CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_014414	Parvularcula bermudensis HTCC2503, complete sequence	1 crisprs	cas3,csa3,DEDDh,WYL,cas2,cas1,cas4,cas7,cas8c,cas5	0	7	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_014414_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014414_1

1517235-1518818

TypeI

Consensus_repeat	Method
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CRISPRCasFinder
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CRT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	PILER-CR

24 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NC_014414_1

>merge|NC_014414|1|1517235-1518818|CRISPRCasFinder,CRT,PILER-CR
ATGTCGATCCACGCCCCTGTGAGGGGGCGACTTTTGCGAAGTGCGTTTATGATGACCGGCATTGGTTTCGATCCACGCCCCTGTGAGGGGGCGACGATTCCCTGGGCTCCTCCGCCGTGCGCTATGATGGTTTCGATCCACGCCCCTGTGAGGGGGCGACCGCTGATGTGACCCTTGTCAATCAGGTGTTGCCAGTTTCGATCCACGCCCCTGTGAGGGGGCGACGCGCAGGTCGTGGCCCGTCCAGCCGCACCACAAGTTTCGATCCACGCCCCTGTGAGGGGGCGACGTGATGAGCTTGAGGCCCACGGCCCGCTACAGGGGGTTTCGATCCACGCCCCTGTGAGGGGGCGACTCTTGAGGTCGCCGATGAATTTATCACCGCGCTGTTTCGATCCACGCCCCTGTGAGGGGGCGACGGGCACGGCAGAGCCGGATGCCTCGCCAGATGTGTTTCGATCCACGCCCCTGTGAGGGGGCGACCCATTGGCCCTATGCTATTTTTGTCGAGGGCAATGTTTCGATCCACGCCCCTGTGAGGGGGCGACCCCAACTACGCGGGGGCCGTCCAGCTTATGCAGGTTTCGATCCACGCCCCTGTGAGGGGGCGACGGGATGGGGCAAGCGGGCGATCACCGCTTACCACGTTTCGATCCACGCCCCTGTGAGGGGGCGACAAGGGACAACCGGCGCGACGGTGAGCGTGAGACGGTTTCGATCCACGCCCCTGTGAGGGGGCGACACCGCAACAGAACGCTGGATGCGGGGTCGTCAAGTTTCGATCCACGCCCCTGTGAGGGGGCGACTATTGAGATCGTTGAGCCGAAACGACGGCGGCAGTTTCGATCCACGCCCCTGTGAGGGGGCGACAAGCAAAATGAATTGCGCACCACGACAGATCAGGGTTTCGATCCACGCCCCTGTGAGGGGGCGACGTTTCGATGGGGGAAGCCTGTGAGTATTTATACGGTTTCGATCCACGCCCCTGTGAGGGGGCGACCATCGCTCTCGCCCTCAGCGTCTTCCCAGTCTTCGTTTCGATCCACGCCCCTGTGAGGGGGCGACTTCTTAACACAGACCCGCGAACCATCCGGCGTTGGGTTTCGATCCACGCCCCTGTGAGGGGGCGACCTGGCCGAGGCGATCAAAACCTGTCCGTCGGCGGTTTCGATCCACGCCCCTGTGAGGGGGCGACCGGGCCGTGGGCCTCAAGCTCATCACCATTGGGCAGTTTCGATCCACGCCCCTGTGAGGGGGCGACCTCAATCATTGGCCTTCCCTTTCTTCTGTGGCCTGTTTCGATCCACGCCCCTGTGAGGGGGCGACCGCAAGGGGTAACACCAGCTGCACGTTGCCGGGGTTTCGATCCACGCCCCTGTGAGGGGGCGACTTGCAGATAGACCCACTCGGCGAGCGGTGGCATGTTTCGATCCACGCCCCTGTGAGGGGGCGACATTATGGGAGAAAAAATCGCGCGGTGGAAAGGGTCGTTTCGATCCACGCCCCTGTGAGGGGGCGACCCGCGTTGTTGTGGACACTGGACGGCGGCCCGTGTTTCGATCCACGCCCCTGTGAGGGGGCGAC

>NC_014414|1|1|1517235-1518818|CRISPRCasFinder
ATGTCGATCCACGCCCCTGTGAGGGGGCGAC	TTTTGCGAAGTGCGTTTATGATGACCGGCATTG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GATTCCCTGGGCTCCTCCGCCGTGCGCTATGATG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CGCTGATGTGACCCTTGTCAATCAGGTGTTGCCA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GCGCAGGTCGTGGCCCGTCCAGCCGCACCACAA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GTGATGAGCTTGAGGCCCACGGCCCGCTACAGGGG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	TCTTGAGGTCGCCGATGAATTTATCACCGCGCT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GGGCACGGCAGAGCCGGATGCCTCGCCAGATGT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CCATTGGCCCTATGCTATTTTTGTCGAGGGCAAT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CCCAACTACGCGGGGGCCGTCCAGCTTATGCAG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GGGATGGGGCAAGCGGGCGATCACCGCTTACCAC
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	AAGGGACAACCGGCGCGACGGTGAGCGTGAGACG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	ACCGCAACAGAACGCTGGATGCGGGGTCGTCAA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	TATTGAGATCGTTGAGCCGAAACGACGGCGGCA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	AAGCAAAATGAATTGCGCACCACGACAGATCAGG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GTTTCGATGGGGGAAGCCTGTGAGTATTTATACG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CATCGCTCTCGCCCTCAGCGTCTTCCCAGTCTTC
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	TTCTTAACACAGACCCGCGAACCATCCGGCGTTGG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CTGGCCGAGGCGATCAAAACCTGTCCGTCGGCG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CGGGCCGTGGGCCTCAAGCTCATCACCATTGGGCA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CTCAATCATTGGCCTTCCCTTTCTTCTGTGGCCT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CGCAAGGGGTAACACCAGCTGCACGTTGCCGGG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	TTGCAGATAGACCCACTCGGCGAGCGGTGGCAT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	ATTATGGGAGAAAAAATCGCGCGGTGGAAAGGGTC
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CCGCGTTGTTGTGGACACTGGACGGCGGCCCGT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC

>NC_014414|1|1|1517235-1518818|CRT
ATGTCGATCCACGCCCCTGTGAGGGGGCGAC	TTTTGCGAAGTGCGTTTATGATGACCGGCATTG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GATTCCCTGGGCTCCTCCGCCGTGCGCTATGATG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CGCTGATGTGACCCTTGTCAATCAGGTGTTGCCA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GCGCAGGTCGTGGCCCGTCCAGCCGCACCACAA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GTGATGAGCTTGAGGCCCACGGCCCGCTACAGGGG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	TCTTGAGGTCGCCGATGAATTTATCACCGCGCT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GGGCACGGCAGAGCCGGATGCCTCGCCAGATGT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CCATTGGCCCTATGCTATTTTTGTCGAGGGCAAT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CCCAACTACGCGGGGGCCGTCCAGCTTATGCAG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GGGATGGGGCAAGCGGGCGATCACCGCTTACCAC
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	AAGGGACAACCGGCGCGACGGTGAGCGTGAGACG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	ACCGCAACAGAACGCTGGATGCGGGGTCGTCAA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	TATTGAGATCGTTGAGCCGAAACGACGGCGGCA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	AAGCAAAATGAATTGCGCACCACGACAGATCAGG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	GTTTCGATGGGGGAAGCCTGTGAGTATTTATACG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CATCGCTCTCGCCCTCAGCGTCTTCCCAGTCTTC
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	TTCTTAACACAGACCCGCGAACCATCCGGCGTTGG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CTGGCCGAGGCGATCAAAACCTGTCCGTCGGCG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CGGGCCGTGGGCCTCAAGCTCATCACCATTGGGCA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CTCAATCATTGGCCTTCCCTTTCTTCTGTGGCCT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CGCAAGGGGTAACACCAGCTGCACGTTGCCGGG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	TTGCAGATAGACCCACTCGGCGAGCGGTGGCAT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	ATTATGGGAGAAAAAATCGCGCGGTGGAAAGGGTC
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CCGCGTTGTTGTGGACACTGGACGGCGGCCCGT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC

>NC_014414|1|1|1518204-1518818|PILER-CR
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CATCGCTCTCGCCCTCAGCGTCTTCCCAGTCTTC
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	TTCTTAACACAGACCCGCGAACCATCCGGCGTTGG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CTGGCCGAGGCGATCAAAACCTGTCCGTCGGCG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CGGGCCGTGGGCCTCAAGCTCATCACCATTGGGCA
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CTCAATCATTGGCCTTCCCTTTCTTCTGTGGCCT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CGCAAGGGGTAACACCAGCTGCACGTTGCCGGG
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	TTGCAGATAGACCCACTCGGCGAGCGGTGGCAT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	ATTATGGGAGAAAAAATCGCGCGGTGGAAAGGGTC
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC	CCGCGTTGTTGTGGACACTGGACGGCGGCCCGT
GTTTCGATCCACGCCCCTGTGAGGGGGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014414.1\|WP_148235224.1\|1508787_1511235_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NC_014414.1\|WP_013300569.1\|1523720_1524395_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NC_014414.1\|WP_041535428.1\|1516734_1517169_+\|response-regulator	unknown	unknown	gnl\|CDD\|381103
NC_014414.1\|WP_041534936.1\|1519007_1519298_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_014414.1\|WP_013300566.1\|1520360_1520993_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NC_014414.1\|WP_013300568.1\|1521912_1523724_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|378245
NC_014414.1\|WP_013300560.1\|1513021_1514101_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NC_014414.1\|WP_013300574.1\|1529630_1530194_+\|elongation-factor-P	unknown	unknown	gnl\|CDD\|234788
NC_014414.1\|WP_013300573.1\|1528390_1529137_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|234640
NC_014414.1\|WP_013300565.1\|1519301_1520342_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_014414.1\|WP_013300567.1\|1521001_1521916_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NC_014414.1\|WP_148235223.1\|1504644_1505073_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NC_014414.1\|WP_013300555.1\|1505139_1506735_-\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|376718
NC_014414.1\|WP_013300562.1\|1514753_1516742_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|223715
NC_014414.1\|WP_013300572.1\|1528015_1528258_+\|hypothetical-protein	unknown	unknown	unknown
NC_014414.1\|WP_013300561.1\|1514097_1514751_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NC_014414.1\|WP_013300570.1\|1524463_1526812_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_014414.1\|WP_013300558.1\|1511450_1512173_-\|hypothetical-protein	unknown	unknown	unknown
NC_014414.1\|WP_041535426.1\|1506721_1508713_-\|sulfotransferase	unknown	unknown	gnl\|CDD\|379204
NC_014414.1\|WP_148235336.1\|1512253_1512820_-\|phosphoribosyl-AMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|226787

Protein	Function_ID	Function_description	E-value
NC_014414.1\|WP_148235224.1\|1508787_1511235_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.82299e-37
NC_014414.1\|WP_013300569.1\|1523720_1524395_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	3.46136e-115
NC_014414.1\|WP_041535428.1\|1516734_1517169_+\|response-regulator	gnl\|CDD\|381103	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins. Cyclic di-GMP phosphodiesterase response regulator RpfG, together with sensory/regulatory protein RpfC, constitute a two-component system implicated in sensing and responding to the diffusible signal factor (DSF) that is essential for cell-cell signaling. RpfC is a hybrid sensor/histidine kinase that phosphorylates and activates RpfG, which degrades cyclic di-GMP to GMP, leading to the activation of Clp, a global transcriptional regulator that regulates a large set of genes in the DSF pathway. RpfG contains a CheY-like receiver domain attached to a histidine-aspartic acid-glycine-tyrosine-proline (HD-GYP) cyclic di-GMP phosphodiesterase domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	5.46866e-39
NC_014414.1\|WP_041534936.1\|1519007_1519298_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.11557e-33
NC_014414.1\|WP_013300566.1\|1520360_1520993_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	6.29147e-46
NC_014414.1\|WP_013300568.1\|1521912_1523724_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NC_014414.1\|WP_013300560.1\|1513021_1514101_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.13144e-35
NC_014414.1\|WP_013300573.1\|1528390_1529137_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|234640	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator.	2.03367e-160
NC_014414.1\|WP_013300565.1\|1519301_1520342_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_014414.1\|WP_013300567.1\|1521001_1521916_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.02403e-140
NC_014414.1\|WP_148235223.1\|1504644_1505073_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.2697e-19
NC_014414.1\|WP_013300555.1\|1505139_1506735_-\|BCCT-family-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	0
NC_014414.1\|WP_013300562.1\|1514753_1516742_+\|PAS-domain-S-box-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.47187e-46
NC_014414.1\|WP_013300574.1\|1529630_1530194_+\|elongation-factor-P	gnl\|CDD\|234788	PRK00529, PRK00529, elongation factor P; Validated.	2.97403e-95
NC_014414.1\|WP_013300561.1\|1514097_1514751_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	9.5121e-62
NC_014414.1\|WP_013300570.1\|1524463_1526812_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.17529e-56
NC_014414.1\|WP_148235336.1\|1512253_1512820_-\|phosphoribosyl-AMP-cyclohydrolase	gnl\|CDD\|226787	COG4337, COG4337, Uncharacterized protein conserved in bacteria [Function unknown].	8.29961e-39
NC_014414.1\|WP_041535426.1\|1506721_1508713_-\|sulfotransferase	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	3.1782e-52

>NC_014414.1|WP_041535428.1|1516734_1517169_+|response-regulator
MNDFVKPEEILSRRVLVIDDEEANLLLLSTLLEREGYRDCHFVGEPSVALNRYLDLEPHIVLLDLMMPDVDGYQLLDSFRRHARPDEFLPVLVLTADTTVQSRRRALSLGAKDFVVKPFDVVEIGLRIANLLETQILYERLRRA
>NC_014414.1|WP_013300562.1|1514753_1516742_+|PAS-domain-S-box-protein
MGGSLQYLIARPWADLPLTAKGLVVIALPLFILMGSLMMLHQASYAEARAEDDVRRAFAIQRDIYQVHALLAEAASGVRGYLLTGQDRFLEPFRRAEGELPETYARLDIAIEDPGVRAAYDVFLDQADQKREGLDALLAQTRQAGNDRNGTAEILQMLIDNKTVLDDLRAQIDVIQALEGALLDERRERVERVRALYLSLTVISALIGLMGSLAAVYLFSTGIVRRVQGLERNAERLERGEPMIAFPPASDEIGRLAEQLDRASELLRAREQAVRDSEERFRLVVEGVQDYGIFALTPEGEVASWNTGAERIKGWQADEILGKHFARFYPSETRGYLPTQMLERARDHGTAEDEGWRVRKDGSRFWANVIVTALRDEAGELRGFAKVTRDITERKQSEEALKAAREAAVLASQAKSEFLSRTSHELRTPMSAIIGFAQVLELDHDDLAPRHQTATTQILKAARHLLSLINDLLDVSSIEAGTQALKLEEVSLLDVLEEAYSLAAPIVKAANLSFQFDQESAQYTVQCDRRRTIQVVLNLLTNAAKYNREGAYVALTVQPDGNDVVVSVTDDGAGIPDERIPRLFTPFDRLGQEKQRRTDGSGLGLALSKSLVETMGGRIGFRNATPPDRGASFWFTLPISRAGRGPEITDPETREEAAGVAE
>NC_014414.1|WP_013300561.1|1514097_1514751_+|response-regulator-transcription-factor
MKNPSSPRLVIIDDHELAREGLRLALVQRGFEVVAVGATAAEAIELTQTTDPDVVLLDIRLRDGPDGLAAAAGIKALNQSVAVVMLSLHDDADYVRAALKAGAKGYILKDTALDELCAELKTVLSGGVAIPQALLAAVLTPKAAAPPEYHLVERLTDREREVLRLISEGKTNKAIARELVISPATVKAHVERCLAKLGAADRTQAAVMMVRWMEAEG
>NC_014414.1|WP_013300560.1|1513021_1514101_+|two-component-sensor-histidine-kinase
METDPSPLADVRETVGELRALYRSAEARAARLRLLIQASGDLSAATGADLDSAIAANAQKAAHFAGFKDGKVTTDPKADGVALIAPGAEGRRVGTLILTREEGAGASTSEEDQEALGTLAQMIATAMDRGAREAERDRLLARLRDREAQLERTVSRLFSAQEDERRYVSRELHDGVAQTATALLRRLEASVEGSHPQHDDLPAIAKGLVQELRQVIAGLRPVVLDDLGLCPAIERLASDLQGDGYQVRTDIPDATTFSRPLATGLYRVAQEAISNIKKHAGGPCAVDITLNYSEENGRGMLTIRDHGVGFSPDRDARPERGENVGIEMMTERMLALGGSLSINEANGGGVCVRAKIGSA
>NC_014414.1|WP_148235336.1|1512253_1512820_-|phosphoribosyl-AMP-cyclohydrolase
MPQRLIPALLASVTLAGVPLASSTALAAGTTYAEETQITEADVAAVQQAWGNGIVAIGEAYTAGEDYEEAASEHIERFYAYGSKPVLFKPTLAAEDQFRGSFDEALSYFVGGSIEEDKGFAIAPYTNVRWENEGTLIFDDSAVAMGNYYFTTTEGNEVKVEYSFVYAPDEDGDLKIVLHHSALPYSPE
>NC_014414.1|WP_013300558.1|1511450_1512173_-|hypothetical-protein
MKTFYALVACAALTTMSAKAQSLGGVFGPVVDEGAAALEYRVGFTPETARFGQRIHYQQSFSDDLMGRGVIQVRETDNSHVEFDYLGGELFWQLSEDGRPWQTGLRFDTRLRNDERPHDIAVNWMNQWTLAERWRGRAVILSSVQFGDNAGDGVGLQTRGQIDYALPSGALSSGTSIGLELFSAYGTTAEFRDFDEQSHEIGPYAMLPLDGQFSLFTGVLFGLTDGAPDSNVKLWITRAF
>NC_014414.1|WP_148235224.1|1508787_1511235_-|TonB-dependent-receptor
MTKTRIGVSALALSVAMGTAAAQDPAGDRPILDTIVVTATKTETTAQDAPLALQAVNGDTLDELNAQTFDDYVRYLPNVSFGGRGPGQSTVYIRGLAVQPISVLLSGAQGTTPNVALYLDEQPVTAPGRNLDVYAADLDRIEVLPGPQGTLFGASSQAGTVRLITNKPELDTFGAGFDASIATTKDGEMSNALEAYINLPLVDEKLAFRGVVYDVTQGGYIDNVPGTFTTDPAINPQSAATPSAVSYETADNNLLAEEDFNDASYKGFRGSFLWEITPETTAYLQYTHQKIEADGVFDYDPEVGDLDVTRFFPDALEDDFDQTAWTIESRLGMLDVIYTGAYLDRQINQSVDYTGYNNAGGFISYYTCTYDNPAYITAYDIDPQFITPGGRECLNPAKGVVIDQGQKRTTHEFRVTTPQENRLRATLGVFYDNFEIETVDDFYYLATPDLGFARNAPISDAVQIDPSLRPAGVAFFNDIRRTEEQLAFFGEVTFDLIPDVLSVTGGLRVYEIDSDFEGSSNFADGIFQGSENTDRGRDYDVSGGHTPEPLETDGTVFKANVSWTPRPDTLIYGTYSEGFRPGGFNRGGGLASINPAFPTVETTYDTDEVTNYEFGWKAELFDNSLRWNGAVYFVETSDLQVSRFDPENVSILTFIENAADAEIFGTEGDLTWAATPELTLFGAYSYNDTELTAVNAEVIELAPVGSELPLVPELQLTSRARYELPLGTYNAYAQMGIQYASESFSSLADEIREEQEAYTTADLAFGAGKDGWNAELFVENLTDERAELFINEQDDIRRITTNRPRTIGLRMSYNY
>NC_014414.1|WP_041535426.1|1506721_1508713_-|sulfotransferase
MPQSGSSTHDAILSEAERLVRSGAFREAAATVEGILSTDPTHQAALYLRAVALRYCGDLTEAEETARYLCTTYPRYGRGAQEWGHSLKSLDRFQEALAAYIRAVQLNPALKASWEAIATLTADEEAKAHAKAEIARLTALPAALVSVESLTAEGKLQKAEDLCRAYLLNNKTDPEGMRLLARLGIETGVLDDAEFLLETAIALKPADKRIRLDYVEVLRRRQKFAAAMAAATTLRTETPDDPAILSAYANAALAAGRDQDAVDVYTDLLRRFPQSAELHLAQGHALKTTGESEGAIAAYRKAASIRPTYGDAYWSLANLKTYEFAEDEIRQMRTAEADPSIALDDRIHMCFALGKALEIRRLTDESFLYYDRGNRLKAEQLGYDPDRLSVELTAQRTFFTETRSASLFGRGIEEAGPIFIVGLPRAGSTLLEQILTAHSQIDGTAELPTIPALAHRLSGRRRRGDPSAYPDILSNLSKEELTDLGRTYLEETKILRTGAPLFTDKMPNNFRHIGLILTILPGAKIIDARRGAMDCCWSGFKQLFAEGQEFSYGLSHIGRYYREYVALMEHWERVAPGRILRIQYEDVVADLEGQVRRLLTYLDLPFEEQCLAFHQSARSVRTASAEQVRQPLYQSGVGQWRPYFDHLSDLFEVLGPELCDARE
>NC_014414.1|WP_013300555.1|1505139_1506735_-|BCCT-family-transporter
MQENDETSNDEIIGEADNPYETDYELGQDNVRFWGFDLHNPVFFVSAALILLFVSVTLLFQDSASSVLLGARDWVLSTLDWFFVSTINIVLLLAIAIGLSPLGKIRLGGEEAQPEFSLLSWLAMLFSAGMGIGMVFYGAAEPLAYYTDWSGTPYDVTPGTPEAERLAFSATLFHWGLAPWSVYAIVGLSLAFFTFNKGLPLTIRSAFYPLLGERIWGWPGHVIDLLAVIATIFGLATSLGLGAQQATQGLEILFGLENTTQTQIFFILGITSIAIISVVRGLEGGIRLLSNTNIIAAIGLLIFVIAAGPTLEILSAILINTRNYIVDMPKLSSPVGRGNIEWYRSWTIFYWAWWISWSPFVGMFIARVSRGRTIRQFLTAVLVVPTLAAICWFTAFGKIAINQTQANVGELADGVTEVSTVLFDMLALLPFGMLASGLAVALLIVFFVTSSDSGSLVIDSITAGGKLHAPVAQRIFWATMEGLIAIVLLVGGGATALGALQAGAVTAGLPFTFILLACSASLIVGLMRETP
>NC_014414.1|WP_148235223.1|1504644_1505073_-|MarR-family-transcriptional-regulator
MTETQTRSLAKEFGLTPTQLLFMQVLSAAPRATASFVAKEMSVSHGTVTALTDRLICNGLMTRTKGEEDRRQAILQLTPEGEALLKAVPGSLQERFEDRFEALELWEQAFILAALERTASMLDASDIEASPILATGPLSGDR
>NC_014414.1|WP_041534936.1|1519007_1519298_-|CRISPR-associated-endonuclease-Cas2
MLMLVTYDVSTSSPGGSRRLRRVARACLDFGQRVQNSVFECEVDPAQWVALRARLIAEIDEKEDSLRFYRLGAEGKRRIEHIGAKPVLDLDGPLLF
>NC_014414.1|WP_013300565.1|1519301_1520342_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRRLLNTIYVTSEDAWLRKDGENLVVEADGKERGRAPLHALEGVVCFNRTGASPALMAACAEKAITLSFLTPEGRFQARVEGAQTGNVLLRRAQYRMADDPSRSVPIVRGIVTAKAANQRTVLLRALRDHGEKLETPQRKAFEDAEARLGRIARRTAEAETIDVIRGFEGEAANVYFGVFDAMLHAAPRELRFGGRSRRPPLDRVNALLSFLYAMLGHDCRSALEGVGLDPQVGFLHTDRPGRASLALDLMEELRPVLADRLALTMINRGQIKARDFVVDAGGAISLTEDGRKLVLIAWQERKKRELRHPFLGESAAMGLVAHLQARLLSRHLRGDLDGYPPFIWR
>NC_014414.1|WP_013300566.1|1520360_1520993_-|CRISPR-associated-protein-Cas4
MLPPPDQHSEDTLTPISALQHHLFCPRQCALIHVERIWSEDSATAQGRLLHERVDGGKPDRREGIKIVRGMVLRSLTLKLSGKADVVEFHGQQPYPVEYKRGRPKRHRADEVQLCAQALCLEEMFGLTVPEGALFYGETRKRTVVSIDQELRRLTLDVIADCRTMIGEGRTPPPRRTPACRRCSLVGECCPDRLEKPPSVSKWLLRQLVD
>NC_014414.1|WP_013300567.1|1521001_1521916_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSTPVTNRHEFVLYFDVMNGNPNGDPDAGNMPRLDPETNKGLVSDVALKRKVRNYVALASDNRIYMTEGSTLNLLHKEAWAAVMPEITDKFNILPKDRQKARELTAWMCANFWDVRTFGAVMSTGVNAGQVRGPVQFTFARSVEAILPLEISITRMAATTEKDAEDKHGRTMGRKHIVPYGLYRAHGFVSAPLASDETKGTGFSEDDLELLWQALGNMFDHDRSAARGEMATRKLVVFRHESALGNAQAQSLFERVQTWRMYQGERRKVGDPNTDNWPPARHWTDYDVTIDREGLPTGVEVIER
>NC_014414.1|WP_013300568.1|1521912_1523724_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSILQALNSYYGRNPEIAKPGWSEEKFGWCIILKQDGTVFDIEPLHDASGKKPRLRTYTVPAAVKRTVGISPNFLWDKTAYVLGRTAGNGKRTADEHAAFVALHLEVLEDQKDEGLSALRRFLESWKPERFDAAPFKEEMLDANVMFRLEGERQFLHERDAAAALIEARVRTHDDAEGVFCLISGQIDHPARLHPTIKGVDGAQSSGAALVSFNLDAFTSLGKEQGDNAPTGEAAAFRYGAALNALLVRDGGNRLRRTIGDATVVFWADVSDVPGADDGAAAAADNWFADVAEPPTDESETARIRDDLKKIASGVSLSTLRPEIVEGTKFHVLGLSPNAARLSVRFWLTGDFGEFAAALVQHHKDLQIKPEPLGWTGPPSLSILLVRTTAAQGDFKNIPPNLAGEVMRAMLTGGPYPRTLLSAAIMRLRAGDSAATGWHAAVIRAVLNRQRRITSAQGEISMGLDRSHDNIGYQLGRLFAVYEMSQRAALGKVNATIRDRYFGAASATPASVFPLIVRGGQNHLSKVRKEKPGWATLIERELEEINSHFTPKPGGIWPRSLRLADQGEFAIGYYHQRATKLSNDTGEAIASDLADAAIEGTDA
>NC_014414.1|WP_013300569.1|1523720_1524395_-|type-I-C-CRISPR-associated-protein-Cas5
MSIRLHIWGDYACFTRPEMKVERVSYDVMTPSAARGILEAIHWKPAIRWHIDRLHVLKPIRFQSIRRNEVGAKASASNAKSAMKKGSTEGLGIVVDENRQQRAAMVLTNVAYVIEAHFTMTEKAGPEDTPAKHLSMFNRRAAKGQCFHRPCLGTREFAAEFALLGENDPLPEAKPRLEVRDDDFGWMLHDIDFASGRNESHFFRAVMKDGVIEVPPFKSGEVVK
>NC_014414.1|WP_013300570.1|1524463_1526812_-|CRISPR-associated-helicase/endonuclease-Cas3
MDRFAHSLPDQPKEQWEPLSDHLLAVGQAAAQFADEFGASPMAQVMGQLHDIGKVSAAYQRYIRTGHDDGSAQRGPDHSTAGAKEAITLYGNKLGRLLAYGIAGHHGGLMDFADLDRRRQKFIEDYTGWQEHAGELLSCKTLASAPLSQKENSIDKNFSKSFLGRMLFSCLVDADFLETERFYAVSSDAPNPTRGGTFTPSHLDSVRTYLMRIRNNNSELNTLRSTILDHATQKAALTPGLFTLTVPTGGGKTLTSLSFAGEHVIRHNLRRIIYVIPFTSIIEQTADVFRKEVELGDAILEHHSSFDWDKMPPFDDRDDENEGEDGRAKLRRDTENWDAPIVVTTAVQFFESLFTSRPSRARKLHNIVRSVIILDEVQSLPVHLLRPCMAALDELAKNYGCSIVLCTATQPALRVQDKALALKNKGDPHWGLDIPDERELAPRPKELYQKLRRVDVHWKREVVTDEEIAARFDEQAQMLCIVNSRAHARELFLQLRERGQEGAVHLSTLMCAQHRRHVLEKIRDDLKNKRPVRLVSTSLIEAGVDIDFPEVWRAATGHSSIAQAAGRCNREGKLEGLGQTVVFEPSDREPPKAIGPFLKAAADSFQKYSDDVLSLEAIREFYAGLYWRQGFEALDNARVPNGESDERFEIIKALRERAGTWEFPYKSVSKAFRLIDDVMVPVIIPYDDNCRNAIDALTHAPVPPKGIQQTLQQYTVPIPPSSRDTLLRDGAVAFIRPEAYGDRFATLVVTKPAEQPELYDEDLGLRIDADPVARNSESNIIS
>NC_014414.1|WP_013300572.1|1528015_1528258_+|hypothetical-protein
MTHFFLSSVTLAQPVISEPTLPTPIGDEMPVATPTTYLIVLGVVVGLLTLAFILSRILGTGRRRHSDDEILPVPFDPGRY
>NC_014414.1|WP_013300573.1|1528390_1529137_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MAGHSKWANIQHRKGRQDAKRSKLFSKLSKEITVAAKMGTPDPEMNPRLRLAVQNAKAQSMPKDNIERAIKKAESGEGDNYEEIRYEGRGPEGVGVIVEALTDNRNRTASEVRSTFTKNGGSLGETGSVSFGFDRMGLIQYPVDITSEDGMMEAAIEAGAEDVESSEDGHAVYCALEDLNDVSTALEARFGEPETVTPTWRPQITVPISDEKAETMMKLYEALDDLDDVQNVYTNFEMSDEVMAKLAS
>NC_014414.1|WP_013300574.1|1529630_1530194_+|elongation-factor-P
MKLNGNEIRPGNVIQHQDTLWVAVKVNAVKPGKGPAYAQVELKNLLDGRKLNERFRASETVERVRLEQKDHTFLYEEGEQLVFMDTESYEQINIEKEMVGERTAFLQDGMAVVVESHEGRPIGVSLPEQVTLEITETEPTVKGQTASSSYKPAVLENGLRIMVPPHITPNTRVIVNTETLDYVKRAD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014414_1	1.3\|1517395\|34\|NC_014414\|CRISPRCasFinder,CRT	1517395-1517428	34	DQ372923	Bacteriophage mu1/6, complete genome	17992-18025	7	0.794
NC_014414_1	1.3\|1517395\|34\|NC_014414\|CRISPRCasFinder,CRT	1517395-1517428	34	NC_007967	Streptomyces phage mu1/6, complete genome	17992-18025	7	0.794
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	239831-239863	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	233825-233857	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	243971-244003	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	227385-227417	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	243971-244003	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	237693-237725	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	237682-237714	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	243979-244011	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	243998-244030	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	243970-244002	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	239851-239883	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	239849-239881	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	239846-239878	7	0.788
NC_014414_1	1.7\|1517654\|33\|NC_014414\|CRISPRCasFinder,CRT	1517654-1517686	33	NZ_CP045373	Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence	107047-107079	7	0.788
NC_014414_1	1.7\|1517654\|33\|NC_014414\|CRISPRCasFinder,CRT	1517654-1517686	33	NZ_CP045373	Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence	148563-148595	7	0.788
NC_014414_1	1.7\|1517654\|33\|NC_014414\|CRISPRCasFinder,CRT	1517654-1517686	33	NZ_CP045378	Sulfitobacter sp. THAF37 plasmid pTHAF37_f, complete sequence	31899-31931	7	0.788
NC_014414_1	1.7\|1517654\|33\|NC_014414\|CRISPRCasFinder,CRT	1517654-1517686	33	NZ_CP018080	Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence	16125-16157	7	0.788
NC_014414_1	1.7\|1517654\|33\|NC_014414\|CRISPRCasFinder,CRT	1517654-1517686	33	NZ_CP018080	Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence	47024-47056	7	0.788
NC_014414_1	1.7\|1517654\|33\|NC_014414\|CRISPRCasFinder,CRT	1517654-1517686	33	NZ_CP018081	Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence	298044-298076	7	0.788
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	256746-256778	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	256169-256201	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	232596-232628	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	252451-252483	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	235235-235267	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	296618-296650	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	256737-256769	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	459829-459861	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1963071-1963103	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	236180-236212	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	847264-847296	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1225257-1225289	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	236494-236526	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	243529-243561	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	233687-233719	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	125012-125044	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	232820-232852	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	249303-249335	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	233940-233972	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	236511-236543	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	249303-249335	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	250915-250947	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	235205-235237	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	249303-249335	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	296690-296722	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	228601-228633	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	250915-250947	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	235205-235237	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	249303-249335	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	250915-250947	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	228602-228634	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	250915-250947	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	235205-235237	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	235205-235237	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	235205-235237	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	249303-249335	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	249303-249335	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	228602-228634	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	243512-243544	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	243486-243518	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	240114-240146	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	238254-238286	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	233716-233748	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	249303-249335	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	228602-228634	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	250915-250947	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	278775-278807	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	249300-249332	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	228602-228634	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	228602-228634	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	249303-249335	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	235205-235237	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	249303-249335	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	249303-249335	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	393847-393879	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1840177-1840209	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	399196-399228	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	180672-180704	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	154759-154791	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	847631-847663	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1861369-1861401	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1843471-1843503	8	0.758
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1843471-1843503	8	0.758
NC_014414_1	1.6\|1517590\|33\|NC_014414\|CRISPRCasFinder,CRT	1517590-1517622	33	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	30792-30824	8	0.758
NC_014414_1	1.19\|1518430\|35\|NC_014414\|CRISPRCasFinder,CRT,PILER-CR	1518430-1518464	35	GU936714	Synechococcus phage S-CBS2, complete genome	64042-64076	8	0.771
NC_014414_1	1.6\|1517590\|33\|NC_014414\|CRISPRCasFinder,CRT	1517590-1517622	33	NC_041878	Pectobacterium phage CBB, complete genome	147963-147995	9	0.727
NC_014414_1	1.11\|1517912\|34\|NC_014414\|CRISPRCasFinder,CRT	1517912-1517945	34	NZ_CP029453	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence	145599-145632	9	0.735
NC_014414_1	1.11\|1517912\|34\|NC_014414\|CRISPRCasFinder,CRT	1517912-1517945	34	NZ_CP023069	Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence	160645-160678	9	0.735
NC_014414_1	1.11\|1517912\|34\|NC_014414\|CRISPRCasFinder,CRT	1517912-1517945	34	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	567937-567970	9	0.735
NC_014414_1	1.11\|1517912\|34\|NC_014414\|CRISPRCasFinder,CRT	1517912-1517945	34	NZ_CP023065	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence	147324-147357	9	0.735
NC_014414_1	1.11\|1517912\|34\|NC_014414\|CRISPRCasFinder,CRT	1517912-1517945	34	NC_000914	Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence	437177-437210	9	0.735
NC_014414_1	1.11\|1517912\|34\|NC_014414\|CRISPRCasFinder,CRT	1517912-1517945	34	NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	164058-164091	9	0.735
NC_014414_1	1.3\|1517395\|34\|NC_014414\|CRISPRCasFinder,CRT	1517395-1517428	34	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1286693-1286726	10	0.706
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	595719-595751	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1237704-1237736	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	679505-679537	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	705884-705916	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	837284-837316	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	334926-334958	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1019180-1019212	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	588117-588149	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	842264-842296	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	681922-681954	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	597276-597308	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	518270-518302	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	597538-597570	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	696816-696848	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	600204-600236	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	681928-681960	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	696816-696848	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	660326-660358	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	687062-687094	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	696817-696849	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	705887-705919	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	595541-595573	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	660326-660358	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	687062-687094	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	696819-696851	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	660326-660358	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	595569-595601	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	660330-660362	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	687062-687094	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	687062-687094	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	687062-687094	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	696819-696851	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	696819-696851	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	595569-595601	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	618463-618495	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	618409-618441	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	647659-647691	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	684115-684147	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	687049-687081	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	696819-696851	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	595569-595601	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	660326-660358	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	696813-696845	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	595569-595601	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	595569-595601	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	696819-696851	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	687064-687096	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	696819-696851	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	696819-696851	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	41910-41942	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1434142-1434174	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1237205-1237237	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	2030805-2030837	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1576686-1576718	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	471060-471092	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1392171-1392203	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1352893-1352925	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	703882-703914	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1383404-1383436	10	0.697
NC_014414_1	1.9\|1517783\|33\|NC_014414\|CRISPRCasFinder,CRT	1517783-1517815	33	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1383404-1383436	10	0.697
NC_014414_1	1.11\|1517912\|34\|NC_014414\|CRISPRCasFinder,CRT	1517912-1517945	34	DQ372923	Bacteriophage mu1/6, complete genome	6960-6993	10	0.706
NC_014414_1	1.11\|1517912\|34\|NC_014414\|CRISPRCasFinder,CRT	1517912-1517945	34	NC_007967	Streptomyces phage mu1/6, complete genome	6960-6993	10	0.706
NC_014414_1	1.4\|1517460\|33\|NC_014414\|CRISPRCasFinder,CRT	1517460-1517492	33	NC_019364	Sulfitobacter guttiformis plasmid pSD118, complete sequence	53103-53135	11	0.667

1. spacer 1.3|1517395|34|NC_014414|CRISPRCasFinder,CRT matches to DQ372923 (Bacteriophage mu1/6, complete genome) position: , mismatch: 7, identity: 0.794

cgctgatgtgacccttgtcaatcaggtgt-tgcca	CRISPR spacer
cgaccatgtggcccttgtcgatcaggtgtgcgcc-	Protospacer
** . *****.********.********* .***

2. spacer 1.3|1517395|34|NC_014414|CRISPRCasFinder,CRT matches to NC_007967 (Streptomyces phage mu1/6, complete genome) position: , mismatch: 7, identity: 0.794

cgctgatgtgacccttgtcaatcaggtgt-tgcca	CRISPR spacer
cgaccatgtggcccttgtcgatcaggtgtgcgcc-	Protospacer
** . *****.********.********* .***

3. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

4. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

5. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

6. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

7. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

8. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

9. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

10. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

11. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

12. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

13. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

14. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

15. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccctccac	Protospacer
*.******************* * ** *. **

16. spacer 1.7|1517654|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP045373 (Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence) position: , mismatch: 7, identity: 0.788

gggcacggcagagccggatgcctcgccagatgt	CRISPR spacer
tgccgcagcagagccggatgcctggcctgatgg	Protospacer
 * *.*.**************** *** ****

17. spacer 1.7|1517654|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP045373 (Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence) position: , mismatch: 7, identity: 0.788

gggcacggcagagccggatgcctcgccagatgt	CRISPR spacer
tgccgcagcagagccggatgcctggcctgatgg	Protospacer
 * *.*.**************** *** ****

18. spacer 1.7|1517654|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP045378 (Sulfitobacter sp. THAF37 plasmid pTHAF37_f, complete sequence) position: , mismatch: 7, identity: 0.788

gggcacggcagagccggatgcctcgccagatgt	CRISPR spacer
tgccgcagcagagccggatgcctggcctgatgg	Protospacer
 * *.*.**************** *** ****

19. spacer 1.7|1517654|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP018080 (Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.788

gggcacggcagagccggatgcctcgccagatgt	CRISPR spacer
tgccgcagcagagccggatgcctggcctgatgg	Protospacer
 * *.*.**************** *** ****

20. spacer 1.7|1517654|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP018080 (Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.788

gggcacggcagagccggatgcctcgccagatgt	CRISPR spacer
tgccgcagcagagccggatgcctggcctgatgg	Protospacer
 * *.*.**************** *** ****

21. spacer 1.7|1517654|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP018081 (Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.788

gggcacggcagagccggatgcctcgccagatgt	CRISPR spacer
tgccgcagcagagccggatgcctggcctgatgg	Protospacer
 * *.*.**************** *** ****

22. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccttccac	Protospacer
*.******************* * ** .. **

23. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccttccac	Protospacer
*.******************* * ** .. **

24. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

25. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

26. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

27. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

28. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccttccac	Protospacer
*.******************* * ** .. **

29. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccttccac	Protospacer
*.******************* * ** .. **

30. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

31. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

32. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

33. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

34. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

35. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

36. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

37. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

38. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

39. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

40. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

41. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

42. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

43. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

44. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

45. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

46. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagccttccac	Protospacer
*.******************* * ** .. **

47. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

48. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

49. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

50. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

51. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

52. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

53. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

54. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

55. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

56. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

57. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

58. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

59. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

60. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

61. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

62. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

63. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

64. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

65. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

66. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

67. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

68. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

69. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

70. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

71. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

72. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

73. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

74. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

75. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

76. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

77. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

78. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

79. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

80. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

81. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

82. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

83. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

84. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
gtgcaggtcgtggcccgtccaccagcctgccac	Protospacer
*.******************* * ** .  **

85. spacer 1.6|1517590|33|NC_014414|CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 8, identity: 0.758

tcttgag-----gtcgccgatgaatttatcaccgcgct	CRISPR spacer
-----aggggtcgtcgccgatgaattgatcacctcgcc	Protospacer
     **     ************** ****** ***.

86. spacer 1.19|1518430|35|NC_014414|CRISPRCasFinder,CRT,PILER-CR matches to GU936714 (Synechococcus phage S-CBS2, complete genome) position: , mismatch: 8, identity: 0.771

cgggccgtgggcctcaagctcatcaccattgggca	CRISPR spacer
ggtgccgtgggccgcaagctcaacaccatcgaggc	Protospacer
 * ********** ******** ******.*.*

87. spacer 1.6|1517590|33|NC_014414|CRISPRCasFinder,CRT matches to NC_041878 (Pectobacterium phage CBB, complete genome) position: , mismatch: 9, identity: 0.727

tcttgaggtcgccgatgaatttatcaccgcgct	CRISPR spacer
cgttaagttcgccgatgaatttatcaactacat	Protospacer
. **.** ****************** *    *

88. spacer 1.11|1517912|34|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP029453 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence) position: , mismatch: 9, identity: 0.735

-----aagggacaaccggcgcgacggtgagcgtgagacg	CRISPR spacer
gctctcagg-----ccgccgcgacggtgagcttgagaca	Protospacer
      ***     *** ************* ******.

89. spacer 1.11|1517912|34|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP023069 (Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence) position: , mismatch: 9, identity: 0.735

-----aagggacaaccggcgcgacggtgagcgtgagacg	CRISPR spacer
gctctcagg-----ccgccgcgacggtgagcttgagaca	Protospacer
      ***     *** ************* ******.

90. spacer 1.11|1517912|34|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 9, identity: 0.735

-----aagggacaaccggcgcgacggtgagcgtgagacg	CRISPR spacer
gctctcagg-----ccgccgcgacggtgagcttgagaca	Protospacer
      ***     *** ************* ******.

91. spacer 1.11|1517912|34|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP023065 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence) position: , mismatch: 9, identity: 0.735

-----aagggacaaccggcgcgacggtgagcgtgagacg	CRISPR spacer
gctctcagg-----ccgccgcgacggtgagcttgagaca	Protospacer
      ***     *** ************* ******.

92. spacer 1.11|1517912|34|NC_014414|CRISPRCasFinder,CRT matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 9, identity: 0.735

-----aagggacaaccggcgcgacggtgagcgtgagacg	CRISPR spacer
gctctcagg-----ccgccgcgacggtgagcttgagaca	Protospacer
      ***     *** ************* ******.

93. spacer 1.11|1517912|34|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP029233 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence) position: , mismatch: 9, identity: 0.735

-----aagggacaaccggcgcgacggtgagcgtgagacg	CRISPR spacer
gctctcagg-----ccgccgcgacggtgagcttgagaca	Protospacer
      ***     *** ************* ******.

94. spacer 1.3|1517395|34|NC_014414|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 10, identity: 0.706

cgctgatgtgacccttgtcaatcaggtgttgcca	CRISPR spacer
ggatgatgtgagccttgtccatcaggtagacgaa	Protospacer
 * ******** ******* *******.     *

95. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

96. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

97. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

98. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

99. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

100. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

101. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

102. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

103. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

104. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

105. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

106. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

107. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

108. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

109. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

110. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

111. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

112. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

113. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

114. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

115. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

116. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

117. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

118. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

119. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

120. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

121. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

122. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

123. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

124. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

125. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

126. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

127. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

128. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

129. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

130. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

131. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

132. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

133. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

134. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

135. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

136. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

137. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

138. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

139. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

140. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

141. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

142. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

143. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

144. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

145. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

146. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

147. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

148. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

149. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

150. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

151. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

152. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

153. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

154. spacer 1.9|1517783|33|NC_014414|CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

cccaactacgcgggggccgtccagcttatgcag	CRISPR spacer
ggtcgagatgcggcggccgtccagcgtatgcag	Protospacer
  . .  *.**** *********** *******

155. spacer 1.11|1517912|34|NC_014414|CRISPRCasFinder,CRT matches to DQ372923 (Bacteriophage mu1/6, complete genome) position: , mismatch: 10, identity: 0.706

aagggacaaccggcgcgacggtgagcgtgagacg	CRISPR spacer
ctgggacatccggcccgacggtgagctgaacggg	Protospacer
  ****** ***** ***********  .* . *

156. spacer 1.11|1517912|34|NC_014414|CRISPRCasFinder,CRT matches to NC_007967 (Streptomyces phage mu1/6, complete genome) position: , mismatch: 10, identity: 0.706

aagggacaaccggcgcgacggtgagcgtgagacg	CRISPR spacer
ctgggacatccggcccgacggtgagctgaacggg	Protospacer
  ****** ***** ***********  .* . *

157. spacer 1.4|1517460|33|NC_014414|CRISPRCasFinder,CRT matches to NC_019364 (Sulfitobacter guttiformis plasmid pSD118, complete sequence) position: , mismatch: 11, identity: 0.667

gcgcaggtcgtggcccgtccagccgcaccacaa	CRISPR spacer
tttcaggtcgtggcccgtgcatccgcataggcg	Protospacer
 . *************** ** *****. .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

462333 : 471522

Staphylococcus_phage(42.86%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013299584.1\|462333_463356_+	Holliday junction branch migration DNA helicase RuvB	A0A0E3HYS2	Synechococcus_phage	2.4e-07	33.9
WP_013299585.1\|463352_463781_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
WP_013299586.1\|463766_464345_-	GTP cyclohydrolase I FolE	A0A2I7S8W4	Vibrio_phage	1.7e-42	47.4
WP_013299587.1\|464331_464820_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.7e-27	47.6
WP_013299588.1\|464819_465449_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	5.2e-45	47.3
WP_013299589.1\|465451_466045_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.6e-32	39.1
WP_013299590.1\|466044_467145_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	6.3e-38	33.7
WP_013299591.1\|467454_468009_-	DUF3035 domain-containing protein	NA	NA	NA	NA
WP_083811099.1\|468010_468637_-	signal peptidase II	NA	NA	NA	NA
WP_013299593.1\|468633_471522_-\|tRNA	isoleucine--tRNA ligase	A0A2H4UVG0	Bodo_saltans_virus	1.4e-60	24.9

DBSCAN-SWA_2

1402139 : 1413253

uncultured_Mediterranean_phage(62.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013300464.1\|1402139_1403165_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	4.1e-23	45.5
WP_013300465.1\|1403157_1403958_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	3.7e-32	33.3
WP_013300466.1\|1403941_1404772_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.6e-33	43.7
WP_013300467.1\|1404849_1405101_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	6.0e-05	56.5
WP_148235334.1\|1405134_1405443_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_013300469.1\|1405450_1406272_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	4.1e-34	36.8
WP_013300470.1\|1406415_1406883_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	5.2e-18	43.1
WP_013300471.1\|1407173_1408469_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	8.3e-106	55.5
WP_041534923.1\|1408532_1408985_+	transcriptional repressor NrdR	NA	NA	NA	NA
WP_041535400.1\|1408999_1409482_+	transcription antitermination factor NusB	NA	NA	NA	NA
WP_013300474.1\|1409474_1410437_+	thiamine-phosphate kinase	NA	NA	NA	NA
WP_013300475.1\|1410420_1410873_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_013300476.1\|1410997_1413253_+	AGE family epimerase/isomerase	A0A1V0SH58	Hokovirus	9.0e-23	26.4

DBSCAN-SWA_3

1580885 : 1611241

Dinoroseobacter_phage(15.38%)

head,protease,capsid,tRNA,tail,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013300627.1\|1580885_1583561_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.1e-139	39.0
WP_013300628.1\|1583557_1583923_-	DUF2834 domain-containing protein	NA	NA	NA	NA
WP_013300629.1\|1583957_1585730_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA
WP_083811109.1\|1585796_1586774_+	P1 family peptidase	NA	NA	NA	NA
WP_013300631.1\|1586807_1587281_-	copper chaperone PCu(A)C	NA	NA	NA	NA
WP_013300632.1\|1587406_1587838_+	DUF3126 family protein	NA	NA	NA	NA
WP_041534944.1\|1587818_1588493_+	uracil-DNA glycosylase family protein	NA	NA	NA	NA
WP_148235227.1\|1588547_1589519_-	hypothetical protein	NA	NA	NA	NA
WP_158305834.1\|1589814_1590933_+	hypothetical protein	A0A1V0SGX0	Hokovirus	2.1e-25	37.0
WP_013300637.1\|1590959_1591238_+	DUF1491 family protein	NA	NA	NA	NA
WP_013300638.1\|1591353_1592316_-	hypothetical protein	NA	NA	NA	NA
WP_013300639.1\|1592425_1594753_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_013300640.1\|1594848_1595340_+	YcgN family cysteine cluster protein	NA	NA	NA	NA
WP_041534945.1\|1595406_1595664_-	hypothetical protein	NA	NA	NA	NA
WP_013300641.1\|1595680_1596958_+	DNA-packaging protein	A0A1V0DY66	Dinoroseobacter_phage	6.1e-69	37.6
WP_013300642.1\|1596965_1598129_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	4.7e-52	37.6
WP_013300643.1\|1598125_1598362_+	hypothetical protein	NA	NA	NA	NA
WP_013300644.1\|1598358_1598829_+\|head,protease	HK97 family phage prohead protease	M4QSU2	Tetraselmis_viridis_virus	5.4e-15	39.8
WP_041534946.1\|1598825_1600031_+\|capsid	phage major capsid protein	A0A2D1GNH4	Pseudomonas_phage	5.6e-72	44.0
WP_013300646.1\|1600082_1600622_+\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_013300647.1\|1600618_1600933_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_013300648.1\|1600929_1601340_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_013300649.1\|1601351_1601762_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_013300650.1\|1601761_1602094_+	gene transfer agent family protein	NA	NA	NA	NA
WP_013300651.1\|1602258_1602792_+	hypothetical protein	D6PEW0	uncultured_phage	3.1e-06	36.5
WP_013300652.1\|1602784_1603408_+	DUF2460 domain-containing protein	K4JRP1	Caulobacter_phage	1.8e-18	31.9
WP_013300653.1\|1603407_1604274_+	DUF2163 domain-containing protein	A0A1V0DY93	Dinoroseobacter_phage	2.3e-35	29.4
WP_013300654.1\|1604270_1604717_+	C40 family peptidase	F4YXU4	Roseobacter_phage	3.9e-23	43.4
WP_013300655.1\|1604716_1608520_+\|tail	glycoside hydrolase/phage tail family protein	A0A0B5A7K5	Paracoccus_phage	6.0e-213	37.6
WP_041535454.1\|1608591_1609545_+	DnaJ domain-containing protein	A0A2L0UZR4	Agrobacterium_phage	9.0e-25	29.9
WP_041535455.1\|1609708_1611241_+	Do family serine endopeptidase	A0A1B1IT49	uncultured_Mediterranean_phage	2.2e-25	30.8

DBSCAN-SWA_4

1616899 : 1627142

Ectocarpus_siliculosus_virus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013300662.1\|1616899_1619164_-	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	7.6e-22	30.1
WP_013300663.1\|1619258_1620968_-	alkaline phosphatase D family protein	NA	NA	NA	NA
WP_013300664.1\|1621276_1622455_+	type III PLP-dependent enzyme	M1HQP3	Paramecium_bursaria_Chlorella_virus	4.1e-27	32.0
WP_013300665.1\|1622451_1622895_+	adenosylmethionine decarboxylase	A0A1D8KR70	Synechococcus_phage	6.9e-12	40.6
WP_013300666.1\|1622891_1623782_+	polyamine aminopropyltransferase	A0A1C9C533	Heterosigma_akashiwo_virus	3.2e-16	32.6
WP_013300667.1\|1623844_1624345_-	dihydrofolate reductase	A0A0K2QQK4	Ralstonia_phage	4.0e-24	44.1
WP_013300668.1\|1624341_1625136_-	thymidylate synthase	A6M9A2	Geobacillus_virus	6.6e-106	66.3
WP_013300669.1\|1625233_1625479_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013300670.1\|1626075_1626525_-	cytochrome c family protein	NA	NA	NA	NA
WP_041534947.1\|1626608_1627142_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.7e-17	35.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage