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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_014935 Nitratifractor salsuginis DSM 16511, complete sequence 3 crisprs cas3,csa3,DEDDh,WYL,cas6,cas8b1,cas7,cas5,cas4,cas2,cas1,cas9 17 12 3 1

Results visualization

1. NC_014935
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014935_1 1007818-1007948 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014935_2 1062730-1066682 TypeI-B NA
59 spacers
cas1,cas2,cas4,cas3,cas5,cas7,cas8b1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014935_3 1482030-1482850 TypeII NA
11 spacers
cas2,cas1,cas9

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_014935_2 2.1|1062761|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1062761-1062795 35 NC_014935.1 1766683-1766717 0 1.0
NC_014935_2 2.2|1062827|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1062827-1062861 35 NC_014935.1 1779311-1779345 0 1.0
NC_014935_2 2.5|1063025|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1063025-1063058 34 NC_014935.1 1797782-1797815 0 1.0
NC_014935_2 2.6|1063090|37|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1063090-1063126 37 NC_014935.1 1796372-1796408 0 1.0
NC_014935_2 2.7|1063158|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1063158-1063191 34 NC_014935.1 1795602-1795635 0 1.0
NC_014935_2 2.8|1063223|36|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1063223-1063258 36 NC_014935.1 1783625-1783660 0 1.0
NC_014935_2 2.14|1063624|33|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1063624-1063656 33 NC_014935.1 1795536-1795568 0 1.0
NC_014935_2 2.21|1064086|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1064086-1064120 35 NC_014935.1 1765048-1765082 0 1.0
NC_014935_2 2.22|1064152|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1064152-1064185 34 NC_014935.1 1765591-1765624 0 1.0
NC_014935_2 2.34|1064947|37|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1064947-1064983 37 NC_014935.1 1784031-1784067 0 1.0
NC_014935_2 2.9|1063290|37|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1063290-1063326 37 NC_014935.1 1780533-1780569 1 0.973
NC_014935_2 2.26|1064415|36|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1064415-1064450 36 NC_014935.1 1787434-1787469 1 0.972
NC_014935_2 2.3|1062893|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1062893-1062926 34 NC_014935.1 1764550-1764583 2 0.941
NC_014935_2 2.20|1064019|36|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1064019-1064054 36 NC_014935.1 1789221-1789256 2 0.944
NC_014935_2 2.31|1064748|36|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1064748-1064783 36 NC_014935.1 1793297-1793332 2 0.944
NC_014935_3 3.5|1482388|31|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482388-1482418 31 NC_014935.1 1774636-1774666 2 0.935
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NC_014935.1 1783260-1783289 2 0.933

1. spacer 2.1|1062761|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1766683-1766717, mismatch: 0, identity: 1.0

tgtcgccccgcttgagattgacaaaagtctctgga	CRISPR spacer
tgtcgccccgcttgagattgacaaaagtctctgga	Protospacer
***********************************

2. spacer 2.2|1062827|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1779311-1779345, mismatch: 0, identity: 1.0

cgccgccccacgtcgctagggcgataacccaggca	CRISPR spacer
cgccgccccacgtcgctagggcgataacccaggca	Protospacer
***********************************

3. spacer 2.5|1063025|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1797782-1797815, mismatch: 0, identity: 1.0

gctctctttgaaacggtctccacaaattccttcg	CRISPR spacer
gctctctttgaaacggtctccacaaattccttcg	Protospacer
**********************************

4. spacer 2.6|1063090|37|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1796372-1796408, mismatch: 0, identity: 1.0

gtctcatgctgccacctttttctttttctggatcatc	CRISPR spacer
gtctcatgctgccacctttttctttttctggatcatc	Protospacer
*************************************

5. spacer 2.7|1063158|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1795602-1795635, mismatch: 0, identity: 1.0

cacagaagagaagctgaagaggatcaacccgctc	CRISPR spacer
cacagaagagaagctgaagaggatcaacccgctc	Protospacer
**********************************

6. spacer 2.8|1063223|36|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1783625-1783660, mismatch: 0, identity: 1.0

ttgaagcggtccgcctcgatgagttggagagtaaac	CRISPR spacer
ttgaagcggtccgcctcgatgagttggagagtaaac	Protospacer
************************************

7. spacer 2.14|1063624|33|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1795536-1795568, mismatch: 0, identity: 1.0

tcgggtacccacagatcaagcacgccctggtca	CRISPR spacer
tcgggtacccacagatcaagcacgccctggtca	Protospacer
*********************************

8. spacer 2.21|1064086|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1765048-1765082, mismatch: 0, identity: 1.0

ttttgaagagccaaaagaaggggaatatatcgtga	CRISPR spacer
ttttgaagagccaaaagaaggggaatatatcgtga	Protospacer
***********************************

9. spacer 2.22|1064152|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1765591-1765624, mismatch: 0, identity: 1.0

cccagatcgagcttgcaaaaaagatgggtgtcag	CRISPR spacer
cccagatcgagcttgcaaaaaagatgggtgtcag	Protospacer
**********************************

10. spacer 2.34|1064947|37|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1784031-1784067, mismatch: 0, identity: 1.0

ccgaagcgatggcagaagcgcgccttctacgaagggg	CRISPR spacer
ccgaagcgatggcagaagcgcgccttctacgaagggg	Protospacer
*************************************

11. spacer 2.9|1063290|37|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1780533-1780569, mismatch: 1, identity: 0.973

ccgtcagcggttttggagatcttcccgtcagatgtca	CRISPR spacer
ccgtcagcggttttggagattttcccgtcagatgtca	Protospacer
********************.****************

12. spacer 2.26|1064415|36|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1787434-1787469, mismatch: 1, identity: 0.972

ggttgatagtacgcccatgcacggcaaattcatacc	CRISPR spacer
ggttgatagtacgcccctgcacggcaaattcatacc	Protospacer
**************** *******************

13. spacer 2.3|1062893|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1764550-1764583, mismatch: 2, identity: 0.941

cagtcttggggtggtagaggtcgcaactatccca	CRISPR spacer
cagtcttggggtggtagaggtcgcaactaggcca	Protospacer
*****************************  ***

14. spacer 2.20|1064019|36|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1789221-1789256, mismatch: 2, identity: 0.944

gcctcgccaatgtcgctggactcgatatcaacaatg	CRISPR spacer
gcctcgccaatgtcgcgggcctcgatatcaacaatg	Protospacer
**************** ** ****************

15. spacer 2.31|1064748|36|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to position: 1793297-1793332, mismatch: 2, identity: 0.944

atgacaaacagatagatcccatacctgcgggccagc	CRISPR spacer
atgataaacaaatagatcccatacctgcgggccagc	Protospacer
****.*****.*************************

16. spacer 3.5|1482388|31|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to position: 1774636-1774666, mismatch: 2, identity: 0.935

aaatggacagtggaatatcccgaaagacctg	CRISPR spacer
aaatgggcagtggaatatcccgaaagagctg	Protospacer
******.******************** ***

17. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to position: 1783260-1783289, mismatch: 2, identity: 0.933

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
tgatctcctggatcttgcggtcagtatcgt	Protospacer
**********************.**.****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_014935_2 2.10|1063358|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1063358-1063391 34 NZ_CP054023 Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence 279233-279266 6 0.824
NC_014935_2 2.10|1063358|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1063358-1063391 34 NZ_CP054033 Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence 438920-438953 6 0.824
NC_014935_3 3.3|1482256|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482256-1482285 30 NZ_CP032827 Sphingomonas sp. YZ-8 plasmid unnamed2, complete sequence 214774-214803 6 0.8
NC_014935_3 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482587-1482616 30 NC_042101 Enterococcus phage PMBT2, complete genome 39094-39123 6 0.8
NC_014935_3 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482587-1482616 30 NC_042022 Enterococcus phage phiSHEF4, complete genome 32236-32265 6 0.8
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 517615-517644 6 0.8
NC_014935_3 3.3|1482256|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482256-1482285 30 JX182371 Streptomyces phage SV1, complete genome 25053-25082 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NZ_CP025613 Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence 347414-347443 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NZ_CP010860 Marinovum algicola DG 898 plasmid pMaD5, complete sequence 124342-124371 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 476710-476739 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NZ_CP012915 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence 673397-673426 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 MH155878 Streptomyces phage RavenPuff, complete genome 27203-27232 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 MH155869 Streptomyces phage HotFries, complete genome 27251-27280 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 MH155872 Streptomyces phage Moozy, complete genome 27208-27237 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 MK686070 Streptomyces phage PherryCruz, complete genome 27203-27232 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 656271-656300 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 221187-221216 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 KM659092 Ochrobactrum sp. LM19 plasmid pLM19O2, complete sequence 7351-7380 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 1672473-1672502 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NZ_CP032340 Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence 1458974-1459003 7 0.767
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 MK894437 Microbacterium phage MonChoix, complete genome 23868-23897 7 0.767
NC_014935_2 2.21|1064086|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1064086-1064120 35 NZ_CP020005 Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence 155552-155586 8 0.771
NC_014935_2 2.22|1064152|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1064152-1064185 34 AP014693 Ralstonia phage RSL2 DNA, complete sequence 80591-80624 8 0.765
NC_014935_3 3.2|1482190|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482190-1482219 30 MN855776 Siphoviridae sp. isolate 36, complete genome 25684-25713 8 0.733
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 MN586042 Microbacterium phage Jayden, complete genome 37792-37821 8 0.733
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NC_008712 Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence 141954-141983 8 0.733
NC_014935_3 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482653-1482682 30 NZ_CP029358 Azospirillum sp. CFH 70021 plasmid unnamed3 8107-8136 8 0.733
NC_014935_2 2.34|1064947|37|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1064947-1064983 37 KR053194 Gordonia phage GAL1, complete genome 985-1021 9 0.757
NC_014935_3 3.5|1482388|31|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482388-1482418 31 NZ_CP010857 Marinovum algicola DG 898 plasmid pMaD2, complete sequence 97770-97800 9 0.71
NC_014935_3 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482587-1482616 30 MT074142 Bacteroides phage DAC23, complete genome 49995-50024 9 0.7
NC_014935_3 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482587-1482616 30 MT074141 Bacteroides phage DAC22, complete genome 52887-52916 9 0.7
NC_014935_3 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482587-1482616 30 MT074139 Bacteroides phage DAC19, complete genome 52700-52729 9 0.7
NC_014935_3 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482587-1482616 30 MT074140 Bacteroides phage DAC20, complete genome 52700-52729 9 0.7
NC_014935_3 3.10|1482719|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482719-1482748 30 NZ_CP045274 Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence 55963-55992 9 0.7
NC_014935_2 2.19|1063953|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1063953-1063987 35 NZ_CP040937 Hymenobacter sp. DG01 plasmid unnamed, complete sequence 194692-194726 10 0.714
NC_014935_2 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1065081-1065115 35 KX879627 Campylobacter phage vB_CjeM_Los1, complete genome 43079-43113 10 0.714
NC_014935_2 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1065081-1065115 35 MH107028 Campylobacter phage CP39, partial genome 111701-111735 10 0.714
NC_014935_2 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1065081-1065115 35 NC_015464 Campylobacter phage NCTC12673, complete genome 90478-90512 10 0.714
NC_014935_2 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1065081-1065115 35 KF148616 Campylobacter phage CP8, complete genome 43649-43683 10 0.714
NC_014935_2 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1065081-1065115 35 NC_016562 Campylobacter phage CPX, complete genome 43415-43449 10 0.714
NC_014935_2 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1065081-1065115 35 KX236333 Campylobacter phage PC14, complete genome 125470-125504 10 0.714
NC_014935_2 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1065081-1065115 35 JX569801 Campylobacter phage CP30A, complete genome 92115-92149 10 0.714
NC_014935_2 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1065081-1065115 35 KX229736 Campylobacter phage PC5, complete genome 56004-56038 10 0.714
NC_014935_2 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT 1065081-1065115 35 NC_042112 Campylobacter phage CP81, complete genome 85025-85059 10 0.714
NC_014935_3 3.3|1482256|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT 1482256-1482285 30 NZ_CP054606 Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence 54551-54580 10 0.667

1. spacer 2.10|1063358|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054023 (Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence) position: , mismatch: 6, identity: 0.824

acgtcggccattgcgctctcgaaatccatcgctg-	CRISPR spacer
ccgtcggccagtgcgctctcgaaaccc-tggccga	Protospacer
 ********* *************.** * **.* 

2. spacer 2.10|1063358|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 6, identity: 0.824

acgtcggccattgcgctctcgaaatccatcgctg-	CRISPR spacer
ccgtcggccagtgcgctctcgaaaccc-tggccga	Protospacer
 ********* *************.** * **.* 

3. spacer 3.3|1482256|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP032827 (Sphingomonas sp. YZ-8 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

tggtagcgtcggacagatcgacatcaaccg	CRISPR spacer
gcgcatcgtcggacagatcggcatcaaccc	Protospacer
  *.* **************.******** 

4. spacer 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NC_042101 (Enterococcus phage PMBT2, complete genome) position: , mismatch: 6, identity: 0.8

caagattaaacgacttaaaaaagacatcct	CRISPR spacer
taagattaagcaacttaaaaaagacattgc	Protospacer
.********.*.***************. .

5. spacer 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NC_042022 (Enterococcus phage phiSHEF4, complete genome) position: , mismatch: 6, identity: 0.8

caagattaaacgacttaaaaaagacatcct	CRISPR spacer
taagattaagcaacttaaaaaagacattgc	Protospacer
.********.*.***************. .

6. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
aggtgtcgtggatcatgcggtcggtgtcgg	Protospacer
 *.* ** ****** ************** 

7. spacer 3.3|1482256|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to JX182371 (Streptomyces phage SV1, complete genome) position: , mismatch: 7, identity: 0.767

tggtagcgtcggacagatcgacatcaaccg	CRISPR spacer
cgcgtgcgtcgcacagatcgagatcaaccc	Protospacer
.*   ****** ********* ******* 

8. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
acacgcccttgatcttgcggtcggtgtcgc	Protospacer
  *. .*** *******************.

9. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
tcgcttccttgatcttgcgggcggtgtcga	Protospacer
* ...**** ********** ******** 

10. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cgatctcctggatcatgccgtcgggtccgc	Protospacer
.************* *** *****  .**.

11. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cgatctcctggatcatgccgtcgggtccgc	Protospacer
.************* *** *****  .**.

12. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MH155878 (Streptomyces phage RavenPuff, complete genome) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cggcctcgtcgatcttgcggtcggtgtagc	Protospacer
.*..*** * ***************** *.

13. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MH155869 (Streptomyces phage HotFries, complete genome) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cggcctcgtcgatcttgcggtcggtgtagc	Protospacer
.*..*** * ***************** *.

14. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MH155872 (Streptomyces phage Moozy, complete genome) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cggcctcgtcgatcttgcggtcggtgtagc	Protospacer
.*..*** * ***************** *.

15. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MK686070 (Streptomyces phage PherryCruz, complete genome) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cggcctcgtcgatcttgcggtcggtgtagc	Protospacer
.*..*** * ***************** *.

16. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cgatctcctggatcatgccgtcgggtccgc	Protospacer
.************* *** *****  .**.

17. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cgatctcctggatcatgccgtcgggaccgc	Protospacer
.************* *** ***** ..**.

18. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to KM659092 (Ochrobactrum sp. LM19 plasmid pLM19O2, complete sequence) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
gggcctcccggagcttgcggtcggtgttgc	Protospacer
 *..****.*** **************.*.

19. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
tgtcgaactggatcttgccgtcggcgtcgt	Protospacer
** .   *********** *****.*****

20. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cgatctcctggatcatgccgtcgggtccgc	Protospacer
.************* *** *****  .**.

21. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MK894437 (Microbacterium phage MonChoix, complete genome) position: , mismatch: 7, identity: 0.767

tgatctc----ctggatcttgcggtcggtgtcgt	CRISPR spacer
----cccgacgcttgatcttgcggtcggtgccgt	Protospacer
    *.*    ** ****************.***

22. spacer 2.21|1064086|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.771

----ttttgaagagccaaaagaaggggaatatatcgtga	CRISPR spacer
gggattt----gagacaaaagaagaggaatatatcgcaa	Protospacer
    ***    *** *********.***********..*

23. spacer 2.22|1064152|34|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to AP014693 (Ralstonia phage RSL2 DNA, complete sequence) position: , mismatch: 8, identity: 0.765

cccaga---tcgagcttgcaaaaaagatgggtgtcag	CRISPR spacer
---agactgtcgagcttgctaaacagatgggtgttgt	Protospacer
   ***   ********** *** **********.. 

24. spacer 3.2|1482190|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MN855776 (Siphoviridae sp. isolate 36, complete genome) position: , mismatch: 8, identity: 0.733

tatctatatgaatatagccttcaccactaa	CRISPR spacer
caactatatgaatataaccttgaccaactg	Protospacer
.* *************.**** **** . .

25. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MN586042 (Microbacterium phage Jayden, complete genome) position: , mismatch: 8, identity: 0.733

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cgtacttcttgatcttgcggtcggtgtacc	Protospacer
.*  **.** *****************  .

26. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NC_008712 (Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence) position: , mismatch: 8, identity: 0.733

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cctgcccgtgggtcttgcggtcggtgtcgg	Protospacer
.   *.* ***.***************** 

27. spacer 3.9|1482653|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 8, identity: 0.733

tgatctcctggatcttgcggtcggtgtcgt	CRISPR spacer
cggcggcctggatcttccggtcggtggcgg	Protospacer
.*..  ********** ********* ** 

28. spacer 2.34|1064947|37|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to KR053194 (Gordonia phage GAL1, complete genome) position: , mismatch: 9, identity: 0.757

ccgaagcgatggcagaagcgcgccttctacgaagggg	CRISPR spacer
cggcagcaatggcagaagcccgccttctactgcgtga	Protospacer
* * ***.*********** ********** . * *.

29. spacer 3.5|1482388|31|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP010857 (Marinovum algicola DG 898 plasmid pMaD2, complete sequence) position: , mismatch: 9, identity: 0.71

aaatggacagtggaatatcccgaaagacctg	CRISPR spacer
aactggacggtggaatatcccgagctgaacg	Protospacer
** *****.**************.  .  .*

30. spacer 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 9, identity: 0.7

caagattaaacgacttaaaaaagacatcct	CRISPR spacer
tggaattaaagtacttaaaaaagacattaa	Protospacer
....******  ***************.  

31. spacer 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 9, identity: 0.7

caagattaaacgacttaaaaaagacatcct	CRISPR spacer
tggaattaaagtacttaaaaaagacattaa	Protospacer
....******  ***************.  

32. spacer 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 9, identity: 0.7

caagattaaacgacttaaaaaagacatcct	CRISPR spacer
tggaattaaagtacttaaaaaagacattaa	Protospacer
....******  ***************.  

33. spacer 3.8|1482587|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 9, identity: 0.7

caagattaaacgacttaaaaaagacatcct	CRISPR spacer
tggaattaaagtacttaaaaaagacattaa	Protospacer
....******  ***************.  

34. spacer 3.10|1482719|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 9, identity: 0.7

cagggctttcgacattgcctgtaaatactt	CRISPR spacer
gtcctttttctacattgcatgtaaatacta	Protospacer
     .**** ******* ********** 

35. spacer 2.19|1063953|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040937 (Hymenobacter sp. DG01 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

gatgatgcagcgcaggactttgcccacgatctgaa	CRISPR spacer
ctgaaatcagcgcaggactttgcccaccagctggg	Protospacer
   .*  ******************** * ***..

36. spacer 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to KX879627 (Campylobacter phage vB_CjeM_Los1, complete genome) position: , mismatch: 10, identity: 0.714

cctcaatttctcttacaatttcatcgtaagggcga	CRISPR spacer
ttggtatttctcttacaatttcatcatcaggaata	Protospacer
..   ********************.* ***.  *

37. spacer 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to MH107028 (Campylobacter phage CP39, partial genome) position: , mismatch: 10, identity: 0.714

cctcaatttctcttacaatttcatcgtaagggcga	CRISPR spacer
ttggtatttctcttacaatttcatcatcaggaata	Protospacer
..   ********************.* ***.  *

38. spacer 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to NC_015464 (Campylobacter phage NCTC12673, complete genome) position: , mismatch: 10, identity: 0.714

cctcaatttctcttacaatttcatcgtaagggcga	CRISPR spacer
ttggtatttctcttacaatttcatcatcaggaata	Protospacer
..   ********************.* ***.  *

39. spacer 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to KF148616 (Campylobacter phage CP8, complete genome) position: , mismatch: 10, identity: 0.714

cctcaatttctcttacaatttcatcgtaagggcga	CRISPR spacer
ttggtatttctcttacaatttcatcatcaggaata	Protospacer
..   ********************.* ***.  *

40. spacer 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to NC_016562 (Campylobacter phage CPX, complete genome) position: , mismatch: 10, identity: 0.714

cctcaatttctcttacaatttcatcgtaagggcga	CRISPR spacer
ttggtatttctcttacaatttcatcatcaggaata	Protospacer
..   ********************.* ***.  *

41. spacer 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to KX236333 (Campylobacter phage PC14, complete genome) position: , mismatch: 10, identity: 0.714

cctcaatttctcttacaatttcatcgtaagggcga	CRISPR spacer
ttggtatttctcttacaatttcatcatcaggaata	Protospacer
..   ********************.* ***.  *

42. spacer 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to JX569801 (Campylobacter phage CP30A, complete genome) position: , mismatch: 10, identity: 0.714

cctcaatttctcttacaatttcatcgtaagggcga	CRISPR spacer
ttggtatttctcttacaatttcatcatcaggaata	Protospacer
..   ********************.* ***.  *

43. spacer 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 10, identity: 0.714

cctcaatttctcttacaatttcatcgtaagggcga	CRISPR spacer
ttggtatttctcttacaatttcatcatcaggaata	Protospacer
..   ********************.* ***.  *

44. spacer 2.36|1065081|35|NC_014935|PILER-CR,CRISPRCasFinder,CRT matches to NC_042112 (Campylobacter phage CP81, complete genome) position: , mismatch: 10, identity: 0.714

cctcaatttctcttacaatttcatcgtaagggcga	CRISPR spacer
ttggtatttctcttacaatttcatcatcaggaata	Protospacer
..   ********************.* ***.  *

45. spacer 3.3|1482256|30|NC_014935|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP054606 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence) position: , mismatch: 10, identity: 0.667

tggtagcgtcggacagatcgacatcaaccg	CRISPR spacer
acagggcgttggacagatcgacatcatagc	Protospacer
  . .****.****************    

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1399867 : 1409860 11 Enterobacteria_phage(44.44%) transposase,integrase attL 1399616:1399631|attR 1419388:1419403
DBSCAN-SWA_2 1763390 : 1805778 70 Campylobacter_phage(12.5%) portal,integrase,holin,tail,terminase,plate,head,tRNA attL 1757828:1757841|attR 1773694:1773707
DBSCAN-SWA_3 2006803 : 2014774 8 Synechococcus_phage(16.67%) NA NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NC_014935.1|WP_013554734.1|1791077_1791236_-|DUF5320-domain-containing-protein 1791077_1791236_- 52 aa aa NA NA NA 1763390-1805778 yes