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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_020908 Octadecabacter arcticus 238, complete sequence 0 crisprs cas3,DEDDh,csa3,WYL,RT 0 0 55 0
NC_020909 Octadecabacter arcticus 238 plasmid pOA238_118, complete sequence 0 crisprs NA 0 0 1 0
NC_020910 Octadecabacter arcticus 238 plasmid pOA238_160, complete sequence 0 crisprs NA 0 0 2 0

Results visualization

1. NC_020908
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 20580 : 88508 60 Planktothrix_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_2 244067 : 291022 40 Bodo_saltans_virus(22.22%) tRNA,transposase,protease NA
DBSCAN-SWA_3 305350 : 341647 30 Shigella_phage(28.57%) transposase NA
DBSCAN-SWA_4 385353 : 422451 32 Catovirus(33.33%) holin,transposase NA
DBSCAN-SWA_5 526680 : 653188 113 Catovirus(16.67%) transposase,holin,tRNA,protease NA
DBSCAN-SWA_6 666505 : 720087 52 Mycobacterium_phage(38.46%) transposase,integrase,tRNA attL 658744:658763|attR 706984:707003
DBSCAN-SWA_7 737546 : 782801 39 Only_Syngen_Nebraska_virus(20.0%) transposase,integrase,protease attL 735153:735169|attR 761994:762010
DBSCAN-SWA_8 788410 : 844401 48 Mycobacterium_phage(33.33%) transposase NA
DBSCAN-SWA_9 866593 : 928096 49 Shigella_phage(16.67%) transposase NA
DBSCAN-SWA_10 957223 : 992165 28 Shigella_phage(20.0%) transposase,integrase attL 956784:956798|attR 992600:992614
DBSCAN-SWA_11 1004888 : 1060189 56 Klosneuvirus(25.0%) integrase,lysis,transposase,tRNA,protease attL 1026736:1026757|attR 1050067:1050088
DBSCAN-SWA_12 1074918 : 1189369 107 uncultured_Mediterranean_phage(22.73%) portal,transposase,tail,tRNA,protease,head NA
DBSCAN-SWA_13 1196924 : 1264732 59 Lactococcus_phage(36.36%) holin,transposase,tRNA NA
DBSCAN-SWA_14 1313432 : 1445385 107 Shigella_phage(17.39%) transposase,integrase,tRNA attL 1311449:1311508|attR 1409674:1410414
DBSCAN-SWA_15 1463713 : 1515253 41 Stx2-converting_phage(26.67%) transposase,integrase attL 1472844:1472859|attR 1499263:1499278
DBSCAN-SWA_16 1532462 : 1604174 54 Corynebacterium_phage(25.0%) transposase,protease NA
DBSCAN-SWA_17 1607424 : 1665167 51 Shigella_phage(26.67%) transposase,integrase attL 1611765:1611814|attR 1666037:1666086
DBSCAN-SWA_18 1678424 : 1755538 58 Shigella_phage(17.65%) transposase,integrase attL 1721995:1722010|attR 1752356:1752371
DBSCAN-SWA_19 1763354 : 1824951 53 Shigella_phage(18.18%) transposase,integrase attL 1749793:1749810|attR 1823440:1823457
DBSCAN-SWA_20 1829177 : 1892136 56 Stx2-converting_phage(29.41%) transposase,integrase attL 1829081:1829140|attR 1888465:1889636
DBSCAN-SWA_21 1923889 : 1978444 56 Stx2-converting_phage(22.22%) transposase,integrase attL 1970118:1970134|attR 1988709:1988725
DBSCAN-SWA_22 2007045 : 2267364 226 Shigella_phage(12.96%) holin,transposase,integrase,tRNA attL 2145156:2145173|attR 2259407:2259520
DBSCAN-SWA_23 2278673 : 2337551 55 Acinetobacter_phage(16.67%) transposase,tRNA,protease NA
DBSCAN-SWA_24 2414369 : 2537944 103 Shigella_phage(19.05%) transposase,tRNA,integrase attL 2452162:2452177|attR 2549614:2549712
DBSCAN-SWA_25 2547195 : 2609324 56 Micromonas_sp._RCC1109_virus(21.43%) transposase,integrase attL 2535305:2535327|attR 2599536:2599558
DBSCAN-SWA_26 2615020 : 2669842 54 Staphylococcus_phage(15.38%) protease,transposase,integrase,tRNA attL 2623690:2623705|attR 2641198:2641213
DBSCAN-SWA_27 2692028 : 2835025 116 Bacillus_virus(11.11%) holin,transposase,integrase,tRNA attL 2797076:2797100|attR 2805742:2805766
DBSCAN-SWA_28 2894666 : 2959301 59 Orpheovirus(20.0%) transposase NA
DBSCAN-SWA_29 2972192 : 3025431 49 uncultured_Mediterranean_phage(27.27%) transposase NA
DBSCAN-SWA_30 3068614 : 3091450 16 Mycobacterium_phage(57.14%) transposase,integrase attL 3080636:3080651|attR 3086694:3086709
DBSCAN-SWA_31 3099432 : 3225121 114 Bacillus_virus(19.05%) transposase,integrase,tRNA attL 3105722:3105781|attR 3197768:3197866
DBSCAN-SWA_32 3234338 : 3291389 51 Burkholderia_phage(40.0%) protease,transposase,integrase,tRNA attL 3234233:3234292|attR 3281058:3281727
DBSCAN-SWA_33 3307633 : 3358498 46 Planktothrix_phage(18.18%) protease,transposase,integrase,tRNA attL 3303930:3303946|attR 3366621:3366637
DBSCAN-SWA_34 3449080 : 3488540 25 Shigella_phage(33.33%) transposase NA
DBSCAN-SWA_35 3545906 : 3587027 42 Only_Syngen_Nebraska_virus(33.33%) tRNA,transposase,protease NA
DBSCAN-SWA_36 3595561 : 3709447 85 Streptococcus_phage(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_37 3778423 : 3807891 34 Anomala_cuprea_entomopoxvirus(25.0%) transposase,tRNA NA
DBSCAN-SWA_38 3818953 : 3929086 108 Escherichia_phage(13.33%) tRNA,transposase,protease NA
DBSCAN-SWA_39 3940364 : 3983908 43 Planktothrix_phage(14.29%) transposase NA
DBSCAN-SWA_40 4019094 : 4072293 51 uncultured_Caudovirales_phage(18.18%) transposase,integrase attL 4044906:4044927|attR 4077303:4077324
DBSCAN-SWA_41 4085930 : 4116426 43 uncultured_Caudovirales_phage(18.18%) portal,holin,terminase,transposase,head NA
DBSCAN-SWA_42 4147981 : 4199737 48 Leptospira_phage(18.18%) transposase,integrase attL 4144373:4144432|attR 4182978:4184180
DBSCAN-SWA_43 4218848 : 4267752 50 Staphylococcus_phage(15.38%) transposase,integrase attL 4256777:4256836|attR 4268536:4269378
DBSCAN-SWA_44 4319855 : 4380446 56 Mycobacterium_phage(33.33%) transposase,tRNA,integrase attL 4344024:4344039|attR 4390380:4390395
DBSCAN-SWA_45 4410394 : 4442470 30 Lactococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_46 4452494 : 4511462 50 Staphylococcus_phage(30.0%) transposase,integrase attL 4453946:4453966|attR 4517618:4517638
DBSCAN-SWA_47 4515884 : 4579456 50 Streptococcus_phage(10.0%) transposase,integrase attL 4554259:4554318|attR 4579697:4580015
DBSCAN-SWA_48 4595345 : 4664285 47 Mycobacterium_phage(38.46%) transposase,integrase attL 4649642:4649658|attR 4661388:4661404
DBSCAN-SWA_49 4674994 : 4739659 57 Bacillus_phage(23.08%) protease,transposase,integrase,tRNA attL 4675413:4675440|attR 4739173:4739200
DBSCAN-SWA_50 4746477 : 4811604 53 Planktothrix_phage(16.67%) holin,transposase NA
DBSCAN-SWA_51 4823403 : 4876832 49 Lactococcus_phage(25.0%) transposase,integrase attL 4808653:4808669|attR 4883684:4883700
DBSCAN-SWA_52 4897963 : 4959122 44 Shigella_phage(28.57%) coat,transposase,integrase attL 4922622:4922681|attR 4967569:4967952
DBSCAN-SWA_53 4969344 : 5009266 36 Staphylococcus_phage(14.29%) transposase,integrase,tRNA attL 4972686:4972699|attR 5003102:5003115
DBSCAN-SWA_54 5041454 : 5103094 49 Escherichia_phage(16.67%) integrase,holin,transposase,tRNA,protease attL 5033226:5033242|attR 5073097:5073113
DBSCAN-SWA_55 5118702 : 5167606 38 Stx2-converting_phage(30.77%) transposase,integrase attL 5117873:5117888|attR 5157290:5157305

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_020909
Click the left colored region to show detailed information

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 80289 : 102543 19 Burkholderia_phage(50.0%) transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NC_020910
Click the left colored region to show detailed information

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5353 : 62228 49 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_2 71931 : 122982 45 Staphylococcus_phage(33.33%) transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage