CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NC_017200	Bacillus thuringiensis serovar finitimus YBT-020, complete sequence	3 crisprs	cas3,RT,cas14j,csa3,WYL,cas14k,DinG,Cas14u_CAS-V,DEDDh	3	7
NC_017199	Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28, complete sequence	0 crisprs	RT,csa3	0	2
NC_017201	Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26, complete sequence	0 crisprs	csa3,Cas14u_CAS-V,cas9,RT	0	8

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_017200_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017200_1

527370-527451

Orphan

Consensus_repeat	Method
CTCCTTGAGAACTGCTATCGCCTTTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017200_1

>merge|NC_017200|1|527370-527451|CRISPRCasFinder
CTCCTTGAGAACTGCTATCGCCTTTAACGCGGTTTCCGCCTTGAGAGCCACTGCCTCCTTGAGAACTGCTATCGCCTTTAAC

>NC_017200|1|1|527370-527451|CRISPRCasFinder
CTCCTTGAGAACTGCTATCGCCTTTAAC	GCGGTTTCCGCCTTGAGAGCCACTGC
CTCCTTGAGAACTGCTATCGCCTTTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017200.1\|WP_002078892.1\|521838_522090_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
NC_017200.1\|WP_000146723.1\|530123_530708_+\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
NC_017200.1\|WP_000992549.1\|520550_521783_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NC_017200.1\|WP_001064400.1\|533989_535072_+\|toxic-anion-resistance-protein	unknown	unknown	gnl\|CDD\|377557
NC_017200.1\|WP_000383851.1\|525022_525316_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372929
NC_017200.1\|WP_000817976.1\|519679_519823_+\|hypothetical-protein	unknown	unknown	unknown
NC_017200.1\|WP_000073718.1\|536588_539249_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
NC_017200.1\|WP_000492871.1\|532339_533971_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372988
NC_017200.1\|WP_000738824.1\|522163_523447_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341035
NC_017200.1\|WP_001091219.1\|518973_519288_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NC_017200.1\|WP_000356446.1\|523555_524869_-\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|293742
NC_017200.1\|WP_001254436.1\|519903_520485_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|369830
NC_017200.1\|WP_000394355.1\|519301_519553_+\|hypothetical-protein	unknown	unknown	unknown
NC_017200.1\|WP_000666102.1\|528496_529375_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NC_017200.1\|WP_001121583.1\|529503_530100_+\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
NC_017200.1\|WP_000025694.1\|531438_532230_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|274742
NC_017200.1\|WP_001007531.1\|530787_531366_+\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
NC_017200.1\|WP_001062050.1\|535219_535789_+\|hypothetical-protein	unknown	unknown	unknown
NC_017200.1\|WP_001040954.1\|525663_527094_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236327
NC_017200.1\|WP_000749013.1\|535766_536447_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_017200.1\|WP_002078892.1\|521838_522090_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	2.99749e-19
NC_017200.1\|WP_000146723.1\|530123_530708_+\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	4.87053e-115
NC_017200.1\|WP_000992549.1\|520550_521783_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.68475e-62
NC_017200.1\|WP_001064400.1\|533989_535072_+\|toxic-anion-resistance-protein	gnl\|CDD\|377557	pfam05816, TelA, Toxic anion resistance protein (TelA). This family consists of several prokaryotic TelA like proteins. TelA and KlA are associated with tellurite resistance and plasmid fertility inhibition.	9.00362e-113
NC_017200.1\|WP_000383851.1\|525022_525316_+\|hypothetical-protein	gnl\|CDD\|372929	pfam14150, YesK, YesK-like protein. The YesK-like protein family includes the B. subtilis YesK protein, which is functionally uncharacterized. Its expression is regulated by the sporulation-specific sigma factor sigma-E. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length.	4.26939e-19
NC_017200.1\|WP_000073718.1\|536588_539249_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_017200.1\|WP_000492871.1\|532339_533971_+\|hypothetical-protein	gnl\|CDD\|372988	pfam14266, YceG_bac, Putative component of 'biosynthetic module'. YceG is a family of proteins found in bacteria. Proteins in this family are approximately 540 amino acids in length. YceG is an additional gene-product encoded in the Ter operon and might thus be part of a 'biosynthetic module' encoding certain enzymes.	0
NC_017200.1\|WP_000738824.1\|522163_523447_-\|MFS-transporter	gnl\|CDD\|341035	cd17482, MFS_YxiO_like, Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis MFS-type transporter YxiO, and similar proteins including Listeria monocytogenes BtlA. The function of B. subtilis YxiO is still unknown, and L. monocytogenes BtlA is a putative secondary transporter involved in bile tolerance and general stress resistance. This family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.70873e-157
NC_017200.1\|WP_001091219.1\|518973_519288_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.0736e-14
NC_017200.1\|WP_000356446.1\|523555_524869_-\|alkaline-phosphatase-family-protein	gnl\|CDD\|293742	cd16018, Enpp, Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin. Ecto-nucleotide pyrophosphatases/phosphodiesterases (ENPPs) hydrolyze 5'-phosphodiester bonds in nucleotides and their derivatives, resulting in the release of 5'-nucleotide monophosphates. ENPPs have multiple physiological roles, including nucleotide recycling, modulation of purinergic receptor signaling, regulation of extracellular pyrophosphate levels, stimulation of cell motility, and possible roles in regulation of insulin receptor (IR) signaling and activity of ecto-kinases. The eukaryotic ENPP family contains at least five members that have different tissue distribution and physiological roles.	4.06669e-72
NC_017200.1\|WP_001254436.1\|519903_520485_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|369830	pfam08360, TetR_C_5, QacR-like protein, C-terminal region. This family features the C-terminal region of a number of proteins that bear similarity to the QacR protein, a transcriptional regulator of the TetR family. QacR is able to bind various environmental agents, which include a number of cationic lipophilic compounds, and thus regulate the transcription of QacA, a multidrug efflux pump. The C-terminal region contains the multifaceted, expansive drug-binding pocket, which is composed of several separate, but linked, binding sites.	2.89274e-58
NC_017200.1\|WP_000666102.1\|528496_529375_+\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	3.46366e-73
NC_017200.1\|WP_001121583.1\|529503_530100_+\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	8.62153e-90
NC_017200.1\|WP_000025694.1\|531438_532230_+\|TerC-family-protein	gnl\|CDD\|274742	TIGR03716, R_switched_YkoY, integral membrane protein, YkoY family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains proteins YceF and YkoY from Bacillus subtilis. A transport function is proposed.	9.67578e-89
NC_017200.1\|WP_001007531.1\|530787_531366_+\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	1.28509e-117
NC_017200.1\|WP_001040954.1\|525663_527094_+\|proline--tRNA-ligase	gnl\|CDD\|236327	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional.	0

>NC_017200.1|WP_001040954.1|525663_527094_+|proline--tRNA-ligase
MAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQYVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEEIHNSLFNKAKVFRDENTYSVTKFEEMKKVADEKQGFIKAMWCGELACEEKLKEEVGVSSRCMPFEQEHLADECICCGKEAKQMVYWGKAY
>NC_017200.1|WP_000383851.1|525022_525316_+|hypothetical-protein
MDWLDGFGIFYIIGGITIILVFAISYLLKKRFPDKQFDIIFALSLILLCLASFPVTMMVIGGWEGMGYGFIGFFVLLGTLIGMIAHQLLKISRKSYV
>NC_017200.1|WP_000356446.1|523555_524869_-|alkaline-phosphatase-family-protein
MDKALTNRVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIVTGNYPNKHGVVSNTLLQPGRESPDWHWYRKSIQGTTLYDEAHKANLTTAALLWPVTGRANIDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHIRNGLSQPELDDFVLASAVHTIQTKKPNVMFVHFTDLDTQRHYHGFESKETIAAIHRHDERLGKIIQALKDSGLYEESTIIALGDHSALSENKAIQLNVLFHQKGLISINSKGKLVDWNAYCQSCDGSAYVYVKDKNDTDTIREVQLLLEELLQNKQNGIEFILHDEDAKECGADGNCLFMLEAREGYYFTENYTGDFIKEITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSGITIPYMRLIDEGPTIARLLGLHLGETDGSIVEDLLQL
>NC_017200.1|WP_000738824.1|522163_523447_-|MFS-transporter
MKKMSRQEKSWILYDWANSVYSLVITTALFPIYFKAAAKEAGLSGATSTAYWGYANSFATLLISILAPILGTVADYKGFKKRFFTFFFGLGIVFTSMLAVVPTSQWYLLLGCYMLALVGFAGANIFYDAFLVDVTSEDRMDRISTRGFALGYIGSTIPFIGCIALIILAQKGTIPLSVGIASQISFAITALWWGLFTIPMLKNVEQTHYIERHPRPITMSFKRLADTFKNIKEYKTVFMFLIAYFFYIDGVDTIITMSTAYGTDLGISATNLLIILFVTQIVACPFALLYGKLSETFTGKKMLYVGIIIYIIICTYAYFLKTTLDFWILAMLVATSQGGIQALSRSYFAKLVPKESANEFFGFYNIFGKFAAIMGPVLVGVTTQLTGKTNAGVLSIIVLFLIGGFLLTRVPENHTSVIPPNPKTKTL
>NC_017200.1|WP_002078892.1|521838_522090_+|helix-turn-helix-transcriptional-regulator
MYRLYTNVVKTILHVRRKDVKNQIYELRTENNISQGALADKCKVSRQTINAIENNKYDPSLALAFRLAEVLGTTVDKLFLYKM
>NC_017200.1|WP_000992549.1|520550_521783_+|MFS-transporter
MNALFKNRAFMLVMASDILQQFAIWIRNMALLYFIMERTNNDPVSVSLLSVMEYAPIFIFSFIGGALADRWNPKRTMVAGDVLSVLSIIGIVLLLKLDYWQAIFFATLISAIVGQFSQPSSSRIFKRYVKEEQIANAIAFNQTLQSLFLIFGPVVGSLVYTQLGLFTSLYSLVILFLLSAIALSFLPKWVEKEQVARDSLKNDIKEGWKYVLHTKNLRMITITFTIMGLAVGLTNPLEVFLVIERLGMEKEAVQYLAAADGIGMLIGGIVAAVFASKVNPKKMFIFGMSILAMSFLVEGISTSFWITSFMRFGTGICLACVNIVVGTLMIQLVPENMVGRVNGTILPLFMGAMLIGTSLAGGLKEMTSLVTVFCIAMALILFAIGPVLRMQINKEDVANKEELTSSLASK
>NC_017200.1|WP_001254436.1|519903_520485_+|TetR-family-transcriptional-regulator
MRRSAEEIKKEIAYKAESLFSQKGYAATSMEEICEITERSKGSIYYHFKSKEELFLFVVKQHTYDWLEKWNEKEKLYSTNTEKLYGLAEYHVEDIQQPISNAIEEFSMSQVVSKEILDELLALTRESYVMFEKLIEAGIQSGEFREDNTRDLMYIVNGLLSGLGVLYYELDYKELQRIYKKAIDVLLKGMAAE
>NC_017200.1|WP_000817976.1|519679_519823_+|hypothetical-protein
MKREPKVKNKGKVMLFLLAAGGVFLVKLGFKIGIIHMIRTWFESTFS
>NC_017200.1|WP_000394355.1|519301_519553_+|hypothetical-protein
MEFIIFILLFVVVVTILTAVRSNKKKVNLTKQNNIHNSSNNSSPLFFFAGSDNDSSHGGSHDCGGSSGGDSGGSCDGGGGGGD
>NC_017200.1|WP_001091219.1|518973_519288_+|thioredoxin-family-protein
MNTFETIEELATYVEEQQLVLLFIKTENCGVCDVMLRKVNGLLENYDYVEKVEILLQDMQEIAGRYAVFTGPTVLLFYNGKEILRESRFISLENLERTIQLFED
>NC_017200.1|WP_000666102.1|528496_529375_+|ROK-family-protein
MKEYIAFDIGGTHIKYGIVSEIGTVLKHKTVPTEIHLGGEQIIQKLILLSKKLMGEHKVWGIGISTAGIVDVNKGIVTGGVDHIPGYSMIPIMNRLEDVLKVPVSIDNDVNCAAFGEKWNGSGREKENFIMLTLGTGIGGAIFIDGELYRGHSFSAGEWGNMLIEGKAFEEVASVSGLIHLVRKYKGEGDWNGKTIFELYDKGDREVTQVVEVFFKHLAIGISNLAYIFNPETIIIGGGITARGNEFLKEVKEEVSKYLNKEIYSNCEIELAQNGNCAGMVGAIYHFLHHHK
>NC_017200.1|WP_001121583.1|529503_530100_+|TerD-family-protein
MPIILEKGQKIDLTKGQPKVAKLQVGLGWDPIGQSGGFLSSLFGSKPNVDCDASVVMLEGDRFLNKNDLVYFGNKLSTCGSIIHSGDNLTGEGAGDDETIFVELHKVPSRINRLVFVVNIYDCVNRRQDFGMIRNAYIRIQNPQTGEEFARYNLSDNYAGKTTLIAGEMYRHGSEWKFSAVGEGTQDKNLSEIVSRYQ
>NC_017200.1|WP_000146723.1|530123_530708_+|TerD-family-protein
MASISLKKGQKVDLTKTNPGLSKVLVGLGWDTNRYDGQADFDLDVSIFLVGANGKVSGAEDFVFYNNPKGANGAVEHLGDNRTGEGEGDDESIKVDLKNVPAHIERICFTITIYDGEGRSQNFGQVSNSFVRILDEEKNAELIRYDLGEDFSIETAVVVGELYRHAGEWKFNAIGSGFQGGLASLCNNFGLDVE
>NC_017200.1|WP_001007531.1|530787_531366_+|TerD-family-protein
MAIQLQKGQKIDLGKTSPGLTKAVIGLGWDIKSYDGGADFDLDASAFLLDVNGKCTKETDFIFYNNLQSPCGSVLHTGDNRTGEGEGDDEQLVVDLKKVPADVHKIAITVTIYDAEGRSQNFGQVGNAFVRLANEETNEEVLRFDLGEDFSIETAVVFCELYRHNGQWKFNAVGSGFQGGLGALVRAYGLDA
>NC_017200.1|WP_000025694.1|531438_532230_+|TerC-family-protein
MSILQGILDTYAQFFDLDMWIKVLQDPVSWGLIGTLVVLEGLLSADNALVLAVMVKHLPEEKRKKALFYGLIGAYVFRFIAIGIGMFLIKLAWVKVLGALYLAWLSVKYFIDKRKGNAEEEEAHGMNQNSILFRMFGVFWGTVAMVELMDIAFSVDSVLAAFGVSNEVWILLLGGMLGILMMRGIAGVFLKLLERIPELETTAYILILIIAAKMLLSVIHIEISHTVFFIILVVAFGATFILHYMKNSGQAKEEVAATKEDNK
>NC_017200.1|WP_000492871.1|532339_533971_+|hypothetical-protein
MFSRFTLQPYALKDESDLKQFETLLEKRPQYELTENEMKFSYIACRILGVPNDVDEYFNELFDYSEAKGIEVLHEQNLNKVIDSEKLRHIQEVFGLHQEAPNGLTVNRLVAHLSGKQLLPKVDNPDLQHYIHTTFISVLKLYEKQHNQSLKTEGFRRFLIDMIKLSENYVAKWFSTINYKKQMPRIVWYGDAQESRIYFLYFLIMLGCDVLYYHPEGKDGFENVDEEGRSFIVSHPGRISLEPFPDRRRERVATVAYQASKEIEQVLHHDNSLLYKPWQFRSYTPVARTLKTTYDELFLITKEKAFVRPTFFVENKHIYIPSLFAKISGVSKNDKEYFQRLKAVTSFDNSLLINTFPFTKEQKANFQYHYRDALDRGGKLHPDLIMNSHWWPHKRLPEGLQHGIAEAIIHTCESEMCKPIAKETKQDVALYVFAQLSQIPPNILEQLEKFDYSQDVPKIVIFNNEKSGELTRSDAVLLLFLNQIGVDVFHFNPTGRNDIEPYIEAEAFDSHWLEEVNFDLEFHGSSAYKNLSQTIKGLFRPFL
>NC_017200.1|WP_001064400.1|533989_535072_+|toxic-anion-resistance-protein
MNNPVILDSKTELNEQTAQDVRLQLRQDADVQRIYNAVDIKDQLELIELGKEPSMEISRFADQILHTMSLSKIEDSGELLKQLGKIMDRFDSKDFAEEKSGFFSRMFKKADKMIEQIFSKYQTMGREIDKVYVEITKYQDEMKKSIGTLDGLYEQNLKYYLDLEKYVVAGEMLLERLNTELVPMYEERVRNNDQLAGIELESLKNSVEILEQRIDDLEKARMVALLTAPQIRMIQRGNNKLIGKINTAFITTIPIFKNGIIQAVNAKRQKLVADSMAELDRRTNELLKKNAQNIATQSVEVARLSGSSSIKMETLEETWNIISRGMQETQQIEEQNKREREESRKRMATLTENIKKELQG
>NC_017200.1|WP_001062050.1|535219_535789_+|hypothetical-protein
MNNNDIHEISRKLKDNLKKKGYDEISEHIEGYIKWYEKQYFEEQHLLLYDKEKSKINSKKESYGQMSFDMNQVENNMITKEAKELFTKTVGVIYFYFIEQKRIVSEIQNFFSSEFEISEGKVRLEVMSPDILKKDWMDTQAIQVFEKKYKLEDSGKTILRDIIRIGEDYKLFIDNNLMEKIKNEKIIRG
>NC_017200.1|WP_000749013.1|535766_536447_+|hypothetical-protein
MKKSLEDKIDRFLNSLPNSPSKDLVSSTTDNLYEAYIYVLVAKAFLNDGWDLTHFNINQVTSPSEFVFRTSPGKIWSKHREYSYLVASKDNRSYEVHMGVEIEGKSGIESEIDISVILHQAAEEARNKPREKQVKSIHVPIVIECKCYTSYLNKSLGREFLGLVKDFSAPKNGLRIMATNLNDNLPVATMIRHHGFKFSGNLTPLSSKVRVSSFLGYISESLPNLK
>NC_017200.1|WP_000073718.1|536588_539249_-|cation-translocating-P-type-ATPase
MSNWYSKTKDQTLIDLETNEQHGLTEEIVNGRLKQYGFNELATKQKRTLLQRIFAQINDVLVYVLIIAALISAFVGEWADASIIALVVVLNAVIGVVQESKAEQALEALKKMATPKAIVKRDGELKEIPSEHVVPGDIVMLDAGRYIPCDLRLIETANLKVEESALTGESVPVDKEAIYHPSMQSDEQVPLGDQKNMAFMSTLVTYGRGVGVAVETGMNSQIGKIATLLHEADDDMTPLQKSLAQVGKYLGFVAVVICIVMFLIGFLQGRDTLEMFMTAISLAVAAIPEGLPAIVSIVLAIGVQRMIKQNVIIRKLPAVEALGSVTIICSDKTGTLTQNKMTVTHFYSDNTYDQLENLNVNNDVQRLLLENMVLCNDASYNNESQTGDPTEIALLVAGSTFNMQKDHLKKIHERVNELPFDSDRKMMSTVHTYDESYYSMTKGAIDKLLPRCTHIFKNGKIEVLTDADKDQILEAARSMSQEALRVLSFAFKQYNSNDVDIDHLEENLIFIGLVGMIDPPRTEVKDSITECKKAGIRTVMITGDHKDTAFAIAKELGIAKETSEVMIGTELDNISDTELASKIDHLHVFARVSPEHKVKIVKALRAQGNIVSMTGDGVNDAPSLKQADVGVAMGITGTDVAKGAADVVLTDDNFSSIVKAVEEGRNIYRNIKKSILFLLSCNFGEIITLFLAILLGWATPLRPIHILWVNLITDTLPALSLGVDPEDPDVMKEKPRHAKESLFSGSVPFLIFNGVVIGLLTLIAFIAGAKFYTGDTNLFPLFPERIDEDALLHAQTMAFVVLSFSQLVHSFNLRSRTKSIFSIGIFTNKYLVFSLLIGVLMQVCIISIPPLANIFGVHALTLRDWGFVLLLSIIPLVVNELIKYFR

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Crispr_ID: NC_017200_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017200_2

4486105-4486212

Orphan

Consensus_repeat	Method
TATATCAGCGATTTTTTGAATATATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017200_2

>merge|NC_017200|2|4486105-4486212|CRISPRCasFinder
TATATCAGCGATTTTTTGAATATATCAACCACAACTCGAAATATATCAGCGATTTTCTAAATATATCGACCACAACTCGAAATATATCAGCGATTTTTTAAATATATC

>NC_017200|2|2|4486105-4486212|CRISPRCasFinder
TATATCAGCGATTTTTTGAATATATC	AACCACAACTCGAAATATATCAGCGATTTTCTAAATATATCGACCACAACTCGAAA
TATATCAGCGATTTTTTAAATATATC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017200.1\|WP_001057468.1\|4487542_4487869_-\|bacillithiol-system-redox-active-protein-YtxJ	unknown	unknown	gnl\|CDD\|378538
NC_017200.1\|WP_041184254.1\|4484410_4484773_+\|DUF4288-domain-containing-protein	unknown	unknown	gnl\|CDD\|379479
NC_017200.1\|WP_000738019.1\|4486408_4487425_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227188
NC_017200.1\|WP_001010631.1\|4489717_4490122_-\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|369049
NC_017200.1\|WP_001039704.1\|4481861_4482788_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NC_017200.1\|WP_001103286.1\|4484807_4485806_-\|catabolite-control-protein-A	unknown	unknown	gnl\|CDD\|130546
NC_017200.1\|WP_000636591.1\|4483365_4483638_-\|DUF3917-domain-containing-protein	unknown	unknown	gnl\|CDD\|372449
NC_017200.1\|WP_000023849.1\|4479343_4480798_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NC_017200.1\|WP_000637879.1\|4484172_4484409_+\|DUF3949-domain-containing-protein	unknown	unknown	gnl\|CDD\|315735
NC_017200.1\|WP_000494672.1\|4490686_4491235_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NC_017200.1\|WP_000813336.1\|4499116_4499461_-\|hypothetical-protein	unknown	unknown	unknown
NC_017200.1\|WP_000654739.1\|4488568_4489684_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|225191
NC_017200.1\|WP_000390664.1\|4483789_4484086_+\|hypothetical-protein	unknown	unknown	unknown
NC_017200.1\|WP_000658375.1\|4492994_4494113_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235953
NC_017200.1\|WP_000219470.1\|4491431_4492742_-\|UDP-N-acetylmuramate--L-alanine-ligase	unknown	unknown	gnl\|CDD\|234757
NC_017200.1\|WP_001998456.1\|4487868_4488426_-\|DUF948-domain-containing-protein	unknown	unknown	gnl\|CDD\|227109
NC_017200.1\|WP_103557172.1\|4481083_4481782_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293786
NC_017200.1\|WP_000267018.1\|4482916_4483315_+\|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl\|CDD\|184416
NC_017200.1\|WP_041184149.1\|4485853_4486057_-\|hypothetical-protein	unknown	unknown	unknown
NC_017200.1\|WP_001003095.1\|4490198_4490690_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NC_017200.1\|WP_001057468.1\|4487542_4487869_-\|bacillithiol-system-redox-active-protein-YtxJ	gnl\|CDD\|378538	pfam11009, DUF2847, Protein of unknown function (DUF2847). Some members in this bacterial family of proteins with unknown function are annotated as YtxJ, a putative general stress protein. This cannot be confirmed.	1.67229e-48
NC_017200.1\|WP_041184254.1\|4484410_4484773_+\|DUF4288-domain-containing-protein	gnl\|CDD\|379479	pfam14119, DUF4288, Domain of unknown function (DUF4288). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.	1.36004e-19
NC_017200.1\|WP_001998456.1\|4487868_4488426_-\|DUF948-domain-containing-protein	gnl\|CDD\|227109	COG4768, COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain [General function prediction only].	4.44562e-36
NC_017200.1\|WP_001010631.1\|4489717_4490122_-\|PH-domain-containing-protein	gnl\|CDD\|369049	pfam06713, bPH_4, Bacterial PH domain. This family consists of several hypothetical proteins specific to Oceanobacillus and Bacillus species. Members of this family are typically around 130 residues in length. The function of this family is unknown. Members of this family have a PH domain like structure.	2.65091e-10
NC_017200.1\|WP_001039704.1\|4481861_4482788_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.32362e-50
NC_017200.1\|WP_001103286.1\|4484807_4485806_-\|catabolite-control-protein-A	gnl\|CDD\|130546	TIGR01481, catabolite_control_protein_A, catabolite control protein A. Catabolite control protein A is a LacI family global transcriptional regulator found in Gram-positive bacteria. CcpA is involved in repressing carbohydrate utilization genes [ex: alpha-amylase (amyE), acetyl-coenzyme A synthase (acsA)] and in activating genes involved in transporting excess carbon from the cell [ex: acetate kinase (ackA), alpha-acetolactate synthase (alsS)]. Additionally, disruption of CcpA in Bacillus megaterium, Staphylococcus xylosus, Lactobacillus casei and Lactocacillus pentosus also decreases growth rate, which suggests CcpA is involved in the regulation of other metabolic pathways. [Regulatory functions, DNA interactions].	0
NC_017200.1\|WP_000738019.1\|4486408_4487425_-\|hypothetical-protein	gnl\|CDD\|227188	COG4851, CamS, Protein involved in sex pheromone biosynthesis [General function prediction only].	1.2061e-64
NC_017200.1\|WP_000023849.1\|4479343_4480798_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.05454e-62
NC_017200.1\|WP_000637879.1\|4484172_4484409_+\|DUF3949-domain-containing-protein	gnl\|CDD\|315735	pfam13133, DUF3949, Protein of unknown function (DUF3949). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 69 and 87 amino acids in length.	8.6927e-25
NC_017200.1\|WP_000494672.1\|4490686_4491235_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.70566e-28
NC_017200.1\|WP_000654739.1\|4488568_4489684_+\|aminopeptidase	gnl\|CDD\|225191	COG2309, AmpS, Leucyl aminopeptidase (aminopeptidase T) [Amino acid transport and metabolism].	2.90365e-128
NC_017200.1\|WP_000636591.1\|4483365_4483638_-\|DUF3917-domain-containing-protein	gnl\|CDD\|372449	pfam13055, DUF3917, Protein of unknown function (DUF3917). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length.	1.26871e-23
NC_017200.1\|WP_000658375.1\|4492994_4494113_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|235953	PRK07188, PRK07188, nicotinate phosphoribosyltransferase; Provisional.	0
NC_017200.1\|WP_000219470.1\|4491431_4492742_-\|UDP-N-acetylmuramate--L-alanine-ligase	gnl\|CDD\|234757	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional.	0
NC_017200.1\|WP_103557172.1\|4481083_4481782_+\|hypothetical-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	1.34989e-24
NC_017200.1\|WP_000267018.1\|4482916_4483315_+\|large-conductance-mechanosensitive-channel-protein-MscL	gnl\|CDD\|184416	PRK13955, mscL, large conductance mechanosensitive channel protein MscL.	3.82284e-77
NC_017200.1\|WP_001003095.1\|4490198_4490690_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.31547e-17

>NC_017200.1|WP_041184149.1|4485853_4486057_-|hypothetical-protein
MGYLYFYKKCPFFHKKYENTRKEANFFETFAGKYCMSLRFYRIISKRKNSGRLVTSANRVDVFFSFK
>NC_017200.1|WP_001103286.1|4484807_4485806_-|catabolite-control-protein-A
MNVTIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISNTFYAELARGIEDIATMYKYNIILSNSDQNKEKEFHLLNTMLGKQVDGIVFMGEDITDIHAEEFKKSPVPIVLAASFDEQNETPSVNIDYTQAAYDAMKHFIEQGHKRIGFVSGPFIDKAGSAKKLQGYRKALEEAGISYDENLVIDGDYTYDSGIEAFEKLWSLDEKPTAIFVSSDEMALGVIHAAQDTGLNVPTDVEVLGFDNTRLALMVRPQLSTVVQPMYDIGAVAMRLLTKYMNKEKVEDHTVILPHRIQFRDSTK
>NC_017200.1|WP_041184254.1|4484410_4484773_+|DUF4288-domain-containing-protein
MYAVKLLFESVHSGEPNPTKMDEDYEKDCDTLFEESIILVKASSLEEAHALGEQIAIQSEHTYDNMYGEQVTWTFRKLLHVFELDETPFETGKELYARFLHVKKNETVNTVVKAYYPEYE
>NC_017200.1|WP_000637879.1|4484172_4484409_+|DUF3949-domain-containing-protein
MIWISLIVLAYFIILVPIQYNYIKILKEKQKKMNMSQNELYDNMSYEESQIHYHYQSNVFTIPASLVASIIYKVKHAA
>NC_017200.1|WP_000390664.1|4483789_4484086_+|hypothetical-protein
MEEDIVGYFKQVEKFDYITIDLDKKFFYMEIVQLETNITLLKISLNLDKDETIIAGNVKQYDPSRLEQFIQNFKHTAQTCLAHNLRSPEELFAFWKKN
>NC_017200.1|WP_000636591.1|4483365_4483638_-|DUF3917-domain-containing-protein
MIVLWIITLCMTAIFAYMTLKQNGLKRFVPGSILAGIALITYVISIFIESVSVDMSTSLMFIGITLFASSIMVLMVAGIILFIHMNSETL
>NC_017200.1|WP_000267018.1|4482916_4483315_+|large-conductance-mechanosensitive-channel-protein-MscL
MWNEFKKFAFKGNVVDLAVGVVIGAAFGKIVSSLVKDVITPLLGMVLGGVDFTDLKLTFGKSSIMYGNFIQTIFDFLIIAAAIFMFVKVFNKLTSKKEEEKEEEIPEPTKEEELLSEIRDLLKQQNSSKDRA
>NC_017200.1|WP_001039704.1|4481861_4482788_+|Gfo/Idh/MocA-family-oxidoreductase
MNKPKIGMIGLGSIAQKAYLPTLTKETDWNFVGAFTPNAEKRKQVCQQYRIQDFHSIETLASECDAIFVHSSTASHYEIVSKLLKKGIDVYVDKPLAATVEQAEKLVELSEKYNRKLMVGFNRRFVPMYVAAKEQAHNISWIRIEKHRTNKVGPYTYDFTMLDDYLHIVDTARWLANDELNVVHNMMQINEKNELLYGHHTYTTANGMLLSTAMHRHAGTNLEQIELVTTGKIIRVKNMNTFEVEQENAVSQIGSPSWDTTLKQRGFEDAVHHFIACVQGDTKPVVDGLEGLKTQQLLQSLLDATSKN
>NC_017200.1|WP_103557172.1|4481083_4481782_+|hypothetical-protein
MRRLKFHVQKNSKHDMLRIFLQGCLQEQEVKKEMTNMETALLTATEKQETNTVISLLKKGADINITDNKGRTPLMIATYKNDVKTAKALIDAGADVNIQDDMKNNPFLYAGAEGYLDILKLTIDAGADPSLTNRYGGTALTPASEHGYIDVIKELLTRTNIDVNHVNNLGWTALMEAIVLSNGNETQQQVIRLLIEHGADVNIPDNDGVTPLEHARAHHFEEIEKILLEEHK
>NC_017200.1|WP_000023849.1|4479343_4480798_-|HAMP-domain-containing-histidine-kinase
MSIKTRFLFSYIAVILVSITLILIAGFLIVFSITGDLEAVKNFYKSSYIQKPLTSEEENAYLELKSAAKQHQSQLLDESFVSAIEKEGVKIVVRKGETLSYASNVFESVSLKEALPKFESANINSRGTTELGDTFYRYVKFDFYFPQEEEGSIFVLKKQSSFVDLTQKLFPILFVSLLLLAILLIGLLSYLVSRSVIKPIFVLKDATEKIKEGNLDFQIPVTSHDEIGQLNQGFEEMRKKLKESIEMQTQYEENRKELISNISHDLKTPITSIIGYVEGIKDGVANTPEKMDKYLTTIHTKARHMDTLIDELFLFSKLDLNRVPFQFETVELNMFMQELIEEMQMDLSKEGIEVNLQLHASPLYVKADCEKINRVISNLIHNSVKYMDKEEKKITVTVSSDNNKVIVKVMDNGSGIESDTLPYIFERFYRAEKSRNSSTGGSGLGLAIAKQIIEEHGGNIWAESELGEGTSIFFSLEKVEKCGE
>NC_017200.1|WP_000738019.1|4486408_4487425_-|hypothetical-protein
MKKMALSFAVVSLLLGACSNDTISKKDEVIQKDTKEKSMIPRTAVSKDYYRTVIPLKEQKVINTANVKTNSKLDLAEYENGLMNIAKEQFDTENHVLQLNQYIPEKLVDELVAKVEAPVLTNIIEQDYFGKQNSNELSLSGVVIGLAMSSSVSNEEAMSKGTEVAKQLIEAIHKNDKYNKSPITFAIFKQESTSSLKNGTYIASATVQKNDTNLGNWNAIEEKAYSYPSDEFTQAHGEDNEKINKFAEAMKGFSPGDFIPVNAKVSYKKNQMDTLNMDIVIKYNGKTELMALTQLAAQSMLDQLPKDAKVQLQIKSENKIEAIVIKEKNSDKPFVSFL
>NC_017200.1|WP_001057468.1|4487542_4487869_-|bacillithiol-system-redox-active-protein-YtxJ
MNMTKLETIEELEVLVEKNEPYVLFKHSTTCPISHGAYTEFQAYCSEERAVPAYYLYVQDARDVSNRVAEQYSMKHESPQVLYIKDGMVVWNTSHWNIKKDALEENIK
>NC_017200.1|WP_001998456.1|4487868_4488426_-|DUF948-domain-containing-protein
MYNRGKYEKDKGSDEMQVLLYVSAAIIAVAFAVLVVYVCRTLLSVQKTLENVASTLEGLEKQMQGISVETEQLLHKTNALADDIQQKSQSLNKVVSGVDGIGTTIHSLNTKLRNVSESVTDEIENNADKVAQVVQWSSAAIEVYNHYRATRQEKKVEKEERKLERLEKKAEKKEKRSRLRMRGES
>NC_017200.1|WP_000654739.1|4488568_4489684_+|aminopeptidase
MKDPRIEKLAYNLINYSIRLQKGEKVLIENFGLQKELVTALVKEAYAAGGFPFVSLKDHQVDRSLLMGATEEHFEQIAAYEASVMKDMDAYIGLRSGDNINEQADVPSERMQIHGQTVGKKVHRDIRVPKTRWVVLRYPNASMAQLAKMSTEAFEDFYFEVCNLDYGKMDKAMDSLVTLMNKTDKVRLTGPGTDLTFSIKDIPAIKCSGHLNIPDGEVYSAPVRDSVNGTVSYNTPSPYNGYTFENVQLKFENGQIVEATANDTERINKIFDTDEGARYVGEFAIGVNPYILHPMGDILFDEKIDGSFHFTPGQAYDDAWNGNNSNIHWDLVCIQRPEYGGGEIYFDDVLIRKDGRFVVPELEALNPENLK
>NC_017200.1|WP_001010631.1|4489717_4490122_-|PH-domain-containing-protein
MNFPIQRSKSVVIFVCLTLAFMFVYPLVMIIANKEQWMTALIGMGLCFLVNVPLVWEVFIKKHKVENGVLKYGVLNDDIVLKEIRIIRQVGKSLEITTNAYKVHMIAMPQHMTEFLALIEKENPNVKIEMVGKK
>NC_017200.1|WP_001003095.1|4490198_4490690_-|GNAT-family-N-acetyltransferase
MNEKIHIVPYESTFQEEVVNLIVHIQQKEYNVPITKEEQPDLLEIETFYQRNHGNFWVATYDGKVVGTVALLDIGNHQVALRKMFVKKEFRGKEWGASHKLLQTAISWAKNKKLKDIYLGTTVKFLAAHRFYEKNGFQSVDIEDLPKSFPVLQVDKKFYRYIV
>NC_017200.1|WP_000494672.1|4490686_4491235_-|GNAT-family-N-acetyltransferase
MFTLRVDDEIELQLLEKHHKEELYQLINQNRNHLRRWLPWVDGTKSADAYNEICPMWLKKFAEGDGFESGIRYKGKLVGMVGIHPVSWGKKAASLGYYLAEDAGGKGIMTRSVKAVLHYAFENLKLNKMEIRCGVENVKSRAIPERLGFKLDGILRDEEWLYDHFHDIAVYSLLASEWKEIR
>NC_017200.1|WP_000219470.1|4491431_4492742_-|UDP-N-acetylmuramate--L-alanine-ligase
MTVYHFVGIKGTGMSSLAQILHDMKHTVQGSDYEKRFFTQTALEKRSISILPFDKSNVKEGQVIIAGNAFPDTHEEIVAAKELNIPVHRYHHFLGDLMNQYTSVAVTGAHGKTSTTGLLAHVMQGAHPTSYLIGDGTGHGVENSKYFVFEACEYRRHFLSYNPDYAIMTNIDFDHPDYFTDINDVFSAFQEMALQVKKGIIACGDDEELQKIQAKVPVIFYGFGEDNDFQARNIQKRTDGTIFDVFVRNTYYDTFKITGYGNHSVLNALAVIALCHYENVDVEAVKHQLTTFEGVKRRFNEKPMGEQVIIDDYAHHPTEINATIEAARQKHPEREIVAVFQPHTFSRTEKFLDEFAESLSKADQVYLCDIFGSARENKGELTIEDLQKRIDGAELITDTTTDVLKKHKNGVLIFMGAGDIQKFEAAYVKEVQVAEK
>NC_017200.1|WP_000658375.1|4492994_4494113_-|nicotinate-phosphoribosyltransferase
MKEIELKLKGEINRLTNKTFKFDERVGEGWFSAVYFLKTREIIQEFRPKSVVTMQFFQKENAVLCGTDEVIALLQTFAKNPEELEINSLKDGDKISPFETVLTIHGPYENFGFLEGVIDGILARRTSVATNVYNVVQAARSVDKEKPVIFMGDRDDHYTQQAGDGYAAYIGGMSAQATHAMNEWWGKSGMGTMPHALIQMFNGDVVEAAKAYHKKFPEDELVVLIDYNNDVITDALRVAREFGSTLKGVRVDTSRTMIDQYFIRHPEVLGTFDPRGVNPSLVFALRKALDEEGFQHVDIVVTGGFDEKRIREFEAQNVPVDIYGVGSSLLKMNIGFTGDNVELNGKPEAKAGRKYRPNPRLERVQLEKREDM
>NC_017200.1|WP_000813336.1|4499116_4499461_-|hypothetical-protein
MKQQPKIAELLKRIETSKQQDIELGTYEIYLFSENELEKGQIGYRYDKHQNSLISEEHGKWKDEWIVIGYETDMGDPVFVNIDDDAYPVYTAERGTELWQPVHIGNMDEIIKQL

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Click the colored protein region to show detailed information

Crispr_ID: NC_017200_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017200_3

5186356-5186547

Orphan

Consensus_repeat	Method
TCNTCNTCNTCTTCGTCT	CRT

4 spacers

The CRISPR arrays of NC_017200_3

>merge|NC_017200|3|5186356-5186547|CRT
TCTTCCTCTTCTTCTTCTTCAGTTTCATCATACTCAAGTTCTTCTTCAGCGAAGTCATCTTCATCTTCGTCTAAATCATCAAGATCATCGTCGTCTCCGTCTTCGTCTTCAAGAACCTTGTCCAAATCTTCTACATCATCATCTTCGTCTTCATTTCCGTCTACATCATCAAAGTCATCTTCATCTTCGTCA

>NC_017200|3|1|5186356-5186547|CRT
TCTTCCTCTTCTTCTTCT	TCAGTTTCATCATACTCAAGTTCTTCTTCAGCGAAG
TCATCTTCATCTTCGTCT	AAATCATCAAGATCATCG
TCGTCTCCGTCTTCGTCT	TCAAGAACCTTGTCCAAATCTTCT
ACATCATCATCTTCGTCT	TCATTTCCGTCTACATCATCAAAG
TCATCTTCATCTTCGTCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_017200.1\|WP_113711308.1\|5190995_5192192_-\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|181311
NC_017200.1\|WP_001086786.1\|5192286_5194398_-\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|223325
NC_017200.1\|WP_000280863.1\|5176482_5177070_-\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NC_017200.1\|WP_000887065.1\|5175019_5176087_-\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NC_017200.1\|WP_000170453.1\|5184483_5186091_-\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
NC_017200.1\|WP_000465733.1\|5194704_5195898_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NC_017200.1\|WP_000605892.1\|5195930_5196884_+\|UV-DNA-damage-repair-endonuclease-UvsE	unknown	unknown	gnl\|CDD\|235029
NC_017200.1\|WP_001011168.1\|5188891_5190022_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
NC_017200.1\|WP_000442333.1\|5179587_5180553_-\|class-II-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236536
NC_017200.1\|WP_014481799.1\|5197012_5199691_+\|DUF4084-domain-containing-protein	unknown	unknown	gnl\|CDD\|372562
NC_017200.1\|WP_000912424.1\|5183928_5184453_+\|DUF2529-domain-containing-protein	unknown	unknown	gnl\|CDD\|378487
NC_017200.1\|WP_001131850.1\|5182290_5183148_-\|fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|169068
NC_017200.1\|WP_000398594.1\|5183358_5183727_-\|sporulation-initiation-phosphotransferase-Spo0F	unknown	unknown	gnl\|CDD\|381105
NC_017200.1\|WP_000643437.1\|5177178_5177424_-\|type-B-50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234969
NC_017200.1\|WP_000238604.1\|5187036_5187666_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NC_017200.1\|WP_000413260.1\|5180669_5181959_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|183779
NC_017200.1\|WP_001053898.1\|5177876_5179148_-\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NC_017200.1\|WP_000734741.1\|5199708_5199855_-\|cell-cell-signaling-protein-PapR	unknown	unknown	gnl\|CDD\|368687
NC_017200.1\|WP_000116034.1\|5190094_5190946_-\|3-hydroxybutyryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|180269
NC_017200.1\|WP_000545533.1\|5187730_5188870_-\|acyl-CoA-dehydrogenase-AcdA	unknown	unknown	gnl\|CDD\|173847

Protein	Function_ID	Function_description	E-value
NC_017200.1\|WP_113711308.1\|5190995_5192192_-\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|181311	PRK08235, PRK08235, acetyl-CoA C-acetyltransferase.	0
NC_017200.1\|WP_001086786.1\|5192286_5194398_-\|(Fe-S)-binding-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	1.04433e-93
NC_017200.1\|WP_000280863.1\|5176482_5177070_-\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	2.84427e-104
NC_017200.1\|WP_000887065.1\|5175019_5176087_-\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NC_017200.1\|WP_000170453.1\|5184483_5186091_-\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NC_017200.1\|WP_000465733.1\|5194704_5195898_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	1.2226e-110
NC_017200.1\|WP_000605892.1\|5195930_5196884_+\|UV-DNA-damage-repair-endonuclease-UvsE	gnl\|CDD\|235029	PRK02308, uvsE, putative UV damage endonuclease; Provisional.	3.30351e-166
NC_017200.1\|WP_001011168.1\|5188891_5190022_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
NC_017200.1\|WP_000442333.1\|5179587_5180553_-\|class-II-fructose-bisphosphatase	gnl\|CDD\|236536	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed.	0
NC_017200.1\|WP_014481799.1\|5197012_5199691_+\|DUF4084-domain-containing-protein	gnl\|CDD\|372562	pfam13321, DUF4084, Domain of unknown function (DUF4084). This family of Firmicute proteins is frequently associated with the EAL, GGDEF and PAS families, pfam00563, pfam00990, and pfam00989. The exact function is not known.	0
NC_017200.1\|WP_000912424.1\|5183928_5184453_+\|DUF2529-domain-containing-protein	gnl\|CDD\|378487	pfam10740, DUF2529, Domain of unknown function (DUF2529). This domain is conserved in the Bacillales. The function is not known, but given this domains relationship to the SIS domain it may carry out a sugar isomerase reaction. Several members are annotated as being YWJG, a protein expressed downstream of pyrG, a gene encoding for cytidine triphosphate synthetase.	6.6281e-75
NC_017200.1\|WP_001131850.1\|5182290_5183148_-\|fructose-bisphosphate-aldolase	gnl\|CDD\|169068	PRK07709, PRK07709, fructose-bisphosphate aldolase; Provisional.	0
NC_017200.1\|WP_000398594.1\|5183358_5183727_-\|sporulation-initiation-phosphotransferase-Spo0F	gnl\|CDD\|381105	cd17553, REC_Spo0F-like, phosphoacceptor receiver (REC) domain of Spo0F and similar domains. Spo0F, a stand-alone response regulator containing only a REC domain with no output/effector domain, controls sporulation in Bacillus subtilis through the exchange of a phosphoryl group. Bacillus subtilis forms spores when conditions for growth become unfavorable. The initiation of sporulation is controlled by a phosphorelay (an expanded version of the two-component system) that consists of four main components: a histidine kinase (KinA), a secondary messenger (Spo0F), a phosphotransferase (Spo0B), and a transcription factor (Spo0A). REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.77706e-64
NC_017200.1\|WP_000643437.1\|5177178_5177424_-\|type-B-50S-ribosomal-protein-L31	gnl\|CDD\|234969	PRK01678, rpmE2, type B 50S ribosomal protein L31.	3.07711e-51
NC_017200.1\|WP_000238604.1\|5187036_5187666_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	8.86765e-14
NC_017200.1\|WP_000413260.1\|5180669_5181959_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|183779	PRK12830, PRK12830, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed.	0
NC_017200.1\|WP_001053898.1\|5177876_5179148_-\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NC_017200.1\|WP_000734741.1\|5199708_5199855_-\|cell-cell-signaling-protein-PapR	gnl\|CDD\|368687	pfam05968, Bacillus_PapR, Bacillus PapR protein. This family consists of the Bacillus species specific PapR protein. The papR gene belongs to the PlcR regulon and is located 70 bp downstream from plcR. It encodes a 48-amino-acid peptide. Disruption of the papR gene abolishes expression of the PlcR regulon, resulting in a large decrease in haemolysis and virulence in insect larvae. A processed form of PapR activates the PlcR regulon by allowing PlcR to bind to its DNA target. This activating mechanism is strain specific.	5.42963e-06
NC_017200.1\|WP_000116034.1\|5190094_5190946_-\|3-hydroxybutyryl-CoA-dehydrogenase	gnl\|CDD\|180269	PRK05808, PRK05808, 3-hydroxybutyryl-CoA dehydrogenase; Validated.	0
NC_017200.1\|WP_000545533.1\|5187730_5188870_-\|acyl-CoA-dehydrogenase-AcdA	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0

>NC_017200.1|WP_000170453.1|5184483_5186091_-|CTP-synthase
MTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLNVTIQKFDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKYSNVTTGKIYSSVLQKERRGEYLGGTVQVIPHITNEIKERVYRSGRETNADVVITEIGGTVGDIESLPFLEAIRQIKSDIGRDNVMYIHCTLIPYLKAAGEMKTKPTQHSVKELRSLGIQPNIIVVRTEMPVSQDMKDKLALFCDIDTKAVIEARDADTLYAVPLSLQEQNMDQIVCDHLKLDNPAADMTEWTALVEKVRNLSKKTKIALVGKYVELQDAYISVVEALRHAGYSFDTDVEVKWVNAEHVTAENVQELVGDTDGILVPGGFGDRGVEGKIVAIQYARENKVPFLGICLGMQLASIEFARNVLGLEGANSSEINPDTPYAIIDLLPEQKDVEDLGGTLRLGLYPCKLAEETNAYNAYNEPVVYERHRHRYEFNNQFRPDMEKAGFVFSGTSPDGRLVEIVELKDHPWFVAAQFHPELVSRPNRPQPLFHDFVRASITNKESK
>NC_017200.1|WP_000912424.1|5183928_5184453_+|DUF2529-domain-containing-protein
MLKIFSTQLSGYFSRVSQKEEMNIEDSARLLAQALVGEGFIYLHGTNEMEGVVAEALFGTEPMKQAKRLFENGKEVEVTSADRVLLISRFSTDEEVVAIAKKLQADGHSIVGISAIQEGNESLEQYTDVHIDTKLLKGLIPDDEGNRYGFPSLMIALFAYHGIKFTIDEMLNEY
>NC_017200.1|WP_000398594.1|5183358_5183727_-|sporulation-initiation-phosphotransferase-Spo0F
MEGKILIVDDQYGIRVLLHEVFQKEGYQTFQAANGFQALDIVKKDNPDLVVLDMKIPGMDGIEILKHVKEIDESIKVILMTAYGELDMIQEAKDLGALMHFAKPFDIDEIRQAVRNELAVEA
>NC_017200.1|WP_001131850.1|5182290_5183148_-|fructose-bisphosphate-aldolase
MPLVSMKEMLNKALEGKYAVGQFNMNNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSNGKA
>NC_017200.1|WP_000413260.1|5180669_5181959_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MEKLLIEGGRALNGTIRVSGAKNSAVALIPATILADTPVTIGGVPNISDVKMLGDLLEEIGGRVTYGQEEEMVVDPSNMVAMPLPNGKVKKLRASYYLMGAMLGRFKKAVIGLPGGCHLGPRPIDQHIKGFEALGAHVTNEQGAIYLRADELRGARIYLDVVSVGATINIMLAAVRAKGRTVIENAAKEPEIIDVATLLTSMGARIKGAGTDVIRIDGVDSLHGCHHTIIPDRIEAGTYMILGAASGGEVTVDNVIPQHLESVTAKLREAGVQVETNDDQITVNGDRRLKVVDIKTLVYPGFPTDLQQPFTTLLTKAHGTGVVTDTIYGARFKHIDELRRMNAQIKVEGRSAIVTGPVLLQGAKVKASDLRAGAALVIAGLMADGITEVTGLEHIDRGYENIVDKLKGLGANIWREQMTKQEIEEMKNA
>NC_017200.1|WP_000442333.1|5179587_5180553_-|class-II-fructose-bisphosphatase
MERSLSMELVRVTEAAALSSARWMGRGKKDEADGAATSAMRDVFDTIPMKGTVVIGEGEMDEAPMLYIGEKLGTGYGPRVDVAVDPLEGTNIVAAGGWNALAVIAIADHGNLLHAPDMYMDKIAVGPEAVGAVDIDAPIIDNLRAVAKAKNKDIEDVVATVLNRPRHQAIIEEIRKAGARIKLINDGDVAGAINTAFDRTGVDILFGSGGAPEGVLAAVALKCLGGEIHGKLLPQNDAELARCKKMGIDDINRILRMEDLVKGDDAIFAATGVTDGELLRGVQFKGSVGTTQSLVMRAKSGTVRFVDGRHSLNKKPNLVIK
>NC_017200.1|WP_001053898.1|5177876_5179148_-|transcription-termination-factor-Rho
MNLSIAALENMKLKELYELAKEFKISYYSKLTKKELIFAILKARAEKEGFFFMEGVLEIIQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAVNGDDPESAKERVHFPALTPLYPDRQMKLETEPKKLPTRIMDLIAPVGFGQRGLIVAPPKAGKTSLLKEIAHSVTTNHPEAELIVLLIDERPEEVTDIERSVKGDVVSSTFDEVPENHIKVAELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRRSGTRKEDLLIPKEHLDKLWGIRKTMRDTPDFVEGFLRKLRQTKTNEEFLQNIVADSKRYVTTK
>NC_017200.1|WP_000643437.1|5177178_5177424_-|type-B-50S-ribosomal-protein-L31
MKAGIHPDYKKVVFMDTNTGFKFLSGSTRGSNETVEWEDGNTYPLLKVEISSDSHPFYTGRQKFATADGRVDRFNKKYGLK
>NC_017200.1|WP_000280863.1|5176482_5177070_-|thymidine-kinase
MYLINQNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEPRCRHCHAVPTNQDK
>NC_017200.1|WP_000887065.1|5175019_5176087_-|peptide-chain-release-factor-1
MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAMLEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRMEAAE
>NC_017200.1|WP_000238604.1|5187036_5187666_-|TetR/AcrR-family-transcriptional-regulator
MVKHNVHASVKDEKLVALRREQMIKGAVQLFKQKGFPRTTTREIAKAAGFSIGTLYEYIRTKDDVLYLVCDSIYEHVKERLEEVVCTEKGSVESLKIAITNYFKVMDELQEEVLIMYQEVRFLPKESLPYVLEKEFQMVGMFENILEQCTENGTFTLNKKEIQLLAHNIFIQGQMWGFRRWALQKLYTLEEYTDMQIRYVLQGAHMLPK
>NC_017200.1|WP_000545533.1|5187730_5188870_-|acyl-CoA-dehydrogenase-AcdA
MHFKLSEEHEMIRKMVRDFAKNEVAPTAAERDEEERFDRALFDQMAELGLTGIPWPEEYGGIGSDYLAYVIAIEELSRVCASTGVTLSAHTSLAGWPIFKFGTEEQKQTFLRPMAEGKKIGAYGLTEPGSGSDAGGMKTIAKRDGDHYVLNGSKIFITNGGIADIYVVFALTDPESKQRGTSAFIVESDTPGFSVGKKESKLGIRSSPTTEIMFEDCRIPVENLLGEEGQGFKIAMQTLDGGRNGIAAQAVGIAQGALDASVEYARERHQFGKPIAAQQGIGFKLADMATDVEAARLLTYQAAWLESEGLPYGKESAMSKVFAGDAAMKVTTEAVQVFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLTK
>NC_017200.1|WP_001011168.1|5188891_5190022_-|acyl-CoA-dehydrogenase
MNFRFNEEQQMMRKMVRDFAQKEIAPFVPSMEQGVFPKEILQKMGELGLMGIPAPAKYGGAEMDFISYILAIEEISKVSATVGVILAVHTSVGMNPILYFGTEEQKEKYVSKLATGEYLGAFALTEPNAGSDAGSLKSRAVKKGDHYIINGSKVFITNGGEASTYIVFASTNPEAGKSGISAFIVEKDTPGLIIGKDEHKMGLLGSRTVQLTFEDMKVPAENLLGEEGQGFKVAMANLDVGRIGIGAQALGIAEAALACAIDYAKEREQFGKPIAAQQGIGFKLADMATSVEAARLLVYRAASLRAQGLPCGKEASIAKLFASKTAVEVAIEAVQVFGGYGYTKDYPVERFFRDAKITQIYEGTSEIQKLVISRAL
>NC_017200.1|WP_000116034.1|5190094_5190946_-|3-hydroxybutyryl-CoA-dehydrogenase
MSVQKIVVIGAGQMGSGIAQVCAMAGYDVKVQDLKQEQLDRGLAIITKNLARQVEKGRMKEEEKEATLSRLAVTLDLDCVKEADLIIEAAVEKMDIKKKIFANLDEIAPEHAILATNTSSLPITEIAAVTKRPEKVIGMHFMNPVPVMKLVEIIRGLATDDAVYETIEDITKKIGKVPVEVNDFPGFVSNRILLPMINEAIYTLYEGVATKEAIDEVMKLGMNHPMGPLTLADFIGLDTCLYIMEVLHEGLGDSKYRPCPLLRKYVNAGWLGRKTGRGFYVYE
>NC_017200.1|WP_113711308.1|5190995_5192192_-|acetyl-CoA-C-acetyltransferase
MGERGMSKTVILSAARTPVGKFGGSLKDVKATELGGIAIKAALERANVSASDVEEVIFGTVIQGGQGQIPSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRTGDQSLIVAGGMESMSNSPYILRGARWGYRMGNNEVVDLNIADGLTCAFSGIHMGVYGGEVAKEDGISREAQDEWAYRSHQRAVSAHNEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRADTTIEKLAKLKPVFDKTATVTAGNAPGLNDGGAALVLMSEDRAKQEGRKPLATILAHTAIAVESKDFPRTPGYAINALLEKTGKTIEDIDLFEINEAFAAVAIASTEIAGIDPEKLNVNGGAVAMGHPIGASGARIIVTLIHALKQRGGGIGIASICSGGGQGDAVMIEVH
>NC_017200.1|WP_001086786.1|5192286_5194398_-|(Fe-S)-binding-protein
MNSLLIMNWLAAIAVIAYAGYLFVYLIRTRMAYIQLGKKIEFDRRFKERWDLLKVNVFGQKKLLKDKKSGIIHVMFFYGFILVQFGAIDFVWKGLAPGSHLPLGPLYPAFTFFQEIVTLVILIAVFWAFHRRYVEKLVRLKRNFKSGLVLIFIGGLMISVLLGNGMGIIWHGEELSWSEPIASAIAYVFSGINETAAISVFYFSWWVHLLILLTFLVYVPQSKHAHLIAGPANVFFGRLSNPGKLEKIDFEDETQETFGVGKIEDFRQNQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILKLRDHLTDKGAAVTSKAPWVPVVAFNNTQGNQLAMMAAGKGQQESAAATLAYDPSLIGDIITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVLTEGKMDAEAQRAMTNIERQGNPWGLNRKERETWRQGDDEVTVPTVKEKSKAGEEFEYLFWVGSMGSYDNRSQKIAISFAKLMNEAGISFAILGNKEKNSGDTPRRLGNEFVFQEMATKNIEEFEKAGVKKIVTIDPHAYNTFKNEYPDFGLQAEVYHHTELLAQWVKEGRLKPVHAIEETVTYHDSCYLGRYNEVYEAPRDILKAIPGVNLVEMARNRETGMCCGAGGGLMWMEETTGSRINVARTEQALAVQPSIIGTGCPYCLTMISDGTKAKEVEEKVQTLDVTEILERSVIGQKKEAI
>NC_017200.1|WP_000465733.1|5194704_5195898_+|cardiolipin-synthase
MFFLPLLLIGIALWIVIDFSYGRIVHLRRVRSRSFPLRQSDFHLYTYGKDLYDTLFTDIKQAKHHVHVLFFIVKNDKISREFLKLLIDKAKEGIEVRLLLDRLGSHHLSNEAVRSLQKHGVSFSFCHKVKFPFPFFSANQRNHRKITVIDGKIGYIGGFNIGEEYLGHNERLGLWRDYHLRLTGEGVQDLQKQFLHDWFDDTNQNLLDASLYFPKQQPGTIEHQFIPTDGAYLQHTFLHLIEGAKKELFIGTPYFIPGRKIMNALLEARKRGVQITILVPEKADHPLVREAKFPYCRKLIQAGCNIYAFQQGFFHAKVIIVDDYICDIGTANFDMRSLYINHEINCLLYDEHFIQTVKNKFHEDLENASLLSLKDVSPNSLINRGKEWIGTILAFFL
>NC_017200.1|WP_000605892.1|5195930_5196884_+|UV-DNA-damage-repair-endonuclease-UvsE
MIMRFGYVSHAMALWDCSPAKTMTFTSFQKLSKQEREDKLYDVTRQNLEHTIRILHYNIAHEIPLYRLSSSIVPLATHPEVEFDYIGLFTPLWRTIGALIKEHNLRVSFHPNQFTLFTSDKPHITTNAITDMTYHYKVLDAIGIADSSYINIHVGGAYGNKEKAVERFHENIKKLPAHIKRQMTLENDDKTYTTAETLSICQKEKIPFVFDYHHHMANLCEEPLEELLPAIFETWSHTNIVPKVHISSPKSKKEFRAHAEYIDLEFIKPFLHVAKKINHNFDIMIESKQKDLAMLQFIHELSSIRGVKRISSSTLQW
>NC_017200.1|WP_014481799.1|5197012_5199691_+|DUF4084-domain-containing-protein
MINQKKYVHFVIMYIIIFSLWIFLIPKDLNIKEIGILFLFCFATLFSCYCLYKAIKKMKRGDKLFWVLVLCTCLCGLTMEITLFLHSLSIYDQVIFSYKALPFFIVQYILLFSGFAIKFIKHYSIRGLAQFSFDSIFIVIMNIYFTLTFILDISSFRMLTTDTWVLIGYFIAQSLVIYAVISLYRREEYSSSRISLIIGFTIILVYGYIHLFQLNTGIKPSSEVSYLIHTASILLIGLSSILYILDKPIQHETKTKYYRFDYVRFILPYFSIIITFSFIIFQPWDDKFMLIGLVLSLILLFLRQLYMWKDNQALIDTYEQLTTQLEDKVEEGASALSKSEQRYKSLFEDHPDAVFSLNMYGIFQQSNTACESLFTAYYCEVESYSLLHFIDLKDHDLLKKALQLTKEGRPQTLEIRTKEKEGYYYYLHITLIPTFINKEVVGMFGIARDITTLYEKQKQVEHLAFHDALTGLPNRRKFEKDLKNILNTAQTSANDVAVMFLDLDRFKKINDRLGHDVGDLLLIEVAKRLRSCLRSKDVVARQGGDEFTILLPDMYSEKSAAFIAEQILTILNKPFFIKDEELSITPSIGIAMYPDCGTDVTELMKNADMAMYRAKANGKNRFVFFSKEMSIAQNESNFLEGELSKALQQNEFFLEYQPQVSTKTKQVIGFEALIRWKHPKLGIVSPAQFIPLAEETGFIIELGNWILRTACLEAKRWHNQGFSHLKVGVNLSVVQFNHADLIPTISKVLEETELKPEALDIEITESIAINQNQSVVAKLEQLQNLGIQISIDDFGTGYSSLAYLTKYPINTLKIAREFICGITTSPLEEAIISSIITLSKELNLEVIAEGVETEEQWKFLYEQNCDHIQGFFISKPVSSKDVWRLLHKKTTV
>NC_017200.1|WP_000734741.1|5199708_5199855_-|cell-cell-signaling-protein-PapR
MKKLLIGSLLTLAMAWGISLTDTALEKSQVISHNDQEVQLASDLPFEY

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017200_3	3.3\|5186464\|24\|NC_017200\|CRT	5186464-5186487	24	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	270501-270524	2	0.917
NC_017200_3	3.4\|5186506\|24\|NC_017200\|CRT	5186506-5186529	24	NZ_CP009619	Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence	135702-135725	2	0.917
NC_017200_3	3.3\|5186464\|24\|NC_017200\|CRT	5186464-5186487	24	NZ_CP014203	Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence	65429-65452	3	0.875
NC_017200_1	1.1\|527398\|26\|NC_017200\|CRISPRCasFinder	527398-527423	26	MT764845	Ruegeria phage Tedan, complete genome	50561-50586	5	0.808

1. spacer 3.3|5186464|24|NC_017200|CRT matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 2, identity: 0.917

tcaagaaccttgtccaaatcttct	CRISPR spacer
tcaagaaccttgttcaactcttct	Protospacer
*************.*** ******

2. spacer 3.4|5186506|24|NC_017200|CRT matches to NZ_CP009619 (Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence) position: , mismatch: 2, identity: 0.917

tcatttccgtctacatcatcaaag	CRISPR spacer
tcattgctgtctacatcatcaaag	Protospacer
***** *.****************

3. spacer 3.3|5186464|24|NC_017200|CRT matches to NZ_CP014203 (Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence) position: , mismatch: 3, identity: 0.875

tcaagaaccttgtccaaatcttct	CRISPR spacer
tcaagaaccttgtcaatatcttca	Protospacer
************** * ******

4. spacer 1.1|527398|26|NC_017200|CRISPRCasFinder matches to MT764845 (Ruegeria phage Tedan, complete genome) position: , mismatch: 5, identity: 0.808

gcggtttccgccttgagagccactgc	CRISPR spacer
gcgttttccgccttgagagcctcaaa	Protospacer
*** ***************** * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

331487 : 339860

Synechococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000625677.1\|331487_332795_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.9e-21	25.5
WP_001170542.1\|332883_333603_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	5.2e-49	44.3
WP_000278826.1\|333595_333850_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_000666779.1\|333846_334530_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_000055576.1\|334513_336733_+	phosphoribosylformylglycinamidine synthase II	A6N228	Microbacterium_phage	1.7e-162	41.2
WP_000879024.1\|336717_338133_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.3e-55	35.4
WP_001262432.1\|338235_339276_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	7.2e-68	45.9
WP_000088582.1\|339272_339860_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	5.9e-27	37.1

DBSCAN-SWA_2

360231 : 468055

112

Bacillus_phage(59.65%)

tRNA,tail,terminase,protease,transposase,portal,integrase,head,capsid

attL 394067:394083|attR 444897:444913

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001133494.1\|360231_361422_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.1e-30	37.9
WP_001254394.1\|362137_362374_+	hypothetical protein	NA	NA	NA	NA
WP_000086999.1\|362515_362806_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_000051445.1\|362821_364279_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_001047674.1\|364293_365721_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_000977677.1\|366342_367248_+	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	2.8e-28	30.1
WP_103557176.1\|367505_367769_+	hypothetical protein	NA	NA	NA	NA
WP_000991108.1\|367790_369089_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	7.9e-40	31.8
WP_000416643.1\|369357_370104_+	HAD family hydrolase	NA	NA	NA	NA
WP_000890595.1\|370183_371623_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	NA	NA	NA
WP_000225165.1\|371739_373107_+	AAA domain-containing protein	NA	NA	NA	NA
WP_000358102.1\|373099_374551_+	NADP-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000263255.1\|374598_374922_+	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_001020656.1\|376010_377240_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014481551.1\|377687_379067_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_000695082.1\|379063_380149_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA
WP_000243160.1\|380162_381257_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA
WP_080559611.1\|381219_382002_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA
WP_000923699.1\|382002_383367_+	hypothetical protein	NA	NA	NA	NA
WP_014481552.1\|383380_384361_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA
WP_000705618.1\|384372_385662_+	hypothetical protein	NA	NA	NA	NA
WP_000794852.1\|385698_386964_+	MFS transporter	NA	NA	NA	NA
WP_000007360.1\|388031_389261_-	aminopeptidase	NA	NA	NA	NA
WP_001233742.1\|389377_390460_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_001200502.1\|390633_391830_-	NupC family nucleoside transporter	NA	NA	NA	NA
WP_142285828.1\|392233_393634_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	1.7e-117	46.5
WP_000679461.1\|393692_394817_-\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	3.7e-211	97.9
394067:394083	attL	NA	NA	NA	NA
WP_001043967.1\|395074_395536_+	DUF4429 domain-containing protein	A0A1S5S992	Streptococcus_phage	1.1e-17	46.4
WP_014481553.1\|395663_396008_-	helix-turn-helix transcriptional regulator	A0A1B1P888	Bacillus_phage	5.4e-20	45.5
WP_000609384.1\|396498_397698_+	hypothetical protein	A0A0S2MVK2	Bacillus_phage	1.6e-63	38.0
WP_000427703.1\|398194_398557_-	helix-turn-helix domain-containing protein	A0A0A7AR52	Bacillus_phage	1.0e-21	43.9
WP_000163953.1\|398725_398929_+	helix-turn-helix transcriptional regulator	A0A0A7AQV9	Bacillus_phage	6.8e-15	61.2
WP_001072906.1\|398995_399727_+	Rha family transcriptional regulator	A0A1B1P7T7	Bacillus_phage	2.6e-125	91.8
WP_000798612.1\|399771_400122_+	helix-turn-helix domain-containing protein	A0A1B0T6C2	Bacillus_phage	3.0e-50	80.2
WP_001151929.1\|400496_401381_+	hypothetical protein	A0A0U3TZZ4	Bacillus_phage	1.9e-146	96.3
WP_001171105.1\|401395_402310_+	AAA family ATPase	A0A0U3U1U1	Bacillus_phage	8.3e-169	98.4
WP_000332460.1\|402322_402517_+	hypothetical protein	A0A1B1P7U7	Bacillus_phage	6.9e-25	85.9
WP_000799084.1\|402532_402811_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	1.1e-12	55.2
WP_001125951.1\|402803_403163_+	hypothetical protein	A0A1B1P7A1	Bacillus_phage	3.7e-32	54.2
WP_000717826.1\|403182_403350_+	DUF3954 domain-containing protein	A0A1B0T6B8	Bacillus_phage	1.4e-13	62.3
WP_000109485.1\|403375_403627_+	hypothetical protein	A0A1B1P7W1	Bacillus_phage	1.2e-16	51.3
WP_001024287.1\|403646_404129_+	nucleoside triphosphate pyrophosphohydrolase family protein	A0A0U4IBD0	Bacillus_phage	2.0e-20	48.6
WP_049800266.1\|405037_405265_+	hypothetical protein	A0A2H4J3B9	uncultured_Caudovirales_phage	5.8e-15	57.1
WP_000060527.1\|405307_405607_+	hypothetical protein	Q3HKX6	Bacillus_phage	9.9e-47	97.0
WP_000275021.1\|405655_405841_+	hypothetical protein	NA	NA	NA	NA
WP_014481556.1\|405861_406056_+	hypothetical protein	B0YL92	Streptococcus_virus	9.4e-06	43.4
WP_000234109.1\|406092_406275_+	hypothetical protein	NA	NA	NA	NA
WP_000937293.1\|406564_406894_+	hypothetical protein	NA	NA	NA	NA
WP_000645582.1\|406911_407034_+	DUF3983 domain-containing protein	NA	NA	NA	NA
WP_000579651.1\|407061_407253_+	hypothetical protein	NA	NA	NA	NA
WP_000166202.1\|407560_408043_+	ArpU family transcriptional regulator	H0USV3	Bacillus_phage	3.4e-73	83.1
WP_001012162.1\|408042_408585_+\|integrase	site-specific integrase	W8CYP1	Bacillus_phage	2.9e-89	92.2
WP_000778981.1\|409321_409540_+	hypothetical protein	D2XR60	Bacillus_phage	3.3e-31	94.4
WP_001014577.1\|409546_409819_+	hypothetical protein	NA	NA	NA	NA
WP_041184167.1\|409814_410150_+	HNH endonuclease	D2XR61	Bacillus_phage	9.4e-54	92.8
WP_000301141.1\|410273_410585_+\|terminase	terminase	D2XR14	Bacillus_phage	1.2e-47	98.1
WP_000621033.1\|410581_412249_+\|terminase	terminase large subunit	D2XR15	Bacillus_phage	3.7e-311	93.3
WP_041184063.1\|412257_413403_+\|portal	phage portal protein	D2XR16	Bacillus_phage	8.5e-179	85.9
WP_014481558.1\|413402_414146_+\|protease	Clp protease ClpP	D2XR17	Bacillus_phage	6.2e-122	91.1
WP_000234876.1\|414149_415304_+\|capsid	phage major capsid protein	A0A2H4JHU0	uncultured_Caudovirales_phage	1.2e-201	91.9
WP_000361979.1\|415309_415603_+	hypothetical protein	A0A2H4JG04	uncultured_Caudovirales_phage	1.6e-41	86.6
WP_001247281.1\|415604_415958_+\|head	phage head closure protein	A0A2H4JGG7	uncultured_Caudovirales_phage	7.9e-59	97.4
WP_014481559.1\|415959_416289_+	HK97 gp10 family phage protein	D2XR21	Bacillus_phage	4.9e-47	87.9
WP_000172096.1\|416288_416618_+	hypothetical protein	D2XR22	Bacillus_phage	1.3e-52	93.6
WP_001114732.1\|416618_417212_+\|tail	phage tail protein	A0A2H4JDV4	uncultured_Caudovirales_phage	1.4e-95	86.7
WP_000415934.1\|417218_417575_+	hypothetical protein	A0A2H4JAG8	uncultured_Caudovirales_phage	2.0e-41	71.7
WP_000918780.1\|417805_421441_+	hypothetical protein	A0A2H4JAI2	uncultured_Caudovirales_phage	2.2e-188	86.1
WP_000094110.1\|421482_422964_+\|tail	phage tail protein	A0A1B1P7W7	Bacillus_phage	1.3e-251	81.9
WP_001260147.1\|422960_426971_+	hypothetical protein	A0A0U3SD62	Bacillus_phage	0.0e+00	81.7
WP_001051333.1\|426993_427443_+	hypothetical protein	A0A2H4J6F8	uncultured_Caudovirales_phage	7.1e-81	98.7
WP_000398745.1\|427537_427774_+	hypothetical protein	A0A2H4J382	uncultured_Caudovirales_phage	1.5e-18	96.2
WP_000253959.1\|427773_428013_+	hypothetical protein	A0A2H4J378	uncultured_Caudovirales_phage	1.0e-33	100.0
WP_000750675.1\|428009_429074_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4JAS1	uncultured_Caudovirales_phage	1.2e-198	95.2
WP_000599666.1\|429341_429587_+	hypothetical protein	NA	NA	NA	NA
WP_000383883.1\|429588_430437_+	AraC family transcriptional regulator	A0A1B0RXG1	Streptococcus_phage	1.6e-20	38.6
WP_000277081.1\|430563_431055_-	hypothetical protein	Q3HL01	Bacillus_phage	1.2e-65	82.2
WP_001237238.1\|431047_431260_-	helix-turn-helix transcriptional regulator	Q2I8E4	Bacillus_phage	2.7e-30	100.0
WP_001267628.1\|431443_431746_+	hypothetical protein	Q2I8E3	Bacillus_phage	9.7e-50	97.0
WP_000170773.1\|431748_431931_+	hypothetical protein	Q2I8E2	Bacillus_phage	2.7e-23	91.7
WP_000891518.1\|432046_433228_+	cell division protein FtsK	H0USY1	Bacillus_phage	7.1e-189	82.7
WP_001025809.1\|433169_433793_+	hypothetical protein	H0USY2	Bacillus_phage	9.5e-100	84.4
WP_000566717.1\|434104_435094_+\|tRNA	tRNA-dihydrouridine synthase	NA	NA	NA	NA
WP_000910759.1\|435610_438391_+	EAL domain-containing protein	NA	NA	NA	NA
WP_000642322.1\|438423_440064_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
WP_000890307.1\|440118_440748_-	hypothetical protein	NA	NA	NA	NA
WP_000426649.1\|441218_442478_+	TIR domain-containing protein	NA	NA	NA	NA
WP_000146519.1\|443917_444934_+	hypothetical protein	NA	NA	NA	NA
444897:444913	attR	NA	NA	NA	NA
WP_103557153.1\|445183_445369_-	hypothetical protein	NA	NA	NA	NA
WP_001251709.1\|445423_445942_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.7e-22	37.7
WP_000233730.1\|446037_446745_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_130983690.1\|446822_447062_+	hypothetical protein	NA	NA	NA	NA
WP_000217525.1\|446946_447642_-	hypothetical protein	NA	NA	NA	NA
WP_000704466.1\|447656_448766_-	dipeptide epimerase	Q6A202	Oenococcus_phage	1.1e-18	25.3
WP_000972829.1\|448858_450130_+	hypothetical protein	NA	NA	NA	NA
WP_000711543.1\|450118_451540_-	Na+/H+ antiporter NhaC	NA	NA	NA	NA
WP_000853515.1\|451833_452949_+	amidohydrolase	NA	NA	NA	NA
WP_001005640.1\|453122_453731_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000501505.1\|453734_454481_+	hypothetical protein	NA	NA	NA	NA
WP_000599492.1\|454521_456048_-	alkyl hydroperoxide reductase subunit F	A0A1W6JNB4	Lactococcus_phage	9.1e-19	30.8
WP_000924422.1\|456062_456626_-	peroxiredoxin	NA	NA	NA	NA
WP_000033262.1\|457214_458444_+	S-methyl-5-thioribose kinase	NA	NA	NA	NA
WP_000392483.1\|458456_459500_+	S-methyl-5-thioribose-1-phosphate isomerase	NA	NA	NA	NA
WP_000926547.1\|459554_460196_+	L-fuculose-phosphate aldolase	NA	NA	NA	NA
WP_000613094.1\|460236_461244_-	iron ABC transporter permease	NA	NA	NA	NA
WP_000823049.1\|461240_462281_-	iron ABC transporter permease	NA	NA	NA	NA
WP_000732578.1\|462329_463247_-	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_142285829.1\|463348_463555_+	hypothetical protein	NA	NA	NA	NA
WP_001078280.1\|463579_464629_+	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.2e-17	28.1
WP_000834377.1\|464872_465187_-	hypothetical protein	NA	NA	NA	NA
WP_000482304.1\|465578_466028_+	DUF1232 domain-containing protein	NA	NA	NA	NA
WP_000235479.1\|466218_466587_-	hypothetical protein	NA	NA	NA	NA
WP_000608412.1\|466936_468055_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	S6AND0	Bacillus_phage	8.9e-173	80.1

DBSCAN-SWA_3

1118968 : 1157384

Bacillus_phage(97.83%)

tail,terminase,portal,integrase,head

attL 1118900:1118921|attR 1157563:1157584

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1118900:1118921	attL	NA	NA	NA	NA
WP_000135928.1\|1118968_1120126_-\|integrase	site-specific integrase	A0A0M5M609	Bacillus_phage	2.2e-222	100.0
WP_000253952.1\|1120203_1120629_-	ImmA/IrrE family metallo-endopeptidase	A0A0M4RD70	Bacillus_phage	2.4e-78	100.0
WP_000206355.1\|1120644_1121067_-	helix-turn-helix transcriptional regulator	A0A0M4QX29	Bacillus_phage	4.8e-71	100.0
WP_000432047.1\|1121340_1121526_+	transcriptional regulator	A0A0M3ULF9	Bacillus_phage	7.0e-27	100.0
WP_000741687.1\|1121525_1121798_+	DUF771 domain-containing protein	A0A0M3ULF5	Bacillus_phage	7.7e-46	100.0
WP_000132029.1\|1121811_1122648_+	hypothetical protein	A0A0M5M1L9	Bacillus_phage	1.4e-151	100.0
WP_001030777.1\|1122678_1122969_+	hypothetical protein	A0A0M4R5H4	Bacillus_phage	5.1e-48	100.0
WP_000128055.1\|1122961_1123234_-	hypothetical protein	M9Q2L4	Clostridium_phage	3.5e-22	56.8
WP_000394585.1\|1123691_1123916_-	hypothetical protein	A0A0M4QX50	Bacillus_phage	1.3e-35	100.0
WP_001140299.1\|1124298_1124523_+	hypothetical protein	A0A0M4S677	Bacillus_phage	2.1e-33	98.6
WP_001082031.1\|1124947_1125637_+	ERF family protein	A0A0M3ULL1	Bacillus_phage	3.5e-111	100.0
WP_001103731.1\|1125636_1125816_+	hypothetical protein	A0A0M4R389	Bacillus_phage	4.4e-26	100.0
WP_000849735.1\|1125812_1126082_+	hypothetical protein	A0A0M4S680	Bacillus_phage	1.3e-45	100.0
WP_103557158.1\|1126740_1127670_+	DNA replication protein	A0A0M4RD64	Bacillus_phage	3.7e-132	100.0
WP_000654817.1\|1127712_1127895_+	hypothetical protein	A0A0M4RD83	Bacillus_phage	3.4e-26	100.0
WP_001214029.1\|1128674_1129139_+	hypothetical protein	A0A0M3ULE9	Bacillus_phage	1.3e-90	100.0
WP_000841930.1\|1129175_1129688_+	hypothetical protein	A0A0M4R373	Bacillus_phage	3.4e-95	100.0
WP_000980003.1\|1129761_1129941_+	hypothetical protein	A0A0M5M1S4	Bacillus_phage	1.4e-27	100.0
WP_041184080.1\|1130056_1130263_-	hypothetical protein	Q3HKS8	Bacillus_phage	6.7e-26	91.0
WP_000065133.1\|1130326_1130833_+	hypothetical protein	A0A0M4RU27	Bacillus_phage	1.5e-95	100.0
WP_000060544.1\|1131180_1131480_+	hypothetical protein	A0A0M4REQ3	Bacillus_phage	3.3e-50	100.0
WP_000254430.1\|1132516_1132843_+	hypothetical protein	A0A0M5M1L2	Bacillus_phage	4.0e-57	100.0
WP_000884300.1\|1132869_1133253_+	ArpU family transcriptional regulator	A0A0M4R397	Bacillus_phage	1.1e-66	100.0
WP_000687862.1\|1133313_1133646_+	hypothetical protein	A0A0M3ULL9	Bacillus_phage	4.6e-53	100.0
WP_000779244.1\|1134348_1134789_+\|terminase	terminase small subunit	A0A0M4RU19	Bacillus_phage	3.6e-77	100.0
WP_041184176.1\|1134781_1136080_+\|terminase	PBSX family phage terminase large subunit	A0A0M4R5F3	Bacillus_phage	5.0e-260	100.0
WP_000122855.1\|1136091_1136283_+	hypothetical protein	A0A0M4R5E6	Bacillus_phage	5.0e-28	100.0
WP_000888995.1\|1136308_1137652_+\|portal	phage portal protein	A0A0M4S669	Bacillus_phage	4.1e-257	100.0
WP_000207427.1\|1137638_1138664_+\|head	head morphogenesis protein	A0A0M5M7Z2	Bacillus_phage	1.0e-183	99.4
WP_000445856.1\|1138909_1139104_+	hypothetical protein	A0A0M4QX57	Bacillus_phage	9.0e-25	100.0
WP_000777389.1\|1139090_1139327_+	hypothetical protein	A0A0M5M1L7	Bacillus_phage	4.8e-36	100.0
WP_080559637.1\|1139375_1140161_-	DUF4393 domain-containing protein	A0A0M4RU42	Bacillus_phage	2.0e-102	99.5
WP_000846754.1\|1140466_1141042_+	DUF4355 domain-containing protein	A0A0M3ULE7	Bacillus_phage	1.2e-56	100.0
WP_001121184.1\|1141054_1141876_+	hypothetical protein	A0A0M5M1L4	Bacillus_phage	8.3e-152	100.0
WP_000633425.1\|1141912_1142251_+	hypothetical protein	NA	NA	NA	NA
WP_001257746.1\|1142232_1142586_+	hypothetical protein	A0A0M4S6Z9	Bacillus_phage	7.9e-59	100.0
WP_000010071.1\|1142575_1142992_+	hypothetical protein	A0A0M4S6Z2	Bacillus_phage	2.5e-72	100.0
WP_000566227.1\|1142988_1143369_+	hypothetical protein	A0A0M4RD75	Bacillus_phage	8.4e-67	100.0
WP_000741680.1\|1143389_1144022_+	hypothetical protein	A0A0M4R5F9	Bacillus_phage	1.0e-96	99.4
WP_001018902.1\|1144085_1144478_+	hypothetical protein	A0A0M4QX42	Bacillus_phage	4.8e-65	100.0
WP_041184081.1\|1144513_1144774_+	hypothetical protein	A0A0M4S6X7	Bacillus_phage	8.4e-42	100.0
WP_000128191.1\|1148041_1149556_+\|tail	phage tail protein	A0A0M5M1L8	Bacillus_phage	1.2e-302	100.0
WP_001181676.1\|1149559_1154215_+	hypothetical protein	A0A0M4RER0	Bacillus_phage	0.0e+00	100.0
WP_001027046.1\|1154232_1154697_+	hypothetical protein	A0A0M4R5G6	Bacillus_phage	1.5e-81	100.0
WP_000868797.1\|1156037_1156604_+	GNAT family N-acetyltransferase	A0A0M3ULL7	Bacillus_phage	2.9e-103	100.0
WP_000650688.1\|1156708_1157005_-	hypothetical protein	A0A0M4R382	Bacillus_phage	4.4e-47	100.0
WP_000018833.1\|1157165_1157384_+	hypothetical protein	A0A1C8E991	Bacillus_phage	8.6e-16	62.5
1157563:1157584	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2007625 : 2018827

Bacillus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000755517.1\|2007625_2008906_+	NlpC/P60 family protein	A0A1V0DZX6	Clostridioides_phage	4.5e-11	31.5
WP_001194311.1\|2009003_2009768_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000453860.1\|2010007_2011768_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.6e-269	96.3
WP_000937022.1\|2011856_2012534_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.5e-119	94.2
WP_041184204.1\|2012548_2013601_+	sensor histidine kinase	W8CYF6	Bacillus_phage	6.8e-167	88.5
WP_000398541.1\|2013718_2015131_-	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	7.9e-09	25.6
WP_000793097.1\|2015131_2015845_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.2e-36	39.5
WP_000722263.1\|2016043_2016394_-	YxeA family protein	NA	NA	NA	NA
WP_000830527.1\|2016416_2017148_-	multidrug ABC transporter permease	NA	NA	NA	NA
WP_000590584.1\|2017160_2017913_-	ABC transporter permease	NA	NA	NA	NA
WP_000116407.1\|2017909_2018827_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-43	44.5

DBSCAN-SWA_5

2725377 : 2732616

Geobacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000124898.1\|2725377_2726571_-	glycosyl transferase family 1	Q0IKX4	Leucania_separata_nucleopolyhedrovirus	5.3e-06	26.2
WP_000373590.1\|2726626_2727304_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BUR2	Microcystis_phage	5.8e-34	41.0
WP_000720549.1\|2727336_2727855_-	DNA topology modulation protein	A0A097BYE2	Leuconostoc_phage	1.4e-43	47.9
WP_001204722.1\|2727851_2728781_-	phosphotransferase	NA	NA	NA	NA
WP_001093436.1\|2728806_2729193_-	DUF2809 domain-containing protein	NA	NA	NA	NA
WP_000655487.1\|2729258_2729966_-	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	5.1e-17	26.2
WP_000648514.1\|2729987_2730341_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_000288942.1\|2730354_2730762_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000714652.1\|2731015_2732401_+	MBL fold metallo-hydrolase	Q0H255	Geobacillus_phage	1.0e-77	59.9
WP_000820164.1\|2732403_2732616_+	DUF3006 domain-containing protein	Q0H256	Geobacillus_phage	1.9e-12	54.4

DBSCAN-SWA_6

4245213 : 4311213

Klosneuvirus(20.0%)

tRNA,coat,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000690779.1\|4245213_4248096_-\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA
WP_000025313.1\|4248321_4249428_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_001092219.1\|4249458_4250292_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_001138512.1\|4250311_4251841_-	L-aspartate oxidase	NA	NA	NA	NA
WP_000973786.1\|4251993_4253136_+	aminotransferase class V-fold PLP-dependent enzyme	A0A1X7QGF3	Faustovirus	7.7e-31	29.2
WP_000812272.1\|4253135_4253678_+	transcription repressor NadR	NA	NA	NA	NA
WP_000510690.1\|4253763_4254411_+	MOSC domain-containing protein	NA	NA	NA	NA
WP_000621702.1\|4254474_4255326_-	prephenate dehydratase	NA	NA	NA	NA
WP_001026326.1\|4255423_4257337_-	ABC transporter permease	NA	NA	NA	NA
WP_001011375.1\|4257386_4259309_-	ABC transporter permease	NA	NA	NA	NA
WP_000114530.1\|4259283_4260060_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.6e-19	31.0
WP_000864966.1\|4260153_4261236_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_000276721.1\|4261225_4261933_-	response regulator transcription factor	NA	NA	NA	NA
WP_000497125.1\|4262072_4263359_-	GTPase ObgE	NA	NA	NA	NA
WP_001037006.1\|4263358_4263907_-	sporulation protein	NA	NA	NA	NA
WP_000270908.1\|4264620_4264929_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_000855420.1\|4265098_4266487_-	Rne/Rng family ribonuclease	NA	NA	NA	NA
WP_000599051.1\|4266554_4267415_-	stage IV sporulation protein SpoIVFB	NA	NA	NA	NA
WP_000797468.1\|4267407_4268154_-	stage IV sporulation protein SpoIVFA	NA	NA	NA	NA
WP_000503311.1\|4268287_4269085_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_000391517.1\|4269087_4269774_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_000975746.1\|4269809_4270355_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_001135481.1\|4270369_4271221_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_000466737.1\|4271262_4272282_-	rod shape-determining protein MreB	NA	NA	NA	NA
WP_001013383.1\|4272439_4273117_-	DNA repair protein RadC	NA	NA	NA	NA
WP_000720488.1\|4273163_4273739_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_000360981.1\|4273960_4274923_-	hypothetical protein	NA	NA	NA	NA
WP_000582083.1\|4275084_4276389_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_000072255.1\|4276482_4279128_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.0e-163	42.6
WP_000367002.1\|4279521_4280547_-\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_000179737.1\|4280609_4281587_-	stage VI sporulation protein D	NA	NA	NA	NA
WP_000712926.1\|4281695_4282985_-	glutamate-1-semialdehyde 2,1-aminomutase	A0A1V0SKB7	Klosneuvirus	1.7e-05	34.1
WP_001087057.1\|4282984_4283974_-	porphobilinogen synthase	NA	NA	NA	NA
WP_000992367.1\|4283994_4284747_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_001226412.1\|4284749_4285679_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_000008996.1\|4285694_4286528_-	cytochrome c assembly protein	NA	NA	NA	NA
WP_000547873.1\|4286545_4287880_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_000133919.1\|4288296_4288752_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_001236357.1\|4288854_4290114_-\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	1.7e-84	48.7
WP_000359782.1\|4290481_4290898_+	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_000869113.1\|4290930_4291527_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
WP_000097297.1\|4291523_4293854_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.7e-178	43.8
WP_014481760.1\|4294036_4295707_-\|protease	ATP-dependent protease LonB	E3T4F6	Cafeteria_roenbergensis_virus	7.4e-14	33.0
WP_000472282.1\|4295813_4297073_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.3e-148	66.1
WP_000729258.1\|4297337_4298615_-	trigger factor	NA	NA	NA	NA
WP_000358267.1\|4298924_4299923_-	hypothetical protein	NA	NA	NA	NA
WP_001983650.1\|4300120_4300369_-	hypothetical protein	NA	NA	NA	NA
WP_000937860.1\|4300564_4300747_+	hypothetical protein	NA	NA	NA	NA
WP_000124461.1\|4300840_4301041_-	hypothetical protein	NA	NA	NA	NA
WP_000645509.1\|4302132_4302636_-	metallophosphoesterase	NA	NA	NA	NA
WP_000815935.1\|4302649_4303258_-	XTP/dITP diphosphatase	A0A0P0A2M4	Ugandan_cassava_brown_streak_virus	2.0e-14	34.4
WP_001261765.1\|4303269_4304007_-	ribonuclease PH	NA	NA	NA	NA
WP_001126737.1\|4304135_4305185_-	spore germination protein GerM	NA	NA	NA	NA
WP_000773996.1\|4305316_4306126_-	glutamate racemase	NA	NA	NA	NA
WP_000513870.1\|4306337_4307663_-	MFS transporter	NA	NA	NA	NA
WP_000728512.1\|4308023_4308707_+	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA
WP_001233020.1\|4308756_4309395_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000101450.1\|4309857_4311213_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWW3	Bacteriophage	5.9e-46	32.6

DBSCAN-SWA_7

4698669 : 4789667

102

Bacillus_phage(64.81%)

tRNA,tail,terminase,protease,transposase,portal,holin,integrase,coat,head,capsid

attL 4693246:4693269|attR 4780777:4780800

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4693246:4693269	attL	NA	NA	NA	NA
WP_000287154.1\|4698669_4700046_+\|tRNA	glycine--tRNA ligase	A0A1V0SIF1	Klosneuvirus	3.4e-49	28.1
WP_001140611.1\|4700086_4700470_-	hotdog fold thioesterase	NA	NA	NA	NA
WP_000810315.1\|4700565_4701309_+	DUF3298 and DUF4163 domain-containing protein	NA	NA	NA	NA
WP_001252165.1\|4701359_4701953_+	biotin transporter BioY	NA	NA	NA	NA
WP_041184259.1\|4701994_4702882_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	2.2e-78	52.4
WP_001104182.1\|4702989_4704714_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	5.7e-179	54.0
WP_001158738.1\|4704857_4705463_+	hypothetical protein	NA	NA	NA	NA
WP_000469183.1\|4705544_4707029_-	cytosol aminopeptidase	Q6GYZ8	Mycoplasma_phage	8.7e-59	37.2
WP_014481775.1\|4707155_4707782_-	hypothetical protein	A0A0H3UZG2	Geobacillus_virus	7.3e-15	44.9
WP_000027014.1\|4707868_4708186_-	hypothetical protein	NA	NA	NA	NA
WP_000415311.1\|4708182_4708689_-	NUDIX hydrolase	NA	NA	NA	NA
WP_014481776.1\|4708812_4710021_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000829779.1\|4710483_4711473_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	3.0e-31	52.4
WP_000749093.1\|4711591_4722295_-	DUF11 domain-containing protein	NA	NA	NA	NA
WP_000662576.1\|4722740_4723217_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_000391922.1\|4723548_4724796_+	MFS transporter	NA	NA	NA	NA
WP_000535268.1\|4724806_4725694_-	decarboxylase	NA	NA	NA	NA
WP_000635472.1\|4725773_4726235_+	DUF523 domain-containing protein	NA	NA	NA	NA
WP_000710530.1\|4726557_4727385_+	hypothetical protein	A0A2H4J6G7	uncultured_Caudovirales_phage	1.8e-101	69.5
WP_000551103.1\|4727394_4728015_-	hypothetical protein	H0USY2	Bacillus_phage	6.5e-109	93.2
WP_000891535.1\|4727956_4729138_-	cell division protein FtsK	H0USY1	Bacillus_phage	9.0e-216	94.4
WP_000170777.1\|4729253_4729436_-	hypothetical protein	Q2I8E2	Bacillus_phage	1.4e-22	90.0
WP_001257569.1\|4729432_4729750_-	hypothetical protein	H0USY0	Bacillus_phage	6.4e-52	98.1
WP_000649833.1\|4729932_4730130_+	helix-turn-helix transcriptional regulator	A0A288WG80	Bacillus_phage	3.4e-19	76.2
WP_001137905.1\|4730133_4730313_+	hypothetical protein	NA	NA	NA	NA
WP_000043398.1\|4730318_4730897_+	hypothetical protein	H0USX9	Bacillus_phage	2.2e-95	88.5
WP_000119482.1\|4730950_4731289_+	hypothetical protein	A0A1B1P7R0	Bacillus_phage	2.7e-48	93.8
WP_000542505.1\|4731679_4732498_-	N-acetylmuramoyl-L-alanine amidase	D2XR33	Bacillus_phage	4.7e-147	88.6
WP_000439565.1\|4732497_4732923_-\|holin	phage holin family protein	A0A1B1P787	Bacillus_phage	9.1e-70	96.5
WP_001243322.1\|4732972_4734241_-	DUF2479 domain-containing protein	A0A1B0T696	Bacillus_phage	3.5e-218	91.5
WP_000631946.1\|4734255_4736598_-	endopeptidase	A0A1B0T695	Bacillus_phage	0.0e+00	96.2
WP_000884120.1\|4736594_4737278_-	hypothetical protein	A0A1B0T6A0	Bacillus_phage	1.3e-126	96.5
WP_001119326.1\|4737278_4740803_-\|tail	phage tail tape measure protein	A0A1B0T698	Bacillus_phage	0.0e+00	92.8
WP_000789911.1\|4740819_4741050_-	hypothetical protein	A0A1C8E979	Bacillus_phage	1.7e-30	96.8
WP_000113340.1\|4741046_4741433_-	hypothetical protein	A0A1C8E984	Bacillus_phage	3.6e-65	99.2
WP_000215488.1\|4741444_4742080_-	hypothetical protein	A0A1C8E980	Bacillus_phage	6.3e-115	98.1
WP_000157915.1\|4742091_4742469_-	hypothetical protein	A0A1B1P7P3	Bacillus_phage	8.7e-64	98.4
WP_001167234.1\|4742468_4742798_-	hypothetical protein	A0A1C8E981	Bacillus_phage	7.6e-56	96.3
WP_000824249.1\|4742787_4743117_-	hypothetical protein	A0A1C8E986	Bacillus_phage	1.6e-53	97.2
WP_000342230.1\|4743097_4743358_-	hypothetical protein	A0A1B1P7M9	Bacillus_phage	9.3e-41	97.7
WP_001041462.1\|4743359_4744727_-\|capsid	phage major capsid protein	A0A1B2APY9	Phage_Wrath	2.7e-147	71.7
WP_001140504.1\|4744727_4745306_-\|head,protease	HK97 family phage prohead protease	A0A2H4J6Z9	uncultured_Caudovirales_phage	8.0e-85	80.2
WP_000524251.1\|4745274_4746480_-\|portal	phage portal protein	A0A1B2APW5	Phage_Wrath	4.0e-211	91.5
WP_000587520.1\|4746495_4748220_-\|terminase	terminase large subunit	A0A1B0T685	Bacillus_phage	0.0e+00	93.0
WP_000113450.1\|4748216_4748642_-\|terminase	P27 family phage terminase small subunit	A0A1C8E969	Bacillus_phage	8.3e-71	96.5
WP_000872562.1\|4748724_4749117_-	HNH endonuclease	A0A1B1P7N1	Bacillus_phage	2.4e-64	87.7
WP_000627439.1\|4749113_4749428_-	hypothetical protein	A0A1B0T6C6	Bacillus_phage	5.2e-46	89.4
WP_000074276.1\|4749424_4749643_-	hypothetical protein	NA	NA	NA	NA
WP_000052394.1\|4749689_4749887_-	hypothetical protein	A0A1C8E9B9	Bacillus_phage	2.7e-24	86.2
WP_000930966.1\|4749944_4750169_-	hypothetical protein	H0USV5	Bacillus_phage	6.1e-33	93.2
WP_000895342.1\|4750453_4750843_-	hypothetical protein	A0A1C8E9D1	Bacillus_phage	2.9e-38	60.5
WP_001284975.1\|4750860_4750983_-	DUF3983 domain-containing protein	NA	NA	NA	NA
WP_000847112.1\|4751126_4751312_-	hypothetical protein	Q3HKX5	Bacillus_phage	5.1e-09	51.6
WP_000826294.1\|4751347_4751557_-	hypothetical protein	NA	NA	NA	NA
WP_000159774.1\|4751773_4752520_-	sigma-70 family RNA polymerase sigma factor	A0A288WFZ8	Bacillus_phage	6.5e-95	72.2
WP_000002744.1\|4752516_4752741_-	hypothetical protein	C7DTL1	Bacillus_phage	2.3e-24	74.0
WP_000532220.1\|4752740_4753622_-	DNA replication protein	A0A0S2SXI8	Bacillus_phage	5.2e-27	33.6
WP_000040039.1\|4753633_4754407_-	hypothetical protein	A0A1W6JNI1	Staphylococcus_phage	1.4e-52	46.6
WP_000425248.1\|4754540_4755422_-	hypothetical protein	NA	NA	NA	NA
WP_000372559.1\|4755445_4756117_-	Rha family transcriptional regulator	A0A288WFT2	Bacillus_phage	9.6e-82	65.6
WP_000277641.1\|4756326_4756515_-	helix-turn-helix domain-containing protein	A0A1B2APY7	Phage_Wrath	5.9e-21	80.6
WP_000379206.1\|4756659_4756905_-	hypothetical protein	NA	NA	NA	NA
WP_000004989.1\|4757152_4757482_+	helix-turn-helix transcriptional regulator	H0UST7	Bacillus_phage	9.6e-51	96.3
WP_080559766.1\|4757884_4759051_-	hypothetical protein	NA	NA	NA	NA
WP_000896931.1\|4759182_4759413_-	hypothetical protein	H0UST5	Bacillus_phage	8.5e-30	90.8
WP_000237487.1\|4760375_4761437_+\|integrase	site-specific integrase	A0A1B2AQ00	Phage_Wrath	3.5e-171	83.9
WP_000833158.1\|4761524_4761878_-	YxeA family protein	A0A0K2CYS5	Paenibacillus_phage	3.8e-13	38.7
WP_000573827.1\|4762105_4762459_-	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	1.3e-16	44.2
WP_000077379.1\|4762500_4763367_-	diaminopimelate epimerase	NA	NA	NA	NA
WP_000595026.1\|4763611_4763851_-	YuzB family protein	NA	NA	NA	NA
WP_000682081.1\|4764202_4765273_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_001103328.1\|4765503_4765677_+	aspartyl-phosphate phosphatase Spo0E family protein	NA	NA	NA	NA
WP_000470284.1\|4765731_4766391_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-22	34.0
WP_000679263.1\|4766374_4767172_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_000212737.1\|4767270_4767612_-	alkylphosphonate utilization operon protein PhnA	NA	NA	NA	NA
WP_000101446.1\|4767963_4769319_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWW3	Bacteriophage	7.7e-46	32.7
WP_142285831.1\|4769750_4770548_-	DUF2628 domain-containing protein	NA	NA	NA	NA
WP_000714503.1\|4770846_4772505_-	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_002028779.1\|4772591_4773062_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_041184260.1\|4773048_4773687_+	DUF4304 domain-containing protein	NA	NA	NA	NA
WP_001046063.1\|4773736_4774405_-	hypothetical protein	NA	NA	NA	NA
WP_000379274.1\|4774518_4775196_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_014481777.1\|4775294_4776089_-	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_000248594.1\|4776140_4776449_-	YuzD family protein	NA	NA	NA	NA
WP_000431159.1\|4776655_4776892_+	NifU family protein	Q58MC7	Prochlorococcus_phage	2.0e-10	46.6
WP_001137787.1\|4777086_4777302_+	hypothetical protein	NA	NA	NA	NA
WP_000581272.1\|4777363_4778365_-\|coat	spore coat protein CotS	NA	NA	NA	NA
WP_000665103.1\|4778485_4778977_+	phosphatidylglycerophosphatase A	G3MBC5	Bacillus_virus	3.5e-41	53.8
WP_000351159.1\|4779000_4779480_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000683455.1\|4780090_4780672_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_000276467.1\|4780895_4781660_-	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
4780777:4780800	attR	NA	NA	NA	NA
WP_000503352.1\|4781769_4782402_-	transcriptional regulator	NA	NA	NA	NA
WP_000274015.1\|4782473_4782914_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_000439090.1\|4783061_4784033_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_000392606.1\|4784050_4784317_+	DUF3055 domain-containing protein	NA	NA	NA	NA
WP_041184153.1\|4784345_4784558_+	hypothetical protein	NA	NA	NA	NA
WP_000469431.1\|4784707_4786264_+\|transposase	IS1182 family transposase	Q9MBP7	Staphylococcus_prophage	1.0e-81	35.5
WP_001174578.1\|4786466_4786964_+	hypothetical protein	NA	NA	NA	NA
WP_000435941.1\|4787000_4787303_-	YutD family protein	NA	NA	NA	NA
WP_000744209.1\|4787421_4787997_+	hypothetical protein	NA	NA	NA	NA
WP_001241004.1\|4788034_4788766_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002163480.1\|4788851_4789667_+\|protease	YhfC family intramembrane metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_017201

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 56995

Streptococcus_phage(27.27%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001123513.1\|1080_1386_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000648301.1\|1509_1791_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	2.0e-09	57.4
WP_000448512.1\|1812_2046_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_000283268.1\|2297_2495_+	hypothetical protein	NA	NA	NA	NA
WP_000118548.1\|2621_3215_-	cell division protein FtsN	NA	NA	NA	NA
WP_000448095.1\|3505_3838_-	hypothetical protein	NA	NA	NA	NA
WP_001011748.1\|7828_8344_+	hypothetical protein	NA	NA	NA	NA
WP_000156170.1\|8464_9196_+	hypothetical protein	NA	NA	NA	NA
WP_142392476.1\|13086_13986_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.0e-23	27.6
WP_014481811.1\|14078_14342_+	hypothetical protein	NA	NA	NA	NA
WP_000075684.1\|14669_15134_+	hypothetical protein	NA	NA	NA	NA
WP_001053961.1\|15327_16764_+\|transposase	IS4-like element IS231D family transposase	NA	NA	NA	NA
WP_080559829.1\|16907_17213_+	hypothetical protein	NA	NA	NA	NA
WP_142285818.1\|17466_18765_+	pesticidial crystal protein cry4BA	NA	NA	NA	NA
WP_000425850.1\|18884_20705_-	hypothetical protein	NA	NA	NA	NA
WP_000540304.1\|21444_22131_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	6.6e-70	57.8
WP_080559835.1\|22207_22531_+	hypothetical protein	NA	NA	NA	NA
WP_000959240.1\|22708_22930_-	aspartyl-phosphate phosphatase Spo0E family protein	NA	NA	NA	NA
WP_001267178.1\|23112_23367_-	hypothetical protein	NA	NA	NA	NA
WP_001136649.1\|23568_24648_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1P8DJG9	Virus_Rctr71	1.4e-18	39.1
WP_014481814.1\|24653_25055_-\|transposase	IS200/IS605 family transposase	Q332K6	Clostridium_botulinum_C_phage	1.8e-51	72.0
WP_000007313.1\|25187_25400_-	hypothetical protein	NA	NA	NA	NA
WP_000613337.1\|25451_26051_-	hypothetical protein	NA	NA	NA	NA
WP_041184281.1\|26666_27182_+	hypothetical protein	NA	NA	NA	NA
WP_000462739.1\|27183_27657_+	hypothetical protein	NA	NA	NA	NA
WP_000959160.1\|27757_28114_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	1.5e-28	56.8
WP_000146616.1\|28158_28689_+	hypothetical protein	NA	NA	NA	NA
WP_000933614.1\|28833_29094_+	hypothetical protein	NA	NA	NA	NA
WP_000024603.1\|29217_29628_+	hypothetical protein	NA	NA	NA	NA
WP_000702366.1\|29624_29945_+	hypothetical protein	NA	NA	NA	NA
WP_049800274.1\|30113_30599_-	hypothetical protein	NA	NA	NA	NA
WP_014481815.1\|30690_31212_-	hypothetical protein	NA	NA	NA	NA
WP_000865080.1\|31293_31776_-	hypothetical protein	NA	NA	NA	NA
WP_000713434.1\|32107_32491_-	hypothetical protein	NA	NA	NA	NA
WP_080559830.1\|32642_32825_-	hypothetical protein	NA	NA	NA	NA
WP_000540344.1\|32817_33057_-	hypothetical protein	NA	NA	NA	NA
WP_000873731.1\|33347_33593_-	helix-turn-helix domain-containing protein	A0A2H4JBQ8	uncultured_Caudovirales_phage	4.2e-11	44.6
WP_000087398.1\|34688_34883_-	hypothetical protein	NA	NA	NA	NA
WP_000961794.1\|34976_35318_-	DUF4257 domain-containing protein	NA	NA	NA	NA
WP_001103070.1\|35624_36113_-	hypothetical protein	NA	NA	NA	NA
WP_041184283.1\|36143_36416_-	hypothetical protein	NA	NA	NA	NA
WP_000251917.1\|36920_37892_+	hypothetical protein	NA	NA	NA	NA
WP_000615509.1\|38272_39127_-	hypothetical protein	NA	NA	NA	NA
WP_000528971.1\|39989_40697_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	5.3e-38	42.9
WP_001084998.1\|41249_41933_+	hypothetical protein	NA	NA	NA	NA
WP_103557188.1\|44456_45734_+	pesticidial crystal protein cry4BA	NA	NA	NA	NA
WP_000528971.1\|49954_50662_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	5.3e-38	42.9
WP_000397533.1\|50807_51284_-	hypothetical protein	NA	NA	NA	NA
WP_000287580.1\|51544_53704_-	ATP-dependent helicase	A0A068EQC7	Bacillus_phage	6.5e-79	33.1
WP_002042246.1\|53807_55091_-	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_041184274.1\|55369_56995_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	2.0e-48	36.2

DBSCAN-SWA_2

60400 : 64436

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000465312.1\|60400_62692_-	DNA translocase FtsK	A0A0A0RUH6	Bacillus_phage	2.4e-84	30.8
WP_002042241.1\|62712_63795_-	hypothetical protein	L0LAE4	Bacillus_phage	6.0e-41	34.6
WP_000889471.1\|63809_64436_-	hypothetical protein	A0A076GD93	Bacillus_phage	1.1e-07	28.8

DBSCAN-SWA_3

99272 : 100484

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001271977.1\|99272_100484_-	lytic transglycosylase	A0A1S5SEZ8	Streptococcus_phage	1.3e-63	43.2

DBSCAN-SWA_4

103985 : 106526

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001077387.1\|103985_106526_-	DUF87 domain-containing protein	A0A1S5SF64	Streptococcus_phage	3.1e-141	36.6

DBSCAN-SWA_5

123868 : 125167

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000991108.1\|123868_125167_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	7.9e-40	31.8

DBSCAN-SWA_6

128635 : 171025

Bacillus_phage(58.33%)

transposase,integrase,protease

attL 157176:157198|attR 177747:177761

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000824161.1\|128635_129070_+	sporulation protein	F8WPS9	Bacillus_phage	1.1e-33	51.8
WP_000397989.1\|129107_129755_+	hypothetical protein	NA	NA	NA	NA
WP_000179055.1\|130080_131682_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000849064.1\|131791_132466_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000550858.1\|132517_132865_-	hypothetical protein	NA	NA	NA	NA
WP_140157814.1\|133836_134769_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_000323592.1\|134833_135403_-	hypothetical protein	NA	NA	NA	NA
WP_103557187.1\|135392_136283_-	hypothetical protein	NA	NA	NA	NA
WP_001084248.1\|136360_136630_-	hypothetical protein	A0A1J0MFM9	Staphylococcus_phage	1.7e-13	49.4
WP_000721102.1\|136959_137775_+	hypothetical protein	NA	NA	NA	NA
WP_041184293.1\|139126_139702_+	recombinase family protein	A0A0A8WIK3	Clostridium_phage	5.8e-43	51.4
WP_001227387.1\|139748_140423_+	hypothetical protein	A0A0S2MVD6	Bacillus_phage	4.5e-63	54.8
WP_000480927.1\|140471_140873_+	hypothetical protein	NA	NA	NA	NA
WP_000870874.1\|141572_141809_-	helix-turn-helix transcriptional regulator	A0A0S2MVM0	Bacillus_phage	6.5e-25	73.7
WP_014481828.1\|141957_142290_+	hypothetical protein	O48480	Bacillus_phage	2.3e-07	44.7
WP_001140313.1\|142418_142772_+	hypothetical protein	W8EK86	Geobacillus_phage	1.6e-35	63.2
WP_000668758.1\|142785_143139_+	hypothetical protein	I1TLH2	Bacillus_phage	1.5e-30	60.3
WP_000343751.1\|143140_145684_+	hypothetical protein	W8EEX6	Geobacillus_phage	5.3e-298	60.2
WP_000658308.1\|145969_146227_+	hypothetical protein	NA	NA	NA	NA
WP_041184294.1\|146317_146557_+	hypothetical protein	NA	NA	NA	NA
WP_041184295.1\|146591_147095_+	hypothetical protein	NA	NA	NA	NA
WP_000627840.1\|148261_149644_+	MmcB family DNA repair protein	NA	NA	NA	NA
WP_000925010.1\|152262_152514_+	hypothetical protein	NA	NA	NA	NA
WP_000671232.1\|153646_154603_-	hypothetical protein	NA	NA	NA	NA
WP_000410109.1\|155665_156373_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	5.3e-46	45.5
WP_000079466.1\|156441_157077_-	GntR family transcriptional regulator	NA	NA	NA	NA
157176:157198	attL	NA	NA	NA	NA
WP_080559833.1\|157697_158102_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
157176:157198	attL	NA	NA	NA	NA
WP_000189805.1\|158745_159741_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000360928.1\|160143_161316_+\|integrase	site-specific integrase	A0A0E3T6D9	Bacillus_phage	2.7e-07	23.2
WP_000357586.1\|161843_165230_+	hypothetical protein	NA	NA	NA	NA
161527:161549	attR	NA	NA	NA	NA
WP_000813293.1\|167221_170173_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
161527:161549	attR	NA	NA	NA	NA
WP_000747907.1\|170182_171025_-\|integrase	tyrosine-type recombinase/integrase	A0A1B1P7C7	Bacillus_phage	8.2e-38	32.4
177747:177761	attR	NA	NA	NA	NA

DBSCAN-SWA_7

178441 : 180205

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001214612.1\|178441_180205_-	sulfate permease	A0A2H4J153	uncultured_Caudovirales_phage	2.7e-38	25.3

DBSCAN-SWA_8

183266 : 186964

Aeromonas_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000668448.1\|183266_183809_+	recombinase family protein	A0A219Y9V9	Aeromonas_phage	2.8e-31	43.9
WP_001093350.1\|183889_186964_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	2.3e-45	22.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NC_017199

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

61466 : 69992

Bacillus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041184305.1\|61466_61721_+	hypothetical protein	I7ILU4	Staphylococcus_phage	8.5e-23	61.7
WP_000425549.1\|61889_62144_+	hypothetical protein	NA	NA	NA	NA
WP_001140301.1\|62177_62717_+	hypothetical protein	A0A1I9S5V4	Bacillus_phage	5.9e-74	78.5
WP_001288244.1\|62760_62976_+	hypothetical protein	A0A0A7AQI6	Bacillus_phage	8.5e-24	77.5
WP_001092155.1\|63605_63833_+	hypothetical protein	NA	NA	NA	NA
WP_000391263.1\|63973_64423_+	hypothetical protein	A0A0A7AQW7	Bacillus_phage	4.1e-52	67.3
WP_000729150.1\|64648_65020_+	hypothetical protein	NA	NA	NA	NA
WP_014481524.1\|65646_66519_+	DNA cytosine methyltransferase	A0A141E1L1	Streptococcus_phage	1.2e-89	58.8
WP_014481525.1\|66478_66838_+	DNA methyltransferase	A0A1S5SFL7	Streptococcus_phage	9.8e-33	62.0
WP_000533756.1\|66957_67848_+	hypothetical protein	NA	NA	NA	NA
WP_103557176.1\|68408_68672_+	hypothetical protein	NA	NA	NA	NA
WP_000991108.1\|68693_69992_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	7.9e-40	31.8

DBSCAN-SWA_2

88186 : 104007

Streptococcus_phage(33.33%)

integrase,transposase

attL 102235:102294|attR 105312:105505

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000528971.1\|88186_88894_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	5.3e-38	42.9
WP_000583546.1\|89254_89818_+	recombinase family protein	A0A219Y9V9	Aeromonas_phage	7.7e-32	41.2
WP_000254350.1\|89899_92113_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_001106361.1\|92172_93063_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJP1	Virus_Rctr41k	3.1e-19	29.4
WP_103557191.1\|95882_96797_+	hypothetical protein	NA	NA	NA	NA
WP_000982046.1\|96913_97705_+	hypothetical protein	NA	NA	NA	NA
WP_000394382.1\|98069_99512_+	spore germination protein	NA	NA	NA	NA
WP_001081194.1\|99504_100608_+	GerAB/ArcD/ProY family transporter	NA	NA	NA	NA
WP_000623948.1\|100604_101735_+	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_001268479.1\|101833_102475_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	3.2e-66	58.9
102235:102294	attL	NA	NA	NA	NA
WP_087963586.1\|103308_103521_-\|transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	4.9e-08	44.6
WP_014481534.1\|103524_104007_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5P429	Shigella_phage	2.1e-06	28.8
105312:105505	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_017200

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_017201

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NC_017199

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection