CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_014664	Rhodomicrobium vannielii ATCC 17100, complete sequence	4 crisprs	cas3,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,csb2gr5,RT,csm3gr7,csx19,cas10,csm6,csx1,csx16,DEDDh	0	30	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_014664_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014664_1

1352288-1357227

TypeI

I-C

Consensus_repeat	Method
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CRISPRCasFinder
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CRT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	PILER-CR

74 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NC_014664_1

>merge|NC_014664|1|1352288-1357227|CRISPRCasFinder,CRT,PILER-CR
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCCGTGTTCGGCGTCGGATATAGGCGCAGCGCTCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTGGGTGCCGTCGATGTCATGTGGGAGGTGAAAAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTGCATCAACCTTTACAAGCTTTCGCAGCGTGCTCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGACGCCAAGCTCATGCAAGTGCAGGACACGGCCTGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCCTGAATGCGGAGCACCTTGCGGCTCTGCTTGTGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGTCAAACGTCGCCCATGTCGTCGGATCGCTCACAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACATTTCAAAGCCGTCATCCTCGCTCGTGTAAAACTGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACAACATTCAGGGTATGATCGAGCTCTAACTTGTCGCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACAGGCCAGAGCGCTTGGCCTCTGTCATCGATGGCGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGATGGGGATTAGTACCAAATCGGTGTCACATCGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCGCGACAGACAGGAAAAGACCTGTCAACAATGTCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCAGCCGGATACCCCGTCGCGGCGCTACTGGCGGTGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACAGTTTAAAAAGAGTGCTTGATACTGTTTGCGAAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCCTCGAATGTCGCGCCATCACGCGTGAATGAGAAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTGATACCGCCGCTCATGCCGCCAGCCTCATGACGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACATCAAACACAAGGCCCCGAACCGCGCCGCTTTCCAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACAATGCTCCGCAGTCGTGTAAAGCTGACGATACAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCGTGAAACATGGCGCGCGGTTGAGCAAGCGCTATCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACACGCATGAACCAGTCGGCCACAAGACGATCGCGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACAAGCTGCTGGTGGGCGGAAAGACCGGCGCCTTCGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCTAACTCCAGGACCCGTAGCGGCCAAATAAAACGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCCGCTCCAAAGCTACCATCTCAGCCGCCCGTTTCATGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACATGGCAGGCGTCACGACGCGCATGCGCGAAGGCTCAGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCTACCCCTTTCCTCGTAAAACGCGTACCCGTGATGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTGGTCGACCGGGATAACGTGCGTTGGGGGCTGGACGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCCGTTGTAGTTGCTGTCCAGCACTTCCCCCAGGTGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACACGCTTGGCCTCCTGATCCTCTGCCGCGACGGCTCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCTTTGGGCCTGCTCTCCGTCTATGAGCACTATAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGGCGACATCGGGCAACTCGACCGTCTGCCCGGCGGTCGCTCCCCGTGCGGGAGCGTGGATTGAAACATCGCGCGTAACAGTCACACGGTCAGGGTGTCGCGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCCCTTGGATCGCGATTTTCTCATGTGGCGGATAATGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTCTTTGGAAATGACGCAATCCGCCCTCGCCGCCAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTCTTTGGAAATGACGCAATCCGCCCTCGCCGCCAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCTATCGCCGCATAGTAGGCCGCGATTTTGTCCGCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACATCAGTTTGCCCTCCGCTTGGCTTCTTCTTCTCGCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCACGGCATGCGCGGGAAATCACGCTGCACCTGTGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACACGCCAAGCTGATCGAACGGATAGGCCTCGCCACGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGACGCGAGCATAACACGCGCCGCCTTGGCGCGGGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCTCGCGATGGCCGCGATTAAACAGGCGTTGCAATGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGGCGGTTTGCGCGGCATCGCCTGTATAGGCCAGAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCACTGTTTACGAGTGTGCTATAGATCCGACACTGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACACGTTGAAGGTCTTGTCTGCGTCTTCGCCGTCGTGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCAGTCGTGGCGATGTACATGGGCACCACCACAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTCCGACAAGGCGCGCGCCGTCATCGTTGTGCGCTCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGGCAGATCGTCAAGATTTAAGTCTTCGCTCATTGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTTTTCCCCGAGCGGAAACTTGCATTGGCCGTGGAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCGCGTCATGAGGCGCGGCGCGTTATCGCCGCCACCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGTCGCCTGTACGCTCGTGAGCAACTTCTGAGCCGCAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACACCAGAAGAACCGCGCCGGACGCCGCGCCGTCGCGCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTAACCGTTAAATCCGCGAGAAAACCCGGCGGCCGCGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTACCGAGGATACGGTTTAGCTCTTGATGAGGCATGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTTTTATGGAGGGAGACCGATGGCTTTGAGCCCGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCACGCAAGTGTGCGGCTACCGGTGGCGTCCTGTGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCACTTCAGCGGCTGCAAGAGGATGTGCTCAGGCGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACAACAGCCTGTCGCCATAGAGGTTGAGCAGCCGCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCTCTGCGAGTACAAGGGCAATAGAGCGGCGGCGGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACATCAGGGCGATTGCGTCACTCAGCGCGTTGTGCGGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTGTCAACATCACGCAGGCCCCGGCAGTTGCCGGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTTGACCTGCGGATTGAAGATGGACCGAGCCACGACGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTGCATTCAGCGCGGCAAGCTCCTGAGGCGACAAGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCAGGCGTATACGTCACCTGTGCAGGCGCGGCGGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCCCTTGGCCATCTCACTGGCGACCGACGTCACGAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCGGTCACACGGTACAAAGGGCTGGCGCAAGGGTTGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGGCAGTTCAGCCGCGACCGTCCGCTGGAAGGCGGCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCGATCATCCTTGACATCATCGCCAAATCTCTTGGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTTTCTTGTGTCGGCTCAATTGCCGTTAGATAGCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACAACTACAGCGTGGCAATGAGCGTGACTGAATATGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTGTACTTGAGCACAGGTTTTGTGGCGAAACCGCCAGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACACCAGACGACGCGACAACATACGCGCGCGTGCTTGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCAGCACTCATGCGAGCCAGCTTGAACCGCTGCGGTCGCTCCCCTTGCGGGAGCGTGGATCGAAACACCAGACGACGCGACAACATACGCGCGCGTGCTTGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGCAGCACTCATGCGAGCCAGCTTGAACCGCTGCGGTCGCTCCCCTTGCGGGAGCGTGGATCGAAACGTGATGATGAAACCCCTTGGTGCGCGACGTTCGTGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCCGTTTTAGCGATGTTGATTGACGGCGCTTTAGCTGTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC

>NC_014664|1|1|1352288-1357227|CRISPRCasFinder
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCGTGTTCGGCGTCGGATATAGGCGCAGCGCTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGGGTGCCGTCGATGTCATGTGGGAGGTGAAAA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGCATCAACCTTTACAAGCTTTCGCAGCGTGCTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GACGCCAAGCTCATGCAAGTGCAGGACACGGCCTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCTGAATGCGGAGCACCTTGCGGCTCTGCTTGTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GTCAAACGTCGCCCATGTCGTCGGATCGCTCACA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATTTCAAAGCCGTCATCCTCGCTCGTGTAAAACT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AACATTCAGGGTATGATCGAGCTCTAACTTGTCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AGGCCAGAGCGCTTGGCCTCTGTCATCGATGGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GATGGGGATTAGTACCAAATCGGTGTCACATCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCGCGACAGACAGGAAAAGACCTGTCAACAATGTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGCCGGATACCCCGTCGCGGCGCTACTGGCGGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AGTTTAAAAAGAGTGCTTGATACTGTTTGCGAA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCTCGAATGTCGCGCCATCACGCGTGAATGAGAA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGATACCGCCGCTCATGCCGCCAGCCTCATGACG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCAAACACAAGGCCCCGAACCGCGCCGCTTTCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AATGCTCCGCAGTCGTGTAAAGCTGACGATACA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CGTGAAACATGGCGCGCGGTTGAGCAAGCGCTATC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGCATGAACCAGTCGGCCACAAGACGATCGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AAGCTGCTGGTGGGCGGAAAGACCGGCGCCTTCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCTAACTCCAGGACCCGTAGCGGCCAAATAAAAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCGCTCCAAAGCTACCATCTCAGCCGCCCGTTTCAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATGGCAGGCGTCACGACGCGCATGCGCGAAGGCTCAG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTACCCCTTTCCTCGTAAAACGCGTACCCGTGAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGGTCGACCGGGATAACGTGCGTTGGGGGCTGGAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCGTTGTAGTTGCTGTCCAGCACTTCCCCCAGGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGCTTGGCCTCCTGATCCTCTGCCGCGACGGCTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCTTTGGGCCTGCTCTCCGTCTATGAGCACTATA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCGACATCGGGCAACTCGACCGTCTGCCCGGCG
GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC	ATCGCGCGTAACAGTCACACGGTCAGGGTGTCGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCCTTGGATCGCGATTTTCTCATGTGGCGGATAAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TCTTTGGAAATGACGCAATCCGCCCTCGCCGCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TCTTTGGAAATGACGCAATCCGCCCTCGCCGCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCTATCGCCGCATAGTAGGCCGCGATTTTGTCCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCAGTTTGCCCTCCGCTTGGCTTCTTCTTCTCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CACGGCATGCGCGGGAAATCACGCTGCACCTGTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGCCAAGCTGATCGAACGGATAGGCCTCGCCAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GACGCGAGCATAACACGCGCCGCCTTGGCGCGGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTCGCGATGGCCGCGATTAAACAGGCGTTGCAAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCGGTTTGCGCGGCATCGCCTGTATAGGCCAGA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCACTGTTTACGAGTGTGCTATAGATCCGACACT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGTTGAAGGTCTTGTCTGCGTCTTCGCCGTCGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGTCGTGGCGATGTACATGGGCACCACCACA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TCCGACAAGGCGCGCGCCGTCATCGTTGTGCGCTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCAGATCGTCAAGATTTAAGTCTTCGCTCATTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTTTCCCCGAGCGGAAACTTGCATTGGCCGTGGA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCGCGTCATGAGGCGCGGCGCGTTATCGCCGCCACC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GTCGCCTGTACGCTCGTGAGCAACTTCTGAGCCGCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACCAGAAGAACCGCGCCGGACGCCGCGCCGTCGCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TAACCGTTAAATCCGCGAGAAAACCCGGCGGCCGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TACCGAGGATACGGTTTAGCTCTTGATGAGGCATG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTTTATGGAGGGAGACCGATGGCTTTGAGCCCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CACGCAAGTGTGCGGCTACCGGTGGCGTCCTGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CACTTCAGCGGCTGCAAGAGGATGTGCTCAGGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AACAGCCTGTCGCCATAGAGGTTGAGCAGCCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTCTGCGAGTACAAGGGCAATAGAGCGGCGGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCAGGGCGATTGCGTCACTCAGCGCGTTGTGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGTCAACATCACGCAGGCCCCGGCAGTTGCCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTGACCTGCGGATTGAAGATGGACCGAGCCACGAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGCATTCAGCGCGGCAAGCTCCTGAGGCGACAAG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGGCGTATACGTCACCTGTGCAGGCGCGGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCCTTGGCCATCTCACTGGCGACCGACGTCACGA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CGGTCACACGGTACAAAGGGCTGGCGCAAGGGTT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCAGTTCAGCCGCGACCGTCCGCTGGAAGGCGGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CGATCATCCTTGACATCATCGCCAAATCTCTTGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTTCTTGTGTCGGCTCAATTGCCGTTAGATAGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AACTACAGCGTGGCAATGAGCGTGACTGAATAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGTACTTGAGCACAGGTTTTGTGGCGAAACCGCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACCAGACGACGCGACAACATACGCGCGCGTGCTT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGCACTCATGCGAGCCAGCTTGAACCGCTGCG
GTCGCTCCCCTTGCGGGAGCGTGGATCGAAAC	ACCAGACGACGCGACAACATACGCGCGCGTGCTT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGCACTCATGCGAGCCAGCTTGAACCGCTGCG
GTCGCTCCCCTTGCGGGAGCGTGGATCGAAAC	GTGATGATGAAACCCCTTGGTGCGCGACGTTCGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCGTTTTAGCGATGTTGATTGACGGCGCTTTAGCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC

>NC_014664|1|1|1352288-1357227|CRT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCGTGTTCGGCGTCGGATATAGGCGCAGCGCTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGGGTGCCGTCGATGTCATGTGGGAGGTGAAAA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGCATCAACCTTTACAAGCTTTCGCAGCGTGCTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GACGCCAAGCTCATGCAAGTGCAGGACACGGCCTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCTGAATGCGGAGCACCTTGCGGCTCTGCTTGTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GTCAAACGTCGCCCATGTCGTCGGATCGCTCACA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATTTCAAAGCCGTCATCCTCGCTCGTGTAAAACT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AACATTCAGGGTATGATCGAGCTCTAACTTGTCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AGGCCAGAGCGCTTGGCCTCTGTCATCGATGGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GATGGGGATTAGTACCAAATCGGTGTCACATCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCGCGACAGACAGGAAAAGACCTGTCAACAATGTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGCCGGATACCCCGTCGCGGCGCTACTGGCGGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AGTTTAAAAAGAGTGCTTGATACTGTTTGCGAA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCTCGAATGTCGCGCCATCACGCGTGAATGAGAA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGATACCGCCGCTCATGCCGCCAGCCTCATGACG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCAAACACAAGGCCCCGAACCGCGCCGCTTTCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AATGCTCCGCAGTCGTGTAAAGCTGACGATACA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CGTGAAACATGGCGCGCGGTTGAGCAAGCGCTATC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGCATGAACCAGTCGGCCACAAGACGATCGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AAGCTGCTGGTGGGCGGAAAGACCGGCGCCTTCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCTAACTCCAGGACCCGTAGCGGCCAAATAAAAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCGCTCCAAAGCTACCATCTCAGCCGCCCGTTTCAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATGGCAGGCGTCACGACGCGCATGCGCGAAGGCTCAG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTACCCCTTTCCTCGTAAAACGCGTACCCGTGAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGGTCGACCGGGATAACGTGCGTTGGGGGCTGGAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCGTTGTAGTTGCTGTCCAGCACTTCCCCCAGGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGCTTGGCCTCCTGATCCTCTGCCGCGACGGCTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCTTTGGGCCTGCTCTCCGTCTATGAGCACTATA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCGACATCGGGCAACTCGACCGTCTGCCCGGCG
GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC	ATCGCGCGTAACAGTCACACGGTCAGGGTGTCGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCCTTGGATCGCGATTTTCTCATGTGGCGGATAAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TCTTTGGAAATGACGCAATCCGCCCTCGCCGCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TCTTTGGAAATGACGCAATCCGCCCTCGCCGCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCTATCGCCGCATAGTAGGCCGCGATTTTGTCCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCAGTTTGCCCTCCGCTTGGCTTCTTCTTCTCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CACGGCATGCGCGGGAAATCACGCTGCACCTGTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGCCAAGCTGATCGAACGGATAGGCCTCGCCAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GACGCGAGCATAACACGCGCCGCCTTGGCGCGGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTCGCGATGGCCGCGATTAAACAGGCGTTGCAAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCGGTTTGCGCGGCATCGCCTGTATAGGCCAGA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCACTGTTTACGAGTGTGCTATAGATCCGACACT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGTTGAAGGTCTTGTCTGCGTCTTCGCCGTCGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGTCGTGGCGATGTACATGGGCACCACCACA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TCCGACAAGGCGCGCGCCGTCATCGTTGTGCGCTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCAGATCGTCAAGATTTAAGTCTTCGCTCATTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTTTCCCCGAGCGGAAACTTGCATTGGCCGTGGA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCGCGTCATGAGGCGCGGCGCGTTATCGCCGCCACC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GTCGCCTGTACGCTCGTGAGCAACTTCTGAGCCGCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACCAGAAGAACCGCGCCGGACGCCGCGCCGTCGCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TAACCGTTAAATCCGCGAGAAAACCCGGCGGCCGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TACCGAGGATACGGTTTAGCTCTTGATGAGGCATG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTTTATGGAGGGAGACCGATGGCTTTGAGCCCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CACGCAAGTGTGCGGCTACCGGTGGCGTCCTGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CACTTCAGCGGCTGCAAGAGGATGTGCTCAGGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AACAGCCTGTCGCCATAGAGGTTGAGCAGCCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTCTGCGAGTACAAGGGCAATAGAGCGGCGGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCAGGGCGATTGCGTCACTCAGCGCGTTGTGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGTCAACATCACGCAGGCCCCGGCAGTTGCCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTGACCTGCGGATTGAAGATGGACCGAGCCACGAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGCATTCAGCGCGGCAAGCTCCTGAGGCGACAAG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGGCGTATACGTCACCTGTGCAGGCGCGGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCCTTGGCCATCTCACTGGCGACCGACGTCACGA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CGGTCACACGGTACAAAGGGCTGGCGCAAGGGTT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCAGTTCAGCCGCGACCGTCCGCTGGAAGGCGGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CGATCATCCTTGACATCATCGCCAAATCTCTTGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTTCTTGTGTCGGCTCAATTGCCGTTAGATAGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AACTACAGCGTGGCAATGAGCGTGACTGAATAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGTACTTGAGCACAGGTTTTGTGGCGAAACCGCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACCAGACGACGCGACAACATACGCGCGCGTGCTT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGCACTCATGCGAGCCAGCTTGAACCGCTGCG
GTCGCTCCCCTTGCGGGAGCGTGGATCGAAAC	ACCAGACGACGCGACAACATACGCGCGCGTGCTT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGCACTCATGCGAGCCAGCTTGAACCGCTGCG
GTCGCTCCCCTTGCGGGAGCGTGGATCGAAAC	GTGATGATGAAACCCCTTGGTGCGCGACGTTCGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCGTTTTAGCGATGTTGATTGACGGCGCTTTAGCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC

>NC_014664|1|1|1352485-1357227|PILER-CR
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GACGCCAAGCTCATGCAAGTGCAGGACACGGCCTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCTGAATGCGGAGCACCTTGCGGCTCTGCTTGTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GTCAAACGTCGCCCATGTCGTCGGATCGCTCACA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATTTCAAAGCCGTCATCCTCGCTCGTGTAAAACT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AACATTCAGGGTATGATCGAGCTCTAACTTGTCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AGGCCAGAGCGCTTGGCCTCTGTCATCGATGGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GATGGGGATTAGTACCAAATCGGTGTCACATCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCGCGACAGACAGGAAAAGACCTGTCAACAATGTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGCCGGATACCCCGTCGCGGCGCTACTGGCGGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AGTTTAAAAAGAGTGCTTGATACTGTTTGCGAA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCTCGAATGTCGCGCCATCACGCGTGAATGAGAA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGATACCGCCGCTCATGCCGCCAGCCTCATGACG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCAAACACAAGGCCCCGAACCGCGCCGCTTTCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AATGCTCCGCAGTCGTGTAAAGCTGACGATACA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CGTGAAACATGGCGCGCGGTTGAGCAAGCGCTATC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGCATGAACCAGTCGGCCACAAGACGATCGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AAGCTGCTGGTGGGCGGAAAGACCGGCGCCTTCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCTAACTCCAGGACCCGTAGCGGCCAAATAAAAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCGCTCCAAAGCTACCATCTCAGCCGCCCGTTTCAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATGGCAGGCGTCACGACGCGCATGCGCGAAGGCTCAG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTACCCCTTTCCTCGTAAAACGCGTACCCGTGAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGGTCGACCGGGATAACGTGCGTTGGGGGCTGGAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCGTTGTAGTTGCTGTCCAGCACTTCCCCCAGGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGCTTGGCCTCCTGATCCTCTGCCGCGACGGCTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCTTTGGGCCTGCTCTCCGTCTATGAGCACTATA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCGACATCGGGCAACTCGACCGTCTGCCCGGCG
GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC	ATCGCGCGTAACAGTCACACGGTCAGGGTGTCGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCCTTGGATCGCGATTTTCTCATGTGGCGGATAAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TCTTTGGAAATGACGCAATCCGCCCTCGCCGCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TCTTTGGAAATGACGCAATCCGCCCTCGCCGCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCTATCGCCGCATAGTAGGCCGCGATTTTGTCCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCAGTTTGCCCTCCGCTTGGCTTCTTCTTCTCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CACGGCATGCGCGGGAAATCACGCTGCACCTGTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGCCAAGCTGATCGAACGGATAGGCCTCGCCAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GACGCGAGCATAACACGCGCCGCCTTGGCGCGGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTCGCGATGGCCGCGATTAAACAGGCGTTGCAAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCGGTTTGCGCGGCATCGCCTGTATAGGCCAGA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCACTGTTTACGAGTGTGCTATAGATCCGACACT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACGTTGAAGGTCTTGTCTGCGTCTTCGCCGTCGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGTCGTGGCGATGTACATGGGCACCACCACA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TCCGACAAGGCGCGCGCCGTCATCGTTGTGCGCTC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCAGATCGTCAAGATTTAAGTCTTCGCTCATTG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTTTCCCCGAGCGGAAACTTGCATTGGCCGTGGA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCGCGTCATGAGGCGCGGCGCGTTATCGCCGCCACC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GTCGCCTGTACGCTCGTGAGCAACTTCTGAGCCGCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACCAGAAGAACCGCGCCGGACGCCGCGCCGTCGCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TAACCGTTAAATCCGCGAGAAAACCCGGCGGCCGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TACCGAGGATACGGTTTAGCTCTTGATGAGGCATG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTTTATGGAGGGAGACCGATGGCTTTGAGCCCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CACGCAAGTGTGCGGCTACCGGTGGCGTCCTGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CACTTCAGCGGCTGCAAGAGGATGTGCTCAGGCG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AACAGCCTGTCGCCATAGAGGTTGAGCAGCCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTCTGCGAGTACAAGGGCAATAGAGCGGCGGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCAGGGCGATTGCGTCACTCAGCGCGTTGTGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGTCAACATCACGCAGGCCCCGGCAGTTGCCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTGACCTGCGGATTGAAGATGGACCGAGCCACGAC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGCATTCAGCGCGGCAAGCTCCTGAGGCGACAAG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGGCGTATACGTCACCTGTGCAGGCGCGGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCCCTTGGCCATCTCACTGGCGACCGACGTCACGA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CGGTCACACGGTACAAAGGGCTGGCGCAAGGGTT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GGCAGTTCAGCCGCGACCGTCCGCTGGAAGGCGGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CGATCATCCTTGACATCATCGCCAAATCTCTTGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TTTCTTGTGTCGGCTCAATTGCCGTTAGATAGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	AACTACAGCGTGGCAATGAGCGTGACTGAATAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGTACTTGAGCACAGGTTTTGTGGCGAAACCGCCA
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACCAGACGACGCGACAACATACGCGCGCGTGCTT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGCACTCATGCGAGCCAGCTTGAACCGCTGCG
GTCGCTCCCCTTGCGGGAGCGTGGATCGAAAC	ACCAGACGACGCGACAACATACGCGCGCGTGCTT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GCAGCACTCATGCGAGCCAGCTTGAACCGCTGCG
GTCGCTCCCCTTGCGGGAGCGTGGATCGAAAC	GTGATGATGAAACCCCTTGGTGCGCGACGTTCGT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCGTTTTAGCGATGTTGATTGACGGCGCTTTAGCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014664.1\|WP_155942355.1\|1339927_1340440_-\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_169309523.1\|1364036_1365113_-\|DUF2218-domain-containing-protein	unknown	unknown	gnl\|CDD\|99790
NC_014664.1\|WP_081449403.1\|1349990_1350731_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NC_014664.1\|WP_013418885.1\|1339152_1339650_+\|winged-helix-DNA-binding-protein	unknown	unknown	gnl\|CDD\|379200
NC_014664.1\|WP_013418902.1\|1366683_1369551_-\|secretin-and-TonB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|198033
NC_014664.1\|WP_013418904.1\|1370521_1370683_-\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013418901.1\|1365464_1366670_-\|cytochrome-c-peroxidase	unknown	unknown	gnl\|CDD\|224771
NC_014664.1\|WP_013418891.1\|1349103_1350063_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NC_014664.1\|WP_013418893.1\|1350727_1351762_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_014664.1\|WP_013418888.1\|1344395_1346627_+\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_014664.1\|WP_013418896.1\|1358320_1359334_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NC_014664.1\|WP_013418894.1\|1351771_1352062_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_014664.1\|WP_013418897.1\|1359330_1360389_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NC_014664.1\|WP_013418889.1\|1346642_1347341_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NC_014664.1\|WP_013418890.1\|1347337_1349107_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NC_014664.1\|WP_013418895.1\|1357529_1358324_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NC_014664.1\|WP_013418899.1\|1361592_1363680_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NC_014664.1\|WP_013418887.1\|1341026_1343375_+\|bifunctional-DNA-primase/polymerase	unknown	unknown	gnl\|CDD\|378030
NC_014664.1\|WP_013418903.1\|1369717_1370539_+\|HEPN-domain-containing-protein	unknown	unknown	unknown
NC_014664.1\|WP_013418898.1\|1360523_1361474_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223687

Protein	Function_ID	Function_description	E-value
NC_014664.1\|WP_013418899.1\|1361592_1363680_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.74037e-47
NC_014664.1\|WP_169309523.1\|1364036_1365113_-\|DUF2218-domain-containing-protein	gnl\|CDD\|99790	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in a variety of organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one-electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and two electron carriers. FNR has a strong preference for NADP(H) vs NAD(H).	5.58352e-86
NC_014664.1\|WP_081449403.1\|1349990_1350731_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.66599e-38
NC_014664.1\|WP_013418885.1\|1339152_1339650_+\|winged-helix-DNA-binding-protein	gnl\|CDD\|379200	pfam13463, HTH_27, Winged helix DNA-binding domain.	6.74193e-11
NC_014664.1\|WP_013418902.1\|1366683_1369551_-\|secretin-and-TonB-N-terminal-domain-containing-protein	gnl\|CDD\|198033	smart00965, STN, Secretin and TonB N terminus short domain. This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.	7.74428e-07
NC_014664.1\|WP_013418901.1\|1365464_1366670_-\|cytochrome-c-peroxidase	gnl\|CDD\|224771	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism].	4.40106e-75
NC_014664.1\|WP_013418891.1\|1349103_1350063_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	3.38098e-145
NC_014664.1\|WP_013418893.1\|1350727_1351762_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_014664.1\|WP_013418888.1\|1344395_1346627_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.35488e-55
NC_014664.1\|WP_013418896.1\|1358320_1359334_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	3.01523e-61
NC_014664.1\|WP_013418894.1\|1351771_1352062_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.76485e-34
NC_014664.1\|WP_013418897.1\|1359330_1360389_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	3.5435e-57
NC_014664.1\|WP_013418889.1\|1346642_1347341_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	9.88691e-111
NC_014664.1\|WP_013418890.1\|1347337_1349107_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NC_014664.1\|WP_013418895.1\|1357529_1358324_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.81605e-102
NC_014664.1\|WP_013418887.1\|1341026_1343375_+\|bifunctional-DNA-primase/polymerase	gnl\|CDD\|378030	pfam08707, PriCT_2, Primase C terminal 2 (PriCT-2). This alpha helical domain is found at the C terminal of primases.	1.69191e-19
NC_014664.1\|WP_013418898.1\|1360523_1361474_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|223687	COG0614, FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism].	3.34983e-25

>NC_014664.1|WP_013418894.1|1351771_1352062_+|CRISPR-associated-endonuclease-Cas2
MLVLVTYDVNTIEGDGKARLRSVAKACRDFGQRVQFSVFEIEVDPAQWTRLKARLEAIIDPKHDSLRYYHLGANWRHKVEHVGAKPAADLGGTLIV
>NC_014664.1|WP_013418893.1|1350727_1351762_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTVYITTEGASLRKDGENLVAEVDGAERARVPFHMLSSLVLFGAIYISPALIGACAASGITIVLLDRAGRFQARVEGPVSGNVLLRRAQYRVSDAPAEIVRSLVVGKIANQRAVLMRALRDHGDVFAVERRAAIEGVVDRLAHIVARVERKDDGADAMRGSEGEAAHLYFSVFGDLILSPSPDLRWRGRSRRPPLDPINALLSFLYALLTHDCRSAAEAIGLDPAVGFLHRDRPGRPSLALDLMEELRPVLADRLALSLINRQQLQASDFVTEDSGAVRLKDDARKVVLTAWQERKKDERVHPFLDEKAPLGLVPYLQTQMLARHLRGDIDAYPPWFWK
>NC_014664.1|WP_081449403.1|1349990_1350731_+|CRISPR-associated-protein-Cas4
MHRLQSGDRSHQSARRCRNHRPAVTENDGSGSLMEEREPIPLSALQHAVYCLRQAALIHLERLWEENRFTAEGHVLHVAADKPGGRRVRGVRRVTALAIGSSRLGIAGVADLVEFRAEGDHEIAFPVEYKRGKPKPHRADEVQLCAQALCLEDMTGHAVPIGALFYAETKRRVEVSFDNDLRALTLSTIEALRDVFASRLTPLPTQQRSRCRACSLAGLCQPEIAGRTVRDWRRRTVDRMLAGESR
>NC_014664.1|WP_013418891.1|1349103_1350063_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTAIANRYDFVLLFDVTRGNPNGDPDAGNMPRIDPETNFGLVSDVSLKRKIRNYVELAHRGEEGRHIYVQESSILNEQHRKAYKAVAPYKDDPKTDKAAKLNPRTDDEAHALTAWMCANFYDVRTFGAVMSTGINCGQVRGPVQIAFAQSIEPIIAQEISITRMAATNEAEKKQKAEGDDSVDRTDNRTMGRKHIVPYGLYRAHGFISAKLAERTGFDEGDLDLLFTALAEMFEHDHSAARGEMASRKLIVFKHNTALGKASAHALFERVRVGRNIDGEFRDVDDRRIDNAPPARKFTDYKVEIDRTNLPDGVEIIDRL
>NC_014664.1|WP_013418890.1|1347337_1349107_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSILASLAKAYGRLPDAPPFGFSSEKIGFLISLNEDGTVACPPVDLRQDDKKRTPRTVAVPASFKRPGITPRSFFLWDNSAYALGVTGAESKDAASRHKVFCECHLGALRDTTDPGLKALVIFLKTWFPRRFDEYGWPEEMKDQNIIFCLEADRRANIWLHDRPAAKALCARLSAEGAKSEAVCLISGQRAPVARLHPAIKGVWGAQSAGASIVSFNLDAFSSYGHEQGDNAPVSEAATFAYTTALNRFLEKDSGHRIQIGDASVVFWADASAAKAAEAENIFAGFWDDSGDEPLGVDEGTQAQIVGARLKQIRNGEPLRNVAPDLAEGVRFYVLALAPNAARLSIRFYFEDDFGAIAANYQRFLADMQIEPPPRDGQPALWKYLAETAVLKKRENVPPNLAGEWMRAILGGTRYPQTLLATVLMRLRADKDVNALRVAILKALLIRNNNRKDTPVALKPDYPSKGYQLGRLFAVYERIQSDALGAKVNATIKDKFYGSASAQPRKVFGLLEKGSANHLSKIGKQSPGRKVNLEKLVGEIMGAMDPSADPFPNALSAEDQALFGLGYYHQRNEFFKSTKNGTPVEETAP
>NC_014664.1|WP_013418889.1|1346642_1347341_+|type-I-C-CRISPR-associated-protein-Cas5
MPYGIRLLVSGERACFTRPEMKVERVSYDVMTPSAARGILEAIHWKPAIRWIVDEIHVLKTIRFQSIRRNEVGHKVPAGRIKQAMNRGDLGDLQIVVDEDRQRRAATVLVDVAYVIATHFELTERAGPDDNEGKHLDIFNRRAERGQCFHQPCLGTREFDARFELLSPDAPTPLAASEHRTSALGFGAPRDLGFMLFDIDHAAPGRPSLFFRAELRDGVMTVPHPDAPEVRR
>NC_014664.1|WP_013418888.1|1344395_1346627_+|CRISPR-associated-endonuclease-Cas3''
MFFAHSSKDASKCDWQSLAQHLSEVAALAAQFSAPWGGDRAARIAGLLHDLGKYHPDFQRRLEGSDIRVEHSIAGAAYILTNAASGDKAMAELIAHAVAGHHAGLPDRIGDGSSLNQRVQDADPSRLNPAWRGELAIDLGNLNPAFSFKSKEATEFGLSFLGRMLFSCLVDADFKDTEAFYNRIEGRKADRDWPALRDVLSALSERLDAELSRKAAVGSDTHVNHLRQQVLTHVRGKANEAPSLFTLTVPTGGGKTLTSLAFALDHARAHGMRRIIYAIPFTSVIDQTADIFRKLFGDDIVLEHHSAIDEEKVRNLSSRDKLRLAMEDWAAPVVVTTTVQLFESLFSARPSRCRKLHNIAGSVIVLDEAQTLPRHLLIPIMRAIEELAANYGCTVVLCTATQPALGAREGFPGLPLDGRELAPDPAGLARELRRTRLDFAGPKDNAALVDALGRERQTLVIVNSRAHALDLYRDAVKAGLDGVLHLTTRQYAVNRREILKYVRARLENDLSCRLIATSLVEAGVDVDFPRVFRAEAGLDQIAQAAGRCNREGRRDPDASVVTVFEAVGYSVPSEIKGLIGDFGRIRHKHADLFAPAAIQDYFEEVFWRMGDKLDGKNILKQFIVDRTGTHFQYRTVGEKFRMIESGLLPVIVPHDDDAAKRAVADLGNAAIPSGKLARQLQGYIVQVPPDARALLMANRHVALKAEDIRGDQFAVLQAPHLYTKETGLLWEDGSLLGNDQTFI
>NC_014664.1|WP_013418887.1|1341026_1343375_+|bifunctional-DNA-primase/polymerase
MIEEVKPLVEAGFSVHLLRPKSKIPANDGWSEAPVYTFDQLRKLYRDGQNVGIRLGKPSKVEGLYLHAIDLDIRVPEAKSEALDRLDELISDGDLKELPCVQSGSGGASRHFYFLTEDAFRSKKLAHSKHKFTGDDGKEHWEWEIELFGTGKQVVLPPSIHPDTGKAYRWVLQPDLKRGIPRISADLIDELVGGDESTGFYENSEPLNLTINEARDYLDAIPDWADDRDSWVRVGMALKHEFADDKALIKEAWELFDEWSRRGYGYNRAKNLAQWRGFTFDREELVTMRSIVAEANDRALYETIEELDDEDEERPPAPPSAKVLMSMFDDLDGPPTPPRDQDADPYAILKREGVPDHVLSIPGVLQEVVDYYNATAIKSQPQFAVQAALAFGSVVLGRHWSTNRKNFTSLYFLNLAPTAGGKEHAKRVIEEFLTEAGLDTLTGPKNYASEAGVFSTLLTKPRHICITDEFGRYLSSARGGAGNANKSEAQSALMEVFGRLDGTWQTNGYSTRGMTKEQADAQNNAKVVRPALTLLGMTTPQSFYDALGQKDILDGFLNRFLIVESPLGRQSSREVDGSSLPKRVVRWARQKAWEIGGDDDDLEGMRAMVEPSFAPEPILVPFSKACMPILAEMEQAVSREMDRLDACGMAELYGRTREIAMRMALIVAVSDGCDVIKPRHVEWARDYVFFYQARMAKLFEGNIGKTDIEKACDAVCEYLETCGDDGAPEHQISRQRRKKFGKLSTRERDEVFALLLRDRRIRVTDRTAKRGSKKPWYALVKS
>NC_014664.1|WP_155942355.1|1339927_1340440_-|hypothetical-protein
MKALAELLSVDYGWLAFGIRPELDVEKRTVRVLAESAAANLVAGFIQLAGGHCAFPEADDPNSFVDVYAILGNRQRSLAVSLAKPQENGKLRFSVTNEYQRCMVIGAVQTGIGSIDMYLIPPQLIERHGVLRGPSTDIEVEEKSKGILIGGVTLSKIVDFKSDFARSLAN
>NC_014664.1|WP_013418885.1|1339152_1339650_+|winged-helix-DNA-binding-protein
MIADFVRVQPDDQSLKSNYLVTLRMIERLHRLLLDLIKDEFERVGRTDVNSVQALLLFNIGDVELTAGELKTRGLYLGSNVSYNLKKLVESGYIHHQRSRTDKRSVRVKLTDKGKAISEMVNRLLERQLNMLEKVGGVSVPDLKHFNQISVKLERFWGDQIRYQL
>NC_014664.1|WP_013418895.1|1357529_1358324_+|ABC-transporter-ATP-binding-protein
MPVLRVTNVTAGYGRLVVLHALSANFGRGRVTALVGPNGCGKSTLLKAIMGFLPASGGEILIEGQPIRLIGRKALAKRIAYLPQECQCPDYMTLGELIELAGYSRYSLVGGPSARDRQLFAEILDLVGLADKAGCQVNSLSGGQRQRAWIAMVLAQEADVILMDEPVNHLDMKYQYAVLGLVRELSARHGKTVIVVLHDLNLASAFADDVVMLRDGKVVAAGPAQEIMTAANVERAFDFEADIFSRDGRVVCLPRMSHAEAVAA
>NC_014664.1|WP_013418896.1|1358320_1359334_+|iron-ABC-transporter-permease
MTRRSRVLASTPLVLALAFLANISLGPGSISPADAIGALFRMEADSYEGAVVLYQRLPRALIAIYVGATMAVSGAVLQGLVRNPLASPSTLGMNAGATVFVVAGAYLFDFGMTAQGIAALVGALFGFFACVAIARLAGGSADPRGLALILSGALVSILFICIANAFLLSDPARRMDFLGWVTGNINHVYGDRLYAFWWIGAAALVLLAALSRSLTLILLGHEKAASAGVRVDLVSNLAIGATVLASGSAVAICGPIGFVGLVVPHILRPLVGSNLSALLPACMVTGASVCLLADLCARAALHPYVLHTGVLMDLLGGLVFIVIVRRFYLSGSARGLA
>NC_014664.1|WP_013418897.1|1359330_1360389_+|iron-ABC-transporter-permease
MRRERATDGKAVFRFSTGLEIPTGNLLAASGLLVAAILLAALSTGLGRTDAGISDLVRLFFGREMTDEQVYALWTVRLPRIVMGFMAGWCVALAGAILQSIARNPLADPGLFGLSQGAMTMIMLLAVIAPGAPREFVAFAAMGGGLGVALLLIWLVGGERSSGLSILLMGIAIQTVLSSVDALLLLYTPPETSYALSDWIAGSLFGASWPGIASFAVVFVASLVGIFFAGRALQAYDLGSEMAMALGEPVGRSRPVFLVFAVMLAASAVTAVGPLTFLGVLAPHLAGFISPAVGRPRLLLSGLMGGILVVAADALARSLLGNLPLPIGLSLTLIGVPLFIVTLSVSSRRRRG
>NC_014664.1|WP_013418898.1|1360523_1361474_-|ABC-transporter-substrate-binding-protein
MRLPILFALVFAINTAAFAGERTVTDDVGRTVTIPDEPKRIVVMHEPLLGVPLMDLGVSVVGGYGRTDDGKFVSIDFIDTVLGMGLPKPRGIGPFGQVDLERLRALNPDLIIGMEIDVDKVAQLSTVAPVYLQKVSNGKTRGIRVEEELARLLGRQQAFAERMAIYRARLETVRKVLPTDPTGKTYLAVFLTDQLNAVGDMSGAIQAIEDLGYTPLKLPQSSASGMGSTLLAPMNPEVFARANPDLLIVMNTYIGARDEAGTRAALDRIVPGWDRFTKPVREGNVVFLDSSKVTTPTVASALHTLDAIEVWAKKRR
>NC_014664.1|WP_013418899.1|1361592_1363680_-|TonB-dependent-receptor
MLWGSRAAYAATMAFASTLVVVSASGQQAFAQEGTVALDTITVTGEKIERDIMETASSVSVISAEDLAKKQSAATVADAINDIPNVVYPGTVGAPIIRGQDTQGSNFGSTAFFGGTIPRATVNLDGHYSNFYELVYGGTSIWDVKSIEVFRGPQTTTQGANAIAGAIIVNTNDPTFNTEGAYQVEVGNHDKRRTSLMVNRPIIDNELAARFTLDYWSRSTFIDYTNPTFATGDNGVNFKTLNGRAKLLWTPTDIPGLTAKLTYAHTYNSRPTYEAASAPYEDLKNRTGSMPAYEQDTDSGVLDLSYDLGGEIKLFNQSQISSSHIARTIIPETLGAATIDQQNITNEARVTYGDVGSRLSGVTGVFIAHTTSEDWLNNRGISSFDDEKLNVGIYTESTYKLTDRWTLTGGLRYQRDNTQRWGSSAGFAPGQYLNFDETYDAWLPKVSLAYELIQDVTVGVLFNKGYTPGGVNLSFANSKYLTFDPETVNNYELFARAKMLDNKLTLTGNIFYADYSNAQRLQDDYLGSILYGAIVVNADSAEAYGLEVSGTYQLRDDFRIRAGTGLLHTRISEYTDAAGNAVNEGNKFGNAPGYTLSAGIDWDIIEKVKWSIDVRHTDGYYSADDNNPLYHVDNFTVANSRISYDWTDNTQLYAYVNNVFDERTPLWKYQDRSIGGVAANMLEPRMIGVGIKGKF
>NC_014664.1|WP_169309523.1|1364036_1365113_-|DUF2218-domain-containing-protein
MATVKDPIRVIESVCEHFSDHDAEVRREEAAYVVTFPFGTGYLSAEFDMISLRAEADEMLGLYYMRMALAGHVKELAGDPEPDIVWSGDGGEIMTPPNFRLIRVRAIRDITPHMRRIAFAGSDLARFASDEDLHMGLVIPQPGTTMVVPTIGKDGLLCWPEGMARPGIRRYTTRRCDPQSGTMEVDFVLHDDAGPGAAFAANCKPGDVVGVAGPFGSSVPQDRGWYLLAGDETALPAISRMLEFLPGTARGVALIEVADEACEVEIANRTGIELRWLHRNGEAPGTTTLLTDAVRSIEFPADPSSVYAWVGCEFDAFKAIRAHLRKERGLKKGQQLVVAYWRKGASDEEVAETPQRDD
>NC_014664.1|WP_013418901.1|1365464_1366670_-|cytochrome-c-peroxidase
MKHMLFSRRLFFGVAAAAVAVSFLIHTHEQDHKAEVVRTEAARFAALKAEAEQLVADFPADPDAQALGRVRMAYERARAAWPAPILLPDAKVAEFAPLEIRPKPSGIAIAKVELGRMLFEDPRLSVSGQIACQNCHNQELGWGDGLRSSFGHNRKRGKRNAPPLFSAAYRPALFWDGRVTKLEEQALGPMTNPIEMAVHDFSAVTARLGKDDIYRERFRSIYGSDQIDIAWVADAVAAFETTLERPTRFDRFLKSDTAALTDEQVWGMHLFRTKAGCMNCHSGPLLTDERYHNLGLSLLGRPLGDLGRQAVTGLEDDVGRFRTASLRHVSKTGPYMHNGLIPDLRRVVIFYEIGGGKTRPINDKQTTDDLMRAAAKTSPLVKKFNFTPAERQALIEFLKAL
>NC_014664.1|WP_013418902.1|1366683_1369551_-|secretin-and-TonB-N-terminal-domain-containing-protein
MSKARVRAKRAPRAIAACVAGVGFFFSTSFESVLAQSGQQSASRQISIPAQPLASALVAFSRQTGVAIFAPSSATSGKRSSSVGGNMRPDAALRTLLAGTGLSYTFTSATSAKVVAGGAVTPLNGSETLDEIVVEDGAGQQFFGTAPADTGTTVMSGDLLQVRKDGTGDANAILKNLPNVQYQNEAKKDGGDDDQSVIDLKPKEMSISGARVYENNFIIDGMPTNNVAGSVERYGDEDLSDGTPVADRIYGLHSQTVYVPAEFLDTATVMDSNVSAQYGNFQGGVVSYKLNEPAKDRLRTTVTTDYSTSDWAEYNLKTETKTNPNNVQQPDFIKKRGSLTVSGPVNDWLSILGQVSHEEALTHKDKQYRYYSQRAEEDSDKNFYRFKANADTRYGEFSAEVIYDTYRQLWESHTYRDFKMDIGKDTLTAKLENTYKIGDQAFAGISFGNVKLTSRMSYSGSETTDDASGNIARQMKQTEWSPAGANGKVVWTSTELSDWCRTDPTLKQATLCYDGAWGDSLQKQKQVSWSEAVTGDVFLGKFSFGTDYAYTDAQRMRPEDFIYYSQYTTAYTAKVSRFDCSKTSEECSKEQFSNIKTVWRAYDIDAQLHDFGSYAELDQTWRWFNVRAGARVSLDSYMHNLDIAPRLVATVTPFEDLSVSAGYNRYYNANSLAYAIRDQQPRGQAYIRAHESGTVSDSWTARVITGNYTNSASGLDTPFSDERTISVAGKEPLLDGSWRIRFLDRRSFDQYASDANGTTYTLTNNGKGFYESVTGEYLKRLNPLTIPHMDALAFNASFTWSRQRVSHNNYYVDDLIDDRIWYNGKSYSLGGFGAVLGNLDIPMRLQMGFTSKWFDDALSFDIFGNYNLAFRGIRDTEEKISIDGVTHDIYEDFDYSSRFTVDVASAYTFFKEGDTSFTVDGRIDNVFNETGNATATNARPWIIGRTVWVGAKATF
>NC_014664.1|WP_013418903.1|1369717_1370539_+|HEPN-domain-containing-protein
MTAPEAGPPVPFQPYGLVSLWDMLEIDAQAFVVAVESLNAIDAHLAHLDLSDDKIINDEDTIATIASLLLDLNKATDAIYAPVTEQALARLMELLVNKKCKETELSGKLSDIRQRLRDELNGTTFFVLEEVYADLYNGTIDYFGFDIGVTFSSQAEADIEEAGKCLALGRGTSCVFHLMRAMEAAVKVLGSKLGVTNTEKEWGKILSDLGRKIEDMPKGPSRDEWSACHVNLYHVKQAWRNSTMHPKETYTAEQAREVLLSVRIFMRQLATLV
>NC_014664.1|WP_013418904.1|1370521_1370683_-|hypothetical-protein
MPKKKEPDLTSEEQFKRFQEAAKEHEIEKRLPEIEKAFDKLSKPKKKTSDQCR

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Crispr_ID: NC_014664_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014664_2

1636014-1636645

Orphan

NA:I-C

Consensus_repeat	Method
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	PILER-CR
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CRISPRCasFinder
NNNNNNNNNNGTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CRT

9 spacers

The CRISPR arrays of NC_014664_2

>merge|NC_014664|2|1636014-1636645|PILER-CR,CRISPRCasFinder,CRT
GTCACTCCCCGTGCGGGAGCGTGGATCGAAACCCTCTCTCATATACTTGATAGCCAGTTGAACGCGGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGTGTACACCCTCGCCATCTTCGGATCATCCCAGCCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACACTAGACCAGAATAAAAGAAAGCCTCTGTTGCAATGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACATCTATACGTCGACGGACGGGGGCGCGACGTGGGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCTCGGCAAGCTCATCTCGGCCGATACGGTCGAGGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACCCCTTAATAGATCGGATGCAGCAACTTTTTTTAGTCGCTCCCCGTGGGGGAGCGTGGATCGAAACCCTTTCGTTGCACCCATTATCTCTAATAATTCGGCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACTGGTAGGATGGAGCCTCCGGCCAGAGGCGCAGCGCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAACGAGAAAGAGATTTGGCGCTTCATGTGACTTGCTCCCCGTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC

>NC_014664|2|2|1636014-1636645|PILER-CR
GTCACTCCCCGTGCGGGAGCGTGGATCGAAAC	CCTCTCTCATATACTTGATAGCCAGTTGAACGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GTGTACACCCTCGCCATCTTCGGATCATCCCAGCC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACTAGACCAGAATAAAAGAAAGCCTCTGTTGCAAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCTATACGTCGACGGACGGGGGCGCGACGTGGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTCGGCAAGCTCATCTCGGCCGATACGGTCGAG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCCTTAATAGATCGGATGCAGCAACTTTTTTTA
GTCGCTCCCCGTGGGGGAGCGTGGATCGAAAC	CCTTTCGTTGCACCCATTATCTCTAATAATTCGGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGGTAGGATGGAGCCTCCGGCCAGAGGCGCAGCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GAGAAAGAGATTTGGCGCTTCATGTGACTTGCTCCCC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC

>NC_014664|2|2|1636014-1636645|CRISPRCasFinder
GTCACTCCCCGTGCGGGAGCGTGGATCGAAAC	CCTCTCTCATATACTTGATAGCCAGTTGAACGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GTGTACACCCTCGCCATCTTCGGATCATCCCAGCC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACTAGACCAGAATAAAAGAAAGCCTCTGTTGCAAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCTATACGTCGACGGACGGGGGCGCGACGTGGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTCGGCAAGCTCATCTCGGCCGATACGGTCGAG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCCTTAATAGATCGGATGCAGCAACTTTTTTTA
GTCGCTCCCCGTGGGGGAGCGTGGATCGAAAC	CCTTTCGTTGCACCCATTATCTCTAATAATTCGGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGGTAGGATGGAGCCTCCGGCCAGAGGCGCAGCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GAGAAAGAGATTTGGCGCTTCATGTGACTTGCTCCCC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC

>NC_014664|2|2|1636014-1636635|CRT
GTCACTCCCCGTGCGGGAGCGTGGATCGAAAC	CCTCTCTCATATACTTGATAGCCAGTTGAACGCGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GTGTACACCCTCGCCATCTTCGGATCATCCCAGCC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ACTAGACCAGAATAAAAGAAAGCCTCTGTTGCAAT
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	ATCTATACGTCGACGGACGGGGGCGCGACGTGGG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CTCGGCAAGCTCATCTCGGCCGATACGGTCGAG
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	CCCTTAATAGATCGGATGCAGCAACTTTTTTTA
GTCGCTCCCCGTGGGGGAGCGTGGATCGAAAC	CCTTTCGTTGCACCCATTATCTCTAATAATTCGGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	TGGTAGGATGGAGCCTCCGGCCAGAGGCGCAGCGC
GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC	GAGAAAGAGATTTGGCGCTTCATGTGA
CTTGCTCCCCGTCGCTCCCCGTGCGGGAGCGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_014664.1\|WP_041787348.1\|1626571_1626952_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|227786
NC_014664.1\|WP_041787350.1\|1628166_1628358_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NC_014664.1\|WP_081449415.1\|1635631_1635988_-\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419146.1\|1634302_1635073_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226144
NC_014664.1\|WP_041787200.1\|1639862_1640270_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NC_014664.1\|WP_155942554.1\|1644444_1644600_-\|light-harvesting-protein	unknown	unknown	gnl\|CDD\|366164
NC_014664.1\|WP_013419157.1\|1644931_1645084_-\|light-harvesting-protein	unknown	unknown	gnl\|CDD\|366164
NC_014664.1\|WP_013419154.1\|1644218_1644422_-\|light-harvesting-protein	unknown	unknown	gnl\|CDD\|366164
NC_014664.1\|WP_013418084.1\|1640711_1642295_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NC_014664.1\|WP_155942553.1\|1643518_1643674_-\|light-harvesting-protein	unknown	unknown	gnl\|CDD\|366164
NC_014664.1\|WP_013419145.1\|1632597_1633737_+\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|350690
NC_014664.1\|WP_013419140.1\|1626294_1626489_+\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419151.1\|1642537_1642822_+\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419144.1\|1630969_1632601_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226121
NC_014664.1\|WP_049779262.1\|1638405_1638993_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NC_014664.1\|WP_041787352.1\|1637311_1638277_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NC_014664.1\|WP_013419142.1\|1627040_1627613_-\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419147.1\|1635069_1635288_-\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419156.1\|1644712_1644907_-\|light-harvesting-protein	unknown	unknown	gnl\|CDD\|366164
NC_014664.1\|WP_013419143.1\|1628438_1630460_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_014664.1\|WP_041787348.1\|1626571_1626952_-\|transcriptional-regulator	gnl\|CDD\|227786	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription].	2.20429e-47
NC_014664.1\|WP_041787350.1\|1628166_1628358_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	0.00157076
NC_014664.1\|WP_013419144.1\|1630969_1632601_+\|AAA-family-ATPase	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	1.1732e-21
NC_014664.1\|WP_013419146.1\|1634302_1635073_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|226144	COG3617, COG3617, Prophage antirepressor [Transcription].	1.05499e-38
NC_014664.1\|WP_041787200.1\|1639862_1640270_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	6.29841e-15
NC_014664.1\|WP_013419157.1\|1644931_1645084_-\|light-harvesting-protein	gnl\|CDD\|366164	pfam00556, LHC, Antenna complex alpha/beta subunit.	2.49959e-05
NC_014664.1\|WP_013419154.1\|1644218_1644422_-\|light-harvesting-protein	gnl\|CDD\|366164	pfam00556, LHC, Antenna complex alpha/beta subunit.	0.000335656
NC_014664.1\|WP_155942553.1\|1643518_1643674_-\|light-harvesting-protein	gnl\|CDD\|366164	pfam00556, LHC, Antenna complex alpha/beta subunit.	0.000102602
NC_014664.1\|WP_013419145.1\|1632597_1633737_+\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|350690	cd17932, DEXQc_UvrD, DEXQD-box helicase domain of UvrD. UvrD is a highly conserved helicase involved in mismatch repair, nucleotide excision repair, and recombinational repair. It plays a critical role in maintaining genomic stability and facilitating DNA lesion repair in many prokaryotic species including Helicobacter pylori and Escherichia coli. UvrD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	9.2634e-10
NC_014664.1\|WP_155942554.1\|1644444_1644600_-\|light-harvesting-protein	gnl\|CDD\|366164	pfam00556, LHC, Antenna complex alpha/beta subunit.	2.32518e-05
NC_014664.1\|WP_013418084.1\|1640711_1642295_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	2.23086e-97
NC_014664.1\|WP_049779262.1\|1638405_1638993_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	1.61407e-20
NC_014664.1\|WP_041787352.1\|1637311_1638277_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.3344e-16
NC_014664.1\|WP_013419156.1\|1644712_1644907_-\|light-harvesting-protein	gnl\|CDD\|366164	pfam00556, LHC, Antenna complex alpha/beta subunit.	1.57485e-07

>NC_014664.1|WP_081449415.1|1635631_1635988_-|hypothetical-protein
MQYYAAFEVDGVQVDASTVETPSQSTFIEAFGSGPWTHFSEIAVGDKRVAVVAPELRLATELCRDRKDRAEIIAHWMRDHGCDAPLLRNAMEARGIDAATQSSVMATIRERGELEVRD
>NC_014664.1|WP_013419147.1|1635069_1635288_-|hypothetical-protein
MAISLAIPSEQHEAAPLLGDPLESLHRVANLLLTTLESRASDEDRWACIDLATEILFGAVAKLENTRIGREA
>NC_014664.1|WP_013419146.1|1634302_1635073_-|helix-turn-helix-domain-containing-protein
MKSGAAIVPFDFEGNNVRIVNRDGEAWFVLADVCRVLEIANVGNASARLKEHEQNSIRLTDVIRRGNPNVTIINEPGFYRLVLRSDKPAAERFQDWVVTEVLPSIRKTGSYSARQAEEPRRRELVLADEVLALKRLMLSTTDYAVGLENRIMDLERKAWQMPVDGWTRDWFEARMAAAGIKSYTELAERVCVSKSMLSFMLDGKRSTALPVARGLARELGVPLIEIARRTTGPAMEALLEAGALCAEKGHRAGSAV
>NC_014664.1|WP_013419145.1|1632597_1633737_+|UvrD-helicase-domain-containing-protein
MMGPNKLVIAAAGSGKTTYLVRQALAVEQKRVLITTYTESNEEEIRRKFFEINGSVPGNVHIQTWFSLLIEHGIKPFQGKLFDWDVAGMLLVSQRSGFRGRDLQGRPMYWGEEDFRRCYFDRRNRVYSDKLSRLTIRCNEASDGAVIERLSRIYPFIFVDEVQDLAGHDLDVLAALFQSPANVVMVGDPRQVTYVTHLEARLKKYRDGGIADFIRAELPRKVTCDIDVTSLMTSHRNSTAICELSSKLYPKMAAATACKCPDCRQPAPIDAGLFIVRRKDLPRYLETRRPVQLRWSSTVKIGSPDLPALTFGRSKGLGFDRVIIYPTKEMVDWLKNVQSQLKAETRAKLYVGLTRARHAVAVVYDPADGEIVAGFTVFE
>NC_014664.1|WP_013419144.1|1630969_1632601_+|AAA-family-ATPase
MYIEKVKIKNFKCFEGWFEVDFDQGVNIIVGNNEAGKSTLLEAIHLCLTGMLNGKYLRNELSPYLFNRNIERAYLDSLATKAPLQPPEIQIELFLDGEDDALEELRGNGNSEKNDKARGLLFSIEFDKKYDGAYTELLKGKEINSIPLEFYQVQWSEFSRQPAMARTIPIKSALIDSTSTRVQSGSDMYISRIVREFLDDKERVAISQAHRKLKDAFKADGNVGAINERLAEAAKISRKKVSISVDMSSHNAWESSLMTYIEDVPFHYIGKGEQCIVKTRLALSSKKNSEATVLLIEEPENHLSHSKLNQLISDISTDNSGKQVIITTHSSFVANKLGLDHLILLREAKVTRIKDLDASDFFHKLPGYDTLRLVLSQKSILVEGDADELVVQRAYMDANGGKLPIDDEIDVISVGLSFLRFLELATALKIPVVVATDNDGDTAALEKKYAKYKDVNHITICYDPVVDKGDLVLGGKPFNYNTLEPKLVKSNSVETFNTLFSTKHDLDNLHRYMKNNKTECALAIFSAKIKITYPKYILDAIAK
>NC_014664.1|WP_013419143.1|1628438_1630460_+|hypothetical-protein
MTNTDENLHILPRPVERLPDYAHAKARQTLAERLTNAFDLSGASAIAISNSVVDPSEVRASIGGAEQPDVERIPVPGGTLLGIRTSVWARRVMPDPRNPRTFPARRHPFAIEPGTGGEDSKFRPIPEPRPLDAARPQVAELAVMIENRHHLIWASQHAERFVLEENNWKPSIESQGVMEAVWLVATTYEHADGSAPATVLTTVEGSSRTTAVHSLLEVHSHEVPYDDQDAKLRAYIRRLNELFDKGERDRATTVALRCERIPALILVGFRPYPGGSTTFPTAVRSFVALRHVDPPKPWGPGPENESLADEVLDEFCRRNLISETERDYYAGSCTKAEAKAAHLPVDPVLRAAHIVRLFTSDDSAIKHAMRVAVTSQSSRKNIGSKLKNELATGLILRAVADEPAKVDQIRRYLRHAFGQAVHKVAWTSTGRTTEQIVKESLAEVRAVIGDGSTEEPGPASMELAVRAAYPLVVDGRLNADRGTSNNEQPDRRTPGEILDTMRRSIQGVHQLGRALRDYEEGVPLRAVDEEGEIKRTADDSADQIVSDIYLRNEFPPAGKMKARRPGDTPTDRYYNSLSALGSAMMDVKRTFDDLKEVRGDDNQPIVEVQGVELRHITSWRDLLSIWDEEMVVWGRTFRKKYGTKDHGGAIPREDDEPTEVDPYAEAEYETADN
>NC_014664.1|WP_041787350.1|1628166_1628358_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MKEVRRNLERLGFVATKTRGGHWRFHHPAMDGPVFAPDTPSDHRGLKNLRALLRRKLCAAPVR
>NC_014664.1|WP_013419142.1|1627040_1627613_-|hypothetical-protein
MEDEIEKLREELREMRQQHRQDLESLVAGLQAAWDEELGRLRTEFAARDRIGTCKDDGLPETKSRDVTLDRQTGIPGERPIIRIRGGEIHAAVEAARRILADPATGVTLNAGRLVRAVTRLAPRFLTTRMQTPEVQTALVELDETSLREVLTRHARFEKYDARSKAWVPIDCPVAVARMVLQTVAQASSA
>NC_014664.1|WP_041787348.1|1626571_1626952_-|transcriptional-regulator
MMDIRPIRTAEDHEWALAEIARYFDNQPAPGTPEADRFDVLADLIDAYEARHFPIEAVEPIDLLRTHMEVTGKTQAYLAALLGSRPRASEVLNRRRALTVDMIHKISTGWGIPADCLVRPYHLNAA
>NC_014664.1|WP_013419140.1|1626294_1626489_+|hypothetical-protein
MTAVLSETAFRADPATQGTPTDLDRFEFLLSMMVELKALTQQANLTPETVLLGAAIKEMRERLS
>NC_014664.1|WP_041787352.1|1637311_1638277_-|IS481-family-transposase
MGQILHGSATTTEAVRRAIQHSQESLRALAKRYGINPKTVSKWKKRSSVADVPTGPKEPKSTVLSVEEEAIIVAFRKHTLLPLDDCLYALQATIPHLTRSSLHRCLQRHGISRLPDVEGDKPARKKFKSYPIGYFHVDIAEVQTAEGKLYLYVAIDRTSKFAFVQLVKKTGRTSASAFLVALIEAVPYKIHTVLTDNGIQFTFPPRYADGPTARYMTHMFDMRCSENGIEHRLTKVKHPWTNGQVERMNRTIKEATVKRYHYDRHEQLETHLSDFINAYNFARRLKTLKGLTPYEFICKCWTNEPERFKIDPIHQMPGLNI
>NC_014664.1|WP_049779262.1|1638405_1638993_+|OmpA-family-protein
MLIVGALVCFRVATAFAQYPETIDAETIVKALQPKNAPPTRPLVRSYTPLNRGIAIEGPEIGEEQAPNIDLVVNFEYDQSALTMSDAQITVDTLGRALNDPRLARSRFMIIGHTDARGGDGYNLGLSQRRANAVAARLRDFHAVAANRLVAEGRGMRELKDPVRPLGGINRRVQIKTITWDSSASADRLRPLPKP
>NC_014664.1|WP_041787200.1|1639862_1640270_+|transposase
MSGDTFARRYSVVADTRRRWSEDEKQAIIAEALQPGVNVSAVARRHGIKPSLLFRWRKLAKNDEKPEPAPAFLPVSLTAPGKSRDTIYDHSASDAPAADNRIEIELLNGRRVRVGPGADMGALKRILDIADGRRP
>NC_014664.1|WP_013418084.1|1640711_1642295_+|IS66-family-transposase
MILAERAARLSAEAVAARARAATSSTDALIAHLRLEIEKLRRVLYGSRSEHKARLLEQMELQLEELETAAAEDELLAETATARTQGTPSSTRKHPSRKPFPAHLPRERVVLPAPTCCPSCGSTKLSKLGEDVTETLEVVPRRWKVIQTVREKFSCRCCEAIAQPPAPFHATPRGFAGPGLLAMILFEKFGQHQPLNRQSERYAREGVELSVSTLADQVGSCMAALQPLQALIEAHVLSAERLFGDDTTVPILAKGKTVTGRIWTYVRDDRPFGGTAPPAALYYASRDRRQEHPESHLRDFAGILQADAYSGYNGLYDPAREKGAIVSALCWAHARRQFFELADIAANAKRGKQAPAISPIALEAVKRIDALFDIERSINGLPASERLRVRQKQSAPLLADLKTSLGEERSRLSRSASVARPIDYLLKRWDRFAAFLGDGRICLSNNSAERALRGFALGRKSWLFAGSDRGADRAAFMMTMIMTAKLNGIDPMAWLADVLARIAGQPQSRLHELLPWEWKQPGLQLAA
>NC_014664.1|WP_013419151.1|1642537_1642822_+|hypothetical-protein
MSARWRVRQRLAAIIGASPVGSGCDTNATGELPLTDDIMSFHTLPEKTPDADILREMISFTAERLMEMEVSGLTGTAVDHRDAPLVHDRYESTG
>NC_014664.1|WP_155942553.1|1643518_1643674_-|light-harvesting-protein
MMADPVKVYPSGLTLAEAEELHSYVLNGTRTFGAIALFAHFLAYAFTPWLH
>NC_014664.1|WP_013419154.1|1644218_1644422_-|light-harvesting-protein
MADTDGQAAIWLYVRPSLGIPHFLGAVAIIALVVHLGVLGHTTLLKKYFGGEKLKAASISYVLPSHS
>NC_014664.1|WP_155942554.1|1644444_1644600_-|light-harvesting-protein
MMADPKKVYPTGLTLAEAEELHGYVINGTRVFGAIAVIAHVLAYVYTPWLH
>NC_014664.1|WP_013419156.1|1644712_1644907_-|light-harvesting-protein
MADIDGQAKIWLVVKPEVGLLWLLGGVAFTAVLVHAVLLANTKWFPNYIEGKAKVAIEHVIPHA
>NC_014664.1|WP_013419157.1|1644931_1645084_-|light-harvesting-protein
MADPNKVYPTGLTLAEAEELHGYVINGTRTFGAIAVLAHVLAYAFTPWLH

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Crispr_ID: NC_014664_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014664_3

2048647-2049436

TypeIII

Consensus_repeat	Method
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	PILER-CR
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CRISPRCasFinder
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CRT

11 spacers

cas1,cas2,RT,csb2gr5,csm3gr7,csx19,cas10,csm6,csx1,csx16

The CRISPR arrays of NC_014664_3

>merge|NC_014664|3|2048647-2049436|PILER-CR,CRISPRCasFinder,CRT
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACTTGCCTGCGGCGTCGGTTTGACACTTCTTGCTACTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACGTTTTTCACGGCTTTCGTGCGCCGTGTTTCATCTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACCAGAACAACAGGATGGGATTGAAAAATATCTGACCTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACATTAATTGAAGTGCTATCATCACGTACATGAGACTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACCGGATTTGGTCACCGGTGGAGCCGGTTGCAAACTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACCGATGACATCGTCGGACTTCATCACCCCTCCGCCTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACTACGAATACGAACGGGCTTGCCAATGTTGGAACTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACGAGAATTCGTCCACCGTCTTGGCTTCACGCAGCTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACAGGCGGGGCCTCGTCAACACCGCCGCGATGACCCTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACGGACAGAGTCTGCTTTGGTCTTTTCCCGCGAACTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACCTTTCAGTTCACGCATGGCGTTGCCTCCGGCTCTCTCAGGCCGCTTCGGCGGCTTGCCCAAAATGAAA

>NC_014664|3|3|2048647-2049368|PILER-CR
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TTGCCTGCGGCGTCGGTTTGACACTTCTTGCTA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GTTTTTCACGGCTTTCGTGCGCCGTGTTTCAT
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CAGAACAACAGGATGGGATTGAAAAATATCTGAC
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	ATTAATTGAAGTGCTATCATCACGTACATGAGA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CGGATTTGGTCACCGGTGGAGCCGGTTGCAAA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CGATGACATCGTCGGACTTCATCACCCCTCCGC
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TACGAATACGAACGGGCTTGCCAATGTTGGAA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GAGAATTCGTCCACCGTCTTGGCTTCACGCAG
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	AGGCGGGGCCTCGTCAACACCGCCGCGATGACC
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GGACAGAGTCTGCTTTGGTCTTTTCCCGCGAA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC

>NC_014664|3|3|2048647-2049436|CRISPRCasFinder
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TTGCCTGCGGCGTCGGTTTGACACTTCTTGCTA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GTTTTTCACGGCTTTCGTGCGCCGTGTTTCAT
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CAGAACAACAGGATGGGATTGAAAAATATCTGAC
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	ATTAATTGAAGTGCTATCATCACGTACATGAGA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CGGATTTGGTCACCGGTGGAGCCGGTTGCAAA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CGATGACATCGTCGGACTTCATCACCCCTCCGC
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TACGAATACGAACGGGCTTGCCAATGTTGGAA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GAGAATTCGTCCACCGTCTTGGCTTCACGCAG
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	AGGCGGGGCCTCGTCAACACCGCCGCGATGACC
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GGACAGAGTCTGCTTTGGTCTTTTCCCGCGAA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CTTTCAGTTCACGCATGGCGTTGCCTCCGGCT
CTCTCAGGCCGCTTCGGCGGCTTGCCCAAAATGAAA

>NC_014664|3|3|2048647-2049436|CRT
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TTGCCTGCGGCGTCGGTTTGACACTTCTTGCTA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GTTTTTCACGGCTTTCGTGCGCCGTGTTTCAT
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CAGAACAACAGGATGGGATTGAAAAATATCTGAC
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	ATTAATTGAAGTGCTATCATCACGTACATGAGA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CGGATTTGGTCACCGGTGGAGCCGGTTGCAAA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CGATGACATCGTCGGACTTCATCACCCCTCCGC
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TACGAATACGAACGGGCTTGCCAATGTTGGAA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GAGAATTCGTCCACCGTCTTGGCTTCACGCAG
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	AGGCGGGGCCTCGTCAACACCGCCGCGATGACC
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GGACAGAGTCTGCTTTGGTCTTTTCCCGCGAA
CTCTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CTTTCAGTTCACGCATGGCGTTGCCTCCGGCT
CTCTCAGGCCGCTTCGGCGGCTTGCCCAAAATGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_014664.1\|WP_013419514.1\|2062431_2062728_-\|CRISPR-associated-protein-Csx16	csx16	pfam09652_csx16_CAS-I:CAS-III	gnl\|CDD\|370601
NC_014664.1\|WP_013419508.1\|2054121_2056515_-\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NC_014664.1\|WP_013419499.1\|2043376_2043523_+\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_081449440.1\|2045203_2045956_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
NC_014664.1\|WP_013419511.1\|2059759_2060842_-\|putative-CRISPR-associated-protein	csm6	cd09742_csm6_CAS-III-A:CAS-III-D	gnl\|CDD\|187873
NC_014664.1\|WP_013419510.1\|2059368_2059824_+\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419504.1\|2047138_2048239_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_014664.1\|WP_155942411.1\|2056511_2058245_-\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl\|CDD\|224272
NC_014664.1\|WP_013419498.1\|2043123_2043294_-\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_049779313.1\|2044940_2045165_-\|Fic-family-protein	unknown	unknown	gnl\|CDD\|131662
NC_014664.1\|WP_013419506.1\|2051798_2052440_-\|TIGR03984-family-CRISPR-associated-protein	csx19	cls001376_csx19_CAS-III-D	gnl\|CDD\|274900
NC_014664.1\|WP_013419500.1\|2043624_2043906_+\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419503.1\|2046848_2047142_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|378256
NC_014664.1\|WP_013419505.1\|2049501_2051802_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NC_014664.1\|WP_013419501.1\|2043902_2044736_+\|zeta-toxin-family-protein	unknown	unknown	gnl\|CDD\|368892
NC_014664.1\|WP_013419513.1\|2062012_2062384_-\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419497.1\|2042745_2043036_+\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419502.1\|2045952_2046834_-\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NC_014664.1\|WP_013419512.1\|2060853_2062020_-\|TIGR02584-family-CRISPR-associated-protein	csx1	pfam09623_csx1_CAS-III	gnl\|CDD\|187872
NC_014664.1\|WP_013419507.1\|2052436_2054125_-\|hypothetical-protein	csm3gr7	COG1337_csm3gr7_CAS-III-D	gnl\|CDD\|224256

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_014664.1\|WP_013419514.1\|2062431_2062728_-\|CRISPR-associated-protein-Csx16	csx16	pfam09652_csx16_CAS-I:CAS-III	1.7e-31	103.1	0.0
NC_014664.1\|WP_013419511.1\|2059759_2060842_-\|putative-CRISPR-associated-protein	csm6	cd09742_csm6_CAS-III-A:CAS-III-D	1.3e-30	100.8	0.0
NC_014664.1\|WP_013419504.1\|2047138_2048239_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1.1e-78	259.1	0.0
NC_014664.1\|WP_155942411.1\|2056511_2058245_-\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	5.3e-115	379.4	0.0
NC_014664.1\|WP_081449440.1\|2045203_2045956_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	8.1e-17	55.9	0.6
NC_014664.1\|WP_013419507.1\|2052436_2054125_-\|hypothetical-protein	csm3gr7	COG1337_csm3gr7_CAS-III-D	1.8e-31	104.2	0.0
NC_014664.1\|WP_013419503.1\|2046848_2047142_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.8e-17	58.1	0.0
NC_014664.1\|WP_013419505.1\|2049501_2051802_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	8.5e-105	346.7	0.0
NC_014664.1\|WP_013419506.1\|2051798_2052440_-\|TIGR03984-family-CRISPR-associated-protein	csx19	cls001376_csx19_CAS-III-D	7.3e-57	186.8	0.0
NC_014664.1\|WP_013419502.1\|2045952_2046834_-\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	4.1e-38	125.8	0.0
NC_014664.1\|WP_013419512.1\|2060853_2062020_-\|TIGR02584-family-CRISPR-associated-protein	csx1	pfam09623_csx1_CAS-III	5.2e-65	214.0	0.0
NC_014664.1\|WP_013419508.1\|2054121_2056515_-\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	7.5e-23	75.8	0.1

Protein	Function_ID	Function_description	E-value
NC_014664.1\|WP_013419514.1\|2062431_2062728_-\|CRISPR-associated-protein-Csx16	gnl\|CDD\|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	1.59366e-42
NC_014664.1\|WP_013419511.1\|2059759_2060842_-\|putative-CRISPR-associated-protein	gnl\|CDD\|187873	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; loosely associated with CRISPR/Cas systems; also known as APE2256 family.	4.74148e-25
NC_014664.1\|WP_013419504.1\|2047138_2048239_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.2412e-90
NC_014664.1\|WP_155942411.1\|2056511_2058245_-\|hypothetical-protein	gnl\|CDD\|224272	COG1353, COG1353, Predicted CRISPR-associated polymerase [Defense mechanisms].	6.65692e-06
NC_014664.1\|WP_081449440.1\|2045203_2045956_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	3.85205e-12
NC_014664.1\|WP_049779313.1\|2044940_2045165_-\|Fic-family-protein	gnl\|CDD\|131662	TIGR02613, cell_filamentation_protein, mobile mystery protein B. Members of this protein family, which we designate mobile mystery protein B, are found in mobization-related contexts more often than not, including within a CRISPR-associated gene region in Geobacter sulfurreducens PCA, and on plasmids in Agrobacterium tumefaciens and Coxiella burnetii, always together with mobile mystery protein A (TIGR02612), a member of the family of helix-turn-helix DNA binding proteins (pfam01381). This protein is encoded by the downstream member of the gene pair and belongs to the Fic protein family (pfam02661), where Fic (filamentation induced by cAMP) is a regulator of cell division. The characteristics of having a two-gene operon in a varied context and often on plasmids, with one member affecting cell division and the other able to bind DNA, suggests similarity to addiction modules.	3.27503e-23
NC_014664.1\|WP_013419506.1\|2051798_2052440_-\|TIGR03984-family-CRISPR-associated-protein	gnl\|CDD\|274900	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family. Members of this protein family are found exclusively in CRISPR-containing organisms, in operon contexts with RAMP (repeat-associated mystery protein) proteins also linked to CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats).	8.47288e-42
NC_014664.1\|WP_013419507.1\|2052436_2054125_-\|hypothetical-protein	gnl\|CDD\|224256	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.70055e-21
NC_014664.1\|WP_013419503.1\|2046848_2047142_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	7.60059e-14
NC_014664.1\|WP_013419505.1\|2049501_2051802_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	4.79711e-86
NC_014664.1\|WP_013419501.1\|2043902_2044736_+\|zeta-toxin-family-protein	gnl\|CDD\|368892	pfam06414, Zeta_toxin, Zeta toxin. This family consists of several bacterial zeta toxin proteins. Zeta toxin is thought to be part of a postregulational killing system in bacteria. It relies on antitoxin/toxin systems that secure stable inheritance of low and medium copy number plasmids during cell division and kill cells that have lost the plasmid.	2.79072e-22
NC_014664.1\|WP_013419502.1\|2045952_2046834_-\|RNA-directed-DNA-polymerase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	7.38029e-78
NC_014664.1\|WP_013419512.1\|2060853_2062020_-\|TIGR02584-family-CRISPR-associated-protein	gnl\|CDD\|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	5.97686e-64
NC_014664.1\|WP_013419508.1\|2054121_2056515_-\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	1.55798e-19

>NC_014664.1|WP_013419504.1|2047138_2048239_-|CRISPR-associated-endonuclease-Cas1
MLSWGSFQRLFGSAPPPSDWPPPLSLEEEAEQDIRFSPAAAPVHVLSGAAVVRVNNSTLLVERPGEPVFERPIELVSTLHIHGWARVTGACIGRLTAQGATVVWRGLHGYPVALAQPMHGAGLDIRRAQYFEAAGERGLAIARALISAKIQNMRGLVRRRANIEGRDCLTALAALAKKAKHASRESLLGIEGSATAFYFSAWPHMFAARAGDVEFEVRSRRPPQNAVNATLSYAYAVLSAECVCALAAVGLDPRLGVFHQPRSGRASLALDLMEPFRPLIADQAVLTGFNTGQIRTGDAAEADDGWRLGETGKRTVIDLMEKRLTTAISVSGTEQQVSYREAIGRQARGIATALQTGAGFEALERP
>NC_014664.1|WP_013419503.1|2046848_2047142_-|CRISPR-associated-endonuclease-Cas2
MSKAAHLYLVAYDISCPRRWKRVQKVIKGLCRRSQLSVHFCRATPARIRRLENRLHRIMHDEEDRLMVIDLGPAHTQAQLSLLNPINDIADLKAAIL
>NC_014664.1|WP_013419502.1|2045952_2046834_-|RNA-directed-DNA-polymerase
MNSQAQSACCAGANQIVEGATLEKVVAPACLQQAWTRVRKNKGGPGGDGVTIEIFAQNAEVELEKLRAETLAGIYRPRKVRHAIVPKPKGGERKLTIPSVVDRILQTATMLSLGQTVDHHFSSASWAYREGRGVDDALADLRRLRNSGLFWTFDADIMQYFDRILHKRLIDDLFIWVDDLRIVRLIQLWLRSFSYWGRGIAQGAPISPLLANLFLHPMDRLLELEGLASVRYADDFVVLCRSKALAQKAQLIVASHLAARGLKLNMSKTRILAPSEAFIFLGQTVEPVWDTQP
>NC_014664.1|WP_081449440.1|2045203_2045956_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MMQRTQPVQAWRWSVSPPGPHLTATVPVMEAIRGAAIFMRREMGNGLFPESFHGADRGGHAHAFWLPEDEDGDGLIDHIWVSCASGMDARTIAALASVEWFRAEGVRYEVAPSWMGPRPLDGIFGPSAVWQGVTPYVTSRRRLTKTGKERADETPEAQLLRELLLRGLPAPVEIGWEPAAWCGEDNVLASQFAINWDKRGGPPADAVASFPAIVFAEPVPGPLAFGHAAHFGLGLLVPQIGSACNSLHIS
>NC_014664.1|WP_049779313.1|2044940_2045165_-|Fic-family-protein
MVFIHPFPNGNGRHARIMADMVLTRVYNQNPIHWSGGFDLQRMNERRLVYIAALRAADRGDLATLLAFACHGER
>NC_014664.1|WP_013419501.1|2043902_2044736_+|zeta-toxin-family-protein
MNSRSYKLSPEIHNEIFETVKHNTLANAQAAAKPVLAIIGAQPGAMRWRISAALIEGMDPDPVIFSVAGARHLHPLADEILAENEKSFVQATEADAEKWTESLILAAVSCRRNILLDGFLGRKDATLNVLRQAREADYDTRVVAIAVPESISRARIVDLYEAGKEKRGSGTWISAHAHDGAVQTLVHTLTAIEVRNLATIDVFDRDGALLLSTEERRDAGGAFRREMARPLDAIDKERLKTIQLRIDAKMEARQAGILEKLEAQTVIHSGRSTGLER
>NC_014664.1|WP_013419500.1|2043624_2043906_+|hypothetical-protein
MSEPDCSDDGWNSEVVIRQEQATDDMFAYIDELYLKHKDATRSGDQDNIAFLEAKIKEAITLQRRLYASFGVEVFEHCAAELHALKKYFRRDA
>NC_014664.1|WP_013419499.1|2043376_2043523_+|hypothetical-protein
MENEIRQIASDLVEVIVRLQFLAVRLERAVREAGLSRSGPIGRLEDSL
>NC_014664.1|WP_013419498.1|2043123_2043294_-|hypothetical-protein
MDEKKTETLTIRLTPSQKALLVQLAKADKRPPAQLAAIVIEEWLEAKSGVPDKTVR
>NC_014664.1|WP_013419497.1|2042745_2043036_+|hypothetical-protein
MPKASSGNARNFGEVRRYLRREVRLKKDGAGRSWRSAKPLLDAHFYLSRLAQTSPLQPQPLVVQELDPGLFERLPDGAAHDGERRPSAILEIPSDQ
>NC_014664.1|WP_013419505.1|2049501_2051802_-|TIGR03986-family-CRISPR-associated-RAMP-protein
MTQFHNPYNFVPLGRKLEGLLGQEKPKGHDRYHRDLWSGRIEIEIETVTPLLIRDAARAEEHEDDAEHKTFGVRRGPDGRPLLPATSLKGALRSAFEVVTNSRFSVFEKHEKPPARRMAAGDGLAMVPARISDDGYNLEMLLGSHDGLTWGGARPTWNNDLGRWILPNDTLYAAWLPQYQKGTGGYDHTHGVQLNGGGWPKHAQAVSCWIELWAKGPFKYWRVRSIAAIGLSSNLRKPPASTQGYGQHRPVGGVAARLIQVNGWVVKTNQNFGKKHDERVFFSSSGSASHQVPLVTDWRDRYIDLVRDYHRTHKSDLEQRKRRKEPFDKFYGNEPGRTAWSRHVCNPDEARLNPGDLVYARIDRAGNIEGLYPVMISRELGQAAPERLLPHELHPATKSRELSPADRVFGWVNQQGAGAYKGQLRIHSVKCGTAAEEAVDKFDPALPLAILGAPKEAQARFYVGKPDGRAMPTNTNTAGGAYFEKGKDAHEKWNLRGRKVYPHHAATLSAKAKAAGYWDPEKAVEEAHYEPTISDEHIVDLEAPGAAYREYIRRRGLKRDKNGQLSETGNQDSQNRSITEWVRPGTKFTAAIDVVNLNIVELGVLLWLLDPPVKPRAFHRLGGGKPLGFGSARISITHVSLKTGAAKAADYRAFFGQPDYSGIEAPLTGGPTVAGAFIAKAEAAWGSAFVSLPNAQAFLQAARGYRDGLPTHYPRRDHYPNPAGENYKWFGENESGRKEEPRRRKGLRLSLPAITDDEGLPLDPTQ
>NC_014664.1|WP_013419506.1|2051798_2052440_-|TIGR03984-family-CRISPR-associated-protein
MTEKLEYRQWRFENMTAAEALSYVGNSLGSEVSRGFVLSPEQACFCTLRGSGADVSLYGCDETAEGQALDPDLVFEFRLFGPNFDARWERTSGLTGELRICSDSSATGHEVQLKQPNDDVTEKGGEAVPYVIKRENRYLIWGEPVGKPGEGGTKLTSSRIGTLWVPVESSARVELTAYEYFGTAKYGNAVFVGERLTGLRAVADDGKKSGASQ
>NC_014664.1|WP_013419507.1|2052436_2054125_-|hypothetical-protein
MSRHIARRVTVEGQLLCLTPLHVGGLDTPSSSDLPLAMNGEGKFYVPGTSLAGPLRAWCRETYPDTWMNLWGVGSQELPVAPDNESEEEKKARTKPDRASFVIVEDAIVEDGALAPEVRDGVGIDRYTGTAADKVKFDREVLPAGTRLFFHLVFEETAGEAENAKIVASLVHALQQGAVPLGASVSRGLGSVRLEKLEVNEQRFGRKEHALAALRGKGVPGGLEVLCADWEEQARDRPLIKIKIEWKPEGPLMVKSGVDGMAVDMLPLTSPKDGSLRLVLPGSSVKGALRSQAERIIATLLDPTEHPELRKNFLKQLARFQIVTDLFGAANASASGENENRHWLPGRSPLSVGDCFSTTEISPDVQKHMLSGASGADLRFWTEGLPELKWNDSGEPYLDPAAHVAIDRWLGGASDGALFSVLEPCNFSWNELEIVIDPARLPRRGEAGNTADALAAIALLLLTLADLVGGEIALGFGANRGLGTAKATELNLDVPAFDTHPDGFVRNVLEDLAGLTASIDGEEGKLRLDGGAVERLRKAWRAGIERLSRMESPANQQIGAAA
>NC_014664.1|WP_013419508.1|2054121_2056515_-|hypothetical-protein
MTLQFSLSIEMISDWHIGSGQGRHGSIDRLIDRDRDDLPYIPAATVRGIWRDSAQLLARGLDDGVEDGPWSKLADRLFGSEPVLTPKRQDAPTPSLLTVDDARFPASLRAEFADASGDSATRAAGKKVLRQALTFIKPGVSIDPRSGTAKEDFLRFEEVARGGAVLEAKGIVDCPDADMRVVAAFLLGAAAMIERLGGKRRRGLGRCAVKLSFSNAGLPADATGAAAILGASDAPSLPNASNSGVEQRAFGSVQSGDWQKIPLRLKLLAPLVAADDVRGNVITCRDYIPSALLLAPIASRLAAAGLANIWTLIANGDVRILAATPEIDGGRGLPVPLCWEEEKAKKGEGVYRQIPRTASGENAQYVPIRAGFVGASEFHLRSVPKVIRTHNTIEDERQRPDETVGGVYTYEALAPGLTFRSEVWIRGGAVDSAALSGTVRLGRARQAGYGVVEIEPLGAASGASERKTRDGYVTIWLTSDAILPSVELDGGLKAIASAVARLLGSRADALFDLEGSWANLRWKRIDGWQSRWNLPRPTLVALQAGSVAELKLAKGVTIDAAKVEALEREGIGARKGEGFGCLLVNHAHLVNESSDMRQEKAKPGSFEDGNQPAGKREKDPQQEKYLNRIHRVAWERCIALRAEMAVSSEDARKELLGWTGAKPSMSQLGGLRAAMGTLTEKDIEFLQDWLKRLRDSKKWDGKAMDSLEELLKRTCEKTWPHEKIWQNLGLQGLDDERFLGAPRPATDGFDSTTHPELARFAVRTFILEAMRAHKRHGEKNGTADQDGATNNTNQEAA
>NC_014664.1|WP_155942411.1|2056511_2058245_-|hypothetical-protein
MGSSDTFDHVVLIETASNQHTIFQTNRLRENIGASELIYRVGTVFVDEAVKKLEPGSADIVVRASGKAIVLVRGRTNAEAIIRDVTLRTLLECPGVVARGAHAEIKGPSAKDLDNAIREAHRLVNEVASRLPPPQARFQRLPFVENCASSSYPAAALNWKASRDGNAPAHSEVIFARRDGKVRAEAHERIGKITKAPLAQSLDAFEEASEDGTIGDWIAIVHADGNGLGQVFLNFVDRIEKDASADDYVKALKGFSSAVDDWSRAAAGKAIEETWGDIKKKIEDREKTGKGRKYFLPVAPVVLGGDDLTVICEGERAVRFAAAYIRAFEDVSREALAGDLGKLVPNIGMDFVAVAAGIAIVKPHFPFHRAYELAEELTGSAKAAKKHFKEIPCSALDFQVVFDSSGGKLEPIRDRLILEDADKTKTSLTMRPYVVTPQERLEAATDEAKEWAERRHYSEGERSLLCAVAALLKKPDPDKERGDDAFLPRSQAHALREAIYLGRKVADGRLAQIHHRYPNFAWESLTGNSRSLFVDDGTWKDEEGNEHRLVGTYLLDAMDLADLAGQAALEPLAASDQ
>NC_014664.1|WP_013419510.1|2059368_2059824_+|hypothetical-protein
MLVLLRDFLTSNDFTAFLNVIQLGGVLGIGATLWQMGRDREPIAIWVQSDDGRTKLIGTIPRRVLTRAEVTGWISMKAGRPRLDFTRFEPNYSFPDDKVVVPMTAADFELLEKPPHRPKRAPSKGRSFVRLTPSGGSRPRRIPRATRPCLQ
>NC_014664.1|WP_013419511.1|2059759_2060842_-|putative-CRISPR-associated-protein
MGRLIVGLTGISVAGREEYEPADSFSRRVRQRLRDEKAKDGARYYTVASAEINVLSKLGCSEEDHVLLLASDTPVGKACAELVRETVKNEFGAEGEVQPVPGLQMTDATLFRRDGVRNLFEKLRRAQAKAQELGLDFVLNMNGGFKSVLPFAALYGMTQQAPSYYSYEWTSTLIKLPALPLTFDWDRLGFAADALIALRDKGIMQAHEFEALLPGHGYRDDPLFRVLIEEDDGLVVPSAAGDLMFERLAFEASTSQVLLSPRAWRKAKGSGTEPATLEALAEIRDPLLRAKPGHCERYAGKTNLLIWKTTTGSWPRLFYWVERNGVHVAEILRHDEYDVATEGKGVWREEFDGDDFHRWE
>NC_014664.1|WP_013419512.1|2060853_2062020_-|TIGR02584-family-CRISPR-associated-protein
MRDASTFSRRILLCTVGLAPQIVTETLYALCMERTPPFLPTEIHVITTAQGEARTRQMLLNPPQEQLAKFEAEFGFPVAEALTVGRIHVVQADGVQLGDISTEAHNKALADLIIQTVHEVTRDDRAAIHFSIAGGRKTMGVLLGLAVSLFARPQDSLSHVLVEPQPLEQHPEFFFPPRIARDLEDKFNPGVPISTDKARIVLAEIPFVRLRQGLPMHLLEGAWSFTETVARAQAAVTSPELVIDRAAQKVSCQGIIFELTPMQFSLYSLLAKRRLCGMGSDGFVHWTEIGGDEFIAEIESLPLTTFHDLNRLRRDFAKIGDTKQEDPRPDKFEQAKARLNERIRERLGHFSPTYEVKSRKARSQSLLGLDLPVSAIRFGAVDDDSESN
>NC_014664.1|WP_013419513.1|2062012_2062384_-|hypothetical-protein
MAAFYTWFDIIAGFVTEQNIRIVTTYATFFLVAWNLAKTLRNNQKITIIAVNDRSGESLAVARIPRFQVTRSEVLGIMRLQAGGNQLDTSCFKWNDKIPRKARFHFPPSSFALLTGQKVAVNA
>NC_014664.1|WP_013419514.1|2062431_2062728_-|CRISPR-associated-protein-Csx16
MATYFVTRHEGAIDWALRKGIEAQLVTHLDPSKIEKGDVVLGTLPVQIIAQINERGARYLHLEMSLPADQRGIALTADDMERLGAQLIEYEARRISEN

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Crispr_ID: NC_014664_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014664_4

2058649-2059300

TypeIII

Consensus_repeat	Method
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	PILER-CR
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CRISPRCasFinder
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CRT

9 spacers

cas10,csm3gr7,csx19,cas1,cas2,RT,csb2gr5,csm6,csx1,csx16

The CRISPR arrays of NC_014664_4

>merge|NC_014664|4|2058649-2059300|PILER-CR,CRISPRCasFinder,CRT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACTCGCCAAAACCCCGATTTTTTAGGAGCTTTTCTCTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACGGATTAGAGCGAGGCCGAATGCACCTTCCACACTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACTCGCGACTCCGCATACCAGTAAGATAATCATCGCCTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACTTCAACAGCATCGATATCGCGCCAAATAAAATCTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACGGCGAACCTCGTCAGGATTGGTAATCCAATTCCTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACCTTCTCGATGACATACGTCAACATTAGCTTTGGCTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACCCATTTTCCGCGACAGCATACGGCCTGATCGCCTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACCTGCGCAAGAACTCCGATAATTTCATGATGCGTCTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAACCCGTTTTCACTGATTAACGAAACCCAGAATTCTTTCAGGCCGCTTCGGCGGCTTGCCCGCATAAAAA

>NC_014664|4|4|2058649-2059233|PILER-CR
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TCGCCAAAACCCCGATTTTTTAGGAGCTTTTCT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GGATTAGAGCGAGGCCGAATGCACCTTCCACA
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TCGCGACTCCGCATACCAGTAAGATAATCATCGC
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TTCAACAGCATCGATATCGCGCCAAATAAAAT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GGCGAACCTCGTCAGGATTGGTAATCCAATTC
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CTTCTCGATGACATACGTCAACATTAGCTTTGG
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CCATTTTCCGCGACAGCATACGGCCTGATCGC
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CTGCGCAAGAACTCCGATAATTTCATGATGCGT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC

>NC_014664|4|4|2058649-2059300|CRISPRCasFinder
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TCGCCAAAACCCCGATTTTTTAGGAGCTTTTCT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GGATTAGAGCGAGGCCGAATGCACCTTCCACA
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TCGCGACTCCGCATACCAGTAAGATAATCATCGC
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TTCAACAGCATCGATATCGCGCCAAATAAAAT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GGCGAACCTCGTCAGGATTGGTAATCCAATTC
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CTTCTCGATGACATACGTCAACATTAGCTTTGG
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CCATTTTCCGCGACAGCATACGGCCTGATCGC
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CTGCGCAAGAACTCCGATAATTTCATGATGCGT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CCGTTTTCACTGATTAACGAAACCCAGAATT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCATAAAAA

>NC_014664|4|4|2058649-2059300|CRT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TCGCCAAAACCCCGATTTTTTAGGAGCTTTTCT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GGATTAGAGCGAGGCCGAATGCACCTTCCACA
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TCGCGACTCCGCATACCAGTAAGATAATCATCGC
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	TTCAACAGCATCGATATCGCGCCAAATAAAAT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	GGCGAACCTCGTCAGGATTGGTAATCCAATTC
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CTTCTCGATGACATACGTCAACATTAGCTTTGG
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CCATTTTCCGCGACAGCATACGGCCTGATCGC
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CTGCGCAAGAACTCCGATAATTTCATGATGCGT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCGTGAAAC	CCGTTTTCACTGATTAACGAAACCCAGAATT
CTTTCAGGCCGCTTCGGCGGCTTGCCCGCATAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_014664.1\|WP_013419514.1\|2062431_2062728_-\|CRISPR-associated-protein-Csx16	csx16	pfam09652_csx16_CAS-I:CAS-III	gnl\|CDD\|370601
NC_014664.1\|WP_013419510.1\|2059368_2059824_+\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419507.1\|2052436_2054125_-\|hypothetical-protein	csm3gr7	COG1337_csm3gr7_CAS-III-D	gnl\|CDD\|224256
NC_014664.1\|WP_013419511.1\|2059759_2060842_-\|putative-CRISPR-associated-protein	csm6	cd09742_csm6_CAS-III-A:CAS-III-D	gnl\|CDD\|187873
NC_014664.1\|WP_013419504.1\|2047138_2048239_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_014664.1\|WP_155942411.1\|2056511_2058245_-\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl\|CDD\|224272
NC_014664.1\|WP_081449440.1\|2045203_2045956_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
NC_014664.1\|WP_049779313.1\|2044940_2045165_-\|Fic-family-protein	unknown	unknown	gnl\|CDD\|131662
NC_014664.1\|WP_013419518.1\|2066082_2067030_-\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419503.1\|2046848_2047142_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|378256
NC_014664.1\|WP_013419505.1\|2049501_2051802_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NC_014664.1\|WP_013419506.1\|2051798_2052440_-\|TIGR03984-family-CRISPR-associated-protein	csx19	cls001376_csx19_CAS-III-D	gnl\|CDD\|274900
NC_014664.1\|WP_013419513.1\|2062012_2062384_-\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419515.1\|2063019_2063286_+\|BrnT-family-toxin	unknown	unknown	gnl\|CDD\|225481
NC_014664.1\|WP_013419502.1\|2045952_2046834_-\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NC_014664.1\|WP_013419519.1\|2067319_2069122_-\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|237539
NC_014664.1\|WP_013419512.1\|2060853_2062020_-\|TIGR02584-family-CRISPR-associated-protein	csx1	pfam09623_csx1_CAS-III	gnl\|CDD\|187872
NC_014664.1\|WP_013419508.1\|2054121_2056515_-\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NC_014664.1\|WP_013419517.1\|2064018_2065854_-\|hypothetical-protein	unknown	unknown	unknown
NC_014664.1\|WP_013419516.1\|2063263_2063563_+\|BrnA-antitoxin-family-protein	unknown	unknown	gnl\|CDD\|373040

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_014664.1\|WP_013419514.1\|2062431_2062728_-\|CRISPR-associated-protein-Csx16	csx16	pfam09652_csx16_CAS-I:CAS-III	1.7e-31	103.1	0.0
NC_014664.1\|WP_013419507.1\|2052436_2054125_-\|hypothetical-protein	csm3gr7	COG1337_csm3gr7_CAS-III-D	1.8e-31	104.2	0.0
NC_014664.1\|WP_013419511.1\|2059759_2060842_-\|putative-CRISPR-associated-protein	csm6	cd09742_csm6_CAS-III-A:CAS-III-D	1.3e-30	100.8	0.0
NC_014664.1\|WP_013419504.1\|2047138_2048239_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1.1e-78	259.1	0.0
NC_014664.1\|WP_155942411.1\|2056511_2058245_-\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	5.3e-115	379.4	0.0
NC_014664.1\|WP_081449440.1\|2045203_2045956_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	8.1e-17	55.9	0.6
NC_014664.1\|WP_013419503.1\|2046848_2047142_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.8e-17	58.1	0.0
NC_014664.1\|WP_013419505.1\|2049501_2051802_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	8.5e-105	346.7	0.0
NC_014664.1\|WP_013419506.1\|2051798_2052440_-\|TIGR03984-family-CRISPR-associated-protein	csx19	cls001376_csx19_CAS-III-D	7.3e-57	186.8	0.0
NC_014664.1\|WP_013419502.1\|2045952_2046834_-\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	4.1e-38	125.8	0.0
NC_014664.1\|WP_013419512.1\|2060853_2062020_-\|TIGR02584-family-CRISPR-associated-protein	csx1	pfam09623_csx1_CAS-III	5.2e-65	214.0	0.0
NC_014664.1\|WP_013419508.1\|2054121_2056515_-\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	7.5e-23	75.8	0.1

Protein	Function_ID	Function_description	E-value
NC_014664.1\|WP_013419514.1\|2062431_2062728_-\|CRISPR-associated-protein-Csx16	gnl\|CDD\|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	1.59366e-42
NC_014664.1\|WP_013419507.1\|2052436_2054125_-\|hypothetical-protein	gnl\|CDD\|224256	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.70055e-21
NC_014664.1\|WP_013419511.1\|2059759_2060842_-\|putative-CRISPR-associated-protein	gnl\|CDD\|187873	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; loosely associated with CRISPR/Cas systems; also known as APE2256 family.	4.74148e-25
NC_014664.1\|WP_013419504.1\|2047138_2048239_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.2412e-90
NC_014664.1\|WP_155942411.1\|2056511_2058245_-\|hypothetical-protein	gnl\|CDD\|224272	COG1353, COG1353, Predicted CRISPR-associated polymerase [Defense mechanisms].	6.65692e-06
NC_014664.1\|WP_081449440.1\|2045203_2045956_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	3.85205e-12
NC_014664.1\|WP_049779313.1\|2044940_2045165_-\|Fic-family-protein	gnl\|CDD\|131662	TIGR02613, cell_filamentation_protein, mobile mystery protein B. Members of this protein family, which we designate mobile mystery protein B, are found in mobization-related contexts more often than not, including within a CRISPR-associated gene region in Geobacter sulfurreducens PCA, and on plasmids in Agrobacterium tumefaciens and Coxiella burnetii, always together with mobile mystery protein A (TIGR02612), a member of the family of helix-turn-helix DNA binding proteins (pfam01381). This protein is encoded by the downstream member of the gene pair and belongs to the Fic protein family (pfam02661), where Fic (filamentation induced by cAMP) is a regulator of cell division. The characteristics of having a two-gene operon in a varied context and often on plasmids, with one member affecting cell division and the other able to bind DNA, suggests similarity to addiction modules.	3.27503e-23
NC_014664.1\|WP_013419503.1\|2046848_2047142_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	7.60059e-14
NC_014664.1\|WP_013419505.1\|2049501_2051802_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	4.79711e-86
NC_014664.1\|WP_013419506.1\|2051798_2052440_-\|TIGR03984-family-CRISPR-associated-protein	gnl\|CDD\|274900	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family. Members of this protein family are found exclusively in CRISPR-containing organisms, in operon contexts with RAMP (repeat-associated mystery protein) proteins also linked to CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats).	8.47288e-42
NC_014664.1\|WP_013419515.1\|2063019_2063286_+\|BrnT-family-toxin	gnl\|CDD\|225481	COG2929, COG2929, Uncharacterized protein conserved in bacteria [Function unknown].	5.16235e-26
NC_014664.1\|WP_013419502.1\|2045952_2046834_-\|RNA-directed-DNA-polymerase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	7.38029e-78
NC_014664.1\|WP_013419512.1\|2060853_2062020_-\|TIGR02584-family-CRISPR-associated-protein	gnl\|CDD\|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	5.97686e-64
NC_014664.1\|WP_013419508.1\|2054121_2056515_-\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	1.55798e-19
NC_014664.1\|WP_013419519.1\|2067319_2069122_-\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|237539	PRK13878, PRK13878, conjugal transfer relaxase TraI; Provisional.	2.34984e-72
NC_014664.1\|WP_013419516.1\|2063263_2063563_+\|BrnA-antitoxin-family-protein	gnl\|CDD\|373040	pfam14384, BrnA_antitoxin, BrnA antitoxin of type II toxin-antitoxin system. BrnA is family of antitoxins that neutralizes the toxin BrnT, pfam04365. It consists of 3 alpha-helices and a C-terminal ribbon-helix-helix DNA binding domain. As in other toxin-antitoxin systems, BrnA negatively autoregulates the brnTA operon and has higher affinity for the DNA operator when complexed with BrnT. It dimerizes with two molecules of its toxin BrnT.	4.16343e-22

>NC_014664.1|WP_155942411.1|2056511_2058245_-|hypothetical-protein
MGSSDTFDHVVLIETASNQHTIFQTNRLRENIGASELIYRVGTVFVDEAVKKLEPGSADIVVRASGKAIVLVRGRTNAEAIIRDVTLRTLLECPGVVARGAHAEIKGPSAKDLDNAIREAHRLVNEVASRLPPPQARFQRLPFVENCASSSYPAAALNWKASRDGNAPAHSEVIFARRDGKVRAEAHERIGKITKAPLAQSLDAFEEASEDGTIGDWIAIVHADGNGLGQVFLNFVDRIEKDASADDYVKALKGFSSAVDDWSRAAAGKAIEETWGDIKKKIEDREKTGKGRKYFLPVAPVVLGGDDLTVICEGERAVRFAAAYIRAFEDVSREALAGDLGKLVPNIGMDFVAVAAGIAIVKPHFPFHRAYELAEELTGSAKAAKKHFKEIPCSALDFQVVFDSSGGKLEPIRDRLILEDADKTKTSLTMRPYVVTPQERLEAATDEAKEWAERRHYSEGERSLLCAVAALLKKPDPDKERGDDAFLPRSQAHALREAIYLGRKVADGRLAQIHHRYPNFAWESLTGNSRSLFVDDGTWKDEEGNEHRLVGTYLLDAMDLADLAGQAALEPLAASDQ
>NC_014664.1|WP_013419508.1|2054121_2056515_-|hypothetical-protein
MTLQFSLSIEMISDWHIGSGQGRHGSIDRLIDRDRDDLPYIPAATVRGIWRDSAQLLARGLDDGVEDGPWSKLADRLFGSEPVLTPKRQDAPTPSLLTVDDARFPASLRAEFADASGDSATRAAGKKVLRQALTFIKPGVSIDPRSGTAKEDFLRFEEVARGGAVLEAKGIVDCPDADMRVVAAFLLGAAAMIERLGGKRRRGLGRCAVKLSFSNAGLPADATGAAAILGASDAPSLPNASNSGVEQRAFGSVQSGDWQKIPLRLKLLAPLVAADDVRGNVITCRDYIPSALLLAPIASRLAAAGLANIWTLIANGDVRILAATPEIDGGRGLPVPLCWEEEKAKKGEGVYRQIPRTASGENAQYVPIRAGFVGASEFHLRSVPKVIRTHNTIEDERQRPDETVGGVYTYEALAPGLTFRSEVWIRGGAVDSAALSGTVRLGRARQAGYGVVEIEPLGAASGASERKTRDGYVTIWLTSDAILPSVELDGGLKAIASAVARLLGSRADALFDLEGSWANLRWKRIDGWQSRWNLPRPTLVALQAGSVAELKLAKGVTIDAAKVEALEREGIGARKGEGFGCLLVNHAHLVNESSDMRQEKAKPGSFEDGNQPAGKREKDPQQEKYLNRIHRVAWERCIALRAEMAVSSEDARKELLGWTGAKPSMSQLGGLRAAMGTLTEKDIEFLQDWLKRLRDSKKWDGKAMDSLEELLKRTCEKTWPHEKIWQNLGLQGLDDERFLGAPRPATDGFDSTTHPELARFAVRTFILEAMRAHKRHGEKNGTADQDGATNNTNQEAA
>NC_014664.1|WP_013419507.1|2052436_2054125_-|hypothetical-protein
MSRHIARRVTVEGQLLCLTPLHVGGLDTPSSSDLPLAMNGEGKFYVPGTSLAGPLRAWCRETYPDTWMNLWGVGSQELPVAPDNESEEEKKARTKPDRASFVIVEDAIVEDGALAPEVRDGVGIDRYTGTAADKVKFDREVLPAGTRLFFHLVFEETAGEAENAKIVASLVHALQQGAVPLGASVSRGLGSVRLEKLEVNEQRFGRKEHALAALRGKGVPGGLEVLCADWEEQARDRPLIKIKIEWKPEGPLMVKSGVDGMAVDMLPLTSPKDGSLRLVLPGSSVKGALRSQAERIIATLLDPTEHPELRKNFLKQLARFQIVTDLFGAANASASGENENRHWLPGRSPLSVGDCFSTTEISPDVQKHMLSGASGADLRFWTEGLPELKWNDSGEPYLDPAAHVAIDRWLGGASDGALFSVLEPCNFSWNELEIVIDPARLPRRGEAGNTADALAAIALLLLTLADLVGGEIALGFGANRGLGTAKATELNLDVPAFDTHPDGFVRNVLEDLAGLTASIDGEEGKLRLDGGAVERLRKAWRAGIERLSRMESPANQQIGAAA
>NC_014664.1|WP_013419506.1|2051798_2052440_-|TIGR03984-family-CRISPR-associated-protein
MTEKLEYRQWRFENMTAAEALSYVGNSLGSEVSRGFVLSPEQACFCTLRGSGADVSLYGCDETAEGQALDPDLVFEFRLFGPNFDARWERTSGLTGELRICSDSSATGHEVQLKQPNDDVTEKGGEAVPYVIKRENRYLIWGEPVGKPGEGGTKLTSSRIGTLWVPVESSARVELTAYEYFGTAKYGNAVFVGERLTGLRAVADDGKKSGASQ
>NC_014664.1|WP_013419505.1|2049501_2051802_-|TIGR03986-family-CRISPR-associated-RAMP-protein
MTQFHNPYNFVPLGRKLEGLLGQEKPKGHDRYHRDLWSGRIEIEIETVTPLLIRDAARAEEHEDDAEHKTFGVRRGPDGRPLLPATSLKGALRSAFEVVTNSRFSVFEKHEKPPARRMAAGDGLAMVPARISDDGYNLEMLLGSHDGLTWGGARPTWNNDLGRWILPNDTLYAAWLPQYQKGTGGYDHTHGVQLNGGGWPKHAQAVSCWIELWAKGPFKYWRVRSIAAIGLSSNLRKPPASTQGYGQHRPVGGVAARLIQVNGWVVKTNQNFGKKHDERVFFSSSGSASHQVPLVTDWRDRYIDLVRDYHRTHKSDLEQRKRRKEPFDKFYGNEPGRTAWSRHVCNPDEARLNPGDLVYARIDRAGNIEGLYPVMISRELGQAAPERLLPHELHPATKSRELSPADRVFGWVNQQGAGAYKGQLRIHSVKCGTAAEEAVDKFDPALPLAILGAPKEAQARFYVGKPDGRAMPTNTNTAGGAYFEKGKDAHEKWNLRGRKVYPHHAATLSAKAKAAGYWDPEKAVEEAHYEPTISDEHIVDLEAPGAAYREYIRRRGLKRDKNGQLSETGNQDSQNRSITEWVRPGTKFTAAIDVVNLNIVELGVLLWLLDPPVKPRAFHRLGGGKPLGFGSARISITHVSLKTGAAKAADYRAFFGQPDYSGIEAPLTGGPTVAGAFIAKAEAAWGSAFVSLPNAQAFLQAARGYRDGLPTHYPRRDHYPNPAGENYKWFGENESGRKEEPRRRKGLRLSLPAITDDEGLPLDPTQ
>NC_014664.1|WP_013419504.1|2047138_2048239_-|CRISPR-associated-endonuclease-Cas1
MLSWGSFQRLFGSAPPPSDWPPPLSLEEEAEQDIRFSPAAAPVHVLSGAAVVRVNNSTLLVERPGEPVFERPIELVSTLHIHGWARVTGACIGRLTAQGATVVWRGLHGYPVALAQPMHGAGLDIRRAQYFEAAGERGLAIARALISAKIQNMRGLVRRRANIEGRDCLTALAALAKKAKHASRESLLGIEGSATAFYFSAWPHMFAARAGDVEFEVRSRRPPQNAVNATLSYAYAVLSAECVCALAAVGLDPRLGVFHQPRSGRASLALDLMEPFRPLIADQAVLTGFNTGQIRTGDAAEADDGWRLGETGKRTVIDLMEKRLTTAISVSGTEQQVSYREAIGRQARGIATALQTGAGFEALERP
>NC_014664.1|WP_013419503.1|2046848_2047142_-|CRISPR-associated-endonuclease-Cas2
MSKAAHLYLVAYDISCPRRWKRVQKVIKGLCRRSQLSVHFCRATPARIRRLENRLHRIMHDEEDRLMVIDLGPAHTQAQLSLLNPINDIADLKAAIL
>NC_014664.1|WP_013419502.1|2045952_2046834_-|RNA-directed-DNA-polymerase
MNSQAQSACCAGANQIVEGATLEKVVAPACLQQAWTRVRKNKGGPGGDGVTIEIFAQNAEVELEKLRAETLAGIYRPRKVRHAIVPKPKGGERKLTIPSVVDRILQTATMLSLGQTVDHHFSSASWAYREGRGVDDALADLRRLRNSGLFWTFDADIMQYFDRILHKRLIDDLFIWVDDLRIVRLIQLWLRSFSYWGRGIAQGAPISPLLANLFLHPMDRLLELEGLASVRYADDFVVLCRSKALAQKAQLIVASHLAARGLKLNMSKTRILAPSEAFIFLGQTVEPVWDTQP
>NC_014664.1|WP_081449440.1|2045203_2045956_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MMQRTQPVQAWRWSVSPPGPHLTATVPVMEAIRGAAIFMRREMGNGLFPESFHGADRGGHAHAFWLPEDEDGDGLIDHIWVSCASGMDARTIAALASVEWFRAEGVRYEVAPSWMGPRPLDGIFGPSAVWQGVTPYVTSRRRLTKTGKERADETPEAQLLRELLLRGLPAPVEIGWEPAAWCGEDNVLASQFAINWDKRGGPPADAVASFPAIVFAEPVPGPLAFGHAAHFGLGLLVPQIGSACNSLHIS
>NC_014664.1|WP_049779313.1|2044940_2045165_-|Fic-family-protein
MVFIHPFPNGNGRHARIMADMVLTRVYNQNPIHWSGGFDLQRMNERRLVYIAALRAADRGDLATLLAFACHGER
>NC_014664.1|WP_013419510.1|2059368_2059824_+|hypothetical-protein
MLVLLRDFLTSNDFTAFLNVIQLGGVLGIGATLWQMGRDREPIAIWVQSDDGRTKLIGTIPRRVLTRAEVTGWISMKAGRPRLDFTRFEPNYSFPDDKVVVPMTAADFELLEKPPHRPKRAPSKGRSFVRLTPSGGSRPRRIPRATRPCLQ
>NC_014664.1|WP_013419511.1|2059759_2060842_-|putative-CRISPR-associated-protein
MGRLIVGLTGISVAGREEYEPADSFSRRVRQRLRDEKAKDGARYYTVASAEINVLSKLGCSEEDHVLLLASDTPVGKACAELVRETVKNEFGAEGEVQPVPGLQMTDATLFRRDGVRNLFEKLRRAQAKAQELGLDFVLNMNGGFKSVLPFAALYGMTQQAPSYYSYEWTSTLIKLPALPLTFDWDRLGFAADALIALRDKGIMQAHEFEALLPGHGYRDDPLFRVLIEEDDGLVVPSAAGDLMFERLAFEASTSQVLLSPRAWRKAKGSGTEPATLEALAEIRDPLLRAKPGHCERYAGKTNLLIWKTTTGSWPRLFYWVERNGVHVAEILRHDEYDVATEGKGVWREEFDGDDFHRWE
>NC_014664.1|WP_013419512.1|2060853_2062020_-|TIGR02584-family-CRISPR-associated-protein
MRDASTFSRRILLCTVGLAPQIVTETLYALCMERTPPFLPTEIHVITTAQGEARTRQMLLNPPQEQLAKFEAEFGFPVAEALTVGRIHVVQADGVQLGDISTEAHNKALADLIIQTVHEVTRDDRAAIHFSIAGGRKTMGVLLGLAVSLFARPQDSLSHVLVEPQPLEQHPEFFFPPRIARDLEDKFNPGVPISTDKARIVLAEIPFVRLRQGLPMHLLEGAWSFTETVARAQAAVTSPELVIDRAAQKVSCQGIIFELTPMQFSLYSLLAKRRLCGMGSDGFVHWTEIGGDEFIAEIESLPLTTFHDLNRLRRDFAKIGDTKQEDPRPDKFEQAKARLNERIRERLGHFSPTYEVKSRKARSQSLLGLDLPVSAIRFGAVDDDSESN
>NC_014664.1|WP_013419513.1|2062012_2062384_-|hypothetical-protein
MAAFYTWFDIIAGFVTEQNIRIVTTYATFFLVAWNLAKTLRNNQKITIIAVNDRSGESLAVARIPRFQVTRSEVLGIMRLQAGGNQLDTSCFKWNDKIPRKARFHFPPSSFALLTGQKVAVNA
>NC_014664.1|WP_013419514.1|2062431_2062728_-|CRISPR-associated-protein-Csx16
MATYFVTRHEGAIDWALRKGIEAQLVTHLDPSKIEKGDVVLGTLPVQIIAQINERGARYLHLEMSLPADQRGIALTADDMERLGAQLIEYEARRISEN
>NC_014664.1|WP_013419515.1|2063019_2063286_+|BrnT-family-toxin
MVTIVWDEPKRQSNLAKHGLDFADLDEEFFLGALVVQARHERFQAIGRFADGTIAVVFAVLGSEGVSVISMRSASRRERMLYGKKTSL
>NC_014664.1|WP_013419516.1|2063263_2063563_+|BrnA-antitoxin-family-protein
MGKKHLSDAEEAFIQRQIASDPGNPEWTNEDFANAKPFAEAFPALAEKMRKNVGGRPKSDAPKVAVSLRLDQDVVDKFRATGAGWQTRINDVLRRAVGG
>NC_014664.1|WP_013419517.1|2064018_2065854_-|hypothetical-protein
MHFLSWSEVEAYKQWIGSAFGALTLIMLIGYRLRGYYRGVSFIKRVLLGPGDSHSEARAKMLLILRADFKSFFFSNANRFAAARKLVELEIINPADPEPNEYDFKSEQKYKEKIDAWRKQQQVREAEIVSDLRKVLSDPKTGFEGDGWDLKAEIFKFLQSPFRRSQSQGAKQNSVVLKSFKKLDDNRELIKRYFNVLGQMDPDAEKKFLTQTTIKFGYISPIFLLTGILNRFDDEDGWRLIIDRYRALVKDDRHYSIETRELRAFLFNCWLLWGPSISPCDCPEWQTEGLTTTLQYGYGDENQSIDLIFKDNDNGDFGALIRGRLSLKDPNIDPRIGFAPSAILAVPSVVQGRFKWGPDLGEDVVCAAQKLIRDPGRGRVVLECDPQGFRTKNPQKDTPTNDVSNYYTAYLWIMFVIQDGNGAPFFQEEEVYWKNLLVFFEHGNIADATTFHTLKKNLAAKVCSSLSEIFAREQALGRTLRIVYGGALDDTNCGHGNTLYPPARVAHLDDLPYEKDTQIIDIVSNLAMSTIDGSPLPRFLVLKRAVADGCLVLEGASKNGDHKSEFCSCQLPQVIENFYDKLGKSGSEGDLRKAQKDTAQNKTVSHEEFVG
>NC_014664.1|WP_013419518.1|2066082_2067030_-|hypothetical-protein
MSPAVTGVGKQVAGISGKFGFTSDTGLKIDATIEADDLFEEFYADYDKAFVLENEKETFEGFVRCFALNGGETYAQLALRYGPFREFALVARDPSTGARIGGANFTVFLLPASASGGVQTVSINLNYIFINLSERKRGKFRRLVSDLPDIAMRLFQQTNPDDALRETRSQLPIFIEQNDPFRMSPDQYDRDTSLTGVDQISRIKIWASLGARIVDTPYVQPPLSADQAPDTTLVYAVLGLEDETVGTCLLSAHLERFFSISVLKGKDASTDGCANAQITELRAKCLRGEKVPLLPGSDFLARGTDSNVKFASREQ
>NC_014664.1|WP_013419519.1|2067319_2069122_-|relaxase/mobilization-nuclease-domain-containing-protein
MIAKRVKRGVASSYTGLATYILGPKGARRKEVIERLSDYILDKAGAGGRVGGIRITNCGTDEPDWALSDIIATQKQNTRASADKTYHLVVSFADNERPGDEVLEKIEERLVSAIGLEAHQRMSAVHIDTDHLHMHIAINKIHPTKFRGRSTDPQPIEVTRAFRADLQKSGVGIAMLDGAADWQEVHRRFEARKLALRQRGAGLCIEDETGRRVRASTVDRAFGIGQFVKRFGPFQGDGQTFAPGHVNRATRRDPVYDRLWTQYHLDRIRKRRAREKELQRIRKDANDAFQPVLDKYKRLRSRSANKRPPEGRMDHLKRLREEMTRRAREIAHEMSDRQDVVSRAWPRWSFDDYLAHVAQQGDGQALALLQRRSREREALNTAFTWAPSGADARRIVYSHLKPYVLKNGSSIYYLRDGGKAIDSADRIYVPEVSLQAAYLAIDLGATRFGGQPLRIEGTAEFKAAVVKAAAVSGLQITLEDRSLEAQRQAALAERQDILDDYIARRNEHAARSPGFPPHRPFCPTDRGPFVYRGRRTLPPGDRAPARRQLYRQARHPAGSRGVRETDARGDLATARTDHRETPRLVEMTADTDEEVWFLPR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014664_1	1.39\|1354843\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354843-1354876	34	LR743530	Xanthomonas phage Suba genome assembly, chromosome: 1	28057-28090	4	0.882
NC_014664_1	1.73\|1357095\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1357095-1357128	34	MW145138	Providencia phage Kokobel2, complete genome	16980-17013	4	0.882
NC_014664_2	2.10\|1636577\|27\|NC_014664\|CRT	1636577-1636603	27	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	194748-194774	5	0.815
NC_014664_3	3.8\|2049164\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2049164-2049195	32	NC_010811	Ralstonia phage RSL1, complete genome	226294-226325	6	0.812
NC_014664_3	3.8\|2049164\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2049164-2049195	32	AB366653	Ralstonia phage RSL1 DNA, complete genome	226294-226325	6	0.812
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	574557-574590	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1132430-1132463	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1539415-1539448	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	809259-809292	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1161614-1161647	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1314576-1314609	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1727914-1727947	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1516863-1516896	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	191134-191167	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	894694-894727	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	964270-964303	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1007212-1007245	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	964270-964303	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1007212-1007245	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	964270-964303	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	964274-964307	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1007212-1007245	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1007212-1007245	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1007212-1007245	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1177946-1177979	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	964270-964303	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1007214-1007247	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1092696-1092729	7	0.794
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1092696-1092729	7	0.794
NC_014664_1	1.55\|1355906\|33\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1355906-1355938	33	NZ_CP031163	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence	152582-152614	7	0.788
NC_014664_3	3.6\|2049027\|33\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2049027-2049059	33	NZ_CP039693	Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence	37793-37825	7	0.788
NC_014664_3	3.9\|2049232\|33\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2049232-2049264	33	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	848022-848054	7	0.788
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	EU307292	Burkholderia phage Bups phi1 clone 2 partial sequence	17478-17511	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1745429-1745462	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1527122-1527155	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	894009-894042	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	967265-967298	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	986058-986091	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	909443-909476	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	885482-885515	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	140976-141009	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	973098-973131	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	691060-691093	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	897597-897630	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	799617-799650	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	896202-896235	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1272539-1272572	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1093103-1093136	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	973087-973120	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1272506-1272539	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1271311-1271344	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	986104-986137	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	859713-859746	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1271348-1271381	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	859736-859769	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1271348-1271381	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1067775-1067808	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1271337-1271370	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	859736-859769	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	898995-899028	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	879679-879712	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	927623-927656	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1271337-1271370	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	859736-859769	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1200069-1200102	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1272504-1272537	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	859736-859769	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	859736-859769	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1271348-1271381	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1271359-1271392	8	0.765
NC_014664_1	1.29\|1354179\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354179-1354212	34	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1271337-1271370	8	0.765
NC_014664_1	1.35\|1354578\|35\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354578-1354612	35	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	14826-14860	8	0.771
NC_014664_1	1.37\|1354711\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354711-1354744	34	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	886832-886865	8	0.765
NC_014664_1	1.37\|1354711\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354711-1354744	34	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	665632-665665	8	0.765
NC_014664_1	1.37\|1354711\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354711-1354744	34	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	886832-886865	8	0.765
NC_014664_1	1.37\|1354711\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354711-1354744	34	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	874105-874138	8	0.765
NC_014664_2	2.4\|1636247\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	1636247-1636280	34	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	459300-459333	8	0.765
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP024267	Escherichia coli O6:H16 strain F6699 plasmid unnamed1	15653-15686	8	0.765
NC_014664_4	4.7\|2059097\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2059097-2059128	32	NC_017078	Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence	282628-282659	8	0.75
NC_014664_1	1.27\|1354046\|35\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354046-1354080	35	NC_007491	Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence	5885-5919	9	0.743
NC_014664_1	1.27\|1354046\|35\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354046-1354080	35	NZ_CP050125	Rhodococcus erythropolis strain KB1 plasmid plas1, complete sequence	235108-235142	9	0.743
NC_014664_1	1.37\|1354711\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354711-1354744	34	MH593833	Siphoviridae sp. isolate ctbb6, complete genome	29974-30007	9	0.735
NC_014664_1	1.43\|1355107\|33\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1355107-1355139	33	NC_047708	Uncultured phage_MedDCM-OCT-S39-C11 DNA, complete genome, group G9, isolate: uvMED-CGR-U-MedDCM-OCT-S39-C11	2086-2118	9	0.727
NC_014664_1	1.49\|1355507\|36\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1355507-1355542	36	MK291444	Paracoccus phage vB_PthS_Pthi1, complete genome	37458-37493	9	0.75
NC_014664_1	1.60\|1356236\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1356236-1356269	34	NZ_CP042264	Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence	302516-302549	9	0.735
NC_014664_3	3.5\|2048959\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048959-2048990	32	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	203361-203392	9	0.719
NC_014664_3	3.5\|2048959\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048959-2048990	32	NZ_CP022365	Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence	135098-135129	9	0.719
NC_014664_3	3.5\|2048959\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048959-2048990	32	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	622715-622746	9	0.719
NC_014664_3	3.5\|2048959\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048959-2048990	32	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	354752-354783	9	0.719
NC_014664_3	3.5\|2048959\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048959-2048990	32	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	190889-190920	9	0.719
NC_014664_3	3.5\|2048959\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048959-2048990	32	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	387770-387801	9	0.719
NC_014664_3	3.5\|2048959\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048959-2048990	32	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	537311-537342	9	0.719
NC_014664_3	3.7\|2049096\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2049096-2049127	32	NZ_CP020851	Klebsiella variicola strain KPN1481 plasmid pKPN1481-2, complete sequence	27596-27627	9	0.719
NC_014664_3	3.7\|2049096\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2049096-2049127	32	NZ_CP020851	Klebsiella variicola strain KPN1481 plasmid pKPN1481-2, complete sequence	158896-158927	9	0.719
NC_014664_3	3.7\|2049096\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2049096-2049127	32	NZ_CP017935	Klebsiella pneumoniae strain CAV1016 plasmid pCAV1016-90, complete sequence	83075-83106	9	0.719
NC_014664_3	3.7\|2049096\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2049096-2049127	32	NZ_CP021741	Klebsiella pneumoniae strain AR_0126 plasmid tig00000001, complete sequence	86839-86870	9	0.719
NC_014664_1	1.15\|1353247\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1353247-1353280	34	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1210080-1210113	10	0.706
NC_014664_1	1.44\|1355172\|35\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1355172-1355206	35	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	134295-134329	10	0.714
NC_014664_1	1.44\|1355172\|35\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1355172-1355206	35	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	593894-593928	10	0.714
NC_014664_1	1.60\|1356236\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1356236-1356269	34	MH622911	Microviridae sp. isolate ctbd923, complete genome	802-835	10	0.706
NC_014664_2	2.4\|1636247\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	1636247-1636280	34	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	955076-955109	10	0.706
NC_014664_3	3.2\|2048752\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048752-2048783	32	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	796754-796785	10	0.688
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	CP026844	Shigella boydii strain NCTC 9733 plasmid unnamed, complete sequence	76121-76154	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP024469	Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence	127785-127818	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	105657-105690	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	63941-63974	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026099	Shigella flexneri strain FDAARGOS_74 plasmid unnamed	219856-219889	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026806	Shigella dysenteriae strain 2017C-4522 plasmid unnamed, complete sequence	30498-30531	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026833	Shigella dysenteriae strain ATCC 49346 plasmid unnamed, complete sequence	135758-135791	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026763	Shigella boydii strain NCTC 9850 plasmid unnamed	27802-27835	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP012138	Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence	80449-80482	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP044160	Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence	95590-95623	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	159661-159694	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026796	Shigella boydii strain ATCC BAA-1247 plasmid unnamed	25447-25480	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	158326-158359	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NC_002698	Shigella flexneri 5a virulence plasmid pWR501, complete sequence	155390-155423	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NC_007607	Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence	62890-62923	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP007038	Shigella flexneri G1663 plasmid pG1663, complete sequence	160087-160120	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NC_022899	Shigella dysenteriae 1617 plasmid pSLG231, complete sequence	60668-60701	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	159198-159231	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026779	Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence	144939-144972	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	27445-27478	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	123817-123850	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP020343	Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence	80466-80499	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	176895-176928	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	160999-161032	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026783	Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence	66713-66746	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	CP026798	Shigella boydii strain NCTC 9353 plasmid unnamed, complete sequence	70706-70739	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	CP054891	Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence	11954-11987	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026813	Shigella boydii strain 83-578 plasmid unnamed, complete sequence	231-264	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	196560-196593	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP034059	Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence	96608-96641	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP024476	Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence	124232-124265	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	1782-1815	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	173413-173446	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	130513-130546	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026837	Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence	41419-41452	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026775	Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence	163348-163381	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026781	Shigella dysenteriae strain 53-3937 plasmid unnamed	11704-11737	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP045785	Shigella dysenteriae strain CFSAN029786 plasmid p1CFSAN029786, complete sequence	156324-156357	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	147516-147549	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	188173-188206	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP037924	Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence	147368-147401	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026841	Shigella dysenteriae strain ATCC 9753 plasmid unnamed, complete sequence	185633-185666	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026879	Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence	24602-24635	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP026785	Shigella dysenteriae strain 80-547 plasmid unnamed	79091-79124	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NZ_CP027028	Shigella dysenteriae strain E670/74 plasmid unnamed, complete sequence	121464-121497	10	0.706
NC_014664_3	3.3\|2048820\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2048820-2048853	34	NC_010660	Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence	163730-163763	10	0.706
NC_014664_4	4.3\|2058822\|34\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2058822-2058855	34	NZ_CP014310	Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence	347445-347478	10	0.706
NC_014664_4	4.4\|2058892\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2058892-2058923	32	NZ_CP020909	Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence	422777-422808	10	0.688
NC_014664_4	4.4\|2058892\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2058892-2058923	32	NZ_CP013529	Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence	337993-338024	10	0.688
NC_014664_4	4.4\|2058892\|32\|NC_014664\|PILER-CR,CRISPRCasFinder,CRT	2058892-2058923	32	NZ_CP013582	Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence	337993-338024	10	0.688
NC_014664_1	1.15\|1353247\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1353247-1353280	34	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	316249-316282	11	0.676
NC_014664_1	1.20\|1353577\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1353577-1353610	34	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	274323-274356	11	0.676
NC_014664_1	1.31\|1354312\|35\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354312-1354346	35	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	30594-30628	11	0.686
NC_014664_1	1.32\|1354379\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354379-1354412	34	NZ_CP019603	Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence	452220-452253	11	0.676
NC_014664_1	1.33\|1354445\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1354445-1354478	34	NZ_CP019603	Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence	452220-452253	11	0.676
NC_014664_1	1.42\|1355041\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1355041-1355074	34	MG945836	UNVERIFIED: Microviridae sp. isolate 1972-1502, complete genome	2919-2952	11	0.676
NC_014664_1	1.54\|1355840\|34\|NC_014664\|CRISPRCasFinder,CRT,PILER-CR	1355840-1355873	34	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3839379-3839412	11	0.676

1. spacer 1.39|1354843|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to LR743530 (Xanthomonas phage Suba genome assembly, chromosome: 1) position: , mismatch: 4, identity: 0.882

ctcgcgatggccgcgattaaacaggcgttgcaat	CRISPR spacer
ttcgcgatggccgcgattgaacaggcgttgcata	Protospacer
.*****************.*************

2. spacer 1.73|1357095|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to MW145138 (Providencia phage Kokobel2, complete genome) position: , mismatch: 4, identity: 0.882

gtgatgatgaaaccccttggtgcgcgacgttcgt	CRISPR spacer
aagatgatgaaaccccttggtgcgcggcgtttgt	Protospacer
. ************************.****.**

3. spacer 2.10|1636577|27|NC_014664|CRT matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

gagaaagagatttggcgcttcatgtga	CRISPR spacer
gcagtagagatttggcgcttcatttga	Protospacer
* .. ****************** ***

4. spacer 3.8|2049164|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NC_010811 (Ralstonia phage RSL1, complete genome) position: , mismatch: 6, identity: 0.812

gagaattcgtccaccgtcttggcttcacgcag	CRISPR spacer
gtgacgccgtccaccgtctttgcttcacgccg	Protospacer
* **  .************* ********* *

5. spacer 3.8|2049164|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to AB366653 (Ralstonia phage RSL1 DNA, complete genome) position: , mismatch: 6, identity: 0.812

gagaattcgtccaccgtcttggcttcacgcag	CRISPR spacer
gtgacgccgtccaccgtctttgcttcacgccg	Protospacer
* **  .************* ********* *

6. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgt-ctgcccggcg	CRISPR spacer
ggcgacctcgggcacctcgaccgtgccgtccacc-	Protospacer
****** ******* ********* *.*.**. *

7. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

8. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

9. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

10. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

11. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

12. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

13. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

14. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

15. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

16. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

17. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

18. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

19. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

20. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

21. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

22. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

23. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

24. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

25. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

26. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

27. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

28. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

29. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.794

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-cacgccgc	Protospacer
  ************.******** ** * ** **

30. spacer 1.55|1355906|33|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031163 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence) position: , mismatch: 7, identity: 0.788

aacagcct-gtcgccatagaggttgagcagccgc	CRISPR spacer
-gcgacttggtcgccatagagattcagcagccgc	Protospacer
 .*..*.* ************.** *********

31. spacer 3.6|2049027|33|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039693 (Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence) position: , mismatch: 7, identity: 0.788

----cgatgacatcgtcggacttcatcacccctccgc	CRISPR spacer
cccccgata----cgtcgggcatcatcacccctccgc	Protospacer
    ****.    ******.* ***************

32. spacer 3.9|2049232|33|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

aggcggggcctcgtcaacaccgccgcgatgacc	CRISPR spacer
gttcaggttctcgtcaacaacgccgcgatgacc	Protospacer
.  *.** .********** *************

33. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to EU307292 (Burkholderia phage Bups phi1 clone 2 partial sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg	CRISPR spacer
cacccagtcgggaatctcgaccgtctgcccggcg	Protospacer
 .*   .***** * *******************

34. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

35. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

36. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

37. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

38. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

39. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

40. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

41. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

42. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

43. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

44. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

45. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

46. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

47. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

48. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

49. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

50. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

51. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

52. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

53. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

54. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

55. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

56. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

57. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

58. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

59. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

60. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

61. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

62. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

63. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

64. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

65. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

66. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

67. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

68. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

69. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

70. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

71. spacer 1.29|1354179|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgacatcgggcaactcgaccgtctgcccggcg-	CRISPR spacer
ttcgacatcgggcagctcgaccggct-caagccgc	Protospacer
  ************.******** ** *  * **

72. spacer 1.35|1354578|35|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 8, identity: 0.771

-atcagtttgccctccgcttggcttcttcttctcgc	CRISPR spacer
caacag-atgccctccgatcggcttcttcttctgaa	Protospacer
 * ***  ********* *.************* .

73. spacer 1.37|1354711|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 8, identity: 0.765

acgccaagctgatcgaacggataggcctcgccac	CRISPR spacer
tcggcgtgctgatcgaacggattggcctcgcttt	Protospacer
 ** *. *************** ********. .

74. spacer 1.37|1354711|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 8, identity: 0.765

acgccaagctgatcgaacggataggcctcgccac	CRISPR spacer
tcggcgtgctgatcgaacggattggcctcgcttt	Protospacer
 ** *. *************** ********. .

75. spacer 1.37|1354711|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 8, identity: 0.765

acgccaagctgatcgaacggataggcctcgccac	CRISPR spacer
tcggcgtgctgatcgaacggattggcctcgcttt	Protospacer
 ** *. *************** ********. .

76. spacer 1.37|1354711|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 8, identity: 0.765

acgccaagctgatcgaacggataggcctcgccac	CRISPR spacer
tcggcgtgctgatcgaacggattggcctcgcttt	Protospacer
 ** *. *************** ********. .

77. spacer 2.4|1636247|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 8, identity: 0.765

atctatacgtcgacggacgggggcgcgacgtggg	CRISPR spacer
agatgtacgtcgacggccggtggcgcgacgcgac	Protospacer
*  *.*********** *** *********.*.

78. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024267 (Escherichia coli O6:H16 strain F6699 plasmid unnamed1) position: , mismatch: 8, identity: 0.765

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattgaaaaagaaaagct	Protospacer
* *****.****************** *   * .

79. spacer 4.7|2059097|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NC_017078 (Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence) position: , mismatch: 8, identity: 0.75

ccattttccgcgacagcatacggcctgatcgc-	CRISPR spacer
gcattttccccgtcagcatacgg-cggacaaca	Protospacer
 ******** ** ********** * **. .*

80. spacer 1.27|1354046|35|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NC_007491 (Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence) position: , mismatch: 9, identity: 0.743

acgcttggcctcctgatcctctgccgcgacggctc	CRISPR spacer
ctgattggcatcctgatcatctgccgcgagcgcgg	Protospacer
 .* ***** ******** **********  **

81. spacer 1.27|1354046|35|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050125 (Rhodococcus erythropolis strain KB1 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.743

acgcttggcctcctgatcctctgccgcgacggctc	CRISPR spacer
ctgattggcatcctgatcatctgccgcgagcgcgg	Protospacer
 .* ***** ******** **********  **

82. spacer 1.37|1354711|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to MH593833 (Siphoviridae sp. isolate ctbb6, complete genome) position: , mismatch: 9, identity: 0.735

acgccaagctgatcgaacggataggcctcgccac	CRISPR spacer
gcatcaagctgatcgagcggatagggctggagag	Protospacer
.*..************.******** ** *  *

83. spacer 1.43|1355107|33|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NC_047708 (Uncultured phage_MedDCM-OCT-S39-C11 DNA, complete genome, group G9, isolate: uvMED-CGR-U-MedDCM-OCT-S39-C11) position: , mismatch: 9, identity: 0.727

gcagtcgtggcgatgtacatgggcaccaccaca	CRISPR spacer
gtttgggaagcgacgtacatgggcaacaccaca	Protospacer
*.    * .****.*********** *******

84. spacer 1.49|1355507|36|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to MK291444 (Paracoccus phage vB_PthS_Pthi1, complete genome) position: , mismatch: 9, identity: 0.75

accagaagaaccgcgccggacgccgcgccgtcgcgc	CRISPR spacer
gcgctgccaaccgcgccgggtgccgcgccgtcgcgc	Protospacer
.*   .  ***********..***************

85. spacer 1.60|1356236|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042264 (Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.735

tgcattcagcgcggcaagctcctgaggcgacaag	CRISPR spacer
cgcattcagcgcggcaaccacctgaccccgcgtg	Protospacer
.**************** * *****  * .*. *

86. spacer 3.5|2048959|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.719

cggatttggtcaccggtggagccggttgcaaa	CRISPR spacer
tgatcgtggtcaccggtggggccggtttcatc	Protospacer
.*. . *************.******* **

87. spacer 3.5|2048959|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022365 (Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence) position: , mismatch: 9, identity: 0.719

cggatttggtcaccggtggagccggttgcaaa	CRISPR spacer
gcgtgctggtcaccggtggagccggctacatc	Protospacer
  *  .*******************.*.**

88. spacer 3.5|2048959|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 9, identity: 0.719

cggatttggtcaccggtggagccggttgcaaa	CRISPR spacer
tgatcgtggtcaccggtggggccggtttcatc	Protospacer
.*. . *************.******* **

89. spacer 3.5|2048959|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 9, identity: 0.719

cggatttggtcaccggtggagccggttgcaaa	CRISPR spacer
tgatcgtggtcaccggtggggccggtttcatc	Protospacer
.*. . *************.******* **

90. spacer 3.5|2048959|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.719

cggatttggtcaccggtggagccggttgcaaa	CRISPR spacer
tgatcgtggtcaccggtggggccggtttcatc	Protospacer
.*. . *************.******* **

91. spacer 3.5|2048959|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.719

cggatttggtcaccggtggagccggttgcaaa	CRISPR spacer
tgatcgtggtcaccggtggggccggtttcatc	Protospacer
.*. . *************.******* **

92. spacer 3.5|2048959|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 9, identity: 0.719

cggatttggtcaccggtggagccggttgcaaa	CRISPR spacer
tgatcgtggtcaccggtggggccggtttcatc	Protospacer
.*. . *************.******* **

93. spacer 3.7|2049096|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020851 (Klebsiella variicola strain KPN1481 plasmid pKPN1481-2, complete sequence) position: , mismatch: 9, identity: 0.719

tacgaatacgaacgggcttgccaatgttggaa	CRISPR spacer
tctgaatacgaacgggtttggcaatggcaaca	Protospacer
* .*************.*** ***** ... *

94. spacer 3.7|2049096|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020851 (Klebsiella variicola strain KPN1481 plasmid pKPN1481-2, complete sequence) position: , mismatch: 9, identity: 0.719

tacgaatacgaacgggcttgccaatgttggaa	CRISPR spacer
tctgaatacgaacgggtttggcaatggcaaca	Protospacer
* .*************.*** ***** ... *

95. spacer 3.7|2049096|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017935 (Klebsiella pneumoniae strain CAV1016 plasmid pCAV1016-90, complete sequence) position: , mismatch: 9, identity: 0.719

tacgaatacgaacgggcttgccaatgttggaa	CRISPR spacer
tctgaatacgaacgggtttggcaatggcaaca	Protospacer
* .*************.*** ***** ... *

96. spacer 3.7|2049096|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021741 (Klebsiella pneumoniae strain AR_0126 plasmid tig00000001, complete sequence) position: , mismatch: 9, identity: 0.719

tacgaatacgaacgggcttgccaatgttggaa	CRISPR spacer
tctgaatacgaacgggtttggcaatggcaaca	Protospacer
* .*************.*** ***** ... *

97. spacer 1.15|1353247|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 10, identity: 0.706

tgataccgccgctcatgccgccagcctcatgacg	CRISPR spacer
tccggcaaccgctcatgccgccagccccgtgaac	Protospacer
*   .* .******************.*.***

98. spacer 1.44|1355172|35|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 10, identity: 0.714

tccgacaaggcgcgcgccgtcatcgttgtgcgctc	CRISPR spacer
tccgacaaggcgcgcggcgtcaccgcccaggccat	Protospacer
**************** *****.**..  *  * .

99. spacer 1.44|1355172|35|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 10, identity: 0.714

tccgacaaggcgcgcgccgtcatcgttgtgcgctc	CRISPR spacer
tccgacaaggcgcgcggcgtcaccgcccaggccat	Protospacer
**************** *****.**..  *  * .

100. spacer 1.60|1356236|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to MH622911 (Microviridae sp. isolate ctbd923, complete genome) position: , mismatch: 10, identity: 0.706

tgcattcagcgcggcaagctcctgaggcgacaag	CRISPR spacer
cgcattctgcgcggcaagctgctgaatacccgcg	Protospacer
.****** ************ ****.    *. *

101. spacer 2.4|1636247|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.706

atctatacgtcgacggacgggggcgcgacgtggg	CRISPR spacer
gtgtggcgctcgaccgacggcggcgcgacgtgga	Protospacer
.* *.    ***** ***** ************.

102. spacer 3.2|2048752|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 10, identity: 0.688

gtttttcacggctttcgtgcgccgtgtttcat	CRISPR spacer
acgtcaaccggctttcgtgagccgggtttcaa	Protospacer
.. *.   *********** **** ******

103. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to CP026844 (Shigella boydii strain NCTC 9733 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

104. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024469 (Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

105. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

106. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

107. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026099 (Shigella flexneri strain FDAARGOS_74 plasmid unnamed) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

108. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026806 (Shigella dysenteriae strain 2017C-4522 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

109. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026833 (Shigella dysenteriae strain ATCC 49346 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

110. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026763 (Shigella boydii strain NCTC 9850 plasmid unnamed) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

111. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012138 (Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

112. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044160 (Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

113. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

114. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026796 (Shigella boydii strain ATCC BAA-1247 plasmid unnamed) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

115. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

116. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NC_002698 (Shigella flexneri 5a virulence plasmid pWR501, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

117. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NC_007607 (Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

118. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007038 (Shigella flexneri G1663 plasmid pG1663, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

119. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NC_022899 (Shigella dysenteriae 1617 plasmid pSLG231, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

120. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

121. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026779 (Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

122. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

123. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

124. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020343 (Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

125. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

126. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NC_004851 (Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

127. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026783 (Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

128. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to CP026798 (Shigella boydii strain NCTC 9353 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

129. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to CP054891 (Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

130. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026813 (Shigella boydii strain 83-578 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

131. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

132. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034059 (Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

133. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024476 (Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

134. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

135. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

136. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

137. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026837 (Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

138. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026775 (Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

139. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026781 (Shigella dysenteriae strain 53-3937 plasmid unnamed) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

140. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045785 (Shigella dysenteriae strain CFSAN029786 plasmid p1CFSAN029786, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

141. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

142. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

143. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037924 (Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

144. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026841 (Shigella dysenteriae strain ATCC 9753 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

145. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026879 (Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

146. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026785 (Shigella dysenteriae strain 80-547 plasmid unnamed) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

147. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027028 (Shigella dysenteriae strain E670/74 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

148. spacer 3.3|2048820|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NC_010660 (Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence) position: , mismatch: 10, identity: 0.706

cagaacaacaggatgggattgaaaaatatctgac	CRISPR spacer
ctgaacagcaggatgggattggaaaagcaaagct	Protospacer
* *****.*************.****     * .

149. spacer 4.3|2058822|34|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014310 (Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

tcgcgactccgcataccagtaagataatcatcgc	CRISPR spacer
gcgcgactccggataccagtaagttagatagaaa	Protospacer
 ********** *********** **. .*  .

150. spacer 4.4|2058892|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020909 (Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence) position: , mismatch: 10, identity: 0.688

ttcaacagcatcgatatcgcgccaaataaaat	CRISPR spacer
gagaaaagcatcgatatcgcgcgaaacgagca	Protospacer
   ** **************** ***..*.

151. spacer 4.4|2058892|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013529 (Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence) position: , mismatch: 10, identity: 0.688

ttcaacagcatcgatatcgcgccaaataaaat	CRISPR spacer
gagaaaagcatcgatatcgcgcgaaacgagca	Protospacer
   ** **************** ***..*.

152. spacer 4.4|2058892|32|NC_014664|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013582 (Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence) position: , mismatch: 10, identity: 0.688

ttcaacagcatcgatatcgcgccaaataaaat	CRISPR spacer
gagaaaagcatcgatatcgcgcgaaacgagca	Protospacer
   ** **************** ***..*.

153. spacer 1.15|1353247|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 11, identity: 0.676

tgataccgccgctcatgccgccagcctcatgacg	CRISPR spacer
cgccgccgcctctcataccgccagcctcaccgga	Protospacer
.* ..***** *****.************. . .

154. spacer 1.20|1353577|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 11, identity: 0.676

aagctgctggtgggcggaaagaccggcgccttcg	CRISPR spacer
cggctgccggtgggcggaaggaccggtctggttc	Protospacer
 .*****.***********.******. .  *.

155. spacer 1.31|1354312|35|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 11, identity: 0.686

cccttggatcgcgattttctcatgtggcggataat	CRISPR spacer
aacgccgagcgcgattttctcgtgtggcggacgca	Protospacer
  * . ** ************.*********..

156. spacer 1.32|1354379|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019603 (Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence) position: , mismatch: 11, identity: 0.676

tctttggaaatgacgcaatccgccctcgccgcca	CRISPR spacer
accgccattctggcgcaatccgccctccccgcca	Protospacer
 *. . .   **.************** ******

157. spacer 1.33|1354445|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019603 (Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence) position: , mismatch: 11, identity: 0.676

tctttggaaatgacgcaatccgccctcgccgcca	CRISPR spacer
accgccattctggcgcaatccgccctccccgcca	Protospacer
 *. . .   **.************** ******

158. spacer 1.42|1355041|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to MG945836 (UNVERIFIED: Microviridae sp. isolate 1972-1502, complete genome) position: , mismatch: 11, identity: 0.676

acgttgaaggtcttgtctgcgtcttcgccgtcgt	CRISPR spacer
ctcatcccggtcttgtctgcggcgtcgccgtctc	Protospacer
 .  *   ************* * ******** .

159. spacer 1.54|1355840|34|NC_014664|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 11, identity: 0.676

cacttcagcggctgcaagaggatgtgctcaggcg	CRISPR spacer
gccgacagcgggtgcaggaggatgtgctcgcaga	Protospacer
  *  ****** ****.************. . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

357031 : 481874

uncultured_Mediterranean_phage(14.71%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013418003.1\|357031_357670_-\|protease	TIGR02281 family clan AA aspartic protease	NA	NA	NA	NA
WP_013418004.1\|357720_358431_-\|protease	TIGR02281 family clan AA aspartic protease	NA	NA	NA	NA
WP_013418005.1\|358598_360482_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	6.6e-104	39.5
WP_013418006.1\|360742_362836_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.6e-36	36.2
WP_013418007.1\|363061_363400_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_013418008.1\|363478_363715_-	BolA family transcriptional regulator	NA	NA	NA	NA
WP_155942527.1\|363916_365914_-	glycosyltransferase family 2 protein	A0A285PWC6	Cedratvirus	7.4e-53	42.4
WP_155942528.1\|366096_366888_+	hypothetical protein	NA	NA	NA	NA
WP_013418011.1\|366951_368748_-	sel1 repeat family protein	NA	NA	NA	NA
WP_169309498.1\|368752_370006_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_013418013.1\|370121_372395_-	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	1.9e-33	29.1
WP_013418014.1\|372488_374993_-	hypothetical protein	NA	NA	NA	NA
WP_013418015.1\|375503_376724_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_013418016.1\|377268_378888_+	methyltransferase domain-containing protein	A0A0N9QZQ5	Chrysochromulina_ericina_virus	1.3e-07	39.5
WP_049779570.1\|379823_380438_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.6e-25	42.7
WP_013418018.1\|380624_381710_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_013418019.1\|381820_383695_+	peptidoglycan DD-metalloendopeptidase family protein	Q8SBN9	Clostridium_phage	6.1e-17	35.9
WP_013418020.1\|383920_385438_-	malonyl-CoA synthase	A0A2H4PQM9	Staphylococcus_phage	4.5e-34	31.2
WP_013418021.1\|386046_386379_-	EamA family transporter	NA	NA	NA	NA
WP_013418022.1\|386375_386804_-	hypothetical protein	NA	NA	NA	NA
WP_013418023.1\|386867_387425_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_013418024.1\|387662_388352_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_013418025.1\|388372_389329_-	DUF2236 domain-containing protein	NA	NA	NA	NA
WP_013418026.1\|389595_391056_+	trigger factor	NA	NA	NA	NA
WP_013418027.1\|391311_391956_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.4e-60	58.4
WP_013418028.1\|392236_393505_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	8.3e-135	60.4
WP_013418030.1\|393761_396200_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.0e-197	48.1
WP_041787993.1\|396274_396736_-	cupin domain-containing protein	A0A291AU44	Pandoravirus	5.7e-25	43.2
WP_041787995.1\|397171_398182_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_013418033.1\|398374_398854_+	Hsp20 family protein	A0A1B1IW69	uncultured_Mediterranean_phage	4.7e-22	40.0
WP_013418034.1\|398880_400212_-	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_013418035.1\|400174_400975_-	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_013418036.1\|401175_401592_+	SET domain-containing protein	NA	NA	NA	NA
WP_013418037.1\|401753_402362_+	hypothetical protein	NA	NA	NA	NA
WP_013418038.1\|402643_404398_-	SPOR domain-containing protein	B6DZZ7	Stx2-converting_phage	1.0e-26	32.4
WP_037233862.1\|404975_405305_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.3e-15	43.6
WP_013418040.1\|405313_407674_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.3e-178	44.4
WP_013418041.1\|408603_409323_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_013418042.1\|409333_409672_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_013418043.1\|409836_414633_+	NAD-glutamate dehydrogenase	NA	NA	NA	NA
WP_013418044.1\|414718_415108_+	reactive intermediate/imine deaminase	NA	NA	NA	NA
WP_013418045.1\|415449_415701_+	hypothetical protein	NA	NA	NA	NA
WP_155942320.1\|415801_416296_+	hypothetical protein	NA	NA	NA	NA
WP_013418047.1\|416336_416762_+	hypothetical protein	NA	NA	NA	NA
WP_013418048.1\|417043_419221_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_013418049.1\|419411_419741_+	thioredoxin	A0A1J0GW78	Streptomyces_phage	1.5e-16	41.5
WP_013418050.1\|420085_421678_+	Do family serine endopeptidase	A0A1B1IT49	uncultured_Mediterranean_phage	1.3e-23	29.6
WP_013418051.1\|421941_422916_+\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_013418052.1\|423204_424482_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_013418053.1\|424508_425345_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.7e-51	44.3
WP_013418054.1\|425416_427045_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.2e-156	52.2
WP_013418055.1\|427169_427529_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_013418056.1\|427836_428469_+	isochorismatase family protein	NA	NA	NA	NA
WP_013418057.1\|428511_429021_-	hypothetical protein	NA	NA	NA	NA
WP_013418058.1\|429102_429885_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_041787192.1\|430067_431963_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_013418060.1\|432035_433553_+	anthranilate synthase component I	S4VNU7	Pandoravirus	1.4e-35	38.3
WP_013418061.1\|433575_434142_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_013418062.1\|434141_434774_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	3.8e-56	52.1
WP_013418063.1\|434782_435883_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	4.3e-55	36.7
WP_013418064.1\|435886_436708_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	5.2e-61	50.6
WP_013418065.1\|436704_437175_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_049779172.1\|437220_438183_-	cell wall hydrolase	A0A218MLD1	uncultured_virus	6.8e-20	42.0
WP_013418067.1\|438467_439430_-	AAA family ATPase	NA	NA	NA	NA
WP_041788012.1\|439550_442253_-	pyruvate, phosphate dikinase	A0A2D2W2B1	Stenotrophomonas_phage	2.3e-94	43.1
WP_013418069.1\|443207_443507_+	hypothetical protein	NA	NA	NA	NA
WP_013418070.1\|443531_443942_+	hypothetical protein	NA	NA	NA	NA
WP_013418071.1\|444020_444569_+	hypothetical protein	NA	NA	NA	NA
WP_013418072.1\|444642_446775_+	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.0e-48	28.3
WP_013418073.1\|446918_447875_-	aliphatic sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_041788018.1\|447879_448623_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	9.8e-27	36.1
WP_013418075.1\|448670_449465_-	aliphatic sulfonate ABC transporter permease SsuC	NA	NA	NA	NA
WP_155942321.1\|449697_450471_-	hypothetical protein	NA	NA	NA	NA
WP_041787194.1\|450549_451569_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013418080.1\|453317_454754_-	hypothetical protein	NA	NA	NA	NA
WP_013418082.1\|455343_457635_-	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA
WP_041788024.1\|457651_458362_-	polysaccharide biosynthesis/export family protein	NA	NA	NA	NA
WP_013418084.1\|458681_460265_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.9e-105	45.1
WP_041787200.1\|460704_461112_-\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.1e-06	53.3
WP_169309499.1\|461964_463431_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_013418088.1\|463631_464597_+\|transposase	IS481 family transposase	Q8UM96	Porcine_endogenous_retrovirus	7.3e-06	31.0
WP_013418089.1\|464593_465679_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_155942322.1\|466193_466520_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_013418091.1\|466790_468293_+	sugar transferase	NA	NA	NA	NA
WP_013418092.1\|468575_469853_+	nucleotide sugar dehydrogenase	M1HKZ1	Paramecium_bursaria_Chlorella_virus	7.3e-22	29.6
WP_013418093.1\|470169_471105_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_013418094.1\|471101_472127_+	NAD-dependent epimerase	NA	NA	NA	NA
WP_013418095.1\|472304_473231_+	FkbM family methyltransferase	NA	NA	NA	NA
WP_013418096.1\|473385_475395_+	asparagine synthase (glutamine-hydrolyzing)	A0A1B1ISV2	uncultured_Mediterranean_phage	7.0e-27	30.7
WP_013418097.1\|475399_476446_+	EpsG family protein	NA	NA	NA	NA
WP_013418098.1\|476545_477556_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_013418099.1\|477581_478526_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_013418100.1\|478614_479739_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_169309500.1\|479805_480918_+	hypothetical protein	NA	NA	NA	NA
WP_041787200.1\|481466_481874_+\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.1e-06	53.3

DBSCAN-SWA_2

1371620 : 1433055

Porcine_endogenous_retrovirus(22.22%)

transposase,integrase

attL 1392377:1392394|attR 1406266:1406283

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013418485.1\|1371620_1372586_+\|transposase	IS481 family transposase	E2FK51	Porcine_endogenous_retrovirus	1.6e-05	30.5
WP_013418906.1\|1373784_1374765_-	FecR family protein	NA	NA	NA	NA
WP_013418907.1\|1374809_1375316_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_013418909.1\|1377386_1378871_+	caspase family protein	NA	NA	NA	NA
WP_013418910.1\|1378888_1379656_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_155942360.1\|1379834_1380595_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.4e-12	34.5
WP_013418913.1\|1380665_1381631_-\|transposase	IS481 family transposase	E2FK51	Porcine_endogenous_retrovirus	1.6e-05	30.5
WP_013418914.1\|1381739_1382831_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_013418915.1\|1382830_1383175_+	hypothetical protein	NA	NA	NA	NA
WP_013418916.1\|1383249_1384464_+	DUF4384 domain-containing protein	NA	NA	NA	NA
WP_013418917.1\|1384660_1385878_+	hypothetical protein	NA	NA	NA	NA
WP_013418918.1\|1385903_1386365_+	hypothetical protein	NA	NA	NA	NA
WP_013418919.1\|1386368_1387688_+	hypothetical protein	NA	NA	NA	NA
WP_013418920.1\|1387678_1388665_+	hypothetical protein	NA	NA	NA	NA
WP_013418921.1\|1388734_1389205_+	hypothetical protein	NA	NA	NA	NA
WP_155942362.1\|1389305_1389809_-	caspase family protein	NA	NA	NA	NA
WP_013418922.1\|1389805_1390603_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	6.1e-59	47.9
WP_049779242.1\|1391890_1393222_-	tetratricopeptide repeat protein	NA	NA	NA	NA
1392377:1392394	attL	NA	NA	NA	NA
WP_013418923.1\|1393457_1394366_+	OmpA family protein	NA	NA	NA	NA
WP_013418924.1\|1394376_1396023_+	caspase family protein	NA	NA	NA	NA
WP_013418925.1\|1396019_1397504_+	DUF1986 domain-containing protein	Q6JPG5	Neodiprion_lecontei_nucleopolyhedrovirus	6.7e-27	34.3
WP_013418926.1\|1397514_1398702_+	proteinase inhibitor I4 serpin	NA	NA	NA	NA
WP_013418927.1\|1398909_1400457_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_013418928.1\|1400827_1402006_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.4e-66	35.1
WP_013418929.1\|1402276_1403563_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_013418930.1\|1403895_1404876_+	hypothetical protein	NA	NA	NA	NA
WP_155942364.1\|1405233_1405479_+	hypothetical protein	NA	NA	NA	NA
WP_013418932.1\|1405712_1406090_-	hypothetical protein	NA	NA	NA	NA
WP_049779243.1\|1406786_1407962_-	patatin-like phospholipase family protein	NA	NA	NA	NA
1406266:1406283	attR	NA	NA	NA	NA
WP_013418934.1\|1408224_1408845_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_013418935.1\|1408841_1410074_-	hypothetical protein	NA	NA	NA	NA
WP_013418936.1\|1410314_1410881_+	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_013418937.1\|1410877_1411753_+	hypothetical protein	NA	NA	NA	NA
WP_013418938.1\|1411899_1412760_+	formyltetrahydrofolate deformylase	M4QRX9	Synechococcus_phage	9.7e-10	40.2
WP_013418939.1\|1412956_1413124_+	hypothetical protein	NA	NA	NA	NA
WP_013418940.1\|1413348_1414248_+	cation transporter	NA	NA	NA	NA
WP_013418941.1\|1414281_1415202_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_013418942.1\|1415256_1416165_-	TIM barrel protein	NA	NA	NA	NA
WP_013418943.1\|1416336_1417539_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_013418944.1\|1417979_1418639_-	methionine biosynthesis protein MetW	NA	NA	NA	NA
WP_013418945.1\|1418635_1419814_-	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_013418946.1\|1420017_1420239_-	hypothetical protein	NA	NA	NA	NA
WP_013418947.1\|1420710_1422504_+	acyl-CoA dehydrogenase C-terminal domain-containing protein	NA	NA	NA	NA
WP_155942548.1\|1422558_1423239_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_081449408.1\|1423533_1424778_-	N-acetyltransferase	NA	NA	NA	NA
WP_155942366.1\|1424909_1426430_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_013418951.1\|1426548_1427388_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.8e-22	30.2
WP_013418952.1\|1427426_1428179_-	OstA family protein	NA	NA	NA	NA
WP_013418953.1\|1428175_1428991_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_013418954.1\|1429055_1429670_-	ribonuclease D	K7XYU9	uncultured_Mediterranean_phage	1.0e-13	36.4
WP_013418955.1\|1429857_1431414_+	c-type cytochrome	NA	NA	NA	NA
WP_155942367.1\|1431423_1431660_-	hypothetical protein	NA	NA	NA	NA
WP_013417725.1\|1431969_1433055_-\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1559408 : 1642295

Stx2-converting_phage(23.08%)

transposase,protease,integrase

attL 1555637:1555651|attR 1609390:1609405

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1555637:1555651	attL	NA	NA	NA	NA
WP_013419072.1\|1559408_1560833_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
1555637:1555651	attL	NA	NA	NA	NA
WP_013419073.1\|1560925_1561507_+	carbonic anhydrase	NA	NA	NA	NA
WP_013419074.1\|1561871_1562216_+	hypothetical protein	NA	NA	NA	NA
WP_013419075.1\|1562216_1562786_+	hypothetical protein	NA	NA	NA	NA
WP_155942375.1\|1562800_1563328_+	hypothetical protein	NA	NA	NA	NA
WP_155942377.1\|1563648_1567158_+	hypothetical protein	NA	NA	NA	NA
WP_013419078.1\|1567230_1567992_-	N-6 DNA methylase	NA	NA	NA	NA
WP_013419079.1\|1568505_1569408_+	hypothetical protein	NA	NA	NA	NA
WP_041787329.1\|1569518_1569917_+	hypothetical protein	NA	NA	NA	NA
WP_013419080.1\|1569913_1570396_+	ImmA/IrrE family metallo-endopeptidase	Q854W5	Mycobacterium_virus	9.5e-15	35.3
WP_013419081.1\|1570392_1571304_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_013419082.1\|1571296_1572325_-	P63C domain-containing protein	A0A0M4S6X1	Salmonella_phage	1.7e-53	36.0
WP_013419083.1\|1572411_1572654_-	hypothetical protein	NA	NA	NA	NA
WP_013419084.1\|1572663_1572957_-	hypothetical protein	NA	NA	NA	NA
WP_013419086.1\|1573636_1573849_-	hypothetical protein	NA	NA	NA	NA
WP_081449409.1\|1573955_1574366_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013419089.1\|1575682_1579648_+	hypothetical protein	NA	NA	NA	NA
WP_081449410.1\|1579678_1580077_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_013419090.1\|1580034_1581642_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.1e-102	40.0
WP_169309586.1\|1581701_1582052_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_013419092.1\|1582051_1582495_-	IS66 family insertion sequence hypothetical protein	Q76S41	Shigella_phage	1.7e-05	53.1
WP_081449411.1\|1582506_1583190_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_013419093.1\|1583186_1583633_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_013419094.1\|1583629_1583911_-	hypothetical protein	NA	NA	NA	NA
1583763:1583777	attR	NA	NA	NA	NA
WP_041787332.1\|1584395_1585442_+	hypothetical protein	NA	NA	NA	NA
1583763:1583777	attR	NA	NA	NA	NA
WP_013419096.1\|1585667_1587452_+	SIR2 family protein	NA	NA	NA	NA
WP_041787200.1\|1587933_1588341_+\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.1e-06	53.3
WP_013419097.1\|1588337_1588685_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.9e-34	56.1
WP_013419098.1\|1588781_1590365_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.9e-104	44.8
WP_013419099.1\|1590677_1591562_+	DUF1738 domain-containing protein	D6PF71	uncultured_phage	1.6e-36	32.6
WP_013419100.1\|1591687_1592653_+	HNH endonuclease	NA	NA	NA	NA
WP_013419101.1\|1592684_1593596_+	S1/P1 nuclease	NA	NA	NA	NA
WP_081449413.1\|1593660_1593990_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_041788568.1\|1594032_1594293_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_041788570.1\|1594864_1595089_+	hypothetical protein	NA	NA	NA	NA
WP_013419105.1\|1595085_1595253_+	hypothetical protein	NA	NA	NA	NA
WP_013419106.1\|1595249_1595447_+	hypothetical protein	NA	NA	NA	NA
WP_013419107.1\|1595443_1595653_+	hypothetical protein	NA	NA	NA	NA
WP_013419108.1\|1595649_1596303_+	hypothetical protein	A0A1W6DX30	Sphingobium_phage	2.9e-22	38.0
WP_013419110.1\|1596663_1597116_-	hypothetical protein	NA	NA	NA	NA
WP_013419111.1\|1597099_1597807_-	ParA family protein	NA	NA	NA	NA
WP_013419112.1\|1598150_1599206_+	plasmid encoded RepA protein	NA	NA	NA	NA
WP_155942378.1\|1599636_1600782_-	hypothetical protein	NA	NA	NA	NA
WP_013419114.1\|1600762_1601173_-	hypothetical protein	NA	NA	NA	NA
WP_155942379.1\|1601461_1601623_+	hypothetical protein	NA	NA	NA	NA
WP_013419116.1\|1601632_1602286_-	RloB domain-containing protein	NA	NA	NA	NA
WP_013419117.1\|1602272_1603544_-	ATP-binding protein	V9QJ85	Oenococcus_phage	2.4e-09	32.4
WP_013419118.1\|1603895_1605017_+	Fic family protein	NA	NA	NA	NA
WP_013419120.1\|1605388_1606570_-\|integrase	tyrosine-type recombinase/integrase	A0A221SAN4	Ralstonia_phage	5.3e-43	33.2
WP_013419121.1\|1606962_1607367_-	hypothetical protein	NA	NA	NA	NA
WP_013419122.1\|1607350_1607635_-	hypothetical protein	NA	NA	NA	NA
WP_013419123.1\|1607631_1608102_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013419124.1\|1608098_1608608_-	HNH endonuclease	NA	NA	NA	NA
WP_013419125.1\|1608611_1608815_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013419126.1\|1608827_1609751_-	hypothetical protein	J7HXB6	Pseudomonas_phage	8.1e-47	44.7
WP_013419127.1\|1609747_1610743_-	YqaJ viral recombinase family protein	I6NV42	Burkholderia_virus	9.1e-44	36.8
WP_013419128.1\|1610920_1611550_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013419130.1\|1612451_1613873_+	DEAD/DEAH box helicase	A0A193GYQ8	Enterobacter_phage	5.5e-95	42.6
WP_041787342.1\|1613921_1614152_+	hypothetical protein	NA	NA	NA	NA
WP_013419132.1\|1614151_1614571_+	VRR-NUC domain-containing protein	A0A193GYR3	Enterobacter_phage	8.8e-17	43.4
WP_013419133.1\|1614567_1617117_+	toprim domain-containing protein	H9C0J7	Bdellovibrio_phage	1.8e-72	30.1
WP_013418084.1\|1617134_1618718_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.9e-105	45.1
WP_013419097.1\|1618814_1619162_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.9e-34	56.1
WP_041787200.1\|1619158_1619566_-\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.1e-06	53.3
WP_013419134.1\|1620237_1620954_+	HNH endonuclease	NA	NA	NA	NA
WP_155942382.1\|1620899_1621328_-	DNA mismatch endonuclease Vsr	I6NSG0	Burkholderia_phage	9.3e-30	48.7
WP_013419136.1\|1621362_1623357_-	ATP-binding protein	NA	NA	NA	NA
WP_155942383.1\|1623353_1624481_-	DNA (cytosine-5-)-methyltransferase	A0A0R6PG08	Moraxella_phage	5.2e-88	50.6
WP_013419138.1\|1624928_1625129_+	hypothetical protein	NA	NA	NA	NA
WP_081449564.1\|1625140_1625947_-	site-specific DNA-methyltransferase	A0A2P1CGF5	Mycobacterium_phage	4.9e-56	50.0
WP_013419140.1\|1626294_1626489_+	hypothetical protein	NA	NA	NA	NA
WP_041787348.1\|1626571_1626952_-	transcriptional regulator	A0A222YXG1	Escherichia_phage	1.6e-20	43.6
WP_013419142.1\|1627040_1627613_-	hypothetical protein	NA	NA	NA	NA
WP_041787350.1\|1628166_1628358_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_013419143.1\|1628438_1630460_+	hypothetical protein	NA	NA	NA	NA
WP_013419144.1\|1630969_1632601_+	AAA family ATPase	NA	NA	NA	NA
WP_013419145.1\|1632597_1633737_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_013419146.1\|1634302_1635073_-	helix-turn-helix domain-containing protein	K4I1D2	Acidithiobacillus_phage	5.6e-25	55.9
WP_013419147.1\|1635069_1635288_-	hypothetical protein	NA	NA	NA	NA
WP_081449415.1\|1635631_1635988_-	hypothetical protein	NA	NA	NA	NA
WP_041787352.1\|1637311_1638277_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_049779262.1\|1638405_1638993_+	OmpA family protein	NA	NA	NA	NA
WP_041787200.1\|1639862_1640270_+\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.1e-06	53.3
WP_013418084.1\|1640711_1642295_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.9e-105	45.1

DBSCAN-SWA_4

1917299 : 1959817

Stx2-converting_phage(28.57%)

transposase,protease,integrase,tRNA

attL 1918256:1918274|attR 1967573:1967591

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013419391.1\|1917299_1918331_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
1918256:1918274	attL	NA	NA	NA	NA
WP_013419392.1\|1918447_1919551_+\|integrase	site-specific integrase	I6NSG1	Burkholderia_phage	8.9e-109	55.3
WP_049779298.1\|1919563_1920004_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_155942398.1\|1920154_1920301_-	hypothetical protein	NA	NA	NA	NA
WP_041787390.1\|1920303_1920510_+	hypothetical protein	NA	NA	NA	NA
WP_013419395.1\|1920921_1921479_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_155942399.1\|1921587_1921725_+	hypothetical protein	NA	NA	NA	NA
WP_155942400.1\|1922087_1923002_+	hypothetical protein	NA	NA	NA	NA
WP_013419398.1\|1923848_1924772_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_013419399.1\|1924768_1925722_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_013419400.1\|1925752_1927045_-	conjugal transfer protein TrbI	NA	NA	NA	NA
WP_013419401.1\|1927142_1928063_-	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
WP_013419402.1\|1928079_1928769_-	conjugal transfer protein	NA	NA	NA	NA
WP_013419403.1\|1928832_1930179_-	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
WP_013419404.1\|1930178_1930934_-	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
WP_013419405.1\|1930917_1933422_-	transporter	NA	NA	NA	NA
WP_013419406.1\|1933430_1933718_-	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_013419407.1\|1933717_1934056_-	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_013419408.1\|1934060_1935026_-	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA
WP_041787395.1\|1935024_1935207_+	hypothetical protein	NA	NA	NA	NA
WP_013419409.1\|1935568_1935874_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013419090.1\|1936014_1937622_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.1e-102	40.0
WP_169309586.1\|1937681_1938032_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_013419092.1\|1938031_1938475_-	IS66 family insertion sequence hypothetical protein	Q76S41	Shigella_phage	1.7e-05	53.1
WP_155942401.1\|1939242_1939938_+	hypothetical protein	NA	NA	NA	NA
WP_049779301.1\|1940880_1945617_-	DEAD/DEAH box helicase family protein	I3PUW5	Vibrio_phage	5.9e-258	36.8
WP_049779302.1\|1945602_1946043_+	hypothetical protein	NA	NA	NA	NA
WP_013419412.1\|1946039_1946324_-	TnpV protein	NA	NA	NA	NA
WP_013419413.1\|1946521_1946872_-	hypothetical protein	NA	NA	NA	NA
WP_013419414.1\|1947206_1947566_+	hypothetical protein	NA	NA	NA	NA
WP_013419415.1\|1947579_1948335_+	conjugal transfer protein TraL	NA	NA	NA	NA
WP_013419416.1\|1948303_1948819_+	hypothetical protein	NA	NA	NA	NA
WP_013419417.1\|1948861_1949497_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155942403.1\|1950837_1951182_-	hypothetical protein	NA	NA	NA	NA
WP_041787398.1\|1952025_1952433_-\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.1e-06	53.3
WP_013419421.1\|1952853_1954125_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2I7SAX5	Vibrio_phage	1.6e-24	29.5
WP_013419422.1\|1954239_1954725_-	hypothetical protein	NA	NA	NA	NA
WP_049779305.1\|1955496_1956819_+	S41 family peptidase	NA	NA	NA	NA
WP_013419090.1\|1958209_1959817_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.1e-102	40.0
1967573:1967591	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2185399 : 2230850

Erwinia_phage(20.0%)

protease,integrase

attL 2185746:2185760|attR 2231757:2231771

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013419623.1\|2185399_2186560_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
2185746:2185760	attL	NA	NA	NA	NA
WP_155942416.1\|2186730_2189118_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_013419625.1\|2189218_2190271_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_013419626.1\|2190282_2190795_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_013419627.1\|2190811_2191612_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_013419628.1\|2191608_2192508_+	UDP-2,3-diacylglucosamine diphosphatase LpxI	NA	NA	NA	NA
WP_013419629.1\|2192923_2193310_+	DUF423 domain-containing protein	NA	NA	NA	NA
WP_013419630.1\|2193574_2194087_-	hypothetical protein	NA	NA	NA	NA
WP_013419631.1\|2194480_2195332_-	SHOCT domain-containing protein	NA	NA	NA	NA
WP_013419632.1\|2195421_2196735_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A173GFL6	Erwinia_phage	2.3e-47	31.9
WP_013419633.1\|2196727_2197300_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_013419634.1\|2197392_2197986_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_013419635.1\|2198005_2198485_+	DUF2628 domain-containing protein	NA	NA	NA	NA
WP_013419636.1\|2198486_2199137_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_013419637.1\|2199099_2199471_-	hypothetical protein	NA	NA	NA	NA
WP_013419638.1\|2199608_2200340_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_049779341.1\|2200528_2201842_+	DUF3108 domain-containing protein	NA	NA	NA	NA
WP_013419640.1\|2202005_2205449_+	helicase	A0A248SJQ0	Salicola_phage	2.0e-26	32.7
WP_013419641.1\|2205445_2205763_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_013419643.1\|2206463_2207831_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	8.3e-80	39.0
WP_013419644.1\|2208656_2209061_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_013419645.1\|2209198_2210617_+	sodium:proton antiporter	NA	NA	NA	NA
WP_041788897.1\|2212867_2213518_+	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA
WP_013419648.1\|2213761_2214106_+	hypothetical protein	NA	NA	NA	NA
WP_041788902.1\|2214145_2216428_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.5e-54	29.2
WP_155942417.1\|2216597_2217002_-	hypothetical protein	NA	NA	NA	NA
WP_041787456.1\|2216973_2217174_-	hypothetical protein	NA	NA	NA	NA
WP_049779345.1\|2217254_2217923_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_081449567.1\|2218146_2219295_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_013419651.1\|2219302_2222455_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_013419652.1\|2222457_2223996_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_013419653.1\|2224587_2224791_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_041787457.1\|2224952_2226392_+	hypothetical protein	NA	NA	NA	NA
WP_041787458.1\|2226388_2226670_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_041787459.1\|2226749_2227769_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_041787768.1\|2227772_2228390_+	recombinase family protein	NA	NA	NA	NA
WP_049779347.1\|2228335_2229397_+	recombinase family protein	NA	NA	NA	NA
WP_013419654.1\|2229578_2230850_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1W6JPG6	Morganella_phage	7.8e-32	29.1
2231757:2231771	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2666756 : 2709881

Stx2-converting_phage(21.43%)

transposase,integrase,tRNA

attL 2684209:2684225|attR 2722002:2722018

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013420046.1\|2666756_2667554_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	2.7e-59	48.3
WP_049779399.1\|2667477_2668020_-	hypothetical protein	A0A218MNF2	uncultured_virus	1.1e-40	55.4
WP_155942445.1\|2668021_2668480_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	1.0e-26	51.2
WP_013420048.1\|2668522_2668729_-	hypothetical protein	NA	NA	NA	NA
WP_013418084.1\|2669561_2671145_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.9e-105	45.1
WP_013420049.1\|2671241_2671589_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.5e-33	55.1
WP_041787200.1\|2671585_2671993_-\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.1e-06	53.3
WP_013420050.1\|2672280_2672499_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013420051.1\|2672603_2672789_+	hypothetical protein	NA	NA	NA	NA
WP_169309547.1\|2673142_2673541_+\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	4.9e-09	34.2
WP_169309548.1\|2673506_2673680_+\|transposase	transposase	NA	NA	NA	NA
WP_013420052.1\|2673758_2675891_-	glycosyltransferase	NA	NA	NA	NA
WP_155942447.1\|2677440_2678715_+	hypothetical protein	NA	NA	NA	NA
WP_013420055.1\|2679065_2680631_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_013420056.1\|2680871_2681840_-	GDP-mannose 4,6-dehydratase	NA	NA	NA	NA
WP_013420057.1\|2681856_2682834_-	GDP-mannose 4,6-dehydratase	M4QRT5	Synechococcus_phage	1.1e-97	56.0
WP_013420058.1\|2683168_2684584_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	2.2e-59	30.9
2684209:2684225	attL	NA	NA	NA	NA
WP_013420059.1\|2684586_2685894_-	capsular biosynthesis protein	NA	NA	NA	NA
WP_013420060.1\|2686002_2687157_-	polysaccharide export protein	NA	NA	NA	NA
WP_013420061.1\|2687448_2688825_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_013420062.1\|2688821_2689835_+	hypothetical protein	NA	NA	NA	NA
WP_013420063.1\|2689834_2691139_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_013420064.1\|2691184_2691586_+	hypothetical protein	NA	NA	NA	NA
WP_013420065.1\|2691855_2692980_+	WcbD protein	NA	NA	NA	NA
WP_013420066.1\|2692972_2693770_+	ABC transporter permease	NA	NA	NA	NA
WP_041787573.1\|2694003_2695089_+	hypothetical protein	NA	NA	NA	NA
WP_013420068.1\|2695085_2695769_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.8e-06	28.7
WP_013420069.1\|2695775_2697113_+	glycosyltransferase family 4 protein	K9ME50	Sulfolobus_virus	6.3e-08	29.3
WP_013419092.1\|2697424_2697868_+	IS66 family insertion sequence hypothetical protein	Q76S41	Shigella_phage	1.7e-05	53.1
WP_169309586.1\|2697867_2698218_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_013420070.1\|2698277_2699882_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.8e-102	39.8
WP_155942569.1\|2700728_2702228_-	phosphomannomutase	NA	NA	NA	NA
WP_013420073.1\|2702650_2703049_-\|tRNA	tRNA(fMet)-specific endonuclease VapC	NA	NA	NA	NA
WP_013420074.1\|2703048_2703282_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_013420075.1\|2703359_2705216_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_013420076.1\|2705212_2705491_-	hypothetical protein	NA	NA	NA	NA
WP_013420077.1\|2705745_2707530_-	DUF927 domain-containing protein	NA	NA	NA	NA
WP_013420078.1\|2707585_2707834_-	hypothetical protein	NA	NA	NA	NA
WP_013420079.1\|2707915_2708638_-	hypothetical protein	NA	NA	NA	NA
WP_013420080.1\|2708597_2709881_-\|integrase	site-specific integrase	A0A291AWU1	Escherichia_phage	3.1e-28	29.1
2722002:2722018	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3064774 : 3073126

Porcine_endogenous_retrovirus(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013420400.1\|3064774_3065740_+\|transposase	IS481 family transposase	Q8UM96	Porcine_endogenous_retrovirus	5.6e-06	31.0
WP_013420401.1\|3066331_3067738_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	4.4e-52	46.0
WP_013420402.1\|3067824_3068922_-	RNA-directed DNA polymerase	A0A1I9KFG3	Aeromonas_phage	1.9e-55	38.3
WP_013420403.1\|3068966_3069275_-	HigA family addiction module antidote protein	M9MUN2	Rhodococcus_phage	4.5e-10	43.4
WP_013420404.1\|3069283_3069580_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A222YWE2	Escherichia_phage	1.2e-20	51.0
WP_013420405.1\|3069643_3070009_-	diversity-generating retroelement protein Avd	D4HTV8	Vibrio_phage	1.6e-06	29.8
WP_013420406.1\|3070117_3073126_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	6.8e-34	36.5

DBSCAN-SWA_8

3401356 : 3453967

Pseudomonas_phage(16.67%)

transposase,integrase

attL 3413920:3413979|attR 3453968:3455113

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013420693.1\|3401356_3402625_+\|integrase	tyrosine-type recombinase/integrase	A0A077KET4	Ralstonia_phage	6.7e-76	41.7
WP_013420694.1\|3402762_3403005_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_013420695.1\|3403108_3404533_+	DUF3987 domain-containing protein	A0A2P1CA42	Pseudomonas_phage	4.7e-110	47.3
WP_013420696.1\|3404878_3405574_+	hypothetical protein	NA	NA	NA	NA
WP_013420697.1\|3406167_3406863_+	hypothetical protein	NA	NA	NA	NA
WP_155942483.1\|3406935_3407334_+	hypothetical protein	NA	NA	NA	NA
WP_013420700.1\|3407968_3408535_-	phosphatidylethanolamine N-methyltransferase family protein	NA	NA	NA	NA
WP_013420701.1\|3408655_3409657_-	prolyl aminopeptidase	NA	NA	NA	NA
WP_013420702.1\|3409853_3411716_-	Na+/solute symporter	NA	NA	NA	NA
WP_013420703.1\|3411717_3411978_-	DUF4212 domain-containing protein	NA	NA	NA	NA
WP_013420704.1\|3412136_3412817_+	response regulator transcription factor	NA	NA	NA	NA
WP_013420705.1\|3412968_3413565_-	metallophosphoesterase family protein	A0A292GAJ3	Xanthomonas_phage	2.9e-29	40.8
3413920:3413979	attL	NA	NA	NA	NA
WP_013417725.1\|3413979_3415065_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_155942484.1\|3415030_3415357_-	hypothetical protein	NA	NA	NA	NA
WP_013420707.1\|3415904_3416981_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_013420708.1\|3417153_3417735_-	recombinase family protein	M9Q1K0	Clostridium_phage	1.1e-25	43.3
WP_013420709.1\|3417985_3420313_-	DEAD/DEAH box helicase family protein	Q5YA94	Bacillus_phage	8.4e-24	25.3
WP_013420710.1\|3420327_3421431_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_013420711.1\|3421427_3422876_-	N-6 DNA methylase	A0A1V0SLK8	Klosneuvirus	3.7e-22	29.0
WP_013420712.1\|3423166_3424012_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_049779482.1\|3424916_3425960_+	hypothetical protein	NA	NA	NA	NA
WP_169309568.1\|3426584_3426746_+	hypothetical protein	NA	NA	NA	NA
WP_013420714.1\|3426877_3427369_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_013420715.1\|3427489_3428692_+	methionine gamma-lyase	A0A0B5JD48	Pandoravirus	1.0e-20	33.2
WP_155942583.1\|3429914_3431500_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.0e-105	45.1
WP_013419097.1\|3431596_3431944_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.9e-34	56.1
WP_041787200.1\|3431940_3432348_-\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.1e-06	53.3
WP_013420716.1\|3433295_3433592_-	HigA family addiction module antidote protein	M9MUN2	Rhodococcus_phage	5.8e-15	46.6
WP_013420717.1\|3433602_3433887_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_013420718.1\|3434021_3434627_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_081449501.1\|3434645_3435545_-	HNH endonuclease	NA	NA	NA	NA
WP_013420721.1\|3435776_3436232_+	DNA mismatch endonuclease Vsr	E5E3X5	Burkholderia_phage	8.3e-37	49.0
WP_013420722.1\|3436354_3436861_+	hypothetical protein	NA	NA	NA	NA
WP_081449575.1\|3438181_3438424_-	AAA family ATPase	NA	NA	NA	NA
WP_013420725.1\|3439533_3441999_-	hypothetical protein	NA	NA	NA	NA
WP_013420726.1\|3442009_3445210_-	hypothetical protein	NA	NA	NA	NA
WP_041787757.1\|3445652_3446786_-	glycosyltransferase	NA	NA	NA	NA
WP_013420730.1\|3448483_3449416_-	restriction endonuclease	NA	NA	NA	NA
WP_013417725.1\|3452881_3453967_-\|transposase	IS630 family transposase	NA	NA	NA	NA
3453968:3455113	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3635369 : 3643433

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013420880.1\|3635369_3636407_+	peptidoglycan-binding protein	A0A1Y0T0G4	Sinorhizobium_phage	5.7e-33	48.0
WP_013420881.1\|3636421_3636769_+	hypothetical protein	NA	NA	NA	NA
WP_013420882.1\|3636765_3637053_+	hypothetical protein	NA	NA	NA	NA
WP_013420883.1\|3637135_3637516_-	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	2.5e-10	43.0
WP_013420884.1\|3638030_3638579_+	single-stranded DNA-binding protein	A0A0K1LLZ9	Caulobacter_phage	1.4e-43	69.2
WP_155942588.1\|3638837_3641588_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	2.3e-97	32.3
WP_013420886.1\|3641605_3642130_+	pantetheine-phosphate adenylyltransferase	NA	NA	NA	NA
WP_013420887.1\|3642329_3642881_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.0e-41	54.4
WP_013420888.1\|3642968_3643433_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.9e-36	55.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014664

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection