Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_015701 Lactobacillus reuteri SD2112 plasmid pLR584, complete sequence 0 crisprs RT,csa3 0 0 0 0
NC_015698 Lactobacillus reuteri SD2112 plasmid pLR585, complete sequence 0 crisprs NA 0 0 0 0
NC_015697 Lactobacillus reuteri SD2112, complete sequence 0 crisprs RT,cas14j,cas3,csa3,DEDDh,DinG 0 0 87 0
NC_015699 Lactobacillus reuteri SD2112 plasmid pLR580, complete sequence 0 crisprs NA 0 0 0 0
NC_015700 Lactobacillus reuteri SD2112 plasmid pLR581, complete sequence 0 crisprs csa3 0 0 0 0

Results visualization

1. NC_015697
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 71935 49 Bacillus_phage(16.67%) transposase,integrase attL 14077:14136|attR 39659:40253
DBSCAN-SWA_2 77526 : 77685 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_3 90523 : 147394 51 Streptococcus_phage(20.0%) transposase NA
DBSCAN-SWA_4 161412 : 162114 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_5 170707 : 224264 53 Streptococcus_phage(16.67%) protease,tRNA,transposase NA
DBSCAN-SWA_6 227750 : 228161 1 Caulobacter_phage(100.0%) NA NA
DBSCAN-SWA_7 231497 : 233672 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_8 242164 : 251816 9 Agrobacterium_phage(20.0%) transposase NA
DBSCAN-SWA_9 255075 : 263206 10 Aeromonas_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_10 271405 : 344159 59 Enterococcus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_11 349169 : 351978 3 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_12 356830 : 365055 4 Lactobacillus_phage(33.33%) transposase NA
DBSCAN-SWA_13 370668 : 376639 5 Escherichia_phage(60.0%) NA NA
DBSCAN-SWA_14 389804 : 390923 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_15 394399 : 398951 3 Lactobacillus_prophage(50.0%) NA NA
DBSCAN-SWA_16 408926 : 553986 146 Erysipelothrix_phage(57.75%) holin,tail,tRNA,integrase,head,protease,portal,capsid,terminase,transposase attL 482834:482859|attR 523836:523861
DBSCAN-SWA_17 568599 : 612118 33 Streptococcus_phage(18.18%) protease,transposase NA
DBSCAN-SWA_18 617943 : 689023 57 Streptococcus_phage(30.0%) transposase NA
DBSCAN-SWA_19 694095 : 698316 3 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_20 703931 : 757182 43 Streptococcus_phage(23.08%) protease,transposase,integrase attL 721086:721145|attR 769741:769857
DBSCAN-SWA_21 768761 : 829162 57 Streptococcus_phage(22.22%) transposase NA
DBSCAN-SWA_22 833909 : 834323 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_23 838880 : 839762 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_24 843055 : 884302 37 unidentified_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_25 931094 : 1123915 168 unidentified_phage(15.25%) tRNA,transposase,integrase attL 988331:988350|attR 1005563:1005582
DBSCAN-SWA_26 1128391 : 1136730 7 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_27 1141415 : 1159225 14 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_28 1164071 : 1171228 6 unidentified_phage(33.33%) protease,transposase NA
DBSCAN-SWA_29 1181353 : 1185532 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_30 1193664 : 1194330 1 Alteromonas_phage(100.0%) NA NA
DBSCAN-SWA_31 1199243 : 1200110 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_32 1204263 : 1206732 2 Staphylococcus_virus(50.0%) NA NA
DBSCAN-SWA_33 1210724 : 1212107 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_34 1219907 : 1221290 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_35 1228688 : 1232173 3 Lactobacillus_phage(66.67%) NA NA
DBSCAN-SWA_36 1235253 : 1240330 4 uncultured_Mediterranean_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_37 1247042 : 1249665 3 Bifidobacterium_phage(66.67%) NA NA
DBSCAN-SWA_38 1254023 : 1265443 11 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_39 1269824 : 1270487 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_40 1275113 : 1341429 50 Prochlorococcus_phage(13.33%) tRNA,transposase,integrase attL 1323091:1323110|attR 1347215:1347234
DBSCAN-SWA_41 1354402 : 1366187 9 unidentified_phage(20.0%) protease,transposase NA
DBSCAN-SWA_42 1370559 : 1387491 14 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_43 1391361 : 1392806 2 Anguillid_herpesvirus(50.0%) NA NA
DBSCAN-SWA_44 1397403 : 1401500 3 Bacillus_phage(50.0%) tRNA NA
DBSCAN-SWA_45 1405459 : 1471766 58 unidentified_phage(10.0%) protease,tRNA,transposase NA
DBSCAN-SWA_46 1475377 : 1478318 3 unidentified_phage(50.0%) transposase NA
DBSCAN-SWA_47 1484806 : 1488142 2 unidentified_phage(50.0%) integrase attL 1481057:1481070|attR 1489205:1489218
DBSCAN-SWA_48 1495127 : 1502331 5 Lactococcus_phage(33.33%) transposase NA
DBSCAN-SWA_49 1509147 : 1511454 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_50 1514774 : 1518242 2 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_51 1523050 : 1533993 11 Pandoravirus(20.0%) tRNA NA
DBSCAN-SWA_52 1539538 : 1541645 2 unidentified_phage(50.0%) transposase NA
DBSCAN-SWA_53 1549001 : 1561802 15 Streptococcus_phage(44.44%) transposase NA
DBSCAN-SWA_54 1567583 : 1573187 6 Streptococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_55 1577564 : 1582626 4 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_56 1590491 : 1592520 2 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_57 1601260 : 1602175 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_58 1605521 : 1606454 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_59 1609501 : 1612659 2 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_60 1616163 : 1626186 6 Streptococcus_phage(40.0%) NA NA
DBSCAN-SWA_61 1629946 : 1631269 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_62 1635663 : 1643168 9 Lactococcus_phage(25.0%) tRNA NA
DBSCAN-SWA_63 1651786 : 1661151 8 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_64 1664780 : 1722604 54 Pseudomonas_phage(27.27%) protease,transposase NA
DBSCAN-SWA_65 1726781 : 1728206 1 Aichi_virus(100.0%) NA NA
DBSCAN-SWA_66 1732792 : 1737315 5 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_67 1741144 : 1741894 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_68 1749670 : 1763969 9 Pacmanvirus(20.0%) tRNA,transposase NA
DBSCAN-SWA_69 1769963 : 1770614 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_70 1777449 : 1854861 69 Bacillus_phage(17.65%) tRNA,transposase NA
DBSCAN-SWA_71 1858392 : 1860723 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_72 1875219 : 1878015 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_73 1884122 : 1887644 2 Virus_Rctr197k(50.0%) NA NA
DBSCAN-SWA_74 2015973 : 2019220 4 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_75 2026054 : 2027068 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_76 2033102 : 2036112 2 Helicobacter_phage(50.0%) NA NA
DBSCAN-SWA_77 2040771 : 2057017 13 Streptomyces_phage(16.67%) integrase,transposase attL 2034777:2034794|attR 2060740:2060757
DBSCAN-SWA_78 2061509 : 2074596 14 Staphylococcus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_79 2079674 : 2178863 111 Lactobacillus_phage(65.31%) tail,head,protease,plate,portal,capsid,terminase,transposase NA
DBSCAN-SWA_80 2189928 : 2191903 2 Lactococcus_phage(100.0%) transposase NA
DBSCAN-SWA_81 2197991 : 2202256 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_82 2205549 : 2206164 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_83 2210084 : 2212273 4 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_84 2216040 : 2226416 8 Staphylococcus_phage(40.0%) NA NA
DBSCAN-SWA_85 2233553 : 2239898 6 Ostreococcus_tauri_virus(33.33%) NA NA
DBSCAN-SWA_86 2252628 : 2253111 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_87 2256534 : 2263660 5 unidentified_phage(33.33%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage