CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_014834	Rhodopseudomonas palustris DX-1, complete sequence	1 crisprs	csa3,WYL,cas3,cas5,cas8c,cas7b,cas4,cas1,cas2	1	27	6	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_014834_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014834_1

3320018-3323360

TypeI

I-C

Consensus_repeat	Method
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	PILER-CR
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CRISPRCasFinder
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CRT

50 spacers

cas2,cas1,cas4,cas7b,cas8c,cas5,cas3

The CRISPR arrays of NC_014834_1

>merge|NC_014834|1|3320018-3323360|PILER-CR,CRISPRCasFinder,CRT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAACGTTTAAACTCGTTGAGGACGAACGTGCGGCAGCTGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACGGCACCGTCCCAAGTTGACGCCCCAACAGATGCTGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCTTCCGCGAGGGGTCAGCCGACGCGTAAGTGAAGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCTCGTCGGCCTCACCGTCGTCCGGCCGAAAATCTGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACTTGCTACCTACGGCGTGCGTCGGCCTCGTACTGAGCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACATGCGTCAACACAGCCTCACGGAGATGAGTTATGAAGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACTCGTGGCCGGGTGCGCCGCTACTCTGCGCGGTCCGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACATGCGTCAACACAATCTCACGGAGATGAGTTATGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCGGCACAGGCCGAAACTGACGCCTCAGCAGATGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCCCGCGCATCCGGAAACGGCTAGAACCCCCCGCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCACGAGTACTCAGTATAGCTACTCGTGGGCTGAGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACATCGAAAACGTGGTGGCGTAGTCCGGGGGGCGATCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACACTTACGCCTCGGCTGACCCGGCGCGTAAGGAAGTGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACACCGTGAGGTGATCGGCAAGCCGTCCGAACGGTAGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACAGCGTCGCGAAGCCGGCGCCGTGTGCGAGCCGCGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACAGCAATCGAACGACCCGCTGCCGCCCGATCGTCGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACTTCGTCGGCGATCTGACCCGCGACCTCTGCCACGTCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACTTGGCCATCTGCGGTTACTCCGTGGTCTGGACGCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACGTCGGACATCTGCGCGCGCTCGCGCAGCTCCGCCTGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACAACTGGAAGATCTACGACAGCAACCCGGCGGCCTGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCAGCACGCCCTGGCTGAGTGCATGGGCGATCTCCTGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACGACATCGAGATCGAGGCCGCGGTCTACGTCGTCACGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACATGCCTGCGGTTTGCTGTCCGCATCCTGCTTGAGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACGCGCCGGAGCGTCGACAACTCAAGGCGACGTGTCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCTGCGCGGCCTGGAGGCGGCGGCAGAATTTGTCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCTGCTGCAATCGTTCGGGCTGAAGGACTGGAGCGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACATATAGTCGTCGAGTGCGCCATTGAATTCAATCATGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCTCCGCGCGGTCAACGGCGTCGACACCCCGCTGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACACGGCGACGCAGACGCTGACGCCGGAGCAGCAGGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACATCGGCGACGCCAACGCGGCCAGTTCGGCGGAACGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACACGCTGCTGATAGAGCTGCTGCAGCGCCTTGACGGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACACTGAGGGGCAGCCCGGCTTCGCTGGCTCGGATGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACAACGATCCCGGCCAGCCAGCCAAGCAGGTGTCCGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCTCGGAATAGACCGCGGCGTCGGCGACATCGCGGAGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACATCGCCTCCAGCGCCTCGGCGACGCCCATCAGCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACATCCCGGTCAGCAACGAACTCTCGCGCGGCATGGCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACATCGCCGACGATCCCGAGGTGCATTGCCTGCCCTGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACTTCAATTGCGGCACCAACATCGTCAACGGCTCGGCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACAGGATCTCGTCCGCCTTGCCGATCCGGTACTCGGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCGCTTTGCGCCGTTCGCCGAGCGCGTGGCGATGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACTATCTCTGCTTTCGCAGAAAGGCGCGCGGCTACGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACAACGCCAGGGCGCAAGACGCGCTGCAAGAAGCCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACTTCGGCGCTGGGCCTGCTGGCAGATCGCTCGTGCCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACACGTGTCCGGGCGGCGCGTCGTTCCGCTACGCGCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACAGCGCGCCGACCGTCAGCTCAGTGACGCCGAAAGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCTTGGACGGCGACTTGCTGGTCAGCGTGATGCCGAGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACAACACCATGCCGCCGCCCTCGCCGACGTCACGGATGGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACCAATACGAAACTTTGCTTTTCGGGCAGCCGTACCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACACGCTCAGCCCGACTGACCATGCCCCGCACCCCGTCGCTCCCCGCGCGGGAGCGTGGATCGAAACACCGTCAAGGTGCCGCAGCCCGGCGCGGCACCCGGTCGCTCCCCGCGCGGGAGCGCGCCCGCCGGC

>NC_014834|1|1|3320018-3323294|PILER-CR
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GTTTAAACTCGTTGAGGACGAACGTGCGGCAGCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GGCACCGTCCCAAGTTGACGCCCCAACAGATGCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTTCCGCGAGGGGTCAGCCGACGCGTAAGTGAAG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTCGTCGGCCTCACCGTCGTCCGGCCGAAAATCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTGCTACCTACGGCGTGCGTCGGCCTCGTACTGAGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATGCGTCAACACAGCCTCACGGAGATGAGTTATGAA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TCGTGGCCGGGTGCGCCGCTACTCTGCGCGGTCCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATGCGTCAACACAATCTCACGGAGATGAGTTAT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CGGCACAGGCCGAAACTGACGCCTCAGCAGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CCCGCGCATCCGGAAACGGCTAGAACCCCCCGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CACGAGTACTCAGTATAGCTACTCGTGGGCTGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGAAAACGTGGTGGCGTAGTCCGGGGGGCGATC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACTTACGCCTCGGCTGACCCGGCGCGTAAGGAAGT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACCGTGAGGTGATCGGCAAGCCGTCCGAACGGTA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGCGTCGCGAAGCCGGCGCCGTGTGCGAGCCGCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGCAATCGAACGACCCGCTGCCGCCCGATCGTCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTCGTCGGCGATCTGACCCGCGACCTCTGCCACGTC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTGGCCATCTGCGGTTACTCCGTGGTCTGGACGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GTCGGACATCTGCGCGCGCTCGCGCAGCTCCGCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACTGGAAGATCTACGACAGCAACCCGGCGGCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CAGCACGCCCTGGCTGAGTGCATGGGCGATCTCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GACATCGAGATCGAGGCCGCGGTCTACGTCGTCAC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATGCCTGCGGTTTGCTGTCCGCATCCTGCTTGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GCGCCGGAGCGTCGACAACTCAAGGCGACGTGTC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTGCGCGGCCTGGAGGCGGCGGCAGAATTTGTC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTGCTGCAATCGTTCGGGCTGAAGGACTGGAGCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATATAGTCGTCGAGTGCGCCATTGAATTCAATCAT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTCCGCGCGGTCAACGGCGTCGACACCCCGCTG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGGCGACGCAGACGCTGACGCCGGAGCAGCAGG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGGCGACGCCAACGCGGCCAGTTCGGCGGAACG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGCTGCTGATAGAGCTGCTGCAGCGCCTTGACGG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACTGAGGGGCAGCCCGGCTTCGCTGGCTCGGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACGATCCCGGCCAGCCAGCCAAGCAGGTGTCCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTCGGAATAGACCGCGGCGTCGGCGACATCGCGGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGCCTCCAGCGCCTCGGCGACGCCCATCAGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCCCGGTCAGCAACGAACTCTCGCGCGGCATGGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGCCGACGATCCCGAGGTGCATTGCCTGCCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTCAATTGCGGCACCAACATCGTCAACGGCTCGGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGGATCTCGTCCGCCTTGCCGATCCGGTACTCGG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CGCTTTGCGCCGTTCGCCGAGCGCGTGGCGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TATCTCTGCTTTCGCAGAAAGGCGCGCGGCTACG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACGCCAGGGCGCAAGACGCGCTGCAAGAAGCC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTCGGCGCTGGGCCTGCTGGCAGATCGCTCGTGCC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGTGTCCGGGCGGCGCGTCGTTCCGCTACGCGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGCGCGCCGACCGTCAGCTCAGTGACGCCGAAAG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTTGGACGGCGACTTGCTGGTCAGCGTGATGCCGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACACCATGCCGCCGCCCTCGCCGACGTCACGGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CAATACGAAACTTTGCTTTTCGGGCAGCCGTACC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGCTCAGCCCGACTGACCATGCCCCGCACCCC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC

>NC_014834|1|1|3320018-3323360|CRISPRCasFinder
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GTTTAAACTCGTTGAGGACGAACGTGCGGCAGCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GGCACCGTCCCAAGTTGACGCCCCAACAGATGCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTTCCGCGAGGGGTCAGCCGACGCGTAAGTGAAG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTCGTCGGCCTCACCGTCGTCCGGCCGAAAATCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTGCTACCTACGGCGTGCGTCGGCCTCGTACTGAGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATGCGTCAACACAGCCTCACGGAGATGAGTTATGAA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TCGTGGCCGGGTGCGCCGCTACTCTGCGCGGTCCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATGCGTCAACACAATCTCACGGAGATGAGTTAT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CGGCACAGGCCGAAACTGACGCCTCAGCAGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CCCGCGCATCCGGAAACGGCTAGAACCCCCCGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CACGAGTACTCAGTATAGCTACTCGTGGGCTGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGAAAACGTGGTGGCGTAGTCCGGGGGGCGATC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACTTACGCCTCGGCTGACCCGGCGCGTAAGGAAGT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACCGTGAGGTGATCGGCAAGCCGTCCGAACGGTA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGCGTCGCGAAGCCGGCGCCGTGTGCGAGCCGCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGCAATCGAACGACCCGCTGCCGCCCGATCGTCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTCGTCGGCGATCTGACCCGCGACCTCTGCCACGTC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTGGCCATCTGCGGTTACTCCGTGGTCTGGACGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GTCGGACATCTGCGCGCGCTCGCGCAGCTCCGCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACTGGAAGATCTACGACAGCAACCCGGCGGCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CAGCACGCCCTGGCTGAGTGCATGGGCGATCTCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GACATCGAGATCGAGGCCGCGGTCTACGTCGTCAC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATGCCTGCGGTTTGCTGTCCGCATCCTGCTTGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GCGCCGGAGCGTCGACAACTCAAGGCGACGTGTC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTGCGCGGCCTGGAGGCGGCGGCAGAATTTGTC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTGCTGCAATCGTTCGGGCTGAAGGACTGGAGCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATATAGTCGTCGAGTGCGCCATTGAATTCAATCAT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTCCGCGCGGTCAACGGCGTCGACACCCCGCTG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGGCGACGCAGACGCTGACGCCGGAGCAGCAGG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGGCGACGCCAACGCGGCCAGTTCGGCGGAACG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGCTGCTGATAGAGCTGCTGCAGCGCCTTGACGG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACTGAGGGGCAGCCCGGCTTCGCTGGCTCGGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACGATCCCGGCCAGCCAGCCAAGCAGGTGTCCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTCGGAATAGACCGCGGCGTCGGCGACATCGCGGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGCCTCCAGCGCCTCGGCGACGCCCATCAGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCCCGGTCAGCAACGAACTCTCGCGCGGCATGGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGCCGACGATCCCGAGGTGCATTGCCTGCCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTCAATTGCGGCACCAACATCGTCAACGGCTCGGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGGATCTCGTCCGCCTTGCCGATCCGGTACTCGG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CGCTTTGCGCCGTTCGCCGAGCGCGTGGCGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TATCTCTGCTTTCGCAGAAAGGCGCGCGGCTACG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACGCCAGGGCGCAAGACGCGCTGCAAGAAGCC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTCGGCGCTGGGCCTGCTGGCAGATCGCTCGTGCC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGTGTCCGGGCGGCGCGTCGTTCCGCTACGCGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGCGCGCCGACCGTCAGCTCAGTGACGCCGAAAG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTTGGACGGCGACTTGCTGGTCAGCGTGATGCCGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACACCATGCCGCCGCCCTCGCCGACGTCACGGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CAATACGAAACTTTGCTTTTCGGGCAGCCGTACC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGCTCAGCCCGACTGACCATGCCCCGCACCCC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACCGTCAAGGTGCCGCAGCCCGGCGCGGCACCCG
GTCGCTCCCCGCGCGGGAGCGCGCCCGCCGGC

>NC_014834|1|1|3320018-3323360|CRT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GTTTAAACTCGTTGAGGACGAACGTGCGGCAGCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GGCACCGTCCCAAGTTGACGCCCCAACAGATGCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTTCCGCGAGGGGTCAGCCGACGCGTAAGTGAAG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTCGTCGGCCTCACCGTCGTCCGGCCGAAAATCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTGCTACCTACGGCGTGCGTCGGCCTCGTACTGAGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATGCGTCAACACAGCCTCACGGAGATGAGTTATGAA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TCGTGGCCGGGTGCGCCGCTACTCTGCGCGGTCCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATGCGTCAACACAATCTCACGGAGATGAGTTAT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CGGCACAGGCCGAAACTGACGCCTCAGCAGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CCCGCGCATCCGGAAACGGCTAGAACCCCCCGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CACGAGTACTCAGTATAGCTACTCGTGGGCTGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGAAAACGTGGTGGCGTAGTCCGGGGGGCGATC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACTTACGCCTCGGCTGACCCGGCGCGTAAGGAAGT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACCGTGAGGTGATCGGCAAGCCGTCCGAACGGTA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGCGTCGCGAAGCCGGCGCCGTGTGCGAGCCGCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGCAATCGAACGACCCGCTGCCGCCCGATCGTCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTCGTCGGCGATCTGACCCGCGACCTCTGCCACGTC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTGGCCATCTGCGGTTACTCCGTGGTCTGGACGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GTCGGACATCTGCGCGCGCTCGCGCAGCTCCGCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACTGGAAGATCTACGACAGCAACCCGGCGGCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CAGCACGCCCTGGCTGAGTGCATGGGCGATCTCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GACATCGAGATCGAGGCCGCGGTCTACGTCGTCAC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATGCCTGCGGTTTGCTGTCCGCATCCTGCTTGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	GCGCCGGAGCGTCGACAACTCAAGGCGACGTGTC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTGCGCGGCCTGGAGGCGGCGGCAGAATTTGTC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTGCTGCAATCGTTCGGGCTGAAGGACTGGAGCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATATAGTCGTCGAGTGCGCCATTGAATTCAATCAT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTCCGCGCGGTCAACGGCGTCGACACCCCGCTG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGGCGACGCAGACGCTGACGCCGGAGCAGCAGG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGGCGACGCCAACGCGGCCAGTTCGGCGGAACG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGCTGCTGATAGAGCTGCTGCAGCGCCTTGACGG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACTGAGGGGCAGCCCGGCTTCGCTGGCTCGGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACGATCCCGGCCAGCCAGCCAAGCAGGTGTCCG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTCGGAATAGACCGCGGCGTCGGCGACATCGCGGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGCCTCCAGCGCCTCGGCGACGCCCATCAGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCCCGGTCAGCAACGAACTCTCGCGCGGCATGGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ATCGCCGACGATCCCGAGGTGCATTGCCTGCCCT
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTCAATTGCGGCACCAACATCGTCAACGGCTCGGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGGATCTCGTCCGCCTTGCCGATCCGGTACTCGG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CGCTTTGCGCCGTTCGCCGAGCGCGTGGCGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TATCTCTGCTTTCGCAGAAAGGCGCGCGGCTACG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACGCCAGGGCGCAAGACGCGCTGCAAGAAGCC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	TTCGGCGCTGGGCCTGCTGGCAGATCGCTCGTGCC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGTGTCCGGGCGGCGCGTCGTTCCGCTACGCGC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AGCGCGCCGACCGTCAGCTCAGTGACGCCGAAAG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CTTGGACGGCGACTTGCTGGTCAGCGTGATGCCGA
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	AACACCATGCCGCCGCCCTCGCCGACGTCACGGATG
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	CAATACGAAACTTTGCTTTTCGGGCAGCCGTACC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACGCTCAGCCCGACTGACCATGCCCCGCACCCC
GTCGCTCCCCGCGCGGGAGCGTGGATCGAAAC	ACCGTCAAGGTGCCGCAGCCCGGCGCGGCACCCG
GTCGCTCCCCGCGCGGGAGCGCGCCCGCCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014834.1\|WP_013502809.1\|3314993_3316754_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NC_014834.1\|WP_013502807.1\|3311283_3313602_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_014834.1\|WP_013502823.1\|3334178_3334769_+\|gamma-glutamylcyclotransferase	unknown	unknown	gnl\|CDD\|119400
NC_014834.1\|WP_013502813.1\|3319544_3319835_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_014834.1\|WP_013502816.1\|3325908_3326541_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274164
NC_014834.1\|WP_013502810.1\|3316750_3317704_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NC_014834.1\|WP_013502817.1\|3326956_3328582_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|273817
NC_014834.1\|WP_013502821.1\|3332021_3333407_+\|Fe-only-nitrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|131977
NC_014834.1\|WP_013502820.1\|3331567_3332008_+\|Fe-only-nitrogenase-subunit-delta	unknown	unknown	gnl\|CDD\|376996
NC_014834.1\|WP_013502811.1\|3317721_3318393_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NC_014834.1\|WP_013502818.1\|3329109_3329937_+\|nitrogenase-iron-protein	unknown	unknown	gnl\|CDD\|183905
NC_014834.1\|WP_013502815.1\|3325760_3325952_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379284
NC_014834.1\|WP_013502812.1\|3318389_3319424_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_014834.1\|WP_013502805.1\|3308537_3309347_-\|NAD(+)--dinitrogen-reductase-ADP-D-ribosyltransferase	unknown	unknown	gnl\|CDD\|369330
NC_014834.1\|WP_041807902.1\|3333489_3334182_+\|Fe-only-nitrogenase-accessory-protein-AnfO	unknown	unknown	gnl\|CDD\|274358
NC_014834.1\|WP_041807353.1\|3313705_3314401_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NC_014834.1\|WP_013502806.1\|3309500_3310505_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NC_014834.1\|WP_013502804.1\|3307635_3308526_-\|ADP-ribosyl-[dinitrogen-reductase]-hydrolase	unknown	unknown	gnl\|CDD\|131710
NC_014834.1\|WP_013502819.1\|3329986_3331555_+\|nitrogenase-iron-iron-protein,-alpha-chain	unknown	unknown	gnl\|CDD\|130920
NC_014834.1\|WP_013502814.1\|3323721_3325743_+\|ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|236212

Protein	Function_ID	Function_description	E-value
NC_014834.1\|WP_013502809.1\|3314993_3316754_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NC_014834.1\|WP_013502807.1\|3311283_3313602_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.83813e-58
NC_014834.1\|WP_013502823.1\|3334178_3334769_+\|gamma-glutamylcyclotransferase	gnl\|CDD\|119400	cd06661, GGCT_like, GGCT-like domains, also called AIG2-like family. Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is encoded by the gene C7orf24, and the enzyme participates in the gamma-glutamyl cycle. Hereditary defects in the gamma-glutamyl cycle have been described for some of the genes involved, but not for C7orf24. The synthesis and metabolism of glutathione (L-gamma-glutamyl-L-cysteinylglycine) ties the gamma-glutamyl cycle to numerous cellular processes; glutathione acts as a ubiquitous reducing agent in reductive mechanisms involved in protein and DNA synthesis, transport processes, enzyme activity, and metabolism. AIG2 (avrRpt2-induced gene) is an Arabidopsis protein that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. avrRpt2 is an avirulence gene that can convert virulent strains of P. syringae to avirulence on Arabidopsis thaliana, soybean, and bean. The family also includes bacterial tellurite-resistance proteins (trgB); tellurium (Te) compounds are used in industrial processes and had been used as antimicrobial agents in the past. Some members have been described proteins involved in cation transport (chaC).	6.53528e-19
NC_014834.1\|WP_013502813.1\|3319544_3319835_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.74885e-32
NC_014834.1\|WP_013502816.1\|3325908_3326541_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274164	TIGR02495, RADICAL-ACTIVATING_ENZYME, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG, which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	2.93263e-73
NC_014834.1\|WP_013502810.1\|3316750_3317704_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	9.71366e-136
NC_014834.1\|WP_013502817.1\|3326956_3328582_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|273817	TIGR01817, Nif-specific_regulatory_protein, Nif-specific regulatory protein. This model represents NifA, a DNA-binding regulatory protein for nitrogen fixation. The model produces scores between the trusted and noise cutoffs for a well-described NifA homolog in Aquifex aeolicus (which lacks nitrogenase), for transcriptional activators of alternative nitrogenases (VFe or FeFe instead of MoFe), and truncated forms. [Central intermediary metabolism, Nitrogen fixation, Regulatory functions, DNA interactions].	1.56523e-159
NC_014834.1\|WP_013502821.1\|3332021_3333407_+\|Fe-only-nitrogenase-subunit-beta	gnl\|CDD\|131977	TIGR02931, Nitrogenase_iron-iron_protein_beta_chain, Fe-only nitrogenase, beta subunit. Nitrogenase is the enzyme of biological nitrogen fixation. The most wide-spread and most efficient nitrogenase contains a molybdenum cofactor. This protein family, AnfK, represents the beta subunit of the iron-only alternative nitrogenase. It is homologous to NifK and VnfK, of the molybdenum-containing and the vanadium (V)-containing types, respectively. [Central intermediary metabolism, Nitrogen fixation].	0
NC_014834.1\|WP_013502820.1\|3331567_3332008_+\|Fe-only-nitrogenase-subunit-delta	gnl\|CDD\|376996	pfam03139, AnfG_VnfG, Vanadium/alternative nitrogenase delta subunit. The nitrogenase complex EC:1.18.6.1 catalyzes the conversion of molecular nitrogen to ammonia (nitrogen fixation) as follows: 8 reduced ferredoxin + 8 H(+) + N(2) + 16 ATP <=> 8 oxidized ferredoxin + 2 NH(3) + 16 ADP + 16 phosphate. The complex is hexameric, consisting of 2 alpha, 2 beta, and 2 delta subunits. This family represents the delta subunit of a group of nitrogenases that do not utilize molybdenum (Mo) as a cofactor, but instead use either vanadium (V nitrogenases), or iron (alternative nitrogenases). V nitrogenases are encoded by vnf operons, and alternative nitrogenases by anf operons. The delta subunits are VnfG and AnfG, respectively.	9.85951e-68
NC_014834.1\|WP_013502811.1\|3317721_3318393_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.04521e-39
NC_014834.1\|WP_013502818.1\|3329109_3329937_+\|nitrogenase-iron-protein	gnl\|CDD\|183905	PRK13233, nifH, nitrogenase iron protein.	0
NC_014834.1\|WP_013502815.1\|3325760_3325952_+\|hypothetical-protein	gnl\|CDD\|379284	pfam13597, NRDD, Anaerobic ribonucleoside-triphosphate reductase.	7.81163e-10
NC_014834.1\|WP_013502812.1\|3318389_3319424_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_014834.1\|WP_013502805.1\|3308537_3309347_-\|NAD(+)--dinitrogen-reductase-ADP-D-ribosyltransferase	gnl\|CDD\|369330	pfam07357, DRAT, Dinitrogenase reductase ADP-ribosyltransferase (DRAT). This family consists of several bacterial dinitrogenase reductase ADP-ribosyltransferase (DRAT) proteins. Members of this family seem to be specific to Rhodospirillum, Rhodobacter and Azospirillum species. Dinitrogenase reductase ADP-ribosyl transferase (DRAT) carries out the transfer of the ADP-ribose from NAD to the Arg-101 residue of one subunit of the dinitrogenase reductase homodimer, resulting in inactivation of that enzyme. Dinitrogenase reductase-activating glycohydrolase (DRAG) removes the ADP-ribose group attached to dinitrogenase reductase, thus restoring nitrogenase activity. The DRAT-DRAG system negatively regulates nitrogenase activity in response to exogenous NH4+ or energy limitation in the form of a shift to darkness or to anaerobic conditions.	1.0429e-160
NC_014834.1\|WP_041807902.1\|3333489_3334182_+\|Fe-only-nitrogenase-accessory-protein-AnfO	gnl\|CDD\|274358	TIGR02940, conserved_hypothetical_protein, Fe-only nitrogenase accessory protein AnfO. Members of this protein family, called Anf1 in Rhodobacter capsulatus and AnfO in Azotobacter vinelandii, are found only in species with the Fe-only nitrogenase and are encoded immediately downstream of the structural genes in the above named species.	1.03685e-106
NC_014834.1\|WP_041807353.1\|3313705_3314401_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.99958e-110
NC_014834.1\|WP_013502806.1\|3309500_3310505_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	1.39509e-21
NC_014834.1\|WP_013502804.1\|3307635_3308526_-\|ADP-ribosyl-[dinitrogen-reductase]-hydrolase	gnl\|CDD\|131710	TIGR02662, ADP-ribosyl-_glycohydrolase, ADP-ribosyl-[dinitrogen reductase] hydrolase. Members of this family are the enzyme ADP-ribosyl-[dinitrogen reductase] hydrolase (EC 3.2.2.24), better known as Dinitrogenase Reductase Activating Glycohydrolase, DRAG. This enzyme reverses a regulatory inactivation of dinitrogen reductase caused by the action of NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37) (DRAT). This enzyme is restricted to nitrogen-fixing bacteria and belongs to the larger family of ADP-ribosylglycohydrolases described by pfam03747. [Central intermediary metabolism, Nitrogen fixation].	2.88517e-141
NC_014834.1\|WP_013502819.1\|3329986_3331555_+\|nitrogenase-iron-iron-protein,-alpha-chain	gnl\|CDD\|130920	TIGR01861, Nitrogenase_iron-iron_protein_alpha_chain, nitrogenase iron-iron protein, alpha chain. This model represents the all-iron variant of the nitrogenase component I alpha chain. Molybdenum-iron and vanadium iron forms are also found. The complete complex contains two alpha chains, two beta chains and two delta chains. The component I associates with component II also known as the iron protein which serves to provide electrons for component I. [Central intermediary metabolism, Nitrogen fixation].	0
NC_014834.1\|WP_013502814.1\|3323721_3325743_+\|ribonucleoside-triphosphate-reductase	gnl\|CDD\|236212	PRK08270, PRK08270, ribonucleoside triphosphate reductase.	0

>NC_014834.1|WP_013502813.1|3319544_3319835_+|CRISPR-associated-endonuclease-Cas2
MLVLVTYDVRTSEPGGQARLRRVARACQDYGQRVQYSVFEIEVDPAQWTALRARLESLIAPKHDSLRYYYLGANWRRRVEHVGAKPATDFGEPLIV
>NC_014834.1|WP_013502812.1|3318389_3319424_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYVTTEGASLRKDGENLVAEVESEERARVPFHMLASVVVFGGVYVSPPLIQALAARGITIVLLDRAGRFQARIEGPVSGNVLLRRAQYRVSERPTDIVRSFVSAKIANQRTVLQRSLRDYGEEMAVGLRSRIEAVVDRLAGILRRVGMTDLDVEALRGAEGEAAFGYFSVFGSLIRVTDPEMQFGGRSRRPPRDAVNAVLSFIYVLLTHDCRSAAEAVGLDPAVGFLHRDRPGRPSLALDLMEELRPVLADRLALSLINRRQLRPRDFETQDGGATLLTDDGRRTVLTAWQDRKKEERQHPFLGETAQLGLVPYLQAQLLSRHLRGDLDAYPPYIWK
>NC_014834.1|WP_013502811.1|3317721_3318393_+|CRISPR-associated-protein-Cas4
MPAVAAPELDEPIPLSALQHAVYCLRQAALIHIERMWEENRFTAEGRVLHDTVHEAADHRRGAVRRVSAMPLACRRLNLAGTADLVEFRDGPDGETPFPVEYKRGKAKLHRADEVQLCAQALCLEEMTGRTVPEGALFYATTRRRVGVPFDAELRRLTEQVACDFAALIAAGVTPPASYRADRCNACSLIELCRPKLARTSAAEFRQRAIAASLADASGGELP
>NC_014834.1|WP_013502810.1|3316750_3317704_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSPLANRYDIVFLFDVTRGNPNGDPDAGNLPRIDPETNFGLVTDVSLKRKIRNYTELAKGDQPGYRIYVQEGSILNEKHREPYKAIRGDTDKVAKAEKLNPQNDDEARAITKFMCDNFYDVRSFGAVMSTGINAGQVRGPVQVTFATSIEPILPLEISITRMAATNAKEKAERDKAGGDDERTENRTMGRKHIVPYGLYRAHIFVNAKLAERTGFSQDDLDHLFTSLSVMFEHDRSAARGEMVSRRGIAFKHASALGNAHAQALFDRVEIWRRVGEDLIKPGDSRLDNYKPARQYADYEVTIKRDGLPDGIEVVELF
>NC_014834.1|WP_013502809.1|3314993_3316754_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MTALAALVRAYDRMAQRGEVPPFGYSQQNIAFVIPLNADGTVAGAPIDLRLGEGRKKTARQLTVPQPIKRTSGVAPNFLWDKTAYVLGITAGEGKRTAQEHQAFRDQHQAWLAGTTDEGLQALLRFLEAWTPERFAEWGWSDEIKDQNVVFALETERLHNVYLHDRPAARALWARLMAGSDKTEAICLVSGERAPLARLHPAIKGVWGAQSSGASIVSFNLDAFTSYGHDQGANAPISEAAAFAYTSVLNRFLDRGSGHRIQVGDASTVFWAEASDRASADTAEQMFASLFAVDENTESKKVGAILEKVAQGRPISDLKPDLPPGVRFYVLGLAPNAARLSVRFYVEDDFDVIAVRYLRHLARLRIDPPPREPSPSLWRYLIETAVLRKSENIPPNLAGDWLRAILTDTPYPLTLLSSLIMRLRADHDVSALRVGLMKSILIRNFGMENTPVALDLNCKDQGYLLGRLFAVYEQIQTAALGRNVNATIRDKFYGAAAAQPRKVFALLAAGAGNHLSKIGKLRPGHRVNLEKDVGSVMDMMEPDSDPFPASLSDKSQALFALGYYHQRNKYFRTSESPDTAAPEIAA
>NC_014834.1|WP_041807353.1|3313705_3314401_+|type-I-C-CRISPR-associated-protein-Cas5
MAYGIRLRVAGRWALFTRPEMKVERVSYDVMTPSAARGILEAIHWKPAIRWVIDEIHVLKPIRFQSIRRNEVGAKAPVASIRKAMKSGDIGDLALIVEDNRQQRAATLLSDVDYVICAHFEMTAKAGPDDNEAKHLDTFNRRARKGQSFHQPCLGAREFPASFALLEPDQALPQPDNQDRTAALGFGTPRDLGFMLYDINHGGDRGSILFRATLVDGVVKVPPPGSPELRR
>NC_014834.1|WP_013502807.1|3311283_3313602_+|CRISPR-associated-helicase/endonuclease-Cas3
MHFAHSTPTSEDDWEPLPRHLHEVAKLARQFGAKFGGGNAAEIAGRLHDLGKYSAAFQHYLRGQRPRGVDHATAGAQEVVKLGTGINGLIARLLACGIAGHHGGLPDPLGAGSLDDRLKKSVEPLDPIWRSEVACEASPLMPAPFELYKGAQQPGPPRQAFQFAFLGRMLFSCLVDADFLCTEAFYAAVEGRPVDRDWPRLPQIVDGLIARFDGYMADKQQRARHGQLNTLRRDILAHVRSKAELPRGVFTLNVPTGGGKTLASLAFALNHAKRHQMDRIIYAIPFTAIIEQTAGVFRDAIGDETLLEHHSAIELDALDIKADNGEARGIDDGARDGKLRLAAENWAAPVIVTTNVQLFESLFANRTSRCRKLHNLANAVIVLDEAQTIPRNVLLPCIAALDELARNYGCTVVLCTATQPALGADRFTGGLQLSPDSELAPNPEQLHTALRRTTQRLAGEWSDDQLLDDIAQSGSAQALVIVNSRRHARALYEAGKRRAVEGLLHLTTRQIPADRRAILAEIRQRLANDAPCVVIATSLVEAGVDLDFPRVWRAEAGLDQLAQAAGRCNREGRAPADVSIVTIFKPAAAEPPPEIHGLVGDTYRILENHEGDLFSPEAMEAYFNEVYWRLQDGLDRIHIPDADGRKVPAKTMDQFTVSAGQPHFAYRTVGEAFRLIESGMAPVIVPTDAEALDTLAALRGGLPPVVAARRLRHYLVQVPPRERERMIANGHVRYFTAERFGEQFAVLETASLYSAEIGLRWEDADEFTWAIV
>NC_014834.1|WP_013502806.1|3309500_3310505_-|AraC-family-transcriptional-regulator
MRHPEFDVRLNADPIDYPLNRAPVVHTRDPEAMREAMLSVYGASEFTAEADGFEGFGSYVAFDGAGLGFCAYAAPAVAEFGETDFARVQIALRGSGRTSTGSSCVEVDPQHWCVSSAGTPARLEFGADYQQLILRITTATLTATLEALLGVTPRGKLTFAPGVNVEHRGAPALRDLAICVARHVDPVAPALPPFMLREMQQALAVSFLSVTRHNFSAQLDSDARDTAPDYVRVAEEFIEASWNRAITIVDLAAVTNVGVRSLFKAFQKHRGYSPMAFAKAVRLNKARELLLSGDPSRSVTAVAFACGFTNLGHFANDYRRRHGELPSETLARRR
>NC_014834.1|WP_013502805.1|3308537_3309347_-|NAD(+)--dinitrogen-reductase-ADP-D-ribosyltransferase
MSDDGSIGHSSNLVGVPMRFLTGVGFNDAPVPLHIAGVREMNPSLFEMLGEARDLAEAGEAFACYMTALFGIDAEQRVRGRDGRRRFRSSYLDLIKGWGFDSNGAEGAVLKGWVESRFGLFPTFHKEPIRRIASPVWTVYVEQKMSSRFHNNAIFVQLDLLYEFCQWALTHFAATGSTHVTLYRGVNGFDEHQVVERLDKRHSIIRLNNLTSFTSDRGIADCFGDTILTVRVPVPKILFFNRLLRAHPLKGEGEYLVIGGDYRVTASYF
>NC_014834.1|WP_013502804.1|3307635_3308526_-|ADP-ribosyl-[dinitrogen-reductase]-hydrolase
MTSQSLQDRALAAYLGFAVGDALGATVEFMTKSEIAARYGVHKDITGGGWLRLRPGQVTDDTEMALALGRSLIRCGGLALPDLCDEFAAWLKTGPVDVGSTCRRGIRRYITTGELQGAYFEGDAGNGAAMRILPLALATYGRAEQAAAWTIAQAHVTHHHPLSDAAALALVKMLQALLAGEGQSAASVIADDLVQAHRIFGFTPYRGPATAYVVDTLRTVLHYYFSTDSFVDCVISTVNQGDDADTTGALAGMLAGATYGLAAIPKRWLDRLDREVVTAIRGQVPKLLELAASAPR
>NC_014834.1|WP_013502814.1|3323721_3325743_+|ribonucleoside-triphosphate-reductase
MPVSDLTNLPRTIIKRSGAEAAFDSTKIRSAIARAGQATGAFGELEAGLLTSQSVKVIAHRFAGAVPQIEQVQDIVEQVLISANHLTTARAYIVYREKRSQARSDRKVAVDAIASINEYLDRTDWRVNANANQGYSLGGLILNLSGKVVANYWLSHVYPSEVGRAHRDGDLHIHDLDMLSGYCAGWSLRTLLTEGLNGVPGKVEASPPKHLSSAIGQIVNFLGTLQNEWAGAQAFSSFDTYLAPFLRKDRLSYADVLQGIQELVYNLNVPSRWGTQTPFTNLTFDWTCPEDLRDEVPVIGGEEMDFTYGELQPEMDMINRAYMEIMTKGDAKGRVFTFPIPTYNITPDFPWDSENAERLFEMTAKYGLPYFQNFLNSELKPHMIRSMCCRLQLDLTELLKRGNGLFGSAEQTGSIGVVTINCARLGHLHRGDEAGLLRALDALLDIARTSLEIKRKVVQRYMDDGLFPYSKRYLGTLRNHFSTVGINGVNEMIRNFTADCETIATPWGHGFAVRVLDHVRARIVAFQEQTGNLYNLEATPAEGTTYRFAKEDRKRFPGILQAGTEDNPYYTNSSQLPVGFTDDPFEALERQDDLQRKYTGGTVLHLYMGSKLSSGEACKKLVRRALENFRLPYVTVTPTFSICPTHGYIEGEHAFCPKCDAERLAAKRLAANH
>NC_014834.1|WP_013502815.1|3325760_3325952_+|hypothetical-protein
MNAHVTIPTTPNEAIELTDAERQPCEIWTRVMGYHRPVASFNRGKIGEFNDRKYFTEARAKLG
>NC_014834.1|WP_013502816.1|3325908_3326541_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MTASTSPKPAPSSAELRIGGLVRLSTCDWPGELVATVFCQGCPWQCGYCHNPHLLPARGPDQLAWQDVFAFLETRRGLLDGVVFSGGEPTLQSDLPLAIAAVRSLGFRIGLHTAGPYPERLARVLPLLDWIGFDVKAPFAEYDRITGVAGSGDGARASLALVLGSGVSCDLRTTVHPDLLDASALERLSADLGSLGAERTRVQPFRSVAS
>NC_014834.1|WP_013502817.1|3326956_3328582_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MTALDVDRHAEPEGLVDEFTHCFTGECRVNVLQILFRINQVLTQNADLATLVSIVLDGMRQQMRMQRGVMMLYDHRSDAIFIHDSFGLTDEEKGRGIYAPGEGITGKVVETGKPIIIPRVIDNPDFLDRTRAHNKGRKQDKLAFFCVPIVLAQKVLGTICAERVYMNQRLLKQDAELLAMVASLIAPAVELYLIENVDKVRLEAENRRLKSELKQRFRPANIIGNSKPMQDVYAMVHKVASTKATVLLLGESGVGKELVASALHYNSPVADGPFIKANCAALPEALAESELFGHERGAFTSAIATHKGYFEQASGGTIFLDEVGELSLPTQAKLLRVLQERTFERVGGARSVKVDVRIIAATNRNLAEMVAAGTFREDLFYRLNVFPITIPPLRDRGSDVITLADHFVTTYSAEIGKPIRRISTPAINMLMSYHWPGNVRELENVIERSVILAEEGVIHGYDLPPSLQTPTETGTGFSGTLEDRVTAVEYEMIVEALKASNGNVGHAATALGLTRRMLGLRMDRHGLTYKTFRTAGLRPRS
>NC_014834.1|WP_013502818.1|3329109_3329937_+|nitrogenase-iron-protein
MTRKVAIYGKGGIGKSTTTQNTAAALAFYHDKNIFIHGCDPKADSTRLILGGKPQDTVMDTLRTLGAEKVTLENVVKSGFKDIRCVESGGPEPGVGCAGRGVITAIDLMEANQAYTDDLDFIFFDVLGDVVCGGFAMPIRDGKAQEVYVVASGEMMAIYAANNICKGLVKYAKQSGVRLGGIICNSRKVDGEREFLEEFTAAIGTKMIHFVPRDNIVQKAEFNKKTVTEFDPEADQALEYKQLGSAIIDNKDFVIPKPLTMDELEKMVVKYGLMD
>NC_014834.1|WP_013502819.1|3329986_3331555_+|nitrogenase-iron-iron-protein,-alpha-chain
MPYHEFDCSKCLPERKKHAVTKGTGDNLATALPLGYLNTIPGSISERGCAYCGAKHVIGTPMKDVIHMSHGPVGCTYDTWQTKRYISDNNNFQLKYTFATDVREKHIVFGAEGLLKQNIIEAFKACPDIKRMTIYQTCATALIGDDINAVAAEVMEEMPDVDIFTCNSPGFGGPSQSGGHHKINIAWINDKVGTVEPEITSDYVINYVGEYNIQGDQEVMLDYFTRMGIQVLSTFTGNGTYDGLRAMHRAHLNVLECARSAEYICNELRVRYGIPRLDIDGFGFEPLSQSLRKIGMFFGIEDRAEAIIAEETARWKPELDWYKERLKGKKVCLWPGGSKLWHWAHVIEEEMGVKVVSVYTKFGHQGDMEKGIARCGEDALAIDDPNELEGLEALEKLQPDIIFTGKRPGEVAKKVRVPYLNAHAYHNGPYKGFEGWVRFARDIYNGIYSPMHQLSGLDISKDEIPTDRGFVTQRMLSDAHLPEEIAKSESLRRYTGKDDIIADLRKKNPPYFTPIIKAKAAE
>NC_014834.1|WP_013502820.1|3331567_3332008_+|Fe-only-nitrogenase-subunit-delta
MTKITYKVTSEHPFPADAAAAAASLAAYEALDDVTKARVDQMVDWVMKNCLWQFHSRTWDRKRQNEGILGIAAKLLAGEPFTPQTPEDRCYWVDSVTLQRAYQATCPWLAEMSKEDIKALMKELHARIDYLTVTGSLNEELTDKHY
>NC_014834.1|WP_013502821.1|3332021_3333407_+|Fe-only-nitrogenase-subunit-beta
MNCQFKPKDRIGTINPIFTCQPAGAQYASIGIKDCIGIVHGGQGCVMFVRLLISQHLKESFEIASSSVHEDGAVFGALDRVEEAVDVLLMRYPHVKVVPIIITCSTEVIGDDVDGVVTKLQEELLDVKYPDREVHLIPIHCPSFVGSMATGYDVAVRDFVKHFSKKDKPSLKINLITGWVNPGDVKELKHLLAEMQVEANVLFEIESFDSPLMPDKSAVSHGSTTIAELTATADAQGTIALNRYEGGAAATWLQTRWDVPAVIGPTPIGIRNTDTFLRNVKDMTGKPIPESLVKERGVALDAITDLAHMFLADKKVAIYGNPDLVLGLAEYCLDLGMKPVLLLLGDENAGYANDPRIAALKANVDYPMEIITNADLFELEDRIKNGLELDLILGHSKGRFVAIDYNIPMLRVGFPTYDRAGLYRYPVVGYAGATWLAEQMANTLFGDMEVKKNREWILNVW
>NC_014834.1|WP_041807902.1|3333489_3334182_+|Fe-only-nitrogenase-accessory-protein-AnfO
MKIAAYVDAEGEITKVSDKGVILLFEQHGEVWKVRKTIRFAVRPDDGLAQIHASLAAMVPELEDCRLFLSRSVRGVVNSLLQEMGVQTWQSHGPLFAQLETIARKENERAQQSTKASRAERRSRRRRHRQGGADSDLDEIKPVLIGDDDSGHFRLDLVRLLQDDPGLNSWDILIPFLTGTPFRQLDLVCDHIPRWFSRAMRALDMDAEIMELPGLSVAATITPKQQAEAT
>NC_014834.1|WP_013502823.1|3334178_3334769_+|gamma-glutamylcyclotransferase
MTPTLTTPLPTAPRAKPARRPTTLLFAYGATLNPEHIMVRLCQPKIRAIARLPDYRLGFHGHSAVWDSGLETLVDEPVAEVWGVVYELSATELDRFDAWQGVKLDGGGSYFHYPVEVIDASGQVLDALFHRKTEMGPQQPPSRDYLDFILAGARTRGLPAQAMTALEACPSVQARYPVPKMNTDIKALASKLSCAC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_014834_1	1.28\|3321839\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321839-3321871	33	NC_014834.1	2713904-2713936	1	0.97

1. spacer 1.28|3321839|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to position: 2713904-2713936, mismatch: 1, identity: 0.97

ctccgcgcggtcaacggcgtcgacaccccgctg	CRISPR spacer
ctccgcgcggtcaacggcgtcgacgccccgctg	Protospacer
************************.********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP029832	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence	565740-565772	4	0.879
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	47218-47251	5	0.853
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	1000923-1000955	5	0.848
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	213344-213376	5	0.848
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	63195-63227	5	0.848
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	498968-499000	5	0.848
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	651676-651708	5	0.848
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	229225-229257	5	0.848
NC_014834_1	1.22\|3321443\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321443-3321477	35	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	537702-537736	6	0.829
NC_014834_1	1.25\|3321641\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321641-3321673	33	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1159488-1159520	6	0.818
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013635	Rhizobium sp. N324 plasmid pRspN324e, complete sequence	607499-607532	6	0.824
NC_014834_1	1.29\|3321904\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321904-3321937	34	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	55006-55039	6	0.824
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	290140-290172	6	0.818
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	45686-45719	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	45686-45719	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	45265-45298	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	45684-45717	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	48567-48600	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	46875-46908	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	45690-45723	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	459668-459701	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	45445-45478	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	48558-48591	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	45686-45719	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	46875-46908	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	48567-48600	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	410372-410405	7	0.794
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	811078-811111	7	0.794
NC_014834_1	1.28\|3321839\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321839-3321871	33	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	217193-217225	7	0.788
NC_014834_1	1.28\|3321839\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321839-3321871	33	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	54424-54456	7	0.788
NC_014834_1	1.28\|3321839\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321839-3321871	33	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	112979-113011	7	0.788
NC_014834_1	1.28\|3321839\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321839-3321871	33	NC_023607	Mycobacterium phage 40AC, complete genome	14584-14616	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP032313	Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence	52244-52276	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP020372	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence	59076-59108	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	388823-388855	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	388821-388853	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP010590	Phaeobacter gallaeciensis strain P11 plasmid pP11_b, complete sequence	52917-52949	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	80565-80597	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP010675	Phaeobacter gallaeciensis strain P75 plasmid pP75_b, complete sequence	49427-49459	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NC_023148	Phaeobacter gallaeciensis DSM 26640 plasmid pGal_B134, complete sequence	53008-53040	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP010791	Phaeobacter gallaeciensis strain P63 plasmid pP63_x_draft, complete sequence	49427-49459	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP010631	Phaeobacter inhibens strain P78 plasmid pP78_b, complete sequence	49427-49459	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP010619	Phaeobacter inhibens strain P30 isolate M4-3.1A plasmid pP30_b, complete sequence	91624-91656	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP010861	Marinovum algicola DG 898 plasmid pMaD6, complete sequence	67374-67406	7	0.788
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP010638	Phaeobacter gallaeciensis strain P73 plasmid pP73_b, complete sequence	49427-49459	7	0.788
NC_014834_1	1.40\|3322634\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322634-3322666	33	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	222710-222742	7	0.788
NC_014834_1	1.40\|3322634\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322634-3322666	33	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	12708-12740	7	0.788
NC_014834_1	1.44\|3322897\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322897-3322930	34	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	44036-44069	7	0.794
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	MG812490	Mycobacterium phage Holeinone, complete genome	23992-24025	7	0.794
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	MN813678	Mycobacterium phage Lephleur, complete genome	24010-24043	7	0.794
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	KM101117	Mycobacterium phage LizLemon, complete genome	24117-24150	7	0.794
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	NC_043767	Mycobacterium virus TA17a, complete genome	23991-24024	7	0.794
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	MG812491	Mycobacterium phage ItsyBitsy1, complete genome	23991-24024	7	0.794
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	KR997932	Mycobacterium phage Godines, complete genome	24010-24043	7	0.794
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	KX443696	Mycobacterium phage Laurie, complete genome	24004-24037	7	0.794
NC_014834_1	1.15\|3320977\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320977-3321010	34	AY579221	Vibrio harveyi bacteriophage 1 PH108-3-125(-), PH108-3-56, PH108-3-201, PH108-3-183(-), PH108-3-150(-), PH108-3-94(-), PH108-3-87(-), and PH108-3-99(-) genes, complete cds	4331-4364	8	0.765
NC_014834_1	1.19\|3321243\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321243-3321277	35	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	757576-757610	8	0.771
NC_014834_1	1.19\|3321243\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321243-3321277	35	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	295347-295381	8	0.771
NC_014834_1	1.19\|3321243\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321243-3321277	35	CP021183	Sphingomonas wittichii DC-6 plasmid pDC02, complete sequence	89527-89561	8	0.771
NC_014834_1	1.25\|3321641\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321641-3321673	33	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1372521-1372553	8	0.758
NC_014834_1	1.28\|3321839\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321839-3321871	33	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1295789-1295821	8	0.758
NC_014834_1	1.29\|3321904\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321904-3321937	34	NZ_CP041205	Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence	20339-20372	8	0.765
NC_014834_1	1.29\|3321904\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321904-3321937	34	NZ_CP025809	Sulfitobacter sp. SK025 plasmid unnamed1, complete sequence	213581-213614	8	0.765
NC_014834_1	1.29\|3321904\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321904-3321937	34	NZ_CP022750	Sphingobium hydrophobicum strain C1 plasmid p4, complete sequence	53833-53866	8	0.765
NC_014834_1	1.31\|3322037\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322037-3322071	35	NZ_CP010326	Pantoea sp. PSNIH1 plasmid pPSP-3a9, complete sequence	96560-96594	8	0.771
NC_014834_1	1.34\|3322236\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322236-3322270	35	CP036360	Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence	44864-44898	8	0.771
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1369407-1369439	8	0.758
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	CP042595	Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence	229923-229955	8	0.758
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP045303	Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence	69716-69748	8	0.758
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP021821	Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence	319802-319834	8	0.758
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	MK310138	Mycobacterium phage Shaobing, complete genome	56071-56103	8	0.758
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	MF185722	Mycobacterium phage Peanam, complete genome	56003-56035	8	0.758
NC_014834_1	1.43\|3322830\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322830-3322864	35	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	644431-644465	8	0.771
NC_014834_1	1.1\|3320050\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320050-3320083	34	MH153804	Rhodococcus phage Jace, complete genome	41371-41404	9	0.735
NC_014834_1	1.4\|3320248\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320248-3320281	34	NZ_CP013345	Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence	319755-319788	9	0.735
NC_014834_1	1.4\|3320248\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320248-3320281	34	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	99452-99485	9	0.735
NC_014834_1	1.9\|3320582\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320582-3320614	33	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	103238-103270	9	0.727
NC_014834_1	1.10\|3320647\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320647-3320679	33	NZ_CP049031	Fluviibacterium aquatile strain SC52 plasmid pSC52_3, complete sequence	73663-73695	9	0.727
NC_014834_1	1.14\|3320911\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320911-3320944	34	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	494712-494745	9	0.735
NC_014834_1	1.14\|3320911\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320911-3320944	34	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	238562-238595	9	0.735
NC_014834_1	1.14\|3320911\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320911-3320944	34	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	75793-75826	9	0.735
NC_014834_1	1.14\|3320911\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320911-3320944	34	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	134348-134381	9	0.735
NC_014834_1	1.23\|3321510\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321510-3321542	33	NZ_KY126370	Enterobacter cloacae subsp. cloacae strain MN201516 plasmid pOP-I, complete sequence	75519-75551	9	0.727
NC_014834_1	1.23\|3321510\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321510-3321542	33	NZ_CP011630	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-49, complete sequence	43348-43380	9	0.727
NC_014834_1	1.23\|3321510\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321510-3321542	33	NC_020308	Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 plasmid pCFSAN001992_2, complete sequence	16753-16785	9	0.727
NC_014834_1	1.25\|3321641\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321641-3321673	33	NZ_LR134452	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence	367276-367308	9	0.727
NC_014834_1	1.27\|3321772\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321772-3321806	35	MK496050	Pseudomonas sp. strain FFUP_PS_41 plasmid pJBCL41, complete sequence	334203-334237	9	0.743
NC_014834_1	1.28\|3321839\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321839-3321871	33	NZ_CP045122	Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence	148125-148157	9	0.727
NC_014834_1	1.28\|3321839\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321839-3321871	33	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	821707-821739	9	0.727
NC_014834_1	1.28\|3321839\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321839-3321871	33	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	780755-780787	9	0.727
NC_014834_1	1.29\|3321904\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321904-3321937	34	NZ_CP016293	Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence	145734-145767	9	0.735
NC_014834_1	1.29\|3321904\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321904-3321937	34	NZ_CP021832	Sinorhizobium meliloti strain HM006 plasmid accessoryA, complete sequence	126701-126734	9	0.735
NC_014834_1	1.30\|3321970\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321970-3322004	35	NZ_AP022338	Mameliella alba strain KU6B plasmid pKUB257, complete sequence	227227-227261	9	0.743
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1824556-1824588	9	0.727
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	118493-118525	9	0.727
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	809437-809469	9	0.727
NC_014834_1	1.38\|3322501\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322501-3322535	35	NZ_CP023158	Xanthomonas citri pv. malvacearum strain AR81009 plasmid unnamed3, complete sequence	16800-16834	9	0.743
NC_014834_1	1.39\|3322568\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322568-3322601	34	NC_041877	Pseudomonas phage SM1, complete genome	73918-73951	9	0.735
NC_014834_1	1.43\|3322830\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322830-3322864	35	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1691374-1691408	9	0.743
NC_014834_1	1.44\|3322897\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322897-3322930	34	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	14079-14112	9	0.735
NC_014834_1	1.46\|3323029\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3323029-3323063	35	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	556693-556727	9	0.743
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	NZ_CP015585	Roseomonas gilardii strain U14-5 plasmid 1, complete sequence	27757-27790	9	0.735
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	309212-309245	9	0.735
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	NZ_CP024587	Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence	24426-24459	9	0.735
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	289067-289100	9	0.735
NC_014834_1	1.14\|3320911\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320911-3320944	34	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	643567-643600	10	0.706
NC_014834_1	1.15\|3320977\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3320977-3321010	34	NZ_LR134463	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 21, complete sequence	99240-99273	10	0.706
NC_014834_1	1.17\|3321109\|36\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321109-3321144	36	NC_008308	Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence	148630-148665	10	0.722
NC_014834_1	1.21\|3321376\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321376-3321410	35	NZ_CP040820	Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence	194454-194488	10	0.714
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP041205	Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence	499764-499797	10	0.706
NC_014834_1	1.26\|3321706\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321706-3321739	34	NZ_CP032923	Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence	257670-257703	10	0.706
NC_014834_1	1.29\|3321904\|34\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321904-3321937	34	NC_019895	Singulisphaera acidiphila DSM 18658 plasmid pSINAC03, complete sequence	5187-5220	10	0.706
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	513775-513807	10	0.697
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4361533-4361565	10	0.697
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP040642	Agrobacterium sp. T29 plasmid unnamed2, complete sequence	37844-37876	10	0.697
NC_014834_1	1.35\|3322303\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322303-3322335	33	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	243635-243667	10	0.697
NC_014834_1	1.38\|3322501\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322501-3322535	35	LR606150	Rhizobium sp. Q54 genome assembly, plasmid: 7	69515-69549	10	0.714
NC_014834_1	1.43\|3322830\|35\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3322830-3322864	35	NZ_CP010727	Phaeobacter inhibens strain P88 plasmid pP88_b, complete sequence	91775-91809	10	0.714
NC_014834_1	1.25\|3321641\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321641-3321673	33	NZ_CP035419	Leisingera sp. NJS204 plasmid unnamed2, complete sequence	23211-23243	11	0.667
NC_014834_1	1.50\|3323295\|34\|NC_014834\|CRISPRCasFinder,CRT	3323295-3323328	34	NZ_CP013744	Streptomyces sp. CdTB01 plasmid unnamed, complete sequence	100998-101031	12	0.647

1. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.879

atcgcctc-cagcgcctcggcgacgcccatcagc	CRISPR spacer
-ccgccccacagcgcctcggcgacgcccagcagc	Protospacer
 .****.* ******************** ****

2. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 5, identity: 0.853

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcaatcggtcgggcttaa-gcctgaagcgc	Protospacer
************ ******* ** * ***.****

3. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.848

atcgcctccagcgcctcggcgacgc-ccatcagc	CRISPR spacer
atcgcctccatcgcctcggcggcgcgcgagcag-	Protospacer
********** **********.*** * * ***

4. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 5, identity: 0.848

atcgcctc-cagcgcctcggcgacgcccatcagc	CRISPR spacer
-ccgccccacatcgcctcggcgacgcccagcagc	Protospacer
 .****.* ** ***************** ****

5. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 5, identity: 0.848

atcgcctc-cagcgcctcggcgacgcccatcagc	CRISPR spacer
-ccgccccacatcgcctcggcgacgcccagcagc	Protospacer
 .****.* ** ***************** ****

6. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 5, identity: 0.848

atcgcctc-cagcgcctcggcgacgcccatcagc	CRISPR spacer
-ccgccccacatcgcctcggcgacgcccagcagc	Protospacer
 .****.* ** ***************** ****

7. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 5, identity: 0.848

atcgcctc-cagcgcctcggcgacgcccatcagc	CRISPR spacer
-ccgccccacatcgcctcggcgacgcccagcagc	Protospacer
 .****.* ** ***************** ****

8. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 5, identity: 0.848

atcgcctc-cagcgcctcggcgacgcccatcagc	CRISPR spacer
-ccgccccacatcgcctcggcgacgcccagcagc	Protospacer
 .****.* ** ***************** ****

9. spacer 1.22|3321443|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 6, identity: 0.829

gacatcgagatcgaggccgcggtctacgtcgtcac	CRISPR spacer
gacatcgacatcgaggccgcggcctacgacagccc	Protospacer
******** *************.***** *. * *

10. spacer 1.25|3321641|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 6, identity: 0.818

-ctgcgcggcctggaggcggcggcagaatttgtc	CRISPR spacer
gccgc-cggcatagaggcggcggcagaattcggc	Protospacer
 *.** **** *.*****************.* *

11. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013635 (Rhizobium sp. N324 plasmid pRspN324e, complete sequence) position: , mismatch: 6, identity: 0.824

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcaatcggtcgggctgaa-gcccgaggcgc	Protospacer
************ ********** * *.*..***

12. spacer 1.29|3321904|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.824

----acggcgacgcagacgctgacgccggagcagcagg	CRISPR spacer
ttccgcggc----cagacgctgaccccggagcagcagg	Protospacer
    .****    *********** *************

13. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.818

atcgc-ctccagcgcctcggcgacgcccatcagc	CRISPR spacer
-ccgctttccagcgcctcggcgaagccgatcacc	Protospacer
 .*** .**************** *** **** *

14. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

15. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

16. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

17. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

18. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

19. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

20. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

21. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctacaatcggtcgggctgaa-gcccgaggcgc	Protospacer
*****.****** ********** * *.*..***

22. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

23. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

24. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

25. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

26. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

27. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgctgcagtcggtcgggctgaa-gccggaggcgc	Protospacer
********.*** ********** * * *..***

28. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 7, identity: 0.794

ctgctgcaatcgttcgggctgaaggactggagcg-	CRISPR spacer
ctgttgcaatcggtcgggctgaa-gcccgaggcgc	Protospacer
***.******** ********** * *.*..***

29. spacer 1.28|3321839|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.788

ctccgcgcggtcaacggcgtcgacaccccgctg	CRISPR spacer
ccccgcgtggtcaacggcgtcgccaccaatccg	Protospacer
*.*****.************** ****   *.*

30. spacer 1.28|3321839|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.788

ctccgcgcggtcaacggcgtcgacaccccgctg	CRISPR spacer
ccccgcgtggtcaacggcgtcgccaccaatccg	Protospacer
*.*****.************** ****   *.*

31. spacer 1.28|3321839|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.788

ctccgcgcggtcaacggcgtcgacaccccgctg	CRISPR spacer
ccccgcgtggtcaacggcgtcgccaccaatccg	Protospacer
*.*****.************** ****   *.*

32. spacer 1.28|3321839|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_023607 (Mycobacterium phage 40AC, complete genome) position: , mismatch: 7, identity: 0.788

ctccgcgcgg---tcaacggcgtcgacaccccgctg	CRISPR spacer
---agcgcggcgctcaacggcgtcgacagcccgttc	Protospacer
    ******   *************** ****.*

33. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032313 (Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
gaggcggccagcgcctcggcttcgcccatcagc	Protospacer
.  **  *************  ***********

34. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020372 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc-	CRISPR spacer
atcgcctccagggcctcggcgacg-atgttggcg	Protospacer
*********** ************  ..*..**

35. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
atacgcagcagcgcctcggcgaggcacatcagc	Protospacer
**   *  ************** ** *******

36. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
atacgcagcagcgcctcggcgaggcacatcagc	Protospacer
**   *  ************** ** *******

37. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010590 (Phaeobacter gallaeciensis strain P11 plasmid pP11_b, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc-	CRISPR spacer
agcgcctgcagcgcctcggcga-ggccgtgaacg	Protospacer
* ***** ************** * **.* *.*

38. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
ctggccttcagcgcctcggcgaggcccggcacc	Protospacer
 * ****.************** ****. ** *

39. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010675 (Phaeobacter gallaeciensis strain P75 plasmid pP75_b, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc-	CRISPR spacer
agcgcctgcagcgcctcggcga-ggccgtgaacg	Protospacer
* ***** ************** * **.* *.*

40. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_023148 (Phaeobacter gallaeciensis DSM 26640 plasmid pGal_B134, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc-	CRISPR spacer
agcgcctgcagcgcctcggcga-ggccgtgaacg	Protospacer
* ***** ************** * **.* *.*

41. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010791 (Phaeobacter gallaeciensis strain P63 plasmid pP63_x_draft, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc-	CRISPR spacer
agcgcctgcagcgcctcggcga-ggccgtgaacg	Protospacer
* ***** ************** * **.* *.*

42. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010631 (Phaeobacter inhibens strain P78 plasmid pP78_b, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc-	CRISPR spacer
agcgcctgcagcgcctcggcga-ggccgtgaacg	Protospacer
* ***** ************** * **.* *.*

43. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010619 (Phaeobacter inhibens strain P30 isolate M4-3.1A plasmid pP30_b, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc-	CRISPR spacer
agcgcctgcagcgcctcggcga-ggccgtgaacg	Protospacer
* ***** ************** * **.* *.*

44. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010861 (Marinovum algicola DG 898 plasmid pMaD6, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc-	CRISPR spacer
agcgcctgcagcgcctcggcga-ggccgtgaacg	Protospacer
* ***** ************** * **.* *.*

45. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010638 (Phaeobacter gallaeciensis strain P73 plasmid pP73_b, complete sequence) position: , mismatch: 7, identity: 0.788

atcgcctccagcgcctcggcgacgcccatcagc-	CRISPR spacer
agcgcctgcagcgcctcggcga-ggccgtgaacg	Protospacer
* ***** ************** * **.* *.*

46. spacer 1.40|3322634|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 7, identity: 0.788

cgctttgcgccgttcgccgagcgcgtggcgatg	CRISPR spacer
cgctatgccccgttcgccgagcgcatcggcaag	Protospacer
**** *** ***************.* *  * *

47. spacer 1.40|3322634|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 7, identity: 0.788

cgctttgcgccgttcgccgagcgcgtggcgatg-	CRISPR spacer
cgcgtcgcgccgttcgccgagcgc-cggcaagcc	Protospacer
*** *.****************** .***.*

48. spacer 1.44|3322897|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 7, identity: 0.794

acgtgtccgggcggcgcgtcgttccgctacgcgc-	CRISPR spacer
cggtgaccgggcggcgcgccgttccgatgc-cgcg	Protospacer
  *** ************.******* *.* ***

49. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to MG812490 (Mycobacterium phage Holeinone, complete genome) position: , mismatch: 7, identity: 0.794

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
aacttcaaggtgccgcagcccggcacgccaacgc	Protospacer
* * ********************.** ** *

50. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to MN813678 (Mycobacterium phage Lephleur, complete genome) position: , mismatch: 7, identity: 0.794

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
aacttcaaggtgccgcagcccggcacgccaacgc	Protospacer
* * ********************.** ** *

51. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to KM101117 (Mycobacterium phage LizLemon, complete genome) position: , mismatch: 7, identity: 0.794

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
aacttcaaggtgccgcagcccggcacgccaacgc	Protospacer
* * ********************.** ** *

52. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to NC_043767 (Mycobacterium virus TA17a, complete genome) position: , mismatch: 7, identity: 0.794

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
aacttcaaggtgccgcagcccggcacgccaacgc	Protospacer
* * ********************.** ** *

53. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to MG812491 (Mycobacterium phage ItsyBitsy1, complete genome) position: , mismatch: 7, identity: 0.794

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
aacttcaaggtgccgcagcccggcacgccaacgc	Protospacer
* * ********************.** ** *

54. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to KR997932 (Mycobacterium phage Godines, complete genome) position: , mismatch: 7, identity: 0.794

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
aacttcaaggtgccgcagcccggcacgccaacgc	Protospacer
* * ********************.** ** *

55. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to KX443696 (Mycobacterium phage Laurie, complete genome) position: , mismatch: 7, identity: 0.794

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
aacttcaaggtgccgcagcccggcacgccaacgc	Protospacer
* * ********************.** ** *

56. spacer 1.15|3320977|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to AY579221 (Vibrio harveyi bacteriophage 1 PH108-3-125(-), PH108-3-56, PH108-3-201, PH108-3-183(-), PH108-3-150(-), PH108-3-94(-), PH108-3-87(-), and PH108-3-99(-) genes, complete cds) position: , mismatch: 8, identity: 0.765

agcgtcgcgaagccggcgccgtgtgcgagccgcg	CRISPR spacer
accaacgcgaagccgacgccgtgcgcgaggcaag	Protospacer
* *. **********.*******.***** *. *

57. spacer 1.19|3321243|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 8, identity: 0.771

gtcggacatctgcgcgcgctcgcgcagctccgcct	CRISPR spacer
ttggcgcatctgcgcgcgctggcgcagcacctctt	Protospacer
 * * .************** ******* ** *.*

58. spacer 1.19|3321243|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 8, identity: 0.771

gtcggacatctgcgcgcgctcgcgcagctccgcct	CRISPR spacer
ctggcgcatctgcgcgcgctggcgcagcacctcgt	Protospacer
 * * .************** ******* ** * *

59. spacer 1.19|3321243|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to CP021183 (Sphingomonas wittichii DC-6 plasmid pDC02, complete sequence) position: , mismatch: 8, identity: 0.771

gtcggacatctgcgcgcgctcgcgcagctccgcct	CRISPR spacer
ctggcgcatctgcgcgcgctggcgcagcacctcgt	Protospacer
 * * .************** ******* ** * *

60. spacer 1.25|3321641|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ctgcgcggcctggaggcggcggcagaatttgtc	CRISPR spacer
cgtagcgccctggaggcggcggccgaattcgat	Protospacer
*   *** *************** *****.* .

61. spacer 1.28|3321839|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 8, identity: 0.758

ctccgcgcggtcaacggcgtcgacaccccgctg	CRISPR spacer
gtccgcgaggtcgacggcgtcgacacgatccag	Protospacer
 ****** ****.*************  . * *

62. spacer 1.29|3321904|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041205 (Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence) position: , mismatch: 8, identity: 0.765

acggcgacgcagacgctgacgccggagcagcagg	CRISPR spacer
acgccgacgcagatgctgacgccgatgcggatgc	Protospacer
*** *********.**********. **.*  *

63. spacer 1.29|3321904|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025809 (Sulfitobacter sp. SK025 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

acggcgacgcagacgctgacgccgg-agcagcagg	CRISPR spacer
gcggcgacgcaatcgctgacgccggcagcgttac-	Protospacer
.**********. ************ ***. .*

64. spacer 1.29|3321904|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022750 (Sphingobium hydrophobicum strain C1 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.765

-acggcgacgcagacgctgacgccggagcagcagg	CRISPR spacer
cgcgg-atcgcagacgatgacgcccgagcagcgcg	Protospacer
 .*** . ******** ******* *******. *

65. spacer 1.31|3322037|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010326 (Pantoea sp. PSNIH1 plasmid pPSP-3a9, complete sequence) position: , mismatch: 8, identity: 0.771

acgctgctgatagagctgctgcagcgccttgacgg	CRISPR spacer
acgctgctgaaatagctgctgcagcacttcaccgc	Protospacer
********** * ************.*.*.. **

66. spacer 1.34|3322236|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to CP036360 (Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence) position: , mismatch: 8, identity: 0.771

ctcggaatagaccgcggcgtcggcgacatcgcgga--	CRISPR spacer
tctggaatcgaccgcggcatcggcgaca--gccgatc	Protospacer
...***** *********.*********  ** **

67. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.758

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
ggcgcgtccaccgcctcggcgacgcccatgccg	Protospacer
. *** **** ******************

68. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to CP042595 (Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence) position: , mismatch: 8, identity: 0.758

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
accgccaccagcgcctcggcgtcgccccgggcc	Protospacer
*.**** ************** *****   . *

69. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045303 (Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

atcgcctccagcgcctcggcgacgc--ccatcagc	CRISPR spacer
gtcgcctccagcgcctcgtcgccgcgggcattg--	Protospacer
.***************** ** ***   ***..

70. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021821 (Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence) position: , mismatch: 8, identity: 0.758

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
gaggccttcagcgcctcggcgaggcccggcacc	Protospacer
.  ****.************** ****. ** *

71. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to MK310138 (Mycobacterium phage Shaobing, complete genome) position: , mismatch: 8, identity: 0.758

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
acgctcaccagcgcctcggcgtcgcgcatcacc	Protospacer
*.  .* ************** *** ***** *

72. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to MF185722 (Mycobacterium phage Peanam, complete genome) position: , mismatch: 8, identity: 0.758

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
acgctcaccagcgcctcggcgtcgcgcatcacc	Protospacer
*.  .* ************** *** ***** *

73. spacer 1.43|3322830|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 8, identity: 0.771

ttcggcgctgggcctgctggcagatcgctcgtgcc	CRISPR spacer
attggcgctgggcctgctggccgagcgcgccggca	Protospacer
 *.****************** ** *** *  **

74. spacer 1.1|3320050|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to MH153804 (Rhodococcus phage Jace, complete genome) position: , mismatch: 9, identity: 0.735

gtttaaactcgttgaggacgaacgtgcggcagct	CRISPR spacer
cgatgctgtcgttgacgacgaacgtgccgcagct	Protospacer
   *.   ******* *********** ******

75. spacer 1.4|3320248|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013345 (Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcgtcggcctcaccgtcgtccggccgaaaatct	CRISPR spacer
cttgtcggcctcaccgtcgaccggcgccacgacg	Protospacer
**.**************** *****   * . *

76. spacer 1.4|3320248|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcgtcggcctcaccgtcgtccggccgaaaatct	CRISPR spacer
ctcgtcggccgtaccgtcgtccggcggcgcgccc	Protospacer
********** .************* * . ..*.

77. spacer 1.9|3320582|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.727

cggcacaggccgaaactgacgcctcagcagatg	CRISPR spacer
catgaagcgcggaaactgacgcctccgcagatt	Protospacer
*.  * . ** ************** ******

78. spacer 1.10|3320647|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049031 (Fluviibacterium aquatile strain SC52 plasmid pSC52_3, complete sequence) position: , mismatch: 9, identity: 0.727

cccgcgcatccggaaacggctagaaccccccgc	CRISPR spacer
gaagcgcatccggaaacgcccagaacccagcaa	Protospacer
   *************** *.*******  *.

79. spacer 1.14|3320911|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 9, identity: 0.735

accgtga----ggtgatcggcaagccgtccgaacggta	CRISPR spacer
----tgatgcgggtgatcgggaagccgcccgaacgcct	Protospacer
    ***    ********* ******.******* .

80. spacer 1.14|3320911|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.735

accgtga----ggtgatcggcaagccgtccgaacggta	CRISPR spacer
----tgatgcgggtgatcgggaagccgcccgaacgcct	Protospacer
    ***    ********* ******.******* .

81. spacer 1.14|3320911|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.735

accgtga----ggtgatcggcaagccgtccgaacggta	CRISPR spacer
----tgatgcgggtgatcgggaagccgcccgaacgcct	Protospacer
    ***    ********* ******.******* .

82. spacer 1.14|3320911|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.735

accgtga----ggtgatcggcaagccgtccgaacggta	CRISPR spacer
----tgatgcgggtgatcgggaagccgcccgaacgcct	Protospacer
    ***    ********* ******.******* .

83. spacer 1.23|3321510|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY126370 (Enterobacter cloacae subsp. cloacae strain MN201516 plasmid pOP-I, complete sequence) position: , mismatch: 9, identity: 0.727

atgcctgcggtttgctgtccgcatcctgcttga	CRISPR spacer
acaatgtcagtttgctgtccgcactctgcttga	Protospacer
*.. .  *.**************..********

84. spacer 1.23|3321510|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011630 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-49, complete sequence) position: , mismatch: 9, identity: 0.727

atgcctgcggtttgctgtccgcatcctgcttga	CRISPR spacer
acaatgtcagtttgctgtccgcactctgcttga	Protospacer
*.. .  *.**************..********

85. spacer 1.23|3321510|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_020308 (Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 plasmid pCFSAN001992_2, complete sequence) position: , mismatch: 9, identity: 0.727

atgcctgcggtttgctgtccgcatcctgcttga	CRISPR spacer
acaatgtcagtttgctgtccgcactctgcttga	Protospacer
*.. .  *.**************..********

86. spacer 1.25|3321641|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134452 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence) position: , mismatch: 9, identity: 0.727

ctgcgcggcctggaggcggcggcagaatttgtc	CRISPR spacer
cggcgcgccctggaggcggcggcggacgggtcc	Protospacer
* ***** ***************.**     .*

87. spacer 1.27|3321772|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to MK496050 (Pseudomonas sp. strain FFUP_PS_41 plasmid pJBCL41, complete sequence) position: , mismatch: 9, identity: 0.743

atatagtcgtcgagtgcgccattgaattcaatcat	CRISPR spacer
atcagatcgtcgagtgcgcctttgagttcaagagt	Protospacer
**  ..************** ****.*****  .*

88. spacer 1.28|3321839|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045122 (Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ctccgcgcggtcaacggcgtcgacaccccgctg	CRISPR spacer
aaggtcgcggtcaccggcgtcgccaccccgcgc	Protospacer
     ******** ******** ********

89. spacer 1.28|3321839|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.727

ctccgcgcggtcaacggcgtcgacaccccgctg	CRISPR spacer
gtccgcgaggtcgacggcgtcgacacgatccaa	Protospacer
 ****** ****.*************  . * .

90. spacer 1.28|3321839|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 9, identity: 0.727

ctccgcgcggtcaacggcgtcgacaccccgctg	CRISPR spacer
gtccgcgaggtcgacggcgtcgacacgatccaa	Protospacer
 ****** ****.*************  . * .

91. spacer 1.29|3321904|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016293 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.735

acggcgacgcagacgctgacgccggagcagcagg	CRISPR spacer
tcggcgacggagacgctgacgcgggcaacgccgc	Protospacer
 ******** ************ ** .  ** *

92. spacer 1.29|3321904|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021832 (Sinorhizobium meliloti strain HM006 plasmid accessoryA, complete sequence) position: , mismatch: 9, identity: 0.735

acggcgacgcagacgctgacgccggagcagcagg	CRISPR spacer
aaaacctgggagaagctgacgccagagcagcagg	Protospacer
* ..*   * *** *********.**********

93. spacer 1.30|3321970|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022338 (Mameliella alba strain KU6B plasmid pKUB257, complete sequence) position: , mismatch: 9, identity: 0.743

atcggcgacgccaacgcggccagttcggcggaacg	CRISPR spacer
gtgtttgccggcgacgcggccagttcggcggaaca	Protospacer
.*   .* ** *.*********************.

94. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.727

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
atcgcctccagcgtctcggcaacgacggcaaag	Protospacer
*************.******.*** * .. *.

95. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.727

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
atcgcctccagcgtctcggtgacgtcttcgccc	Protospacer
*************.*****.****.*. .   *

96. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.727

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
atcgcctccagcgtctcggtgacgtcttcgccc	Protospacer
*************.*****.****.*. .   *

97. spacer 1.38|3322501|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023158 (Xanthomonas citri pv. malvacearum strain AR81009 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.743

ttcaattgcggcaccaacatcgtcaacggctcggc	CRISPR spacer
atcggcagcggcgcgaacatcgtcaacggctcgat	Protospacer
 **... *****.* ******************..

98. spacer 1.39|3322568|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_041877 (Pseudomonas phage SM1, complete genome) position: , mismatch: 9, identity: 0.735

aggatctcgtccgccttgccgatccggtactcgg	CRISPR spacer
gcaatctcgttcgccttgccggtccggaagatgg	Protospacer
. .*******.**********.***** *  .**

99. spacer 1.43|3322830|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 9, identity: 0.743

ttcggcgctgggcctgctggcagatcg----ctcgtgcc	CRISPR spacer
ctcggcgctcggcctgctggccgatcaaggcatcg----	Protospacer
.******** *********** ****.     ***

100. spacer 1.44|3322897|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 9, identity: 0.735

---acgtgtccgggcggcgcgtcgttccgctacgcgc	CRISPR spacer
ttcacacgc---ggcggcgcctcgttcggctacgcga	Protospacer
   **..*.   ******** ****** ********

101. spacer 1.46|3323029|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.743

cttggac-ggcgacttgctggtcagcgtgatgccga	CRISPR spacer
-gcgcacaggagacttgctggccagcgtgatgcaag	Protospacer
  .* ** ** **********.*********** ..

102. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to NZ_CP015585 (Roseomonas gilardii strain U14-5 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.735

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
agggtcacggtgccgcagaccggcgcgccggtct	Protospacer
*  **** ********** ******** *. .*

103. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 9, identity: 0.735

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
gccgcgcaggtgcggcagcgcggcgcggcacagc	Protospacer
.***.  ****** ***** ***********

104. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to NZ_CP024587 (Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.735

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
agggtcacggtgccgcagaccggcgcgccggtct	Protospacer
*  **** ********** ******** *. .*

105. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 9, identity: 0.735

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
gccgcgcaggtgcggcagcgcggcgcggcacagc	Protospacer
.***.  ****** ***** ***********

106. spacer 1.14|3320911|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.706

accgtgaggtgatcggcaagccgtccgaacggta	CRISPR spacer
tgatggaggtgatcgggaagccgcccgaacgcct	Protospacer
     *********** ******.******* .

107. spacer 1.15|3320977|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134463 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 21, complete sequence) position: , mismatch: 10, identity: 0.706

agcgtcgcgaagccggcgccgtgtgcgagccgcg	CRISPR spacer
ctcaccccgaagccggcgccgtcggcgagcccgt	Protospacer
  *..* ***************  *******

108. spacer 1.17|3321109|36|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_008308 (Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence) position: , mismatch: 10, identity: 0.722

ttcgtcggcgatctgacccgcgacctctgccacgtc	CRISPR spacer
gtcgtcgccaatctgacccgcgacctcaagggcaac	Protospacer
 ****** *.***************** .  .*. *

109. spacer 1.21|3321376|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 10, identity: 0.714

cagcacgccctggctgagtgcatgggcgatctcct	CRISPR spacer
cgcggcgccatggctgagcgcatgggcgatggcgg	Protospacer
*.  .**** ********.***********  *

110. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041205 (Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence) position: , mismatch: 10, identity: 0.706

ctgctgcaatcgttcgggctgaaggactggagcg	CRISPR spacer
gcgctgcaatcgtccgggctgacggatggtgtca	Protospacer
 .***********.******** ***. * . *.

111. spacer 1.26|3321706|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032923 (Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence) position: , mismatch: 10, identity: 0.706

ctgctgcaatcgttcgggctgaaggactggagcg	CRISPR spacer
gcgctgcaatcgtccgggctgacggatggtgtca	Protospacer
 .***********.******** ***. * . *.

112. spacer 1.29|3321904|34|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_019895 (Singulisphaera acidiphila DSM 18658 plasmid pSINAC03, complete sequence) position: , mismatch: 10, identity: 0.706

acggcgacgcagacgctgacgccggagcagcagg	CRISPR spacer
accgccacgcagacgctgacgccgatccgctcga	Protospacer
** ** ******************.  *. . *.

113. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 10, identity: 0.697

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
agcgcctccagcgtttcggcgacgccgggatag	Protospacer
* ***********..*********** .   .

114. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.697

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
ccgccctccagcgcctcggcgacccgcagcgcg	Protospacer
 .  ******************* * ** *.

115. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040642 (Agrobacterium sp. T29 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.697

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
gtgcggtccagcgcctcggcgacgacgatcttg	Protospacer
.*    ****************** * ***

116. spacer 1.35|3322303|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 10, identity: 0.697

atcgcctccagcgcctcggcgacgcccatcagc	CRISPR spacer
cactcctccatcgcctcgccgacgcccagagaa	Protospacer
  * ****** ******* *********  ..

117. spacer 1.38|3322501|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to LR606150 (Rhizobium sp. Q54 genome assembly, plasmid: 7) position: , mismatch: 10, identity: 0.714

ttcaattgcggcaccaacatcgtcaacggctcggc	CRISPR spacer
accggttgcggcaccaacatcgtcctcggctgctt	Protospacer
 .*..*******************  *****   .

118. spacer 1.43|3322830|35|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010727 (Phaeobacter inhibens strain P88 plasmid pP88_b, complete sequence) position: , mismatch: 10, identity: 0.714

ttcggcgctgggcctgctggcagatcgctcgtgcc	CRISPR spacer
ggcggcgctggacctgctggcagagcgaatgagga	Protospacer
  *********.************ **  .* *

119. spacer 1.25|3321641|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035419 (Leisingera sp. NJS204 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.667

ctgcgcggcctggaggcggcggcagaatttgtc	CRISPR spacer
ttgcgcggcctggagcctgcggcaggcacaaca	Protospacer
.************** * *******.  . ..

120. spacer 1.50|3323295|34|NC_014834|CRISPRCasFinder,CRT matches to NZ_CP013744 (Streptomyces sp. CdTB01 plasmid unnamed, complete sequence) position: , mismatch: 12, identity: 0.647

accgtcaaggtgccgcagcccggcgcggcacccg	CRISPR spacer
gtgatccaggtgccgcagcccggcgaggttgagc	Protospacer
.. .** ****************** **.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2648574 : 2706070

Leptospira_phage(11.76%)

terminase,integrase,transposase,protease

attL 2699995:2700013|attR 2703531:2703549

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111356645.1\|2648574_2649763_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.2e-47	42.8
WP_013502178.1\|2649923_2650784_-	toll/interleukin-1 receptor domain-containing protein	K7PLZ9	Enterobacterial_phage	1.6e-28	31.0
WP_150105258.1\|2650943_2651393_-	TIR domain-containing protein	NA	NA	NA	NA
WP_013502180.1\|2651447_2652323_-	DUF4231 domain-containing protein	NA	NA	NA	NA
WP_013502181.1\|2652728_2656502_-	vitamin B12-dependent ribonucleotide reductase	A0A1X9SGV9	Bradyrhizobium_phage	0.0e+00	55.5
WP_013502182.1\|2657167_2658067_+	DMT family transporter	NA	NA	NA	NA
WP_013502183.1\|2658173_2659163_+	hydroxyacid dehydrogenase	M1HBE3	Paramecium_bursaria_Chlorella_virus	4.6e-24	33.2
WP_013502184.1\|2659361_2660792_+	amidase	NA	NA	NA	NA
WP_013502185.1\|2660881_2661460_+	hypothetical protein	NA	NA	NA	NA
WP_013502186.1\|2661606_2662737_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
WP_013502187.1\|2662733_2663372_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_013502188.1\|2663368_2664652_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	3.9e-07	26.4
WP_013502189.1\|2664842_2665454_-	hypothetical protein	NA	NA	NA	NA
WP_013502190.1\|2665472_2666216_-	CerR family C-terminal domain-containing protein	NA	NA	NA	NA
WP_013502191.1\|2666378_2667788_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_011158515.1\|2667875_2668214_-	P-II family nitrogen regulator	NA	NA	NA	NA
WP_013502192.1\|2668617_2670117_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_013502193.1\|2670160_2671489_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_013502194.1\|2671870_2673229_+	trigger factor	NA	NA	NA	NA
WP_013502195.1\|2673538_2674177_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	8.9e-61	61.0
WP_013502196.1\|2674563_2675838_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	6.4e-135	58.5
WP_013502197.1\|2676156_2678589_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	7.0e-199	48.4
WP_041807257.1\|2678949_2681598_-	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	1.1e-14	34.9
WP_013502199.1\|2682105_2685246_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	8.9e-45	21.4
WP_013502200.1\|2685274_2686519_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_013502201.1\|2686664_2687918_-	peptidase T	NA	NA	NA	NA
WP_011158502.1\|2688214_2688526_-	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	6.3e-12	45.3
WP_013502202.1\|2688856_2689417_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_013502203.1\|2689413_2690706_-	hypothetical protein	NA	NA	NA	NA
WP_013502204.1\|2690698_2690986_-	hypothetical protein	NA	NA	NA	NA
WP_013502205.1\|2690996_2691332_-	hypothetical protein	NA	NA	NA	NA
WP_150105201.1\|2691328_2691592_-	hypothetical protein	NA	NA	NA	NA
WP_013502207.1\|2691621_2691897_-	hypothetical protein	NA	NA	NA	NA
WP_013502208.1\|2691893_2692130_-	hypothetical protein	NA	NA	NA	NA
WP_013502209.1\|2692132_2692333_-	hypothetical protein	NA	NA	NA	NA
WP_013502210.1\|2692338_2692797_-	helix-turn-helix transcriptional regulator	K4K6E9	Caulobacter_phage	2.3e-10	34.4
WP_013502211.1\|2692793_2693270_-	hypothetical protein	NA	NA	NA	NA
WP_013502212.1\|2693272_2693536_-	hypothetical protein	NA	NA	NA	NA
WP_013502213.1\|2693847_2694219_+	hypothetical protein	NA	NA	NA	NA
WP_013502214.1\|2694190_2694415_-	hypothetical protein	NA	NA	NA	NA
WP_013502215.1\|2694411_2694714_-	helix-turn-helix transcriptional regulator	Q8W6G7	Sinorhizobium_phage	1.0e-06	45.8
WP_190273388.1\|2694804_2695068_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013502217.1\|2695214_2695454_+	hypothetical protein	NA	NA	NA	NA
WP_150105202.1\|2695634_2697137_+	hypothetical protein	NA	NA	NA	NA
WP_041807267.1\|2697133_2697457_+	hypothetical protein	NA	NA	NA	NA
WP_013502221.1\|2697456_2697699_+	hypothetical protein	NA	NA	NA	NA
WP_013502222.1\|2697695_2697977_+	hypothetical protein	NA	NA	NA	NA
WP_013502223.1\|2697980_2698265_+	DUF2312 domain-containing protein	Q8W6H2	Sinorhizobium_phage	1.1e-21	67.6
WP_013502224.1\|2698264_2698873_+	hypothetical protein	A0A219YFC7	Ochrobactrum_phage	2.6e-25	39.1
WP_013502225.1\|2699220_2699412_+	hypothetical protein	NA	NA	NA	NA
WP_041807269.1\|2699516_2699726_+	hypothetical protein	NA	NA	NA	NA
WP_013502226.1\|2699700_2700267_+	hypothetical protein	NA	NA	NA	NA
2699995:2700013	attL	NA	NA	NA	NA
WP_150105259.1\|2700640_2701543_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_013502228.1\|2701542_2702217_+	hypothetical protein	NA	NA	NA	NA
WP_049800241.1\|2702341_2702566_-	hypothetical protein	NA	NA	NA	NA
WP_013502230.1\|2702847_2703114_-	hypothetical protein	NA	NA	NA	NA
WP_013502231.1\|2703273_2703525_+	hypothetical protein	A0A222YXA2	Mycobacterium_phage	1.3e-15	51.7
WP_013502232.1\|2703576_2704128_+	hypothetical protein	NA	NA	NA	NA
2703531:2703549	attR	NA	NA	NA	NA
WP_013502233.1\|2704179_2704581_+\|terminase	terminase small subunit	NA	NA	NA	NA
WP_013502234.1\|2704555_2706070_+\|terminase	terminase	A0A2I6PI49	Pseudomonas_phage	5.0e-102	43.7

DBSCAN-SWA_2

2710051 : 2718238

Brucella_phage(33.33%)

capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013502238.1\|2710051_2711071_+\|capsid	phage major capsid protein	H2EI54	Brucella_phage	1.2e-51	37.1
WP_013502239.1\|2711159_2711675_+	hypothetical protein	Q94MS0	Myxococcus_phage	7.5e-26	46.8
WP_013502240.1\|2711687_2711852_+	hypothetical protein	NA	NA	NA	NA
WP_013502241.1\|2711934_2712711_+	hypothetical protein	NA	NA	NA	NA
WP_013502242.1\|2712707_2713409_+	hypothetical protein	X2CYK7	Brucella_phage	1.9e-27	33.2
WP_190273355.1\|2713405_2715085_+	hypothetical protein	M4QM83	Sulfitobacter_phage	6.7e-108	40.5
WP_150105260.1\|2715159_2715465_+	N-acetyltransferase	NA	NA	NA	NA
WP_013502245.1\|2715467_2716493_+\|tail	tail fiber domain-containing protein	M4NM77	Sulfitobacter_phage	6.0e-59	42.8
WP_013502246.1\|2716492_2718238_+	cell wall hydrolase	A0A191VYL4	Roseobacter_phage	6.3e-08	29.2

DBSCAN-SWA_3

2847380 : 2857135

uncultured_Mediterranean_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013502367.1\|2847380_2848871_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.9e-94	42.6
WP_164631658.1\|2849148_2850564_+	deoxycytidylate deaminase	A0A291LDX0	Aeromonas_phage	1.4e-05	44.4
WP_150105262.1\|2850719_2851370_+	CAP domain-containing protein	A0A0E3T7R5	Bacillus_phage	1.1e-05	33.9
WP_013502370.1\|2851466_2852234_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.7e-35	36.6
WP_013502371.1\|2852292_2852667_-	response regulator	NA	NA	NA	NA
WP_013502372.1\|2852893_2853547_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.9e-26	46.3
WP_013502373.1\|2853667_2855107_+	peptidoglycan DD-metalloendopeptidase family protein	Q8SBN9	Clostridium_phage	1.2e-17	39.1
WP_041807852.1\|2855434_2857135_-	porin family protein	O11861	Bartonella_henselae_phage	1.6e-08	26.8

DBSCAN-SWA_4

3135615 : 3156754

Vibrio_phage(33.33%)

transposase,integrase,tail,portal

attL 3128006:3128020|attR 3138473:3138487

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3128006:3128020	attL	NA	NA	NA	NA
WP_013502631.1\|3135615_3136953_+\|integrase	phage integrase N-terminal SAM-like domain-containing protein	NA	NA	NA	NA
WP_013502632.1\|3137305_3138316_-\|integrase	tyrosine-type recombinase/integrase	A0A2I6UG75	Salinibacter_virus	2.2e-05	28.3
WP_041807325.1\|3138312_3138732_-	hypothetical protein	NA	NA	NA	NA
3138473:3138487	attR	NA	NA	NA	NA
WP_013502634.1\|3138896_3139658_-	DUF4118 domain-containing protein	NA	NA	NA	NA
WP_150105209.1\|3139920_3140121_-	hypothetical protein	NA	NA	NA	NA
WP_013502635.1\|3140213_3141167_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_013502637.1\|3141532_3142309_-	hypothetical protein	NA	NA	NA	NA
WP_013502638.1\|3142358_3142748_-	hypothetical protein	NA	NA	NA	NA
WP_013502640.1\|3143259_3143445_-	hypothetical protein	NA	NA	NA	NA
WP_190273356.1\|3144214_3145087_+\|tail	tail fiber protein	A0A0U4K7C7	Arthrobacter_phage	2.0e-07	39.6
WP_013502642.1\|3145321_3146929_+	hypothetical protein	A0A076GC88	Vibrio_phage	1.1e-22	21.0
WP_013502643.1\|3147038_3147209_+	hypothetical protein	NA	NA	NA	NA
WP_150105211.1\|3147306_3147531_+	hypothetical protein	NA	NA	NA	NA
WP_085977260.1\|3148245_3148689_+\|tail	tail fiber domain-containing protein	NA	NA	NA	NA
WP_049800204.1\|3148754_3150053_+	hypothetical protein	A0A2H5BM72	Streptomyces_phage	7.2e-17	43.1
WP_013502646.1\|3150059_3152564_+	hypothetical protein	NA	NA	NA	NA
WP_013502647.1\|3152542_3153172_+	hypothetical protein	NA	NA	NA	NA
WP_013502648.1\|3153137_3154736_+	hypothetical protein	A0A2I7RHB5	Vibrio_phage	8.2e-55	42.4
WP_013502649.1\|3154732_3156754_+\|portal	portal protein	A0A218MLX1	uncultured_virus	2.9e-57	27.0

DBSCAN-SWA_5

3162233 : 3183583

Mesorhizobium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013502657.1\|3162233_3162653_+	hypothetical protein	A0A076YJ67	Mesorhizobium_phage	5.4e-06	31.3
WP_082315589.1\|3162885_3163509_+	lysozyme	A0A0A8KXN5	Burkholderia_phage	6.7e-21	39.3
WP_013502659.1\|3163508_3163898_+	hypothetical protein	NA	NA	NA	NA
WP_041807334.1\|3164102_3164285_+	hypothetical protein	A0A076YNX1	Mesorhizobium_phage	4.4e-05	46.6
WP_013502661.1\|3164281_3164521_+	hypothetical protein	NA	NA	NA	NA
WP_013502663.1\|3164885_3165143_-	hypothetical protein	NA	NA	NA	NA
WP_013502664.1\|3165142_3165298_-	hypothetical protein	NA	NA	NA	NA
WP_013502665.1\|3165297_3165453_-	hypothetical protein	NA	NA	NA	NA
WP_013502666.1\|3165452_3165914_-	20S proteasome subunits A/B	A0A1C9LW40	Vibrio_phage	9.4e-12	35.7
WP_013502667.1\|3165891_3166527_-	hypothetical protein	L7TJ75	Rhizobium_phage	9.6e-23	36.4
WP_013502668.1\|3166523_3166715_-	hypothetical protein	NA	NA	NA	NA
WP_013502669.1\|3166707_3167310_-	hypothetical protein	A0A076YJ44	Mesorhizobium_phage	2.0e-09	29.2
WP_013502670.1\|3167317_3167470_-	hypothetical protein	NA	NA	NA	NA
WP_013502672.1\|3167657_3167963_-	hypothetical protein	NA	NA	NA	NA
WP_049800209.1\|3167938_3168754_-	hypothetical protein	L7TLU4	Rhizobium_phage	1.4e-42	40.0
WP_013502675.1\|3168949_3169147_-	hypothetical protein	NA	NA	NA	NA
WP_013502676.1\|3169351_3171436_-	DNA-directed DNA polymerase	A0A2H4YG91	Pseudomonas_virus	8.6e-113	36.8
WP_013502677.1\|3171644_3171815_-	hypothetical protein	NA	NA	NA	NA
WP_013502678.1\|3171814_3171994_-	hypothetical protein	NA	NA	NA	NA
WP_041807340.1\|3171990_3172332_-	hypothetical protein	NA	NA	NA	NA
WP_013502680.1\|3172457_3174083_-	toprim domain-containing protein	A0A0U1ZI53	Ralstonia_phage	3.4e-104	43.2
WP_150105214.1\|3174066_3174444_-	HNH endonuclease	H9YT15	environmental_Halophage	5.9e-20	45.1
WP_150105215.1\|3174442_3174733_+	hypothetical protein	NA	NA	NA	NA
WP_013502683.1\|3174735_3174975_-	hypothetical protein	NA	NA	NA	NA
WP_013502684.1\|3174977_3175799_-	pentapeptide repeat-containing protein	A0A0K1LJQ7	Mycobacterium_phage	2.8e-14	50.5
WP_013502685.1\|3175912_3176161_-	hypothetical protein	NA	NA	NA	NA
WP_013502686.1\|3176170_3176611_-	endonuclease I	A0A076YNU3	Mesorhizobium_phage	5.6e-22	44.5
WP_013502687.1\|3176610_3177192_-	hypothetical protein	NA	NA	NA	NA
WP_013502688.1\|3177315_3177792_-	hypothetical protein	NA	NA	NA	NA
WP_013502689.1\|3177788_3177935_-	hypothetical protein	NA	NA	NA	NA
WP_013502690.1\|3178318_3180847_-	DNA-directed RNA polymerase	A0A2R2ZGE5	Ralstonia_phage	1.1e-80	28.6
WP_013502691.1\|3181260_3181746_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.8e-12	41.5
WP_013502692.1\|3181924_3182620_-	CspA family cold shock protein	A0A1W6JNX5	Morganella_phage	2.1e-07	36.4
WP_013502693.1\|3182821_3183583_-	NAD-dependent deacetylase	S5M4R0	Bacillus_phage	2.8e-21	29.5

DBSCAN-SWA_6

3853078 : 3932036

Paracoccus_phage(13.33%)

transposase,capsid,portal,protease,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013503276.1\|3853078_3856951_-\|tail	glycoside hydrolase/phage tail family protein	A0A0B5A7K5	Paracoccus_phage	4.7e-221	40.9
WP_013503277.1\|3857079_3857649_-	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA
WP_013503278.1\|3857676_3858129_-	hypothetical protein	NA	NA	NA	NA
WP_013503279.1\|3858129_3858603_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013503280.1\|3858757_3859225_+	hypothetical protein	NA	NA	NA	NA
WP_013503281.1\|3859263_3859689_-	GFA family protein	NA	NA	NA	NA
WP_013503282.1\|3859754_3860207_-	C40 family peptidase	A0A1V0DYB6	Dinoroseobacter_phage	5.6e-33	50.7
WP_013503283.1\|3860249_3861161_-	DUF2163 domain-containing protein	A0A0K0PVK1	Roseobacter_phage	2.0e-61	42.5
WP_013503284.1\|3861292_3862420_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_013503285.1\|3862427_3863615_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_011157856.1\|3863675_3864443_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_013503286.1\|3864461_3866147_-	acyl-CoA synthetase	A0A2H4PQU7	Staphylococcus_phage	1.9e-78	40.0
WP_013503287.1\|3866300_3867293_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_013503288.1\|3867522_3868263_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013503289.1\|3868403_3868964_-	flagellar FlbT family protein	NA	NA	NA	NA
WP_013503290.1\|3869027_3871703_-	DUF1522 domain-containing protein	NA	NA	NA	NA
WP_013503291.1\|3871901_3872540_-	TIGR02217 family protein	A0A1V0DYB0	Dinoroseobacter_phage	2.7e-33	45.6
WP_013503292.1\|3872628_3873219_-\|tail	phage tail tape measure protein	A0A1B2AP03	Escherichia_phage	7.8e-11	34.9
WP_013503293.1\|3873218_3873419_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_013503294.1\|3873415_3873733_-	gene transfer agent family protein	NA	NA	NA	NA
WP_013503295.1\|3873742_3874150_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_013503296.1\|3874162_3874573_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_013503297.1\|3874569_3874890_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_013503298.1\|3874886_3875456_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_013503299.1\|3875517_3876285_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_013503300.1\|3876369_3876681_+	hypothetical protein	NA	NA	NA	NA
WP_082315600.1\|3876694_3877855_-	DNA-packaging protein	A0A0U4IJ26	Arthrobacter_phage	8.6e-70	41.0
WP_013503302.1\|3877931_3878888_-	hypothetical protein	NA	NA	NA	NA
WP_082315602.1\|3879123_3879324_+	DNA packaging protein	NA	NA	NA	NA
WP_041807420.1\|3879505_3880636_+	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_013503306.1\|3880641_3882129_-	DNA cytosine methyltransferase	M1PSQ0	Streptococcus_phage	1.3e-25	26.4
WP_142884169.1\|3882125_3882512_-	DNA mismatch endonuclease Vsr	NA	NA	NA	NA
WP_013503308.1\|3882945_3883317_-	DUF2019 domain-containing protein	NA	NA	NA	NA
WP_013503309.1\|3883313_3884207_-	hypothetical protein	NA	NA	NA	NA
WP_013503310.1\|3884486_3885743_-\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	2.6e-64	40.3
WP_049800218.1\|3885873_3886560_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	3.0e-30	49.0
WP_013503311.1\|3886707_3886887_-	hypothetical protein	NA	NA	NA	NA
WP_013503312.1\|3886891_3887092_-	hypothetical protein	NA	NA	NA	NA
WP_150105269.1\|3887184_3887757_-	hypothetical protein	NA	NA	NA	NA
WP_013503314.1\|3887894_3889070_-\|portal	phage portal protein	W8ECU7	Geobacillus_phage	1.2e-79	42.2
WP_150105227.1\|3889416_3889749_-	hypothetical protein	NA	NA	NA	NA
WP_013503316.1\|3890095_3890260_-	Flp family type IVb pilin	NA	NA	NA	NA
WP_013503317.1\|3890365_3891763_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_013503318.1\|3891891_3893481_-	MFS transporter	NA	NA	NA	NA
WP_013503319.1\|3893691_3894759_+	linear amide C-N hydrolase	NA	NA	NA	NA
WP_150105228.1\|3894890_3895646_-	hypothetical protein	NA	NA	NA	NA
WP_013503321.1\|3895716_3896016_-	BrnA antitoxin family protein	A0A2H4J5Y5	uncultured_Caudovirales_phage	1.1e-08	43.3
WP_013503322.1\|3896008_3896260_-	BrnT family toxin	NA	NA	NA	NA
WP_013503323.1\|3896392_3897565_+	serine hydrolase	NA	NA	NA	NA
WP_013503324.1\|3897882_3899175_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_150105229.1\|3899201_3901187_-	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	2.0e-13	30.7
WP_013503326.1\|3901307_3902447_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_041807425.1\|3902871_3903093_+	hypothetical protein	NA	NA	NA	NA
WP_013503327.1\|3903092_3905405_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_013503328.1\|3905401_3906547_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_013503329.1\|3906543_3906750_+	hypothetical protein	NA	NA	NA	NA
WP_013503330.1\|3907027_3907981_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_013503331.1\|3908276_3909491_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012495408.1\|3909566_3909887_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_013503332.1\|3909896_3911135_-	cytochrome P450	NA	NA	NA	NA
WP_013503333.1\|3911214_3911730_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_013503334.1\|3912023_3912767_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_013503335.1\|3912820_3913333_-	YcgN family cysteine cluster protein	NA	NA	NA	NA
WP_013503336.1\|3913601_3915884_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_013503337.1\|3915927_3916506_+	DUF1214 domain-containing protein	NA	NA	NA	NA
WP_013503338.1\|3916502_3917069_+	DUF1254 domain-containing protein	NA	NA	NA	NA
WP_013503339.1\|3917095_3917878_-	hypothetical protein	NA	NA	NA	NA
WP_013503340.1\|3917895_3918096_-	hypothetical protein	NA	NA	NA	NA
WP_041807426.1\|3918270_3918801_+	hypothetical protein	NA	NA	NA	NA
WP_013503342.1\|3918879_3919950_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_013503343.1\|3920102_3921077_+	DUF2336 domain-containing protein	NA	NA	NA	NA
WP_013503344.1\|3921308_3921650_-	DUF1491 family protein	NA	NA	NA	NA
WP_041807428.1\|3921792_3922608_-	peptidoglycan-binding protein	NA	NA	NA	NA
WP_013503346.1\|3922600_3924424_-	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	3.5e-33	36.4
WP_013503347.1\|3924829_3925252_+	DUF5330 domain-containing protein	NA	NA	NA	NA
WP_013503348.1\|3925367_3925796_+	SufE family protein	NA	NA	NA	NA
WP_013503349.1\|3925827_3926442_-	hypothetical protein	NA	NA	NA	NA
WP_190273396.1\|3926562_3927195_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_013503351.1\|3927279_3928020_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_013503352.1\|3928027_3928444_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.4e-22	50.8
WP_041807430.1\|3928643_3929576_-	hypothetical protein	NA	NA	NA	NA
WP_013503354.1\|3929840_3930623_+	class II aldolase/adducin family protein	NA	NA	NA	NA
WP_150105230.1\|3930793_3930982_-	hypothetical protein	NA	NA	NA	NA
WP_041807628.1\|3931082_3932036_-\|transposase	IS110 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NC_014834.1|WP_013502240.1|2711687_2711852_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_014834.1|WP_013502240.1|2711687_2711852_+|hypothetical-protein

2711687_2711852_+

54 aa aa

2710051-2718238

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_014834_1	TypeI	1.28\|3321839\|33\|NC_014834\|PILER-CR,CRISPRCasFinder,CRT	3321839-3321871	33	2713904-2713936	1

1. spacer 1.28|3321839|33|NC_014834|PILER-CR,CRISPRCasFinder,CRT matches to NC_014834 position: 2713904-2713936, mismatch: 1

ctccgcgcggtcaacggcgtcgacaccccgctg	CRISPR spacer
ctccgcgcggtcaacggcgtcgacgccccgctg	Protospacer
************************.********

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014834

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information