CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017161	Hydrogenobacter thermophilus TK-6, complete sequence	1 crisprs	csa3,TnpB_regular.1,cas3,DinG,Cas14u_CAS-V,cas2,cas1,cas4,cas5,cas7,cas8b1,cas6,DEDDh,Cas14b_CAS-V-F,cas14k	1	0	3	0

1. NC_017161

CRISPR-Cas detection and classification

Crispr_ID: NC_017161_1

• CRISPR_ID: NC_017161_1
• CRISPR_location: 1122535-1124777
• CRISPR_type: TypeI-B
• Repeat_type: NA
• Spacer_info: 33 spacers
• Cas_protein_info: cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6

Consensus repeat of NC_017161_1

Consensus_repeat	Method
GTTTCAATCCCTTATAGGCACCTAATAAAC	CRISPRCasFinder
GTTTCAATCCCTTATAGGCACCTAATAAAC	CRT
GTTTCAATCCCTTATAGGCACCTAATAAAC	PILER-CR

spacers of NC_017161_1

>1.1|1122565|36|NC_017161|CRISPRCasFinder,CRT
GTCCCCGGTGGACCAAACGCCTTTTTTACACGCATC
>1.2|1122631|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
TTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCC
>1.3|1122698|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
CGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCG
>1.4|1122765|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
>1.5|1122832|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
TTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCC
>1.6|1122899|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
CGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCG
>1.7|1122966|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
>1.8|1123033|36|NC_017161|CRISPRCasFinder,CRT,PILER-CR
TGAGATATGTAGAGCAGCTACAGGAGGCAAAGTTCA
>1.9|1123099|36|NC_017161|CRISPRCasFinder,CRT,PILER-CR
ACACCTTCCAAGAAAGGCAGTCAGCGCCTTTGAGGT
>1.10|1123165|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
GTGAAGCGCCGCCAAATGAATAGCGAGCCACATTTAA
>1.11|1123232|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
GTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGA
>1.12|1123299|38|NC_017161|CRISPRCasFinder,CRT,PILER-CR
GCATGAGCTGCAAGGATTTTCCAGCGAGCCACATTTAG
>1.13|1123367|36|NC_017161|CRISPRCasFinder,CRT,PILER-CR
AGAGTATGTTTAGCTTTTCTTGGGTAGCCTTGACGA
>1.14|1123433|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
TTCTTTCTCGTGTTCTTTCTTATTTTCCTGATATCGC
>1.15|1123500|36|NC_017161|CRISPRCasFinder,CRT,PILER-CR
GTGCTCGGAAGACAAAGGCTCGTACAACCAAACAGC
>1.16|1123566|36|NC_017161|CRISPRCasFinder,CRT,PILER-CR
TGTTCAAAGCTTTGAGTATCAAGTTCTAATACTTTC
>1.17|1123632|36|NC_017161|CRISPRCasFinder,CRT,PILER-CR
AATACACTTTTCTTTGAGGCAGGGGGGGGATATACA
>1.18|1123698|38|NC_017161|CRISPRCasFinder,CRT,PILER-CR
TCCTGCAACACTGTCATTTGCATCCAGCGCAATCCCAG
>1.19|1123766|38|NC_017161|CRISPRCasFinder,CRT,PILER-CR
TCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGA
>1.20|1123834|40|NC_017161|CRISPRCasFinder,CRT,PILER-CR
ATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCT
>1.21|1123904|38|NC_017161|CRISPRCasFinder,CRT,PILER-CR
TCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGA
>1.22|1123972|40|NC_017161|CRISPRCasFinder,CRT,PILER-CR
ATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCT
>1.23|1124042|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
CAAATCCTTGAGAGGCAACCAAAAGAGATGTGGAACA
>1.24|1124109|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
ACTCCTTATTGATCATAGCGTTTTTGATGATATATGC
>1.25|1124176|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
CATAGGCATTGACGAAGGGGATATCTACTTTACCGCC
>1.26|1124243|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
ATGAATATCTTTTTTTGTTTTTCGTAGGCGTGGTAGA
>1.27|1124310|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
ACAGAAGAAAACAGCTCGCCTTCTATCCAAACTTTCC
>1.28|1124377|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
GGGTATACTTGAGAGAGAAATTTCAGGACCAAAAATC
>1.29|1124444|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
CCCGGGGGTTTAAAGGGGACCTTCACTTATATATACA
>1.30|1124511|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
TATTCCACCCTTTTCCCTTTTGCCCTGCTGTTCTTCA
>1.31|1124578|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
AAGAATTATGCATTTTTCCAGTTTTTGGAATTTTGCA
>1.32|1124645|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR
GTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGA
>1.33|1124712|36|NC_017161|CRISPRCasFinder,CRT,PILER-CR
TTCCGGAAGCAAGCGAGGAACTTATTGACGGATTAA

CRISPR arrays and Neighbor proteins around NC_017161_1

CRISPR arrays

The CRISPR arrays of NC_017161_1

>merge|NC_017161|1|1122535-1124777|CRISPRCasFinder,CRT,PILER-CR
GATAAGGACCCTTATAGGCACCTAATAAACGTCCCCGGTGGACCAAACGCCTTTTTTACACGCATCGTTTCAATCCCTTATAGGCACCTAATAAACTTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCCGTTTCAATCCCTTATAGGCACCTAATAAACCGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCGGTTTCAATCCCTTATAGGCACCTAATAAACATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAAGTTTCAATCCCTTATAGGCACCTAATAAACTTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCCGTTTCAATCCCTTATAGGCACCTAATAAACCGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCGGTTTCAATCCCTTATAGGCACCTAATAAACATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAAGTTTCAATCCCTTATAGGCACCTAATAAACTGAGATATGTAGAGCAGCTACAGGAGGCAAAGTTCAGTTTCAATCCCTTATAGGCACCTAATAAACACACCTTCCAAGAAAGGCAGTCAGCGCCTTTGAGGTGTTTCAATCCCTTATAGGCACCTAATAAACGTGAAGCGCCGCCAAATGAATAGCGAGCCACATTTAAGTTTCAATCCCTTATAGGCACCTAATAAACGTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGAGTTTCAATCCCTTATAGGCACCTAATAAACGCATGAGCTGCAAGGATTTTCCAGCGAGCCACATTTAGGTTTCAATCCCTTATAGGCACCTAATAAACAGAGTATGTTTAGCTTTTCTTGGGTAGCCTTGACGAGTTTCAATCCCTTATAGGCACCTAATAAACTTCTTTCTCGTGTTCTTTCTTATTTTCCTGATATCGCGTTTCAATCCCTTATAGGCACCTAATAAACGTGCTCGGAAGACAAAGGCTCGTACAACCAAACAGCGTTTCAATCCCTTATAGGCACCTAATAAACTGTTCAAAGCTTTGAGTATCAAGTTCTAATACTTTCGTTTCAATCCCTTATAGGCACCTAATAAACAATACACTTTTCTTTGAGGCAGGGGGGGGATATACAGTTTCAATCCCTTATAGGCACCTAATAAACTCCTGCAACACTGTCATTTGCATCCAGCGCAATCCCAGGTTTCAATCCCTTATAGGCACCTAATAAACTCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGAGTTTCAATCCCTTATAGGCACCTAATAAACATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCTGTTTCAATCCCTTATAGGCACCTAATAAACTCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGAGTTTCAATCCCTTATAGGCACCTAATAAACATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCTGTTTCAATCCCTTATAGGCACCTAATAAACCAAATCCTTGAGAGGCAACCAAAAGAGATGTGGAACAGTTTCAATCCCTTATAGGCACCTAATAAACACTCCTTATTGATCATAGCGTTTTTGATGATATATGCGTTTCAATCCCTTATAGGCACCTAATAAACCATAGGCATTGACGAAGGGGATATCTACTTTACCGCCGTTTCAATCCCTTATAGGCACCTAATAAACATGAATATCTTTTTTTGTTTTTCGTAGGCGTGGTAGAGTTTCAATCCCTTATAGGCACCTAATAAACACAGAAGAAAACAGCTCGCCTTCTATCCAAACTTTCCGTTTCAATCCCTTATAGGCACCTAATAAACGGGTATACTTGAGAGAGAAATTTCAGGACCAAAAATCGTTTCAATCCCTTATAGGCACCTAATAAACCCCGGGGGTTTAAAGGGGACCTTCACTTATATATACAGTTTCAATCCCTTATAGGCACCTAATAAACTATTCCACCCTTTTCCCTTTTGCCCTGCTGTTCTTCAGTTTCAATCCCTTATAGGCACCTAATAAACAAGAATTATGCATTTTTCCAGTTTTTGGAATTTTGCAGTTTCAATCCCTTATAGGCACCTAATAAACGTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGAGTTTCAATCCCTTATAGGCACCTAATAAACTTCCGGAAGCAAGCGAGGAACTTATTGACGGATTAAGTTTCAATCCCTTATAGGCACCTAATAAAC

>NC_017161|1|1|1122535-1124777|CRISPRCasFinder
GATAAGGACCCTTATAGGCACCTAATAAAC	GTCCCCGGTGGACCAAACGCCTTTTTTACACGCATC
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCG
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCG
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TGAGATATGTAGAGCAGCTACAGGAGGCAAAGTTCA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ACACCTTCCAAGAAAGGCAGTCAGCGCCTTTGAGGT
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTGAAGCGCCGCCAAATGAATAGCGAGCCACATTTAA
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	GCATGAGCTGCAAGGATTTTCCAGCGAGCCACATTTAG
GTTTCAATCCCTTATAGGCACCTAATAAAC	AGAGTATGTTTAGCTTTTCTTGGGTAGCCTTGACGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTCTTTCTCGTGTTCTTTCTTATTTTCCTGATATCGC
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTGCTCGGAAGACAAAGGCTCGTACAACCAAACAGC
GTTTCAATCCCTTATAGGCACCTAATAAAC	TGTTCAAAGCTTTGAGTATCAAGTTCTAATACTTTC
GTTTCAATCCCTTATAGGCACCTAATAAAC	AATACACTTTTCTTTGAGGCAGGGGGGGGATATACA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TCCTGCAACACTGTCATTTGCATCCAGCGCAATCCCAG
GTTTCAATCCCTTATAGGCACCTAATAAAC	TCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCT
GTTTCAATCCCTTATAGGCACCTAATAAAC	TCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCT
GTTTCAATCCCTTATAGGCACCTAATAAAC	CAAATCCTTGAGAGGCAACCAAAAGAGATGTGGAACA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ACTCCTTATTGATCATAGCGTTTTTGATGATATATGC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CATAGGCATTGACGAAGGGGATATCTACTTTACCGCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATGAATATCTTTTTTTGTTTTTCGTAGGCGTGGTAGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ACAGAAGAAAACAGCTCGCCTTCTATCCAAACTTTCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	GGGTATACTTGAGAGAGAAATTTCAGGACCAAAAATC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CCCGGGGGTTTAAAGGGGACCTTCACTTATATATACA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TATTCCACCCTTTTCCCTTTTGCCCTGCTGTTCTTCA
GTTTCAATCCCTTATAGGCACCTAATAAAC	AAGAATTATGCATTTTTCCAGTTTTTGGAATTTTGCA
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTCCGGAAGCAAGCGAGGAACTTATTGACGGATTAA
GTTTCAATCCCTTATAGGCACCTAATAAAC

>NC_017161|1|1|1122535-1124777|CRT
GATAAGGACCCTTATAGGCACCTAATAAAC	GTCCCCGGTGGACCAAACGCCTTTTTTACACGCATC
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCG
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCG
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TGAGATATGTAGAGCAGCTACAGGAGGCAAAGTTCA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ACACCTTCCAAGAAAGGCAGTCAGCGCCTTTGAGGT
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTGAAGCGCCGCCAAATGAATAGCGAGCCACATTTAA
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	GCATGAGCTGCAAGGATTTTCCAGCGAGCCACATTTAG
GTTTCAATCCCTTATAGGCACCTAATAAAC	AGAGTATGTTTAGCTTTTCTTGGGTAGCCTTGACGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTCTTTCTCGTGTTCTTTCTTATTTTCCTGATATCGC
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTGCTCGGAAGACAAAGGCTCGTACAACCAAACAGC
GTTTCAATCCCTTATAGGCACCTAATAAAC	TGTTCAAAGCTTTGAGTATCAAGTTCTAATACTTTC
GTTTCAATCCCTTATAGGCACCTAATAAAC	AATACACTTTTCTTTGAGGCAGGGGGGGGATATACA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TCCTGCAACACTGTCATTTGCATCCAGCGCAATCCCAG
GTTTCAATCCCTTATAGGCACCTAATAAAC	TCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCT
GTTTCAATCCCTTATAGGCACCTAATAAAC	TCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCT
GTTTCAATCCCTTATAGGCACCTAATAAAC	CAAATCCTTGAGAGGCAACCAAAAGAGATGTGGAACA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ACTCCTTATTGATCATAGCGTTTTTGATGATATATGC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CATAGGCATTGACGAAGGGGATATCTACTTTACCGCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATGAATATCTTTTTTTGTTTTTCGTAGGCGTGGTAGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ACAGAAGAAAACAGCTCGCCTTCTATCCAAACTTTCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	GGGTATACTTGAGAGAGAAATTTCAGGACCAAAAATC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CCCGGGGGTTTAAAGGGGACCTTCACTTATATATACA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TATTCCACCCTTTTCCCTTTTGCCCTGCTGTTCTTCA
GTTTCAATCCCTTATAGGCACCTAATAAAC	AAGAATTATGCATTTTTCCAGTTTTTGGAATTTTGCA
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTCCGGAAGCAAGCGAGGAACTTATTGACGGATTAA
GTTTCAATCCCTTATAGGCACCTAATAAAC

>NC_017161|1|1|1122601-1124777|PILER-CR
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCG
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCG
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TGAGATATGTAGAGCAGCTACAGGAGGCAAAGTTCA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ACACCTTCCAAGAAAGGCAGTCAGCGCCTTTGAGGT
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTGAAGCGCCGCCAAATGAATAGCGAGCCACATTTAA
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	GCATGAGCTGCAAGGATTTTCCAGCGAGCCACATTTAG
GTTTCAATCCCTTATAGGCACCTAATAAAC	AGAGTATGTTTAGCTTTTCTTGGGTAGCCTTGACGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTCTTTCTCGTGTTCTTTCTTATTTTCCTGATATCGC
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTGCTCGGAAGACAAAGGCTCGTACAACCAAACAGC
GTTTCAATCCCTTATAGGCACCTAATAAAC	TGTTCAAAGCTTTGAGTATCAAGTTCTAATACTTTC
GTTTCAATCCCTTATAGGCACCTAATAAAC	AATACACTTTTCTTTGAGGCAGGGGGGGGATATACA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TCCTGCAACACTGTCATTTGCATCCAGCGCAATCCCAG
GTTTCAATCCCTTATAGGCACCTAATAAAC	TCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCT
GTTTCAATCCCTTATAGGCACCTAATAAAC	TCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCT
GTTTCAATCCCTTATAGGCACCTAATAAAC	CAAATCCTTGAGAGGCAACCAAAAGAGATGTGGAACA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ACTCCTTATTGATCATAGCGTTTTTGATGATATATGC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CATAGGCATTGACGAAGGGGATATCTACTTTACCGCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	ATGAATATCTTTTTTTGTTTTTCGTAGGCGTGGTAGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	ACAGAAGAAAACAGCTCGCCTTCTATCCAAACTTTCC
GTTTCAATCCCTTATAGGCACCTAATAAAC	GGGTATACTTGAGAGAGAAATTTCAGGACCAAAAATC
GTTTCAATCCCTTATAGGCACCTAATAAAC	CCCGGGGGTTTAAAGGGGACCTTCACTTATATATACA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TATTCCACCCTTTTCCCTTTTGCCCTGCTGTTCTTCA
GTTTCAATCCCTTATAGGCACCTAATAAAC	AAGAATTATGCATTTTTCCAGTTTTTGGAATTTTGCA
GTTTCAATCCCTTATAGGCACCTAATAAAC	GTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGA
GTTTCAATCCCTTATAGGCACCTAATAAAC	TTCCGGAAGCAAGCGAGGAACTTATTGACGGATTAA
GTTTCAATCCCTTATAGGCACCTAATAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017161.1|WP_012963884.1|1130602_1132345_-|TIGR02556-family-CRISPR-associated-protein	cas8b1	pfam09484_cas8b1_CAS-I-B	gnl|CDD|378190
NC_017161.1|WP_012963886.1|1133118_1134792_+|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl|CDD|235393
NC_017161.1|WP_012963875.1|1121190_1121391_+|DUF542-domain-containg-protein	unknown	unknown	gnl|CDD|377347
NC_017161.1|WP_012963887.1|1134796_1136506_-|proline--tRNA-ligase	unknown	unknown	gnl|CDD|236405
NC_017161.1|WP_012963874.1|1120872_1121175_+|cupin-domain-containing-protein	unknown	unknown	gnl|CDD|224829
NC_017161.1|WP_012963870.1|1118030_1118396_-|hypothetical-protein	unknown	unknown	unknown
NC_017161.1|WP_012963880.1|1126191_1126698_-|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863
NC_017161.1|WP_012963881.1|1126687_1128994_-|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|350688
NC_017161.1|WP_012963883.1|1129716_1130619_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl|CDD|274217
NC_017161.1|WP_012963872.1|1119302_1120412_+|aminofutalosine-synthase-MqnE	unknown	unknown	gnl|CDD|213851
NC_017161.1|WP_012963878.1|1124938_1125205_-|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl|CDD|187856
NC_017161.1|WP_012963873.1|1120469_1120868_+|hypothetical-protein	unknown	unknown	gnl|CDD|376293
NC_017161.1|WP_012963882.1|1128948_1129710_-|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl|CDD|131641
NC_017161.1|WP_012963879.1|1125205_1126195_-|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|187853
NC_017161.1|WP_012963871.1|1118434_1119340_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl|CDD|260116
NC_017161.1|WP_012963868.1|1116356_1117772_-|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl|CDD|366703
NC_017161.1|WP_012963885.1|1132328_1133066_-|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl|CDD|273848
NC_017161.1|WP_012963869.1|1117740_1118013_-|acylphosphatase	unknown	unknown	gnl|CDD|224174
NC_017161.1|WP_012963876.1|1121404_1121824_-|DsrE/DsrF/DrsH-like-family-protein	unknown	unknown	gnl|CDD|225120
NC_017161.1|WP_012963877.1|1121884_1122460_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_017161.1|WP_012963884.1|1130602_1132345_-|TIGR02556-family-CRISPR-associated-protein	cas8b1	pfam09484_cas8b1_CAS-I-B	1.3e-102	339.1	24.9
NC_017161.1|WP_012963882.1|1128948_1129710_-|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	2.9e-45	149.4	0.0
NC_017161.1|WP_012963879.1|1125205_1126195_-|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	6e-139	457.4	7.6
NC_017161.1|WP_012963885.1|1132328_1133066_-|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	5.1e-42	139.1	4.2
NC_017161.1|WP_012963880.1|1126191_1126698_-|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	5.1e-51	167.7	1.3
NC_017161.1|WP_012963878.1|1124938_1125205_-|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	9.9e-31	100.7	0.7
NC_017161.1|WP_012963883.1|1129716_1130619_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	8.1e-91	299.0	5.1
NC_017161.1|WP_012963881.1|1126687_1128994_-|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	2.1e-55	183.0	23.8

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017161.1|WP_012963884.1|1130602_1132345_-|TIGR02556-family-CRISPR-associated-protein	gnl|CDD|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	1.00374e-125
NC_017161.1|WP_012963886.1|1133118_1134792_+|carbamoyl-phosphate-synthase-large-subunit	gnl|CDD|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NC_017161.1|WP_012963875.1|1121190_1121391_+|DUF542-domain-containg-protein	gnl|CDD|377347	pfam04405, ScdA_N, Domain of Unknown function (DUF542). This domain is always found in conjunction with the HHE domain (pfam03794) at the N-terminus.	3.00412e-14
NC_017161.1|WP_012963887.1|1134796_1136506_-|proline--tRNA-ligase	gnl|CDD|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NC_017161.1|WP_012963874.1|1120872_1121175_+|cupin-domain-containing-protein	gnl|CDD|224829	COG1917, COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown].	3.41536e-11
NC_017161.1|WP_012963881.1|1126687_1128994_-|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	7.9632e-47
NC_017161.1|WP_012963880.1|1126191_1126698_-|CRISPR-associated-protein-Cas4	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.64034e-61
NC_017161.1|WP_012963883.1|1129716_1130619_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl|CDD|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	1.61642e-87
NC_017161.1|WP_012963872.1|1119302_1120412_+|aminofutalosine-synthase-MqnE	gnl|CDD|213851	TIGR03700, mena_SCO4494, putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family. Members of this protein family appear to be involved in menaquinone biosynthesis by an alternate pathway via futalosine, based on close phylogenetic correlation with known markers of the futalosine pathway, gene clustering in many organisms, and paralogy with the SCO4550 protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	1.57542e-177
NC_017161.1|WP_012963878.1|1124938_1125205_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.87119e-30
NC_017161.1|WP_012963873.1|1120469_1120868_+|hypothetical-protein	gnl|CDD|376293	pfam00115, COX1, Cytochrome C and Quinol oxidase polypeptide I.	0.00504412
NC_017161.1|WP_012963882.1|1128948_1129710_-|type-I-B-CRISPR-associated-protein-Cas5	gnl|CDD|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	2.09563e-43
NC_017161.1|WP_012963879.1|1125205_1126195_-|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.6802e-171
NC_017161.1|WP_012963871.1|1118434_1119340_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl|CDD|260116	cd13944, lytB_ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. The 4-hydroxy-3-methylbut-2-enyl diphosphate (HMBPP) reductase (called lytB or ispH) is the terminal enzyme of the mevalonate-independent 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway, one of the two metabolic routes for isoprenoid biosynthesis. The MEP pathway is essential in many eubacteria, plants, and the malaria parasite. LytB converts HMBPP into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP).	2.11018e-143
NC_017161.1|WP_012963868.1|1116356_1117772_-|LysM-peptidoglycan-binding-domain-containing-protein	gnl|CDD|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	2.37184e-29
NC_017161.1|WP_012963885.1|1132328_1133066_-|CRISPR-associated-endoribonuclease-Cas6	gnl|CDD|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.93579e-32
NC_017161.1|WP_012963869.1|1117740_1118013_-|acylphosphatase	gnl|CDD|224174	COG1254, AcyP, Acylphosphatases [Energy production and conversion].	1.60189e-27
NC_017161.1|WP_012963876.1|1121404_1121824_-|DsrE/DsrF/DrsH-like-family-protein	gnl|CDD|225120	COG2210, COG2210, Peroxiredoxin family protein [General function prediction only].	1.0381e-16
NC_017161.1|WP_012963877.1|1121884_1122460_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.83414e-20

Protein sequences

>NC_017161.1|WP_012963877.1|1121884_1122460_-|TetR/AcrR-family-transcriptional-regulator
MSKKQLGEYTRRSIILTAKRLFVEKGYFNTSMRDIAKEAGVSTGALYHHFKSKEEIASEIYRETVEKIKERLETALRKGKGTKEKITGIIRELLILAEEDRYTMEYALYVKHREILDVPVCSTEPMELLKKFCRKEINKGRIRDIDPELCAVCITAAPVRLMQLKWDGVIKDPLTSYAGSLGECVWRSLSP
>NC_017161.1|WP_012963876.1|1121404_1121824_-|DsrE/DsrF/DrsH-like-family-protein
MKTMAMVVRQDAYDLVLTPLAFAYLGVAYYDEINILFVNWAVRLLSKQGVEAIKPSADHAGTPVEMIEERVKAAGLPADLHEIFKKLKETGKVHLYACSLAAQIFGVEERDLIPEADGIVGATWFLTEKAEPATIFMQY
>NC_017161.1|WP_012963875.1|1121190_1121391_+|DUF542-domain-containg-protein
MIDKSMTVNELLRSYPQVQALLEKYYIDYCCGGHRTLEEVAKEHGFDLNEFLEEVRILITKLNKGA
>NC_017161.1|WP_012963874.1|1120872_1121175_+|cupin-domain-containing-protein
MKVNLLKVPFDESRTRHTLAYDSKEARLVVFSMPPGSEVPPHTSPSRVLLYCAKGSGEFLKGKDWIAVEEGDVVACEPLEPHGMKASTPMIVVATIAPAP
>NC_017161.1|WP_012963873.1|1120469_1120868_+|hypothetical-protein
MNSLTKVNLLLSFLYLLLGSLLGLMLGYKQTASSLFSMGGSPTLAHAHLQLVGFVTQMIVGVTYHIVPMLSRGKINSFKLGYLHTALLNAGLLIQVWGFLTDRILFKSFGSLLLFASIVMYLFNILKSMKWR
>NC_017161.1|WP_012963872.1|1119302_1120412_+|aminofutalosine-synthase-MqnE
MNIVGLVEKVQDKNLRRIGEKVLKGERLSPEDAIYLFYSSELAYIGALSEYINRKKNGMFAYFIVNRQINPTNVCIYQCSFCAFGVTKSDPRAYEMSLEDILKKVGETYAQGGREVHIVGGIPHHWKAEDYVRLVREVKRAFPEITVKAWTAIEIHHMSKISGRSYEDILKELKDAGVEVLPGGGAEIFSERVRSIIAPYKANAQEYLEVHRTAHKLGIPTNATMLYGHVETYEERVEHMLKLRELQDETGGFQVFIPLAYWPEGTKLGGKRTSSVDDLKTIAISRLFLDNFEHIKAYWVTLGEKVAQIALNFGADDIDGTIEEEKIVHSAGTKSAYGHSRERLIKLIKDAQKIPVERDTFYRPVSIHS
>NC_017161.1|WP_012963871.1|1118434_1119340_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MVEIVVAEHAGFCFGVKRAISIAEQSSELSKQGKRVFTMGPLIHNPQEVERLRKKGVELLYTEDALKSGDTVIIRSHGIPPKKERQLKELGLNVMDATCPYVKAVHDAVVKLSQEGYFVVLVGEKSHPEVIGTLGYLEESGGKGTVVESFDDLKAVLGKDKVGIVAQTTQNEQFFKEVVGEIAIWAKEVKVINTICNATSERQEDVYKLAPEVDVMIIIGGKNSGNTRRLYEISRSLNLNSYHIETADDIKPEWFIGVKRVGITAGASTPDWIINSVVERIREVSKEEQNEYSRTCREGAG
>NC_017161.1|WP_012963870.1|1118030_1118396_-|hypothetical-protein
MCKRLMSFIIALGLFSCTGKGTYKEATNSWCPKGVSFSGITSITVEGIVDYEELNWCKVVITSGDMRSEIYFTQDGSRQRWVQYKGGTIRSETQIRKTKAIMRIYDERGNLIEEVRSKEAF
>NC_017161.1|WP_012963869.1|1117740_1118013_-|acylphosphatase
MVAYRVFLSGIVQGVGFRAYTKTLAESYGLDGWVRNMPDGRVEVFVQGDKDTVWDFFKKLSEGPPLSKVELMEIRKEVIRDEERGFSVRY
>NC_017161.1|WP_012963868.1|1116356_1117772_-|LysM-peptidoglycan-binding-domain-containing-protein
MKREVLALGISVLLGFAYAKECEYYKIQKGDTLTGIAKKKGVSVEDILSHNKHLDPNRVKVGEKICIPTGYVKSVRAKTKEYDYYVVERGGRLEHVAKRLGLPVKELEELNPKYKGAWLEKGTKVKVPKGVLKAEQTKEATTRAKQDYDYYVMQKGGKLEHVAKRLGVPLKELEALNPEYKGKFLSKGTKVKVPKGEEKEEKKVAEESYDFYTVERGAKLEHISKKLGISLKTLEKLNPEYKGVWLKKGTRVKIPKGTAKSEEIPGGKTKVSYVKHRVRRGETISSIAEKYGVSTKEVMRVNHLKSKKLHVGMVLKIPVSAVAKEEKTPKLGEKNTASIPEERQAPPTEIKVSKGSIPMPVDGKVVKSTRGVDIITNCGEAVRSVDDGKVIYSGDDLQAYGNMVIIEHGDFISLYAYNSKNMVKRGETVSKGQQIATAGTKNNSGECMLHFELRTKDGVPLDPTEYLRNAQ
>NC_017161.1|WP_012963878.1|1124938_1125205_-|CRISPR-associated-endonuclease-Cas2
MFVILVYDVKEERVAKALKICRKYLTWVQNSVFEGEITEAKLRMLKDELKGIMDETYDSVIIYKFRTKQYYERETLGIEKPSHEDFIV
>NC_017161.1|WP_012963879.1|1125205_1126195_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKPLYIFSSGRLERRENTLSLETQEGRKVIPINSVSEIKVFGELDINKRALEFLTRNQIPVHFFNHYGYYIGSFYPREALNSGFIILKQAEHYLDREKRMYLAKGFVAGAVNNILKNLEYYRRKGKDLKETISSIEEKFKAVSSVDSIAELMQVEGEIRKTYYESFNLIIQVEGFYFDKRTKRPPENPINALISFGNSLLYTTVLSEIYRTHLDPRIGYLHETNQRSFSLNLDISEVFKPVIVDRVIFSLLNKGQMQLKHFDSDVGFSYLNDKGRSIFVKEFEDKLNTTIKHRNLGNVSYRRLMRIECYKLYKHFMDEEIYKPFVGEW
>NC_017161.1|WP_012963880.1|1126191_1126698_-|CRISPR-associated-protein-Cas4
MRYEDRISIGGTLVWYYYICKREVWLIGHGIEAEQENDYILLGRYIQEIFYTRKRKEIMIDNTIKIDILPGRKVIGEIKKSSKFLESAKMQVVFYLYYMKREKGIDMEGVLLIPEERKRIKVSLTPELEREIEEVIEDIGRILKLEKPPKAVKIPYCKKCAYRSMCWA
>NC_017161.1|WP_012963881.1|1126687_1128994_-|CRISPR-associated-helicase/endonuclease-Cas3
METKSGIYSHPGIFIEDHINRCLELLSFYLQRELPLISDEFVLSATLSVALHDFGKCTKYFQDYITGKGRRSEFSKHSLLSAVYTYYCAKKLISDPKLLSFSFVACKSHHTDPESFTSEFTFDKDEIERLKIQIESIDQEKTNIFISNLNLPENVKKSLFLNKEEFKNKLTEIEKEIKSFRKSFHKCESKIEDFVKFQYLFSLLLDSDKTETGAKSFRPKRVSCIPLHVVSRYKANNLPKSREIDHLREEAYKEILSKEVDLSKRIYSITLPTGMGKTLTGFAFALKLRELIKNEKGTTPRIIYSLPFVSIIDQNAEVLIKVLKTEFHEIEGRILIKHHHLSEPRFEEYEFSEARLLTEGWNSEIVITTFVQLFHTLISARNSEFRRFNKLANSILLIDEVQALPTKYWHLIREVLREVSKNLDVYIILMTATQPYLLEEAVELADPHVFRKRLDRIRVFINLEGVSLGQFVNSLEFKKDKTYLFITNTISSSKELYRLLKERMNEKICYLSTSVLPYERLRRIEEIKKGKYRFVVSTQLVEAGVDIDFDEVYRDFAPFDSLNQSAGRCNRNMERGKGNFYVIKLTDSEGKPFYSRIYDSVLCNITEEMLKGVKELSEPELTNLIEEYFCKVWEKTTPDKSKKILEAVKCFSFSSGDISIRNFELMEDDRYKKDVFVEINDEASEVWSRAKSIIEDLKKKKIDIFKAKEEFEKLKPDFYKFVVTVNIKENEPSYDQELKTFFVSQDMLERYYNSETGFIEKGEAFFEV
>NC_017161.1|WP_012963882.1|1128948_1129710_-|type-I-B-CRISPR-associated-protein-Cas5
MKVLVFDLFGDLGHFRKFYTTSSPLTFPFPPQPTIRGIIGAIMGFGKEEYLDKTKDIYVGVKIVNPIKKLRTGLNLIFTKGSSGEFDPTLDPSRKGDANKTLRTQVKFEFVKDPRYRIYISASEEFLKKLTDMVKNHKTYYTVSLGLSELLADFSFVGVFDSHPIDVSDRADSVIPSRIIREIDIGKVQKIGKERIPVVMDSNRMVKMYEDVVFSVEGGAIYGKFTDLIKLGNGEVIYLWKQSQESTPIQESL
>NC_017161.1|WP_012963883.1|1129716_1130619_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MKSRREFLFIYDVSWANPNGDTMDENKPRIDEETGINYVTDVRLKRTVRDQLAEMGHEVFIKEERTDDGNLKTKESIFAKYGNDYNQVLEKCIDIRLFGGTFAIKNQQRCFTGPVQFKFGKSLHRVKMEFVKGTTVMPSAEQKAQGTMTEMYVVPYSLIVFYGIANENAAKETKLKDEDIDIMLKALWVGHKSSTDVISRSKFGHEPRLLIEIIYKEGTLTHMGELDKLVRINTDKRDEEIRDIEEVEIDLSRLKEKVQKYKDKIEKVNYIINDRIRIEPSLKEVFSGIAIEEFKWAKEV
>NC_017161.1|WP_012963884.1|1130602_1132345_-|TIGR02556-family-CRISPR-associated-protein
MLKAIRDIGRDIGELFGGVKLYDEVEKADRVLVLEFDEKGEFVKTDLEDFFEGKQEKYLYKKAKGSNPPTLTPTIILQRGKKKPDDKKSPVMRTLDNLEKVLNKIQFEKIARPTLDKKKLEEEIYRITEIIPAKEKILLTIKIGGKYVGEIEDFIKALKKELEEEGRESRGTGICSVCLQEKEVSGDIAPFKFYTIDKPGYITGGFKKEIAFKNFPLCYECRDYIKRGREEILEKKLKFKIGGVITYYLIPEFILGRDKIKKETFDILFPRNPEVRKIMLSSREHKSLMADEEEILEILSDERDVLTLNFLFLESELSAERILLLIQDVYPSRLRELFEAKRKVEKLFSSNGFSYTFNYYTIYKFFSKSDSTKKEPDLRKYFLEVLDKTFRGVKIDEKFLLNFLMKGIRDAIKKEEGYKNLIKDAFSVFVFVKLTTKEVDMEVKDVNSLEEFLESLPTLNNDLKKGLFLLGALTERLLRVQESERGSKPFLKKLKGLKMNENDLKGLLPEVRNKLEEYDKFRAGEMKLFNLTSEYFSKAPAVWNMSIEELNFYFSLGMGMFDKAAGYIYSKKEVSNEEQA
>NC_017161.1|WP_012963885.1|1132328_1133066_-|CRISPR-associated-endoribonuclease-Cas6
MILKIKLTGEGLIRLPKSYNHLLQAFFYKNTDPVLSKFLHEIGFVYNRRRFKLFTFSKIIGKLASRQGNLVFFEPQITVYFASPLMDIVSSAVNVFLKRENLFLGENRLRLESVELIKPTVREDVNVRCLSPITVYRTPEGETKKQFFSPWQEEFYELIKNNLIKKYQLIYGKSYKEELELKPLRISQRYKKKIVYKGSLIEAWEGYYNIRGSTQIVKLALEAGLGAKNPQGFGMVEVVDSVEGD
>NC_017161.1|WP_012963886.1|1133118_1134792_+|carbamoyl-phosphate-synthase-large-subunit
MPKRSDIKKILIIGSGPIVIGQAAEFDYSGTQACRALKEEGYSVVLVNSNPATIMTDPSVADRTYIEPLTVEVLEEIIKAERPDALLPTLGGQTALNLAVKLYEEGILERYGVELIGASYQAIKKGEDRELFRESMKKIGLKVPESAVVSSLEEGMSVIKSIGFPTILRPAFTLGGTGGAIAYNIEEFKEKLEVALKTSPIHQVLMDKSLIGWKEFEFEVIRDSKDNVIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRDACIEVMREVGVDTGGSNIQFAVNPENGDFYVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITKHTPASFEPSIDYVVVKIPRFDFAKFPQTDRTLTTMMKSVGEVMAIGRTFKEAFLKAIRSLEIDTYGLLHPSFDHVSDDVLVRNLRIPNPERIWYIASAFRRGYSVDEVYHYTKVDRWFLYQIKQIVDFESTLAQGVLDEEKLRQAKELGYSDFEIAKLVGKREEEVRALRESLRVLPAFKGVDTCAGEFVAYTPYYYSTYEKPYYTMDGQEILDQD
>NC_017161.1|WP_012963887.1|1134796_1136506_-|proline--tRNA-ligase
MRWSTYFWYTSKEEPADAEAPSHKYLLKGGFIKQVASGIYAFTPAGYRVLKKIENIVRKEMDRSGAQELLLTVLNPAELWRETGRWDLYGRELFTLKDRHGRDYCLGPTHEEEITDMVRTFVNSYRQLPFILYQIQVKFRDEKRPRFGLIRGREFIMKDAYSFDTDEFSALMSYETMKFAYERIFKKLRLKTLMVEASVGAIGGMSSHEFVILTDYGEARVAYCESCGYSANAEIVKLNKGKEEEEEERQLTRVHTPNTRTIEELSSFLKVPPRKILKSVLYIVNGEPLLVVIRGDREIDENKLEALLNTENFRLATDEEVYALFKTQRGYIGPFNIPKDVRVIWDNSVYGIKNAVVAFNEPDYHYINANPGRDFSYGEFFDVAQVVEKDPCPKCGAPLKVSKGLELGHIFLLGTRYSLPMKAFYKDQQGEDKPIYMGCYGIGISRCMSAIVEQYSDELGIKWPTVVAPFELNVICLNPSDAEQKTVAEKIYYQAQEMGLDVIYDDREASAGFKFADADLCGFPYRIVVGKKTKEGKVELQKRHTGEKLDVPIEDAVRIVKEFVDKDKE

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_017161_1	1.25|1124176|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR	1124176-1124212	37	NC_017161.1	568034-568070	0	1.0

1. spacer 1.25|1124176|37|NC_017161|CRISPRCasFinder,CRT,PILER-CR matches to position: 568034-568070, mismatch: 0, identity: 1.0

cataggcattgacgaaggggatatctactttaccgcc	CRISPR spacer
cataggcattgacgaaggggatatctactttaccgcc	Protospacer
*************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	773709 : 784863	8	Bacillus_phage(16.67%)	tRNA	NA
DBSCAN-SWA_2	1150594 : 1160021	9	uncultured_Caudovirales_phage(33.33%)	NA	NA
DBSCAN-SWA_3	1452831 : 1459020	8	Bacillus_virus(28.57%)	tRNA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_017161|773709:784863|DBSCAN-SWA
AGTGCTTCTTTACCAATTTCTGCTTAAAAGAGGACTGGAGAGTAGGAAGAGTCAGGAGGAGTTTTTTAAACTGATGCTTTCCGCAATGGAGGAAGGGGGAGTTAAAATCATCCAGGCACCTACCGGCACAGGCAAGACTTACGGCTACCTTATACCCATAGTAGAAAAAGGTCAGAAGGCAATAATTTCAACAGGTACAAAGCTTTTACAAGAACAGCTAAGAAGAGACTTGGAAGTCATCAAAAGCTATGCCGGCTACATACTGGGCAACCATGTCAGCTATGTGGTGCTTAAGGGAAAGTCCAACTATTTATGTCTGGACAGGTATTACGCAGAGGCACAAAAAGTGCCTGAGCTGGAGATGGCTATAAACTCCGGCTGGGATGGAGACTTTGAGTTTGTGAACCTTGATGTAGACCTCAGGGAAAAGCTGTGCGTAGATGACGACTACTGCACCCCTTACTACAGAAATATGTGCAAATACCGATATGAATGCTACTACTGGAGCAAGCTAAAGAATCTGGAAAAATCTGCACAAATACTTATAATTAACCATGCCCTTTTGAGTCTGAGGGAGTTTGAAAATCCAGAGGAGAGACTCTTGGTTATAGACGAAGCTCACGAGCTTGACAAATACATTACAAGCAGTCTTAAAACAGGCTTTTCCACTTACACTCTGCGGATAGACATTCTTGGAAGAATACGGGAGTTTTTGCCTTCCGCCCATGTGGACATAGAGAGCTTTTTTACAGACAACTTTGAACACCTCTTTAAGGAAGGAAAGGAGGAAGTAGCTCTTGAGAACCTATGTCCATACGCAGAAGATTTTGAAAAGCGAATCATGACAGCACTTTTTTCCCTCTACCAGAGAGTAAAAGAAGAAGTTATGCACAGCATCCACAGCTTTTTAAAGGAAAGGCTATTTGTAAGTCTAAAGCTCAAAGACTACCTTTTAAATAGCGGGGTGCTTGCTTGGGAGGACTATCTGAAGATAAATTCCAACTACGAAGAGTTAAGCCAAGAAGAAGAGAAGCTTTTAAAGAAGCTCAAAACATACCAACTTCTTACCAAAAGGCTCACAAGGCTTAAAGAGTTTTTCCAGCTTATGAAGGAAGAAAAGCCCGAGATGGGATACATGGTTAGCAGAAGCTGGAGCAGGAAGCTACAAACTTACAATTACAGGCTTGAGTGCTTTCCAGTCTTTCCATCAGGCTTTATAGACTTTAGCGGTTATAAGGCAGTGGTGATAACATCAGCTACTGCCAACCCAATAGACCTTGAGAAAACTCTCGGAATTGTGGGGGATTACTACGAGCTGGAACACACCTTGCCGTATCATCAGATTGACTTTGTTGTTTACCTTGTGGATCCAAGAGAAGAAGACTGGAAGGATTGTCTTATGAGAGCTTACAAGTATCTTAGAACCTTGTACGATAAGGTCCTAATACTTTTAACCAACAGGGAGCACATGAAGCTCTTTGAGAAAGAGGAGGGATTAGCCTTTCAGGGGGAAGATAGTCTTTCTAAACTGGTGGAGCATCTCAGAGAGGGAAGAATAAAGGCTCTTGCCGGGCTTGACAGCCTTTGGTTTGGAATAGATGTAAAGGGTGAAAAGGGGCTTTTGATGGCAAAGCTACCCTTTGAAAGTCCGGAGGACCCCATAACCTTCCACAGGATAAGGTTTTTAAAGTCTGTTGGGGAGGACCCCTTTGAATACCAGAAGAGGAAAGCCCTCATCAAGTTTCAGCAGGGTATAGGCAGACTTATAAGGAGCAAAGAAGACAGAGGAACCATAGTGTTATGTGATAAAAGGATATTCAAGTTTAAGGAATTTCTTAGAGTAGTAGAAAAGCTGGGGATAAAGGTAAGGGTGGTTAAGATGCTAAAATAAATACATTGGCATGGACATTATAGAGTTGAAAGGAGTCTCAAAGGTTTACAGAGTATACAAAAAACCTGCGGACAGGCTGAAGGAAATTCTGTTAAGAAGAAGCTTTAGCTACGAAAAGGTAGCCCTTAAGGATATAAATCTAAAAGTTAGAAAGGGTGAGGCGCTGGGGATAGTAGGAGAAAACGGCGCAGGGAAAAGCACGCTGCTCTCCATAATATCCGGCGTATTAGAGCCTACTTCAGGAGAGGTAAAGGTGCTGGGAAGGGTGGCTGCTATACTGGAACTGGGTGCAGGTTTTCATCCCGAATTTACCGGTATAGAGAATGCATACATGTATGCTTCTTTAAATGGTCTTTCCAAAGGCGAGATAGACAAAAGACTTGACTTTATAGCCGAGTTTTCCGAGCTGGGTGACCTTCTGCACCAACCCATAAAAACATACTCTACTGGTATGGTGGTAAGGCTTGCCTTTTCCGTGATGATAGCTTTAAATCCCCAAGTCTTTATAATAGACGAGGCTCTATCCGTAGGTGATATACACTTTCAAAAGAAATCCTTTGACAAGATAAAAGAGTTCAAAGAAAGCGGAGGGACGCTTATTTTCACCACCCACTCCACCTATCAGATAACCAATGTATGCGACAGGGCAATATGGATAAAGGATGGCAGGATACAGATGGAGGGCGACCCCTTCTCGGTAGTTAAAGAGTATGAAGATTACATGAGAGAAAAGGATAAGATAGAGCAGGAACACTTGCAGGTGCAGAGGGCTAACATAACTCACGCCTACATAGAGGATTTTAGGCTCTCTCATCAGGAGATAAGACCCGGAGAGACCCTCAAGGCTTGGATAAGAATAAGGTCCAAGAGAAGGGAAAAGGTTGTCCTTGCCATACTTTTTAGGAGAAACGACAATGAGCTAATAAGTGTCTATTCTACCAAGCATGAGGGCGTTGAGATAGTTGTAAACGAGAGTGTAAATGCTGTATTTTCCTTTCCAGAATTCCCGCTACTGCATGGAAAGTACTTTGCAGATGCCTACCTTCTTGATGAGGCTGGGGCAGTGATTTACGATGTTAAAAGCTTACCCTTTGATGTGCCAAAAGAGTCCGTCGTTGACCTGGGCATATTCAGGATAAAGGCAAGTCTTGAGTTAAATCCTATCGGCTATAGCTTTAGCAAACTCTAAGGTGGTAAGCTCTTTAGCTTCCAATCCCTGCTTTCTAAAGCCGTTAGCTATGTCCGGCGTTCCAAGCCTTTCAGCTATGGTCCTTTTGACTGCGGAGTATATAAGCTCGGAGGCTTCTTTCCAACCCAAGTATTCAAGCATCATAGCACCGGACAGCGTCAGCGATAGAGGATTGGCAATACCTTTGCCTGCTATGTCGTAGGCGGTTCCGTGAGTGCTTTCAAACAGGGCATATCCGTCACCTATGTTTCCGCTGGGCACAAACCCTGGACCACCCACCAATGCGGAGGCAAGGTCAGATATGTAATCTCCATTCAGGTTTTGAGTTATTATCACATGGTAAGCCTCCGGCTTTAACACCAGCTGCATGAGCATCTGATCGGTGATAACTTTAACCATCAAAACCTGACCATCTTTTGGCTCTCCCTCCGTTATCACTTTTCCTTCAAACTCAGGCTCTTTTGCCACCTCAAAAGCCCAGTTCATAAAGGCACCTTCCGTAGCTTTCATTATGTTGCCTTTGCCTACAACAGCTACCACCTTTTTGTTATTCTGCAAAGCCCAACGGAGAGCTTTTCTTACATGCCTTTTTGTCTTAAACTCACTCATAGGCTTTACCGTGATGCCACAATCCTCGGGAAGGGCATATTCGGACACTCCCATCTCTTCAATAAAGAACTTCCTAACCTTCTGCGTCCTTTCCTCCTTAGGCATGTACTCTATGGACATATAAACATCGTCAGAATTTTCTCTAAAGACAGCCACATTGACCCTCTCGGGGTTAGGTATGGGTGCAGGCTGACCCAGCCAATAGACAGGTCTTATGGCTGAATAGAAGTCCATAGACTGGCGCAAGATAGCATTGAGAGATTTACCTCCCTTACCTACGGGTGTGCCAAGAGGTCCCTTTATGCCAACAACCGCTTCCTTTAAAAACTCTATAGTCTCTTCTGGCATACGCTTGCCTGTCTTTTCTTCAGCCTTGTCCCCGGCCAGAAGCTCTACCCAAAAGATGTTTCTTGAACCTCCGTAAGCCTTCTCTACGGCAGTATTTACTATGTGTATCATGGCAGGCATAATCTCGGCACCTATTCCATCCCCCTCTATGAAAGGTATGATGGGAAAGTTAGGCACTTCTATACTTTTGTCCTCCTTGAGTTTTATAAACTTTCCTTCTTGTGGCACCTTCAGGCTACCTTCCCACCTATAAACACTTTCCACCTTTAACATCGCTTTCACCTCTCCGTCAGTTATGATTTCAATATTTTAACACCTCAGCTATGAAAAAACTGGGTTTTAAGTTCCAAGTTTTTCCATCCACCCTGCAGGAAGTAATACTCCCTGCTTACTATCCCCTATCCACTATGTTCAATGCTCCCAAAAGGTCTGCATGAAAAACCTTGTTCAATACATTGTCCTTTATCTCAAGTTCTCTCAGCTCTTTTATCTAATTCTTTAAGCAATCCATCCAAGACCTCAGTTTAGCCCTTTCTTTGTTAAACCACAAAATTATTGACTATAAACTGTCTTTTCATAATCGGGTAGTTATTGAGAACACCCTTGGAGAATAGAATCTGGAAAAGATGGTTGGACCCTGTTAGGAATGAGACGGCGGAAGAAACAAGATAAAGCTCCCACATACGAAAGAATTCCTCACCGTGCTTCTGTACAACATCTCGGGTATGCTGATAAAATCTTTTTCTCCACTCTCTAAGTGTTCTATAGTAGTGAAGCCTCCAGTCATCTATATCTATGAGGTTAAAACCCAAACCTTTTGATGCTTCAAGTATCTCTGTAAGTGCAGGTATATACCCACCCGGGAATATATACTTTCTGATCCACCTGCTCTGGCTCTCTGGCAGAACCTTCCCTATAGTATGAAGAAGAAAGAGCCCCCCCTCATGAATAACTTTCTCCACCACTCTAAAGAACTTTCTGTGCCTTCCCTTTCCCACATGTTCAAACATACCAACAGAGACCACTTTGTTAAACTTCTTGTCAAGCTTTGGCAGGTCCTCGTAATGCATAAGGTAAACCCGCACCCTATCTTTTAAACCCTCGCTTTCTATGCGAGATTTTACATACTCGTACTGATTTTTTGAAAGTGTTATACCTGTAGCTTCTATATTGTAGAGCTTTGGTGCCTCAAGTATTATGGATCCCCATCCACAACCTATGTCCAAGAGGCTATCTCCATCGGTAAGCTGGAGTTTCTCGTAAATTATGCTTCTTTTCTCTGCCTGAGCTTCCTCCAGGCTTTGGTCTTTATTGGAAAAGAAGGCGCACGAGTAAGTCATAGAACTATCCAGCCATAGCTGATAGAAATCGTTACCAAGGTCGTAATGCCTTCTCACCTCTTTTCCCTCAAGGAACTTCAAAAGTCCAAGGTACTTAAGAAGCATCCTCCCCCAGCTATTTCTGAAACTTTTATCCTCATCTTTCTCCCTCAGATAACAAGTGCATGCTACCAAAAAACTTTCAAGATCTCCGTCTACCTCTATGCCTCCCTTAATGTAAGCCTCGCCAAAGCCCATCTCCGGGTCCTTCAACACCTTTTTAATTACATCTTTGTCTTTTATCCTCACTTTGCACTTGCCAGCGCCCAAAACTTTCCCATCGGGAAGCTCAACGCACAAACCCCCATCCAATCTTTTGCTTACTTCTTCCACGATGGATGCTATCATGACTCAACCCTCCTAATTCCATAATTTATGCCCTTGAAGAAGTTATTCTCTTTTTATATAATAAATCAATATTCAATCTCAATTTTGGAGTGTAATGATGAGTAGGATGCTTCTGTGCCTTTTCTTAATTTCGGTATCCTTTGCCTTTTTCCCTTTCACCGGTGAGGATGCAGATACTCTGGGTAAAGGTGGTCTTCAGTGGGAAACTCAGTACGCACGTTTCAAGCACTACGATGAAACAGTGCATAAGGATGTAGTTCTGCAGATTACCGGCGGAATTAAGGACAACACGGATATAGCCTTGATAATTCCTTACTCATTTTACAGGTACAAGGACGGAACGAGAAATGACGGATTTAGCGATGTGGGCGTTTTTATCAAGCACATACCCGTTGAAGCTGGAAACTTTAAAGCAGGTTATAAATTGCAACTGAATTTTAATACAGGTAAAGAGGGAATAGGCTACGGGAAGATAACTGGCAATGTAAACCTCATAGCCCAGGTGTGCAAAGACAGTATGTGCTACAATACTAACTTCGTTTACATAAAGGCAAGCTTTGTAGAGGAGCTGAGGGACACTTACGGCATCATCTTAAGCAATTACAAGAAGTTAGGTAAAAGCTTAACTTTAGGGGGAGAGGTAAAACTCCTCAGACCGGCGGAAGATGGTGTGAATAAATTGGATTCTCACATACTTTTAGGTAGTGTTTATTCCTTTGATAAGTTAAGCGTTGCATAGCACTTTTGCAAACTGGGGCATACTTGCAGGTTTCTTAATGACTTTCTGAGAGCAGTTTTCTCAGAGTTTGAAGATTTTTTCTGTCCCAGTCATCTACCTTTGGGGTTTCCAGATAGTAAGGGAGCTGTGAAAAGTAGGGATCTTTCAAAAAAAGCCTAAAGCCTTCAAGACCTATGTAGCCATGACCTATATGCTCATGCCTGTCTTTCTTTGCACCAAGCGGTACTTTTGAATCGTTGCAGTGAATAGCTTTCACTTTATCTAAACCTATGCTTCTGTCTATCTCACCCTTAAAAGCTTCAAAACCCTCCTTCGTATTTATGGCATAGCCATATGCAAAAGCGTGGCATGTATCTATACACACTCCCACTTTTAGCCCCTTAAAGGGCTCTATCAGTCTCTTTAGCTCCTGGGTGTTTTTACCAAGGTCTCCCCGCTCACCTGCGGTGTTTTCAAAAAGCACGCATGTGTAAGAAGGTATAAAGCTGGAAAAGATCTCCTCAAGGCCCTTTATTATGTTTCTCAATCCCTCTTCTTGGCTCACATCTTTGGCTGTGCCGGGATGGAAGTTGTAATACTCTATTTTTAAAAGCTCACATATTTTTAGCTCTTCAAGAAAAACCTCAATGGATTTGCTCCTCAGCTCCGGATGGGAACTTGCCAAGTTAATAAGGTAAGGAGCGTGAACCATTAGAGGTCCCCAGCTTCCTTTGAGTTTTATAAACTCCTCTATTTCCCACTGACTTATACTCTTTGCCTTCCAGGCTCTTGGGCTTCTCAAAAAGAACTGAAAAGCTTCCGCTCCTACTTCTCTGGCTCTCTCAAAGATTTTTAAAATAGGTCCTGCGGACGATACATGAATGCCTAAGCTGGGCATTGAACAGTTTGAGCGGAAGGCTCAGTAAGTTCTTCTTTTATTGCGAAAAGCACCATGTTTATAGCTTCGCTTGCTGAGCTTGCTCTTATCTTGCATCCAGATGCGTACTTGTGACCACCACCACCCAGCCTGCTAGCTACGCTGGCTACATTGACCCTCTCTTTAGACCTCAGAGATACTTTCCATACACCTTCGTCGGGTTTTTCTATGAGAGCAAAGGCTACCTCCACACCTTCTATGGATCTGGGGAAGTTAACAAGACCCTCACTGTCAGGATAAGTGGTGCCTGTTTCTTTGAAAAACCTGTCGTAGATGACTATCCCTGCCACCAGTCCATCCTCGTAAAGAGTTAAAGTGTCAAGAACCTTGGATATGAGCTTCATCTTTCCCAGAGACTCTCTTTCGCTGAACATAATGTAAGTCCTGTGAGGGTCCGCACCTTTCTCAACTAGCTCCTTAGCCATCTGGAAAGTTTCCGCTGAGGTGTTGGAATACTTAAAAAATCCCGTATCTGTGGCAAGTCCCGCATACAGACATTGCGCTATCTCTGTGTCTATAGCTGACTCGTCCCACAGTTTGAGAAGCTGGTAAATGATGGCTGTGGTGGAAGGGGCAGAAGGGTCTATGTAATCGTACATACCGTAAAACTCGCCACCTATGTGGTGGTCTATTCTCACTTTTCTGATAGCTCTCACCTCTGTACCTGCTCTGTAAAAACCGCTGGCGTCTACTACTATGCCCACATCAAAAACTTCGGTGGTTGGAAGCCTTATAATCTCCTCCCAATGAGGTAGAAAGTCAAGAAAGTGAGGCACCATGTCTTTACAGCCTACCTTTACATTTTTACCCTTCTTTTTAAGAAACAGATAAAGTGCAAGAGCGCTTCCAAGCGTATCAGCATCAGGATTCTCATGGGAAAATACAAGTATGGAACCCTTCTCCTCTTTAAGCAGGTCTATTAAAGGCACACTCTCGTGTCGCATACCAACCTCCAAAGGGATATAATTTATACCCTTTGACCTGTTTTAGCTATGGCGTTTGCACACCTTTGGCAGACTTCACCCACAAACTCCTCCTCTGGATAGTAAACCCAGCATCTTGGACACTTCCTCCCTTTCGCTCTGTCTACTCCTATGTGAAGACCTTTCAAGCTTTCTGCAGTTAGCCTGTACTTTCCACCTTCTTTCAGCTCCACCTGACTCACAGTAAAGTAGAACTTCAAATAGTCCTGGTACTTCTCCAAAAGGCTCACATCTCCCCAGAGAAAAACTCTGGCTTCGTAAGGATGGTTTATGTATTTATCTCTTCTTGCCTGTTCTATGGCTCTCATCACATCTTCCCTTATCCTGCCAAGGACTTCATAATCCTTTAGCAGTTCTCTATCTATAAGACTTTCCTGTGACTGTGGTATCTTGCTCATAAATACGCTCTCTGGAAGTCTGTTGTCTATGTTTCTGAGGTGTTCCCACACCTCCTCCGCGGTAAAGCTCAGAAAAGGCGCTATGCTGGTAGTCAAAGCAATGGCAAGCTCATAAAGGACTGTCTGTGCAGAGAGCCTCTCCCAAGAGTCAGGAGCGTATATATATAGCCTGTCTTTTAACACATCAAGGTAGAGGCTTGAGAGGTCCACGCTACAGAAGTTTCTGATAGTCTGGTAGACTCTGTGAAAGGCATACTCCCTGTAAAACCTGCCAATTTCTTCCAGAAGCATCTGAAGGTAGGACATCATCCACCTGTCAAAGTGGTGGAGTTGATGATAGGCAATGCTCCTTTGAGGGCTAAAGTCATAGAGATTAGCCAGAAGAAACCTGAGAGTGTTCCTTATCTTCTTATAGTCTTCTACTATCCTTTGAAGTATGGACTTTCCAAGCTTTACATCCTCTGTGTAATCCTCCGAAACCACCCAAAGCCTCAAGATGTCAGCGCCATACTGCTTTATAATTTCCTGAGGAGATATCACATTACCCAGAGACTTGGACATCTTCCTTCCCTGCTCGTCAACGGTAAAGCCATGAGTAAGCACCGCTCTGTAAGGGGCTTTTGAATAAGAGGCTACCGACTCAAGAAGTGAGGACTGAAACCAGCCTCTGTGCTGGTCCGAGCCTTCTAAATACATGTCAGCAGTGTCTATACCAAGTCTTCTCAAAACGCAGGCGTGAGAAGAGCCAGAATCAAACCACACATCCAGTATGTCCTCTTCCTTTTTAAAATCCTCAGAACCACAGTTGGGGCATTTATAACCCTCAGGCAAAAGCTCCTTCTCGCTAAGCTCAAACCATATGTCAGAGCCTTTTGGAGAGCTTTCTATGAGCTTGGCTACATGCTCAAACACCTCTTTATCCGCAACCACATTTCCGCAGCTTTTGCAGTAGAAGACGGTTATGGGAACCCCCCAGTATCTCTGCCTTGATATGCACCAGTCTGGCCTTGACTCCACCATAGACTTTATTCTGTTTTTTCCATAGGACGGTATCCATTTTACTTTTTCTATCTCTTCAAGGGAAAGCTCTCTTAAGGTTTTGCCGTTTAGCTTTCCCTCCATGCTTATAAACCACTGAGGTGTAGACCTGAATATGACGGGATTTTTACACCTCCAACAGTGGGGATAAGAGTGGGTGATCCTGCCCTCATAAATCAAAAACCCCCTCTTTTTAAGATCCTCTACTATGAGCCTGTTGGCATCAAACACTCTCACACTCCTTAAAAAGGGTGGCGCCTCTTGGGTAAACCTTCCTTCATCATCAACAGGAGAGTAAGGCTCAAGACCGTATCTTAGTCCCACTATGTAATCTTCTCTACCGTGCCCGGGTGCCATATGCACTATGCCAGTACCGGAGCTGAGTTCAACAAACTCCGAAGGATAAACTTTGCCTTCCTCTTCTGCATAAGGTCTTATGTAAGATAGGCCTATAAGCTCCTTACCCTTTACCTTCTTTGTAATGCTGCCCTTTAGCCCCGTGGTGTTTTGAAAGTTCTCTACAAGATCCTCCGCTATTATGTATGTTTCTTTGCCTACCTGGTAATATACATAAGTGTAGTCCTCCCCTACCATAAGCCCCATGTTGGCCGGCAATGTCCAAGGTGTTGTAGTCCACACAGCAAAGAAAGTATTCTCCTCACCCTTTAAAGGAAGCCTTACATATATGCTTGGGTCTTCCCTATCATAGTACTCTACTTCAGCTTCTGCTTCAGCAGTTTTGTCGTATATGCACCAGTAAACGGGCTTTTTACTTCTTATGATGAGACCTTTATGGAAAAGTTTGCCCAGCTCTCTGACCTCGCAGGCTTCGTAAGCAGGATCCATGGTGAGGTACGGATTTTCCCAATCGCCTAAAACTCCAAGTCTTTTAAACTCTTCTCTTTGAATGTTTACAAATCTCTTAGCATACTCCCTGCATAATTTTCTAAACTCCTGCTTGCTTATGTCTTCTTTTTTTATGTTTTTGGCTTGCAGCTCCTTCTCCACCTGCTGCTCAATGGGAAGCCCGTGGCAGTCCCACCCCGGAATATAATGCACTCTATAGCCAGACAGAAGCATGTACTTGTTTATCACATCCTTTAGTATCTTATTAAGGGCATGTCCTATGTGTATGTTGCCGTTGGCGTAGGGAGGTCCATCGTGAAGCACATAAAGAGGTCTATCTGAAGTAAGCTTCTGAAGTTTTTTGTACAAACCTTCCCACTTTTTGAGGATAAGAGGCTCCCTCTCGGGAAGGTGAGCTTTCATAGGAAAATCTGTTTTGGGTAAGTTAAGAGTGTCTTTGTAATCCTTCAT

Protein sequences of DBSCAN-SWA_1

>NC_017161|773709:784863|780245_781088_-|WP_012963480.1|DBSCAN-SWA
MPSLGIHVSSAGPILKIFERAREVGAEAFQFFLRSPRAWKAKSISQWEIEEFIKLKGSWGPLMVHAPYLINLASSHPELRSKSIEVFLEELKICELLKIEYYNFHPGTAKDVSQEEGLRNIIKGLEEIFSSFIPSYTCVLFENTAGERGDLGKNTQELKRLIEPFKGLKVGVCIDTCHAFAYGYAINTKEGFEAFKGEIDRSIGLDKVKAIHCNDSKVPLGAKKDRHEHIGHGYIGLEGFRLFLKDPYFSQLPYYLETPKVDDWDRKNLQTLRKLLSESH
>NC_017161|773709:784863|775609_776788_+|WP_012963476.1|DBSCAN-SWA
MDIIELKGVSKVYRVYKKPADRLKEILLRRSFSYEKVALKDINLKVRKGEALGIVGENGAGKSTLLSIISGVLEPTSGEVKVLGRVAAILELGAGFHPEFTGIENAYMYASLNGLSKGEIDKRLDFIAEFSELGDLLHQPIKTYSTGMVVRLAFSVMIALNPQVFIIDEALSVGDIHFQKKSFDKIKEFKESGGTLIFTTHSTYQITNVCDRAIWIKDGRIQMEGDPFSVVKEYEDYMREKDKIEQEHLQVQRANITHAYIEDFRLSHQEIRPGETLKAWIRIRSKRREKVVLAILFRRNDNELISVYSTKHEGVEIVVNESVNAVFSFPEFPLLHGKYFADAYLLDEAGAVIYDVKSLPFDVPKESVVDLGIFRIKASLELNPIGYSFSKL
>NC_017161|773709:784863|781075_782071_-|WP_014462594.1|DBSCAN-SWA
MRHESVPLIDLLKEEKGSILVFSHENPDADTLGSALALYLFLKKKGKNVKVGCKDMVPHFLDFLPHWEEIIRLPTTEVFDVGIVVDASGFYRAGTEVRAIRKVRIDHHIGGEFYGMYDYIDPSAPSTTAIIYQLLKLWDESAIDTEIAQCLYAGLATDTGFFKYSNTSAETFQMAKELVEKGADPHRTYIMFSERESLGKMKLISKVLDTLTLYEDGLVAGIVIYDRFFKETGTTYPDSEGLVNFPRSIEGVEVAFALIEKPDEGVWKVSLRSKERVNVASVASRLGGGGHKYASGCKIRASSASEAINMVLFAIKEELTEPSAQTVQCPA
>NC_017161|773709:784863|778284_779472_-|WP_012963478.1|DBSCAN-SWA
MIASIVEEVSKRLDGGLCVELPDGKVLGAGKCKVRIKDKDVIKKVLKDPEMGFGEAYIKGGIEVDGDLESFLVACTCYLREKDEDKSFRNSWGRMLLKYLGLLKFLEGKEVRRHYDLGNDFYQLWLDSSMTYSCAFFSNKDQSLEEAQAEKRSIIYEKLQLTDGDSLLDIGCGWGSIILEAPKLYNIEATGITLSKNQYEYVKSRIESEGLKDRVRVYLMHYEDLPKLDKKFNKVVSVGMFEHVGKGRHRKFFRVVEKVIHEGGLFLLHTIGKVLPESQSRWIRKYIFPGGYIPALTEILEASKGLGFNLIDIDDWRLHYYRTLREWRKRFYQHTRDVVQKHGEEFFRMWELYLVSSAVSFLTGSNHLFQILFSKGVLNNYPIMKRQFIVNNFVV
>NC_017161|773709:784863|776752_778018_-|WP_012963477.1|DBSCAN-SWA
MLKVESVYRWEGSLKVPQEGKFIKLKEDKSIEVPNFPIIPFIEGDGIGAEIMPAMIHIVNTAVEKAYGGSRNIFWVELLAGDKAEEKTGKRMPEETIEFLKEAVVGIKGPLGTPVGKGGKSLNAILRQSMDFYSAIRPVYWLGQPAPIPNPERVNVAVFRENSDDVYMSIEYMPKEERTQKVRKFFIEEMGVSEYALPEDCGITVKPMSEFKTKRHVRKALRWALQNNKKVVAVVGKGNIMKATEGAFMNWAFEVAKEPEFEGKVITEGEPKDGQVLMVKVITDQMLMQLVLKPEAYHVIITQNLNGDYISDLASALVGGPGFVPSGNIGDGYALFESTHGTAYDIAGKGIANPLSLTLSGAMMLEYLGWKEASELIYSAVKRTIAERLGTPDIANGFRKQGLEAKELTTLEFAKAIADRI
>NC_017161|773709:784863|782094_784863_-|WP_012963482.1|tRNA|DBSCAN-SWA
MKDYKDTLNLPKTDFPMKAHLPEREPLILKKWEGLYKKLQKLTSDRPLYVLHDGPPYANGNIHIGHALNKILKDVINKYMLLSGYRVHYIPGWDCHGLPIEQQVEKELQAKNIKKEDISKQEFRKLCREYAKRFVNIQREEFKRLGVLGDWENPYLTMDPAYEACEVRELGKLFHKGLIIRSKKPVYWCIYDKTAEAEAEVEYYDREDPSIYVRLPLKGEENTFFAVWTTTPWTLPANMGLMVGEDYTYVYYQVGKETYIIAEDLVENFQNTTGLKGSITKKVKGKELIGLSYIRPYAEEEGKVYPSEFVELSSGTGIVHMAPGHGREDYIVGLRYGLEPYSPVDDEGRFTQEAPPFLRSVRVFDANRLIVEDLKKRGFLIYEGRITHSYPHCWRCKNPVIFRSTPQWFISMEGKLNGKTLRELSLEEIEKVKWIPSYGKNRIKSMVESRPDWCISRQRYWGVPITVFYCKSCGNVVADKEVFEHVAKLIESSPKGSDIWFELSEKELLPEGYKCPNCGSEDFKKEEDILDVWFDSGSSHACVLRRLGIDTADMYLEGSDQHRGWFQSSLLESVASYSKAPYRAVLTHGFTVDEQGRKMSKSLGNVISPQEIIKQYGADILRLWVVSEDYTEDVKLGKSILQRIVEDYKKIRNTLRFLLANLYDFSPQRSIAYHQLHHFDRWMMSYLQMLLEEIGRFYREYAFHRVYQTIRNFCSVDLSSLYLDVLKDRLYIYAPDSWERLSAQTVLYELAIALTTSIAPFLSFTAEEVWEHLRNIDNRLPESVFMSKIPQSQESLIDRELLKDYEVLGRIREDVMRAIEQARRDKYINHPYEARVFLWGDVSLLEKYQDYLKFYFTVSQVELKEGGKYRLTAESLKGLHIGVDRAKGRKCPRCWVYYPEEEFVGEVCQRCANAIAKTGQRV
>NC_017161|773709:784863|773709_775599_+|WP_012963475.1|DBSCAN-SWA
MLLYQFLLKRGLESRKSQEEFFKLMLSAMEEGGVKIIQAPTGTGKTYGYLIPIVEKGQKAIISTGTKLLQEQLRRDLEVIKSYAGYILGNHVSYVVLKGKSNYLCLDRYYAEAQKVPELEMAINSGWDGDFEFVNLDVDLREKLCVDDDYCTPYYRNMCKYRYECYYWSKLKNLEKSAQILIINHALLSLREFENPEERLLVIDEAHELDKYITSSLKTGFSTYTLRIDILGRIREFLPSAHVDIESFFTDNFEHLFKEGKEEVALENLCPYAEDFEKRIMTALFSLYQRVKEEVMHSIHSFLKERLFVSLKLKDYLLNSGVLAWEDYLKINSNYEELSQEEEKLLKKLKTYQLLTKRLTRLKEFFQLMKEEKPEMGYMVSRSWSRKLQTYNYRLECFPVFPSGFIDFSGYKAVVITSATANPIDLEKTLGIVGDYYELEHTLPYHQIDFVVYLVDPREEDWKDCLMRAYKYLRTLYDKVLILLTNREHMKLFEKEEGLAFQGEDSLSKLVEHLREGRIKALAGLDSLWFGIDVKGEKGLLMAKLPFESPEDPITFHRIRFLKSVGEDPFEYQKRKALIKFQQGIGRLIRSKEDRGTIVLCDKRIFKFKEFLRVVEKLGIKVRVVKMLK
>NC_017161|773709:784863|779569_780211_+|WP_012963479.1|DBSCAN-SWA
MSRMLLCLFLISVSFAFFPFTGEDADTLGKGGLQWETQYARFKHYDETVHKDVVLQITGGIKDNTDIALIIPYSFYRYKDGTRNDGFSDVGVFIKHIPVEAGNFKAGYKLQLNFNTGKEGIGYGKITGNVNLIAQVCKDSMCYNTNFVYIKASFVEELRDTYGIILSNYKKLGKSLTLGGEVKLLRPAEDGVNKLDSHILLGSVYSFDKLSVA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012963475.1|773709_775599_+	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	6.6e-27	24.8
WP_012963476.1|775609_776788_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.8e-11	25.5
WP_012963477.1|776752_778018_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_012963478.1|778284_779472_-	class I SAM-dependent methyltransferase	A0A2K9L4K8	Tupanvirus	8.3e-52	35.5
WP_012963479.1|779569_780211_+	hypothetical protein	NA	NA	NA	NA
WP_012963480.1|780245_781088_-	deoxyribonuclease IV	A0A2L2DJK8	Acanthamoeba_polyphaga_mimivirus	8.0e-25	28.9
WP_014462594.1|781075_782071_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	G3MA01	Bacillus_virus	1.4e-20	26.9
WP_012963482.1|782094_784863_-|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	5.0e-92	27.5

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NC_017161|1150594:1160021|DBSCAN-SWA
GATGGACCCCGTAGGCATAGTGCTTGGGACAAGACCTATATCTCCCCTTGAGTTCTGGATAGGTATTCAGGAGCATCACCTTCTTCAGCTGGATGATGTAGTGTATGTAGAATCTACAATAAATGATAGTAAGGTGACCTTTTACGGGATAGTTCAGGAAGTACAGAAGTTTCTGGAAGGTGCTGAATCTGTTTATGACGCTCACCTTGTGACTCGTGGTATTATACCTGTCAACATAGCCTACACCGCAAAGGTAAGCATCACAAGAATAGAACCGGAGCTTTTTGTTCCACCAAGCCCCGGGGATCCGGTTTTTAAGGCAACAGGAAGGCACTTGGATAAGGCGCTTTACTACGACCAGATGAAGGTAAAAATCCCTGCCGGCATCACCAGAAGTGGAGACCCCGTTTATATTAACTACCACTTCCTCAATGGCAAAGAGGGCGCTCATGTGAGCATATCGGGTATGTCTGGCATTGCCACAAAAACCTCCTATGCTCTCTTTTTGCTTTACTCCCTTTTGAATAAAGCGGATGACCTCAAGCAAGGTGTTCACGGTATGATCTTCAATGTAAAGGGCAAAGACCTTTTGTGGATAGACAAAAAGAACCGTAATCTTTCCCAGGAGGATAGAGAAATCTTTGAAAGGCTTGGACTTAAACCAGAACCCTTTAAAAAGGTGGTCTTTTATGTACCACCAGATGAAAGGGACCCTAACATCCCGGCGTGTGAGAGGTTTGATGACAAGGTAGTACCTTTTTACTGGAGTATGAGGGAGTTTGCGCAGGAGGGGCTTATAAAGTTCATGTTTGTTGAGGGTGAGGAAGGCATGTCTAACATAAATTATGCAATAGACAGGGTTGCCAATAAACTTTACAGTCTTGCCAAGCAAAGCCCAGGGGATAGATTGATAGACAGCTACGGCAGAGACATAGAAAGCTTGGAAGACTTAGAAAGGGTGCTTGAAGAAGCTATTCAGGACAGGTATCAAAACAAAAACTCGGAACTGTATAAAGATTGGTTTGGTAATGCGGATACCCAAACAACCTACGCCTTTATGAGGAGGTTCCAAAGGGCTATTACCTACATAAAGAGATTTGTGAGAGGGAGTCTCTCATCACCTATAAACTGGAAGGACCACAAGCTGTTGGTGATAGATATAAGCGGGCTTCACAGCATAGCCAAGATGTTTGTGGTGGGTTCTATCCTCAAGAAAGTCTTCAGGGAAAAGGAGGAACAATCTAACCCTTACCCCAAGCTCTTTGTGGTGCTGGACGAGCTCAACAAGTATGCGCCCAAGGAGGGTTGGAGTCCCATAAAGGACATACTTCTTGACATAGCAGAAAGAGGAAGAAGCTTAGGCGTTATACTCATAGGCGCTCAGCAGACAGCCAGCGAGATAGAAAAGAGAGTTATTGCCAACTCGGCGGTGAAGGTGGTGGGAAGGATGGATAGCTCCGAAGTGCTTAGCAAAGAGTATGAGTTTCTTGTCGGAAATTTCAAGCAAAGAGCCATAATGCTAAAAAAAGGCACCATGATCATGTATCAACCAGATATACCCACTCCCATCATCTTCAGGTTCCCAAGACCGCCTTGGGCAACCAAAAAGGAGGAAGTAGAGGAGGAGGTGCATGTACCAGAGGATTTTAATAATTTTTAGCCTGCTCTTTTGCCTCTCCTTTGGTCAGGTGGTGAGCGTAAGGTACGGCGATTATCAGGAAAAGGAAAGGATAGTTTTAGACTTTGACCAGAGGGTTGACTACCGAGTTATTTTGCTGGAGGCTCCCAAGAGGATAGTGGTGGATGTACTATCCGAAAAAGACTTCAGCCTAAGAGTGCCAAAAGGTATAGCCTATCGCGTGGGAAAGCATCCGTGGGGCACGAGGATCGTGTTTGAAAAGGACTTTTCCAGTGTAAAAGCTTTTTCTTTAGAAGACCCCTTTAGGATAGTCATAGATGTGTTTAAAAGTGCAAGCAAGGAAGATAGAGAGGTTAAGGAGGATGATGCTCTCATAGCCATTTTAGACCCCACTGTCCTAAAGGTCATACAGTACAGTGAAGGAACAAAGGAGCGGGTGATAAGTGAGCGCAAAAAGGGTGCCATCCTGACGCAGAGGAGAGTCATTGTGGTGGATGCGGGACACGGTGGACACGACCCTGGCGCCATAGGTTATATGAACATAAAAGAGAAGGATGTAAACCTTGCCATAGCAAAGAAGTTGGCGGAATACCTTTCAAAAGATGGAAGATTTAGGGTAATTATGACAAGAAAAGATGACACCTTTATACCCCTTCAGGAGAGGGCAAACATAGCTTTAAGGAACAGGGCGGACCTGTTTATAAGCATTCACGCCAACGCATCTCCTCAAGGCATATCTCAGCATGCAAGCGGCACTTATGTGTTTGCCATATCCTCCGATGCTGCCAAAAGAAAGAAGCAACAGATAATAAACAATGACAGCTATGCTAAGTTAGTTTTGGGAGCATCAGATGTTCCTATAAATGCGAGGAAAGTGCTGGCAGACTTGGCAATGGATGTCACCCTTTATGAGAGTGTATCCTTTGGTGAGAAGATAGCAAAAAGTATTGCAAGAGAGCTGGGCAGGGAGGTGGAGTTTAAGGGAATCCAGCGGGCTGGCTTTGCTGTATTAAAAACACCAGGCATACCCTCCGTCTTAGTAGAAGCAGGTTTTATAACTAATCCTGACGAGGCAACCCTTATGGCGGACAGAGACTTTCAGGATAAATTTGCCTACGCCATATACAGAGCTATAGTCAATTACTTTTTCCCCACCGAAAGGAAGCTCACTTTAAACCAATGAGTTTGTGCATTTGAGGTACAACTCTAACGGTGTATCCTTCTCTAAGCAGAAGGTTTTGAAGCTCAAGGGCTTTTTGGAGGAATTTAGTCTTATTACCTTCTGGCTGAAGCACCACCAAACCCTCCTCTAAGAAAGGCATAAACTCACGCCTTTTTATCACATTATAGCAAAGCTCATGGTCAACTACAAACTTTAACTCTTTGGCGCTTGAGAGCACAGCTGGGTGTACATACCAATCCGCCACACCCTTAGGTGAGCATGTTATATGCACCTGAGAGACCACCTCTCTTAAGTTTTCATTCCAGAGAGTTCCATTGGTCTCTATCTGCACTGAATACCCTCTGCACAAAAGCTCCTGCACCAGAAGGTGCAGGTTTGGCTCGGCAAAAGGTTCACCACCTGTTAGGACCACGTGTTTTTGAGGATACTTTTGGAGCTCCTGCAAAAGTTCTTTTAGATCTGTGTTTGCTCTCTTGAAGGATAAAGCGGACGGCTCATCACACCAGGGACACCTGAGATTACATCCCTGAAACCTCACAAAAAGACAGGGCTTTCCTATCAAAAGACCCTCACCTTGCACGCTGGGGTATATCTCGTTTATGCTCAGAGCTGTGCTTGTTCTAACTTCACTTCGTAGCATTCTATTATATCACCCACCTTTATGTCGTTATAGTCTTTGAGTTTTATGCCACACTCATATCCTCTTGCCACTTCTTGCACATCCTCCTTGAACCTCTTTAAGCCTTCTATTTTACCATCGTACACAACTACACCATTCCTTATGAGCCTCGCCTTTGCGTTCCTCAATATCTTCCCGTCAAGTACATAACAGCCCGCCACACTCCCTACGGACTTTATCTTAAAGACAGCCCTGACCTCTGCAGAACCTAAAACTACCTCCTTCTCTACGGGCTTTAACATACCTTTTAGAGCCTTCTTTACATCATCCACCACTTCGTAGATAATGCCGTATAATCTCACATCCACCTTTTCCCTCTCTGCCGCTTCTTTGGCTTTCACATCTGGTCTTGTGTTAAAGCCTATCACTATAGCACCGCTCGCTTTTGCCAGCATAATGTCATTTTCTGTTATACCACCTACATCTCCGTGTATTATTTTGACAGCTACCTCCTGCGTGGATATTTCCGACAGGGACTTCTTTATGGCTTCCAAAGAACCAACCGTATCCGTCTTAACTATCAGCCTGAGCTCCCTTATTTCTCCTTCCTGGATCTTTCTAAAGACCTCTTCAAGGGCAAGACCCTTTGAAACCTTCTCTAAATGTTCTTTCTGCAGTTTTCTAGCTTCCGCTATGTGTCTTGCGGTTCTTTCGTCATCCACCACCTTGAGAGTATCACCAGCCATGGGAAGGTCCTCAAAACCGAGCACTTCCACCGGAGTGGATGGACCCGCAGACTTTAGCCTCCTGCCCTTGTCATCCATCATAGCTCTAACTTTCCCGTAGGTTATGCCTGCTACGAATACATCACCTACTTTGAGTGTACCTTCTTGCACCAGTACTGTAGCCACAACTCCCTTCTGCTTGTCCAGTCTTGATTCTATGATGGTACCTTTCGCCTTTTTGGTAGGGTCAGCTTTGAGTTCAAGCATTTCAGCCAGTAGTAGTATATACTCAAGAAGCTGGTCTATGTTTTTACCGGTTTTTGCAGAGACATCCACAAATATGGTATCGCCTCCCCACTCTTCGGGTATAAGCCCCAGTTCTGACAGTTCCCTTCTGACTTTCTGAGGGTCAGCCCCCGGCTTGTCTATCTTGTTGACAGCTACCAAAATGGGTACATTAAAGGCTCTTGCATGATTTATGGCTTCAACAGTTTGTGGCATTACTCCATCATCCGCAGCCACCACCAGAACCGCTATATCTGTAACTTGCGCACCTCTTGCTCTCAGAGATGTAAAGGCTTCGTGACCGGGTGTATCTAAGAAGGTTATCCTTCTTCCGTCTGCCAACTCAACCACCGAAGCACCTATTTGTTGGGTTATACCGCCTTTCTCCCTTTCTGCTACATTGGTTTTACGTACAGCATCAAGGAGTGTTGTCTTTCCGTGATCCACATGACCCATAACTACCACAACCGGTGGCCTTGGCTGGAGGTTTTTTTCTTCCTCCCTTTCTTCTTCCTCCTCTATTTTCTCTTCTATCTTTTTTATCTCCGCAAGGAAGCCCATGTCTTCTGCTATAGATAGAGCCACATCAGAGGGTATTGTCTGATTTATGGTAGCTAATATACCCTTCTTGAGAAGCTCTGCCATAATTTGATTTGGTGGGACTTTAAGTATTTCAGAAAGCTCCCTTACGGTAACTACTTCCGGTATTTCAATTATTTTTACCTCTTCCTCTTTTTTTTCCTCTCTCTTCTTTTTTTCTATTTGCTGCTCAAGTTTTTTAAGAAGATGCTCCTCTTCCTTGCTCGTCTTTTTCTCCACCGGTGCTTCCCTTTTGGGTTTTTCCTCCACTTTTTGTTCTTTGGGTAAAGGTGGAGGGGGTGGTGGAGCTTTTTGTTGTGGTTTGGGTTTTACCTCCTTTTTATCTCTAAGCGGGGGTCTTGCATCTTCCCTTCTGTACCTTTTGGAGCTTTCCACCTGGAGTGGTCTCTCTTCCCTCTTTTCTACCTTAATTTCTTCCTTTTTCATTTCTTGCGGTTTTTGCTGTATGTCCTCCTCCTTTTCCGTGATAAAGTTGTCATATATGATCTGCAACTCCTCCTCTTCCAGGTGTGAAAAGTTAGACTTTTCTATACCGTAAGTCTTTAAAAGATCTCTTATATCCTTCACGCTTTTACCTAACTCTTTGGCTACATCCTGCAATCTTACTTTGCTCATAAGAATTAATTATAAGCTCTCGCATAGCACTTGCAAAATCTCCTCTTTACCAAGCCCCATCTCCTCAGCGCATACTATGCGACCTTTCAGTTCCTCCTGCGGTACCTGTGTTATCTGACTGAGCATGAAATAATCAAAGTTTAAGAATACGCTCCCGTGCACCAAAAAAGCGGTTTTTAGTGTTCTCATGGCACAAGCGACGAACTTTTTTCCTCCTACTGTTAATTCCCCAAAGTTGGGATAAAAGAAGCAAAAGTAGTGGTGAGTTTGGTTGCCTCTCTGTTTGTGAAGCTCCACATTTATACCCATCTTCCTGAAGGTGTCTACCAGTCTTTCACTGAAGTTTCTGTATATGTCTGTAAAGCTCCTTCCCCAAACTTCTTTGTAATCTACCAAGGAGAAGGATATGTCCCAACCGTGCACCAGGGCACCCCCTCCTGTAGGTCTTCTAATCACCGGAAGTGCAAACTCTCTTGGCTTTTGGGAATAACCGATACTTATGGTAGGCTCACTCCACATGTATATCCTCTTAGTTGGCTCCCTCCTCCCTTCTTCAAGGGCTAACAGATTTTCCCAATCTATGGTCATGTTTTCTGCGCCAGTTCTTACCTCTATCATTCAAACACTCTCTGCAATCTTTCCGCGTTTATGTCTTTGAGTAGCTGATAGTCCTTCTTTATGTCCCTTCCTGCACGAGTCAGATAACCTCCCACCATCATGGCATTGGTCATAAGCACAGCCATACCGTGAAAGTCTCTAAGGGTCTGTTCCCTACCTCCGCAAAGCCTGAGTTCCGCCTTGGGGTTGGTGAGTCTAAACATGGCTATGATCTTGAGCGCTTGAAGGGGACCAACACCAGGCGCATCCTGCATAGGCGTACCTTCTATAGGCATGAGGAAGTTTAGGGGTATAGAATCCACCTCCAGCTCCCTGTAAGTGAGAGCAAGAGCCACCCTGTCCTCGTCCGTCTCACCCATACCGAATATGCCACCGCAGCATGTGGAAAGTCCCACAGCCTTTATGCGCTTTATAGTCTCGTAGCGCTCTCTCCAGGTGTGAGTGGTGACTATGCTGGGGAAGAACCTTTCGGAAGTTTCAAGGTTGTGATTTATCCTTTTGACTCCTGCAGATTTTAGTTTTACAAGCTCCTCCTCATCAAGAGTGCCTGCGGACACACACACATTTATAGGTAGCTTTTCCACATGCTTTATCTCCCTTACCGCATCCGCTATCTTATCCACCTCCTCCTTGGAAGCTTTCTTTCCGCTCAAAACCACACAGTATCTGTTGGCACCAAACTCAACACCTCTGTAAGCACCTTCCATTATCTCCTCTTTGGGCACCAAGGCGTATATGTTTATGGGTGTTTTGTAAAATTTAGACTGGGCGCAAAACTTACAATCCTCCGAGCAAGCACCACTCTTTGCGTTTATTATGGAGCAAAACTCCACCTTTGAAGGTGAAAAGAAGGCATTTCTCACCTTCTGGGCTGTGTAGACAAGAAGAGCTATGTACTCATCTGGAAGCCTTAGCACAGCAAGAGCCTCTTCTTTTGTGAGAGGCTCATATCTTAGCGCCTTTTCTCCCATATCTATGATAAACTTCTCAAAGCTATCCATCTTATCACCTCCGTATAAATCATATATACCTTCCTTCGCTTTTTAGCAACACATTTATGTACCTACCTTTTTCCTGTATGCTTTCTACAGTATAGTCGTAAAAGTTTATCTTAAAGAGATTTGAAATGTTTAGGTTCTTTTCTGCTATATAACGAAGGGTGTAGGCTCTGTGGGGCATGGGATTTTTTACTTTCTTGTTGGCTTTGTAGTACTCAAAGGTGATAACTTTGCTTGCGGTAGAAAGGTCCAGAAGAGATGCCTCTTTTTTACCTACAAAAAGTATAACCACTTTGTCTTCCAACAGCTTTTTGGTGAGGTTTTTTATATCTTGAACCCAAAAGTCTCTGAGCTTTACACCTTCGCACTCATCCTCCCAGCCAAAGTTATACTTAGGCGTCGGGCTATCCACCAGAGCGATACCTAAAAGAGGCGAAAGGACTAAGGACCTCTCCTTTATACGCTTTTGGACAGCAGGAGGAAGCACCCAATACTCAAGGCTCTCCCAGAAGGCATTCTTAAACCTTCTGAATACAGGCAGAAGGTCATCACCCACACTAAAGCATCTTACGAGTTTTTGAGCTTTTGTCTCAAAAAATCCCGTATGTGGCATGCTTTGTTGAGAGCCTTTCATCTTTGACTGCTTTTTGCTGGATGGCAGTATGTAAAACATTTTTAGTGTCTCCAAAGGATCACCACCTCTCCTTTTATCTCCTTCCTTGAAAGGAGCTCCTCATACACCTGTGCAAGCTTGCCTCTGAGAAACTCCTCATGCATCTTGGTTAGCTCCCTTGCCACGCATATGGGCAGATCCTCTCCATAGACCTCTTTCATGACCTCAAGGCTCTTTAATAAGCGGTTTGGTGATTCAAAAGCTATAAAAGTTGTGCCTTCACATTTTTTGAGGTCCTCAAAGAATCCACCAAGACCCTTTCTTGGTAAAAATCCTACAAACAAAAATCTGTCGGTGGGAAGCCCCGAGCCTACAAGTGCCGTCAGGACTGCGCTTGGTCCTGGAATTACTTCCACCTGGATACCTCTGTCTATGCAAGCTTTTATCAGTTTGTATCCTGGGTCTGAGATGCTTGGAGTTCCGGCATCGGTAACAAGCGCCACATCTTCCCTCTCAAGGAGCTTTAGTATCTTGGGCACCTGAACACTCTCCTTTGGTTCGTAATAAGAAAGGAGCTTTTTACCCTCTATCTTAAAGTGGTTCAGAAGGATGCTGGTTCTTCTGGTGTCTTCGCAGGCTACAAAACTCACTTCTTTGAGCACTTCTAAGGCTCTTAGTGTTATGTCTTTTAAGTTACCTATGGGTGTGGCAACCACATAAAGCTTCCCCATTTCACTTCACCAGAAGCATCGGTATGTCAAGATGATGCATCACAAAGGAAGTGACGCTACCAAAGAAAAACTCCTTAAACCTCCCTTTTGAGAAGGCACCCATAACCAAAAGGTCTATATTGTTTCCTTTACAATACTCCACTATCTTCTCTTCGGGAAATCCCTTAAGATGCTCATAGTGATCTACTTTTTGGGAGATGTCTTCTGAAAGGTTGTCCTCACCTACATAGATAGCCTCAAGTTCAAAGCCAAAGAGGGGTTTAAGATACTGTGCTACACTCATTGCCTTTTTTGACATTTGCCTGCCGTCGTATGCTACGCAGACTTTTCTTATGCTTCTCTCCTCCTCGGGTGAGAGAAAGACGGCACACGGCGACCTTCTGGCTACCATGTCCGCATTGGAACCCAAAAGAAAGCCCTCTATGGGTCTTTTACCCCTTTTTCCTAAGAATATGATGTCTTCCTTATCCGCCTGAGAAACTATCTCCTTGTAAGGCACACCCACCGTTTGGAAGGAGGAGACTTTTAATCCTCTCTGCCTTCCCAAGCTTAAAAACTCATGCAGAAGCTCATCCGCCTGAGCTTCTAAAAACTCCCTTACCTTGGAAGAAGCACCGTAGTAAAAGGTAAACCCCAGGACTCCTGCCAGGTCTTCAAGAAAGCTCTCCTCTATGAGTCTCTCATCCACTATGTGAATGCCCACTACAGGTATATCCAACTTGCTGGCAAACTCAAAGGCGTAGTTGCAGGATGTCCAGCCTGACTTAGATCCATCCACTCCTACCAGCAACCTCTTAAACAT

Protein sequences of DBSCAN-SWA_2

>NC_017161|1150594:1160021|1153398_1154055_-|WP_012963902.1|DBSCAN-SWA
MLRSEVRTSTALSINEIYPSVQGEGLLIGKPCLFVRFQGCNLRCPWCDEPSALSFKRANTDLKELLQELQKYPQKHVVLTGGEPFAEPNLHLLVQELLCRGYSVQIETNGTLWNENLREVVSQVHITCSPKGVADWYVHPAVLSSAKELKFVVDHELCYNVIKRREFMPFLEEGLVVLQPEGNKTKFLQKALELQNLLLREGYTVRVVPQMHKLIGLK
>NC_017161|1150594:1160021|1156873_1157878_-|WP_012963905.1|DBSCAN-SWA
MDSFEKFIIDMGEKALRYEPLTKEEALAVLRLPDEYIALLVYTAQKVRNAFFSPSKVEFCSIINAKSGACSEDCKFCAQSKFYKTPINIYALVPKEEIMEGAYRGVEFGANRYCVVLSGKKASKEEVDKIADAVREIKHVEKLPINVCVSAGTLDEEELVKLKSAGVKRINHNLETSERFFPSIVTTHTWRERYETIKRIKAVGLSTCCGGIFGMGETDEDRVALALTYRELEVDSIPLNFLMPIEGTPMQDAPGVGPLQALKIIAMFRLTNPKAELRLCGGREQTLRDFHGMAVLMTNAMMVGGYLTRAGRDIKKDYQLLKDINAERLQRVFE
>NC_017161|1150594:1160021|1159220_1160021_-|WP_012963908.1|DBSCAN-SWA
MFKRLLVGVDGSKSGWTSCNYAFEFASKLDIPVVGIHIVDERLIEESFLEDLAGVLGFTFYYGASSKVREFLEAQADELLHEFLSLGRQRGLKVSSFQTVGVPYKEIVSQADKEDIIFLGKRGKRPIEGFLLGSNADMVARRSPCAVFLSPEEERSIRKVCVAYDGRQMSKKAMSVAQYLKPLFGFELEAIYVGEDNLSEDISQKVDHYEHLKGFPEEKIVEYCKGNNIDLLVMGAFSKGRFKEFFFGSVTSFVMHHLDIPMLLVK
>NC_017161|1150594:1160021|1157897_1158548_-|WP_012963906.1|DBSCAN-SWA
MFYILPSSKKQSKMKGSQQSMPHTGFFETKAQKLVRCFSVGDDLLPVFRRFKNAFWESLEYWVLPPAVQKRIKERSLVLSPLLGIALVDSPTPKYNFGWEDECEGVKLRDFWVQDIKNLTKKLLEDKVVILFVGKKEASLLDLSTASKVITFEYYKANKKVKNPMPHRAYTLRYIAEKNLNISNLFKINFYDYTVESIQEKGRYINVLLKSEGRYI
>NC_017161|1150594:1160021|1152224_1153415_+|WP_012963901.1|DBSCAN-SWA
MYQRILIIFSLLFCLSFGQVVSVRYGDYQEKERIVLDFDQRVDYRVILLEAPKRIVVDVLSEKDFSLRVPKGIAYRVGKHPWGTRIVFEKDFSSVKAFSLEDPFRIVIDVFKSASKEDREVKEDDALIAILDPTVLKVIQYSEGTKERVISERKKGAILTQRRVIVVDAGHGGHDPGAIGYMNIKEKDVNLAIAKKLAEYLSKDGRFRVIMTRKDDTFIPLQERANIALRNRADLFISIHANASPQGISQHASGTYVFAISSDAAKRKKQQIINNDSYAKLVLGASDVPINARKVLADLAMDVTLYESVSFGEKIAKSIARELGREVEFKGIQRAGFAVLKTPGIPSVLVEAGFITNPDEATLMADRDFQDKFAYAIYRAIVNYFFPTERKLTLNQ
>NC_017161|1150594:1160021|1158550_1159219_-|WP_012963907.1|DBSCAN-SWA
MGKLYVVATPIGNLKDITLRALEVLKEVSFVACEDTRRTSILLNHFKIEGKKLLSYYEPKESVQVPKILKLLEREDVALVTDAGTPSISDPGYKLIKACIDRGIQVEVIPGPSAVLTALVGSGLPTDRFLFVGFLPRKGLGGFFEDLKKCEGTTFIAFESPNRLLKSLEVMKEVYGEDLPICVARELTKMHEEFLRGKLAQVYEELLSRKEIKGEVVILWRH
>NC_017161|1150594:1160021|1156268_1156877_-|WP_012963904.1|DBSCAN-SWA
MIEVRTGAENMTIDWENLLALEEGRREPTKRIYMWSEPTISIGYSQKPREFALPVIRRPTGGGALVHGWDISFSLVDYKEVWGRSFTDIYRNFSERLVDTFRKMGINVELHKQRGNQTHHYFCFFYPNFGELTVGGKKFVACAMRTLKTAFLVHGSVFLNFDYFMLSQITQVPQEELKGRIVCAEEMGLGKEEILQVLCESL
>NC_017161|1150594:1160021|1150594_1152253_+|WP_012963900.1|DBSCAN-SWA
MDPVGIVLGTRPISPLEFWIGIQEHHLLQLDDVVYVESTINDSKVTFYGIVQEVQKFLEGAESVYDAHLVTRGIIPVNIAYTAKVSITRIEPELFVPPSPGDPVFKATGRHLDKALYYDQMKVKIPAGITRSGDPVYINYHFLNGKEGAHVSISGMSGIATKTSYALFLLYSLLNKADDLKQGVHGMIFNVKGKDLLWIDKKNRNLSQEDREIFERLGLKPEPFKKVVFYVPPDERDPNIPACERFDDKVVPFYWSMREFAQEGLIKFMFVEGEEGMSNINYAIDRVANKLYSLAKQSPGDRLIDSYGRDIESLEDLERVLEEAIQDRYQNKNSELYKDWFGNADTQTTYAFMRRFQRAITYIKRFVRGSLSSPINWKDHKLLVIDISGLHSIAKMFVVGSILKKVFREKEEQSNPYPKLFVVLDELNKYAPKEGWSPIKDILLDIAERGRSLGVILIGAQQTASEIEKRVIANSAVKVVGRMDSSEVLSKEYEFLVGNFKQRAIMLKKGTMIMYQPDIPTPIIFRFPRPPWATKKEEVEEEVHVPEDFNNF
>NC_017161|1150594:1160021|1154018_1156259_-|WP_012963903.1|DBSCAN-SWA
MSKVRLQDVAKELGKSVKDIRDLLKTYGIEKSNFSHLEEEELQIIYDNFITEKEEDIQQKPQEMKKEEIKVEKREERPLQVESSKRYRREDARPPLRDKKEVKPKPQQKAPPPPPPLPKEQKVEEKPKREAPVEKKTSKEEEHLLKKLEQQIEKKKREEKKEEEVKIIEIPEVVTVRELSEILKVPPNQIMAELLKKGILATINQTIPSDVALSIAEDMGFLAEIKKIEEKIEEEEEREEEKNLQPRPPVVVVMGHVDHGKTTLLDAVRKTNVAEREKGGITQQIGASVVELADGRRITFLDTPGHEAFTSLRARGAQVTDIAVLVVAADDGVMPQTVEAINHARAFNVPILVAVNKIDKPGADPQKVRRELSELGLIPEEWGGDTIFVDVSAKTGKNIDQLLEYILLLAEMLELKADPTKKAKGTIIESRLDKQKGVVATVLVQEGTLKVGDVFVAGITYGKVRAMMDDKGRRLKSAGPSTPVEVLGFEDLPMAGDTLKVVDDERTARHIAEARKLQKEHLEKVSKGLALEEVFRKIQEGEIRELRLIVKTDTVGSLEAIKKSLSEISTQEVAVKIIHGDVGGITENDIMLAKASGAIVIGFNTRPDVKAKEAAEREKVDVRLYGIIYEVVDDVKKALKGMLKPVEKEVVLGSAEVRAVFKIKSVGSVAGCYVLDGKILRNAKARLIRNGVVVYDGKIEGLKRFKEDVQEVARGYECGIKLKDYNDIKVGDIIECYEVKLEQAQL

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012963900.1|1150594_1152253_+	ATP-binding protein	A0A139ZPI2	Marinitoga_camini_virus	8.0e-37	26.6
WP_012963901.1|1152224_1153415_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	2.1e-18	30.9
WP_012963902.1|1153398_1154055_-	7-carboxy-7-deazaguanine synthase QueE	A0A1B0Z0A9	Vibrio_phage	1.1e-18	33.5
WP_012963903.1|1154018_1156259_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.3e-26	25.5
WP_012963904.1|1156268_1156877_-	lipoate--protein ligase	NA	NA	NA	NA
WP_012963905.1|1156873_1157878_-	biotin synthase BioB	NA	NA	NA	NA
WP_012963906.1|1157897_1158548_-	hypothetical protein	NA	NA	NA	NA
WP_012963907.1|1158550_1159219_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	6.7e-43	45.9
WP_012963908.1|1159220_1160021_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	4.8e-11	24.6

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NC_017161|1452831:1459020|DBSCAN-SWA
TATGAAAGCTCTTGCGATAAGACATGTAAAAATTGAGCATCTTGGTATGCTTGAAAGTGTGCTTAAAGAGCTTGGCTTTGAATTTGAGTATTTGGATACTGCAGAAGGACAAACATTAAAAAGACCCTTAGAAGACTATAACTTACTTATTGTACTTGGAGGGTACATGGGAGCATACGAGGAGAACATCTTTCCCTTTCTCTCTTACGAATATAGGATTATTGAGCGAGCCTTAAGTTTAGCCACCCCCATCTTAGGCATATGTCTGGGCGCACAGATGTTGGCAAAAGTACTTGGTGCAAGGGTTTACAGGGGAGAAAAGGGTAAAGAAATAGGCTGGTTGAAAGTGTATAAAAGGGCGCATCATCCTTTTTTTGAAGACTTTCCAGATGAGCTTACTGTTTTTCAATGGCACGGTGACACTTTTGAGCTTCCCAGGGGTGCGGTCAGAGTTTATTCGTCAGAAAAGTACGAGAATCAGGCTTTTGTTTACGAGAAGGCGGTGGGACTACAGTTCCACATAGAGGTAGATAAGGAGATGGTTCTTGAATGGGCAAAGCACTATCAGGACGAGCTAAAGCAGGAAGGTATAAGCTTTGAACATTTGGAAGGTTACAAAGGATCGGAAAACGTCATCCTTTTAAAGGAACTCATAGGTAAGCTCTGCCTATGTTGATGGAAAGCCCAAGAGGTATTATAATGAACTTAAGCTATGAGGATAAGGATTGCCCACAGTCCAGATTCAGACGATGCCTTTATGTTCTATCCGATGGTGTCTGGTGAGATAGACACTGAGGGATTTCAGATAGAGCATGTGCTTGCGGATATAGAGACCCTAAACAGGGAAGCTTTCAAGGGAACTTATGAAGTCTCTGCCATATCCTTTCATGCCTATCCTTATGTAGCTGACAAGTATCTGGTGCTTCCCAGTGGGGGAAGCGTAGGCGATGGATACGGTCCCATAGTAGTTTCCAAAAAACCGCTTGACACACTCAGAGGCAAAAGAGTAGCCATTCCGGGAAAGCTCACCACTGCTTATTTGGTGCTAAAGCTTTACGAGCCTGACTTTTGTGAAGAAGTGGTTCCCTTTGACCAAGTTATGGACAAGGTAGAAAGACAAGAGGCGGATGCTGGGCTTGTCATACATGAAGGTCAGATAAGTTATGCCGACAGGGGACTTTTGAAATTTGTGGACCTTGGTCAGTGGTGGAAGGAAAAGACTGGATTAGCCTTACCCTTAGGTTGTAATGTAGTAAGAAAAGACCTGGGAGAGGAAACCATCAGAAAGATAGAGAGGCTTATGAGAAGGAGTGTAGAGTATGCTCTTTCTAATGTGGACAAAGCTTTGGAGTATGCCAGAGATTACGCAAGGGACATAAAGGAAAGCCAAGAGAAAGCTTTCAAGTTTGTTAGCATGTATGTAAATAGCAGGACGGTAGATTACGGAGAGGATGGAAGGCAGGCGGTTAGACTTTTGCTGAGTCTTGGCAGAGAAAGGGGCATAATAAATGTGGATATACCAAGTACCATCTTTTCTGATGAAGTATAATAAATAGCAGTCCCCGTAGCTCAGAAGGATAGAGCGCGAGATTCCTAATCTCGAGGTCGGCGGTTCGACTCCGCCCGGGGACGCTTTAAAGGATGGAGATAGTTATACTGGAGGGAAGCCTGCTGGATGTAGAGGCGGATGTTATAGTAAACCCTGCCAACTCCTTGGGGATTATGGGGGGTGGTGTGGCAGGTGTGATAAAAAAAGCGGGTGGCAGTATCATAGAAAAGGAAGCTATGCTCAAAGCTCCCATAAGCGTGGGTTCTGCCATCTTTACATCTGCGGGAAGGCTCAAGTTCAAAGGTGTGATTCACGCGCCCACTATGGAGGAGCCTGTTATGGAAACCACAGAAGAGAAAGTCAGAAAAGCGGTAAGAGCAGCTCTTGAGCTTGCAGACAACATGGGCTTTAAGAGCATAGCCATACCCGGAATGGGGACAGGAATAGGAAGACTCCCTAAGGGGGTTGCAGCAAAGGCTATGATGGGCGAAATTGTGAACTTTATACCCATAAACCTTGAGAAGGTTGTGCTGGTGGACATAGATAGAGAGCTTGTAGAAAAGTGGAGAGAGCATGCCAGAAAGTAGCCTTCCTTCCGAAGAGAGATTTTTCTCCTTTGAGGATTCAGAAAAACTCAAGAACTCCTTTTTAGTAGCCTGTGAGGTGCTCAAAGATTACAGATTCGTCATACTTCCAACCGTAGAGAAGTACCAACCGGAGCTATACACTGACCAATACAAACCCTTTGTTATAGGAACCTGTCAGGATGGTAGCCTTTTGAACCTAAGAACCGATTGGACGGTAAGCCTTGCAAGGTTTTTATCCAGCATAAGGCATTTGGAGCTTCCAGTAAAAGTTTTTTACTGGGGCAATGTGTTTTCGCCGATGGGGGATACGGAAAAATTTCAGATGGGAATAGAGCATCTGGGCTTTAGCCATGTGAAAAGCGATGCACAGGTCATAGAAAAGCTTTGCGAGTACTTAAAGAAGTGTTCCGTTAATGACTTTGTGGTGAATTTAGGACATATGGGCATAGTAAATAGAATACTTGAAAAGTATCGGGAGCGAGAGAAAATAGTAAAAGCTCTCTTTGAGAAGAACTTTTCGGAGCTGGGAAAGTACCCTGAACTTGTTGACCTTCTTTACACACAAGGTGGTGGCGAAGTAATTGAAGAGTTTGTAAAAAGGCATCCCGAGTTTTCCAAGGAGTGTGAGGAGCTTCTTAAGGTATCTGAACATCTAAAAGATTTTTCCCTTACCTTTGATCTTTCTGAACTCAGACTCCAAAGCTATTACACGGGTATAGTGTTTGAGATATTTCATCCCAATTTGGGCTACCCCATAGCGGGGGGAGGAAGGTACGACAGGCTATACAGTATGTTTGGCAAGGACATACCAGCAGTAGGCGGTGCGGTCTACTTGGATAGGCTACTTGAACTCTAAGAGAGTCTCTCCTTTAACTCTTCTACCTTTGTGAGCTTTTCCCAAGAGAGGTCCTCTTTGCCAAAGTGTCCGTAGCAAGCGGTTTTTTTGTATATGGGTTTTCTAAGGTCAAGGAAATCTATGATCTTTTTGGGTCCTGTGGGAAAAACTTCAAGAAGGGCTGACTTTATTTTTTCCTTATCCACCTTCTCAGTTCCATAAGTTTCAATGTCAAAAGCTATAACTTCGCTTACTCCAAAGGCGTAAGCCATCTGAACCATACACCTACTGGCAAATCCGCAAGCCACTACATGCTTAGCCATCATCCTTGCCAGATAAGAAGCTGACCTGTCGGTTTTGGTGGGGTCCTTTCCGGAAAAGGCGCTTCCCCCTGAGTATGCCACATCTCCGTATGCATCCGATACTATCTTCCTTCCCGTCTGACCCACATCCGCAATAGGTCCTCCCATCACAAACCTCCCAGAGGGGTTTATCATTATCCTTGTGGCTTCTGAGATGAGCTTTTGTGGTAGCGTCTTCTTTAACACCTCTTCGTGTATGAACTCTCTGAGTTTGTCCAAAGATACATCCGGGTCGTGCTGAACAAACACCACCAGGTCTTTTACAAAGAGGGGCTTTTCATCTTCGTAGAGGATTGTCAAAAGCACTTTACCGTCGGGTCTTAAAAAGGGCGCTCTCCCGCTCTTTCTCATCTCAGAGATGCTCTTAGAAAGAAGATGAGCAAGACTTATGGGCAAAGGCATGTAGTTTTCCGTTTCTCTGCAAGCGTATCCTATCACAGTTGCTGTATCTCCAGCACCTTCGGAGGATATTCCCAGAGCTATTTCTGGACTCTGCTCCTCTATGGAAGTTATGACGGCAGATGTATCTGCATCAAAACCGTACTCAGGTTTGTTGTATCCCACCTCCTTTATGGTGTTTCTGACCACACCGGGTATGTCCACATAGCTTTCTGTAGATACATGACCAGATACGAAAGTCATACCAGAAACGAGGAGTATCTCAAGGGAGACTCTGCTGTAGGGGTCCTTTCTGATAAACTCATCAAGAAGGGCATCAGCAATAAGGTCTGCCAGCTTATCTGGATGACCTTCCATAGGTGATTCAGCCATCTTTATGTATCTTTTCATAGCCACTATTATATTTCACTCAGGCTTTATAATGTCAGCTTTCACGTAGTCTCTCAGGGCATGAGGCACTATAACAGAACCATCTTCCCTCTGGTAGTTTTCAAGTATGGCTGCGAGCGTCCTGCCTATGGCAAGAGCCGATCCGTTTAGAGTATGCACATATATGTTTCTACCTTTTTGGTCCTTGTATCTTGTCCCCATCCTCCTTGCCTGAAATTCCTCGCAGTTGGAACAAGAAGAGACTTCCCTATATCTGCTTTGAGATGGAAACCACACCTCTATGTCATAAGTTTTTGCCGAGGAAAAGCCCATATCACCAGTGCATAAAAGCACTACCCTGTATGGAAGCTCCAGAGCTCTCAGGATATCCTCCGCATCTGAGGTGAGCCCTTCTAATTCTCTATAAGAATCTTCTGGCTTTACAATTTTGACAAGTTCCACCTTGTTAAATTGATGCTGACGGATGATGCCTCTTATGTCCTTGCCATAAGCTCCTGCTTCCCTTCTGTAGCAAGGGGTATAAGATGTGAGGTATATGGGAAGCTGATCCTCTCTTAGTATTTCATCTCTGAATAGATTAGTGAGGGGGACCTCAGCGGTGGGTATAAGGTAAAGCTCATCTCTTTCGCACCTGTAGAGTTCTTCCTCAAACTTAGGTAGCTGTCCGGTGCCTTCCAAGACCTGTGGCTTTACCAAGTGCGGTGGCATTATCTCCACATATCCTTTCTTGGCGTGCATATCCAGCATGAAGTTTATCAGAGCCCTCTCTAACTTGGCTCCCATGCCCTTAAGAACTGTGAAGCGACTGCCAGATAATTTGGCACCTCTTTCAAAGTCAAGTATGCCAAGCTTTTCTCCTATCTCCCAGTGAGGCTTTGGCTCAAACCCAAACTCCTTTGGAATCCCCCATCTTCTTACTTCCACATTATCTTTTTCGTCCTCCCCAACAGGGACACTAGTATGAGGCAAGTTAGGTATGCGTAGCATAAGATTCTTATGGTCCCTTTCCACAATAGAGAGCTTGTGCTCCAACTCTTCTATACGCTCTTTTAGCTTTTTCATCTGCACTTCAAGCGCTGTGGTATCCGCACCTTGTTTTTTCATACTGCCTATCTCTTTGCTTATGCGGTTTCTCTCGCTTCTTAGCCCTTCCAACTCTCTGATTATGCTTCTTCTCTCTTCATCAAGGATCAGCACATCATCAACAAGGGGTGGGTACTCTTCACCTCTTGTTTTTAGTCTTTCTTTCACCCAATCGGGCTTTTTCCTTATTAGTTCTATGTCCAGCATGGTTTTATAATTTTAATGCAATGAAACCTATGCAAACTCCTTTCCTTGCAGTAGATGGCATAGTAAGACTTTGGAAGGAGGAAAAATTTAGGGGGATAGTGCTCATAGAGAGGCTTTACCCGCCCTATGGCTTTGCACTGCCGGGCGGTTTTGTGGAGGTGAGCGAGACGGTAGAGCAGGCAGTAATCAGGGAAGTAAAGGAAGAGACGGGGCTAAATGCCACCATAAGAAAACTCTTGGGTGTGTATTCTAACCCTAAGAGGGACCCAAGATTTCATGTGGTTTCTGTGGTGTTCGTTCTTGATGCAGAGGGAGAACCTTCTGCGGGTGATGATGCCAAAAAGGTGCACATCTTTAGACTGGAAGATGTGCCATTTGATAAGCTCGTCTTTGATCATGCAAAGATACTTGCGGACTTTATAAAATCCTAATATTATTATATAATTACGGAGGAGAAAGCATGTTTCAGGTGCCAGAAGTGTCTTACGAGGAAGCCAAGAGAATGCTCGAAGAGGATAGCAATGTGATACTTCTTGATGTGAGAACTCCTCAAGAGCATGCACAGCTGAGGATCCCAAACTCTAAGCTCATACCTTTGGATGAGCTAAGGTATGCTTACAAAGACCTTCCCAAGGATAAAAAGTACATAGTTTATTGCAGAAGTGGGGAAAGGAGCGCCTTCGCCACATACTTTTTAAGACACATGGGATACGAAGCTTACAACTTGGCAGGAGGCATTCTAATCTGGCCCTACGAAAAAGTTTCGGGAATAGATTAA

Protein sequences of DBSCAN-SWA_3

>NC_017161|1452831:1459020|1455818_1456952_-|WP_012964221.1|DBSCAN-SWA
MKRYIKMAESPMEGHPDKLADLIADALLDEFIRKDPYSRVSLEILLVSGMTFVSGHVSTESYVDIPGVVRNTIKEVGYNKPEYGFDADTSAVITSIEEQSPEIALGISSEGAGDTATVIGYACRETENYMPLPISLAHLLSKSISEMRKSGRAPFLRPDGKVLLTILYEDEKPLFVKDLVVFVQHDPDVSLDKLREFIHEEVLKKTLPQKLISEATRIMINPSGRFVMGGPIADVGQTGRKIVSDAYGDVAYSGGSAFSGKDPTKTDRSASYLARMMAKHVVACGFASRCMVQMAYAFGVSEVIAFDIETYGTEKVDKEKIKSALLEVFPTGPKKIIDFLDLRKPIYKKTACYGHFGKEDLSWEKLTKVEELKERLS
>NC_017161|1452831:1459020|1454471_1454966_+|WP_012964219.1|DBSCAN-SWA
MEIVILEGSLLDVEADVIVNPANSLGIMGGGVAGVIKKAGGSIIEKEAMLKAPISVGSAIFTSAGRLKFKGVIHAPTMEEPVMETTEEKVRKAVRAALELADNMGFKSIAIPGMGTGIGRLPKGVAAKAMMGEIVNFIPINLEKVVLVDIDRELVEKWREHARK
>NC_017161|1452831:1459020|1454952_1455822_+|WP_012964220.1|DBSCAN-SWA
MPESSLPSEERFFSFEDSEKLKNSFLVACEVLKDYRFVILPTVEKYQPELYTDQYKPFVIGTCQDGSLLNLRTDWTVSLARFLSSIRHLELPVKVFYWGNVFSPMGDTEKFQMGIEHLGFSHVKSDAQVIEKLCEYLKKCSVNDFVVNLGHMGIVNRILEKYREREKIVKALFEKNFSELGKYPELVDLLYTQGGGEVIEEFVKRHPEFSKECEELLKVSEHLKDFSLTFDLSELRLQSYYTGIVFEIFHPNLGYPIAGGGRYDRLYSMFGKDIPAVGGAVYLDRLLEL
>NC_017161|1452831:1459020|1452831_1453506_+|WP_012964217.1|DBSCAN-SWA
MKALAIRHVKIEHLGMLESVLKELGFEFEYLDTAEGQTLKRPLEDYNLLIVLGGYMGAYEENIFPFLSYEYRIIERALSLATPILGICLGAQMLAKVLGARVYRGEKGKEIGWLKVYKRAHHPFFEDFPDELTVFQWHGDTFELPRGAVRVYSSEKYENQAFVYEKAVGLQFHIEVDKEMVLEWAKHYQDELKQEGISFEHLEGYKGSENVILLKELIGKLCLC
>NC_017161|1452831:1459020|1458702_1459020_+|WP_012964224.1|DBSCAN-SWA
MFQVPEVSYEEAKRMLEEDSNVILLDVRTPQEHAQLRIPNSKLIPLDELRYAYKDLPKDKKYIVYCRSGERSAFATYFLRHMGYEAYNLAGGILIWPYEKVSGID
>NC_017161|1452831:1459020|1458262_1458673_+|WP_012964223.1|DBSCAN-SWA
MKPMQTPFLAVDGIVRLWKEEKFRGIVLIERLYPPYGFALPGGFVEVSETVEQAVIREVKEETGLNATIRKLLGVYSNPKRDPRFHVVSVVFVLDAEGEPSAGDDAKKVHIFRLEDVPFDKLVFDHAKILADFIKS
>NC_017161|1452831:1459020|1456967_1458242_-|WP_012964222.1|tRNA|DBSCAN-SWA
MLDIELIRKKPDWVKERLKTRGEEYPPLVDDVLILDEERRSIIRELEGLRSERNRISKEIGSMKKQGADTTALEVQMKKLKERIEELEHKLSIVERDHKNLMLRIPNLPHTSVPVGEDEKDNVEVRRWGIPKEFGFEPKPHWEIGEKLGILDFERGAKLSGSRFTVLKGMGAKLERALINFMLDMHAKKGYVEIMPPHLVKPQVLEGTGQLPKFEEELYRCERDELYLIPTAEVPLTNLFRDEILREDQLPIYLTSYTPCYRREAGAYGKDIRGIIRQHQFNKVELVKIVKPEDSYRELEGLTSDAEDILRALELPYRVVLLCTGDMGFSSAKTYDIEVWFPSQSRYREVSSCSNCEEFQARRMGTRYKDQKGRNIYVHTLNGSALAIGRTLAAILENYQREDGSVIVPHALRDYVKADIIKPE
>NC_017161|1452831:1459020|1453542_1454379_+|WP_012964218.1|DBSCAN-SWA
MRIRIAHSPDSDDAFMFYPMVSGEIDTEGFQIEHVLADIETLNREAFKGTYEVSAISFHAYPYVADKYLVLPSGGSVGDGYGPIVVSKKPLDTLRGKRVAIPGKLTTAYLVLKLYEPDFCEEVVPFDQVMDKVERQEADAGLVIHEGQISYADRGLLKFVDLGQWWKEKTGLALPLGCNVVRKDLGEETIRKIERLMRRSVEYALSNVDKALEYARDYARDIKESQEKAFKFVSMYVNSRTVDYGEDGRQAVRLLLSLGRERGIINVDIPSTIFSDEV

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012964217.1|1452831_1453506_+	GMP synthase	M1PC73	Moumouvirus	2.6e-10	25.0
WP_012964218.1|1453542_1454379_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012964219.1|1454471_1454966_+	ADP-ribose-binding protein	G3MBI4	Bacillus_virus	1.7e-11	35.7
WP_012964220.1|1454952_1455822_+	ATP phosphoribosyltransferase regulatory subunit	A0A1V0S921	Catovirus	2.5e-13	27.4
WP_012964221.1|1455818_1456952_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	3.0e-99	48.6
WP_012964222.1|1456967_1458242_-|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	3.1e-97	44.8
WP_012964223.1|1458262_1458673_+	NUDIX hydrolase	G3MA14	Bacillus_virus	3.2e-11	38.3
WP_012964224.1|1458702_1459020_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	2.5e-08	36.7