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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_015136 Burkholderia sp. CCGE1001 chromosome 1, complete sequence 0 crisprs WYL,cas3,csa3,RT,DinG,DEDDh 0 0 5 0
NZ_CP012899 Burkholderia sp. CCGE1001 plasmid pCCGE1001a, complete sequence 0 crisprs PD-DExK,RT 0 0 9 0
NC_015137 Burkholderia sp. CCGE1001 chromosome 2, complete sequence 0 crisprs DinG,cas3,csa3,PD-DExK 0 0 0 0

Results visualization

1. NC_015136
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 723546 : 731697 8 Escherichia_phage(28.57%) NA NA
DBSCAN-SWA_2 1063756 : 1117675 35 Pseudomonas_phage(30.0%) transposase,integrase,tRNA attL 1063668:1063727|attR 1112625:1113534
DBSCAN-SWA_3 2012189 : 2019504 11 Bordetella_phage(66.67%) NA NA
DBSCAN-SWA_4 3200723 : 3213260 14 Ralstonia_virus(22.22%) protease NA
DBSCAN-SWA_5 3901272 : 3931364 39 Burkholderia_phage(72.97%) holin,plate,tail,terminase,integrase,capsid,head,portal attL 3895601:3895641|attR 3931434:3931474
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP012899
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 2162 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_2 5834 : 152035 99 Escherichia_phage(10.53%) transposase,integrase attL 10959:10975|attR 130247:130262
DBSCAN-SWA_3 156024 : 157293 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_4 166131 : 167238 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_5 172196 : 246472 58 Escherichia_phage(25.0%) transposase,integrase attL 184781:184832|attR 236145:236196
DBSCAN-SWA_6 249840 : 318066 52 Pseudomonas_phage(21.43%) transposase,integrase attL 252204:252263|attR 276505:279539
DBSCAN-SWA_7 332753 : 400745 58 Leptospira_phage(30.0%) transposase NA
DBSCAN-SWA_8 412291 : 413116 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_9 416461 : 417436 1 Escherichia_phage(100.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage