTVFDGNTTYYVKKELEEELKFIAFTPKKLLKTEIARNILPQKIDFKDAVFNTGRSSLLTAALFSGRYDLLKIASQDMLHQKYRSKLIPEMYACFEKALEAGAYSVFLSGAGPTIMAICPEEKVKRVVYEVSKVYIDRGIDYRVYKLHCENNGAQVLKASLSI
>NC_014538.1|WP_003869923.1|2347290_2348511_+|IS110-family-transposase
MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMESTGSYWKPIYNLLELESIKILLVNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDREQRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVVSDINGASSRSILEAIINGEENPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNRMLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQKSARTRKGNQKLRSSLIEAARAASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYHILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVTVESAVS
>NC_014538.1|WP_009052108.1|2362426_2364763_-|CRISPR-associated-helicase/endonuclease-Cas3
MKYYSHYDEEMKYEKLLYEHLIEVKNLSINQIPEEYKKAYEIIALCHDFGKYTSYFQEYLKTKKKTSLSNHSFISAVFGGYVAIQYYGEENILPLIVYNTILHHHGNLESFSVNLPSKFKDVSRKDFPLNVSEKIDISYKQLKDMRQNLSFIIPDFERLGLAKEFKQFVEEENVIKDTLAILKKLEALSIRRLKSDENYFIHQMLYSALISADKISASNTYLPEELYVDYKTLNKIRENQFEISEKDIDKIRTEIFKVVIENLEKNYNKSKIFSITAPTGTGKTVTGFFAALKLKELLGGNRKIIYSLPFTSIIEQNYGVLFELLEKLDKFKGNSSRYIIKHHNLAMIEYESEYRDYKKTEAELLIENWQSGIIITTFVQLLETLVGARNRMLKKFNALKGSIIILDEIQAINIKYFQLVDYILNKASEYLDLRIIIMTATKPMILNDAVELLDNNEKYFSIFKRTRLMPQMEKLTIESFIEKFKENLEDKSYLIVCNTIMQSLEIYKRLVELGLNREIFYLSTNILPLHRRERINKIKEKLEKEEKIILVSTQVVEAGVDFDFDVVIRDLGPIDSIIQSAGRCNRNGKKEIGDVYVYKMIDEEENLFGKYVYGNTLMNISENILKRYDTIMEEKYFQLINEYFSMVMQNKSSQVSREFIKSIENLDFSEGEYAIDSFSLIENNPGYFEAFFIYDDVAEDIFKKYLKLSNIKDFNARREAYLEIQKNIKDYILSLPKKYINNFQLDKGIPYLPKEGIKDIYDFKTGFKRDIDDKYMIF
>NC_014538.1|WP_009052107.1|2364777_2365488_-|type-I-B-CRISPR-associated-protein-Cas5
MVIFDLWGKFAHFRKFYTNSSSLTYSVPPRTTVEGMIAALLGYERDTYYEKLNAENLYVAVRKMSKTKKIMQSVNYIKATTLGELHFPKQHTQIPFELLISDSKIRYRFYIIHKDENIFREIKERLFKKAPVFPLYFGSAPFSCYIDYVEEVTWDWATSEDFQDIYSVMPSDKIKEIDIKNMKGYLLKERMPRDFGIDRTIKEVTTYVYEDVGHPIRVKVNGEFIKLSNGENIVFM
>NC_014538.1|WP_009052106.1|2365502_2366384_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MSVNNNEILYIYDAKLTNPNGDPDEENRPRMDYEREINLVSDLRLKRYIRDYLMLKGYDIFVRLVDDKPVTADKRVKDLEDSSNEWILENWIDVRMFGATMTVQKDTKTFIGPIQFNWGYSLNKVELLEASITSHFSSSETFAQGTIGKDFRVKYSLIAFSGVVSGHRAEKTKLKEDDLYLLDEALKHAIPNLVTRSKIGQYPRIYMRVEYVDKVTILGDFRDYIELKTTTDSIRDINECSLEMVKLVNLLNENKNKIKNVYYFVDERLELNINGEKVTFEEAFKELPLKKVD
>NC_014538.1|WP_009052105.1|2366370_2368353_-|TIGR02556-family-CRISPR-associated-protein
MIKIIEGIVQIGDIVRENDPVKNIIVELPYKKGDNALHVLKFNFLPEENKLEIDVNEEMDEGTVFKYLYVGKILGNSPLWYASSTSSDYILTETIYNLTKMDFGEELNKKLKDIFEKFYVSIEELEPKYRYVLDLSKSGYKEKSVQDLFKEIKEDKKNENLSPNEIGKKFRKKVSKYFEGYLKKEKNIEPEEIGLYTVFIEGKPLSSYKEYVDAVIESKKPKTQKTKKAGISRGVCSICGSQDAIAFDSSKVKFKFFTTNQIIFASSLSKNNYYKNMQMCSECFSKYQAGENYISNKLSTKLTAFDVLIIPQFIHGKPISKYDLEIATDKIIDSFNTVKSYEGIERLREEIGTSLDLTDEKSYFLLNFIFYEIDSQATKILRLIKDVDPSIFERVRIALENANKDVKEILGEKYKGTITLSTVYYINPIRIKDGKAVKYRDILEIYDAILTGKNLSKKHIINNLVDGVRIIKFKKGGYNIIPEKRYIEFYLLEASMYVKFLEYMGCLKEGERLDVSQLKIDENIKTFISNMNYNEQETAMFLLGYLIGQIGNVQYKKAQKGIQDEGTPNKPILNKINFNGLDKQKIIRLTKDVFNKLNQEKILHYNEVTFYDMKRLIDSNIRNWKLNKDESLFYVLSGYSYATAIPILKEKKEVGSNVSE
>NC_014538.1|WP_004399630.1|2368407_2369163_-|CRISPR-associated-endoribonuclease-Cas6
MRITLEFVGEKNLVLPIHYNYIVQGFLYDLMGDSEFAAFLHDEGFQYEKRKFKLFTFSRIEGEFKILTDSKGQKKISIKPPFKFTVASPLDEFIFDISKNALKKEYCHFNGQKFILNSLNIDNPPVFKNKARIKFISPVVMYTTLKDGDIKYTYYYSPWDEKFSPLLLNNLLKKYELVYKIKAEDPYFKLYPLSEKEDRRYSKMIKYKNVYVKGWMGIYDVESSPELLELAYYTGLGAKNSQGFGCFEIIG
>NC_014538.1|WP_003868738.1|2369351_2369765_-|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MSDLNQLYSEVIMEHYENSPHRRELKDATHKERGHNPLCGDDITLYLKMNGDIIEDASFTGHGCAISQASTSMMIDLIKGKDKKEALRLVQEFIDMIHKKDVNLDELGDAQVLHGVSDFPARVKCALLAWKTLQEIL
>NC_014538.1|WP_009052104.1|2369761_2370991_-|cysteine-desulfurase
MKNIDIERIKKDFPILSVKPHGKRLVYLDNAATTQKPIEVIKAMDKYYEELNANVYRSPHYLSVLSTQAYEEARERVKKFINAKRGESIVFTRNTTESINFIAYTWGMKHINEGDEILLTIAEHHSNILPWQMVAEAKGAKLKYVYLDENFRLSMKDFKEKMSEKVKLVAVQHMSNVLGIINPVEEITHIAHKYGAKVLIDGAQSVPHMPVDVQKIDCDFFAFSGHKMLGPMGIGVLYIKEDLLKEVPPFLRGGEMIDEVYEDHSTFAPSPLKFEAGTPNIEGAYVLISAIDYIEKIGLTNIYKHEGELLEYGLQKMKELDFVKLYGPKDAKERGGIISFNVEGVHPHDVATILDEEGVAVRSGHHCCQPLMRYLGVPATVRASFYLYNDFEDIDALVEGLKKVRKWFK
>NC_014538.1|WP_004399629.1|2370987_2372037_-|Fe-S-cluster-assembly-protein-SufD
MWKRVSMEEIQQPSYKEYTSAVIKDLSHDTVKIKETKKLAGLPTEILALRDKAFGIEGKFINMVKDFYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNLVIVGKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREIIIKGHIGRRIIK
>NC_014538.1|WP_003871433.1|2372047_2373451_-|Fe-S-cluster-assembly-protein-SufB
MKKPDIKEIDFSIYDVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQKMPMPTWGVDLSQLDIDSIIAYIRPSAKMQRSWDEVPEEIRRTFERLGIPEAERKALAGVGAQYDSEVVYHNIKESLTQQGVIFEDMDTAIKKYPDIIKEYFMTKNVTPYDHKFAALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVHFIEGCSAPQYSVSNLHAGCVELFVNEGARIIYSTIENWSKNTYNLNTKRAIVEKDGIIEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTFAAKGQHLDTGSKMIHLAPHTSSKVLAKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSDTMPVIEIENDNVDIGHEAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG

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Crispr_ID: NC_014538_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014538_5

2348597-2362246

TypeI-B

Consensus_repeat	Method
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CRISPRCasFinder
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CRT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	PILER-CR

205 spacers

cas4,cas1,cas2,cas3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NC_014538_5

>merge|NC_014538|5|2348597-2362246|CRISPRCasFinder,CRT,PILER-CR
CACTATTTTCAGGATAGGTAGGCTAAAAACCTTTTCTGACCACCAAAAACCTATGTGGCTGTTCTGGTTTCAATTCCTTATAGGTAGGCTAAAAACGATTCTACTGCATTATTACATCTTGTGCTACATCAGTTTCAATTCCTTATAGGTAGGCTAAAAACTCAGCAGGTTTTATGTCAAGCCTATCAAGCACGTCTTGTTTCAATTCCTTATAGGTAGGCTAAAAACTTAGCCTCAGCTAATCTCTGTTGAAACTCCTCACTCGTTTCAATTCCTTATAGGTAGGCTAAAAACCACATTGAAAGATGGCACGGTTATTAAAATAGACGAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTCAAAGCGTATTTACATTTTAGCAGATGTGGATGGGTTTCAATTCCTTATAGGTAGGCTAAAAACTTGCCACGTTCAGGGGCTCTTCTTTTCATTTCTCTTGTTTCAATTCCTTATAGGTAGGCTAAAAACCAACGTCTATGTCTATGCTTGCGTGCGGCAGATTGCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACACCCACCAAACCAACAGGTGAGATTGTTCCACGATAGTTTCAATTCCTTATAGGTAGGCTAAAAACTGTGCCTATTTCAGACTCAAAACCACCATTTGCCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACACAAGCCCAGTAGGGCTTTTATTTTTGCGCAGAAAGGAGTTTCAATTCCTTATAGGTAGGCTAAAAACCAATAAAGAGCTGTTTGAGATGCTACAACAAATTAGGCTGTTTCAATTCCTTATAGGTAGGCTAAAAACTGCTCCGACGTGCCATAACTGCTATAGCAGATACGTGTTTCAATTCCTTATAGGTAGGCTAAAAACGTTGTGAAACTGCCGGAGGATATTGGTGAAGAAAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCCGAGTTCAATACCTTCACCCACCAAACCAACAGGGTTTCAATTCCTTATAGGTAGGCTAAAAACATGTAGACGTATATGTCGCCGCCAGCACCAGCAACCGTTTCAATTCCTTATAGGTAGGCTAAAAACGCTGCTCTTCTTTTTGAAACTTTTTAGCTTCTGCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACTAAGTATCCGCACCAATATCTTTTGTGCTGCAAATACGTTTCAATTCCTTATAGGTAGGCTAAAAACACAAATTGAAACGAAAGGAGGTATGCTTATGAGCTGTTTCAATTCCTTATAGGTAGGCTAAAAACTAGGTTTTAAAGTACACTACAGGGTTGGTGGTGGTGGTTTCAATTCCTTATAGGTAGGCTAAAAACGAAGTCGCCGTTATTAGCTTTGCAAAAGGCTATATAGTTTCAATTCCTTATAGGTAGGCTAAAAACCTAATGAAGGATTACTGCGCCCATTCTCAATATCACTGTTTCAATTCCTTATAGGTAGGCTAAAAACCTACTGTGAATTAGCACAAAGAGAGGAGGCAGCGATAGTTTCAATTCCTTATAGGTAGGCTAAAAACTCCCAATTTTGGGGATTTATTAAATCCTCTAATAAATGTTTCAATTCCTTATAGGTAGGCTAAAAACGGAGTAAATCTTTTTTAGTGACTTTGTACTTTTTAGTGGTTTCAATTCCTTATAGGTAGGCTAAAAACTTCTCACATTCAACCCAATATCAGCTTTACATTGGTGTTTCAATTCCTTATAGGTAGGCTAAAAACAAATTATCAAGTTATCTTCCTTTGCACTCTAAATGGGTTTCAATTCCTTATAGGTAGGCTAAAAACTATCGGATTCCTACGTAAAAATTACAAAGGTTGCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCAGGTATGAAATCTCCGTATTCTGCAAACTCGTCTTTCGTTTCAATTCCTTATAGGTAGGCTAAAAACAATTGTTTTTCTTCTTTTGTAAGTTCAAGTTCAAGCCGTTTCAATTCCTTATAGGTAGGCTAAAAACGCATAAACAAAGCAGAAGTAGTACCAAGCCCTTACTGTTTCAATTCCTTATAGGTAGGCTAAAAACAAATGTTTGTTTTGACAAACTCAATTACTTTCTTTTCGTTTCAATTCCTTATAGGTAGGCTAAAAACTGATGAATTAGGCCGAATACTTCGACCTGTCGTTGGGTGTTTCAATTCCTTATAGGTAGGCTAAAAACTATTGAAAGTAGATTTGGAAAGATGCATAGGCAAATGTTTCAATTCCTTATAGGTAGGCTAAAAACCTGCATCATCATAAGGTGTTTCGAGCGGAAAATCGGTGTTTCAATTCCTTATAGGTAGGCTAAAAACAAGACGCAGCTTGACAGAGGTAACTGTTGGCTGGGGGTTTCAATTCCTTATAGGTAGGCTAAAAACGTAACGGGAGGTAGATAGCATGGCAATGATACAAATGTTTCAATTCCTTATAGGTAGGCTAAAAACGCGACCCTGCATTACAGGCTGGTGACTACATCAACCGTTTCAATTCCTTATAGGTAGGCTAAAAACGATTATTCATGAATGGAAGCCAGGGGTAAACATATCGTTTCAATTCCTTATAGGTAGGCTAAAAACACGACCCATCGGCGCTTATAAAAATTGGCTGGAAAGAGTTTCAATTCCTTATAGGTAGGCTAAAAACCTTCAGGAATCCAATCATGAATTCCTGTGGAACCCCAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTAGCTATTGGTATAGCTAAACCGTCTATATGTCCTCTGTTTCAATTCCTTATAGGTAGGCTAAAAACTGTCAAGTGGAAGCCTTAAAACATATTACAATTCCATGTTTCAATTCCTTATAGGTAGGCTAAAAACACCGCTGCCGGTGGATGAATATACAACGTTGAAGAGTTTCAATTCCTTATAGGTAGGCTAAAAACGCAATAAATGCTATTCAAGCTGTGCTTCCCTTAGCTGGTTTCAATTCCTTATAGGTAGGCTAAAAACGTACACCAGAAAACAAAGTAGCCCAATCTAACTGCAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTTCTACCGAATCAACTTTTATTTGTTTTTTCATTTGTTTCAATTCCTTATAGGTAGGCTAAAAACTGAAGTAGAAGGCGCGAATACGCTAATGGTGCCGGGGTTTCAATTCCTTATAGGTAGGCTAAAAACTACAGTTGGCGGTGTTACGGTAAATTTCAAGCCTGAGTTTCAATTCCTTATAGGTAGGCTAAAAACGCCCAATGCGCAGCCGAATATGGCCACAGGTGGCAGTTTCAATTCCTTATAGGTAGGCTAAAAACCTGCTGCTGCATCGGTTGCAGATGTGCCCGGGAGGGGTTTCAATTCCTTATAGGTAGGCTAAAAACGCGTACAGGCACAGCAGACAAAATCTGTATCCGCAGGTTTCAATTCCTTATAGGTAGGCTAAAAACTTTACCATGTTGGTTTTACGCTCAATCTCGGTTACGGTTTCAATTCCTTATAGGTAGGCTAAAAACTCACAAATTATGTCATCGAGGATATACCGCTCAACGAGTTTCAATTCCTTATAGGTAGGCTAAAAACATTCCGCTACTATATTTGCTAATTCTTCTTTTGTTAGTTTCAATTCCTTATAGGTAGGCTAAAAACTGATAGCACAATGGAATTTGGCACCGCTGTTCAAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCTTTATATCCCAGCATTTTTGCCATTTGTTCTTGTGGTTTCAATTCCTTATAGGTAGGCTAAAAACTATGAAGAATGGGAAGGAGGTACAATCACATGAACAGTTTCAATTCCTTATAGGTAGGCTAAAAACGCAAAAGAAGCCGGGTTTTTTGGAGGTGAAGTAGGTTTCAATTCCTTATAGGTAGGCTAAAAACCTGGTTTCCATACAGAACTTCAATCTGCTGTTGTATTGTTTCAATTCCTTATAGGTAGGCTAAAAACCCTTCCCATTCTTCATATCTCTTAAAAACTGTTCCCCGTTTCAATTCCTTATAGGTAGGCTAAAAACAATTGTTTTTCTTCTTTTGTAAGTTCAAGTTCAAGCCGTTTCAATTCCTTATAGGTAGGCTAAAAACGTAATTGTGGTTTTGATAGAAGTAATCACCTACCGGGTTTCAATTCCTTATAGGTAGGCTAAAAACTAGAAAACTTACACCTGAAGAAATTGAAGAAACCGTGTTTCAATTCCTTATAGGTAGGCTAAAAACCTGGTCAATTCTTCAAAATTGGTTCCACTTGGATATGTTTCAATTCCTTATAGGTAGGCTAAAAACAAAACAAAGATGAATATATTAGCATAGAAAAATTGTGTTTCAATTCCTTATAGGTAGGCTAAAAACATGAATTGTTTATTACCCTCACTTATAAAGAAAATAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTATTTATGAAATTCTATTTGTTCTAAGTACTGCCCAGTTTCAATTCCTTATAGGTAGGCTAAAAACGTATTGAAAGTAGATTTGGAAAGATGCATAGGCAAATGTTTCAATTCCTTATAGGTAGGCTAAAAACCAATAATTTTTGGAAAAGAAGCTGCAACAGTTCCTTAGTTTCAATTCCTTATAGGTAGGCTAAAAACGGTGTTCAGGATACATCAAGAAGCGGTTTATATCAGTTTCAATTCCTTATAGGTAGGCTAAAAACGAAAAAAGAATCTAATCAATTAACAGTTATGTATTAGTTTCAATTCCTTATAGGTAGGCTAAAAACAAAGTTATTGCTTCCATATCAAGCACTTTTGAAATTGTTTCAATTCCTTATAGGTAGGCTAAAAACGGAATATGAAAATGCAGGATTGCACTTTGAACCAAGGTTTCAATTCCTTATAGGTAGGCTAAAAACCCTGTGGCGGTTGGCGAAGGCTTCAGAGATGGCACAAGTTTCAATTCCTTATAGGTAGGCTAAAAACGCAAGCCTTAAATTATCTAAATCATAAATCTTTTTGTAGTTTCAATTCCTTATAGGTAGGCTAAAAACTGGAAGTGCAACAGCCGAATTCACTGGACATACTACGTTTCAATTCCTTATAGGTAGGCTAAAAACCATTGGACGCGATAGAGTCATTGATGAAGTATGTGCGTTTCAATTCCTTATAGGTAGGCTAAAAACGAATTGCCCATTGGCATATTCTATCAGGGAAATATGGGTTTCAATTCCTTATAGGTAGGCTAAAAACTGAGAAAGGATGTGGATGTGATGGCTATTATCTATGGTTTCAATTCCTTATAGGTAGGCTAAAAACATTTTTAAAAGTTTTTGTAGAAGTTCTTGCGGCAACTCGTTTCAATTCCTTATAGGTAGGCTAAAAACAATGTGGCAAAAGGCTAATCCCGGTCTTGGTACAATGTTTCAATTCCTTATAGGTAGGCTAAAAACCACACTTTTTCATGATATAATGTAGATGGAATTATAGTTTCAATTCCTTATAGGTAGGCTAAAAACCCACCCTGTATAAATAATCTGAGAACACATAAAATAGTTTCAATTCCTTATAGGTAGGCTAAAAACATTATGGGCCCTTGCTAGTATTAAGAAGACAAAAGTGTTTCAATTCCTTATAGGTAGGCTAAAAACGATGATATATGCCAGGAGCAGAATTAGCGCAATATGGAAGTTTCAATTCCTTATAGGTAGGCTAAAAACGAAGCAAAACATGGCATAGTAGGTTTTGCATTATTTAGTTTCAATTCCTTATAGGTAGGCTAAAAACATATTTTTGAAATGGGGGTATAATTATGGCACTATTGTTTCAATTCCTTATAGGTAGGCTAAAAACGAAGTATGGCGTTAGTAAAACGCATATTTCCAGAAGCGTTTCAATTCCTTATAGGTAGGCTAAAAACCTCGAAAATTATATATTCTTTCATTCGTCTATGCCCGTTTCAATTCCTTATAGGTAGGCTAAAAACAAAAATTTATGGAGAAATACCAATTAGAAGATTTAGAGTTTCAATTCCTTATAGGTAGGCTAAAAACTAGCTGCTCTGGATGCAAAGGCAGATTATATACCGCTGTTTCAATTCCTTATAGGTAGGCTAAAAACATTAAGAGAGCGGGCTAAATGCCCGCCCGCTAACTTGTTTCAATTCCTTATAGGTAGGCTAAAAACCTTTTCAAAAAACATATACATATCTTCTGCTGCTTTGTTTCAATTCCTTATAGGTAGGCTAAAAACTTCATTATCAGAACCCTCAAAATTAGCATTAATCAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACAAGAGCAGCAAAAAAGGAGAGTTTATCTCTCCCTGGTTTCAATTCCTTATAGGTAGGCTAAAAACTTTCTGACCTCTTTTTCAAGAAGTAACCTAACAAGCGTTTCAATTCCTTATAGGTAGGCTAAAAACGCACCACACATATTACAAGTAGCCGACACAACAAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTGCTACTTTTTTAACATACGATGTTGTACAGAGGTGTTTCAATTCCTTATAGGTAGGCTAAAAACATAATGCAAAACCTACTATGCCATGTTTTGCTTCTAAGTTTCAATTCCTTATAGGTAGGCTAAAAACGAAAAGTTGCGTTGGCAAATGCATTTGTGAAATTGATGTTTCAATTCCTTATAGGTAGGCTAAAAACCTAAATTAACGAAAGACGATTCAACAGGAGTAACATAGTTTCAATTCCTTATAGGTAGGCTAAAAACTATAGATGAGCAATCTGAGAGACATACGAACAAAGTGTTTCAATTCCTTATAGGTAGGCTAAAAACGAATATCTTTAGTCGCTCGTGCTTGTCAGGTGTCATTTGTTTCAATTCCTTATAGGTAGGCTAAAAACCTGCAATGAAGGCTAAAGACAGTGTGCTGAAGTTCTGTTTCAATTCCTTATAGGTAGGCTAAAAACTTGGCAAGCTGGAAGATTATAGCCTGGAGAATTTCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACATGAATTGCCCAACGTCTGCCATATGCAGCATTACCTAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTGTTCCAATTTGACCAAAGGTCATTGGCATTTCTCGTTTCAATTCCTTATAGGTAGGCTAAAAACGATATCAGGTGGGTTACATACTGATGTCTTGGGTCGGGTTTCAATTCCTTATAGGTAGGCTAAAAACGGATACAGTCTGGTAGCCAACTCCTCGGTGGATATCTCGTTTCAATTCCTTATAGGTAGGCTAAAAACGTACCTTACCGTCATCTGCCTTCACCTACTTCCTTCGTTTCAATTCCTTATAGGTAGGCTAAAAACTGCCATAATATACGGTTTCATTGTTTGCCAGAACTAGTTTCAATTCCTTATAGGTAGGCTAAAAACGGTGTAAAGAGTGGTAATGTTAGTGAGTCATTGACCAGTTTCAATTCCTTATAGGTAGGCTAAAAACGATACCATTACATCCATGCATATCTTCTTGTCAATGGTTTCAATTCCTTATAGGTAGGCTAAAAACTCAGATTGATAGTGAAAAGAAGGAGGATAGTTAATAGTTTCAATTCCTTATAGGTAGGCTAAAAACACGTCAAGGATGGTTGCCTTGCTAATAGAAGCTGTGTTTCAATTCCTTATAGGTAGGCTAAAAACTTCTAAAATCTCCTTTCTGTAACTTTCTAATTATATTGGTTTCAATTCCTTATAGGTAGGCTAAAAACGCCACAACAAACCTATCAGGAACAGCAGAAATCTTCCGTTTCAATTCCTTATAGGTAGGCTAAAAACTAGGTTTTGTATTGTTTGTAATACTGTTAGAACTGTGTTTCAATTCCTTATAGGTAGGCTAAAAACGCAACAGGATCGAAAGCATAAGAAACACTAGCAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCCTGATTTTGCTTGTCGTTAACATGGTTAAAGGGAGGGTTTCAATTCCTTATAGGTAGGCTAAAAACCTCATAACCTTATAGGCATAAGTGCTGAATGTAAACCCGTTTCAATTCCTTATAGGTAGGCTAAAAACTGATTTCAACCACGAGGAATTCCATAGGCATTACTGGTTTCAATTCCTTATAGGTAGGCTAAAAACTTGATGTTTGGGAAGGTCTCCATCATGTATCTCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACTACCACCCAGAGTTTGCACAAGGGGAAGGAGGGTTAGGTTTCAATTCCTTATAGGTAGGCTAAAAACTGTGGAACCCTATCCAGTATAACCCAGGTTGTAGAGGTTTCAATTCCTTATAGGTAGGCTAAAAACGGTTAAGGAAATGCAAGAATACGGCTTTGAGATGAGTTTCAATTCCTTATAGGTAGGCTAAAAACCTATTTCCTGGTGGTTGCAGACATGGTGCAATGGGCGTTTCAATTCCTTATAGGTAGGCTAAAAACTTCTTGATTGCTTCAAGTGCCTTGTTGAAAATCTGCTGTTTCAATTCCTTATAGGTAGGCTAAAAACGTGCTGTCTCTGACTTACCTGTTCTGGTGTCTCCTAGTTTCAATTCCTTATAGGTAGGCTAAAAACGTTGGGGCATAAGGCTATAGCTATCACCGAACATGGGTTTCAATTCCTTATAGGTAGGCTAAAAACAACCACCAAAAGTTCCTAAAAAAGAAGCTGGCTATTAGTTTCAATTCCTTATAGGTAGGCTAAAAACGGAAGGTTCAATGAACATGTTGCCTTCAATTTCTGCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACTCAGTGAAGATGGACGAGAACGGGAATATTAGACCTGTGTTTCAATTCCTTATAGGTAGGCTAAAAACACGTCCCCGGCTGAGACTGGGGTACCGCCTTCTGTAGGTTTCAATTCCTTATAGGTAGGCTAAAAACCAGCAGGAATAAGAGAGGTGAGTGAGCTAAATGAAGTTTCAATTCCTTATAGGTAGGCTAAAAACATGTCTGTGCCTACCGTGGAAGGACAGGGAGAAGTGTTTCAATTCCTTATAGGTAGGCTAAAAACTGGCTATACGCACGGTGTTCCTCACTGCTTCTACAGGGTTTCAATTCCTTATAGGTAGGCTAAAAACTGAGACTCTCAAGCCTTATATGACCATAGAAAAACAGTTTCAATTCCTTATAGGTAGGCTAAAAACTACTTACCTGTCCACTGATTGCTCCAGTTATTTCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCCCTACCTGTCCAGGTGGTTGTTTCTGAAGACTCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACGAAGGCAGGAAGGCAAGTGTGATGGAGACTTGGATGTTTCAATTCCTTATAGGTAGGCTAAAAACTTTGGCACCTATCTCTTCAGCTTTTTCATTCCAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCACCTATATTACCTCCTTATACTCTGGATATACCAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACTCAGATTGATAGTGAAAAGAAGGAGGATAGTTAATAGTTTCAATTCCTTATAGGTAGGCTAAAAACACGTCAAGGATGGTTGCCTTGCTAATAGAAGCTGTGTTTCAATTCCTTATAGGTAGGCTAAAAACAGTAAAAGAATTGGAAGGAGGCATAACAATGGACAAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCATGTGTTATAGCGGAAGGATTGATGTTTGATGAAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTGCGTCACACACGACGCAGACAAGAAGAGAATTATTAGTTTCAATTCCTTATAGGTAGGCTAAAAACATGATGAGATTAGAAAGTTTGTGAAAGAAAATTGGGTTTCAATTCCTTATAGGTAGGCTAAAAACAAATGCTAAATGACATAAAAATTGTACAATAAGGGAGGGTTTCAATTCCTTATAGGTAGGCTAAAAACGAGGAGAATGAGAAACTTGTAGAAGAAAACAAACGGTGTTTCAATTCCTTATAGGTAGGCTAAAAACACAAAAATACGTCGCCTTGTAAATGCGGGGCAGGAATGTTTCAATTCCTTATAGGTAGGCTAAAAACATGAAAACAGGCAGAACGAAATAGCAAAAATATCTCGGTTTCAATTCCTTATAGGTAGGCTAAAAACCCATTCTTCCCATTCTTCCCATTCTTTCTGTCTTTTGTTTCAATTCCTTATAGGTAGGCTAAAAACGAGAAAAAAGCAAGAAAAAGCGGAGTTGCGTAGCGATTGTTTCAATTCCTTATAGGTAGGCTAAAAACCAGATACGTTAAAAGCAAGTGCCAATTTACTAACGTGTTTCAATTCCTTATAGGTAGGCTAAAAACTTGTCCCTCTATATGCACCTGCTGATTACTTGAAATGTTTCAATTCCTTATAGGTAGGCTAAAAACATAAAGAATTTATTGGGGAATATTGCCCAGGTTATGTGTTTCAATTCCTTATAGGTAGGCTAAAAACGAGGTAGGAAAAGAAAAGGTAAGATACTTATCCCAGGTTTCAATTCCTTATAGGTAGGCTAAAAACATACGTCCAGGCTGTATTTCCAAGAAAGAAATCCCTGGTTTCAATTCCTTATAGGTAGGCTAAAAACCAAAAAAGCGGGCTTTAATAGACGCTACTCTTCTTGGTTTCAATTCCTTATAGGTAGGCTAAAAACCAGCAAATTCTTTATCATAGTTTATATGTTCAACGGTTTCAATTCCTTATAGGTAGGCTAAAAACTATGGTTAAAATGTATTCGTCTGCAAATTTATCTATAGTTTCAATTCCTTATAGGTAGGCTAAAAACGTAAAAGAAGCACTACATGAAGGGATGATACAAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACAAGAAGTGGACTTAAATCATGTTAAAAATACAATGGTTTCAATTCCTTATAGGTAGGCTAAAAACTACATTTACGTAAAGATGATGAAATTGAAATATACATGTTTCAATTCCTTATAGGTAGGCTAAAAACGCACTTTCTGATATACCTAAAACCTGTGCAGTTTCTTGTTTCAATTCCTTATAGGTAGGCTAAAAACTCAATAGAACAGCGATTAGAAGGAGGGATAGTACAGGTTTCAATTCCTTATAGGTAGGCTAAAAACACCAACCTTACTGAAGCCCGGTGCTGAAAAAATTTTAAGTTTCAATTCCTTATAGGTAGGCTAAAAACGTGGAAAGTTGGCAGGTGCATAGCCAGTCATATGGGGTTTCAATTCCTTATAGGTAGGCTAAAAACACAGTGTGGATACCCTGCTGGCACCGTTCGTAAGAATGTTTCAATTCCTTATAGGTAGGCTAAAAACAATCACTTAGCGTTCTGATATAATGAAGTAGGATGGGTTTCAATTCCTTATAGGTAGGCTAAAAACTCTTCGGCTATCCCCCATCCATACCCCTCAATGTACAGTTTCAATTCCTTATAGGTAGGCTAAAAACCTGCTTTGTGTAATTGCTTCATAGATTCCATATTCATGTTTCAATTCCTTATAGGTAGGCTAAAAACTTTTAAGAGAAGCTTCAATCATTGAGGAAGTAGACTGTTTCAATTCCTTATAGGTAGGCTAAAAACGATTAATGAACATGGACAAAAAAGCAAAAGAAAAAGTGTTTCAATTCCTTATAGGTAGGCTAAAAACCGAATTTGATGCCCGTTCCAATTTTCAATCTTTATGTTTCAATTCCTTATAGGTAGGCTAAAAACCATCAAAACTAACCCATGGCGTTGTTACGCATACTGGGTTTCAATTCCTTATAGGTAGGCTAAAAACTCCATATATCTTCTGTTTTCCAATCATAAATTGGAGTTTCAATTCCTTATAGGTAGGCTAAAAACCAAAAGCTTGTCATTCAATCAAACAAAAAATCAATAGTTTCAATTCCTTATAGGTAGGCTAAAAACTCTTTTAGATTGTTTGATATAAAATTAATTGCTCCTTTGTTTCAATTCCTTATAGGTAGGCTAAAAACGGTATTACTCAATCCTCTTTGGGGAGCAGTAGGAGCAGGTTTCAATTCCTTATAGGTAGGCTAAAAACTTTCATGAATAGATTTCCCTTGCATGTACATTAAGTCAGTTTCAATTCCTTATAGGTAGGCTAAAAACCATCCACAACAATATATCTATCATTTTGTTCATCAGTTTCAATTCCTTATAGGTAGGCTAAAAACAATAATAGAAAGAGGTTCAGGATTGACAGTTCATATAGTTTCAATTCCTTATAGGTAGGCTAAAAACAGAAATTAGATGCAATTGGTAATGAAAATTCATAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACCCTGGATATGGGGCTTGGTAAAACCTTTGTTGGAAGGTTTCAATTCCTTATAGGTAGGCTAAAAACCCTGAAAGCAGTGATTTATTTGAACAAAGCAAGAAACGTTTCAATTCCTTATAGGTAGGCTAAAAACGAAAGATGAAGATTTATATTCTTTCAGGAAGCGGTGTTTCAATTCCTTATATGTAGGCTAAAAACATGACTTTAAGTTCTTTTGCTGTAATACCTTTCTTCGTTTCAATTCCTTATAGGTAGGCTAAAAACCCAATTTCCTCACACTTCAACTTATATGGAAAGGAAGGTTTCAATTCCTTATAGGTAGGCTAAAAACAAATTGCAAACTTATCAAATAAAAAGGTTGTTCCTTGTTTCAATTCCTTATAGGTAGGCTAAAAACAAAAAATTTCTTTAATGTCAATATTTAGTATTTCACGTTTCAATTCCTTATAGGTAGGCTAAAAACCAGCAATTATCGGAGAATATATCGTATACCCATCAAGTTTCAATTCCTTATAGGTAGGCTAAAAACGGCTTGCCGTTATTTTGCCAACAATGTTGGCAGCAGGGTTTCAATTCCTTATAGGTAGGCTAAAAACAAAGTAAATATATTTTGATTCGGGTAAACGGCATGGAGTTTCAATTCCTTATAGGTAGGCTAAAAACCTTCTGCCACTTCTTTTTCCTTTACAAGCTTTTGGAGTTTCAATTCCTTATAGGTAGGCTAAAAACATGTATCCAGTGACGCAAGATTTTTTAGAGAAGAGTTTCAATTCCTTATAGGTAGGCTAAAAACTCTAAAGACAGTTCTTTTACTTCTTCTAACAGCACTCGTTTCAATTCCTTATAGGTAGGCTAAAAACCACATACGTGTTTTGGGTGTTTCTTTATTTCGTGCTACGTTTCAATTCCTTATAGGTAGGCTAAAAACTGCAAAAAAAGCTGGTTTAAGTCATTCCTATATAAAGTTTCAATTCCTTATAGGTAGGCTAAAAACGATGAAGGACCTCACAAGTGCGGAAGGGCTGGCTTTCTTGTTTCAATTCCTTATAGGTAGGCTAAAAACCATTAGGTACAGAGGTAGAAAAAATGTTCAATACTTAGTTTCAATTCCTTATAGGTAGGCTAAAAACTTTAAAATCGTATAAAGAGCTTATTGAGCTGTATTTGTTTCAATTCCTTATAGGTAGGCTAAAAAC

>NC_014538|5|4|2348597-2362246|CRISPRCasFinder
CACTATTTTCAGGATAGGTAGGCTAAAAAC	CTTTTCTGACCACCAAAAACCTATGTGGCTGTTCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATTCTACTGCATTATTACATCTTGTGCTACATCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGCAGGTTTTATGTCAAGCCTATCAAGCACGTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAGCCTCAGCTAATCTCTGTTGAAACTCCTCACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACATTGAAAGATGGCACGGTTATTAAAATAGACGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCAAAGCGTATTTACATTTTAGCAGATGTGGATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCCACGTTCAGGGGCTCTTCTTTTCATTTCTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAACGTCTATGTCTATGCTTGCGTGCGGCAGATTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACCCACCAAACCAACAGGTGAGATTGTTCCACGATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGTGCCTATTTCAGACTCAAAACCACCATTTGCCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAAGCCCAGTAGGGCTTTTATTTTTGCGCAGAAAGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAATAAAGAGCTGTTTGAGATGCTACAACAAATTAGGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGCTCCGACGTGCCATAACTGCTATAGCAGATACGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTTGTGAAACTGCCGGAGGATATTGGTGAAGAAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCGAGTTCAATACCTTCACCCACCAAACCAACAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGTAGACGTATATGTCGCCGCCAGCACCAGCAACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCTGCTCTTCTTTTTGAAACTTTTTAGCTTCTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAAGTATCCGCACCAATATCTTTTGTGCTGCAAATAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAAATTGAAACGAAAGGAGGTATGCTTATGAGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGGTTTTAAAGTACACTACAGGGTTGGTGGTGGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGTCGCCGTTATTAGCTTTGCAAAAGGCTATATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTAATGAAGGATTACTGCGCCCATTCTCAATATCACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTACTGTGAATTAGCACAAAGAGAGGAGGCAGCGATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCCCAATTTTGGGGATTTATTAAATCCTCTAATAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAGTAAATCTTTTTTAGTGACTTTGTACTTTTTAGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTCACATTCAACCCAATATCAGCTTTACATTGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATTATCAAGTTATCTTCCTTTGCACTCTAAATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATCGGATTCCTACGTAAAAATTACAAAGGTTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGGTATGAAATCTCCGTATTCTGCAAACTCGTCTTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATTGTTTTTCTTCTTTTGTAAGTTCAAGTTCAAGCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCATAAACAAAGCAGAAGTAGTACCAAGCCCTTACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATGTTTGTTTTGACAAACTCAATTACTTTCTTTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGATGAATTAGGCCGAATACTTCGACCTGTCGTTGGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATTGAAAGTAGATTTGGAAAGATGCATAGGCAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCATCATCATAAGGTGTTTCGAGCGGAAAATCGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGACGCAGCTTGACAGAGGTAACTGTTGGCTGGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAACGGGAGGTAGATAGCATGGCAATGATACAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGACCCTGCATTACAGGCTGGTGACTACATCAACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATTATTCATGAATGGAAGCCAGGGGTAAACATATC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGACCCATCGGCGCTTATAAAAATTGGCTGGAAAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTCAGGAATCCAATCATGAATTCCTGTGGAACCCCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAGCTATTGGTATAGCTAAACCGTCTATATGTCCTCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGTCAAGTGGAAGCCTTAAAACATATTACAATTCCAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACCGCTGCCGGTGGATGAATATACAACGTTGAAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAATAAATGCTATTCAAGCTGTGCTTCCCTTAGCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTACACCAGAAAACAAAGTAGCCCAATCTAACTGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTCTACCGAATCAACTTTTATTTGTTTTTTCATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGAAGTAGAAGGCGCGAATACGCTAATGGTGCCGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACAGTTGGCGGTGTTACGGTAAATTTCAAGCCTGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCCCAATGCGCAGCCGAATATGGCCACAGGTGGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCTGCTGCATCGGTTGCAGATGTGCCCGGGAGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGTACAGGCACAGCAGACAAAATCTGTATCCGCAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTACCATGTTGGTTTTACGCTCAATCTCGGTTACG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCACAAATTATGTCATCGAGGATATACCGCTCAACGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTCCGCTACTATATTTGCTAATTCTTCTTTTGTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGATAGCACAATGGAATTTGGCACCGCTGTTCAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTTATATCCCAGCATTTTTGCCATTTGTTCTTGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATGAAGAATGGGAAGGAGGTACAATCACATGAACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAAAAGAAGCCGGGTTTTTTGGAGGTGAAGTAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGGTTTCCATACAGAACTTCAATCTGCTGTTGTATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTTCCCATTCTTCATATCTCTTAAAAACTGTTCCCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATTGTTTTTCTTCTTTTGTAAGTTCAAGTTCAAGCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAATTGTGGTTTTGATAGAAGTAATCACCTACCGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGAAAACTTACACCTGAAGAAATTGAAGAAACCGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGGTCAATTCTTCAAAATTGGTTCCACTTGGATAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAACAAAGATGAATATATTAGCATAGAAAAATTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGAATTGTTTATTACCCTCACTTATAAAGAAAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTATTTATGAAATTCTATTTGTTCTAAGTACTGCCCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTATTGAAAGTAGATTTGGAAAGATGCATAGGCAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAATAATTTTTGGAAAAGAAGCTGCAACAGTTCCTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTGTTCAGGATACATCAAGAAGCGGTTTATATCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAAAAGAATCTAATCAATTAACAGTTATGTATTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGTTATTGCTTCCATATCAAGCACTTTTGAAATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAATATGAAAATGCAGGATTGCACTTTGAACCAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGTGGCGGTTGGCGAAGGCTTCAGAGATGGCACAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAAGCCTTAAATTATCTAAATCATAAATCTTTTTGTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGGAAGTGCAACAGCCGAATTCACTGGACATACTAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATTGGACGCGATAGAGTCATTGATGAAGTATGTGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAATTGCCCATTGGCATATTCTATCAGGGAAATATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGAGAAAGGATGTGGATGTGATGGCTATTATCTATG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTTTTAAAAGTTTTTGTAGAAGTTCTTGCGGCAACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATGTGGCAAAAGGCTAATCCCGGTCTTGGTACAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACACTTTTTCATGATATAATGTAGATGGAATTATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCACCCTGTATAAATAATCTGAGAACACATAAAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTATGGGCCCTTGCTAGTATTAAGAAGACAAAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATGATATATGCCAGGAGCAGAATTAGCGCAATATGGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGCAAAACATGGCATAGTAGGTTTTGCATTATTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATATTTTTGAAATGGGGGTATAATTATGGCACTATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGTATGGCGTTAGTAAAACGCATATTTCCAGAAGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTCGAAAATTATATATTCTTTCATTCGTCTATGCCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAAATTTATGGAGAAATACCAATTAGAAGATTTAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGCTGCTCTGGATGCAAAGGCAGATTATATACCGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTAAGAGAGCGGGCTAAATGCCCGCCCGCTAACTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTTTCAAAAAACATATACATATCTTCTGCTGCTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCATTATCAGAACCCTCAAAATTAGCATTAATCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGAGCAGCAAAAAAGGAGAGTTTATCTCTCCCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTCTGACCTCTTTTTCAAGAAGTAACCTAACAAGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCACCACACATATTACAAGTAGCCGACACAACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCTACTTTTTTAACATACGATGTTGTACAGAGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATAATGCAAAACCTACTATGCCATGTTTTGCTTCTAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAAGTTGCGTTGGCAAATGCATTTGTGAAATTGAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTAAATTAACGAAAGACGATTCAACAGGAGTAACATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATAGATGAGCAATCTGAGAGACATACGAACAAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAATATCTTTAGTCGCTCGTGCTTGTCAGGTGTCATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCAATGAAGGCTAAAGACAGTGTGCTGAAGTTCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGGCAAGCTGGAAGATTATAGCCTGGAGAATTTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGAATTGCCCAACGTCTGCCATATGCAGCATTACCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGTTCCAATTTGACCAAAGGTCATTGGCATTTCTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATATCAGGTGGGTTACATACTGATGTCTTGGGTCGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGATACAGTCTGGTAGCCAACTCCTCGGTGGATATCTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTACCTTACCGTCATCTGCCTTCACCTACTTCCTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGCCATAATATACGGTTTCATTGTTTGCCAGAACTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTGTAAAGAGTGGTAATGTTAGTGAGTCATTGACCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATACCATTACATCCATGCATATCTTCTTGTCAATG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGATTGATAGTGAAAAGAAGGAGGATAGTTAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGTCAAGGATGGTTGCCTTGCTAATAGAAGCTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTAAAATCTCCTTTCTGTAACTTTCTAATTATATTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCCACAACAAACCTATCAGGAACAGCAGAAATCTTCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGGTTTTGTATTGTTTGTAATACTGTTAGAACTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAACAGGATCGAAAGCATAAGAAACACTAGCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGATTTTGCTTGTCGTTAACATGGTTAAAGGGAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTCATAACCTTATAGGCATAAGTGCTGAATGTAAACCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGATTTCAACCACGAGGAATTCCATAGGCATTACTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGATGTTTGGGAAGGTCTCCATCATGTATCTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACCACCCAGAGTTTGCACAAGGGGAAGGAGGGTTAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGTGGAACCCTATCCAGTATAACCCAGGTTGTAGAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTTAAGGAAATGCAAGAATACGGCTTTGAGATGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTATTTCCTGGTGGTTGCAGACATGGTGCAATGGGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTTGATTGCTTCAAGTGCCTTGTTGAAAATCTGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTGCTGTCTCTGACTTACCTGTTCTGGTGTCTCCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTTGGGGCATAAGGCTATAGCTATCACCGAACATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AACCACCAAAAGTTCCTAAAAAAGAAGCTGGCTATTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAAGGTTCAATGAACATGTTGCCTTCAATTTCTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGTGAAGATGGACGAGAACGGGAATATTAGACCTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGTCCCCGGCTGAGACTGGGGTACCGCCTTCTGTAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCAGGAATAAGAGAGGTGAGTGAGCTAAATGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGTCTGTGCCTACCGTGGAAGGACAGGGAGAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGGCTATACGCACGGTGTTCCTCACTGCTTCTACAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGAGACTCTCAAGCCTTATATGACCATAGAAAAACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACTTACCTGTCCACTGATTGCTCCAGTTATTTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCCTACCTGTCCAGGTGGTTGTTTCTGAAGACTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGGCAGGAAGGCAAGTGTGATGGAGACTTGGAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTGGCACCTATCTCTTCAGCTTTTTCATTCCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACCTATATTACCTCCTTATACTCTGGATATACCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGATTGATAGTGAAAAGAAGGAGGATAGTTAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGTCAAGGATGGTTGCCTTGCTAATAGAAGCTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AGTAAAAGAATTGGAAGGAGGCATAACAATGGACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATGTGTTATAGCGGAAGGATTGATGTTTGATGAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCGTCACACACGACGCAGACAAGAAGAGAATTATTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGATGAGATTAGAAAGTTTGTGAAAGAAAATTGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATGCTAAATGACATAAAAATTGTACAATAAGGGAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAGGAGAATGAGAAACTTGTAGAAGAAAACAAACGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAAAAATACGTCGCCTTGTAAATGCGGGGCAGGAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGAAAACAGGCAGAACGAAATAGCAAAAATATCTCG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATTCTTCCCATTCTTCCCATTCTTTCTGTCTTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAGAAAAAAGCAAGAAAAAGCGGAGTTGCGTAGCGATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGATACGTTAAAAGCAAGTGCCAATTTACTAACGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGTCCCTCTATATGCACCTGCTGATTACTTGAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATAAAGAATTTATTGGGGAATATTGCCCAGGTTATGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAGGTAGGAAAAGAAAAGGTAAGATACTTATCCCAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATACGTCCAGGCTGTATTTCCAAGAAAGAAATCCCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAAAAAGCGGGCTTTAATAGACGCTACTCTTCTTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCAAATTCTTTATCATAGTTTATATGTTCAACG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATGGTTAAAATGTATTCGTCTGCAAATTTATCTATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAAAAGAAGCACTACATGAAGGGATGATACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGAAGTGGACTTAAATCATGTTAAAAATACAATG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACATTTACGTAAAGATGATGAAATTGAAATATACAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCACTTTCTGATATACCTAAAACCTGTGCAGTTTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAATAGAACAGCGATTAGAAGGAGGGATAGTACAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACCAACCTTACTGAAGCCCGGTGCTGAAAAAATTTTAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTGGAAAGTTGGCAGGTGCATAGCCAGTCATATGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAGTGTGGATACCCTGCTGGCACCGTTCGTAAGAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATCACTTAGCGTTCTGATATAATGAAGTAGGATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTTCGGCTATCCCCCATCCATACCCCTCAATGTACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCTTTGTGTAATTGCTTCATAGATTCCATATTCAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTTAAGAGAAGCTTCAATCATTGAGGAAGTAGACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATTAATGAACATGGACAAAAAAGCAAAAGAAAAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CGAATTTGATGCCCGTTCCAATTTTCAATCTTTAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATCAAAACTAACCCATGGCGTTGTTACGCATACTGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCCATATATCTTCTGTTTTCCAATCATAAATTGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAAAGCTTGTCATTCAATCAAACAAAAAATCAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTTTTAGATTGTTTGATATAAAATTAATTGCTCCTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTATTACTCAATCCTCTTTGGGGAGCAGTAGGAGCAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTCATGAATAGATTTCCCTTGCATGTACATTAAGTCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATCCACAACAATATATCTATCATTTTGTTCATCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATAATAGAAAGAGGTTCAGGATTGACAGTTCATATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AGAAATTAGATGCAATTGGTAATGAAAATTCATAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGGATATGGGGCTTGGTAAAACCTTTGTTGGAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGAAAGCAGTGATTTATTTGAACAAAGCAAGAAAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAGATGAAGATTTATATTCTTTCAGGAAGCGGT
GTTTCAATTCCTTATATGTAGGCTAAAAAC	ATGACTTTAAGTTCTTTTGCTGTAATACCTTTCTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCAATTTCCTCACACTTCAACTTATATGGAAAGGAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATTGCAAACTTATCAAATAAAAAGGTTGTTCCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAAAATTTCTTTAATGTCAATATTTAGTATTTCAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCAATTATCGGAGAATATATCGTATACCCATCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGCTTGCCGTTATTTTGCCAACAATGTTGGCAGCAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGTAAATATATTTTGATTCGGGTAAACGGCATGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTCTGCCACTTCTTTTTCCTTTACAAGCTTTTGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGTATCCAGTGACGCAAGATTTTTTAGAGAAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTAAAGACAGTTCTTTTACTTCTTCTAACAGCACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACATACGTGTTTTGGGTGTTTCTTTATTTCGTGCTAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGCAAAAAAAGCTGGTTTAAGTCATTCCTATATAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATGAAGGACCTCACAAGTGCGGAAGGGCTGGCTTTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATTAGGTACAGAGGTAGAAAAAATGTTCAATACTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTAAAATCGTATAAAGAGCTTATTGAGCTGTATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC

>NC_014538|5|4|2348597-2362246|CRT
CACTATTTTCAGGATAGGTAGGCTAAAAAC	CTTTTCTGACCACCAAAAACCTATGTGGCTGTTCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATTCTACTGCATTATTACATCTTGTGCTACATCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGCAGGTTTTATGTCAAGCCTATCAAGCACGTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAGCCTCAGCTAATCTCTGTTGAAACTCCTCACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACATTGAAAGATGGCACGGTTATTAAAATAGACGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCAAAGCGTATTTACATTTTAGCAGATGTGGATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCCACGTTCAGGGGCTCTTCTTTTCATTTCTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAACGTCTATGTCTATGCTTGCGTGCGGCAGATTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACCCACCAAACCAACAGGTGAGATTGTTCCACGATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGTGCCTATTTCAGACTCAAAACCACCATTTGCCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAAGCCCAGTAGGGCTTTTATTTTTGCGCAGAAAGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAATAAAGAGCTGTTTGAGATGCTACAACAAATTAGGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGCTCCGACGTGCCATAACTGCTATAGCAGATACGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTTGTGAAACTGCCGGAGGATATTGGTGAAGAAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCGAGTTCAATACCTTCACCCACCAAACCAACAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGTAGACGTATATGTCGCCGCCAGCACCAGCAACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCTGCTCTTCTTTTTGAAACTTTTTAGCTTCTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAAGTATCCGCACCAATATCTTTTGTGCTGCAAATAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAAATTGAAACGAAAGGAGGTATGCTTATGAGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGGTTTTAAAGTACACTACAGGGTTGGTGGTGGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGTCGCCGTTATTAGCTTTGCAAAAGGCTATATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTAATGAAGGATTACTGCGCCCATTCTCAATATCACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTACTGTGAATTAGCACAAAGAGAGGAGGCAGCGATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCCCAATTTTGGGGATTTATTAAATCCTCTAATAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAGTAAATCTTTTTTAGTGACTTTGTACTTTTTAGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTCACATTCAACCCAATATCAGCTTTACATTGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATTATCAAGTTATCTTCCTTTGCACTCTAAATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATCGGATTCCTACGTAAAAATTACAAAGGTTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGGTATGAAATCTCCGTATTCTGCAAACTCGTCTTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATTGTTTTTCTTCTTTTGTAAGTTCAAGTTCAAGCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCATAAACAAAGCAGAAGTAGTACCAAGCCCTTACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATGTTTGTTTTGACAAACTCAATTACTTTCTTTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGATGAATTAGGCCGAATACTTCGACCTGTCGTTGGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATTGAAAGTAGATTTGGAAAGATGCATAGGCAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCATCATCATAAGGTGTTTCGAGCGGAAAATCGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGACGCAGCTTGACAGAGGTAACTGTTGGCTGGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAACGGGAGGTAGATAGCATGGCAATGATACAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGACCCTGCATTACAGGCTGGTGACTACATCAACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATTATTCATGAATGGAAGCCAGGGGTAAACATATC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGACCCATCGGCGCTTATAAAAATTGGCTGGAAAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTCAGGAATCCAATCATGAATTCCTGTGGAACCCCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAGCTATTGGTATAGCTAAACCGTCTATATGTCCTCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGTCAAGTGGAAGCCTTAAAACATATTACAATTCCAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACCGCTGCCGGTGGATGAATATACAACGTTGAAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAATAAATGCTATTCAAGCTGTGCTTCCCTTAGCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTACACCAGAAAACAAAGTAGCCCAATCTAACTGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTCTACCGAATCAACTTTTATTTGTTTTTTCATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGAAGTAGAAGGCGCGAATACGCTAATGGTGCCGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACAGTTGGCGGTGTTACGGTAAATTTCAAGCCTGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCCCAATGCGCAGCCGAATATGGCCACAGGTGGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCTGCTGCATCGGTTGCAGATGTGCCCGGGAGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGTACAGGCACAGCAGACAAAATCTGTATCCGCAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTACCATGTTGGTTTTACGCTCAATCTCGGTTACG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCACAAATTATGTCATCGAGGATATACCGCTCAACGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTCCGCTACTATATTTGCTAATTCTTCTTTTGTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGATAGCACAATGGAATTTGGCACCGCTGTTCAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTTATATCCCAGCATTTTTGCCATTTGTTCTTGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATGAAGAATGGGAAGGAGGTACAATCACATGAACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAAAAGAAGCCGGGTTTTTTGGAGGTGAAGTAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGGTTTCCATACAGAACTTCAATCTGCTGTTGTATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTTCCCATTCTTCATATCTCTTAAAAACTGTTCCCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATTGTTTTTCTTCTTTTGTAAGTTCAAGTTCAAGCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAATTGTGGTTTTGATAGAAGTAATCACCTACCGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGAAAACTTACACCTGAAGAAATTGAAGAAACCGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGGTCAATTCTTCAAAATTGGTTCCACTTGGATAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAACAAAGATGAATATATTAGCATAGAAAAATTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGAATTGTTTATTACCCTCACTTATAAAGAAAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTATTTATGAAATTCTATTTGTTCTAAGTACTGCCCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTATTGAAAGTAGATTTGGAAAGATGCATAGGCAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAATAATTTTTGGAAAAGAAGCTGCAACAGTTCCTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTGTTCAGGATACATCAAGAAGCGGTTTATATCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAAAAGAATCTAATCAATTAACAGTTATGTATTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGTTATTGCTTCCATATCAAGCACTTTTGAAATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAATATGAAAATGCAGGATTGCACTTTGAACCAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGTGGCGGTTGGCGAAGGCTTCAGAGATGGCACAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAAGCCTTAAATTATCTAAATCATAAATCTTTTTGTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGGAAGTGCAACAGCCGAATTCACTGGACATACTAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATTGGACGCGATAGAGTCATTGATGAAGTATGTGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAATTGCCCATTGGCATATTCTATCAGGGAAATATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGAGAAAGGATGTGGATGTGATGGCTATTATCTATG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTTTTAAAAGTTTTTGTAGAAGTTCTTGCGGCAACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATGTGGCAAAAGGCTAATCCCGGTCTTGGTACAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACACTTTTTCATGATATAATGTAGATGGAATTATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCACCCTGTATAAATAATCTGAGAACACATAAAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTATGGGCCCTTGCTAGTATTAAGAAGACAAAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATGATATATGCCAGGAGCAGAATTAGCGCAATATGGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGCAAAACATGGCATAGTAGGTTTTGCATTATTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATATTTTTGAAATGGGGGTATAATTATGGCACTATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGTATGGCGTTAGTAAAACGCATATTTCCAGAAGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTCGAAAATTATATATTCTTTCATTCGTCTATGCCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAAATTTATGGAGAAATACCAATTAGAAGATTTAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGCTGCTCTGGATGCAAAGGCAGATTATATACCGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTAAGAGAGCGGGCTAAATGCCCGCCCGCTAACTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTTTCAAAAAACATATACATATCTTCTGCTGCTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCATTATCAGAACCCTCAAAATTAGCATTAATCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGAGCAGCAAAAAAGGAGAGTTTATCTCTCCCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTCTGACCTCTTTTTCAAGAAGTAACCTAACAAGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCACCACACATATTACAAGTAGCCGACACAACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCTACTTTTTTAACATACGATGTTGTACAGAGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATAATGCAAAACCTACTATGCCATGTTTTGCTTCTAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAAGTTGCGTTGGCAAATGCATTTGTGAAATTGAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTAAATTAACGAAAGACGATTCAACAGGAGTAACATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATAGATGAGCAATCTGAGAGACATACGAACAAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAATATCTTTAGTCGCTCGTGCTTGTCAGGTGTCATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCAATGAAGGCTAAAGACAGTGTGCTGAAGTTCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGGCAAGCTGGAAGATTATAGCCTGGAGAATTTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGAATTGCCCAACGTCTGCCATATGCAGCATTACCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGTTCCAATTTGACCAAAGGTCATTGGCATTTCTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATATCAGGTGGGTTACATACTGATGTCTTGGGTCGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGATACAGTCTGGTAGCCAACTCCTCGGTGGATATCTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTACCTTACCGTCATCTGCCTTCACCTACTTCCTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGCCATAATATACGGTTTCATTGTTTGCCAGAACTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTGTAAAGAGTGGTAATGTTAGTGAGTCATTGACCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATACCATTACATCCATGCATATCTTCTTGTCAATG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGATTGATAGTGAAAAGAAGGAGGATAGTTAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGTCAAGGATGGTTGCCTTGCTAATAGAAGCTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTAAAATCTCCTTTCTGTAACTTTCTAATTATATTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCCACAACAAACCTATCAGGAACAGCAGAAATCTTCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGGTTTTGTATTGTTTGTAATACTGTTAGAACTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAACAGGATCGAAAGCATAAGAAACACTAGCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGATTTTGCTTGTCGTTAACATGGTTAAAGGGAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTCATAACCTTATAGGCATAAGTGCTGAATGTAAACCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGATTTCAACCACGAGGAATTCCATAGGCATTACTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGATGTTTGGGAAGGTCTCCATCATGTATCTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACCACCCAGAGTTTGCACAAGGGGAAGGAGGGTTAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGTGGAACCCTATCCAGTATAACCCAGGTTGTAGAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTTAAGGAAATGCAAGAATACGGCTTTGAGATGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTATTTCCTGGTGGTTGCAGACATGGTGCAATGGGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTTGATTGCTTCAAGTGCCTTGTTGAAAATCTGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTGCTGTCTCTGACTTACCTGTTCTGGTGTCTCCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTTGGGGCATAAGGCTATAGCTATCACCGAACATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AACCACCAAAAGTTCCTAAAAAAGAAGCTGGCTATTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAAGGTTCAATGAACATGTTGCCTTCAATTTCTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGTGAAGATGGACGAGAACGGGAATATTAGACCTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGTCCCCGGCTGAGACTGGGGTACCGCCTTCTGTAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCAGGAATAAGAGAGGTGAGTGAGCTAAATGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGTCTGTGCCTACCGTGGAAGGACAGGGAGAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGGCTATACGCACGGTGTTCCTCACTGCTTCTACAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGAGACTCTCAAGCCTTATATGACCATAGAAAAACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACTTACCTGTCCACTGATTGCTCCAGTTATTTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCCTACCTGTCCAGGTGGTTGTTTCTGAAGACTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGGCAGGAAGGCAAGTGTGATGGAGACTTGGAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTGGCACCTATCTCTTCAGCTTTTTCATTCCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACCTATATTACCTCCTTATACTCTGGATATACCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGATTGATAGTGAAAAGAAGGAGGATAGTTAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGTCAAGGATGGTTGCCTTGCTAATAGAAGCTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AGTAAAAGAATTGGAAGGAGGCATAACAATGGACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATGTGTTATAGCGGAAGGATTGATGTTTGATGAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCGTCACACACGACGCAGACAAGAAGAGAATTATTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGATGAGATTAGAAAGTTTGTGAAAGAAAATTGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATGCTAAATGACATAAAAATTGTACAATAAGGGAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAGGAGAATGAGAAACTTGTAGAAGAAAACAAACGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAAAAATACGTCGCCTTGTAAATGCGGGGCAGGAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGAAAACAGGCAGAACGAAATAGCAAAAATATCTCG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATTCTTCCCATTCTTCCCATTCTTTCTGTCTTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAGAAAAAAGCAAGAAAAAGCGGAGTTGCGTAGCGATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGATACGTTAAAAGCAAGTGCCAATTTACTAACGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGTCCCTCTATATGCACCTGCTGATTACTTGAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATAAAGAATTTATTGGGGAATATTGCCCAGGTTATGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAGGTAGGAAAAGAAAAGGTAAGATACTTATCCCAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATACGTCCAGGCTGTATTTCCAAGAAAGAAATCCCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAAAAAGCGGGCTTTAATAGACGCTACTCTTCTTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCAAATTCTTTATCATAGTTTATATGTTCAACG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATGGTTAAAATGTATTCGTCTGCAAATTTATCTATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAAAAGAAGCACTACATGAAGGGATGATACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGAAGTGGACTTAAATCATGTTAAAAATACAATG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACATTTACGTAAAGATGATGAAATTGAAATATACAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCACTTTCTGATATACCTAAAACCTGTGCAGTTTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAATAGAACAGCGATTAGAAGGAGGGATAGTACAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACCAACCTTACTGAAGCCCGGTGCTGAAAAAATTTTAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTGGAAAGTTGGCAGGTGCATAGCCAGTCATATGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAGTGTGGATACCCTGCTGGCACCGTTCGTAAGAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATCACTTAGCGTTCTGATATAATGAAGTAGGATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTTCGGCTATCCCCCATCCATACCCCTCAATGTACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCTTTGTGTAATTGCTTCATAGATTCCATATTCAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTTAAGAGAAGCTTCAATCATTGAGGAAGTAGACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATTAATGAACATGGACAAAAAAGCAAAAGAAAAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CGAATTTGATGCCCGTTCCAATTTTCAATCTTTAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATCAAAACTAACCCATGGCGTTGTTACGCATACTGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCCATATATCTTCTGTTTTCCAATCATAAATTGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAAAGCTTGTCATTCAATCAAACAAAAAATCAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTTTTAGATTGTTTGATATAAAATTAATTGCTCCTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTATTACTCAATCCTCTTTGGGGAGCAGTAGGAGCAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTCATGAATAGATTTCCCTTGCATGTACATTAAGTCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATCCACAACAATATATCTATCATTTTGTTCATCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATAATAGAAAGAGGTTCAGGATTGACAGTTCATATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AGAAATTAGATGCAATTGGTAATGAAAATTCATAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGGATATGGGGCTTGGTAAAACCTTTGTTGGAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGAAAGCAGTGATTTATTTGAACAAAGCAAGAAAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAGATGAAGATTTATATTCTTTCAGGAAGCGGT
GTTTCAATTCCTTATATGTAGGCTAAAAAC	ATGACTTTAAGTTCTTTTGCTGTAATACCTTTCTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCAATTTCCTCACACTTCAACTTATATGGAAAGGAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATTGCAAACTTATCAAATAAAAAGGTTGTTCCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAAAATTTCTTTAATGTCAATATTTAGTATTTCAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCAATTATCGGAGAATATATCGTATACCCATCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGCTTGCCGTTATTTTGCCAACAATGTTGGCAGCAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGTAAATATATTTTGATTCGGGTAAACGGCATGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTCTGCCACTTCTTTTTCCTTTACAAGCTTTTGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGTATCCAGTGACGCAAGATTTTTTAGAGAAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTAAAGACAGTTCTTTTACTTCTTCTAACAGCACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACATACGTGTTTTGGGTGTTTCTTTATTTCGTGCTAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGCAAAAAAAGCTGGTTTAAGTCATTCCTATATAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATGAAGGACCTCACAAGTGCGGAAGGGCTGGCTTTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATTAGGTACAGAGGTAGAAAAAATGTTCAATACTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTAAAATCGTATAAAGAGCTTATTGAGCTGTATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC

>NC_014538|5|5|2348663-2362246|PILER-CR
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATTCTACTGCATTATTACATCTTGTGCTACATCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGCAGGTTTTATGTCAAGCCTATCAAGCACGTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAGCCTCAGCTAATCTCTGTTGAAACTCCTCACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACATTGAAAGATGGCACGGTTATTAAAATAGACGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCAAAGCGTATTTACATTTTAGCAGATGTGGATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCCACGTTCAGGGGCTCTTCTTTTCATTTCTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAACGTCTATGTCTATGCTTGCGTGCGGCAGATTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACCCACCAAACCAACAGGTGAGATTGTTCCACGATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGTGCCTATTTCAGACTCAAAACCACCATTTGCCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAAGCCCAGTAGGGCTTTTATTTTTGCGCAGAAAGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAATAAAGAGCTGTTTGAGATGCTACAACAAATTAGGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGCTCCGACGTGCCATAACTGCTATAGCAGATACGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTTGTGAAACTGCCGGAGGATATTGGTGAAGAAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCGAGTTCAATACCTTCACCCACCAAACCAACAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGTAGACGTATATGTCGCCGCCAGCACCAGCAACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCTGCTCTTCTTTTTGAAACTTTTTAGCTTCTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAAGTATCCGCACCAATATCTTTTGTGCTGCAAATAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAAATTGAAACGAAAGGAGGTATGCTTATGAGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGGTTTTAAAGTACACTACAGGGTTGGTGGTGGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGTCGCCGTTATTAGCTTTGCAAAAGGCTATATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTAATGAAGGATTACTGCGCCCATTCTCAATATCACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTACTGTGAATTAGCACAAAGAGAGGAGGCAGCGATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCCCAATTTTGGGGATTTATTAAATCCTCTAATAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAGTAAATCTTTTTTAGTGACTTTGTACTTTTTAGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTCACATTCAACCCAATATCAGCTTTACATTGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATTATCAAGTTATCTTCCTTTGCACTCTAAATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATCGGATTCCTACGTAAAAATTACAAAGGTTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGGTATGAAATCTCCGTATTCTGCAAACTCGTCTTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATTGTTTTTCTTCTTTTGTAAGTTCAAGTTCAAGCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCATAAACAAAGCAGAAGTAGTACCAAGCCCTTACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATGTTTGTTTTGACAAACTCAATTACTTTCTTTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGATGAATTAGGCCGAATACTTCGACCTGTCGTTGGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATTGAAAGTAGATTTGGAAAGATGCATAGGCAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCATCATCATAAGGTGTTTCGAGCGGAAAATCGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGACGCAGCTTGACAGAGGTAACTGTTGGCTGGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAACGGGAGGTAGATAGCATGGCAATGATACAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGACCCTGCATTACAGGCTGGTGACTACATCAACC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATTATTCATGAATGGAAGCCAGGGGTAAACATATC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGACCCATCGGCGCTTATAAAAATTGGCTGGAAAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTCAGGAATCCAATCATGAATTCCTGTGGAACCCCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTAGCTATTGGTATAGCTAAACCGTCTATATGTCCTCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGTCAAGTGGAAGCCTTAAAACATATTACAATTCCAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACCGCTGCCGGTGGATGAATATACAACGTTGAAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAATAAATGCTATTCAAGCTGTGCTTCCCTTAGCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTACACCAGAAAACAAAGTAGCCCAATCTAACTGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTCTACCGAATCAACTTTTATTTGTTTTTTCATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGAAGTAGAAGGCGCGAATACGCTAATGGTGCCGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACAGTTGGCGGTGTTACGGTAAATTTCAAGCCTGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCCCAATGCGCAGCCGAATATGGCCACAGGTGGCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCTGCTGCATCGGTTGCAGATGTGCCCGGGAGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCGTACAGGCACAGCAGACAAAATCTGTATCCGCAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTACCATGTTGGTTTTACGCTCAATCTCGGTTACG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCACAAATTATGTCATCGAGGATATACCGCTCAACGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTCCGCTACTATATTTGCTAATTCTTCTTTTGTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGATAGCACAATGGAATTTGGCACCGCTGTTCAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTTATATCCCAGCATTTTTGCCATTTGTTCTTGTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATGAAGAATGGGAAGGAGGTACAATCACATGAACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAAAAGAAGCCGGGTTTTTTGGAGGTGAAGTAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGGTTTCCATACAGAACTTCAATCTGCTGTTGTATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTTCCCATTCTTCATATCTCTTAAAAACTGTTCCCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATTGTTTTTCTTCTTTTGTAAGTTCAAGTTCAAGCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAATTGTGGTTTTGATAGAAGTAATCACCTACCGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGAAAACTTACACCTGAAGAAATTGAAGAAACCGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGGTCAATTCTTCAAAATTGGTTCCACTTGGATAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAACAAAGATGAATATATTAGCATAGAAAAATTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGAATTGTTTATTACCCTCACTTATAAAGAAAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTATTTATGAAATTCTATTTGTTCTAAGTACTGCCCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTATTGAAAGTAGATTTGGAAAGATGCATAGGCAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAATAATTTTTGGAAAAGAAGCTGCAACAGTTCCTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTGTTCAGGATACATCAAGAAGCGGTTTATATCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAAAAGAATCTAATCAATTAACAGTTATGTATTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGTTATTGCTTCCATATCAAGCACTTTTGAAATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAATATGAAAATGCAGGATTGCACTTTGAACCAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGTGGCGGTTGGCGAAGGCTTCAGAGATGGCACAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAAGCCTTAAATTATCTAAATCATAAATCTTTTTGTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGGAAGTGCAACAGCCGAATTCACTGGACATACTAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATTGGACGCGATAGAGTCATTGATGAAGTATGTGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAATTGCCCATTGGCATATTCTATCAGGGAAATATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGAGAAAGGATGTGGATGTGATGGCTATTATCTATG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTTTTAAAAGTTTTTGTAGAAGTTCTTGCGGCAACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATGTGGCAAAAGGCTAATCCCGGTCTTGGTACAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACACTTTTTCATGATATAATGTAGATGGAATTATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCACCCTGTATAAATAATCTGAGAACACATAAAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTATGGGCCCTTGCTAGTATTAAGAAGACAAAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATGATATATGCCAGGAGCAGAATTAGCGCAATATGGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGCAAAACATGGCATAGTAGGTTTTGCATTATTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATATTTTTGAAATGGGGGTATAATTATGGCACTATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGTATGGCGTTAGTAAAACGCATATTTCCAGAAGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTCGAAAATTATATATTCTTTCATTCGTCTATGCCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAAATTTATGGAGAAATACCAATTAGAAGATTTAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGCTGCTCTGGATGCAAAGGCAGATTATATACCGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATTAAGAGAGCGGGCTAAATGCCCGCCCGCTAACTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTTTCAAAAAACATATACATATCTTCTGCTGCTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCATTATCAGAACCCTCAAAATTAGCATTAATCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGAGCAGCAAAAAAGGAGAGTTTATCTCTCCCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTCTGACCTCTTTTTCAAGAAGTAACCTAACAAGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCACCACACATATTACAAGTAGCCGACACAACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCTACTTTTTTAACATACGATGTTGTACAGAGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATAATGCAAAACCTACTATGCCATGTTTTGCTTCTAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAAGTTGCGTTGGCAAATGCATTTGTGAAATTGAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTAAATTAACGAAAGACGATTCAACAGGAGTAACATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATAGATGAGCAATCTGAGAGACATACGAACAAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAATATCTTTAGTCGCTCGTGCTTGTCAGGTGTCATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCAATGAAGGCTAAAGACAGTGTGCTGAAGTTCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGGCAAGCTGGAAGATTATAGCCTGGAGAATTTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGAATTGCCCAACGTCTGCCATATGCAGCATTACCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGTTCCAATTTGACCAAAGGTCATTGGCATTTCTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATATCAGGTGGGTTACATACTGATGTCTTGGGTCGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGATACAGTCTGGTAGCCAACTCCTCGGTGGATATCTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTACCTTACCGTCATCTGCCTTCACCTACTTCCTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGCCATAATATACGGTTTCATTGTTTGCCAGAACTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTGTAAAGAGTGGTAATGTTAGTGAGTCATTGACCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATACCATTACATCCATGCATATCTTCTTGTCAATG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGATTGATAGTGAAAAGAAGGAGGATAGTTAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGTCAAGGATGGTTGCCTTGCTAATAGAAGCTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTAAAATCTCCTTTCTGTAACTTTCTAATTATATTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCCACAACAAACCTATCAGGAACAGCAGAAATCTTCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TAGGTTTTGTATTGTTTGTAATACTGTTAGAACTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCAACAGGATCGAAAGCATAAGAAACACTAGCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGATTTTGCTTGTCGTTAACATGGTTAAAGGGAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTCATAACCTTATAGGCATAAGTGCTGAATGTAAACCC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGATTTCAACCACGAGGAATTCCATAGGCATTACTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGATGTTTGGGAAGGTCTCCATCATGTATCTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACCACCCAGAGTTTGCACAAGGGGAAGGAGGGTTAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGTGGAACCCTATCCAGTATAACCCAGGTTGTAGAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTTAAGGAAATGCAAGAATACGGCTTTGAGATGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTATTTCCTGGTGGTTGCAGACATGGTGCAATGGGC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTCTTGATTGCTTCAAGTGCCTTGTTGAAAATCTGCT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTGCTGTCTCTGACTTACCTGTTCTGGTGTCTCCTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTTGGGGCATAAGGCTATAGCTATCACCGAACATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AACCACCAAAAGTTCCTAAAAAAGAAGCTGGCTATTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGAAGGTTCAATGAACATGTTGCCTTCAATTTCTGCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGTGAAGATGGACGAGAACGGGAATATTAGACCTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGTCCCCGGCTGAGACTGGGGTACCGCCTTCTGTAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCAGGAATAAGAGAGGTGAGTGAGCTAAATGAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGTCTGTGCCTACCGTGGAAGGACAGGGAGAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGGCTATACGCACGGTGTTCCTCACTGCTTCTACAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGAGACTCTCAAGCCTTATATGACCATAGAAAAACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACTTACCTGTCCACTGATTGCTCCAGTTATTTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCCTACCTGTCCAGGTGGTTGTTTCTGAAGACTCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAGGCAGGAAGGCAAGTGTGATGGAGACTTGGAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTGGCACCTATCTCTTCAGCTTTTTCATTCCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACCTATATTACCTCCTTATACTCTGGATATACCAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAGATTGATAGTGAAAAGAAGGAGGATAGTTAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACGTCAAGGATGGTTGCCTTGCTAATAGAAGCTGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AGTAAAAGAATTGGAAGGAGGCATAACAATGGACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATGTGTTATAGCGGAAGGATTGATGTTTGATGAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGCGTCACACACGACGCAGACAAGAAGAGAATTATTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGATGAGATTAGAAAGTTTGTGAAAGAAAATTGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATGCTAAATGACATAAAAATTGTACAATAAGGGAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAGGAGAATGAGAAACTTGTAGAAGAAAACAAACGGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAAAAATACGTCGCCTTGTAAATGCGGGGCAGGAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGAAAACAGGCAGAACGAAATAGCAAAAATATCTCG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCATTCTTCCCATTCTTCCCATTCTTTCTGTCTTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAGAAAAAAGCAAGAAAAAGCGGAGTTGCGTAGCGATT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGATACGTTAAAAGCAAGTGCCAATTTACTAACGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTGTCCCTCTATATGCACCTGCTGATTACTTGAAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATAAAGAATTTATTGGGGAATATTGCCCAGGTTATGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAGGTAGGAAAAGAAAAGGTAAGATACTTATCCCAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATACGTCCAGGCTGTATTTCCAAGAAAGAAATCCCTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAAAAAGCGGGCTTTAATAGACGCTACTCTTCTTG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCAAATTCTTTATCATAGTTTATATGTTCAACG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TATGGTTAAAATGTATTCGTCTGCAAATTTATCTATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTAAAAGAAGCACTACATGAAGGGATGATACAAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAGAAGTGGACTTAAATCATGTTAAAAATACAATG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TACATTTACGTAAAGATGATGAAATTGAAATATACAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GCACTTTCTGATATACCTAAAACCTGTGCAGTTTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCAATAGAACAGCGATTAGAAGGAGGGATAGTACAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACCAACCTTACTGAAGCCCGGTGCTGAAAAAATTTTAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GTGGAAAGTTGGCAGGTGCATAGCCAGTCATATGGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ACAGTGTGGATACCCTGCTGGCACCGTTCGTAAGAAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATCACTTAGCGTTCTGATATAATGAAGTAGGATGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTTCGGCTATCCCCCATCCATACCCCTCAATGTACA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTGCTTTGTGTAATTGCTTCATAGATTCCATATTCAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTTAAGAGAAGCTTCAATCATTGAGGAAGTAGACT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATTAATGAACATGGACAAAAAAGCAAAAGAAAAAGT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CGAATTTGATGCCCGTTCCAATTTTCAATCTTTAT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATCAAAACTAACCCATGGCGTTGTTACGCATACTGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCCATATATCTTCTGTTTTCCAATCATAAATTGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAAAAGCTTGTCATTCAATCAAACAAAAAATCAATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTTTTAGATTGTTTGATATAAAATTAATTGCTCCTTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGTATTACTCAATCCTCTTTGGGGAGCAGTAGGAGCAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTCATGAATAGATTTCCCTTGCATGTACATTAAGTCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATCCACAACAATATATCTATCATTTTGTTCATCA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AATAATAGAAAGAGGTTCAGGATTGACAGTTCATATA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AGAAATTAGATGCAATTGGTAATGAAAATTCATAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGGATATGGGGCTTGGTAAAACCTTTGTTGGAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCTGAAAGCAGTGATTTATTTGAACAAAGCAAGAAAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GAAAGATGAAGATTTATATTCTTTCAGGAAGCGGT
GTTTCAATTCCTTATATGTAGGCTAAAAAC	ATGACTTTAAGTTCTTTTGCTGTAATACCTTTCTTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CCAATTTCCTCACACTTCAACTTATATGGAAAGGAAG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAATTGCAAACTTATCAAATAAAAAGGTTGTTCCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAAAATTTCTTTAATGTCAATATTTAGTATTTCAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CAGCAATTATCGGAGAATATATCGTATACCCATCAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GGCTTGCCGTTATTTTGCCAACAATGTTGGCAGCAGG
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	AAAGTAAATATATTTTGATTCGGGTAAACGGCATGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CTTCTGCCACTTCTTTTTCCTTTACAAGCTTTTGGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	ATGTATCCAGTGACGCAAGATTTTTTAGAGAAGA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TCTAAAGACAGTTCTTTTACTTCTTCTAACAGCACTC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CACATACGTGTTTTGGGTGTTTCTTTATTTCGTGCTAC
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TGCAAAAAAAGCTGGTTTAAGTCATTCCTATATAAA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	GATGAAGGACCTCACAAGTGCGGAAGGGCTGGCTTTCTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	CATTAGGTACAGAGGTAGAAAAAATGTTCAATACTTA
GTTTCAATTCCTTATAGGTAGGCTAAAAAC	TTTAAAATCGTATAAAGAGCTTATTGAGCTGTATTT
GTTTCAATTCCTTATAGGTAGGCTAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014538.1\|WP_003867580.1\|2332621_2333062_-\|ACT-domain-containing-protein	unknown	unknown	gnl\|CDD\|179848
NC_014538.1\|WP_009052112.1\|2333268_2334048_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293819
NC_014538.1\|WP_009052104.1\|2369761_2370991_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NC_014538.1\|WP_009052114.1\|2330293_2331349_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|236013
NC_014538.1\|WP_009052108.1\|2362426_2364763_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_014538.1\|WP_003869923.1\|2347290_2348511_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NC_014538.1\|WP_009052111.1\|2338326_2339055_-\|peptidase-E	unknown	unknown	gnl\|CDD\|153240
NC_014538.1\|WP_003868738.1\|2369351_2369765_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
NC_014538.1\|WP_009052106.1\|2365502_2366384_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NC_014538.1\|WP_003871434.1\|2373470_2374217_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|273907
NC_014538.1\|WP_003869923.1\|2341523_2342744_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NC_014538.1\|WP_003871433.1\|2372047_2373451_-\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
NC_014538.1\|WP_009052107.1\|2364777_2365488_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09692_cas5_CAS-I-B	gnl\|CDD\|131641
NC_014538.1\|WP_003871087.1\|2336354_2336618_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_014538.1\|WP_004399629.1\|2370987_2372037_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|273908
NC_014538.1\|WP_003867575.1\|2336634_2337627_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NC_014538.1\|WP_009052105.1\|2366370_2368353_-\|TIGR02556-family-CRISPR-associated-protein	cas8b1	pfam09484_cas8b1_CAS-I-B	gnl\|CDD\|187861
NC_014538.1\|WP_004399630.1\|2368407_2369163_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NC_014538.1\|WP_003867574.1\|2337623_2338121_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_014538.1\|WP_009052113.1\|2331352_2332609_-\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783

Protein	Function_ID	Function_description	E-value
NC_014538.1\|WP_003867580.1\|2332621_2333062_-\|ACT-domain-containing-protein	gnl\|CDD\|179848	PRK04435, PRK04435, ACT domain-containing protein.	4.00304e-77
NC_014538.1\|WP_009052112.1\|2333268_2334048_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293819	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YycJ protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	5.33492e-58
NC_014538.1\|WP_009052104.1\|2369761_2370991_-\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NC_014538.1\|WP_009052114.1\|2330293_2331349_-\|threonine-synthase	gnl\|CDD\|236013	PRK07409, PRK07409, threonine synthase; Validated.	0
NC_014538.1\|WP_009052108.1\|2362426_2364763_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.50996e-47
NC_014538.1\|WP_003869923.1\|2347290_2348511_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.09297e-41
NC_014538.1\|WP_009052111.1\|2338326_2339055_-\|peptidase-E	gnl\|CDD\|153240	cd03146, GAT1_Peptidase_E, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.	1.63934e-66
NC_014538.1\|WP_003868738.1\|2369351_2369765_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.66901e-73
NC_014538.1\|WP_009052106.1\|2365502_2366384_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.99433e-73
NC_014538.1\|WP_003871434.1\|2373470_2374217_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|273907	TIGR01978, Probable_ATP-dependent_transporter_SufC, FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic () or associated with the membrane (). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	5.62145e-138
NC_014538.1\|WP_003869923.1\|2341523_2342744_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.09297e-41
NC_014538.1\|WP_003871433.1\|2372047_2373451_-\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NC_014538.1\|WP_009052107.1\|2364777_2365488_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	5.77817e-26
NC_014538.1\|WP_003871087.1\|2336354_2336618_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.0037e-34
NC_014538.1\|WP_004399629.1\|2370987_2372037_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|273908	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD. This protein, SufD, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. SufB and SufD are homologous. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	2.61499e-75
NC_014538.1\|WP_003867575.1\|2336634_2337627_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	2.18208e-180
NC_014538.1\|WP_009052105.1\|2366370_2368353_-\|TIGR02556-family-CRISPR-associated-protein	gnl\|CDD\|187861	cd09730, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as TM1802 family.	3.66501e-156
NC_014538.1\|WP_004399630.1\|2368407_2369163_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	8.76406e-41
NC_014538.1\|WP_003867574.1\|2337623_2338121_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	6.26269e-66
NC_014538.1\|WP_009052113.1\|2331352_2332609_-\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0

>NC_014538.1|WP_003869923.1|2347290_2348511_+|IS110-family-transposase
MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMESTGSYWKPIYNLLELESIKILLVNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDREQRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVVSDINGASSRSILEAIINGEENPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNRMLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQKSARTRKGNQKLRSSLIEAARAASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYHILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVTVESAVS
>NC_014538.1|WP_003869923.1|2341523_2342744_+|IS110-family-transposase
MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMESTGSYWKPIYNLLELESIKILLVNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDREQRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVVSDINGASSRSILEAIINGEENPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNRMLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQKSARTRKGNQKLRSSLIEAARAASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYHILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVTVESAVS
>NC_014538.1|WP_009052111.1|2338326_2339055_-|peptidase-E
MKKVVAIGGGEISKFETFKIDEEIVKLTDKAKPKALFVPTASGEPEAYCDNFDFVYGKMLGCETDILFLIKDDPDSSQIEKKISWADLIYVGGGNTKRMMEIWRSKGVDKMLIDAYQRGTVLSGLSAGAICWFKYGFSDSQRFENQENWHYTKVEGLGLFDAILCPHLNEENRRELFEKFMIDFEGVGIGLENGCAIEIVDDTFKIINSFENAHAYVFRRSENKLFVDEIRHRDYIPFNLLI
>NC_014538.1|WP_003867574.1|2337623_2338121_-|CRISPR-associated-protein-Cas4
MEFEVTGALMQSYTICKRQVWLMAHQIVPDQEHPYIEIGRLIDENSYQRDRKKIHFENVVLDLVRMEKDNILIGEVKKSSKAEDSAKMQLLFYLYKLKQSGITAKGQLFFPEERKREVVELTPEFEREVIKAIEEIKDIVYKEKPPAFIKIPYCKNCGYKEFCMS
>NC_014538.1|WP_003867575.1|2336634_2337627_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTIYIFSDGELKRKDNTLFFEGENGRKFIPVENTSEIMVFGEVSLNKRLLEFLTQSEIILHFFNHYGYYVGSYYPREHLNSGYMILRQAEHYNDGSKRLYLAQKFVEGAYKNIRQVLKYYSNRGKDLEDVIYSIEKLGESVDSTSTINELMAIEGNIREYYYKAFDEIIQNPDFKFDFRSKRPPQNFLNTLISFGNSLMYTTTLSEIYKTHLDPRIGFLHATNFRRFSLNLDVSEIFKPIIVDRTIFTLLSKKMVTKEDFEEDAEGLLLKEKGKKVFVQEFEDKLATTIKHRTLSNNVSYRRLIRLELYKLEKHLIEEEQYKPFIAQW
>NC_014538.1|WP_003871087.1|2336354_2336618_-|CRISPR-associated-endonuclease-Cas2
MFLILVYDVNEKRVNKVLKTCRKYLHWVQNSVLEGEISEANLKKLKIELSRIIDKDEDSVIFYILRTTKYSEREILGLRKGGEDIII
>NC_014538.1|WP_009052112.1|2333268_2334048_-|MBL-fold-metallo-hydrolase
MKFCSLRSGSSGNAIYINHKDVHILIDAGLSGRTIEKALFNIGVTPKSLSAILITHEHKDHIIGAGVLSRRYNIPIYANKATWEVMEKDIKEISEKNKLYFTTGEEFEIGDVKIMPFKKPHDAVEPVGFSFKCGDKKISIATDLGYMTRGVANHLIGSDVVLLEANHDIEMLINGSYPWPLKKRILSNLGHLSNDAAADALMKLFKMKAIGIAFLGHLSQNNNRPELAFATVTNMLKKSGVKFEVRMALRNIESDVVEI
>NC_014538.1|WP_003867580.1|2332621_2333062_-|ACT-domain-containing-protein
MGEDGKLYIIREEILSDSLKKTLKVKELLESGKVKTINEAVKQVGISRSAFYKYRDYVFPFSKFSKGKIITLSMVLDHMPGVLSSILDVVANARGNVVTINQSMPSMGVASVTISIDTQYMEMSLENFLEKLSSQNGVRKIEILGE
>NC_014538.1|WP_009052113.1|2331352_2332609_-|homoserine-dehydrogenase
MKIGLMGLGTVGTGVVHLINQNGKNIEKKIGEKIEIKKILVKDPNKKRTPLAEGKITFDANDILEDEEIDVVVEVMGKEHPALEYIIKALKKGKHVVTANKEVIAVHGKELIKLATENKVSLLYEASVGGGIPIIRPLKQCLAANKIYEIKGILNGTTNYILTEMKEKGFDFEEVLKEAQQKGYAEADPTDDVEGFDAARKLAILSTLAFNKFILPEKIYTKGIKSISKADIKYAEELGYNVKLIAYAKIDEEDRLEAWVHPVMIKKDNPLNGVNGVFNAILVDGNAVGEVMFYGQGAGMMPTASAVVADIMDVKNHIVIQNGCEDGDLLPIVDTVSKYYIRLIAFDKPGVMSKITGILGDKGISLLSVVQKGVLGDTAEIVLITHIANTGKVFEALEEIQNLKEVECIESVIRVEGE
>NC_014538.1|WP_009052114.1|2330293_2331349_-|threonine-synthase
MGWEGLIKAYREFMPKIKEENIVTLKEGNTPLYEAVNLQKLFPGIKIYLKYEGLNPTGSFKDRGMTVAVSQAKEEGSNAVVCASTGNTSASAAAYAAKAGLKSIVLIPGGKIALGKLAQAIAYGAKVIAIDGNFDDALRLVREISQKFPITLVNSINPYRLEGQKTASFEICDELKDAPSYVALPVGNAGNITAYWMGFKEYYNAKRITRLPKMLGFQAAGAAPIVENRVIEKPETIATAIRIGNPASWEKAVAARDESGGLIDKVTDEEILEAYALLAKSEGIFAEPASAASIAGVIKKYKEGFFKEGESVVCVLTGNGLKDPDTAVKLGGEIKTIEANLKALEEVLYGE
>NC_014538.1|WP_009052108.1|2362426_2364763_-|CRISPR-associated-helicase/endonuclease-Cas3
MKYYSHYDEEMKYEKLLYEHLIEVKNLSINQIPEEYKKAYEIIALCHDFGKYTSYFQEYLKTKKKTSLSNHSFISAVFGGYVAIQYYGEENILPLIVYNTILHHHGNLESFSVNLPSKFKDVSRKDFPLNVSEKIDISYKQLKDMRQNLSFIIPDFERLGLAKEFKQFVEEENVIKDTLAILKKLEALSIRRLKSDENYFIHQMLYSALISADKISASNTYLPEELYVDYKTLNKIRENQFEISEKDIDKIRTEIFKVVIENLEKNYNKSKIFSITAPTGTGKTVTGFFAALKLKELLGGNRKIIYSLPFTSIIEQNYGVLFELLEKLDKFKGNSSRYIIKHHNLAMIEYESEYRDYKKTEAELLIENWQSGIIITTFVQLLETLVGARNRMLKKFNALKGSIIILDEIQAINIKYFQLVDYILNKASEYLDLRIIIMTATKPMILNDAVELLDNNEKYFSIFKRTRLMPQMEKLTIESFIEKFKENLEDKSYLIVCNTIMQSLEIYKRLVELGLNREIFYLSTNILPLHRRERINKIKEKLEKEEKIILVSTQVVEAGVDFDFDVVIRDLGPIDSIIQSAGRCNRNGKKEIGDVYVYKMIDEEENLFGKYVYGNTLMNISENILKRYDTIMEEKYFQLINEYFSMVMQNKSSQVSREFIKSIENLDFSEGEYAIDSFSLIENNPGYFEAFFIYDDVAEDIFKKYLKLSNIKDFNARREAYLEIQKNIKDYILSLPKKYINNFQLDKGIPYLPKEGIKDIYDFKTGFKRDIDDKYMIF
>NC_014538.1|WP_009052107.1|2364777_2365488_-|type-I-B-CRISPR-associated-protein-Cas5
MVIFDLWGKFAHFRKFYTNSSSLTYSVPPRTTVEGMIAALLGYERDTYYEKLNAENLYVAVRKMSKTKKIMQSVNYIKATTLGELHFPKQHTQIPFELLISDSKIRYRFYIIHKDENIFREIKERLFKKAPVFPLYFGSAPFSCYIDYVEEVTWDWATSEDFQDIYSVMPSDKIKEIDIKNMKGYLLKERMPRDFGIDRTIKEVTTYVYEDVGHPIRVKVNGEFIKLSNGENIVFM
>NC_014538.1|WP_009052106.1|2365502_2366384_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MSVNNNEILYIYDAKLTNPNGDPDEENRPRMDYEREINLVSDLRLKRYIRDYLMLKGYDIFVRLVDDKPVTADKRVKDLEDSSNEWILENWIDVRMFGATMTVQKDTKTFIGPIQFNWGYSLNKVELLEASITSHFSSSETFAQGTIGKDFRVKYSLIAFSGVVSGHRAEKTKLKEDDLYLLDEALKHAIPNLVTRSKIGQYPRIYMRVEYVDKVTILGDFRDYIELKTTTDSIRDINECSLEMVKLVNLLNENKNKIKNVYYFVDERLELNINGEKVTFEEAFKELPLKKVD
>NC_014538.1|WP_009052105.1|2366370_2368353_-|TIGR02556-family-CRISPR-associated-protein
MIKIIEGIVQIGDIVRENDPVKNIIVELPYKKGDNALHVLKFNFLPEENKLEIDVNEEMDEGTVFKYLYVGKILGNSPLWYASSTSSDYILTETIYNLTKMDFGEELNKKLKDIFEKFYVSIEELEPKYRYVLDLSKSGYKEKSVQDLFKEIKEDKKNENLSPNEIGKKFRKKVSKYFEGYLKKEKNIEPEEIGLYTVFIEGKPLSSYKEYVDAVIESKKPKTQKTKKAGISRGVCSICGSQDAIAFDSSKVKFKFFTTNQIIFASSLSKNNYYKNMQMCSECFSKYQAGENYISNKLSTKLTAFDVLIIPQFIHGKPISKYDLEIATDKIIDSFNTVKSYEGIERLREEIGTSLDLTDEKSYFLLNFIFYEIDSQATKILRLIKDVDPSIFERVRIALENANKDVKEILGEKYKGTITLSTVYYINPIRIKDGKAVKYRDILEIYDAILTGKNLSKKHIINNLVDGVRIIKFKKGGYNIIPEKRYIEFYLLEASMYVKFLEYMGCLKEGERLDVSQLKIDENIKTFISNMNYNEQETAMFLLGYLIGQIGNVQYKKAQKGIQDEGTPNKPILNKINFNGLDKQKIIRLTKDVFNKLNQEKILHYNEVTFYDMKRLIDSNIRNWKLNKDESLFYVLSGYSYATAIPILKEKKEVGSNVSE
>NC_014538.1|WP_004399630.1|2368407_2369163_-|CRISPR-associated-endoribonuclease-Cas6
MRITLEFVGEKNLVLPIHYNYIVQGFLYDLMGDSEFAAFLHDEGFQYEKRKFKLFTFSRIEGEFKILTDSKGQKKISIKPPFKFTVASPLDEFIFDISKNALKKEYCHFNGQKFILNSLNIDNPPVFKNKARIKFISPVVMYTTLKDGDIKYTYYYSPWDEKFSPLLLNNLLKKYELVYKIKAEDPYFKLYPLSEKEDRRYSKMIKYKNVYVKGWMGIYDVESSPELLELAYYTGLGAKNSQGFGCFEIIG
>NC_014538.1|WP_003868738.1|2369351_2369765_-|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MSDLNQLYSEVIMEHYENSPHRRELKDATHKERGHNPLCGDDITLYLKMNGDIIEDASFTGHGCAISQASTSMMIDLIKGKDKKEALRLVQEFIDMIHKKDVNLDELGDAQVLHGVSDFPARVKCALLAWKTLQEIL
>NC_014538.1|WP_009052104.1|2369761_2370991_-|cysteine-desulfurase
MKNIDIERIKKDFPILSVKPHGKRLVYLDNAATTQKPIEVIKAMDKYYEELNANVYRSPHYLSVLSTQAYEEARERVKKFINAKRGESIVFTRNTTESINFIAYTWGMKHINEGDEILLTIAEHHSNILPWQMVAEAKGAKLKYVYLDENFRLSMKDFKEKMSEKVKLVAVQHMSNVLGIINPVEEITHIAHKYGAKVLIDGAQSVPHMPVDVQKIDCDFFAFSGHKMLGPMGIGVLYIKEDLLKEVPPFLRGGEMIDEVYEDHSTFAPSPLKFEAGTPNIEGAYVLISAIDYIEKIGLTNIYKHEGELLEYGLQKMKELDFVKLYGPKDAKERGGIISFNVEGVHPHDVATILDEEGVAVRSGHHCCQPLMRYLGVPATVRASFYLYNDFEDIDALVEGLKKVRKWFK
>NC_014538.1|WP_004399629.1|2370987_2372037_-|Fe-S-cluster-assembly-protein-SufD
MWKRVSMEEIQQPSYKEYTSAVIKDLSHDTVKIKETKKLAGLPTEILALRDKAFGIEGKFINMVKDFYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNLVIVGKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREIIIKGHIGRRIIK
>NC_014538.1|WP_003871433.1|2372047_2373451_-|Fe-S-cluster-assembly-protein-SufB
MKKPDIKEIDFSIYDVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQKMPMPTWGVDLSQLDIDSIIAYIRPSAKMQRSWDEVPEEIRRTFERLGIPEAERKALAGVGAQYDSEVVYHNIKESLTQQGVIFEDMDTAIKKYPDIIKEYFMTKNVTPYDHKFAALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVHFIEGCSAPQYSVSNLHAGCVELFVNEGARIIYSTIENWSKNTYNLNTKRAIVEKDGIIEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTFAAKGQHLDTGSKMIHLAPHTSSKVLAKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSDTMPVIEIENDNVDIGHEAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG
>NC_014538.1|WP_003871434.1|2373470_2374217_-|Fe-S-cluster-assembly-ATPase-SufC
MRETLLEIKDLHVEVEDKYILKGLNLTIKKGEIHAIMGPNGGGKSTLCNSIMGNPKYKVTSGQILFEGEDITNLKVNERAKKGIFLSFQYPEEIPGITVDNFIRTSVNIVTGQNVSMLQFAKDMKNTLELLDMKSEYRSRYLNVGFSGGEKKKTEILQMAFLKPKLVMLDEIDSGLDIDALKVVAEAVKKLKTEEMSILIVTHYNRILDYLEPDVISVLMDGKIVKSGDRDLAKILEEKGYDFVRNGV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014538_5	5.119\|2356468\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2356468-2356503	36	NC_004979	Thermoanaerobacterium thermosaccharolyticum plasmid pNB2, complete sequence	512-547	3	0.917
NC_014538_5	5.180\|2360518\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2360518-2360552	35	MH937499	Streptococcus phage CHPC1062, complete genome	26406-26440	3	0.914
NC_014538_5	5.180\|2360518\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2360518-2360552	35	MH937467	Streptococcus phage CHPC877, complete genome	26183-26217	3	0.914
NC_014538_5	5.189\|2361117\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2361117-2361153	37	KX190835	Bacillus phage vB_BtS_BMBtp15, complete genome	4338-4374	7	0.811
NC_014538_4	4.53\|2346303\|35\|NC_014538\|CRT,PILER-CR,CRISPRCasFinder	2346303-2346337	35	MK560763	Virgibacillus phage Mimir87, complete genome	13001-13035	8	0.771
NC_014538_5	5.55\|2352214\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2352214-2352249	36	NZ_CP050185	Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence	130928-130963	8	0.778
NC_014538_5	5.64\|2352809\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2352809-2352844	36	AJ972879	Yersinia phage phiR1-37 complete genome	118493-118528	8	0.778
NC_014538_5	5.64\|2352809\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2352809-2352844	36	NC_016163	Yersinia phage phiR1-37, complete genome	118493-118528	8	0.778
NC_014538_5	5.137\|2357663\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2357663-2357697	35	GU557055	Puniceispirillum phage HMO-2011, complete genome	8150-8184	8	0.771
NC_014538_5	5.177\|2360319\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2360319-2360355	37	KT070867	Bacillus phage PBC2, complete genome	71869-71905	8	0.784
NC_014538_5	5.188\|2361051\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2361051-2361086	36	NC_010631	Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence	339077-339112	8	0.778
NC_014538_5	5.17\|2349689\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2349689-2349724	36	NC_017232	Borreliella afzelii PKo plasmid lp17, complete sequence	13620-13655	9	0.75
NC_014538_5	5.20\|2349887\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2349887-2349922	36	NC_010821	Pseudomonas phage 201phi2-1, complete genome	82643-82678	9	0.75
NC_014538_5	5.30\|2350554\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2350554-2350590	37	NZ_MK715471	Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence	68476-68512	9	0.757
NC_014538_5	5.30\|2350554\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2350554-2350590	37	NZ_CP053838	Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence	60562-60598	9	0.757
NC_014538_5	5.32\|2350687\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2350687-2350723	37	FJ008913	Bacteroides phage B40-8 culture-collection ATCC:51477-B1, complete genome	40437-40473	9	0.757
NC_014538_5	5.32\|2350687\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2350687-2350723	37	NC_011222	Bacteroides phage B40-8, complete genome	40437-40473	9	0.757
NC_014538_5	5.32\|2350687\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2350687-2350723	37	NC_016770	Bacteroides phage B124-14, complete genome	29045-29081	9	0.757
NC_014538_5	5.32\|2350687\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2350687-2350723	37	HE608841	Bacteroides phage B124-14 complete genome	29045-29081	9	0.757
NC_014538_5	5.32\|2350687\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2350687-2350723	37	MT630433	Bacteroides phage vB_BfrS_23, complete genome	32287-32323	9	0.757
NC_014538_5	5.55\|2352214\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2352214-2352249	36	MT774380	CrAssphage cr1_1, complete genome	73256-73291	9	0.75
NC_014538_5	5.62\|2352676\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2352676-2352712	37	NZ_MK715471	Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence	68476-68512	9	0.757
NC_014538_5	5.62\|2352676\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2352676-2352712	37	NZ_CP053838	Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence	60562-60598	9	0.757
NC_014538_5	5.64\|2352809\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2352809-2352844	36	MH319749	Marine virus AG-345-F15 Ga0172271_11 genomic sequence	65406-65441	9	0.75
NC_014538_5	5.64\|2352809\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2352809-2352844	36	MH319754	Marine virus AG-345-L05 Ga0172272_11 genomic sequence	45033-45068	9	0.75
NC_014538_5	5.155\|2358858\|36\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2358858-2358893	36	MN693855	Marine virus AFVG_250M616, complete genome	10012-10047	9	0.75
NC_014538_4	4.20\|2344119\|36\|NC_014538\|CRT,PILER-CR,CRISPRCasFinder	2344119-2344154	36	MK448820	Streptococcus phage Javan617, complete genome	4422-4457	10	0.722
NC_014538_5	5.25\|2350220\|38\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2350220-2350257	38	AP014323	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C38, * SEQUENCING IN PROGRESS *	35416-35453	10	0.737
NC_014538_2	2.4\|2149417\|37\|NC_014538\|CRT,PILER-CR	2149417-2149453	37	NZ_CP046255	Sphingobium sp. CAP-1 plasmid p2, complete sequence	8928-8964	11	0.703
NC_014538_2	2.4\|2149417\|37\|NC_014538\|CRT,PILER-CR	2149417-2149453	37	NZ_CP046255	Sphingobium sp. CAP-1 plasmid p2, complete sequence	19344-19380	11	0.703
NC_014538_5	5.76\|2353604\|38\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2353604-2353641	38	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	159178-159215	11	0.711
NC_014538_5	5.161\|2359257\|37\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359257-2359293	37	CP053333	Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence	102327-102363	12	0.676
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP039212	Piscirickettsia salmonis strain Psal-103 plasmid unnamed3, complete sequence	28546-28580	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP048069	Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p3, complete sequence	8789-8823	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP048069	Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p3, complete sequence	47135-47169	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038896	Piscirickettsia salmonis strain Psal-006a plasmid unnamed3, complete sequence	11933-11967	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038925	Piscirickettsia salmonis strain Psal-011 plasmid unnamed2, complete sequence	46143-46177	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038955	Piscirickettsia salmonis strain Psal-040 plasmid unnamed3, complete sequence	11934-11968	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038960	Piscirickettsia salmonis strain Psal-041 plasmid unnamed3, complete sequence	10519-10553	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP039200	Piscirickettsia salmonis strain Psal-161 plasmid unnamed5, complete sequence	15199-15233	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038813	Piscirickettsia salmonis strain Psal-001 plasmid unnamed2, complete sequence	46142-46176	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP013771	Piscirickettsia salmonis strain PM23019A plasmid p3PS3, complete sequence	21140-21174	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP033943	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-6, complete sequence	34616-34650	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP013767	Piscirickettsia salmonis strain PM21567A plasmid p5PS2, complete sequence	11463-11497	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP039233	Piscirickettsia salmonis strain SR1 plasmid unnamed6, complete sequence	26242-26276	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP013775	Piscirickettsia salmonis strain PM37984A plasmid p2PS4, complete sequence	34431-34465	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP013780	Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence	5448-5482	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP013780	Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence	47104-47138	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038915	Piscirickettsia salmonis strain Psal-010a plasmid unnamed2, complete sequence	46143-46177	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP039206	Piscirickettsia salmonis strain Psal-182 plasmid unnamed2, complete sequence	35605-35639	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP050939	Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p1, complete sequence	30854-30888	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038934	Piscirickettsia salmonis strain Psal-025 plasmid unnamed2, complete sequence	46431-46465	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP039221	Piscirickettsia salmonis strain NVI 5692 plasmid unnamed2, complete sequence	61377-61411	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038974	Piscirickettsia salmonis strain Psal-069 plasmid unnamed2, complete sequence	59567-59601	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP012417	Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-4, complete sequence	3740-3774	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038888	Piscirickettsia salmonis strain Psal-004 plasmid unnamed2, complete sequence	46144-46178	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP039216	Piscirickettsia salmonis strain Psal-104a plasmid unnamed2, complete sequence	60780-60814	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038911	Piscirickettsia salmonis strain Psal-009 plasmid unnamed3, complete sequence	10499-10533	12	0.657
NC_014538_5	5.163\|2359390\|35\|NC_014538\|CRISPRCasFinder,CRT,PILER-CR	2359390-2359424	35	NZ_CP038878	Piscirickettsia salmonis strain Psal-002 plasmid unnamed2, complete sequence	46143-46177	12	0.657

1. spacer 5.119|2356468|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NC_004979 (Thermoanaerobacterium thermosaccharolyticum plasmid pNB2, complete sequence) position: , mismatch: 3, identity: 0.917

taggttttgtattgtttgtaatactgttagaactgt	CRISPR spacer
tcgattttgtcttgtttgtaatactgttagaactgt	Protospacer
* *.****** *************************

2. spacer 5.180|2360518|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to MH937499 (Streptococcus phage CHPC1062, complete genome) position: , mismatch: 3, identity: 0.914

tccatatatcttctgttttccaatcataaattgga	CRISPR spacer
cccaaatatcttctgttttccaatcgtaaattgga	Protospacer
.*** ********************.*********

3. spacer 5.180|2360518|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to MH937467 (Streptococcus phage CHPC877, complete genome) position: , mismatch: 3, identity: 0.914

tccatatatcttctgttttccaatcataaattgga	CRISPR spacer
cccaaatatcttctgttttccaatcgtaaattgga	Protospacer
.*** ********************.*********

4. spacer 5.189|2361117|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to KX190835 (Bacillus phage vB_BtS_BMBtp15, complete genome) position: , mismatch: 7, identity: 0.811

cctgaaagcagtgatttatttgaacaaagcaagaaac	CRISPR spacer
acagataagagtgagttatttgaacaaagtaagaaac	Protospacer
 * ** *. ***** **************.*******

5. spacer 4.53|2346303|35|NC_014538|CRT,PILER-CR,CRISPRCasFinder matches to MK560763 (Virgibacillus phage Mimir87, complete genome) position: , mismatch: 8, identity: 0.771

cgtagtttttgaagaagtaaaggaggattactctt	CRISPR spacer
ctttgttttggaagaaataaaggaggatttttcag	Protospacer
* * ***** ******.************ .**

6. spacer 5.55|2352214|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050185 (Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence) position: , mismatch: 8, identity: 0.778

---attccgctactatatttgctaattcttcttttgtta	CRISPR spacer
taaatt---gttctttatttggtaattcttcttttgttg	Protospacer
   ***    * ** ****** ****************.

7. spacer 5.64|2352809|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to AJ972879 (Yersinia phage phiR1-37 complete genome) position: , mismatch: 8, identity: 0.778

tagaaaacttacacctgaagaaattgaagaaaccgt	CRISPR spacer
tgcaacttttactcctgaacaaattgaagaaacctt	Protospacer
*. **  .**** ****** ************** *

8. spacer 5.64|2352809|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NC_016163 (Yersinia phage phiR1-37, complete genome) position: , mismatch: 8, identity: 0.778

tagaaaacttacacctgaagaaattgaagaaaccgt	CRISPR spacer
tgcaacttttactcctgaacaaattgaagaaacctt	Protospacer
*. **  .**** ****** ************** *

9. spacer 5.137|2357663|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to GU557055 (Puniceispirillum phage HMO-2011, complete genome) position: , mismatch: 8, identity: 0.771

---atgtctgtgcctaccgtggaaggacagggagaagt	CRISPR spacer
ggtaagtc---acctaccgttgaaggacaggaagaaga	Protospacer
   * ***   .******** **********.*****

10. spacer 5.177|2360319|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to KT070867 (Bacillus phage PBC2, complete genome) position: , mismatch: 8, identity: 0.784

gattaatgaacatggacaaaaaagcaaaagaaaaagt-----	CRISPR spacer
gattaatgaacatggaaaagaaagc-----aaaacgttttta	Protospacer
**************** **.*****     **** **

11. spacer 5.188|2361051|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NC_010631 (Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence) position: , mismatch: 8, identity: 0.778

cctggatatggggcttggtaaaacctttgttggaag	CRISPR spacer
cgatgttgtggggcttggtaaaacattagttggaac	Protospacer
*   * *.**************** ** *******

12. spacer 5.17|2349689|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NC_017232 (Borreliella afzelii PKo plasmid lp17, complete sequence) position: , mismatch: 9, identity: 0.75

gctgctcttctttttgaaactttttagcttctgcaa	CRISPR spacer
caagttcttcttttgtaaactttttagcttcttctc	Protospacer
   *.*********  **************** *

13. spacer 5.20|2349887|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NC_010821 (Pseudomonas phage 201phi2-1, complete genome) position: , mismatch: 9, identity: 0.75

taggttttaaagtacactacagggttggtggtggtg	CRISPR spacer
cacgtcgtaaagtacactacatgtttggtggtgaat	Protospacer
.* **. ************** * *********.

14. spacer 5.30|2350554|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 9, identity: 0.757

aattgtttttcttcttttgtaagttcaagttcaagcc	CRISPR spacer
atctcttgttcttctttggtaagttcaagttctaaat	Protospacer
* .* ** ********* ************** *. .

15. spacer 5.30|2350554|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 9, identity: 0.757

aattgtttttcttcttttgtaagttcaagttcaagcc	CRISPR spacer
atctcttgttcttctttggtaagttcaagttctaaat	Protospacer
* .* ** ********* ************** *. .

16. spacer 5.32|2350687|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to FJ008913 (Bacteroides phage B40-8 culture-collection ATCC:51477-B1, complete genome) position: , mismatch: 9, identity: 0.757

aaatgtttgttttgacaaactcaattactttcttttc	CRISPR spacer
aaatctttgttttgccaaactcaattgcggttttcaa	Protospacer
**** ********* ***********.*  *.**.

17. spacer 5.32|2350687|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NC_011222 (Bacteroides phage B40-8, complete genome) position: , mismatch: 9, identity: 0.757

aaatgtttgttttgacaaactcaattactttcttttc	CRISPR spacer
aaatctttgttttgccaaactcaattgcggttttcaa	Protospacer
**** ********* ***********.*  *.**.

18. spacer 5.32|2350687|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NC_016770 (Bacteroides phage B124-14, complete genome) position: , mismatch: 9, identity: 0.757

aaatgtttgttttgacaaactcaattactttcttttc	CRISPR spacer
aaatctttgttttgccaaactcaattgcggttttcaa	Protospacer
**** ********* ***********.*  *.**.

19. spacer 5.32|2350687|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to HE608841 (Bacteroides phage B124-14 complete genome) position: , mismatch: 9, identity: 0.757

aaatgtttgttttgacaaactcaattactttcttttc	CRISPR spacer
aaatctttgttttgccaaactcaattgcggttttcaa	Protospacer
**** ********* ***********.*  *.**.

20. spacer 5.32|2350687|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to MT630433 (Bacteroides phage vB_BfrS_23, complete genome) position: , mismatch: 9, identity: 0.757

aaatgtttgttttgacaaactcaattactttcttttc	CRISPR spacer
aaatctttgttttgccaaactcaattgcggttttcaa	Protospacer
**** ********* ***********.*  *.**.

21. spacer 5.55|2352214|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to MT774380 (CrAssphage cr1_1, complete genome) position: , mismatch: 9, identity: 0.75

attccgctactatatttgctaattcttcttttgtta	CRISPR spacer
tataatccaataaatttgataattcttcttttgtta	Protospacer
  *   *.* ** ***** *****************

22. spacer 5.62|2352676|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 9, identity: 0.757

aattgtttttcttcttttgtaagttcaagttcaagcc	CRISPR spacer
atctcttgttcttctttggtaagttcaagttctaaat	Protospacer
* .* ** ********* ************** *. .

23. spacer 5.62|2352676|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 9, identity: 0.757

aattgtttttcttcttttgtaagttcaagttcaagcc	CRISPR spacer
atctcttgttcttctttggtaagttcaagttctaaat	Protospacer
* .* ** ********* ************** *. .

24. spacer 5.64|2352809|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to MH319749 (Marine virus AG-345-F15 Ga0172271_11 genomic sequence) position: , mismatch: 9, identity: 0.75

tagaaaacttacacctgaagaaattg-------aagaaaccgt	CRISPR spacer
tagaaaacttccacctgaagatattgcttttccaag-------	Protospacer
********** ********** ****       ***

25. spacer 5.64|2352809|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to MH319754 (Marine virus AG-345-L05 Ga0172272_11 genomic sequence) position: , mismatch: 9, identity: 0.75

tagaaaacttacacctgaagaaattg-------aagaaaccgt	CRISPR spacer
tagaaaacttccacctgaagatattgcctttccaag-------	Protospacer
********** ********** ****       ***

26. spacer 5.155|2358858|36|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to MN693855 (Marine virus AFVG_250M616, complete genome) position: , mismatch: 9, identity: 0.75

ccattcttcccattcttcccattctttctgtctttt	CRISPR spacer
ccattcttcccgtttttcccattcttcttttttaac	Protospacer
***********.**.***********..* *.*  .

27. spacer 4.20|2344119|36|NC_014538|CRT,PILER-CR,CRISPRCasFinder matches to MK448820 (Streptococcus phage Javan617, complete genome) position: , mismatch: 10, identity: 0.722

gggttgtgctttaaaaagtttatgattaacactaca	CRISPR spacer
atgttgtgctataataagtttatgattaaccgattg	Protospacer
. ******** *** ***************    ..

28. spacer 5.25|2350220|38|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to AP014323 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C38, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.737

ggagtaaatcttttttagtgactttgtactttttagtg	CRISPR spacer
gagcaagatctttttgagtgactttgtattttttcatt	Protospacer
*..  *.******** ************.***** .*

29. spacer 2.4|2149417|37|NC_014538|CRT,PILER-CR matches to NZ_CP046255 (Sphingobium sp. CAP-1 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.703

gagagctgtattatcgaaggaaaaaatacttcaaagg	CRISPR spacer
tcccgtcaaaatatccagggaaaaaatacttcaaagg	Protospacer
    *... * **** *.*******************

30. spacer 2.4|2149417|37|NC_014538|CRT,PILER-CR matches to NZ_CP046255 (Sphingobium sp. CAP-1 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.703

gagagctgtattatcgaaggaaaaaatacttcaaagg	CRISPR spacer
tcccgtcaaaatatccagggaaaaaatacttcaaagg	Protospacer
    *... * **** *.*******************

31. spacer 5.76|2353604|38|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 11, identity: 0.711

gcaagccttaaattatctaaatcataaatctttttgta	CRISPR spacer
aaagattttaaattatctaaatcataaatattttcaat	Protospacer
. *....********************** ****..

32. spacer 5.161|2359257|37|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to CP053333 (Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence) position: , mismatch: 12, identity: 0.676

atacgtccaggctgtatttccaag-----aaagaaatccctg	CRISPR spacer
ccaaatccaggctgtattttcaagaaacaaaaaagat-----	Protospacer
 .* .**************.****     ***.*.**

33. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039212 (Piscirickettsia salmonis strain Psal-103 plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

34. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048069 (Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

35. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048069 (Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

36. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038896 (Piscirickettsia salmonis strain Psal-006a plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

37. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038925 (Piscirickettsia salmonis strain Psal-011 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

38. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038955 (Piscirickettsia salmonis strain Psal-040 plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

39. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038960 (Piscirickettsia salmonis strain Psal-041 plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

40. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039200 (Piscirickettsia salmonis strain Psal-161 plasmid unnamed5, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

41. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038813 (Piscirickettsia salmonis strain Psal-001 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

42. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013771 (Piscirickettsia salmonis strain PM23019A plasmid p3PS3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

43. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033943 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-6, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

44. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013767 (Piscirickettsia salmonis strain PM21567A plasmid p5PS2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

45. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039233 (Piscirickettsia salmonis strain SR1 plasmid unnamed6, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

46. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013775 (Piscirickettsia salmonis strain PM37984A plasmid p2PS4, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

47. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013780 (Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

48. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013780 (Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

49. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038915 (Piscirickettsia salmonis strain Psal-010a plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

50. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039206 (Piscirickettsia salmonis strain Psal-182 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

51. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050939 (Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p1, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

52. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038934 (Piscirickettsia salmonis strain Psal-025 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

53. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039221 (Piscirickettsia salmonis strain NVI 5692 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

54. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038974 (Piscirickettsia salmonis strain Psal-069 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

55. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012417 (Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-4, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

56. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038888 (Piscirickettsia salmonis strain Psal-004 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

57. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039216 (Piscirickettsia salmonis strain Psal-104a plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

58. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038911 (Piscirickettsia salmonis strain Psal-009 plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

59. spacer 5.163|2359390|35|NC_014538|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038878 (Piscirickettsia salmonis strain Psal-002 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

571771 : 580549

Moraxella_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003866813.1\|571771_573154_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	6.9e-58	33.9
WP_009051717.1\|573214_573676_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	4.8e-24	45.6
WP_003866811.1\|573695_574403_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	NA	NA	NA
WP_003866810.1\|574404_574653_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003866809.1\|574655_575330_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_009051716.1\|575332_577534_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	6.9e-169	43.9
WP_009051715.1\|577512_578910_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	8.2e-59	33.6
WP_009051714.1\|578927_579938_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.0e-74	45.2
WP_003866805.1\|579934_580549_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.3e-20	35.9

DBSCAN-SWA_2

943825 : 952108

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009052540.1\|943825_944551_+	RNA polymerase sporulation sigma factor SigE	A0A2H4JC68	uncultured_Caudovirales_phage	1.7e-20	45.7
WP_004402381.1\|944620_945391_+	RNA polymerase sporulation sigma factor SigG	A0A0Y0AU18	Bacillus_phage	6.3e-45	44.1
WP_003867938.1\|945459_945705_+	YlmC/YmxH family sporulation protein	NA	NA	NA	NA
WP_009052539.1\|945772_946249_+	transcriptional repressor NrdR	NA	NA	NA	NA
WP_009052538.1\|946296_947001_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.9e-40	39.3
WP_009052537.1\|947000_948371_+	PAS domain S-box protein	W8CYF6	Bacillus_phage	2.6e-41	39.7
WP_003867942.1\|948452_949337_+	phosphate ABC transporter substrate-binding protein	E3SLK5	Synechococcus_phage	1.3e-14	29.1
WP_003867943.1\|949533_950433_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_003867944.1\|950429_951317_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_009052536.1\|951358_952108_+	phosphate ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	4.6e-16	29.9

DBSCAN-SWA_3

1559322 : 1674162

112

Erysipelothrix_phage(62.96%)

holin,coat,portal,protease,terminase,head,transposase,tRNA,tail,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012268686.1\|1559322_1560741_+\|transposase	transposase	NA	NA	NA	NA
WP_003867211.1\|1561197_1562271_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.0e-38	33.9
WP_009053023.1\|1562302_1564090_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.0e-53	33.5
WP_009053022.1\|1564238_1565240_-	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA
WP_009053021.1\|1565327_1565567_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_009053020.1\|1565683_1566973_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	3.1e-161	66.2
WP_009053019.1\|1566999_1568544_-	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_012268685.1\|1568556_1569303_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_003867203.1\|1569316_1570498_-	phosphoglycerate kinase	NA	NA	NA	NA
WP_009053017.1\|1570564_1571572_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_009053016.1\|1571620_1572643_-	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_003870203.1\|1574254_1574527_-	acylphosphatase	NA	NA	NA	NA
WP_009053015.1\|1574545_1575370_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_009053014.1\|1575542_1575971_+	transcriptional repressor	NA	NA	NA	NA
WP_009053013.1\|1576017_1577493_-	VanW family protein	NA	NA	NA	NA
WP_009053012.1\|1577591_1578233_-	endonuclease III	NA	NA	NA	NA
WP_009053011.1\|1578213_1579356_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_009053010.1\|1579355_1581716_-	ATP-binding protein	NA	NA	NA	NA
WP_009053009.1\|1581823_1582051_-	alpha/beta-type small acid-soluble spore protein	NA	NA	NA	NA
WP_009052854.1\|1582421_1582610_-	ferredoxin	NA	NA	NA	NA
WP_009052855.1\|1582732_1583389_-	transcriptional regulator	NA	NA	NA	NA
WP_009052856.1\|1583445_1584786_-	radical SAM protein	NA	NA	NA	NA
WP_009052857.1\|1584929_1585085_-	cache protein	NA	NA	NA	NA
WP_003868662.1\|1585363_1585657_-	hypothetical protein	NA	NA	NA	NA
WP_009052858.1\|1585812_1587456_-	nucleoside kinase	A0A2K9L178	Tupanvirus	2.7e-08	27.6
WP_009052859.1\|1587833_1588730_+	radical SAM protein	NA	NA	NA	NA
WP_009052860.1\|1588721_1589579_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	7.6e-15	28.2
WP_003868658.1\|1589666_1590131_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_003868657.1\|1590119_1590317_-	YgiT-type zinc finger protein	NA	NA	NA	NA
WP_009052862.1\|1591565_1592897_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.8e-95	43.9
WP_009052863.1\|1592910_1593276_-	HIRAN domain-containing protein	NA	NA	NA	NA
WP_156770528.1\|1593616_1593796_-	hypothetical protein	NA	NA	NA	NA
WP_009052866.1\|1593847_1595068_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_156770524.1\|1595091_1595685_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_009052868.1\|1595775_1596561_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003868548.1\|1596911_1597397_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_004103231.1\|1597554_1598019_-	signal peptidase II	NA	NA	NA	NA
WP_009052869.1\|1598105_1600466_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.2e-115	35.8
WP_004103228.1\|1600479_1600854_-	winged helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	5.1e-16	41.1
WP_009052870.1\|1601170_1602742_-	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	1.4e-171	60.2
WP_009052871.1\|1602743_1603196_-	recombinase	A0A2K5B2B3	Erysipelothrix_phage	4.1e-28	48.9
WP_009052872.1\|1603165_1604725_-	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	9.5e-157	53.8
WP_004103221.1\|1604777_1605008_-	hypothetical protein	A0A2K5B2B1	Erysipelothrix_phage	2.5e-05	40.6
WP_009052873.1\|1605139_1605841_-	N-acetylmuramoyl-L-alanine amidase	H7BVK7	unidentified_phage	6.2e-47	42.7
WP_004103217.1\|1605837_1606248_-\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	5.0e-49	67.4
WP_038016876.1\|1606329_1608801_-	glycosyl hydrolase	A0A2K5B2A1	Erysipelothrix_phage	0.0e+00	69.4
WP_009052875.1\|1608797_1609379_-	hypothetical protein	A0A2K5B2A0	Erysipelothrix_phage	9.9e-51	54.5
WP_009052876.1\|1609388_1609583_-	hypothetical protein	A0A2K5B299	Erysipelothrix_phage	1.0e-15	58.5
WP_009052877.1\|1609598_1612121_-\|tail	phage tail protein	A0A2K5B298	Erysipelothrix_phage	0.0e+00	63.3
WP_009052878.1\|1612125_1612899_-\|tail	phage tail family protein	A0A2I4R672	Erysipelothrix_phage	6.3e-77	53.9
WP_009052879.1\|1612912_1615471_-	tape measure protein	A0A2K9V3J7	Faecalibacterium_phage	4.6e-39	39.0
WP_009052880.1\|1615685_1616069_-	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	2.8e-41	68.3
WP_009052881.1\|1616081_1616684_-\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	3.3e-81	76.6
WP_009052882.1\|1616687_1617041_-	hypothetical protein	A0A2K5B293	Erysipelothrix_phage	3.2e-28	52.7
WP_009052883.1\|1617037_1617469_-	HK97 gp10 family phage protein	A0A2K5B292	Erysipelothrix_phage	1.8e-44	61.5
WP_012268680.1\|1617461_1617797_-\|head,tail	head-tail adaptor protein	A0A2K5B291	Erysipelothrix_phage	7.8e-32	61.3
WP_009052885.1\|1617800_1618109_-\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	2.4e-43	82.4
WP_012268679.1\|1618128_1618347_-	hypothetical protein	A0A2K5B289	Erysipelothrix_phage	1.1e-15	62.2
WP_009052887.1\|1618362_1619562_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	4.7e-172	74.4
WP_009052888.1\|1619573_1620254_-\|protease	Clp protease ClpP	A0A2K5B288	Erysipelothrix_phage	1.9e-77	64.7
WP_009052889.1\|1620250_1621507_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	1.4e-198	81.1
WP_049886822.1\|1621525_1623124_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	9.5e-253	80.2
WP_009052891.1\|1623197_1623383_-	DUF5049 domain-containing protein	NA	NA	NA	NA
WP_009052892.1\|1623367_1623829_-	gamma-glutamylcyclotransferase	G3MAQ5	Bacillus_virus	7.2e-20	36.9
WP_009052893.1\|1623866_1624766_-	amidoligase family protein	A0A2K9V489	Faecalibacterium_phage	7.4e-53	41.6
WP_009052894.1\|1624901_1625129_-	DUF4314 domain-containing protein	E4ZFL7	Streptococcus_phage	2.8e-09	42.6
WP_009052895.1\|1625128_1625818_-	virulence protein	A0A2K5B280	Erysipelothrix_phage	4.2e-56	52.3
WP_009052896.1\|1625969_1627253_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.4e-34	32.7
WP_009052897.1\|1627844_1629083_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	5.9e-178	71.1
WP_012268677.1\|1629063_1630239_-	methionine adenosyltransferase	A0A2K5B278	Erysipelothrix_phage	2.5e-178	79.0
WP_009052899.1\|1630256_1630808_-\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	3.7e-79	76.5
WP_009052900.1\|1630919_1631279_-	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	9.8e-41	64.4
WP_009052901.1\|1631398_1631857_-	hypothetical protein	NA	NA	NA	NA
WP_009052902.1\|1631861_1633211_-	DEAD/DEAH box helicase	A0A2K5B273	Erysipelothrix_phage	3.0e-167	71.8
WP_009052903.1\|1633191_1633473_-	VRR-NUC domain-containing protein	A0A2K5B272	Erysipelothrix_phage	1.8e-26	64.4
WP_012268676.1\|1633730_1636076_-	virulence-associated E family protein	A0A1W6JQ82	Corynebacterium_phage	3.1e-212	46.7
WP_009052904.1\|1636072_1636492_-	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	8.2e-39	50.0
WP_009052905.1\|1636495_1637287_-	phage antirepressor KilAC domain-containing protein	A0A0B5A507	Paenibacillus_phage	3.8e-69	49.4
WP_009052906.1\|1637373_1639308_-	DNA polymerase	A0A2K5B2B0	Erysipelothrix_phage	6.3e-251	65.7
WP_009052907.1\|1639304_1639865_-	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	3.5e-69	73.2
WP_009052908.1\|1639870_1640998_-	DUF2800 domain-containing protein	A0A2K5B2A8	Erysipelothrix_phage	3.2e-154	70.1
WP_009052909.1\|1640994_1641312_-	hypothetical protein	A0A2K5B2A7	Erysipelothrix_phage	3.2e-19	58.1
WP_009052910.1\|1641304_1641514_-	hypothetical protein	NA	NA	NA	NA
WP_009052911.1\|1641631_1642126_-	RNA polymerase subunit sigma-24	NA	NA	NA	NA
WP_003350897.1\|1642290_1642437_-	hypothetical protein	NA	NA	NA	NA
WP_009052912.1\|1642784_1643801_+	hypothetical protein	NA	NA	NA	NA
WP_009052913.1\|1643793_1644243_+	hypothetical protein	NA	NA	NA	NA
WP_009052914.1\|1644247_1646026_+	AAA family ATPase	NA	NA	NA	NA
WP_009052915.1\|1646049_1646262_+	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	1.1e-12	47.5
WP_009052916.1\|1646313_1646523_+	type I restriction-modification system subunit M N-terminal domain-containing protein	NA	NA	NA	NA
WP_009052917.1\|1648149_1649808_+	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	3.1e-20	28.5
WP_009052918.1\|1649812_1651204_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_009052919.1\|1651205_1651667_+	TFIIB-type zinc ribbon-containing protein	NA	NA	NA	NA
WP_009052920.1\|1651686_1652439_+	hypothetical protein	NA	NA	NA	NA
WP_009052921.1\|1652458_1655431_+	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_009052922.1\|1655456_1656356_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_009052923.1\|1656558_1657917_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	1.2e-57	32.7
WP_003868343.1\|1658124_1658298_+\|coat	spore coat associated protein CotJA	NA	NA	NA	NA
WP_003868342.1\|1658302_1658560_+\|coat	spore coat protein CotJB	NA	NA	NA	NA
WP_003868341.1\|1658573_1659146_+	manganese catalase family protein	NA	NA	NA	NA
WP_006569951.1\|1659162_1659663_-	YbaK/EbsC family protein	NA	NA	NA	NA
WP_009052924.1\|1659631_1662055_-	homocysteine S-methyltransferase family protein	NA	NA	NA	NA
WP_003871154.1\|1662068_1662980_-	methylenetetrahydrofolate reductase	NA	NA	NA	NA
WP_009052925.1\|1663647_1665273_+	alpha-glucan family phosphorylase	NA	NA	NA	NA
WP_009052926.1\|1665318_1666674_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_009052927.1\|1666852_1667350_+	nitroreductase family protein	NA	NA	NA	NA
WP_009052928.1\|1667368_1668595_+	peptidase T	NA	NA	NA	NA
WP_009052929.1\|1668716_1669655_-	DUF1848 domain-containing protein	NA	NA	NA	NA
WP_009052930.1\|1669746_1671309_-	citramalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	2.1e-07	38.2
WP_009052931.1\|1671457_1672372_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009052932.1\|1672391_1673030_-	ABC transporter permease	NA	NA	NA	NA
WP_009052933.1\|1673049_1674162_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.6e-27	33.8

DBSCAN-SWA_4

2113778 : 2121715

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009053003.1\|2113778_2114933_-	cysteine desulfurase NifS	H7BUW1	unidentified_phage	1.9e-45	42.9
WP_009053004.1\|2115009_2115948_-	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	1.7e-100	64.3
WP_009053005.1\|2116118_2118218_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.8e-111	36.2
WP_009053006.1\|2118238_2118604_-	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	2.3e-13	36.2
WP_081448161.1\|2119021_2119117_+	DUF1540 domain-containing protein	NA	NA	NA	NA
WP_009053008.1\|2119348_2119597_-	SHOCT domain-containing protein	NA	NA	NA	NA
WP_003868306.1\|2119671_2121057_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.2e-39	36.7
WP_009052962.1\|2121019_2121715_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.1e-40	39.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014538

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection