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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_016631 Granulicella mallensis MP5ACTX8, complete sequence 1 crisprs PD-DExK,RT,csa3,cas3,DinG 0 1 1 0

Results visualization

1. NC_016631
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_016631_1 4927682-4927772 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1911620-1911664 9 0.8
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123982-124026 9 0.8
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123976-124020 10 0.778
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123200-123244 10 0.778
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NC_016598 Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu plasmid pCpu, complete sequence 185-229 10 0.778
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123940-123984 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123946-123990 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123952-123996 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123958-124002 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123964-124008 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123970-124014 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123212-123256 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123218-123262 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1976639-1976683 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 250998-251042 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP035936 Acinetobacter cumulans strain WCHAc060092 plasmid p1_060092, complete sequence 31339-31383 11 0.756
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 123206-123250 12 0.733
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1911626-1911670 12 0.733
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NC_016598 Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu plasmid pCpu, complete sequence 179-223 12 0.733
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1976645-1976689 13 0.711
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP021463 Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_1, complete sequence 267326-267370 13 0.711
NC_016631_1 1.1|4927705|45|NC_016631|CRISPRCasFinder 4927705-4927749 45 NZ_CP021463 Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_1, complete sequence 267320-267364 14 0.689

1. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.8

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct	CRISPR spacer
gggagtgtgattgcttttgcttttgcttttgcttttgcctttgcc	Protospacer
 * ** * . .**************************** ****.

2. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.8

cgcaggga----atctgcttttgcttttgcttttgcttttgccgttgct	CRISPR spacer
----gcgatttgttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
    * **     *.***************************. *****

3. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.778

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct	CRISPR spacer
tgttttgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
.*.   *  *.***************************. *****

4. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.778

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct	CRISPR spacer
cattcgcggtttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
*..  * ..*.***************************. *****

5. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NC_016598 (Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu plasmid pCpu, complete sequence) position: , mismatch: 10, identity: 0.778

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct	CRISPR spacer
ctttatgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
* . . *  *.***************************. *****

6. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------gcttttgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
      *  *.***************************. *****      

7. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------gcttttgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
      *  *.***************************. *****      

8. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------gcttttgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
      *  *.***************************. *****      

9. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------gcttttgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
      *  *.***************************. *****      

10. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------gcttttgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
      *  *.***************************. *****      

11. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------gcttttgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
      *  *.***************************. *****      

12. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------gcttttgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
      *  *.***************************. *****      

13. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------gcttttgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
      *  *.***************************. *****      

14. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct	CRISPR spacer
ggggtgatgtttgcttttgcttttgcttttgcttttgcttttgcc	Protospacer
 * . *. .*.***************************. ****.

15. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct	CRISPR spacer
ggagtgatttttgcttttgcttttgcttttgcctttgcctttgcc	Protospacer
 * . *.  *.*********************.****** ****.

16. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP035936 (Acinetobacter cumulans strain WCHAc060092 plasmid p1_060092, complete sequence) position: , mismatch: 11, identity: 0.756

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct	CRISPR spacer
tggatttacgttgcttttgcttttgcttttgcttttgcttttgtt	Protospacer
.* *   *  .***************************. ***.*

17. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 12, identity: 0.733

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------cggtttgcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
       ..*.***************************. *****      

18. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 12, identity: 0.733

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------gtgattgcttttgcttttgcttttgcttttgcctttgcctttgct	Protospacer
      * . .**************************** ****.      

19. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NC_016598 (Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu plasmid pCpu, complete sequence) position: , mismatch: 12, identity: 0.733

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct	CRISPR spacer
ttttatctttatgcttttgcttttgcttttgcttttgcttttgct	Protospacer
. . .    * ***************************. *****

20. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 13, identity: 0.711

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------atgtttgcttttgcttttgcttttgcttttgcttttgcctttgcc	Protospacer
      . .*.***************************. ****.      

21. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP021463 (Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_1, complete sequence) position: , mismatch: 13, identity: 0.711

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------tctttttcttttgcttttgcttttgcttttgcttttgcttttgct	Protospacer
         *.* *************************. *****      

22. spacer 1.1|4927705|45|NC_016631|CRISPRCasFinder matches to NZ_CP021463 (Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_1, complete sequence) position: , mismatch: 14, identity: 0.689

cgcagggaatctgcttttgcttttgcttttgcttttgccgttgct------	CRISPR spacer
------tctttttctttttcttttgcttttgcttttgcttttgcttttgct	Protospacer
         *.* ***** *******************. *****      

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3939231 : 3998503 44 Bacillus_phage(20.0%) integrase,protease,transposase attL 3962721:3962750|attR 3964222:3964251
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage