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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_014923 Mesorhizobium ciceri biovar biserrulae WSM1271, complete sequence 11 crisprs csa3,DEDDh,WYL,cas3 1 1 1 0
NC_014918 Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence 0 crisprs csa3 0 0 1 0

Results visualization

1. NC_014923
NC_014923 04000008000001200000160000020000002400000280000032000003600000400000044000004800000520000056000006000000 CRISPR 1 2 3 4 5 6 7 8 9 10 11 Self-targeting Prophage 1 anti-CRISPR
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_1 1288905-1289050 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_3 1846337-1846416 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_2 1845983-1846072 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_6 1848197-1848261 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_4 1847387-1847470 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_5 1847726-1847824 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_7 3308880-3308975 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_8 4521113-4521195 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_9 4725550-4725658 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_10 5666247-5666343 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014923_11 5675901-5676007 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_014923_6 6.1|1848220|19|NC_014923|CRISPRCasFinder 1848220-1848238 19 NC_014923.1 1915754-1915772 2 0.895
NC_014923_6 6.1|1848220|19|NC_014923|CRISPRCasFinder 1848220-1848238 19 NC_014923.1 2265084-2265102 2 0.895
NC_014923_6 6.1|1848220|19|NC_014923|CRISPRCasFinder 1848220-1848238 19 NC_014923.1 2735662-2735680 2 0.895
NC_014923_6 6.1|1848220|19|NC_014923|CRISPRCasFinder 1848220-1848238 19 NC_014923.1 4498199-4498217 2 0.895

1. spacer 6.1|1848220|19|NC_014923|CRISPRCasFinder matches to position: 1915754-1915772, mismatch: 2, identity: 0.895

ggcaagagcgacctcgtca	CRISPR spacer
ggcaagatcgaccacgtca	Protospacer
******* ***** *****

2. spacer 6.1|1848220|19|NC_014923|CRISPRCasFinder matches to position: 2265084-2265102, mismatch: 2, identity: 0.895

ggcaagagcgacctcgtca	CRISPR spacer
ggcaagatcgatctcgtca	Protospacer
******* ***.*******

3. spacer 6.1|1848220|19|NC_014923|CRISPRCasFinder matches to position: 2735662-2735680, mismatch: 2, identity: 0.895

ggcaagagcgacctcgtca	CRISPR spacer
ggcaagagcgacgtggtca	Protospacer
************ * ****

4. spacer 6.1|1848220|19|NC_014923|CRISPRCasFinder matches to position: 4498199-4498217, mismatch: 2, identity: 0.895

ggcaagagcgacctcgtca	CRISPR spacer
ggcaaggccgacctcgtca	Protospacer
******. ***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_014923_8 8.1|4521140|29|NC_014923|CRISPRCasFinder 4521140-4521168 29 NZ_CP024936 Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence 355069-355097 7 0.759
NC_014923_8 8.1|4521140|29|NC_014923|CRISPRCasFinder 4521140-4521168 29 NZ_CP014309 Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence 381038-381066 7 0.759
NC_014923_8 8.1|4521140|29|NC_014923|CRISPRCasFinder 4521140-4521168 29 NZ_CP014308 Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence 454062-454090 7 0.759

1. spacer 8.1|4521140|29|NC_014923|CRISPRCasFinder matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 7, identity: 0.759

tggacctttgtctggcgcgatcagtcgca	CRISPR spacer
ctgatgggtgtctggcgcgatccgtcgca	Protospacer
. **.   ************** ******

2. spacer 8.1|4521140|29|NC_014923|CRISPRCasFinder matches to NZ_CP014309 (Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.759

tggacctttgtctggcgcgatcagtcgca	CRISPR spacer
ctgatgggtgtctggcgcgatccgtcgca	Protospacer
. **.   ************** ******

3. spacer 8.1|4521140|29|NC_014923|CRISPRCasFinder matches to NZ_CP014308 (Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

tggacctttgtctggcgcgatcagtcgca	CRISPR spacer
ctgatgggtgtctggcgcgatccgtcgca	Protospacer
. **.   ************** ******

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3966014 : 3976080 12 Brucella_phage(25.0%) integrase attL 3959176:3959191|attR 3976317:3976332
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_014918
NC_014918 0400000 CRISPR Self-targeting Prophage 1 anti-CRISPR
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 326996 : 368110 34 Bacillus_virus(22.22%) transposase,plate,integrase attL 351973:351989|attR 372957:372973
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage