CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_014618	[Enterobacter] lignolyticus SCF1, complete sequence	3 crisprs	DinG,csa3,DEDDh,cas3,WYL	0	0	5	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_014618_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014618_1

2328957-2329090

Orphan

Consensus_repeat	Method
GCTTTGCGCGGGTCGACCGGTTCCGCTTCAGGCGCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014618_1

>merge|NC_014618|1|2328957-2329090|CRISPRCasFinder
GCTTTGCGCGGGTCGACCGGTTCCGCTTCAGGCGCCGGGGCTGGCGGCTGCCCGGCCTTGCGCGCTTTGGCGCGGGCAATGGCGGCTTCGACGGCGGCTTTGCGCGGGTCGACCGGTTCCGCCTCAGGCGCCGG

>NC_014618|1|1|2328957-2329090|CRISPRCasFinder
GCTTTGCGCGGGTCGACCGGTTCCGCTTCAGGCGCCGG	GGCTGGCGGCTGCCCGGCCTTGCGCGCTTTGGCGCGGGCAATGGCGGCTTCGACGGCG
GCTTTGCGCGGGTCGACCGGTTCCGCCTCAGGCGCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_014618.1\|WP_013366196.1\|2333516_2334560_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|183212
NC_014618.1\|WP_013366190.1\|2327743_2328796_-\|electron-transport-complex-subunit-RsxD	unknown	unknown	gnl\|CDD\|234844
NC_014618.1\|WP_013366198.1\|2335692_2336865_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|224090
NC_014618.1\|WP_013366197.1\|2334592_2335594_-\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|236480
NC_014618.1\|WP_013366194.1\|2332064_2332505_-\|DUF2569-domain-containing-protein	unknown	unknown	gnl\|CDD\|371223
NC_014618.1\|WP_013366189.1\|2327114_2327735_-\|electron-transport-complex-subunit-RsxG	unknown	unknown	gnl\|CDD\|179350
NC_014618.1\|WP_013366186.1\|2323686_2325192_-\|dipeptide/tripeptide-permease-DtpA	unknown	unknown	gnl\|CDD\|181969
NC_014618.1\|WP_013366184.1\|2322039_2322900_+\|pyridoxal-kinase-PdxY	unknown	unknown	gnl\|CDD\|235592
NC_014618.1\|WP_013366192.1\|2330828_2331404_-\|electron-transport-complex-subunit-RsxB	unknown	unknown	gnl\|CDD\|235347
NC_014618.1\|WP_013366193.1\|2331403_2331985_-\|electron-transport-complex-subunit-RsxA	unknown	unknown	gnl\|CDD\|235352
NC_014618.1\|WP_013366181.1\|2319534_2319864_+\|C-type-lysozyme-inhibitor	unknown	unknown	gnl\|CDD\|236902
NC_014618.1\|WP_013366187.1\|2325777_2326413_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|182661
NC_014618.1\|WP_013366199.1\|2336934_2338527_-\|PTS-maltose-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|182245
NC_014618.1\|WP_013366188.1\|2326409_2327111_-\|electron-transport-complex-subunit-E	unknown	unknown	gnl\|CDD\|237091
NC_014618.1\|WP_071841398.1\|2333177_2333327_-\|division-septum-protein-Blr	unknown	unknown	gnl\|CDD\|380226
NC_014618.1\|WP_013366183.1\|2320704_2321979_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NC_014618.1\|WP_013366195.1\|2332586_2332802_-\|transcription-modulator-YdgT	unknown	unknown	gnl\|CDD\|182426
NC_014618.1\|WP_044612115.1\|2319921_2320578_+\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|235555
NC_014618.1\|WP_013366200.1\|2338700_2339729_+\|Mal-regulon-transcriptional-regulator-MalI	unknown	unknown	gnl\|CDD\|182193
NC_014618.1\|WP_013366185.1\|2322939_2323545_-\|glutathione-transferase-GstA	unknown	unknown	gnl\|CDD\|182533

Protein	Function_ID	Function_description	E-value
NC_014618.1\|WP_013366196.1\|2333516_2334560_+\|oxidoreductase	gnl\|CDD\|183212	PRK11579, PRK11579, putative oxidoreductase; Provisional.	0
NC_014618.1\|WP_013366190.1\|2327743_2328796_-\|electron-transport-complex-subunit-RsxD	gnl\|CDD\|234844	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed.	0
NC_014618.1\|WP_013366198.1\|2335692_2336865_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	1.65319e-176
NC_014618.1\|WP_013366197.1\|2334592_2335594_-\|adenosine-deaminase	gnl\|CDD\|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	3.6251e-156
NC_014618.1\|WP_013366194.1\|2332064_2332505_-\|DUF2569-domain-containing-protein	gnl\|CDD\|371223	pfam10754, DUF2569, Protein of unknown function (DUF2569). This family is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homolog thereof.	5.74094e-35
NC_014618.1\|WP_013366189.1\|2327114_2327735_-\|electron-transport-complex-subunit-RsxG	gnl\|CDD\|179350	PRK01908, PRK01908, electron transport complex protein RnfG; Validated.	3.04487e-136
NC_014618.1\|WP_013366186.1\|2323686_2325192_-\|dipeptide/tripeptide-permease-DtpA	gnl\|CDD\|181969	PRK09584, tppB, dipeptide/tripeptide permease DtpA.	0
NC_014618.1\|WP_013366184.1\|2322039_2322900_+\|pyridoxal-kinase-PdxY	gnl\|CDD\|235592	PRK05756, PRK05756, pyridoxal kinase PdxY.	0
NC_014618.1\|WP_013366192.1\|2330828_2331404_-\|electron-transport-complex-subunit-RsxB	gnl\|CDD\|235347	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional.	8.45416e-126
NC_014618.1\|WP_013366193.1\|2331403_2331985_-\|electron-transport-complex-subunit-RsxA	gnl\|CDD\|235352	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional.	2.91497e-115
NC_014618.1\|WP_013366181.1\|2319534_2319864_+\|C-type-lysozyme-inhibitor	gnl\|CDD\|236902	PRK11372, PRK11372, C-type lysozyme inhibitor.	3.75162e-74
NC_014618.1\|WP_013366187.1\|2325777_2326413_-\|endonuclease-III	gnl\|CDD\|182661	PRK10702, PRK10702, endonuclease III; Provisional.	3.33183e-158
NC_014618.1\|WP_013366199.1\|2336934_2338527_-\|PTS-maltose-transporter-subunit-IICB	gnl\|CDD\|182245	PRK10110, PRK10110, PTS maltose transporter subunit IICB.	0
NC_014618.1\|WP_013366188.1\|2326409_2327111_-\|electron-transport-complex-subunit-E	gnl\|CDD\|237091	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional.	4.80862e-133
NC_014618.1\|WP_071841398.1\|2333177_2333327_-\|division-septum-protein-Blr	gnl\|CDD\|380226	NF033231, small_Blr, division septum protein Blr. Members of this family are Blr, named beta-lactam resistance protein because mutants have heightened sensitivity to beta-lactam antibiotics, but actually involved in cell division. The protein is very small.	1.41361e-20
NC_014618.1\|WP_013366183.1\|2320704_2321979_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NC_014618.1\|WP_013366195.1\|2332586_2332802_-\|transcription-modulator-YdgT	gnl\|CDD\|182426	PRK10391, PRK10391, transcription modulator YdgT.	4.56874e-47
NC_014618.1\|WP_044612115.1\|2319921_2320578_+\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|235555	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase.	1.02348e-122
NC_014618.1\|WP_013366200.1\|2338700_2339729_+\|Mal-regulon-transcriptional-regulator-MalI	gnl\|CDD\|182193	PRK10014, PRK10014, DNA-binding transcriptional repressor MalI; Provisional.	0
NC_014618.1\|WP_013366185.1\|2322939_2323545_-\|glutathione-transferase-GstA	gnl\|CDD\|182533	PRK10542, PRK10542, glutathionine S-transferase; Provisional.	2.09243e-140

>NC_014618.1|WP_013366190.1|2327743_2328796_-|electron-transport-complex-subunit-RsxD
MVFKIASSPYTHNQRQTSRIMLLVILAAVPGIAVQTWFFGWGTLLQLILAAATAWTAEALVLRLRKQRVGQTLGDNSALLTGLLLAVSIPPSAPWWMIVLGTAFAVIIAKQLYGGLGHNPFNPAMIGYVVLLISFPVQMTSWLPPHDIAVSAPGLWDSVQIILFGHTSAGADINSLRMGIDGISQATPLDTFKTSLHAGHSVNDILQLPVYRGALAGVGWQWVNIAWLVGGLFLLWKGAIRWHIPLSFLLSLAICSTLGWIASPESMASPQIHLLSGATMIGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFATLLANITVPLIDYYTRPRVYGHR
>NC_014618.1|WP_013366189.1|2327114_2327735_-|electron-transport-complex-subunit-RsxG
MLNTIRKHGVTLALFAAGATGLTAAINLLTKSTIDVQAEKQQMALFSQVLPQDRYNNNLLKSCYVLNAPALGKGSHKVYIAMMDSAPVAAVMEATAPDGYSGNIQLLVGADFKGTVLGSRVTEHHETPGLGDKIELRHSDWITHFADKVINGANDSRWAVKKDGGDFDQFTGATITPRAVVNAVKRAGLFAETLPSQLNTLSPCEE
>NC_014618.1|WP_013366188.1|2326409_2327111_-|electron-transport-complex-subunit-E
MSEIKDIIVQGLWKNNSSLVQLLGMCPLLAVTSTATNALGLGLATTLVLTLTNLTISLLRRWTPSEIRIPIYVMIIASVVSVVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADGLLGSWAKVLRIEVFHTDTPFLLAMLPPGAFIGLGMLLAVKYLIDERAKRRASARRQSVDVTVDTTPGKAS
>NC_014618.1|WP_013366187.1|2325777_2326413_-|endonuclease-III
MNKEKRLEILTRLRDNNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPQAMLGLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEQHGGNVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCLIEDLCEFKEKVEL
>NC_014618.1|WP_013366186.1|2323686_2325192_-|dipeptide/tripeptide-permease-DtpA
MSTANNKPAESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAAVVYMGMATIAVGNGLFKANPSSLLSTCYAKDDPRLDGAFTMYYMSVNIGSFFSMLATPWLAAKFGWSVAFSLSVVGMLITVVNFAFCKKWVKQYGSKPDFEPVHIGKLLATIVGVVILAAIATWLLHNQGVARAVLGVVALGIICIFAKEAFAMQGAARRKMIVAFILMLEAVIFFVLYSQMPTSLNFFAIRNVEHSILGIAFEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFASDAGIVSVNWLILSYALQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAAIIAGKIANLMAVPENVTDPLMSLDVYGRVFMQIGIATAVIAILMLLTAPKLNRMTQDDSASAKSSETATA
>NC_014618.1|WP_013366185.1|2322939_2323545_-|glutathione-transferase-GstA
MKLFYKPGACSLASHITLRESGLDFSLTGVDLAKKQLENGDDFLKVNPKGQVPALLLDDNTLLTEGVAIMQYIADTKADRQLLAPTGSIARYRTLEWLNYVATELHKGFTPLFRPDTPEDYKPTARALLEKKLQYVNESLQNVEWVSGPRFTIADAYLFTVLRWARAVKLDMSALKNIEAYMARVAARPAVKAALAAEGLN
>NC_014618.1|WP_013366184.1|2322039_2322900_+|pyridoxal-kinase-PdxY
MKNILAIQSHVVFGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPAHLTEIVQGIADIDKLKSCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHALPASDIIVPNLIELEILCGHAVNSVEEAVAAARELIAQGPEIVLVKHLARAGRSAQRFEMLLVTAREAWHISRPLVDFGVRQPVGVGDVTSGLLLVKLLQGASLRDALEHVTAAVYEIMEATHRMGEYELQVVAAQDRIAQPEYAFSATAL
>NC_014618.1|WP_013366183.1|2320704_2321979_+|tyrosine--tRNA-ligase
MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPRAQYVLADQVTRLVHGEEGLAAAKRITESLFNGTLSSLSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYAFVDGDRLYGRYTLLRRGKKNYCLICWK
>NC_014618.1|WP_044612115.1|2319921_2320578_+|pyridoxamine-5'-phosphate-oxidase
MSDNDDLQQIAHLRREYTRGGLRRRDLPAEPLALFERWLGQACEAKLPDPTAMVVATVDENGQPWQRIVLLKQYDEKGLVFFTNLGSRKAHQIEKNPHVSLLFPWHMLERQVMVVGKAERLSTLEEVKYIRSRPRDSQIAAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRITIEQMEFWQGGEHRLHDRFLYQRDNGAWKIDRLAP
>NC_014618.1|WP_013366181.1|2319534_2319864_+|C-type-lysozyme-inhibitor
MLMKKLLLAVVPFMLAGCSYYNQFVERMQTNKLEYQCDEKPLTVNLNNTRQQVSFIYDNKLLNLTQGISASGTRYTDGIYVFWSKGNEATVYKRDRIVLNNCQLQTPKR
>NC_014618.1|WP_013366192.1|2330828_2331404_-|electron-transport-complex-subunit-RsxB
MSAVWIAVIAISLLGLIFGGILGYASRRFAVEDDPVVEKIDELLPQSQCGQCGYPGCRPYAEAVGCQGEKINRCAPGGEAVMLKIAALLNVDPQPADDEASQEPVRMLAVIDEPNCIGCTKCIQACPVDAIVGATRAMHTVVSDLCTGCNLCVAPCPTQCITLLPVKTTTETWKWDLQTIPVRIIPVEHHA
>NC_014618.1|WP_013366193.1|2331403_2331985_-|electron-transport-complex-subunit-RsxA
MTDYLLLFIGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLVYLRTMAFILVIAVVVQFTEMVVRKTSPALYRLLGIFLPLITTNCAVLGVALLNINLGHNFMQSALYGFSAAVGFSLVMVLFAAIRERLVVADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL
>NC_014618.1|WP_013366194.1|2332064_2332505_-|DUF2569-domain-containing-protein
MSENSAERIGGWLIAPLAWLLVALLSATLAVFLYAGSLISPQTLPALRALSSGNMILWGLSFLFAAAMWYYTFWLTVAFFKRRALVPKHYIIWLLISVLLAVKAFAFSPVSDALALRQLLFPLLAAALLVPYFKRSARVKRTFVNP
>NC_014618.1|WP_013366195.1|2332586_2332802_-|transcription-modulator-YdgT
MTVQDYLLKFRKISTLESLEKLFDHLNYSLTNTEEIVNMYRAADHRRAELVSGGRLYDVGQVPKSVWHYVQ
>NC_014618.1|WP_071841398.1|2333177_2333327_-|division-septum-protein-Blr
MALVLTRIVELVGWVVLGVSVLLLIVAHHIDNYQPPEPTAAVQKTTPAS
>NC_014618.1|WP_013366196.1|2333516_2334560_+|oxidoreductase
MSDTIRVGLIGYGYASKTFHAPLISGTSGMTLAAVSSSDAAKVKADWPAVAVVSDPRHLFNDPDIDLIVIPTPNDTHYPLAKAALEAGKHVVVDKPFTVTLSQARELDSLAHGVGRLLSVFHNRRWDSDFLTIKALIAEGALGEITYFESHFDRYRPQVRNRWREQGGPGSGIWYDLGPHLLDQAVSLFGLPVSLTVDLAQLRPGAQSTDYFHAVLAYPLRRVVLHATLLAAAESARYIVHGSRASYVKYGLDPQEDRLKSGERPPLEDWGYDMRDGVVTRVEGEDRVEETWLTVPGNYPAYYAGIRDALNGHAENPVPASQAIQIMELIELGLESAKLRATQCLTR
>NC_014618.1|WP_013366197.1|2334592_2335594_-|adenosine-deaminase
MIDTNLPLTDIHRHLDGNIRAQTILDLGRQHNIALPASSLDALLPHVQVTSSEPDLVSFLSKLDWGVKVLATLDACRRVARENIEDAARNGLHYVELRFSPGYMAMTHHLPVAGVVEAVIAGVREGCREFGVEARLIGIMSRTFGEAACTQELEALLAHRDSITALDLAGDELGFPGGLFLNHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDRALMDFLAEQRIGIESCLTSNIQTSTVASLAQHPLKTFLEHGVLASINTDDPAVQGIDIIHEYTVAAPAAGLSREQIRQAQINGLEIAFLTPQEKQVLIARVQQG
>NC_014618.1|WP_013366198.1|2335692_2336865_-|pyridoxal-phosphate-dependent-aminotransferase
MFDFSTVVDRHGTWCTQWDYVADRFGAPDLLPFTISDMDFATAPCVLDALTRRLAHGVFGYSRWKNDEFLGAIRHWFSRRFNSVIDAESVVYGPSVIYMVSEMIRQWSSPGDGVVVHTPAYDAFFNAIEGNQRRVAAVPLHQTPEGWMCDMDALERVLSDAQNTVLLLCSPHNPTGKVWTRDELSTMAALCEKHGVRVISDEIHMDMVWGAHRHTPWCEVARGDWALFTSGSKSFNIPALTGAWGLIGAADARSDYLHALKGRDGLSSPSVPALVAHIAAYQQGEPWLDALRDYLQENMHYIATALNHAFPELRWQPPQSTYLAWIDLRPLNIDDRLLQKVLIEQQKVAIMPGYTYGEEGNGFVRLNAGCPRSKLERGVQGLINAIHALR
>NC_014618.1|WP_013366199.1|2336934_2338527_-|PTS-maltose-transporter-subunit-IICB
MTTKAAPKITLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVTTLLPWLDTPLLQAIFIWMSKVGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGFVGYAVMNLAVNFWLTAKGILPTTDAAILKANNIQNILGIQSIDTGILGAVIAGIVVWMLHERFHTIRLPDALAFFGGTRFVPIVTTVVMGLVGLAIPLVWPFFAKGINALGYAINSAGDFGPMIFGTGERLLLPFGLHHILVALIRFTEAGGTMDVCGHSVSGALTIFQAQLSCPDTHGFSESATRFLSQGKMPAFLGGLPGAALAMYHCARPENRHKIKGLLISGVIACVVGGTTEPLEFLFLFVAPVLYLIHALLTGLGFTIMAVLGVTIGNTDGNVIDFVVFGILHGLSTKWYLVPVVAAVWFAAYYAIFRFAITRFNIKTPGRDIETASGAEKAAAGATGKSGYNVPAILAALGGAENITTLDNCITRLRLSVNDMSKVDVNALKANRAIGVVQLNQHNLQVVIGPQVQSVKDEMASLMNTVQA
>NC_014618.1|WP_013366200.1|2338700_2339729_+|Mal-regulon-transcriptional-regulator-MalI
MAIAKKVTINDVAHAAGVSVATVSLVLSGKGRISMATGERVNQAIEALGFVRNRQAASLRGAQTGVIGLIVGDLSSPFYAELAAGVIESLESQGKMVFLTQGGRKGEHMLQRFDTLVSQGVDGVVIAGAVDRASELRDKAEDSGVPLVFASRASYLEDVDLIRPDNMQAAQMLTEHLIRRGHQRIAWLGGQSTSLTRAERVGGYCATLLKYGLPFHSEWVVECETSQRQAAEAFSHLLRHNPTITAVVCYNNVVAMGAWLGMLRSGWQSGDESLESYYEQRVALAAFAEVPESALEDAPMSWAITPAREMGQSVAARMLERIDSGKNVVKNQIMPPRLVSTK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_014618_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014618_2

3540741-3540816

Orphan

Consensus_repeat	Method
ATCCGGCCTACAAAAGCAGAGTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014618_2

>merge|NC_014618|2|3540741-3540816|CRISPRCasFinder
ATCCGGCCTACAAAAGCAGAGTTCATCGTGTGCCGGATAAGCGTCAGCGCCATCCGGCCTACAAAAGCAGAGTTCA

>NC_014618|2|2|3540741-3540816|CRISPRCasFinder
ATCCGGCCTACAAAAGCAGAGTTCA	TCGTGTGCCGGATAAGCGTCAGCGCC
ATCCGGCCTACAAAAGCAGAGTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_014618.1\|WP_013367289.1\|3538800_3539763_-\|ferrochelatase	unknown	unknown	gnl\|CDD\|234585
NC_014618.1\|WP_013367285.1\|3532441_3534094_-\|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|236566
NC_014618.1\|WP_013367294.1\|3543837_3545763_-\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|236138
NC_014618.1\|WP_013367296.1\|3546555_3546933_-\|DUF454-family-protein	unknown	unknown	gnl\|CDD\|182520
NC_014618.1\|WP_013367287.1\|3535710_3537390_+\|Kef-family-K(+)-transporter	unknown	unknown	gnl\|CDD\|182633
NC_014618.1\|WP_013367284.1\|3531921_3532401_+\|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase-YbaK	unknown	unknown	gnl\|CDD\|182634
NC_014618.1\|WP_013367300.1\|3551214_3551862_-\|multidrug-efflux-transporter-transcriptional-repressor-AcrR	unknown	unknown	gnl\|CDD\|182632
NC_014618.1\|WP_013367290.1\|3539943_3540588_-\|adenylate-kinase	unknown	unknown	gnl\|CDD\|234711
NC_014618.1\|WP_013367298.1\|3547533_3547692_+\|pleiotropic-regulatory-protein-RsmS	unknown	unknown	gnl\|CDD\|182920
NC_014618.1\|WP_013367292.1\|3542845_3543451_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NC_014618.1\|WP_013367299.1\|3547727_3551081_-\|mechanosensitive-channel-MscK	unknown	unknown	gnl\|CDD\|236892
NC_014618.1\|WP_013367295.1\|3545853_3546405_-\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NC_014618.1\|WP_013367283.1\|3530913_3531720_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226258
NC_014618.1\|WP_013367286.1\|3534256_3535477_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341031
NC_014618.1\|WP_013367297.1\|3546990_3547518_+\|primosomal-replication-protein-N''	unknown	unknown	gnl\|CDD\|182236
NC_014618.1\|WP_013367282.1\|3528323_3530825_+\|copper-exporting-P-type-ATPase-CopA	unknown	unknown	gnl\|CDD\|182635
NC_014618.1\|WP_013367288.1\|3537422_3538727_-\|inosine/guanosine-kinase	unknown	unknown	gnl\|CDD\|185033
NC_014618.1\|WP_013367291.1\|3540864_3542739_-\|molecular-chaperone-HtpG	unknown	unknown	gnl\|CDD\|235366
NC_014618.1\|WP_013367281.1\|3527795_3528215_-\|Cu(I)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182320
NC_014618.1\|WP_013367293.1\|3543450_3543783_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669

Protein	Function_ID	Function_description	E-value
NC_014618.1\|WP_013367289.1\|3538800_3539763_-\|ferrochelatase	gnl\|CDD\|234585	PRK00035, hemH, ferrochelatase; Reviewed.	2.68881e-166
NC_014618.1\|WP_013367285.1\|3532441_3534094_-\|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase	gnl\|CDD\|236566	PRK09558, ushA, bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed.	0
NC_014618.1\|WP_013367294.1\|3543837_3545763_-\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|236138	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated.	0
NC_014618.1\|WP_013367296.1\|3546555_3546933_-\|DUF454-family-protein	gnl\|CDD\|182520	PRK10527, PRK10527, DUF454 family protein.	6.26127e-71
NC_014618.1\|WP_013367287.1\|3535710_3537390_+\|Kef-family-K(+)-transporter	gnl\|CDD\|182633	PRK10669, PRK10669, putative cation:proton antiport protein; Provisional.	0
NC_014618.1\|WP_013367284.1\|3531921_3532401_+\|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase-YbaK	gnl\|CDD\|182634	PRK10670, PRK10670, Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK.	2.6025e-109
NC_014618.1\|WP_013367300.1\|3551214_3551862_-\|multidrug-efflux-transporter-transcriptional-repressor-AcrR	gnl\|CDD\|182632	PRK10668, PRK10668, DNA-binding transcriptional repressor AcrR; Provisional.	1.64577e-152
NC_014618.1\|WP_013367290.1\|3539943_3540588_-\|adenylate-kinase	gnl\|CDD\|234711	PRK00279, adk, adenylate kinase; Reviewed.	3.23378e-135
NC_014618.1\|WP_013367298.1\|3547533_3547692_+\|pleiotropic-regulatory-protein-RsmS	gnl\|CDD\|182920	PRK11038, PRK11038, hypothetical protein; Provisional.	4.46436e-18
NC_014618.1\|WP_013367292.1\|3542845_3543451_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	1.74131e-120
NC_014618.1\|WP_013367299.1\|3547727_3551081_-\|mechanosensitive-channel-MscK	gnl\|CDD\|236892	PRK11281, PRK11281, mechanosensitive channel MscK.	0
NC_014618.1\|WP_013367295.1\|3545853_3546405_-\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.92768e-101
NC_014618.1\|WP_013367283.1\|3530913_3531720_+\|hypothetical-protein	gnl\|CDD\|226258	COG3735, COG3735, Uncharacterized protein conserved in bacteria [Function unknown].	9.97288e-88
NC_014618.1\|WP_013367286.1\|3534256_3535477_+\|MFS-transporter	gnl\|CDD\|341031	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters. Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.01969e-116
NC_014618.1\|WP_013367297.1\|3546990_3547518_+\|primosomal-replication-protein-N''	gnl\|CDD\|182236	PRK10093, PRK10093, primosomal replication protein N''; Provisional.	3.96134e-59
NC_014618.1\|WP_013367282.1\|3528323_3530825_+\|copper-exporting-P-type-ATPase-CopA	gnl\|CDD\|182635	PRK10671, copA, copper-exporting P-type ATPase CopA.	0
NC_014618.1\|WP_013367288.1\|3537422_3538727_-\|inosine/guanosine-kinase	gnl\|CDD\|185033	PRK15074, PRK15074, inosine/guanosine kinase; Provisional.	0
NC_014618.1\|WP_013367291.1\|3540864_3542739_-\|molecular-chaperone-HtpG	gnl\|CDD\|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NC_014618.1\|WP_013367281.1\|3527795_3528215_-\|Cu(I)-responsive-transcriptional-regulator	gnl\|CDD\|182320	PRK10227, PRK10227, HTH-type transcriptional regulator CueR.	1.17657e-89
NC_014618.1\|WP_013367293.1\|3543450_3543783_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	4.7771e-46

>NC_014618.1|WP_013367290.1|3539943_3540588_-|adenylate-kinase
MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAASGRVYHIKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAQAGNTRYAKVDGTKAVADVRAELEKILG
>NC_014618.1|WP_013367289.1|3538800_3539763_-|ferrochelatase
MRQTKTGILLANLGTPDAPTSDAVKRYLRQFLSDPRVVDTPRLLWWPLLRGVILPLRAPRVAKLYQSVWMEGGSPLMVYSRQQQQALAQRLPQTPVALGMSYGSPSLESAVDELLAQNVDHIVVLPLYPQYSCSTVAAVWNELARILAHKRRIPGISFIRDYADDEGYIRALANSARAAFAAHGEPDLLLLSYHGIPQRYADEGDDYPQRCRDTTRELVSALGIAHDKVMMTFQSRFGREPWLTPYTDETLKMLAEKGVKHVQVMCPGFSADCLETLEEIAVQNREIFLEAGGQKYEYIPALNASADHIDMMVKLTAAVR
>NC_014618.1|WP_013367288.1|3537422_3538727_-|inosine/guanosine-kinase
MKFPGKRKSKHYFPVNARDPLLQQIQPESETSASWVVGIDQTLVDIEAKVDDTFVERYGLSAGHSLVIDDDVADALYQELVRENLITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGGYAYRYLCNTSSRTDLNHLQGVEGPIGRCFTLIGDNGERTFAISPGHMNQLRPESIPESVIAGASALVLTSYLVRCKPGEPMRDATMKAVEYAKKHNVPVVLTLGTRYVIADNPAWWQAFLKENVSILAMNEEEAEALTGIADPLLASDKALDWVDLVLCTAGPIGLYMAGFTEEEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCENPLRIYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANNYHRSNVPNSSKHKFTWLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR
>NC_014618.1|WP_013367287.1|3535710_3537390_+|Kef-family-K(+)-transporter
MHHATPLITTIVGGLVLAFILGMIANKLRISPLVGYLLAGVLSGPFTPGFVADTQLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAVAQIAVATLLGMGLSGLLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLPAVAGMLEKGNTGFGALAIDMGLTIGKVVAFIAIMMLVGRRLVPWILARSAATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPRILIEQPLAVLGTLVIIIFGKSVAAFLLVRMFGHSQRTALTIAASLAQIGEFAFILAGLGMALDLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLDKTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLMAQGIPLVVIETSRTRVDELRERGIRAVLGNAASEEIMALAHLDCARWLLLTIPNGYEAGEIVASAREKCPQIEIIARAHYDDEVAYITERGASQVVMGEREIAKTMMSLLTADEITPAMQAG
>NC_014618.1|WP_013367286.1|3534256_3535477_+|MFS-transporter
MAISESTQPIPGAPASSPKSRTSFGILGAISLSHLLNDMIQSLILAIYPLLQSEFSLSFVQIGMITLTFQLASSLLQPIVGYWTDKYPMPWSLPIGMCFTLSGLVLLALAGSFGTVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSLFQVGGNFGSSLGPLLAAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYAAQHRINKGKPKAPVVNPLPRNKVILAVCVLLLLIFSKYFYMASISSYYTFYLMHKFGLSVQNAQIHLFAFLFAVAAGTVIGGPVGDKIGRKYVIWGSILGVAPFTLVLPYATLWWTGILTVIIGFILASAFSAILVYAQELLPGRIGMVSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLLGMLTIFLPDNRHKA
>NC_014618.1|WP_013367285.1|3532441_3534094_-|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase
MRFLQRGVALAMLAAWSLASLPAQAYEQDKTYKITILHTNDHHGHFWRSEYGEYGLAAQKTLVDSIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYDAMAVGNHEFDNPLSVLRQQEKWVKFPFLSANIYQKSTGERLFKPWALFNRQGLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPAEEAKLVIQELQQTQKPDIILAATHMGHYDNGDHGSNAPGDVEMARSLPAGSLAMIVGGHSQDPVCMASENKKQVDYVPGTPCAPDRQNGIWIVQAHEWGKYVGRADFEFRNGEMKLVHYQLIPVNLKKKVTYDNGQSERVLYTPQIPENPQMLSLLTPFQNKGKAQLEVRIGEVNGRLEGDRSKVRFVQTNMGRLLLAAQMARTGADFAVMSGGGIRDSIDAGKITYKDVLKVQPFGNVLVYADMPGKEAVEYLTAVAQMKPDSGAYPQFANVSFVAKDGKLSDLKIKGEPVDPAKTYRMATLSFNATGGDGYPHIDNKPGYVNTGFIDAEVLKQYIEQNSPLDAGAYEPKGEVSWQ
>NC_014618.1|WP_013367284.1|3531921_3532401_+|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase-YbaK
MTPAVKLLEKNKIPFQIHTYDHDPNETNFGDEVVRKLGLNADRVYKTLLVAMNGDMKQLAVAVTPVATQLDLKKVAKALGAKKVDMADPMVAQRTTGYLVGGISPLGQKKRLPTLIDAPAQTFDTIYVSGGKRGLDIELAADSLAKMLDAKFADIARRD
>NC_014618.1|WP_013367283.1|3530913_3531720_+|hypothetical-protein
MSLLNRIKMLWRTLCGASYSWPALDVILPGNRHLHLVGSIHMGTRDMSPLPPQLLKKIRQADALIVEADVSGSDSPFGSLPDYPPLAGRLAADVLQKLEKQADELGLSLALFDNQPLWQIAMVLQATQAQTLGLRADYGIDYQMLNSVRGTDTRVIELEGAENQVALLRQLPDDGLSLLEDTLTHWHTNARLLQVMIGWWLEQPPTNAAAPLPNTFSETLYDVLMHQRNLAWRDMLLALPPGRYVVAVGALHLYGEGNLPAMLAAAIK
>NC_014618.1|WP_013367282.1|3528323_3530825_+|copper-exporting-P-type-ATPase-CopA
MSHTIDLTLDGLSCGHCVKRVKESLEQRSDVEQADVTVTEAHITGSASAEQLIETIKQAGYGAVVSHPKAKPLAESSIPSEALTAAPPELPAADDIDDSQQLLINGMSCASCVSRVQNALAAVPGVSQARVNLAERTALVMGSASAAELVQAVEKAGYGAEAIEDDQERRERQQQTAVATMKRFRWQAIVALLVGLPVMVWGMIGDNMMVTDANQSLWLGIGLLTLAVMVFAGGHFYTSAWKSLRNGAATMDTLVALGTGVAWLYSMSVNVWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTEEGEITVPLADVQPGMTLRLTTGDRVPVDGEITQGEAWFDEAMLTGEPVPQQKGDSESIHAGTVVQDGSVLFRASRTGSHTTLSRIIRMVRQAQSSKPEIGQLADRISAVFVPTVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIIAGVGRAAEYGVLVRDADALQRASQLDTLVFDKTGTLTEGKPQVVAVVTVNGAEDAQALRLAAALEQGSSHPLAHAILEKAAGQTLPQVSDFRTLRGLGVSGSAEGRALLLGNQALLNEHNVDTASLADEIQAQAARGATPVLLAIDGVVAALLAVRDPLREDSVSALARLHREGYRLVMLTGDNPITANAIAKEAGIDEVIAGVLPDGKAEAIKKLQAEGRQVAMVGDGINDAPALAQAEVGIAMGGGSDVAIETAAITLMRHSLVGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPLTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKA
>NC_014618.1|WP_013367281.1|3527795_3528215_-|Cu(I)-responsive-transcriptional-regulator
MNISDVAKKTGLTSKAIRFYEEKGLVTPPLRGDNGYRSYTQKHLDELTLLRQARQVGFNLEECGELVNLFNDPERHSADVKARTLQKVADIERHIKELQNMRTQLLTLAEACPGDDSAECPIIDNLAGGCHHHKAGSSH
>NC_014618.1|WP_013367291.1|3540864_3542739_-|molecular-chaperone-HtpG
MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTIADNGIGMTRDEVIDHLGTIAKSGTKAFLESMGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGESAESGVFWESQGEGEYTVADITKADRGTEITLHLREGEDDFLNDWRVRSIISKYSDHIALPVEIETQEEKDGETVVSWEKINKAQALWTRNKSEINDDEYNEFYKHIAHDFTDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSNDLPLNVSREILQDSTVTRNLRTALSKRALQMLEKLAKDDAEKYQTFWKQFGLVLKEGPAEDHANQQTIAKLLRFASTHTDSAAQTVSLEEYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMSYLTEFDGKAFQSVAKADESIDKLADDVDESAKEAEKALTPFVERVKTLLGERVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQSVPDVKYIFELNPDHALVKRAADTQDDAQFGEWVELLLDQALFAERGTLEDPNLFIRRMNQLLVS
>NC_014618.1|WP_013367292.1|3542845_3543451_-|recombination-protein-RecR
MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAAETLSEVILATNPTVEGEATANYIAELCEQYGVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIKF
>NC_014618.1|WP_013367293.1|3543450_3543783_-|YbaB/EbfC-family-nucleoid-associated-protein
MFGGKGGLGNLMKQAQQMQEKMQKMQEEIAKLEVTGESGAGLVKVTINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLPPGFKMPF
>NC_014618.1|WP_013367294.1|3543837_3545763_-|DNA-polymerase-III-subunit-gamma/tau
MSYQVLARKWRPQTFADVVGQEHVLTALANGLASGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIELGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPSHVKFLLATTDPQKLPVTILSRCLQFHLKALDVDQIRAQLEHILGEEKINFESRALQLLARAAEGSLRDALSLTDQAIASGDGQLTAQTVSTMLGTLDDAQALSLIEALVAADGERVMTLIHDAASRGAEWEALLVEMQSLLHRIAMVQLSPSALGSDMAAVEHRMRELARTVPPADVQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRKPLPEPEVRAPSFAPAAPGPVTTPAAVPPQATVAPVHDALPDATSQVLAARNQLQRAQGAPKAKKSEPAAASRARPVNNAALERLASVTERVQARPSPSALEQQRPEKKEAYRWKATTIVEEVKEEVATPKALKKALEHEKTPELAAKLAVESVARDAWAAQVSQLKLPKLVEQVALNAWKEQEGAVVRLHLRSSQRHLNNAGAQKALAEALSELTGSAVELTIVEDDNPAVRTPLEWRQAIYEEKLAQAREAIIADNNIQTLRRFFDADLDEESIRPI
>NC_014618.1|WP_013367295.1|3545853_3546405_-|adenine-phosphoribosyltransferase
MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLTERYKNAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIVPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRLEKQGINCYSLVPFPGH
>NC_014618.1|WP_013367296.1|3546555_3546933_-|DUF454-family-protein
MQRIILIIIGWLAVALGTLGVFLPLLPTTPFILLAAWCFARSSPRFHRWLLYRSWFGGYLRHWQQYKAMPPGAKPKAIAVILITFAISLWLVNMLWVRLLLLAILAGLLFFMWRIPVVDSEQQKQ
>NC_014618.1|WP_013367297.1|3546990_3547518_+|primosomal-replication-protein-N''
MKTDLLLQSLNAQLMRLEQDIRPMAFHATLGRRFDRQLFRNQSPFLQACLEEARENLRALEHAVAQRQTAQVVWLAEHLAAQLEAIARESAAWALREWDSGSPTLTRWQRKRLRHQDYERRLLAMKQAREQQLAQATTLAEQQRLSREIDAFRGRLARCRDALQNIETVLARLTR
>NC_014618.1|WP_013367298.1|3547533_3547692_+|pleiotropic-regulatory-protein-RsmS
MSLENAPDDVKLAVDLIALLEEHAIAPETVLSALEMVKRDFERKLRESAGDA
>NC_014618.1|WP_013367299.1|3547727_3551081_-|mechanosensitive-channel-MscK
MSHNTRWRKSLSAFIVILTCFFGSISLSQARAQNSNDLPDRSDVQKQLATLTKKKDLSPQDKLIEQDLTDTLQMLDKIDRVKDETAQLKQQIEQAPTKMRQAVDGLNALSDADNDTETRKVLAQLSMRQLEARVSDVLDNLQSAQSDLATYNSQLVSLQTQPERVQNAMYNASQQLQQVRNRLNGTTVGEGALRPTQQTMLLVQQVLLNAEIDQQRKSLEGNTVLQDTLQKQRDYVTANSNRLEHQLQLLQEAVNSKRLTLTEKTAKEAMSPDDAARIQANPLVKQELDINHQLSERLIKATENGNQLVQQNIRVKNWLDRALQSERNIKEQISMLKGSLLLSRILYQEQQTLPSADELEDMTNRIADLRLEQFEVNQQRDALFQNDDYVTNLEEGHSNDVNPEVHDALLQVVDMRRELLDQMNKQLGNQLMMAINLQINQQQLVGVSKSLRSILTQQIFWVNSNKPMDWDWFKSFPSALKDQFSKMKITVNWEKAWPAVFIAFLAGLPLLLIAGLIRWRLSWLRAYQQKLASQVGQLRNDSQLNTPKAILIDLIRALPVVMIILAVGLILLTMQLNVSDLLWAFCKKLALFWLVFGLCWKVLEKNGVAVTHFNMPPQLTSHWRRQIVRISLALLPLHFWSVAAELSPLHLMDDVLGQFAIFLNLLAITILVWPMCRESWRDKESHGLRLLTITTLSIVPIALMVLTATGYFYTTLRLSGRWIETVYLVIVWNLLYQTVLRGLSVAARRIAYRRALARRQHLVKEGAEGVEPQEEPSIALEEVNQQTLRITMLVMVALFGVMFWAIWSDLITVFAYLDSITLWHYSVTEAGADVIRNVTLGSLLFALVAGMVALALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYVIIAVGAMTVFGSLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGTFSGTVSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLSDTITRVVIRLGVAYGSDLDKVKEVLLRVAHEHPKVMQDPAPSVFFTTFGASTLDHELRLYVRELRDRSYTVDELNRAIDRLCRENDINIAFNQLEVHLRNEKGDEVTEVKRDVKGDDPTPSQA
>NC_014618.1|WP_013367300.1|3551214_3551862_-|multidrug-efflux-transporter-transcriptional-repressor-AcrR
MARKTKQQALETRQHILDVALRLFSQQGVSSTSLADIAKAAGVTRGAIYWHFKNKSDLFSEIWQLSEFSIADLETEYRAKFPDDPLSVLREILVYILEATVIDERRRLLMEIIFHKCEFVGEMAEVQLVQRGLCLESYDRIEFTLNECMRARLLPVNLLTRRAAILMRGYISGLVENWLFAPESFNLKNEARDYVAILLEMFQFCPTLRAVSPAV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_014618_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014618_3

3824177-3824282

Orphan

Consensus_repeat	Method
TTTTTTATGACGGGCGTCCTGCCCGTCCCCCTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014618_3

>merge|NC_014618|3|3824177-3824282|CRISPRCasFinder
TTTTTTATGACGGGCGTCCTGCCCGTCCCCCTTTGGGCCGCCGCAAGCGACGTTAAAAATCGCTCCCGGCGATTTTTTATGACGGGCGTCCTGCCCGTCCCCCTTT

>NC_014618|3|3|3824177-3824282|CRISPRCasFinder
TTTTTTATGACGGGCGTCCTGCCCGTCCCCCTTT	GGGCCGCCGCAAGCGACGTTAAAAATCGCTCCCGGCGA
TTTTTTATGACGGGCGTCCTGCCCGTCCCCCTTT

Protein	Signature genes	Signature genes Name	Protein_function
NC_014618.1\|WP_013367532.1\|3820407_3821133_-\|UMP-kinase	unknown	unknown	gnl\|CDD\|239787
NC_014618.1\|WP_013367540.1\|3829947_3831462_-\|dGTPase	unknown	unknown	gnl\|CDD\|235320
NC_014618.1\|WP_013367535.1\|3823359_3824154_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NC_014618.1\|WP_013367527.1\|3815168_3816521_-\|sigma-E-protease-regulator-RseP	unknown	unknown	gnl\|CDD\|182723
NC_014618.1\|WP_013367528.1\|3816532_3817390_-\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|183240
NC_014618.1\|WP_013367533.1\|3821281_3822133_-\|elongation-factor-Ts	unknown	unknown	gnl\|CDD\|236491
NC_014618.1\|WP_013367531.1\|3819686_3820244_-\|ribosome-recycling-factor	unknown	unknown	gnl\|CDD\|178850
NC_014618.1\|WP_013367543.1\|3833042_3833666_+\|TRIC-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|182564
NC_014618.1\|WP_013367537.1\|3827010_3827835_+\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	unknown	unknown	gnl\|CDD\|236996
NC_014618.1\|WP_013367541.1\|3831536_3832235_+\|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|180148
NC_014618.1\|WP_013367526.1\|3812725_3815137_-\|outer-membrane-protein-assembly-factor-BamA	unknown	unknown	gnl\|CDD\|236834
NC_014618.1\|WP_013367542.1\|3832227_3833028_+\|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF	unknown	unknown	gnl\|CDD\|179575
NC_014618.1\|WP_013367534.1\|3822255_3822981_-\|30S-ribosomal-protein-S2	unknown	unknown	gnl\|CDD\|235396
NC_014618.1\|WP_013367536.1\|3824314_3826978_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD	unknown	unknown	gnl\|CDD\|235329
NC_014618.1\|WP_013367529.1\|3817402_3818161_-\|(2E,6E)-farnesyl-diphosphate-specific-ditrans,polycis-undecaprenyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|182326
NC_014618.1\|WP_013367545.1\|3834138_3835557_-\|H(+)/Cl(-)-exchange-transporter-ClcA	unknown	unknown	gnl\|CDD\|235385
NC_014618.1\|WP_013367530.1\|3818349_3819546_-\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl\|CDD\|235472
NC_014618.1\|WP_013367539.1\|3828377_3829814_-\|serine-endoprotease-DegP	unknown	unknown	gnl\|CDD\|236802
NC_014618.1\|WP_013367538.1\|3827944_3828334_+\|DUF3461-family-protein	unknown	unknown	gnl\|CDD\|184234
NC_014618.1\|WP_013367544.1\|3833712_3834057_-\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186

Protein	Function_ID	Function_description	E-value
NC_014618.1\|WP_013367532.1\|3820407_3821133_-\|UMP-kinase	gnl\|CDD\|239787	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).	3.092e-146
NC_014618.1\|WP_013367540.1\|3829947_3831462_-\|dGTPase	gnl\|CDD\|235320	PRK04926, dgt, deoxyguanosinetriphosphate triphosphohydrolase; Provisional.	0
NC_014618.1\|WP_013367535.1\|3823359_3824154_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	1.40462e-171
NC_014618.1\|WP_013367527.1\|3815168_3816521_-\|sigma-E-protease-regulator-RseP	gnl\|CDD\|182723	PRK10779, PRK10779, sigma E protease regulator RseP.	0
NC_014618.1\|WP_013367528.1\|3816532_3817390_-\|phosphatidate-cytidylyltransferase	gnl\|CDD\|183240	PRK11624, cdsA, phosphatidate cytidylyltransferase.	0
NC_014618.1\|WP_013367533.1\|3821281_3822133_-\|elongation-factor-Ts	gnl\|CDD\|236491	PRK09377, tsf, elongation factor Ts; Provisional.	2.33393e-156
NC_014618.1\|WP_013367531.1\|3819686_3820244_-\|ribosome-recycling-factor	gnl\|CDD\|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	1.1628e-111
NC_014618.1\|WP_013367543.1\|3833042_3833666_+\|TRIC-cation-channel-family-protein	gnl\|CDD\|182564	PRK10578, PRK10578, hypothetical protein; Provisional.	7.65765e-130
NC_014618.1\|WP_013367537.1\|3827010_3827835_+\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	gnl\|CDD\|236996	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional.	0
NC_014618.1\|WP_013367541.1\|3831536_3832235_+\|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase	gnl\|CDD\|180148	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase.	8.93134e-136
NC_014618.1\|WP_013367526.1\|3812725_3815137_-\|outer-membrane-protein-assembly-factor-BamA	gnl\|CDD\|236834	PRK11067, PRK11067, outer membrane protein assembly factor YaeT; Provisional.	0
NC_014618.1\|WP_013367542.1\|3832227_3833028_+\|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF	gnl\|CDD\|179575	PRK03379, PRK03379, vitamin B12-transporter protein BtuF; Provisional.	2.52289e-164
NC_014618.1\|WP_013367534.1\|3822255_3822981_-\|30S-ribosomal-protein-S2	gnl\|CDD\|235396	PRK05299, rpsB, 30S ribosomal protein S2; Provisional.	1.71378e-172
NC_014618.1\|WP_013367536.1\|3824314_3826978_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD	gnl\|CDD\|235329	PRK05007, PRK05007, bifunctional uridylyltransferase/uridylyl-removing protein GlnD.	0
NC_014618.1\|WP_013367529.1\|3817402_3818161_-\|(2E,6E)-farnesyl-diphosphate-specific-ditrans,polycis-undecaprenyl-diphosphate-synthase	gnl\|CDD\|182326	PRK10240, PRK10240, (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase.	4.10259e-165
NC_014618.1\|WP_013367545.1\|3834138_3835557_-\|H(+)/Cl(-)-exchange-transporter-ClcA	gnl\|CDD\|235385	PRK05277, PRK05277, H(+)/Cl(-) exchange transporter ClcA.	0
NC_014618.1\|WP_013367530.1\|3818349_3819546_-\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl\|CDD\|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
NC_014618.1\|WP_013367539.1\|3828377_3829814_-\|serine-endoprotease-DegP	gnl\|CDD\|236802	PRK10942, PRK10942, serine endoprotease DegP.	0
NC_014618.1\|WP_013367538.1\|3827944_3828334_+\|DUF3461-family-protein	gnl\|CDD\|184234	PRK13677, PRK13677, DUF3461 family protein.	8.7298e-82
NC_014618.1\|WP_013367544.1\|3833712_3834057_-\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	5.06984e-82

>NC_014618.1|WP_013367535.1|3823359_3824154_+|type-I-methionyl-aminopeptidase
MAISIKTPEEIEKMRVAGRLAADVLEMIAPHVQPGVSTGELDRLCNDYIVNEQHAISACLGYHGFPKSVCISINEVVCHGIPDDEKLLKDGDIVNIDVTVIKDEYHGDTSKMFIVGKPTILGERLCRVTQESLYLALKMVKPGIRLRTLGAAIQKYAEAEGFSVVREYCGHGIGRGFHEEPQVLHYDADDGGVVLQPGMTFTVEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRTDDTIPAIISHNE
>NC_014618.1|WP_013367534.1|3822255_3822981_-|30S-ribosomal-protein-S2
MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVATTVREGRSQDLASQAEESFVEAE
>NC_014618.1|WP_013367533.1|3821281_3822133_-|elongation-factor-Ts
MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIITKIDGTYGIILEVNCQTDFVAKDGGFQAFANKVLDAAVAGKITDVEVLKAQFEEERVALVAKIGENINIRRVASLEGDVLGSYQHGARIGVLVAAKGADDELVKQLAMHVAASKPEFVKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMDPSKSVGQLLKEHNADVTGFIRFEVGEGIEKVETDFAAEVAAMSKQS
>NC_014618.1|WP_013367532.1|3820407_3821133_-|UMP-kinase
MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDSLHRAYVNARLMSAIPLNGVCDNYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPSATMYEQLTYNEVLDKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLITE
>NC_014618.1|WP_013367531.1|3819686_3820244_-|ribosome-recycling-factor
MISDIRKDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKEKEISEDDDRRSQDDVQKMTDAAIKKVDAALADKEAELMQF
>NC_014618.1|WP_013367530.1|3818349_3819546_-|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MKQLTVLGSTGSIGCSTLDVVRHNPEHYAVFALVAGKNVSRMIEQCLAFSPRFAVMDDAASAAALKTALQQHGCRTEVMSGQQAACEVAAAGEVDQVMAAIVGAAGLVPTLAAIHAGKTVLLANKESLVTCGRLFMEAVKQSGAQLLPVDSEHNAIFQSLPQTFQHNLGFADLEQNGVSSILLTGSGGPFRETPLSELRAMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASAAQMEVIIHPQSVIHSMVRYRDGSVLAQLGEPDMRTPIAHAMAWPHRVASGVKPLDFCSLSALTFSAPDYQRYPCLKLAMDAFDQGQAATTALNAANEVSVAAFLADSIRFTEIAEINQAVLESLDVREPQSIDEVIDVDARARNAARQQVAHFVS
>NC_014618.1|WP_013367529.1|3817402_3818161_-|(2E,6E)-farnesyl-diphosphate-specific-ditrans,polycis-undecaprenyl-diphosphate-synthase
MLSANQPISENLPAHGCRHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGISALTLYAFSSENWNRPEQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNARIQERIRKSEALTQNNTGLTLNIAANYGGRWDIIQGVQQLAEQVQKGELSPNQITEDLLSQQICMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEPGGENA
>NC_014618.1|WP_013367528.1|3816532_3817390_-|phosphatidate-cytidylyltransferase
MLKYRLISAFVLIPVVIAALFLLPPGGFAIVTLVVCMLAAWEWGQLSGFTSRSQRIWLAVLFGLLLAVMLLLLPEYHHSVNQPIVEIALWASLGWWIAALLLVLFYPGSASFWRHSRTLRLIFGLLTIVPFFWGMLALRAWHYDVNHYSGSLWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWAYGLWANLEVTPSVLLICSVVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLLLLVFRTI
>NC_014618.1|WP_013367527.1|3815168_3816521_-|sigma-E-protease-regulator-RseP
MLSILWNLAAFIIALGVLITVHEFGHFWVARRCGVRVERFSIGFGKGLWRRVDKHGTEFVIALIPLGGYVKMLDERVEPVAPEMRHYAFNNKTVGQRAAIIAAGPVANFIFAIFAYWLVFIIGVPGVRPVVGEITPNSIAATAQIAPGTELKAVDGIETPDWDAVRLALVTKIGDSQTTLTVAPFGSQQRQDKVLDLRHWAFEPDKEDPVASLGIRPRGAQIEPVLAEVQPTSAARKAGLQAGDRIVKVDGQPLTQWMTFVTLVRDNPGKALQLEIERQGSLLSLTLIPDTKPGKEKAEGFAGVVPKVIPLPDEYKTVRQYGPFAAIGEATDKTWQLMKLTVQMLGKLITGDVKLNNLSGPISIAQGAGMSAEFGLIYYLMFLALISVNLGIINLFPLPVLDGGHLLFLAIEKLKGGPVSERVQDLSYRIGSILLVLLMGLALFNDFSRL
>NC_014618.1|WP_013367526.1|3812725_3815137_-|outer-membrane-protein-assembly-factor-BamA
MAMKKLLIASLLFGSATVYGADGFVVKDIHFEGLQRVAVGAALLSMPVRPGDTVTDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTLSDIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAKIQQINIVGNHAFSTDELISNFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYITINVTEGDQYKLSGVAVSGNLAGHSAEIESLTKVQPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSQPEINDADKTVKLHVNVDAGNRYYVRKIRFVGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKDRLNRLGYFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQVGVQQDNWLGTGYSVGINGTKNDYQTYSELSVTNPYFTVDGVSLGGRIFYNDFKADDADLSSYTNKSYGVDGTLGFPINEYNSLRAGLGYVHNDLSNMQPQVAMNRYLDSIGQTTSTTSTDNSFSADDFTFNYGWTYNKLDRGFFPTDGSRVNLNGKVTLPGSDNEFYKISLDTASYFPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNNIGPKAVYYGPNQDNCGSTSTGVCKSEDAVGGNAMAVASLELIVPTPFISDKYANSVRTSFFWDAGSVWDTHWDNTAQMKAAGIPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYEGDKAEQFQFNIGKTW
>NC_014618.1|WP_013367536.1|3824314_3826978_+|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD
MRNSLPDTALPTLDGQPETPVVWPATELACSSIKARLDAFQRWLGDAFDRGISAEQLMDARTEFIDQLLQRLWVHYGFGEVSDAALVAVGGYGRGELHPLSDIDLLILSRKKLPDEQAQKIGELLTLLWDVKLEVGHSVRTLEECLLEGLSDLTVATNLIESRLLIGDVALFLELQKHIFSDGFWPSEKFFAAKIEEQNERHQRYHGTSYNLEPDVKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTEAERTELNECLHLLWRIRFALHLELNRYDNRLLFDRQLSVAQRLNYSGEGNEPVEHMMKDFFRVTRRVGELNQMLLQLFDEAILALTADEKPRPLDDDFQLRGTLIDLRDDTLFMREPQAILRMFYTMVRNSSITGIYSTTLRHLRHARRHLTQPLCYIPEARSLFLSMLRHPGAVSRGLLPMHRHSVLWAYMPQWTHIVGQMQFDLFHAYTVDEHTIRVLLKLESFAKEETRARHPLCVELWPRLNHPELILIAALFHDIAKGRGGDHSILGAQDILTFAELHGLNSRETQLVAWLVRHHLLMSVTAQRRDIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQLRRGVQSMPDMRERVRHHQLQALALLRMDNINEEALHQIWARCRANYFVRHTPNQLAWHARHLLRHDLSKPLILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIVLEPDGSPLSGDRHEAIRRGLEQAITQTTWQPPAPRRQPAKLRHFTVDTEVTFLPTHTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALNNVLQQEVQQRLTAALNPNDKG
>NC_014618.1|WP_013367537.1|3827010_3827835_+|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase
MQQLQNVIESAFERRADITPANADTVTRAAVEQVIALLDSGALRVAEKIDGQWVTHQWLKKAVLLSFRINDNQVIDGAESRYFDKVPMKFANYDEARFQKEGFRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTKIYDRETGEVHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID
>NC_014618.1|WP_013367538.1|3827944_3828334_+|DUF3461-family-protein
MYDNLKSLGITNPDEIDRYSLRQEANNDILKIYFHKDKGEFFAKSVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYVIDELDQICQRDRTEVDLKRKILDDLRHLESVVANKITEIESDLEKLTRNK
>NC_014618.1|WP_013367539.1|3828377_3829814_-|serine-endoprotease-DegP
MKKTTLAMSALALSLGLALSPLSATAGETSSSAATAQQMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDNSPFCQDGSPFQGSPFCQGGPGGGNGGGGSQQEKFMALGSGVIIDAAKGYVVTNNHVVDNATSIKVQLSDGRKFDAKVVGKDPRSDIALIQIQDPKNLTAIKIADSDTLRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNVENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTEQMVKYGQVKRGELGIMGTELSSDLAKAMKVDAQRGAFVSQVMPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKVELGLLRDGKPVTVTLELQQSSQTQVDSSSIFSGIEGAEMSNKGADKGVMVSSVKAGSPAAQIGLKKGDVIMGANQQPVKNIADLRKILDSKPSVLALNIQRGDSSLYLLMQ
>NC_014618.1|WP_013367540.1|3829947_3831462_-|dGTPase
MAKIDFRSKINWRRRFRSPQSAATEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEVLSRLKQRKLLESYGLDELAGPFESIVEMACLMHDIGNPPFGHFGEAAINDWFRQRLWPADAASQPLSDDRCVEGALRLREGEESLNELRRKIRQDVCHFEGNAQGIRLVHTLMRMNLTWAQVGCILKYTRPAWWRGETPATHSYLMKKPGYYFAEEAYIDRLRKELDLAPYNRFPLTWIMEAADDISYCVADLEDAVEKRIFSIEQLYQHLYDAWGQHQKGSLFSQVVENAWEKSRSNSLKHSAEDQFFMYLRVNTLNKLVPYAAQRFIDNLPQVFAGDFNHALLEDDSDCSQLLELYKSVAVKHVFSHPDVEQLELQGYRVISGLLDIYQPLLKLSLRDFSELVEKDRLRHLPIESRLFHKLSTRHRLAYVEAVNKLERHAAEFPIMEYYYRCRLIQDYISGMTDLYAWDEYRRLMAVE
>NC_014618.1|WP_013367541.1|3831536_3832235_+|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase
MKIGIIGAMEEEVTLLRDKIDNRQTITIGGSEIYTGQLNGADVALLKSGIGKVAAAMGAALLIERCKPDVIINTGSAGGLAAELKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFAADARLVDAAENCIKALKLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFGVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVETLVQKLAHA
>NC_014618.1|WP_013367542.1|3832227_3833028_+|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF
MRNRRLRGALALLLLLPAWLLAAPRVITLSPANTELAFAAGITPVGVSSFSDYPPQAAHIEQVASWQGINLERIVALKPDVVLAWRGGNAERQVNQLASLGIKVLWVDTSRIEQIADMLRQLAVWSPEPQKARLAARSLLQEYETLKTRYAQTHKKRVFLQFGTNPLFTSNNDSIQNEVLRLCGGENVFADSRVPWPQISREQVLARHPQVIVTAGDSNDVAHVKQFWGDQLTIPVIVLNTDWFERASPRIILAAKQLCSALAQVN
>NC_014618.1|WP_013367543.1|3833042_3833666_+|TRIC-cation-channel-family-protein
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTDLVVAMVTSMLTILLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFIAGSGPLVAICMGVITGVGGGIIRDVLAREVPMILRTEIYATACIIGGIVHATAHHTFGIPLENAAMLGMIVTLGIRLAAIRWHLKLPTFALDDNGR
>NC_014618.1|WP_013367544.1|3833712_3834057_-|iron-sulfur-cluster-insertion-protein-ErpA
MSDDVALPLQFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQINDGDMTIEKQGVGLVVDPMSLQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI
>NC_014618.1|WP_013367545.1|3834138_3835557_-|H(+)/Cl(-)-exchange-transporter-ClcA
MKAESPSFESQQILRLRRRHVVRQLLNRDKTPLAILLMAAVVGTLAGLAGVAFEKAVNWVQNWRLGSLAHVANYDIIVWPLAFILSALLAMVGYYLVRRFAPEAGGSGIPEIEGALEELRPVRWWRVIPVKFIGGMGTLGAGMVLGREGPTVQLGGNIGRMVLDLFRMRSAEARHTLLATGAAAGLSAAFNAPLAGILFIIEEMRPQFRYNLISIKAVFTGVIMSSIVFRVFNGESALIEVGQLANAPVNTLWLYLILGMIFGCFGPLFNTLVLRTQDLFQRIHGGVTKKWVLVGGLIGGLCGVLGLIQPTAAGGGFNLIPIAAEGNFTIGLLLFIFFSRVITTLLCFSSGAPGGIFAPMLALGTLLGTAFGMAAAACFPAYHLEAGTFAIAGMGALLAASLRAPLTGIILVLEMADNYQLILPMIITCLGATLLAQFLGGKPLYSTILSRTLAKQEAEQAQKAKQEAGENT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1119851 : 1219565

Escherichia_phage(27.27%)

tail,integrase,tRNA,transposase,plate

attL 1133235:1133251|attR 1187326:1187342

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013365092.1\|1119851_1121060_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.9e-50	49.7
WP_013365093.1\|1121292_1122732_-	Na+/H+ antiporter NhaC	NA	NA	NA	NA
WP_013365094.1\|1122731_1123958_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_013365095.1\|1124289_1124538_-	transcriptional regulator	A0A2I7S995	Vibrio_phage	7.3e-19	63.9
WP_013365096.1\|1124646_1124898_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013365097.1\|1124949_1125180_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013365098.1\|1125571_1127353_+	thymidylate synthase	A0A218MKK4	uncultured_virus	6.0e-22	39.7
WP_013365099.1\|1127342_1128272_+	hypothetical protein	NA	NA	NA	NA
WP_013365100.1\|1128283_1129369_-	ImmA/IrrE family metallo-endopeptidase	A0A075BTZ7	Microcystis_phage	7.9e-09	41.7
WP_013365102.1\|1130248_1131334_+	DUF4263 domain-containing protein	NA	NA	NA	NA
WP_013365103.1\|1131667_1132846_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_013365104.1\|1132838_1134884_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
1133235:1133251	attL	NA	NA	NA	NA
WP_013365105.1\|1134883_1137649_-	class I SAM-dependent DNA methyltransferase	Q6NE04	Leptospira_phage	1.8e-121	33.9
WP_157865528.1\|1138523_1139632_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.2e-49	43.8
WP_013365108.1\|1140122_1140464_+	hypothetical protein	NA	NA	NA	NA
WP_013365109.1\|1141404_1142175_+	hypothetical protein	NA	NA	NA	NA
WP_013365110.1\|1142190_1142646_+	hypothetical protein	NA	NA	NA	NA
WP_013365111.1\|1142660_1143143_+	hypothetical protein	NA	NA	NA	NA
WP_013365112.1\|1143529_1143850_+	hypothetical protein	NA	NA	NA	NA
WP_013365113.1\|1143855_1146642_+	hypothetical protein	NA	NA	NA	NA
WP_013365114.1\|1147291_1149091_-	hypothetical protein	NA	NA	NA	NA
WP_013365115.1\|1149994_1150693_-	inovirus Gp2 family protein	NA	NA	NA	NA
WP_013365116.1\|1150935_1152450_-	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_013365117.1\|1152476_1152689_-	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	5.4e-07	45.0
WP_013365118.1\|1152814_1153696_+	hypothetical protein	NA	NA	NA	NA
WP_013365119.1\|1153759_1155001_-\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	9.1e-102	47.3
WP_013365120.1\|1155730_1156213_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.7e-30	48.1
WP_071841377.1\|1156322_1156799_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_013365122.1\|1156788_1157076_+	RnfH family protein	NA	NA	NA	NA
WP_013365123.1\|1157117_1157459_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_013365124.1\|1157608_1159270_-	DNA repair protein RecN	NA	NA	NA	NA
WP_013365125.1\|1159355_1160234_-	NAD(+) kinase	NA	NA	NA	NA
WP_013365127.1\|1160356_1160950_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_013365128.1\|1161001_1162288_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_013365129.1\|1162306_1163098_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_013365130.1\|1163262_1164624_+	signal recognition particle protein	NA	NA	NA	NA
WP_013365131.1\|1164739_1164988_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_013365132.1\|1165006_1165555_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_013365133.1\|1165600_1166368_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_006178051.1\|1166408_1166756_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_044612070.1\|1166870_1167059_-	late control protein B	Q37973	Salmonella_virus	1.9e-19	78.8
WP_013365135.1\|1167133_1168210_-	phage late control D family protein	Q7Y4C6	Escherichia_virus	1.5e-100	51.0
WP_013365136.1\|1168209_1168677_-\|tail	phage tail protein	A0A0F7LBX3	Escherichia_phage	3.7e-48	60.7
WP_013365137.1\|1168695_1170330_-	hypothetical protein	Q858U7	Yersinia_virus	4.2e-46	25.4
WP_013365138.1\|1170322_1170442_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	4.8e-13	84.6
WP_013365139.1\|1170474_1170756_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	9.4e-31	82.6
WP_013365140.1\|1170811_1171330_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	4.5e-87	89.0
WP_013365141.1\|1171342_1172533_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	4.5e-199	86.1
WP_013365142.1\|1172591_1173185_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	2.6e-86	80.2
WP_013365143.1\|1173255_1173681_+\|tail	tail fiber protein	M1TAS6	Escherichia_phage	3.0e-36	54.2
WP_013365144.1\|1173680_1174283_+\|tail	tail assembly protein	A0A218M4J2	Erwinia_phage	7.4e-49	52.3
WP_013365145.1\|1174254_1174689_-\|tail	tail assembly chaperone gp38	Q9MCR5	Enterobacteria_phage	2.0e-19	67.1
WP_013365146.1\|1174691_1175708_-\|tail	variable tail fiber protein	A0A2I8TVA9	Erwinia_phage	7.2e-81	82.8
WP_013365147.1\|1175704_1176316_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	5.5e-84	71.1
WP_013365148.1\|1176308_1177217_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	3.6e-124	75.8
WP_013365149.1\|1177220_1177568_-\|plate	baseplate assembly protein	A0A0F7LDQ1	Escherichia_phage	7.0e-44	74.6
WP_013365150.1\|1177564_1178200_-\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	1.3e-83	70.6
WP_013365151.1\|1178286_1178754_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	2.3e-42	58.1
WP_044611904.1\|1178849_1179275_-	hypothetical protein	O80310	Escherichia_phage	2.9e-23	48.9
WP_013365154.1\|1179274_1179781_-	lysozyme	A0A218M4K3	Erwinia_phage	4.7e-65	69.0
WP_013365155.1\|1179777_1179984_-	primosomal protein	A0A218M4L5	Erwinia_phage	1.0e-18	77.6
WP_013365156.1\|1179974_1180178_-\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.1e-20	65.7
WP_013365157.1\|1180334_1180517_-	hypothetical protein	A0A0M5M1G5	Salmonella_phage	2.8e-20	78.3
WP_013365158.1\|1180620_1182594_-	replication endonuclease	A0A218M4H2	Erwinia_phage	3.0e-240	62.9
WP_013365159.1\|1182590_1182815_-	TraR/DksA family transcriptional regulator	A0A0M4S5Q7	Salmonella_phage	6.6e-19	63.4
WP_013365160.1\|1182814_1183030_-	DUF2732 family protein	NA	NA	NA	NA
WP_013365161.1\|1183096_1183432_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	1.5e-30	62.9
WP_013365162.1\|1183703_1184555_+	phage repressor protein CI	A0A0M4RE65	Salmonella_phage	1.4e-90	59.9
WP_044612073.1\|1184742_1185096_+	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_013365164.1\|1185149_1186514_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_013365165.1\|1186521_1187004_-	OmpA family protein	NA	NA	NA	NA
WP_013365166.1\|1187021_1188242_-	diguanylate cyclase DgcN	A0A127AWB9	Bacillus_phage	4.4e-08	31.7
1187326:1187342	attR	NA	NA	NA	NA
WP_013365167.1\|1188234_1188828_-	YfiR family protein	NA	NA	NA	NA
WP_013365168.1\|1189174_1190245_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	5.6e-92	52.4
WP_013365169.1\|1190255_1191377_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_013365170.1\|1191478_1192639_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_121497579.1\|1192738_1192786_-	hypothetical protein	NA	NA	NA	NA
WP_013365171.1\|1192891_1193224_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_013365172.1\|1193502_1194240_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_013365173.1\|1194370_1195351_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_013365174.1\|1195347_1196079_+	polyphenol oxidase	NA	NA	NA	NA
WP_013365175.1\|1196207_1198781_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.2e-126	35.4
WP_013365176.1\|1204492_1205791_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.2e-43	31.1
WP_013365177.1\|1205794_1206115_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_013365178.1\|1206159_1207515_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_013365179.1\|1207640_1210289_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_044611905.1\|1210324_1211023_-	DTW domain-containing protein	NA	NA	NA	NA
WP_013365181.1\|1211092_1211521_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	7.9e-13	39.3
WP_013365182.1\|1211725_1212784_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_013364229.1\|1212891_1214226_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_013365183.1\|1214257_1214947_-	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.6e-55	53.0
WP_013365184.1\|1215265_1215649_+	autonomous glycyl radical cofactor GrcA	A0A088FS37	Shigella_phage	1.8e-32	69.9
WP_013365185.1\|1215758_1216346_-	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_013365186.1\|1216450_1217335_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_013365187.1\|1217361_1218696_-	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	9.6e-41	29.3
WP_013365188.1\|1218827_1219565_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_2

1757851 : 1766134

Enterobacteria_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013365651.1\|1757851_1759258_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	2.1e-17	32.3
WP_044611922.1\|1759404_1760307_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.4e-45	40.0
WP_013365653.1\|1760700_1761789_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.3e-101	54.3
WP_013365654.1\|1761802_1762684_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.1e-112	68.1
WP_013365655.1\|1762683_1763565_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.4e-40	37.2
WP_013365656.1\|1763571_1764126_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.9e-51	53.6
WP_013365657.1\|1764135_1764912_+	ABC transporter permease	NA	NA	NA	NA
WP_013365658.1\|1764901_1766134_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.6e-12	23.9

DBSCAN-SWA_3

1774433 : 1782478

Shigella_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013365665.1\|1774433_1775537_+	acyltransferase	Q716G0	Shigella_phage	4.9e-14	28.1
WP_157865583.1\|1775533_1776670_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	2.6e-23	29.4
WP_013365667.1\|1776666_1777413_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_013365668.1\|1777888_1779295_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	1.8e-37	27.8
WP_013365669.1\|1779524_1780691_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	5.7e-114	55.0
WP_013365670.1\|1780738_1781743_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	3.7e-29	28.9
WP_013365671.1\|1781878_1782478_-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	A0A2H4UVM0	Bodo_saltans_virus	9.7e-17	30.6

DBSCAN-SWA_4

1953709 : 2037825

Enterobacteria_phage(29.41%)

tail,integrase,tRNA,holin,portal,terminase,bacteriocin,protease

attL 1953623:1953645|attR 1988321:1988343

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1953623:1953645	attL	NA	NA	NA	NA
WP_013365828.1\|1953709_1954726_-\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	4.0e-132	66.3
WP_157865584.1\|1954727_1954955_-	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	8.1e-09	44.3
WP_013365830.1\|1955016_1957233_-	exonuclease	S4TNL0	Salmonella_phage	9.3e-89	40.2
WP_013365831.1\|1957373_1957706_-	hypothetical protein	NA	NA	NA	NA
WP_013365833.1\|1958101_1958356_+	hypothetical protein	NA	NA	NA	NA
WP_013365834.1\|1958874_1959264_-	helix-turn-helix domain-containing protein	K7PH19	Enterobacteria_phage	1.4e-19	63.9
WP_013365835.1\|1959372_1959588_+	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.0e-16	56.5
WP_013365836.1\|1959597_1960152_+	hypothetical protein	NA	NA	NA	NA
WP_013365837.1\|1960206_1961040_+	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	5.1e-64	51.8
WP_013365838.1\|1961042_1961783_+	ATP-binding protein	H6WRX8	Salmonella_phage	3.2e-94	69.6
WP_013365839.1\|1961802_1962225_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_013365840.1\|1962227_1962563_+	DUF977 family protein	H6WRX9	Salmonella_phage	1.6e-16	44.0
WP_013365841.1\|1962559_1962913_+	hypothetical protein	NA	NA	NA	NA
WP_013365842.1\|1962905_1963559_+	hypothetical protein	A0A077SLQ8	Escherichia_phage	1.8e-40	47.4
WP_013365843.1\|1963555_1963735_+	hypothetical protein	NA	NA	NA	NA
WP_013365844.1\|1963734_1963992_+	hypothetical protein	NA	NA	NA	NA
WP_013365845.1\|1963988_1965968_+	DNA methyltransferase	H9C171	Pectobacterium_phage	1.4e-200	52.6
WP_013365847.1\|1966688_1966922_+	DinI family protein	K7PM44	Enterobacteria_phage	4.0e-27	75.3
WP_013365849.1\|1967341_1967548_+	hypothetical protein	H6WRY8	Salmonella_phage	6.9e-15	57.6
WP_013365850.1\|1967544_1967916_+	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	3.4e-44	67.5
WP_013365851.1\|1967900_1968938_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.7e-101	50.1
WP_013365852.1\|1968948_1969296_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	3.7e-53	86.4
WP_013365853.1\|1969323_1969875_-	hypothetical protein	NA	NA	NA	NA
WP_013365854.1\|1970386_1970758_+	hypothetical protein	NA	NA	NA	NA
WP_013365855.1\|1970779_1971043_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_013365856.1\|1971202_1971598_+	membrane protein	G8C7V8	Escherichia_phage	2.9e-46	76.2
WP_013365857.1\|1971584_1971866_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	7.7e-33	72.0
WP_013365858.1\|1971880_1972366_+	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	1.2e-65	71.4
WP_157865586.1\|1972383_1972935_+	hypothetical protein	K7PHH7	Enterobacteria_phage	5.7e-48	62.3
WP_044611930.1\|1973008_1973209_+	hypothetical protein	A0A1W6JPG4	Morganella_phage	1.0e-10	52.3
WP_013365860.1\|1973477_1973966_+	DUF1441 family protein	K7PJY2	Enterobacterial_phage	1.2e-68	85.2
WP_013365861.1\|1973965_1976068_+\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	87.3
WP_013365862.1\|1976064_1976280_+	hypothetical protein	A5LH28	Enterobacteria_phage	2.6e-25	81.4
WP_013365863.1\|1976276_1977785_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.2e-254	85.9
WP_013365864.1\|1977729_1979739_+\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	87.6
WP_013365865.1\|1979824_1980148_+	DUF2190 family protein	K7PJY3	Enterobacterial_phage	2.2e-36	72.0
WP_013365866.1\|1980140_1980416_+	DNA breaking-rejoining protein	K7PH55	Enterobacterial_phage	4.0e-26	71.2
WP_013365867.1\|1980426_1980981_+\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	6.5e-60	70.1
WP_013365868.1\|1980977_1981376_+\|tail	tail protein	K7PHM6	Enterobacterial_phage	6.2e-44	64.3
WP_013365869.1\|1981383_1982121_+\|tail	phage tail protein	O64327	Escherichia_phage	5.8e-96	72.7
WP_013365870.1\|1982158_1982566_+\|tail	phage minor tail protein G	K7P7M5	Enterobacteria_phage	5.2e-30	68.6
WP_071841391.1\|1982574_1982895_+\|tail	phage tail assembly protein T	K7PHE1	Enterobacteria_phage	4.5e-37	70.8
WP_013365872.1\|1982872_1985392_+\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	0.0e+00	75.7
WP_013365873.1\|1985394_1985742_+	hypothetical protein	K7PJT2	Enterobacteria_phage	1.4e-36	66.1
WP_013365874.1\|1985738_1986494_+\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	3.8e-127	84.5
WP_013365875.1\|1986495_1987206_+	peptidase P60	K7PGR2	Enterobacteria_phage	9.1e-131	87.7
WP_013365876.1\|1987237_1987663_+	hypothetical protein	NA	NA	NA	NA
WP_044611932.1\|1987715_1988303_+\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	2.6e-75	76.1
WP_013365878.1\|1988354_1991882_+	DUF1983 domain-containing protein	O64335	Escherichia_phage	0.0e+00	81.2
1988321:1988343	attR	NA	NA	NA	NA
WP_013365879.1\|1991909_1993583_+	hypothetical protein	K7P7B1	Enterobacteria_phage	9.9e-43	66.2
WP_013365880.1\|1993579_1993969_+\|tail	tail assembly chaperone gp38	I7LEG3	Yersinia_phage	4.6e-36	55.2
WP_013365881.1\|1994116_1994536_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.6e-32	56.9
WP_013365882.1\|1994538_1995807_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.9e-208	82.5
WP_013365883.1\|1995799_1996471_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.6e-76	57.2
WP_013365884.1\|1996925_1997591_+	YecA family protein	NA	NA	NA	NA
WP_013365885.1\|1997633_1998845_-	tyrosine transporter TyrP	NA	NA	NA	NA
WP_013365886.1\|1999037_1999277_+	YecH family protein	NA	NA	NA	NA
WP_013365887.1\|1999310_1999808_-	non-heme ferritin	NA	NA	NA	NA
WP_013365888.1\|1999996_2000338_-	hypothetical protein	NA	NA	NA	NA
WP_013365889.1\|2000561_2001200_+	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA
WP_013365890.1\|2001223_2002645_-	MFS transporter	NA	NA	NA	NA
WP_077629254.1\|2002851_2002938_+	stress response protein AzuC	NA	NA	NA	NA
WP_013365891.1\|2003021_2003273_+	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_013365892.1\|2003324_2004668_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
WP_013365893.1\|2004850_2005354_-	non-heme ferritin-like protein	NA	NA	NA	NA
WP_013365894.1\|2006115_2007096_+	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013365895.1\|2007144_2008659_+	L-arabinose ABC transporter ATP-binding protein AraG	A0A285PWH2	Cedratvirus	4.8e-12	29.2
WP_013365896.1\|2008673_2009654_+	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_013365897.1\|2009806_2010238_-	universal stress protein UspC	NA	NA	NA	NA
WP_077264264.1\|2011025_2011385_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_013365899.1\|2011387_2011966_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_013365900.1\|2012088_2012979_+	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_013365901.1\|2012975_2013905_+	flagellar motor protein MotB	NA	NA	NA	NA
WP_013365902.1\|2013909_2015943_+	chemotaxis protein CheA	NA	NA	NA	NA
WP_013365903.1\|2015964_2016468_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_013365904.1\|2016637_2018299_+	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	5.3e-12	28.7
WP_013365905.1\|2018335_2019937_+	methyl-accepting chemotaxis protein IV	A0A2H4J162	uncultured_Caudovirales_phage	1.2e-08	64.3
WP_013365906.1\|2019957_2020824_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_013365907.1\|2020820_2021870_+	chemotaxis response regulator protein-glutamate methylesterase	Q56AR1	Bacillus_thuringiensis_phage	4.6e-06	33.6
WP_013365908.1\|2021885_2022275_+	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	1.0e-06	32.2
WP_013365909.1\|2022286_2022931_+	protein phosphatase CheZ	NA	NA	NA	NA
WP_044612106.1\|2023072_2024227_+	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_013365911.1\|2024219_2026298_+	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_013365912.1\|2026297_2026690_+	flagellar protein FlhE	NA	NA	NA	NA
WP_013365913.1\|2026686_2028588_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_013365914.1\|2028744_2030478_-\|tRNA	arginine--tRNA ligase	A0A2K9L2F0	Tupanvirus	2.3e-82	33.8
WP_013365915.1\|2030721_2031297_+	VOC family protein	NA	NA	NA	NA
WP_013365916.1\|2031363_2032107_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_013365917.1\|2032201_2033176_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_013365918.1\|2033172_2033916_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	NA	NA	NA
WP_013365919.1\|2033953_2034349_-	membrane protein	NA	NA	NA	NA
WP_013365920.1\|2034401_2035220_-	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	2.6e-57	81.1
WP_013365921.1\|2035216_2035783_-	hydrolase	NA	NA	NA	NA
WP_013365922.1\|2036052_2037825_+\|tRNA	aspartate--tRNA ligase	A0A2K9L3L6	Tupanvirus	6.2e-11	28.4

DBSCAN-SWA_5

2211191 : 2220002

Tupanvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013366082.1\|2211191_2213120_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.3e-127	36.8
WP_013366083.1\|2213123_2213666_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.7e-15	33.1
WP_001124225.1\|2213763_2213961_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_013366084.1\|2214010_2214367_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_001386830.1\|2214488_2214533_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_013366085.1\|2214647_2215631_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	3.8e-34	38.5
WP_013366086.1\|2215646_2218034_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	3.6e-06	26.0
WP_006820203.1\|2218038_2218338_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
WP_013366087.1\|2218440_2219421_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_013366088.1\|2219450_2220002_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	3.3e-19	33.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014618

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection