CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017372	Helicobacter pylori India7, complete genome	0 crisprs	cas2,DEDDh	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1216114 : 1246359

Helicobacter_phage(93.55%)

holin,integrase

attL 1205884:1205901|attR 1244195:1244212

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1205884:1205901	attL	NA	NA	NA	NA
WP_000813744.1\|1216114_1216528_-	nucleoside-diphosphate kinase	A0A0G2Y5H2	Acanthamoeba_polyphaga_mimivirus	7.1e-19	40.5
WP_000655181.1\|1216593_1217751_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.0e-119	56.8
WP_000078827.1\|1218049_1218373_+	hypothetical protein	A0A1S5RGX4	Helicobacter_phage	7.0e-22	60.3
WP_000786126.1\|1218488_1219637_+\|integrase	site-specific integrase	A0A1S5RF79	Helicobacter_phage	2.4e-189	89.5
WP_000662333.1\|1219633_1219846_+	hypothetical protein	A0A1S5REX2	Helicobacter_phage	2.6e-25	85.7
WP_000434476.1\|1219847_1220156_+	hypothetical protein	A0A1S5RFZ0	Helicobacter_phage	3.0e-46	90.1
WP_001106759.1\|1220152_1221109_+	helix-turn-helix domain-containing protein	A0A1S5RH20	Helicobacter_phage	7.6e-149	86.2
WP_014536194.1\|1221303_1221570_+	hypothetical protein	A0A1S5RGT8	Helicobacter_phage	1.6e-35	88.6
WP_000429239.1\|1221579_1222746_+	helicase DnaB	A0A1S5RHD0	Helicobacter_phage	2.0e-204	91.2
WP_000118372.1\|1224334_1226062_+	hypothetical protein	A0A1S5RFU1	Helicobacter_phage	1.4e-124	77.5
WP_001161740.1\|1226125_1231981_+	DUF3519 domain-containing protein	A0A1S5RGE7	Helicobacter_phage	0.0e+00	88.7
WP_001223802.1\|1232134_1232536_+	hypothetical protein	A0A1S5REZ2	Helicobacter_phage	8.9e-59	84.2
WP_000573789.1\|1232532_1233120_+	hypothetical protein	A0A1S5RFH5	Helicobacter_phage	1.3e-93	92.3
WP_000022961.1\|1233361_1233910_+	hypothetical protein	G9CU65	Helicobacter_phage	3.6e-87	90.8
WP_000890568.1\|1233921_1235055_+	DUF4043 family protein	I6P5A0	Helicobacter_phage	1.0e-200	93.6
WP_000811017.1\|1235069_1235429_+	hypothetical protein	A0A1S5RGN9	Helicobacter_phage	6.3e-48	84.9
WP_000465410.1\|1235460_1235886_+	hypothetical protein	A0A1S5REZ6	Helicobacter_phage	6.6e-36	84.6
WP_000348090.1\|1235924_1237733_+	hypothetical protein	A0A1S5RGR5	Helicobacter_phage	0.0e+00	93.5
WP_000360881.1\|1237840_1239397_+	hypothetical protein	A0A1S5RF06	Helicobacter_phage	2.0e-284	92.1
WP_000428611.1\|1239461_1239671_+	hypothetical protein	A0A1S5RGA4	Helicobacter_phage	1.2e-19	81.5
WP_000263453.1\|1239681_1239900_+	hypothetical protein	A0A1S5RF02	Helicobacter_phage	4.4e-20	67.1
WP_154017393.1\|1239896_1240223_+\|holin	holin	A0A1S5RF07	Helicobacter_phage	3.1e-41	76.9
WP_000364526.1\|1240224_1241214_+	hypothetical protein	A0A1S5RGW4	Helicobacter_phage	8.2e-130	71.6
WP_000675292.1\|1241197_1241431_+	hypothetical protein	A0A1S5RG40	Helicobacter_phage	6.6e-30	91.7
WP_000281642.1\|1241482_1242028_+	hypothetical protein	A0A1S5RF04	Helicobacter_phage	1.2e-98	97.2
WP_000381809.1\|1242030_1242831_+	hypothetical protein	A0A1S5RHD1	Helicobacter_phage	1.1e-121	89.5
WP_000323012.1\|1242831_1243428_+	hypothetical protein	A0A1S5RGX3	Helicobacter_phage	2.3e-55	63.3
WP_001146304.1\|1243427_1243754_+	hypothetical protein	A0A1S5RH47	Helicobacter_phage	8.0e-42	84.1
WP_000781017.1\|1243807_1244689_+	hypothetical protein	A0A1S5RGS0	Helicobacter_phage	3.8e-46	85.0
1244195:1244212	attR	NA	NA	NA	NA
WP_000343642.1\|1244704_1245532_+	hypothetical protein	I7HFY7	Helicobacter_phage	9.3e-119	80.6
WP_014536198.1\|1245531_1246359_+	hypothetical protein	A0A1S5RGH8	Helicobacter_phage	4.9e-112	88.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage