CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017618	Streptococcus suis JS14, complete sequence	1 crisprs	PrimPol,DinG,WYL,csa3,cas3,DEDDh	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_017618_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017618_1

1814646-1814769

Orphan

Consensus_repeat	Method
CCAATCAACCACTACTGCGCTAAGATGTTGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017618_1

>merge|NC_017618|1|1814646-1814769|CRISPRCasFinder
CCAATCAACCACTACTGCGCTAAGATGTTGACACTAACGTTGAGAAGCGGTACAGGGCTTGAGCCCAGCTTCACTCCACTGGACTGTTAAACCCAATCAACCACTACTGCGCTGAGATGTTGAC

>NC_017618|1|1|1814646-1814769|CRISPRCasFinder
CCAATCAACCACTACTGCGCTAAGATGTTGAC	ACTAACGTTGAGAAGCGGTACAGGGCTTGAGCCCAGCTTCACTCCACTGGACTGTTAAAC
CCAATCAACCACTACTGCGCTGAGATGTTGAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017618.1\|WP_012027766.1\|1811110_1812334_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NC_017618.1\|WP_012027770.1\|1816961_1817798_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NC_017618.1\|WP_012027774.1\|1820646_1821549_-\|SPFH-domain-containing-protein	unknown	unknown	gnl\|CDD\|259805
NC_017618.1\|WP_002942324.1\|1804046_1805045_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NC_017618.1\|WP_002938143.1\|1802144_1803101_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NC_017618.1\|WP_012027759.1\|1803102_1804044_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NC_017618.1\|WP_009910805.1\|1824254_1824731_-\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
NC_017618.1\|WP_002937416.1\|1821558_1822809_-\|threonine-ammonia-lyase-IlvA	unknown	unknown	gnl\|CDD\|236318
NC_017618.1\|WP_002938165.1\|1813616_1814390_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NC_017618.1\|WP_012775334.1\|1816111_1816834_-\|adaptor-protein-MecA	unknown	unknown	gnl\|CDD\|235030
NC_017618.1\|WP_012027769.1\|1814942_1816115_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NC_017618.1\|WP_009910803.1\|1823091_1824114_-\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NC_017618.1\|WP_012775335.1\|1819482_1820226_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NC_017618.1\|WP_012028491.1\|1817924_1819490_+\|ABC-transporter-substrate-binding-protein/permease	unknown	unknown	gnl\|CDD\|270345
NC_017618.1\|WP_012775331.1\|1805421_1807212_-\|oligopeptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173875
NC_017618.1\|WP_009910800.1\|1820351_1820561_-\|hypothetical-protein	unknown	unknown	unknown
NC_017618.1\|WP_012027765.1\|1810683_1811124_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
NC_017618.1\|WP_012775333.1\|1812337_1813600_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NC_017618.1\|WP_002938151.1\|1808918_1810334_-\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
NC_017618.1\|WP_012775332.1\|1807424_1808666_+\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600

Protein	Function_ID	Function_description	E-value
NC_017618.1\|WP_012027766.1\|1811110_1812334_-\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NC_017618.1\|WP_012027770.1\|1816961_1817798_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	1.49616e-101
NC_017618.1\|WP_002942324.1\|1804046_1805045_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.71068e-159
NC_017618.1\|WP_002938143.1\|1802144_1803101_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.06681e-112
NC_017618.1\|WP_012027759.1\|1803102_1804044_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	2.10004e-119
NC_017618.1\|WP_009910805.1\|1824254_1824731_-\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	1.6123e-73
NC_017618.1\|WP_002937416.1\|1821558_1822809_-\|threonine-ammonia-lyase-IlvA	gnl\|CDD\|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
NC_017618.1\|WP_002938165.1\|1813616_1814390_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	2.74827e-148
NC_017618.1\|WP_012775334.1\|1816111_1816834_-\|adaptor-protein-MecA	gnl\|CDD\|235030	PRK02315, PRK02315, adaptor protein MecA.	2.58092e-83
NC_017618.1\|WP_012027769.1\|1814942_1816115_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	9.66017e-81
NC_017618.1\|WP_009910803.1\|1823091_1824114_-\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NC_017618.1\|WP_012775335.1\|1819482_1820226_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	7.30548e-147
NC_017618.1\|WP_012028491.1\|1817924_1819490_+\|ABC-transporter-substrate-binding-protein/permease	gnl\|CDD\|270345	cd13627, PBP2_AA_binding_like_2, Substrate-binding domain of putative amino acid-binding protein; the type 2 periplasmic-binding protein fold. This putative amino acid-binding protein belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.18368e-91
NC_017618.1\|WP_012775331.1\|1805421_1807212_-\|oligopeptide-ABC-transporter-substrate-binding-protein	gnl\|CDD\|173875	cd08510, PBP2_Lactococcal_OppA_like, The substrate binding component of an ABC-type lactococcal OppA-like transport system contains. This family represents the substrate binding domain of an ATP-binding cassette (ABC)-type oligopeptide import system from Lactococcus lactis and other gram-positive bacteria, as well as its closet homologs from gram-negative bacteria. Oligopeptide-binding protein (OppA) from Lactococcus lactis can bind peptides of length from 4 to at least 35 residues without sequence preference. The oligopeptide import system OppABCDEF is consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and also is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NC_017618.1\|WP_012027774.1\|1820646_1821549_-\|SPFH-domain-containing-protein	gnl\|CDD\|259805	cd03407, SPFH_like_u4, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease and, in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	3.71678e-128
NC_017618.1\|WP_012027765.1\|1810683_1811124_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	8.16406e-68
NC_017618.1\|WP_012775333.1\|1812337_1813600_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	4.97321e-124
NC_017618.1\|WP_002938151.1\|1808918_1810334_-\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NC_017618.1\|WP_012775332.1\|1807424_1808666_+\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	5.36323e-91

>NC_017618.1|WP_002938165.1|1813616_1814390_-|Fe-S-cluster-assembly-ATPase-SufC
MSVLEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPSYEVTQGEILFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLRAAMNAGKEDEDKISVRDFITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFALLDEIDSGLDIDALKVVSKGINAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAQRLEKEGYVQVAAELGIDYKEDDI
>NC_017618.1|WP_012775333.1|1812337_1813600_-|Fe-S-cluster-assembly-protein-SufD
MTKEKIQEFSALQAEPTWLTDLRLKAFDKIAELDLPVIERVKFHRWNLGDGSLATNDEIGAVPDFTAIGDNPMLVQVGSQTILEQLPVALVEKGVVFTDFASAMDVIPDVLEKYLGAAVAYDEHKLAAYNTAYFNATAVLYVPDNVEIDQPVEALFYQDSTSPVAFNKRVLIIAGKNAKLNYLERFESLGDGAATTSANIVVEVIALAGSQIKFAAIDRLGKHLDTYLNRRGYLGNDATIDWAIGLLNEGNVVADLDSELKGNGSHANLKVVGLSSGRQVQGVDTRVTNYGHNSVGHILQHGVILESGTLTFNGIGHIVRGAKGADAQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDRATAERLVVRGFLGSVITEIPVKEVRDQLIAVIEEKLTKR
>NC_017618.1|WP_012027766.1|1811110_1812334_-|cysteine-desulfurase
MDLERIRKEFSILDQVVNDEPLVYLDNAATTQKPQQVLDVLADYYQKDNANVHRGVHTLSERATTRYEAARQKVADFIQAKSSKEILFTRGTTTSLNWVAQFAKEILQPDQEVIISVQEHHSNIIPWQQACQQTGAKLRYVTLKDGELDMDHLRSLLSSKTKFVSLAHVSNVLGGVVPIGEIAELVHQVGAYLVVDGAQSVPHMGVNVQELDVDFYAFSGHKMLGPTGIGILYGKEELLNLMSPVEFGGEMIDFVYEQSATWKELPWKFEAGTPNIAGAIGLGAAIDYLTEIGMDAIQAHEAELVDYVFPKLQAIPGLTIYGSQDLSKRTGVIAFNLDDLHPHDVATALDYEGVAVRAGHHCAQPLLRYLQVPATVRASFYIYNTKADCDKLVEAIIKTKEFFNGPI
>NC_017618.1|WP_012027765.1|1810683_1811124_-|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MALSRLDSLYMAVVSEHSKSPRHRGSLDGVEKLELHNPTCGDVIELSVKIEKDVITDIAFDGVGCTISTASASMMTEAVLGKEISQIQELAEIFSQMVRGQEDPRQKELGDASLLAGVAKFPQRIKCATLPWNALKKALSLRSSAE
>NC_017618.1|WP_002938151.1|1808918_1810334_-|Fe-S-cluster-assembly-protein-SufB
MSEERIEPTPIDLGEYKFGFHDENVELVASTGKGLNEEVIREMSRIKGEPEWMLEFRLKSYETFKKMPMQTWGADLSELDFDDIVYYQKPSDKPARSWDDVPDKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKHGIIFTDTDTALKEHPELFKKYFGKLVPPSDNKLAALNSAVWSGGTFIYVPKGVKLDIPLQTYFRINNEGTGQFERTLIIVDEGASVHYVEGCTAPTYSTASLHAAIVEIIAHEGAYMRYTTIQNWSDNVYNLVTKRARAEKNATVEWIDGNLGAKTTMKYPAVYLEGEGARGTMLSIAFANKGQVQDTGAKMIHNAPRTSSSIVSKSIARGGGEVNYRGQVTFAKNSAKSISHIECDTIIMDDISKSDTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLIAYEMEGSVG
>NC_017618.1|WP_012775332.1|1807424_1808666_+|D-alanyl-D-alanine-carboxypeptidase
MRKLLLTLTTILAVFLTSTPILAEDFSVAAKHAIAVEVSSGKILYEQDAETKASIASISKTLSIYLVYEALAKGEITLDTMVDISDYPYSLTSNTELSNVNLDERSYSVRDLLNASLITSSNSAIIALAEKIAGSEAAFVDRMKAKVQEWGITDTKIVNVSGLDNTDLGENIYPGSSPEDVNMFSALDVAIIARRLILDYPQVLDITSLNAYDFGGYTYYSTNQMLSDGTHARGGVDGLKTGTSNSAGSSFLATTQQAGMRIITVVLNANDGLTSPENRFVATNDLMNYVYSNFSLVTLVKKSEAFGDSKIKVFNGEKETSPVVAAADLTVVQRNQTDNVPTATFTTDIKEIDAPLKAGTLVSKLQLKDQDLIGKGYISEQTGVDMIIPSDMKEASWPFSWWNQFVRYVNEKL
>NC_017618.1|WP_012775331.1|1805421_1807212_-|oligopeptide-ABC-transporter-substrate-binding-protein
MKKTTKLFALAGVTLLSASVLAACGSKQSGAAKQELSFPAEVKQDGTAVADAQLKYAWVSPTTSSGLLIDELTENTTDSTFGGMVDISMFGYDGERKLDDSGLAKAEFDVKGKKITVSLTGKDYKWSDGESFTINDYIFTIKSMASKDYTGIRFDDKFLNIEGMQEFVDGKASDISGIKKVDDYTVELTVKEMSPSMMYAGGDVPAYIQPEHIYKDIPVADWEKSEYSRTAKLVGMGPWKIKEIVNGESITYVPNEYFFKGTKPKTSSLKIDIVSPDTIVSEMKAGNYDIAEMPVDQLDSYKDASNLNIVGQLESSYEYISFNFGKYDEAAGKNVMDENAKMNDVKLRQAIAYAIDTKTAGKSLYNGLYHPAKSLIISFFGDIHDSELEGYSYNPEKAKKLLDEAGYKDVDGDGIREGKDGKAFKITFAARKRTEANEALVQQYIAWWKEVGLNVELYTGRTVEGKSFYNSVQANDAAIDMYAGGWSTGYDPNPSGLWGPIAAFNMSRFVSDENTKLLEAISSAESFDDKKNVENYKAWQKYAHEQAFAIPTFESEKITAVNKRVKSYDTKYGSASGTGLAYEGIELTADKGVVAE
>NC_017618.1|WP_002942324.1|1804046_1805045_-|ABC-transporter-ATP-binding-protein
MATEKPLLDIKDLHVGFRIGDDYFDAVDGVDISLQKNEILAIVGESGCGKSTLATTIMGLHNPLNTKITGSIQYNDMELIGMDEAKYNTVRGNDIGMIFQDPLASLNPLMTIGAQIDEALFYHTDLDANARTERVLELLAQVGIPNPKRTFKQYPHELSGGMRQRIIIAMALSCKPPIIIADEPTTALDVTIQAQILDLLNDIQAETGSGIILITHDLGVVAETADRVAVMYGGQFVEVAPVEELFTNPKHPYTRSLLKSNPQSGSEGGDLHVIEGIVPPITKMVRKGCRFAPRIPWIGAEAHEENPSMHEVGPNHFVRCTCHETFYFEGEA
>NC_017618.1|WP_012027759.1|1803102_1804044_-|ABC-transporter-ATP-binding-protein
MGFIEVKDLKVHYPIRSGFFNRVTDHVYAVDGVNIEFEEGKTYGLVGESGSGKSTIGKAIIGLERATSGQIIYEGQDVTNKSRGKKGNFNRDVQMIFQDSLSSFNPKKRILDIIAEPIRNFDRLSPDEEKKKVLQLLDTIGLNEEALIKYPHEFSGGQRQRIGVARALASNPRLIIADEPVSALDLSVQAQVLNYMKRIQDEFKLSYLFISHDLGVVQHMCDELFIMYRGRFVETGNKNDIYNNPQHIYTKRLLSAIPTIDPLNRLKNKEKRLAAEKEYQEMQGQYYDENGRVYDLRSFSETHQVALPEGGQN
>NC_017618.1|WP_002938143.1|1802144_1803101_-|ABC-transporter-permease
MWKTVLRRLLMMIPQIIILSVIAFFVAKMMPGDPFTGLIDPNIDPAIIEQKRIAAGYYDPIPVQYFRWVGNLLQGDFGQSVIFKQPVVDVIMQRLNNTIGLSLLTMVLTYLIALPLGMIAGRYQNSLADKIIGVYNFLTFSTPTFVFAILMLWMFGFSLGWFPTRGSISGGVEGFAATLSRLHHMILPAITMAILSTTVTIQYLRTGIIDAKSQDYVRTARAKGVPERVVYNRHIFRNSILPIASFLGYELTGLIGGSIFIENIFTYPGIGQLFFNSISSRDYSVILALLLVFGMGTLLGTLISDIIMSIVDPRIRVK
>NC_017618.1|WP_012027769.1|1814942_1816115_-|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MIPFALKYIMVIITTMVISAIATPLVRFMSLRVGAVDNPNARRINKVPMPSAGGLAIFVAFTISVLWFLPGIVTRVNYHGTYLHYIWPLVLASSIIVLTGFIDDVKELKPAPKMFGILAAATIIWIFTEFRFDSFKIPFGGPFLQFPVWLSFLLTVLWIVSITNAVNLIDGLDGLVSGVSIISLTTMGIVSYFFLHDSNIFLTLTIFVLVAAIVGFLPYNYNPAIIYLGDTGALFIGFMIGVLSLQGLKNSTAVAVVTPMIILGVPITDTVVAIIRRKLSGQKIYEADKMHLHHRLLSLGLTHRGTVLVIYAISFLFSLTSLLLNVSSRIGGILLLVTMGLGIEILCELIGIFGINRTPLLNLLRFIGNSSYRQEKIAKYKKCCEEKKRK
>NC_017618.1|WP_012775334.1|1816111_1816834_-|adaptor-protein-MecA
MKVKQISDSTLKITIKLDDLEERGMELSDFLIPQEKTEEFFYTVLDELDLPMTFRESGMLSFRVTPKPDRVDIFVTKSDLDQNLNFDEFTDLSELGDVASMTPDEFFKSLEQTVREKSAPDATAVRHLEEVEQEEEADEEEQERYIYYILEFPTIEDLFTFVGTVDYPVEESELYKMDGHYYLTVLINVENRSKQYPGYILSRMLEFTNDTKLTRPALQEHGTLMLPLAAIEELRKVPTV
>NC_017618.1|WP_012027770.1|1816961_1817798_-|undecaprenyl-diphosphate-phosphatase
MLLELLKAIFLGIIEGVTEWLPVSSTGHLILVQEFVKLNQSKNFLEMFNIVIQLGAILAVMTIYFKKLNPFQPGKTKRDIQLTWQLWAKVVIACIPSILIAVPLDNWFEAHFNFMVPIAIALIVYGIAFIWIENRNRGIEPQVTDLAKMSYKTALLIGCFQVLSIVPGTSRSGATILGAIILGTSRSVAADFTFFLGIPTMFGYSGLKAVKYFLDGNSLNMEQVWILLVASVTAYLVSLVVIRFLTDFVKKHDFTVFGYYRIILGAILLVYAFITFLF
>NC_017618.1|WP_012028491.1|1817924_1819490_+|ABC-transporter-substrate-binding-protein/permease
MKRKLSIFLLTLIAVFSVTTGVRADEYLRVGMEAAYAPFNWTQEDDSNSAVPIEGTNQFANGYDVQVAKKIAASMDKELLVVKTKWEGLVPALTSGKIDMIIAGMSPTEERKKEIAFSDSYYTSIPTLVVRSDSQYANATSLEDFAGAKITAQQGVYLYDLIDQIEGANKQTAMGDFSQIRQALESGIIDAYVSERPEGRTAEAANKAFKMVELADSFETNAEDVTIAVGMRKDDERIAQVNEVLATISEEEQIALMDDMIENQPVEEASEGETPSFFAQVWNIVVNNWQQLLRGTGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGWIINIYIEIFRGTPMIVQSMVIYYGTAQAFGLNLDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTVTRILRAVEKYFDTDTYTTGANQMQVEVPHD
>NC_017618.1|WP_012775335.1|1819482_1820226_+|amino-acid-ABC-transporter-ATP-binding-protein
MTKNVILEIKNLKKSYGQNQVLKDISISVEKGEVISIIGSSGSGKSTFLRSINLLETPTEGQILYHGQDVLAKGYDLTTYREKLGMVFQSFNLFNNLNVLENAIVAQTTVLKRDRAEAEKIAKENLNKVGMTEQYWQAKPSQLSGGQKQRVAIARALSVDPEVILFDEPTSALDPEMVGEVLKTMQDLAKSGLTMLIVTHEMEFARDVSDRVIFMDKGVIAEEGSPQQIFENPQEERTREFLQRFLG
>NC_017618.1|WP_009910800.1|1820351_1820561_-|hypothetical-protein
MTSYEKVAAVVGWVREKKITGYRISKETNAREMSVIALAQGRAKIDNISFATALGLIDFYDKNHKKFEN
>NC_017618.1|WP_012027774.1|1820646_1821549_-|SPFH-domain-containing-protein
MVFGPIVFIGSFLFFVLIALILIASGLYVVKQQTVAIIERFGKYQKTSTSGINFKIPFGVDVIAARIQLRMLQSEIVVETKTQDNVFVTMNVATQYRVNENNVTDAYYKLMHPEAQIKSYIEDALRSSVPKLTLDELFEKKDEIALEVQKQVAEEMSTYGYVIVKTLITKVEPDAEVKQSMNEINAAQRKRVAAQELAEADKIKIVTAAEAEAEKDRLHGVGIAQQRKAIVDGLADSIRELKESNVSLSEEQIMSILLTNQYLDTLNNFAQGGNQTIFLPGNPEGVEDIRTQILSSLRAK
>NC_017618.1|WP_002937416.1|1821558_1822809_-|threonine-ammonia-lyase-IlvA
MITAKNVEQAYSVLKRVVVRTPLDYSRYLSEKYGATIYLKRENEQRVRSFKIRGAYYAISQLTDDEKSRGVVCASAGNHAQGVAYTCQEMQIPATIFMPITTPQQKIGQVKFFGGDYVEIRLVGDTFDESAKAAQDYTQESGKTFIDPFDDENVQAGQGTVAYEILEEAEEQTISFDQILVPIGGGGLVAGVSAYLKEHAPEIKIVGVEASGARSMKAAFDKGRPVKLDQIDKFADGIAVQKVGKSTYEVARKYVDRLIGVDEGWISGTILDLYSKLGIVAEPAGAATIAALEVVKDQIKGQTICCIISGGNNDINRMPEMEERALIYEGIKHYFVVNFPQRPGALREFVNDILGPNDDITRFEYIKRANKGTGPVLIGIALGDKTDYTQFISRLEEFDPQYINLHENDSLYKMLV
>NC_017618.1|WP_009910803.1|1823091_1824114_-|ketol-acid-reductoisomerase
MTVTMQYEKDVTVAALDGKRIAVIGYGSQGHAHAQNLRDTGHDVIIGVRAGKSFDKAKEDGFETFEVAEAAKQADVIMILAPDEIQADLYNEEIAPNLEAGNALGFAHGFNVHFEFIKVPADVDVFMCAPKGPGHLVRRTFEEGFGVPALYAVYQDATGNAKHIAMDWAKGVGSARVGLLETTFKEETEEDLFGEQAVLCGGLTALMQAGFEVLTEAGYAPELAYFEVLHEMKLIVDLVYEGGFKKMRQSISNTAEFGDYVSGPRVITDQVKENMKAVLADIQSGKFANDFVNDYKAGRPRMEAYRKEAENLEIEKVGAELRKAMPFVGRNDDDAFKIYN
>NC_017618.1|WP_009910805.1|1824254_1824731_-|acetolactate-synthase-small-subunit
MRRMLTAKLRNSSGVLNRFTGVLSRRQINIESISVGPTEVDGISRVTVIVDVVSHDEVEQIIKQLNRLIDVVRVRDLTDIPHLEREVILVKISAPPTKRAEILAIIQPFRANVVDVAPHSITIQMTGDGDKIDALLRVIQPYGIKNIARTGATGFSRD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

31437 : 41699

Microbacterium_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012774881.1\|31437_35157_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	8.6e-39	26.9
WP_011921648.1\|35159_36614_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-58	35.4
WP_012774882.1\|36669_37692_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A127KMF9	Cyanophage	1.3e-58	42.7
WP_011922533.1\|37688_38240_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.6e-26	38.5
WP_011921652.1\|38249_39797_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.6e-74	47.6
WP_011921653.1\|39922_41185_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_011921654.1\|41210_41699_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.7e-17	45.0

DBSCAN-SWA_2

543829 : 556942

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011922101.1\|543829_544468_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.0e-125	99.5
WP_014636249.1\|544530_547044_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	A0A1X9I5C8	Streptococcus_phage	0.0e+00	98.4
WP_011922103.1\|547203_548280_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.5e-193	99.2
WP_014636250.1\|548344_549583_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.0e-217	96.6
WP_014636251.1\|549592_550378_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	2.9e-130	95.0
WP_011922106.1\|550400_550805_-	TetR/AcrR family transcriptional regulator	A0A1X9I6A2	Streptococcus_phage	3.2e-64	99.3
WP_002938910.1\|550931_551783_+	DegV family protein	A0A1X9I5J4	Streptococcus_phage	1.3e-152	98.6
WP_014636252.1\|551881_553141_-	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	3.6e-239	98.6
WP_012775019.1\|553263_553998_+	peroxide stress protein YaaA	A0A1X9I5I0	Streptococcus_phage	1.5e-120	99.5
WP_014636253.1\|554102_555542_+	LCP family protein	A0A1X9I5X1	Streptococcus_phage	2.9e-224	98.8
WP_014636254.1\|555565_556255_+	capsular polysaccharide biosynthesis protein CpsC	A0A1X9I5E1	Streptococcus_phage	1.9e-109	95.6
WP_014636255.1\|556264_556942_+	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	2.1e-116	96.4

DBSCAN-SWA_3

654678 : 691018

Streptococcus_phage(97.67%)

portal,capsid,tail,protease,terminase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014636303.1\|654678_656484_+	recombinase family protein	A0A2I4R675	Erysipelothrix_phage	4.3e-153	52.7
WP_002941306.1\|656851_657022_+	hypothetical protein	A0A1X9I6E4	Streptococcus_phage	5.7e-23	100.0
WP_014636304.1\|657408_658626_+	macrolide efflux MFS transporter Mef(A)	A0A1B0RXG2	Streptococcus_phage	3.6e-204	93.1
WP_014636305.1\|658745_660209_+	Msr family ABC-F type ribosomal protection protein	A0A1B0RXA0	Streptococcus_phage	1.0e-253	97.9
WP_014636306.1\|660326_660626_-	hypothetical protein	A0A1B0RX98	Streptococcus_phage	1.8e-48	96.0
WP_014636307.1\|660612_660981_-	hypothetical protein	Q6DMX5	Streptococcus_phage	1.9e-60	98.4
WP_014636308.1\|660977_662393_-	Y-family DNA polymerase	M1Q231	Streptococcus_phage	1.2e-267	97.9
WP_153309563.1\|662397_662538_-	hypothetical protein	Q6DMX3	Streptococcus_phage	2.9e-17	97.8
WP_014636310.1\|662515_662743_-	hypothetical protein	A0A1B0RXB5	Streptococcus_phage	1.1e-37	100.0
WP_014636311.1\|662745_663435_-	helix-turn-helix transcriptional regulator	A0A1B0RXB1	Streptococcus_phage	9.1e-128	100.0
WP_014636313.1\|663710_665534_+	ImmA/IrrE family metallo-endopeptidase	A0A1B0RXB2	Streptococcus_phage	0.0e+00	100.0
WP_014636314.1\|665867_666437_+	hypothetical protein	A0A1B0RXB3	Streptococcus_phage	3.3e-107	100.0
WP_014636315.1\|666475_668431_-	hypothetical protein	A0A1B0RXB4	Streptococcus_phage	0.0e+00	100.0
WP_014636317.1\|668665_669214_-	DUF2815 family protein	A0A1B0RXA9	Streptococcus_phage	4.1e-99	100.0
WP_014636318.1\|669218_670340_-	DUF2800 domain-containing protein	A0A1B0RXB8	Streptococcus_phage	2.2e-219	100.0
WP_014636319.1\|670332_670656_-	hypothetical protein	A0A1B0RXB7	Streptococcus_phage	7.2e-51	100.0
WP_014636321.1\|671054_673340_+	hypothetical protein	A0A1B0RXC5	Streptococcus_phage	0.0e+00	98.4
WP_014636322.1\|673624_673906_+	VRR-NUC domain-containing protein	A0A1B0RXC4	Streptococcus_phage	1.3e-45	97.8
WP_014636323.1\|673886_675263_+	DEAD/DEAH box helicase	A0A1B0RXH8	Streptococcus_phage	1.5e-254	96.3
WP_014636324.1\|675255_675732_+	hypothetical protein	A0A1B0RXB9	Streptococcus_phage	3.6e-83	98.7
WP_014636325.1\|675926_676109_+	hypothetical protein	A0A1B0RXC3	Streptococcus_phage	1.0e-25	98.3
WP_014636326.1\|676153_677191_+	methionine adenosyltransferase	Q6DMV3	Streptococcus_phage	2.4e-188	96.2
WP_014636327.1\|677192_677558_+	HNH endonuclease	A0A1B0RXJ3	Streptococcus_phage	7.3e-68	97.5
WP_014636328.1\|677856_678318_+	hypothetical protein	A0A1B0RXK7	Streptococcus_phage	2.5e-89	100.0
WP_014636329.1\|678289_679543_+	DNA modification methylase	A0A1B0RXJ0	Streptococcus_phage	3.3e-245	100.0
WP_014636330.1\|679542_680133_+	HNH endonuclease	A0A1B0RXJ4	Streptococcus_phage	2.1e-16	100.0
WP_014636331.1\|680129_681404_+	DNA (cytosine-5-)-methyltransferase	A0A1B0RXI8	Streptococcus_phage	3.9e-249	100.0
WP_014636332.1\|681482_681731_+	hypothetical protein	A0A1B0RXJ1	Streptococcus_phage	5.2e-41	100.0
WP_014636333.1\|681732_681945_+	DUF4314 domain-containing protein	A0A1B0RXJ2	Streptococcus_phage	3.1e-34	100.0
WP_003058374.1\|682228_682702_+\|terminase	phage terminase small subunit P27 family	A0A1B0RXI5	Streptococcus_phage	1.6e-86	100.0
WP_014636335.1\|682698_684291_+\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	0.0e+00	99.8
WP_014636336.1\|684350_684653_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	A0A1B0RXK3	Streptococcus_phage	1.2e-47	100.0
WP_014636337.1\|684652_684991_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A1B0RXL8	Streptococcus_phage	1.0e-55	100.0
WP_014636338.1\|685127_685472_+	hypothetical protein	A0A1B0RXK0	Streptococcus_phage	7.6e-59	100.0
WP_014636339.1\|685529_686813_+\|portal	phage portal protein	A0A1B0RXK4	Streptococcus_phage	1.8e-249	100.0
WP_014636340.1\|686805_687501_+\|protease	Clp protease ClpP	A0A1B0RXJ9	Streptococcus_phage	4.6e-127	100.0
WP_014636341.1\|687519_688725_+\|capsid	phage major capsid protein	A0A1B0RXK1	Streptococcus_phage	2.2e-230	100.0
WP_041179162.1\|688727_688985_+\|head,tail	phage gp6-like head-tail connector protein	A0A1B0RXK2	Streptococcus_phage	5.9e-40	100.0
WP_014636343.1\|688984_689323_+\|head,tail	head-tail adaptor protein	A0A1B0RXJ6	Streptococcus_phage	7.5e-59	100.0
WP_014636344.1\|689315_689684_+	hypothetical protein	A0A1B0RXJ7	Streptococcus_phage	5.9e-49	100.0
WP_014636345.1\|689690_690017_+	hypothetical protein	A0A1B0RXK6	Streptococcus_phage	1.2e-56	100.0
WP_014636346.1\|690018_690588_+	hypothetical protein	A0A1B0RXE2	Streptococcus_phage	1.3e-103	100.0
WP_014636347.1\|690598_691018_+	hypothetical protein	A0A1B0RXM7	Streptococcus_phage	3.3e-72	100.0

DBSCAN-SWA_4

694063 : 714510

Streptococcus_phage(100.0%)

tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014636349.1\|694063_694786_+\|tail	phage tail protein	A0A1B0RXL3	Streptococcus_phage	3.1e-134	100.0
WP_014636350.1\|694787_699335_+\|tail	phage tail protein	A0A1B0RXL0	Streptococcus_phage	0.0e+00	100.0
WP_014636351.1\|699347_699554_+	hypothetical protein	M1NSJ5	Streptococcus_phage	1.1e-25	100.0
WP_014636352.1\|699559_699928_+	hypothetical protein	A0A1B0RXK8	Streptococcus_phage	3.1e-66	100.0
WP_014636353.1\|699905_700301_+\|holin	phage holin family protein	A0A1B0RXK5	Streptococcus_phage	2.9e-46	100.0
WP_014636354.1\|700307_701777_+	N-acetylmuramoyl-L-alanine amidase	A0A1B0RXL4	Streptococcus_phage	2.6e-281	100.0
WP_014636355.1\|701999_703241_+	recombinase family protein	A0A1B0RXM0	Streptococcus_phage	3.7e-236	100.0
WP_171935713.1\|703143_704496_+	recombinase family protein	E4ZFN9	Streptococcus_phage	3.9e-255	96.9
WP_014636357.1\|704577_706314_+	hypothetical protein	E4ZFP0	Streptococcus_phage	0.0e+00	100.0
WP_014636358.1\|706955_707615_-	RibD family protein	A0A1B0RXM8	Streptococcus_phage	1.5e-124	99.5
WP_079253078.1\|707725_708133_-	WYL domain-containing protein	A0A1B0RXM3	Streptococcus_phage	2.8e-60	99.2
WP_001079938.1\|708105_708678_-	HTH domain-containing protein	A0A1B0RXM1	Streptococcus_phage	5.5e-102	99.5
WP_001096887.1\|708953_709748_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	E4ZFP6	Streptococcus_phage	2.3e-154	100.0
WP_000627290.1\|709840_710383_-	streptothricin N-acetyltransferase Sat4	A0A1B0RXL7	Streptococcus_phage	8.9e-94	100.0
WP_001255866.1\|710379_711288_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	E4ZFP8	Streptococcus_phage	2.8e-177	100.0
WP_002321849.1\|711592_712330_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	3.7e-135	100.0
WP_011922747.1\|713397_714510_+	UDP-galactopyranose mutase	E4ZFQ1	Streptococcus_phage	2.5e-220	100.0

DBSCAN-SWA_5

758956 : 774301

Streptococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012775040.1\|758956_761194_+	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	1.2e-99	96.7
WP_002935351.1\|761195_761339_+\|transposase	transposase	NA	NA	NA	NA
WP_011922763.1\|761518_762175_+	CBS domain-containing protein	M1NSC5	Streptococcus_phage	2.7e-113	98.6
WP_011922194.1\|762268_763096_+	hypothetical protein	M1PFV6	Streptococcus_phage	1.0e-133	98.5
WP_011922195.1\|763101_764373_+	toxic anion resistance protein	M1PLC8	Streptococcus_phage	1.3e-207	98.1
WP_002935357.1\|764409_765276_-	YitT family protein	M1Q1P6	Streptococcus_phage	4.6e-153	99.7
WP_012775041.1\|765450_766089_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.0e-112	98.1
WP_011922767.1\|766085_766970_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	5.6e-154	98.6
WP_002935361.1\|766989_767307_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.1e-54	100.0
WP_002935362.1\|767308_768172_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.1e-158	99.7
WP_011922200.1\|768641_769733_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.4e-207	100.0
WP_011922201.1\|769732_770290_+	GNAT family acetyltransferase	M1PSC3	Streptococcus_phage	5.9e-93	94.6
WP_014636364.1\|770343_771525_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	2.3e-219	99.5
WP_011922203.1\|771527_772034_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	7.0e-93	97.0
WP_002935368.1\|772017_772371_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.9e-60	100.0
WP_011922204.1\|772387_773287_-	cation transporter	M1Q1N9	Streptococcus_phage	5.1e-163	99.7
WP_012775042.1\|773473_774301_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	2.9e-152	100.0

DBSCAN-SWA_6

935780 : 942810

Bacillus_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014636389.1\|935780_936620_+	thymidylate synthase	U5J9N5	Bacillus_phage	3.9e-88	55.7
WP_014636390.1\|936905_937418_+	dihydrofolate reductase	A0A076GDN3	Bacillus_phage	2.7e-20	36.6
WP_014636391.1\|937615_938842_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.6e-133	59.0
WP_012775089.1\|938897_939485_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_012028095.1\|939507_939921_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	4.3e-24	42.5
WP_011922364.1\|940024_940696_+	membrane protein	A0A1S5SAM6	Streptococcus_phage	3.0e-06	35.2
WP_002943192.1\|940977_942810_+	elongation factor 4	A0A2K9L2P9	Tupanvirus	2.2e-19	38.8

DBSCAN-SWA_7

1320988 : 1326769

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012027298.1\|1320988_1321738_-	ABC-F family ATP-binding cassette domain-containing protein	A0A1B0RXA0	Streptococcus_phage	3.4e-27	32.9
WP_012027299.1\|1321900_1322443_-	ATP-binding cassette domain-containing protein	A0A2I4R674	Erysipelothrix_phage	5.9e-21	35.1
WP_014636426.1\|1322429_1322702_-	hypothetical protein	NA	NA	NA	NA
WP_012027300.1\|1322957_1323761_-	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	2.8e-35	35.6
WP_012027301.1\|1323767_1325117_-	cell wall metabolism sensor histidine kinase VicK	W8CYF6	Bacillus_phage	2.1e-35	34.5
WP_004298854.1\|1325109_1325814_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.1e-38	39.8
WP_012027304.1\|1326007_1326769_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.0e-34	38.4

DBSCAN-SWA_8

1491548 : 1501590

Streptococcus_phage(90.0%)

integrase

attL 1482910:1482924|attR 1509000:1509014

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1482910:1482924	attL	NA	NA	NA	NA
WP_012775260.1\|1491548_1492091_-\|integrase	site-specific integrase	A0A1S5SCL7	Streptococcus_phage	1.1e-80	78.9
WP_014636468.1\|1492077_1492263_-	hypothetical protein	NA	NA	NA	NA
WP_012027449.1\|1492560_1494093_-	primase	A0A1X9I717	Streptococcus_phage	4.9e-105	42.3
WP_012027450.1\|1494107_1494680_-	hypothetical protein	NA	NA	NA	NA
WP_012027451.1\|1494672_1494873_-	hypothetical protein	NA	NA	NA	NA
WP_012775262.1\|1494884_1495088_-	membrane protein	A0A1X9I5T6	Streptococcus_phage	2.4e-20	73.1
WP_012027452.1\|1495108_1495426_-	hypothetical protein	A0A1X9I5Z6	Streptococcus_phage	1.3e-09	41.0
WP_012027454.1\|1495779_1496043_-	hypothetical protein	A0A1S5S7M1	Streptococcus_phage	1.0e-07	43.8
WP_012775263.1\|1496173_1496581_-	hypothetical protein	A0A1X9I5V7	Streptococcus_phage	1.8e-35	52.2
WP_012027456.1\|1496592_1496910_-	hypothetical protein	NA	NA	NA	NA
WP_012027457.1\|1496896_1497118_-	hypothetical protein	NA	NA	NA	NA
WP_012027458.1\|1497114_1497357_-	hypothetical protein	NA	NA	NA	NA
WP_012027459.1\|1497353_1497554_-	hypothetical protein	NA	NA	NA	NA
WP_014636470.1\|1497543_1497834_-	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	1.8e-08	40.7
WP_012027461.1\|1498151_1498340_-	helix-turn-helix transcriptional regulator	R9QNG3	Lactococcus_phage	2.0e-05	42.4
WP_012027462.1\|1498491_1499013_+	helix-turn-helix transcriptional regulator	A0A1X9I723	Streptococcus_phage	8.7e-14	65.1
WP_012028388.1\|1499068_1499761_+	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_012775264.1\|1500447_1501590_+\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	2.5e-69	39.7
1509000:1509014	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_017618

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection