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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_015058 Granulicella tundricola MP5ACTX9 plasmid pACIX903, complete sequence 0 crisprs csa3,PD-DExK 0 0 0 0
NC_015057 Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence 0 crisprs PD-DExK 0 0 1 0
NC_015060 Granulicella tundricola MP5ACTX9 plasmid pACIX905, complete sequence 0 crisprs NA 0 0 1 0
NC_015064 Granulicella tundricola MP5ACTX9, complete genome 7 crisprs cas3,DinG,csa3,RT,WYL 0 1 6 0
NC_015059 Granulicella tundricola MP5ACTX9 plasmid pACIX904, complete sequence 0 crisprs NA 0 0 0 0
NC_015065 Granulicella tundricola MP5ACTX9 plasmid pACIX902, complete sequence 0 crisprs PD-DExK 0 0 0 0

Results visualization

1. NC_015064
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015064_1 992883-992986 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015064_2 2467110-2467230 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015064_3 2679260-2679360 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015064_4 2895099-2895181 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015064_5 3372549-3372734 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015064_6 3890240-3890343 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015064_7 4061642-4061733 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_015064_5 5.3|3372657|24|NC_015064|CRT 3372657-3372680 24 NC_021920 Corynebacterium maris DSM 45190 plasmid pCmaris1, complete sequence 739-762 3 0.875

1. spacer 5.3|3372657|24|NC_015064|CRT matches to NC_021920 (Corynebacterium maris DSM 45190 plasmid pCmaris1, complete sequence) position: , mismatch: 3, identity: 0.875

aaccaccgatgagagcaacggctc	CRISPR spacer
caccaccgatgagggctacggctc	Protospacer
 ************.** *******

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 64747 : 122068 45 Mycobacterium_phage(25.0%) plate,integrase,transposase attL 92950:92977|attR 125581:125608
DBSCAN-SWA_2 231451 : 239643 8 Ostreococcus_lucimarinus_virus(33.33%) NA NA
DBSCAN-SWA_3 1794889 : 1805139 8 uncultured_phage(33.33%) integrase attL 1796338:1796353|attR 1803058:1803073
DBSCAN-SWA_4 2291632 : 2298964 9 Streptococcus_phage(28.57%) terminase,portal,head,protease,capsid NA
DBSCAN-SWA_5 2321864 : 2361464 32 Ralstonia_phage(25.0%) integrase,transposase attL 2323251:2323309|attR 2361578:2361636
DBSCAN-SWA_6 2935945 : 2986607 47 Corynebacterium_phage(12.5%) integrase,transposase attL 2930768:2930782|attR 2989341:2989355
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_015057
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 13496 : 96241 54 Planktothrix_phage(33.33%) transposase,plate NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NC_015060
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 51615 : 99833 40 Virus_Rctr85(22.22%) integrase,transposase attL 67966:67981|attR 82454:82469
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage