CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_016630	Filifactor alocis ATCC 35896, complete sequence	2 crisprs	cas5,cas8c,cas7,cas4,cas1,cas2,csa3,cas3,csn2,cas9,PD-DExK,csx20,DEDDh,WYL	0	20	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_016630_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016630_1

41422-43820

TypeI

I-C

Consensus_repeat	Method
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	PILER-CR
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CRT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	PILER-CR
TGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTAT	PILER-CR

35 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NC_016630_1

>merge|NC_016630|1|41422-43820|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTCGCGTCCCACAGGGGCGCGTGGATTGAAATATAACCTCACCGAATCCATCAATCAAAGAGGATTGGTCGCGTCCCACAGGGGCGCGTGGATTGAAATGTTTGAATCTGCTATGAAAAGCCTAACTGATTGCAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTTTTTACATTTTTTACATTTTACATATACTTTTTGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCACCAATGCAACTCCTCGATGTTTAAGTCTATCCCGTAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATAAATAAAATTGATACTCTAAAATCGCTTGAGATTGGGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTGAGACGATTGAAAACCTAAACGGACAGCCTGCATGTCGCGTCCCACAGGGGCGCGTGGATTGAAATGTTTTCTGTTCCAGTAATCTTATATCCAAATTTCCGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCAGATCAATCAGCTATTTTGACAAAATAGTATATGGGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTTTATTGCACCTCTCTTCCAGTGTATCAAGTCTGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCAATTTATGAATTCTATCGGGATTCGGAAAATCAAAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCGGTAATATTCAAAGAAACACCCTGAAATGTATGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTTATATCTATCCTGATCGTCTACTCTCGAGTGGTCGCGTCCCACAGGGGCGCGTGGATTGAAATGTTCATAAATCACCTCTTAATATAAAATATGAGCAACGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCTGTTAAAACAATTGATTCTTCAATATTTCCATCGGTCGCGTCCCACAGGGGCGCGTGGATTGAAATAATAACATTGTCTTCGATATCCGCCAACGTAATATCGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCAAATTGACCGTATCATTGCGGGATTTGGTGGAATTGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTACCATAGAGTTCGGATACTGTGAGAGTGAGAGGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTTTAGCGGATAACATATTGACTTCTTCATACATCTGCCGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTACAATCATACTTGCGTTATCAGGCATATACGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTAATCATCGCTAAATTCCATAACTCTACTGTAGGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCATACACCAAAAAGGTTTTGCCGTCTAAAATATATAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCGGAGTACTGTCCTGCTTTACCTGCTTGGCCTAAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATGCTTATCAACAATCAAGAGGTGGACGAAGAGGTGGCGGTGGACGTCGCGTCCCACAGGGGCGCGTGGATTGAAATAAATCCTCTCCGTTTCCCAGCAACTGAAAAAGCTTGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTTGCCTCTGCTAAAGTTACTGGCATAATAAATCATCCGTCGCGTCCCACAGGGGCGCGTGGATTGAAATGTTGCGTCTTGCAAGTTCGTTGATAGCTTCCTCGTGTCGCGTCCCACAGGGGCGCGTGGATTGAAATACTTATTGCTGTTTTATCCATTGTGTCTGATTTTTGAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTGTTGATATGTCAGATGTCGGAAGTAATACAACAAAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATAGCAAATTCTTAGCCGGAACGTATATTAATATGGCAACGTCGCGTCCCACAGGGGCGCGTGGATTGAAATGCAATACACCCATGAAAGTTTTGTTGCCGGAACGGTATGTCGCGTCCCATAGGGGCGCGTGGGTTGAAATTTTTTTACAAAACGTATTAAATCTATCACTTTCGTCGCGTCCCATAGGGGCGCGTGGGTTGAAATATTTGTTTTTATGTCATTTGTAGTTTTAACATTAAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCGTTCGTGCAACGGCTAAAGGGTTTGCGGTCGGTGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTCTCTTACAATTTCCAGTTCAGATTTTGGAATTTGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTATGAAAGATAGAAAAAGGGGTTTTGAAAAAATGTGTCATGTCCCATAGGGGCACGTGGATTTGAAA

>NC_016630|1|1|41422-42129|PILER-CR
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	ATAACCTCACCGAATCCATCAATCAAAGAGGATTG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTTGAATCTGCTATGAAAAGCCTAACTGATTGCA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTTTACATTTTTTACATTTTACATATACTTTTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CACCAATGCAACTCCTCGATGTTTAAGTCTATCCCGTA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AAATAAAATTGATACTCTAAAATCGCTTGAGATTGG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTGAGACGATTGAAAACCTAAACGGACAGCCTGCAT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTTTCTGTTCCAGTAATCTTATATCCAAATTTCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAGATCAATCAGCTATTTTGACAAAATAGTATATGG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTATTGCACCTCTCTTCCAGTGTATCAAGTCT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAATTTATGAATTCTATCGGGATTCGGAAAATCAAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAATCGGTAATATTCAAAGAAACACCCTGAAATGTATGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTTATATCTATCCTGATCGTCTACTCTCGAGTGGTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTCATAAATCACCTCTTAATATAAAATATGAGCAAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CTGTTAAAACAATTGATTCTTCAATATTTCCATCG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AATAACATTGTCTTCGATATCCGCCAACGTAATATC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAAATTGACCGTATCATTGCGGGATTTGGTGGAATT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TACCATAGAGTTCGGATACTGTGAGAGTGAGAG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTAGCGGATAACATATTGACTTCTTCATACATCTGCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTACAATCATACTTGCGTTATCAGGCATATAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTAATCATCGCTAAATTCCATAACTCTACTGTAG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CATACACCAAAAAGGTTTTGCCGTCTAAAATATATA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CGGAGTACTGTCCTGCTTTACCTGCTTGGCCTAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GCTTATCAACAATCAAGAGGTGGACGAAGAGGTGGCGGTGGAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AAATCCTCTCCGTTTCCCAGCAACTGAAAAAGCTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTGCCTCTGCTAAAGTTACTGGCATAATAAATCATCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTGCGTCTTGCAAGTTCGTTGATAGCTTCCTCGT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	ACTTATTGCTGTTTTATCCATTGTGTCTGATTTTTGA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TGTTGATATGTCAGATGTCGGAAGTAATACAACAAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AGCAAATTCTTAGCCGGAACGTATATTAATATGGCAAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAATGCAATACACCCATGAAAGTTTTGTTGCCGGAACGGTATGTCGCGTCCCATAGGGGCGCGTGGGTTGAAATTTTTTTACAAAACGTATTAAATCTATCACTTTCGTCGCGTCCCATAGGGGCGCGTGGGTTGAAATATTTGTTTTTATGTCATTTGTAGTTTTAACATTAAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCGTTC	GTGCAACGGCTAAAGGGTTTGCGGTCGGTGTCG
CGTCCCACAGGGGCGCGTGGATTGAAATTTCTCTTAC	AATTTCCAGTTCAGATTTTGGAATTTGTCG


>NC_016630|1|1|41422-43820|CRISPRCasFinder
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	ATAACCTCACCGAATCCATCAATCAAAGAGGATTG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTTGAATCTGCTATGAAAAGCCTAACTGATTGCA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTTTACATTTTTTACATTTTACATATACTTTTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CACCAATGCAACTCCTCGATGTTTAAGTCTATCCCGTA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AAATAAAATTGATACTCTAAAATCGCTTGAGATTGG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTGAGACGATTGAAAACCTAAACGGACAGCCTGCAT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTTTCTGTTCCAGTAATCTTATATCCAAATTTCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAGATCAATCAGCTATTTTGACAAAATAGTATATGG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTATTGCACCTCTCTTCCAGTGTATCAAGTCT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAATTTATGAATTCTATCGGGATTCGGAAAATCAAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CGGTAATATTCAAAGAAACACCCTGAAATGTAT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTATATCTATCCTGATCGTCTACTCTCGAGTG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTCATAAATCACCTCTTAATATAAAATATGAGCAAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CTGTTAAAACAATTGATTCTTCAATATTTCCATCG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AATAACATTGTCTTCGATATCCGCCAACGTAATATC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAAATTGACCGTATCATTGCGGGATTTGGTGGAATT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TACCATAGAGTTCGGATACTGTGAGAGTGAGAG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTAGCGGATAACATATTGACTTCTTCATACATCTGCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTACAATCATACTTGCGTTATCAGGCATATAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTAATCATCGCTAAATTCCATAACTCTACTGTAG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CATACACCAAAAAGGTTTTGCCGTCTAAAATATATA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CGGAGTACTGTCCTGCTTTACCTGCTTGGCCTAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GCTTATCAACAATCAAGAGGTGGACGAAGAGGTGGCGGTGGAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AAATCCTCTCCGTTTCCCAGCAACTGAAAAAGCTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTGCCTCTGCTAAAGTTACTGGCATAATAAATCATCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTGCGTCTTGCAAGTTCGTTGATAGCTTCCTCGT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	ACTTATTGCTGTTTTATCCATTGTGTCTGATTTTTGA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TGTTGATATGTCAGATGTCGGAAGTAATACAACAAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AGCAAATTCTTAGCCGGAACGTATATTAATATGGCAAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GCAATACACCCATGAAAGTTTTGTTGCCGGAACGGTAT
GTCGCGTCCCATAGGGGCGCGTGGGTTGAAAT	TTTTTTACAAAACGTATTAAATCTATCACTTTC
GTCGCGTCCCATAGGGGCGCGTGGGTTGAAAT	ATTTGTTTTTATGTCATTTGTAGTTTTAACATTAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CGTTCGTGCAACGGCTAAAGGGTTTGCGGTCGGT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTCTCTTACAATTTCCAGTTCAGATTTTGGAATTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTATGAAAGATAGAAAAAGGGGTTTTGAAAAAATGT
GTCATGTCCCATAGGGGCACGTGGATTTGAAA

>NC_016630|1|1|41422-43820|CRT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	ATAACCTCACCGAATCCATCAATCAAAGAGGATTG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTTGAATCTGCTATGAAAAGCCTAACTGATTGCA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTTTACATTTTTTACATTTTACATATACTTTTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CACCAATGCAACTCCTCGATGTTTAAGTCTATCCCGTA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AAATAAAATTGATACTCTAAAATCGCTTGAGATTGG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTGAGACGATTGAAAACCTAAACGGACAGCCTGCAT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTTTCTGTTCCAGTAATCTTATATCCAAATTTCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAGATCAATCAGCTATTTTGACAAAATAGTATATGG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTATTGCACCTCTCTTCCAGTGTATCAAGTCT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAATTTATGAATTCTATCGGGATTCGGAAAATCAAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CGGTAATATTCAAAGAAACACCCTGAAATGTAT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTATATCTATCCTGATCGTCTACTCTCGAGTG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTCATAAATCACCTCTTAATATAAAATATGAGCAAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CTGTTAAAACAATTGATTCTTCAATATTTCCATCG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AATAACATTGTCTTCGATATCCGCCAACGTAATATC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAAATTGACCGTATCATTGCGGGATTTGGTGGAATT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TACCATAGAGTTCGGATACTGTGAGAGTGAGAG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTAGCGGATAACATATTGACTTCTTCATACATCTGCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTACAATCATACTTGCGTTATCAGGCATATAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTAATCATCGCTAAATTCCATAACTCTACTGTAG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CATACACCAAAAAGGTTTTGCCGTCTAAAATATATA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CGGAGTACTGTCCTGCTTTACCTGCTTGGCCTAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GCTTATCAACAATCAAGAGGTGGACGAAGAGGTGGCGGTGGAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AAATCCTCTCCGTTTCCCAGCAACTGAAAAAGCTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTGCCTCTGCTAAAGTTACTGGCATAATAAATCATCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTGCGTCTTGCAAGTTCGTTGATAGCTTCCTCGT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	ACTTATTGCTGTTTTATCCATTGTGTCTGATTTTTGA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TGTTGATATGTCAGATGTCGGAAGTAATACAACAAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AGCAAATTCTTAGCCGGAACGTATATTAATATGGCAAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GCAATACACCCATGAAAGTTTTGTTGCCGGAACGGTAT
GTCGCGTCCCATAGGGGCGCGTGGGTTGAAAT	TTTTTTACAAAACGTATTAAATCTATCACTTTC
GTCGCGTCCCATAGGGGCGCGTGGGTTGAAAT	ATTTGTTTTTATGTCATTTGTAGTTTTAACATTAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CGTTCGTGCAACGGCTAAAGGGTTTGCGGTCGGT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTCTCTTACAATTTCCAGTTCAGATTTTGGAATTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTATGAAAGATAGAAAAAGGGGTTTTGAAAAAATGT
GTCATGTCCCATAGGGGCACGTGGATTTGAAA

>NC_016630|1|2|42228-43417|PILER-CR
	ATAACCTCACCGAATCCATCAATCAAAGAGGATTG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTTGAATCTGCTATGAAAAGCCTAACTGATTGCA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTTTACATTTTTTACATTTTACATATACTTTTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CACCAATGCAACTCCTCGATGTTTAAGTCTATCCCGTA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AAATAAAATTGATACTCTAAAATCGCTTGAGATTGG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTGAGACGATTGAAAACCTAAACGGACAGCCTGCAT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTTTCTGTTCCAGTAATCTTATATCCAAATTTCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAGATCAATCAGCTATTTTGACAAAATAGTATATGG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTATTGCACCTCTCTTCCAGTGTATCAAGTCT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAATTTATGAATTCTATCGGGATTCGGAAAATCAAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAATCGGTAATATTCAAAGAAACACCCTGAAATGTATGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTTATATCTATCCTGATCGTCTACTCTCGAGTGGTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTCATAAATCACCTCTTAATATAAAATATGAGCAAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CTGTTAAAACAATTGATTCTTCAATATTTCCATCG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AATAACATTGTCTTCGATATCCGCCAACGTAATATC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAAATTGACCGTATCATTGCGGGATTTGGTGGAATT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TACCATAGAGTTCGGATACTGTGAGAGTGAGAG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTAGCGGATAACATATTGACTTCTTCATACATCTGCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTACAATCATACTTGCGTTATCAGGCATATAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTAATCATCGCTAAATTCCATAACTCTACTGTAG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CATACACCAAAAAGGTTTTGCCGTCTAAAATATATA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CGGAGTACTGTCCTGCTTTACCTGCTTGGCCTAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GCTTATCAACAATCAAGAGGTGGACGAAGAGGTGGCGGTGGAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AAATCCTCTCCGTTTCCCAGCAACTGAAAAAGCTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTGCCTCTGCTAAAGTTACTGGCATAATAAATCATCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTGCGTCTTGCAAGTTCGTTGATAGCTTCCTCGT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	ACTTATTGCTGTTTTATCCATTGTGTCTGATTTTTGA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TGTTGATATGTCAGATGTCGGAAGTAATACAACAAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AGCAAATTCTTAGCCGGAACGTATATTAATATGGCAAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAATGCAATACACCCATGAAAGTTTTGTTGCCGGAACGGTATGTCGCGTCCCATAGGGGCGCGTGGGTTGAAATTTTTTTACAAAACGTATTAAATCTATCACTTTCGTCGCGTCCCATAGGGGCGCGTGGGTTGAAATATTTGTTTTTATGTCATTTGTAGTTTTAACATTAAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCGTTC	GTGCAACGGCTAAAGGGTTTGCGGTCGGTGTCG
CGTCCCACAGGGGCGCGTGGATTGAAATTTCTCTTAC	AATTTCCAGTTCAGATTTTGGAATTTGTCG


>NC_016630|1|3|43588-43756|PILER-CR
	ATAACCTCACCGAATCCATCAATCAAAGAGGATTG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTTGAATCTGCTATGAAAAGCCTAACTGATTGCA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTTTACATTTTTTACATTTTACATATACTTTTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CACCAATGCAACTCCTCGATGTTTAAGTCTATCCCGTA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AAATAAAATTGATACTCTAAAATCGCTTGAGATTGG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTGAGACGATTGAAAACCTAAACGGACAGCCTGCAT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTTTCTGTTCCAGTAATCTTATATCCAAATTTCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAGATCAATCAGCTATTTTGACAAAATAGTATATGG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTATTGCACCTCTCTTCCAGTGTATCAAGTCT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAATTTATGAATTCTATCGGGATTCGGAAAATCAAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAATCGGTAATATTCAAAGAAACACCCTGAAATGTATGTCGCGTCCCACAGGGGCGCGTGGATTGAAATTTTATATCTATCCTGATCGTCTACTCTCGAGTGGTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTCATAAATCACCTCTTAATATAAAATATGAGCAAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CTGTTAAAACAATTGATTCTTCAATATTTCCATCG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AATAACATTGTCTTCGATATCCGCCAACGTAATATC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CAAATTGACCGTATCATTGCGGGATTTGGTGGAATT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TACCATAGAGTTCGGATACTGTGAGAGTGAGAG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTTAGCGGATAACATATTGACTTCTTCATACATCTGCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTACAATCATACTTGCGTTATCAGGCATATAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTAATCATCGCTAAATTCCATAACTCTACTGTAG
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CATACACCAAAAAGGTTTTGCCGTCTAAAATATATA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	CGGAGTACTGTCCTGCTTTACCTGCTTGGCCTAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GCTTATCAACAATCAAGAGGTGGACGAAGAGGTGGCGGTGGAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AAATCCTCTCCGTTTCCCAGCAACTGAAAAAGCTT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TTTGCCTCTGCTAAAGTTACTGGCATAATAAATCATCC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	GTTGCGTCTTGCAAGTTCGTTGATAGCTTCCTCGT
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	ACTTATTGCTGTTTTATCCATTGTGTCTGATTTTTGA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	TGTTGATATGTCAGATGTCGGAAGTAATACAACAAA
GTCGCGTCCCACAGGGGCGCGTGGATTGAAAT	AGCAAATTCTTAGCCGGAACGTATATTAATATGGCAAC
GTCGCGTCCCACAGGGGCGCGTGGATTGAAATGCAATACACCCATGAAAGTTTTGTTGCCGGAACGGTATGTCGCGTCCCATAGGGGCGCGTGGGTTGAAATTTTTTTACAAAACGTATTAAATCTATCACTTTCGTCGCGTCCCATAGGGGCGCGTGGGTTGAAATATTTGTTTTTATGTCATTTGTAGTTTTAACATTAAGTCGCGTCCCACAGGGGCGCGTGGATTGAAATCGTTC	GTGCAACGGCTAAAGGGTTTGCGGTCGGTGTCG
CGTCCCACAGGGGCGCGTGGATTGAAATTTCTCTTAC	AATTTCCAGTTCAGATTTTGGAATTTGTCG
CGTCCCACAGGGGCGCGTGGATTGAAATTTAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_016630.1\|WP_014261709.1\|36516_38439_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|187887
NC_016630.1\|WP_014261715.1\|44793_45030_+\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_041250723.1\|30567_31431_+\|bifunctional-5,10-methylene-tetrahydrofolate-dehydrogenase/5,10-methylene-tetrahydrofolate-cyclohydrolase	unknown	unknown	gnl\|CDD\|184560
NC_016630.1\|WP_014261711.1\|39276_39930_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NC_016630.1\|WP_041250885.1\|35794_36520_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NC_016630.1\|WP_014261713.1\|40961_41255_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NC_016630.1\|WP_014261712.1\|39926_40958_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_016630.1\|WP_014261724.1\|52315_52549_+\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_014261719.1\|47725_48520_+\|DUF4261-domain-containing-protein	unknown	unknown	gnl\|CDD\|379456
NC_016630.1\|WP_014261716.1\|45169_45907_+\|DUF4241-domain-containing-protein	unknown	unknown	gnl\|CDD\|379427
NC_016630.1\|WP_041250722.1\|28478_30200_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NC_016630.1\|WP_156775211.1\|48767_49238_+\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_014261721.1\|49382_49889_+\|YfbM-family-protein	unknown	unknown	gnl\|CDD\|378105
NC_016630.1\|WP_156775271.1\|46203_46608_+\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_041250884.1\|32116_32641_+\|folate-family-ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|275311
NC_016630.1\|WP_041250724.1\|38425_39274_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NC_016630.1\|WP_014261707.1\|33000_35589_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_016630.1\|WP_014261718.1\|46919_47477_+\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_041250888.1\|50500_50914_+\|very-short-patch-repair-endonuclease	unknown	unknown	gnl\|CDD\|238136
NC_016630.1\|WP_014261723.1\|50917_52045_+\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|273211

Protein	Function_ID	Function_description	E-value
NC_016630.1\|WP_014261709.1\|36516_38439_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	7.47611e-74
NC_016630.1\|WP_041250723.1\|30567_31431_+\|bifunctional-5,10-methylene-tetrahydrofolate-dehydrogenase/5,10-methylene-tetrahydrofolate-cyclohydrolase	gnl\|CDD\|184560	PRK14190, PRK14190, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional.	2.02466e-110
NC_016630.1\|WP_014261711.1\|39276_39930_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.60406e-29
NC_016630.1\|WP_041250885.1\|35794_36520_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	5.94025e-72
NC_016630.1\|WP_014261713.1\|40961_41255_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.65969e-32
NC_016630.1\|WP_014261712.1\|39926_40958_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	5.17413e-173
NC_016630.1\|WP_014261719.1\|47725_48520_+\|DUF4261-domain-containing-protein	gnl\|CDD\|379456	pfam14080, DUF4261, Domain of unknown function (DUF4261). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 80 amino acids in length.	1.94222e-21
NC_016630.1\|WP_014261716.1\|45169_45907_+\|DUF4241-domain-containing-protein	gnl\|CDD\|379427	pfam14025, DUF4241, Protein of unknown function (DUF4241). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 205 and 315 amino acids in length. There is a conserved GDG sequence motif at the C-terminus.	8.27328e-63
NC_016630.1\|WP_041250722.1\|28478_30200_+\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NC_016630.1\|WP_014261721.1\|49382_49889_+\|YfbM-family-protein	gnl\|CDD\|378105	pfam08974, DUF1877, Domain of unknown function (DUF1877). This domain is found in a set of hypothetical bacterial proteins.	1.4992e-45
NC_016630.1\|WP_041250884.1\|32116_32641_+\|folate-family-ECF-transporter-S-component	gnl\|CDD\|275311	TIGR04518, conserved_hypothetical_protein, ECF transporter S component, folate family. Members of this model are the multiple membrane-spanning S (specificity) component of ECF (energy coupling factor) type uptake transporters. All seed members were found in the vicinity of the bifunctional enzyme folC, involved in making active cofactor from imported folate. However, some species have multiple members of this family, suggesting some diversity of function. [Transport and binding proteins, Unknown substrate].	7.72057e-24
NC_016630.1\|WP_041250724.1\|38425_39274_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	1.24801e-103
NC_016630.1\|WP_014261707.1\|33000_35589_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.25601e-56
NC_016630.1\|WP_041250888.1\|50500_50914_+\|very-short-patch-repair-endonuclease	gnl\|CDD\|238136	cd00221, Vsr, Very Short Patch Repair (Vsr) Endonuclease. Endonucleases in DNA repair that recognize damaged DNA and cleave the phosphodiester backbone. Vsr endonucleases have a common endonuclease topology that has been tailored for recognition of TG mismatches.	3.37678e-40
NC_016630.1\|WP_014261723.1\|50917_52045_+\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|273211	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm). All proteins in this family for which functions are known are DNA-cytosine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	4.60038e-65

>NC_016630.1|WP_014261713.1|40961_41255_+|CRISPR-associated-endonuclease-Cas2
MLVIIAYDVETSTQEGRTRLRKVAKLCVNYGQRVQNSVFECSVDPAQLVKIKHQLEKMIDPDSDNIRIYHMGKNWERKIETLGKSESYNPDSGVLFV
>NC_016630.1|WP_014261712.1|39926_40958_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYVTKEQAYLSKDGQNVVITEDGVQIGRYPIHILNDIICFSYLGVSPALMRLCSENNIGISFLTPQGQFCGRVIGKENGNVLLRREQYRMADSETSVGFVRNIIYAKGLNSKRILRRCLLDHKDKVNSKKFEENIAKIDGCLAKIKESDEKDTIRGYEGIVAKTYFDCFDELILQQKSDFYFNERSKRPPEDNVNSMLSLLYTLLAHDVGSALSAVGIDSYVGFMHTDRPGRMSMALDMMEELRGFMVDRTVLTMINLKIVKENDFEKKESGAVLIKDSGRKKIIEYWQKRKQTEIVHPYLKEKVKIGLLPHVQSMLLNRYIRGDLESYPPFIIKE
>NC_016630.1|WP_014261711.1|39276_39930_+|CRISPR-associated-protein-Cas4
MYNEDDYLMLSGIQHYYFCKRQWALIHIEQQWAENQSTMEGNYLHEKADMPFLKEKRRGFLMSRAVPVSSKRLGLSGVIDVIEFQKSDHGIKLNRHKGTWFPEIIEYKRGKEKPDERDIVQLCAQVICLEEKWDIKIDKSYLYYFKTNKRLEVSITDELRKKVIEISNDMHHLYHQQKIPPAEFFKNCQLCSLYDICMPRITKRKASVEHYLYEDET
>NC_016630.1|WP_041250724.1|38425_39274_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MMMNKVDFIMTFTVQNANVNGDPLSGNRPRMDSNGLGEVSDVCLKRKIRNRLQDNGNAIFVQSRERTEDGYTSLEKRYAAHFKKTMSDEEVEKGFHEKWIDVRAFGQVITYDKRSIGIRGPISIGIAKSLEPITIEDMQITKSVNGMEQKNPNDRAPDTLGMKHFVEFGTYVVHGAVNSYFAEKTGFNEKDLEEFKAALKTIFVNDASSARPDGSIEVKQIFWFEHSCKVGDVSSAKIKSLLKWDKEDKEHRCYEDYHIHIDENALKEYEKLGLKLTVIEGL
>NC_016630.1|WP_014261709.1|36516_38439_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSVLTNLLRCYEYSEKEGLVGEYNGNDAVLLPLYHQSITSKKNNVLKVTLDEEGQLLNAEFAVDGEVYLFPITEDSVARSSGVAPHPLEDKMQYCISKIADKKKIEAYRKEFDNFYDYAEHPKVKLFLNAVKLFLSNEKNYALILSKLPLKDIVETGKGKIKYTSEKNKKTEYDFKDTFVCFEVRCHNGSYLKVNTFSEMQEEFVSYIDDRYEREGTLSICNISGTKETITEKHRGLMGTAKVISVSNNKETYFGRFHNGSDIIRVGRKSSEKIHLMLKFLLENRNSHIHLADTLFLVNWFSGDIKNTMAFDLTGSDMDDDMEEEGKNPVSESNKEISRAFIRGTGKLNPEEQYYIMLVDKSSNGRMSIRYYKEMPNSQLIENLQSWQKKYIWEQWKQAKETYVEYVPSLHYILLASYGIERNKILVIDDGKFKKDQFQNLVTALVEGKSVPSNIKNALAQNIRNRQKYSEKWRFMLLVSLAILSEGRKEYQEMREESHQTRSYLYGRLLAIYEGLEEAVLRDQQRSSLASSDDSSKKSKIRATNALRYWNSFVNKPDTTMKTLELATKYCASYILSSNKPDYLVGVLIKTEKAKSEIFELLDTQENRKYKTNTQLDNDFIFGYYAQKKDLYTKKENDDE
>NC_016630.1|WP_041250885.1|35794_36520_+|type-I-C-CRISPR-associated-protein-Cas5
MEKSKHFYMRITGDYALWADPATKGGGERISYQVPTAQAIQGICDAVYFKPTIRNVVDAIKVVNPVRFHSMGYRALYGDLSAGLNYVTVLENVEYLVQYHFEWNLYRQDLSRDRIMKKHETITERSLRKGGRRDVFLGAREFLGYVEQITEQEYLTEKTFYYGSDFDLGNIFHSFIYSNDETEPLKSLFTHTIMRDGIIQIKPQEECEITNILSSYTIKAHKGVVSVDEELKEYGEGGESI
>NC_016630.1|WP_014261707.1|33000_35589_+|CRISPR-associated-helicase/endonuclease-Cas3
MHNSSNLLAHYDRENQKEQLLTNHLLNTATIASDIGKEIGMGNLCFLLGVLHDSGKADIQFQTMLKNMPGSKNIRVIHSTAGAYFLFETKYNRNLEDRKESKSYNEFIEVCMYVIEAHHGLFDIVGKRDEDGFSGMDYVNKIFERVEHYQADSRYDKEKLKHFIDNEVALIVKSELGFDSIEELIDSAFQEYHHIMEQFTKNYVPFESESEKNRKRNKNHKLKERRFFDMMLVRLLLSIIKTADVEDTINAYDFLIQRRTEEEIRCLKRHYIERIEGEYKKYHRNNNATKPINQMRNQIADTLLVKGQQDNAGIYRLEVPTGAGKTKAVLRYALHQMDDKSKNRFVYITAFLSVLEQNAGEIKAVIGEDGVLEHHSNVDLFHGTDKYSKGSFDEKEDIEYVQRSFIVDSWDSPVVLTTMVQFFSTLFKGKSANLRRFSSLINSVIVIDEVQSLPIEVMYFFNLTMNFLRNVMNCTVVLCTATQPIYDDKSIRHKLQYGSLSEENKNADLVLLSQEDRKCFDRYSVKKFKDRTVDSLENSHTSIEEVSQFVFENRDKSILIVVNTKAAAGSIVRSIDALNIPESDVYYLTTNLCPAHRKNIISEIKERLSLGDKIICVSTQLIEAGVDVDFELVMRSYAGLDSIVQVAGRCNREGKLPNGGEVILFNPDEGIEHTKRILGIADKKKITEEILAQRHGEIQLGSLVEEFYTSYYFNEADSSNRMEYRLKNDESSLFDLFIKGGGIVKSDIKNETGSLRGRLREVADKFQLISDDTEGVFVFYEDGIEDLNDLLRIAEQRMISSQDWLKIKQLIRKLQPYSINIYQSNKLNEFVDSYLNGSIKVLQNDHYNERFGASEEIDSLII
>NC_016630.1|WP_041250884.1|32116_32641_+|folate-family-ECF-transporter-S-component
MKKSKFSTQQLVMGGLLLALAVIVSYQNIYLYPPHSGRITLRFIPIIYGGILLGPQVGLLMGALQDPLTYFLTPGSPGTYFPGFMLTSMLMGFFPGFIIKSIRDAKMWNVTLVAFVSYIITMGLDSLWLSILMGKAYLYFLTTRAIPNLVQVAITVAVLMVLVKRVKIKDFRNE
>NC_016630.1|WP_041250723.1|30567_31431_+|bifunctional-5,10-methylene-tetrahydrofolate-dehydrogenase/5,10-methylene-tetrahydrofolate-cyclohydrolase
MVLEEKLLLGTTVAKDKTEQLREKVEELHKQGIKPKLVMMRVGDKADDLAYQRSALSRMEKVNILSEVQEFPNDVTEEVFLRQLEENNQNDEVHGILIFLPLPKHLDLKKVKECISPDKDIDAISPINIARLMNAEECFVPCTPKAVMELLSYYNIPLQGKHVVVIGRSMVIGKPVSMLLLNENATVTMTHSKTTNLQELTKRADIIVCALGKSKFLTEEYVSPHSIVIDVGINVDETGALTGDADTEQILPIVKAITPVPRGVGSVTTVMLAKQVIESAERGLQQK
>NC_016630.1|WP_041250722.1|28478_30200_+|proline--tRNA-ligase
MKMSRMYLPTLREVPSDAEVISHQLLLRAGLIRKLVSGVYSYLPLGKRVLAKIERVIREEMDAANSQEVLMSAIQPSELWKESGRWENFGPEMFRLYDRNEREFCLGPTHEEIFTSLVRDELKSYKQLPLSLYQIQTKYRDEKRPRFGVIRAREFIMKDAYTFDRDPDGMKQSYQEMWEAYTKIFDRLHMKYRVVEGDSGAMGGSDSHEFTAMAESGESTVMYAEGCDYAATDEKAECIFELPVQDTEKKELEKVSTPNVGTIEDLENFFQVSADRFAKTLLLTVKGEPIAVMIPGHRELNLIKLLKVVDAAEHEIEMAEEETVKEITGARVGFAGPIGLKKDIPLYIDKRVTEMTNIIVGANESDFHYKNANYGKDFEGTVVDDLILTQEGDICPQDRRLRLKSDRGIEVGNIFQLGTKYSDSLNLTYLDQDGKSKKVWMGSHGIGVSRTMAAIIEQNYDEKGIIWPLVVAPYHILITVVNAKKEDQMQLGEQLYQEYTKLGYEVLFDDRNERAGVKFNDADLIGIPIRINVGRRAEEGIVEFSLRRGGEKEEIPVSEIAQKVKDEFAYQGL
>NC_016630.1|WP_014261715.1|44793_45030_+|hypothetical-protein
MRKIMTKAICIKNITTFSFMTLTSFLVLGVFVVKLIEDIQKGKELFIPGVAVLFAGAIVVMVFSIIQIVKHIRMLTKL
>NC_016630.1|WP_014261716.1|45169_45907_+|DUF4241-domain-containing-protein
MELSKEWLEQYEQVKDLLVSPVNFSELFKSDEVEGKNLFLLNMGTVNFTTDEILARDPLVWLKREEEPYFTKVPMGTYPLETLVVELEEDHYRYIASRVRFHEKDSVVYRQALEGTENLEGIDSDSFFGFNVDAGLATIVDTNTRDAYCDFVDAWEKEHPEGNMYDDFFAEEFRKSYLEHPEFQRDGGDWINFKIPNTEYTVPMIQSGFGDGKYPVYFGYDESGELCDVVMEYIYVGAEETDEEE
>NC_016630.1|WP_156775271.1|46203_46608_+|hypothetical-protein
MEDHTGKFDERLEKCGITVHYETEPPRGDGIYSVILSGNQKLPFWIYDRDIILVGEDFMIVESVQYDTFEPISTVMIDIKKARYADFKEWYPDICVTKDGIELDNRFHKVKKMILKNTCDLEWIDLSTGIGTTK
>NC_016630.1|WP_014261718.1|46919_47477_+|hypothetical-protein
MNLIASIGKSAENKTVGRIGGNLPCLFLDRESEIEGYRFYMMFQNPDNHEEYFSIFVPEDYGVMIDNNTYPNCSVKVFSHRFSKESDNTNYTLKGIKKSFLTGYSEVDDNTFDFFTKSRFPQLIQEESYDTEKLEKEGYEFFVQIDEDYYTEDLINENYIFGYGALYLYRHSENGTVIAGFWQYS
>NC_016630.1|WP_014261719.1|47725_48520_+|DUF4261-domain-containing-protein
MGIFKNPFGKKNKKPEQKGQLVLSMPMFQGDSSYSADKVIQDLQSYWGLKVDEIEHSDTTISFNIDGEVIVIGLIPAPIPDEEFESMYSYSYLWEDAEQEIKEHTQHAIVSILGSSTSALKRYSILSKVNASILRTSETAIGVYQGASTLLLPKDFYIDLADLLLEDLLPVQLWVYIGIINNNDKTGLYTYGMKEFGKSEIEIIDTSMESDDAYVFLLTVLQYIIEQDVTLEHGETIGLTEDQKIKITESKAIYLDGNSLKLEL
>NC_016630.1|WP_156775211.1|48767_49238_+|hypothetical-protein
MEIRNEIERVIKEHTLDRKRCFECSKMSYHSIIKSIEQKFTRTNNIHWSNMGQGFKRNFLCQIIDVSEDSMWVQQLPKIISSHDDMVYVLFEDVIHFQPKYWIYEMGISELICIIGNVNGLNDFYIVSKKLDWLISENHEDIVSFVGDTLDISCFE
>NC_016630.1|WP_014261721.1|49382_49889_+|YfbM-family-protein
MGLIANYQYLSDENLKELKEFSGSEDDLMEQVEEWNEEADILLDIDKMWDVLHFVLTGVDSSEPIENDPLSEAVVGVSVMEGIENFIAYTDKSKVADVLSALEDFDIESAMDEFSMEDCKKADLYPNIWDYEEEEDEIKEEITDYFEAMINFYRKILETNGNVLVTIY
>NC_016630.1|WP_041250888.1|50500_50914_+|very-short-patch-repair-endonuclease
MSKKTKEQISFNMRRVKNKDSEIELLLRRELRSRNLYYRKNVKTIFGKPDIAFIGKKIAVFVDSEFWHGYNWAEKKKEIKSNQEFWISKIERNMQRDVEVNEHLQSQGWLVLRFWGNDIKKNVTTCADIVESAFRER
>NC_016630.1|WP_014261723.1|50917_52045_+|DNA-(cytosine-5-)-methyltransferase
MLFTTIDLCAGIGGIRKGFELTGHFKNLVAAEIDRYACLTYQHLYGEDADNDLTSEEFKTALEGLHYDVLLAGFPCQTFSRAGLEEGFNNEQNGVVFNHIAEIIQRTRPRAIFLENVDNLVRHDKGNTFRVIIHTLEELLNYKVIGVTYNDIGELIYNGKDFIRNSRNFGIPQNRPRTYIMAFNRQLYGADTLLGIGNLLPTEKNRYLYEDLNSLLEFRAEPKYYMSSGYFNTLVRHRERERKKGNGFGYRVVNEPGIEHPVANTIMATGGSGKERNLIYDPQEGIAGMTIPPKRTALNNRGIRVMTPREWGKLQGFINYAFLDEEGVDHFSFPSEVSVAQQYKQFGNSVTIPVIETMAEFMVDCFTVLGDIPKK
>NC_016630.1|WP_014261724.1|52315_52549_+|hypothetical-protein
MAKNETKRERFVRLAEVRTNKIIDMLKLLGNCSNTVNYEYTDADVKKIFAAIERELKNTKAKYNGSDSVNEERFTLE

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Crispr_ID: NC_016630_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016630_2

472155-473908

TypeII

Consensus_repeat	Method
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CRT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	PILER-CR
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CRISPRCasFinder

26 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NC_016630_2

>merge|NC_016630|2|472155-473908|CRT,PILER-CR,CRISPRCasFinder
CATTACAAAAATTTTTATATTCCACTACTCTCAAACAAAATTTATGACGCATATGATTATTTTTATGTTTGACTACCATATGAAATTACACTACTCTCAAACAACAGCACAGGCGGAAGCGTTGAAGAGTTAGTTTGACTACCATATGAAATTACACTACTCTCAAACCATCACTCAAATTCTTAGCTTTATGTTCAAGTTTGACTACCATATGAAATTACACTACTCTCAAACGGTTATGTTTTTAGGCATCTACTTTTGATTGGTTTGACTACCATATGAAATTACACTACTCTCAAACCCATTTTAGTAGGATTATCTTTTAAACTACAGTTTGACTACCATATGAAATTACACTACTCTCAAACGGTGGATGTCGTTGCCTAAATTACCGAAATGTTTGACTACCATATGAAATTACACTACTCTCAAACAACCGCTAAATATTTTACGATTATACATCAGTTTGACTACCATATGAAATTACACTACTCTCAAACAACCGCTAAATATTTTACGATTATACATCAGTTTGACTACCATATGAAATTACACTACTCTCAAACTTCGTCTGTTCATCACATTTTAGAAAGCTTGTTTGACTACCATATGAAATTACACTACTCTCAAACGAAAGATTAGAATATCTGACACAACATTTTGTTTGACTACCATATGAAATTACACTACTCTCAAACATTCCACAAGTCTGGCGGTGCAAAGGTGCAGTTTGACTACCATATGAAATTACACTACTCTCAAACTGCGTTCCTGCTGCAATCCCTAATACGAATGTTTGACTACCATATGAAATTACACTACTCTCAAACATGAAATAGGGGTATCGGTTCAAGAGCAAAGTTTGACTACCATATGAAATTACACTACTCTCAAACTTGCCACAGGAGATTAGACCAAACCACAGAGTTTGACTACCATATGAAATTACACTACTCTCAAACAACTACACCCGTATGATTAAAAGTAAAAGGGTTTGACTACCATATGAAATTACACTACTCTCAAACATTGGGAAAAGAATTAATAAACCAACCAAAGTTTGACTACCATATGAAATTACACTACTCTCAAACACATAATAAAAGACTTGCTTGAAATCGTGGGTTTGACTACCATATGAAATTACACTACTCTCAAACTTACAATTCCATCTTTGTTAGAATCATATTGTTTGACTACCATATGAAATTACACTACTCTCAAACAAAAGAAAGCTTGTCCGTCATAGCATTTGTGTTTGACTACCATATGAAATTACACTACTCTCAAACAAAAGAAAGCTTGTCCGTCATAGCATTTGTGTTTGACTACCATATGAAATTACACTACTCTCAAACTACTTGATGAGCCCACTCCAGCTGCATTGGGTTTGACTACCATATGAAATTACACTACTCTCAAACAATATCGATTGACTTCCGCTTCTTACCAATGTTTGACTACCATATGAAATTACACTACTCTCAAACGACAAGGAGTTGCGTTAAATATTACTGGAAGTTTGACTACCATATGAAATTACACTACTCTCAAACAAAAGAAAGCTTGTCCGTCATAGCATTTGTGTTTGACTACCATATGAAATTACACTACTCTCAAACAAAAGAAAGCTTGTCCGTCATAGCATTTGTGTTTGACTACCATATGAAATTACACTACTCTCAAACCATCATCCGCTCCGGCATAACCGCCGATTTGTTTGACTACCATATGAAATTACACTACTCTCAAAC

>NC_016630|2|2|472155-473908|CRT
CATTACAAAAATTTTTATATTCCACTACTCTCAAAC	AAAATTTATGACGCATATGATTATTTTTAT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACAGCACAGGCGGAAGCGTTGAAGAGTTA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CATCACTCAAATTCTTAGCTTTATGTTCAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GGTTATGTTTTTAGGCATCTACTTTTGATTG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CCATTTTAGTAGGATTATCTTTTAAACTACA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GGTGGATGTCGTTGCCTAAATTACCGAAAT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACCGCTAAATATTTTACGATTATACATCA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACCGCTAAATATTTTACGATTATACATCA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TTCGTCTGTTCATCACATTTTAGAAAGCTT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GAAAGATTAGAATATCTGACACAACATTTT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ATTCCACAAGTCTGGCGGTGCAAAGGTGCA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TGCGTTCCTGCTGCAATCCCTAATACGAAT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ATGAAATAGGGGTATCGGTTCAAGAGCAAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TTGCCACAGGAGATTAGACCAAACCACAGA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACTACACCCGTATGATTAAAAGTAAAAGG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ATTGGGAAAAGAATTAATAAACCAACCAAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ACATAATAAAAGACTTGCTTGAAATCGTGG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TTACAATTCCATCTTTGTTAGAATCATATT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TACTTGATGAGCCCACTCCAGCTGCATTGG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AATATCGATTGACTTCCGCTTCTTACCAAT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GACAAGGAGTTGCGTTAAATATTACTGGAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CATCATCCGCTCCGGCATAACCGCCGATTT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC

>NC_016630|2|4|472221-473908|PILER-CR
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACAGCACAGGCGGAAGCGTTGAAGAGTTA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CATCACTCAAATTCTTAGCTTTATGTTCAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GGTTATGTTTTTAGGCATCTACTTTTGATTG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CCATTTTAGTAGGATTATCTTTTAAACTACA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GGTGGATGTCGTTGCCTAAATTACCGAAAT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACCGCTAAATATTTTACGATTATACATCA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACCGCTAAATATTTTACGATTATACATCA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TTCGTCTGTTCATCACATTTTAGAAAGCTT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GAAAGATTAGAATATCTGACACAACATTTT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ATTCCACAAGTCTGGCGGTGCAAAGGTGCA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TGCGTTCCTGCTGCAATCCCTAATACGAAT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ATGAAATAGGGGTATCGGTTCAAGAGCAAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TTGCCACAGGAGATTAGACCAAACCACAGA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACTACACCCGTATGATTAAAAGTAAAAGG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ATTGGGAAAAGAATTAATAAACCAACCAAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ACATAATAAAAGACTTGCTTGAAATCGTGG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TTACAATTCCATCTTTGTTAGAATCATATT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TACTTGATGAGCCCACTCCAGCTGCATTGG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AATATCGATTGACTTCCGCTTCTTACCAAT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GACAAGGAGTTGCGTTAAATATTACTGGAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CATCATCCGCTCCGGCATAACCGCCGATTT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC

>NC_016630|2|2|472221-473908|CRISPRCasFinder
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACAGCACAGGCGGAAGCGTTGAAGAGTTA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CATCACTCAAATTCTTAGCTTTATGTTCAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GGTTATGTTTTTAGGCATCTACTTTTGATTG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CCATTTTAGTAGGATTATCTTTTAAACTACA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GGTGGATGTCGTTGCCTAAATTACCGAAAT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACCGCTAAATATTTTACGATTATACATCA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACCGCTAAATATTTTACGATTATACATCA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TTCGTCTGTTCATCACATTTTAGAAAGCTT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GAAAGATTAGAATATCTGACACAACATTTT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ATTCCACAAGTCTGGCGGTGCAAAGGTGCA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TGCGTTCCTGCTGCAATCCCTAATACGAAT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ATGAAATAGGGGTATCGGTTCAAGAGCAAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TTGCCACAGGAGATTAGACCAAACCACAGA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AACTACACCCGTATGATTAAAAGTAAAAGG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ATTGGGAAAAGAATTAATAAACCAACCAAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	ACATAATAAAAGACTTGCTTGAAATCGTGG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TTACAATTCCATCTTTGTTAGAATCATATT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	TACTTGATGAGCCCACTCCAGCTGCATTGG
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AATATCGATTGACTTCCGCTTCTTACCAAT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	GACAAGGAGTTGCGTTAAATATTACTGGAA
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	AAAAGAAAGCTTGTCCGTCATAGCATTTGT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC	CATCATCCGCTCCGGCATAACCGCCGATTT
GTTTGACTACCATATGAAATTACACTACTCTCAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_016630.1\|WP_014262096.1\|482196_482373_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380458
NC_016630.1\|WP_041250759.1\|468552_469272_-\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_041250760.1\|469792_470926_+\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_014262086.1\|467534_468029_-\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_014262100.1\|486373_487060_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NC_016630.1\|WP_014262082.1\|460903_462694_-\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825
NC_016630.1\|WP_014262092.1\|474626_474932_-\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NC_016630.1\|WP_014262093.1\|474936_475815_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NC_016630.1\|WP_014262080.1\|458250_459468_-\|AsnC-family-transcriptional-regulator	unknown	unknown	unknown
NC_016630.1\|WP_014262091.1\|473961_474630_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09644_csn2_CAS-II-A	gnl\|CDD\|213407
NC_016630.1\|WP_014262098.1\|483134_483551_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_016630.1\|WP_014262099.1\|483867_486381_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
NC_016630.1\|WP_014262081.1\|460611_460842_-\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_014262084.1\|464923_465784_-\|DUF2262-domain-containing-protein	unknown	unknown	gnl\|CDD\|378356
NC_016630.1\|WP_014262095.1\|480914_482150_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NC_016630.1\|WP_014262089.1\|471012_471873_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NC_016630.1\|WP_014262094.1\|475811_479909_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NC_016630.1\|WP_014262097.1\|482453_482651_-\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_014262085.1\|466184_467213_-\|hypothetical-protein	unknown	unknown	unknown
NC_016630.1\|WP_014262083.1\|463974_464748_-\|DUF695-domain-containing-protein	unknown	unknown	gnl\|CDD\|368292

Protein	Function_ID	Function_description	E-value
NC_016630.1\|WP_014262082.1\|460903_462694_-\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	7.41403e-07
NC_016630.1\|WP_014262098.1\|483134_483551_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.0582e-06
NC_016630.1\|WP_014262100.1\|486373_487060_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	5.08652e-103
NC_016630.1\|WP_014262092.1\|474626_474932_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	9.09191e-30
NC_016630.1\|WP_014262093.1\|474936_475815_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.75656e-109
NC_016630.1\|WP_014262091.1\|473961_474630_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213407	cd09644, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	6.91869e-59
NC_016630.1\|WP_014262099.1\|483867_486381_-\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	6.37168e-10
NC_016630.1\|WP_014262084.1\|464923_465784_-\|DUF2262-domain-containing-protein	gnl\|CDD\|378356	pfam10020, DUF2262, Uncharacterized protein conserved in bacteria (DUF2262). This domain, found in various hypothetical bacterial proteins, has no known function.	1.4631e-40
NC_016630.1\|WP_014262095.1\|480914_482150_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.42743e-34
NC_016630.1\|WP_014262096.1\|482196_482373_-\|hypothetical-protein	gnl\|CDD\|380458	cd19535, Cyc_NRPS, Cyc (heterocyclization) domain of nonribosomal peptide synthetases (NRPSs); belongs to the Condensation-domain family. Cyc (heterocyclization) domains catalyze two separate reactions in the creation of heterocyclized peptide products in nonribosomal peptide synthesis: amide bond formation followed by intramolecular cyclodehydration between a Cys, Ser, or Thr side chain and a carbonyl carbon on the peptide backbone to form a thiazoline, oxazoline, or methyloxazoline ring. Cyc-domains are homologous to standard NRPS Condensation (C) domains. C-domains typically have a conserved HHxxxD motif at the active site; Cyc-domains have an alternative, conserved DxxxxD active site motif, mutation of the aspartate residues in this motif can abolish or diminish condensation activity. NRPS can use a large variety of acyl monomers (approximately 500 different possible monomer substrates as opposed to the 20 standard amino acids in ribosomal protein synthesis) to construct bioactive secondary metabolites of 2 to 18 units long (with various activities such as antibiotic, antifungal, antitumor and immunosuppression). There are various subtypes of C-domains such as the LCL-type which catalyzes peptide bond formation between two L-amino acids, the DCL-type which links an L-amino acid to the D-amino acid at the end of a growing peptide, starter C-domains which acylate the first amino acid with a beta-hydroxy carboxylic acid, and Cyc-domains. Typically, an NRPS module consists of an adenylation domain, a peptidyl carrier protein (PCP) domain (also known as thiolation (T) domain) and a C-domain. NRPS modules may also include specialized domains such as the terminal-module thioesterase (Te) domain that releases the product via hydrolysis or macrocyclization and any of various C-domain family members such as the epimerization (E) domain, the ester-bond forming C-domain, dual E/C (epimerization and condensation) domains, and the X-domain.	0.000377129
NC_016630.1\|WP_014262089.1\|471012_471873_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	1.1712e-26
NC_016630.1\|WP_014262083.1\|463974_464748_-\|DUF695-domain-containing-protein	gnl\|CDD\|368292	pfam05117, DUF695, Family of unknown function (DUF695). Family of uncharacterized bacterial proteins.	1.4576e-37
NC_016630.1\|WP_014262094.1\|475811_479909_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	3.15733e-129

>NC_016630.1|WP_014262089.1|471012_471873_-|MBL-fold-metallo-hydrolase
MAKKDSNFQVKFMSFVFRGKEIFKPLNTGFIDEKVGCIREYVANVYFYTKDGHTIMIDAGYNYDRLAEKMRWIHINPKDIKDILITHQDTDHVGAIETDSDRLFSEATIYIGKIENEYLEGRKCRKVFWGLHKLPQVNIDNKKVLIDDGQVFYLGNIKIEAFLVPGHSWGHLVYLIDDVYLFTGDTIWFGADGGYAFLNTLAEDRKLQVKSLKRLEEILRKRNLKLKIITGHTGWTDDIDFAFAHTDEICNALRRKPKVHDSKAPYDGFDESDDTEENVKKGYLKM
>NC_016630.1|WP_041250760.1|469792_470926_+|hypothetical-protein
MEKKMFQTGRGFAIIKAILLAIIIVFFSVLGMFMVKLNFTGEHVEDAHTFGDYVYLDAVYASDLFGTDHAGNRYMFVSIKDEEKDEMHDYMFGISEKDFVETGLDKLVEATYSKEPIEIQPIHLTAYIEKSDAELDKLASEAYIHYVGDETITDPMEYLGNFCLVYSNDSALQRMGFGDWIMYLFVAIIIIMSAFEMVKIIKKQMKKENKIALCKELYERDKEYAQGLSEVDMSDTVFYKQLKCYITPNYIVTFQDGLEVFRIEDIKELYGYDEVNHSVLLGILFGWFASRRSNHYLAAVTSDNELHLFAKTSMVGKLHNQVVSHLIQKNPEILLGRKGVAVSDLEQDLTNLKLSKISGFYGDSSVWKGRVKETFIS
>NC_016630.1|WP_041250759.1|468552_469272_-|hypothetical-protein
MKKQWIFITALMTIPVIFGACNNLSKNSDASYEDDSGSKNNIAVHQVAQEDKNIQEADLHKIFQKNIVNGNRELSFLCADYDNDGTLEAFGVSADESTAADERVAKLYFINGKGNCEEIPYPKKEDFVVETWVKNDFVGDGEIVGQDDEKFFVWIENFGGPGSLAHVFGVKDGKYFRTNISGEVEDFAISEDGLYVGTTSFFKDIDSPDFAGREWMLHYFNYDNTKDEFIEIRSEPADV
>NC_016630.1|WP_014262086.1|467534_468029_-|hypothetical-protein
MDGTKIIYLSILIILGVFFIKKMVNPPIGPRYKFKMIMFTIEAEERLKTTELGSHIFTSKSRSKLILPWEFDLWTQADLFENGIVLKRNRREKTVFFYEIYAIQPLLINSLFVKGKYFGYAFTLRENKEIILKSRDMHDLDVFIEKLCFLFPPEKGVAVIGDID
>NC_016630.1|WP_014262085.1|466184_467213_-|hypothetical-protein
MGGRLIFISLISFLGISFLAIIAGMYFYMKRTVSGGKSLLDEAVNMEENTSRMTLGELLVYVSAILVALLFAVRLMDRGGSGFANLAKFIVLPPVMAFFNARKRTGRSVFVIMGAVIFSFYMFMVYIIIGVPVKAPVLTINDTEITMAHTTVSDIVADGFDIYIKQSDSPHRDYGTLLSSGIFQKYPCDRSVLVEKGFRRNSDSIYYSPYLLVKDGVVIGSIGLYGHKTEDIALEDCKIIHFKCDEDCVAAARAKAMHYRLDNMELLNPLKLETLQKTFDKKLWLFPPSNPTDVTQLHYGIKWSSGSDHLFWNEYYAYIHFDESNHMTEFEISTEVARDWNE
>NC_016630.1|WP_014262084.1|464923_465784_-|DUF2262-domain-containing-protein
MSNVLKNPFNKTVEDFEKEFCGETFELLIVTVQDVSGAAALKDGYDRPCTHFTACVDVETNEFSTVEGRLEWLVSPEEKEEQGWIYTFEPYKIHHIRCRKRPPMTLEPYMAEVLNNCYALLDYIDDSVSDNRLEALIEEYLKPVVIKDTIGEFTLNRAYSWFEGSVDFNGNRVRVMLDANQDGDVPPKSFLYLKKFTENIEERDSKIREFIVKDLWETAEDWMDSEEEDDLTEEYFYKSLFLSDFSINEEGEMTLYYGDEKEIFAGHAIEVRMNAEGEIKNATLVG
>NC_016630.1|WP_014262083.1|463974_464748_-|DUF695-domain-containing-protein
MSKKIKEIPQDWGMYLQGINEKPALTKTNLSLFRLAPIKSYDVRIQFAVYYMNQTESGLPSQEENPKLWEIEDALTEAIQCFDVIDVGLIKCEGAMNLFFYAKEKREELEQIEQSLIQTLSKEFEGYQWNIWFDTDKEWECYLETLYPNKYSMQEIKNNNVLEALQSEGDDFSKERLIEHWAYFETEEACLNFIKKVQSEHFQLFSDDVIDNGQYRYQAGVSRNDSLDDIDEITWYLLDTAEEFGGFYDGWGCGLMK
>NC_016630.1|WP_014262082.1|460903_462694_-|S-layer-homology-domain-containing-protein
MLKLKLKSFLKLIPILLITLLSTSVVFADLQNIIQNMLPFTDVKQGDWYYADVKIAYQNRLINGKTDTLFAPQDNMTAAEAVKLASCIHQLKNEGTVSLSAGVGTWYKPYVDYAKNKGLIDVDLDWNNKITRAGYMQIFARLITDEEARLNNVPDGSIPDVRMSHPSADAIYKLYRAGVVQGVDSNRNCSPMSYIKRSEVAAILTRMMDVNRRLQDFKITKEPENAKADLGTRVDLKVEVSGGKAPLSYQWEYLDEESGNFRNSTSEGNATDTLKAPVEEISYKYRCVITDATGKQVISKAAKVEKSNSGTLTVTKQPESKIGNVGQIVKLEVGVSGAKEPVTYQWEYSENLSGSFYKSEAIGNKTKELTVAIENKEYWYRCKIRDGAGQTVESGKVLVKVSGDSDNLFRITSQPIDMSASPGKLVMLGVAVTGGTQPYRYQWSYSENGRTNFFPSKAVGNKTNILKVPTERKTYYYQCEIKDDTGQALYSDIVKVTETSGAPFEIVRQPVGGYANYGEYFDLEVKVRGGREPYTYQWQYYDRNGFRNCTGPGNNEKMVKVIVDNSGIYKFPHRCVIKDADNKELITNPVVITLNE
>NC_016630.1|WP_014262081.1|460611_460842_-|hypothetical-protein
MELVVELKGGKKTIEYKWYRMKYGQNKFEFVGTGEGTNNTNKLKVNVKNVPYDYRCVMASKDNKVLSTIPVRVEKR
>NC_016630.1|WP_014262080.1|458250_459468_-|AsnC-family-transcriptional-regulator
MAEKHYTLGTEQQQEWMQDYFFPPRGIGFLEPGIVGLDSNEFSAYNVAKSFYQNYPEVFNLEYISKETGLSKEDIKKRISRMYKDKVIMLVMNPAVAVYGWGLYYWVVKLKDGTPKEVKQKLSEWFQNKDDICSGYETHGEFDYFNGNHMRVLDNLLYDVIGPWKDMPEVEYVHLCPIRRDVRESNVNMWDAHGDGYRKFVWGKEQVDKLLKYQKVIDASDFAIINAINSTKTVGDMFDYDVLEKLSGLNGKQMKKDFMEICDVRRFIVPMIYINHMKLGLTMKMYLVRLFQNVPSYRKAQIADELSDMPEFNNFWVFSDSFYDFMISSFTELTDWEELRQKIESYSEVEFVKLADSNRQFRRWVARLDDENGFWEECVFTDDFLQDRTAGNCIKCNFSKHEEVK
>NC_016630.1|WP_014262091.1|473961_474630_-|type-II-A-CRISPR-associated-protein-Csn2
MNLVYYDLNMDIELEEERLNFLVIENPVKLEDFVLSIHSAKQKITEDVSIFEKFEKINFAKQVDILFSPMSISYHTKEIQKKLLEYVLEKVQDSYLAEDFIDISGSLVSLCSKIYLELEYDIEYLDYVEVEDILKLMDIRLKEEEGRFVERLIDYSKTMFELLHKNIFILVGCSGFLTKIDFEYLRQHQFSQKILFLFVESHQIDLESPKKQTIIDIDLCEI
>NC_016630.1|WP_014262092.1|474626_474932_-|CRISPR-associated-endonuclease-Cas2
MRIIVFFDLPTITLEDKRDYRDFRKFLIKKGFLMMQESVYCKLVLNQTVASSVLSSIRKHKPKSGLVQMIMVTEKQFAKMEYLCGEKRSNVVDSDDRLVIL
>NC_016630.1|WP_014262093.1|474936_475815_-|type-II-CRISPR-associated-endonuclease-Cas1
MSWREVIITGHAKLDYKMDYLVVRKQDGTDRVYIPDIGFLMIESTRVSLTTTLISELVKNKVKIIFCDANHNPQSELLPYHGSHDTSLKVREQVSWSDEIKQLVWTEIVKEKIKNQMELLEEYQNFDRAELLKTYIEEMEPGDKNNREGHAAKVYFNTVFGIDFTRNDENTINAALNYGYNILLSCFNREIVSNGYLTQIGLWHSSRFNSFNLASDLMEPFRIIVDRKVLTLNLENFDSHNKYELVSILNGEVRIDSKVSYVNNAIKLYCKSIFEALHYEDTSYIKFYTNEL
>NC_016630.1|WP_014262094.1|475811_479909_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTKEYYLGLDVGTNSVGWAVTDSQYNLCKFKKKDMWGIRLFESANTAKDRRLQRGNRRRLERKKQRIDLLQEIFSPEICKIDPTFFIRLNESRLHLEDKSNDFKYPLFIEKDYSDIEYYKEFPTIFHLRKHLIESEEKQDIRLIYLALHNIIKTRGHFLIDGDLQSAKQLRPILDTFLLSLQEEQNLSVSLSENQKDEYEEILKNRSIAKSEKVKKLKNLFEISDELEKEEKKAQSAVIENFCKFIVGNKGDVCKFLRVSKEELEIDSFSFSEGKYEDDIVKNLEEKVPEKVYLFEQMKAMYDWNILVDILETEEYISFAKVKQYEKHKTNLRLLRDIILKYCTKDEYNRMFNDEKEAGSYTAYVGKLKKNNKKYWIEKKRNPEEFYKSLGKLLDKIEPLKEDLEVLTMMIEECKNHTLLPIQKNKDNGVIPHQVHEVELKKILENAKKYYSFLTETDKDGYSVVQKIESIFRFRIPYYVGPLSTRHQEKGSNVWMVRKPGREDRIYPWNMEEIIDFEKSNENFITRMTNKCTYLIGEDVLPKHSLLYSKYMVLNELNNVKVRGKKLPTSLKQKVFEDLFENKSKVTGKNLLEYLQIQDKDIQIDDLSGFDKDFKTSLKSYLDFKKQIFGEEIEKESIQNMIEDIIKWITIYGNDKEMLKRVIRANYSNQLTEEQMKKITGFQYSGWGNFSKMFLKGISGSDVSTGETFDIITAMWETDNNLMQILSKKFTFMDNVEDFNSGKVGKIDKITYDSTVKEMFLSPENKRAVWQTIQVAEEIKKVMGCEPKKIFIEMARGGEKVKKRTKSRKAQLLELYAACEEDCRELIKEIEDRDERDFNSMKLFLYYTQFGKCMYSGDDIDINELIRGNSKWDRDHIYPQSKIKDDSIDNLVLVNKTYNAKKSNELLSEDIQKKMHSFWLSLLNKKLITKSKYDRLTRKGDFTDEELSGFIARQLVETRQSTKAIADIFKQIYSSEVVYVKSSLVSDFRKKPLNYLKSRRVNDYHHAKDAYLNIVVGNVYNKKFTSNPIQWMKKNRDTNYSLNKVFEHDVVINGEVIWEKCTYHEDTNTYDGGTLDRIRKIVERDNILYTEYAYCEKGELFNATIQNKNGNSTVSLKKGLDVKKYGGYFSANTSYFSLIEFEDKKGDRARHIIGVPIYIANMLEHSPSAFLEYCEQKGYQNVRILVEKIKKNSLLIINGYPLRIRGENEVDTSFKRAIQLKLDQKNYELVRNIEKFLEKYVEKKGNYPIDENRDHITHEKMNQLYEVLLSKMKKFNKKGMADPSDRIEKSKPKFIKLEDLIDKINVINKMLNLLRCDNDTKADLSLIELPKNAGSFVVKKNTIGKSKIILVNQSVTGLYENRREL
>NC_016630.1|WP_014262095.1|480914_482150_-|site-specific-integrase
MSARKDNKGRALRKGEIYRESDGRYAYGYVDPYGNRKFIYSKDLKKLREREERLIKDQLDGLDVYVAGNASLNFVFDRYISTKSELRETTYTNYMYMYNHFVREGFGKKKIGEIKYSDVLYFYYDLLNNRELQVNTLETIHTVLHPTFQLAVRDDIIRNNPSDGVMAEIKKKNTKKKNMRHALTIEQQRAFMNYIASSPVFVHWNPIFTVLLGTGCRIGEVVGLRWSDIDMEKRTIDINHSMTYYPRKTDTYKCEFKVSLPKTEAGVRILPMMQPVYEALETEYERQKEEGFCTAVVDGMSGFVFSNRFGMIHNPAAINRVIRRILEAHNTEEIVKAKKEKREPIMIPHFSCHHLRHTFCSRFCENETNIKVIQEIMGHASIETTMDIYAEANSDKKKESIENLAKNLDIF
>NC_016630.1|WP_014262096.1|482196_482373_-|hypothetical-protein
MGKMGRPLVDDPKFHRVTVRMTEGEYQELKEYAKTHNLTMSQAVKSGIKKLYCNSLKK
>NC_016630.1|WP_014262097.1|482453_482651_-|hypothetical-protein
MKNKVNHKRFVRYKEGAELYSMCQTKFEEMAKEAGAVYKLNKLVLVNCDILDEYLETFRLIPYQT
>NC_016630.1|WP_014262098.1|483134_483551_-|sigma-70-family-RNA-polymerase-sigma-factor
MKKEFYLYVNGQKVKVSEEIYKVYWREREHEKYLEQVDRKNHLLFFSSLDQDGHFAENIIDESVDVEKIVETQMMIEAVRNAISRLNAEERDIIERLYFQDETLSSIARRKKVSYQAIQWRKNNILKKLKLLLEDFLR
>NC_016630.1|WP_014262099.1|483867_486381_-|ABC-transporter-permease
MRNINNRKWISNISKKSMKANRKRNLILILAISLTAFMVTAVFTVAGSMITGMEKSTMYQVGSDFHAGFKFLTQKQYDKLSRDNKISELSYSIIVGQSTNEELREDYTEIRYTGEGNAKHSFSFPEIGTLPQKENEIATCINVLDDFGLSHEIGQTIRLQIDNGIDTYEGEFLVSGIWKKPTATLANQIYVSKEFQEKFSPTWQNEVDMKKFMDVDSYAGSINPGFNFNNAFNISGKMDELKMRLDFGKEINEGVNWAYSTSSIDPTSMALMIFLLFIIMISGYLIISNIFNISITADIHHYGLLKTIGTTNIQLKKIVIRQAIMISIIAIPIGLLIGYLASMIMIPLIISNMISIPVTMKFNIWFFVVSGIFSWITVRISCIRPCRIVKKISPVEAVRYIGYSNSIKRKNKRTHKVTPVTMAWQNIGRNKKKTISVILSMALSIIMLNITVSLVASFDEDKYVSSFASSDFTVADASLFDRYLKAVENEGVSESNIEYCKKMNGIEDIGAVYMSTGFHKVDGSVLKKVLNFYETIKNKINSDEAKELETRIFDSHEIYSCVYGIDQIVYDKLEMDAGKLDWEKFKTGKYVVISAPIEGSKDDAEVAFYKIGDNINVEMPDGSTKSYEVIGIGKIPYAMGSGYSFTIDINIMLPSEEYLAHSQSKGAMKLFMNVDDDNIDKVEASLTEYCENIKPLLDFESRNKYKEGFKEMQQTFLLIGSAMSLILALIGILNFINLTYTSINERSRELMTLHAVGMTYKQIKNMLSAEGVIRIIFTFIAVFTIGIGLNRTIVNMIAGQMIMFKYQFVVWPMLVSIPIFLLIAVVIPKMFSWQNRA
>NC_016630.1|WP_014262100.1|486373_487060_-|ABC-transporter-ATP-binding-protein
MEVLKTKSLKKYYSPSEVIVKAIDGVDISVSHGEFVAIVGSSGSGKSTLLNMLGGLDRPTDGSVLVDGKDIFSFKDEELTIFRRRKIGFVFQAFNLVPVLNVYENIVLPIELDGNEVDEDYVNEIINALGLGEKVSSMPNQLSGGQQQRVAIARALATKPSIVLADEPTGNLDSKTSQDVIGLLKVTSKKIHQTVVIITHNEEIAQTADRIIRIEDGRVVSKGGGFDA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	NC_013384	Staphylococcus epidermidis plasmid SAP110B, complete sequence	5216-5245	4	0.867
NC_016630_2	2.7\|472589\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472589-472618	30	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	350476-350505	5	0.833
NC_016630_2	2.7\|472589\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472589-472618	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	285122-285151	5	0.833
NC_016630_2	2.8\|472655\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472655-472684	30	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	350476-350505	5	0.833
NC_016630_2	2.8\|472655\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472655-472684	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	285122-285151	5	0.833
NC_016630_2	2.10\|472787\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472787-472816	30	NZ_CP021876	Enterococcus wangshanyuanii strain MN05 plasmid unnamed3	67424-67453	5	0.833
NC_016630_1	1.37\|43695\|30\|NC_016630\|PILER-CR	43695-43724	30	LC494302	Escherichia phage SP27 DNA, complete genome	336642-336671	6	0.8
NC_016630_1	1.37\|43695\|30\|NC_016630\|PILER-CR	43695-43724	30	KM507819	Escherichia phage 121Q, complete genome	338022-338051	6	0.8
NC_016630_2	2.1\|472191\|30\|NC_016630\|CRT	472191-472220	30	HQ641354	Vibrio phage ICP1_2004_A, complete genome	49213-49242	6	0.8
NC_016630_2	2.1\|472191\|30\|NC_016630\|CRT	472191-472220	30	MH310933	Vibrio phage ICP1_2011_A, complete genome	49204-49233	6	0.8
NC_016630_2	2.1\|472191\|30\|NC_016630\|CRT	472191-472220	30	MN419153	Vibrio phage ICP1_2017_F_Mathbaria, complete genome	49096-49125	6	0.8
NC_016630_2	2.1\|472191\|30\|NC_016630\|CRT	472191-472220	30	KY883638	Vibrio phage JSF13, complete genome	115589-115618	6	0.8
NC_016630_2	2.1\|472191\|30\|NC_016630\|CRT	472191-472220	30	KC152959	Vibrio phage ICP1_2011_A CRISPR-Cas locus genomic sequence	4897-4926	6	0.8
NC_016630_2	2.1\|472191\|30\|NC_016630\|CRT	472191-472220	30	KY883640	Vibrio phage JSF17, complete genome	27745-27774	6	0.8
NC_016630_2	2.1\|472191\|30\|NC_016630\|CRT	472191-472220	30	KY883639	Vibrio phage JSF14, complete genome	30666-30695	6	0.8
NC_016630_2	2.14\|473051\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473051-473080	30	MN018232	Synechococcus phage S-B43, complete genome	190612-190641	6	0.8
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	NZ_KT897276	Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence	50040-50069	6	0.8
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	NZ_KT897280	Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence	48788-48817	6	0.8
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	NZ_KT897275	Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence	52965-52994	6	0.8
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	NZ_KT897277	Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence	50040-50069	6	0.8
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	NZ_KT897278	Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence	48788-48817	6	0.8
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	NZ_KT897279	Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence	48788-48817	6	0.8
NC_016630_2	2.3\|472323\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472323-472352	30	CP016969	Staphylococcus epidermidis strain DAR1907 plasmid unnamed1, complete sequence	16500-16529	7	0.767
NC_016630_2	2.12\|472919\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472919-472948	30	MN234187	Mycobacterium phage DyoEdafos, complete genome	44096-44125	7	0.767
NC_016630_2	2.12\|472919\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472919-472948	30	NC_008757	Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence	159721-159750	7	0.767
NC_016630_2	2.14\|473051\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473051-473080	30	NZ_CP033050	Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence	51390-51419	7	0.767
NC_016630_2	2.14\|473051\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473051-473080	30	MK799832	Synechococcus phage S-B05, complete genome	175615-175644	7	0.767
NC_016630_2	2.14\|473051\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473051-473080	30	MK016663	Synechococcus phage S-H68, complete genome	47707-47736	7	0.767
NC_016630_2	2.16\|473183\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473183-473212	30	NC_009931	Acaryochloris marina MBIC11017 plasmid pREB6, complete sequence	36595-36624	7	0.767
NC_016630_2	2.16\|473183\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473183-473212	30	MN694799	Marine virus AFVG_250M1004, complete genome	29876-29905	7	0.767
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	KF926093	Lactococcus phage phiL47, complete genome	110240-110269	7	0.767
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	MK448860	Streptococcus phage Javan172, complete genome	16810-16839	7	0.767
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	MK448792	Streptococcus phage Javan521, complete genome	17307-17336	7	0.767
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	MK448679	Streptococcus phage Javan137, complete genome	15321-15350	7	0.767
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	NC_004584	Streptococcus prophage 315.1, complete genome	16900-16929	7	0.767
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	MK448682	Streptococcus phage Javan143, complete genome	17163-17192	7	0.767
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	MK448770	Streptococcus phage Javan477, complete genome	17307-17336	7	0.767
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	MK448978	Streptococcus phage Javan532, complete genome	16795-16824	7	0.767
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	MK448785	Streptococcus phage Javan507, complete genome	16795-16824	7	0.767
NC_016630_1	1.24\|43007\|35\|NC_016630\|CRISPRCasFinder,CRT,PILER-CR	43007-43041	35	MH238467	Pasteurella phage Pm86, complete genome	5156-5190	8	0.771
NC_016630_2	2.2\|472257\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472257-472286	30	NZ_CP032520	Cupriavidus oxalaticus strain T2 plasmid unnamed1, complete sequence	542850-542879	8	0.733
NC_016630_2	2.2\|472257\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472257-472286	30	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	297114-297143	8	0.733
NC_016630_2	2.5\|472456\|31\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472456-472486	31	MH598800	Pelagibacter phage HTVC031P, complete genome	15141-15171	8	0.742
NC_016630_2	2.5\|472456\|31\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472456-472486	31	NZ_CP046705	Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence	301476-301506	8	0.742
NC_016630_2	2.10\|472787\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472787-472816	30	NZ_CP039853	Salinimonas sp. KX18D6 plasmid plas12, complete sequence	228550-228579	8	0.733
NC_016630_2	2.14\|473051\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473051-473080	30	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	350082-350111	8	0.733
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	483820-483849	8	0.733
NC_016630_2	2.16\|473183\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473183-473212	30	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	142488-142517	8	0.733
NC_016630_2	2.18\|473315\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473315-473344	30	NZ_CP023496	Staphylococcus simulans strain FDAARGOS_383 plasmid unnamed, complete sequence	100675-100704	8	0.733
NC_016630_1	1.3\|41588\|35\|NC_016630\|PILER-CR,CRISPRCasFinder,CRT	41588-41622	35	NC_017284	Campylobacter jejuni subsp. jejuni IA3902 plasmid pVir, complete sequence	27538-27572	9	0.743
NC_016630_1	1.3\|41588\|35\|NC_016630\|PILER-CR,CRISPRCasFinder,CRT	41588-41622	35	NC_008770	Campylobacter jejuni subsp. jejuni 81-176 plasmid pVir, complete sequence	27610-27644	9	0.743
NC_016630_1	1.3\|41588\|35\|NC_016630\|PILER-CR,CRISPRCasFinder,CRT	41588-41622	35	NZ_CP010074	Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj2, complete sequence	32977-33011	9	0.743
NC_016630_1	1.3\|41588\|35\|NC_016630\|PILER-CR,CRISPRCasFinder,CRT	41588-41622	35	NZ_CP007184	Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence	26348-26382	9	0.743
NC_016630_1	1.3\|41588\|35\|NC_016630\|PILER-CR,CRISPRCasFinder,CRT	41588-41622	35	CP013734	Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence	29098-29132	9	0.743
NC_016630_1	1.3\|41588\|35\|NC_016630\|PILER-CR,CRISPRCasFinder,CRT	41588-41622	35	CP016195	Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-1, complete sequence	125172-125206	9	0.743
NC_016630_1	1.3\|41588\|35\|NC_016630\|PILER-CR,CRISPRCasFinder,CRT	41588-41622	35	NZ_CP014746	Campylobacter jejuni strain OD267 plasmid pCJDM67 S, complete sequence	25522-25556	9	0.743
NC_016630_1	1.13\|42260\|37\|NC_016630\|CRISPRCasFinder,CRT,PILER-CR	42260-42296	37	NZ_CP023469	Salmonella enterica subsp. enterica strain BAA-1586 plasmid pSalMiami, complete sequence	16605-16641	9	0.757
NC_016630_1	1.34\|43686\|35\|NC_016630\|CRISPRCasFinder,CRT	43686-43720	35	LC494302	Escherichia phage SP27 DNA, complete genome	336641-336675	9	0.743
NC_016630_1	1.34\|43686\|35\|NC_016630\|CRISPRCasFinder,CRT	43686-43720	35	KM507819	Escherichia phage 121Q, complete genome	338021-338055	9	0.743
NC_016630_1	1.37\|43695\|30\|NC_016630\|PILER-CR	43695-43724	30	NZ_CP036489	Rahnella aquatilis strain MEM40 plasmid pMEM40-2, complete sequence	39969-39998	9	0.7
NC_016630_2	2.1\|472191\|30\|NC_016630\|CRT	472191-472220	30	NZ_KX711616	Bacillus subtilis strain 72 plasmid pBS72, complete sequence	68796-68825	9	0.7
NC_016630_2	2.5\|472456\|31\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472456-472486	31	MN693684	Marine virus AFVG_250M122, complete genome	16776-16806	9	0.71
NC_016630_2	2.7\|472589\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472589-472618	30	NZ_AP018393	Lactobacillus paracasei strain IJH-SONE68 plasmid pLPS-1, complete sequence	10597-10626	9	0.7
NC_016630_2	2.8\|472655\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472655-472684	30	NZ_AP018393	Lactobacillus paracasei strain IJH-SONE68 plasmid pLPS-1, complete sequence	10597-10626	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP025883	Escherichia coli strain 503440 plasmid p503440_100, complete sequence	41014-41043	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP025894	Escherichia coli strain 503025 plasmid p503025_100, complete sequence	9744-9773	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP025868	Escherichia coli strain 504211 plasmid p504211_100, complete sequence	52185-52214	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_KX015668	Enterobacter cloacae strain CY01 plasmid pCY-CTX, complete sequence	93118-93147	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_LT904880	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3	40561-40590	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP034755	Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p1, complete sequence	81636-81665	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_KX833209	Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence	24921-24950	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_LT904895	Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2	78666-78695	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP025870	Escherichia coli strain 503829 plasmid p503829_100, complete sequence	23904-23933	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029647	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence	84544-84573	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_005815	Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, complete sequence	78550-78579	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP009490	Yersinia pestis strain PBM19 plasmid pMT1, complete sequence	69946-69975	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_LT904853	Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2	48368-48397	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP009714	Yersinia pestis Pestoides F plasmid pMT, complete sequence	69946-69975	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP009702	Yersinia pestis strain Harbin35 plasmid unnamed1, complete sequence	84295-84324	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP009784	Yersinia pestis strain El Dorado plasmid pMT, complete sequence	91377-91406	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP009722	Yersinia pestis strain Shasta plasmid pMT, complete sequence	49294-49323	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP045259	Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pMT, complete sequence	25734-25763	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_003385	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence	23336-23365	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_014022	Yersinia pestis Z176003 plasmid pMT1, complete sequence	72221-72250	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_017266	Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pMT, complete sequence	70587-70616	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP010386	Enterobacter hormaechei subsp. xiangfangensis strain 34399 plasmid p34399-121.660kb, complete sequence	62908-62937	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP030078	Enterobacter hormaechei strain 20710 plasmid p4-20710, complete sequence	24619-24648	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP033694	Yersinia pestis strain FDAARGOS_602 plasmid unnamed1, complete sequence	42551-42580	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_009378	Yersinia pestis Pestoides F plasmid MT, complete sequence	77655-77684	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP033700	Yersinia pestis strain FDAARGOS_601 plasmid unnamed3	15282-15311	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP033700	Yersinia pestis strain FDAARGOS_601 plasmid unnamed3	111751-111780	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP046272	Enterobacter hormaechei strain E70 plasmid pE70-A, complete sequence	24576-24605	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_006323	Yersinia pestis plasmid pG8786, complete sequence	75735-75764	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP045146	Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pMT, complete sequence	25729-25758	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP045164	Yersinia pestis strain SCPM-O-B-6291 (C-25) plasmid pMT, complete sequence	25735-25764	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP045155	Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pMT, complete sequence	25734-25763	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP045159	Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pMT, complete sequence	26445-26474	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP006746	Yersinia pestis 8787 plasmid pMT1, complete sequence	123768-123797	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_003134	Yersinia pestis CO92 plasmid pMT1, complete sequence	81223-81252	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP045150	Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pMT, complete sequence	25734-25763	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP006790	Yersinia pestis 2944 plasmid pMT, complete sequence	76773-76802	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP006749	Yersinia pestis 3770 plasmid pMT1, complete sequence	106724-106753	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP032183	Citrobacter freundii strain AR_0116 plasmid unnamed5, complete sequence	98667-98696	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP006756	Yersinia pestis 1522 plasmid pMT, complete sequence	13222-13251	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_032102	Enterobacter cloacae strain G6809 plasmid pG6809-1, complete sequence	24688-24717	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	MN178640	Kluyvera cryocrescens strain SCW13 plasmid pSCW13-2, complete sequence	109004-109033	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_017155	Yersinia pestis D106004 plasmid pMT1, complete sequence	72219-72248	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_017158	Yersinia pestis D182038 plasmid pMT1, complete sequence	74014-74043	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029859	Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence	93918-93947	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	113952-113981	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029847	Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence	18680-18709	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029916	Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence	63497-63526	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_004835	Yersinia pestis strain KIM5 plasmid pMT1, complete sequence	72286-72315	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029893	Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence	90706-90735	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_004838	Yersinia pestis KIM10+ plasmid pMT-1, complete sequence	77007-77036	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029247	Enterobacter hormaechei subsp. xiangfangensis strain OSUVMCKPC4-2 plasmid pOSUEC_F, complete sequence	24627-24656	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP033692	Yersinia pestis strain FDAARGOS_603 plasmid unnamed3, complete sequence	78175-78204	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP033693	Yersinia pestis strain FDAARGOS_603 plasmid unnamed4	33266-33295	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP006760	Yersinia pestis 1413 plasmid pMT, complete sequence	123768-123797	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029876	Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence	82299-82328	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029884	Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence	65925-65954	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029961	Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence	16394-16423	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029849	Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence	70128-70157	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029857	Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence	63909-63938	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029929	Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence	27317-27346	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029865	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence	41423-41452	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP048417	Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence	24817-24846	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP021897	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_2_pilon, complete sequence	12609-12638	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP042573	Enterobacter hormaechei strain E5 plasmid pE5_002, complete sequence	23398-23427	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_LT883154	Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2	93306-93335	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP011655	Citrobacter freundii strain CAV1741 plasmid pCAV1741-110, complete sequence	52401-52430	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP006779	Yersinia pestis 1412 plasmid pMT, complete sequence	65720-65749	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP006752	Yersinia pestis 3067 plasmid pMT1, complete sequence	4845-4874	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP027605	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed1, complete sequence	26284-26313	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_AP019819	Enterobacter hormaechei subsp. hoffmannii strain OIPH-N069 plasmid pN069_2, complete sequence	36570-36599	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029905	Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence	76940-76969	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029851	Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence	90419-90448	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP019891	Enterobacter hormaechei strain FRM plasmid unnamed2, complete sequence	2435-2464	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_008118	Yersinia pestis Nepal516 plasmid pMT, complete sequence	72219-72248	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP044336	Enterobacter hormaechei strain AKB48 plasmid unnamed1, complete sequence	29908-29937	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_AP014953	Klebsiella oxytoca strain JKo3 plasmid pKO_JKo3_2, complete sequence	25347-25376	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP040567	Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence	62618-62647	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP016275	Yersinia pestis strain Cadman plasmid pMT1, complete sequence	844-873	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029889	Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence	64180-64209	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029891	Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence	79071-79100	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP019709	Yersinia pestis strain 195/P plasmid pMT1, complete sequence	90227-90256	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029898	Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence	81631-81660	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_AP018351	Enterobacter hormaechei strain TUM10695 plasmid pMTY10695_IncFIB, complete sequence	34042-34071	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP009904	Yersinia pestis Antiqua plasmid pMT, complete sequence	19176-19205	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029951	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence	93498-93527	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029867	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence	79470-79499	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029901	Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence	79113-79142	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP029921	Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence	54236-54265	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP009841	Yersinia pestis A1122 plasmid pMT, complete sequence	22580-22609	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP009989	Yersinia pestis strain Nicholisk 41 plasmid 1, complete sequence	85962-85991	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP009843	Yersinia pestis strain Dodson plasmid pMT, complete sequence	21492-21521	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP010021	Yersinia pestis str. Pestoides B plasmid pMT, complete sequence	67201-67230	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP031722	Enterobacter hormaechei strain WCHEH020038 plasmid p1_020038, complete sequence	24575-24604	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP017724	Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence	70062-70091	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NZ_CP053193	Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37c, complete sequence	25807-25836	9	0.7
NC_016630_2	2.15\|473117\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473117-473146	30	NC_018843	Salmonella phage SSU5, complete genome	42179-42208	9	0.7
NC_016630_2	2.26\|473843\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473843-473872	30	MT986025	Gordonia phage GrootJr, complete genome	10119-10148	9	0.7
NC_016630_2	2.26\|473843\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473843-473872	30	MH779501	Gordonia phage Emianna, complete genome	9696-9725	9	0.7
NC_016630_2	2.26\|473843\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473843-473872	30	MH727547	Gordonia phage Foxboro, complete genome	10056-10085	9	0.7
NC_016630_2	2.26\|473843\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473843-473872	30	MH779510	Gordonia phage Kurt, complete genome	9696-9725	9	0.7
NC_016630_2	2.26\|473843\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473843-473872	30	MH727552	Gordonia phage KidneyBean, complete genome	9459-9488	9	0.7
NC_016630_2	2.26\|473843\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473843-473872	30	MT889393	Gordonia phage NovumRegina, complete genome	10118-10147	9	0.7
NC_016630_2	2.26\|473843\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473843-473872	30	MH536824	Gordonia phage NatB6, complete genome	9787-9816	9	0.7
NC_016630_2	2.26\|473843\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	473843-473872	30	MH779508	Gordonia phage Jifall16, complete genome	9180-9209	9	0.7
NC_016630_1	1.2\|41521\|35\|NC_016630\|PILER-CR,CRISPRCasFinder,CRT	41521-41555	35	MF417895	Uncultured Caudovirales phage clone 10AX_1, partial genome	33957-33991	10	0.714
NC_016630_1	1.2\|41521\|35\|NC_016630\|PILER-CR,CRISPRCasFinder,CRT	41521-41555	35	MF417909	Uncultured Caudovirales phage clone 10F_7, partial genome	24980-25014	10	0.714
NC_016630_1	1.22\|42866\|34\|NC_016630\|CRISPRCasFinder,CRT,PILER-CR	42866-42899	34	MN657151	Polaromonas sp. strain ANT_J31B plasmid pA31BJ1, complete sequence	2042-2075	10	0.706
NC_016630_2	2.2\|472257\|30\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472257-472286	30	MT446392	UNVERIFIED: Escherichia virus TH15, complete genome	90599-90628	10	0.667
NC_016630_2	2.5\|472456\|31\|NC_016630\|CRT,PILER-CR,CRISPRCasFinder	472456-472486	31	NZ_CP006906	Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence	156123-156153	10	0.677

1. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_013384 (Staphylococcus epidermidis plasmid SAP110B, complete sequence) position: , mismatch: 4, identity: 0.867

--ttacaattccatctttgttagaatcatatt	CRISPR spacer
cattaaaat--catcttttttagaatcatatt	Protospacer
  *** ***  ******* *************

2. spacer 2.7|472589|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

aaccgctaaatattttacgattatacatca	CRISPR spacer
aattgttaaatattttacgcttatacatta	Protospacer
**..*.************* ********.*

3. spacer 2.7|472589|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 5, identity: 0.833

aaccgctaaatattttacgattatacatca	CRISPR spacer
aattgttaaatattttacgcttatacatta	Protospacer
**..*.************* ********.*

4. spacer 2.8|472655|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

aaccgctaaatattttacgattatacatca	CRISPR spacer
aattgttaaatattttacgcttatacatta	Protospacer
**..*.************* ********.*

5. spacer 2.8|472655|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 5, identity: 0.833

aaccgctaaatattttacgattatacatca	CRISPR spacer
aattgttaaatattttacgcttatacatta	Protospacer
**..*.************* ********.*

6. spacer 2.10|472787|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021876 (Enterococcus wangshanyuanii strain MN05 plasmid unnamed3) position: , mismatch: 5, identity: 0.833

gaaagattagaatatctgacacaacatttt	CRISPR spacer
gaaagataagaatatctgatacaacttctg	Protospacer
******* ***********.***** *.*

7. spacer 1.37|43695|30|NC_016630|PILER-CR matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 6, identity: 0.8

cttacaatttccagttcagattttggaatt	CRISPR spacer
tttacaatttccagtacagattttagatac	Protospacer
.************** ********.**  .

8. spacer 1.37|43695|30|NC_016630|PILER-CR matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 6, identity: 0.8

cttacaatttccagttcagattttggaatt	CRISPR spacer
tttacaatttccagtacagattttagatac	Protospacer
.************** ********.**  .

9. spacer 2.1|472191|30|NC_016630|CRT matches to HQ641354 (Vibrio phage ICP1_2004_A, complete genome) position: , mismatch: 6, identity: 0.8

aaaatttatgacgcatatgattatttttat	CRISPR spacer
taaatttatcacgcatatgtttattgtcaa	Protospacer
 ******** ********* ***** *.*

10. spacer 2.1|472191|30|NC_016630|CRT matches to MH310933 (Vibrio phage ICP1_2011_A, complete genome) position: , mismatch: 6, identity: 0.8

aaaatttatgacgcatatgattatttttat	CRISPR spacer
taaatttatcacgcatatgtttattgtcaa	Protospacer
 ******** ********* ***** *.*

11. spacer 2.1|472191|30|NC_016630|CRT matches to MN419153 (Vibrio phage ICP1_2017_F_Mathbaria, complete genome) position: , mismatch: 6, identity: 0.8

aaaatttatgacgcatatgattatttttat	CRISPR spacer
taaatttatcacgcatatgtttattgtcaa	Protospacer
 ******** ********* ***** *.*

12. spacer 2.1|472191|30|NC_016630|CRT matches to KY883638 (Vibrio phage JSF13, complete genome) position: , mismatch: 6, identity: 0.8

aaaatttatgacgcatatgattatttttat	CRISPR spacer
taaatttatcacgcatatgtttattgtcaa	Protospacer
 ******** ********* ***** *.*

13. spacer 2.1|472191|30|NC_016630|CRT matches to KC152959 (Vibrio phage ICP1_2011_A CRISPR-Cas locus genomic sequence) position: , mismatch: 6, identity: 0.8

aaaatttatgacgcatatgattatttttat	CRISPR spacer
taaatttatcacgcatatgtttattgtcaa	Protospacer
 ******** ********* ***** *.*

14. spacer 2.1|472191|30|NC_016630|CRT matches to KY883640 (Vibrio phage JSF17, complete genome) position: , mismatch: 6, identity: 0.8

aaaatttatgacgcatatgattatttttat	CRISPR spacer
taaatttatcacgcatatgtttattgtcaa	Protospacer
 ******** ********* ***** *.*

15. spacer 2.1|472191|30|NC_016630|CRT matches to KY883639 (Vibrio phage JSF14, complete genome) position: , mismatch: 6, identity: 0.8

aaaatttatgacgcatatgattatttttat	CRISPR spacer
taaatttatcacgcatatgtttattgtcaa	Protospacer
 ******** ********* ***** *.*

16. spacer 2.14|473051|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MN018232 (Synechococcus phage S-B43, complete genome) position: , mismatch: 6, identity: 0.8

----ttgccacaggagattagaccaaaccacaga	CRISPR spacer
tacattg----aggagattccaccaaaccacaga	Protospacer
    ***    ********  *************

17. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT897276 (Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence) position: , mismatch: 6, identity: 0.8

ttacaat-tccatctttgttagaatcatatt	CRISPR spacer
-accaatgtccatctttattagaatcataaa	Protospacer
   **** *********.***********

18. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT897280 (Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence) position: , mismatch: 6, identity: 0.8

ttacaat-tccatctttgttagaatcatatt	CRISPR spacer
-accaatgtccatctttattagaatcataaa	Protospacer
   **** *********.***********

19. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 6, identity: 0.8

ttacaat-tccatctttgttagaatcatatt	CRISPR spacer
-accaatgtccatctttattagaatcataaa	Protospacer
   **** *********.***********

20. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT897277 (Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence) position: , mismatch: 6, identity: 0.8

ttacaat-tccatctttgttagaatcatatt	CRISPR spacer
-accaatgtccatctttattagaatcataaa	Protospacer
   **** *********.***********

21. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT897278 (Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence) position: , mismatch: 6, identity: 0.8

ttacaat-tccatctttgttagaatcatatt	CRISPR spacer
-agcaatgtccatctttattagaatcataaa	Protospacer
  .**** *********.***********

22. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT897279 (Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence) position: , mismatch: 6, identity: 0.8

ttacaat-tccatctttgttagaatcatatt	CRISPR spacer
-agcaatgtccatctttattagaatcataaa	Protospacer
  .**** *********.***********

23. spacer 2.3|472323|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to CP016969 (Staphylococcus epidermidis strain DAR1907 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

catcactcaaattcttagctttatgttcaa	CRISPR spacer
cagacaacaaagtattagctttatgttcaa	Protospacer
**     **** * ****************

24. spacer 2.12|472919|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MN234187 (Mycobacterium phage DyoEdafos, complete genome) position: , mismatch: 7, identity: 0.767

tgcgttcctgctgcaatccctaatacgaat	CRISPR spacer
tacgttcctgctgcaatccctgatgctgcc	Protospacer
*.*******************.**.* . .

25. spacer 2.12|472919|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_008757 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence) position: , mismatch: 7, identity: 0.767

tgcgttcctgctgcaatccctaatacgaat	CRISPR spacer
tcggtcgatgctgcaatccctaattcgaag	Protospacer
*  **.  **************** ****

26. spacer 2.14|473051|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033050 (Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ttgccacaggagattagaccaaaccacaga	CRISPR spacer
tctccacaggagattagaccactccacccg	Protospacer
*. ******************  ****  .

27. spacer 2.14|473051|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MK799832 (Synechococcus phage S-B05, complete genome) position: , mismatch: 7, identity: 0.767

ttgccacaggagattagaccaaaccacaga	CRISPR spacer
tacactgaggagattccaccaaaccacaga	Protospacer
*   *  ********  *************

28. spacer 2.14|473051|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MK016663 (Synechococcus phage S-H68, complete genome) position: , mismatch: 7, identity: 0.767

ttgccacaggagattagaccaaaccacaga	CRISPR spacer
tacactgaggagattccaccaaaccacaga	Protospacer
*   *  ********  *************

29. spacer 2.16|473183|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_009931 (Acaryochloris marina MBIC11017 plasmid pREB6, complete sequence) position: , mismatch: 7, identity: 0.767

attggga--aaagaattaataaaccaaccaaa	CRISPR spacer
--taaaaccaaagaattgattaaccaaccaaa	Protospacer
  *...*  ********.** ***********

30. spacer 2.16|473183|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MN694799 (Marine virus AFVG_250M1004, complete genome) position: , mismatch: 7, identity: 0.767

attgggaaaagaattaataaaccaaccaaa	CRISPR spacer
aatgggaaaagaattaataagcaaagcttt	Protospacer
* ******************.* ** *

31. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to KF926093 (Lactococcus phage phiL47, complete genome) position: , mismatch: 7, identity: 0.767

ttacaattccatctttgttagaatcatatt	CRISPR spacer
gcttagttccacctttgttaaaatcatatt	Protospacer
 . .*.*****.********.*********

32. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 7, identity: 0.767

ttacaattccatctttgttagaatcatatt	CRISPR spacer
ggacacggacatctttgttagactcatatt	Protospacer
  ***    ************* *******

33. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 7, identity: 0.767

ttacaattccatctttgttagaatcatatt	CRISPR spacer
ggacacggacatctttgttagactcatatt	Protospacer
  ***    ************* *******

34. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 7, identity: 0.767

ttacaattccatctttgttagaatcatatt	CRISPR spacer
ggacacggacatctttgttagactcatatt	Protospacer
  ***    ************* *******

35. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 7, identity: 0.767

ttacaattccatctttgttagaatcatatt	CRISPR spacer
ggacacggacatctttgttagactcatatt	Protospacer
  ***    ************* *******

36. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 7, identity: 0.767

ttacaattccatctttgttagaatcatatt	CRISPR spacer
ggacacggacatctttgttagactcatatt	Protospacer
  ***    ************* *******

37. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 7, identity: 0.767

ttacaattccatctttgttagaatcatatt	CRISPR spacer
ggacacggacatctttgttagactcatatt	Protospacer
  ***    ************* *******

38. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 7, identity: 0.767

ttacaattccatctttgttagaatcatatt	CRISPR spacer
ggacacggacatctttgttagactcatatt	Protospacer
  ***    ************* *******

39. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 7, identity: 0.767

ttacaattccatctttgttagaatcatatt	CRISPR spacer
ggacacggacatctttgttagactcatatt	Protospacer
  ***    ************* *******

40. spacer 1.24|43007|35|NC_016630|CRISPRCasFinder,CRT,PILER-CR matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 8, identity: 0.771

aaatcctctccgtttcccagcaactgaaaaagctt	CRISPR spacer
taaactttgacgattgccagcaactgaaaaagctt	Protospacer
 ** *.*.  ** ** *******************

41. spacer 2.2|472257|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032520 (Cupriavidus oxalaticus strain T2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aacagcacaggcggaagcgttgaagagtta	CRISPR spacer
aacagcgcaggcggaagcgttcccgacgcg	Protospacer
******.**************   **  ..

42. spacer 2.2|472257|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aacagcacaggcggaagcgttgaagagtta	CRISPR spacer
aacagcgcaggcggaagcgttcccgacgcg	Protospacer
******.**************   **  ..

43. spacer 2.5|472456|31|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MH598800 (Pelagibacter phage HTVC031P, complete genome) position: , mismatch: 8, identity: 0.742

ccattttagtaggattatcttttaaactaca	CRISPR spacer
atattttattaggattatctgttaaaacagg	Protospacer
 .****** *********** ***** .* .

44. spacer 2.5|472456|31|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046705 (Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence) position: , mismatch: 8, identity: 0.742

ccattttagtaggattatcttttaaactaca	CRISPR spacer
gcattttagtaggcgtatcttttattcacga	Protospacer
 ************  *********  *   *

45. spacer 2.10|472787|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039853 (Salinimonas sp. KX18D6 plasmid plas12, complete sequence) position: , mismatch: 8, identity: 0.733

gaaagattagaatatctgacacaacatttt	CRISPR spacer
acattcttagaatatctgacagaacatgat	Protospacer
. *   *************** *****  *

46. spacer 2.14|473051|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 8, identity: 0.733

ttgccacaggagattagaccaaaccacaga	CRISPR spacer
ttaccacaggagattagaccagaaagaatt	Protospacer
**.******************.*  . *

47. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
aactacacccgcatggttaaaagttttgcc	Protospacer
***********.***.********   .

48. spacer 2.16|473183|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 8, identity: 0.733

attgggaaaagaattaataaaccaaccaaa	CRISPR spacer
taacaaaaaagatttaataaaacaaccaaa	Protospacer
    ..****** ******** ********

49. spacer 2.18|473315|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023496 (Staphylococcus simulans strain FDAARGOS_383 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ttacaattccatctttgttagaatcatatt	CRISPR spacer
caccgattccatcattgttagaatcattaa	Protospacer
.  *.******** *************

50. spacer 1.3|41588|35|NC_016630|PILER-CR,CRISPRCasFinder,CRT matches to NC_017284 (Campylobacter jejuni subsp. jejuni IA3902 plasmid pVir, complete sequence) position: , mismatch: 9, identity: 0.743

ttttttacattttttacattttacatatacttttt	CRISPR spacer
tttcttacattttttacattttgcaagcaagatta	Protospacer
***.******************.** ..*   **

51. spacer 1.3|41588|35|NC_016630|PILER-CR,CRISPRCasFinder,CRT matches to NC_008770 (Campylobacter jejuni subsp. jejuni 81-176 plasmid pVir, complete sequence) position: , mismatch: 9, identity: 0.743

ttttttacattttttacattttacatatacttttt	CRISPR spacer
tttcttacattttttacattttgcaagcaagatta	Protospacer
***.******************.** ..*   **

52. spacer 1.3|41588|35|NC_016630|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010074 (Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj2, complete sequence) position: , mismatch: 9, identity: 0.743

ttttttacattttttacattttacatatacttttt	CRISPR spacer
tttcttacattttttacattttgcaagcaagatta	Protospacer
***.******************.** ..*   **

53. spacer 1.3|41588|35|NC_016630|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007184 (Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence) position: , mismatch: 9, identity: 0.743

ttttttacattttttacattttacatatacttttt	CRISPR spacer
tttcttacattttttacattttgcaagcaagatta	Protospacer
***.******************.** ..*   **

54. spacer 1.3|41588|35|NC_016630|PILER-CR,CRISPRCasFinder,CRT matches to CP013734 (Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence) position: , mismatch: 9, identity: 0.743

ttttttacattttttacattttacatatacttttt	CRISPR spacer
tttcttacattttttacattttgcaagcaagatta	Protospacer
***.******************.** ..*   **

55. spacer 1.3|41588|35|NC_016630|PILER-CR,CRISPRCasFinder,CRT matches to CP016195 (Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-1, complete sequence) position: , mismatch: 9, identity: 0.743

ttttttacattttttacattttaca---tatacttttt	CRISPR spacer
ttttttacattttttaaattttgcaatgtaagccg---	Protospacer
**************** *****.**   ** .*.

56. spacer 1.3|41588|35|NC_016630|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014746 (Campylobacter jejuni strain OD267 plasmid pCJDM67 S, complete sequence) position: , mismatch: 9, identity: 0.743

ttttttacattttttacattttacatatacttttt	CRISPR spacer
tttcttacattttttacattttgcaagcaagatta	Protospacer
***.******************.** ..*   **

57. spacer 1.13|42260|37|NC_016630|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023469 (Salmonella enterica subsp. enterica strain BAA-1586 plasmid pSalMiami, complete sequence) position: , mismatch: 9, identity: 0.757

gttcataaatcacctcttaata-taaaatatgagcaac	CRISPR spacer
attgataaatcacctcttaatattaaaacacgtttta-	Protospacer
.** ****************** *****.*.*  . *

58. spacer 1.34|43686|35|NC_016630|CRISPRCasFinder,CRT matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 9, identity: 0.743

ttctcttacaatttccagttcagattttggaattt	CRISPR spacer
gttatttacaatttccagtacagattttagatact	Protospacer
 *. .************** ********.**  .*

59. spacer 1.34|43686|35|NC_016630|CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 9, identity: 0.743

ttctcttacaatttccagttcagattttggaattt	CRISPR spacer
gttatttacaatttccagtacagattttagatact	Protospacer
 *. .************** ********.**  .*

60. spacer 1.37|43695|30|NC_016630|PILER-CR matches to NZ_CP036489 (Rahnella aquatilis strain MEM40 plasmid pMEM40-2, complete sequence) position: , mismatch: 9, identity: 0.7

cttacaatttccagttcagattttggaatt	CRISPR spacer
tatacaatttccggttcagatttgtcacca	Protospacer
. **********.**********   * .

61. spacer 2.1|472191|30|NC_016630|CRT matches to NZ_KX711616 (Bacillus subtilis strain 72 plasmid pBS72, complete sequence) position: , mismatch: 9, identity: 0.7

aaaatttatgacgcatatgattatttttat	CRISPR spacer
tattcccatgacgcataggattatttttca	Protospacer
 *  ...********** **********

62. spacer 2.5|472456|31|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MN693684 (Marine virus AFVG_250M122, complete genome) position: , mismatch: 9, identity: 0.71

ccattttagtaggattatcttttaaactaca	CRISPR spacer
tatatttagtaggattatctataaaactttg	Protospacer
.   **************** * ***** ..

63. spacer 2.7|472589|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP018393 (Lactobacillus paracasei strain IJH-SONE68 plasmid pLPS-1, complete sequence) position: , mismatch: 9, identity: 0.7

aaccgctaaatattttacgattatacatca	CRISPR spacer
tatttctaaatattttgcgattataccagc	Protospacer
 *.. ***********.*********

64. spacer 2.8|472655|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP018393 (Lactobacillus paracasei strain IJH-SONE68 plasmid pLPS-1, complete sequence) position: , mismatch: 9, identity: 0.7

aaccgctaaatattttacgattatacatca	CRISPR spacer
tatttctaaatattttgcgattataccagc	Protospacer
 *.. ***********.*********

65. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

66. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

67. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

68. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KX015668 (Enterobacter cloacae strain CY01 plasmid pCY-CTX, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

69. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

70. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034755 (Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

71. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KX833209 (Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

72. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

73. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

74. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

75. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_005815 (Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

76. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009490 (Yersinia pestis strain PBM19 plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

77. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

78. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009714 (Yersinia pestis Pestoides F plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

79. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009702 (Yersinia pestis strain Harbin35 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

80. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009784 (Yersinia pestis strain El Dorado plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

81. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009722 (Yersinia pestis strain Shasta plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

82. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045259 (Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

83. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

84. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_014022 (Yersinia pestis Z176003 plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

85. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_017266 (Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

86. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010386 (Enterobacter hormaechei subsp. xiangfangensis strain 34399 plasmid p34399-121.660kb, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

87. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030078 (Enterobacter hormaechei strain 20710 plasmid p4-20710, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

88. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033694 (Yersinia pestis strain FDAARGOS_602 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

89. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_009378 (Yersinia pestis Pestoides F plasmid MT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

90. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033700 (Yersinia pestis strain FDAARGOS_601 plasmid unnamed3) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

91. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033700 (Yersinia pestis strain FDAARGOS_601 plasmid unnamed3) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

92. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046272 (Enterobacter hormaechei strain E70 plasmid pE70-A, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

93. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_006323 (Yersinia pestis plasmid pG8786, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

94. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045146 (Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

95. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045164 (Yersinia pestis strain SCPM-O-B-6291 (C-25) plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

96. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045155 (Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

97. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045159 (Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

98. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP006746 (Yersinia pestis 8787 plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

99. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_003134 (Yersinia pestis CO92 plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

100. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045150 (Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

101. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP006790 (Yersinia pestis 2944 plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

102. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP006749 (Yersinia pestis 3770 plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

103. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032183 (Citrobacter freundii strain AR_0116 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

104. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP006756 (Yersinia pestis 1522 plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

105. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_032102 (Enterobacter cloacae strain G6809 plasmid pG6809-1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

106. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MN178640 (Kluyvera cryocrescens strain SCW13 plasmid pSCW13-2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

107. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_017155 (Yersinia pestis D106004 plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

108. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_017158 (Yersinia pestis D182038 plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

109. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

110. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

111. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

112. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

113. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_004835 (Yersinia pestis strain KIM5 plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

114. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

115. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_004838 (Yersinia pestis KIM10+ plasmid pMT-1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

116. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029247 (Enterobacter hormaechei subsp. xiangfangensis strain OSUVMCKPC4-2 plasmid pOSUEC_F, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

117. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033692 (Yersinia pestis strain FDAARGOS_603 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

118. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033693 (Yersinia pestis strain FDAARGOS_603 plasmid unnamed4) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

119. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP006760 (Yersinia pestis 1413 plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

120. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

121. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

122. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

123. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

124. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

125. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

126. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

127. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP048417 (Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

128. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021897 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

129. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP042573 (Enterobacter hormaechei strain E5 plasmid pE5_002, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

130. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

131. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011655 (Citrobacter freundii strain CAV1741 plasmid pCAV1741-110, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

132. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP006779 (Yersinia pestis 1412 plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

133. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP006752 (Yersinia pestis 3067 plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

134. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027605 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

135. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP019819 (Enterobacter hormaechei subsp. hoffmannii strain OIPH-N069 plasmid pN069_2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

136. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

137. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

138. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019891 (Enterobacter hormaechei strain FRM plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

139. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_008118 (Yersinia pestis Nepal516 plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

140. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP044336 (Enterobacter hormaechei strain AKB48 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

141. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP014953 (Klebsiella oxytoca strain JKo3 plasmid pKO_JKo3_2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

142. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP040567 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

143. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016275 (Yersinia pestis strain Cadman plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

144. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

145. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

146. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019709 (Yersinia pestis strain 195/P plasmid pMT1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

147. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

148. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP018351 (Enterobacter hormaechei strain TUM10695 plasmid pMTY10695_IncFIB, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

149. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009904 (Yersinia pestis Antiqua plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

150. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

151. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

152. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

153. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

154. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009841 (Yersinia pestis A1122 plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

155. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009989 (Yersinia pestis strain Nicholisk 41 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

156. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009843 (Yersinia pestis strain Dodson plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

157. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010021 (Yersinia pestis str. Pestoides B plasmid pMT, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaac	Protospacer
..   ****.************* ****.

158. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP031722 (Enterobacter hormaechei strain WCHEH020038 plasmid p1_020038, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

159. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017724 (Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

160. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP053193 (Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37c, complete sequence) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

161. spacer 2.15|473117|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NC_018843 (Salmonella phage SSU5, complete genome) position: , mismatch: 9, identity: 0.7

aactacacccgtatgattaaaagtaaaagg	CRISPR spacer
ggaatcacctgtatgattaaaagaaaaaca	Protospacer
..   ****.************* **** .

162. spacer 2.26|473843|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MT986025 (Gordonia phage GrootJr, complete genome) position: , mismatch: 9, identity: 0.7

catcatccgctccggcataaccgccgattt	CRISPR spacer
tcggatccgctccggcatgaccgccagatc	Protospacer
.   **************.******.. *.

163. spacer 2.26|473843|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MH779501 (Gordonia phage Emianna, complete genome) position: , mismatch: 9, identity: 0.7

catcatccgctccggcataaccgccgattt	CRISPR spacer
tcggatccgctccggcatgaccgccagatc	Protospacer
.   **************.******.. *.

164. spacer 2.26|473843|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MH727547 (Gordonia phage Foxboro, complete genome) position: , mismatch: 9, identity: 0.7

catcatccgctccggcataaccgccgattt	CRISPR spacer
tcggatccgctccggcatgaccgccagatc	Protospacer
.   **************.******.. *.

165. spacer 2.26|473843|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MH779510 (Gordonia phage Kurt, complete genome) position: , mismatch: 9, identity: 0.7

catcatccgctccggcataaccgccgattt	CRISPR spacer
tcggatccgctccggcatgaccgccagatc	Protospacer
.   **************.******.. *.

166. spacer 2.26|473843|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MH727552 (Gordonia phage KidneyBean, complete genome) position: , mismatch: 9, identity: 0.7

catcatccgctccggcataaccgccgattt	CRISPR spacer
tcggatccgctccggcatgaccgccagatc	Protospacer
.   **************.******.. *.

167. spacer 2.26|473843|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MT889393 (Gordonia phage NovumRegina, complete genome) position: , mismatch: 9, identity: 0.7

catcatccgctccggcataaccgccgattt	CRISPR spacer
tcggatccgctccggcatgaccgccagatc	Protospacer
.   **************.******.. *.

168. spacer 2.26|473843|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MH536824 (Gordonia phage NatB6, complete genome) position: , mismatch: 9, identity: 0.7

catcatccgctccggcataaccgccgattt	CRISPR spacer
tcggatccgctccggcatgaccgccagatc	Protospacer
.   **************.******.. *.

169. spacer 2.26|473843|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MH779508 (Gordonia phage Jifall16, complete genome) position: , mismatch: 9, identity: 0.7

catcatccgctccggcataaccgccgattt	CRISPR spacer
tcggatccgctccggcatgaccgccagatc	Protospacer
.   **************.******.. *.

170. spacer 1.2|41521|35|NC_016630|PILER-CR,CRISPRCasFinder,CRT matches to MF417895 (Uncultured Caudovirales phage clone 10AX_1, partial genome) position: , mismatch: 10, identity: 0.714

gtttgaatctgctatgaaaagcctaactgattgca	CRISPR spacer
cggtaaatctgctatgaaacgcataactgactttg	Protospacer
   *.************** ** *******.* ..

171. spacer 1.2|41521|35|NC_016630|PILER-CR,CRISPRCasFinder,CRT matches to MF417909 (Uncultured Caudovirales phage clone 10F_7, partial genome) position: , mismatch: 10, identity: 0.714

gtttgaatctgctatgaaaagcctaactgattgca	CRISPR spacer
cggtaaatctgctatgaaacgcataactgactttg	Protospacer
   *.************** ** *******.* ..

172. spacer 1.22|42866|34|NC_016630|CRISPRCasFinder,CRT,PILER-CR matches to MN657151 (Polaromonas sp. strain ANT_J31B plasmid pA31BJ1, complete sequence) position: , mismatch: 10, identity: 0.706

cggagtactgtcctgctttacctgcttggcctaa	CRISPR spacer
ccttgccttgacctgcttcacctgcttggcctcc	Protospacer
*   *. .** *******.*************

173. spacer 2.2|472257|30|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to MT446392 (UNVERIFIED: Escherichia virus TH15, complete genome) position: , mismatch: 10, identity: 0.667

aacagcacaggcggaagcgttgaagagtta	CRISPR spacer
ggtggcacaggcggtagcgttgaagttcat	Protospacer
....********** **********  .

174. spacer 2.5|472456|31|NC_016630|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP006906 (Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence) position: , mismatch: 10, identity: 0.677

ccattttagtaggattatcttttaaactaca	CRISPR spacer
atgtttttttaggattatcttttaaaaattt	Protospacer
 ..****  *****************   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

151284 : 164388

Bacillus_phage(12.5%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041250732.1\|151284_152022_-	NAD-dependent protein deacylase	S5M4R0	Bacillus_phage	1.4e-28	32.2
WP_014261811.1\|152258_152696_+	hypothetical protein	NA	NA	NA	NA
WP_049770186.1\|152919_154002_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	4.0e-45	33.6
WP_014261813.1\|154244_154730_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.8e-22	40.3
WP_014261814.1\|154794_156147_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	2.0e-46	30.2
WP_014261815.1\|156209_157256_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7STB2	Cyanophage	7.0e-63	42.8
WP_041250733.1\|157231_157831_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.0e-21	36.1
WP_156775217.1\|157796_159323_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	6.0e-63	41.8
WP_014261818.1\|159432_164388_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.2e-27	26.0

DBSCAN-SWA_2

1243538 : 1269114

Streptococcus_phage(90.0%)

integrase

attL 1242537:1242551|attR 1262471:1262485

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1242537:1242551	attL	NA	NA	NA	NA
WP_000042123.1\|1243538_1245209_-	recombinase family protein	A0A1X9I6J1	Streptococcus_phage	3.8e-26	26.7
WP_001860240.1\|1245351_1245582_-	hypothetical protein	NA	NA	NA	NA
WP_001123821.1\|1246046_1246457_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_001291569.1\|1247250_1248468_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	7.3e-213	90.1
WP_000814510.1\|1248549_1248753_-	excisionase	A0A1S5SF07	Streptococcus_phage	9.8e-30	95.5
WP_001224508.1\|1249214_1249445_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.6e-31	88.2
WP_000804877.1\|1249441_1249867_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	7.7e-61	85.0
WP_014262665.1\|1250377_1250731_+	helix-turn-helix domain-containing protein	A0A1S5SFA6	Streptococcus_phage	2.7e-51	87.2
WP_076640876.1\|1250787_1250955_-	cysteine-rich KTR domain-containing protein	D0R0F6	Streptococcus_phage	2.5e-15	68.0
WP_014262666.1\|1251072_1252992_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A2K5B2A5	Erysipelothrix_phage	0.0e+00	92.8
WP_076640873.1\|1253007_1253115_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_041250823.1\|1253368_1254301_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	3.1e-147	84.8
WP_014262668.1\|1254297_1255299_-	bifunctional lysozyme/C40 family peptidase	A0A1S5SEZ8	Streptococcus_phage	6.7e-180	93.7
WP_007556404.1\|1255295_1257473_-	membrane protein	A0A1S5SF30	Streptococcus_phage	2.3e-302	83.8
WP_002368314.1\|1257475_1259923_-	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	97.8
WP_025186755.1\|1259906_1260299_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	1.2e-68	99.2
WP_002368312.1\|1260312_1260810_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	9.6e-87	94.5
WP_001009056.1\|1260926_1261148_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_002390710.1\|1261190_1262366_-	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	1.9e-218	96.2
WP_002390709.1\|1262413_1262569_-	hypothetical protein	NA	NA	NA	NA
1262471:1262485	attR	NA	NA	NA	NA
WP_002368310.1\|1262571_1263966_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	6.8e-247	90.9
WP_000985040.1\|1264005_1264392_-	YdcP family protein	A0A1S5SF96	Streptococcus_phage	2.5e-58	89.0
WP_000420681.1\|1264407_1264722_-	YdcP family protein	A0A1S5SF38	Streptococcus_phage	3.7e-52	97.1
WP_000431741.1\|1266045_1266774_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_014262669.1\|1266773_1267364_-	MptD family putative ECF transporter S component	NA	NA	NA	NA
WP_000620708.1\|1267389_1269114_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.0e-35	28.1

DBSCAN-SWA_3

1500279 : 1509377

Staphylococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014262867.1\|1500279_1500846_-	GrpB family protein	A0A2K5B2B6	Erysipelothrix_phage	1.6e-13	33.5
WP_014262868.1\|1501048_1501510_-	flavodoxin	NA	NA	NA	NA
WP_014262869.1\|1501917_1502277_-	NINE protein	M4ZS56	Bacillus_phage	3.9e-13	55.9
WP_014262871.1\|1503080_1504010_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	1.4e-17	33.6
WP_049770186.1\|1504143_1505226_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	4.0e-45	33.6
WP_174254346.1\|1505607_1506720_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	2.2e-46	35.7
WP_014262873.1\|1506828_1507485_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.0e-43	44.6
WP_014262874.1\|1507695_1508907_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	9.8e-109	50.3
WP_014262875.1\|1508909_1509377_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.7e-46	57.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_016630

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection