CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP005388	Campylobacter jejuni subsp. jejuni CG8421 chromosome, complete genome	3 crisprs	DEDDh,WYL,c2c9_V-U4,cas2,cas1,cas9,csa3	0	6	2	0

1. NZ_CP005388

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP005388_1

• CRISPR_ID: NZ_CP005388_1
• CRISPR_location: 763155-763294
• CRISPR_type: TypeV-U4
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: c2c9_V-U4

Consensus repeat of NZ_CP005388_1

Consensus_repeat	Method
ATTGATAAGATTAGCGGTCAAGGCGAGAGGGAGTGAGGTG	CRISPRCasFinder

spacers of NZ_CP005388_1

>1.1|763195|60|NZ_CP005388|CRISPRCasFinder
TAGATATTGACATCAAAAAGGCACTCCCTTATACTTGACGGAAAAAGGTAAAAAAAACTC

CRISPR arrays and Neighbor proteins around NZ_CP005388_1

CRISPR arrays

The CRISPR arrays of NZ_CP005388_1

>merge|NZ_CP005388|1|763155-763294|CRISPRCasFinder
ATTGATAAGATTAGCGGTCAAGGCGAGAGGGAGTGAGGTGTAGATATTGACATCAAAAAGGCACTCCCTTATACTTGACGGAAAAAGGTAAAAAAAACTCATTGATAAGATTAGCGGTCAAGGCGAGAGGGAGTGAGGTG

>NZ_CP005388|1|1|763155-763294|CRISPRCasFinder
ATTGATAAGATTAGCGGTCAAGGCGAGAGGGAGTGAGGTG	TAGATATTGACATCAAAAAGGCACTCCCTTATACTTGACGGAAAAAGGTAAAAAAAACTC
ATTGATAAGATTAGCGGTCAAGGCGAGAGGGAGTGAGGTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP005388.1|WP_001129922.1|758642_759017_+|TnpV-protein	unknown	unknown	gnl|CDD|379499
NZ_CP005388.1|WP_002860493.1|769965_771120_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl|CDD|235513
NZ_CP005388.1|WP_002859508.1|771737_772406_+|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl|CDD|259850
NZ_CP005388.1|WP_002859503.1|767014_767785_+|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|270347
NZ_CP005388.1|WP_002860494.1|771116_771734_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002804229.1|761725_762394_+|hypothetical-protein	unknown	unknown	gnl|CDD|367497
NZ_CP005388.1|WP_002860780.1|757896_758244_+|MobC-family-plasmid-mobilization-relaxosome-protein	unknown	unknown	gnl|CDD|368576
NZ_CP005388.1|WP_002860491.1|766138_766921_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002860775.1|753418_754831_+|threonine-synthase	unknown	unknown	gnl|CDD|107203
NZ_CP005388.1|WP_002860496.1|773178_774204_+|LptF/LptG-family-permease	unknown	unknown	gnl|CDD|223866
NZ_CP005388.1|WP_002779755.1|761354_761528_+|cysteine-rich-KTR-domain-containing-protein	unknown	unknown	gnl|CDD|379503
NZ_CP005388.1|WP_032592297.1|772402_773179_+|prepilin-peptidase	unknown	unknown	gnl|CDD|377700
NZ_CP005388.1|WP_002860776.1|754827_755547_+|3-deoxy-manno-octulosonate-cytidylyltransferase	unknown	unknown	gnl|CDD|224133
NZ_CP005388.1|WP_002801797.1|762688_763111_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002782963.1|764696_765335_-|IS607-like-element-ISChh1-family-transposase	unknown	unknown	gnl|CDD|239738
NZ_CP005388.1|WP_004614779.1|757757_757919_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002860782.1|759383_761303_+|tetracycline-resistance-ribosomal-protection-protein-Tet(O)	unknown	unknown	gnl|CDD|206731
NZ_CP005388.1|WP_002860777.1|755557_756901_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_032587050.1|767800_768535_-|flagellar-type-III-secretion-system-pore-protein-FliP	unknown	unknown	gnl|CDD|235566
NZ_CP005388.1|WP_002807694.1|763417_764710_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	gnl|CDD|223747

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP005388.1|WP_002807694.1|763417_764710_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	1.4e-84	279.3	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP005388.1|WP_001129922.1|758642_759017_+|TnpV-protein	gnl|CDD|379499	pfam14198, TnpV, Transposon-encoded protein TnpV. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 114 and 125 amino acids in length.	6.26528e-55
NZ_CP005388.1|WP_002859508.1|771737_772406_+|di-trans,poly-cis-decaprenylcistransferase	gnl|CDD|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	1.98774e-98
NZ_CP005388.1|WP_002859503.1|767014_767785_+|transporter-substrate-binding-domain-containing-protein	gnl|CDD|270347	cd13629, PBP2_Dsm1740, Amino acid-binding domain of the type 2 periplasmic binding fold superfamily. This subfamily includes the periplasmic binding protein type II (BPBII). This domain is found in solute binding proteins that serve as initial receptors in the ABC transport, signal transduction and channel gating. The PBPII proteins share the same architecture as periplasmic binding proteins type I (PBPI), but have a different topology. They are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBPII proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the family includes ionotropic glutamate receptors and unorthodox sensor proteins involved in signal transduction.	5.51441e-101
NZ_CP005388.1|WP_002804229.1|761725_762394_+|hypothetical-protein	gnl|CDD|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	0.00603782
NZ_CP005388.1|WP_002860780.1|757896_758244_+|MobC-family-plasmid-mobilization-relaxosome-protein	gnl|CDD|368576	pfam05713, MobC, Bacterial mobilisation protein (MobC). This family consists of several bacterial MobC-like, mobilisation proteins. MobC proteins belong to the group of relaxases. Together with MobA and MobB they bind to a single cis-active site of a mobilising plasmid, the origin of transfer (oriT) region. The absence of MobC has several different effects on oriT DNA. Site- and strand-specific nicking by MobA protein is severely reduced, accounting for the lower frequency of mobilisation. The localized DNA strand separation required for this nicking is less affected, but becomes more sensitive to the level of active DNA gyrase in the cell. In addition, strand separation is not efficiently extended through the region containing the nick site. These effects suggest a model in which MobC acts as a molecular wedge for the relaxosome-induced melting of oriT DNA. The effect of MobC on strand separation may be partially complemented by the helical distortion induced by supercoiling. However, MobC extends the melted region through the nick site, thus providing the single-stranded substrate required for cleavage by MobA.	2.83917e-08
NZ_CP005388.1|WP_002860775.1|753418_754831_+|threonine-synthase	gnl|CDD|107203	cd01560, Thr-synth_2, Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.	0
NZ_CP005388.1|WP_002860496.1|773178_774204_+|LptF/LptG-family-permease	gnl|CDD|223866	COG0795, COG0795, Predicted permeases [General function prediction only].	8.79821e-45
NZ_CP005388.1|WP_002779755.1|761354_761528_+|cysteine-rich-KTR-domain-containing-protein	gnl|CDD|379503	pfam14205, Cys_rich_KTR, Cysteine-rich KTR. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are approximately 60 amino acids in length. There are 4 conserved cysteines and a conserved KTR sequence motif.	5.76382e-28
NZ_CP005388.1|WP_032592297.1|772402_773179_+|prepilin-peptidase	gnl|CDD|377700	pfam06750, DiS_P_DiS, Bacterial Peptidase A24 N-terminal domain. This family is found at the N-terminus of the pre-pilin peptidases (pfam01478). It's function has not been specifically determined; however some of the family have been characterized as bifunctional, and this domain may contain the N-methylation activity (EC:2.1.1.-). It consists of an intracellular region between a pair of transmembrane. This region contains an invariant proline and two almost fully conserved disulphide bridges - hence the name DiS-P-DiS. The cysteines have been shown to be essential to the overall function of the enzyme in, but their role was incorrectly ascribed.	2.48844e-18
NZ_CP005388.1|WP_002860776.1|754827_755547_+|3-deoxy-manno-octulosonate-cytidylyltransferase	gnl|CDD|224133	COG1212, KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane].	9.47749e-117
NZ_CP005388.1|WP_002860493.1|769965_771120_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl|CDD|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	1.57694e-173
NZ_CP005388.1|WP_002782963.1|764696_765335_-|IS607-like-element-ISChh1-family-transposase	gnl|CDD|239738	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subfamily is composed of proteins that catalyze the transposition of insertion sequence (IS) elements such as IS607 from Helicobacter and IS1535 from Mycobacterium, and similar proteins from other bacteria and several archaeal species. IS elements are DNA segments that move to new sites in prokaryotic and eukaryotic genomes causing insertion mutations and gene rearrangements.	1.27447e-63
NZ_CP005388.1|WP_002860782.1|759383_761303_+|tetracycline-resistance-ribosomal-protection-protein-Tet(O)	gnl|CDD|206731	cd04168, TetM_like, Tet(M)-like family includes Tet(M), Tet(O), Tet(W), and OtrA, containing tetracycline resistant proteins. Tet(M), Tet(O), Tet(W), and OtrA are tetracycline resistance genes found in Gram-positive and Gram-negative bacteria. Tetracyclines inhibit protein synthesis by preventing aminoacyl-tRNA from binding to the ribosomal acceptor site. This subfamily contains tetracycline resistance proteins that function through ribosomal protection and are typically found on mobile genetic elements, such as transposons or plasmids, and are often conjugative. Ribosomal protection proteins are homologous to the elongation factors EF-Tu and EF-G. EF-G and Tet(M) compete for binding on the ribosomes. Tet(M) has a higher affinity than EF-G, suggesting these two proteins may have overlapping binding sites and that Tet(M) must be released before EF-G can bind. Tet(M) and Tet(O) have been shown to have ribosome-dependent GTPase activity. These proteins are part of the GTP translation factor family, which includes EF-G, EF-Tu, EF2, LepA, and SelB.	9.52429e-145
NZ_CP005388.1|WP_032587050.1|767800_768535_-|flagellar-type-III-secretion-system-pore-protein-FliP	gnl|CDD|235566	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed.	8.73751e-122
NZ_CP005388.1|WP_002807694.1|763417_764710_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.88643e-44

Protein sequences

>NZ_CP005388.1|WP_002801797.1|762688_763111_+|hypothetical-protein
MRTEYKHNPPIPYSLHDMRVKKIIIQDKTIVLEFEDGYEKLTEPFEQVEGNITIEGVDFDCTCVMLQSKWGNYGKFNGEKLELERFIKRYKNYSFEIVDELYGYNQVLYSGYLSILETEDLVQMDISIYFTGKIIYDTKE
>NZ_CP005388.1|WP_002804229.1|761725_762394_+|hypothetical-protein
MHVPEKGKTFAGEVREETVAWSKDTYQLLKQAEQGKVKSYVQDIALAVLDCKETATSRETFIRLMNERGYGVDWQDSHKYITYTDLAREQAGEKACKIRDNKLEKYYNMDFGKESMEHEFERNARTAEAEQSKRAASRVKPTEPDRAGKQSAQRSVGDVERELRGIDEAVKSRTSEGRAEQAERRRAEQEAHQRAEAERRAAEEQQRIASRRYIGRDWEPER
>NZ_CP005388.1|WP_002779755.1|761354_761528_+|cysteine-rich-KTR-domain-containing-protein
MMKCEWILCPVCGSKTRNKIRKDTVLENYPLYCPKCRQERLIKVDNLKITVIKEPDA
>NZ_CP005388.1|WP_002860782.1|759383_761303_+|tetracycline-resistance-ribosomal-protection-protein-Tet(O)
MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTDTMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAVLLVSAKDGIQAQTRILFHALQIMKIPTIFFINKIDQEGIDLPMVYREMKAKLSSEIIVKQKVGQHPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYHGSAKNNLGIRQLIEVIASKFYSSTPEGQSELCGQVFKIEYSEKRRRFVYVRIYSGTLHLRDVIRISEKEKIKITEMYVPTNGELYSSDTACSGDIVILPNDVLQLNSILGNEILLPQRKFIENPLPMLQTTIAVKKSEQREILLGALTEISDCDPLLKYYVDTTTHEIILSFLGNVQMEVICAILEEKYHVEAEIKEPTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIEPLPIGSGVQYESRVSLGYLNQSFQNAVMEGVLYGCEQGLYGWKVTDCKICFEYGLYYSPVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPRYCADIVSTQIKNDEVILKGEIPARCIQEYRNDLTCFTNGQGVCLTELKGYQPAIGKFICQPRRPNSRIDKVRHMFHKLA
>NZ_CP005388.1|WP_001129922.1|758642_759017_+|TnpV-protein
MAKSLFEELGGKYERQGDYLIPCLTVPAEEEQAIGIWGQRHLDYLKQYRKVTYTNLLTSGRLNAYLADINRQAQERFERLIEGMKQAQGITEQLKAENALEWTGCLNNIRACAREIVEKEIIFA
>NZ_CP005388.1|WP_002860780.1|757896_758244_+|MobC-family-plasmid-mobilization-relaxosome-protein
MSWIWSGKGMNKTRPKQLSFRVSEEEYQQLQEKISESGKNQQEYILSCVLEKQIVNTDGIKELIPELKRIGNNLNQIAKRCNEGGMLPSEAEVRKHGEELNKVWQSLRRYLQRRA
>NZ_CP005388.1|WP_004614779.1|757757_757919_+|hypothetical-protein
MKKEMDKIQFEYRYEVQELMKVIDKYVKQNPAEKENKTLERFFDLLDVMDMEW
>NZ_CP005388.1|WP_002860777.1|755557_756901_+|hypothetical-protein
MLERGYPEVSPHDFYRELFPAGSLQQEPEDGKGNIIATQIRPSGKGRTRQWVIDDSLKMLDKVIGDRFGLIPPISFYGKSHTKENAHELFAVVVDVDYVGKQQLKNLLKQFGNGVQLRPTYLVSSGKGVHLYYFLQEPVQLYRNREEVLAELKEAFIRRLWNDTSSIRPDSPDITGIYQGFRCVGSQSKLGVDFPVKAYKLSENRYTLEDIKASIPSCKVDLAPLYEKPRRKSTVTLEEAKELYPEWYEKRIVQGEPKQKSKKQGGTWVCNEALYEWWKRKITEEVKAGGRYFSIMALCSYGLKCGISEQKIRRDAYAFLDHLESLTEDEDNHFSRADVKDALRALKGDRKRLSTIASREWIEDNTKVTIPANKRNYRKQKDHVKVMNTMKALKKQLGEEVKEGRPKGSGTAEQTVREWQESHPAGKKADCIRETGLSKPTVYKWWK
>NZ_CP005388.1|WP_002860776.1|754827_755547_+|3-deoxy-manno-octulosonate-cytidylyltransferase
MIIIPARLKSSRFHEKILCDVGGVPMFVATARRVSSVDEVCIALDDEKVLSIAKEYGLNAVLTSKNHESGTDRINEACKKLSLKDDEIIINVQADEPFIECENLLKFKEFASSCLDKKAFMASCYKKITQEEAMDSNLVKVLCDKEGYALYFSRAKIPYERENYEESFKGHLGIYAYSVKALREFCSLLSSALERAEKLEQLRAIENGKKIKMLEISTTSMGIDTKEDYEKALKIYLEK
>NZ_CP005388.1|WP_002860775.1|753418_754831_+|threonine-synthase
MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYANLSYKDFALKLIESFGFGEEELFKKALKSYESFDDKNTPISLQKISEKTYINELWHGPTRAFKDMALQPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKGGTSGVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNKIKALNYELCAANSVNFGRILFQIIYHYYASLKLFNEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIKIASNVNNILSEFFNHGVYDLREKSLKKTISPAMDILISSNIERLLFAKFKDKRTKELMNLLKNERYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPLKPSIITSTAEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILALFDLKNSDEKVFEAKNIKKEILDWMQK
>NZ_CP005388.1|WP_002807694.1|763417_764710_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MSANNNELISISHKIELKPNNKAKTHFKKAFGCARLAYNWGLAKWQEYYKQGIKVTHLDLKKEFNAIKKEQFPFVYEVSKYATQQPFLNLNLAFQKFFRDLKQGKVSYPKFKKKKDNFGSYYIGGDQAIIKDEKYLKVPNLGLVKMKEKLRFNGKINSFTISQSADKFFVSFSMQISKDEYLKTHNKAKNNNLALGIDVGLKSFLSLSNGLEIKAPKPLAKFNRLMIKRARQLSKKQHAKTKQEALQGIKKSSNYLKASIKLNKLHRKIANIRSDFLHKLTSSLVANAKYFCLEDLNVKGMMSNHRLAKSISDVSFYEFKRQLEYKSSYNDKEIYQVDRFYPSSKLCSNCGTIKENLALKDRVYICDECEISIDRDYNASLNLLSQLKQKIGKVLAEFTPADLTALLNDLAINQIATSKVETGIQQKSYL
>NZ_CP005388.1|WP_002782963.1|764696_765335_-|IS607-like-element-ISChh1-family-transposase
MNKLLSIGQASKALGVTIQTLRNWDKKGLLKPDDMTKGGERRYKLETLKAINKNLVFNKDSLKTIAYARVSSHDQKDDLIRQVQVLELYCSKQGFNYEVIQDLGSGMNYYKKGLTKLLNQILDGKVKRLVLTHKDRLLRFGAELVFAICEAKEVEVIIINKGEESVKFEEELAKDVLEIITVFSARLYGSRSKKNKKLLDEMQEVVVENVSK
>NZ_CP005388.1|WP_002860491.1|766138_766921_+|hypothetical-protein
MADETSGNYYNSFDMASIVKSHYNSFNQVIRAFPNDKTSFSKADLEQLPKGLNYINNEDNEKIVKNIFNTEQFHEAQAIKYSTMGLDMNLMKLDFSPQSMEQDPSIEGDFNPDMSVYPQNEDGSYSKEALFMSFLKSYPPFPSSNQVVLSPEAKVLEAQRKQEMKANPSFDISLDDIMTGKVDFASLLKGYAQDGWLDAGIYAMEKGVKWQNVYVGSGISFDREFHQAKANGWKASNESINSFVNNIMDRLNNLIGQTRV
>NZ_CP005388.1|WP_002859503.1|767014_767785_+|transporter-substrate-binding-domain-containing-protein
MKKIILIFISFFALNLSAKDLVVGMELGYPPFEMSDKTGKASGISVDFLEAFAKKNGYKLVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKVVDFSIPYAKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLKNATINLFDKENAAILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVQKGNAELKKELDEFIAESKKDGLFDSLGEKYLKDVKDTFKKNNLEFFF
>NZ_CP005388.1|WP_032587050.1|767800_768535_-|flagellar-type-III-secretion-system-pore-protein-FliP
MKKILLFLLLSMSLFAAEATIPTVNLNLSAPNTPNQLVTTLNIVIVLTILVLAPSIVFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEPVATKSYNEGIKPYLAEKIGYEEAFIKGAKPFKDFMLKNTREKDLALFYRIRNLPNPKTIDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISLPFKLLIFVLVDGWNLLVQRLVESFVT
>NZ_CP005388.1|WP_002860493.1|769965_771120_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MKTILLAISGSIAFYKSYELISLFKKEGFRVKVLLSNGLLKFASKMSFEALVDEVLCEENESWQNSNNHIAFSKDVDLVLFAPASVNSINKLAFGIADNLFIQTLIAANKPLIIAPAANTNMFHHFSTRNSLKILKENKALIIEPICKVLACKDEGVGALAEVKDIFNITKRELLKEKFWCDKSVVVTGGGTKEKIDDVRCVSNFSSGKMAKAIADAFYFLGARVKLLSSVEFDAPYELCKFESSKDLKELLDKNLNHDFLIMTAAVSDFIPQSVKGKIKKNEHLQGLNLHLSLNEDLLKTCKFQGKKIGFKMEFDSQNALENAKKSLKDKQLDMVCLNIIDQKNYFGSDQNELYFITLNNENKSTLQSKEKLAFELVKWCEKL
>NZ_CP005388.1|WP_002860494.1|771116_771734_+|hypothetical-protein
MSMINSTLPIQMKVLAKSGYGHYTLLLNHKKIQTKSMIELEIGAEYLAELYMQNGGVIQFKHLSKRPNFKPFEEGLALIIAILEDKISYKKFIIQNLLDCKDIERYQILKEMLFASFENIYHIPFIFENKSCLFQMRKRAKYLEIYLYFSVFGALKILIDSQGVSIFTPFAKVRKFLNEHLDFNVSQENKIEPLFVFKRLFDFKG
>NZ_CP005388.1|WP_002859508.1|771737_772406_+|di-trans,poly-cis-decaprenylcistransferase
MNELKHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRAIEKKLELNEENLTQNLDLPLDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFGK
>NZ_CP005388.1|WP_032592297.1|772402_773179_+|prepilin-peptidase
MIFFIIILGACLGSFCTSLASRIIEKKPFFISRSFCFSCDTKLKYYEIIPIFSYIFLKAKCQTCKCHLPISLLINEILGAILLILVYSLSQNFYDFLFLSLFLFNLFLLSLIDIKLKAVPQILLWSAFLFAFFYAFRESEILHFLIFKEFSGGFLLNAFSFGGFVFLLKSLVFFLMNFRKKDEILENLGDADIIIMSCIGGILGFEYGFLVLLIASILTLPFFIFFKIKAIKEQELAMIPFLNIAFVAVLFYKNLGLF
>NZ_CP005388.1|WP_002860496.1|773178_774204_+|LptF/LptG-family-permease
MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRILIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKYENIIMYRPKHKADDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGEFDTLVVNTQFNTDNLQTKKFYEYWNDLNENPQRAREFVIYITIALFPLASTLFALCFGLVTYRYEKGYVYLGMFGVIAIYFGLLSSFSQPPILACLGIFSLSLFVSAYCFKKMILSRY

Crispr_ID: NZ_CP005388_2

• CRISPR_ID: NZ_CP005388_2
• CRISPR_location: 1444761-1444929
• CRISPR_type: TypeII
• Repeat_type: NA
• Spacer_info: 2 spacers
• Cas_protein_info: cas2,cas1,cas9

Consensus repeat of NZ_CP005388_2

Consensus_repeat	Method
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA	CRISPRCasFinder
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATACTT	PILER-CR

spacers of NZ_CP005388_2

>2.1|1444798|29|NZ_CP005388|CRISPRCasFinder
CTTCCCCTGTTGATGATGGCAGTTATAGA
>2.2|1444864|29|NZ_CP005388|CRISPRCasFinder
TTTTGTTTAAGTGATGTTTGTAAGATTTT
>2.3|1444802|26|NZ_CP005388|PILER-CR
CCCCTGTTGATGATGGCAGTTATAGA
>2.4|1444868|26|NZ_CP005388|PILER-CR
TGTTTAAGTGATGTTTGTAAGATTTT

CRISPR arrays and Neighbor proteins around NZ_CP005388_2

CRISPR arrays

The CRISPR arrays of NZ_CP005388_2

>merge|NZ_CP005388|2|1444761-1444929|CRISPRCasFinder,PILER-CR
ATTTTAGCCCCTTTTTAAATTTCTTTATGGTAAAATACTTCCCCTGTTGATGATGGCAGTTATAGAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATATTTTGTTTAAGTGATGTTTGTAAGATTTTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA

>NZ_CP005388|2|2|1444761-1444929|CRISPRCasFinder
ATTTTAGCCCCTTTTTAAATTTCTTTATGGTAAAATA	CTTCCCCTGTTGATGATGGCAGTTATAGA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA	TTTTGTTTAAGTGATGTTTGTAAGATTTT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA

>NZ_CP005388|2|1|1444762-1444929|PILER-CR
TTTTAGCCCCTTTTTAAATTTCTTTATGGTAAAATACTTC	CCCTGTTGATGATGGCAGTTATAGAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATATTTT	GTTTAAGTGATGTTTGTAAGATTTTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP005388.1|WP_002858889.1|1443000_1443447_+|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl|CDD|223391
NZ_CP005388.1|WP_002851546.1|1456750_1457200_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|223854
NZ_CP005388.1|WP_002860689.1|1445496_1446387_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|187851
NZ_CP005388.1|WP_002860691.1|1439963_1441112_-|carboxynorspermidine-decarboxylase	unknown	unknown	gnl|CDD|273414
NZ_CP005388.1|WP_002860687.1|1452544_1453534_-|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439
NZ_CP005388.1|WP_038400688.1|1446383_1449338_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226044
NZ_CP005388.1|WP_172178832.1|1451110_1451974_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_038400693.1|1454196_1454946_+|diaminopimelate-epimerase	unknown	unknown	gnl|CDD|234768
NZ_CP005388.1|WP_002860686.1|1453594_1454200_+|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|234620
NZ_CP005388.1|WP_038400687.1|1434408_1435341_-|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl|CDD|130645
NZ_CP005388.1|WP_002803269.1|1438779_1438971_-|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl|CDD|236534
NZ_CP005388.1|WP_002855377.1|1454920_1455652_+|glucosaminidase-domain-containing-protein	unknown	unknown	gnl|CDD|225539
NZ_CP005388.1|WP_002858890.1|1443450_1444641_+|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl|CDD|223380
NZ_CP005388.1|WP_002860692.1|1438945_1439659_-|molecular-chaperone-TorD-family-protein	unknown	unknown	gnl|CDD|225916
NZ_CP005388.1|WP_170876396.1|1445072_1445486_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NZ_CP005388.1|WP_002779488.1|1442778_1443000_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|224888
NZ_CP005388.1|WP_032592329.1|1441235_1442777_+|multicopper-oxidase-CueO	unknown	unknown	gnl|CDD|225043
NZ_CP005388.1|WP_079263690.1|1435975_1438780_-|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl|CDD|239153
NZ_CP005388.1|WP_002860683.1|1455648_1456686_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NZ_CP005388.1|WP_002851264.1|1435337_1435979_-|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|319893

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP005388.1|WP_002860689.1|1445496_1446387_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	1.9e-99	327.0	10.1
NZ_CP005388.1|WP_170876396.1|1445072_1445486_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	3.5e-55	179.9	0.7
NZ_CP005388.1|WP_038400688.1|1446383_1449338_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	0	1178.2	70.8

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP005388.1|WP_002858889.1|1443000_1443447_+|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl|CDD|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	5.09823e-44
NZ_CP005388.1|WP_002851546.1|1456750_1457200_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.92874e-51
NZ_CP005388.1|WP_002860689.1|1445496_1446387_-|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.13691e-122
NZ_CP005388.1|WP_002860691.1|1439963_1441112_-|carboxynorspermidine-decarboxylase	gnl|CDD|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP005388.1|WP_002860687.1|1452544_1453534_-|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP005388.1|WP_038400688.1|1446383_1449338_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP005388.1|WP_038400693.1|1454196_1454946_+|diaminopimelate-epimerase	gnl|CDD|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	1.69362e-92
NZ_CP005388.1|WP_002860686.1|1453594_1454200_+|dephospho-CoA-kinase	gnl|CDD|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.32317e-69
NZ_CP005388.1|WP_038400687.1|1434408_1435341_-|formate-dehydrogenase-subunit-gamma	gnl|CDD|130645	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit. This model represents the gamma chain of the gamma proteobacteria (and Aquifex aolicus) formate dehydrogenase. This subunit is integral to the cytoplasmic membrane, consisting of 4 transmembrane helices, and receives electrons from the beta subunit. The entire E. coli formate dehydrogenase N (nitrate-inducible form) has been crystallized. The gamma subunit contains two cytochromes, heme b(P) and heme b(C) near the periplasmic and cytoplasmic sides of the membrane respectively. The electron acceptor quinone binds at the cytoplasmic heme histidine ligand. NiFe-hydrogenase and thiosulfate reductase contain homologous gamma subunits, and these can be found scoring in the noise of this model. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	5.52511e-90
NZ_CP005388.1|WP_002803269.1|1438779_1438971_-|twin-arginine-translocation-signal-domain-containing-protein	gnl|CDD|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00537271
NZ_CP005388.1|WP_002855377.1|1454920_1455652_+|glucosaminidase-domain-containing-protein	gnl|CDD|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	1.57422e-98
NZ_CP005388.1|WP_002858890.1|1443450_1444641_+|molybdopterin-molybdotransferase-MoeA	gnl|CDD|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	6.1742e-140
NZ_CP005388.1|WP_002860692.1|1438945_1439659_-|molecular-chaperone-TorD-family-protein	gnl|CDD|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.000703785
NZ_CP005388.1|WP_170876396.1|1445072_1445486_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.67561e-55
NZ_CP005388.1|WP_002779488.1|1442778_1443000_+|MoaD/ThiS-family-protein	gnl|CDD|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	1.67964e-11
NZ_CP005388.1|WP_032592329.1|1441235_1442777_+|multicopper-oxidase-CueO	gnl|CDD|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	1.446e-119
NZ_CP005388.1|WP_079263690.1|1435975_1438780_-|formate-dehydrogenase-subunit-alpha	gnl|CDD|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP005388.1|WP_002860683.1|1455648_1456686_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	4.14058e-33
NZ_CP005388.1|WP_002851264.1|1435337_1435979_-|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.18245e-57

Protein sequences

>NZ_CP005388.1|WP_002858890.1|1443450_1444641_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGITPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLAPVENVRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTKLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNIKFENGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEILENESLVDIIFMP
>NZ_CP005388.1|WP_002858889.1|1443000_1443447_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKHFTLYQGSLDIPKIYSQWYEFSKDKNCGALLTFCGIVREEGGIEALSFDIYEPLLKKWFDEWQKRVDFDGISLLFAHSIGDVAIHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG
>NZ_CP005388.1|WP_002779488.1|1442778_1443000_+|MoaD/ThiS-family-protein
MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFDENTKLKDGDKIALLPPVCGG
>NZ_CP005388.1|WP_032592329.1|1441235_1442777_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNKSKEKNIFRATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGEFRLESAYYDRDKMMVKEESNTLFLASISLKKEKLELPKNLKIFKPLEEPKEFKEIIMSEDHMQMHGMMGKSENELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRAFRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NZ_CP005388.1|WP_002860691.1|1439963_1441112_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCEESADALEAVLKAFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLNAKNELQMIREFSYKDYSLRN
>NZ_CP005388.1|WP_002860692.1|1438945_1439659_-|molecular-chaperone-TorD-family-protein
MGALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFKKVINKSIDEFLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
>NZ_CP005388.1|WP_002803269.1|1438779_1438971_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWEKYYIKAE
>NZ_CP005388.1|WP_079263690.1|1435975_1438780_-|formate-dehydrogenase-subunit-alpha
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAYYIRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPQLAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPEGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NZ_CP005388.1|WP_002851264.1|1435337_1435979_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NZ_CP005388.1|WP_038400687.1|1434408_1435341_-|formate-dehydrogenase-subunit-gamma
MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTFGKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIAAISWVILVPTGFVMMFGEVFGGGVFVRVCKNLHAFATVLFIISIIPMFLCWIKRMLPASYDIRWMMIVGGYLSKIKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI
>NZ_CP005388.1|WP_170876396.1|1445072_1445486_-|CRISPR-associated-endonuclease-Cas2
MRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNLTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF
>NZ_CP005388.1|WP_002860689.1|1445496_1446387_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSISSALFNAFAKYKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFILKKYNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGTSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NZ_CP005388.1|WP_038400688.1|1446383_1449338_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPYELRFRALNELLSKQDFARVILHIAKRRGYDDIKNSDDKEKGAILKAIKQNEEKLANYQSVGEYLYKEYFQKFKENSKEFTNVRNKKESYERCIAQSFLKDELKLIFKKQREFGFSFSKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLNNLKNTEGILYTKDDLNTLLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKKYKEFIKALGDHSLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKDHLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNPVVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNYSQRAKIEKEQNENYKAKKDAELECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKISDLQDEKMLEIDHIYPYSRSFDDSYMNKVLVFTKQNQEKLNQTPFEAFGNDSAKWQKIEVLAKNLPTKKQKRILDKNYKDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNNTQKGSKVYVEAKSGMLTSALRHTWGFSTKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELYAKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPEFVYYNAFTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFRQREDFKK
>NZ_CP005388.1|WP_172178832.1|1451110_1451974_-|hypothetical-protein
MALIFPFLKAFYYEIARTTKQKYFTYAFNTFYLGLLTLIIGIGLVFLLASLVFWILAWVKFKEFDEQELSNLEERLAKAQKKVFDFDLKWIKITMASFIILNLLVLTFSFILEVISFEDFRFYYTKKTLFYTAIILALLSVFLFCKKIKNYKLFIYFFIWQGLSVFGSHLLFIPDFMVDQPPEIIYGSLNIILSLCYIIFAFLFFKILIQITKEKLFYLIFAFYVCIKILIILIFFIFMMVDNYYIFTKSPIKMLIDNYKLLFQVVYFVSFLIVWLMLKGQKNVKIC
>NZ_CP005388.1|WP_002860687.1|1452544_1453534_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIGDKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYTIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE
>NZ_CP005388.1|WP_002860686.1|1453594_1454200_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENALELEKIFSPFNLKNLLTKEKKIDRKILGEIVFNNKEAKKTLENFTHPKIRAKILEQMQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKVRLDSQIDIEEKLKKADFIIKNTNSYVDFRQECVKVIQEISKGKM
>NZ_CP005388.1|WP_038400693.1|1454196_1454946_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGGDGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGIIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCDTGVPHLVHFCQNLDEFDTILCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEKVGFTYKNEELFFEGKVKYCFEANYNFS
>NZ_CP005388.1|WP_002855377.1|1454920_1455652_+|glucosaminidase-domain-containing-protein
MKPIIIFLSLFLIPLFADDLKNGFGEEYYKLDIDQKRQIFFIKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQTNLEKLITIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVYSYVLNLNRHFAYEKFRDARAKFASEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NZ_CP005388.1|WP_002860683.1|1455648_1456686_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKIKIPIILSTNIKDLNINGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEDFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDSFFEQGVKFEVISFDKFSLGF
>NZ_CP005388.1|WP_002851546.1|1456750_1457200_-|DNA-starvation/stationary-phase-protection-protein
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM

Crispr_ID: NZ_CP005388_3

• CRISPR_ID: NZ_CP005388_3
• CRISPR_location: 1581974-1582062
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP005388_3

Consensus_repeat	Method
TTACCGCTTTCATAATCATTTAAAGCCTT	CRISPRCasFinder

spacers of NZ_CP005388_3

>3.1|1582003|31|NZ_CP005388|CRISPRCasFinder
ATGTAGTTCTTGTTTTGTTTCTTGCCAACTT

CRISPR arrays and Neighbor proteins around NZ_CP005388_3

CRISPR arrays

The CRISPR arrays of NZ_CP005388_3

>merge|NZ_CP005388|3|1581974-1582062|CRISPRCasFinder
TTACCGCTTTCATAATCATTTAAAGCCTTATGTAGTTCTTGTTTTGTTTCTTGCCAACTTTTACCGCTTTCATAATCATTTAAAGCCTT

>NZ_CP005388|3|3|1581974-1582062|CRISPRCasFinder
TTACCGCTTTCATAATCATTTAAAGCCTT	ATGTAGTTCTTGTTTTGTTTCTTGCCAACTT
TTACCGCTTTCATAATCATTTAAAGCCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP005388.1|WP_002860109.1|1582603_1582972_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002869697.1|1588038_1588176_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_074470802.1|1575952_1577245_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223650
NZ_CP005388.1|WP_002860105.1|1579448_1579952_+|conjugal-transfer-protein-TraF	unknown	unknown	gnl|CDD|239264
NZ_CP005388.1|WP_032592142.1|1583587_1583794_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002870305.1|1583109_1583337_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002860110.1|1584048_1585242_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|316042
NZ_CP005388.1|WP_002860113.1|1588186_1588555_-|hypothetical-protein	unknown	unknown	gnl|CDD|374224
NZ_CP005388.1|WP_002869698.1|1586660_1586843_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|378935
NZ_CP005388.1|WP_002860100.1|1574562_1575966_+|DUF2318-domain-containing-protein	unknown	unknown	gnl|CDD|226828
NZ_CP005388.1|WP_002860111.1|1585238_1586354_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002782344.1|1581649_1581937_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl|CDD|368240
NZ_CP005388.1|WP_002778842.1|1573940_1574480_+|iron-transporter	unknown	unknown	gnl|CDD|226001
NZ_CP005388.1|WP_002860102.1|1577234_1578353_+|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|226957
NZ_CP005388.1|WP_002860103.1|1578349_1579003_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP005388.1|WP_032592144.1|1586404_1586650_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002860108.1|1580697_1581114_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002782638.1|1587146_1588001_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP005388.1|WP_002860106.1|1579960_1580398_-|DUF411-domain-containing-protein	unknown	unknown	gnl|CDD|225564
NZ_CP005388.1|WP_002860104.1|1578999_1579488_+|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl|CDD|239264

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP005388.1|WP_074470802.1|1575952_1577245_+|ABC-transporter-permease	gnl|CDD|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	3.84182e-18
NZ_CP005388.1|WP_002860105.1|1579448_1579952_+|conjugal-transfer-protein-TraF	gnl|CDD|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	7.68116e-09
NZ_CP005388.1|WP_002860110.1|1584048_1585242_-|AAA-family-ATPase	gnl|CDD|316042	pfam13481, AAA_25, AAA domain. This AAA domain is found in a wide variety of presumed DNA repair proteins.	9.64805e-15
NZ_CP005388.1|WP_002869698.1|1586660_1586843_-|helix-turn-helix-domain-containing-protein	gnl|CDD|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.63564e-07
NZ_CP005388.1|WP_002860100.1|1574562_1575966_+|DUF2318-domain-containing-protein	gnl|CDD|226828	COG4393, COG4393, Predicted membrane protein [Function unknown].	0
NZ_CP005388.1|WP_002782344.1|1581649_1581937_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl|CDD|368240	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE. ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in.	0.00445178
NZ_CP005388.1|WP_002778842.1|1573940_1574480_+|iron-transporter	gnl|CDD|226001	COG3470, Tpd, Uncharacterized protein probably involved in high-affinity Fe2+ transport [Inorganic ion transport and metabolism].	3.41537e-100
NZ_CP005388.1|WP_002860102.1|1577234_1578353_+|FtsX-like-permease-family-protein	gnl|CDD|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	5.21042e-22
NZ_CP005388.1|WP_002860103.1|1578349_1579003_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.87069e-106
NZ_CP005388.1|WP_002860113.1|1588186_1588555_-|hypothetical-protein	gnl|CDD|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	9.52232e-09
NZ_CP005388.1|WP_002860106.1|1579960_1580398_-|DUF411-domain-containing-protein	gnl|CDD|225564	COG3019, COG3019, Predicted metal-binding protein [General function prediction only].	2.8161e-71
NZ_CP005388.1|WP_002860104.1|1578999_1579488_+|TlpA-family-protein-disulfide-reductase	gnl|CDD|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	2.39167e-15

Protein sequences

>NZ_CP005388.1|WP_002782344.1|1581649_1581937_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MQILESDLFTNELNIILSFIVRKESIKVKNTFKNDLYKALKKLDFMPYKFRKSLAFDDENVRDFIFKGYVIPYKIDKEKDLIIILGIYKENLPNF
>NZ_CP005388.1|WP_002860108.1|1580697_1581114_-|hypothetical-protein
MKKLGLVLAALVALNVSAFADLIVINKKDLVPVSASEMQNKYFQESIKSTLTEPLFKKATFYEADIVAKVGPRTYNSTQAIIQKEYSDKSNYVYYKQVLILTSNGKRARLSTLSCEIASFDKKGYLCGGTADHNYSIK
>NZ_CP005388.1|WP_002860106.1|1579960_1580398_-|DUF411-domain-containing-protein
MKKTILTILFLLTLTQAKEIQVYESPTCGCCDLWADYMKAKGYGVSVHKTNDFLKIKEKMGIKDEYQSCHTGVIEGYAIEGHVPESAIVWLLENKPKDVIGISAPGMPQGSPGMEQGYSEKYPVILMKKDGSYELYGYFIGDKKL
>NZ_CP005388.1|WP_002860105.1|1579448_1579952_+|conjugal-transfer-protein-TraF
MGIFRIQAYFFALIIALFFVACDSGENFKALNSDKTYNFAYNGFEKSLKLNDKAQNFAFVFFTKDCGVCKEQIPILQNLAKNYDFNIFVVLGDANDANDAKAWADEKGLSNLAMFYEKRAAKYLSSAIGEIYGVPVLSFFKEGKMDEKFIGLTPYSILEKEIKKVKS
>NZ_CP005388.1|WP_002860104.1|1578999_1579488_+|TlpA-family-protein-disulfide-reductase
MKKSLLILSILFLLNACSFENSKDTGKVGEKSAEISAKDTLGKAVKLADDNTSLKVLVFFQNGCPSCLKELPSLDEFIQNHPNKISVYAINSIDNANVVKVLAEQFDFKNVKVLKDDLKITNDRYAVFATPTTIIIKDGMIKDRILGEKPWEFFESKLTSLL
>NZ_CP005388.1|WP_002860103.1|1578349_1579003_+|ABC-transporter-ATP-binding-protein
MMKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNILSLMDTPSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNALENVMLSQYYHSSVDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPELLLADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK
>NZ_CP005388.1|WP_002860102.1|1577234_1578353_+|FtsX-like-permease-family-protein
MVDKFFLNELFKSISFSYQRLFIIVLSVFIGALTCSAFLNIYFDIDTKLSKELKAYGANVMISPKQDENFISNAEYEKIKENLKARALTPFLYDFLNLGSTSGVVLGTDFRALKITKPFLEVKEGSFSLNDFDENSAFLGVNLAKQLGLKAGNELQIYNPSNGKNTKLTIKGILSSNDEFDSIVLAPLSVVQNLSDRAGINYANAVVYGNFDEVKVKTQAISNEFIDAKPISSVSLSEGLVLRKIKALMFLIILVVLIIVTTSVNTTLSSIIFSRKKEIALRLALGAKKSEIFKLFASECFIVSFFASLIGAFCGIFLANVFGYLIFNSSIDFRFIAVFIALIISLIFAFLAAFFPIKRALKINVCENLKGE
>NZ_CP005388.1|WP_074470802.1|1575952_1577245_+|ABC-transporter-permease
MMLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLPKGSSLSIEIGNELYEPLKNKNYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKDDSNEIMLGEDFAKNNKLKLGDTIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGLYSSAEVRAFTIPESALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIAISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFASENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFIFGGLIALLGCLLPIKNITQLSAAGVLYGR
>NZ_CP005388.1|WP_002860100.1|1574562_1575966_+|DUF2318-domain-containing-protein
MSIYFVHFLISVLPLSILMAFITPNKKYIFKSFLVVFLGFLFGYFAFFIAAQFLKTENLIFNFDFVFIGLLLVSFIFYFWKKIEILNFILLGILSFCTALHYYFLSQDFPIFTSSLIDSEGISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLLILIESDKALANILLTLMRNSIIETHAFLVSFVGKSNYFGVFGIYVYLIFITFLAFLSLKIRKKNISKKQILDINYRKNEAKTSLINRYFSSVFISCVISFCIVLYFFMVSSKPLTIDEPKEILPDKNGKFIFDIALLRDNKLHRFAYISAEGKVIRFFLINKREDKDSPVAVFDACMICGDMGYIKKDGQLICISCNVRIFLPSVGKSGGCNPIPLKYEYDGKKITIDVKDVIAGSNYFSQIKEIEVQDPVSKTKVINTQAPFSYSYKGITYYFSNQNNYEEFKKDPTKYVEENEAQFLIQRRNDVG
>NZ_CP005388.1|WP_002778842.1|1573940_1574480_+|iron-transporter
MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQPIEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVGKWFEPFKVDYKFKYTGTPK
>NZ_CP005388.1|WP_002860109.1|1582603_1582972_-|hypothetical-protein
MEKVDYCRMSCLDGKINAFKYLLDLFLSDLENENDVKTCNMFENDTSIEYVKDMLMMMLDKIKEIVIDQDNCHHNIDMYASVYHEIIKDELGKEFTPKELKELHKKQEERLLKELLEGSKKK
>NZ_CP005388.1|WP_002870305.1|1583109_1583337_+|hypothetical-protein
MTRLEFDEKIKQLGLTRKIFADIAKVSYSGISTNWKDDKEIPSWVEPFLYYYEKGLALDELLKILEKYKNKEKLE
>NZ_CP005388.1|WP_032592142.1|1583587_1583794_+|hypothetical-protein
MTNNDFESILKKCNLSKKEFATLCDLPYPTLMNWIKADKTPNWVKSWLENYIKAQKYNKIKDLIKDDL
>NZ_CP005388.1|WP_002860110.1|1584048_1585242_-|AAA-family-ATPase
MKDYSKEINDLKKIKSQVIDKLDFKEFENIKSQINETSCNPSKIISQKNANIKNNSFVDLTQWAIRSVDLEKIEFTSLIDDFLDKGSISFLTSEANKGKTFLSFAICKHLLEFNKIRKIIYFDGDNSKITIKSRIKKSMQIGGYYFLDYPAFNYIQTSNALECGTDEIEVDFNFIVEKYLEPLMQSGGLVNVFIVFDSLFNFFNGDMNDNKKVAEFMKIIKKISHKGEATFLFIHHKGKSAENEFMGGVNFLNATDNLFKIQTSNNDGEILNIELNTKKARNFLPYNLKVDIDLNTLDLKIERAINENDTNFLTKAKEIIEQKGEILQGELLELLEKSKTDTHAIKKLESGKGLYFNIIEKSRATGGKALKYYVPLKENKTIINDIEINVEQTLFSE
>NZ_CP005388.1|WP_002860111.1|1585238_1586354_-|hypothetical-protein
MSISLFNDEIKAYIKNYYSIVDFLYLRYGLEFDKAGNERHNKSLKIKTNTCLITDFNGSFSGDIIDFIAFKENVELKEALIIFSDFNRLPTQKVGSFKPQKEPLKDNSYLKNIAYSLQANFNLANSDFIECKALEKAFFNDFRLFMHLCKLNFLKDDEFESILKDYFAFSKDDKSLAFILKDKNEIKSVAIREKLFKNELVKWFKVKGSSNKFIKLIKAKEKDLLKDYCFIFSGIKEIIVSELLGLNAVCFQSDSMMKNIHSHEQINELLNLIDNKRIVFIVENDESSFKANLELLKELIQINPLEKGYCVFNYDEVKNADFIDFLAYLMKELRQDYQRDKKGLNSFFSYMEKYFKNYFNKKMNLFLKVIK
>NZ_CP005388.1|WP_032592144.1|1586404_1586650_-|hypothetical-protein
MNNKQALEYLKSELCFIFNTRFRYFDFEIFNLLEKKIQILQKLLDFEREIKELLAILESNKKLFLKKNTFIKKEQKRQILL
>NZ_CP005388.1|WP_002869698.1|1586660_1586843_-|helix-turn-helix-domain-containing-protein
MQDTNKDFLTIQEVITLYSLSKDTQNKYRMQKKIPYIKIGKKIFYEKVKLDEWFKNHTIN
>NZ_CP005388.1|WP_002782638.1|1587146_1588001_-|hypothetical-protein
MLPSFKADFEVAIKWEKERECQEAINDKIEPYYNIEIEKAKDENYLYDYLCNSWLENPLYFIFQSEECTILNNKIEEQKIALCDFLLNNDILFNSFKIFNKLSPRERVKERENIIHNLSHFVKFSMEKFLYNTIFKSEIKKTSTQIKKDNEILVKALKILDENLKDENILKNTKIVQYHFYKFCNACRKIPAAEELKNYIFTNRLLSRNIKEYINFYIKLAINKNILFSIDFNNNKNYINACNNNFDDFMFKMQEKYKLNKREVKRKELKNAIIKAFDNYLRYN
>NZ_CP005388.1|WP_002869697.1|1588038_1588176_-|hypothetical-protein
MNLILENVSDDLAKVIKAMAKIENTKVKLKKEKKLTINGFNLSLF
>NZ_CP005388.1|WP_002860113.1|1588186_1588555_-|hypothetical-protein
MKKDINYYLNLPYKINLVKLDDGDYFAQFDDKELNKLVLMAGDGKTPNEAIEDLKNAFACYLEEALAKNEFIPEPIQKDKSKNLAITLKNSLVDEIDFYSKKMGLSRSAFLAVSAKAYIKTL

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NZ_CP045793	Campylobacter coli strain CFSAN032805 plasmid p1CFSAN032805, complete sequence	20583-20642	0	1.0
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NC_006134	Campylobacter coli plasmid pCC31, complete sequence	3801-3860	0	1.0
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NC_006135	Campylobacter jejuni subsp. jejuni 81-176 plasmid pTet, complete sequence	3812-3871	0	1.0
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NZ_CP023546	Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_1, complete sequence	21154-21213	0	1.0
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NZ_CP017026	Campylobacter coli plasmid pCC14983A-1, complete sequence	98069-98128	0	1.0
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NZ_CP017026	Campylobacter coli plasmid pCC14983A-1, complete sequence	98169-98228	0	1.0
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NZ_CP011017	Campylobacter coli strain FB1 plasmid pFB1TET, complete sequence	42271-42330	0	1.0
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NZ_CP023544	Campylobacter jejuni strain CFSAN032806 plasmid pCFSAN032806, complete sequence	5-64	0	1.0
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NZ_CP007750	Campylobacter jejuni subsp. jejuni M129 plasmid pTet-M129, complete sequence	23822-23881	0	1.0
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NZ_CP017872	Campylobacter coli strain BP3183 plasmid pCCDM183, complete sequence	43234-43293	0	1.0
NZ_CP005388_1	1.1|763195|60|NZ_CP005388|CRISPRCasFinder	763195-763254	60	NZ_CP044170	Campylobacter jejuni strain AR-0413 plasmid pAR-0413-1, complete sequence	42611-42670	0	1.0
NZ_CP005388_2	2.1|1444798|29|NZ_CP005388|CRISPRCasFinder	1444798-1444826	29	MN530981	Campylobacter phage DA10, complete genome	5993-6021	2	0.931
NZ_CP005388_2	2.2|1444864|29|NZ_CP005388|CRISPRCasFinder	1444864-1444892	29	MN530981	Campylobacter phage DA10, complete genome	32408-32436	2	0.931
NZ_CP005388_2	2.3|1444802|26|NZ_CP005388|PILER-CR	1444802-1444827	26	MN530981	Campylobacter phage DA10, complete genome	5993-6018	2	0.923
NZ_CP005388_2	2.4|1444868|26|NZ_CP005388|PILER-CR	1444868-1444893	26	MN530981	Campylobacter phage DA10, complete genome	32408-32433	2	0.923
NZ_CP005388_2	2.3|1444802|26|NZ_CP005388|PILER-CR	1444802-1444827	26	MG945660	UNVERIFIED: Microviridae sp. isolate 21385-1502, partial genome	3366-3391	4	0.846
NZ_CP005388_2	2.1|1444798|29|NZ_CP005388|CRISPRCasFinder	1444798-1444826	29	MG945660	UNVERIFIED: Microviridae sp. isolate 21385-1502, partial genome	3366-3394	5	0.828
NZ_CP005388_2	2.3|1444802|26|NZ_CP005388|PILER-CR	1444802-1444827	26	MH885472	Phage PBKP05, complete genome	28817-28842	5	0.808
NZ_CP005388_2	2.3|1444802|26|NZ_CP005388|PILER-CR	1444802-1444827	26	NC_047849	Klebsiella phage AltoGao, complete genome	41120-41145	5	0.808
NZ_CP005388_2	2.4|1444868|26|NZ_CP005388|PILER-CR	1444868-1444893	26	MN855752	Siphoviridae sp. isolate 256, complete genome	3550-3575	5	0.808
NZ_CP005388_2	2.4|1444868|26|NZ_CP005388|PILER-CR	1444868-1444893	26	MN855997	Siphoviridae sp. isolate 421, complete genome	4868-4893	5	0.808
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	MN694478	Marine virus AFVG_250M504, complete genome	19978-20008	6	0.806
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	MN694270	Marine virus AFVG_250M505, complete genome	20095-20125	6	0.806
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	MN694656	Marine virus AFVG_250M501, complete genome	19707-19737	6	0.806
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	MN693919	Marine virus AFVG_250M503, complete genome	16185-16215	6	0.806
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	MN694712	Marine virus AFVG_250M502, complete genome	16183-16213	6	0.806
NZ_CP005388_2	2.2|1444864|29|NZ_CP005388|CRISPRCasFinder	1444864-1444892	29	MN855752	Siphoviridae sp. isolate 256, complete genome	3547-3575	7	0.759
NZ_CP005388_2	2.2|1444864|29|NZ_CP005388|CRISPRCasFinder	1444864-1444892	29	MN855997	Siphoviridae sp. isolate 421, complete genome	4865-4893	7	0.759
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	NZ_CP017773	Paenibacillus crassostreae strain LPB0068 plasmid pPC03, complete sequence	32644-32674	7	0.774
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	60582-60612	7	0.774
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	94640-94670	7	0.774
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	MN657144	Pedobacter sp. strain ANT_H27B plasmid pA27BH1, complete sequence	51151-51181	7	0.774
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	NZ_LR135236	Enterococcus faecium isolate E7067 plasmid 2	87344-87374	7	0.774
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	NZ_CP019209	Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence	189029-189059	7	0.774
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	NZ_LR135220	Enterococcus faecium isolate E7040 plasmid 2	87693-87723	7	0.774
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	NZ_LR134106	Enterococcus faecium isolate E6043 plasmid 2	87693-87723	7	0.774
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	NZ_CP040873	Enterococcus faecium strain DB-1 plasmid punnamed1	31164-31194	7	0.774
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	NZ_CP040876	Enterococcus faecium strain DB-1 plasmid punnamed2	93188-93218	7	0.774
NZ_CP005388_2	2.1|1444798|29|NZ_CP005388|CRISPRCasFinder	1444798-1444826	29	MH885472	Phage PBKP05, complete genome	28814-28842	8	0.724
NZ_CP005388_2	2.1|1444798|29|NZ_CP005388|CRISPRCasFinder	1444798-1444826	29	NC_047849	Klebsiella phage AltoGao, complete genome	41117-41145	8	0.724
NZ_CP005388_3	3.1|1582003|31|NZ_CP005388|CRISPRCasFinder	1582003-1582033	31	NC_019774	Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence	26535-26565	8	0.742

1. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NZ_CP045793 (Campylobacter coli strain CFSAN032805 plasmid p1CFSAN032805, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

2. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NC_006134 (Campylobacter coli plasmid pCC31, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

3. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NC_006135 (Campylobacter jejuni subsp. jejuni 81-176 plasmid pTet, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

4. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NZ_CP023546 (Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_1, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

5. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NZ_CP017026 (Campylobacter coli plasmid pCC14983A-1, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

6. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NZ_CP017026 (Campylobacter coli plasmid pCC14983A-1, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

7. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NZ_CP011017 (Campylobacter coli strain FB1 plasmid pFB1TET, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

8. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NZ_CP023544 (Campylobacter jejuni strain CFSAN032806 plasmid pCFSAN032806, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

9. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NZ_CP007750 (Campylobacter jejuni subsp. jejuni M129 plasmid pTet-M129, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

10. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NZ_CP017872 (Campylobacter coli strain BP3183 plasmid pCCDM183, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

11. spacer 1.1|763195|60|NZ_CP005388|CRISPRCasFinder matches to NZ_CP044170 (Campylobacter jejuni strain AR-0413 plasmid pAR-0413-1, complete sequence) position: , mismatch: 0, identity: 1.0

tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	CRISPR spacer
tagatattgacatcaaaaaggcactcccttatacttgacggaaaaaggtaaaaaaaactc	Protospacer
************************************************************

12. spacer 2.1|1444798|29|NZ_CP005388|CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 2, identity: 0.931

cttcccctgttgatgatggcagttataga	CRISPR spacer
cttcccctgttgatgatggtagttatagg	Protospacer
*******************.********.

13. spacer 2.2|1444864|29|NZ_CP005388|CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 2, identity: 0.931

ttttgtttaagtgatgtttgtaagatttt	CRISPR spacer
ttttgtttaagtgatatttgcaagatttt	Protospacer
***************.****.********

14. spacer 2.3|1444802|26|NZ_CP005388|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 2, identity: 0.923

cccctgttgatgatggcagttataga	CRISPR spacer
cccctgttgatgatggtagttatagg	Protospacer
****************.********.

15. spacer 2.4|1444868|26|NZ_CP005388|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 2, identity: 0.923

tgtttaagtgatgtttgtaagatttt	CRISPR spacer
tgtttaagtgatatttgcaagatttt	Protospacer
************.****.********

16. spacer 2.3|1444802|26|NZ_CP005388|PILER-CR matches to MG945660 (UNVERIFIED: Microviridae sp. isolate 21385-1502, partial genome) position: , mismatch: 4, identity: 0.846

cccctgttgatgatggcagttataga	CRISPR spacer
cccctgttgatgatggcagtcctact	Protospacer
********************. **  

17. spacer 2.1|1444798|29|NZ_CP005388|CRISPRCasFinder matches to MG945660 (UNVERIFIED: Microviridae sp. isolate 21385-1502, partial genome) position: , mismatch: 5, identity: 0.828

cttcccctgttgatgatggcagttataga	CRISPR spacer
ctacccctgttgatgatggcagtcctact	Protospacer
** ********************. **  

18. spacer 2.3|1444802|26|NZ_CP005388|PILER-CR matches to MH885472 (Phage PBKP05, complete genome) position: , mismatch: 5, identity: 0.808

cccctgttgatgatggcagttataga	CRISPR spacer
cagctgttgatgatggcggttatatc	Protospacer
*  **************.******  

19. spacer 2.3|1444802|26|NZ_CP005388|PILER-CR matches to NC_047849 (Klebsiella phage AltoGao, complete genome) position: , mismatch: 5, identity: 0.808

cccctgttgatgatggcagttataga	CRISPR spacer
cagctgttgatgatggcggttatatc	Protospacer
*  **************.******  

20. spacer 2.4|1444868|26|NZ_CP005388|PILER-CR matches to MN855752 (Siphoviridae sp. isolate 256, complete genome) position: , mismatch: 5, identity: 0.808

tgtttaagtgatgtttgtaagatttt	CRISPR spacer
catttaagtgatgtttttaagatcat	Protospacer
..************** ******. *

21. spacer 2.4|1444868|26|NZ_CP005388|PILER-CR matches to MN855997 (Siphoviridae sp. isolate 421, complete genome) position: , mismatch: 5, identity: 0.808

tgtttaagtgatgtttgtaagatttt	CRISPR spacer
catttaagtgatgtttttaagatcat	Protospacer
..************** ******. *

22. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to MN694478 (Marine virus AFVG_250M504, complete genome) position: , mismatch: 6, identity: 0.806

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
cttttcttcttgttttgttttttgcccactt	Protospacer
 * *  **************.***** ****

23. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to MN694270 (Marine virus AFVG_250M505, complete genome) position: , mismatch: 6, identity: 0.806

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
cttttcttcttgttttgttttttgcccactt	Protospacer
 * *  **************.***** ****

24. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to MN694656 (Marine virus AFVG_250M501, complete genome) position: , mismatch: 6, identity: 0.806

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
cttttcttcttgttttgttttttgcccactt	Protospacer
 * *  **************.***** ****

25. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to MN693919 (Marine virus AFVG_250M503, complete genome) position: , mismatch: 6, identity: 0.806

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
cttttcttcttgttttgttttttgcccactt	Protospacer
 * *  **************.***** ****

26. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to MN694712 (Marine virus AFVG_250M502, complete genome) position: , mismatch: 6, identity: 0.806

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
cttttcttcttgttttgttttttgcccactt	Protospacer
 * *  **************.***** ****

27. spacer 2.2|1444864|29|NZ_CP005388|CRISPRCasFinder matches to MN855752 (Siphoviridae sp. isolate 256, complete genome) position: , mismatch: 7, identity: 0.759

ttttgtttaagtgatgtttgtaagatttt	CRISPR spacer
atacatttaagtgatgtttttaagatcat	Protospacer
 * ..************** ******. *

28. spacer 2.2|1444864|29|NZ_CP005388|CRISPRCasFinder matches to MN855997 (Siphoviridae sp. isolate 421, complete genome) position: , mismatch: 7, identity: 0.759

ttttgtttaagtgatgtttgtaagatttt	CRISPR spacer
atacatttaagtgatgtttttaagatcat	Protospacer
 * ..************** ******. *

29. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to NZ_CP017773 (Paenibacillus crassostreae strain LPB0068 plasmid pPC03, complete sequence) position: , mismatch: 7, identity: 0.774

atgtagttcttgttttgtttcttgc----caactt	CRISPR spacer
ttgtagttcttgttgtgtttgttgcattgca----	Protospacer
 ************* ***** ****    **    

30. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to NZ_CP040906 (Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence) position: , mismatch: 7, identity: 0.774

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
ctgtatttcttgatttgtttcttgaaagatt	Protospacer
 **** ****** ***********  *. **

31. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to NZ_CP040906 (Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence) position: , mismatch: 7, identity: 0.774

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
ctgtatttcttgatttgtttcttgaaagatt	Protospacer
 **** ****** ***********  *. **

32. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to MN657144 (Pedobacter sp. strain ANT_H27B plasmid pA27BH1, complete sequence) position: , mismatch: 7, identity: 0.774

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
ctgtaggtcttgttttgttttttggtagcat	Protospacer
 ***** *************.*** .*.* *

33. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to NZ_LR135236 (Enterococcus faecium isolate E7067 plasmid 2) position: , mismatch: 7, identity: 0.774

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
ctgtatttcttgatttgtttcttgaaagatt	Protospacer
 **** ****** ***********  *. **

34. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to NZ_CP019209 (Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence) position: , mismatch: 7, identity: 0.774

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
ctgtatttcttgatttgtttcttgaaagatt	Protospacer
 **** ****** ***********  *. **

35. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to NZ_LR135220 (Enterococcus faecium isolate E7040 plasmid 2) position: , mismatch: 7, identity: 0.774

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
ctgtatttcttgatttgtttcttgaaagatt	Protospacer
 **** ****** ***********  *. **

36. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to NZ_LR134106 (Enterococcus faecium isolate E6043 plasmid 2) position: , mismatch: 7, identity: 0.774

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
ctgtatttcttgatttgtttcttgaaagatt	Protospacer
 **** ****** ***********  *. **

37. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to NZ_CP040873 (Enterococcus faecium strain DB-1 plasmid punnamed1) position: , mismatch: 7, identity: 0.774

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
ctgtatttcttgatttgtttcttgaaagatt	Protospacer
 **** ****** ***********  *. **

38. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to NZ_CP040876 (Enterococcus faecium strain DB-1 plasmid punnamed2) position: , mismatch: 7, identity: 0.774

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
ctgtatttcttgatttgtttcttgaaagatt	Protospacer
 **** ****** ***********  *. **

39. spacer 2.1|1444798|29|NZ_CP005388|CRISPRCasFinder matches to MH885472 (Phage PBKP05, complete genome) position: , mismatch: 8, identity: 0.724

cttcccctgttgatgatggcagttataga	CRISPR spacer
gcacagctgttgatgatggcggttatatc	Protospacer
 . *  **************.******  

40. spacer 2.1|1444798|29|NZ_CP005388|CRISPRCasFinder matches to NC_047849 (Klebsiella phage AltoGao, complete genome) position: , mismatch: 8, identity: 0.724

cttcccctgttgatgatggcagttataga	CRISPR spacer
gcacagctgttgatgatggcggttatatc	Protospacer
 . *  **************.******  

41. spacer 3.1|1582003|31|NZ_CP005388|CRISPRCasFinder matches to NC_019774 (Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence) position: , mismatch: 8, identity: 0.742

atgtagttcttgttttgtttcttgccaactt	CRISPR spacer
gttaagctcttgttttgattcttgccatagt	Protospacer
.*  **.********** *********   *

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	758642 : 765335	7	Streptococcus_phage(66.67%)	transposase	NA
DBSCAN-SWA_2	1355179 : 1362074	7	Synechococcus_phage(28.57%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP005388|758642:765335|DBSCAN-SWA
AATGGCAAAATCATTATTTGAGGAACTGGGCGGCAAATACGAAAGGCAAGGGGATTATTTGATACCGTGCTTAACTGTACCCGCCGAAGAAGAACAGGCAATAGGCATCTGGGGGCAACGGCATTTAGATTATCTAAAACAGTACCGTAAAGTTACATACACCAATCTTCTTACAAGCGGCAGGCTAAACGCCTACCTTGCCGACATCAACAGACAGGCACAGGAACGCTTTGAAAGGCTCATAGAGGGTATGAAACAGGCACAGGGCATAACGGAACAGCTAAAGGCAGAAAACGCCTTAGAATGGACAGGATGCCTCAATAACATAAGGGCTTGTGCGAGGGAGATTGTGGAAAAGGAAATTATTTTTGCATAAACAGATGATTAGTGGCAGGGGGAAATCCTGCCGCTTTTTCTGCTTTAGTTTGTCAGCTTGACAAATAAAGGGTTAAGGAATATAATTAGATTCAGTATTATACAAGGAGTTAATAAATATGCGGCAAGGTATTCTTAAATAAACTGTCAATTTGATAGTGGGAACAAAAAGTAGCAGTCCCGTTTCACTTTTAATATGGGGCTTAGTTTTTTGTACCCAGTTTAAGAATACTTTTATCATGTAATTTTATATGCCCGAAAACATATAAGTGTTTTGGGGCTATTGGAGTTATTTACCCAGTGATAGGAGTATTTATCACTGGGTATTTTTATGCCCTTTTTTGGGTGTTGATAGGAAGAAAATCACATGAAAATAATTAACTTAGGCATTCTGGCTCACGTTGACGCAGGAAAGACAACATTAACGGAAAGTTTATTGTATACCAGTGGTGCAATTGCAGAACTAGGGAGCGTAGATGAAGGCACAACAAGGACAGATACAATGAATTTGGAGCGTCAAAGGGGAATCACTATCCAGACAGCAGTGACATCTTTTCAGTGGGAGGATGTAAAAGTCAACATTATAGATACGCCAGGCCATATGGATTTTTTGGCGGAAGTATACCGTTCTTTATCCGTATTAGACGGAGCAGTATTATTAGTTTCTGCAAAGGATGGCATACAGGCACAGACCCGTATACTGTTTCATGCACTACAGATAATGAAGATTCCGACAATTTTTTTCATCAATAAAATTGACCAAGAGGGGATTGATTTGCCAATGGTATATCGGGAAATGAAAGCAAAGCTTTCTTCGGAAATTATAGTGAAGCAAAAGGTTGGGCAGCATCCCCATATAAATGTAACGGACAATGACGATATGGAACAGTGGGATGCGGTAATTATGGGAAACGATGAACTATTAGAGAAATATATGTCAGGGAAACCGTTTAAAATGTCAGAACTGGAACAGGAAGAAAACAGGAGATTCCAAAACGGAACGTTATTTCCCGTTTATCACGGAAGCGCTAAAAACAATCTGGGGATTCGGCAGCTTATAGAAGTAATTGCCAGTAAATTTTATTCATCAACGCCTGAAGGTCAATCTGAACTATGCGGGCAGGTTTTTAAGATTGAATATTCAGAGAAAAGGCGGCGTTTTGTTTATGTGCGTATATATAGCGGAACATTGCATTTGAGGGATGTTATTAGAATATCTGAAAAAGAGAAAATAAAAATCACAGAGATGTATGTTCCGACAAACGGTGAATTATATTCATCCGATACAGCCTGCTCTGGTGATATTGTAATTTTACCAAATGATGTTTTGCAGCTAAACAGTATTTTGGGGAACGAAATACTGTTGCCGCAGAGAAAATTTATTGAAAATCCTCTCCCTATGCTCCAAACAACGATTGCAGTAAAGAAATCTGAACAGCGGGAAATATTGCTTGGGGCACTTACAGAAATTTCAGATTGCGACCCTCTTTTAAAATATTATGTGGATACTACAACGCATGAGATTATACTTTCTTTTTTGGGGAATGTGCAGATGGAAGTCATTTGTGCCATCCTTGAGGAAAAATATCATGTGGAGGCAGAAATAAAAGAGCCTACTGTTATATATATGGAAAGACCGCTTAGAAAAGCAGAATATACCATCCACATAGAAGTCCCGCCAAATCCTTTCTGGGCTTCTGTCGGGTTGTCCATAGAGCCGCTCCCTATTGGAAGCGGAGTGCAGTATGAAAGCAGAGTTTCACTTGGATATTTAAATCAATCGTTCCAAAATGCGGTTATGGAGGGGGTTCTTTATGGCTGCGAGCAGGGGCTGTATGGATGGAAAGTGACAGACTGTAAAATCTGTTTTGAATATGGATTGTATTATAGTCCTGTAAGTACCCCCGCAGACTTTCGGCTGCTTTCCCCTATCGTATTGGAGCAGGCTTTAAAAAAAGCAGGGACAGAACTATTAGAGCCATATCTCCACTTTGAAATTTATGCACCGCAGGAATATCTCTCACGGGCGTATCATGATGCTCCAAGGTATTGTGCAGATATTGTAAGTACTCAGATAAAGAATGACGAGGTCATTCTGAAAGGAGAAATCCCTGCTAGATGTATTCAAGAATACAGGAACGATTTAACTTGTTTCACAAATGGGCAGGGAGTCTGCTTGACAGAGTTAAAAGGATACCAGCCAGCTATTGGTAAATTTATTTGCCAACCCCGCCGCCCGAATAGCCGTATAGATAAGGTTCGGCATATGTTCCACAAGTTAGCTTAACAGCTTGCAAAAGTCATATAAAATGAGATTTGAAAGGATTAGAGACTAATTATGATGAAATGCGAATGGATATTGTGTCCTGTTTGTGGGAGCAAAACCCGTAATAAAATTAGGAAGGACACTGTTTTGGAGAATTATCCCCTTTATTGTCCAAAATGCAGACAAGAAAGATTGATTAAAGTTGACAACTTGAAGATAACTGTCATCAAAGAGCCAGACGCTTAAGACGCAGAGCCGATGAAATTGTGGAACAATTCACGAATCATCGGCTCTTTTTGTTTCGTATTTGAAAGAACAAACTCACCAAATAAAAAAAACGATATTCGGGTGGGTTATTTTGTTATACCCTAAATTACCCTCTGAGTAAGCACGACCTTAAAGACTTAAAGGAACGGTGCAACGAGCAGAGCTGGGAACAGGGCTTGCATGTGCCGGAGAAAGGAAAGACATTTGCTGGAGAAGTCCGGGAAGAAACGGTGGCATGGAGCAAAGACACCTACCAGCTTTTGAAACAGGCAGAGCAGGGAAAGGTCAAAAGCTATGTGCAGGATATTGCCCTTGCGGTGCTGGATTGTAAGGAAACAGCGACCAGCCGGGAAACCTTTATCCGGCTGATGAATGAAAGAGGGTACGGGGTGGACTGGCAGGACAGCCACAAGTACATCACATATACCGACTTAGCCAGGGAACAGGCAGGAGAAAAGGCTTGTAAAATCAGGGATAACAAGCTGGAAAAATACTACAATATGGATTTTGGAAAGGAGAGTATGGAGCATGAGTTTGAGAGAAATGCACGAACAGCAGAAGCAGAGCAGTCCAAGAGAGCAGCTTCAAGAGTTAAACCGACAGAGCCGGACAGAGCTGGAAAACAGTCTGCTCAAAGAAGCGTTGGCGATGTCGAGCGAGAACTGCGAGGAATTGATGAAGCAGTCAAATCAAGAACAAGTGAGGGCAGAGCAGAACAGGCAGAGAGACGCAGAGCAGAACAGGAAGCTCATCAGCGAGCTGAAGCAGAGCGTAGAGCTGCTGAAGAACAGCAACGAATTGCTTCAAGACGCTATATCGGGCGAGATTGGGAGCCTGAAAGATGAGGTTAAGGAAAACACCGTCCAAGAGGTTAGAAAGGCGTTACAGGCGAATATAGAGGCTATACAGAGGGCTACAAAGCTTCTTGAGAAGCAGTCTGATACACTTACGAGCGTGATGAAGCAGAAGATCCGGGAGCTTGAGGAAAGTAAGAACAGTTTTTTTAGATATGAGGGCTTGAAGTTGTACCTGTTTTGGGGCGGTATGGTCTGCAATATTTTAGTGTTTCTTATGCTGTTGTATGGTATGATTAGTAAGTAAAAAGAAATCGATAAATTAGAATTTGACGGGGAGGTCTCATGAGGACAGAATATAAACACAATCCGCCCATTCCATATAGTCTGCATGATATGCGGGTCAAAAAGATTATAATTCAAGATAAAACAATAGTCCTTGAATTCGAGGACGGATATGAAAAACTTACAGAACCTTTTGAACAGGTCGAGGGAAACATCACAATCGAAGGTGTGGATTTTGATTGTACCTGCGTTATGTTGCAGAGCAAATGGGGAAACTATGGAAAATTCAACGGTGAGAAATTAGAACTGGAACGCTTTATAAAGAGATACAAAAACTATAGCTTTGAAATTGTAGATGAATTATACGGGTATAATCAAGTATTGTATTCTGGTTATTTATCTATCTTAGAAACAGAAGATTTAGTTCAAATGGACATTTCAATTTACTTTACGGGCAAAATTATTTACGATACAAAAGAGTAACAAATTCCAGTTTGTCGGTACGAAGAAAAAGGTGCAAAAATGTATTGATAAGATTAGCGGTCAAGGCGAGAGGGAGTGAGGTGTAGATATTGACATCAAAAAGGCACTCCCTTATACTTGACGGAAAAAGGTAAAAAAAACTCATTGATAAGATTAGCGGTCAAGGCGAGAGGGAGTGAGGTGCAAAAGACTATGGCAAAATACACCAAAAGGAGAGATAAAAGAGGGTATGAGTGGAAGTCTGCTTATCGGGAGAAAGAAGCCGTTCCTACAAACCTATAAAATCCTATAAAAAGATATAAAACTCTATAAATAGGATTTTTGTTGTATTCCTGTTTCAACCTTGCTAGTTGCTATTTGATTTATTGCTAAATCATTTAACAGAGCTGTCAAGTCCGCAGGCGTAAATTCGGCAAGAACTTTGCCTATTTTTTGCTTTAATTGTGAAAGCAAATTAAGACTAGCATTGTAGTCTCTATCAATGCTAATTTCACATTCATCGCAAATATAAACTCTATCTTTTAGAGCTAAATTTTCTTTTATAGTTCCACAATTAGAGCATAATTTAGAACTAGGATAAAATCTATCTACTTGATAGATTTCTTTATCGTTGTAGCTAGATTTATATTCTAGTTGCCTTTTAAACTCATAAAAACTTACATCGCTTATAGATTTAGCAAGTCTATGATTACTCATCATCCCTTTTACATTTAAATCCTCTAAGCAAAAATATTTAGCATTTGCTACCAAGCTAGAAGTAAGCTTGTGTAAAAAATCACTTCTTATATTTGCTATTTTACGATGCAATTTATTTAGCTTAATACTTGCTTTTAGATAATTGCTAGATTTTTTAATGCCTTGTAATGCTTCTTGCTTGGTTTTTGCGTGTTGCTTTTTGCTTAGCTGTCTAGCTCTTTTTATCATTAAGCGATTAAACTTAGCTAATGGTTTAGGTGCTTTTATCTCTAAGCCATTAGATAAACTTAAAAACGATTTTAAGCCTACATCTATGCCAAGTGCTAGATTATTATTTTTAGCTTTATTATGAGTTTTTAGATACTCATCTTTACTAATTTGCATACTAAAAGAAACAAAGAATTTATCAGCACTTTGAGAAATAGTAAAAGAATTGATTTTACCATTAAATCTCAATTTCTCTTTCATTTTTACAAGTCCTAAATTTGGCACTTTTAGATATTTTTCATCTTTGATTATTGCTTGGTCTCCACCTATGTAATAAGAGCCGAAATTATCTTTCTTTTTCTTAAATTTTGGATAGCTTACTTTACCTTGTTTTAAATCTCTAAAAAATTTTTGAAATGCTAGATTTAGATTTAAAAAAGGCTGTTGCGTAGCATATTTACTTACTTCATACACAAAGGGGAATTGTTCTTTTTTAATGGCATTAAATTCCTTTTTTAAATCTAAATGTGTTACTTTAATGCCTTGCTTGTAGTATTCTTGCCATTTTGCAAGTCCCCAATTATAAGCAAGTCTAGCACAACCAAAGGCTTTTTTAAAATGAGTTTTAGCTTTATTATTTGGCTTTAACTCTATCTTATGAGAAATGCTAATAAGCTCATTATTATTTGCTGACATTTTCTACCACCACTTCTTGCATTTCATCTAAAAGTTTTTTATTTTTCTTTGAGCGTGAGCCATAAAGTCTAGCTGAAAATACTGTGATTATTTCCAACACATCTTTGGCTAATTCTTCTTCAAATTTTACGCTTTCTTCGCCTTTATTTATTATTATTACTTCTACTTCTTTGGCTTCACATATAGCAAATACTAGCTCAGCACCAAAGCGTAAAAGTCTGTCTTTGTGAGTTAAAACTAATCTTTTTACTTTGCCATCTAGAATTTGATTTAGCAATTTAGTTAAGCCTTTTTTATAATAATTCATACCAGAGCCTAAATCTTGTATAACTTCATAATTAAAGCCTTGTTTAGAACAATATAGCTCTAAGACTTGAACTTGCCTTATTAAATCATCTTTTTGGTCGTGGCTAGAAACACGAGCATAAGCAATAGTTTTTAAGCTATCTTTATTAAAAACTAGGTTTTTATTTATAGCTTTTAATGTTTCTAGCTTATACCTACGCTCTCCACCCTTAGTCATATCATCAGGTTTTAATAAGCCTTTTTTATCCCAATTTCTAAGAGTTTGGATAGTAACACCAAGAGCTTTACTAGCTTGACCGATTGATAATAATTTATTCAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP005388|758642:765335|758642_759017_+|WP_001129922.1|DBSCAN-SWA
MAKSLFEELGGKYERQGDYLIPCLTVPAEEEQAIGIWGQRHLDYLKQYRKVTYTNLLTSGRLNAYLADINRQAQERFERLIEGMKQAQGITEQLKAENALEWTGCLNNIRACAREIVEKEIIFA
>NZ_CP005388|758642:765335|764696_765335_-|WP_002782963.1|transposase|DBSCAN-SWA
MNKLLSIGQASKALGVTIQTLRNWDKKGLLKPDDMTKGGERRYKLETLKAINKNLVFNKDSLKTIAYARVSSHDQKDDLIRQVQVLELYCSKQGFNYEVIQDLGSGMNYYKKGLTKLLNQILDGKVKRLVLTHKDRLLRFGAELVFAICEAKEVEVIIINKGEESVKFEEELAKDVLEIITVFSARLYGSRSKKNKKLLDEMQEVVVENVSK
>NZ_CP005388|758642:765335|763417_764710_-|WP_002807694.1|transposase|DBSCAN-SWA
MSANNNELISISHKIELKPNNKAKTHFKKAFGCARLAYNWGLAKWQEYYKQGIKVTHLDLKKEFNAIKKEQFPFVYEVSKYATQQPFLNLNLAFQKFFRDLKQGKVSYPKFKKKKDNFGSYYIGGDQAIIKDEKYLKVPNLGLVKMKEKLRFNGKINSFTISQSADKFFVSFSMQISKDEYLKTHNKAKNNNLALGIDVGLKSFLSLSNGLEIKAPKPLAKFNRLMIKRARQLSKKQHAKTKQEALQGIKKSSNYLKASIKLNKLHRKIANIRSDFLHKLTSSLVANAKYFCLEDLNVKGMMSNHRLAKSISDVSFYEFKRQLEYKSSYNDKEIYQVDRFYPSSKLCSNCGTIKENLALKDRVYICDECEISIDRDYNASLNLLSQLKQKIGKVLAEFTPADLTALLNDLAINQIATSKVETGIQQKSYL
>NZ_CP005388|758642:765335|759383_761303_+|WP_002860782.1|DBSCAN-SWA
MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTDTMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAVLLVSAKDGIQAQTRILFHALQIMKIPTIFFINKIDQEGIDLPMVYREMKAKLSSEIIVKQKVGQHPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYHGSAKNNLGIRQLIEVIASKFYSSTPEGQSELCGQVFKIEYSEKRRRFVYVRIYSGTLHLRDVIRISEKEKIKITEMYVPTNGELYSSDTACSGDIVILPNDVLQLNSILGNEILLPQRKFIENPLPMLQTTIAVKKSEQREILLGALTEISDCDPLLKYYVDTTTHEIILSFLGNVQMEVICAILEEKYHVEAEIKEPTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIEPLPIGSGVQYESRVSLGYLNQSFQNAVMEGVLYGCEQGLYGWKVTDCKICFEYGLYYSPVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPRYCADIVSTQIKNDEVILKGEIPARCIQEYRNDLTCFTNGQGVCLTELKGYQPAIGKFICQPRRPNSRIDKVRHMFHKLA
>NZ_CP005388|758642:765335|761354_761528_+|WP_002779755.1|DBSCAN-SWA
MMKCEWILCPVCGSKTRNKIRKDTVLENYPLYCPKCRQERLIKVDNLKITVIKEPDA
>NZ_CP005388|758642:765335|762688_763111_+|WP_002801797.1|DBSCAN-SWA
MRTEYKHNPPIPYSLHDMRVKKIIIQDKTIVLEFEDGYEKLTEPFEQVEGNITIEGVDFDCTCVMLQSKWGNYGKFNGEKLELERFIKRYKNYSFEIVDELYGYNQVLYSGYLSILETEDLVQMDISIYFTGKIIYDTKE
>NZ_CP005388|758642:765335|761725_762394_+|WP_002804229.1|DBSCAN-SWA
MHVPEKGKTFAGEVREETVAWSKDTYQLLKQAEQGKVKSYVQDIALAVLDCKETATSRETFIRLMNERGYGVDWQDSHKYITYTDLAREQAGEKACKIRDNKLEKYYNMDFGKESMEHEFERNARTAEAEQSKRAASRVKPTEPDRAGKQSAQRSVGDVERELRGIDEAVKSRTSEGRAEQAERRRAEQEAHQRAEAERRAAEEQQRIASRRYIGRDWEPER

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001129922.1|758642_759017_+	TnpV protein	D0R0F4	Streptococcus_phage	6.6e-64	96.8
WP_002860782.1|759383_761303_+	tetracycline resistance ribosomal protection protein Tet(O)	A0A1B0RXH7	Streptococcus_phage	0.0e+00	98.4
WP_002779755.1|761354_761528_+	cysteine-rich KTR domain-containing protein	D0R0F6	Streptococcus_phage	4.6e-28	100.0
WP_002804229.1|761725_762394_+	hypothetical protein	D0R0F7	Streptococcus_phage	1.1e-56	99.1
WP_002801797.1|762688_763111_+	hypothetical protein	NA	NA	NA	NA
WP_002807694.1|763417_764710_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1S5RFS3	Helicobacter_phage	4.2e-142	62.9
WP_002782963.1|764696_765335_-|transposase	IS607-like element ISChh1 family transposase	A0A1S5RGS9	Helicobacter_phage	1.6e-97	86.8

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP005388|1355179:1362074|DBSCAN-SWA
TTTAAAAATGGCTTTGGTTGGTTGTAAAATTATAATAATCCTCAGGCACACCAATATCTATAAAATAATCATCAAAAATATGAGCTTTAGCTTTTAGTTTTTCATAATTTTCTCGTAAAAACTCTTCAAAAGAAAATTTTTTCTCTAAATCAAATTCATTAAAAATATCTTTAGTTAAAAGATAAATTCCACCATTGATTAAACCCTGATTTTTGAATATTTTTTCCTCAAAAGAAATCACAAAACCTTGCTCATTAACATTTACTGTGCCATATCTATCAAAATCATTCATTTGTTTTAAAGCAAGGCAAATTTTACTTCCATTTAGCTTTAATTTGCTTAAATCTATGCCAAAAAAAGTATCGCCATTTAAAACATAAGTCTCGTTTTTTATAATTTTCAAAGCCTCTTTTATAGCTCCACCCGTTCCTAGAGGCTCTTTTTCTATACTGTATTTTATTTTTATGCCTAAAAACTCATCTTTAAAATACTCTTTTATCACTTCATATTTGTATGATACCGCTAAGATAACTTCTTTTATGCCTTGCTTTTTAAGATACTCAAAAATAAATTCTAAAAAAGGCTTATCATTTATCGGTGCCATAGGCTTTGGAATGTCTTTTATAACACTTTTAAGCCTTGTTCCTAAGCCGCCACAAAGTATTATTGCTTGCAAGAAAAACCTTTGCCAAAAAGCTCTTCTTCAACGATAGCACAAATAATATGTCCTATTAAAATATGTGCTTCTTGAATTCTTGGTGTGCAAGTTGAAGGTACTTTTATACAATAATCACAAAGCTCATTCATAGCCCCGCCATTAGCTCCGCTTAAGCCTATGCTTATGATTTCTTTTTGCTTGCAAAGCTCTAAAGCCTTTAAAATATTTTTACTATTTCCACTTGTAGAAATTCCTATAAAAACATCTCCTTTAACACCCTGTGCTTGCACTTGTCTTGCAAATAAATTTTCATAACCATAGTCATTGCCAATAGCTGTTAATATGCTAGTATCTGTAGTAAGTGCAATACTTGCGATACCGGGTCTATCAAAATAAAACCTACTTACAAATTCTCCTGCGATATGCTGTGCATCTGCAGCACTACCACCATTTCCTGCAAGTAAAGTTTTGTTACCATTTTTATAAGCTTTTATGACTTCTAATGAAGCATTTTTAATAAGAGTTATCAAATTCTCATCTTTTAAAATTTGCTCTTTTACTAAAATTGATTCTTGAAAATGTTCTTTTATATAAGAATTTAAATTCTCCATGATTTAACCCCCTCTTTTGTAAATGAAAAATCTTGCACATAACCTTGCTCTTTACTTAAAGCTTTGATTAGGTTGTATTTTTTAGTAGGATCTACAAAGAAAAACATAAATCCACCTGCTCCTGCTCCACTAGTTTTGCCACTATAAGCTCCATTTTGCATAGCTAAATGATAAATTCTTTCAAGCTCATCATTGCTAACGATTTCTGAAATGATTTTTTTTGACTGCCAAGATTTTCCTAAAATTTGTGCCAAAGTATCAAAATCCGCCTTAAACAAAGCTTCTTTCATCTTTATAGCATCTTGTTTTATAGCGTGCATAGCTTCAAGGGATTTTTCATCTCCGAGCTTTCCTTTTTTATGTTCTTCTATATCTTTTGCTTCTCTTGTAATATTTGTAAAATAAAGCACAGTTCTAGCTTCAAGCTCACTAGCTATCCAATTTTTAATACGCAAAGGATTAACAATGACTCTTTTATTATCATAAAATTCCATAAAATTAAAACCACCAAAAGTTGCGGCATATTGATCTTGTGCTCCGCCTACTATGCCTAAATCTTCTCTTTCTATCTCATAAGCAAGCTTAGCGATTTCATATTCTCCTAAAGGTAGATTAAGCCATTCTGCAAAGGCTTTTATAACCCCTACAACCAAAGTTGAGCTTCCGCCCAAACCACTACCACTTGGTACATCTGAGTATGTATGCAAAGAAAAACTTAAAGGTTTTTTTGTAAAATCTTTTACAATGCGATTATAAATACTTTTAAAAATATCTAATTTTCCATCATTTCCTAAGAATTCTTTACTTTCGTACTCAGAGTAAGAATTTGTATCAGGCGAATCAAAAATGATTTTTCCATCTTCTCTTTCGATCAAAGTGCAATGTATATATAAAGATATAGTCGCATTTAAAACATAACCTGTGTATTTATCACAATATAAATTTATATCAGTTCCACCACCTGCTAAACCAAGGCGAAGAGGAGTTTGCGTGCGTATAGTTTTCATTGAATTACTACTTATTTTGCTATAATTTATTATAAAATTATAGCAAAATATACTTAACTTCTATATAATATTATTTAAACATTTGCAAAGCGATTAACTTTCATCATTTTAAACGCTCTTAAAAGTTCTTCAATGCCATCTTCTAAAGTATTATCTGGTTTCCAACCTGTAGCCTCTAATTTAGCATTTGAAACCAAATAATCTCTTTTATCCGGATCTTCACCTATACTAGCTGAATGGATATAAAAATCAGGAACATACTTTTTAATCGTTTCAGCAAGCTGTCTTTTAGTCAAATTTGCAGAACTTAATCCCATATTATAAGCCTGACCCTTCATCTTATCATAATTCTCAATTCCATGAATAAATCCTTTAACCACATCACGAACATGAATATAATTGCGTCTAAAATGCTCTTCAAAAAGCACTATAAATTTATCTTTATATGCACGATAGGTAAAATCATTAACAAGTAAATCAAGTCTCATTCTAGGTGAAATTCCAAAAACAGTAGCCAAACGAAAAGTTACACAATTTCCTTTATCAAGCAAATATTGCTCCGCATGCACTTTATCAATCCCATATTCTGAGATAGGACGCAAGGGAGATTCTTCAGTGCACATTGCATCTTTTTCTCCTATACCATAACCGCTATTTGTATTGGGATAAATAAATATTTGAGAAGGACTTGCAAAATCGCTTATCATTTTTACAGCTTCATAATTGATCATTTTGGCTAATTTTGGATTTCTTTTGCAAAGTGGAGCTCCAACCAAAGCAGCTAGGGGAATAATAATATCAGCTTTTGCTACCTCTTGTCTAATAAGATTTTCATCCATAGCATCACCATTTATAAAAGTAAAATTTTTATTATGAGAACAAGATAAAAGAGAGATTTGATCAAACATCAAATTATCAATCACACAAACTTCATAACCTTTTTCAAGTAAAATCGGTGTTAAAACCGAACCTATATAACCTGCACCACCTGTAATTAAAACTTTTTTTGACATATTTTTCCTTTAAATCGATGGTTTTATCGATTTAAAGGAATTCTGCCTCTCTTAATTTCATTTCTCCAATGATTTAGCAAATCTTTAAGCATTTGTCTAACAGGAATTTCAGCTTTCCAATCGATAAAACTCTTTATTTTACCATTATCAAACATTTGATAGTCAGCATCAATAGGACGCATCCTATCTTCAACTTGTCTTACCTCAATACCCCCCCCCATATCACTAAAATTTAGCAATATATCTATAACTTCAGGAAGTTTAAAGGCTTCTTCTCCTGCTATATTAAAAGCTTCCCCACAAGGAACTTTTCCTTTTTCACTTTCAAGAGAAAGTAGATAATAAGCCCTTATAGCATCACGGCAATCTTGAAAAGTTCTTACACTAGATAAATTGCCCACCTTAATGACAGGCTCTTGATAGCCCGCTTCAATCAAAGCAATTTGTTTTGCAACTGTGCTTTCAAAAAACACATCAGAACGTCTTGGGCCACTATGTGTTCCCATTCTTGTAACAAAAGTGCGAATGTTATAAGCTTCGCCATAAAATCTTCCCAAATAATCAGTGCCAATTTTGCTTATACTGTAAGGACTTGCACCGTGAAAAGCTGTTTCTTCATTAAGCTTAACACCTGCTTTTGCTTTACCATAAACTTCACTTGAAGAGCAAATATGCACTACAGGGTCATATCCATCTTTTGCCTTTAAAATTCTAATGTTTTCCAAAATATTTGCTGTGCCTATTATGTTAGTCTGTAAAGTTTCTATAGGTATATCAAAAGAAGTTTTTGGATAAGACTGAGCTGCTAGGTGAAAAATCACATCAGGCCTTTGACTCTCAAAAAGTTTTTGAAGACTAGAGTAATCATTTAAATCTGCATAAAAAATACTGATTCTATCTTTTTTATTGATCCTATCACTTAAATGATAGATATTATCCATAGGTTCTTGCCAACGCATCATACCTATAACATCATAGTCTGTGTTTTCTAGCAAGAAATCTGCCATTTGAGAACCAACTTGCCCTGTAAATCCTGTAATTAATGCTGTTTTTTTCATGATTTTTCCTATTGTCTTATATTTTGCTCTTTTAAATACCATTCATACATCATCTTAATGCCATCTTCAAGTTCAATTTTATGTTTCCAGCCTAAAGAATGAATTTTTGAGCAATCTGTAAATTTCTGCATTGCTCCATCTGGACGATTTAAATTAAAAACTAATTTTCCCTTAAATCCCACTATATTTTTGATTAATTCTGCTAATTCTTTGATAGTGATATTCTTATGTGGGCCTATATTTAAATGAGTATTGATAATCTCAGTATTATCACTTTTTAAATCTTTAAAATCTATATTATTCATAATAAACAAGCAAGCGTTTGCTAAATCTTGACTATGTAAAAATTCTCTTGTCGGTTTTCCGCTACCCCAAATTTCAACATTATCCTTATCTACGCCAAATTTTTTTAAATAATTCTTAGCTTCTTCAATGGAATCAAATTTTAAATCATTTAATAAGTCCTCGTATCGCTTTTCATTTAAAAGCTTGGCTAAATGCATTTTTCTTAAAATTCCAGGCAATACATGAGATTTTTCAAGATCAAATTTGTCATTATTACCATATAAATTTGTAGGAGTGATTGCTATAAAATTTGTATTGTATTGCAAATTATAACTTTCACAAAGCATCAAGCCTGAAATTTTAGCGATTGCGTAAGGTTTGTTAGTATACTCAAGATCTCCACTTAACATTTGCTCTTCACTAGTTGGCAATGTTGCATTTTTAGGATAAACCGTAGTTGAAGCTATGAAAAGTAGCTTTTTTACTTTATGTAAATAAGCATTATGAATAACATTGCACTCTATCATTAAATTTTGATAAATAAAATCAGCACGATAAGTATTATTAGCTAGAATTCCACCCGCTTTAGCTGCTGCTAAAATAACATACTCTGGCTTTTCTCTCTCAAAAAAATCAGCCACAGCTTTTTGATTTGTTAAATCGAGCTCAAAGTGAGTTTTAAAAACAAGATTTTTATAACCTTGTTGCTTAAGTTCATTAAGTATAGCACTACCAACAAGACCACTATGACCCGCTATATAAATTTTAGAATCTTTTTGCATCATTTATCCTTAAAATCTTAATGGAATTTCAGGATTAGATGGCCAAACTGGAAAATCTAAATTTTGCAAATTTCCGCATTCTTTTCTGTAATGTAAACCCTGCATTAAATTTAACTCATTTCTTCTTAGATAACTTACTTCTAAGGTAGTGCTAAAAAATAATCCCTTAGAATAAAAAATCTTTCCGTGATTATTTAAATGTGTATGTATTGGAATAAAATATTCATTAAGTTTTTTTAGTAAACTTATTCTTTTTTCAACCCCATCTTGCTCTTCAGGATTACACCCATGAAATTCAAATATAACTTGTGAAAAATATTTATTTAAAATACTTATATCAATATTTTCAAGCATATCCCATTCACAATTTTCAATATCACATTGCAAAATATTTGGCCTACTCTCATCTAAATTATTATCTTTTAAAGCTTGTGCTAAAGTAATTGTATTTTCGTTGTTTATATTGCCTATAAATTTTTTATGAAAAATAATATTTTCATGACTATAAGGACATTTTTCTATGCTAGCATCATATTCAATTACCTTAAATCCTCTTTGAGCCATTTCCAAATCCCAAGGAGAACTGTCTGAAACACCTAAAGAAAGAGCTTTCGCATCAATATTGCTCATATACCCCCCCCCCATTATACATTACATAACCACCATCTCCATTACCACCAATTCTTAGTAAATCATACAAAGGCAGTTCCAAAGGTCGAATAAGATTTAAATAATTTACAATATTCCTATAACACTGCTCATTGTTATTTATGCGAATATAATTTCTATCTCTATCTTGTAATAATAGGAATAAAATTTCTTTATCTCTTTTATCAATATCTAAATTTGAAATAATATTTGACATTAAAATTTGATAAGACAATTGATTACCAACTTTAATATTAACATTTAACTCTTGTAATAATTTTTCCATATTTATCCTTTATTTTTAGTTGCTAAAATATCACGTTCTGAAAGAATAGGAGAATTTGTTGGCCAATCTATACCGATTCTTTCATCATTCCATGCATAAGTAAATTGATCAGGCGCATCCACATAATCTCCTTTATAAGCACATTTATAGTAATAAACTGCACTTTCACTAGTAACATAATGAGCATTTCCAAAACCTGCTGGCACTAAGATGATTTGCTGATTATCTTGATTTATGATGAATTTTTCATACTTTAAATAGGTTGGCGAATCTTTTCTGCAATCTACCACCACCTGATGAATTTCCCCATAAACACAAGTTGCAAGCTTATAAGTTTTTACATCGCCATGGATACCGCGAATAACATTGTGTTTTGAGTGTATAAATTTATCGTGTATAAATTTTAATCCATTTGGTAAAAGCTTATCTACAGCCTTGCTTGTAAAAGCTGTCCAAATTTCACCTCTTAAATCTCTAAATTTATTAGGAGTTATGATATACACTCCCTTTAAAATTTTTGATTCTTGTATATTAAATTCTATTGCCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP005388|1355179:1362074|1361528_1362074_-|WP_002860364.1|DBSCAN-SWA
MAIEFNIQESKILKGVYIITPNKFRDLRGEIWTAFTSKAVDKLLPNGLKFIHDKFIHSKHNVIRGIHGDVKTYKLATCVYGEIHQVVVDCRKDSPTYLKYEKFIINQDNQQIILVPAGFGNAHYVTSESAVYYYKCAYKGDYVDAPDQFTYAWNDERIGIDWPTNSPILSERDILATKNKG
>NZ_CP005388|1355179:1362074|1356434_1357454_-|WP_002860370.1|DBSCAN-SWA
MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIEREDGKIIFDSPDTNSYSEYESKEFLGNDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYDNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKMKEALFKADFDTLAQILGKSWQSKKIISEIVSNDELERIYHLAMQNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALSKEQGYVQDFSFTKEGVKSWRI
>NZ_CP005388|1355179:1362074|1358490_1359525_-|WP_032592416.1|DBSCAN-SWA
MKKTALITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKDGYDPVVHICSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIEAGYQEPVIKVGNLSSVRTFQDCRDAIRAYYLLSLESEKGKVPCGEAFNIAGEEAFKLPEVIDILLNFSDMGGGIEVRQVEDRMRPIDADYQMFDNGKIKSFIDWKAEIPVRQMLKDLLNHWRNEIKRGRIPLNR
>NZ_CP005388|1355179:1362074|1357528_1358467_-|WP_002860369.1|DBSCAN-SWA
MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLSCSHNKNFTFINGDAMDENLIRQEVAKADIIIPLAALVGAPLCKRNPKLAKMINYEAVKMISDFASPSQIFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGNCVTFRLATVFGISPRMRLDLLVNDFTYRAYKDKFIVLFEEHFRRNYIHVRDVVKGFIHGIENYDKMKGQAYNMGLSSANLTKRQLAETIKKYVPDFYIHSASIGEDPDKRDYLVSNAKLEATGWKPDNTLEDGIEELLRAFKMMKVNRFANV
>NZ_CP005388|1355179:1362074|1355179_1355854_-|WP_002869406.1|DBSCAN-SWA
MQAIILCGGLGTRLKSVIKDIPKPMAPINDKPFLEFIFEYLKKQGIKEVILAVSYKYEVIKEYFKDEFLGIKIKYSIEKEPLGTGGAIKEALKIIKNETYVLNGDTFFGIDLSKLKLNGSKICLALKQMNDFDRYGTVNVNEQGFVISFEEKIFKNQGLINGGIYLLTKDIFNEFDLEKKFSFEEFLRENYEKLKAKAHIFDDYFIDIGVPEDYYNFTTNQSHF
>NZ_CP005388|1355179:1362074|1355841_1356447_-|WP_002860371.1|DBSCAN-SWA
MENLNSYIKEHFQESILVKEQILKDENLITLIKNASLEVIKAYKNGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYENLFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGANGGAMNELCDYCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ
>NZ_CP005388|1355179:1362074|1359533_1360592_-|WP_032592414.1|DBSCAN-SWA
MQKDSKIYIAGHSGLVGSAILNELKQQGYKNLVFKTHFELDLTNQKAVADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHKVKKLLFIASTTVYPKNATLPTSEEQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKRYEDLLNDLKFDSIEEAKNYLKKFGVDKDNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKSDNTEIINTHLNIGPHKNITIKELAELIKNIVGFKGKLVFNLNRPDGAMQKFTDCSKIHSLGWKHKIELEDGIKMMYEWYLKEQNIRQ

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002869406.1|1355179_1355854_-	nucleotidyltransferase family protein	A0A2K9L821	Tupanvirus	6.0e-07	26.1
WP_002860371.1|1355841_1356447_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	3.7e-16	35.0
WP_002860370.1|1356434_1357454_-	D-glycero-D-manno-heptose 7-phosphate kinase	A0A222YW25	Synechococcus_phage	7.1e-60	40.5
WP_002860369.1|1357528_1358467_-	NAD-dependent epimerase/dehydratase	A0A0F7LC08	uncultured_marine_virus	1.4e-73	45.9
WP_032592416.1|1358490_1359525_-	GDP-mannose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	4.0e-143	72.5
WP_032592414.1|1359533_1360592_-	GDP-L-fucose synthase	M1HWW2	Paramecium_bursaria_Chlorella_virus	1.9e-79	43.8
WP_002860364.1|1361528_1362074_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	A0A1D7XFA9	Escherichia_phage	1.7e-15	29.6