CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NC_014837	Pantoea sp. At-9b, complete sequence	2 crisprs	DEDDh,cas3,DinG,csa3	0	7
NC_014841	Pantoea sp. At-9b plasmid pPAT9B04, complete sequence	0 crisprs	NA	0	0
NC_014842	Pantoea sp. At-9b plasmid pPAT9B05, complete sequence	0 crisprs	csa3	0	0
NC_014838	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	1 crisprs	NA	2	1
NC_014840	Pantoea sp. At-9b plasmid pPAT9B03, complete sequence	0 crisprs	csa3,WYL	0	0
NC_014839	Pantoea sp. At-9b plasmid pPAT9B02, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_014837_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014837_1

2000166-2000274

Orphan

Consensus_repeat	Method
GCGGGAGAGGGGACCGATCGAGCATATGGCACATCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014837_1

>merge|NC_014837|1|2000166-2000274|CRISPRCasFinder
GCGGGAGAGGGGACCGATCGAGCATATGGCACATCTTCCTCTCTCGCTTGCGGCACATCTCCCTCTCCCGCTTGCGGGAGAGGGGACCGATCGAGCATATAGCACATCT

>NC_014837|1|1|2000166-2000274|CRISPRCasFinder
GCGGGAGAGGGGACCGATCGAGCATATGGCACATCT	TCCTCTCTCGCTTGCGGCACATCTCCCTCTCCCGCTT
GCGGGAGAGGGGACCGATCGAGCATATAGCACATCT

Protein	Signature genes	Signature genes Name	Protein_function
NC_014837.1\|WP_013508975.1\|1998257_1999052_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NC_014837.1\|WP_013508985.1\|2008674_2009940_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236030
NC_014837.1\|WP_013508986.1\|2009943_2010798_-\|TauD/TfdA-family-dioxygenase	unknown	unknown	gnl\|CDD\|367137
NC_014837.1\|WP_013508973.1\|1996689_1997268_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223645
NC_014837.1\|WP_190274661.1\|2000327_2001083_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224049
NC_014837.1\|WP_013508983.1\|2005552_2006707_-\|mandelate-racemase	unknown	unknown	gnl\|CDD\|239445
NC_014837.1\|WP_013508970.1\|1995071_1995914_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NC_014837.1\|WP_013508968.1\|1993410_1993725_+\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NC_014837.1\|WP_013508969.1\|1993717_1995085_+\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|237262
NC_014837.1\|WP_013508981.1\|2002841_2003867_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NC_014837.1\|WP_190274647.1\|2006786_2006951_-\|hypothetical-protein	unknown	unknown	unknown
NC_014837.1\|WP_013508980.1\|2001939_2002845_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NC_014837.1\|WP_013508972.1\|1996255_1996693_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|182417
NC_014837.1\|WP_013508971.1\|1995976_1996246_+\|hypothetical-protein	unknown	unknown	unknown
NC_014837.1\|WP_013508977.1\|1999498_2000140_+\|RpiB/LacA/LacB-family-sugar-phosphate-isomerase	unknown	unknown	gnl\|CDD\|181746
NC_014837.1\|WP_013508976.1\|1999048_1999381_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380366
NC_014837.1\|WP_013508979.1\|2001101_2001968_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NC_014837.1\|WP_013508982.1\|2003863_2005492_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173877
NC_014837.1\|WP_013508984.1\|2007026_2008142_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238559
NC_014837.1\|WP_013508974.1\|1997234_1998098_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|370309

Protein	Function_ID	Function_description	E-value
NC_014837.1\|WP_013508975.1\|1998257_1999052_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.64585e-60
NC_014837.1\|WP_013508985.1\|2008674_2009940_-\|hypothetical-protein	gnl\|CDD\|236030	PRK07488, PRK07488, indoleacetamide hydrolase.	1.75477e-139
NC_014837.1\|WP_013508986.1\|2009943_2010798_-\|TauD/TfdA-family-dioxygenase	gnl\|CDD\|367137	pfam02668, TauD, Taurine catabolism dioxygenase TauD, TfdA family. This family consists of taurine catabolism dioxygenases of the TauD, TfdA family. TauD from E. coli is a alpha-ketoglutarate-dependent taurine dioxygenase. This enzyme catalyzes the oxygenolytic release of sulfite from taurine. TfdA from Burkholderia sp. is a 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase. TfdA from Alcaligenes eutrophus JMP134 is a 2,4-dichlorophenoxyacetate monooxygenase. Also included are gamma-Butyrobetaine hydroxylase enzymes EC:1.14.11.1.	2.46803e-80
NC_014837.1\|WP_013508973.1\|1996689_1997268_+\|hypothetical-protein	gnl\|CDD\|223645	COG0572, Udk, Uridine kinase [Nucleotide transport and metabolism].	3.21466e-05
NC_014837.1\|WP_190274661.1\|2000327_2001083_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224049	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	6.76437e-110
NC_014837.1\|WP_013508983.1\|2005552_2006707_-\|mandelate-racemase	gnl\|CDD\|239445	cd03329, MR_like_4, Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 4. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.	0
NC_014837.1\|WP_013508970.1\|1995071_1995914_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	2.97376e-120
NC_014837.1\|WP_013508979.1\|2001101_2001968_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.41025e-126
NC_014837.1\|WP_013508969.1\|1993717_1995085_+\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|237262	PRK12997, PRK12997, PTS sugar transporter subunit IIC.	1.28776e-169
NC_014837.1\|WP_013508981.1\|2002841_2003867_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.61804e-109
NC_014837.1\|WP_013508980.1\|2001939_2002845_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.8128e-104
NC_014837.1\|WP_013508972.1\|1996255_1996693_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|182417	PRK10372, PRK10372, PTS ascorbate transporter subunit IIA.	2.51054e-30
NC_014837.1\|WP_013508977.1\|1999498_2000140_+\|RpiB/LacA/LacB-family-sugar-phosphate-isomerase	gnl\|CDD\|181746	PRK09273, PRK09273, hypothetical protein; Provisional.	1.63809e-141
NC_014837.1\|WP_013508976.1\|1999048_1999381_-\|cupin-domain-containing-protein	gnl\|CDD\|380366	cd02238, cupin_KdgF, pectin degradation protein KdgF and related proteins, cupin domain. This family includes bacterial and archaeal pectin degradation protein KdgF that catalyzes the linearization of unsaturated uronates from both pectin and alginate, which are polysaccharides found in the cell walls of plants and brown algae, respectively, and represent an important source of carbon. These polysaccharides, mostly consisting of chains of uronates, can be metabolized by bacteria through a pathway of enzymatic steps to the key metabolite 2-keto-3-deoxygluconate (KDG). Pectin degradation is used by many plant-pathogenic bacteria during infection, and also, pectin and alginate can both represent abundant sources of carbohydrate for the production of biofuels. These proteins belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	1.81037e-51
NC_014837.1\|WP_013508982.1\|2003863_2005492_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173877	cd08512, PBP2_NikA_DppA_OppA_like_7, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.88508e-177
NC_014837.1\|WP_013508984.1\|2007026_2008142_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238559	cd01139, TroA_f, Periplasmic binding protein TroA_f. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	3.98527e-157
NC_014837.1\|WP_013508974.1\|1997234_1998098_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|370309	pfam09130, DUF1932, Domain of unknown function (DUF1932). This domain is found in a set of hypothetical prokaryotic proteins. Its exact function has not, as yet, been described.	2.97975e-15
NC_014837.1\|WP_013508968.1\|1993410_1993725_+\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	2.07648e-27

>NC_014837.1|WP_013508977.1|1999498_2000140_+|RpiB/LacA/LacB-family-sugar-phosphate-isomerase
MKIALMMENSQAAKNATVLTQLETVAQPLGHQVFNVGMSDEQDHHLTYIHLGIMASVLLNSNAVDFVVAGCGTGQGALMSLNIHPGVVCGYCIDPADAYLFAQINNGNALSLPFAKGFGWGAELNLRFIFEKAFTGEKGLGYPPERKEPQVRNAGILNQVKAAVVKEHYLDTLRAIDPELVKTALSGPRLQHCLFEHGQNDEIVRFVREVVAR
>NC_014837.1|WP_013508976.1|1999048_1999381_-|cupin-domain-containing-protein
MFIYRNATQVEDLGNGVTRRVLAHGGRMMAVEVSFATDAIGPLHHHPHEQLTYVLSGRFAFTINGVTKEVSAGDTLYKAPNVVHGCVCLEAGTLLDTFTPQREDFLAAGD
>NC_014837.1|WP_013508975.1|1998257_1999052_+|SDR-family-oxidoreductase
MKIDLHGKTALITASTGGIGFAIAQGLAESGAEVVLNGRSEASVSRAREKLNAAVVGAKIHTHIADLSSAQGVDTLLHGLPAIDILVNNAGIFGPKDFFATDDETWEAYWQTNVMSGVRLSRALLPAMVKKGWGRVVFISSESARNIPADMVHYGVSKTAQLSLARGLAKVVAGSGVTVNSVLPGPTMSDGFATMMADEVKRTGKSLETLGKEFVMSQRPSSVIQRAATVEEVANMVVYVCSTQASATSGAALRVDGGVVDDIV
>NC_014837.1|WP_013508974.1|1997234_1998098_-|NAD(P)-dependent-oxidoreductase
MKTLAFAAPGAMGAAVAAVLTQHGARVISPLSQRSADSQQRAQAAHIIDASEAALCDADIIFSILPPEFALSWAQQMAPHLQAATRKPLYVDCNAISPETLQQVAAVIEATGTPFVDGAIIGLPPGEQNPGGPRFWFSGPHASQLADLSELGLRVRIMQAENGAASALKMSYAGINKGIILLVSAMLINASRVGAAQALHEEMAESQPQILKRMKKAAPDMLPKAWRWAAEMDEIATLNQGELATDRLYQALGEVCRQLAADRKGDQQLSALLAAFFQPDADNARVD
>NC_014837.1|WP_013508973.1|1996689_1997268_+|hypothetical-protein
MTTPTEEKCVVLVNGIPASGKSTLARALAQQFGLPILTLDSLKEPFMASFAPVDRLRNRQLGCAAYQAIWKIVGQAPARCVWLIDAWFGFQPKAVLEEGLQQAGVTRVLELWMAITPDEVVARYQARLEQRMPGHPGAEYLPELRQLAERAQPMALGPVLQLDARAPDAAAAQAWLQRQLQRQSTRALSASG
>NC_014837.1|WP_013508972.1|1996255_1996693_+|PTS-sugar-transporter-subunit-IIA
MSIKQLLQEANAIQVGIASRDWREVISLAARPLVQGGYVNASYPEAVIANTLTHGAYYVFEEGIAIPHARPETGVLKDCFSLIVLAEPVSFDGSDKADIVIMFGARDSNAHIEEGIRAIVTMLEDEETLVRLRKASSVAEVIDIL
>NC_014837.1|WP_013508971.1|1995976_1996246_+|hypothetical-protein
MFGFRKKVPENNGQDQQEIDRQAESISEKISALEQQLANNPRAGDTQKQLMLEYNRALSLFAKSRRFRQEIDPLFVKIDELRNTIRKSI
>NC_014837.1|WP_013508970.1|1995071_1995914_+|class-II-fructose-bisphosphate-aldolase
MKLYNFTDLLQVAKQREFKALGSFNLHCLEMLPAYFKAAEKTNSPLMIQISTGTAKYLGHKLLVDAIRSLAESRNVPTCLHLDHCSDLDAIQTALDAGFSSVMYDGSHLPIEENISNTRKVIDMARPLHVSVEAELGAIGGSEDGKSVEMNETSFTTVDDAKRFVDETGVDMLAISIGTVHGLYTGKAHIQHQRLAAITEATHTPLVLHGGTGVSDEDMRLAVRSGIEKVNVGTEMNVQWVARCKQTFEKGKVNDSVRNFLVPANDAVTDVLVEKIQLFR
>NC_014837.1|WP_013508969.1|1993717_1995085_+|PTS-sugar-transporter-subunit-IIC
MNSVINFLVKDLLGQASILIAFIALVGLLLQKKSAGKVVEGTFKTLLGFLIMMAGINIIVGTLTFLNTIFTHGFGMQGYITDVAAIAGLANRELGSEVALTLLVIFIVNIIIARLTPFKYIFLTGQALLWMATIGAVIGYKAGLTGLPLILTGGIFGGVMAVVMPALAQPVVRRITDSDDVALGHFCTIGYLVTAAVAKVVGKGSRSTEDLKLPDNFKFLQDTYLSMAVVMVPMYLIPALAAGPAFIAQYSNGMNYLMYAFMQSIQFVCGVFVLYSGVRLLLNELVPAFRGIAMRIVPDAKPALDCPVMFPYAPNAVIVGFLATTLGSVVGMLVFPMFGLAMILPGLLTNFFAGGTAGVFGNALGGRRGAMIGGFVHGLFITLLPAILVPMLESYGFTGVTFSDSDVISTGLVLGHAFQNNWLFVALFIVFITLIAWFVNGKSTKPHEENIHETL
>NC_014837.1|WP_013508968.1|1993410_1993725_+|PTS-sugar-transporter-subunit-IIB
MLKILCVCGCGLGSSFAIEMSAKAVLKKLEIDADIDHTTISEANAFKSDMILTQKAFADVLNADASPEQMKRVIILNKLTDKAEIEQKIVAFMKEHNMKVASHE
>NC_014837.1|WP_190274661.1|2000327_2001083_-|ABC-transporter-ATP-binding-protein
MIGVQHLNLSFGEDEQRHQVLFDVNLAVREGEIFGLVGESGSGKTTVLKCLAGLFTHWQGELMIDGQALAHRITRPLCRKVQMVFQDPYGSLHPRHTLGDILEEPLHIHGIGQRQQRVVAMLEKVGLNRAWQTRYPHQLSGGQRQRVAIARALILEPRVLLLDEPTSALDVSVQAEILNLLSDLQQQEHLTYLMVTHDLGVVAHLCHRVAVMQHGKVLETLDVDALVAGQAAVPYTQMLVEASRHPEIAAV
>NC_014837.1|WP_013508979.1|2001101_2001968_-|ABC-transporter-ATP-binding-protein
MTSSIPVASKAQPLLDVDDLQVSFAHGRQLTPAVRGVSFQLGQEKLAIVGESGSGKSTVGRALLQLHPRSARITAQRMHFAGLDLLHATPAEMRAIRGKRISMIMQDPKYSLNPVVRIGEQIAEAWRSHHPGQRDEARQRALAMLEVVRIRDPERVYQLYPHEISGGQGQRVMIAMMLITDPELVIADEPTSALDISVRLQVLGLLDDLVKQRGLGLIFISHDINLVRHFCDRVLVMYAGRVVESLAAAELHQAQHPYTQGLLAALPDIDQRRPRLPVLQRQASWLQP
>NC_014837.1|WP_013508980.1|2001939_2002845_-|ABC-transporter-permease
MTISLDTPHTSAAQERLARCRRLARRSGQFLWRMACNPLTAIGGAIILLLLVTALFAPWIAPYHPLIQDLNNALSPPSAQHWFGTDEFGRDIFSRLVWGARITLYIVLLVSVTVGPLGLLLGVSAGYFGGKVDSVLMRVTDIFISFPSLVLALAFVAALGPGLEHVVIAITLTAWPPIARLARAEALSLRQADFISAVRLQGASPLRVLWKHIVPLCLPSVIIRITMNMAGIILTAAGLGFLGLGAQPPDPEWGAMIASGRSYMLECWWVVTVPGLAILVNSLAFNFLGDGLRDILDPRSE
>NC_014837.1|WP_013508981.1|2002841_2003867_-|ABC-transporter-permease
MKLTRSHWRRIRSRGLQVLITLMGLLLLTFFIGRVMPLDPVLAIVGPDADHATYQQVYHQLGFDKPLWVQFAIYLNGLLHGNLGMALLTGQPVVNDILRVFPATVELATLAIVIGTGLGVPLGVWAAARRNGVVDYMVRIISLAGYSTPIFWVGMVGLLLFYAHLGWVGGAGRVDFSLDGVVPRRTGLLLVDALLAGNGSVFASALNHLILPASLLGFHSLAYISRMTRSFMLAQLSQEFILTARVKGLTEWQVIWQHAFRNILVQLLTVVALAYGSLLEGAVLIETVFSWPGFGSYLTGSLMLGDMNAVMGCVLVVGLIFVLLNLVSDLLYQVFDPRTKV
>NC_014837.1|WP_013508982.1|2003863_2005492_-|ABC-transporter-substrate-binding-protein
MNLLLRCTACCIALLLAASPGLRAATPDDQLIVGMNMNNLLTLDPAAMTGNEVVGIVVNLYDGLVELDPRQLTHVRPALAERWEISPDHRQLTFHLRDNVTFHSGNPLSSADVVWSMRRVLHLNLAQASVWKSYGFSKDNVDQMITNPDARTVILRLPKANDPMLVLYSLAALGSMVVLDSKTVQAHASNGDWGNRWLTTHEAGSGPFRLDVWQAKDVLRMNRDPDYWRGAPKLSRVVFRHLQESQTLRLMMEKGDIDIASNMAIPDVKALRHDADLTVDAVPKGTIYYLAMSMKDRHFANAKVREAVRYLVDYQGINKSLLAGYGELHQRPIQAGMPATLPDPGYTLDIRRAKTLLAEAGYPDGFDTTLRVLADQPFLNIAIAIQSTLMQGGIRAKIITGTGNQIYGAMRERQFNLLVGRGGSGVEPHPHSSLRSLVYNPNNADSARLTNFQGWRTGFYDAQLNQMIDQALLERDSARQQQDYFAIQRRYDQLIPALMPISQMVDSVVVNNRVQDYVPHPSATTFLRDVWKTPDSLAGGTP
>NC_014837.1|WP_013508983.1|2005552_2006707_-|mandelate-racemase
MKISAIDVTLFSYPTRRVSDSAGHSHPGPESDAQLAMLTLTSEDGHCGYAFAPAEVVRPHVVNAFFRKVLLGQNAFDRERLWQELVHWQRGSAHQLTERALSAVEQALWDLIGRKLQLPVHKLLGGYREKIPAYGSTMCGDQLPGGLSTPDEYAQFAEQLVARGYRAIKLHTWMPPVSFAPSPTMDIKACAAVREAVGADIALMLDGYHWYSRSDALTIGKALEKLNFTWFEEPMEEESMASYAWLAENLSIDVLGPESLGGKHHSRADWVRAGACDILRAGANGVGGIAATLKVASLAEAFGMDCEVHGNGAASLAVVGAIRNCRWYERGLLHPFLDYEHPPAYLNSLVDPMDNDGFVHLPTRPGLGEDINFSWIETHTLNRW
>NC_014837.1|WP_190274647.1|2006786_2006951_-|hypothetical-protein
MKSLGDTFFYIQHAVSPLTKRPAFVKTLTTPHAIAQFIAAIYRILANALTKGER
>NC_014837.1|WP_013508984.1|2007026_2008142_+|ABC-transporter-substrate-binding-protein
MKNWMLALGLLTVACHASAKVITDVAGRQVEVAQESKRIILGEGRQMYLLAAFDTTAPFQRVVGWRDDFHKADYDGYMAYEKRYPQIKQLPTFGGAKDGTFNVEQALTLKPDLVLMNLESKAATDEGKLIEKLQAVGIPVVFIDFREKPMEHAEQSIRIMGELVNKPQRAEEIIAFRRAAIAKVTDRLKNFNGKRPKVMIDRAGGYTDECCMSFGNENFGQMVELAGGSNIAKDLIPGTFGTLNPEQIIASQPEVVVVTGANWKNYNTVGKWVGVGPGADTQEAEARLRTLMMRDAFKTLPVAHNGNAHAIWHQFYDSPYQFVAIQALAKWLHPALFADLDPDATFREFHEKFLPLPYQPGYWVTLPADKS
>NC_014837.1|WP_013508985.1|2008674_2009940_-|hypothetical-protein
MAQSGERLHRALLQAYKQRHLNSLSWLAAESALALAAAGSDAPLAGLPLVVKDNIDVAGMPTSIGTALLAEEPVSHSAELIVRLQQAGAIIIGKANMHELASGTSGLNAARGDVRHPFLPGRVVGGSSSGSAAAVAAGIVPASIGTDTGASVRLPASFCGLIGFRPSLLRYPQQGIAPISLSRDTAGILAQRMDDVLALDSAISGESDHPTVALADLRLGVPRAHFWHGCEPAVAAAAEAVLQQLRDRGVTLIEVEIAQVAQLAVQAGYPLASFEMLRDLPRYLQQRGSQYSFAELKQAVQSPDVQALLADAATVSMEQYHAAITHWKPLLTARYQAVFQQHQLDGLIFPTVPLLPPPPAKANTLFRQLIANCEPATVVGLPCISLPLAQTPDGIPVGIELQFAAGEDRRLLAVASVLLAR
>NC_014837.1|WP_013508986.1|2009943_2010798_-|TauD/TfdA-family-dioxygenase
MLELRPLTDHIGMEVLNVDATQPIDPATFTALRDALNTHSVLLLRNQPVTEAQHVAFAREFGELQVHVLSQYLTTPYPELYVLSNVKQDGKPIGNHKEGWNWHSDWSYYEVPCFGSVLHAVEVPPVGADTLFSSMFAAYDALDDDTKRLIQPLSAVHSYSTYYAKAFADREPLSAEQKAATPDVVHPLVRRHQETGRPSLFVGQDIVKEIVGLTPEESTALLARLNAHAISETFTYRHKWQAHDLLIWDNRCTMHQATPYDDVAYRRVMHRATVKGSERPQAMV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_014837_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014837_2

2616619-2616694

Orphan

Consensus_repeat	Method
CCCTCTCCCGCTAGCGGGAGAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014837_2

>merge|NC_014837|2|2616619-2616694|CRISPRCasFinder
CCCTCTCCCGCTAGCGGGAGAGGGAGGCAGTGCACCTGTGCTCGTATCAGTCCCCTCTCCCGCTGGCGGGAGAGGG

>NC_014837|2|2|2616619-2616694|CRISPRCasFinder
CCCTCTCCCGCTAGCGGGAGAGGG	AGGCAGTGCACCTGTGCTCGTATCAGTC
CCCTCTCCCGCTGGCGGGAGAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_014837.1\|WP_013509571.1\|2624044_2625448_+\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|236696
NC_014837.1\|WP_013509562.1\|2617228_2617429_+\|DUF2525-domain-containing-protein	unknown	unknown	gnl\|CDD\|313852
NC_014837.1\|WP_013509555.1\|2611294_2611690_+\|flagellar-biosynthetic-protein-FliO	unknown	unknown	gnl\|CDD\|183160
NC_014837.1\|WP_013509557.1\|2612431_2612701_+\|flagellar-biosynthesis-protein-FliQ	unknown	unknown	gnl\|CDD\|235567
NC_014837.1\|WP_013509572.1\|2625568_2627170_+\|Tar-ligand-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NC_014837.1\|WP_013509564.1\|2618621_2619842_+\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|237556
NC_014837.1\|WP_036625087.1\|2611689_2612421_+\|flagellar-type-III-secretion-system-pore-protein-FliP	unknown	unknown	gnl\|CDD\|237101
NC_014837.1\|WP_013509560.1\|2614903_2616598_+\|Tar-ligand-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|185008
NC_014837.1\|WP_013509566.1\|2621625_2621805_-\|DUF2158-domain-containing-protein	unknown	unknown	gnl\|CDD\|227762
NC_014837.1\|WP_013509565.1\|2619838_2621491_-\|cellulose-biosynthesis-regulator-YedQ	unknown	unknown	gnl\|CDD\|237964
NC_014837.1\|WP_013509558.1\|2612700_2613489_+\|flagellar-type-III-secretion-system-protein-FliR	unknown	unknown	gnl\|CDD\|235568
NC_014837.1\|WP_013509553.1\|2609881_2610889_+\|flagellar-motor-switch-protein-FliM	unknown	unknown	gnl\|CDD\|235849
NC_014837.1\|WP_013509563.1\|2617791_2618589_+\|mannosyl-3-phosphoglycerate-phosphatase-related-protein	unknown	unknown	gnl\|CDD\|179628
NC_014837.1\|WP_013509568.1\|2622166_2623069_-\|DUF808-domain-containing-protein	unknown	unknown	gnl\|CDD\|182217
NC_014837.1\|WP_013509554.1\|2610881_2611292_+\|flagellar-motor-switch-protein-FliN	unknown	unknown	gnl\|CDD\|181183
NC_014837.1\|WP_013509551.1\|2607975_2609262_+\|flagellar-hook-length-control-protein-FliK	unknown	unknown	gnl\|CDD\|236652
NC_014837.1\|WP_013509552.1\|2609391_2609877_+\|flagellar-basal-body-associated-protein-FliL	unknown	unknown	gnl\|CDD\|235909
NC_014837.1\|WP_013509570.1\|2623424_2623901_-\|DNA-mismatch-endonuclease-Vsr	unknown	unknown	gnl\|CDD\|226250
NC_014837.1\|WP_013509569.1\|2623082_2623355_-\|hypothetical-protein	unknown	unknown	unknown
NC_014837.1\|WP_013509559.1\|2614117_2614753_+\|transcriptional-regulator-RcsA	unknown	unknown	gnl\|CDD\|185309

Protein	Function_ID	Function_description	E-value
NC_014837.1\|WP_013509571.1\|2624044_2625448_+\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|236696	PRK10458, PRK10458, DNA cytosine methylase; Provisional.	0
NC_014837.1\|WP_013509562.1\|2617228_2617429_+\|DUF2525-domain-containing-protein	gnl\|CDD\|313852	pfam10733, DUF2525, Protein of unknown function (DUF2525). This family of proteins with unknown function appears to be restricted to Enterobacteriaceae. The family has a highly conserved sequence.	4.55195e-07
NC_014837.1\|WP_013509555.1\|2611294_2611690_+\|flagellar-biosynthetic-protein-FliO	gnl\|CDD\|183160	PRK11486, PRK11486, flagellar type III secretion system protein FliO.	7.5898e-37
NC_014837.1\|WP_013509557.1\|2612431_2612701_+\|flagellar-biosynthesis-protein-FliQ	gnl\|CDD\|235567	PRK05700, fliQ, flagellar type III secretion system protein FliQ.	2.04815e-34
NC_014837.1\|WP_013509572.1\|2625568_2627170_+\|Tar-ligand-binding-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	1.88093e-44
NC_014837.1\|WP_013509564.1\|2618621_2619842_+\|glycosyl-transferase	gnl\|CDD\|237556	PRK13915, PRK13915, putative glucosyl-3-phosphoglycerate synthase; Provisional.	1.92813e-19
NC_014837.1\|WP_036625087.1\|2611689_2612421_+\|flagellar-type-III-secretion-system-pore-protein-FliP	gnl\|CDD\|237101	PRK12430, PRK12430, putative bifunctional flagellar biosynthesis protein FliO/FliP; Provisional.	2.83368e-129
NC_014837.1\|WP_013509560.1\|2614903_2616598_+\|Tar-ligand-binding-domain-containing-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	3.31547e-136
NC_014837.1\|WP_013509566.1\|2621625_2621805_-\|DUF2158-domain-containing-protein	gnl\|CDD\|227762	COG5475, COG5475, Uncharacterized small protein [Function unknown].	7.15695e-20
NC_014837.1\|WP_013509565.1\|2619838_2621491_-\|cellulose-biosynthesis-regulator-YedQ	gnl\|CDD\|237964	PRK15426, PRK15426, cellulose biosynthesis regulator YedQ.	2.14286e-164
NC_014837.1\|WP_013509558.1\|2612700_2613489_+\|flagellar-type-III-secretion-system-protein-FliR	gnl\|CDD\|235568	PRK05701, fliR, flagellar type III secretion system protein FliR.	2.97603e-80
NC_014837.1\|WP_013509553.1\|2609881_2610889_+\|flagellar-motor-switch-protein-FliM	gnl\|CDD\|235849	PRK06666, fliM, flagellar motor switch protein FliM; Validated.	1.8864e-176
NC_014837.1\|WP_013509563.1\|2617791_2618589_+\|mannosyl-3-phosphoglycerate-phosphatase-related-protein	gnl\|CDD\|179628	PRK03669, PRK03669, mannosyl-3-phosphoglycerate phosphatase-related protein.	7.0357e-136
NC_014837.1\|WP_013509568.1\|2622166_2623069_-\|DUF808-domain-containing-protein	gnl\|CDD\|182217	PRK10062, PRK10062, hypothetical protein; Provisional.	0
NC_014837.1\|WP_013509554.1\|2610881_2611292_+\|flagellar-motor-switch-protein-FliN	gnl\|CDD\|181183	PRK07963, fliN, flagellar motor switch protein FliN; Validated.	1.26217e-81
NC_014837.1\|WP_013509551.1\|2607975_2609262_+\|flagellar-hook-length-control-protein-FliK	gnl\|CDD\|236652	PRK10118, PRK10118, flagellar hook length control protein FliK.	7.78317e-50
NC_014837.1\|WP_013509552.1\|2609391_2609877_+\|flagellar-basal-body-associated-protein-FliL	gnl\|CDD\|235909	PRK07021, fliL, flagellar basal body-associated protein FliL; Reviewed.	2.79221e-85
NC_014837.1\|WP_013509570.1\|2623424_2623901_-\|DNA-mismatch-endonuclease-Vsr	gnl\|CDD\|226250	COG3727, Vsr, DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair].	1.91138e-62
NC_014837.1\|WP_013509559.1\|2614117_2614753_+\|transcriptional-regulator-RcsA	gnl\|CDD\|185309	PRK15411, rcsA, transcriptional regulator RcsA.	1.64081e-131

>NC_014837.1|WP_013509560.1|2614903_2616598_+|Tar-ligand-binding-domain-containing-protein
MKTASIDEQNKLSIWQNLRLMPLFSMIFGGILLLFALCIGLASYFLIQSNNSLKDATDEIQIRMGISNSSNHLRTARLNVIQSGAAARIGEMDSYRADLARTEQRIEQARAGFKLYMDRKTKTAEDLALDAPLTERFNAYIDKGLKPMIDSAKQGSFEGIIAQETDVTRKLDDAYNAVLLKAITIRTNRADAINAEAAHQSRIGFIAMAVAFAAALVLVLLTFLFLRRVVINPLRQSVARIERIAQGDLTAPEQAWGRSEIGSLLHNLQLMQASLVRTVGVVREGAVAIYQGSSEISAGNTDLSSRTEQQASALEQTAASMEQLTATVKQNAENAHHASQLAADASGKARNGGEIVAGVVKTMNNISGSSKKIAEITNVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIESLIAESVDLISNGSHQVGAAGNTMSEIVEAVRRVTDIMSEIAAASDEQSRGIQQVSLAVTEMDNVTQQNASLVEEASSAAASLEDQAGRLTQAVAAFRLNDNPGLRVTPPAMQPALQTLTPRVATVSNDNWETF
>NC_014837.1|WP_013509559.1|2614117_2614753_+|transcriptional-regulator-RcsA
MPTIIMDSCNYTRLGLSDYMSAKGVKKKNITSVSDIEQLQQRCEQLKPGVVFINEECFIHESDSSDRIRGIIMQHPDTLFFIFMAISNIHFEEYLYVRKNLIITSKSIKTSTLDSLLGTYLQKKLNAAPRISAGLDIHPLTLSQTESNMLKMWMSGHDTIQISDKMQIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTSGIYVNVR
>NC_014837.1|WP_013509558.1|2612700_2613489_+|flagellar-type-III-secretion-system-protein-FliR
MINLDSSQLVHWVSQFFWPMVRLLALFASAPVLSEKSIPNRVKIGLAVLTTWILMPLLPPVETTLFTAAGFWLLLQQILIGVGLGLTMQFAFGAVRMAGEVIGLQMGLSFATFFDPGSRLNMPVLARILDMLAMLLFLTFNGHLWLISMLVDSFHTMPISDHPLNANAFMALVKAAGLIFLNGMMLALPLIVLLLTLNMALGLLNRVTPQLSVFVVGFPITLTVGILSLGLMMPLLAPFCEHLFSEVFDLLAQFMSELSHAG
>NC_014837.1|WP_013509557.1|2612431_2612701_+|flagellar-biosynthesis-protein-FliQ
MTPESVMVMGQDAMRVALLLAAPMLLVALVSGLIISLLQAATQVNEQTLSFIPKILAVAATAVIAGPWMLNLILDYMRTLFSNLPYIIG
>NC_014837.1|WP_036625087.1|2611689_2612421_+|flagellar-type-III-secretion-system-pore-protein-FliP
MRRLLPLLPLLLLAPVAHAQLPGLVSHPLANGGQSWSLPVQTLVFITSLTFIPAVLLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLVGLALFLTFFIMAPTFDKIYSDAYLPFSQDKISMDVAIDKGAQPLREFMLRQTREADLALFARLANTPPIEGPEAVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLVGSLAQSFYS
>NC_014837.1|WP_013509555.1|2611294_2611690_+|flagellar-biosynthetic-protein-FliO
MLKNAQTVQPASHSQPVVSAGSVIGQVSSVLAVIVLLILACGWLARRLGFAPKAVSGQALKVSASVQVGQRERVVIVDTHDARLVLGVTAQQITHLHSLPPLAPEDRVAQPAPQDFRQLLQTLVKRPGKPQ
>NC_014837.1|WP_013509554.1|2610881_2611292_+|flagellar-motor-switch-protein-FliN
MSDSKKPSDDDISADDLWAAAMNEQAATSAPEQSEAVFKSLDGSGASGSLQDIDLIMDIPVKLTVELGRTKMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVNDKYGVRITDIITPSERMRRLSR
>NC_014837.1|WP_013509553.1|2609881_2610889_+|flagellar-motor-switch-protein-FliM
MGDSILSQAEIDALLNGDSDSAEVEKSSTGGDGDIRPYDPNTQRRVVRERLQALEIINERFARHFRMALFNLLRRSPDISVGAIKIQPYHEFARNLPVPTNLNLIHLKPLRGTALVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVIRRMLKLALEGYSDAWKAIYPLDVEYVRSEMQVKFTNITTSPNDIVVNTPFQVEIGNLVGEFNICIPFSMIEPLRELLVNPPLENSRQEDNHWRDNLVKQVQHSELELIAHFADVSLRLSRILQLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRVEHLINPILNSLNEEQPNE
>NC_014837.1|WP_013509552.1|2609391_2609877_+|flagellar-basal-body-associated-protein-FliL
MSDNAKAKGRKRSILIPVLLIVTLAACSVAGYAVWRMMNKHEGDKPEVAKVEPPPAPVFFAMDTFTVNLVNPDNDPDRVLYVGFTLRLPDEDTRRRLNDYLPEVRSRLLLLLSRQSAAALATEQGKQALVDQIKQVLAPPLVKGQPPQVVSDVLFTAFILR
>NC_014837.1|WP_013509551.1|2607975_2609262_+|flagellar-hook-length-control-protein-FliK
MITLPTLVTQTASSGEADTSASTDILQGVENLPQDFVTALGNQLLTLAKQQGTGVQSADSSAESDEKSSKGVSLSALMEALDKPETLNALLQPENIKATLKSADDKDKSEASSLSASDLQNVQALFAMLPAAVEDRTTQTAATNVLSENTSDSRASLNNTLLSALTRQAKDEQPETTAATTPTATTAVTKKTSDIADALSAQTTTTQASSTTSTSATNSTALTLDESFQQVLSTLSKPDDKRDLSSTDTTTPVTSAPLSSSSTLTSSTASTSTTPSTPMLNAQLGTSEWQQALSQQIVMFSRNGQQNAELRLHPEDLGAIQISLTLDKDQAQLNMVSSHSHVRAALEAALPQLKTALAESGINLGQSNVSSDASAQGQNYQGQQEGRRDGQHGSFTLSQDSENEITPIAVPAALQARATGNGAVDIFA
>NC_014837.1|WP_013509562.1|2617228_2617429_+|DUF2525-domain-containing-protein
MMVTVNDDSDNLDNNIDTLLGAIQEKTSGKIKEHMQHADGSHDAPVDLTRAFEMDIHDCSCIEVHH
>NC_014837.1|WP_013509563.1|2617791_2618589_+|mannosyl-3-phosphoglycerate-phosphatase-related-protein
MVSLDQPLLIVTDLDGSLLDHHDYRWDAASAWLARLKQHQIPLVICSSKTAAEIIPLQKKLGIAGAPFIAENGARVVLEAEPMRREGPGQAYLTLCQQLQNLQPDFRFTGFHDFSDVEVAKFTGLTLTEASQSRQRDASEVILWRDDATRLDEFRAALHQQGLALTQGGRFWHVMPEGCGKGQALQMLQQHLAQRDGITRTTIGLGDGPNDVPMLELVDYAVVIKGFSKTPVILTRDDDNNVYHTAHVGPEGWREGLDYFLAQPD
>NC_014837.1|WP_013509564.1|2618621_2619842_+|glycosyl-transferase
MSDFYQNGVITNFHNLTHRSVESLEKEMVRFARKRKMGLILPSLFSELEGPALDNIVNELAKVPYLDEIVIGLDRADRDQFLFAREFFARLPQRHRILWNDGPRLKALDAELDKEGLSPSQPGKGRNVWFCTGYTLASDRTSCVALHDCDIVTYERSMLARLLYPLANPAFQYEFCKGFYARVAGGKLNGRVGRLLVGPLLRSLQKVYGHSEYLDYLASFRYPLSGEFAMRTHVLNNIKIPGDWGLEIGVLSEIYRNYTTRQSCQVEIADNYDHKHQPLAEEDGTGGLKRMSNDIVQSLLRKLATMGVPLTSDSFRVLKATYYRNALDMMEIYNHEATMNGLKFDQHIEEAAVEMFTQAILDAGQAFIERPNDKPFIPSWSRVQSAFPDILQRIYQAVEEDNDGKV
>NC_014837.1|WP_013509565.1|2619838_2621491_-|cellulose-biosynthesis-regulator-YedQ
MAQSPLPRQSGNPFLPVHLCFLAVFLFSAFLTVHEALELKTSYEDRQRAQLAEIQKNLDSQFQESVDELVYYQKMLSYALMHPLDSDNAREAVQRFQTLRQRPLWQLQLNSPRSMPLNGVGDAWLARDPLLKRDSALIDQEIRAALEFSFIMQFSDPDHDFHSRFWYISRAGFYISSRPPQSPQELEQSYATMVQRAYFRALDPQQNISPQLRWTSGYQGLFDEGLMLTLSAPIISNGYWYGVLSMDFPQARIRNLLAETRHTLLQGNLVFLDRKMNEVTRLHAPDEIPLNAEHRQELLNRMQHERSGILRLGTQFASWSKLTNVDGYIINVQTLKQGMKQELGRVTLFLLSMWLLFILMLAVAHQVIFRLVRRQDELSERLTWRANYDGLTRLLNRSAFFEQFVAQAAHCQQLQRPLSVIQLDVDHFKKVNDTWGHHAGDQALIRVASVISHTLRKYDVAGRIGGEEFCIVLPETTLAEASAVAERIRARLAAKTILVNASTTFNITLSAGVTSSEEQGDYDAESLQAKADSRLYLAKTNGRNRVCSAD
>NC_014837.1|WP_013509566.1|2621625_2621805_-|DUF2158-domain-containing-protein
MTFAISDEVQHKQGGPTMVVTGYASGMVECRWYDGYSVRREAFHSDELCHLSAAPQLAS
>NC_014837.1|WP_013509568.1|2622166_2623069_-|DUF808-domain-containing-protein
MAGTSLLTLLDDIATLLDDISVMGKVAAKKTAGVLGDDLSLNAQQVTGVKANRELPVVWAVAKGSFINKLILVPLALLISAFAPWLITPLLMLGGAYLCFEGVEKVLHSLNHDKAEQSPEARQQRLEQLAQQDPQKFEKDKVKGAVRTDFILSAEIVAITLGIVSAAPLLNQVIVLAGIAILVTVGVYGIVAGIVKIDDLGYWLREKSSTLAQAVGGGLLAAAPVLMKILSVVGTVAMFLVGGGIVIHGITPLHHAIAEYSGGFNPLVSALLSNGANLVLGFLIGSIVLLVVNLIAKVRG
>NC_014837.1|WP_013509569.1|2623082_2623355_-|hypothetical-protein
MSSIKLTVKRLYQLRDERMVNTRATARIYLGDTLIATEEITGMTESPVSKYLHTGDVAGQPLRVEWDCEGIADMSVTAIERCPCCQDHEP
>NC_014837.1|WP_013509570.1|2623424_2623901_-|DNA-mismatch-endonuclease-Vsr
MADVHSRDVRSKNMRAIRTQDTAIEQRIALILKDRGFGYRVQDKALAGRPDFVVPDQQAIIFVHGCFWHRHHCYLFNMPATRTEFWAGKINSNVERDRRYIQQLQESGWKVLIVWECALRGKLRLEDEALIERLEEWLLAASHSGEIDHAGLHHYRGV
>NC_014837.1|WP_013509571.1|2624044_2625448_+|DNA-(cytosine-5-)-methyltransferase
MHAEETAATASPSPLTVSATDDATMLLQQVLTIYAARDLVNTLSTAGGRDWSVPRLNRIRQGKSAAPALSSAEVASLQALLPSRPAHYDAPRFQFVDLFAGIGGIRRGFEQIGGQCVFTSEWNKEAVRTYKANHYCDPQQHRFNSDIRQVTQPAGLHDEQAIYQHIDRTIPDHQVLLAGFPCQPFSLAGVSKKNAMGRAHGFECEAQGTLFFDVARILAAKKPPFFVLENVKNLKSHDKGRTFAIIMATLDELGYDVADADNGALADAKIIDARHFLPQHRERIVLVGIRRDTRLSEGFTLRALAQLYPKKVPTLKSLLEPQPDAKYTLSPVLWNYLYQYAKKHKAKGNGFGFGLNDPRNPSVCVRTLSARYYKDGSEILIDRGWDSALGEQDFQQPDNMARRPRRLTPRECARLMGFEAPGETQFRIPVSDTQAYKQFGNSVVVPVFAAVAQLLLPLIEQYVRNNK
>NC_014837.1|WP_013509572.1|2625568_2627170_+|Tar-ligand-binding-domain-containing-protein
MSLLSVISLPARLCARLPLRIPLWLTSLRSQFLLFIALFCVLQSAGVWLLNSHVNQTQMSLQQANQLRERLALLDKARIELLTASDNSHGAGIYLMQDQQSGSVDSWKSLATAAQDSLNQAQQLFAQYHAAADSPLAQGFTLLAGGLQEQLKGLAANDINAFFMVPMQAFQQQFNDAWFHEIEQANHQLSDVNQSTLNTLKQSRNMSLGVSGLLIALLILAASLLMRGVLRPLRQANAQLEQIATGDLVIHHAPPRRQSLETHLLFQSIDTMRRGLQQIVSDINTVAISVAAGAENMQQHNEQVMQQHQAQNASFHHLSQRLHRVSEEVENGARFSQQATQEAQSADTLMRNCAREVDNMEHQMQQIVSASGDIAGIVDMLDNLSLQTRLLALNAAIESAHAGVYGRSFSVVAKEIGLLSQQSGQSTRQIDGLIQHTRQHVSDGFTKVKTLETLFAQISAAVSGVVQQLDDLQTNTAAQSHRVSTIAQEVVAMSEQLQQNETQNAQQVLAAGQLRELSDRLAQRAQQFRLEVA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1823184 : 1836456

Tupanvirus(11.11%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013508821.1\|1823184_1825113_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	2.8e-126	36.9
WP_013508822.1\|1825116_1825659_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	2.8e-15	31.9
WP_006118955.1\|1825760_1825958_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_007892678.1\|1826000_1826357_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_190274646.1\|1826414_1826522_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_013508823.1\|1826669_1827653_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	4.9e-34	42.6
WP_013508824.1\|1827667_1830055_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	9.2e-10	32.0
WP_007892687.1\|1830059_1830362_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	5.6e-13	40.0
WP_013508825.1\|1830555_1830912_+	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_013508826.1\|1831010_1831994_+	vitamin B12 ABC transporter permease BtuC	A0A2H4IY97	uncultured_Caudovirales_phage	7.9e-16	25.6
WP_013508827.1\|1832034_1832577_+	glutathione peroxidase	NA	NA	NA	NA
WP_041525770.1\|1832580_1833327_+	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	6.0e-08	29.9
WP_013508829.1\|1833401_1833860_+	C40 family peptidase	A0A217EQL1	Bacillus_phage	8.5e-13	36.7
WP_041525932.1\|1834174_1834918_+	EAL domain-containing protein	NA	NA	NA	NA
WP_013508831.1\|1835016_1836456_+	YdiU family protein	A0A075BSJ0	Microcystis_phage	2.8e-54	37.3

DBSCAN-SWA_2

2299143 : 2345484

Cronobacter_phage(48.15%)

head,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013509248.1\|2299143_2300190_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	2.1e-19	32.9
WP_013509249.1\|2300366_2301131_+	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	8.9e-07	23.3
WP_013509250.1\|2301127_2301718_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_013509251.1\|2301753_2302626_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_013509252.1\|2303436_2304093_+	hypothetical protein	NA	NA	NA	NA
WP_013509253.1\|2304093_2304714_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_013509254.1\|2304726_2305632_-	PHP domain-containing protein	NA	NA	NA	NA
WP_013509255.1\|2305894_2307457_+	anthranilate synthase component 1	NA	NA	NA	NA
WP_013509256.1\|2307456_2308038_+	glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	2.2e-29	35.4
WP_013509257.1\|2308051_2309050_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	4.1e-52	39.0
WP_013509258.1\|2309051_2310419_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.0e-37	40.4
WP_013509259.1\|2310464_2311655_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_013509260.1\|2311654_2312458_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_013509261.1\|2312502_2312943_-	hypothetical protein	NA	NA	NA	NA
WP_013509262.1\|2313144_2313459_+	BON domain-containing protein	NA	NA	NA	NA
WP_013509263.1\|2313663_2315337_+	lytic polysaccharide monooxygenase	A0A097P1Q9	Cydia_pomonella_granulosis_virus	2.5e-14	25.9
WP_150105784.1\|2315532_2315742_+	hypothetical protein	NA	NA	NA	NA
WP_013509265.1\|2315795_2316428_-	outer membrane protein OmpW	NA	NA	NA	NA
WP_013509266.1\|2316678_2317095_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_013509267.1\|2317122_2317857_+	UPF0259 family protein	NA	NA	NA	NA
WP_013509268.1\|2317907_2318447_+	septation protein A	NA	NA	NA	NA
WP_041525794.1\|2318513_2318930_+	acyl-CoA thioester hydrolase YciA	NA	NA	NA	NA
WP_190274630.1\|2318963_2319707_-	TonB system transport protein TonB	NA	NA	NA	NA
WP_013509271.1\|2319911_2320208_+	YciI family protein	NA	NA	NA	NA
WP_013509273.1\|2321586_2321790_-	hypothetical protein	NA	NA	NA	NA
WP_013509274.1\|2321966_2323238_-\|tail	tail fiber domain-containing protein	H6WRW6	Salmonella_phage	4.7e-61	39.7
WP_013509275.1\|2323310_2324036_-	hypothetical protein	NA	NA	NA	NA
WP_041525795.1\|2324035_2324311_-	hypothetical protein	NA	NA	NA	NA
WP_013509276.1\|2324310_2327379_-	host specificity protein J	I6R9B3	Salmonella_phage	0.0e+00	66.3
WP_013509277.1\|2327442_2327967_-\|tail	tail assembly protein	H6WRW3	Salmonella_phage	1.2e-42	57.5
WP_013509278.1\|2327909_2328638_-	C40 family peptidase	A0A1V0E5M9	Salmonella_phage	6.3e-95	65.8
WP_013509279.1\|2328634_2329339_-\|tail	phage minor tail protein L	H6WRW1	Salmonella_phage	5.3e-99	73.1
WP_013509280.1\|2329335_2329689_-\|tail	phage tail protein	A0A1V0E5N3	Salmonella_phage	2.0e-46	76.1
WP_013509281.1\|2329745_2329958_-	hypothetical protein	NA	NA	NA	NA
WP_150105785.1\|2329994_2333054_-\|tail	phage tail length tape measure family protein	F1C5E9	Cronobacter_phage	4.7e-99	42.6
WP_150105786.1\|2333069_2333807_-	hypothetical protein	NA	NA	NA	NA
WP_013509284.1\|2333874_2334603_-	hypothetical protein	G0ZNE7	Cronobacter_phage	8.6e-60	50.0
WP_013509285.1\|2334653_2335397_-	Ig domain-containing protein	F1C5E5	Cronobacter_phage	8.7e-76	87.6
WP_013509286.1\|2335421_2335805_-	hypothetical protein	F1C5E4	Cronobacter_phage	2.7e-52	74.0
WP_013509287.1\|2335801_2336242_-	HK97 gp10 family phage protein	A0A2P1MXA4	Escherichia_phage	1.2e-32	50.0
WP_013509288.1\|2336244_2336592_-	hypothetical protein	G0ZNE2	Cronobacter_phage	1.4e-39	69.6
WP_013509289.1\|2336760_2337138_-	hypothetical protein	A0A0M3LQS8	Mannheimia_phage	1.4e-21	47.2
WP_013509290.1\|2337140_2337509_-	hypothetical protein	NA	NA	NA	NA
WP_013509291.1\|2337518_2338598_-	hypothetical protein	F1C5E1	Cronobacter_phage	2.4e-151	72.6
WP_013509292.1\|2338609_2339044_-	hypothetical protein	F1C5E0	Cronobacter_phage	2.0e-43	63.9
WP_013509293.1\|2339047_2340457_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	8.6e-141	60.8
WP_083810328.1\|2340493_2341408_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	4.2e-104	63.6
WP_013509295.1\|2341439_2342897_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	2.5e-191	72.9
WP_013509296.1\|2342906_2344370_-	hypothetical protein	G0ZND4	Cronobacter_phage	9.0e-250	86.4
WP_013509297.1\|2344356_2344836_-	DUF2280 domain-containing protein	F1C5D6	Cronobacter_phage	5.9e-57	66.7
WP_041525954.1\|2344866_2345484_-	hypothetical protein	F1C5D5	Cronobacter_phage	2.5e-84	70.0

DBSCAN-SWA_3

2349944 : 2369929

Escherichia_phage(29.41%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013509306.1\|2349944_2350574_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	5.5e-87	74.2
WP_013509307.1\|2350577_2350916_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.3e-31	60.6
WP_013509309.1\|2353011_2353851_-	antitermination protein	M9NZB0	Enterobacteria_phage	3.5e-81	56.7
WP_041525956.1\|2353884_2354241_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	2.7e-43	67.8
WP_013509311.1\|2354240_2355626_-	replicative DNA helicase	K7P852	Enterobacteria_phage	1.8e-119	52.8
WP_013509312.1\|2355618_2356683_-	replication protein	A0A2H4J2W5	uncultured_Caudovirales_phage	1.0e-53	84.8
WP_041525800.1\|2356895_2357081_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_013509314.1\|2357073_2357397_-	hypothetical protein	NA	NA	NA	NA
WP_013509315.1\|2357459_2357699_-	helix-turn-helix transcriptional regulator	A0A0U2S629	Escherichia_phage	8.3e-12	48.6
WP_013509316.1\|2357803_2358529_+	LexA family transcriptional regulator	A0A2R2X2B0	Escherichia_phage	2.3e-57	47.5
WP_013509317.1\|2358548_2358761_+	DUF2116 family Zn-ribbon domain-containing protein	A0A1P8DTH3	Proteus_phage	4.8e-11	48.4
WP_150105787.1\|2358897_2358996_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_041525801.1\|2359257_2359461_+	hypothetical protein	NA	NA	NA	NA
WP_013509318.1\|2359691_2359901_-	hypothetical protein	G8C7T7	Escherichia_phage	2.0e-06	45.3
WP_013509319.1\|2360902_2361307_+	hypothetical protein	NA	NA	NA	NA
WP_013509320.1\|2361428_2361638_+	hypothetical protein	NA	NA	NA	NA
WP_013509321.1\|2361606_2362275_+	exodeoxyribonuclease X	A0A1W5PTR6	Pseudoalteromonas_phage	3.5e-23	34.3
WP_013509322.1\|2362276_2362942_+	ATP-binding protein	G9L667	Escherichia_phage	4.4e-71	60.8
WP_013509323.1\|2362941_2363640_+	hypothetical protein	A0A088C400	Shewanella_sp._phage	5.1e-25	40.2
WP_013509324.1\|2363710_2364250_+	hypothetical protein	A0A2D1GNL9	Pseudomonas_phage	1.1e-54	64.9
WP_013509325.1\|2364242_2364461_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013509326.1\|2364572_2364848_+	hypothetical protein	NA	NA	NA	NA
WP_013509327.1\|2364941_2365184_+	DNA polymerase III subunit theta	A0A2H4J4A9	uncultured_Caudovirales_phage	3.4e-29	81.2
WP_013509330.1\|2366027_2366513_+	hypothetical protein	NA	NA	NA	NA
WP_013509331.1\|2366642_2367251_-	hypothetical protein	NA	NA	NA	NA
WP_013509332.1\|2367302_2368178_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	1.3e-89	54.0
WP_013509333.1\|2368174_2369929_+	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	9.2e-217	57.9

DBSCAN-SWA_4

2469751 : 2479265

Erwinia_phage(37.5%)

portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041525958.1\|2469751_2470594_-	phage repressor protein CI	Q6K1G0	Salmonella_virus	1.5e-84	54.1
WP_013509427.1\|2470708_2471110_+	hypothetical protein	NA	NA	NA	NA
WP_013509428.1\|2471141_2471651_+	phage regulatory CII family protein	F1BUS6	Erwinia_phage	6.2e-65	73.4
WP_071883902.1\|2471660_2471849_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.5e-08	50.9
WP_013509429.1\|2471812_2472154_+	DUF5347 domain-containing protein	A0A1S6L019	Salmonella_phage	5.9e-27	52.2
WP_013509430.1\|2472221_2472452_+	DUF2732 family protein	NA	NA	NA	NA
WP_013509431.1\|2472451_2472676_+	TraR/DksA family transcriptional regulator	F1BUS2	Erwinia_phage	3.0e-16	56.9
WP_013509432.1\|2474676_2475627_-	restriction endonuclease subunit S	A0A1W6JNN3	Staphylococcus_phage	4.3e-11	28.0
WP_013509433.1\|2475623_2477522_-	N-6 DNA methylase	A0A1W6JNK1	Staphylococcus_phage	1.9e-74	32.6
WP_013509434.1\|2478224_2479265_-\|portal	phage portal protein	F1BUR7	Erwinia_phage	3.0e-175	84.4

DBSCAN-SWA_5

2816291 : 2822113

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013509735.1\|2816291_2816840_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-52	55.9
WP_013509736.1\|2816839_2817721_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	7.6e-103	61.7
WP_013509737.1\|2817761_2818649_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	1.6e-28	34.6
WP_013509738.1\|2818648_2819728_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.4e-98	51.9
WP_013509739.1\|2820155_2821169_-	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	1.4e-76	43.7
WP_013509740.1\|2821216_2822113_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.3e-44	41.3

DBSCAN-SWA_6

3178782 : 3188181

Ralstonia_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013510049.1\|3178782_3180066_-	uracil permease	Q9KX94	Enterobacteria_phage	2.4e-65	36.7
WP_013510050.1\|3180137_3180764_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_013510051.1\|3181005_3182046_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	1.6e-70	42.7
WP_013510052.1\|3182042_3182681_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.1e-29	42.5
WP_150105823.1\|3183579_3184281_-	hypothetical protein	A0A077K9W3	Ralstonia_phage	4.0e-06	27.2
WP_150105824.1\|3184392_3185139_-	hypothetical protein	A0A077K9W3	Ralstonia_phage	1.3e-05	24.8
WP_013510055.1\|3185141_3187286_-	DUF3274 domain-containing protein	A0A077K801	Ralstonia_phage	2.7e-29	25.3
WP_013510056.1\|3187413_3188181_-	phosphate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.8e-15	31.6

DBSCAN-SWA_7

3697731 : 3802173

109

Salmonella_phage(50.98%)

lysis,tRNA,tail,capsid,portal,head,terminase,integrase,coat,plate

attL 3767164:3767179|attR 3785930:3785945

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013510501.1\|3697731_3698709_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_013510502.1\|3698758_3700075_-	MFS transporter	Q6JIH2	Burkholderia_virus	4.8e-61	34.5
WP_013510503.1\|3700318_3700741_-	TonB system transport protein ExbD	NA	NA	NA	NA
WP_190274670.1\|3700746_3701472_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
WP_013510505.1\|3701816_3702794_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_013510506.1\|3702840_3703347_+	TRAP transporter small permease	NA	NA	NA	NA
WP_013510507.1\|3703362_3704649_+	TRAP transporter large permease	NA	NA	NA	NA
WP_013510508.1\|3704846_3706037_+	cystathionine beta-lyase	NA	NA	NA	NA
WP_013510509.1\|3706143_3706806_+	DedA family protein	NA	NA	NA	NA
WP_013510510.1\|3706800_3707727_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_013510511.1\|3707931_3708759_+	2,5-didehydrogluconate reductase DkgA	A0A2H4PQR8	Staphylococcus_phage	1.3e-59	43.6
WP_013510512.1\|3708927_3710358_-	cell division protein FtsP	NA	NA	NA	NA
WP_013510513.1\|3710479_3711217_-	1-acylglycerol-3-phosphate O-acyltransferase	NA	NA	NA	NA
WP_013510514.1\|3711266_3713537_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	3.0e-82	34.4
WP_013510515.1\|3713948_3715508_+	transcription antiterminator	NA	NA	NA	NA
WP_013510516.1\|3715526_3715997_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_013510517.1\|3716019_3716334_+	PTS fructose transporter subunit IIB	NA	NA	NA	NA
WP_013510518.1\|3716345_3717437_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA
WP_013510519.1\|3717446_3718298_+	class II fructose-bisphosphate aldolase family protein	NA	NA	NA	NA
WP_013510520.1\|3718431_3719295_+	ketose-bisphosphate aldolase	NA	NA	NA	NA
WP_013510521.1\|3719360_3720128_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_013510522.1\|3720281_3720863_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_013510523.1\|3720894_3721206_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_013510524.1\|3721302_3722202_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_013510525.1\|3722257_3724153_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	3.4e-92	34.8
WP_013510526.1\|3724200_3724782_-	esterase YqiA	NA	NA	NA	NA
WP_013510527.1\|3724785_3725613_-	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA
WP_013510528.1\|3725656_3726082_-	DUF1249 family protein	NA	NA	NA	NA
WP_013510529.1\|3726078_3726714_-	ADP-ribose diphosphatase	NA	NA	NA	NA
WP_013510530.1\|3726927_3728400_+	outer membrane channel protein TolC	NA	NA	NA	NA
WP_013510531.1\|3728542_3729202_+	DUF1190 family protein	A0A173GEW8	Erwinia_phage	5.4e-45	50.0
WP_013510532.1\|3729210_3730374_+	glutathionylspermidine synthase family protein	B2ZXR7	Ralstonia_phage	5.4e-88	44.0
WP_013510533.1\|3730416_3731202_-	4,5-DOPA dioxygenase extradiol	NA	NA	NA	NA
WP_013510534.1\|3731357_3732014_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	3.2e-45	44.9
WP_013510535.1\|3732443_3732728_+	accessory factor UbiK family protein	NA	NA	NA	NA
WP_013510536.1\|3732768_3734193_-	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	A0A1B1IUK5	uncultured_Mediterranean_phage	1.3e-35	28.6
WP_013510537.1\|3734247_3737106_-	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA
WP_013510538.1\|3737137_3738448_-	inorganic triphosphatase	NA	NA	NA	NA
WP_013510539.1\|3738650_3739271_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_013510540.1\|3739407_3740640_+	multifunctional CCA addition/repair protein	A0A1V0E714	Klebsiella_phage	1.4e-83	45.3
WP_013510541.1\|3740657_3741476_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_013510542.1\|3741666_3742026_-	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA
WP_013510543.1\|3742132_3742741_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_013510544.1\|3742768_3743782_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.6e-107	58.6
WP_001144069.1\|3744063_3744279_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_013510545.1\|3744397_3746143_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.9e-74	39.5
WP_013510546.1\|3746388_3748233_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	31.5
WP_013510547.1\|3748281_3748794_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_013510548.1\|3748790_3749378_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_013510549.1\|3749514_3750306_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_013510550.1\|3750752_3751235_+	hypothetical protein	Q19UP0	Mannheimia_phage	1.4e-13	30.7
WP_013510551.1\|3751594_3752848_-	YcaO-like family protein	NA	NA	NA	NA
WP_013510552.1\|3752890_3753097_-	hypothetical protein	NA	NA	NA	NA
WP_013510553.1\|3753588_3753807_-	ogr/Delta-like zinc finger family protein	Q37973	Salmonella_virus	7.3e-23	68.1
WP_013510554.1\|3753871_3754969_-	phage late control D family protein	E5G6Q3	Salmonella_phage	6.1e-150	74.7
WP_013510555.1\|3754965_3755451_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.4e-58	71.2
WP_013510556.1\|3755447_3758222_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	3.7e-135	48.3
WP_013510557.1\|3758214_3758337_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	4.6e-11	74.4
WP_013510558.1\|3758351_3758654_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.7e-30	69.0
WP_013510559.1\|3758708_3759224_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	3.9e-83	88.3
WP_013510560.1\|3759236_3760406_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.0e-195	87.4
WP_013510561.1\|3760562_3760769_-	hypothetical protein	NA	NA	NA	NA
WP_013510562.1\|3760768_3762268_-\|tail	phage tail protein	F1BUP1	Erwinia_phage	7.1e-117	78.3
WP_013510563.1\|3762264_3762879_-\|tail	phage tail protein I	E5G6N9	Salmonella_phage	5.5e-92	78.5
WP_013510564.1\|3762875_3763790_-\|plate	baseplate J/gp47 family protein	A0A1S6KZY6	Salmonella_phage	2.1e-103	66.6
WP_013510565.1\|3763776_3764136_-	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	1.5e-41	68.9
WP_013510566.1\|3764132_3764711_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.3e-71	68.6
WP_013510567.1\|3764805_3765540_+	hypothetical protein	NA	NA	NA	NA
WP_013510568.1\|3765562_3766006_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	7.1e-41	60.3
WP_013510569.1\|3765998_3766430_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	7.9e-53	72.7
WP_041526002.1\|3766525_3766951_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	8.3e-39	63.1
WP_013510571.1\|3766950_3767466_-	lysozyme	E5G6N1	Salmonella_phage	1.1e-72	79.2
3767164:3767179	attL	NA	NA	NA	NA
WP_013510572.1\|3767446_3767659_-	hypothetical protein	E5G6N0	Salmonella_phage	2.4e-18	64.7
WP_013510573.1\|3767662_3767866_-\|tail	tail protein X	E5G6M9	Salmonella_phage	9.1e-28	80.6
WP_013510574.1\|3767865_3768330_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	6.5e-61	72.1
WP_013510575.1\|3768429_3769080_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	4.0e-85	73.6
WP_013510576.1\|3769082_3770144_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	7.9e-147	73.5
WP_013510577.1\|3770190_3771024_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	9.4e-103	71.5
WP_013510578.1\|3771174_3772941_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	89.3
WP_013510579.1\|3772941_3773973_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	9.0e-172	85.1
WP_013510580.1\|3773984_3774935_+	HNH endonuclease	A0A1S6KZY3	Salmonella_phage	4.9e-71	45.5
WP_013510581.1\|3774983_3775778_-	putative phage abortive infection protein	NA	NA	NA	NA
WP_013510582.1\|3775808_3776180_-	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	4.9e-27	49.2
WP_071883911.1\|3776157_3776739_-	hypothetical protein	NA	NA	NA	NA
WP_041526004.1\|3776742_3777210_-	hypothetical protein	Q6SE88	Lactobacillus_prophage	8.9e-26	44.2
WP_013510583.1\|3777473_3777662_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.3e-17	71.2
WP_013510584.1\|3777764_3779774_-	replication endonuclease	F1BUM9	Cronobacter_phage	4.0e-248	65.2
WP_013510585.1\|3779766_3780084_-	DUF5405 family protein	NA	NA	NA	NA
WP_013510586.1\|3780080_3780308_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	1.2e-15	56.5
WP_013510587.1\|3780307_3780535_-	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	1.1e-13	58.7
WP_013510588.1\|3780604_3780943_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.0e-32	61.6
WP_071883913.1\|3780906_3781098_-	DUF2724 domain-containing protein	Q6K1F7	Salmonella_virus	6.0e-13	58.3
WP_013510589.1\|3781101_3781611_-	phage regulatory CII family protein	F1BUS6	Erwinia_phage	3.9e-59	68.5
WP_013510590.1\|3781645_3781882_-	hypothetical protein	NA	NA	NA	NA
WP_013510591.1\|3781971_3782577_+	phage repressor protein CI	A0A218M4J1	Erwinia_phage	5.9e-30	32.0
WP_013510592.1\|3782585_3783617_+\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	2.3e-119	62.8
WP_013510593.1\|3783724_3784483_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_013510594.1\|3785431_3786475_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
3785930:3785945	attR	NA	NA	NA	NA
WP_013510595.1\|3786512_3786953_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_013510596.1\|3786949_3787486_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_013510597.1\|3787463_3788534_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_013510598.1\|3788497_3790252_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_013510599.1\|3790282_3791860_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_013510600.1\|3791880_3795237_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_013510601.1\|3795291_3797937_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.3e-92	32.9
WP_013510602.1\|3798066_3798567_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_013510603.1\|3798572_3800159_-	OmpA family protein	NA	NA	NA	NA
WP_013510604.1\|3800155_3800836_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_013510605.1\|3800832_3802173_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_014838

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_014838_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014838_1

42449-42560

Orphan

Consensus_repeat	Method
GACAACGTTCACTGTAATCAGTAAC	PILER-CR

2 spacers

The CRISPR arrays of NC_014838_1

>merge|NC_014838|1|42449-42560|PILER-CR
AACATTCACTGTAATCAGTTAATGAGGGAACCAGGGGATACCGCCAACGTTCACTGTAATCAGTACCCAACCGATAACCAGACGAAAGATAACGTTCACTGTATTCAGTAAC

>NC_014838|1|1|42449-42560|PILER-CR
AACATTCACTGTAATCAGTTAATGA	GGGAACCAGGGGATACCGCCAAC
GTTCACTGTAATCAGTACCCAACCG	ATAACCAGACGAAAGATAAC
GTTCACTGTATTCAGTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014838.1\|WP_013511167.1\|54931_55753_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NC_014838.1\|WP_013511148.1\|30089_30965_-\|metal-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270318
NC_014838.1\|WP_013511147.1\|28479_29913_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NC_014838.1\|WP_013511156.1\|40385_41585_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|376033
NC_014838.1\|WP_013511166.1\|53786_54932_+\|FAD-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|181262
NC_014838.1\|WP_190274681.1\|51309_51834_-\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NC_014838.1\|WP_013511158.1\|43366_44296_-\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	unknown
NC_014838.1\|WP_013511164.1\|51881_52343_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NC_014838.1\|WP_013511149.1\|30961_31660_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NC_014838.1\|WP_041526070.1\|34140_35547_-\|FAD/NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|226906
NC_014838.1\|WP_013511159.1\|44772_46149_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|184426
NC_014838.1\|WP_013511153.1\|35576_36749_-\|FMNH2-dependent-alkanesulfonate-monooxygenase	unknown	unknown	gnl\|CDD\|234821
NC_014838.1\|WP_013511150.1\|31656_32676_-\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NC_014838.1\|WP_013511162.1\|47746_51313_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224446
NC_014838.1\|WP_013511151.1\|32672_34064_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274819
NC_014838.1\|WP_013511161.1\|46760_47732_-\|XdhC-family-protein	unknown	unknown	gnl\|CDD\|224886
NC_014838.1\|WP_013511165.1\|52420_53473_-\|2,5-dihydroxypyridine-5,6-dioxygenase	unknown	unknown	unknown
NC_014838.1\|WP_150105831.1\|46204_46777_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133025
NC_014838.1\|WP_013511154.1\|37023_38958_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NC_014838.1\|WP_013511155.1\|39406_40378_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|370113

Protein	Function_ID	Function_description	E-value
NC_014838.1\|WP_013511167.1\|54931_55753_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.39386e-25
NC_014838.1\|WP_013511148.1\|30089_30965_-\|metal-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270318	cd13600, PBP2_lipoprotein_like_1, Putative periplasmic-binding component of ABC-type methionine uptake transporter system-like; the type 2 periplasmic binding protein fold. This subgroup shares significant sequence homology with the periplasmic substrate-binding domain of ATP-binding cassette (ABC) transporter involved in uptake of methionine (MetQ). The members of the MetQ-like family include the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum, the membrane-associated lipoprotein-9 GmpC from Staphylococcus aureus, and Toll-like receptor 2-activating lipoprotein IlpA from Vibrio vulnificus. They all function as a receptor for methionine. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea.	4.87637e-106
NC_014838.1\|WP_013511147.1\|28479_29913_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.47741e-34
NC_014838.1\|WP_013511156.1\|40385_41585_-\|AAA-family-ATPase	gnl\|CDD\|376033	pfam18607, HTH_54, ParA helix turn helix domain. The accurate segregation of DNA is essential for the faithful inheritance of genetic information. Segregation of the prototypical P1 plasmid par system requires two proteins, ParA and ParB, and a centromere. When bound to ATP, ParA mediates segregation by interacting with centromere-bound ParB, but when bound to ADP, ParA fulfills a different function: DNA-binding transcription autoregulation. ParA consists of an elongated N-terminal alpha-helix which mediates dimerization, a winged-HTH and a Walker-box containing C-domain. This entry describes the N-terminal alpha helix domain combined with the winged HTH region.	9.9085e-53
NC_014838.1\|WP_190274681.1\|51309_51834_-\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.27006e-63
NC_014838.1\|WP_013511166.1\|53786_54932_+\|FAD-dependent-monooxygenase	gnl\|CDD\|181262	PRK08163, PRK08163, 3-hydroxybenzoate 6-monooxygenase.	1.83194e-73
NC_014838.1\|WP_013511164.1\|51881_52343_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	2.01328e-14
NC_014838.1\|WP_013511149.1\|30961_31660_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	3.68342e-74
NC_014838.1\|WP_041526070.1\|34140_35547_-\|FAD/NAD(P)-binding-protein	gnl\|CDD\|226906	COG4529, COG4529, Uncharacterized protein conserved in bacteria [Function unknown].	2.34674e-113
NC_014838.1\|WP_013511159.1\|44772_46149_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|184426	PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional.	0
NC_014838.1\|WP_013511153.1\|35576_36749_-\|FMNH2-dependent-alkanesulfonate-monooxygenase	gnl\|CDD\|234821	PRK00719, PRK00719, alkanesulfonate monooxygenase; Provisional.	0
NC_014838.1\|WP_013511150.1\|31656_32676_-\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	5.25966e-104
NC_014838.1\|WP_013511162.1\|47746_51313_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	7.91375e-67
NC_014838.1\|WP_013511151.1\|32672_34064_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	0
NC_014838.1\|WP_013511161.1\|46760_47732_-\|XdhC-family-protein	gnl\|CDD\|224886	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones].	7.23278e-52
NC_014838.1\|WP_150105831.1\|46204_46777_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.40031e-31
NC_014838.1\|WP_013511154.1\|37023_38958_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.55655e-126
NC_014838.1\|WP_013511155.1\|39406_40378_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|370113	pfam08775, ParB, ParB family. ParB is a component of the par system which mediates accurate DNA partition during cell division. It recognizes A-box and B-box DNA motifs. ParB forms an asymmetric dimer with 2 extended helix-turn-helix (HTH) motifs that bind to A-boxes. The HTH motifs emanate from a beta sheet coiled coil DNA binding module. Both DNA binding elements are free to rotate around a flexible linker, this enables them to bind to complex arrays of A- and B-box elements on adjacent DNA arms of the looped partition site.	2.67142e-55

>NC_014838.1|WP_013511156.1|40385_41585_-|AAA-family-ATPase
MANDEKQVLKVAQRSERMLMSLTEQIQAQKEELQENTFYQVYAKAALAKLPKLTRASVDYAVNEMEENDYPFDKRAAGSSTKYAMSIQNIIDIYHHRGVPKYRDRHSEAFTLFVGNLKGGVSKTVSTVSLAHALRAHPHLLFEDLRILVIDLDPQSSATMFLNHERSVGLVEATAAQAMLQNVSREELLSEFIVPSIIPGVDVLPASIDDAFIASRWDELCAEHLPQHNVHSVLHENVIVKLKKDYDFIFIDSGPHLDAFLKNAIAASDLLMTPVPPAQVDFHSTLKYLTRLPELIGIIEDSGASCRLQGNIGFMSKLSNKADHKLCHSLAKEIFGGDMLDAALPRLDGFERCGESFDTVISANPSTYVGSSEALKNARSAAEDFAKAVFDRIEFIRLN
>NC_014838.1|WP_013511155.1|39406_40378_-|ParB/RepB/Spo0J-family-partition-protein
MSAKRITIGRTFSQTPLQTEETSEGHAQTFILSTGKRAQFTLERIAAKEIEDRTFVVMETNGRDQSGLTPESLRDIIRTIKLQQFFPAIGVQRDDRIEILDGSRRRAAALHCKTGLDVLVTDAAISAEEARRLAQDIQTAREHNLREVGMRLMALKDSGLSQKEIAQSEGLSQAKVTRALQAASVPADLITLFPNHSELTYPDYKSLLQAYEKLQETGQTVEALIDAIGMDVDTVCARDGLAEDEVKNGILRLVRNGSQTLVQSPAKDKVVATALWTFADKDRFARKKTRGRMFSYEFNRQSKELQDELDRVINETLSKYLNQ
>NC_014838.1|WP_013511154.1|37023_38958_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MLTPYADFTDSPRLVDPASRAFQTLLDKFAPTDATVLIAGETGTGKEVVARYLHHHSARRHCPFLAVNCGALTESLAEAELFGHEKGAFTGATQAHPGWFESAQGGTLLLDEIGELSLPLQVKLLRVLQEREITRVGSRKAIKVDVRVIAATHVDLALAIRERRFREDLFYRLNIAVVPLPPLRQRREDIPVLAQHFLALYSRRLGRPARRLSSEALEALMEYSWPGNIRELENTLHNAVLLSREETLTPAQLRLSGYSEHQFGDVPGSTLDNFLRQYLMTEPHQLFDRVVQSLINNALELSDNNQTQAAGLLGISRHTLRTHLANQGVIKGRRKTASVTPGTIVSSQQGERELRIGYQKFGNLGVLKARQSLEQCFAKQGVNVLWSEFPAGPQLLYALQNNEIDFGTTGEVPPIFAQASGNAVTYIAWEPPAPSSVGIIVPYDSDIRALSDLRGKRISVNKGSNVHWLLLQLLDEAGIGLDEVKVVYAPPKYPLTASDYLSVDAWMMWDPLLSAAENNPALRVLATGTGRVCNHQFYLARRDYVQQHDDILHQLVEALQQTGQFIDSRGHQAAMLLAQELGLETDAVERALSRRSHQTRAMAFDVIKQQQAIADRFYALGLISKPVRVREAVWQPSSELRLLA
>NC_014838.1|WP_013511153.1|35576_36749_-|FMNH2-dependent-alkanesulfonate-monooxygenase
MADSVNENINVFWFLPTHGDGRYLGTTEGGRPVDLGYLQQVALAADNLGFYGVLIPTGKSCEDSWLVASALAPLTRRLRYLVAVRPGLQPPTLAARMASTLDRLSDGRLLINVVTGGDPIENKGDGIFLSHSERYAVTKEFLDVYSRLLRGEKVDYKGQHIHVEGAEVLFPPVQENGPPLYFGGSSDEAIDVAAGQIDTYLTWGEPPAQVAEKLAVVRARAEARGRKLEYGIRLHVIVRETEEEAKAAADKLIAHLDEETIAQAQKIFARMDSAGQARMSALHNGSRDNLYIAPNLWAGVGLVRGGAGTALVGSPEQVAARIREYQALGVTNFILSGYPHLEEAHRVAELLLPLLPLAHGQQQRARSVNTGPFGETIGGDKRPTKQASAS
>NC_014838.1|WP_041526070.1|34140_35547_-|FAD/NAD(P)-binding-protein
MQIPHVMIVGGGFSGTALAIHLARHATAPLRVTVVEPRLTLGAGVAYSTQEPAHRINVPASRMQLSGDEQGAFDRWYRQQPECSLDSVAHCADGAVYPQRGMFGRYLAEQFAVAAQQHPQVTLRHIRASAIAWEGQQLLLSNGDTLKGDVLALAISHPPPSLPKALLPFAEHPALIANPWQPGVLDSIANTASVAIIGTGLSMADVVASLATRQHRGPLLAFSRRGQLSRANLSGDWPEWTLAPQQQPSTRLWLHHIRAEVARAAEQQLPWQRVLDEVRVQGQTIWQSLPLREQQRFVRHLRSWWDVHRYRIAPQVAAEITQRQQAGSLRVLAARLTAIASRGDQLDIALHTRTGVTENHQLDHLIVTTGPGHEALTASQPLLLSLSQQGIIRPDALGFGIDVDRQSHTLTRAGQPNQKLFVVGPAARARFGELMGLPQVADHAAEVARHILTSLHIKHAERCPPLAP
>NC_014838.1|WP_013511151.1|32672_34064_-|LLM-class-flavin-dependent-oxidoreductase
MPSQREIRLNAFDMNCVGHQSPGLWAHPRDRSWQYKDLEYWVDLARLLERGKFDGLFIADVLGIYDVLNGNGDAAIRQATQVPVNDPLALITPMALVTEHLGFGLTASLSFEHPYPFARRLSTLDHLTKGRIGWNIVTSYLESGARNIGHKAQTDHDSRYDYADEYLQVVYKLLEGSWEADAVLRDRERRIFSDPRKIHPINHQGTFFNVPGIHLCEPSPQRTPVLYQAGASSRGKQFAAEHAECVFVAAPSKVLLKKTVADIRRRAAEAGRDPHSILIFNLQTVIVGETDKAAQAKWQEYKSWVSYEGALALVSGWTGIDFGQYQPDQVLKYLHTNAIQSAVETFSTADPDRQWTVAALADWVGIGGFGPLLVGSAATVADELQSWVEETDVDGFNLAYALTHETFEDVVELLIPELQKRGVFKKEYASGTLREKLFRAGPQLQSPHPGAGYRVQSVPQEVI
>NC_014838.1|WP_013511150.1|31656_32676_-|methionine-ABC-transporter-ATP-binding-protein
MIEIEALSKHYRAPDGRVTEVLKSINLEVQPGNITAVVGPSGAGKSTLAKCISLLEQPSAGSIRVNGHDLSRLSGEVLRRERRAIGTVFQSSALLQRKSAWENIALPLRYLGVVERDINARVGELLEHVGLSHKAHAFPAQLSGGQRQRIGIARALALRPSVLLADEATSGLDPAATVTILDLLRKLRDEYRLAIVLITHEMDAVRRAADAVAEIREGQIVHYGVVKQLLAQPESRLAHQLLPLSPQPASSELVLQLSYRTDVAVASDWLSRLSQQFALRIDLLGAHVEQVNGLQLGRLQVGIHFQRERVPLSQLLVQLEQLGLVASVVAGVPVLKEAV
>NC_014838.1|WP_013511149.1|30961_31660_-|ABC-transporter-permease
MSVSVMSQDTPWNEIPALMLPALGETVLMVGIVMLFVVTCGGVVGVVLFNTSARGLFPHRGINRVLSWMVNMGRSLPFLVLMAAIIPFTFWLTGTTIGIPAAVVPMIAAGIPFFGRLVDNALRELPAEVTAVGLVCGGSRWQIIRQAQLSEALPAIVAAITLNLISMIEYSAIAGTIGAGGIGYLAVVYGYQRFDNHIMIATIVVLVVLIQTIQFLGDRLVTALRHPQGTSL
>NC_014838.1|WP_013511148.1|30089_30965_-|metal-ABC-transporter-substrate-binding-protein
MTTQEFELRKTRRWPWLLLIIVVVAVAAAAWFWRSQQPQAVVFGTTLKIHYEPAMAGEQKLIEYVNDHIAADYGLKLEAVGVQDPVQADRAVAEGQYAATVYQHQWWLKQVVDANNFALTPTLPLFQWAFGIYSDRYPSVDALPQGATIVVPDDGANQGQALWLLARQGLITLDPNVEPRTAKLKNITGNPHGFVFKELDLLTMPRALNSVDAAIGYVSQFDAGKVPRDKGILFPPAPRTFASQLVIGTPYLSQENIEKLKKAFSDPRLQQWLKTTDDPLVKGVLVPVSAD
>NC_014838.1|WP_013511147.1|28479_29913_-|MFS-transporter
MSTLPLDNTLPVSEPVRSVSDVARLINTRSDKNNYARMIVFLALGGVFLDAYDLTTLSYGIDDVVREFQISPFITGLVTSSIMVGTIVGNLIGGWLTDKYGRYSVFMADMLFFVVSAIAAGLAPNVWVLIGARFLMGIGVGIDLPVAMSYLAEFSKFAGKGNKAARLAAWCPMWYAASTLCFLLIFGLYFLLPKEHLDWLWRASLLFGAVPALLIIAVRSKFMNESPLWAANQGDLKSAVRILRDSYGIHAHAAEPEAPPAAAAPKVSFRVLFQQPWRERTIVAGVMNICISFEYTAIAFFLPSILAQFLGAGVFETISASLGLNALFAFTGGLLGMRLAWKYPSRHVAIAGFALQFVALIALALIGHPEALAGIVFAVLMLGLWLFAEGFGPGAQLMVYPALSYPTSIRATGVGFSRALSGIGSALALFILPILQAALGTNMFWVVSLSAIIPIFFLLAVRHEPTRHDIDDLSHQE
>NC_014838.1|WP_013511158.1|43366_44296_-|RepB-family-plasmid-replication-initiator-protein
MADKESENKALLEPFLSVTKNSGEVIQLHPNKNNTVQPVALMRLGLFVPTLKSTARGKSGAMASTDATKELKNLSLVKAEGYEKITITGARLDMDNDFKTWAGIIQSFSRYPSKGDTVTLPFIDFVKMCGIPSANSSAALRKRLDASLRRIATNTLSFEGNGKAYHTHLVQSAYYDREKDVVRIQADPKLFELYNFDHKVLLQLRAISRLKRKESAQALYTYLESLPTNPAPISLARLRMRLNLGSKTTTQNHVVRRAMEQLKEIGYLDYSEVKRGRSVFFIIHSRTPKLDGISNLESIDALEDLDFED
>NC_014838.1|WP_013511159.1|44772_46149_+|aldehyde-dehydrogenase-family-protein
MTDNVISRNPTNGEILASWPLQNAAELEISLQQSAQAFSEWRMTSMVQRVQVLRQLAEQIRQRQDELAAMATLEMGKPIAQARAEVLKCSNLCDWYAEHGPAMLADKPTLVENQQAWQAFRPLGVILAVMPWNFPYWQVLRGAVSMLLAGNTYLLKHAPSVMGCANLITSLFDATDLPKGAFTVINVDNDGVSIAIKDPRIAAVAVTGSVRAGGAIAAQAGAVLKKTVLELGGADPFIVLADADLDAAVASAVTGRYQNTGQVCMAAKRFIIEESVAEAFEARFSAAVQALNIGDPLEETTYIGPMARYDLRDELDRQVQQSIAEGARVVTGAHKIEGPGNYYAPTILADVTPEMTAFQQEIFGPVAAITVARDAQHALELANNSEFGLSATIWSGNEALANELAQQLETGAVFINGNGASDPRVAIGGVKKSGYGRELSSFGVYEFCNVQTVWKNRR
>NC_014838.1|WP_150105831.1|46204_46777_+|NTP-transferase-domain-containing-protein
MNTPGIIILAAGLGLRFNRAGGQGNKLLAPQQNQQPLLALTLRQAQDSGLPVLVVTRPEYHAVLDLAQQCQIPAITVASSGSGESIAAGIRQTRNWAGWLIQPGDMAWVTAQDHQYVAQALAAGAQQVRLCWDQQPGHPVGFAAGYGQALSELSGDNGARMLLDPTILLTISAHAGVIRDADLPEPTNHS
>NC_014838.1|WP_013511161.1|46760_47732_-|XdhC-family-protein
MLSLDQRVIDQGLLWLQQGKVIWLCTVLHSWGSAPRSPGAMLVADAEGHWSGSLSGGCIEEDFLARVQQGAYPHVSERVRYGAEGLTPPVQLPCGGVLDVLVERLEPQERSLALLGAMQEALSGGPLLTRYITLGCDHEWQPLATGAPLPLLRYDDDSAVLPVGAVTTVLIAGYSAVASDCIRLALMLGFRVVVCEHRDAEFEQLQAASGTSENLHCVQQHPARYLEQSGASAGTAILCLTHDPRVDDLTLMEAVHTPAFYIGAMGSAKNSQKRLQRLAELGGLSEQALARIHAPVGLPIGSKTPGEIALATLADIVRVRNGL
>NC_014838.1|WP_013511162.1|47746_51313_-|molybdopterin-dependent-oxidoreductase
MSHSAVPTQQQLLAADDVLLIVDEIQPPPGLVPKGQTPTLKPKELALFIAIDGKGKVWAFNGHVDLGTGVKTSLTQIVAEELNLRMDQVQMVLGDTLRVPNQGATIASATLQISAVPLRKAAAEARRWLTQQAAARLQVTEAELSLDAGEFHLADGTRLSFAELVSGQRSQLRISDDAPLKPASEYRLVGTSSQRVDIPGKATGELTWVHDMRLPGMLHGRVIRPPYAGYDTGQFVGTSLLSIDESSIAHLDGIIKVVQIADFVGVVAEREDQAIAAMETLKIRWKPWEHMLPDMRDVEKAIRDNPRTSRVVHDTGEVDAALANVAQRFTRNYVWPYQLHGSIGPSCAVAAYDAVGLQVWSGTQNPHLLRADLAWLFEIPESDIEVNRMEAAGCYGRNCADDVAADAALLSRAVGQPVRVQLTRAQEHVWEPKGTAQLMDVDGGLDAAGNPQVYDFTTSYPSNGAPTLALLLTGRVDPVALAYEMGDRTSIPPYDFPHMRVTIEDMAPIVRASWMRGVSALPNTFAHESYMDELAHAAGVDPVEYRLRYIQDERAAELIRSTADRAGWTPRTEPQQNSSEPGVLRGRGFAYARYIHSKFPGFGAAWAAWVADVAIDKQSGEIAVTRITVGHDAGMMVNPAGVKHQIHGNVIQSTSRVLKEQVTIESNLIASQEWGSYPILTFPEVPDIDVMMMPRPYEPPLGAGESASVPSAAAIANAVFDATGIRFRELPITSDKLRQALNGPDPQPEPQLPAPVRKKTTRRRKWAFGGAAGLLGAAIGIATNALPWRAAIAPVTPPAAGSWSLEMLERGRQVAAAGDCAVCHTTEGGATNAGGLKMDTPFGTLYTTNITPDKKTGIGNWSFNAFDRAMRQGISRDGHHLYPAFPYTSFRQLSEGDMQALYAYLMSQPAVEQAPPANQMRFPFNMRFLMAGWNTLYLRTGEYQDDATKSAEWNRGAYLVNGAGHCGACHSPRNLMGAEKGGDQFLAGGWVDGWEAPPLNQLSKSPQPWTAASLYNYLRNGYDDKHGVAAGPMAPVVSHLATLPEADVRAMASYLADINGQTPAPVASPTVKPAWNTAAGERLFKGACQACHSASEGGPKLFGVSPAMANSSSLTSATPDNLLQVVLHGIDKPATDELGYMPGFAASLSDKQVADIAAYLRQRYAPNEPAWADLTEKVAQVRANPSSH
>NC_014838.1|WP_190274681.1|51309_51834_-|(2Fe-2S)-binding-protein
MAQQSATTVSPAGLRCYSLKVNGEEKEVTSYRDTSLLLVLRNELSLNGPKYGCGLGECGACTVMIDGVAARACVIPAYGVRQRAITTLEGLGQRDALHPVQQAFIEEQAAQCGYCLNGMIMTTAALLRDIPCPSDQQIRSALSGNLCRCGTHQEILCAVKRAVQLCLQQAEAAQ
>NC_014838.1|WP_013511164.1|51881_52343_-|winged-helix-turn-helix-transcriptional-regulator
MSHDHTSSAEDNYDYTQQVGHLLRKVYQRHVAIFQQHVGDSQITAVQFITLCALRDHGPSAQNDLVRYTAVDQATIRGVVERLKARDLVSLGPDPTDKRKVIVMLTASGQALIQHTTDNAVRITEMTYGQLNPAERVALVYLLRKMLDDTSQS
>NC_014838.1|WP_013511165.1|52420_53473_-|2,5-dihydroxypyridine-5,6-dioxygenase
MAVNQSQLGQMFEQVLRLSKVDATQSVAILKSHYSDARTVQAATDAALRLGAKVYCVELPAFNHPTAMGNDMTAYCGDTALTGNIAAQRALEAADLIVDTMMLLHSPEQEQILKTGTRILLAVEPPEVLARMLPTEEDKSRVLAAAAVLEKARMMTVKSQAGSDFRAPLGQYPTVTEYGYADEPGRWDHWPSGFLFTWPNEDQAEGVLVLEVGDILLPFKSYARERITLEIEKGFVTKIHGGFEAEYLRDYMGYFNDPEVYGISHIGWGLQPRAQWTAMGLHDKNDGMCMDARAFYGNFLFSTGPNTEVGGKRKTPCHMDIALRRCDIKVDDLLVVAEGEVVAPEASRAR
>NC_014838.1|WP_013511166.1|53786_54932_+|FAD-dependent-monooxygenase
MSNMKRIAIVGAGLGGLAAGSLLQKAGFNVQVYEQSPAFSRLGAGIHMGPNVLKVFRRMGIEQQLEDLASHPDFWFSRDGETGEYLSRIPLGEFARKEYGAAYVTVHRGDLQAMQMTSLEPGSVHFGKCLSSVEDSGSDVVLRFQDGSEERADIVIGADGINSKLREHLLGAEAPTYSGWVAHRALIRGEQLRKYNLNFEDCVKWWSEDRHLMVYYTTKSRDEYYYVSGVPHPAWDFKGSFVDSSQQEMLETFGHYHPVVQALIECSENVTKWPLLNRQPLPVWSEGRIVLLGDACHPMKPHMAQGAAMAIEDAAMLARCLTETGLDDYSTAFRLYEVNRKERASRVQSVSNANTFLRTQEDPAWVYGYDVFAAPLKSEGA
>NC_014838.1|WP_013511167.1|54931_55753_+|alpha/beta-hydrolase
MSTFVSGGQVQANGIRQHYLRYGGKGPTLILVPGITSPAITWGFVAEVFGQQFDTWVLDVRGRGLSSSGEGLDYGTESCADDINAFAQALGLTHYHLVGHSMGARFIMRAAVKQPEGVLSLSLIDPPVSGPGRRLYPGQWPWYQDSIREAEQGMDAEAMKKYCPSWTEEQRQLRAEWLHTCYEPAIRRAYDDFHQLDIHQYFRQLPAKTLLMVAGKGGVILAEDEAEIRELLPAIDIAHVENAGHMIPWDDFSGFFAAFGTFLGTTLQPETQP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014838_1	1.1\|42474\|23\|NC_014838\|PILER-CR	42474-42496	23	NC_014838	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	42468-42490	0	1.0
NC_014838_1	1.2\|42522\|20\|NC_014838\|PILER-CR	42522-42541	20	NC_014838	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	42516-42535	0	1.0

1. spacer 1.1|42474|23|NC_014838|PILER-CR matches to NC_014838 (Pantoea sp. At-9b plasmid pPAT9B01, complete sequence) position: , mismatch: 0, identity: 1.0

taatgagggaaccaggggatacc	CRISPR spacer
taatgagggaaccaggggatacc	Protospacer
***********************

2. spacer 1.2|42522|20|NC_014838|PILER-CR matches to NC_014838 (Pantoea sp. At-9b plasmid pPAT9B01, complete sequence) position: , mismatch: 0, identity: 1.0

caaccgataaccagacgaaa	CRISPR spacer
caaccgataaccagacgaaa	Protospacer
********************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

224960 : 263185

Enterobacteria_phage(25.58%)

capsid,tail,protease,holin,portal,terminase,integrase,head

attL 213352:213367|attR 246210:246225

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
213352:213367	attL	NA	NA	NA	NA
WP_013511339.1\|224960_226103_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21940	Phage_21	4.2e-85	45.6
WP_013511340.1\|226077_226341_-	hypothetical protein	NA	NA	NA	NA
WP_013511341.1\|226394_226739_-	hypothetical protein	Q858C6	Salmonella_phage	1.2e-35	61.6
WP_013511342.1\|226731_227124_-	hypothetical protein	S4TTI6	Salmonella_phage	3.1e-48	71.7
WP_013511343.1\|227116_227818_-	hypothetical protein	A0A077KCB2	Edwardsiella_phage	1.5e-45	42.4
WP_013511344.1\|227810_228014_-	hypothetical protein	A0A1B0VN94	Pseudomonas_phage	1.0e-18	74.1
WP_013511345.1\|228013_228454_-	hypothetical protein	NA	NA	NA	NA
WP_013511346.1\|228450_228894_-	hypothetical protein	NA	NA	NA	NA
WP_071883934.1\|228880_229072_-	DUF1317 family protein	NA	NA	NA	NA
WP_013511348.1\|229471_229867_-	hypothetical protein	NA	NA	NA	NA
WP_190274679.1\|230332_231004_-	helix-turn-helix transcriptional regulator	K7PK07	Enterobacteria_phage	8.2e-57	51.6
WP_013511351.1\|231137_231368_+	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	3.7e-17	60.0
WP_013511352.1\|231399_231936_+	phage regulatory CII family protein	K7PJS5	Enterobacterial_phage	5.1e-25	41.7
WP_071783557.1\|232210_232393_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.9e-09	62.3
WP_013511354.1\|232382_233264_+	conserved phage C-terminal domain-containing protein	A0A1C9IHW0	Salmonella_phage	1.2e-36	54.7
WP_150105848.1\|233263_233674_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_013511356.1\|233789_234617_+	ParB N-terminal domain-containing protein	A0A2H4J902	uncultured_Caudovirales_phage	1.4e-93	67.8
WP_013511357.1\|234616_234766_+	hypothetical protein	NA	NA	NA	NA
WP_013511358.1\|234762_235389_+	DNA methyltransferase	I6PDF5	Cronobacter_phage	2.1e-86	72.3
WP_013511360.1\|235513_235879_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	1.6e-38	60.7
WP_013511361.1\|235875_236892_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	3.2e-97	52.2
WP_013511362.1\|236912_237341_+	antitermination protein Q	U5P0A5	Shigella_phage	7.3e-43	68.3
WP_049792213.1\|237420_237702_+	hypothetical protein	NA	NA	NA	NA
WP_013511364.1\|237893_238232_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.1e-30	57.8
WP_013511365.1\|238234_238777_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	8.9e-78	77.0
WP_041526038.1\|238749_238980_+	hypothetical protein	A0A2P9HXL2	Yersinia_phage	6.8e-11	46.9
WP_013511367.1\|239187_239517_+	hypothetical protein	B6SD04	Bacteriophage	2.4e-17	52.6
WP_013511368.1\|239513_239756_+	DUF1378 family protein	NA	NA	NA	NA
WP_013511369.1\|239859_240081_+	hypothetical protein	NA	NA	NA	NA
WP_013511370.1\|240241_240499_-	hypothetical protein	NA	NA	NA	NA
WP_013511371.1\|240891_241287_+	hypothetical protein	NA	NA	NA	NA
WP_013511372.1\|241439_241790_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	3.5e-51	79.1
WP_013511373.1\|241947_242445_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	6.9e-69	78.8
WP_013511374.1\|242444_244202_+\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	88.7
WP_013511376.1\|244396_245626_+\|portal	phage portal protein	U5P411	Shigella_phage	7.4e-205	83.2
WP_190274685.1\|245615_246266_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	7.6e-84	74.1
246210:246225	attR	NA	NA	NA	NA
WP_013511378.1\|246279_247491_+\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	3.8e-193	84.9
WP_013511379.1\|247531_247825_+	hypothetical protein	A0A1B5FP98	Escherichia_phage	5.4e-05	50.0
WP_013511380.1\|247854_248160_+\|head,tail	phage gp6-like head-tail connector protein	A0A1B5FP86	Escherichia_phage	4.1e-24	52.5
WP_013511381.1\|248171_248510_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	6.2e-37	66.7
WP_013511382.1\|248506_248953_+	HK97 gp10 family phage protein	K7P712	Enterobacteria_phage	2.8e-53	74.5
WP_013511383.1\|248949_249297_+	DUF3168 domain-containing protein	A0A220NRP0	Escherichia_phage	2.7e-27	53.6
WP_013511384.1\|249352_249820_+	hypothetical protein	K7PJR9	Enterobacterial_phage	4.1e-63	78.8
WP_013511385.1\|249872_250277_+\|tail	phage tail protein	A0A220NRP3	Escherichia_phage	1.1e-35	63.1
WP_013511386.1\|250300_250564_+	DUF4035 domain-containing protein	K7P7L5	Enterobacteria_phage	1.6e-27	69.0
WP_013511387.1\|250632_250974_+	hypothetical protein	A0A0M4QWT0	Salmonella_phage	5.5e-09	38.2
WP_013511388.1\|251013_254280_+\|tail	phage tail tape measure protein	A0A220NRN7	Escherichia_phage	1.9e-308	77.4
WP_013511389.1\|254321_254663_+\|tail	phage tail protein	E4WL34	Enterobacteria_phage	3.9e-31	60.6
WP_013511390.1\|254709_255447_+\|tail	phage minor tail protein L	M9NYX1	Enterobacteria_phage	2.0e-120	80.8
WP_013511391.1\|255449_256169_+	C40 family peptidase	M9NZD8	Enterobacteria_phage	4.3e-104	70.6
WP_013511392.1\|256161_256785_+\|tail	tail assembly protein	M9NZA3	Enterobacteria_phage	1.0e-61	59.9
WP_013511393.1\|256839_260028_+	host specificity protein J	E4WL39	Enterobacteria_phage	0.0e+00	60.6
WP_013511394.1\|260027_260984_+	hypothetical protein	A0A2P1CKS0	Pantoea_phage	9.0e-57	42.6
WP_013511396.1\|261352_262513_+\|tail	tail fiber domain-containing protein	H6WRW6	Salmonella_phage	1.4e-59	39.6
WP_013511397.1\|262548_262812_-	hypothetical protein	NA	NA	NA	NA
WP_013511398.1\|262945_263185_+	hypothetical protein	K7P7N3	Enterobacteria_phage	9.2e-11	45.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014837

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_014838

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection