CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NC_015222	Nitrosomonas sp. AL212, complete sequence	3 crisprs	cas1,csa3,cas2,cas4,cas7,cas8c,cas5,cas3,PD-DExK,DinG,DEDDh,cas9	1	15	12
NC_015221	Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequence	0 crisprs	NA	0	0	0
NC_015223	Nitrosomonas sp. AL212 plasmid pNAL21201, complete sequence	0 crisprs	csa3	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_015222_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015222_1

1342573-1342655

Unclear

Consensus_repeat	Method
ATAAGTCTCGGTTAAGGGGCCAA	CRISPRCasFinder

1 spacers

cas1

The CRISPR arrays of NC_015222_1

>merge|NC_015222|1|1342573-1342655|CRISPRCasFinder
ATAAGTCTCGGTTAAGGGGCCAATGTCTTCATCTTTAATCTCATCTGGAGGGCCATATTTATAAGTCTCGGTTAAGGGGTCAA

>NC_015222|1|1|1342573-1342655|CRISPRCasFinder
ATAAGTCTCGGTTAAGGGGCCAA	TGTCTTCATCTTTAATCTCATCTGGAGGGCCATATTT
ATAAGTCTCGGTTAAGGGGTCAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_015222.1\|WP_013647353.1\|1348485_1348845_+\|DUF4202-domain-containing-protein	unknown	unknown	gnl\|CDD\|379397
NC_015222.1\|WP_013646989.1\|1349950_1351105_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NC_015222.1\|WP_041362225.1\|1345802_1346888_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NC_015222.1\|WP_013646289.1\|1338548_1340132_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NC_015222.1\|WP_013647346.1\|1335350_1335572_+\|hypothetical-protein	unknown	unknown	unknown
NC_015222.1\|WP_013647347.1\|1335963_1337736_+\|hypothetical-protein	unknown	unknown	unknown
NC_015222.1\|WP_041362844.1\|1341116_1342553_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NC_015222.1\|WP_013647354.1\|1348944_1349844_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NC_015222.1\|WP_083810528.1\|1353924_1354212_+\|DUF4202-family-protein	unknown	unknown	gnl\|CDD\|379397
NC_015222.1\|WP_190274746.1\|1347128_1347407_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372296
NC_015222.1\|WP_150102770.1\|1347343_1347592_+\|CRISPR-associated-endonuclease-Cas1	unknown	unknown	gnl\|CDD\|376633
NC_015222.1\|WP_013647348.1\|1337864_1338155_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236861
NC_015222.1\|WP_013647344.1\|1332758_1333622_+\|nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|378409
NC_015222.1\|WP_013647356.1\|1354318_1356007_-\|multicopper-oxidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|259922
NC_015222.1\|WP_013646288.1\|1340185_1340536_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NC_015222.1\|WP_041362233.1\|1347595_1347994_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_015222.1\|WP_041362237.1\|1352327_1353836_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NC_015222.1\|WP_013646287.1\|1340523_1340820_-\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	unknown
NC_015222.1\|WP_013647343.1\|1330380_1331814_-\|M10-family-metallopeptidase	unknown	unknown	gnl\|CDD\|369942
NC_015222.1\|WP_013647345.1\|1334132_1335182_-\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718

Protein	Function_ID	Function_description	E-value
NC_015222.1\|WP_013647353.1\|1348485_1348845_+\|DUF4202-domain-containing-protein	gnl\|CDD\|379397	pfam13875, DUF4202, Domain of unknown function (DUF4202). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 187 and 205 amino acids in length. There are two conserved sequence motifs: LED and KMS. The function of these proteins is unknown, although many are incorrectly annotated as glutamyl tRNA synthetases.	1.27785e-54
NC_015222.1\|WP_013646989.1\|1349950_1351105_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.40528e-104
NC_015222.1\|WP_041362225.1\|1345802_1346888_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	9.43405e-54
NC_015222.1\|WP_013646289.1\|1338548_1340132_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	2.81766e-111
NC_015222.1\|WP_041362844.1\|1341116_1342553_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	7.08418e-57
NC_015222.1\|WP_013647354.1\|1348944_1349844_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	5.50553e-118
NC_015222.1\|WP_083810528.1\|1353924_1354212_+\|DUF4202-family-protein	gnl\|CDD\|379397	pfam13875, DUF4202, Domain of unknown function (DUF4202). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 187 and 205 amino acids in length. There are two conserved sequence motifs: LED and KMS. The function of these proteins is unknown, although many are incorrectly annotated as glutamyl tRNA synthetases.	2.30447e-31
NC_015222.1\|WP_190274746.1\|1347128_1347407_+\|hypothetical-protein	gnl\|CDD\|372296	pfam12760, Zn_Tnp_IS1595, Transposase zinc-ribbon domain. This zinc binding domain is found in a range of transposase proteins such as ISSPO8, ISSOD11, ISRSSP2 etc. It is likely a zinc-binding beta ribbon domain that could bind the DNA.	0.00184033
NC_015222.1\|WP_150102770.1\|1347343_1347592_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.21792e-05
NC_015222.1\|WP_013647348.1\|1337864_1338155_+\|hypothetical-protein	gnl\|CDD\|236861	PRK11147, PRK11147, ABC transporter ATPase component; Reviewed.	0.00305913
NC_015222.1\|WP_013647344.1\|1332758_1333622_+\|nucleotide-binding-protein	gnl\|CDD\|378409	pfam10137, TIR-like, Predicted nucleotide-binding protein containing TIR-like domain. Members of this family of bacterial nucleotide-binding proteins contain a TIR-like domain. Their exact function has not, as yet, been defined.	2.80065e-30
NC_015222.1\|WP_013647356.1\|1354318_1356007_-\|multicopper-oxidase-domain-containing-protein	gnl\|CDD\|259922	cd13853, CuRO_1_Tth-MCO_like, The first cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus Thermophilus. The subfamily of bacterial laccases includes Tth-MCO and similar proteins. Tth-MCO is a hyperthermophilic multicopper oxidase (MCO) from thermus thermophilus HB27. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.	3.85958e-63
NC_015222.1\|WP_013646288.1\|1340185_1340536_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	1.73963e-50
NC_015222.1\|WP_041362237.1\|1352327_1353836_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.4155e-20
NC_015222.1\|WP_041362233.1\|1347595_1347994_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.15583e-28
NC_015222.1\|WP_013647343.1\|1330380_1331814_-\|M10-family-metallopeptidase	gnl\|CDD\|369942	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal. Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.	3.4351e-34
NC_015222.1\|WP_013647345.1\|1334132_1335182_-\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	3.60232e-30

>NC_015222.1|WP_041362844.1|1341116_1342553_-|efflux-transporter-outer-membrane-subunit
MRSKTKIFQIIASSALVLTLQACIPDSLIKKEDTHLPTVFKEGVSDEDNAANIKWEDFFSDPNLVSLLDIAVENNKEINIMMQRINIARNEIQARRGQYLPFVGIGGSAGKERVGEFTRFGAVEENLPVREGRHFPRYVGDYHFGLFSTWEIDIWKKLRNAKQVAVFEYMASEEGKNFLVTNLVAEIAHSYYELLSLDNQLNNLELNISIQQNALKMVRRLQEYARASTLAIKRYEAEVAKNKSKLYQINQSITVVENRINFLLGRTPQPIQRASGSFMEFKPFMLKTGIPSQLLQNRPDIRQAELELSAAALNIEVARAEFYPSFGIRAGIGFEAFAVKYLINTPESLAAMIAGDLVAPLVNRNAIEAEYKNANSRQIQAAYEYEQRIIRAYTEVANQVSNINNLDKSYQLKSEQVEALSKSIDIANNLFKSARTDYLDVLLAQRETLDAKADLIEMKQKQIDAMVDLYRSLGGGWQ
>NC_015222.1|WP_013646287.1|1340523_1340820_-|IS66-family-insertion-sequence-hypothetical-protein
MTSRERQGGHIKAWEASGLSQAAYCRDHGLNSKTFGNWLRTYRDVQKHNQPISLIPAKITPVASVSGYLKLRCSGGHTLELSTNVSPQWLGELLKCLD
>NC_015222.1|WP_013646288.1|1340185_1340536_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MSGLIAPVGQIWMVVEPVDMRRGIDGLSLIVQQTLGHSPCAGSAFVFCNRTRNRMKVLLWDGTGVWLCHRRLHQGRFVWPKLEEGCFELTQSYWEWLIAGVDWQRLSALPPAHLQA
>NC_015222.1|WP_013646289.1|1338548_1340132_-|IS66-family-transposase
MTTMKPLAQLDQLNLDAHTKQQVTGIVQALLDQAQQAIRVQELKIQALTMELAHLRRIQFGKKNESLSSQPNLFEESVLADIAAVHAEIEQIDVTVKTNAPKSPRVRAGRQPLPDHLPRIEHRHEPESCQCGQCGNKLVKIGEDVTEQLDVEPARFFVHRHIRPQYACKSCETITAEPVPPAIIDSGMAAPGLLAWVITSKYLNHLPLYRLEQIAAREQVTLSRSTLAEWVGRIGVALQPLTEQLKWHLLQGNTLHADETPVTQLEPGNGKTQRAYLWAYRSNDLDPGPRIVVFDYQISRSGQHARNFLQNWQGHLLVDDYGGYKALFSRAALSCTELACWAHARRKFFDLHQANGSSMAFEALQRIANLYAIEKESKHLNIELRQQLRAEKSLPVLDELHDWLRQTRMQTAHGGASAKALDYALKRWPSLVRYAHTGYLPIDNNPVENSIRPIAIGKKNWLFTGSQRAGQRAANIQTLLGTAQLNGLNPGAWLNDILTKLPTWPNSRIDELLPFAPEFIQSLKLKQ
>NC_015222.1|WP_013647348.1|1337864_1338155_+|hypothetical-protein
MADKSIPQRLQEELTNLQSVVDEVKLQMHLGSKEIQDKLQPHLEELEQELSQAKEKWEAFESSSESAWEDIQTGLRKSFKSMEQAFERAKKHFPPK
>NC_015222.1|WP_013647347.1|1335963_1337736_+|hypothetical-protein
MNFLRLNFWMICLWAWFHIPLVSANDIACEQTGAVRIWISPLSPQAGQPVKIMVVSTDGPLSELILMDSRDQPTPLQIRQRGGPPWSLIANLENLDRGLYRIIATRNSQQAGCRSMVIGEAAVQEKLETWNLATEAFYSAWIEELFGAPPEENFSFNSLEPVLRNNDRNFLHNYLGLNEDSNLPLTPDCADLPYTLRAYFAWKIGLPMAFRACGRGSAKAPPSCGTPTIVNEFTRGVQSQTNFRKRYRQLVDTVHSGSVRTGLTADNTDWYPIPLSRETLWPGTVYADPYGHILVVAEWVPQTADRPGMLLAVDAQPDNSVARKCVWEGTMLFANTENAGPGFKAFRPVVLPASGTGRMLSNQELNDHPDFMPFSLEQDYLTPDDFYARLTQLINPHGLDPLQAYEAMLTALVEQVETRVNSVQNGEMYFHKNPRSTIAMPSGAAIFQTIGPWEDYSTPSRDMRLIIAINVLSGLPEKIMRHPELFVLNGQSPDQAKTMIERHHAKRAQERSIRYIRSDGSEWELTIAEVLARRPDFEIAYNPNDCAEIRWGAQSNTEEYATCRRQAPAEQRARMAQYRVWFRETRRPVP
>NC_015222.1|WP_013647346.1|1335350_1335572_+|hypothetical-protein
MHEVRNGISETSPVLGLGKKKTNLISGWSFLLDGEQLIFILERLSPEAPERGKIFDFLGQLNGNTSIITVLDN
>NC_015222.1|WP_013647345.1|1334132_1335182_-|Fic-family-protein
MLRTDTLQITPEILSLIARIDEFKGAWRALGTLAPDRLSGLRRVATIESIGSSTRIEGSKLSDREVEQLLSHLEIESFATRDEQEVAGYAELMDLVFSSWHDIPFTENHIKQLHQILLRYSEKDTWHRGNYKTNSNSVAAFDETGAQMGIVFQTASPFDTPRLMTELTTWVNQERETARLHPLLIIALCIVVFLEIHPFQDGNGRLSHVLTTLLLLQTGYIYVPYSSLESVVEQSKEAYYLALRQTQGTIRTNSPNWQPWLMFFLRALAEQLRRLEKKVEREKIVLAAMPELQLQIVEFTREHGRVTIGEAIKLTGASRNTLKQHFRALVELGTLRQHGSGRGVWYDLR
>NC_015222.1|WP_013647344.1|1332758_1333622_+|nucleotide-binding-protein
MKKKPRIFIASSTESLKTAEALNVNLDRSAETVIWSESKLLQNYVDRLLELTRSVDYAAFIFTPDDLIIMRGHEKSAIRDNVLFELGLFMGSLGKERCFIIHPRNSDHHIPSDLLGLTSLDYEINRTDNDLIASTKAVSTTMATVMDRMGFFHKVSKKSETANSNFQLIDYYPKKDQKISTVDLKKIFLKFNKPVDRSTVLHIANYYIQQNMFAQWNVFGWIQFAEDDTKLIWHIHEHVLNDKNAHGPLDINYPRFEIHIGREPKEWRLKDSEGDSLPHTILPVTIL
>NC_015222.1|WP_013647343.1|1330380_1331814_-|M10-family-metallopeptidase
MAFSDPIASPLANNTYINDLLWGSHWNDPIAGTRLKVYIAGQGENEVFDFGGRAVTAHTVPQEITAFQKSIQFIENICNIDFMIANSQADADIIVGVVGNSDAGGSLGTSVPPGEDVGPVVNRQGAVILNRDAYYSTDYSSLQPGGYDFTTFIHELGHAVGLKHPHDSGGDGRPNFPGVTAPFGDYGDFNLNQGLYTMMSYNDGWPAGPNGPLDPVSISGYGYEGTPMAFDIAALQFLYGSNTNFQTGNNVYTLGSTNASGTFYSAIWDTKGIDTIRNPSAIDSTIDLRGATLLHAAGGGGYLSSVDGINGGFTIANGVTVENAIGGSGADTIIGNRVANTLTGNAGNDRINGLGGADTIIGGAGADMLAGGGGADDFTYVAVNDSSGQPDIIKDFVHALDDIDVAAIDANGADAGNPAFIFRGNAAFTGAGAEVRFVKNATHNVTNVLFDIDGNKIADMTIRLTGLITLDAGDFIL
>NC_015222.1|WP_041362225.1|1345802_1346888_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MITKLSVVLSLIAALFLNGCNKETETHHELPKFEATTPFRKDVSLPWPYVGLIKAIMHIELRALEKGYLESIFVDEGQWIKAGQPMFKIMPKVYEAEYQKAKAEAQSANIEYLNTKGLADENIVSPNELALAKAKLDKAHARVRLTQTRLGFTDIRAPFDGIMGPFYARIGSLLDEGELLTKLSDIRQLWVYFNVPEADYLNFKMEEGDKIGETVQLKMANGKIYDHKGIIETIIGDFDSNFGTIQFRALFPNPDKLLRHEETGTILLTKHYPNALIIPQKAVFEIMDKNYVYVINEEEKLEQRLIHIAAEMTKLFLIKDGLNESDRVLLEGIRRVSPGDKVSINLRPPEEIVPELELYTE
>NC_015222.1|WP_190274746.1|1347128_1347407_+|hypothetical-protein
MQFTNLSIDVVRGYGALSYGHDGFMDMFPDEVACLEHLSLVRWPDGYVCQPLRLSGCVEDEQQFVPLPGLPLCVIYQQQLFSGVRISVLRYM
>NC_015222.1|WP_150102770.1|1347343_1347592_+|CRISPR-associated-endonuclease-Cas1
MRNLSTAAIQWCSDQRIALYVMDRDANLTALTHPVIPHTISLRRLQYSVDSIAIAKEILFRKFDACIKSKPMLKMSFTKAGD
>NC_015222.1|WP_041362233.1|1347595_1347994_+|CRISPR-associated-endonuclease-Cas1
MHAKTLEELQLIEARAAIIYWSTWNNCVIKWKEKDKPIEWRSFTQCASGISGKGYKTTHPVNAIVNYAYAILAGQVERALQIAGLNVAVGSLHADQDGRASLVYDLMEPLRPVADKIIFAWVTSQRWRRADF
>NC_015222.1|WP_013647353.1|1348485_1348845_+|DUF4202-domain-containing-protein
MNRQCFDKAKALIDAANCEDPNREISEGKDWPKELLYSRRMSEMLERYAPDADDVMKLAVSAQHIQRWKSPRSDYPMDRKGYHQWRAELNKFHADTVADLLAKAGYENTFIARIMLIPV
>NC_015222.1|WP_013647354.1|1348944_1349844_-|IS3-family-transposase
MVTFIDSNKAKYGIEPICRQIQIVPSSYYEHKRYERDPNRLPDRIRRDMKLELEIQRVWENNFRVYGARKIWRQLIREGTRVARCTVERLMKKLGIQGIKRGKKCWTTISDDSLYRPADKVNRQFTAIRPNQLWVADITFVATWTGFVYVAFIIDVFARCIVGWRVSRSLHTDLVLDALEQALWARREIKGLIHHSDHGTQYLSIRYTERLTEANIEASVGSIGDSYDNALAETINGLYKTEVIRHRGPWRSIEEVEFATLEWVDWFNNRRLLEPIGNIPPAEFEMAYYRQLEESADAV
>NC_015222.1|WP_013646989.1|1349950_1351105_+|IS30-family-transposase
MNHQPSKRSFTYHQQETMWQLWSQGKSLSEIGRQLNKHAGSVFCYLQKSGGIKPSPSKRSARDLSLLEREEISRGLSANLSFRAIARNLNRASSTVSREINRNGGLSKYRAVSADRRAWMKAKRPKTCKLNDDANLRAIVSDKLASKWSPEQVAGWLKQTYPKASAMHISHETIYKTLFIQSRGALKKELLRQLRTQRVMRQSKHFNTKGNARGGIIDAVSIHDRPQEVNDRIIPGHWEGDLICGTQKSYIATLVERSSRYTLLVKLTGNDTHAVVSAITQKVIELPQQLKKSLTWDRGMELAQHKLFTIDTDIKVYFCDPKSPWQKGTNENTNKLLRQYMPKKTDLSVYSQEQLDMMAEELNDRPRKTLNFLSPSQKISAVLQ
>NC_015222.1|WP_041362237.1|1352327_1353836_-|IS21-family-transposase
MITMVMYAKIRRMYYREHLSINEIQRRTSLSRNTIKKWLKAPNDSAVKYQRAKKPGKLTLFESRLLLALEADARRPKKDRRTALMLFKEILSEGYTGGYSIVCDFIREWRNQGSQSKSVYVPLRFTLGEAFQFDWSEEWLVIGGIHRKVLAAHTKLCASRAFMLSGYPSQSHEMLFEAHTRAFTAFGGVSRRGIYDNMKTAVDKVSKGNGRIVNTRFFAMTAHYLFDPDFCNVASGWEKGVVEKNVQDMRRRLWNEAKQQQFSSFDDLNRWLETRCRALWSEIQHPDYAGITLADALEQEQLYLMPMPAPFDGYIEVLARVSSTCLVTLQRNRYSVPCRLANQMVAVHQYADRIEIVHNNAIAACHTRLLDSDQVSYDWQHYIPVIEKKPGALRNGAPFAELPVPLLQLQTALRRRERQQADRIMAKVLSLVPTHELEAVLVAVELVLESGVPSAEHVSNVLARLKHTDVPASVETTLKLNEEPQADTARYDRLNKQEVPHV
>NC_015222.1|WP_083810528.1|1353924_1354212_+|DUF4202-family-protein
MSIGVNTRITQAVGKKSLKTNPDTQLLEDVAGLVFLEHYLLDFAGRHPEYDEQKWLDIIRRIWNKMSAQAHQFVLAGHIKLPDSLAALIKQAVSE
>NC_015222.1|WP_013647356.1|1354318_1356007_-|multicopper-oxidase-domain-containing-protein
MQILSKKYLQNLLIVSTLLLGSSFASAGKNHPSCAYEPIDIEKYGKQPFQNPPDRHAQNGRLETVLTVQYTDPKTTSIAGCGVKLRTYEGKLVGPTLRVKQGDIVNLLLKNGLPKESPNEIQAQFDQENQNAYLDTIPASFNTTNVHFHGLHVSPTGNSDNVLLAISPQSNFPYEVTLPKDHPIGSYWYHAHAHGSTSIQVGSGMAGAIVIEDNPSTTPKALLAANANEKIFVLQTILYNQKGELNHITSLFPGPSTPNPKDCNTATNKDTWPCSQRRITINGQIVPIITMKRGEVQRWRLIDTAFRESIAFAVEKHDLHEIALDGNYLGRIDTWKAGTPIDLQPGYRSDVLIKASMKPGEYRIIDQPTSRLKSLRQADEPENLLAILKVVDETNDMALPTNEEMAPLAPFGNLDLSKQAVGVQEVAFKLGQDMPGKKNYFQVNYRAFNPDHVRQLELGAVDMWSLTTVGDPAAVPGAIPPLPHVFHIHVNPFQWQRIGPDGKPQMVWKDTLLVQGPAVTNVYTHYQTYTGKFVMHCHILDHEDLGMMEIEEVINTPVAHSH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_015222_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015222_2

1386182-1388367

TypeI

I-C

Consensus_repeat	Method
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	PILER-CR
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CRISPRCasFinder
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CRT

33 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NC_015222_2

>merge|NC_015222|2|1386182-1388367|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCACGCGCCCACGCGGGGCGCGACACTGCCAAATAAAACATTATACAAGTAAACAACGTTTCAATCCACGCGCCCACGCGGGGCGCGACCCGCTGGTTCCGTTATCGCTTGCGCTTCCTGTAGTTTCAATCCACGCGCCCACGCGGGGCGCGACCTCGCCTGGTACTGAGATAATACCAGGCGCGTGGTTTCAATCCACGCGCCCACGCGGGGCGCGACTGCTAATATTTCTTTATGTTCGGATATCTTATCGTTTCAATCCACGCGCCCACGCGGGGCGCGACTTTAAAATTCCCTTATAACATTTCATTATAAGGGTTTCAATCCACGCGCCCACGCGGGGCGCGACTTATACAAGTGAACAATGAGACGCCATAATAAATTGTTTCAATCCACGCGCCCACGCGGGGCGCGACAATTAATTACGCTTGCTTCATCGATAAGTCTATCGTTTCAATCCACGCGCCCACGCGGGGCGCGACCCCCCGGATACCGCAGCTGCATTCATTTGGCTGTTTCAATCCACGCGCCCACGCGGGGCGCGACGACCGGATACTTGTCTTCTGCTGCACAAAGTTCCTGTTTCAATCCACGCGCCCACGCGGGGCGCGACTTTCAAACAAAAATTATTTCCAACTCTTTTCTTGTTTCAATCCACGCGCCCACGCGGGGCGCGACCGACCTGATAAATACATGTTGCAAACTATGCCGGTTTCAATCCACGCGCCCACGCGGGGCGCGACAAAACATTCTAGGATATCGCGCCGCCAGCAAGGTTTCAATCCACGCGCCCACGCGGGGCGCGACTTAAGTCTATCGGATAGTCATGGGGTAACCATGCGGTTTCAATCCACGCGCCCACGCGGGGCGCGACATGGCAACAATGGCCGGTATGATAGCCAGTTTTGTTTCAATCCACGCGCCCACGCGGGGCGCGACGTCAAGGTTATTGTTGAGGATTACAAGCCAAGAGTTTCAATCCACGCGCCCACGCGGGGCGCGACCGGGTCGATTCAAATCCACCGGCTTTTTGCTTTGCGTTTCAATCCACGCGCCCACGCGGGGCGCGACGGTGGATTTGATTCATAACTATGAGGATTATATGTTTCAATCCACGCGCCCACGCGGGGCGCGACGCGGGAATAAAATCATGCCCATCGCTTCGGAACGTTTCAATCCACGCGCCCACGCGGGGCGCGACCCCGCACCATGCCACCCACGCAGCGTTAAGCCGAGTTTCAATCCACGCGCCCACGCGGGGCGCGACCTTTGGCGGTTCCGGTACAGGAGCGTATAACCGTTTCAATCCACGCGCCCACGCGGGGCGCGACCGCCTTTCATTTTGCTTCCTCGTATTTCAAGAGGTTTCAATCCACGCGCCCACGCGGGGCGCGACAGAGCCGAGTATATCTTTACCGGAACGGGTGCGGGTTTCAATCCACGCGCCCACGCGGGGCGCGACCTATTGGTTATCTTGTTTTCACGTTCAGGTGGGTTTCAATCCACGCGCCCACGCGGGGCGCGACGTCCAGCGTGGATATCGCGGTTTTGTTTTAGTGTTTCAATCCACGCGCCCACGCGGGGCGCGACCCGTACCATGTCGAAAGCTTCAAACCCATTTCCCGTTTCAATCCACGCGCCCACGCGGGGCGCGACAGATTATGGACGGTACGGCGCGCGATTTGGGATTGTTTCAATCCACGCGCCCACGCGGGGCGCGACGTAAATAATAAATCTGTTTTCAGATTCCGAAATGTTTCAATCCACGCGCCCACGCGGGGCGCGACTCAAGCAGACAATAGCCAAAGCCGGTGTAACTGGTTTCAATCCACGCGCCCACGCGGGGCGCGACATCGCCGTCTGTACTCCGGTTTCTAAGTGTGTAGTTTCAATCCACGCGCCCACGCGGGGCGCGACTTGCTTGACATCGCCCGTGACCAGATCAAGAACGTTTCAATCCACGCGCCCACGCGGGGCGCGACGTGAAATCGAGGTTCGACTTAATTCCGGTGGAGGTTTCAATCCACGCGCCCACGCGGGGCGCGACAATAGGATTTTCACTTGCCGTATCATAGTACCAGTTTCAATCCACGCGCCCACGCGGGGCGCGACCAGCATCGCCTTTAAACCCCGGTGAACTTGCTAGGTTTCAATCCACGCGCCCACGCGGGGCGCGAC

>NC_015222|2|1|1386182-1388367|PILER-CR
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	ACTGCCAAATAAAACATTATACAAGTAAACAAC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCGCTGGTTCCGTTATCGCTTGCGCTTCCTGTA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CTCGCCTGGTACTGAGATAATACCAGGCGCGTG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TGCTAATATTTCTTTATGTTCGGATATCTTATC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTTAAAATTCCCTTATAACATTTCATTATAAGG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTATACAAGTGAACAATGAGACGCCATAATAAATT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AATTAATTACGCTTGCTTCATCGATAAGTCTATC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCCCCGGATACCGCAGCTGCATTCATTTGGCT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GACCGGATACTTGTCTTCTGCTGCACAAAGTTCCT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTTCAAACAAAAATTATTTCCAACTCTTTTCTT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CGACCTGATAAATACATGTTGCAAACTATGCCG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AAAACATTCTAGGATATCGCGCCGCCAGCAAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTAAGTCTATCGGATAGTCATGGGGTAACCATGCG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	ATGGCAACAATGGCCGGTATGATAGCCAGTTTT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTCAAGGTTATTGTTGAGGATTACAAGCCAAGA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CGGGTCGATTCAAATCCACCGGCTTTTTGCTTTGC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GGTGGATTTGATTCATAACTATGAGGATTATAT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GCGGGAATAAAATCATGCCCATCGCTTCGGAAC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCCGCACCATGCCACCCACGCAGCGTTAAGCCGA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CTTTGGCGGTTCCGGTACAGGAGCGTATAACC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CGCCTTTCATTTTGCTTCCTCGTATTTCAAGAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AGAGCCGAGTATATCTTTACCGGAACGGGTGCGG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CTATTGGTTATCTTGTTTTCACGTTCAGGTGG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTCCAGCGTGGATATCGCGGTTTTGTTTTAGT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCGTACCATGTCGAAAGCTTCAAACCCATTTCCC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AGATTATGGACGGTACGGCGCGCGATTTGGGATT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTAAATAATAAATCTGTTTTCAGATTCCGAAAT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TCAAGCAGACAATAGCCAAAGCCGGTGTAACTG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	ATCGCCGTCTGTACTCCGGTTTCTAAGTGTGTA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTGCTTGACATCGCCCGTGACCAGATCAAGAAC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTGAAATCGAGGTTCGACTTAATTCCGGTGGAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AATAGGATTTTCACTTGCCGTATCATAGTACCA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CAGCATCGCCTTTAAACCCCGGTGAACTTGCTAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC

>NC_015222|2|2|1386182-1388367|CRISPRCasFinder
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	ACTGCCAAATAAAACATTATACAAGTAAACAAC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCGCTGGTTCCGTTATCGCTTGCGCTTCCTGTA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CTCGCCTGGTACTGAGATAATACCAGGCGCGTG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TGCTAATATTTCTTTATGTTCGGATATCTTATC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTTAAAATTCCCTTATAACATTTCATTATAAGG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTATACAAGTGAACAATGAGACGCCATAATAAATT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AATTAATTACGCTTGCTTCATCGATAAGTCTATC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCCCCGGATACCGCAGCTGCATTCATTTGGCT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GACCGGATACTTGTCTTCTGCTGCACAAAGTTCCT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTTCAAACAAAAATTATTTCCAACTCTTTTCTT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CGACCTGATAAATACATGTTGCAAACTATGCCG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AAAACATTCTAGGATATCGCGCCGCCAGCAAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTAAGTCTATCGGATAGTCATGGGGTAACCATGCG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	ATGGCAACAATGGCCGGTATGATAGCCAGTTTT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTCAAGGTTATTGTTGAGGATTACAAGCCAAGA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CGGGTCGATTCAAATCCACCGGCTTTTTGCTTTGC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GGTGGATTTGATTCATAACTATGAGGATTATAT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GCGGGAATAAAATCATGCCCATCGCTTCGGAAC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCCGCACCATGCCACCCACGCAGCGTTAAGCCGA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CTTTGGCGGTTCCGGTACAGGAGCGTATAACC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CGCCTTTCATTTTGCTTCCTCGTATTTCAAGAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AGAGCCGAGTATATCTTTACCGGAACGGGTGCGG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CTATTGGTTATCTTGTTTTCACGTTCAGGTGG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTCCAGCGTGGATATCGCGGTTTTGTTTTAGT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCGTACCATGTCGAAAGCTTCAAACCCATTTCCC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AGATTATGGACGGTACGGCGCGCGATTTGGGATT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTAAATAATAAATCTGTTTTCAGATTCCGAAAT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TCAAGCAGACAATAGCCAAAGCCGGTGTAACTG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	ATCGCCGTCTGTACTCCGGTTTCTAAGTGTGTA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTGCTTGACATCGCCCGTGACCAGATCAAGAAC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTGAAATCGAGGTTCGACTTAATTCCGGTGGAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AATAGGATTTTCACTTGCCGTATCATAGTACCA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CAGCATCGCCTTTAAACCCCGGTGAACTTGCTAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC

>NC_015222|2|1|1386182-1388367|CRT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	ACTGCCAAATAAAACATTATACAAGTAAACAAC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCGCTGGTTCCGTTATCGCTTGCGCTTCCTGTA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CTCGCCTGGTACTGAGATAATACCAGGCGCGTG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TGCTAATATTTCTTTATGTTCGGATATCTTATC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTTAAAATTCCCTTATAACATTTCATTATAAGG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTATACAAGTGAACAATGAGACGCCATAATAAATT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AATTAATTACGCTTGCTTCATCGATAAGTCTATC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCCCCGGATACCGCAGCTGCATTCATTTGGCT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GACCGGATACTTGTCTTCTGCTGCACAAAGTTCCT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTTCAAACAAAAATTATTTCCAACTCTTTTCTT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CGACCTGATAAATACATGTTGCAAACTATGCCG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AAAACATTCTAGGATATCGCGCCGCCAGCAAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTAAGTCTATCGGATAGTCATGGGGTAACCATGCG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	ATGGCAACAATGGCCGGTATGATAGCCAGTTTT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTCAAGGTTATTGTTGAGGATTACAAGCCAAGA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CGGGTCGATTCAAATCCACCGGCTTTTTGCTTTGC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GGTGGATTTGATTCATAACTATGAGGATTATAT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GCGGGAATAAAATCATGCCCATCGCTTCGGAAC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCCGCACCATGCCACCCACGCAGCGTTAAGCCGA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CTTTGGCGGTTCCGGTACAGGAGCGTATAACC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CGCCTTTCATTTTGCTTCCTCGTATTTCAAGAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AGAGCCGAGTATATCTTTACCGGAACGGGTGCGG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CTATTGGTTATCTTGTTTTCACGTTCAGGTGG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTCCAGCGTGGATATCGCGGTTTTGTTTTAGT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CCGTACCATGTCGAAAGCTTCAAACCCATTTCCC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AGATTATGGACGGTACGGCGCGCGATTTGGGATT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTAAATAATAAATCTGTTTTCAGATTCCGAAAT
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TCAAGCAGACAATAGCCAAAGCCGGTGTAACTG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	ATCGCCGTCTGTACTCCGGTTTCTAAGTGTGTA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	TTGCTTGACATCGCCCGTGACCAGATCAAGAAC
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	GTGAAATCGAGGTTCGACTTAATTCCGGTGGAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	AATAGGATTTTCACTTGCCGTATCATAGTACCA
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC	CAGCATCGCCTTTAAACCCCGGTGAACTTGCTAG
GTTTCAATCCACGCGCCCACGCGGGGCGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_015222.1\|WP_013647382.1\|1379506_1379743_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NC_015222.1\|WP_013647380.1\|1378072_1379263_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|224316
NC_015222.1\|WP_013647395.1\|1394152_1396417_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_015222.1\|WP_013647386.1\|1383444_1384794_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NC_015222.1\|WP_013647383.1\|1379800_1380475_-\|DNA-repair-protein-RadC	unknown	unknown	gnl\|CDD\|178801
NC_015222.1\|WP_013647391.1\|1390550_1390727_-\|hypothetical-protein	unknown	unknown	unknown
NC_015222.1\|WP_013647381.1\|1379311_1379467_-\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|179075
NC_015222.1\|WP_013647396.1\|1397535_1401039_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NC_015222.1\|WP_013647387.1\|1384930_1385773_+\|cytochrome-c-biogenesis-protein-CcsA	unknown	unknown	gnl\|CDD\|226621
NC_015222.1\|WP_013647378.1\|1376712_1377174_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|224973
NC_015222.1\|WP_013647379.1\|1377203_1377758_+\|pseudouridine-synthase	unknown	unknown	gnl\|CDD\|211334
NC_015222.1\|WP_013647389.1\|1388847_1389882_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_015222.1\|WP_013647393.1\|1391624_1393451_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NC_015222.1\|WP_041362245.1\|1381887_1382337_+\|dUTP-diphosphatase	unknown	unknown	gnl\|CDD\|234802
NC_015222.1\|WP_013647392.1\|1390737_1391613_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NC_015222.1\|WP_041362248.1\|1388541_1388832_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_015222.1\|WP_013647384.1\|1380674_1381901_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl\|CDD\|235513
NC_015222.1\|WP_013647397.1\|1401101_1402469_+\|tRNA-5-hydroxyuridine-modification-protein-YegQ	unknown	unknown	gnl\|CDD\|237969
NC_015222.1\|WP_013647390.1\|1389884_1390520_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NC_015222.1\|WP_013647394.1\|1393447_1394131_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534

Protein	Function_ID	Function_description	E-value
NC_015222.1\|WP_013647382.1\|1379506_1379743_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.26357e-36
NC_015222.1\|WP_013647380.1\|1378072_1379263_+\|fatty-acid-desaturase	gnl\|CDD\|224316	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism].	4.80481e-93
NC_015222.1\|WP_013647395.1\|1394152_1396417_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	3.74441e-57
NC_015222.1\|WP_013647386.1\|1383444_1384794_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NC_015222.1\|WP_013647383.1\|1379800_1380475_-\|DNA-repair-protein-RadC	gnl\|CDD\|178801	PRK00024, PRK00024, DNA repair protein RadC.	3.24615e-121
NC_015222.1\|WP_013647381.1\|1379311_1379467_-\|50S-ribosomal-protein-L33	gnl\|CDD\|179075	PRK00595, rpmG, 50S ribosomal protein L33; Validated.	1.15883e-19
NC_015222.1\|WP_013647396.1\|1397535_1401039_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NC_015222.1\|WP_013647387.1\|1384930_1385773_+\|cytochrome-c-biogenesis-protein-CcsA	gnl\|CDD\|226621	COG4137, COG4137, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.24279e-57
NC_015222.1\|WP_013647378.1\|1376712_1377174_+\|histidine-phosphatase-family-protein	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	9.57818e-27
NC_015222.1\|WP_013647379.1\|1377203_1377758_+\|pseudouridine-synthase	gnl\|CDD\|211334	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE. This group is comprised of bacterial proteins similar to E. coli RluE. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. Escherichia coli RluE makes psi2457 in 23S RNA. psi2457 is not universally conserved.	2.81441e-84
NC_015222.1\|WP_013647389.1\|1388847_1389882_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	3.77975e-174
NC_015222.1\|WP_013647393.1\|1391624_1393451_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NC_015222.1\|WP_041362245.1\|1381887_1382337_+\|dUTP-diphosphatase	gnl\|CDD\|234802	PRK00601, dut, dUTP diphosphatase.	5.60513e-92
NC_015222.1\|WP_013647392.1\|1390737_1391613_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.11368e-153
NC_015222.1\|WP_041362248.1\|1388541_1388832_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.35197e-30
NC_015222.1\|WP_013647384.1\|1380674_1381901_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl\|CDD\|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	0
NC_015222.1\|WP_013647397.1\|1401101_1402469_+\|tRNA-5-hydroxyuridine-modification-protein-YegQ	gnl\|CDD\|237969	PRK15452, PRK15452, putative protease; Provisional.	0
NC_015222.1\|WP_013647390.1\|1389884_1390520_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.31698e-37
NC_015222.1\|WP_013647394.1\|1393447_1394131_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	2.7203e-120

>NC_015222.1|WP_013647387.1|1384930_1385773_+|cytochrome-c-biogenesis-protein-CcsA
MISILTYLAAFLLYILIGWFFWRNTWGQTASRTNDHVLVKATWGHYAMIVPLLLHALILYQSMFVGSGLSFGLSNAISSIVWLTAFIYWFSGFFKRLEGLQTLVAPIAGVAAIAVLLPLFFPSLRPLENTELPAFKAHLLVAMMAYSLLTIAALHALLMTVVERQLHHPASRSVFPNLPPLLAMEKLLFHIIWVGFILLTLTLMSGIVFSQEVFGQSLTFSHKTLFGFISWGVFAALLIGRQFYGWRGRIAIRWTLIGFIILLLAYIGSKFVLEIILNRY
>NC_015222.1|WP_013647386.1|1383444_1384794_-|signal-recognition-particle-protein
MFDNLTHRLSGVIKTLRGEARLSENNIQDALREVRLALLEADVALPVVKDFIARIKEKAIGHEVMTSLTPGQTLVGVVHQELIAIIGGEKADLNLATVPPAVILMAGLQGAGKTTSSGKLAKWLMENKKKKVLLVSCDIYRPAAIHQLELLANQVGADFFPVQEGQKPGEIGAAALDYARRHHHEVMIVDTAGRLGIDEAMMQEIRELETLLRPIETLFVVDAMQGQDAVNTAKAFSDALPLTGVILTKLDGDARGGAALSVKHITGKPIKFAGTAEKLTGLEAFHPDRMASRILGMGDVLGLIEEAQRSADQQEAEKLMKKMKSGKAFDLDDFKAQFQQMRNMGGMSALMDKLPAQFSQAAQNVKVDDKIINRTEGIINSMTKQERAKPEILKASRKRRIAAGAGVSVQEVNRLLAQFEQARKMMKMMNKGGMAKMMRGIKGMLPRFH
>NC_015222.1|WP_041362245.1|1381887_1382337_+|dUTP-diphosphatase
MKRIDIKVLDDRLNEQFPAYATPGSAGLDLRACIEHPLTINPGETNLIPAGIAIHLADTGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGQILVSCWNRSQTAFFLNPLERIAQLVVVPVIQVAFNRVDSFDYSHRGEDGFGSTGKH
>NC_015222.1|WP_013647384.1|1380674_1381901_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MKIGASTVSKKRLLLGVTGGVAAYKTAELARLLTQHGINVQTIMTEAACRFMGPATFQSVTGNSVYTDLWKTNAAHNMAHIDLSRNADMILVAPASANFIGKLANGLADDLLSVLCIARDCPLMIAPAMNRQMWESPATMRNLSLLRQDEVKIIGPACGEQACGEIGMGRMAEVSELVEAVQIAFQAGTLLQGKNILVTAGPTYEAIDAVRGITNNSSGKMGYAVAKAGLEMGARITLISGPTCLLPPKVDKFISVVSAEEMLHAVQAEVSQADIFISVAAVADYRAASIKQQKLKKSPANLLIELTPNPDILMTISTSPNPPFCVGFAAETENLEKNAAAKRNKKKLPLLVANLAQDAIGSDENELILLDDEGKHVLPKTAKIAQARRLMTHIHLLYDKLKKNDEKN
>NC_015222.1|WP_013647383.1|1379800_1380475_-|DNA-repair-protein-RadC
MAITNWPVSERPREKLLQKGASTLSDTELLAIFLRTGISGKSAVDLARELLLHFGSLTNVFAASQSNFCQLPGMGMAKYAQLQAILEMARRALGEELKCGNAMNSPRLVRDFLRLSLANKQHEVFIGIFLDAKNHAIATEELFSGTLTQASVYPREIIKRALYHNAAAVIFAHNHPSGIAEPSHADKVLTQSLKQALSLVDVQVLDHFIVGNGTALSFSEHDLI
>NC_015222.1|WP_013647382.1|1379506_1379743_-|50S-ribosomal-protein-L28
MARVCEVTGKKPMSGHNVSHANNKTKRRFLPNLQHRKFWVESENRWIKLRLTNAALRTIDKNGIDAVLVKMRLEGKNI
>NC_015222.1|WP_013647381.1|1379311_1379467_-|50S-ribosomal-protein-L33
MREKVKLESSAGTGHFYTTTKNKRAKPEKMEFMKFDPVVRKHVLYKETKLK
>NC_015222.1|WP_013647380.1|1378072_1379263_+|fatty-acid-desaturase
MIYDFLNLISGVVDMPWWGYIVITLIFTHITIAAITIYLHRHSAHRALELHAIPSHFFRFWLWLTTGMVTKEWTAIHRKHHAKCETKEDPHSPVVYGIEKVLAEGSELYRAEAKNAETLKRYGYGTPDDWLERNVYSRHSAKGVALMLIINVILFGPIGITIWAVQMLWAPVFAAGIINGVGHYWGYRNFQAEDASKNIVPWGILIGGEELHNNHHAYATSARLSNKWYEFDIGWMYIRILEMLGLAKVKKVAPKLRIDQAKTQCDSDTLQAVISHRYEVLAKYTKSLKATFAKEMIHLKEATIHYGVDSSTLKRWVLADSKTLQDHEREKLTQVLSNAKTLDKVYTMRDELAQIWQRSTATTEELVKQLEDWCRRAEESGIEVLRVFSQRLRCYA
>NC_015222.1|WP_013647379.1|1377203_1377758_+|pseudouridine-synthase
MPRIILFNKPYGVICQFTPTCGHRSLQDFIPFAGFYPAGRLDADSEGLVLLTDNGKLQDKICSPKYKLSKTYWVQVEGKPDDVALNAMRRGIVLSDFKTKSAQVSLMNEPSFIWDRQPPIRFRKSIPTTWLSLILKEGKNRQIRRMTAAVFFPTLRLIRYAIGLHTLKGIAPGEWRMLAASDIN
>NC_015222.1|WP_013647378.1|1376712_1377174_+|histidine-phosphatase-family-protein
MDLILWRHAEAEEGFPDAARKLTAEGLNQAKCMSDWLKSKLPKNTKVIASPTQRTQQTATALCSDFITEAAVGPGANVHDILTVADWPNFQGAIVIVGHQPTLRNVASYLIPTIPVALSVKKGSVWWIRYQKNKNGFEPVLHTVIYPEMLGIN
>NC_015222.1|WP_041362248.1|1388541_1388832_-|CRISPR-associated-endonuclease-Cas2
MMILVTYDVSFKTDTGPKRLRRIAKLCLNYGQRVQYSVFEIEVDMAQWTKLKNELIDVIDEEFDSLRFYYLGNNWERRVEHIGAKTVLDLNGLILL
>NC_015222.1|WP_013647389.1|1388847_1389882_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRPLRNVIYVQTQNAWLHKDNENLVLKVDKETKARVPIHKLQGLVCFGQVTISPYLMAHCAENGITITFLNMFGKYLARVEGSASGNVLLRRTQHITGHNVEKSVAIAQTMLTGKLYNQRYVIRRYLRDHSEKINDEKILTDLQVAEKRLTRCLTQLIDCKTIDTLMGREGEAAQVYFGVFNHLIRQADFEFDSRRRRPPTDPVNALLSFFYTLLTHDCRSALETTGLDPASGFLHQLRSGRPSLALDIAEEFRPMVDRFVLSLINKRQVVFKDFETWPNGSITLKDEPRKTLLAAWQDRKQDNLFHPWFEETVPIGLLPWLQAQILARFLRGDCDSYVPFLWK
>NC_015222.1|WP_013647390.1|1389884_1390520_-|CRISPR-associated-protein-Cas4
MIRQVALEPIYLSRLQHYLYCPRQFALIELENIWIENQFTAEGQVLHQRVNQADQQKRGAVRTARALRLANAELRIEGVADVVEYHQQADGTEIPFPIEYKRGKPKAHRADEVQLCAQALCLEEMHGVAIPEGALFYGEVRRRHPVIFDADLRNLTLQTILACRDIVQTNITPHAIYQARKCNGCSLIDQCHPKDFGKSASAWLAAQLKKD
>NC_015222.1|WP_013647391.1|1390550_1390727_-|hypothetical-protein
MPTLDLSMLPACIQQALLDLYEFLQQKHANKFVNPVVPASEQQLGQADFIQNLHDEYT
>NC_015222.1|WP_013647392.1|1390737_1391613_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTIQNRYEFVYLFDVSNGNPNGDPDAGNMPRLDPESSKGLVTDVCLKRKIRNFIELTDEQTPGYEIYVKEKSILNLQNIKAYDALEIKHESKKLPKDTKKADEITRWMCEHFFDIRTFGAVMTTEVNCGQVRGPVQLAFAKSIDPIIPLEISITRMAVTTEKESEEQAGGNRTMGRKHIVPYGLYRVHGFISAKLAGKTGFSETDLEKLWQALSLMFEHDRSAARGEMAARKLVVFKHNDALGNVPAHVLFDRVKVERIHGDTDTPASSFSDYKISVDKANITDVIIDEKF
>NC_015222.1|WP_013647393.1|1391624_1393451_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILSSLAQYYQRLADMPDAITGLARVPSYGFSEERISYILVLNRNGQLVDVQSNLSDDKKPKGRYLTVPWSVKRSGQFTEKAFKEGKNNAFFLWDKTAYCLGVESSDKKDLRLSQLTFDAFKKLHLDFLADTEDEGLRAVCLFLKNWSPDQFKSPFFKNEMLDANFVFKLDDDRQYIHERQEAVNVWLKTIAPKNDARKAICLATGKHEPFMNLHPSIKGVYGGQSSGGSIVSFNADAYTSYGKSQGENAPVSEMAAFGYTTALNYLLRRENNQCISIGDTSTVFWAVAGDGQTAQQAESLFAFMLNMPADDGQQIAQIKPVLDKIAKGRPLNEFAPHLDPETRFFVLGLAPNAARLSIRYWLDTTFGQLANHIGEHFQDLSLNPLPWREPPSVWRLLIQTAAQGKSENIPSQLAGELMRAIIAGQSYPRMLLAQLIQRIRSDGDISGIRVAMIKAIIQRDFRKGLIQEEVPMSLDLNITHIAYRLGRLFAAIERIQEAALGRDLNSTVTDKYYGTASTVPFSVFPRLLSGSQNHLTKLRKDKPGYAVNLKKDLAEIIAGIENSFPRHLSVEEQGRFAIGYYHQKQSYFESSKKTDAVADESNESTNN
>NC_015222.1|WP_013647394.1|1393447_1394131_-|type-I-C-CRISPR-associated-protein-Cas5
MAYGIKLHIWGDYACFTRPEMKVERVSYDVITPSAARGILDAIHWKPAIRWVIDKIHVLRPVRFESIRRNEVGSKISANKIKTAMRNQSTQDLYLVADDSKERQQRASTVLRNVAYIIEAHFELTDLASEEDSEGKHLDIFNRRARKGQCFQQPCMGVREFPAYFSLIEPEESLPESELTLEQLNRDLGWMLHDIDFANEMMPRFFKAELKNGVITVPDFYSDEVKA
>NC_015222.1|WP_013647395.1|1394152_1396417_-|CRISPR-associated-helicase/endonuclease-Cas3
MSTQQSNQTVYYAHSGKLEDLSDGQTLLAHLSKVSEMAEQNAHWFGAKELAKYAGLLHDLGKYCPEFQRRLQGGKIRVDHATAGAQVAAARWQLMGKLLAYCIAGHHAGLANGIDEGEQRSNLDVRLKLEPGKDIPHLDPIWQQEIKLPEQLTMPELTYHKIWPGFQLVFFTRMIFSCLVDADRKDTNNYYRRLEGKGNAESNYPPLSALRERFNTKLEKIQQNLATQPPKSINQLRQRILDHSRKQAELRLGLFSLTVPTGGGKTYTSMAFALDHAIAHQLRRIIYVIPFTSIIEQNAKVFREAFDDLADAVVEHHSAFDDTKLPNNDARDTLKLAMESWNAPVIVTTAVQFFESLFGDRPSQCRKLHNIAGSVIILDEAQTLPLKLLRPIMAAISELTLNYQCSIVLCTATQPALKKAEGFINGFEDVHEISPDPLALFTELERVTVKNIGEQTDEQLLTHLQEKEQVLIIVNNRRHARSLYDSMKKLELEGATHLTTLMCAKHRSQILEKVREDLLQGKPCRLVSTSLIEAGVDVDFPCVLRAEAGLDSIAQAAGRCNREGKRERKDSKVLIFQSPDWRAPPELEQLAGNMREVMRNHSRSLLSPGALTSYFNAVYWSKGDELDKKKILETHNNHCRQLSFPFQNIARDFRMIETMLKPVIIEFDDKAERLLRDLEFAENASSIARQLQVYLVQMPEHGFKELLKAGAIKPIKPEKFGDQFWRLTDLDLYDGGAGLSCDNPVFMEAEKTII
>NC_015222.1|WP_013647396.1|1397535_1401039_-|DNA-polymerase-III-subunit-alpha
MPIKPAFIHLRMHSEYSILDSTIRIHDVVKKAVADQMPALALTDLANLFGLVKFYQAAYKNGIKPILGCDIWIANESDRSKPIRLLVLCQTHAGYLLLSRLLSRAYRENQFQNRAEIKESWLQPDDWGTEGLIALSGARLGDIGLSLLQNNILQAEIQVQKWATLFPDRFYLEIQRDGHANEAMLVQHSLALAKKFNLPVVATQAVQFLNVEDYQAHEARVCIAEGYILEDKRRQKNFTQQQYFKTQTEMTQLFADIPAALTNTIEIAKRCNLILELGVNRLPLFPTPNNESLDQYLRSQAELGLIKRMTSLFPDAEMRNDRITQYQSRLEFEVNTIIQMGFAGYFLIVADFINWAKHNNVPVGPGRGSGAGSLVAYSLGITDLDPLRYDLLFERFLNPERISMPDFDIDFCQDRRELVIEYVKQRYGIGKVSQIATFGTMAAKAVIRDIGRVMDLPYNFVDQLAKLIPFEIGMTLKKARQLEPQLNQRAEEEDVRNLLELAESLEGITRNVGMHAGGVLIASSEITDFCPIYCTESGDSVVSQLDKDDVEKIGLVKFDFLGLRTLTILDRAVGYIRQLHPNIDSPESRLFSLETLPLDDDATYALMRKGNAVGIFQFESRGMIDLLQKAKPDHFEDIIALVALYRPGPMDLIPEFIDRKHGRKQIEYLDPRLEPILGPTYGIMIYQEQVMQIAQVIGGYSLGSADLLRRAMGKKKVEEMAQQRDIFVSGAINNGLSEDKATELFGLMEKFAGYGFNKSHAAAYALIAFQTAYLKAHYPAEFMAACLSADMDDTDKVHIFVEDSIANGIIILPPDINLSDYRFIPVDSKNIRFGLGAVKGTGESAVNSIIAVRRQTGPFTDLFDFCNRVDRRIANRRVMESLIRVGAFDIINPNRASLMASVGLAIESAEQTSQSSNQINLFGETSSDAQMQPQLIQAESWHDREKLHQEKIGLGYYFSGHPFDTYASELKHFICTRLDRLNPQREPQLLAGIIHSIRTQMTRRGKMGVINLDDGKARIEVVIFSELFDANRTWLKEDQLLIAEAKISMRAYNGDEEDGLRITAERLYNLAAIRSRFAKQIKIYCNLLTLDQLSGLKKLLIPFSTQTQKSIADFCPITVVYRNDRASGELELGNDWRVHLHEDLLQSLNTHFRTENVEIVYSKNNKS
>NC_015222.1|WP_013647397.1|1401101_1402469_+|tRNA-5-hydroxyuridine-modification-protein-YegQ
MLKSPELLLPAGSLDKMRIAYAFGADAVYAGQPRYSLRARNNDFALEQIKTGIAEAHALGKKFLVASNAMPHNAKIKTYLDDMAPIIAMKPDALIMADPGLIMMVREKWPDVPIHLSVQANTVNYMGVKFWQKIGLTRVILSRELSLDEVAQIRDYCPDMELEVFVHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVKSAEENSSGDIQEVGKIDFDFGQAMQQSEQSSMTNGCGSITRHPAADQVYLIEEKERPGQLMPIMEDEHGTYIMNSKDLRAVEHVERLVKIGVDSLKIEGRTKSLYYVARTAQVYRKAIDDAVARKPFDFALLGELEGLANRGYTSGFYQRHNTHETQNYLRGHSESNRSQYVGDITGFDTASGMAEILVKNRFQVGDRLEIIHPAGNQVVELSHMLDSAGRPVQIAPGSGHRVRIPLAGNVENAFVTRFF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_015222_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015222_3

2937667-2938940

TypeII

Consensus_repeat	Method
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	CRISPRCasFinder
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	CRT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	PILER-CR

19 spacers

cas2,cas1,cas9

The CRISPR arrays of NC_015222_3

>merge|NC_015222|3|2937667-2938940|CRISPRCasFinder,CRT,PILER-CR
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAACGAACTTTAAAACATTTGTGATAAAATTTTGGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACTCCATCTGTTTGCGGTACTCGTAGGCTATAGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACTGATTATGTCTACCATGCTGTCTTCGTGCGCGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACTGAATCCATTGAGCTTGGTGAACATACATACGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACTTCATTGCAAGCAGAGTTTACGCCAATAGGAGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACTGCCCTTCACCTCATTAGAAAATACGTCAGGGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACCTAATGAATTGATATCCGCATTAGAGCGCAGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACGATAGCGACACTGCGAAGATAGCAGCAGCAGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACTTTCAGGTTATGCGGATGCGCATGACGTATGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACTTGTGCTTGAGTTGTTAGATTCTACAAACTGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACTTTTGAGTTCAAGACAATGCTGGTATGTGCGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACCGAAACTTCACCGTTAAATGCTCTGCCAAAGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACTAAGTTTAGACTTGAAGAAACCGTGTTAGTGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACGTCAAGATGTACCGATGAGTCGCTACCTGAGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACTTGAATCCATCGGTACTTTACACTCAATATGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACGAAATAATCAAAGACGATATCGGTCTTGTAGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACAGCCGACTTGGATTTGATGCGGAAATCTCAGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACATCCGACTGGATGAAAACGTCGCCTTTTTTGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACGTTTCAACAATTTACCAATACATTACAAGTGTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC

>NC_015222|3|3|2937667-2938940|CRISPRCasFinder
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GAACTTTAAAACATTTGTGATAAAATTTTG
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TCCATCTGTTTGCGGTACTCGTAGGCTATA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TGATTATGTCTACCATGCTGTCTTCGTGCGC
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TGAATCCATTGAGCTTGGTGAACATACATAC
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTCATTGCAAGCAGAGTTTACGCCAATAGGA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TGCCCTTCACCTCATTAGAAAATACGTCAGG
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	CTAATGAATTGATATCCGCATTAGAGCGCA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GATAGCGACACTGCGAAGATAGCAGCAGCA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTTCAGGTTATGCGGATGCGCATGACGTAT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTGTGCTTGAGTTGTTAGATTCTACAAACT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTTTGAGTTCAAGACAATGCTGGTATGTGC
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	CGAAACTTCACCGTTAAATGCTCTGCCAAA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TAAGTTTAGACTTGAAGAAACCGTGTTAGT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GTCAAGATGTACCGATGAGTCGCTACCTGA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTGAATCCATCGGTACTTTACACTCAATAT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GAAATAATCAAAGACGATATCGGTCTTGTA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	AGCCGACTTGGATTTGATGCGGAAATCTCA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	ATCCGACTGGATGAAAACGTCGCCTTTTTT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GTTTCAACAATTTACCAATACATTACAAGT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC

>NC_015222|3|2|2937667-2938940|CRT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GAACTTTAAAACATTTGTGATAAAATTTTG
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TCCATCTGTTTGCGGTACTCGTAGGCTATA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TGATTATGTCTACCATGCTGTCTTCGTGCGC
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TGAATCCATTGAGCTTGGTGAACATACATAC
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTCATTGCAAGCAGAGTTTACGCCAATAGGA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TGCCCTTCACCTCATTAGAAAATACGTCAGG
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	CTAATGAATTGATATCCGCATTAGAGCGCA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GATAGCGACACTGCGAAGATAGCAGCAGCA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTTCAGGTTATGCGGATGCGCATGACGTAT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTGTGCTTGAGTTGTTAGATTCTACAAACT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTTTGAGTTCAAGACAATGCTGGTATGTGC
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	CGAAACTTCACCGTTAAATGCTCTGCCAAA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TAAGTTTAGACTTGAAGAAACCGTGTTAGT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GTCAAGATGTACCGATGAGTCGCTACCTGA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTGAATCCATCGGTACTTTACACTCAATAT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GAAATAATCAAAGACGATATCGGTCTTGTA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	AGCCGACTTGGATTTGATGCGGAAATCTCA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	ATCCGACTGGATGAAAACGTCGCCTTTTTT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GTTTCAACAATTTACCAATACATTACAAGT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC

>NC_015222|3|2|2938321-2938940|PILER-CR
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTTTGAGTTCAAGACAATGCTGGTATGTGC
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	CGAAACTTCACCGTTAAATGCTCTGCCAAA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TAAGTTTAGACTTGAAGAAACCGTGTTAGT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GTCAAGATGTACCGATGAGTCGCTACCTGA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	TTGAATCCATCGGTACTTTACACTCAATAT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GAAATAATCAAAGACGATATCGGTCTTGTA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	AGCCGACTTGGATTTGATGCGGAAATCTCA
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	ATCCGACTGGATGAAAACGTCGCCTTTTTT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC	GTTTCAACAATTTACCAATACATTACAAGT
GTTCCGGTCAGAGCACAAATCCCAATATGCTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_015222.1\|WP_013648686.1\|2945201_2946608_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143418
NC_015222.1\|WP_013648682.1\|2936248_2936932_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
NC_015222.1\|WP_013646989.1\|2947849_2949004_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NC_015222.1\|WP_013648685.1\|2941805_2944940_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NC_015222.1\|WP_083810582.1\|2939342_2940038_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NC_015222.1\|WP_013648678.1\|2932847_2933282_+\|ribulose-bisphosphate-carboxylase-small-subunit	unknown	unknown	gnl\|CDD\|177052
NC_015222.1\|WP_013648675.1\|2927765_2930147_-\|phosphoenolpyruvate-synthase	unknown	unknown	gnl\|CDD\|235809
NC_015222.1\|WP_013648676.1\|2930196_2931183_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176111
NC_015222.1\|WP_172424117.1\|2939009_2939336_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_015222.1\|WP_013648688.1\|2950441_2951353_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367436
NC_015222.1\|WP_041362490.1\|2931348_2932827_+\|ribulose-bisphosphate-carboxylase-large-subunit	unknown	unknown	gnl\|CDD\|176981
NC_015222.1\|WP_013648674.1\|2926941_2927769_-\|kinase/pyrophosphorylase	unknown	unknown	gnl\|CDD\|235419
NC_015222.1\|WP_013648679.1\|2933429_2934371_+\|CbbX-protein	unknown	unknown	gnl\|CDD\|200217
NC_015222.1\|WP_013648683.1\|2937021_2937249_-\|hypothetical-protein	unknown	unknown	unknown
NC_015222.1\|WP_049782581.1\|2949356_2949716_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373327
NC_015222.1\|WP_013648680.1\|2934405_2934759_+\|hypothetical-protein	unknown	unknown	unknown
NC_015222.1\|WP_013646505.1\|2940132_2941440_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|377531
NC_015222.1\|WP_150102816.1\|2949988_2950285_+\|hypothetical-protein	unknown	unknown	unknown
NC_015222.1\|WP_013648681.1\|2934792_2936025_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NC_015222.1\|WP_013646344.1\|2946890_2947790_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853

Protein	Function_ID	Function_description	E-value
NC_015222.1\|WP_013648682.1\|2936248_2936932_+\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	3.49193e-44
NC_015222.1\|WP_013646989.1\|2947849_2949004_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.40528e-104
NC_015222.1\|WP_013648674.1\|2926941_2927769_-\|kinase/pyrophosphorylase	gnl\|CDD\|235419	PRK05339, PRK05339, pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator.	6.5286e-118
NC_015222.1\|WP_013648685.1\|2941805_2944940_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	5.93613e-78
NC_015222.1\|WP_013648678.1\|2932847_2933282_+\|ribulose-bisphosphate-carboxylase-small-subunit	gnl\|CDD\|177052	CHL00130, rbcS, ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit; Reviewed.	3.33119e-80
NC_015222.1\|WP_013648675.1\|2927765_2930147_-\|phosphoenolpyruvate-synthase	gnl\|CDD\|235809	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated.	0
NC_015222.1\|WP_013648686.1\|2945201_2946608_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143418	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.	0
NC_015222.1\|WP_172424117.1\|2939009_2939336_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.13251e-23
NC_015222.1\|WP_013648688.1\|2950441_2951353_-\|hypothetical-protein	gnl\|CDD\|367436	pfam03285, Paralemmin, Paralemmin.	0.00225424
NC_015222.1\|WP_041362490.1\|2931348_2932827_+\|ribulose-bisphosphate-carboxylase-large-subunit	gnl\|CDD\|176981	CHL00040, rbcL, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit.	0
NC_015222.1\|WP_013648676.1\|2930196_2931183_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176111	cd08419, PBP2_CbbR_RubisCO_like, The C-terminal substrate binding of LysR-type transcriptional regulator (CbbR) of RubisCO operon, which is involved in the carbon dioxide fixation, contains the type 2 periplasmic binding fold. CbbR, a LysR-type transcriptional regulator, is required to activate expression of RubisCO, one of two unique enzymes in the Calvin-Benson-Bassham (CBB) cycle pathway. All plants, cyanobacteria, and many autotrophic bacteria use the CBB cycle to fix carbon dioxide. Thus, this cycle plays an essential role in assimilating CO2 into organic carbon on earth. The key CBB cycle enzyme is ribulose 1,5-bisphosphate carboxylase/oxygenase (RubisCO), which catalyzes the actual CO2 fixation reaction. The CO2 concentration affects the expression of RubisCO genes. It has also shown that NADPH enhances the DNA-binding ability of the CbbR. RubisCO is composed of eight large (CbbL) and eight small subunits (CbbS). The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.43367e-116
NC_015222.1\|WP_083810582.1\|2939342_2940038_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.06203e-68
NC_015222.1\|WP_049782581.1\|2949356_2949716_-\|hypothetical-protein	gnl\|CDD\|373327	pfam14832, Tautomerase_3, Putative oxalocrotonate tautomerase enzyme. 4-oxalocrotonate tautomerase enzyme is involved in the anthranilate synthase pathway.1.	8.30318e-37
NC_015222.1\|WP_013648681.1\|2934792_2936025_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	1.29839e-91
NC_015222.1\|WP_013646505.1\|2940132_2941440_+\|IS5-family-transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	4.2216e-17
NC_015222.1\|WP_013648679.1\|2933429_2934371_+\|CbbX-protein	gnl\|CDD\|200217	TIGR02880, Protein_CbxX_chromosomal, probable Rubsico expression protein CbbX. Proteins in this family are now designated CbbX. Some previously were CfxQ (carbon fixation Q). Its gene is often found immmediately downstream of the Rubisco large and small chain genes, and it is suggested to be necessary for Rubisco expression. CbbX has been shown to be necessary for photoautotrophic growth. This protein belongs to the larger family of pfam00004, ATPase family Associated with various cellular Activities. Within that larger family, members of this family are most closely related to the stage V sporulation protein K, or SpoVK, in endospore-forming bacteria such as Bacillus subtilis.	1.24718e-180
NC_015222.1\|WP_013646344.1\|2946890_2947790_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.12416e-118

>NC_015222.1|WP_013648683.1|2937021_2937249_-|hypothetical-protein
MSGSCLKSGSRGVEHSCAILLAPIGVLDHPLSMQGLGGESTIMVRDLFEANPDSAVLLIGGKRFADIGKEYLGAY
>NC_015222.1|WP_013648682.1|2936248_2936932_+|OmpA-family-protein
MKTLSILIVQALILTLTGCTTMTDTQRGTAQGTAIGAGTGAAIGALIGGKKGAAIGAGSGALLGAGAGYMWSQRMEEQKREMETATAGTGVQVTQTEDNRLKLNIPSDISFDTGRADIKPGFRPILDNFATTLISNEGTAVKIIGHTDSTGSDAINNPLSVNRAASTRDYLVSRGVSIKRIQIDGRGSREPMAENDTPENRAENRRVEIFVTETQPAPEAAPDQSKQ
>NC_015222.1|WP_013648681.1|2934792_2936025_+|class-II-fructose-bisphosphate-aldolase
MPLVDMRDMLQHAYQNNYAIGGFGLVSLDFLEAIITAAECCRSPVIINLSQPLFGQHDFRLILPAVERAAQLAKVPVAIHFDHAKQHESIVQAINLGCNSVMLDVSSEAFTVNIAHTSRATEIAHASGAAIEGMLGFVGGTEGENALNHLGGIIYTSAEEAKVYVNRTKVDFLAVSIGTVHGRQSSRAKLDFKRLKRINDELGIPLVLHGGSGLIEDQYHKLILNGVAKINCYTELSDIAAATIRSNVQTRAKKGYIETMRDVKNNLQEQVSLCMHRWGSAGRAAEVLIQCRTWQPVEQIIAYNVEERYLQHIETFIERSRETLCAIPGVRQVFSGWALTAADQYHLCWRIQFVTTDASKNFQTHAEYLAFIDQLARISEPDKINITFAATAAEPNPRIEEIRISPAQYI
>NC_015222.1|WP_013648680.1|2934405_2934759_+|hypothetical-protein
METLIRPWRIFPKKIDAVCYNRGRLALLRLGHPLRVTLRQHRGLEVILDNAEWLCVDSNDEDRPILAWREFKIHARSNLHRPVGCELWLYHSCAGLIMGSALDDLNTALETLAIDLR
>NC_015222.1|WP_013648679.1|2933429_2934371_+|CbbX-protein
MPKQSKNLISSKDPSIDLDAEFRNTNIQEVLDKLDRELIGLIPVKTRIRETAALLLVDRVRKQLGLSAGAPSLHMCFTGNPGTGKTTVALRMAEILHRLGYVREGHLVSVTRDDLVGQYIGHTAPKTKEVIKKAMGGVLFIDEAYYLYKPENERDYGAESIEILLQTMENNREDLVVILAGYKDRMDKFFHSNPGMRSRIAHHIDFPDYGADELVSIAKLMLEAQNYCFSKAGEEAFGKYIRLRMKSEHFANARSVRNALDRARLRQANRLFSGTKKSLSKNDLITLEAEDILASRVFLEASPDSKPKAKEAD
>NC_015222.1|WP_013648678.1|2932847_2933282_+|ribulose-bisphosphate-carboxylase-small-subunit
MMTNQGNLLTQGQFSFLPPLTDKQISAQLKYALKNGWAIGIEYTDDPHPRNTYWEMFGNPMFDLKDPAGILLEINSCRKTFPNHYIRVTAFNSTRGVESPTMSYIVNRPKKEPGFSLVRQEGAGRSVSYTIHSYATDKPEAERY
>NC_015222.1|WP_041362490.1|2931348_2932827_+|ribulose-bisphosphate-carboxylase-large-subunit
MMASQTMKEGKERYKSGVIPYKKMGYWEPAYVPKDTDVIAMFRITPQPGVDHEEAAAAVAGESSTATWTVVWTDRLTACELYRAKAYKSELVPNTGPGTDNEAQYFAYIAYDIDLFEEGSIANLTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQGPATGIVVERERLDKFGRPLLGATTKPKLGLSGRNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNKASAATGEVKGHYLNVTAGTMEDMYERAEFAKSLGSVIVMIDLVIGYTAIQSMAKWARRNDMILHLHRAGNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRETRTEKSLEHGLFFDQDWASLNKCMPVASGGIHAGQMHQLIDYLGEDVILQFGGGTIGHPQGIQAGAVANRVALEAMIMARNEGRDYVKEGPQILADAAKWCTPLKQALDTWKDITFNYDSTDTADFVPSTTANA
>NC_015222.1|WP_013648676.1|2930196_2931183_-|LysR-family-transcriptional-regulator
MRHSTLRQLEVFEAIARLKSFTRAAEELFLTQPTVSMQVKKLTEEIGLPLFEQVGKKIYLTDAGEELYQTCLGIFDHFSRFEMIASDMKGLKSGKLRLAVVTTAKYFVPRLLGMFCQKYPGIDVALKVTNREHILERLTGNQDDLYILGQVPDAVDAVAEIFLDNQLVVLASADHPLATEKKIPIKRICDEPFIMREPGSGTRIATEFFFSKHNKKLKVRMELGSNEAIKQTVAGRLGIAVLSRHTLALDAQIGQLAILDVEGFPIERHWYFAYSSGKQLSIVAQTFLSYLRQANNLLDNLTCRHVTSGHCPLLENETSIRSGGEASA
>NC_015222.1|WP_013648675.1|2927765_2930147_-|phosphoenolpyruvate-synthase
MTQYIAWFDQLTMKDVNRVGGKNASLGEMISHLAQAGVSVPAGFATTTQAYREFLVANGLVDRINHLLNGLDVDDIHALTTAGRTIRSWVLDAALPAAISQAIAQAYEILVAHDGKCDEVSFAVRSSATAEDLADASFAGQQETLLNVRGLDQIMAAIKIVFASLYNDRAIAYRVHQNFPHDKVYLSAGIQKMVRSDLGASGVMFTLDTESGFRDVVFITSAYGLGETIVQGTVNPDEFYVYKRGLTAGKPAILSRRLGTKAIEMIYGDSTNATDSFTLTRDVEHERRTRFSLSDTQVEALARQAMIIEQHYGRPMDIEWALDGLDEQLYIVQARPETVESRSTTVLDRYKLNGKGVVLTEGRSIGSKIGQGAARLIMGVDQMHKIRPGDVLVTDMTDPDWEPIMKRASAIVTNRGGRTCHAAIVAREMGIPAVVGCGDATGSITDGVDVTVSCAEGDTGFVYEGMLPFEHITSDTGQLPDLPVKMMLNVGNPSHAFSFSRMPNQGVGLARLEFIINNMIGIHPKALLEFDRLPDALKQTIGTRIAGYQNPVDFYVGKLVEGIATLAAAFYPHAVIVRTSDFKSNEYANLVAGNRYEPQEENPMIGFRGASRYVSAAFRDCFELECQALRKVRDEMGLTNIEIMIPFCRTLEEAEQVTLLLASHGLARGENGLQLIMMCEIPSNAVLAEEFLQYFDGFSIGSNDMTQLTLGVDRDSSLVAHVFDERNPAVRKLLKMAIDACHKQGKYIGICGQGPSDYPDFAAWLYEQGISSLSLNPDSVLQTWLDLAKLSQR
>NC_015222.1|WP_013648674.1|2926941_2927769_-|kinase/pyrophosphorylase
MTPQKRTVFYLSDRTGITAETLGHSLLTQFDGITWSTVNVPFLDDIEKARAVLVQINQAAVDDGYRPLVFSTLLKPEILEVIKQANCRMYDFFETFIHSIEEELHQPFIRIAGRSHGQHHLSYFKRIAAVNYVLAHDDGVNPKHYAEADIILIGVSRSGKTPTCLYLGLQYGIAAANYPLTPDDMSVQQIPKILENVRSKLFGLTLTPAQLHFIRQERRPDSEYASLAQCQRELQWQEALFRQFDIPYLDTTRISIEEISAIILNRCGLRRQLYG
>NC_015222.1|WP_172424117.1|2939009_2939336_-|CRISPR-associated-endonuclease-Cas2
MLSGYRLMWVIVMFDLPVVEKAERKAATDFRNTLLDMGFEMSQFSVYMRFCSSQSQIDTYCTQVEKSLPTGGKVNILQFTDKQYERIITFRGKSKQASKKSPEQYELF
>NC_015222.1|WP_083810582.1|2939342_2940038_-|type-II-CRISPR-associated-endonuclease-Cas1
MLKGFSGSTNYQQAKRFDAQLAASQPLKKRLWADIVKSKLQQQSDALEAAGAPFIPLQALVRKVRSGDPDNFEAQGARRYWGLLFGDDFRRDQQSDGVNAMLNYGYTVLRATTARAVVAAGLHPTIGLHHSNESNAMRLVDDLMEPFRPVIDLKVWQLHQHGESQVTPDSKRELVRTLYDDMQTSVGATPLMVCTQKLATSLAQVFMGERNKMDLPLPGLPLDLAASFLED
>NC_015222.1|WP_013646505.1|2940132_2941440_+|IS5-family-transposase
MLRNSSTIHQPNLFGTDLLMQLDPGDPLLKLASAIPWQEFEESFSLHYTAATGAPSKPIRLMVGLLVLKQLENLSDEAVVLQWKRNPYYQAFCGMKEFQRRLPCHSTELVHFRKRIGAEGVERIFRMSVGLHGRAALEDTVHIDTTVQEKNITYPTDSKLAIRIINRLNKIGKAHGISQRRTFVKEVKSLRLAIRHFRHVTKRAKAKRALKRLRTIAGILIRELRRELPQHCLFERYQQDFLLYERVLAQQPKDKNKIYSLHEPQVYCVTKGKDHKQYEYGSKASIASTAQGNLIVGVVSHEQNQHDSHTLPEILRHVEASRGKAVKQAVCDRGYRGKREVDGTRIILPGKALKRDSRYQKDKKRKQCRRRAAIEPIIGHLKSDYRLARNFLKGTIGDRINLLMAACAWNLKQWLLAIFWLFIPWRKLQNFPIFR
>NC_015222.1|WP_013648685.1|2941805_2944940_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MLHKMRYRLALDLGSTSLGWAMVRLNANQQPCAVIKAGVRIFSNGRNPKDGSSLAVTRREARSMRRRRDRLLKRKARMMRTLIEYGFFPANETQRKALENLNPYALRAKGLDEALTPSEFARALFHINQRRGFKSNRKTDKKDSDSGALKTAIKQLHSVLDPQGNDGKPRTVGELLYKRFTDLSKLPKDRTVRARYRQDKIVKDDGKTKIDKYYDLYIDRAMIEQEFDALWKKQSELNPILFTENARADLKDVLLYQRSLKPVKPGRCTFMSEEERAPLALPSTQRFRMYQEVNNLRILREGLKEESLTLQQRDDLINALEKNNRRTFTQIKKLLGVGGSVQFNFEDPKREELKGNTTSAILGKSEHFGEAWFAFNEAKQDAIVLQLIKEENEAKLVRWLQDETGIDEKRAEVIANAGLPEGYGSLCIEALARILPELRRDVVTYDKAVQAAGFEHHSKLNRNEEIPDITFKIESIDRNSGEIKQFHLHKELPYYGEYLQRHVGFGSGKPEDSIEKRYGKIANPTVHIGLNQVRVVVNALIKRYGHPSEIIVEVARDLKQSKDRRDEENKRQAENQKRNERLRKDIADILGISEERVRRDDIEKMILWEELSFDPADRRCPYSGVQVSTVMLLSDEVEVEHILPFSQTLDDSLNNKTVALRQANRIKGNRTPWEAFGTSNISGFDYSGILTRAELMPKAKRYRFAEDGYQRWLKDDAGFLARALNDTRHLSKIAREYMSLICPNTRVIPGQMTAMLRRNFGLNDVLGLNGEKNRNDHRHHAVDACVIAVTDQGLLQRFAAASASARERQLNRLVENMPLPWESYREHVRRAIDGIWVSHRPDHSHEGAMHNDTAYGLRGNGRVSFHKMVEGKREYIEDNLKVIEITDTKAIDRHGLLPTGKPRPYKGYKGDSNYCIEIVRNEKGRWEGEIISTFDAYQLVRKYGIVQLRYPVLSVSGKPLVMRLIRNDFVRLEHEGITRTLRVCKMREDGQVALADVTEANVDARTRTKEICYVFKTGGSLQKAKARRITISPIGELRDPGFKE
>NC_015222.1|WP_013648686.1|2945201_2946608_-|NAD-dependent-succinate-semialdehyde-dehydrogenase
MTYQTINPATGQLVKTYADIPDQDLESALAKAHGVFETDWRHRPIAERSKIVSAAATILRQKSEEYAHHLTFEMGKLINEARAEVALSADILDYYARKAAHYMKPRKLPETSAAELHIEPLGVLLGIEPWNFPYYQIARVAGPQLMVGNVLLLKHAENVPQSALAFARLFEEAGAPTGVYTNIFASIPQISAIIEDPRVRGVTLTGSEHAGVVVAEHAGRNLKRAVLEMGGSDPLIVLEDAPLESTLNSALFGRMFNTGQCCVGSKRIIVVGKERGKEFLDGFIQRMAALKVGDPEDPETTLGPLSSEKTLNTLLHQIARAKQDGGKVVLGGRRIDRPGFYLEPTILTGINQDNAIHAQELFGPVASFQVVENEEAAIRLANATPFGLGASIFTADVGRGRRIATKIDCGMVFINQPVWTAAELPFGGIKRSGFGRELSELGFGAFVNEKLINVAPPDSPPWGPVAVG
>NC_015222.1|WP_013646344.1|2946890_2947790_-|IS3-family-transposase
MVTFIDSNKAKYGIEPICRQIQIVPSSYYEHKRCERDPNRLPDRIRRDMKLELEIQRVWENNFRVYGARKIWRQLIREGTRVARCTVERLMKKLGIQGIKRGKKCWTTISDDSLYRPADKVNRQFTAIRPNQLWVADITFVATWTGFAYVAFIIDVFARCIVGWRVSRSLHTDLVLDALEQALWARREIKGLIHHSDHGTQYLSIRYTERLTEANIEASVGSIGDSYDNALAETINGLYKTEVIRHRGPWRSIEEVEFATLEWVDWFNNRRLLEPIGNIPPAEFEMAYYRQLEESADAV
>NC_015222.1|WP_013646989.1|2947849_2949004_-|IS30-family-transposase
MNHQPSKRSFTYHQQETMWQLWSQGKSLSEIGRQLNKHAGSVFCYLQKSGGIKPSPSKRSARDLSLLEREEISRGLSANLSFRAIARNLNRASSTVSREINRNGGLSKYRAVSADRRAWMKAKRPKTCKLNDDANLRAIVSDKLASKWSPEQVAGWLKQTYPKASAMHISHETIYKTLFIQSRGALKKELLRQLRTQRVMRQSKHFNTKGNARGGIIDAVSIHDRPQEVNDRIIPGHWEGDLICGTQKSYIATLVERSSRYTLLVKLTGNDTHAVVSAITQKVIELPQQLKKSLTWDRGMELAQHKLFTIDTDIKVYFCDPKSPWQKGTNENTNKLLRQYMPKKTDLSVYSQEQLDMMAEELNDRPRKTLNFLSPSQKISAVLQ
>NC_015222.1|WP_049782581.1|2949356_2949716_-|hypothetical-protein
MPLWKIYHPAEAFNVADKRNLSEQITSLYAGIPIPKFYVVILFEALAEGSCFVSGEPHNRFIRFKVDQIARTLPGPVIREWWIRTIDEIIAPFVKDRGYDWEISIDEMNRPGFSGDKMV
>NC_015222.1|WP_150102816.1|2949988_2950285_+|hypothetical-protein
MKLGVVRIGSYSLSQPGISCIEAQPVDSGLPLGSQEDTKSTFGYRIEDAQLCTRSKNKPLSVYQKGQALIKHLAASSEELNPEEIKRGEQLYFLPTNA
>NC_015222.1|WP_013648688.1|2950441_2951353_-|hypothetical-protein
MNYLSQKKWGLKLIICACLSVLMLMTAAQVFAQDTAAQRIKQLENTLQEIQNELNRIKVESSQTTRKVEQIQETSVQTTQKVEQIQQASIPVEKKSFDFNGMSQKRIMLFFRGGYARSDGHRNGVSIESRVAPVGAQEQADRHAWYTGAGFDFQLTKDTWGFIPKTEVDAELMFEYKQYGHGILGNALANEPTQLAGGAYNPRGVTVNQFTLTASPKIKFNHFAEYKIRPWIIPAGLAIHVVSPPTESITVLEPGIMFAGGIEYNIWKDFFIGTDARYQLVAGSLDGTKIGGLTVGGYVGIGF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_015222_3	3.18\|2938811\|30\|NC_015222\|CRISPRCasFinder,CRT,PILER-CR	2938811-2938840	30	NC_015222.1	980-1009	0	1.0

1. spacer 3.18|2938811|30|NC_015222|CRISPRCasFinder,CRT,PILER-CR matches to position: 980-1009, mismatch: 0, identity: 1.0

atccgactggatgaaaacgtcgcctttttt	CRISPR spacer
atccgactggatgaaaacgtcgcctttttt	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_015222_2	2.20\|1387457\|32\|NC_015222\|PILER-CR,CRISPRCasFinder,CRT	1387457-1387488	32	NC_016591	Burkholderia sp. YI23 plasmid byi_2p, complete sequence	315429-315460	5	0.844
NC_015222_2	2.20\|1387457\|32\|NC_015222\|PILER-CR,CRISPRCasFinder,CRT	1387457-1387488	32	CP000617	Burkholderia vietnamiensis G4 plasmid pBVIE01, complete sequence	115540-115571	5	0.844
NC_015222_3	3.10\|2938291\|30\|NC_015222\|CRISPRCasFinder,CRT	2938291-2938320	30	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	1385355-1385384	6	0.8
NC_015222_2	2.19\|1387391\|34\|NC_015222\|PILER-CR,CRISPRCasFinder,CRT	1387391-1387424	34	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	624961-624994	7	0.794
NC_015222_3	3.1\|2937702\|30\|NC_015222\|CRISPRCasFinder,CRT	2937702-2937731	30	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	433326-433355	7	0.767
NC_015222_3	3.7\|2938096\|30\|NC_015222\|CRISPRCasFinder,CRT	2938096-2938125	30	NZ_CP030875	Raoultella sp. X13 plasmid unnamed, complete sequence	2798-2827	7	0.767
NC_015222_3	3.7\|2938096\|30\|NC_015222\|CRISPRCasFinder,CRT	2938096-2938125	30	NZ_CP030069	Klebsiella pneumoniae strain IA565 plasmid pDA11912.4, complete sequence	2008-2037	7	0.767
NC_015222_3	3.7\|2938096\|30\|NC_015222\|CRISPRCasFinder,CRT	2938096-2938125	30	NZ_CP011864	Enterobacter asburiae strain ATCC 35953 plasmid unnamed 1, complete sequence	2734-2763	7	0.767
NC_015222_3	3.16\|2938681\|30\|NC_015222\|CRISPRCasFinder,CRT,PILER-CR	2938681-2938710	30	MH384261	Staphylococcus phage SA137ruMSSAST121PVL, complete genome	13100-13129	7	0.767
NC_015222_3	3.16\|2938681\|30\|NC_015222\|CRISPRCasFinder,CRT,PILER-CR	2938681-2938710	30	MK348510	Staphylococcus phage vB_SauS_fPfSau02, complete genome	39548-39577	7	0.767
NC_015222_3	3.16\|2938681\|30\|NC_015222\|CRISPRCasFinder,CRT,PILER-CR	2938681-2938710	30	AY954956	Bacteriophage 3A, complete genome	36161-36190	7	0.767
NC_015222_3	3.16\|2938681\|30\|NC_015222\|CRISPRCasFinder,CRT,PILER-CR	2938681-2938710	30	NC_007053	Staphylococcus phage 3A, complete genome	36161-36190	7	0.767
NC_015222_2	2.25\|1387780\|34\|NC_015222\|PILER-CR,CRISPRCasFinder,CRT	1387780-1387813	34	NZ_KY978631	Klebsiella pneumoniae strain 447 plasmid p447-IMP, complete sequence	61397-61430	8	0.765
NC_015222_2	2.25\|1387780\|34\|NC_015222\|PILER-CR,CRISPRCasFinder,CRT	1387780-1387813	34	NZ_CP008900	Enterobacter hormaechei subsp. hoffmannii ECNIH3 plasmid pENT-d4a, complete sequence	6435-6468	8	0.765
NC_015222_2	2.25\|1387780\|34\|NC_015222\|PILER-CR,CRISPRCasFinder,CRT	1387780-1387813	34	NZ_CP043384	Enterobacter hormaechei subsp. xiangfangensis strain WCHEX045001 plasmid p1_045001, complete sequence	74664-74697	8	0.765
NC_015222_3	3.1\|2937702\|30\|NC_015222\|CRISPRCasFinder,CRT	2937702-2937731	30	NZ_CP016746	Lactococcus lactis subsp. cremoris strain JM1 plasmid pMPJM1, complete sequence	113119-113148	8	0.733
NC_015222_3	3.1\|2937702\|30\|NC_015222\|CRISPRCasFinder,CRT	2937702-2937731	30	MN694363	Marine virus AFVG_250M224, complete genome	20570-20599	8	0.733
NC_015222_3	3.2\|2937767\|30\|NC_015222\|CRISPRCasFinder,CRT	2937767-2937796	30	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	232857-232886	8	0.733
NC_015222_3	3.2\|2937767\|30\|NC_015222\|CRISPRCasFinder,CRT	2937767-2937796	30	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	220853-220882	8	0.733
NC_015222_3	3.4\|2937898\|31\|NC_015222\|CRISPRCasFinder,CRT	2937898-2937928	31	HM452126	Aeromonas phage phiAS5, complete genome	117758-117788	8	0.742
NC_015222_3	3.7\|2938096\|30\|NC_015222\|CRISPRCasFinder,CRT	2938096-2938125	30	MT820023	Cryophage ML09, complete genome	3967-3996	8	0.733
NC_015222_3	3.7\|2938096\|30\|NC_015222\|CRISPRCasFinder,CRT	2938096-2938125	30	NZ_CP024432	Klebsiella pneumoniae strain DA48896 plasmid p48896_3, complete sequence	42390-42419	8	0.733
NC_015222_2	2.4\|1386409\|33\|NC_015222\|PILER-CR,CRISPRCasFinder,CRT	1386409-1386441	33	LC168164	Tenacibaculum phage pT24 DNA, complete genome	19843-19875	9	0.727
NC_015222_2	2.12\|1386933\|32\|NC_015222\|PILER-CR,CRISPRCasFinder,CRT	1386933-1386964	32	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	90666-90697	9	0.719
NC_015222_2	2.30\|1388107\|33\|NC_015222\|PILER-CR,CRISPRCasFinder,CRT	1388107-1388139	33	MT584811	Sulfitobacter phage phiGT1, complete genome	32145-32177	9	0.727
NC_015222_3	3.17\|2938746\|30\|NC_015222\|CRISPRCasFinder,CRT,PILER-CR	2938746-2938775	30	LC371242	Escherichia phage EcS1 DNA, complete sequence	87555-87584	9	0.7
NC_015222_2	2.26\|1387846\|34\|NC_015222\|PILER-CR,CRISPRCasFinder,CRT	1387846-1387879	34	MK494105	Mycobacterium phage Pinnie, complete genome	6783-6816	10	0.706
NC_015222_3	3.4\|2937898\|31\|NC_015222\|CRISPRCasFinder,CRT	2937898-2937928	31	KX397369	Erwinia phage vB_EamM_Kwan, complete genome	78818-78848	10	0.677
NC_015222_3	3.4\|2937898\|31\|NC_015222\|CRISPRCasFinder,CRT	2937898-2937928	31	NC_048016	Erwinia phage Wellington, complete genome	78298-78328	10	0.677
NC_015222_3	3.18\|2938811\|30\|NC_015222\|CRISPRCasFinder,CRT,PILER-CR	2938811-2938840	30	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	21194-21223	10	0.667

1. spacer 2.20|1387457|32|NC_015222|PILER-CR,CRISPRCasFinder,CRT matches to NC_016591 (Burkholderia sp. YI23 plasmid byi_2p, complete sequence) position: , mismatch: 5, identity: 0.844

ctttggcggttccggtacagga-gcgtataacc	CRISPR spacer
ctttggcggttccggtacagaaggcgtgttcc-	Protospacer
********************.* ****.*  *

2. spacer 2.20|1387457|32|NC_015222|PILER-CR,CRISPRCasFinder,CRT matches to CP000617 (Burkholderia vietnamiensis G4 plasmid pBVIE01, complete sequence) position: , mismatch: 5, identity: 0.844

ctttggcggttccggtacagga-gcgtataacc	CRISPR spacer
ctttggcggttccggtacagaaggcgtgttcc-	Protospacer
********************.* ****.*  *

3. spacer 3.10|2938291|30|NC_015222|CRISPRCasFinder,CRT matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 6, identity: 0.8

ttgtgcttgagttgttagattctacaaact	CRISPR spacer
tagtgcgtaagttgttagattctacggatt	Protospacer
* **** *.****************..*.*

4. spacer 2.19|1387391|34|NC_015222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 7, identity: 0.794

cccgca-ccatgccacccacgcagcgttaagccga	CRISPR spacer
-gcgcagccatgccacccacgcggcgttacgcgcg	Protospacer
  **** ***************.****** **  .

5. spacer 3.1|2937702|30|NC_015222|CRISPRCasFinder,CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gaactttaaaacatttgtgataaaattttg	CRISPR spacer
ggggtgtaaaacatttctgattaaatttta	Protospacer
*.. * ********** **** *******.

6. spacer 3.7|2938096|30|NC_015222|CRISPRCasFinder,CRT matches to NZ_CP030875 (Raoultella sp. X13 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ctaatgaattgatatccgcattagagcgca	CRISPR spacer
ttaatgaattggtttccgcattaggtatca	Protospacer
.**********.* **********.   **

7. spacer 3.7|2938096|30|NC_015222|CRISPRCasFinder,CRT matches to NZ_CP030069 (Klebsiella pneumoniae strain IA565 plasmid pDA11912.4, complete sequence) position: , mismatch: 7, identity: 0.767

ctaatgaattgatatccgcattagagcgca	CRISPR spacer
ttaatgaattggtttccgcattaggtatca	Protospacer
.**********.* **********.   **

8. spacer 3.7|2938096|30|NC_015222|CRISPRCasFinder,CRT matches to NZ_CP011864 (Enterobacter asburiae strain ATCC 35953 plasmid unnamed 1, complete sequence) position: , mismatch: 7, identity: 0.767

ctaatgaattgatatccgcattagagcgca	CRISPR spacer
ttaatgaattggtttccgcattaggtatca	Protospacer
.**********.* **********.   **

9. spacer 3.16|2938681|30|NC_015222|CRISPRCasFinder,CRT,PILER-CR matches to MH384261 (Staphylococcus phage SA137ruMSSAST121PVL, complete genome) position: , mismatch: 7, identity: 0.767

gaaataatcaaagacgatatcggtcttgta	CRISPR spacer
gatgcaatcaaagaagatattggtcttgat	Protospacer
** ..********* *****.*******

10. spacer 3.16|2938681|30|NC_015222|CRISPRCasFinder,CRT,PILER-CR matches to MK348510 (Staphylococcus phage vB_SauS_fPfSau02, complete genome) position: , mismatch: 7, identity: 0.767

gaaataatcaaagacgatatcggtcttgta	CRISPR spacer
gatgcaatcaaagaagatattggtcttgat	Protospacer
** ..********* *****.*******

11. spacer 3.16|2938681|30|NC_015222|CRISPRCasFinder,CRT,PILER-CR matches to AY954956 (Bacteriophage 3A, complete genome) position: , mismatch: 7, identity: 0.767

gaaataatcaaagacgatatcggtcttgta	CRISPR spacer
gatgcaatcaaagaagatattggtcttgat	Protospacer
** ..********* *****.*******

12. spacer 3.16|2938681|30|NC_015222|CRISPRCasFinder,CRT,PILER-CR matches to NC_007053 (Staphylococcus phage 3A, complete genome) position: , mismatch: 7, identity: 0.767

gaaataatcaaagacgatatcggtcttgta	CRISPR spacer
gatgcaatcaaagaagatattggtcttgat	Protospacer
** ..********* *****.*******

13. spacer 2.25|1387780|34|NC_015222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY978631 (Klebsiella pneumoniae strain 447 plasmid p447-IMP, complete sequence) position: , mismatch: 8, identity: 0.765

ccgtaccatgtcgaaagcttcaaacccatttccc	CRISPR spacer
tttttccaggtcgaaagcttcatacccatttcat	Protospacer
.. * *** ************* ********* .

14. spacer 2.25|1387780|34|NC_015222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008900 (Enterobacter hormaechei subsp. hoffmannii ECNIH3 plasmid pENT-d4a, complete sequence) position: , mismatch: 8, identity: 0.765

ccgtaccatgtcgaaagcttcaaacccatttccc	CRISPR spacer
tttttccaggtcgaaagcttcatacccatttctt	Protospacer
.. * *** ************* *********..

15. spacer 2.25|1387780|34|NC_015222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043384 (Enterobacter hormaechei subsp. xiangfangensis strain WCHEX045001 plasmid p1_045001, complete sequence) position: , mismatch: 8, identity: 0.765

ccgtaccatgtcgaaagcttcaaacccatttccc	CRISPR spacer
tttttccaggtcgaaagcttcatacccatttctt	Protospacer
.. * *** ************* *********..

16. spacer 3.1|2937702|30|NC_015222|CRISPRCasFinder,CRT matches to NZ_CP016746 (Lactococcus lactis subsp. cremoris strain JM1 plasmid pMPJM1, complete sequence) position: , mismatch: 8, identity: 0.733

gaactttaaaacatttgtgataaaattttg	CRISPR spacer
aatggttaaaacatttgtgatgaaatcatt	Protospacer
.*   ****************.****. *

17. spacer 3.1|2937702|30|NC_015222|CRISPRCasFinder,CRT matches to MN694363 (Marine virus AFVG_250M224, complete genome) position: , mismatch: 8, identity: 0.733

gaactttaaaacatttgtgataaaattttg	CRISPR spacer
tgattttaaaacatttgtgactaaattagc	Protospacer
 .*.****************. *****

18. spacer 3.2|2937767|30|NC_015222|CRISPRCasFinder,CRT matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 8, identity: 0.733

tccatctgtttgcggtactcgtaggctata	CRISPR spacer
acgatcggcttgcggtactcgtaggcgtag	Protospacer
 * *** *.*****************   .

19. spacer 3.2|2937767|30|NC_015222|CRISPRCasFinder,CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 8, identity: 0.733

tccatctgtttgcggtactcgtaggctata	CRISPR spacer
acgatcggcttgcggtactcgtaggcgtag	Protospacer
 * *** *.*****************   .

20. spacer 3.4|2937898|31|NC_015222|CRISPRCasFinder,CRT matches to HM452126 (Aeromonas phage phiAS5, complete genome) position: , mismatch: 8, identity: 0.742

tgaatccattgagcttggtgaacatacatac	CRISPR spacer
tgaatccagtgagcttggtgaagtaattcag	Protospacer
******** *************   *. .*

21. spacer 3.7|2938096|30|NC_015222|CRISPRCasFinder,CRT matches to MT820023 (Cryophage ML09, complete genome) position: , mismatch: 8, identity: 0.733

ctaatgaattgatatccgcattagagcgca	CRISPR spacer
ataatgaatttatatcagcattagaaaaat	Protospacer
 ********* ***** ********. .

22. spacer 3.7|2938096|30|NC_015222|CRISPRCasFinder,CRT matches to NZ_CP024432 (Klebsiella pneumoniae strain DA48896 plasmid p48896_3, complete sequence) position: , mismatch: 8, identity: 0.733

ctaatgaattgatatccgcattagagcgca	CRISPR spacer
ttaatgaattggtttccgcattaggtatcg	Protospacer
.**********.* **********.   *.

23. spacer 2.4|1386409|33|NC_015222|PILER-CR,CRISPRCasFinder,CRT matches to LC168164 (Tenacibaculum phage pT24 DNA, complete genome) position: , mismatch: 9, identity: 0.727

tgctaatatttctttatgttcggatatcttatc	CRISPR spacer
tcttaatatttcattatgttcagatatatcgat	Protospacer
* .********* ********.***** *.. .

24. spacer 2.12|1386933|32|NC_015222|PILER-CR,CRISPRCasFinder,CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 9, identity: 0.719

aaaacattctaggatatcgcgccgccagcaag	CRISPR spacer
cctgggttccgggatatcgcgccgccagcagg	Protospacer
   . .***..*******************.*

25. spacer 2.30|1388107|33|NC_015222|PILER-CR,CRISPRCasFinder,CRT matches to MT584811 (Sulfitobacter phage phiGT1, complete genome) position: , mismatch: 9, identity: 0.727

ttgcttgacatcgcccgtgaccagatcaagaac	CRISPR spacer
gaatccgccagcgcccgtgaacagatcaagaac	Protospacer
  ....* ** ********* ************

26. spacer 3.17|2938746|30|NC_015222|CRISPRCasFinder,CRT,PILER-CR matches to LC371242 (Escherichia phage EcS1 DNA, complete sequence) position: , mismatch: 9, identity: 0.7

agccgacttggatttgatgcggaaatctca	CRISPR spacer
ttaaaacttggatttgatgttgaaatcttt	Protospacer
    .**************. *******.

27. spacer 2.26|1387846|34|NC_015222|PILER-CR,CRISPRCasFinder,CRT matches to MK494105 (Mycobacterium phage Pinnie, complete genome) position: , mismatch: 10, identity: 0.706

agattatggacggtacggcgcgcgatttgggatt-----	CRISPR spacer
tgattctggacggtgcggcgcgcga-----agttctcgt	Protospacer
 **** ********.**********     ..**

28. spacer 3.4|2937898|31|NC_015222|CRISPRCasFinder,CRT matches to KX397369 (Erwinia phage vB_EamM_Kwan, complete genome) position: , mismatch: 10, identity: 0.677

tgaatccattgagcttggtgaacatacatac	CRISPR spacer
agaattcatcgagcttggtgaacagtggggt	Protospacer
 ****.***.**************   . ..

29. spacer 3.4|2937898|31|NC_015222|CRISPRCasFinder,CRT matches to NC_048016 (Erwinia phage Wellington, complete genome) position: , mismatch: 10, identity: 0.677

tgaatccattgagcttggtgaacatacatac	CRISPR spacer
agaattcatcgagcttggtgaacagtggggt	Protospacer
 ****.***.**************   . ..

30. spacer 3.18|2938811|30|NC_015222|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 10, identity: 0.667

atccgactggatgaaaacgtcgcctttttt	CRISPR spacer
tattatctggatgataacgtcgcctttgaa	Protospacer
  ... ******** ************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

115044 : 243734

109

Escherichia_phage(21.43%)

transposase,tRNA,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013646289.1\|115044_116628_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.9e-92	38.5
WP_013646290.1\|116764_117769_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_013646291.1\|117802_118321_-	hypothetical protein	NA	NA	NA	NA
WP_013646292.1\|118341_120987_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	1.3e-185	41.7
WP_013646293.1\|121216_121423_-	dodecin domain-containing protein	NA	NA	NA	NA
WP_013646294.1\|121600_122386_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_013646295.1\|122390_122777_-	VOC family protein	NA	NA	NA	NA
WP_013646296.1\|123079_123571_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_013646297.1\|123635_125354_+	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	8.1e-16	31.8
WP_013646298.1\|125817_126786_-	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	8.3e-18	52.4
WP_013646299.1\|126782_127883_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_013646300.1\|127934_129848_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_150102823.1\|129844_130396_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_013646302.1\|130376_131267_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_013646303.1\|131345_132404_-	rod shape-determining protein	NA	NA	NA	NA
WP_013646304.1\|132534_132822_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_013646305.1\|132913_134362_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_013646306.1\|134407_135847_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_013646307.1\|135912_136284_-	DUF393 domain-containing protein	NA	NA	NA	NA
WP_013646308.1\|136216_136507_-	hypothetical protein	NA	NA	NA	NA
WP_013646309.1\|136747_145408_+	hypothetical protein	NA	NA	NA	NA
WP_013646310.1\|145554_148290_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_013646311.1\|148340_149345_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_013646312.1\|149568_150294_-	response regulator transcription factor	NA	NA	NA	NA
WP_013646313.1\|150746_151577_+	inositol monophosphatase	NA	NA	NA	NA
WP_013646314.1\|151729_153019_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_013646315.1\|153074_153275_-	YbdD/YjiX family protein	NA	NA	NA	NA
WP_013646316.1\|153293_155366_-	carbon starvation protein A	NA	NA	NA	NA
WP_013646317.1\|155419_156046_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	9.1e-26	36.5
WP_013646318.1\|156011_156827_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	8.6e-08	27.5
WP_013646319.1\|156864_158067_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_013646320.1\|158093_158759_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_013646321.1\|158751_159384_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_013646322.1\|159407_160280_-	PHP domain-containing protein	NA	NA	NA	NA
WP_013646324.1\|160407_161631_+	NnrS family protein	NA	NA	NA	NA
WP_013646325.1\|161818_162232_+	hypothetical protein	NA	NA	NA	NA
WP_013646327.1\|162730_163873_-	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	7.0e-08	25.3
WP_013646328.1\|163953_164490_-	hypothetical protein	NA	NA	NA	NA
WP_013646329.1\|164898_166116_+	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA
WP_150102824.1\|166223_167219_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_013646331.1\|167224_169114_+	polysaccharide biosynthesis protein	A0A285PXI2	Cedratvirus	7.6e-07	27.0
WP_013646332.1\|169142_170855_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_013646333.1\|171005_171938_+	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	8.3e-100	61.4
WP_013646334.1\|171954_172500_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	5.5e-51	56.2
WP_013646335.1\|172552_173902_+	DNA repair protein RadA	NA	NA	NA	NA
WP_150102723.1\|173958_174789_+	alkaline phytoceramidase	NA	NA	NA	NA
WP_013646337.1\|175245_177069_+	fatty acyl-AMP ligase	NA	NA	NA	NA
WP_013646338.1\|177074_177989_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_013646339.1\|178018_178276_+	acyl carrier protein	NA	NA	NA	NA
WP_013646340.1\|178275_179469_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_041362569.1\|179596_180247_+	hypothetical protein	NA	NA	NA	NA
WP_013646342.1\|180387_181722_-	PhoH family protein	A0A2I7SAD7	Vibrio_phage	6.0e-43	29.5
WP_190274722.1\|181924_182323_+\|transposase	transposase	NA	NA	NA	NA
WP_013646343.1\|182214_183369_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	6.4e-41	37.6
WP_150102725.1\|184119_185338_+\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	4.3e-96	60.1
WP_013646345.1\|185451_186537_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_013646346.1\|186755_189059_-\|transposase	IS21 family transposase	A0A2L1IVB6	Escherichia_phage	1.0e-29	35.0
WP_013646347.1\|189244_189439_-	hypothetical protein	NA	NA	NA	NA
WP_013646348.1\|190693_191968_+	hypothetical protein	NA	NA	NA	NA
WP_013646349.1\|192079_192871_+	hypothetical protein	NA	NA	NA	NA
WP_013646350.1\|193226_195179_-	AAA family ATPase	NA	NA	NA	NA
WP_013646351.1\|195559_196465_+	hypothetical protein	NA	NA	NA	NA
WP_013646352.1\|196581_197964_+	replication initiation factor	NA	NA	NA	NA
WP_041362070.1\|197960_198290_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013646354.1\|199476_199848_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_013646355.1\|199853_201152_+	relaxase	NA	NA	NA	NA
WP_013646356.1\|201189_201738_+	hypothetical protein	NA	NA	NA	NA
WP_150102827.1\|201773_202478_-	glutaredoxin	NA	NA	NA	NA
WP_013646358.1\|203178_203583_+	DoxX family protein	NA	NA	NA	NA
WP_013646359.1\|203848_204220_+	hypothetical protein	NA	NA	NA	NA
WP_150102726.1\|204325_205018_+	hypothetical protein	NA	NA	NA	NA
WP_013646289.1\|205386_206970_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.9e-92	38.5
WP_013646288.1\|207023_207374_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.4e-13	35.3
WP_013646287.1\|207361_207658_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_013646361.1\|208136_209003_-	hypothetical protein	NA	NA	NA	NA
WP_013646362.1\|209069_209375_-	hypothetical protein	NA	NA	NA	NA
WP_013646363.1\|209620_210181_+	recombinase family protein	A0A219YA40	Aeromonas_phage	2.7e-13	31.0
WP_013646364.1\|210226_210733_-	antirestriction protein ArdA	NA	NA	NA	NA
WP_150102728.1\|210718_210961_+	hypothetical protein	NA	NA	NA	NA
WP_190274737.1\|211082_211421_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	2.8e-21	59.3
WP_013646366.1\|211413_211743_+	putative addiction module antidote protein	NA	NA	NA	NA
WP_150102828.1\|211897_212155_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_013646278.1\|212298_213606_+\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	5.4e-36	38.0
WP_013646368.1\|214677_217335_+	AAA family ATPase	A0A1B1IUG5	uncultured_Mediterranean_phage	8.9e-46	27.2
WP_190274723.1\|217663_217990_+	hypothetical protein	NA	NA	NA	NA
WP_013646369.1\|218507_219581_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_013646370.1\|219691_220597_-	hypothetical protein	NA	NA	NA	NA
WP_013646371.1\|220749_222381_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_013646372.1\|222385_223678_-	hypothetical protein	NA	NA	NA	NA
WP_013646373.1\|223691_224708_-	hypothetical protein	NA	NA	NA	NA
WP_013646374.1\|224881_225247_-	hypothetical protein	NA	NA	NA	NA
WP_013646375.1\|225467_225734_+	hypothetical protein	NA	NA	NA	NA
WP_013646376.1\|225853_229291_+	sel1 repeat family protein	NA	NA	NA	NA
WP_013646289.1\|229548_231132_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.9e-92	38.5
WP_013646288.1\|231185_231536_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.4e-13	35.3
WP_013646287.1\|231523_231820_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_013646378.1\|232161_233715_+	recombinase family protein	A0A1B0RXM0	Streptococcus_phage	8.7e-09	22.6
WP_013646379.1\|234767_235550_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	8.3e-77	57.0
WP_013646380.1\|235546_236569_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.6e-67	41.3
WP_013646381.1\|237160_237427_+	type II toxin-antitoxin system RelE/ParE family toxin	Q8W6N1	Burkholderia_virus	2.1e-08	35.7
WP_013646382.1\|237423_237756_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013646383.1\|237776_238067_-	BrnA antitoxin family protein	NA	NA	NA	NA
WP_013646384.1\|238035_238305_-	BrnT family toxin	NA	NA	NA	NA
WP_150102829.1\|238416_239088_+	hypothetical protein	NA	NA	NA	NA
WP_013646386.1\|239269_239464_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013646387.1\|239471_241160_+	replication endonuclease	R4JJS4	Burkholderia_phage	2.0e-91	35.0
WP_013646388.1\|241533_241974_+	hypothetical protein	NA	NA	NA	NA
WP_013646389.1\|242107_242386_+	hypothetical protein	NA	NA	NA	NA
WP_013646390.1\|242504_243734_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.6e-50	45.5

DBSCAN-SWA_2

632897 : 680941

Escherichia_phage(23.08%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013646743.1\|632897_633878_+\|transposase	transposase	NA	NA	NA	NA
WP_013646744.1\|633970_634960_+	class I SAM-dependent methyltransferase	E3T531	Cafeteria_roenbergensis_virus	6.7e-07	30.7
WP_013646745.1\|634988_635672_+	O-methyltransferase	NA	NA	NA	NA
WP_013646746.1\|635837_636092_+	DUF2024 family protein	NA	NA	NA	NA
WP_013646747.1\|636197_636713_+	hypothetical protein	NA	NA	NA	NA
WP_013646748.1\|636776_637121_+	arsenate reductase family protein	A0A2H4J8T1	uncultured_Caudovirales_phage	6.6e-10	35.4
WP_013646749.1\|637215_637638_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_013646750.1\|637624_638431_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_041362126.1\|638441_638954_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_013646752.1\|638977_639244_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_150102742.1\|639466_640771_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_013646754.1\|640864_641491_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA
WP_013646755.1\|641565_642129_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_013646756.1\|642141_642627_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_013646757.1\|642607_643114_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_013646758.1\|643110_644064_+	aspartate carbamoyltransferase catalytic subunit	A0A1J0F9B8	Only_Syngen_Nebraska_virus	1.3e-28	38.4
WP_013646759.1\|644081_645356_+	dihydroorotase	NA	NA	NA	NA
WP_013646760.1\|645423_647517_+	M3 family metallopeptidase	A0A1V0SD92	Indivirus	8.6e-44	24.2
WP_013646761.1\|647749_648514_+	VacJ family lipoprotein	NA	NA	NA	NA
WP_013646762.1\|648878_650033_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_013646763.1\|650114_650720_+	septation protein A	NA	NA	NA	NA
WP_041362668.1\|650719_651022_+	YciI family protein	NA	NA	NA	NA
WP_013646765.1\|651176_651971_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_013646766.1\|652001_653084_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	5.4e-26	28.6
WP_013646767.1\|653300_654575_+	lysophospholipid transporter LplT	NA	NA	NA	NA
WP_013646768.1\|654591_655347_-	uracil-DNA glycosylase	A0A218MKQ4	uncultured_virus	4.2e-17	34.8
WP_013646769.1\|655343_655814_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_013646770.1\|655797_656472_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_150102837.1\|656553_657096_-	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA
WP_041362669.1\|657095_657581_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_013646773.1\|657586_658291_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_013646774.1\|658506_659613_+	peptide chain release factor 2	NA	NA	NA	NA
WP_013646775.1\|665384_666329_+	S49 family peptidase	NA	NA	NA	NA
WP_150102743.1\|666431_666641_+	hypothetical protein	Q38213	Escherichia_phage	3.6e-11	45.2
WP_190274726.1\|666987_667404_+\|transposase	transposase	A0A077K814	Ralstonia_phage	3.9e-17	52.5
WP_013646505.1\|669871_671179_-\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	3.1e-36	38.4
WP_083810500.1\|671298_671736_-\|transposase	IS630 family transposase	A0A1V0SCG6	Indivirus	4.6e-08	27.3
WP_013646777.1\|671863_672244_-\|transposase	transposase	NA	NA	NA	NA
WP_013646778.1\|672474_673386_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.4e-27	32.2
WP_013646779.1\|673385_674441_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	2.0e-86	48.3
WP_013646780.1\|674532_675885_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_013646781.1\|675853_676822_-	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_013646782.1\|677100_677625_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_150102745.1\|677716_678283_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_049782527.1\|678287_679412_+	cupin domain-containing protein	NA	NA	NA	NA
WP_013646278.1\|679633_680941_+\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	5.4e-36	38.0

DBSCAN-SWA_3

891955 : 928360

Shigella_phage(25.0%)

integrase,transposase,tRNA

attL 881979:881992|attR 929897:929910

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
881979:881992	attL	NA	NA	NA	NA
WP_013646957.1\|891955_892753_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_013646958.1\|892779_893397_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_013646959.1\|893393_894593_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_013646960.1\|894799_895663_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_013646961.1\|895690_896560_+	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA
WP_013646962.1\|896580_897879_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_013646963.1\|897895_898603_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_013646964.1\|898687_899194_+	CvpA family protein	NA	NA	NA	NA
WP_013646965.1\|899304_900825_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.0e-83	39.8
WP_013646966.1\|900932_902111_+	O-succinylhomoserine sulfhydrylase	NA	NA	NA	NA
WP_013646967.1\|902167_902659_-	peptidyl-prolyl cis-trans isomerase	A0A2H4UTF4	Bodo_saltans_virus	2.1e-09	32.2
WP_013646968.1\|902689_903271_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_013646969.1\|903412_904792_+\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	5.1e-45	29.2
WP_150102753.1\|904810_905563_-	hypothetical protein	NA	NA	NA	NA
WP_013646971.1\|905580_906519_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_013646972.1\|906569_907430_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_013646973.1\|907665_909477_-	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	2.6e-41	26.9
WP_013646974.1\|909499_910777_-	divalent metal cation transporter	NA	NA	NA	NA
WP_013646975.1\|910997_911402_+	hypothetical protein	NA	NA	NA	NA
WP_013646976.1\|911398_911701_-	hypothetical protein	NA	NA	NA	NA
WP_013646977.1\|911741_913460_-	Kef family K(+) transporter	NA	NA	NA	NA
WP_013646978.1\|913550_915419_-	hypothetical protein	NA	NA	NA	NA
WP_013646979.1\|915628_917980_-	hypothetical protein	NA	NA	NA	NA
WP_150102754.1\|918248_918923_-	hypothetical protein	NA	NA	NA	NA
WP_013646981.1\|919296_920379_+	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA
WP_083810509.1\|920484_920958_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.4e-42	55.0
WP_083810510.1\|920958_921348_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.1e-05	31.5
WP_013646982.1\|922576_922876_-\|transposase	transposase	NA	NA	NA	NA
WP_013646983.1\|922935_923667_-	plasmid recombination protein	NA	NA	NA	NA
WP_013646984.1\|923670_923811_-	hypothetical protein	NA	NA	NA	NA
WP_013646985.1\|923803_924100_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013646986.1\|924101_924347_-	transcriptional regulator	NA	NA	NA	NA
WP_013646987.1\|924459_925200_-	hypothetical protein	NA	NA	NA	NA
WP_013646988.1\|925202_926408_-\|integrase	tyrosine-type recombinase/integrase	B7SYF8	Stenotrophomonas_phage	9.7e-109	50.8
WP_013646982.1\|926874_927174_+\|transposase	transposase	NA	NA	NA	NA
WP_013646989.1\|927205_928360_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.3e-41	37.6
929897:929910	attR	NA	NA	NA	NA

DBSCAN-SWA_4

993712 : 999856

Pneumococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013647045.1\|993712_994132_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	3.3e-24	52.5
WP_013647046.1\|994286_995579_+	LysM peptidoglycan-binding domain-containing protein	A0A172JIA8	Bacillus_phage	3.0e-07	33.9
WP_013647047.1\|995626_997087_-	leucyl aminopeptidase family protein	Q6GYZ8	Mycoplasma_phage	2.0e-31	31.5
WP_013647048.1\|997255_998050_+	thymidylate synthase	A6M9A2	Geobacillus_virus	4.9e-101	64.0
WP_013647049.1\|998046_998550_+	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	1.8e-32	49.3
WP_013647050.1\|998680_999856_-	type III PLP-dependent enzyme	A0A060D2X4	Bovine_gammaherpesvirus	4.1e-51	35.6

DBSCAN-SWA_5

1139049 : 1171957

Staphylococcus_phage(16.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013647198.1\|1139049_1140324_+\|tRNA	histidine--tRNA ligase	A0A1V0SLE3	Klosneuvirus	6.4e-18	23.9
WP_013647199.1\|1140354_1140993_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_013647200.1\|1140970_1142227_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
WP_013647201.1\|1142311_1143706_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_013647202.1\|1145108_1146275_+	response regulator	NA	NA	NA	NA
WP_049782536.1\|1146398_1146656_-	hypothetical protein	E5E3P6	Burkholderia_phage	6.6e-15	51.9
WP_013647203.1\|1146935_1147322_-	hypothetical protein	NA	NA	NA	NA
WP_190274730.1\|1147426_1147645_-	hypothetical protein	NA	NA	NA	NA
WP_013646982.1\|1147724_1148024_+\|transposase	transposase	NA	NA	NA	NA
WP_013646989.1\|1148055_1149210_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.3e-41	37.6
WP_083810510.1\|1149251_1149641_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.1e-05	31.5
WP_190274731.1\|1149745_1150114_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	8.3e-27	49.2
WP_013647206.1\|1150226_1151135_+	TIGR01777 family protein	NA	NA	NA	NA
WP_013647207.1\|1151162_1152467_+	deoxyribodipyrimidine photo-lyase	A0A2H4UV63	Bodo_saltans_virus	5.5e-73	37.5
WP_013647208.1\|1152494_1153196_-	hypothetical protein	NA	NA	NA	NA
WP_013647210.1\|1154472_1154793_+	hypothetical protein	NA	NA	NA	NA
WP_013647211.1\|1154873_1155173_+	peptidase	NA	NA	NA	NA
WP_013647212.1\|1155244_1155931_+	response regulator transcription factor	NA	NA	NA	NA
WP_013647213.1\|1155927_1157268_+	GHKL domain-containing protein	W8CYF6	Bacillus_phage	2.2e-13	21.2
WP_190274732.1\|1157328_1157859_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_013647215.1\|1158143_1158416_-	TMEM165/GDT1 family protein	NA	NA	NA	NA
WP_013647216.1\|1158606_1159614_+	NAD(P)-dependent alcohol dehydrogenase	A0A2L2DIY2	Acanthamoeba_polyphaga_mimivirus	3.6e-40	29.6
WP_013647217.1\|1159888_1161055_-	cell division protein ZapE	NA	NA	NA	NA
WP_013647218.1\|1161076_1162453_-	MFS transporter	NA	NA	NA	NA
WP_013647219.1\|1162449_1163223_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	8.9e-23	26.8
WP_013647220.1\|1163249_1163894_+	orotate phosphoribosyltransferase	NA	NA	NA	NA
WP_013647221.1\|1164045_1164825_-	HNH endonuclease	NA	NA	NA	NA
WP_041362793.1\|1164821_1165520_-	RNA ligase family protein	A0A2H4UUE0	Bodo_saltans_virus	5.8e-05	39.1
WP_013647223.1\|1165522_1166059_-	hypothetical protein	NA	NA	NA	NA
WP_013647224.1\|1166051_1167341_-	DUF3696 domain-containing protein	NA	NA	NA	NA
WP_013646989.1\|1168438_1169593_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.3e-41	37.6
WP_150102759.1\|1170738_1171957_+\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	1.9e-96	60.4

DBSCAN-SWA_6

1198461 : 1226226

Hokovirus(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_190274733.1\|1198461_1198902_-\|transposase	transposase	NA	NA	NA	NA
WP_083810519.1\|1198989_1199199_-\|transposase	transposase	NA	NA	NA	NA
WP_013647244.1\|1199378_1200845_+	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	4.0e-16	26.0
WP_013647245.1\|1200850_1201297_+	response regulator	NA	NA	NA	NA
WP_013647246.1\|1201303_1202758_+	response regulator	NA	NA	NA	NA
WP_013647247.1\|1202750_1203383_+	response regulator transcription factor	NA	NA	NA	NA
WP_013647248.1\|1203464_1204358_+\|transposase	IS1595-like element ISNtsp5 family transposase	NA	NA	NA	NA
WP_013646289.1\|1204776_1206360_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.9e-92	38.5
WP_013646288.1\|1206413_1206764_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.4e-13	35.3
WP_013646287.1\|1206751_1207048_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_083810520.1\|1207092_1207335_-\|transposase	transposase	NA	NA	NA	NA
WP_150102761.1\|1207359_1207749_-\|transposase	transposase	NA	NA	NA	NA
WP_150102762.1\|1207784_1208114_-\|transposase	transposase	NA	NA	NA	NA
WP_013647249.1\|1208311_1208512_+	50S ribosomal protein L31	NA	NA	NA	NA
WP_013647250.1\|1208609_1208921_-	cupin domain-containing protein	NA	NA	NA	NA
WP_013647251.1\|1209733_1210702_+	peptidyl-prolyl cis-trans isomerase, EpsD family	NA	NA	NA	NA
WP_013647252.1\|1210743_1211562_+	polysaccharide export protein EpsE	NA	NA	NA	NA
WP_013647253.1\|1211641_1213006_+	chain length determinant protein EpsF	NA	NA	NA	NA
WP_013647254.1\|1213035_1213941_+	chain length determinant protein tyrosine kinase EpsG	NA	NA	NA	NA
WP_013647255.1\|1213959_1214850_+	exosortase B	NA	NA	NA	NA
WP_013647256.1\|1215533_1216220_+	EpsI family protein	NA	NA	NA	NA
WP_013647257.1\|1216483_1217986_+	hypothetical protein	NA	NA	NA	NA
WP_013647258.1\|1218175_1218895_+	sulfotransferase family 2 domain-containing protein	B2ZYD5	Ralstonia_phage	1.9e-14	29.2
WP_013647259.1\|1218935_1219823_+	sulfotransferase	NA	NA	NA	NA
WP_013647260.1\|1220099_1221242_+	hypothetical protein	NA	NA	NA	NA
WP_013647261.1\|1221329_1222205_+	sulfotransferase	NA	NA	NA	NA
WP_150102764.1\|1222387_1222888_+\|transposase	transposase	Q38213	Escherichia_phage	6.6e-27	47.1
WP_190274727.1\|1222887_1223028_+	hypothetical protein	NA	NA	NA	NA
WP_013647262.1\|1223556_1224771_+	glycosyltransferase	NA	NA	NA	NA
WP_041362209.1\|1224767_1225274_+	hypothetical protein	NA	NA	NA	NA
WP_013646281.1\|1225332_1226226_+\|transposase	IS1595 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1269511 : 1353836

Stx2-converting_phage(22.22%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013647302.1\|1269511_1271272_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_013647303.1\|1271382_1272123_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_013647304.1\|1272241_1274467_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.8e-71	34.1
WP_013647306.1\|1275187_1275613_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA
WP_013647307.1\|1275722_1277852_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_013647308.1\|1277984_1278254_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_013647309.1\|1278605_1280069_-	dynamin family protein	NA	NA	NA	NA
WP_013647310.1\|1280606_1281500_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_013647311.1\|1281729_1282758_-	folate-binding protein YgfZ	NA	NA	NA	NA
WP_013647312.1\|1282880_1283315_+	hypothetical protein	NA	NA	NA	NA
WP_013647313.1\|1283576_1284026_+	hypothetical protein	NA	NA	NA	NA
WP_013647314.1\|1284296_1284659_-	exosortase system-associated protein, TIGR04073 family	NA	NA	NA	NA
WP_013647315.1\|1284723_1285248_-	hypothetical protein	NA	NA	NA	NA
WP_013647316.1\|1285876_1286746_+	phosphoribulokinase	NA	NA	NA	NA
WP_013647317.1\|1286893_1289110_+	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	2.6e-107	36.7
WP_013647318.1\|1289211_1291353_-	hypothetical protein	NA	NA	NA	NA
WP_013647319.1\|1292012_1294151_-	hypothetical protein	NA	NA	NA	NA
WP_041362218.1\|1294816_1295128_-	BolA/IbaG family iron-sulfur metabolism protein	NA	NA	NA	NA
WP_013647321.1\|1295515_1296427_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_013647323.1\|1296759_1296957_+	hypothetical protein	NA	NA	NA	NA
WP_013647324.1\|1297221_1298946_-	dihydroxyacetone kinase family protein	NA	NA	NA	NA
WP_013647325.1\|1299106_1302817_-	response regulator	A0A1V0SGX0	Hokovirus	1.6e-56	32.9
WP_150102847.1\|1303295_1304597_+	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_013647327.1\|1304593_1306039_+	undecaprenyl-phosphate glucose phosphotransferase	NA	NA	NA	NA
WP_013646281.1\|1306226_1307120_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_013647328.1\|1307227_1307551_+	ferredoxin family protein	NA	NA	NA	NA
WP_013647329.1\|1307579_1310351_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_013647330.1\|1310343_1313820_+	UvrD-helicase domain-containing protein	G3MA40	Bacillus_virus	1.8e-06	21.5
WP_013646791.1\|1314147_1314957_+	methane monooxygenase/ammonia monooxygenase subunit C	NA	NA	NA	NA
WP_013646792.1\|1315131_1315956_+	methane monooxygenase/ammonia monooxygenase subunit A	NA	NA	NA	NA
WP_013646793.1\|1315955_1317218_+	methane monooxygenase/ammonia monooxygenase subunit B	NA	NA	NA	NA
WP_013647332.1\|1317884_1319495_-	APC family permease	NA	NA	NA	NA
WP_013647333.1\|1319753_1321169_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
WP_013647334.1\|1321563_1323312_-	gamma-glutamyltransferase	NA	NA	NA	NA
WP_013647335.1\|1323555_1324035_+	BON domain-containing protein	NA	NA	NA	NA
WP_013647336.1\|1324043_1325186_+	DUF1207 domain-containing protein	NA	NA	NA	NA
WP_013647337.1\|1325458_1326424_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_013647339.1\|1326961_1328209_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.0e-28	34.4
WP_083810526.1\|1328400_1329129_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_013647341.1\|1329097_1329913_-	thiazole synthase	NA	NA	NA	NA
WP_013647342.1\|1329954_1330158_-	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_013647343.1\|1330380_1331814_-	M10 family metallopeptidase	NA	NA	NA	NA
WP_013647344.1\|1332758_1333622_+	nucleotide-binding protein	NA	NA	NA	NA
WP_013647345.1\|1334132_1335182_-	Fic family protein	NA	NA	NA	NA
WP_013647346.1\|1335350_1335572_+	hypothetical protein	NA	NA	NA	NA
WP_013647347.1\|1335963_1337736_+	hypothetical protein	NA	NA	NA	NA
WP_013647348.1\|1337864_1338155_+	hypothetical protein	NA	NA	NA	NA
WP_013646289.1\|1338548_1340132_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.9e-92	38.5
WP_013646288.1\|1340185_1340536_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.4e-13	35.3
WP_013646287.1\|1340523_1340820_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_041362844.1\|1341116_1342553_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_013647351.1\|1342536_1345779_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_041362225.1\|1345802_1346888_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_190274746.1\|1347128_1347407_+	hypothetical protein	NA	NA	NA	NA
WP_150102770.1\|1347343_1347592_+	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_041362233.1\|1347595_1347994_+	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_013647353.1\|1348485_1348845_+	DUF4202 domain-containing protein	NA	NA	NA	NA
WP_013647354.1\|1348944_1349844_-\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	1.1e-96	60.4
WP_013646989.1\|1349950_1351105_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.3e-41	37.6
WP_041362237.1\|1352327_1353836_-\|transposase	IS21 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

1751841 : 1846348

Shigella_phage(23.53%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049782549.1\|1751841_1752618_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_013646390.1\|1753426_1754656_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.6e-50	45.5
WP_150102860.1\|1756807_1758226_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.9e-55	34.8
WP_013647698.1\|1758464_1759154_-	NapC/NirT family cytochrome c	NA	NA	NA	NA
WP_013647699.1\|1759153_1759876_-	cytochrome c family protein	NA	NA	NA	NA
WP_150102778.1\|1760001_1761033_-	hydroxylamine oxidation protein HaoB	NA	NA	NA	NA
WP_013647701.1\|1761029_1762742_-	hydroxylamine reductase	NA	NA	NA	NA
WP_013647702.1\|1763018_1763282_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_150102779.1\|1764128_1764593_-	hypothetical protein	NA	NA	NA	NA
WP_150102780.1\|1764687_1765278_-	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_013647706.1\|1765368_1766124_-	hypothetical protein	NA	NA	NA	NA
WP_013647707.1\|1766878_1768183_+	amidohydrolase family protein	NA	NA	NA	NA
WP_013647708.1\|1768191_1769739_+	fused MFS/spermidine synthase	NA	NA	NA	NA
WP_013647709.1\|1769817_1770063_+	hypothetical protein	NA	NA	NA	NA
WP_013647710.1\|1770148_1771828_-	DNA repair protein RecN	NA	NA	NA	NA
WP_013647711.1\|1771853_1772726_-	NAD kinase	NA	NA	NA	NA
WP_013647712.1\|1773020_1774040_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_013647713.1\|1774178_1775264_+	ferrochelatase	NA	NA	NA	NA
WP_013647714.1\|1775312_1775657_-	hypothetical protein	NA	NA	NA	NA
WP_013647715.1\|1777470_1777758_+	hypothetical protein	NA	NA	NA	NA
WP_013647716.1\|1778290_1778629_+	hypothetical protein	NA	NA	NA	NA
WP_013647717.1\|1778968_1780138_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_083810538.1\|1780864_1781140_-\|transposase	transposase	NA	NA	NA	NA
WP_049782554.1\|1781164_1781914_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_013646905.1\|1782731_1783712_-\|transposase	transposase	NA	NA	NA	NA
WP_013647718.1\|1783803_1784685_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.1e-66	48.1
WP_013647719.1\|1784742_1785777_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	4.6e-75	43.5
WP_013647720.1\|1785856_1786816_-	DHH family phosphoesterase	NA	NA	NA	NA
WP_013647721.1\|1786896_1788801_-	sulfate adenylyltransferase subunit CysN	A0A1V0SGC3	Hokovirus	7.3e-34	29.9
WP_013647722.1\|1788800_1789697_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
WP_013647724.1\|1790272_1790605_-	Na+/H+ antiporter subunit G	NA	NA	NA	NA
WP_013647725.1\|1790608_1790878_-	K+/H+ antiporter subunit F	NA	NA	NA	NA
WP_041362996.1\|1790877_1791363_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA
WP_150102861.1\|1791368_1792901_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
WP_013647728.1\|1792900_1793230_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA
WP_013647729.1\|1793229_1796034_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
WP_013647731.1\|1796772_1798479_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	5.9e-19	33.9
WP_150102781.1\|1798554_1798758_-	hypothetical protein	NA	NA	NA	NA
WP_013647733.1\|1801288_1802902_+	long-chain-fatty-acid--CoA ligase	NA	NA	NA	NA
WP_049782555.1\|1802973_1803294_+	penicillin acylase family protein	NA	NA	NA	NA
WP_150102782.1\|1803230_1803668_+	penicillin acylase family protein	NA	NA	NA	NA
WP_083810542.1\|1803589_1804921_+	penicillin acylase family protein	NA	NA	NA	NA
WP_013646505.1\|1805014_1806322_-\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	3.1e-36	38.4
WP_041362329.1\|1806416_1806713_+	hypothetical protein	NA	NA	NA	NA
WP_013647734.1\|1806905_1807250_+	exosortase system-associated protein, TIGR04073 family	NA	NA	NA	NA
WP_013647735.1\|1807470_1808364_-\|protease	protease HtpX	NA	NA	NA	NA
WP_013647736.1\|1808530_1808839_-	cell division protein FtsB	NA	NA	NA	NA
WP_013647737.1\|1808838_1810122_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	2.7e-141	59.8
WP_013647738.1\|1810275_1811952_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.5e-155	54.4
WP_013647739.1\|1812039_1812924_-	fructosamine kinase family protein	NA	NA	NA	NA
WP_013647740.1\|1812907_1814344_-	argininosuccinate lyase	NA	NA	NA	NA
WP_013647741.1\|1814585_1815200_+	hypothetical protein	NA	NA	NA	NA
WP_013647742.1\|1815272_1816526_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_013647743.1\|1816677_1817067_+	RidA family protein	NA	NA	NA	NA
WP_013647744.1\|1817071_1819111_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_083810509.1\|1820019_1820493_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.4e-42	55.0
WP_083810510.1\|1820493_1820883_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.1e-05	31.5
WP_013646982.1\|1822110_1822410_-\|transposase	transposase	NA	NA	NA	NA
WP_013647747.1\|1822895_1823270_+	hypothetical protein	NA	NA	NA	NA
WP_013647748.1\|1823729_1824092_-	hypothetical protein	NA	NA	NA	NA
WP_013647749.1\|1824456_1824771_+	hypothetical protein	NA	NA	NA	NA
WP_013647750.1\|1824777_1826115_-	DUF3422 domain-containing protein	NA	NA	NA	NA
WP_013647751.1\|1826284_1827622_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	NA	NA	NA
WP_013647752.1\|1827644_1829042_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_013646287.1\|1830272_1830569_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_013646288.1\|1830556_1830907_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.4e-13	35.3
WP_013646289.1\|1830960_1832544_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.9e-92	38.5
WP_083810510.1\|1833469_1833859_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.1e-05	31.5
WP_083810544.1\|1833859_1834333_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.4e-42	55.0
WP_190274744.1\|1834352_1834496_+	hypothetical protein	NA	NA	NA	NA
WP_150102783.1\|1834590_1834818_-	hypothetical protein	NA	NA	NA	NA
WP_013647754.1\|1835035_1835401_-	hypothetical protein	NA	NA	NA	NA
WP_013647755.1\|1835930_1836530_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_013646504.1\|1836604_1838221_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_013647756.1\|1838426_1838912_-	hypothetical protein	NA	NA	NA	NA
WP_013647757.1\|1839065_1839275_-	hypothetical protein	NA	NA	NA	NA
WP_013647758.1\|1839560_1840940_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_013647759.1\|1841006_1841297_-	hypothetical protein	NA	NA	NA	NA
WP_013646505.1\|1841461_1842769_+\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	3.1e-36	38.4
WP_013647760.1\|1843092_1844187_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_013647761.1\|1844666_1845098_+\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	1.4e-17	35.3
WP_083810545.1\|1845277_1845574_-\|transposase	transposase	NA	NA	NA	NA
WP_049782554.1\|1845598_1846348_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

2137902 : 2176980

Micromonas_sp._RCC1109_virus(50.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150102791.1\|2137902_2138052_+\|transposase	transposase	NA	NA	NA	NA
WP_150102792.1\|2138036_2138219_+	hypothetical protein	NA	NA	NA	NA
WP_041362378.1\|2138292_2138667_+	hypothetical protein	NA	NA	NA	NA
WP_013646905.1\|2140764_2141745_-\|transposase	transposase	NA	NA	NA	NA
WP_013648010.1\|2142115_2142550_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_013648011.1\|2142566_2143871_-	adenylosuccinate synthase	W5S5V7	Pithovirus	2.0e-67	35.3
WP_013648012.1\|2143912_2145064_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
WP_013648013.1\|2145104_2145290_-	DUF2065 domain-containing protein	NA	NA	NA	NA
WP_013648014.1\|2145525_2146401_-\|protease	protease modulator HflC	NA	NA	NA	NA
WP_013648015.1\|2146401_2147580_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_013648016.1\|2147600_2148773_-	GTPase HflX	NA	NA	NA	NA
WP_013648017.1\|2148787_2149033_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_013648018.1\|2149288_2150281_-	cytochrome-c peroxidase	NA	NA	NA	NA
WP_013648019.1\|2150453_2151014_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
WP_013648020.1\|2151226_2152936_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_013648021.1\|2152923_2153502_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_013648022.1\|2153585_2154050_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_013648023.1\|2154090_2155623_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	5.5e-08	37.1
WP_013648024.1\|2155853_2156627_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_013648025.1\|2156780_2157431_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_013648026.1\|2157494_2158511_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_013648027.1\|2158626_2159118_-	acetolactate synthase small subunit	NA	NA	NA	NA
WP_013648028.1\|2159125_2160829_-	acetolactate synthase 3 catalytic subunit	E5EQ70	Micromonas_sp._RCC1109_virus	3.7e-53	28.9
WP_013648029.1\|2160898_2162374_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_013648030.1\|2162453_2163284_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_013648032.1\|2163555_2166348_+	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA
WP_013648033.1\|2166531_2166981_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_013648034.1\|2167425_2169807_-	GspE/PulE family protein	NA	NA	NA	NA
WP_013648035.1\|2169818_2170583_-	3',5'-cyclic-nucleotide phosphodiesterase	NA	NA	NA	NA
WP_013648036.1\|2170604_2171030_-	universal stress protein	NA	NA	NA	NA
WP_013648037.1\|2171063_2171786_-	TerC family protein	A0A0S4KZH7	Pseudomonas_phage	3.3e-35	43.4
WP_013648038.1\|2171829_2173014_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_013648039.1\|2173006_2173264_-	hypothetical protein	NA	NA	NA	NA
WP_013648040.1\|2173424_2174387_+	prolyl aminopeptidase	NA	NA	NA	NA
WP_013648041.1\|2174433_2175150_-	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA
WP_013648042.1\|2175561_2176077_+	hypothetical protein	NA	NA	NA	NA
WP_013648043.1\|2176437_2176980_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA

DBSCAN-SWA_10

2343158 : 2442281

Escherichia_phage(24.24%)

integrase,transposase,tRNA,protease

attL 2418408:2418467|attR 2438017:2439001

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041362403.1\|2343158_2344280_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_013648191.1\|2344274_2344781_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_013648192.1\|2344744_2346214_+	N-acetylmuramoyl-L-alanine amidase	A0A067ZJB6	Vibrio_phage	5.3e-16	29.5
WP_013648193.1\|2346445_2347558_+	ABC transporter permease	NA	NA	NA	NA
WP_013648194.1\|2347562_2348372_+	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	1.2e-06	24.1
WP_013648195.1\|2348344_2349241_+	MCE family protein	NA	NA	NA	NA
WP_013648196.1\|2349237_2349864_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_013648198.1\|2350086_2351340_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_013648199.1\|2351409_2352468_+	phytoene/squalene synthase family protein	NA	NA	NA	NA
WP_013648200.1\|2352482_2353472_+	NAD-dependent epimerase/dehydratase family protein	A0A0K1L6Z1	Scale_drop_disease_virus	2.2e-13	35.3
WP_013648201.1\|2353771_2354179_+	chemotaxis response regulator CheY	Q56AR1	Bacillus_thuringiensis_phage	8.0e-07	30.4
WP_013648202.1\|2354211_2354970_+	protein phosphatase CheZ	NA	NA	NA	NA
WP_013648203.1\|2355670_2355898_+	hypothetical protein	NA	NA	NA	NA
WP_013648204.1\|2356313_2357141_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
WP_013648205.1\|2357156_2358662_-	carboxypeptidase M32	NA	NA	NA	NA
WP_013648206.1\|2358778_2359216_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
WP_013648207.1\|2359285_2359570_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013648208.1\|2359752_2360025_+	hypothetical protein	NA	NA	NA	NA
WP_013648209.1\|2360090_2360492_-	hypothetical protein	NA	NA	NA	NA
WP_013647423.1\|2360922_2362506_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.9e-91	38.3
WP_013646288.1\|2362559_2362910_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.4e-13	35.3
WP_013646287.1\|2362897_2363194_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_013648211.1\|2363916_2364369_-	PAS domain-containing protein	NA	NA	NA	NA
WP_013648212.1\|2364423_2364903_-	polyketide cyclase	NA	NA	NA	NA
WP_013648213.1\|2364926_2366090_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_190274741.1\|2366252_2367140_-\|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	NA	NA	NA	NA
WP_150102796.1\|2367301_2368520_+\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	2.8e-95	60.1
WP_013648216.1\|2368603_2369998_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA
WP_013648217.1\|2370036_2370564_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	6.7e-30	45.2
WP_013648218.1\|2370682_2371783_-	nitrite reductase, copper-containing	NA	NA	NA	NA
WP_013648219.1\|2372528_2373824_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_013648220.1\|2373832_2374819_+	glutathione synthase	NA	NA	NA	NA
WP_013648221.1\|2374977_2375898_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_013648222.1\|2375944_2377786_-\|protease	ATP-dependent zinc metalloprotease FtsH	A0A0P0CCN8	Ostreococcus_mediterraneus_virus	5.0e-104	40.9
WP_013648223.1\|2377907_2379257_-	outer membrane protein transport protein	NA	NA	NA	NA
WP_150102871.1\|2379719_2382002_+	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	5.5e-20	33.7
WP_013648225.1\|2382134_2382872_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_013646278.1\|2383738_2385046_+\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	5.4e-36	38.0
WP_083810562.1\|2385372_2385765_+\|transposase	transposase	NA	NA	NA	NA
WP_013646289.1\|2386069_2387653_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.9e-92	38.5
WP_013646288.1\|2387706_2388057_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.4e-13	35.3
WP_013646287.1\|2388044_2388341_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_013646281.1\|2388981_2389875_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_013648226.1\|2390030_2390564_-	peptide deformylase	E3SLL2	Synechococcus_phage	9.9e-13	36.5
WP_013648227.1\|2390553_2391300_-	S-methyl-5'-thioinosine phosphorylase	NA	NA	NA	NA
WP_013648228.1\|2391319_2391865_-	hypoxanthine-guanine phosphoribosyltransferase	A0A1V0SLD7	Klosneuvirus	2.5e-11	27.7
WP_013648229.1\|2391872_2393906_-	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	3.3e-141	43.1
WP_013648230.1\|2394027_2394852_+	DUF2914 domain-containing protein	NA	NA	NA	NA
WP_013648231.1\|2394890_2395436_+	NUDIX hydrolase	NA	NA	NA	NA
WP_013648232.1\|2395457_2396237_+	DUF4126 family protein	NA	NA	NA	NA
WP_041363123.1\|2396340_2397477_+	elongation factor P maturation arginine rhamnosyltransferase EarP	NA	NA	NA	NA
WP_013648234.1\|2397555_2398119_+	elongation factor P	NA	NA	NA	NA
WP_013648235.1\|2398169_2398730_-	NifU family protein	NA	NA	NA	NA
WP_013648236.1\|2398815_2399304_-	SUF system NifU family Fe-S cluster assembly protein	A0A0P0M6T0	Mycobacterium_phage	9.0e-13	33.3
WP_013648237.1\|2399303_2400563_-	cysteine desulfurase	Q2XUY6	environmental_halophage	2.8e-98	39.3
WP_013648238.1\|2400559_2401867_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_013648239.1\|2401863_2402658_-	Fe-S cluster assembly ATPase SufC	A0A2R8FG22	Brazilian_cedratvirus	9.2e-07	27.5
WP_013648240.1\|2402654_2404091_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_013648241.1\|2404220_2404556_-	iron-sulfur cluster assembly accessory protein	NA	NA	NA	NA
WP_013648242.1\|2404704_2405193_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
WP_150102759.1\|2405429_2406649_-\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	1.9e-96	60.4
WP_190274715.1\|2406637_2406967_+	hypothetical protein	NA	NA	NA	NA
WP_013647909.1\|2406959_2407781_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.2e-40	42.2
WP_013648244.1\|2408067_2408637_+	MEDS domain-containing protein	NA	NA	NA	NA
WP_013648245.1\|2408712_2409336_-	MazG-like family protein	A0A1V0DZA1	Acinetobacter_phage	2.3e-13	30.6
WP_013648246.1\|2409654_2409810_+	hypothetical protein	NA	NA	NA	NA
WP_150102797.1\|2409876_2410089_+	hypothetical protein	NA	NA	NA	NA
WP_013646905.1\|2410296_2411277_+\|transposase	transposase	NA	NA	NA	NA
WP_013648249.1\|2412372_2413446_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_190274716.1\|2413775_2413925_-	hypothetical protein	NA	NA	NA	NA
WP_150102759.1\|2414565_2415785_-\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	1.9e-96	60.4
WP_049782607.1\|2416262_2417030_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	4.9e-29	36.6
WP_013646345.1\|2417248_2418334_-\|transposase	IS110 family transposase	NA	NA	NA	NA
2418408:2418467	attL	NA	NA	NA	NA
WP_150102759.1\|2418446_2419666_-\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	1.9e-96	60.4
WP_013646343.1\|2420416_2421571_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	6.4e-41	37.6
WP_013648252.1\|2422298_2422607_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013648253.1\|2422597_2422912_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_013648254.1\|2422853_2423993_-\|integrase	tyrosine-type recombinase/integrase	A0A0D4DBR3	Acinetobacter_phage	1.5e-05	29.1
WP_013648255.1\|2424170_2424410_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_013648256.1\|2424406_2424826_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_013648257.1\|2426247_2427144_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA
WP_013648258.1\|2427151_2428399_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_013648259.1\|2428418_2429567_-	HD domain-containing protein	NA	NA	NA	NA
WP_013648260.1\|2429940_2430807_+	RIO-like kinase	NA	NA	NA	NA
WP_013648261.1\|2430921_2432739_-	recombinase family protein	R9TP69	Rhizobium_phage	2.7e-78	35.2
WP_013648262.1\|2433109_2433376_-	hypothetical protein	NA	NA	NA	NA
WP_013648263.1\|2433372_2433636_-	hypothetical protein	NA	NA	NA	NA
WP_013648264.1\|2433646_2434129_-	hypothetical protein	NA	NA	NA	NA
WP_013646905.1\|2434298_2435279_-\|transposase	transposase	NA	NA	NA	NA
WP_013648265.1\|2435317_2435473_-	hypothetical protein	NA	NA	NA	NA
WP_013646989.1\|2435876_2437031_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.3e-41	37.6
WP_013646184.1\|2437137_2438037_+\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	1.4e-96	60.4
WP_013648266.1\|2438078_2438471_+	conjugal transfer protein TraM	NA	NA	NA	NA
WP_013648267.1\|2438501_2438831_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013646379.1\|2439150_2439933_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	8.3e-77	57.0
2438017:2439001	attR	NA	NA	NA	NA
WP_013646380.1\|2439929_2440952_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.6e-67	41.3
WP_013648269.1\|2441858_2442281_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	6.4e-15	34.5

DBSCAN-SWA_11

2450514 : 2505427

Burkholderia_phage(10.53%)

transposase,capsid,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013646281.1\|2450514_2451408_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_013648277.1\|2451745_2453602_+	RNB domain-containing ribonuclease	NA	NA	NA	NA
WP_013648278.1\|2453748_2454636_+	energy transducer TonB	NA	NA	NA	NA
WP_013648279.1\|2454695_2455514_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_013648280.1\|2455721_2457161_+	magnesium transporter	NA	NA	NA	NA
WP_013648281.1\|2457256_2458513_-	glycosyl transferase	NA	NA	NA	NA
WP_013648282.1\|2458520_2460146_-	glycosyltransferase	NA	NA	NA	NA
WP_013648283.1\|2460138_2462127_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_013648284.1\|2462126_2463470_-	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	1.2e-11	25.4
WP_013648285.1\|2463459_2464287_-	ABC transporter permease	NA	NA	NA	NA
WP_013648287.1\|2464879_2465068_+\|transposase	transposase	NA	NA	NA	NA
WP_013648288.1\|2465187_2466489_-	MFS transporter	NA	NA	NA	NA
WP_013648289.1\|2466522_2467908_-	class II fumarate hydratase	NA	NA	NA	NA
WP_013648290.1\|2468357_2468690_-	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	2.9e-15	47.2
WP_013648291.1\|2468673_2468931_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	1.2e-19	56.5
WP_013648293.1\|2469257_2469614_-	hypothetical protein	NA	NA	NA	NA
WP_013648294.1\|2469617_2470208_-	hypothetical protein	NA	NA	NA	NA
WP_013648295.1\|2470298_2471444_-	ribonucleotide-diphosphate reductase subunit beta	A0A2D2W228	Stenotrophomonas_phage	1.0e-35	30.1
WP_013648296.1\|2471473_2474338_-	ribonucleoside-diphosphate reductase subunit alpha	A0A2H4P767	Pseudomonas_phage	3.8e-175	44.8
WP_013648297.1\|2474701_2475145_-	YaiI/YqxD family protein	NA	NA	NA	NA
WP_013648298.1\|2475165_2475759_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_013648299.1\|2475791_2477609_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_013648300.1\|2477614_2477803_-	4-oxalocrotonate tautomerase family protein	NA	NA	NA	NA
WP_013648301.1\|2477828_2478503_-	uracil-DNA glycosylase	NA	NA	NA	NA
WP_013648302.1\|2479344_2479938_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_013648303.1\|2479953_2480442_-	CDP-archaeol synthase	NA	NA	NA	NA
WP_013648304.1\|2480512_2481265_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_013648305.1\|2481267_2483682_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	6.3e-200	49.4
WP_013648306.1\|2483821_2485099_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.3e-135	55.9
WP_013648307.1\|2485163_2485805_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	4.0e-53	53.3
WP_013648308.1\|2485806_2487111_-	trigger factor	NA	NA	NA	NA
WP_013648309.1\|2487364_2488111_-	YciK family oxidoreductase	NA	NA	NA	NA
WP_013648310.1\|2488265_2489915_-	chaperonin GroEL	A0A219YK78	uncultured_virus	1.8e-177	62.0
WP_013648311.1\|2489968_2490259_-	co-chaperone GroES	A0A221S322	uncultured_virus	8.5e-19	47.9
WP_013648312.1\|2490607_2490907_+\|transposase	transposase	NA	NA	NA	NA
WP_013646989.1\|2490938_2492093_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.3e-41	37.6
WP_013648313.1\|2492134_2492998_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.1e-58	44.1
WP_150102800.1\|2493079_2493316_+	hypothetical protein	NA	NA	NA	NA
WP_013648314.1\|2493403_2494024_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	1.4e-23	38.0
WP_013648315.1\|2494020_2495412_+	DNA polymerase III subunit epsilon	A0A0A7RWA3	Clostridium_phage	6.8e-21	38.5
WP_013648316.1\|2495404_2496700_+	Y-family DNA polymerase	A0A2H4JBL5	uncultured_Caudovirales_phage	7.0e-97	44.1
WP_013648317.1\|2497015_2497432_-	hypothetical protein	NA	NA	NA	NA
WP_013648318.1\|2497434_2497740_-	hypothetical protein	NA	NA	NA	NA
WP_013647909.1\|2498285_2499107_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.2e-40	42.2
WP_013648087.1\|2499099_2500629_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	2.0e-10	24.6
WP_013646289.1\|2501018_2502602_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.9e-92	38.5
WP_013646288.1\|2502655_2503006_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.4e-13	35.3
WP_013646287.1\|2502993_2503290_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_013648319.1\|2503454_2503652_-	hypothetical protein	NA	NA	NA	NA
WP_013648320.1\|2503656_2504061_-	hypothetical protein	NA	NA	NA	NA
WP_190274717.1\|2504308_2505427_-\|capsid	phage major capsid protein	NA	NA	NA	NA

DBSCAN-SWA_12

2509334 : 2618910

104

Escherichia_phage(20.0%)

integrase,transposase,tRNA

attL 2507428:2507443|attR 2550009:2550024

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2507428:2507443	attL	NA	NA	NA	NA
WP_013648326.1\|2509334_2510591_-\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.8e-89	44.7
WP_013648327.1\|2511507_2512473_+	magnesium/cobalt transporter CorA	NA	NA	NA	NA
WP_013648328.1\|2512632_2513712_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_013648329.1\|2513716_2514172_-	NUDIX hydrolase	NA	NA	NA	NA
WP_013648330.1\|2515543_2515801_-	hypothetical protein	NA	NA	NA	NA
WP_013648331.1\|2515958_2516294_-	hypothetical protein	NA	NA	NA	NA
WP_013648332.1\|2516549_2516795_+	hypothetical protein	NA	NA	NA	NA
WP_150102872.1\|2517185_2517482_+	hypothetical protein	NA	NA	NA	NA
WP_013648334.1\|2517614_2521373_-	ATP-dependent RNA helicase HrpA	A0A1V0SBU4	Catovirus	3.7e-53	28.5
WP_013648335.1\|2521756_2521963_+	addiction module protein	NA	NA	NA	NA
WP_013648336.1\|2521962_2522259_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_013648337.1\|2522350_2524135_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_041362437.1\|2524374_2524797_-\|transposase	IS200/IS605 family transposase	G9CU69	Helicobacter_phage	2.0e-08	27.0
WP_013648339.1\|2526508_2527018_+	DUF4231 domain-containing protein	NA	NA	NA	NA
WP_013648340.1\|2527095_2527512_+	VOC family protein	NA	NA	NA	NA
WP_013648341.1\|2527498_2527813_+	TfoX/Sxy family protein	NA	NA	NA	NA
WP_013648342.1\|2527863_2528346_+	hypothetical protein	NA	NA	NA	NA
WP_013648344.1\|2528580_2528994_+	thermonuclease family protein	NA	NA	NA	NA
WP_013648345.1\|2529175_2529784_-	glutathione S-transferase	NA	NA	NA	NA
WP_013648346.1\|2529814_2530594_-	co-chaperone DjlA	NA	NA	NA	NA
WP_013648347.1\|2530677_2530923_-	BolA/IbaG family iron-sulfur metabolism protein	NA	NA	NA	NA
WP_013648348.1\|2530971_2531727_-	ABC transporter permease	NA	NA	NA	NA
WP_013648349.1\|2531723_2532641_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.6e-26	32.7
WP_041363151.1\|2532688_2533006_-	STAS domain-containing protein	NA	NA	NA	NA
WP_013648351.1\|2533041_2533662_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013648352.1\|2533882_2534350_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
WP_013648353.1\|2534349_2535147_-	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA
WP_013648354.1\|2535139_2535952_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.4e-20	29.4
WP_041362441.1\|2536306_2537143_+	thermonuclease family protein	NA	NA	NA	NA
WP_013648356.1\|2537207_2538515_-	M18 family aminopeptidase	NA	NA	NA	NA
WP_013648357.1\|2539028_2542559_+	calcium-binding protein	NA	NA	NA	NA
WP_150102873.1\|2542685_2543966_-	c-type cytochrome	NA	NA	NA	NA
WP_013648359.1\|2543980_2544691_-	cytochrome c	NA	NA	NA	NA
WP_013648360.1\|2545072_2546086_+	cation transporter	NA	NA	NA	NA
WP_013648361.1\|2546097_2548815_-	cation-transporting P-type ATPase	M1HM40	Paramecium_bursaria_Chlorella_virus	1.1e-67	28.0
WP_013648362.1\|2548939_2549452_+	phosphatase	NA	NA	NA	NA
WP_013648363.1\|2549522_2550005_+	hypothetical protein	NA	NA	NA	NA
WP_013648364.1\|2550193_2551024_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
2550009:2550024	attR	NA	NA	NA	NA
WP_013648365.1\|2551030_2552635_-	TIGR01244 family phosphatase	NA	NA	NA	NA
WP_013648366.1\|2552748_2553075_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013648367.1\|2553178_2553595_-	YeeE/YedE family protein	NA	NA	NA	NA
WP_013648368.1\|2553628_2554057_-	membrane protein	NA	NA	NA	NA
WP_013648369.1\|2554186_2555047_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_013648370.1\|2555134_2556145_-	molecular chaperone DnaJ	NA	NA	NA	NA
WP_013648371.1\|2556405_2556591_+	hemin uptake protein HemP	NA	NA	NA	NA
WP_013648372.1\|2556837_2557302_+	bacterioferritin	NA	NA	NA	NA
WP_013648373.1\|2557420_2558068_+	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_013648087.1\|2558214_2559744_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	2.0e-10	24.6
WP_013647909.1\|2559736_2560558_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.2e-40	42.2
WP_013648374.1\|2562013_2562451_-\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_013646795.1\|2562779_2563349_-	hypothetical protein	NA	NA	NA	NA
WP_013646794.1\|2563416_2564004_-	hypothetical protein	NA	NA	NA	NA
WP_013646793.1\|2564164_2565427_-	methane monooxygenase/ammonia monooxygenase subunit B	NA	NA	NA	NA
WP_013646792.1\|2565426_2566251_-	methane monooxygenase/ammonia monooxygenase subunit A	NA	NA	NA	NA
WP_013646791.1\|2566425_2567235_-	methane monooxygenase/ammonia monooxygenase subunit C	NA	NA	NA	NA
WP_150102802.1\|2567747_2568029_-\|transposase	transposase	E5E3P6	Burkholderia_phage	1.2e-17	53.6
WP_083810509.1\|2568076_2568550_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.4e-42	55.0
WP_083810510.1\|2568550_2568940_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.1e-05	31.5
WP_013646989.1\|2569028_2570183_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.3e-41	37.6
WP_083810562.1\|2570074_2570467_-\|transposase	transposase	NA	NA	NA	NA
WP_013648375.1\|2571284_2571671_-	response regulator	B5LWA6	Feldmannia_species_virus	3.3e-10	31.4
WP_013648376.1\|2571801_2573259_-	potassium transporter Trk	NA	NA	NA	NA
WP_013648377.1\|2573271_2574720_-	Trk system potassium transporter TrkA	NA	NA	NA	NA
WP_013648378.1\|2574729_2575518_-	inositol monophosphatase	NA	NA	NA	NA
WP_013648379.1\|2575517_2576078_-	thioredoxin family protein	NA	NA	NA	NA
WP_013648380.1\|2576246_2576993_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_041363156.1\|2577013_2578354_+	amino-acid N-acetyltransferase	NA	NA	NA	NA
WP_013648382.1\|2578456_2578729_+	oxidative damage protection protein	NA	NA	NA	NA
WP_013648383.1\|2578830_2580786_+	CRTAC1 family protein	NA	NA	NA	NA
WP_013648385.1\|2581179_2583621_+	ATP-binding protein	NA	NA	NA	NA
WP_013646281.1\|2583663_2584557_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_013648386.1\|2584815_2585982_-	hypothetical protein	NA	NA	NA	NA
WP_013648387.1\|2586604_2587768_-	hypothetical protein	NA	NA	NA	NA
WP_013648388.1\|2588275_2589001_-	glycosyltransferase	NA	NA	NA	NA
WP_013648389.1\|2589087_2589678_-	hypothetical protein	NA	NA	NA	NA
WP_013648390.1\|2589859_2591335_-	carbohydrate kinase	NA	NA	NA	NA
WP_013648391.1\|2591331_2592921_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_013648392.1\|2592917_2593658_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_013648393.1\|2593693_2594851_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_013648394.1\|2595094_2595841_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
WP_013648395.1\|2595915_2596716_+	ZIP family metal transporter	NA	NA	NA	NA
WP_013648396.1\|2596771_2597188_+	DUF4019 domain-containing protein	NA	NA	NA	NA
WP_013648397.1\|2597350_2598610_+	OFA family MFS transporter	NA	NA	NA	NA
WP_013648398.1\|2598682_2599429_+	hypothetical protein	NA	NA	NA	NA
WP_041362449.1\|2599510_2600227_+	hypothetical protein	NA	NA	NA	NA
WP_013648400.1\|2600281_2601133_-	hypothetical protein	NA	NA	NA	NA
WP_150102775.1\|2601122_2602342_-\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	2.5e-96	60.1
WP_013648402.1\|2602595_2602949_-	hypothetical protein	NA	NA	NA	NA
WP_013648403.1\|2603068_2604031_+\|transposase	transposase	NA	NA	NA	NA
WP_150102775.1\|2604573_2605792_+\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	2.5e-96	60.1
WP_041362451.1\|2605976_2607485_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_013648405.1\|2607716_2608355_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_013648406.1\|2608351_2609203_-	RIO-like kinase	NA	NA	NA	NA
WP_013648407.1\|2609461_2609947_-	VOC family protein	NA	NA	NA	NA
WP_150102803.1\|2610019_2610226_+	hypothetical protein	NA	NA	NA	NA
WP_013648409.1\|2610276_2610666_-	hypothetical protein	NA	NA	NA	NA
WP_150102804.1\|2610688_2610898_-	CopG family transcriptional regulator	NA	NA	NA	NA
WP_013648411.1\|2611302_2612907_+	ABC-F family ATPase	A0A2K9L3Z8	Tupanvirus	6.3e-55	26.6
WP_041363158.1\|2613514_2614477_+	PAS domain-containing protein	B5LWN0	Feldmannia_species_virus	8.8e-12	32.4
WP_013648412.1\|2614536_2614836_+\|transposase	transposase	NA	NA	NA	NA
WP_013646989.1\|2614867_2616022_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.3e-41	37.6
WP_041363160.1\|2616063_2616381_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_013646379.1\|2616440_2617223_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	8.3e-77	57.0
WP_083810509.1\|2618436_2618910_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.4e-42	55.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_015222

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection